DB29_00691 4ed374ae42899d671d7bf5ffd567f01f 369 Pfam PF08756 YfkB-like domain 217 366 1.6E-77 T 14-10-2018 IPR014866 YfkB-like domain DB29_00691 4ed374ae42899d671d7bf5ffd567f01f 369 TIGRFAM TIGR04478 rSAM_YfkAB: radical SAM/CxCxxxxC motif protein YfkAB 6 366 2.5E-196 T 14-10-2018 IPR031004 Radical SAM/CxCxxxxC motif protein YfkAB DB29_00691 4ed374ae42899d671d7bf5ffd567f01f 369 SUPERFAMILY SSF102114 31 324 4.32E-31 T 14-10-2018 DB29_00691 4ed374ae42899d671d7bf5ffd567f01f 369 Pfam PF04055 Radical SAM superfamily 33 186 1.8E-12 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 DB29_00691 4ed374ae42899d671d7bf5ffd567f01f 369 Pfam PF13353 4Fe-4S single cluster domain 39 115 2.3E-7 T 14-10-2018 DB29_00691 4ed374ae42899d671d7bf5ffd567f01f 369 Gene3D G3DSA:3.20.20.70 22 282 7.9E-23 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DB29_03619 18cd172fec8140bae74f219a93b21d2a 775 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 570 771 2.4E-96 T 14-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 DB29_03619 18cd172fec8140bae74f219a93b21d2a 775 SMART SM00464 9 201 2.3E-54 T 14-10-2018 IPR003111 Lon, substrate-binding domain DB29_03619 18cd172fec8140bae74f219a93b21d2a 775 TIGRFAM TIGR00763 lon: endopeptidase La 11 770 5.9E-299 T 14-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 DB29_03619 18cd172fec8140bae74f219a93b21d2a 775 SUPERFAMILY SSF52540 313 585 2.27E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_03619 18cd172fec8140bae74f219a93b21d2a 775 SUPERFAMILY SSF88697 9 199 1.81E-39 T 14-10-2018 IPR015947 PUA-like superfamily DB29_03619 18cd172fec8140bae74f219a93b21d2a 775 PIRSF PIRSF001174 1 774 0.0 T 14-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 DB29_03619 18cd172fec8140bae74f219a93b21d2a 775 SUPERFAMILY SSF54211 594 769 1.4E-55 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DB29_03619 18cd172fec8140bae74f219a93b21d2a 775 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 355 374 3.6E-54 T 14-10-2018 DB29_03619 18cd172fec8140bae74f219a93b21d2a 775 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 672 691 3.6E-54 T 14-10-2018 DB29_03619 18cd172fec8140bae74f219a93b21d2a 775 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 725 743 3.6E-54 T 14-10-2018 DB29_03619 18cd172fec8140bae74f219a93b21d2a 775 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 702 721 3.6E-54 T 14-10-2018 DB29_03619 18cd172fec8140bae74f219a93b21d2a 775 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 594 610 3.6E-54 T 14-10-2018 DB29_03619 18cd172fec8140bae74f219a93b21d2a 775 Gene3D G3DSA:1.10.8.60 491 583 4.2E-32 T 14-10-2018 DB29_03619 18cd172fec8140bae74f219a93b21d2a 775 Gene3D G3DSA:3.40.50.300 313 490 8.8E-68 T 14-10-2018 DB29_03619 18cd172fec8140bae74f219a93b21d2a 775 Gene3D G3DSA:1.20.58.1480 121 244 1.3E-36 T 14-10-2018 DB29_03619 18cd172fec8140bae74f219a93b21d2a 775 SMART SM00382 347 492 4.6E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_03619 18cd172fec8140bae74f219a93b21d2a 775 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 10 199 2.1E-38 T 14-10-2018 IPR003111 Lon, substrate-binding domain DB29_03619 18cd172fec8140bae74f219a93b21d2a 775 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 675 683 - T 14-10-2018 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 DB29_03619 18cd172fec8140bae74f219a93b21d2a 775 Gene3D G3DSA:3.30.230.10 592 775 6.3E-83 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DB29_03619 18cd172fec8140bae74f219a93b21d2a 775 Hamap MF_01973 Lon protease [lon]. 10 771 70.174 T 14-10-2018 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 DB29_03619 18cd172fec8140bae74f219a93b21d2a 775 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 351 487 1.3E-22 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 DB29_03619 18cd172fec8140bae74f219a93b21d2a 775 Gene3D G3DSA:2.30.130.40 5 116 8.1E-28 T 14-10-2018 DB29_00325 dc19b6d308046e456ff56ec0fb4f7983 138 SUPERFAMILY SSF53927 1 130 1.56E-45 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 DB29_00325 dc19b6d308046e456ff56ec0fb4f7983 138 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 3 101 4.9E-16 T 14-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain DB29_00325 dc19b6d308046e456ff56ec0fb4f7983 138 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 53 93 - T 14-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 DB29_00325 dc19b6d308046e456ff56ec0fb4f7983 138 TIGRFAM TIGR01354 cyt_deam_tetra: cytidine deaminase 5 129 2.7E-43 T 14-10-2018 IPR006262 Cytidine deaminase, homotetrameric GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199|Reactome: R-HSA-6798695|Reactome: R-HSA-73614 DB29_00325 dc19b6d308046e456ff56ec0fb4f7983 138 Gene3D G3DSA:3.40.140.10 1 132 6.0E-53 T 14-10-2018 DB29_00478 f4e1a8ea256c90aa7590c643809174e5 428 TIGRFAM TIGR03595 Obg_CgtA_exten: Obg family GTPase CgtA, C-terminal extension 358 427 5.2E-27 T 14-10-2018 IPR015349 GTP-binding protein OBG, C-terminal GO:0000166 DB29_00478 f4e1a8ea256c90aa7590c643809174e5 428 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 161 181 8.0E-35 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 DB29_00478 f4e1a8ea256c90aa7590c643809174e5 428 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 210 225 8.0E-35 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 DB29_00478 f4e1a8ea256c90aa7590c643809174e5 428 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 227 245 8.0E-35 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 DB29_00478 f4e1a8ea256c90aa7590c643809174e5 428 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 182 200 8.0E-35 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 DB29_00478 f4e1a8ea256c90aa7590c643809174e5 428 Gene3D G3DSA:2.70.210.12 1 157 1.4E-59 T 14-10-2018 IPR036726 GTP1/OBG domain superfamily DB29_00478 f4e1a8ea256c90aa7590c643809174e5 428 Hamap MF_01454 GTPase Obg [obg]. 1 329 47.823 T 14-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 DB29_00478 f4e1a8ea256c90aa7590c643809174e5 428 Gene3D G3DSA:3.40.50.300 158 341 4.5E-62 T 14-10-2018 DB29_00478 f4e1a8ea256c90aa7590c643809174e5 428 SUPERFAMILY SSF82051 1 157 1.44E-54 T 14-10-2018 IPR036726 GTP1/OBG domain superfamily DB29_00478 f4e1a8ea256c90aa7590c643809174e5 428 Pfam PF01926 50S ribosome-binding GTPase 160 283 2.4E-23 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 DB29_00478 f4e1a8ea256c90aa7590c643809174e5 428 Pfam PF09269 Domain of unknown function (DUF1967) 358 426 2.1E-26 T 14-10-2018 IPR015349 GTP-binding protein OBG, C-terminal GO:0000166 DB29_00478 f4e1a8ea256c90aa7590c643809174e5 428 Gene3D G3DSA:2.40.240.60 357 428 1.5E-21 T 14-10-2018 IPR036346 GTP-binding protein OBG, C-terminal domain superfamily DB29_00478 f4e1a8ea256c90aa7590c643809174e5 428 PIRSF PIRSF002401 1 372 1.8E-141 T 14-10-2018 IPR035101 GTP-binding protein, Obg-type DB29_00478 f4e1a8ea256c90aa7590c643809174e5 428 ProSitePatterns PS00905 GTP1/OBG family signature. 212 225 - T 14-10-2018 IPR006074 GTP1/OBG, conserved site GO:0005525 DB29_00478 f4e1a8ea256c90aa7590c643809174e5 428 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 160 320 6.0E-12 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 DB29_00478 f4e1a8ea256c90aa7590c643809174e5 428 Pfam PF01018 GTP1/OBG 3 157 5.1E-59 T 14-10-2018 IPR006169 GTP1/OBG domain DB29_00478 f4e1a8ea256c90aa7590c643809174e5 428 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 2 328 8.0E-143 T 14-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 DB29_00478 f4e1a8ea256c90aa7590c643809174e5 428 SUPERFAMILY SSF102741 357 428 1.83E-23 T 14-10-2018 IPR036346 GTP-binding protein OBG, C-terminal domain superfamily DB29_00478 f4e1a8ea256c90aa7590c643809174e5 428 SUPERFAMILY SSF52540 160 332 1.11E-51 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_04224 2bf60e526e85c320d85243e72be441ba 303 Pfam PF04233 Phage Mu protein F like protein 147 266 5.2E-27 T 14-10-2018 IPR006528 Phage head morphogenesis domain DB29_04224 2bf60e526e85c320d85243e72be441ba 303 TIGRFAM TIGR01641 phageSPP1_gp7: phage head morphogenesis protein, SPP1 gp7 family 153 235 7.2E-11 T 14-10-2018 IPR006528 Phage head morphogenesis domain DB29_00518 e725c83fe854b0eb1fb59bed48a853e6 453 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 152 166 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 DB29_00518 e725c83fe854b0eb1fb59bed48a853e6 453 SUPERFAMILY SSF51246 330 447 2.41E-37 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 DB29_00518 e725c83fe854b0eb1fb59bed48a853e6 453 SUPERFAMILY SSF56059 83 350 1.29E-70 T 14-10-2018 DB29_00518 e725c83fe854b0eb1fb59bed48a853e6 453 SMART SM00878 335 440 3.3E-49 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 DB29_00518 e725c83fe854b0eb1fb59bed48a853e6 453 Gene3D G3DSA:3.40.50.20 1 85 3.6E-35 T 14-10-2018 DB29_00518 e725c83fe854b0eb1fb59bed48a853e6 453 Gene3D G3DSA:3.30.1490.20 131 201 6.1E-148 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 DB29_00518 e725c83fe854b0eb1fb59bed48a853e6 453 SUPERFAMILY SSF52440 2 113 1.15E-46 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily DB29_00518 e725c83fe854b0eb1fb59bed48a853e6 453 Gene3D G3DSA:3.30.470.20 87 439 6.1E-148 T 14-10-2018 DB29_00518 e725c83fe854b0eb1fb59bed48a853e6 453 Pfam PF00289 Biotin carboxylase, N-terminal domain 2 110 3.1E-44 T 14-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 DB29_00518 e725c83fe854b0eb1fb59bed48a853e6 453 Pfam PF02785 Biotin carboxylase C-terminal domain 335 440 4.0E-34 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 DB29_00518 e725c83fe854b0eb1fb59bed48a853e6 453 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 321 1.2E-71 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 DB29_00518 e725c83fe854b0eb1fb59bed48a853e6 453 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 285 292 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 DB29_00702 8b2f19dc4eac4cde819e2d150fb9af5a 434 SUPERFAMILY SSF51905 189 350 4.54E-5 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB29_00702 8b2f19dc4eac4cde819e2d150fb9af5a 434 SUPERFAMILY SSF51905 1 238 2.0E-17 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB29_00702 8b2f19dc4eac4cde819e2d150fb9af5a 434 Gene3D G3DSA:3.50.50.60 1 423 2.2E-106 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB29_00702 8b2f19dc4eac4cde819e2d150fb9af5a 434 Pfam PF13434 L-lysine 6-monooxygenase (NADPH-requiring) 4 339 4.1E-112 T 14-10-2018 IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase DB29_02483 c2861995128413142bf028384a2256ca 214 Gene3D G3DSA:3.40.50.720 70 196 1.7E-12 T 14-10-2018 DB29_02483 c2861995128413142bf028384a2256ca 214 Pfam PF01370 NAD dependent epimerase/dehydratase family 4 74 5.2E-5 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 DB29_02483 c2861995128413142bf028384a2256ca 214 SUPERFAMILY SSF51735 2 192 3.58E-15 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_00629 f487217b35fe9e7f408c8f0fb9852adf 615 Pfam PF00874 PRD domain 308 396 6.6E-9 T 14-10-2018 IPR011608 PRD domain GO:0006355 DB29_00629 f487217b35fe9e7f408c8f0fb9852adf 615 Gene3D G3DSA:1.10.1790.10 300 401 1.3E-8 T 14-10-2018 DB29_00629 f487217b35fe9e7f408c8f0fb9852adf 615 Pfam PF05043 Mga helix-turn-helix domain 98 162 3.5E-6 T 14-10-2018 IPR007737 Mga helix-turn-helix domain DB29_00629 f487217b35fe9e7f408c8f0fb9852adf 615 Gene3D G3DSA:3.40.50.2300 408 495 1.4E-8 T 14-10-2018 DB29_00629 f487217b35fe9e7f408c8f0fb9852adf 615 Gene3D G3DSA:1.10.10.10 78 154 1.4E-8 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_00629 f487217b35fe9e7f408c8f0fb9852adf 615 Gene3D G3DSA:1.10.10.10 1 65 4.5E-6 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_00629 f487217b35fe9e7f408c8f0fb9852adf 615 SUPERFAMILY SSF46785 93 154 4.21E-6 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_00629 f487217b35fe9e7f408c8f0fb9852adf 615 SUPERFAMILY SSF63520 300 396 2.88E-12 T 14-10-2018 IPR036634 PRD domain superfamily GO:0006355 DB29_00629 f487217b35fe9e7f408c8f0fb9852adf 615 SUPERFAMILY SSF52794 407 490 2.35E-7 T 14-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 DB29_02345 fe47c63c1949be2cd657d6af14264350 181 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 6 177 4.7E-48 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DB29_02345 fe47c63c1949be2cd657d6af14264350 181 Hamap MF_01416 ATP synthase subunit delta [atpD]. 2 179 20.014 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DB29_02345 fe47c63c1949be2cd657d6af14264350 181 SUPERFAMILY SSF47928 2 106 2.22E-21 T 14-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DB29_02345 fe47c63c1949be2cd657d6af14264350 181 Pfam PF00213 ATP synthase delta (OSCP) subunit 6 177 1.7E-49 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DB29_02345 fe47c63c1949be2cd657d6af14264350 181 Gene3D G3DSA:1.10.520.20 5 99 3.2E-13 T 14-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DB29_02345 fe47c63c1949be2cd657d6af14264350 181 ProSitePatterns PS00389 ATP synthase delta (OSCP) subunit signature. 139 158 - T 14-10-2018 IPR020781 ATPase, OSCP/delta subunit, conserved site GO:0015986|GO:0016020|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DB29_02345 fe47c63c1949be2cd657d6af14264350 181 PRINTS PR00125 ATP synthase delta subunit signature 6 25 2.8E-26 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DB29_02345 fe47c63c1949be2cd657d6af14264350 181 PRINTS PR00125 ATP synthase delta subunit signature 75 86 2.8E-26 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DB29_02345 fe47c63c1949be2cd657d6af14264350 181 PRINTS PR00125 ATP synthase delta subunit signature 86 100 2.8E-26 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DB29_02345 fe47c63c1949be2cd657d6af14264350 181 PRINTS PR00125 ATP synthase delta subunit signature 152 170 2.8E-26 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DB29_02345 fe47c63c1949be2cd657d6af14264350 181 PRINTS PR00125 ATP synthase delta subunit signature 137 152 2.8E-26 T 14-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DB29_00133 8f8ad78dbfcadd50810de840660bfc7c 406 Gene3D G3DSA:3.40.50.2000 197 364 1.1E-36 T 14-10-2018 DB29_00133 8f8ad78dbfcadd50810de840660bfc7c 406 SUPERFAMILY SSF53756 1 380 4.97E-78 T 14-10-2018 DB29_00133 8f8ad78dbfcadd50810de840660bfc7c 406 Pfam PF13439 Glycosyltransferase Family 4 15 182 8.9E-36 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 DB29_00133 8f8ad78dbfcadd50810de840660bfc7c 406 Pfam PF00534 Glycosyl transferases group 1 198 360 8.2E-34 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 DB29_00133 8f8ad78dbfcadd50810de840660bfc7c 406 Gene3D G3DSA:3.40.50.2000 1 196 2.3E-41 T 14-10-2018 DB29_00251 786995c5641b6e545b64922415747933 321 SUPERFAMILY SSF47384 82 150 1.22E-12 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DB29_00251 786995c5641b6e545b64922415747933 321 PRINTS PR00344 Bacterial sensor protein C-terminal signature 287 300 1.1E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB29_00251 786995c5641b6e545b64922415747933 321 PRINTS PR00344 Bacterial sensor protein C-terminal signature 263 281 1.1E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB29_00251 786995c5641b6e545b64922415747933 321 PRINTS PR00344 Bacterial sensor protein C-terminal signature 234 248 1.1E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB29_00251 786995c5641b6e545b64922415747933 321 PRINTS PR00344 Bacterial sensor protein C-terminal signature 252 262 1.1E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB29_00251 786995c5641b6e545b64922415747933 321 Gene3D G3DSA:1.10.287.130 78 151 7.6E-13 T 14-10-2018 DB29_00251 786995c5641b6e545b64922415747933 321 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 199 302 2.1E-21 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DB29_00251 786995c5641b6e545b64922415747933 321 SUPERFAMILY SSF55874 155 304 1.31E-33 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB29_00251 786995c5641b6e545b64922415747933 321 SMART SM00387 197 303 2.1E-25 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DB29_00251 786995c5641b6e545b64922415747933 321 SMART SM00388 92 155 1.2E-11 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DB29_00251 786995c5641b6e545b64922415747933 321 Pfam PF00512 His Kinase A (phospho-acceptor) domain 94 150 1.4E-12 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DB29_00251 786995c5641b6e545b64922415747933 321 Gene3D G3DSA:3.30.565.10 157 311 3.5E-34 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB29_01762 cdb097e8d3cfb63cfe36994aaac4bbb2 580 SUPERFAMILY SSF90123 12 325 5.1E-67 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DB29_01762 cdb097e8d3cfb63cfe36994aaac4bbb2 580 Gene3D G3DSA:1.20.1560.10 6 328 2.2E-74 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DB29_01762 cdb097e8d3cfb63cfe36994aaac4bbb2 580 Pfam PF00005 ABC transporter 357 506 3.8E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB29_01762 cdb097e8d3cfb63cfe36994aaac4bbb2 580 SUPERFAMILY SSF52540 337 576 7.37E-84 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_01762 cdb097e8d3cfb63cfe36994aaac4bbb2 580 SMART SM00382 366 552 3.3E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_01762 cdb097e8d3cfb63cfe36994aaac4bbb2 580 ProSitePatterns PS00211 ABC transporters family signature. 478 492 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB29_01762 cdb097e8d3cfb63cfe36994aaac4bbb2 580 Pfam PF00664 ABC transporter transmembrane region 29 295 2.2E-38 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 DB29_01762 cdb097e8d3cfb63cfe36994aaac4bbb2 580 Gene3D G3DSA:3.40.50.300 333 579 6.7E-87 T 14-10-2018 DB29_02227 2b38a76888dce8e8496eb816ceac54c7 386 Gene3D G3DSA:3.30.1050.10 281 376 1.1E-116 T 14-10-2018 IPR036527 SCP2 sterol-binding domain superfamily DB29_02227 2b38a76888dce8e8496eb816ceac54c7 386 Pfam PF13527 Acetyltransferase (GNAT) domain 3 126 5.4E-38 T 14-10-2018 DB29_02227 2b38a76888dce8e8496eb816ceac54c7 386 Pfam PF13530 Sterol carrier protein domain 171 382 1.1E-49 T 14-10-2018 IPR025559 Enhanced intracellular survival protein domain DB29_02227 2b38a76888dce8e8496eb816ceac54c7 386 Gene3D G3DSA:3.40.630.30 127 386 1.1E-116 T 14-10-2018 DB29_02227 2b38a76888dce8e8496eb816ceac54c7 386 SUPERFAMILY SSF55718 280 386 1.77E-25 T 14-10-2018 IPR036527 SCP2 sterol-binding domain superfamily DB29_02227 2b38a76888dce8e8496eb816ceac54c7 386 SUPERFAMILY SSF55729 1 279 3.29E-64 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase DB29_02227 2b38a76888dce8e8496eb816ceac54c7 386 Gene3D G3DSA:3.40.630.30 9 280 1.1E-116 T 14-10-2018 DB29_02102 1dd045c39c9cfdef01da8585d093dbd7 932 SUPERFAMILY SSF52540 109 351 2.91E-39 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_02102 1dd045c39c9cfdef01da8585d093dbd7 932 SUPERFAMILY SSF63520 826 924 1.27E-15 T 14-10-2018 IPR036634 PRD domain superfamily GO:0006355 DB29_02102 1dd045c39c9cfdef01da8585d093dbd7 932 Gene3D G3DSA:1.10.1790.10 832 926 1.3E-8 T 14-10-2018 DB29_02102 1dd045c39c9cfdef01da8585d093dbd7 932 Gene3D G3DSA:3.40.50.300 98 285 1.1E-41 T 14-10-2018 DB29_02102 1dd045c39c9cfdef01da8585d093dbd7 932 Gene3D G3DSA:3.40.50.510 572 700 2.5E-32 T 14-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 DB29_02102 1dd045c39c9cfdef01da8585d093dbd7 932 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 136 149 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 DB29_02102 1dd045c39c9cfdef01da8585d093dbd7 932 Pfam PF03610 PTS system fructose IIA component 579 666 2.0E-5 T 14-10-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 DB29_02102 1dd045c39c9cfdef01da8585d093dbd7 932 Pfam PF00158 Sigma-54 interaction domain 110 274 4.1E-44 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 DB29_02102 1dd045c39c9cfdef01da8585d093dbd7 932 SMART SM00382 132 282 1.7E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_02102 1dd045c39c9cfdef01da8585d093dbd7 932 SUPERFAMILY SSF53062 576 700 1.92E-16 T 14-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 DB29_02102 1dd045c39c9cfdef01da8585d093dbd7 932 Pfam PF00874 PRD domain 843 925 2.9E-12 T 14-10-2018 IPR011608 PRD domain GO:0006355 DB29_01018 ef825dc49de139390170f4cd4e6ac57d 68 Gene3D G3DSA:1.10.260.40 2 67 1.4E-27 T 14-10-2018 DB29_01018 ef825dc49de139390170f4cd4e6ac57d 68 SUPERFAMILY SSF47413 1 67 5.09E-18 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DB29_01018 ef825dc49de139390170f4cd4e6ac57d 68 SMART SM00530 6 61 2.6E-14 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DB29_01018 ef825dc49de139390170f4cd4e6ac57d 68 Pfam PF01381 Helix-turn-helix 8 60 5.8E-13 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DB29_00249 1e79d99bda4499b951f5a2d729ecc86c 171 SUPERFAMILY SSF141523 29 153 1.01E-27 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like DB29_00249 1e79d99bda4499b951f5a2d729ecc86c 171 Gene3D G3DSA:2.40.440.10 13 169 3.3E-37 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like DB29_00249 1e79d99bda4499b951f5a2d729ecc86c 171 Pfam PF03734 L,D-transpeptidase catalytic domain 31 153 1.2E-20 T 14-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 DB29_04315 f6338a85aae9fe20bc982554f8687028 414 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 43 56 - T 14-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 DB29_04315 f6338a85aae9fe20bc982554f8687028 414 Gene3D G3DSA:3.40.1020.10 322 414 8.6E-10 T 14-10-2018 IPR038110 Threonine dehydratase, ACT-like domain superfamily KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 DB29_04315 f6338a85aae9fe20bc982554f8687028 414 TIGRFAM TIGR02079 THD1: threonine dehydratase 6 414 1.9E-198 T 14-10-2018 IPR011820 L-threonine dehydratase biosynthetic IlvA GO:0004794 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 DB29_04315 f6338a85aae9fe20bc982554f8687028 414 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 321 412 7.9E-28 T 14-10-2018 IPR001721 Threonine dehydratase, ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 DB29_04315 f6338a85aae9fe20bc982554f8687028 414 SUPERFAMILY SSF53686 4 357 1.44E-100 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme DB29_04315 f6338a85aae9fe20bc982554f8687028 414 Gene3D G3DSA:3.40.50.1100 16 319 7.3E-119 T 14-10-2018 DB29_04315 f6338a85aae9fe20bc982554f8687028 414 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 17 308 4.6E-76 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme DB29_04315 f6338a85aae9fe20bc982554f8687028 414 Gene3D G3DSA:3.40.50.1100 51 150 7.3E-119 T 14-10-2018 DB29_04315 f6338a85aae9fe20bc982554f8687028 414 SUPERFAMILY SSF55021 331 408 2.06E-11 T 14-10-2018 DB29_02085 db05972c566a94feeb2e4540448d480a 612 Gene3D G3DSA:3.30.450.20 276 372 5.1E-22 T 14-10-2018 DB29_02085 db05972c566a94feeb2e4540448d480a 612 SUPERFAMILY SSF55874 437 604 1.11E-50 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB29_02085 db05972c566a94feeb2e4540448d480a 612 SMART SM00388 381 448 2.1E-23 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DB29_02085 db05972c566a94feeb2e4540448d480a 612 SUPERFAMILY SSF55785 265 373 2.09E-12 T 14-10-2018 IPR035965 PAS domain superfamily DB29_02085 db05972c566a94feeb2e4540448d480a 612 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 495 604 5.2E-26 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DB29_02085 db05972c566a94feeb2e4540448d480a 612 Gene3D G3DSA:1.10.287.130 373 453 1.1E-29 T 14-10-2018 DB29_02085 db05972c566a94feeb2e4540448d480a 612 Gene3D G3DSA:3.30.450.20 33 187 1.3E-22 T 14-10-2018 DB29_02085 db05972c566a94feeb2e4540448d480a 612 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 266 381 3.8E-10 T 14-10-2018 IPR000014 PAS domain DB29_02085 db05972c566a94feeb2e4540448d480a 612 SUPERFAMILY SSF47384 367 449 1.26E-20 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DB29_02085 db05972c566a94feeb2e4540448d480a 612 SMART SM00387 494 606 1.5E-40 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DB29_02085 db05972c566a94feeb2e4540448d480a 612 SMART SM00304 209 261 8.3E-12 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DB29_02085 db05972c566a94feeb2e4540448d480a 612 PRINTS PR00344 Bacterial sensor protein C-terminal signature 531 545 1.7E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB29_02085 db05972c566a94feeb2e4540448d480a 612 PRINTS PR00344 Bacterial sensor protein C-terminal signature 590 603 1.7E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB29_02085 db05972c566a94feeb2e4540448d480a 612 PRINTS PR00344 Bacterial sensor protein C-terminal signature 549 559 1.7E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB29_02085 db05972c566a94feeb2e4540448d480a 612 PRINTS PR00344 Bacterial sensor protein C-terminal signature 566 584 1.7E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB29_02085 db05972c566a94feeb2e4540448d480a 612 SMART SM00091 268 334 4.2E-8 T 14-10-2018 IPR000014 PAS domain DB29_02085 db05972c566a94feeb2e4540448d480a 612 SUPERFAMILY SSF158472 209 258 1.11E-9 T 14-10-2018 DB29_02085 db05972c566a94feeb2e4540448d480a 612 Gene3D G3DSA:1.10.8.500 208 258 8.7E-7 T 14-10-2018 DB29_02085 db05972c566a94feeb2e4540448d480a 612 Pfam PF00672 HAMP domain 209 258 7.0E-11 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DB29_02085 db05972c566a94feeb2e4540448d480a 612 Pfam PF00512 His Kinase A (phospho-acceptor) domain 382 447 1.7E-19 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DB29_02085 db05972c566a94feeb2e4540448d480a 612 Gene3D G3DSA:3.30.565.10 455 608 4.1E-48 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB29_02085 db05972c566a94feeb2e4540448d480a 612 Pfam PF00989 PAS fold 269 357 4.5E-11 T 14-10-2018 IPR013767 PAS fold GO:0006355 DB29_02854 bf6c808af5ca6d1d111d2120c2cc2e55 435 Pfam PF03471 Transporter associated domain 352 424 1.1E-15 T 14-10-2018 IPR005170 Transporter-associated domain DB29_02854 bf6c808af5ca6d1d111d2120c2cc2e55 435 Gene3D G3DSA:3.30.465.10 345 425 5.9E-16 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 DB29_02854 bf6c808af5ca6d1d111d2120c2cc2e55 435 SMART SM00116 287 335 10.0 T 14-10-2018 IPR000644 CBS domain DB29_02854 bf6c808af5ca6d1d111d2120c2cc2e55 435 SMART SM00116 223 272 4.2E-4 T 14-10-2018 IPR000644 CBS domain DB29_02854 bf6c808af5ca6d1d111d2120c2cc2e55 435 Gene3D G3DSA:3.10.580.10 193 344 1.1E-49 T 14-10-2018 DB29_02854 bf6c808af5ca6d1d111d2120c2cc2e55 435 SUPERFAMILY SSF54631 204 345 6.7E-33 T 14-10-2018 DB29_02854 bf6c808af5ca6d1d111d2120c2cc2e55 435 SUPERFAMILY SSF56176 346 426 4.91E-16 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 DB29_02854 bf6c808af5ca6d1d111d2120c2cc2e55 435 Pfam PF01595 Domain of unknown function DUF21 7 199 2.8E-48 T 14-10-2018 IPR002550 CNNM, transmembrane domain DB29_02854 bf6c808af5ca6d1d111d2120c2cc2e55 435 SMART SM01091 351 428 2.7E-18 T 14-10-2018 IPR005170 Transporter-associated domain DB29_02854 bf6c808af5ca6d1d111d2120c2cc2e55 435 Pfam PF00571 CBS domain 282 335 3.0E-6 T 14-10-2018 IPR000644 CBS domain DB29_02854 bf6c808af5ca6d1d111d2120c2cc2e55 435 Pfam PF00571 CBS domain 215 272 4.4E-8 T 14-10-2018 IPR000644 CBS domain DB29_04046 8c94c1aa31ebe021e745610452d9e399 368 Pfam PF00575 S1 RNA binding domain 133 195 6.3E-12 T 14-10-2018 IPR003029 S1 domain GO:0003676 DB29_04046 8c94c1aa31ebe021e745610452d9e399 368 Pfam PF08529 NusA N-terminal domain 4 123 1.3E-43 T 14-10-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 DB29_04046 8c94c1aa31ebe021e745610452d9e399 368 SMART SM00322 303 360 13.0 T 14-10-2018 IPR004087 K Homology domain GO:0003676 DB29_04046 8c94c1aa31ebe021e745610452d9e399 368 SMART SM00322 229 302 0.0011 T 14-10-2018 IPR004087 K Homology domain GO:0003676 DB29_04046 8c94c1aa31ebe021e745610452d9e399 368 Pfam PF13184 NusA-like KH domain 229 297 2.2E-30 T 14-10-2018 IPR025249 KH domain, NusA-like GO:0003723 DB29_04046 8c94c1aa31ebe021e745610452d9e399 368 Gene3D G3DSA:3.30.300.20 277 368 5.4E-33 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta DB29_04046 8c94c1aa31ebe021e745610452d9e399 368 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 365 30.27 T 14-10-2018 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 DB29_04046 8c94c1aa31ebe021e745610452d9e399 368 Gene3D G3DSA:3.30.1480.10 1 124 9.0E-48 T 14-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 DB29_04046 8c94c1aa31ebe021e745610452d9e399 368 SUPERFAMILY SSF69705 1 126 1.44E-42 T 14-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 DB29_04046 8c94c1aa31ebe021e745610452d9e399 368 SUPERFAMILY SSF54814 199 277 1.96E-30 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 DB29_04046 8c94c1aa31ebe021e745610452d9e399 368 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 4 341 5.3E-129 T 14-10-2018 IPR010213 Transcription termination factor NusA GO:0003723 DB29_04046 8c94c1aa31ebe021e745610452d9e399 368 SMART SM00316 133 199 1.0E-10 T 14-10-2018 IPR022967 RNA-binding domain, S1 DB29_04046 8c94c1aa31ebe021e745610452d9e399 368 SUPERFAMILY SSF50249 132 198 1.79E-20 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DB29_04046 8c94c1aa31ebe021e745610452d9e399 368 Gene3D G3DSA:3.30.300.20 198 276 1.4E-34 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta DB29_04046 8c94c1aa31ebe021e745610452d9e399 368 Gene3D G3DSA:2.40.50.140 136 197 1.1E-25 T 14-10-2018 DB29_04046 8c94c1aa31ebe021e745610452d9e399 368 SUPERFAMILY SSF54814 278 342 6.54E-16 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 DB29_02949 3754156419e2854fcc949b61ef665539 447 Hamap MF_00372 Imidazolonepropionase [hutI]. 4 417 43.061 T 14-10-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 DB29_02949 3754156419e2854fcc949b61ef665539 447 Gene3D G3DSA:2.30.40.10 8 415 5.3E-171 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DB29_02949 3754156419e2854fcc949b61ef665539 447 SUPERFAMILY SSF51556 79 378 1.56E-85 T 14-10-2018 IPR032466 Metal-dependent hydrolase DB29_02949 3754156419e2854fcc949b61ef665539 447 TIGRFAM TIGR01224 hutI: imidazolonepropionase 36 416 4.8E-153 T 14-10-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 DB29_02949 3754156419e2854fcc949b61ef665539 447 Pfam PF01979 Amidohydrolase family 76 417 3.3E-25 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 DB29_02949 3754156419e2854fcc949b61ef665539 447 Gene3D G3DSA:3.20.20.140 80 377 5.3E-171 T 14-10-2018 DB29_02949 3754156419e2854fcc949b61ef665539 447 SUPERFAMILY SSF51338 35 420 5.01E-18 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DB29_0P0033 c95e8692d7d98803fee707659cfe0d7c 143 Pfam PF01381 Helix-turn-helix 12 64 1.3E-15 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DB29_0P0033 c95e8692d7d98803fee707659cfe0d7c 143 Gene3D G3DSA:1.10.260.40 2 81 1.6E-19 T 14-10-2018 DB29_0P0033 c95e8692d7d98803fee707659cfe0d7c 143 SMART SM00530 11 66 1.9E-14 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DB29_0P0033 c95e8692d7d98803fee707659cfe0d7c 143 SUPERFAMILY SSF47413 3 70 3.75E-18 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DB29_01938 87269a688df80a21d13f496d1b632cfc 122 SMART SM00905 5 118 1.3E-50 T 14-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 DB29_01938 87269a688df80a21d13f496d1b632cfc 122 SUPERFAMILY SSF55620 1 120 1.33E-39 T 14-10-2018 DB29_01938 87269a688df80a21d13f496d1b632cfc 122 Gene3D G3DSA:3.30.1130.10 1 121 8.6E-44 T 14-10-2018 DB29_01938 87269a688df80a21d13f496d1b632cfc 122 TIGRFAM TIGR00526 folB_dom: FolB domain 3 120 2.6E-35 T 14-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 DB29_01938 87269a688df80a21d13f496d1b632cfc 122 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 3 118 2.0E-38 T 14-10-2018 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 DB29_01938 87269a688df80a21d13f496d1b632cfc 122 Pfam PF02152 Dihydroneopterin aldolase 5 117 1.6E-34 T 14-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 DB29_00890 8ed9690b61d45f722e1bc07da5e93141 629 Gene3D G3DSA:3.40.50.920 500 622 9.3E-42 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 DB29_00890 8ed9690b61d45f722e1bc07da5e93141 629 ProSitePatterns PS00802 Transketolase signature 2. 428 444 - T 14-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 DB29_00890 8ed9690b61d45f722e1bc07da5e93141 629 TIGRFAM TIGR00232 tktlase_bact: transketolase 1 625 2.3E-267 T 14-10-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 DB29_00890 8ed9690b61d45f722e1bc07da5e93141 629 SUPERFAMILY SSF52518 1 287 2.36E-102 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold DB29_00890 8ed9690b61d45f722e1bc07da5e93141 629 Gene3D G3DSA:3.40.50.970 1 295 3.7E-113 T 14-10-2018 DB29_00890 8ed9690b61d45f722e1bc07da5e93141 629 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 1 300 1.6E-131 T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 DB29_00890 8ed9690b61d45f722e1bc07da5e93141 629 Gene3D G3DSA:3.40.50.970 296 496 1.5E-79 T 14-10-2018 DB29_00890 8ed9690b61d45f722e1bc07da5e93141 629 Pfam PF02780 Transketolase, C-terminal domain 515 617 2.5E-8 T 14-10-2018 IPR033248 Transketolase, C-terminal domain DB29_00890 8ed9690b61d45f722e1bc07da5e93141 629 SMART SM00861 316 486 1.9E-69 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain DB29_00890 8ed9690b61d45f722e1bc07da5e93141 629 SUPERFAMILY SSF52518 302 487 2.07E-67 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold DB29_00890 8ed9690b61d45f722e1bc07da5e93141 629 Pfam PF02779 Transketolase, pyrimidine binding domain 315 485 1.5E-44 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain DB29_00890 8ed9690b61d45f722e1bc07da5e93141 629 SUPERFAMILY SSF52922 495 627 3.4E-39 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 DB29_02891 2645dc0e882d42ce2275a2e58f631df3 498 SUPERFAMILY SSF53067 5 255 6.48E-98 T 14-10-2018 DB29_02891 2645dc0e882d42ce2275a2e58f631df3 498 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 262 450 2.0E-59 T 14-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 DB29_02891 2645dc0e882d42ce2275a2e58f631df3 498 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 5 252 3.2E-88 T 14-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 DB29_02891 2645dc0e882d42ce2275a2e58f631df3 498 SUPERFAMILY SSF53067 255 493 1.04E-84 T 14-10-2018 DB29_02891 2645dc0e882d42ce2275a2e58f631df3 498 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 135 147 - T 14-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 DB29_02891 2645dc0e882d42ce2275a2e58f631df3 498 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 362 382 - T 14-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 DB29_02891 2645dc0e882d42ce2275a2e58f631df3 498 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 4 495 2.0E-226 T 14-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 DB29_02891 2645dc0e882d42ce2275a2e58f631df3 498 PIRSF PIRSF000538 3 498 1.8E-180 T 14-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 DB29_02891 2645dc0e882d42ce2275a2e58f631df3 498 Gene3D G3DSA:3.30.420.40 254 498 8.3E-91 T 14-10-2018 DB29_02891 2645dc0e882d42ce2275a2e58f631df3 498 Hamap MF_00186 Glycerol kinase [glpK]. 3 497 59.095 T 14-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 DB29_02891 2645dc0e882d42ce2275a2e58f631df3 498 Gene3D G3DSA:3.30.420.40 1 253 2.3E-113 T 14-10-2018 DB29_01796 5c3db53fb8517c7656f10cacf2c2358b 709 SUPERFAMILY SSF81653 198 295 4.71E-27 T 14-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 DB29_01796 5c3db53fb8517c7656f10cacf2c2358b 709 ProSitePatterns PS01229 Hypothetical cof family signature 2. 601 623 - T 14-10-2018 DB29_01796 5c3db53fb8517c7656f10cacf2c2358b 709 Pfam PF00702 haloacid dehalogenase-like hydrolase 393 614 3.9E-45 T 14-10-2018 DB29_01796 5c3db53fb8517c7656f10cacf2c2358b 709 Pfam PF00122 E1-E2 ATPase 197 376 9.7E-55 T 14-10-2018 DB29_01796 5c3db53fb8517c7656f10cacf2c2358b 709 SUPERFAMILY SSF55008 5 59 3.27E-11 T 14-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 DB29_01796 5c3db53fb8517c7656f10cacf2c2358b 709 SUPERFAMILY SSF56784 395 702 1.55E-55 T 14-10-2018 IPR036412 HAD-like superfamily DB29_01796 5c3db53fb8517c7656f10cacf2c2358b 709 Gene3D G3DSA:3.40.1110.10 407 532 3.9E-87 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 DB29_01796 5c3db53fb8517c7656f10cacf2c2358b 709 ProSitePatterns PS01047 Heavy-metal-associated domain. 11 40 - T 14-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 DB29_01796 5c3db53fb8517c7656f10cacf2c2358b 709 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 130 704 6.3E-123 T 14-10-2018 DB29_01796 5c3db53fb8517c7656f10cacf2c2358b 709 Gene3D G3DSA:3.30.70.100 5 72 1.9E-17 T 14-10-2018 DB29_01796 5c3db53fb8517c7656f10cacf2c2358b 709 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 398 404 - T 14-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 DB29_01796 5c3db53fb8517c7656f10cacf2c2358b 709 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 625 637 1.4E-23 T 14-10-2018 DB29_01796 5c3db53fb8517c7656f10cacf2c2358b 709 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 396 410 1.4E-23 T 14-10-2018 DB29_01796 5c3db53fb8517c7656f10cacf2c2358b 709 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 245 259 1.4E-23 T 14-10-2018 DB29_01796 5c3db53fb8517c7656f10cacf2c2358b 709 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 525 536 1.4E-23 T 14-10-2018 DB29_01796 5c3db53fb8517c7656f10cacf2c2358b 709 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 548 558 1.4E-23 T 14-10-2018 DB29_01796 5c3db53fb8517c7656f10cacf2c2358b 709 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 601 620 1.4E-23 T 14-10-2018 DB29_01796 5c3db53fb8517c7656f10cacf2c2358b 709 Gene3D G3DSA:2.70.150.20 188 300 1.0E-36 T 14-10-2018 DB29_01796 5c3db53fb8517c7656f10cacf2c2358b 709 Gene3D G3DSA:3.40.50.1000 377 654 3.9E-87 T 14-10-2018 IPR023214 HAD superfamily DB29_01796 5c3db53fb8517c7656f10cacf2c2358b 709 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 145 704 7.9E-186 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 DB29_01796 5c3db53fb8517c7656f10cacf2c2358b 709 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 146 449 2.0E-95 T 14-10-2018 DB29_01796 5c3db53fb8517c7656f10cacf2c2358b 709 SUPERFAMILY SSF81665 147 696 1.7E-20 T 14-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 DB29_01796 5c3db53fb8517c7656f10cacf2c2358b 709 PRINTS PR00941 Cadmium-transporting ATPase signature 200 216 1.2E-76 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 DB29_01796 5c3db53fb8517c7656f10cacf2c2358b 709 PRINTS PR00941 Cadmium-transporting ATPase signature 9 18 1.2E-76 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 DB29_01796 5c3db53fb8517c7656f10cacf2c2358b 709 PRINTS PR00941 Cadmium-transporting ATPase signature 42 65 1.2E-76 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 DB29_01796 5c3db53fb8517c7656f10cacf2c2358b 709 PRINTS PR00941 Cadmium-transporting ATPase signature 126 138 1.2E-76 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 DB29_01796 5c3db53fb8517c7656f10cacf2c2358b 709 PRINTS PR00941 Cadmium-transporting ATPase signature 20 41 1.2E-76 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 DB29_01796 5c3db53fb8517c7656f10cacf2c2358b 709 PRINTS PR00941 Cadmium-transporting ATPase signature 280 294 1.2E-76 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 DB29_01796 5c3db53fb8517c7656f10cacf2c2358b 709 PRINTS PR00941 Cadmium-transporting ATPase signature 261 277 1.2E-76 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 DB29_01796 5c3db53fb8517c7656f10cacf2c2358b 709 PRINTS PR00941 Cadmium-transporting ATPase signature 109 126 1.2E-76 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 DB29_01796 5c3db53fb8517c7656f10cacf2c2358b 709 PRINTS PR00941 Cadmium-transporting ATPase signature 180 200 1.2E-76 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 DB29_01796 5c3db53fb8517c7656f10cacf2c2358b 709 Pfam PF00403 Heavy-metal-associated domain 8 58 2.8E-12 T 14-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 DB29_01796 5c3db53fb8517c7656f10cacf2c2358b 709 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 168 684 1.0E-92 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 DB29_01087 b7c79df9a79d34dc77900a067d3dde97 277 Gene3D G3DSA:3.40.190.10 31 255 6.2E-55 T 14-10-2018 DB29_01087 b7c79df9a79d34dc77900a067d3dde97 277 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 25 257 2.4E-40 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DB29_01087 b7c79df9a79d34dc77900a067d3dde97 277 SUPERFAMILY SSF53850 25 258 1.93E-36 T 14-10-2018 DB29_01087 b7c79df9a79d34dc77900a067d3dde97 277 Gene3D G3DSA:3.40.190.10 111 217 6.2E-55 T 14-10-2018 DB29_01087 b7c79df9a79d34dc77900a067d3dde97 277 SMART SM00062 24 261 2.1E-28 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DB29_01087 b7c79df9a79d34dc77900a067d3dde97 277 TIGRFAM TIGR02995 ectoine_ehuB: ectoine/hydroxyectoine ABC transporter solute-binding protein EhuB 24 265 9.6E-62 T 14-10-2018 IPR014337 Ectoine/Hydroxyectoine ABC transporter, substrate-binding protein EhuB GO:0033294|GO:0051470 DB29_00500 e02a9e35d66085a89f4a25ba898cd85f 348 SUPERFAMILY SSF50249 60 126 5.54E-6 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DB29_00500 e02a9e35d66085a89f4a25ba898cd85f 348 SUPERFAMILY SSF109604 167 308 2.2E-13 T 14-10-2018 DB29_00500 e02a9e35d66085a89f4a25ba898cd85f 348 Hamap MF_01427 3'-5' exoribonuclease YhaM [yhaM]. 30 342 65.087 T 14-10-2018 IPR020873 3'-5' exoribonuclease YhaM GO:0000175 DB29_00500 e02a9e35d66085a89f4a25ba898cd85f 348 Gene3D G3DSA:2.40.50.140 52 131 3.4E-6 T 14-10-2018 DB29_00500 e02a9e35d66085a89f4a25ba898cd85f 348 Pfam PF01966 HD domain 192 307 3.1E-10 T 14-10-2018 IPR006674 HD domain DB29_00500 e02a9e35d66085a89f4a25ba898cd85f 348 Gene3D G3DSA:1.10.3210.10 151 324 1.5E-10 T 14-10-2018 DB29_02304 55605c79c3f216d6cae8e3df3e50a814 556 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 8 556 2.0E-167 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 DB29_02304 55605c79c3f216d6cae8e3df3e50a814 556 Pfam PF05746 DALR anticodon binding domain 437 556 2.0E-38 T 14-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 DB29_02304 55605c79c3f216d6cae8e3df3e50a814 556 SMART SM00836 437 556 2.3E-57 T 14-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 DB29_02304 55605c79c3f216d6cae8e3df3e50a814 556 Pfam PF00750 tRNA synthetases class I (R) 104 400 2.8E-31 T 14-10-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 DB29_02304 55605c79c3f216d6cae8e3df3e50a814 556 SMART SM01016 9 95 7.1E-35 T 14-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 DB29_02304 55605c79c3f216d6cae8e3df3e50a814 556 SUPERFAMILY SSF52374 118 448 6.19E-100 T 14-10-2018 DB29_02304 55605c79c3f216d6cae8e3df3e50a814 556 SUPERFAMILY SSF47323 432 556 1.11E-37 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 DB29_02304 55605c79c3f216d6cae8e3df3e50a814 556 Gene3D G3DSA:3.40.50.620 124 431 2.8E-177 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DB29_02304 55605c79c3f216d6cae8e3df3e50a814 556 PRINTS PR01038 Arginyl-tRNA synthetase signature 124 139 1.3E-25 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 DB29_02304 55605c79c3f216d6cae8e3df3e50a814 556 PRINTS PR01038 Arginyl-tRNA synthetase signature 163 176 1.3E-25 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 DB29_02304 55605c79c3f216d6cae8e3df3e50a814 556 PRINTS PR01038 Arginyl-tRNA synthetase signature 306 327 1.3E-25 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 DB29_02304 55605c79c3f216d6cae8e3df3e50a814 556 PRINTS PR01038 Arginyl-tRNA synthetase signature 139 155 1.3E-25 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 DB29_02304 55605c79c3f216d6cae8e3df3e50a814 556 SUPERFAMILY SSF55190 10 115 5.1E-29 T 14-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 DB29_02304 55605c79c3f216d6cae8e3df3e50a814 556 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 13 95 5.2E-26 T 14-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 DB29_02304 55605c79c3f216d6cae8e3df3e50a814 556 Hamap MF_00123 Arginine--tRNA ligase [argS]. 9 556 28.967 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 DB29_02304 55605c79c3f216d6cae8e3df3e50a814 556 Gene3D G3DSA:3.30.1360.70 5 120 3.4E-28 T 14-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 DB29_02304 55605c79c3f216d6cae8e3df3e50a814 556 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 134 143 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 DB29_02304 55605c79c3f216d6cae8e3df3e50a814 556 Gene3D G3DSA:1.10.730.10 432 556 2.8E-177 T 14-10-2018 DB29_01207 27f923153f21b021c2430167412f6399 345 Gene3D G3DSA:3.40.50.720 7 315 2.5E-99 T 14-10-2018 DB29_01207 27f923153f21b021c2430167412f6399 345 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 4 124 5.8E-29 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 DB29_01207 27f923153f21b021c2430167412f6399 345 Gene3D G3DSA:3.30.360.10 129 335 2.5E-99 T 14-10-2018 DB29_01207 27f923153f21b021c2430167412f6399 345 PRINTS PR01775 Bacterial glucose-fructose oxidoreductase signature 308 324 1.5E-5 T 14-10-2018 IPR008354 Glucose-fructose oxidoreductase, bacterial MetaCyc: PWY-5530 DB29_01207 27f923153f21b021c2430167412f6399 345 PRINTS PR01775 Bacterial glucose-fructose oxidoreductase signature 114 128 1.5E-5 T 14-10-2018 IPR008354 Glucose-fructose oxidoreductase, bacterial MetaCyc: PWY-5530 DB29_01207 27f923153f21b021c2430167412f6399 345 PRINTS PR01775 Bacterial glucose-fructose oxidoreductase signature 2 15 1.5E-5 T 14-10-2018 IPR008354 Glucose-fructose oxidoreductase, bacterial MetaCyc: PWY-5530 DB29_01207 27f923153f21b021c2430167412f6399 345 PRINTS PR01775 Bacterial glucose-fructose oxidoreductase signature 52 68 1.5E-5 T 14-10-2018 IPR008354 Glucose-fructose oxidoreductase, bacterial MetaCyc: PWY-5530 DB29_01207 27f923153f21b021c2430167412f6399 345 SUPERFAMILY SSF55347 130 312 9.94E-39 T 14-10-2018 DB29_01207 27f923153f21b021c2430167412f6399 345 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 136 246 8.0E-10 T 14-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 DB29_01207 27f923153f21b021c2430167412f6399 345 SUPERFAMILY SSF51735 3 155 5.24E-56 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_03957 a64e5e0981cd24f8b1626f8e0d572a57 450 Pfam PF01189 16S rRNA methyltransferase RsmB/F 249 446 2.7E-58 T 14-10-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 DB29_03957 a64e5e0981cd24f8b1626f8e0d572a57 450 Gene3D G3DSA:3.40.50.150 147 448 2.8E-85 T 14-10-2018 DB29_03957 a64e5e0981cd24f8b1626f8e0d572a57 450 SUPERFAMILY SSF48013 5 134 2.75E-35 T 14-10-2018 IPR035926 NusB-like superfamily DB29_03957 a64e5e0981cd24f8b1626f8e0d572a57 450 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 10 449 6.7E-135 T 14-10-2018 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 DB29_03957 a64e5e0981cd24f8b1626f8e0d572a57 450 SUPERFAMILY SSF53335 142 448 1.49E-75 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DB29_03957 a64e5e0981cd24f8b1626f8e0d572a57 450 Pfam PF01029 NusB family 9 131 7.0E-29 T 14-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 DB29_03957 a64e5e0981cd24f8b1626f8e0d572a57 450 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 325 337 2.4E-30 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase DB29_03957 a64e5e0981cd24f8b1626f8e0d572a57 450 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 260 270 2.4E-30 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase DB29_03957 a64e5e0981cd24f8b1626f8e0d572a57 450 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 375 391 2.4E-30 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase DB29_03957 a64e5e0981cd24f8b1626f8e0d572a57 450 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 431 448 2.4E-30 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase DB29_03957 a64e5e0981cd24f8b1626f8e0d572a57 450 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 231 245 2.4E-30 T 14-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase DB29_03957 a64e5e0981cd24f8b1626f8e0d572a57 450 Gene3D G3DSA:1.10.940.10 4 140 3.1E-38 T 14-10-2018 IPR035926 NusB-like superfamily DB29_01671 f5fd2d648571d2481ed142d1be85119c 383 Gene3D G3DSA:3.40.50.720 3 137 4.8E-22 T 14-10-2018 DB29_01671 f5fd2d648571d2481ed142d1be85119c 383 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 6 104 6.3E-14 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 DB29_01671 f5fd2d648571d2481ed142d1be85119c 383 SUPERFAMILY SSF55347 141 314 9.81E-6 T 14-10-2018 DB29_01671 f5fd2d648571d2481ed142d1be85119c 383 SUPERFAMILY SSF51735 6 164 3.43E-28 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_01671 f5fd2d648571d2481ed142d1be85119c 383 Gene3D G3DSA:3.30.360.10 138 288 1.0E-14 T 14-10-2018 DB29_02233 af633fdb6a2a69f248020cefb77c9f7f 310 Gene3D G3DSA:1.10.3470.10 12 276 7.6E-6 T 14-10-2018 IPR037294 ABC transporter, BtuC-like DB29_02233 af633fdb6a2a69f248020cefb77c9f7f 310 Pfam PF00950 ABC 3 transport family 9 271 2.2E-66 T 14-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 DB29_02233 af633fdb6a2a69f248020cefb77c9f7f 310 SUPERFAMILY SSF81345 11 269 7.45E-28 T 14-10-2018 IPR037294 ABC transporter, BtuC-like DB29_01828 6fe821a7964b7c1438493903c1dab250 53 Pfam PF09680 Protein of unknown function (Tiny_TM_bacill) 29 52 3.2E-12 T 14-10-2018 IPR010070 Sporulation protein YjcZ-like DB29_01828 6fe821a7964b7c1438493903c1dab250 53 TIGRFAM TIGR01732 tiny_TM_bacill: conserved hypothetical protein 26 52 2.1E-14 T 14-10-2018 IPR010070 Sporulation protein YjcZ-like DB29_04084 73715704a407dad6d77d788e0c4cd8b0 525 Pfam PF01966 HD domain 342 433 1.6E-18 T 14-10-2018 IPR006674 HD domain DB29_04084 73715704a407dad6d77d788e0c4cd8b0 525 SUPERFAMILY SSF54791 213 309 3.26E-17 T 14-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 DB29_04084 73715704a407dad6d77d788e0c4cd8b0 525 TIGRFAM TIGR03319 RNase_Y: ribonuclease Y 13 525 4.6E-248 T 14-10-2018 IPR017705 Ribonuclease Y GO:0003723|GO:0006402|GO:0016020 DB29_04084 73715704a407dad6d77d788e0c4cd8b0 525 Pfam PF00013 KH domain 218 276 8.9E-7 T 14-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 DB29_04084 73715704a407dad6d77d788e0c4cd8b0 525 TIGRFAM TIGR00277 HDIG: HDIG domain 337 414 2.2E-26 T 14-10-2018 IPR006675 HDIG domain DB29_04084 73715704a407dad6d77d788e0c4cd8b0 525 SMART SM00322 213 280 2.6E-8 T 14-10-2018 IPR004087 K Homology domain GO:0003676 DB29_04084 73715704a407dad6d77d788e0c4cd8b0 525 SMART SM00471 337 443 9.1E-13 T 14-10-2018 IPR003607 HD/PDEase domain DB29_04084 73715704a407dad6d77d788e0c4cd8b0 525 SUPERFAMILY SSF109604 321 472 6.96E-31 T 14-10-2018 DB29_04084 73715704a407dad6d77d788e0c4cd8b0 525 Gene3D G3DSA:1.10.3210.10 324 478 2.5E-19 T 14-10-2018 DB29_04084 73715704a407dad6d77d788e0c4cd8b0 525 Gene3D G3DSA:3.30.1370.10 213 310 1.1E-9 T 14-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 DB29_04084 73715704a407dad6d77d788e0c4cd8b0 525 Pfam PF12072 Domain of unknown function (DUF3552) 12 210 8.3E-73 T 14-10-2018 IPR022711 Ribonuclease Y, N-terminal DB29_04084 73715704a407dad6d77d788e0c4cd8b0 525 Hamap MF_00335 Ribonuclease Y [rny]. 10 525 25.785 T 14-10-2018 IPR017705 Ribonuclease Y GO:0003723|GO:0006402|GO:0016020 DB29_03747 4cce37e95ac97a47d0bbadd519c6893a 249 Pfam PF13649 Methyltransferase domain 42 136 5.9E-17 T 14-10-2018 DB29_03747 4cce37e95ac97a47d0bbadd519c6893a 249 SUPERFAMILY SSF53335 1 213 2.21E-32 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DB29_03747 4cce37e95ac97a47d0bbadd519c6893a 249 Gene3D G3DSA:3.40.50.150 28 248 2.0E-33 T 14-10-2018 DB29_03616 ea9fd6ddae149487f83cae7dd1ab8474 434 Gene3D G3DSA:3.10.50.40 151 248 7.0E-101 T 14-10-2018 DB29_03616 ea9fd6ddae149487f83cae7dd1ab8474 434 Hamap MF_00303 Trigger factor [tig]. 1 430 24.703 T 14-10-2018 IPR005215 Trigger factor GO:0015031 DB29_03616 ea9fd6ddae149487f83cae7dd1ab8474 434 Gene3D G3DSA:1.10.3120.10 117 428 7.0E-101 T 14-10-2018 IPR037041 Trigger factor, C-terminal domain superfamily GO:0006457|GO:0015031 DB29_03616 ea9fd6ddae149487f83cae7dd1ab8474 434 SUPERFAMILY SSF109998 250 431 6.38E-46 T 14-10-2018 IPR027304 Trigger factor/SurA domain superfamily DB29_03616 ea9fd6ddae149487f83cae7dd1ab8474 434 SUPERFAMILY SSF102735 1 131 5.89E-40 T 14-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 DB29_03616 ea9fd6ddae149487f83cae7dd1ab8474 434 Pfam PF05697 Bacterial trigger factor protein (TF) 1 145 7.8E-44 T 14-10-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 DB29_03616 ea9fd6ddae149487f83cae7dd1ab8474 434 TIGRFAM TIGR00115 tig: trigger factor 14 423 3.0E-149 T 14-10-2018 IPR005215 Trigger factor GO:0015031 DB29_03616 ea9fd6ddae149487f83cae7dd1ab8474 434 SUPERFAMILY SSF54534 89 243 8.05E-38 T 14-10-2018 DB29_03616 ea9fd6ddae149487f83cae7dd1ab8474 434 Gene3D G3DSA:3.30.70.1050 1 116 2.1E-30 T 14-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 DB29_03616 ea9fd6ddae149487f83cae7dd1ab8474 434 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 264 425 1.4E-49 T 14-10-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 DB29_03616 ea9fd6ddae149487f83cae7dd1ab8474 434 PIRSF PIRSF003095 1 434 2.7E-140 T 14-10-2018 IPR005215 Trigger factor GO:0015031 DB29_03616 ea9fd6ddae149487f83cae7dd1ab8474 434 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 160 239 1.3E-14 T 14-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain DB29_03930 9dcd1f5a0efef296bcceb75260675a46 177 TIGRFAM TIGR03544 DivI1A_domain: DivIVA domain 8 41 1.8E-18 T 14-10-2018 IPR019933 DivIVA domain DB29_03930 9dcd1f5a0efef296bcceb75260675a46 177 Pfam PF05103 DivIVA protein 8 138 2.4E-50 T 14-10-2018 IPR007793 DivIVA family DB29_01236 9076c100124dd4d14f6ad1f7e367dc76 351 SUPERFAMILY SSF51004 11 348 2.09E-46 T 14-10-2018 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily DB29_01236 9076c100124dd4d14f6ad1f7e367dc76 351 Pfam PF10282 Lactonase, 7-bladed beta-propeller 6 346 8.0E-125 T 14-10-2018 IPR019405 Lactonase, 7-bladed beta propeller DB29_01236 9076c100124dd4d14f6ad1f7e367dc76 351 Gene3D G3DSA:2.130.10.10 4 349 5.7E-119 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 DB29_03012 7a22db94ff78d85ca5b1b4bb143cd867 195 SUPERFAMILY SSF46689 4 74 1.8E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DB29_03012 7a22db94ff78d85ca5b1b4bb143cd867 195 Gene3D G3DSA:1.10.357.10 7 194 9.2E-30 T 14-10-2018 DB29_03012 7a22db94ff78d85ca5b1b4bb143cd867 195 SUPERFAMILY SSF48498 81 189 8.9E-14 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily DB29_03012 7a22db94ff78d85ca5b1b4bb143cd867 195 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 58 1.0E-13 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DB29_03012 7a22db94ff78d85ca5b1b4bb143cd867 195 ProSitePatterns PS01081 TetR-type HTH domain signature. 24 55 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site DB29_03012 7a22db94ff78d85ca5b1b4bb143cd867 195 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 6.6E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DB29_03012 7a22db94ff78d85ca5b1b4bb143cd867 195 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 6.6E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DB29_02886 86bb6d5a7031eba0dc530a3c1c307628 307 SUPERFAMILY SSF161111 21 220 1.83E-59 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily DB29_02886 86bb6d5a7031eba0dc530a3c1c307628 307 Gene3D G3DSA:1.20.1510.10 22 219 9.5E-48 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily DB29_02886 86bb6d5a7031eba0dc530a3c1c307628 307 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 22 298 1.2E-92 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 DB29_02886 86bb6d5a7031eba0dc530a3c1c307628 307 SUPERFAMILY SSF160240 226 296 5.49E-10 T 14-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 DB29_02886 86bb6d5a7031eba0dc530a3c1c307628 307 Pfam PF01545 Cation efflux family 26 219 3.4E-50 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 DB29_00962 51ee336dd638546785ecd6342fa802d3 432 SUPERFAMILY SSF48557 3 427 3.46E-139 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 DB29_00962 51ee336dd638546785ecd6342fa802d3 432 Pfam PF00206 Lyase 6 282 1.5E-75 T 14-10-2018 IPR022761 Fumarate lyase, N-terminal DB29_00962 51ee336dd638546785ecd6342fa802d3 432 Gene3D G3DSA:1.10.40.30 349 432 6.3E-35 T 14-10-2018 DB29_00962 51ee336dd638546785ecd6342fa802d3 432 PRINTS PR00149 Fumarate lyase superfamily signature 216 243 2.4E-27 T 14-10-2018 IPR000362 Fumarate lyase family DB29_00962 51ee336dd638546785ecd6342fa802d3 432 PRINTS PR00149 Fumarate lyase superfamily signature 261 277 2.4E-27 T 14-10-2018 IPR000362 Fumarate lyase family DB29_00962 51ee336dd638546785ecd6342fa802d3 432 PRINTS PR00149 Fumarate lyase superfamily signature 133 151 2.4E-27 T 14-10-2018 IPR000362 Fumarate lyase family DB29_00962 51ee336dd638546785ecd6342fa802d3 432 PRINTS PR00149 Fumarate lyase superfamily signature 88 106 2.4E-27 T 14-10-2018 IPR000362 Fumarate lyase family DB29_00962 51ee336dd638546785ecd6342fa802d3 432 Pfam PF10397 Adenylosuccinate lyase C-terminus 350 427 4.9E-24 T 14-10-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 DB29_00962 51ee336dd638546785ecd6342fa802d3 432 Gene3D G3DSA:1.10.275.10 1 92 4.3E-40 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal DB29_00962 51ee336dd638546785ecd6342fa802d3 432 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 1 428 2.9E-176 T 14-10-2018 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 DB29_00962 51ee336dd638546785ecd6342fa802d3 432 PRINTS PR00145 Argininosuccinate lyase family signature 261 277 5.0E-11 T 14-10-2018 DB29_00962 51ee336dd638546785ecd6342fa802d3 432 PRINTS PR00145 Argininosuccinate lyase family signature 87 109 5.0E-11 T 14-10-2018 DB29_00962 51ee336dd638546785ecd6342fa802d3 432 PRINTS PR00145 Argininosuccinate lyase family signature 216 240 5.0E-11 T 14-10-2018 DB29_00962 51ee336dd638546785ecd6342fa802d3 432 PRINTS PR00145 Argininosuccinate lyase family signature 128 148 5.0E-11 T 14-10-2018 DB29_00962 51ee336dd638546785ecd6342fa802d3 432 SMART SM00998 349 429 2.7E-38 T 14-10-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 DB29_00962 51ee336dd638546785ecd6342fa802d3 432 ProSitePatterns PS00163 Fumarate lyases signature. 261 270 - T 14-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 DB29_00962 51ee336dd638546785ecd6342fa802d3 432 Gene3D G3DSA:1.20.200.10 93 348 9.8E-100 T 14-10-2018 DB29_01778 214e8eec20cbb86f82c029be44aa78d0 405 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 4 403 1.1E-142 T 14-10-2018 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: R-HSA-83936 DB29_01778 214e8eec20cbb86f82c029be44aa78d0 405 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 195 403 2.3E-74 T 14-10-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 DB29_01778 214e8eec20cbb86f82c029be44aa78d0 405 Pfam PF07670 Nucleoside recognition 93 187 1.4E-8 T 14-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 DB29_01778 214e8eec20cbb86f82c029be44aa78d0 405 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 8 80 8.4E-22 T 14-10-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 DB29_00267 7b79bc8e75ea685ab5e96c24586a529c 65 Gene3D G3DSA:3.10.20.30 1 65 7.3E-19 T 14-10-2018 IPR012675 Beta-grasp domain superfamily DB29_00267 7b79bc8e75ea685ab5e96c24586a529c 65 SUPERFAMILY SSF54285 3 64 1.68E-15 T 14-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp DB29_00267 7b79bc8e75ea685ab5e96c24586a529c 65 Pfam PF02597 ThiS family 8 65 2.4E-12 T 14-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 DB29_00267 7b79bc8e75ea685ab5e96c24586a529c 65 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 4 65 2.9E-19 T 14-10-2018 IPR010035 ThiS, thiamine-biosynthesis DB29_02486 f84a2dadf2aad626c12da0c2c7f081f4 274 PIRSF PIRSF000477 2 272 3.7E-108 T 14-10-2018 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-6798695|Reactome: R-HSA-74217|Reactome: R-HSA-74259 DB29_02486 f84a2dadf2aad626c12da0c2c7f081f4 274 SUPERFAMILY SSF53167 2 272 1.17E-92 T 14-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 DB29_02486 f84a2dadf2aad626c12da0c2c7f081f4 274 TIGRFAM TIGR01697 PNPH-PUNA-XAPA: inosine/guanosine/xanthosine phosphorylase family 24 268 2.8E-102 T 14-10-2018 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-6798695|Reactome: R-HSA-74217|Reactome: R-HSA-74259 DB29_02486 f84a2dadf2aad626c12da0c2c7f081f4 274 Pfam PF01048 Phosphorylase superfamily 24 269 1.2E-51 T 14-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 DB29_02486 f84a2dadf2aad626c12da0c2c7f081f4 274 Gene3D G3DSA:3.40.50.1580 1 272 3.8E-110 T 14-10-2018 DB29_02486 f84a2dadf2aad626c12da0c2c7f081f4 274 TIGRFAM TIGR01700 PNPH: purine nucleoside phosphorylase I, inosine and guanosine-specific 24 268 9.8E-102 T 14-10-2018 IPR011270 Purine nucleoside phosphorylase I, inosine/guanosine-specific GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-6798695|Reactome: R-HSA-74217|Reactome: R-HSA-74259 DB29_02733 1d4f9131a5697f1ad4398fbd73a791ab 329 Gene3D G3DSA:3.75.10.10 31 329 5.5E-71 T 14-10-2018 DB29_02733 1d4f9131a5697f1ad4398fbd73a791ab 329 Pfam PF02274 Amidinotransferase 114 327 4.5E-25 T 14-10-2018 DB29_02733 1d4f9131a5697f1ad4398fbd73a791ab 329 SUPERFAMILY SSF55909 31 327 4.32E-61 T 14-10-2018 DB29_01380 119845f398bc52deeaebe9b5545cb84d 130 Pfam PF17369 Family of unknown function (DUF5391) 3 126 2.2E-28 T 14-10-2018 IPR020204 Uncharacterised protein family, YxaJ DB29_01380 119845f398bc52deeaebe9b5545cb84d 130 ProDom PD086672 YXAJ MEMBRANE TRANSMEMBRANE 2 124 2.0E-45 T 14-10-2018 IPR020204 Uncharacterised protein family, YxaJ DB29_02765 6de869e8a524c9adbb88862768056240 273 SUPERFAMILY SSF161098 2 273 8.11E-61 T 14-10-2018 IPR035906 MetI-like superfamily DB29_02765 6de869e8a524c9adbb88862768056240 273 Gene3D G3DSA:1.10.3720.10 1 261 4.4E-52 T 14-10-2018 IPR035906 MetI-like superfamily DB29_02765 6de869e8a524c9adbb88862768056240 273 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 90 267 1.1E-26 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DB29_04088 963443082cb4fe777dcf44899d928574 526 Gene3D G3DSA:3.40.50.12160 84 217 3.4E-33 T 14-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily DB29_04088 963443082cb4fe777dcf44899d928574 526 SMART SM00729 228 445 1.1E-65 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 DB29_04088 963443082cb4fe777dcf44899d928574 526 Gene3D G3DSA:3.80.30.20 225 459 9.0E-91 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe DB29_04088 963443082cb4fe777dcf44899d928574 526 SUPERFAMILY SSF102114 216 450 3.66E-64 T 14-10-2018 DB29_04088 963443082cb4fe777dcf44899d928574 526 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 83 519 72.494 T 14-10-2018 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 DB29_04088 963443082cb4fe777dcf44899d928574 526 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 232 252 - T 14-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 DB29_04088 963443082cb4fe777dcf44899d928574 526 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 84 515 1.7E-158 T 14-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 DB29_04088 963443082cb4fe777dcf44899d928574 526 Pfam PF01938 TRAM domain 461 518 6.0E-14 T 14-10-2018 IPR002792 TRAM domain DB29_04088 963443082cb4fe777dcf44899d928574 526 Pfam PF04055 Radical SAM superfamily 232 403 1.2E-32 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 DB29_04088 963443082cb4fe777dcf44899d928574 526 Pfam PF00919 Uncharacterized protein family UPF0004 84 185 1.6E-28 T 14-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 DB29_04088 963443082cb4fe777dcf44899d928574 526 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 84 518 3.0E-187 T 14-10-2018 DB29_04330 81c053c1f876b215b36481a53f9e6647 1525 Pfam PF04898 Glutamate synthase central domain 470 753 8.3E-111 T 14-10-2018 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 DB29_04330 81c053c1f876b215b36481a53f9e6647 1525 SUPERFAMILY SSF69336 1231 1496 6.15E-90 T 14-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 DB29_04330 81c053c1f876b215b36481a53f9e6647 1525 Gene3D G3DSA:3.20.20.70 798 1234 1.1E-192 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DB29_04330 81c053c1f876b215b36481a53f9e6647 1525 SUPERFAMILY SSF56235 25 445 9.26E-158 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DB29_04330 81c053c1f876b215b36481a53f9e6647 1525 Gene3D G3DSA:3.20.20.70 451 797 2.7E-132 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DB29_04330 81c053c1f876b215b36481a53f9e6647 1525 SUPERFAMILY SSF51395 464 1218 1.05E-259 T 14-10-2018 DB29_04330 81c053c1f876b215b36481a53f9e6647 1525 Pfam PF01493 GXGXG motif 1263 1449 1.1E-80 T 14-10-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0016491|GO:0055114 DB29_04330 81c053c1f876b215b36481a53f9e6647 1525 Gene3D G3DSA:2.160.20.60 1235 1506 9.1E-110 T 14-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 DB29_04330 81c053c1f876b215b36481a53f9e6647 1525 Gene3D G3DSA:3.60.20.10 25 450 8.4E-186 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DB29_04330 81c053c1f876b215b36481a53f9e6647 1525 Pfam PF01645 Conserved region in glutamate synthase 813 1182 2.2E-155 T 14-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 DB29_04330 81c053c1f876b215b36481a53f9e6647 1525 Pfam PF00310 Glutamine amidotransferases class-II 25 442 1.7E-187 T 14-10-2018 IPR017932 Glutamine amidotransferase type 2 domain DB29_02298 e25b79d528bf372b7ab5f03b6d45a75d 274 SUPERFAMILY SSF55729 39 271 3.84E-33 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase DB29_02298 e25b79d528bf372b7ab5f03b6d45a75d 274 Pfam PF00583 Acetyltransferase (GNAT) family 166 262 4.9E-13 T 14-10-2018 IPR000182 GNAT domain DB29_02298 e25b79d528bf372b7ab5f03b6d45a75d 274 Gene3D G3DSA:3.40.630.30 2 273 8.4E-36 T 14-10-2018 DB29_02010 cb18d0aa24f88afd87ec9d373b896606 498 SUPERFAMILY SSF53720 25 496 8.25E-187 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 DB29_02010 cb18d0aa24f88afd87ec9d373b896606 498 Gene3D G3DSA:3.40.309.10 274 463 1.9E-206 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 DB29_02010 cb18d0aa24f88afd87ec9d373b896606 498 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 269 276 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 DB29_02010 cb18d0aa24f88afd87ec9d373b896606 498 Pfam PF00171 Aldehyde dehydrogenase family 32 493 6.3E-192 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 DB29_02010 cb18d0aa24f88afd87ec9d373b896606 498 Gene3D G3DSA:3.40.605.10 28 491 1.9E-206 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 DB29_03334 9f11c7d864f851adbca2332cf2f6799c 327 Gene3D G3DSA:3.40.50.1980 180 327 4.1E-28 T 14-10-2018 DB29_03334 9f11c7d864f851adbca2332cf2f6799c 327 SUPERFAMILY SSF53807 42 313 9.81E-50 T 14-10-2018 DB29_03334 9f11c7d864f851adbca2332cf2f6799c 327 Gene3D G3DSA:3.40.50.1980 34 178 1.5E-23 T 14-10-2018 DB29_03334 9f11c7d864f851adbca2332cf2f6799c 327 Pfam PF01497 Periplasmic binding protein 111 303 1.5E-24 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain DB29_02235 5579d55c25dff4fd8b3d457fa11a025a 183 PIRSF PIRSF007165 1 180 9.0E-37 T 14-10-2018 IPR011188 Uncharacterised protein family UPF0302 DB29_02235 5579d55c25dff4fd8b3d457fa11a025a 183 Gene3D G3DSA:1.20.1440.290 1 121 1.5E-28 T 14-10-2018 IPR038091 UPF0302, N-terminal domain superfamily DB29_02235 5579d55c25dff4fd8b3d457fa11a025a 183 Pfam PF08864 UPF0302 domain 6 108 4.2E-29 T 14-10-2018 IPR014963 Uncharacterised domain UPF0302, N-terminal DB29_02235 5579d55c25dff4fd8b3d457fa11a025a 183 Pfam PF08858 IDEAL domain 136 172 2.0E-10 T 14-10-2018 IPR014957 IDEAL domain DB29_02235 5579d55c25dff4fd8b3d457fa11a025a 183 Gene3D G3DSA:4.10.810.10 128 182 5.5E-9 T 14-10-2018 IPR027393 Virus scaffolding protein, C-terminal GO:0005515 DB29_02235 5579d55c25dff4fd8b3d457fa11a025a 183 SMART SM00914 136 172 7.4E-11 T 14-10-2018 IPR014957 IDEAL domain DB29_03309 2404d1beed5b7b37ac17eaf2b212e589 392 PIRSF PIRSF000429 1 392 3.2E-129 T 14-10-2018 IPR002155 Thiolase GO:0016747 DB29_03309 2404d1beed5b7b37ac17eaf2b212e589 392 SUPERFAMILY SSF53901 270 391 7.78E-43 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 DB29_03309 2404d1beed5b7b37ac17eaf2b212e589 392 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 87 105 - T 14-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 DB29_03309 2404d1beed5b7b37ac17eaf2b212e589 392 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 390 1.2E-137 T 14-10-2018 IPR002155 Thiolase GO:0016747 DB29_03309 2404d1beed5b7b37ac17eaf2b212e589 392 ProSitePatterns PS00737 Thiolases signature 2. 338 354 - T 14-10-2018 IPR020613 Thiolase, conserved site GO:0016747 DB29_03309 2404d1beed5b7b37ac17eaf2b212e589 392 SUPERFAMILY SSF53901 1 265 2.64E-74 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 DB29_03309 2404d1beed5b7b37ac17eaf2b212e589 392 Gene3D G3DSA:3.40.47.10 133 386 2.6E-149 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 DB29_03309 2404d1beed5b7b37ac17eaf2b212e589 392 Gene3D G3DSA:3.40.47.10 4 275 2.6E-149 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 DB29_03309 2404d1beed5b7b37ac17eaf2b212e589 392 ProSitePatterns PS00099 Thiolases active site. 373 386 - T 14-10-2018 IPR020610 Thiolase, active site GO:0016747 DB29_03309 2404d1beed5b7b37ac17eaf2b212e589 392 Pfam PF00108 Thiolase, N-terminal domain 5 261 1.7E-75 T 14-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 DB29_03309 2404d1beed5b7b37ac17eaf2b212e589 392 Pfam PF02803 Thiolase, C-terminal domain 270 391 8.0E-48 T 14-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 DB29_01129 ce7e97cdc9e15eb7555266585a9188f4 211 Gene3D G3DSA:3.40.50.720 83 210 7.8E-47 T 14-10-2018 DB29_01129 ce7e97cdc9e15eb7555266585a9188f4 211 SUPERFAMILY SSF46785 9 80 1.47E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_01129 ce7e97cdc9e15eb7555266585a9188f4 211 Pfam PF02629 CoA binding domain 83 180 4.5E-29 T 14-10-2018 IPR003781 CoA-binding GO:0048037 DB29_01129 ce7e97cdc9e15eb7555266585a9188f4 211 SUPERFAMILY SSF51735 84 208 2.1E-27 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_01129 ce7e97cdc9e15eb7555266585a9188f4 211 SMART SM00881 81 181 2.0E-22 T 14-10-2018 IPR003781 CoA-binding GO:0048037 DB29_01129 ce7e97cdc9e15eb7555266585a9188f4 211 Hamap MF_01131 Redox-sensing transcriptional repressor Rex [rex]. 3 210 38.504 T 14-10-2018 IPR022876 Redox-sensing transcriptional repressor Rex GO:0005737|GO:0045892|GO:0051775 DB29_01129 ce7e97cdc9e15eb7555266585a9188f4 211 Gene3D G3DSA:1.10.10.10 1 82 3.6E-30 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_01129 ce7e97cdc9e15eb7555266585a9188f4 211 Pfam PF06971 Putative DNA-binding protein N-terminus 7 55 1.6E-19 T 14-10-2018 IPR009718 Rex DNA-binding, C-terminal domain GO:0005737|GO:0045892|GO:0051775 DB29_01133 71ac3566e776ca7fd9689426da2d5a99 239 Pfam PF00814 Glycoprotease family 33 227 1.9E-32 T 14-10-2018 IPR000905 Gcp-like domain DB29_01133 71ac3566e776ca7fd9689426da2d5a99 239 Gene3D G3DSA:3.30.420.40 96 191 2.9E-49 T 14-10-2018 DB29_01133 71ac3566e776ca7fd9689426da2d5a99 239 SUPERFAMILY SSF53067 3 108 2.46E-28 T 14-10-2018 DB29_01133 71ac3566e776ca7fd9689426da2d5a99 239 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 4 219 6.6E-52 T 14-10-2018 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB GO:0002949 DB29_01133 71ac3566e776ca7fd9689426da2d5a99 239 Gene3D G3DSA:3.30.420.40 4 220 2.9E-49 T 14-10-2018 DB29_01133 71ac3566e776ca7fd9689426da2d5a99 239 SUPERFAMILY SSF53067 109 217 2.85E-11 T 14-10-2018 DB29_03540 0a00c3148e33b512d25adb6761198b10 590 Gene3D G3DSA:1.20.1480.50 153 245 1.5E-7 T 14-10-2018 DB29_03540 0a00c3148e33b512d25adb6761198b10 590 PRINTS PR00344 Bacterial sensor protein C-terminal signature 546 564 6.3E-18 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB29_03540 0a00c3148e33b512d25adb6761198b10 590 PRINTS PR00344 Bacterial sensor protein C-terminal signature 570 583 6.3E-18 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB29_03540 0a00c3148e33b512d25adb6761198b10 590 PRINTS PR00344 Bacterial sensor protein C-terminal signature 511 525 6.3E-18 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB29_03540 0a00c3148e33b512d25adb6761198b10 590 PRINTS PR00344 Bacterial sensor protein C-terminal signature 529 539 6.3E-18 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB29_03540 0a00c3148e33b512d25adb6761198b10 590 Gene3D G3DSA:3.30.450.20 249 354 1.6E-10 T 14-10-2018 DB29_03540 0a00c3148e33b512d25adb6761198b10 590 SUPERFAMILY SSF158472 188 236 3.01E-7 T 14-10-2018 DB29_03540 0a00c3148e33b512d25adb6761198b10 590 Gene3D G3DSA:1.10.287.130 355 434 4.7E-26 T 14-10-2018 DB29_03540 0a00c3148e33b512d25adb6761198b10 590 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 243 361 7.6E-6 T 14-10-2018 IPR000014 PAS domain DB29_03540 0a00c3148e33b512d25adb6761198b10 590 SMART SM00304 187 239 1.1E-4 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DB29_03540 0a00c3148e33b512d25adb6761198b10 590 Pfam PF08448 PAS fold 253 357 1.4E-9 T 14-10-2018 IPR013656 PAS fold-4 DB29_03540 0a00c3148e33b512d25adb6761198b10 590 SMART SM00388 362 429 3.6E-18 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DB29_03540 0a00c3148e33b512d25adb6761198b10 590 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 474 585 1.9E-29 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DB29_03540 0a00c3148e33b512d25adb6761198b10 590 Pfam PF16736 Single Cache-like 35 150 1.3E-15 T 14-10-2018 IPR031967 PhoR, single Cache-like domain DB29_03540 0a00c3148e33b512d25adb6761198b10 590 SUPERFAMILY SSF47384 348 429 1.63E-18 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DB29_03540 0a00c3148e33b512d25adb6761198b10 590 Gene3D G3DSA:3.30.565.10 435 588 1.2E-49 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB29_03540 0a00c3148e33b512d25adb6761198b10 590 SUPERFAMILY SSF55874 419 584 9.69E-50 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB29_03540 0a00c3148e33b512d25adb6761198b10 590 Pfam PF00512 His Kinase A (phospho-acceptor) domain 363 428 6.5E-17 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DB29_03540 0a00c3148e33b512d25adb6761198b10 590 SMART SM00387 474 586 1.1E-42 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DB29_03540 0a00c3148e33b512d25adb6761198b10 590 SUPERFAMILY SSF55785 235 354 5.58E-11 T 14-10-2018 IPR035965 PAS domain superfamily DB29_02071 295c6442f81232711e63bb38b2ebf1e5 383 Pfam PF00266 Aminotransferase class-V 3 371 4.0E-79 T 14-10-2018 IPR000192 Aminotransferase class V domain DB29_02071 295c6442f81232711e63bb38b2ebf1e5 383 PIRSF PIRSF005572 1 383 3.9E-52 T 14-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 DB29_02071 295c6442f81232711e63bb38b2ebf1e5 383 Gene3D G3DSA:3.90.1150.10 3 372 2.3E-106 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DB29_02071 295c6442f81232711e63bb38b2ebf1e5 383 TIGRFAM TIGR01977 am_tr_V_EF2568: cysteine desulfurase family protein 3 378 1.6E-122 T 14-10-2018 IPR010969 Cysteine desulfurase-related, unknown function DB29_02071 295c6442f81232711e63bb38b2ebf1e5 383 SUPERFAMILY SSF53383 2 381 1.28E-90 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DB29_02071 295c6442f81232711e63bb38b2ebf1e5 383 Gene3D G3DSA:3.40.640.10 16 267 2.3E-106 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DB29_00824 2ab7e499dea444ce5a45418f2dcecf53 231 Gene3D G3DSA:1.10.10.10 129 230 8.8E-36 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_00824 2ab7e499dea444ce5a45418f2dcecf53 231 SMART SM00862 151 227 2.2E-28 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DB29_00824 2ab7e499dea444ce5a45418f2dcecf53 231 SMART SM00448 2 112 1.8E-41 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DB29_00824 2ab7e499dea444ce5a45418f2dcecf53 231 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 227 3.4E-28 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DB29_00824 2ab7e499dea444ce5a45418f2dcecf53 231 Gene3D G3DSA:3.40.50.2300 1 128 1.8E-35 T 14-10-2018 DB29_00824 2ab7e499dea444ce5a45418f2dcecf53 231 Pfam PF00072 Response regulator receiver domain 4 113 8.2E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DB29_00824 2ab7e499dea444ce5a45418f2dcecf53 231 SUPERFAMILY SSF52172 3 185 1.77E-38 T 14-10-2018 IPR011006 CheY-like superfamily DB29_03227 1790db421f32d1eba30c249d3f42c1f6 841 Gene3D G3DSA:1.10.3060.10 572 778 0.0 T 14-10-2018 DB29_03227 1790db421f32d1eba30c249d3f42c1f6 841 SUPERFAMILY SSF52540 4 396 3.6E-78 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_03227 1790db421f32d1eba30c249d3f42c1f6 841 Pfam PF07517 SecA DEAD-like domain 6 383 2.0E-121 T 14-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 DB29_03227 1790db421f32d1eba30c249d3f42c1f6 841 SUPERFAMILY SSF81767 226 349 6.28E-47 T 14-10-2018 IPR036670 SecA, preprotein cross-linking domain superfamily GO:0016020|GO:0017038 DB29_03227 1790db421f32d1eba30c249d3f42c1f6 841 SMART SM00957 5 383 1.4E-264 T 14-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 DB29_03227 1790db421f32d1eba30c249d3f42c1f6 841 Gene3D G3DSA:3.40.50.300 15 397 0.0 T 14-10-2018 DB29_03227 1790db421f32d1eba30c249d3f42c1f6 841 Pfam PF01043 SecA preprotein cross-linking domain 231 339 2.1E-42 T 14-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 DB29_03227 1790db421f32d1eba30c249d3f42c1f6 841 SUPERFAMILY SSF81886 572 829 6.8E-80 T 14-10-2018 IPR036266 SecA, Wing/Scaffold superfamily DB29_03227 1790db421f32d1eba30c249d3f42c1f6 841 Pfam PF02810 SEC-C motif 821 838 1.1E-9 T 14-10-2018 IPR004027 SEC-C motif DB29_03227 1790db421f32d1eba30c249d3f42c1f6 841 Gene3D G3DSA:3.90.1440.10 228 349 0.0 T 14-10-2018 DB29_03227 1790db421f32d1eba30c249d3f42c1f6 841 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 27 497 1.4E-233 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 DB29_03227 1790db421f32d1eba30c249d3f42c1f6 841 PRINTS PR00906 SecA protein signature 116 126 5.1E-63 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 DB29_03227 1790db421f32d1eba30c249d3f42c1f6 841 PRINTS PR00906 SecA protein signature 169 189 5.1E-63 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 DB29_03227 1790db421f32d1eba30c249d3f42c1f6 841 PRINTS PR00906 SecA protein signature 357 374 5.1E-63 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 DB29_03227 1790db421f32d1eba30c249d3f42c1f6 841 PRINTS PR00906 SecA protein signature 394 407 5.1E-63 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 DB29_03227 1790db421f32d1eba30c249d3f42c1f6 841 PRINTS PR00906 SecA protein signature 62 86 5.1E-63 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 DB29_03227 1790db421f32d1eba30c249d3f42c1f6 841 PRINTS PR00906 SecA protein signature 100 114 5.1E-63 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 DB29_03227 1790db421f32d1eba30c249d3f42c1f6 841 PRINTS PR00906 SecA protein signature 320 342 5.1E-63 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 DB29_03227 1790db421f32d1eba30c249d3f42c1f6 841 SUPERFAMILY SSF52540 398 570 1.64E-54 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_03227 1790db421f32d1eba30c249d3f42c1f6 841 SMART SM00958 227 339 8.8E-66 T 14-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 DB29_03227 1790db421f32d1eba30c249d3f42c1f6 841 ProSitePatterns PS01312 SecA family signature. 481 496 - T 14-10-2018 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 DB29_03227 1790db421f32d1eba30c249d3f42c1f6 841 Gene3D G3DSA:3.40.50.300 398 571 0.0 T 14-10-2018 DB29_03227 1790db421f32d1eba30c249d3f42c1f6 841 Hamap MF_01382 Protein translocase subunit SecA [secA]. 4 782 19.506 T 14-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 DB29_03227 1790db421f32d1eba30c249d3f42c1f6 841 Gene3D G3DSA:1.10.1200.230 622 706 0.0 T 14-10-2018 DB29_03227 1790db421f32d1eba30c249d3f42c1f6 841 Pfam PF07516 SecA Wing and Scaffold domain 569 779 6.0E-65 T 14-10-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 DB29_03886 d1cc5f1ca035d5ce1ebe68835b7ab718 381 SUPERFAMILY SSF55797 259 377 2.09E-21 T 14-10-2018 IPR035940 CAP superfamily DB29_03886 d1cc5f1ca035d5ce1ebe68835b7ab718 381 Pfam PF14504 CAP-associated N-terminal 95 234 1.4E-37 T 14-10-2018 IPR029410 CAP-associated domain DB29_03886 d1cc5f1ca035d5ce1ebe68835b7ab718 381 Gene3D G3DSA:3.40.33.10 52 378 2.3E-87 T 14-10-2018 IPR035940 CAP superfamily DB29_03886 d1cc5f1ca035d5ce1ebe68835b7ab718 381 Pfam PF00188 Cysteine-rich secretory protein family 265 375 9.4E-16 T 14-10-2018 IPR014044 CAP domain DB29_02678 56d3aff4412db7400d3feb921681100d 399 SMART SM00922 132 252 9.4E-15 T 14-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal DB29_02678 56d3aff4412db7400d3feb921681100d 399 Gene3D G3DSA:3.20.20.120 109 363 9.4E-166 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily DB29_02678 56d3aff4412db7400d3feb921681100d 399 Pfam PF13378 Enolase C-terminal domain-like 144 371 4.3E-40 T 14-10-2018 IPR029065 Enolase C-terminal domain-like DB29_02678 56d3aff4412db7400d3feb921681100d 399 SUPERFAMILY SSF51604 102 379 2.62E-68 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily DB29_02678 56d3aff4412db7400d3feb921681100d 399 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 13 114 8.0E-25 T 14-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain DB29_02678 56d3aff4412db7400d3feb921681100d 399 Gene3D G3DSA:3.30.390.10 6 396 9.4E-166 T 14-10-2018 IPR029017 Enolase-like, N-terminal DB29_02678 56d3aff4412db7400d3feb921681100d 399 SUPERFAMILY SSF54826 6 116 7.92E-30 T 14-10-2018 DB29_00715 aebdd2ef476c65c6bb396096e45d08b2 627 SUPERFAMILY SSF52540 4 247 1.9E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_00715 aebdd2ef476c65c6bb396096e45d08b2 627 Gene3D G3DSA:1.10.287.380 549 623 4.3E-12 T 14-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 DB29_00715 aebdd2ef476c65c6bb396096e45d08b2 627 Pfam PF16326 ABC transporter C-terminal domain 553 619 6.0E-18 T 14-10-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 DB29_00715 aebdd2ef476c65c6bb396096e45d08b2 627 Pfam PF00005 ABC transporter 20 187 1.1E-23 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB29_00715 aebdd2ef476c65c6bb396096e45d08b2 627 Gene3D G3DSA:3.40.50.300 282 548 1.2E-62 T 14-10-2018 DB29_00715 aebdd2ef476c65c6bb396096e45d08b2 627 SUPERFAMILY SSF52540 311 523 6.62E-50 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_00715 aebdd2ef476c65c6bb396096e45d08b2 627 Pfam PF00005 ABC transporter 335 469 7.9E-22 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB29_00715 aebdd2ef476c65c6bb396096e45d08b2 627 Pfam PF12848 ABC transporter 226 300 1.5E-11 T 14-10-2018 IPR032781 ABC-transporter extension domain DB29_00715 aebdd2ef476c65c6bb396096e45d08b2 627 ProSitePatterns PS00211 ABC transporters family signature. 159 173 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB29_00715 aebdd2ef476c65c6bb396096e45d08b2 627 SMART SM00382 28 249 2.9E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_00715 aebdd2ef476c65c6bb396096e45d08b2 627 SMART SM00382 343 520 2.4E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_00715 aebdd2ef476c65c6bb396096e45d08b2 627 Gene3D G3DSA:3.40.50.300 4 281 1.2E-61 T 14-10-2018 DB29_04366 43a9009ee315f0c13673a6399bc686fd 500 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 243 262 1.3E-73 T 14-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 DB29_04366 43a9009ee315f0c13673a6399bc686fd 500 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 290 306 1.3E-73 T 14-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 DB29_04366 43a9009ee315f0c13673a6399bc686fd 500 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 377 394 1.3E-73 T 14-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 DB29_04366 43a9009ee315f0c13673a6399bc686fd 500 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 226 242 1.3E-73 T 14-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 DB29_04366 43a9009ee315f0c13673a6399bc686fd 500 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 331 350 1.3E-73 T 14-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 DB29_04366 43a9009ee315f0c13673a6399bc686fd 500 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 263 282 1.3E-73 T 14-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 DB29_04366 43a9009ee315f0c13673a6399bc686fd 500 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 400 421 1.3E-73 T 14-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 DB29_04366 43a9009ee315f0c13673a6399bc686fd 500 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 445 463 1.3E-73 T 14-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 DB29_04366 43a9009ee315f0c13673a6399bc686fd 500 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 146 166 1.3E-73 T 14-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 DB29_04366 43a9009ee315f0c13673a6399bc686fd 500 Pfam PF02074 Carboxypeptidase Taq (M32) metallopeptidase 6 493 2.6E-190 T 14-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 DB29_04366 43a9009ee315f0c13673a6399bc686fd 500 Gene3D G3DSA:1.10.1370.30 2 499 2.4E-205 T 14-10-2018 DB29_04366 43a9009ee315f0c13673a6399bc686fd 500 SUPERFAMILY SSF55486 2 493 2.2E-114 T 14-10-2018 DB29_04366 43a9009ee315f0c13673a6399bc686fd 500 PIRSF PIRSF006615 1 499 3.4E-193 T 14-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 DB29_03698 bfad81b6084dc50778b239305a5f73d2 408 ProDom PD004193 ACETYLTRANSFERASE ORNITHINE ARGININE BIOSYNTHESIS ARGJ GLUTAMATE N-ACETYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIFUNCTIONAL 82 408 0.0 T 14-10-2018 DB29_03698 bfad81b6084dc50778b239305a5f73d2 408 Hamap MF_01106 Arginine biosynthesis bifunctional protein ArgJ [argJ]. 1 408 142.115 T 14-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 DB29_03698 bfad81b6084dc50778b239305a5f73d2 408 Pfam PF01960 ArgJ family 26 408 7.2E-146 T 14-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 DB29_03698 bfad81b6084dc50778b239305a5f73d2 408 SUPERFAMILY SSF56266 21 404 1.7E-132 T 14-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 DB29_03698 bfad81b6084dc50778b239305a5f73d2 408 Gene3D G3DSA:3.30.2330.10 195 279 5.8E-32 T 14-10-2018 DB29_03698 bfad81b6084dc50778b239305a5f73d2 408 Gene3D G3DSA:3.60.70.12 7 194 4.2E-67 T 14-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 DB29_03698 bfad81b6084dc50778b239305a5f73d2 408 Gene3D G3DSA:3.10.20.340 280 408 5.7E-47 T 14-10-2018 DB29_03698 bfad81b6084dc50778b239305a5f73d2 408 TIGRFAM TIGR00120 ArgJ: glutamate N-acetyltransferase/amino-acid acetyltransferase 14 408 2.0E-150 T 14-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 DB29_03816 0da6692c2878c8dce4844427afe5872b 365 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 219 351 7.8E-12 T 14-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 DB29_03816 0da6692c2878c8dce4844427afe5872b 365 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 149 200 1.0E-5 T 14-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 DB29_03816 0da6692c2878c8dce4844427afe5872b 365 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 74 87 - T 14-10-2018 IPR033524 Leu/Phe/Val dehydrogenases active site Reactome: R-HSA-2151201|Reactome: R-HSA-70614 DB29_03816 0da6692c2878c8dce4844427afe5872b 365 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 176 196 7.7E-22 T 14-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 DB29_03816 0da6692c2878c8dce4844427afe5872b 365 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 286 297 7.7E-22 T 14-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 DB29_03816 0da6692c2878c8dce4844427afe5872b 365 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 132 154 7.7E-22 T 14-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 DB29_03816 0da6692c2878c8dce4844427afe5872b 365 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 66 80 7.7E-22 T 14-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 DB29_03816 0da6692c2878c8dce4844427afe5872b 365 SUPERFAMILY SSF53223 5 143 1.22E-50 T 14-10-2018 DB29_03816 0da6692c2878c8dce4844427afe5872b 365 Gene3D G3DSA:3.40.50.720 134 336 5.7E-152 T 14-10-2018 DB29_03816 0da6692c2878c8dce4844427afe5872b 365 SUPERFAMILY SSF51735 141 353 1.66E-58 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_03816 0da6692c2878c8dce4844427afe5872b 365 PIRSF PIRSF000188 1 353 4.8E-165 T 14-10-2018 IPR016211 Glutamate/phenylalanine/leucine/valine dehydrogenase, bacterial/archaeal GO:0016639|GO:0055114 DB29_03816 0da6692c2878c8dce4844427afe5872b 365 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 21 131 2.5E-29 T 14-10-2018 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 DB29_03816 0da6692c2878c8dce4844427afe5872b 365 Gene3D G3DSA:3.40.50.10860 10 343 5.7E-152 T 14-10-2018 DB29_03816 0da6692c2878c8dce4844427afe5872b 365 SMART SM00839 144 351 1.6E-73 T 14-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 DB29_02661 9a9491940c4e3680033146653074fe24 74 Gene3D G3DSA:1.10.260.40 6 68 9.6E-11 T 14-10-2018 DB29_02661 9a9491940c4e3680033146653074fe24 74 SMART SM00530 6 62 5.4E-7 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DB29_02661 9a9491940c4e3680033146653074fe24 74 SUPERFAMILY SSF47413 1 69 3.1E-19 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DB29_02661 9a9491940c4e3680033146653074fe24 74 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 7 67 7.6E-24 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DB29_03999 4d6db3c9b1861e2447818437e573ae88 690 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 617 655 3.2E-13 T 14-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 DB29_03999 4d6db3c9b1861e2447818437e573ae88 690 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 659 687 2.3E-7 T 14-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 DB29_03999 4d6db3c9b1861e2447818437e573ae88 690 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 576 612 2.6E-16 T 14-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 DB29_03999 4d6db3c9b1861e2447818437e573ae88 690 SMART SM00437 242 510 6.7E-117 T 14-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 DB29_03999 4d6db3c9b1861e2447818437e573ae88 690 Gene3D G3DSA:2.70.20.10 184 457 8.6E-167 T 14-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 DB29_03999 4d6db3c9b1861e2447818437e573ae88 690 Gene3D G3DSA:3.30.65.10 559 618 9.0E-16 T 14-10-2018 DB29_03999 4d6db3c9b1861e2447818437e573ae88 690 Pfam PF01751 Toprim domain 5 113 9.0E-29 T 14-10-2018 IPR006171 TOPRIM domain DB29_03999 4d6db3c9b1861e2447818437e573ae88 690 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 279 302 - T 14-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 DB29_03999 4d6db3c9b1861e2447818437e573ae88 690 SMART SM00493 3 103 4.4E-29 T 14-10-2018 IPR006171 TOPRIM domain DB29_03999 4d6db3c9b1861e2447818437e573ae88 690 Pfam PF01131 DNA topoisomerase 128 547 5.7E-136 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 DB29_03999 4d6db3c9b1861e2447818437e573ae88 690 Gene3D G3DSA:1.10.460.10 135 550 8.6E-167 T 14-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 DB29_03999 4d6db3c9b1861e2447818437e573ae88 690 Gene3D G3DSA:1.10.290.10 250 385 8.6E-167 T 14-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 DB29_03999 4d6db3c9b1861e2447818437e573ae88 690 Hamap MF_00952 DNA topoisomerase 1 [topA]. 3 642 55.534 T 14-10-2018 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 DB29_03999 4d6db3c9b1861e2447818437e573ae88 690 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 370 386 4.9E-35 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 DB29_03999 4d6db3c9b1861e2447818437e573ae88 690 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 162 180 4.9E-35 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 DB29_03999 4d6db3c9b1861e2447818437e573ae88 690 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 293 302 4.9E-35 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 DB29_03999 4d6db3c9b1861e2447818437e573ae88 690 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 77 90 4.9E-35 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 DB29_03999 4d6db3c9b1861e2447818437e573ae88 690 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 473 487 4.9E-35 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 DB29_03999 4d6db3c9b1861e2447818437e573ae88 690 SUPERFAMILY SSF57783 576 613 4.08E-14 T 14-10-2018 DB29_03999 4d6db3c9b1861e2447818437e573ae88 690 SMART SM00436 104 192 7.5E-54 T 14-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 DB29_03999 4d6db3c9b1861e2447818437e573ae88 690 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 5 611 5.7E-262 T 14-10-2018 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 DB29_03999 4d6db3c9b1861e2447818437e573ae88 690 SUPERFAMILY SSF56712 4 589 4.05E-200 T 14-10-2018 IPR023405 DNA topoisomerase, type IA, core domain DB29_03999 4d6db3c9b1861e2447818437e573ae88 690 Gene3D G3DSA:3.40.50.140 1 134 1.7E-53 T 14-10-2018 DB29_02572 95ce989faf1930dcdaa05341bd2eca56 252 Gene3D G3DSA:1.10.10.60 148 199 2.8E-11 T 14-10-2018 DB29_02572 95ce989faf1930dcdaa05341bd2eca56 252 SMART SM00342 167 250 3.9E-20 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DB29_02572 95ce989faf1930dcdaa05341bd2eca56 252 Gene3D G3DSA:3.40.50.2300 1 133 2.4E-30 T 14-10-2018 DB29_02572 95ce989faf1930dcdaa05341bd2eca56 252 Pfam PF00072 Response regulator receiver domain 4 115 1.1E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DB29_02572 95ce989faf1930dcdaa05341bd2eca56 252 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 219 234 3.9E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DB29_02572 95ce989faf1930dcdaa05341bd2eca56 252 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 234 250 3.9E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DB29_02572 95ce989faf1930dcdaa05341bd2eca56 252 SUPERFAMILY SSF52172 1 138 1.71E-32 T 14-10-2018 IPR011006 CheY-like superfamily DB29_02572 95ce989faf1930dcdaa05341bd2eca56 252 SUPERFAMILY SSF46689 203 249 1.7E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DB29_02572 95ce989faf1930dcdaa05341bd2eca56 252 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 204 246 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 DB29_02572 95ce989faf1930dcdaa05341bd2eca56 252 SMART SM00448 2 115 5.0E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DB29_02572 95ce989faf1930dcdaa05341bd2eca56 252 Gene3D G3DSA:1.10.10.60 200 252 1.5E-18 T 14-10-2018 DB29_02572 95ce989faf1930dcdaa05341bd2eca56 252 Pfam PF12833 Helix-turn-helix domain 175 249 2.8E-17 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DB29_03271 9026dae2934d6e994dab018991e9a4b6 195 SUPERFAMILY SSF52096 10 192 5.8E-73 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily DB29_03271 9026dae2934d6e994dab018991e9a4b6 195 PRINTS PR00127 Clp protease catalytic subunit P signature 59 79 7.7E-54 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 DB29_03271 9026dae2934d6e994dab018991e9a4b6 195 PRINTS PR00127 Clp protease catalytic subunit P signature 90 107 7.7E-54 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 DB29_03271 9026dae2934d6e994dab018991e9a4b6 195 PRINTS PR00127 Clp protease catalytic subunit P signature 168 187 7.7E-54 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 DB29_03271 9026dae2934d6e994dab018991e9a4b6 195 PRINTS PR00127 Clp protease catalytic subunit P signature 111 130 7.7E-54 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 DB29_03271 9026dae2934d6e994dab018991e9a4b6 195 PRINTS PR00127 Clp protease catalytic subunit P signature 19 34 7.7E-54 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 DB29_03271 9026dae2934d6e994dab018991e9a4b6 195 Gene3D G3DSA:3.90.226.10 1 194 5.7E-83 T 14-10-2018 DB29_03271 9026dae2934d6e994dab018991e9a4b6 195 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 90 101 - T 14-10-2018 IPR018215 ClpP, Ser active site DB29_03271 9026dae2934d6e994dab018991e9a4b6 195 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 1 191 1.9E-108 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 DB29_03271 9026dae2934d6e994dab018991e9a4b6 195 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 112 125 - T 14-10-2018 IPR033135 ClpP, histidine active site DB29_03271 9026dae2934d6e994dab018991e9a4b6 195 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 3 193 44.808 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 DB29_03271 9026dae2934d6e994dab018991e9a4b6 195 Pfam PF00574 Clp protease 13 192 4.8E-89 T 14-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA DB29_00538 f2534e722a671ef8c4b01fa74f228865 395 Gene3D G3DSA:3.20.20.140 63 359 4.8E-144 T 14-10-2018 DB29_00538 f2534e722a671ef8c4b01fa74f228865 395 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 23 386 4.4E-115 T 14-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 DB29_00538 f2534e722a671ef8c4b01fa74f228865 395 PIRSF PIRSF038994 15 392 1.1E-130 T 14-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 DB29_00538 f2534e722a671ef8c4b01fa74f228865 395 SUPERFAMILY SSF51338 5 391 7.2E-10 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DB29_00538 f2534e722a671ef8c4b01fa74f228865 395 Gene3D G3DSA:2.30.40.10 21 386 4.8E-144 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DB29_00538 f2534e722a671ef8c4b01fa74f228865 395 SUPERFAMILY SSF51556 63 359 4.66E-102 T 14-10-2018 IPR032466 Metal-dependent hydrolase DB29_00538 f2534e722a671ef8c4b01fa74f228865 395 Pfam PF01979 Amidohydrolase family 59 386 6.7E-31 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 DB29_02191 b6428255291688d3908b8f291a6433d3 536 Gene3D G3DSA:3.30.565.10 384 530 1.9E-18 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB29_02191 b6428255291688d3908b8f291a6433d3 536 Pfam PF13188 PAS domain 218 275 1.3E-4 T 14-10-2018 IPR000014 PAS domain DB29_02191 b6428255291688d3908b8f291a6433d3 536 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 327 374 4.3E-9 T 14-10-2018 IPR039506 SpoOB, alpha-helical domain DB29_02191 b6428255291688d3908b8f291a6433d3 536 SUPERFAMILY SSF55874 400 526 1.83E-20 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB29_02191 b6428255291688d3908b8f291a6433d3 536 SUPERFAMILY SSF55890 326 375 3.4E-11 T 14-10-2018 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB GO:0000155|GO:0000160|GO:0016772 DB29_02191 b6428255291688d3908b8f291a6433d3 536 SMART SM00387 424 529 1.3E-8 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DB29_02191 b6428255291688d3908b8f291a6433d3 536 Gene3D G3DSA:3.30.450.20 34 173 1.8E-40 T 14-10-2018 DB29_02191 b6428255291688d3908b8f291a6433d3 536 Gene3D G3DSA:3.30.450.20 201 315 7.2E-14 T 14-10-2018 DB29_02191 b6428255291688d3908b8f291a6433d3 536 SUPERFAMILY SSF103190 41 170 9.42E-35 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily DB29_02191 b6428255291688d3908b8f291a6433d3 536 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 431 527 7.1E-11 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DB29_02191 b6428255291688d3908b8f291a6433d3 536 Pfam PF17203 Single cache domain 3 48 171 2.0E-23 T 14-10-2018 IPR033463 Single cache domain 3 DB29_02191 b6428255291688d3908b8f291a6433d3 536 PRINTS PR00344 Bacterial sensor protein C-terminal signature 489 507 9.8E-6 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB29_02191 b6428255291688d3908b8f291a6433d3 536 PRINTS PR00344 Bacterial sensor protein C-terminal signature 513 526 9.8E-6 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB29_02191 b6428255291688d3908b8f291a6433d3 536 PRINTS PR00344 Bacterial sensor protein C-terminal signature 463 477 9.8E-6 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB29_03229 f9848d406a6db1cdae18f1dc6b6c2eee 289 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 20 223 1.9E-56 T 14-10-2018 IPR003740 Uncharacterised membrane protein YitT DB29_03229 f9848d406a6db1cdae18f1dc6b6c2eee 289 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 229 283 5.4E-21 T 14-10-2018 IPR019264 Domain of unknown function DUF2179 DB29_03229 f9848d406a6db1cdae18f1dc6b6c2eee 289 Gene3D G3DSA:3.30.70.120 202 276 6.5E-24 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal DB29_03229 f9848d406a6db1cdae18f1dc6b6c2eee 289 PIRSF PIRSF006483 3 289 2.6E-81 T 14-10-2018 IPR003740 Uncharacterised membrane protein YitT DB29_03982 9cf13c7b245a800fe077265a4d53d045 90 SUPERFAMILY SSF54565 2 85 6.02E-34 T 14-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB29_03982 9cf13c7b245a800fe077265a4d53d045 90 Pfam PF00886 Ribosomal protein S16 9 67 4.9E-25 T 14-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB29_03982 9cf13c7b245a800fe077265a4d53d045 90 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 2 77 24.592 T 14-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB29_03982 9cf13c7b245a800fe077265a4d53d045 90 Gene3D G3DSA:3.30.1320.10 1 90 2.5E-37 T 14-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB29_03982 9cf13c7b245a800fe077265a4d53d045 90 TIGRFAM TIGR00002 S16: ribosomal protein bS16 3 80 1.3E-34 T 14-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB29_03769 eac9b2496120fb7979d42c3b261d4fd3 265 ProDom PD123329 YQHG BH2818 5 260 7.0E-151 T 14-10-2018 IPR024562 Uncharacterised protein family YqhG DB29_03769 eac9b2496120fb7979d42c3b261d4fd3 265 Pfam PF11079 Bacterial protein YqhG of unknown function 1 259 2.2E-122 T 14-10-2018 IPR024562 Uncharacterised protein family YqhG DB29_01515 dfd8db1f21736edc537bff2805effdff 210 SUPERFAMILY SSF51569 2 202 2.38E-57 T 14-10-2018 DB29_01515 dfd8db1f21736edc537bff2805effdff 210 Gene3D G3DSA:3.20.20.70 1 210 1.8E-68 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DB29_01515 dfd8db1f21736edc537bff2805effdff 210 Pfam PF01081 KDPG and KHG aldolase 9 183 4.1E-35 T 14-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 DB29_01515 dfd8db1f21736edc537bff2805effdff 210 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 5 200 1.1E-46 T 14-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 DB29_03280 73c2477621eff2d0c78b71990e835f3d 510 Pfam PF01676 Metalloenzyme superfamily 4 498 1.8E-80 T 14-10-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 DB29_03280 73c2477621eff2d0c78b71990e835f3d 510 SUPERFAMILY SSF64158 77 310 8.5E-92 T 14-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DB29_03280 73c2477621eff2d0c78b71990e835f3d 510 Gene3D G3DSA:3.40.1450.10 77 312 1.1E-232 T 14-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DB29_03280 73c2477621eff2d0c78b71990e835f3d 510 Gene3D G3DSA:3.40.720.10 5 508 1.1E-232 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 DB29_03280 73c2477621eff2d0c78b71990e835f3d 510 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 82 299 2.7E-83 T 14-10-2018 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DB29_03280 73c2477621eff2d0c78b71990e835f3d 510 TIGRFAM TIGR01307 pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 4 508 5.8E-212 T 14-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DB29_03280 73c2477621eff2d0c78b71990e835f3d 510 PIRSF PIRSF001492 1 510 1.1E-205 T 14-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DB29_03280 73c2477621eff2d0c78b71990e835f3d 510 Hamap MF_01038 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [gpmI]. 4 510 49.834 T 14-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DB29_03280 73c2477621eff2d0c78b71990e835f3d 510 SUPERFAMILY SSF53649 3 508 4.97E-77 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 DB29_03369 8bfdc1dac49dfa2d1cece6d2cb365421 364 Pfam PF04055 Radical SAM superfamily 64 231 3.8E-15 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 DB29_03369 8bfdc1dac49dfa2d1cece6d2cb365421 364 SUPERFAMILY SSF102114 20 349 8.5E-46 T 14-10-2018 DB29_03369 8bfdc1dac49dfa2d1cece6d2cb365421 364 TIGRFAM TIGR03700 mena_SCO4494: putative menaquinone biosynthesis radical SAM enzyme, SCO4494 family 13 361 3.4E-134 T 14-10-2018 IPR022432 Aminodeoxyfutalosine synthase GO:0009234 KEGG: 00130+2.5.1.120|MetaCyc: PWY-7371|MetaCyc: PWY-7374 DB29_03369 8bfdc1dac49dfa2d1cece6d2cb365421 364 TIGRFAM TIGR00423 TIGR00423: radical SAM domain protein, CofH subfamily 56 361 2.1E-101 T 14-10-2018 IPR020050 FO synthase, subunit 2 GO:0016765 KEGG: 00680+2.5.1.77 DB29_03369 8bfdc1dac49dfa2d1cece6d2cb365421 364 PIRSF PIRSF004762 3 364 7.7E-110 T 14-10-2018 DB29_03369 8bfdc1dac49dfa2d1cece6d2cb365421 364 Gene3D G3DSA:3.20.20.70 4 360 7.2E-50 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DB29_03369 8bfdc1dac49dfa2d1cece6d2cb365421 364 Hamap MF_00993 Aminodeoxyfutalosine synthase [mqnE]. 11 364 49.074 T 14-10-2018 IPR022432 Aminodeoxyfutalosine synthase GO:0009234 KEGG: 00130+2.5.1.120|MetaCyc: PWY-7371|MetaCyc: PWY-7374 DB29_00523 c7ba6a082ad574b64471a066ce059e6c 604 SUPERFAMILY SSF90123 25 351 3.66E-75 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DB29_00523 c7ba6a082ad574b64471a066ce059e6c 604 SUPERFAMILY SSF52540 352 599 3.24E-90 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_00523 c7ba6a082ad574b64471a066ce059e6c 604 Gene3D G3DSA:1.20.1560.10 5 349 1.6E-84 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DB29_00523 c7ba6a082ad574b64471a066ce059e6c 604 Pfam PF00664 ABC transporter transmembrane region 46 312 7.9E-49 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 DB29_00523 c7ba6a082ad574b64471a066ce059e6c 604 Gene3D G3DSA:3.40.50.300 359 604 8.5E-91 T 14-10-2018 DB29_00523 c7ba6a082ad574b64471a066ce059e6c 604 SMART SM00382 388 574 7.0E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_00523 c7ba6a082ad574b64471a066ce059e6c 604 Pfam PF00005 ABC transporter 379 528 1.8E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB29_00523 c7ba6a082ad574b64471a066ce059e6c 604 ProSitePatterns PS00211 ABC transporters family signature. 500 514 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB29_01360 f442538d9307f9c2d2cc32af825f27b4 415 Gene3D G3DSA:3.40.190.10 139 399 9.2E-70 T 14-10-2018 DB29_01360 f442538d9307f9c2d2cc32af825f27b4 415 Gene3D G3DSA:3.40.190.10 49 339 9.2E-70 T 14-10-2018 DB29_01360 f442538d9307f9c2d2cc32af825f27b4 415 SUPERFAMILY SSF53850 27 410 4.58E-51 T 14-10-2018 DB29_01360 f442538d9307f9c2d2cc32af825f27b4 415 Pfam PF13416 Bacterial extracellular solute-binding protein 44 333 5.2E-27 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein DB29_01640 9ea985a7b5d4c55d995d2ca635747c2f 508 PRINTS PR00732 Glycosyl hydrolase family 4 signature 140 157 1.3E-17 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 DB29_01640 9ea985a7b5d4c55d995d2ca635747c2f 508 PRINTS PR00732 Glycosyl hydrolase family 4 signature 4 19 1.3E-17 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 DB29_01640 9ea985a7b5d4c55d995d2ca635747c2f 508 PRINTS PR00732 Glycosyl hydrolase family 4 signature 165 176 1.3E-17 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 DB29_01640 9ea985a7b5d4c55d995d2ca635747c2f 508 PRINTS PR00732 Glycosyl hydrolase family 4 signature 94 107 1.3E-17 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 DB29_01640 9ea985a7b5d4c55d995d2ca635747c2f 508 PRINTS PR00732 Glycosyl hydrolase family 4 signature 73 89 1.3E-17 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 DB29_01640 9ea985a7b5d4c55d995d2ca635747c2f 508 PRINTS PR00732 Glycosyl hydrolase family 4 signature 191 203 1.3E-17 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 DB29_01640 9ea985a7b5d4c55d995d2ca635747c2f 508 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 195 413 1.8E-56 T 14-10-2018 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 DB29_01640 9ea985a7b5d4c55d995d2ca635747c2f 508 Gene3D G3DSA:3.90.1820.20 2 443 1.0E-129 T 14-10-2018 DB29_01640 9ea985a7b5d4c55d995d2ca635747c2f 508 SUPERFAMILY SSF51735 2 168 5.31E-49 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_01640 9ea985a7b5d4c55d995d2ca635747c2f 508 SUPERFAMILY SSF56327 171 443 4.49E-69 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 DB29_01640 9ea985a7b5d4c55d995d2ca635747c2f 508 Pfam PF02056 Family 4 glycosyl hydrolase 4 184 2.0E-45 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 DB29_02589 8bec88f0edc34a29490dd9c5c863735e 287 PIRSF PIRSF006232 7 287 1.2E-64 T 14-10-2018 IPR012093 Pirin Reactome: R-HSA-8935690 DB29_02589 8bec88f0edc34a29490dd9c5c863735e 287 Pfam PF05726 Pirin C-terminal cupin domain 172 283 2.8E-23 T 14-10-2018 IPR008778 Pirin, C-terminal domain Reactome: R-HSA-8935690 DB29_02589 8bec88f0edc34a29490dd9c5c863735e 287 SUPERFAMILY SSF51182 8 284 4.74E-70 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily DB29_02589 8bec88f0edc34a29490dd9c5c863735e 287 Gene3D G3DSA:2.60.120.10 141 252 3.6E-71 T 14-10-2018 IPR014710 RmlC-like jelly roll fold DB29_02589 8bec88f0edc34a29490dd9c5c863735e 287 Gene3D G3DSA:2.60.120.10 35 278 3.6E-71 T 14-10-2018 IPR014710 RmlC-like jelly roll fold DB29_02589 8bec88f0edc34a29490dd9c5c863735e 287 Pfam PF02678 Pirin 48 119 6.0E-19 T 14-10-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 DB29_03208 f18a75c9125ead0edacb8d8aa681b222 235 SMART SM00421 169 226 7.6E-25 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DB29_03208 f18a75c9125ead0edacb8d8aa681b222 235 Pfam PF00072 Response regulator receiver domain 11 123 1.0E-30 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DB29_03208 f18a75c9125ead0edacb8d8aa681b222 235 SUPERFAMILY SSF46894 162 231 1.16E-20 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DB29_03208 f18a75c9125ead0edacb8d8aa681b222 235 ProSitePatterns PS00622 LuxR-type HTH domain signature. 186 213 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DB29_03208 f18a75c9125ead0edacb8d8aa681b222 235 SMART SM00448 9 122 8.8E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DB29_03208 f18a75c9125ead0edacb8d8aa681b222 235 SUPERFAMILY SSF52172 8 140 5.83E-33 T 14-10-2018 IPR011006 CheY-like superfamily DB29_03208 f18a75c9125ead0edacb8d8aa681b222 235 Pfam PF00196 Bacterial regulatory proteins, luxR family 171 224 1.2E-21 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DB29_03208 f18a75c9125ead0edacb8d8aa681b222 235 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 172 186 6.0E-14 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DB29_03208 f18a75c9125ead0edacb8d8aa681b222 235 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 186 202 6.0E-14 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DB29_03208 f18a75c9125ead0edacb8d8aa681b222 235 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 202 214 6.0E-14 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DB29_03208 f18a75c9125ead0edacb8d8aa681b222 235 Gene3D G3DSA:3.40.50.12740 9 232 6.8E-68 T 14-10-2018 DB29_02061 8285749f6c7c52ef49e25d6ce634add5 125 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 4 113 1.0E-30 T 14-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 DB29_02061 8285749f6c7c52ef49e25d6ce634add5 125 SUPERFAMILY SSF54211 3 114 6.83E-36 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DB29_02061 8285749f6c7c52ef49e25d6ce634add5 125 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 54 68 - T 14-10-2018 IPR020539 Ribonuclease P, conserved site GO:0004526 DB29_02061 8285749f6c7c52ef49e25d6ce634add5 125 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 4 114 20.922 T 14-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 DB29_02061 8285749f6c7c52ef49e25d6ce634add5 125 Pfam PF00825 Ribonuclease P 4 111 3.3E-35 T 14-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 DB29_02061 8285749f6c7c52ef49e25d6ce634add5 125 Gene3D G3DSA:3.30.230.10 1 116 9.4E-40 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DB29_02061 8285749f6c7c52ef49e25d6ce634add5 125 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 10 104 1.0E-49 T 14-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 DB29_04297 1885f1156b7b7093b30824114f796f51 942 SUPERFAMILY SSF52540 276 900 7.62E-25 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_04297 1885f1156b7b7093b30824114f796f51 942 Pfam PF00929 Exonuclease 6 162 7.3E-31 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III DB29_04297 1885f1156b7b7093b30824114f796f51 942 Hamap MF_02206 3'-5' exonuclease DinG [dinG]. 1 938 27.935 T 14-10-2018 IPR006310 3'-5' exonuclease DinG GO:0005524|GO:0008408 DB29_04297 1885f1156b7b7093b30824114f796f51 942 Gene3D G3DSA:3.30.420.10 1 171 6.6E-49 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 DB29_04297 1885f1156b7b7093b30824114f796f51 942 Gene3D G3DSA:3.40.50.300 734 930 6.6E-40 T 14-10-2018 DB29_04297 1885f1156b7b7093b30824114f796f51 942 Pfam PF04851 Type III restriction enzyme, res subunit 260 475 3.1E-7 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 DB29_04297 1885f1156b7b7093b30824114f796f51 942 SMART SM00487 258 519 1.8E-6 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DB29_04297 1885f1156b7b7093b30824114f796f51 942 SMART SM00479 4 171 9.2E-49 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III DB29_04297 1885f1156b7b7093b30824114f796f51 942 SUPERFAMILY SSF53098 4 183 2.89E-53 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily DB29_04297 1885f1156b7b7093b30824114f796f51 942 TIGRFAM TIGR01407 dinG_rel: putative DnaQ family exonuclease/DinG family helicase 5 936 1.9E-266 T 14-10-2018 IPR006310 3'-5' exonuclease DinG GO:0005524|GO:0008408 DB29_04297 1885f1156b7b7093b30824114f796f51 942 Gene3D G3DSA:3.40.50.300 261 517 7.0E-46 T 14-10-2018 DB29_04297 1885f1156b7b7093b30824114f796f51 942 Pfam PF13307 Helicase C-terminal domain 753 918 3.2E-38 T 14-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 DB29_04297 1885f1156b7b7093b30824114f796f51 942 SMART SM00491 771 906 1.4E-32 T 14-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 DB29_04297 1885f1156b7b7093b30824114f796f51 942 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 3 171 1.7E-28 T 14-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DB29_03870 0e220d2749cfc45b06d42a61e9940a7e 612 SUPERFAMILY SSF54980 304 389 7.19E-16 T 14-10-2018 IPR035647 EF-G domain III/V-like DB29_03870 0e220d2749cfc45b06d42a61e9940a7e 612 Gene3D G3DSA:3.30.70.240 391 484 8.2E-129 T 14-10-2018 DB29_03870 0e220d2749cfc45b06d42a61e9940a7e 612 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 8 136 3.0E-22 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 DB29_03870 0e220d2749cfc45b06d42a61e9940a7e 612 PRINTS PR00315 GTP-binding elongation factor signature 89 100 3.2E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DB29_03870 0e220d2749cfc45b06d42a61e9940a7e 612 PRINTS PR00315 GTP-binding elongation factor signature 9 22 3.2E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DB29_03870 0e220d2749cfc45b06d42a61e9940a7e 612 PRINTS PR00315 GTP-binding elongation factor signature 53 61 3.2E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DB29_03870 0e220d2749cfc45b06d42a61e9940a7e 612 PRINTS PR00315 GTP-binding elongation factor signature 125 134 3.2E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DB29_03870 0e220d2749cfc45b06d42a61e9940a7e 612 PRINTS PR00315 GTP-binding elongation factor signature 73 83 3.2E-14 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DB29_03870 0e220d2749cfc45b06d42a61e9940a7e 612 Gene3D G3DSA:2.40.50.250 485 601 8.2E-129 T 14-10-2018 DB29_03870 0e220d2749cfc45b06d42a61e9940a7e 612 Pfam PF14492 Elongation Factor G, domain II 330 379 1.9E-7 T 14-10-2018 DB29_03870 0e220d2749cfc45b06d42a61e9940a7e 612 Gene3D G3DSA:3.40.50.300 4 200 4.8E-67 T 14-10-2018 DB29_03870 0e220d2749cfc45b06d42a61e9940a7e 612 Pfam PF03144 Elongation factor Tu domain 2 221 291 3.7E-13 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 DB29_03870 0e220d2749cfc45b06d42a61e9940a7e 612 Pfam PF00009 Elongation factor Tu GTP binding domain 6 197 3.4E-55 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DB29_03870 0e220d2749cfc45b06d42a61e9940a7e 612 SMART SM00838 400 485 6.8E-5 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like DB29_03870 0e220d2749cfc45b06d42a61e9940a7e 612 SUPERFAMILY SSF54980 400 515 2.01E-30 T 14-10-2018 IPR035647 EF-G domain III/V-like DB29_03870 0e220d2749cfc45b06d42a61e9940a7e 612 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 7 601 3.5E-292 T 14-10-2018 IPR006298 GTP-binding protein TypA GO:0005525 DB29_03870 0e220d2749cfc45b06d42a61e9940a7e 612 SUPERFAMILY SSF52540 4 208 3.48E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_03870 0e220d2749cfc45b06d42a61e9940a7e 612 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 46 61 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site DB29_03870 0e220d2749cfc45b06d42a61e9940a7e 612 Gene3D G3DSA:2.40.30.10 201 301 2.7E-33 T 14-10-2018 DB29_03870 0e220d2749cfc45b06d42a61e9940a7e 612 Gene3D G3DSA:3.30.70.870 308 592 8.2E-129 T 14-10-2018 DB29_03870 0e220d2749cfc45b06d42a61e9940a7e 612 Pfam PF00679 Elongation factor G C-terminus 399 478 1.9E-25 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like DB29_03870 0e220d2749cfc45b06d42a61e9940a7e 612 SUPERFAMILY SSF50447 154 301 7.49E-33 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily DB29_02643 e5077d741520546934669ed01620bed3 527 Pfam PF02378 Phosphotransferase system, EIIC 9 343 5.3E-67 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 DB29_02643 e5077d741520546934669ed01620bed3 527 Pfam PF00367 phosphotransferase system, EIIB 457 486 1.2E-14 T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 DB29_02643 e5077d741520546934669ed01620bed3 527 TIGRFAM TIGR02005 PTS-IIBC-alpha: PTS system, alpha-glucoside-specific IIBC component 1 525 6.5E-250 T 14-10-2018 IPR010975 Phosphotransferase system, alpha-glucoside-specific IIBC component GO:0008982|GO:0009401 DB29_02643 e5077d741520546934669ed01620bed3 527 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 465 482 - T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 DB29_02643 e5077d741520546934669ed01620bed3 527 Gene3D G3DSA:3.30.1360.60 447 527 4.6E-21 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 DB29_02643 e5077d741520546934669ed01620bed3 527 SUPERFAMILY SSF55604 453 524 3.66E-17 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 DB29_02643 e5077d741520546934669ed01620bed3 527 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 406 513 3.5E-14 T 14-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 DB29_03803 d22dd1591979be84e9a818b61f503432 79 SUPERFAMILY SSF116842 3 70 3.01E-19 T 14-10-2018 DB29_03803 d22dd1591979be84e9a818b61f503432 79 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 8 68 14.083 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 DB29_03803 d22dd1591979be84e9a818b61f503432 79 Gene3D G3DSA:1.10.287.1040 2 78 5.7E-19 T 14-10-2018 IPR037004 Exonuclease VII, small subunit superfamily GO:0006308|GO:0008855|GO:0009318 DB29_03803 d22dd1591979be84e9a818b61f503432 79 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 1 47 1.0E-20 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 DB29_03803 d22dd1591979be84e9a818b61f503432 79 PIRSF PIRSF006488 1 79 1.4E-17 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 DB29_03803 d22dd1591979be84e9a818b61f503432 79 Pfam PF02609 Exonuclease VII small subunit 9 59 5.9E-19 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 DB29_03803 d22dd1591979be84e9a818b61f503432 79 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 9 63 1.8E-21 T 14-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 DB29_01510 2a43bba167e1cc66743644e2d19d030c 271 Pfam PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) 29 251 7.9E-55 T 14-10-2018 IPR019108 Cytochrome c oxidase caa3-type, assembly factor CtaG-related DB29_00686 abe37ddf0c28194647a964c4a0c5795b 298 Gene3D G3DSA:3.50.50.60 3 286 6.4E-90 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB29_00686 abe37ddf0c28194647a964c4a0c5795b 298 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 2 282 3.8E-25 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DB29_00686 abe37ddf0c28194647a964c4a0c5795b 298 Gene3D G3DSA:3.50.50.60 114 225 6.4E-90 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB29_00686 abe37ddf0c28194647a964c4a0c5795b 298 SUPERFAMILY SSF51905 2 289 5.56E-35 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB29_00686 abe37ddf0c28194647a964c4a0c5795b 298 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 123 135 2.9E-16 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DB29_00686 abe37ddf0c28194647a964c4a0c5795b 298 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 256 274 2.9E-16 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DB29_00686 abe37ddf0c28194647a964c4a0c5795b 298 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 3 25 2.9E-16 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DB29_00686 abe37ddf0c28194647a964c4a0c5795b 298 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 101 109 2.9E-16 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DB29_00686 abe37ddf0c28194647a964c4a0c5795b 298 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 246 268 1.6E-15 T 14-10-2018 DB29_00686 abe37ddf0c28194647a964c4a0c5795b 298 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 1.6E-15 T 14-10-2018 DB29_00686 abe37ddf0c28194647a964c4a0c5795b 298 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 100 118 1.6E-15 T 14-10-2018 DB29_04312 b35cd883052b76694a07118041615972 171 Gene3D G3DSA:1.10.1660.10 1 66 1.3E-21 T 14-10-2018 DB29_04312 b35cd883052b76694a07118041615972 171 Pfam PF13411 MerR HTH family regulatory protein 1 62 2.6E-12 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DB29_04312 b35cd883052b76694a07118041615972 171 SUPERFAMILY SSF46955 1 99 6.87E-11 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily DB29_04312 b35cd883052b76694a07118041615972 171 Hamap MF_01170 Chromosome-anchoring protein RacA [racA]. 1 171 20.559 T 14-10-2018 IPR023522 Chromosome-anchoring protein RacA DB29_03502 ef280770f9ac28f5bcc19180fdb25e3f 328 PRINTS PR00127 Clp protease catalytic subunit P signature 133 150 7.8E-5 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 DB29_03502 ef280770f9ac28f5bcc19180fdb25e3f 328 PRINTS PR00127 Clp protease catalytic subunit P signature 239 258 7.8E-5 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 DB29_03502 ef280770f9ac28f5bcc19180fdb25e3f 328 PRINTS PR00127 Clp protease catalytic subunit P signature 99 119 7.8E-5 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 DB29_03502 ef280770f9ac28f5bcc19180fdb25e3f 328 Gene3D G3DSA:3.40.1750.20 166 232 1.0E-78 T 14-10-2018 DB29_03502 ef280770f9ac28f5bcc19180fdb25e3f 328 SUPERFAMILY SSF52096 52 262 3.68E-38 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily DB29_03502 ef280770f9ac28f5bcc19180fdb25e3f 328 Gene3D G3DSA:3.90.226.10 58 270 1.0E-78 T 14-10-2018 DB29_03502 ef280770f9ac28f5bcc19180fdb25e3f 328 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 56 273 4.1E-70 T 14-10-2018 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 DB29_03502 ef280770f9ac28f5bcc19180fdb25e3f 328 Pfam PF01343 Peptidase family S49 126 273 2.4E-50 T 14-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 DB29_03197 32cdd21646a3b235d88d3c7b8434644c 1398 SUPERFAMILY SSF50044 813 858 1.31E-5 T 14-10-2018 IPR036028 SH3-like domain superfamily GO:0005515 DB29_03197 32cdd21646a3b235d88d3c7b8434644c 1398 SMART SM00287 933 994 2.4E-8 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type DB29_03197 32cdd21646a3b235d88d3c7b8434644c 1398 SMART SM00287 858 920 6.1E-12 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type DB29_03197 32cdd21646a3b235d88d3c7b8434644c 1398 SMART SM00287 716 778 9.5E-12 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type DB29_03197 32cdd21646a3b235d88d3c7b8434644c 1398 SMART SM00287 1334 1396 18.0 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type DB29_03197 32cdd21646a3b235d88d3c7b8434644c 1398 SMART SM00287 576 636 4.5E-12 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type DB29_03197 32cdd21646a3b235d88d3c7b8434644c 1398 SMART SM00287 645 707 9.5E-12 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type DB29_03197 32cdd21646a3b235d88d3c7b8434644c 1398 SMART SM00287 286 348 7.6E-10 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type DB29_03197 32cdd21646a3b235d88d3c7b8434644c 1398 SMART SM00287 433 494 2.7E-10 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type DB29_03197 32cdd21646a3b235d88d3c7b8434644c 1398 SMART SM00287 364 424 1.9E-7 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type DB29_03197 32cdd21646a3b235d88d3c7b8434644c 1398 SMART SM00287 787 849 9.5E-12 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type DB29_03197 32cdd21646a3b235d88d3c7b8434644c 1398 SMART SM00287 505 565 4.5E-12 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type DB29_03197 32cdd21646a3b235d88d3c7b8434644c 1398 SMART SM00047 114 265 4.0E-52 T 14-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 DB29_03197 32cdd21646a3b235d88d3c7b8434644c 1398 SUPERFAMILY SSF50044 884 923 5.53E-6 T 14-10-2018 IPR036028 SH3-like domain superfamily GO:0005515 DB29_03197 32cdd21646a3b235d88d3c7b8434644c 1398 SUPERFAMILY SSF50044 671 716 1.31E-5 T 14-10-2018 IPR036028 SH3-like domain superfamily GO:0005515 DB29_03197 32cdd21646a3b235d88d3c7b8434644c 1398 SUPERFAMILY SSF50044 958 997 3.18E-5 T 14-10-2018 IPR036028 SH3-like domain superfamily GO:0005515 DB29_03197 32cdd21646a3b235d88d3c7b8434644c 1398 SUPERFAMILY SSF50044 742 787 1.31E-5 T 14-10-2018 IPR036028 SH3-like domain superfamily GO:0005515 DB29_03197 32cdd21646a3b235d88d3c7b8434644c 1398 SUPERFAMILY SSF50044 458 507 2.98E-6 T 14-10-2018 IPR036028 SH3-like domain superfamily GO:0005515 DB29_03197 32cdd21646a3b235d88d3c7b8434644c 1398 Gene3D G3DSA:2.30.30.40 364 430 1.0E-18 T 14-10-2018 DB29_03197 32cdd21646a3b235d88d3c7b8434644c 1398 Gene3D G3DSA:2.30.30.40 935 998 8.3E-19 T 14-10-2018 DB29_03197 32cdd21646a3b235d88d3c7b8434644c 1398 Pfam PF08239 Bacterial SH3 domain 296 346 1.1E-14 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type DB29_03197 32cdd21646a3b235d88d3c7b8434644c 1398 Pfam PF08239 Bacterial SH3 domain 655 704 2.8E-15 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type DB29_03197 32cdd21646a3b235d88d3c7b8434644c 1398 Pfam PF08239 Bacterial SH3 domain 513 562 2.8E-15 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type DB29_03197 32cdd21646a3b235d88d3c7b8434644c 1398 Pfam PF08239 Bacterial SH3 domain 868 917 4.2E-16 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type DB29_03197 32cdd21646a3b235d88d3c7b8434644c 1398 Pfam PF08239 Bacterial SH3 domain 371 421 3.2E-16 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type DB29_03197 32cdd21646a3b235d88d3c7b8434644c 1398 Pfam PF08239 Bacterial SH3 domain 442 491 3.4E-16 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type DB29_03197 32cdd21646a3b235d88d3c7b8434644c 1398 Pfam PF08239 Bacterial SH3 domain 726 775 2.8E-15 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type DB29_03197 32cdd21646a3b235d88d3c7b8434644c 1398 Pfam PF08239 Bacterial SH3 domain 797 846 2.8E-15 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type DB29_03197 32cdd21646a3b235d88d3c7b8434644c 1398 Pfam PF08239 Bacterial SH3 domain 584 633 2.8E-15 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type DB29_03197 32cdd21646a3b235d88d3c7b8434644c 1398 Pfam PF08239 Bacterial SH3 domain 941 991 3.4E-14 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type DB29_03197 32cdd21646a3b235d88d3c7b8434644c 1398 Gene3D G3DSA:2.30.30.40 648 706 2.9E-19 T 14-10-2018 DB29_03197 32cdd21646a3b235d88d3c7b8434644c 1398 Gene3D G3DSA:2.30.30.40 506 564 2.9E-19 T 14-10-2018 DB29_03197 32cdd21646a3b235d88d3c7b8434644c 1398 Gene3D G3DSA:2.30.30.40 861 919 1.8E-20 T 14-10-2018 DB29_03197 32cdd21646a3b235d88d3c7b8434644c 1398 Gene3D G3DSA:2.30.30.40 577 635 2.9E-19 T 14-10-2018 DB29_03197 32cdd21646a3b235d88d3c7b8434644c 1398 Gene3D G3DSA:2.30.30.40 435 493 2.2E-20 T 14-10-2018 DB29_03197 32cdd21646a3b235d88d3c7b8434644c 1398 Gene3D G3DSA:2.30.30.40 790 848 2.9E-19 T 14-10-2018 DB29_03197 32cdd21646a3b235d88d3c7b8434644c 1398 Gene3D G3DSA:2.30.30.40 719 777 2.9E-19 T 14-10-2018 DB29_03197 32cdd21646a3b235d88d3c7b8434644c 1398 Gene3D G3DSA:2.30.30.40 291 347 1.0E-18 T 14-10-2018 DB29_03197 32cdd21646a3b235d88d3c7b8434644c 1398 Gene3D G3DSA:1.10.530.10 122 258 6.3E-6 T 14-10-2018 DB29_03197 32cdd21646a3b235d88d3c7b8434644c 1398 SUPERFAMILY SSF50044 529 578 8.93E-6 T 14-10-2018 IPR036028 SH3-like domain superfamily GO:0005515 DB29_03197 32cdd21646a3b235d88d3c7b8434644c 1398 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 127 253 1.4E-11 T 14-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 DB29_03197 32cdd21646a3b235d88d3c7b8434644c 1398 SUPERFAMILY SSF50044 600 645 1.26E-5 T 14-10-2018 IPR036028 SH3-like domain superfamily GO:0005515 DB29_03197 32cdd21646a3b235d88d3c7b8434644c 1398 SUPERFAMILY SSF50044 390 435 1.55E-5 T 14-10-2018 IPR036028 SH3-like domain superfamily GO:0005515 DB29_01552 d24a77ca166260bb827cdd53a8bac621 236 SMART SM00345 11 70 1.6E-16 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DB29_01552 d24a77ca166260bb827cdd53a8bac621 236 Pfam PF00392 Bacterial regulatory proteins, gntR family 8 70 2.0E-15 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DB29_01552 d24a77ca166260bb827cdd53a8bac621 236 Pfam PF07702 UTRA domain 92 228 9.0E-32 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 DB29_01552 d24a77ca166260bb827cdd53a8bac621 236 Gene3D G3DSA:1.10.10.10 3 70 8.8E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_01552 d24a77ca166260bb827cdd53a8bac621 236 SMART SM00866 91 229 1.3E-31 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 DB29_01552 d24a77ca166260bb827cdd53a8bac621 236 Gene3D G3DSA:3.40.1410.10 79 233 1.6E-34 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily DB29_01552 d24a77ca166260bb827cdd53a8bac621 236 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 30 44 2.4E-5 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DB29_01552 d24a77ca166260bb827cdd53a8bac621 236 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 44 60 2.4E-5 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DB29_01552 d24a77ca166260bb827cdd53a8bac621 236 SUPERFAMILY SSF46785 4 74 6.41E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_01552 d24a77ca166260bb827cdd53a8bac621 236 SUPERFAMILY SSF64288 60 233 1.88E-40 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily DB29_00059 3aac23336df57e276d33053f9558336e 521 PIRSF PIRSF000110 17 519 1.1E-187 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 DB29_00059 3aac23336df57e276d33053f9558336e 521 Gene3D G3DSA:3.40.50.720 30 206 6.7E-60 T 14-10-2018 DB29_00059 3aac23336df57e276d33053f9558336e 521 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 34 517 83.462 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 DB29_00059 3aac23336df57e276d33053f9558336e 521 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 174 187 1.5E-46 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 DB29_00059 3aac23336df57e276d33053f9558336e 521 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 268 284 1.5E-46 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 DB29_00059 3aac23336df57e276d33053f9558336e 521 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 359 385 1.5E-46 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 DB29_00059 3aac23336df57e276d33053f9558336e 521 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 198 226 1.5E-46 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 DB29_00059 3aac23336df57e276d33053f9558336e 521 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 250 267 1.5E-46 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 DB29_00059 3aac23336df57e276d33053f9558336e 521 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 208 214 - T 14-10-2018 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 DB29_00059 3aac23336df57e276d33053f9558336e 521 SUPERFAMILY SSF51735 31 221 1.38E-60 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_00059 3aac23336df57e276d33053f9558336e 521 SUPERFAMILY SSF55347 213 516 4.58E-111 T 14-10-2018 DB29_00059 3aac23336df57e276d33053f9558336e 521 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 38 218 2.1E-63 T 14-10-2018 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 DB29_00059 3aac23336df57e276d33053f9558336e 521 Gene3D G3DSA:3.30.360.10 207 517 1.1E-118 T 14-10-2018 DB29_00059 3aac23336df57e276d33053f9558336e 521 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 34 516 7.9E-194 T 14-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 DB29_00059 3aac23336df57e276d33053f9558336e 521 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 221 515 2.2E-111 T 14-10-2018 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 DB29_02912 d36b2a57e0594f71397ad8ce52a79da4 267 Pfam PF01061 ABC-2 type transporter 18 225 2.5E-21 T 14-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 DB29_02576 371a606cbcc4c8a50bb98e7276f07289 292 Hamap MF_01987 Ribokinase [rbsK]. 1 288 23.64 T 14-10-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 DB29_02576 371a606cbcc4c8a50bb98e7276f07289 292 TIGRFAM TIGR02152 D_ribokin_bact: ribokinase 2 285 8.5E-100 T 14-10-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 DB29_02576 371a606cbcc4c8a50bb98e7276f07289 292 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 233 246 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 DB29_02576 371a606cbcc4c8a50bb98e7276f07289 292 SUPERFAMILY SSF53613 2 289 6.08E-81 T 14-10-2018 IPR029056 Ribokinase-like DB29_02576 371a606cbcc4c8a50bb98e7276f07289 292 Pfam PF00294 pfkB family carbohydrate kinase 2 281 9.5E-71 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB DB29_02576 371a606cbcc4c8a50bb98e7276f07289 292 PRINTS PR00990 Ribokinase signature 4 25 1.6E-32 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 DB29_02576 371a606cbcc4c8a50bb98e7276f07289 292 PRINTS PR00990 Ribokinase signature 102 115 1.6E-32 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 DB29_02576 371a606cbcc4c8a50bb98e7276f07289 292 PRINTS PR00990 Ribokinase signature 170 185 1.6E-32 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 DB29_02576 371a606cbcc4c8a50bb98e7276f07289 292 PRINTS PR00990 Ribokinase signature 204 215 1.6E-32 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 DB29_02576 371a606cbcc4c8a50bb98e7276f07289 292 PRINTS PR00990 Ribokinase signature 31 50 1.6E-32 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 DB29_02576 371a606cbcc4c8a50bb98e7276f07289 292 Gene3D G3DSA:3.40.1190.20 1 289 4.3E-95 T 14-10-2018 IPR029056 Ribokinase-like DB29_02894 b3de34862a364e83ab077cf02915a746 343 Pfam PF13377 Periplasmic binding protein-like domain 177 338 2.1E-41 T 14-10-2018 DB29_02894 b3de34862a364e83ab077cf02915a746 343 SUPERFAMILY SSF53822 73 339 1.96E-64 T 14-10-2018 IPR028082 Periplasmic binding protein-like I DB29_02894 b3de34862a364e83ab077cf02915a746 343 Pfam PF00356 Bacterial regulatory proteins, lacI family 8 53 7.1E-19 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DB29_02894 b3de34862a364e83ab077cf02915a746 343 Gene3D G3DSA:3.40.50.2300 61 315 5.5E-67 T 14-10-2018 DB29_02894 b3de34862a364e83ab077cf02915a746 343 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 18 28 4.2E-6 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DB29_02894 b3de34862a364e83ab077cf02915a746 343 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 8 18 4.2E-6 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DB29_02894 b3de34862a364e83ab077cf02915a746 343 Gene3D G3DSA:1.10.260.40 1 60 3.2E-22 T 14-10-2018 DB29_02894 b3de34862a364e83ab077cf02915a746 343 SUPERFAMILY SSF47413 6 64 1.13E-17 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DB29_02894 b3de34862a364e83ab077cf02915a746 343 Gene3D G3DSA:3.40.50.2300 169 299 5.5E-67 T 14-10-2018 DB29_02894 b3de34862a364e83ab077cf02915a746 343 SMART SM00354 6 76 1.1E-26 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DB29_02894 b3de34862a364e83ab077cf02915a746 343 ProSitePatterns PS00356 LacI-type HTH domain signature. 9 27 - T 14-10-2018 DB29_00557 f4435929575118b4a90e3c01b5797433 631 Pfam PF08298 PrkA AAA domain 22 369 1.4E-150 T 14-10-2018 IPR013153 PrkA AAA domain DB29_00557 f4435929575118b4a90e3c01b5797433 631 SUPERFAMILY SSF52540 67 460 3.6E-12 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_00557 f4435929575118b4a90e3c01b5797433 631 PIRSF PIRSF000549 1 631 2.8E-258 T 14-10-2018 IPR016230 Serine-protein kinase, PrkA GO:0004672 DB29_00557 f4435929575118b4a90e3c01b5797433 631 Pfam PF06798 PrkA serine protein kinase C-terminal domain 375 624 6.2E-90 T 14-10-2018 IPR010650 PrkA C-terminal domain DB29_00557 f4435929575118b4a90e3c01b5797433 631 Gene3D G3DSA:3.40.50.300 68 320 6.1E-8 T 14-10-2018 DB29_00557 f4435929575118b4a90e3c01b5797433 631 SMART SM00763 21 371 3.0E-195 T 14-10-2018 IPR013153 PrkA AAA domain DB29_01619 33e19c7e2620fcaf8de93664b913647e 340 Gene3D G3DSA:3.30.360.10 127 321 5.0E-99 T 14-10-2018 DB29_01619 33e19c7e2620fcaf8de93664b913647e 340 Gene3D G3DSA:3.40.50.720 7 307 5.0E-99 T 14-10-2018 DB29_01619 33e19c7e2620fcaf8de93664b913647e 340 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 7 126 1.5E-28 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 DB29_01619 33e19c7e2620fcaf8de93664b913647e 340 SUPERFAMILY SSF55347 131 310 2.78E-29 T 14-10-2018 DB29_01619 33e19c7e2620fcaf8de93664b913647e 340 SUPERFAMILY SSF51735 5 154 1.26E-43 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_01619 33e19c7e2620fcaf8de93664b913647e 340 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 138 245 6.6E-14 T 14-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 DB29_03486 1b51892bd53fedf7095dabf4c9fcfc86 357 Gene3D G3DSA:1.10.260.40 26 85 8.6E-29 T 14-10-2018 DB29_03486 1b51892bd53fedf7095dabf4c9fcfc86 357 Pfam PF00356 Bacterial regulatory proteins, lacI family 29 74 1.2E-20 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DB29_03486 1b51892bd53fedf7095dabf4c9fcfc86 357 Gene3D G3DSA:3.40.50.2300 88 335 5.0E-93 T 14-10-2018 DB29_03486 1b51892bd53fedf7095dabf4c9fcfc86 357 Pfam PF13377 Periplasmic binding protein-like domain 194 356 1.2E-34 T 14-10-2018 DB29_03486 1b51892bd53fedf7095dabf4c9fcfc86 357 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 29 39 9.0E-7 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DB29_03486 1b51892bd53fedf7095dabf4c9fcfc86 357 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 39 49 9.0E-7 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DB29_03486 1b51892bd53fedf7095dabf4c9fcfc86 357 SUPERFAMILY SSF47413 27 85 5.2E-20 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DB29_03486 1b51892bd53fedf7095dabf4c9fcfc86 357 SUPERFAMILY SSF53822 87 357 9.79E-90 T 14-10-2018 IPR028082 Periplasmic binding protein-like I DB29_03486 1b51892bd53fedf7095dabf4c9fcfc86 357 SMART SM00354 27 97 4.2E-40 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DB29_03486 1b51892bd53fedf7095dabf4c9fcfc86 357 ProSitePatterns PS00356 LacI-type HTH domain signature. 30 48 - T 14-10-2018 DB29_03486 1b51892bd53fedf7095dabf4c9fcfc86 357 Gene3D G3DSA:3.40.50.2300 186 316 5.0E-93 T 14-10-2018 DB29_03486 1b51892bd53fedf7095dabf4c9fcfc86 357 TIGRFAM TIGR01481 ccpA: catabolite control protein A 26 357 6.5E-162 T 14-10-2018 IPR006377 Catabolite control protein A GO:0006355 DB29_03556 03d72aa0cf16a1821b6fffdc77c50e7e 489 Gene3D G3DSA:3.40.710.10 274 485 6.3E-47 T 14-10-2018 DB29_03556 03d72aa0cf16a1821b6fffdc77c50e7e 489 TIGRFAM TIGR00666 PBP4: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 62 465 1.7E-107 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 DB29_03556 03d72aa0cf16a1821b6fffdc77c50e7e 489 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 377 391 5.2E-23 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 DB29_03556 03d72aa0cf16a1821b6fffdc77c50e7e 489 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 442 455 5.2E-23 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 DB29_03556 03d72aa0cf16a1821b6fffdc77c50e7e 489 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 306 328 5.2E-23 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 DB29_03556 03d72aa0cf16a1821b6fffdc77c50e7e 489 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 74 93 5.2E-23 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 DB29_03556 03d72aa0cf16a1821b6fffdc77c50e7e 489 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 362 376 5.2E-23 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 DB29_03556 03d72aa0cf16a1821b6fffdc77c50e7e 489 Gene3D G3DSA:3.50.80.20 102 201 3.4E-24 T 14-10-2018 DB29_03556 03d72aa0cf16a1821b6fffdc77c50e7e 489 SUPERFAMILY SSF56601 34 481 5.32E-91 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like DB29_03556 03d72aa0cf16a1821b6fffdc77c50e7e 489 Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family 36 480 5.6E-121 T 14-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 DB29_03556 03d72aa0cf16a1821b6fffdc77c50e7e 489 Gene3D G3DSA:3.40.710.10 39 101 3.5E-8 T 14-10-2018 DB29_02013 8a351316e83cbdba8a57843074eda94e 502 Gene3D G3DSA:3.30.565.10 343 498 1.0E-40 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB29_02013 8a351316e83cbdba8a57843074eda94e 502 Pfam PF00512 His Kinase A (phospho-acceptor) domain 277 339 1.3E-15 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DB29_02013 8a351316e83cbdba8a57843074eda94e 502 SUPERFAMILY SSF55874 330 493 1.57E-38 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB29_02013 8a351316e83cbdba8a57843074eda94e 502 Gene3D G3DSA:1.10.287.130 260 340 5.8E-23 T 14-10-2018 DB29_02013 8a351316e83cbdba8a57843074eda94e 502 SMART SM00065 9 155 4.5E-10 T 14-10-2018 IPR003018 GAF domain GO:0005515 DB29_02013 8a351316e83cbdba8a57843074eda94e 502 Gene3D G3DSA:3.30.450.40 7 152 1.4E-33 T 14-10-2018 IPR029016 GAF-like domain superfamily DB29_02013 8a351316e83cbdba8a57843074eda94e 502 SUPERFAMILY SSF55785 150 258 2.59E-5 T 14-10-2018 IPR035965 PAS domain superfamily DB29_02013 8a351316e83cbdba8a57843074eda94e 502 Gene3D G3DSA:3.30.450.20 153 258 2.3E-8 T 14-10-2018 DB29_02013 8a351316e83cbdba8a57843074eda94e 502 PRINTS PR00344 Bacterial sensor protein C-terminal signature 455 473 4.3E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB29_02013 8a351316e83cbdba8a57843074eda94e 502 PRINTS PR00344 Bacterial sensor protein C-terminal signature 479 492 4.3E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB29_02013 8a351316e83cbdba8a57843074eda94e 502 PRINTS PR00344 Bacterial sensor protein C-terminal signature 424 438 4.3E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB29_02013 8a351316e83cbdba8a57843074eda94e 502 PRINTS PR00344 Bacterial sensor protein C-terminal signature 442 452 4.3E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB29_02013 8a351316e83cbdba8a57843074eda94e 502 SUPERFAMILY SSF55781 9 157 1.57E-20 T 14-10-2018 DB29_02013 8a351316e83cbdba8a57843074eda94e 502 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 384 493 3.9E-20 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DB29_02013 8a351316e83cbdba8a57843074eda94e 502 SUPERFAMILY SSF47384 272 339 1.28E-14 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DB29_02013 8a351316e83cbdba8a57843074eda94e 502 Pfam PF13492 GAF domain 9 147 1.5E-11 T 14-10-2018 IPR003018 GAF domain GO:0005515 DB29_02013 8a351316e83cbdba8a57843074eda94e 502 SMART SM00388 275 341 3.5E-14 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DB29_02013 8a351316e83cbdba8a57843074eda94e 502 SMART SM00387 383 495 7.3E-29 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DB29_02414 afe21f3df5c8d865167cea926378f534 628 SUPERFAMILY SSF51261 472 618 3.31E-55 T 14-10-2018 IPR011055 Duplicated hybrid motif DB29_02414 afe21f3df5c8d865167cea926378f534 628 Gene3D G3DSA:3.30.1360.60 1 77 3.4E-26 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 DB29_02414 afe21f3df5c8d865167cea926378f534 628 TIGRFAM TIGR01995 PTS-II-ABC-beta: PTS system, beta-glucoside-specific IIABC component 3 620 8.0E-241 T 14-10-2018 IPR011297 Phosphotransferase system, beta-glucoside-specific IIABC component GO:0005886|GO:0008982|GO:0009401 DB29_02414 afe21f3df5c8d865167cea926378f534 628 Pfam PF02378 Phosphotransferase system, EIIC 111 390 2.3E-31 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 DB29_02414 afe21f3df5c8d865167cea926378f534 628 Pfam PF00367 phosphotransferase system, EIIB 8 41 1.1E-13 T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 DB29_02414 afe21f3df5c8d865167cea926378f534 628 Gene3D G3DSA:2.70.70.10 463 621 9.2E-59 T 14-10-2018 IPR011055 Duplicated hybrid motif DB29_02414 afe21f3df5c8d865167cea926378f534 628 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 475 598 8.8E-53 T 14-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 DB29_02414 afe21f3df5c8d865167cea926378f534 628 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 19 36 - T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 DB29_02414 afe21f3df5c8d865167cea926378f534 628 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 476 596 3.5E-47 T 14-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 DB29_02414 afe21f3df5c8d865167cea926378f534 628 SUPERFAMILY SSF55604 6 79 3.53E-19 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 DB29_02414 afe21f3df5c8d865167cea926378f534 628 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 538 550 - T 14-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 DB29_03645 19462735a7b8ddd90dd5fcad41e84f75 148 Gene3D G3DSA:3.30.70.640 4 148 6.8E-31 T 14-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 DB29_03645 19462735a7b8ddd90dd5fcad41e84f75 148 Pfam PF01967 MoaC family 17 147 1.4E-28 T 14-10-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 DB29_03645 19462735a7b8ddd90dd5fcad41e84f75 148 SUPERFAMILY SSF55040 12 147 4.84E-29 T 14-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 DB29_03673 02bd4523eac6ee3df1ee7a036f5975c2 648 SUPERFAMILY SSF47384 269 329 6.67E-13 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DB29_03673 02bd4523eac6ee3df1ee7a036f5975c2 648 PRINTS PR00344 Bacterial sensor protein C-terminal signature 418 432 3.0E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB29_03673 02bd4523eac6ee3df1ee7a036f5975c2 648 PRINTS PR00344 Bacterial sensor protein C-terminal signature 500 513 3.0E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB29_03673 02bd4523eac6ee3df1ee7a036f5975c2 648 PRINTS PR00344 Bacterial sensor protein C-terminal signature 476 494 3.0E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB29_03673 02bd4523eac6ee3df1ee7a036f5975c2 648 PRINTS PR00344 Bacterial sensor protein C-terminal signature 460 470 3.0E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB29_03673 02bd4523eac6ee3df1ee7a036f5975c2 648 Pfam PF07194 P2 response regulator binding domain 159 235 1.0E-20 T 14-10-2018 IPR010808 Chemotaxis protein CheA, P2 response regulator-binding GO:0000155|GO:0000160|GO:0004673|GO:0006928 DB29_03673 02bd4523eac6ee3df1ee7a036f5975c2 648 SMART SM00260 508 646 5.1E-37 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 DB29_03673 02bd4523eac6ee3df1ee7a036f5975c2 648 SUPERFAMILY SSF47226 4 113 1.22E-31 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 DB29_03673 02bd4523eac6ee3df1ee7a036f5975c2 648 Gene3D G3DSA:3.30.565.10 329 515 9.7E-58 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB29_03673 02bd4523eac6ee3df1ee7a036f5975c2 648 SUPERFAMILY SSF55874 332 514 5.24E-40 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB29_03673 02bd4523eac6ee3df1ee7a036f5975c2 648 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 376 515 2.1E-17 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DB29_03673 02bd4523eac6ee3df1ee7a036f5975c2 648 SMART SM00073 3 100 7.9E-27 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 DB29_03673 02bd4523eac6ee3df1ee7a036f5975c2 648 Gene3D G3DSA:2.30.30.40 516 642 2.9E-37 T 14-10-2018 DB29_03673 02bd4523eac6ee3df1ee7a036f5975c2 648 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 269 326 1.7E-8 T 14-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 DB29_03673 02bd4523eac6ee3df1ee7a036f5975c2 648 SMART SM01231 268 328 1.4E-13 T 14-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 DB29_03673 02bd4523eac6ee3df1ee7a036f5975c2 648 SMART SM00387 373 516 2.2E-23 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DB29_03673 02bd4523eac6ee3df1ee7a036f5975c2 648 Gene3D G3DSA:2.40.50.180 539 601 2.9E-37 T 14-10-2018 DB29_03673 02bd4523eac6ee3df1ee7a036f5975c2 648 Gene3D G3DSA:3.30.70.1110 153 236 1.2E-18 T 14-10-2018 IPR037052 Chemotaxis protein CheA, P2 response regulator-binding domain superfamily DB29_03673 02bd4523eac6ee3df1ee7a036f5975c2 648 SUPERFAMILY SSF55052 153 235 2.25E-18 T 14-10-2018 IPR035891 CheY-binding domain of CheA DB29_03673 02bd4523eac6ee3df1ee7a036f5975c2 648 Gene3D G3DSA:1.10.287.560 268 328 8.0E-15 T 14-10-2018 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily GO:0000155|GO:0006935 DB29_03673 02bd4523eac6ee3df1ee7a036f5975c2 648 SUPERFAMILY SSF50341 515 643 8.76E-30 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 DB29_03673 02bd4523eac6ee3df1ee7a036f5975c2 648 Gene3D G3DSA:1.20.120.160 4 137 5.0E-37 T 14-10-2018 IPR036641 HPT domain superfamily GO:0000160 DB29_03673 02bd4523eac6ee3df1ee7a036f5975c2 648 Pfam PF01627 Hpt domain 6 98 4.4E-19 T 14-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 DB29_03673 02bd4523eac6ee3df1ee7a036f5975c2 648 Pfam PF01584 CheW-like domain 521 646 7.2E-24 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 DB29_03001 254a76e363892153f0962ba69e536f34 386 Gene3D G3DSA:3.30.360.10 136 352 3.0E-43 T 14-10-2018 DB29_03001 254a76e363892153f0962ba69e536f34 386 SUPERFAMILY SSF55347 132 269 5.23E-33 T 14-10-2018 DB29_03001 254a76e363892153f0962ba69e536f34 386 Gene3D G3DSA:3.40.50.720 1 135 1.0E-29 T 14-10-2018 DB29_03001 254a76e363892153f0962ba69e536f34 386 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 138 247 1.2E-11 T 14-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 DB29_03001 254a76e363892153f0962ba69e536f34 386 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 4 124 1.9E-20 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 DB29_03001 254a76e363892153f0962ba69e536f34 386 SUPERFAMILY SSF51735 3 154 1.08E-36 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_0P0039 bb5f1fd60a79e04c10dc6ac74c088b96 837 PIRSF PIRSF015040 1 834 7.6E-186 T 14-10-2018 IPR016628 ATPase, SAG2001, predicted DB29_0P0039 bb5f1fd60a79e04c10dc6ac74c088b96 837 SUPERFAMILY SSF52540 426 806 2.16E-32 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_0P0039 bb5f1fd60a79e04c10dc6ac74c088b96 837 Pfam PF12846 AAA-like domain 459 818 6.8E-115 T 14-10-2018 DB29_00690 741566f3eae8d398d468629b115d9c68 215 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 191 5.3E-49 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 DB29_00690 741566f3eae8d398d468629b115d9c68 215 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 5 14 - T 14-10-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824 DB29_00690 741566f3eae8d398d468629b115d9c68 215 PRINTS PR00991 6-phosphofructo-2-kinase family signature 84 100 2.8E-5 T 14-10-2018 IPR003094 Fructose-2,6-bisphosphatase GO:0003824|GO:0005524|GO:0006003 KEGG: 00051+2.7.1.105+3.1.3.46|Reactome: R-HSA-70171 DB29_00690 741566f3eae8d398d468629b115d9c68 215 PRINTS PR00991 6-phosphofructo-2-kinase family signature 3 25 2.8E-5 T 14-10-2018 IPR003094 Fructose-2,6-bisphosphatase GO:0003824|GO:0005524|GO:0006003 KEGG: 00051+2.7.1.105+3.1.3.46|Reactome: R-HSA-70171 DB29_00690 741566f3eae8d398d468629b115d9c68 215 SMART SM00855 2 154 2.1E-23 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 DB29_00690 741566f3eae8d398d468629b115d9c68 215 PIRSF PIRSF000709 1 163 2.7E-17 T 14-10-2018 DB29_00690 741566f3eae8d398d468629b115d9c68 215 Gene3D G3DSA:3.40.50.1240 1 208 5.8E-51 T 14-10-2018 IPR029033 Histidine phosphatase superfamily DB29_00690 741566f3eae8d398d468629b115d9c68 215 SUPERFAMILY SSF53254 1 203 3.53E-50 T 14-10-2018 IPR029033 Histidine phosphatase superfamily DB29_01649 e2b0b122eb0cd9d49f61d3e27add3642 262 Gene3D G3DSA:3.40.50.1000 85 183 2.2E-71 T 14-10-2018 IPR023214 HAD superfamily DB29_01649 e2b0b122eb0cd9d49f61d3e27add3642 262 SUPERFAMILY SSF56784 6 258 4.61E-56 T 14-10-2018 IPR036412 HAD-like superfamily DB29_01649 e2b0b122eb0cd9d49f61d3e27add3642 262 Pfam PF13242 HAD-hyrolase-like 182 258 4.2E-19 T 14-10-2018 DB29_01649 e2b0b122eb0cd9d49f61d3e27add3642 262 Pfam PF13344 Haloacid dehalogenase-like hydrolase 8 107 2.9E-21 T 14-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA DB29_01649 e2b0b122eb0cd9d49f61d3e27add3642 262 Gene3D G3DSA:3.40.50.1000 9 255 2.2E-71 T 14-10-2018 IPR023214 HAD superfamily DB29_01649 e2b0b122eb0cd9d49f61d3e27add3642 262 TIGRFAM TIGR01460 HAD-SF-IIA: HAD hydrolase, family IIA 8 232 1.5E-35 T 14-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA DB29_00260 650b6092a1964d2ef935f8f2032fb6c4 171 Gene3D G3DSA:3.90.1140.10 2 170 4.0E-36 T 14-10-2018 DB29_00260 650b6092a1964d2ef935f8f2032fb6c4 171 SUPERFAMILY SSF55144 2 169 9.07E-27 T 14-10-2018 IPR009097 Cyclic phosphodiesterase DB29_00260 650b6092a1964d2ef935f8f2032fb6c4 171 Hamap MF_01444 Putative phosphoesterase . 1 169 36.339 T 14-10-2018 IPR022932 Putative phosphoesterase YjcG DB29_00260 650b6092a1964d2ef935f8f2032fb6c4 171 Pfam PF13563 2'-5' RNA ligase superfamily 14 155 5.1E-19 T 14-10-2018 DB29_03969 09ed28054a6212dfa0ad39fe58ab7b10 681 Gene3D G3DSA:3.40.50.300 197 432 9.1E-85 T 14-10-2018 DB29_03969 09ed28054a6212dfa0ad39fe58ab7b10 681 Pfam PF17191 RecG wedge domain 8 160 2.0E-13 T 14-10-2018 IPR033454 RecG, wedge domain DB29_03969 09ed28054a6212dfa0ad39fe58ab7b10 681 SUPERFAMILY SSF52540 435 638 5.73E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_03969 09ed28054a6212dfa0ad39fe58ab7b10 681 Pfam PF00270 DEAD/DEAH box helicase 259 414 6.4E-18 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 DB29_03969 09ed28054a6212dfa0ad39fe58ab7b10 681 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 26 647 7.6E-243 T 14-10-2018 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 DB29_03969 09ed28054a6212dfa0ad39fe58ab7b10 681 Gene3D G3DSA:1.10.150.20 2 43 2.0E-5 T 14-10-2018 DB29_03969 09ed28054a6212dfa0ad39fe58ab7b10 681 Pfam PF00271 Helicase conserved C-terminal domain 451 571 2.0E-19 T 14-10-2018 IPR001650 Helicase, C-terminal DB29_03969 09ed28054a6212dfa0ad39fe58ab7b10 681 Gene3D G3DSA:3.40.50.300 440 612 2.2E-57 T 14-10-2018 DB29_03969 09ed28054a6212dfa0ad39fe58ab7b10 681 Gene3D G3DSA:2.40.50.140 46 136 3.0E-8 T 14-10-2018 DB29_03969 09ed28054a6212dfa0ad39fe58ab7b10 681 SMART SM00490 487 572 2.4E-20 T 14-10-2018 IPR001650 Helicase, C-terminal DB29_03969 09ed28054a6212dfa0ad39fe58ab7b10 681 SUPERFAMILY SSF52540 172 435 1.39E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_03969 09ed28054a6212dfa0ad39fe58ab7b10 681 SMART SM00487 252 442 3.1E-36 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DB29_03969 09ed28054a6212dfa0ad39fe58ab7b10 681 SUPERFAMILY SSF50249 6 166 1.68E-25 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DB29_03938 2b8d8cdb9f4d3f858f1d01cd26e8b145 427 SUPERFAMILY SSF51556 52 365 5.39E-111 T 14-10-2018 IPR032466 Metal-dependent hydrolase DB29_03938 2b8d8cdb9f4d3f858f1d01cd26e8b145 427 Gene3D G3DSA:2.30.40.10 8 417 2.0E-150 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DB29_03938 2b8d8cdb9f4d3f858f1d01cd26e8b145 427 Hamap MF_00220_B Dihydroorotase [pyrC]. 3 421 44.575 T 14-10-2018 IPR004722 Dihydroorotase GO:0004151|GO:0006221|GO:0046872 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DB29_03938 2b8d8cdb9f4d3f858f1d01cd26e8b145 427 SUPERFAMILY SSF51338 3 425 6.57E-25 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DB29_03938 2b8d8cdb9f4d3f858f1d01cd26e8b145 427 ProSitePatterns PS00483 Dihydroorotase signature 2. 300 311 - T 14-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DB29_03938 2b8d8cdb9f4d3f858f1d01cd26e8b145 427 ProSitePatterns PS00482 Dihydroorotase signature 1. 55 63 - T 14-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DB29_03938 2b8d8cdb9f4d3f858f1d01cd26e8b145 427 Pfam PF01979 Amidohydrolase family 49 418 8.1E-55 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 DB29_03938 2b8d8cdb9f4d3f858f1d01cd26e8b145 427 Gene3D G3DSA:3.20.20.140 52 364 2.0E-150 T 14-10-2018 DB29_03938 2b8d8cdb9f4d3f858f1d01cd26e8b145 427 TIGRFAM TIGR00857 pyrC_multi: dihydroorotase, multifunctional complex type 15 421 2.3E-145 T 14-10-2018 DB29_02826 5211c452f8f7d783c84baa1a85ae6590 116 Pfam PF08863 YolD-like protein 21 113 9.4E-26 T 14-10-2018 IPR014962 YolD-like protein DB29_02278 308d4a9ff4bfe7be958c2e4348fceb59 300 Pfam PF13732 Domain of unknown function (DUF4162) 212 294 7.7E-17 T 14-10-2018 IPR025302 Domain of unknown function DUF4162 DB29_02278 308d4a9ff4bfe7be958c2e4348fceb59 300 Pfam PF00005 ABC transporter 19 158 2.9E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB29_02278 308d4a9ff4bfe7be958c2e4348fceb59 300 SMART SM00382 27 213 6.1E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_02278 308d4a9ff4bfe7be958c2e4348fceb59 300 SUPERFAMILY SSF52540 3 223 1.3E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_02278 308d4a9ff4bfe7be958c2e4348fceb59 300 ProSitePatterns PS00211 ABC transporters family signature. 131 145 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB29_02278 308d4a9ff4bfe7be958c2e4348fceb59 300 Gene3D G3DSA:3.40.50.300 1 229 7.5E-60 T 14-10-2018 DB29_00054 242eff435917177e1b1ae3bce9822805 355 Gene3D G3DSA:1.10.101.10 123 198 6.4E-22 T 14-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 DB29_00054 242eff435917177e1b1ae3bce9822805 355 Pfam PF01471 Putative peptidoglycan binding domain 134 186 2.7E-16 T 14-10-2018 IPR002477 Peptidoglycan binding-like DB29_00054 242eff435917177e1b1ae3bce9822805 355 Pfam PF01471 Putative peptidoglycan binding domain 66 122 4.8E-14 T 14-10-2018 IPR002477 Peptidoglycan binding-like DB29_00054 242eff435917177e1b1ae3bce9822805 355 Pfam PF06725 3D domain 294 354 6.3E-20 T 14-10-2018 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 DB29_00054 242eff435917177e1b1ae3bce9822805 355 SUPERFAMILY SSF50685 295 343 4.88E-8 T 14-10-2018 IPR036908 RlpA-like domain superfamily DB29_00054 242eff435917177e1b1ae3bce9822805 355 Gene3D G3DSA:1.10.101.10 58 122 1.2E-13 T 14-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 DB29_00054 242eff435917177e1b1ae3bce9822805 355 SUPERFAMILY SSF47090 121 193 2.54E-19 T 14-10-2018 IPR036365 PGBD-like superfamily DB29_00054 242eff435917177e1b1ae3bce9822805 355 SUPERFAMILY SSF47090 58 122 1.46E-12 T 14-10-2018 IPR036365 PGBD-like superfamily DB29_01255 a439ff83408a9d2481f8d811a06b5434 335 Gene3D G3DSA:3.40.50.720 128 273 1.2E-106 T 14-10-2018 DB29_01255 a439ff83408a9d2481f8d811a06b5434 335 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 32 93 1.4E-5 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 DB29_01255 a439ff83408a9d2481f8d811a06b5434 335 SMART SM00829 13 332 2.1E-11 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 DB29_01255 a439ff83408a9d2481f8d811a06b5434 335 SUPERFAMILY SSF50129 7 146 2.59E-30 T 14-10-2018 IPR011032 GroES-like superfamily DB29_01255 a439ff83408a9d2481f8d811a06b5434 335 Gene3D G3DSA:3.90.180.10 25 331 1.2E-106 T 14-10-2018 DB29_01255 a439ff83408a9d2481f8d811a06b5434 335 Pfam PF00107 Zinc-binding dehydrogenase 159 259 3.4E-15 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 DB29_01255 a439ff83408a9d2481f8d811a06b5434 335 SUPERFAMILY SSF51735 117 286 2.93E-37 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_01255 a439ff83408a9d2481f8d811a06b5434 335 TIGRFAM TIGR02817 adh_fam_1: zinc-binding alcohol dehydrogenase family protein 2 332 3.0E-132 T 14-10-2018 IPR014182 Alcohol dehydrogenase, zinc-binding type 1 GO:0008270 DB29_04158 a3a04ab85367bf693b068cf1baf5887a 221 PIRSF PIRSF006293 2 219 8.9E-77 T 14-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 DB29_04158 a3a04ab85367bf693b068cf1baf5887a 221 Pfam PF06508 Queuosine biosynthesis protein QueC 5 210 2.0E-81 T 14-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 DB29_04158 a3a04ab85367bf693b068cf1baf5887a 221 SUPERFAMILY SSF52402 4 212 6.62E-66 T 14-10-2018 DB29_04158 a3a04ab85367bf693b068cf1baf5887a 221 Gene3D G3DSA:3.40.50.620 3 218 2.8E-73 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DB29_04158 a3a04ab85367bf693b068cf1baf5887a 221 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 4 218 47.706 T 14-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 DB29_04158 a3a04ab85367bf693b068cf1baf5887a 221 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 6 205 3.5E-78 T 14-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 DB29_01120 567bf0217df257ff880c24702d8754fd 240 Pfam PF02517 CAAX protease self-immunity 123 209 1.7E-16 T 14-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 DB29_00352 3f5c79c97a7cd286e980047ef8cc208d 607 Pfam PF03144 Elongation factor Tu domain 2 214 284 1.2E-11 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 DB29_00352 3f5c79c97a7cd286e980047ef8cc208d 607 TIGRFAM TIGR01393 lepA: elongation factor 4 12 605 0.0 T 14-10-2018 IPR006297 Elongation factor 4 GO:0005525 DB29_00352 3f5c79c97a7cd286e980047ef8cc208d 607 Pfam PF00679 Elongation factor G C-terminus 408 495 4.3E-26 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like DB29_00352 3f5c79c97a7cd286e980047ef8cc208d 607 SUPERFAMILY SSF54980 408 503 5.76E-28 T 14-10-2018 IPR035647 EF-G domain III/V-like DB29_00352 3f5c79c97a7cd286e980047ef8cc208d 607 SUPERFAMILY SSF50447 174 297 2.33E-32 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily DB29_00352 3f5c79c97a7cd286e980047ef8cc208d 607 Pfam PF00009 Elongation factor Tu GTP binding domain 12 190 2.2E-52 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DB29_00352 3f5c79c97a7cd286e980047ef8cc208d 607 Gene3D G3DSA:3.30.70.3380 377 488 2.2E-44 T 14-10-2018 DB29_00352 3f5c79c97a7cd286e980047ef8cc208d 607 SUPERFAMILY SSF52540 9 214 9.62E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_00352 3f5c79c97a7cd286e980047ef8cc208d 607 Pfam PF06421 GTP-binding protein LepA C-terminus 497 603 2.8E-52 T 14-10-2018 IPR013842 GTP-binding protein LepA, C-terminal DB29_00352 3f5c79c97a7cd286e980047ef8cc208d 607 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 14 184 1.9E-18 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 DB29_00352 3f5c79c97a7cd286e980047ef8cc208d 607 Gene3D G3DSA:3.30.70.870 295 376 3.5E-37 T 14-10-2018 DB29_00352 3f5c79c97a7cd286e980047ef8cc208d 607 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site DB29_00352 3f5c79c97a7cd286e980047ef8cc208d 607 PRINTS PR00315 GTP-binding elongation factor signature 15 28 1.2E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DB29_00352 3f5c79c97a7cd286e980047ef8cc208d 607 PRINTS PR00315 GTP-binding elongation factor signature 99 110 1.2E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DB29_00352 3f5c79c97a7cd286e980047ef8cc208d 607 PRINTS PR00315 GTP-binding elongation factor signature 135 144 1.2E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DB29_00352 3f5c79c97a7cd286e980047ef8cc208d 607 PRINTS PR00315 GTP-binding elongation factor signature 83 93 1.2E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DB29_00352 3f5c79c97a7cd286e980047ef8cc208d 607 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.2E-13 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DB29_00352 3f5c79c97a7cd286e980047ef8cc208d 607 Gene3D G3DSA:3.40.50.300 9 194 3.0E-73 T 14-10-2018 DB29_00352 3f5c79c97a7cd286e980047ef8cc208d 607 Hamap MF_00071 Elongation factor 4 [lepA]. 1 607 314.768 T 14-10-2018 IPR006297 Elongation factor 4 GO:0005525 DB29_00352 3f5c79c97a7cd286e980047ef8cc208d 607 SMART SM00838 410 495 4.7E-5 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like DB29_00352 3f5c79c97a7cd286e980047ef8cc208d 607 SUPERFAMILY SSF54980 301 379 2.66E-19 T 14-10-2018 IPR035647 EF-G domain III/V-like DB29_00352 3f5c79c97a7cd286e980047ef8cc208d 607 Gene3D G3DSA:3.30.70.2570 489 563 2.9E-35 T 14-10-2018 IPR038363 LepA, C-terminal domain superfamily DB29_00352 3f5c79c97a7cd286e980047ef8cc208d 607 Gene3D G3DSA:2.40.30.10 195 294 1.9E-36 T 14-10-2018 DB29_02129 cdcb5339a30ae7d5a5c8a3e36ea3f961 179 Pfam PF08281 Sigma-70, region 4 114 164 3.4E-12 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DB29_02129 cdcb5339a30ae7d5a5c8a3e36ea3f961 179 Gene3D G3DSA:1.10.10.10 114 170 5.7E-13 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_02129 cdcb5339a30ae7d5a5c8a3e36ea3f961 179 Gene3D G3DSA:1.10.1740.10 1 113 2.3E-22 T 14-10-2018 DB29_02129 cdcb5339a30ae7d5a5c8a3e36ea3f961 179 TIGRFAM TIGR02954 Sig70_famx3: RNA polymerase sigma-70 factor, TIGR02954 family 1 170 4.9E-73 T 14-10-2018 IPR014300 RNA polymerase sigma-V type DB29_02129 cdcb5339a30ae7d5a5c8a3e36ea3f961 179 SUPERFAMILY SSF88659 111 170 2.24E-13 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like DB29_02129 cdcb5339a30ae7d5a5c8a3e36ea3f961 179 Pfam PF04542 Sigma-70 region 2 21 88 8.4E-10 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 DB29_02129 cdcb5339a30ae7d5a5c8a3e36ea3f961 179 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 17 166 4.4E-25 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 DB29_02129 cdcb5339a30ae7d5a5c8a3e36ea3f961 179 SUPERFAMILY SSF88946 1 96 1.0E-21 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 DB29_04052 5673ac221e45005b8ddddc1dffa1f6d5 302 SUPERFAMILY SSF55120 3 237 5.76E-80 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 DB29_04052 5673ac221e45005b8ddddc1dffa1f6d5 302 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 25 179 1.1E-57 T 14-10-2018 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 DB29_04052 5673ac221e45005b8ddddc1dffa1f6d5 302 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 4 216 1.8E-77 T 14-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 DB29_04052 5673ac221e45005b8ddddc1dffa1f6d5 302 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 180 237 3.7E-12 T 14-10-2018 IPR032819 tRNA pseudouridylate synthase B, C-terminal Reactome: R-HSA-171319|Reactome: R-HSA-6790901 DB29_04052 5673ac221e45005b8ddddc1dffa1f6d5 302 Gene3D G3DSA:3.30.2350.10 1 245 6.6E-90 T 14-10-2018 DB29_04052 5673ac221e45005b8ddddc1dffa1f6d5 302 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 3 299 18.761 T 14-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 DB29_01624 e2bf372f5ef4e033512404fb49094d36 326 Pfam PF00294 pfkB family carbohydrate kinase 12 313 6.0E-65 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB DB29_01624 e2bf372f5ef4e033512404fb49094d36 326 TIGRFAM TIGR04382 myo_inos_iolC_N: 5-dehydro-2-deoxygluconokinase 10 320 2.5E-117 T 14-10-2018 IPR030830 5-Dehydro-2-deoxygluconokinase KEGG: 00562+2.7.1.92 DB29_01624 e2bf372f5ef4e033512404fb49094d36 326 Hamap MF_01668 5-dehydro-2-deoxygluconokinase [iolC]. 7 325 51.767 T 14-10-2018 IPR022841 5-dehydro-2-deoxygluconokinase, Firmicutes GO:0016310|GO:0047590 KEGG: 00562+2.7.1.92 DB29_01624 e2bf372f5ef4e033512404fb49094d36 326 Gene3D G3DSA:2.20.150.10 19 115 3.3E-101 T 14-10-2018 IPR023314 5-Dehydro-2-deoxygluconokinase-like superfamily KEGG: 00562+2.7.1.92 DB29_01624 e2bf372f5ef4e033512404fb49094d36 326 Gene3D G3DSA:3.40.1190.20 14 300 3.3E-101 T 14-10-2018 IPR029056 Ribokinase-like DB29_01624 e2bf372f5ef4e033512404fb49094d36 326 SUPERFAMILY SSF53613 10 321 4.21E-75 T 14-10-2018 IPR029056 Ribokinase-like DB29_01624 e2bf372f5ef4e033512404fb49094d36 326 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 265 278 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 DB29_01482 52cf6f572be99566f668541ccddbb79b 475 Pfam PF17042 Putative nucleotide-binding of sugar-metabolising enzyme 302 466 3.7E-36 T 14-10-2018 IPR031475 Four-carbon acid sugar kinase, C-terminal domain DB29_01482 52cf6f572be99566f668541ccddbb79b 475 Gene3D G3DSA:3.40.980.20 291 475 1.7E-13 T 14-10-2018 DB29_01482 52cf6f572be99566f668541ccddbb79b 475 Pfam PF07005 Putative sugar-binding N-terminal domain 37 278 6.1E-54 T 14-10-2018 IPR010737 Four-carbon acid sugar kinase, N-terminal domain DB29_01482 52cf6f572be99566f668541ccddbb79b 475 Gene3D G3DSA:3.40.50.10840 45 280 1.1E-12 T 14-10-2018 IPR037051 Four-carbon acid sugar kinase, N-terminal domain superfamily DB29_01482 52cf6f572be99566f668541ccddbb79b 475 SUPERFAMILY SSF142764 37 473 2.09E-66 T 14-10-2018 DB29_03448 a74f40e6730bb2eb3f60f4f80ce78a88 380 Pfam PF01098 Cell cycle protein 12 365 1.4E-107 T 14-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DB29_03448 a74f40e6730bb2eb3f60f4f80ce78a88 380 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 323 347 - T 14-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DB29_03448 a74f40e6730bb2eb3f60f4f80ce78a88 380 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 10 364 1.4E-113 T 14-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DB29_00860 5bb16c066600e5ea320b267902af8876 767 Gene3D G3DSA:2.60.40.1180 614 661 6.2E-17 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta DB29_00860 5bb16c066600e5ea320b267902af8876 767 Gene3D G3DSA:2.60.40.1760 1 241 5.2E-74 T 14-10-2018 DB29_00860 5bb16c066600e5ea320b267902af8876 767 SUPERFAMILY SSF74650 1 243 7.22E-66 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 DB29_00860 5bb16c066600e5ea320b267902af8876 767 Gene3D G3DSA:2.60.40.1180 662 766 7.5E-21 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta DB29_00860 5bb16c066600e5ea320b267902af8876 767 SUPERFAMILY SSF51445 261 601 1.49E-91 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily DB29_00860 5bb16c066600e5ea320b267902af8876 767 Pfam PF01055 Glycosyl hydrolases family 31 237 666 3.4E-120 T 14-10-2018 IPR000322 Glycoside hydrolase family 31 GO:0004553|GO:0005975 DB29_00860 5bb16c066600e5ea320b267902af8876 767 Pfam PF13802 Galactose mutarotase-like 156 215 9.6E-18 T 14-10-2018 IPR025887 Glycoside hydrolase family 31, N-terminal domain DB29_00860 5bb16c066600e5ea320b267902af8876 767 Gene3D G3DSA:3.20.20.80 243 613 4.6E-147 T 14-10-2018 DB29_00860 5bb16c066600e5ea320b267902af8876 767 SUPERFAMILY SSF51011 583 662 3.02E-20 T 14-10-2018 DB29_00860 5bb16c066600e5ea320b267902af8876 767 SUPERFAMILY SSF117125 663 759 1.26E-26 T 14-10-2018 DB29_03567 73c05a86f9b59706ef2539dae7de0e39 355 Pfam PF05343 M42 glutamyl aminopeptidase 45 336 5.6E-115 T 14-10-2018 IPR008007 Peptidase M42 DB29_03567 73c05a86f9b59706ef2539dae7de0e39 355 SUPERFAMILY SSF101821 70 179 3.21E-33 T 14-10-2018 DB29_03567 73c05a86f9b59706ef2539dae7de0e39 355 Gene3D G3DSA:2.40.30.40 74 161 1.9E-131 T 14-10-2018 IPR023367 Peptidase M42, domain 2 DB29_03567 73c05a86f9b59706ef2539dae7de0e39 355 Gene3D G3DSA:3.40.630.10 9 339 1.9E-131 T 14-10-2018 DB29_03567 73c05a86f9b59706ef2539dae7de0e39 355 PIRSF PIRSF001123 1 355 7.3E-145 T 14-10-2018 IPR008007 Peptidase M42 DB29_03567 73c05a86f9b59706ef2539dae7de0e39 355 SUPERFAMILY SSF53187 4 350 3.87E-70 T 14-10-2018 DB29_01851 9c4036084a18b9af1f42220508b5f974 160 PIRSF PIRSF029886 1 152 1.0E-52 T 14-10-2018 IPR024164 KinB-signalling pathway activation protein GO:0045881 DB29_01851 9c4036084a18b9af1f42220508b5f974 160 Pfam PF14089 KinB-signalling pathway activation in sporulation 17 136 1.0E-31 T 14-10-2018 IPR024164 KinB-signalling pathway activation protein GO:0045881 DB29_01851 9c4036084a18b9af1f42220508b5f974 160 SMART SM01251 17 147 3.4E-25 T 14-10-2018 IPR024164 KinB-signalling pathway activation protein GO:0045881 DB29_0P0031 a93f044bb555b9ded5bd8a4640613fc0 883 Pfam PF01935 Domain of unknown function DUF87 327 579 1.6E-8 T 14-10-2018 IPR002789 Helicase HerA, central domain DB29_0P0031 a93f044bb555b9ded5bd8a4640613fc0 883 Gene3D G3DSA:3.40.50.300 312 450 2.6E-7 T 14-10-2018 DB29_0P0031 a93f044bb555b9ded5bd8a4640613fc0 883 Gene3D G3DSA:3.40.50.300 539 711 4.4E-13 T 14-10-2018 DB29_0P0031 a93f044bb555b9ded5bd8a4640613fc0 883 SUPERFAMILY SSF52540 314 687 1.75E-25 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_02604 21d639e7c4985fb3c604e655a6065d6b 494 SUPERFAMILY SSF56801 6 491 4.58E-145 T 14-10-2018 DB29_02604 21d639e7c4985fb3c604e655a6065d6b 494 ProSitePatterns PS00455 Putative AMP-binding domain signature. 150 161 - T 14-10-2018 IPR020845 AMP-binding, conserved site DB29_02604 21d639e7c4985fb3c604e655a6065d6b 494 Pfam PF13193 AMP-binding enzyme C-terminal domain 403 479 1.8E-21 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain DB29_02604 21d639e7c4985fb3c604e655a6065d6b 494 Pfam PF00501 AMP-binding enzyme 14 394 2.4E-93 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 DB29_02604 21d639e7c4985fb3c604e655a6065d6b 494 Gene3D G3DSA:3.40.50.12780 1 387 1.7E-108 T 14-10-2018 DB29_02604 21d639e7c4985fb3c604e655a6065d6b 494 Gene3D G3DSA:3.30.300.310 390 493 1.7E-33 T 14-10-2018 DB29_00574 2181b29998b5f4c759fbcb9fec719d0d 252 Pfam PF12679 ABC-2 family transporter protein 4 251 2.0E-17 T 14-10-2018 IPR032688 ABC-2 family transporter protein GO:0055085 DB29_00401 de49a1d958a839b9117b620851df8a66 940 Gene3D G3DSA:2.60.40.10 751 843 2.0E-26 T 14-10-2018 IPR013783 Immunoglobulin-like fold DB29_00401 de49a1d958a839b9117b620851df8a66 940 SMART SM01066 848 926 5.2E-30 T 14-10-2018 IPR005085 Carbohydrate binding module family 25 GO:2001070 DB29_00401 de49a1d958a839b9117b620851df8a66 940 Pfam PF16738 Starch-binding module 26 758 823 1.1E-17 T 14-10-2018 IPR031965 Starch-binding module 26 KEGG: 00500+3.2.1.1 DB29_00401 de49a1d958a839b9117b620851df8a66 940 SUPERFAMILY SSF51445 25 498 3.52E-66 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily DB29_00401 de49a1d958a839b9117b620851df8a66 940 Pfam PF00128 Alpha amylase, catalytic domain 71 210 5.8E-25 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 DB29_00401 de49a1d958a839b9117b620851df8a66 940 Pfam PF00128 Alpha amylase, catalytic domain 290 421 1.3E-5 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 DB29_00401 de49a1d958a839b9117b620851df8a66 940 Pfam PF03423 Carbohydrate binding domain (family 25) 848 934 5.7E-23 T 14-10-2018 IPR005085 Carbohydrate binding module family 25 GO:2001070 DB29_00401 de49a1d958a839b9117b620851df8a66 940 Gene3D G3DSA:3.20.20.80 252 494 1.5E-31 T 14-10-2018 DB29_00401 de49a1d958a839b9117b620851df8a66 940 Gene3D G3DSA:3.20.20.80 18 249 1.1E-50 T 14-10-2018 DB29_00401 de49a1d958a839b9117b620851df8a66 940 SMART SM00642 36 490 3.6E-70 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 DB29_00401 de49a1d958a839b9117b620851df8a66 940 Gene3D G3DSA:2.60.40.10 844 940 1.5E-34 T 14-10-2018 IPR013783 Immunoglobulin-like fold DB29_00387 16d8d8527baf61d139fcd8f1a19e96fc 107 SUPERFAMILY SSF50022 9 106 6.15E-30 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 DB29_00387 16d8d8527baf61d139fcd8f1a19e96fc 107 TIGRFAM TIGR02378 nirD_assim_sml: nitrite reductase [NAD(P)H], small subunit 9 105 2.3E-23 T 14-10-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 DB29_00387 16d8d8527baf61d139fcd8f1a19e96fc 107 Pfam PF00355 Rieske [2Fe-2S] domain 11 88 1.1E-13 T 14-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 DB29_00387 16d8d8527baf61d139fcd8f1a19e96fc 107 Gene3D G3DSA:2.102.10.10 10 107 4.2E-27 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 DB29_01882 2e1e65162af80d44d0798ca985981297 436 Gene3D G3DSA:1.10.3370.10 1 431 5.0E-160 T 14-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 DB29_01882 2e1e65162af80d44d0798ca985981297 436 SUPERFAMILY SSF103491 1 426 5.49E-128 T 14-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 DB29_01882 2e1e65162af80d44d0798ca985981297 436 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 15 431 1.8E-140 T 14-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 DB29_01882 2e1e65162af80d44d0798ca985981297 436 PRINTS PR00303 Preprotein translocase SecY subunit signature 18 36 2.1E-98 T 14-10-2018 DB29_01882 2e1e65162af80d44d0798ca985981297 436 PRINTS PR00303 Preprotein translocase SecY subunit signature 273 292 2.1E-98 T 14-10-2018 DB29_01882 2e1e65162af80d44d0798ca985981297 436 PRINTS PR00303 Preprotein translocase SecY subunit signature 315 337 2.1E-98 T 14-10-2018 DB29_01882 2e1e65162af80d44d0798ca985981297 436 PRINTS PR00303 Preprotein translocase SecY subunit signature 150 175 2.1E-98 T 14-10-2018 DB29_01882 2e1e65162af80d44d0798ca985981297 436 PRINTS PR00303 Preprotein translocase SecY subunit signature 404 422 2.1E-98 T 14-10-2018 DB29_01882 2e1e65162af80d44d0798ca985981297 436 PRINTS PR00303 Preprotein translocase SecY subunit signature 110 133 2.1E-98 T 14-10-2018 DB29_01882 2e1e65162af80d44d0798ca985981297 436 PRINTS PR00303 Preprotein translocase SecY subunit signature 176 199 2.1E-98 T 14-10-2018 DB29_01882 2e1e65162af80d44d0798ca985981297 436 PRINTS PR00303 Preprotein translocase SecY subunit signature 370 388 2.1E-98 T 14-10-2018 DB29_01882 2e1e65162af80d44d0798ca985981297 436 PRINTS PR00303 Preprotein translocase SecY subunit signature 68 88 2.1E-98 T 14-10-2018 DB29_01882 2e1e65162af80d44d0798ca985981297 436 ProSitePatterns PS00756 Protein secY signature 2. 169 186 - T 14-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 DB29_01882 2e1e65162af80d44d0798ca985981297 436 ProSitePatterns PS00755 Protein secY signature 1. 69 88 - T 14-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 DB29_01882 2e1e65162af80d44d0798ca985981297 436 Pfam PF00344 SecY translocase 69 419 5.3E-113 T 14-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 DB29_01882 2e1e65162af80d44d0798ca985981297 436 Hamap MF_01465 Protein translocase subunit SecY [secY]. 5 435 29.39 T 14-10-2018 IPR026593 Protein translocase subunit SecY DB29_01882 2e1e65162af80d44d0798ca985981297 436 PIRSF PIRSF004557 1 436 7.1E-130 T 14-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 DB29_02059 62140ec7497a791a5b68ef44b71fda31 451 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 8 449 4.1E-185 T 14-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 DB29_02059 62140ec7497a791a5b68ef44b71fda31 451 Gene3D G3DSA:3.40.50.300 101 279 7.9E-54 T 14-10-2018 DB29_02059 62140ec7497a791a5b68ef44b71fda31 451 Pfam PF00308 Bacterial dnaA protein 115 331 6.6E-107 T 14-10-2018 IPR013317 Chromosomal replication initiator protein DnaA DB29_02059 62140ec7497a791a5b68ef44b71fda31 451 SMART SM00760 359 428 6.3E-42 T 14-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 DB29_02059 62140ec7497a791a5b68ef44b71fda31 451 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 409 428 1.1E-53 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like DB29_02059 62140ec7497a791a5b68ef44b71fda31 451 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 180 194 1.1E-53 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like DB29_02059 62140ec7497a791a5b68ef44b71fda31 451 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 148 168 1.1E-53 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like DB29_02059 62140ec7497a791a5b68ef44b71fda31 451 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 246 273 1.1E-53 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like DB29_02059 62140ec7497a791a5b68ef44b71fda31 451 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 212 226 1.1E-53 T 14-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like DB29_02059 62140ec7497a791a5b68ef44b71fda31 451 SMART SM00382 147 275 1.1E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_02059 62140ec7497a791a5b68ef44b71fda31 451 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 361 428 1.5E-30 T 14-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 DB29_02059 62140ec7497a791a5b68ef44b71fda31 451 SUPERFAMILY SSF48295 346 450 1.88E-36 T 14-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 DB29_02059 62140ec7497a791a5b68ef44b71fda31 451 SUPERFAMILY SSF52540 116 327 9.67E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_02059 62140ec7497a791a5b68ef44b71fda31 451 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 5 450 35.138 T 14-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 DB29_02059 62140ec7497a791a5b68ef44b71fda31 451 Gene3D G3DSA:3.30.300.180 1 83 3.8E-26 T 14-10-2018 IPR038454 DnaA, N-terminal domain superfamily DB29_02059 62140ec7497a791a5b68ef44b71fda31 451 Gene3D G3DSA:1.10.8.60 281 350 2.9E-29 T 14-10-2018 DB29_02059 62140ec7497a791a5b68ef44b71fda31 451 ProSitePatterns PS01008 DnaA protein signature. 409 428 - T 14-10-2018 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 DB29_02059 62140ec7497a791a5b68ef44b71fda31 451 Pfam PF11638 DnaA N-terminal domain 6 62 1.3E-18 T 14-10-2018 IPR024633 DnaA N-terminal domain DB29_02059 62140ec7497a791a5b68ef44b71fda31 451 Gene3D G3DSA:1.10.1750.10 351 451 1.4E-35 T 14-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 DB29_02979 2bbc7d2f769cd003da8e535f6cf44fa2 272 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 82 264 3.3E-18 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DB29_02979 2bbc7d2f769cd003da8e535f6cf44fa2 272 SUPERFAMILY SSF161098 2 271 8.29E-71 T 14-10-2018 IPR035906 MetI-like superfamily DB29_02979 2bbc7d2f769cd003da8e535f6cf44fa2 272 Gene3D G3DSA:1.10.3720.10 2 259 7.0E-61 T 14-10-2018 IPR035906 MetI-like superfamily DB29_03232 161962c6f09fa268f70a4b0b741cba3f 457 Pfam PF01551 Peptidase family M23 347 452 2.6E-27 T 14-10-2018 IPR016047 Peptidase M23 DB29_03232 161962c6f09fa268f70a4b0b741cba3f 457 Gene3D G3DSA:1.20.5.340 30 137 1.7E-7 T 14-10-2018 DB29_03232 161962c6f09fa268f70a4b0b741cba3f 457 SUPERFAMILY SSF51261 268 457 6.8E-45 T 14-10-2018 IPR011055 Duplicated hybrid motif DB29_03232 161962c6f09fa268f70a4b0b741cba3f 457 Gene3D G3DSA:2.70.70.10 234 457 6.3E-42 T 14-10-2018 IPR011055 Duplicated hybrid motif DB29_03232 161962c6f09fa268f70a4b0b741cba3f 457 SUPERFAMILY SSF57997 37 114 1.61E-6 T 14-10-2018 DB29_01474 e854d7ccb359fc4fbbf44dcd80c16078 670 PIRSF PIRSF029900 62 670 8.1E-272 T 14-10-2018 IPR011395 Alpha glucuronidase GO:0005576|GO:0045493|GO:0046559 DB29_01474 e854d7ccb359fc4fbbf44dcd80c16078 670 Gene3D G3DSA:3.20.20.80 132 464 4.7E-157 T 14-10-2018 DB29_01474 e854d7ccb359fc4fbbf44dcd80c16078 670 Pfam PF07488 Glycosyl hydrolase family 67 middle domain 117 443 9.2E-148 T 14-10-2018 IPR011100 Glycosyl hydrolase family 67, catalytic domain GO:0005576|GO:0045493|GO:0046559 DB29_01474 e854d7ccb359fc4fbbf44dcd80c16078 670 Gene3D G3DSA:3.30.379.10 22 131 4.5E-7 T 14-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 DB29_01474 e854d7ccb359fc4fbbf44dcd80c16078 670 Gene3D G3DSA:3.90.1330.10 466 670 1.6E-81 T 14-10-2018 IPR037054 Alpha-glucuronidase, C-terminal domain superfamily GO:0005576|GO:0045493|GO:0046559 DB29_01474 e854d7ccb359fc4fbbf44dcd80c16078 670 Pfam PF07477 Glycosyl hydrolase family 67 C-terminus 444 666 1.1E-92 T 14-10-2018 IPR011099 Glycosyl hydrolase family 67, C-terminal GO:0005576|GO:0045493|GO:0046559 DB29_01474 e854d7ccb359fc4fbbf44dcd80c16078 670 SUPERFAMILY SSF55545 20 132 3.79E-15 T 14-10-2018 IPR029018 Beta-hexosaminidase-like, domain 2 DB29_01474 e854d7ccb359fc4fbbf44dcd80c16078 670 SUPERFAMILY SSF51445 134 669 1.16E-232 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily DB29_03926 3a080cad761288324c9810bf37736f97 229 Gene3D G3DSA:3.20.20.10 2 229 6.3E-78 T 14-10-2018 IPR029066 PLP-binding barrel DB29_03926 3a080cad761288324c9810bf37736f97 229 SUPERFAMILY SSF51419 4 225 8.51E-68 T 14-10-2018 IPR029066 PLP-binding barrel DB29_03926 3a080cad761288324c9810bf37736f97 229 PIRSF PIRSF004848 2 229 3.9E-65 T 14-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 DB29_03926 3a080cad761288324c9810bf37736f97 229 Pfam PF01168 Alanine racemase, N-terminal domain 11 225 1.1E-21 T 14-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DB29_03926 3a080cad761288324c9810bf37736f97 229 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 5 225 1.8E-48 T 14-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 DB29_03926 3a080cad761288324c9810bf37736f97 229 Hamap MF_02087 Pyridoxal phosphate homeostasis protein. 7 226 27.643 T 14-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 DB29_01894 d491c5a5aafa407ece80d3e9520ad9b8 67 SUPERFAMILY SSF46561 1 64 3.27E-24 T 14-10-2018 IPR036049 Ribosomal protein L29/L35 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB29_01894 d491c5a5aafa407ece80d3e9520ad9b8 67 Pfam PF00831 Ribosomal L29 protein 5 60 6.9E-26 T 14-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB29_01894 d491c5a5aafa407ece80d3e9520ad9b8 67 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 18.098 T 14-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB29_01894 d491c5a5aafa407ece80d3e9520ad9b8 67 Gene3D G3DSA:1.10.287.310 1 66 5.9E-30 T 14-10-2018 DB29_01894 d491c5a5aafa407ece80d3e9520ad9b8 67 ProSitePatterns PS00579 Ribosomal protein L29 signature. 39 53 - T 14-10-2018 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB29_01894 d491c5a5aafa407ece80d3e9520ad9b8 67 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 60 2.9E-23 T 14-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB29_00306 b6de84ed1a731567dc4c593a68a11200 453 Pfam PF00270 DEAD/DEAH box helicase 28 194 1.2E-44 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 DB29_00306 b6de84ed1a731567dc4c593a68a11200 453 SUPERFAMILY SSF52540 72 354 4.88E-63 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_00306 b6de84ed1a731567dc4c593a68a11200 453 Pfam PF00271 Helicase conserved C-terminal domain 232 340 1.4E-24 T 14-10-2018 IPR001650 Helicase, C-terminal DB29_00306 b6de84ed1a731567dc4c593a68a11200 453 SMART SM00490 259 340 1.6E-25 T 14-10-2018 IPR001650 Helicase, C-terminal DB29_00306 b6de84ed1a731567dc4c593a68a11200 453 Gene3D G3DSA:3.40.50.300 216 451 5.4E-40 T 14-10-2018 DB29_00306 b6de84ed1a731567dc4c593a68a11200 453 Gene3D G3DSA:3.40.50.300 4 212 2.4E-68 T 14-10-2018 DB29_00306 b6de84ed1a731567dc4c593a68a11200 453 SMART SM00487 23 223 8.1E-53 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DB29_00699 894e757fdf96148cc7b8bacf231a7e39 586 Pfam PF01432 Peptidase family M3 193 574 7.9E-28 T 14-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 DB29_00699 894e757fdf96148cc7b8bacf231a7e39 586 Gene3D G3DSA:1.10.1370.30 18 586 5.0E-127 T 14-10-2018 DB29_00699 894e757fdf96148cc7b8bacf231a7e39 586 Pfam PF08439 Oligopeptidase F 108 171 6.8E-10 T 14-10-2018 IPR013647 Oligopeptidase F, N-terminal domain DB29_00699 894e757fdf96148cc7b8bacf231a7e39 586 SUPERFAMILY SSF55486 4 573 2.93E-102 T 14-10-2018 DB29_00699 894e757fdf96148cc7b8bacf231a7e39 586 TIGRFAM TIGR02290 M3_fam_3: oligoendopeptidase, pepF/M3 family 6 584 4.7E-195 T 14-10-2018 IPR011977 Peptidase M3B, oligoendopeptidase-related clade 3 DB29_04065 9908863efbe5717221296576eabd5039 555 ProSitePatterns PS01292 Uncharacterized protein family UPF0036 signature. 364 392 - T 14-10-2018 IPR001587 Ribonuclease J, conserved site DB29_04065 9908863efbe5717221296576eabd5039 555 Gene3D G3DSA:3.60.15.10 12 442 2.9E-184 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DB29_04065 9908863efbe5717221296576eabd5039 555 Gene3D G3DSA:3.40.50.10710 208 358 2.9E-184 T 14-10-2018 DB29_04065 9908863efbe5717221296576eabd5039 555 SMART SM00849 21 216 4.3E-27 T 14-10-2018 IPR001279 Metallo-beta-lactamase DB29_04065 9908863efbe5717221296576eabd5039 555 SUPERFAMILY SSF56281 10 424 3.62E-96 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DB29_04065 9908863efbe5717221296576eabd5039 555 Hamap MF_01491 Ribonuclease J [rnj]. 4 555 47.338 T 14-10-2018 IPR030854 Ribonuclease J, bacteria GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0090501 DB29_04065 9908863efbe5717221296576eabd5039 555 TIGRFAM TIGR00649 MG423: beta-CASP ribonuclease, RNase J family 9 553 8.0E-207 T 14-10-2018 IPR004613 Ribonuclease J GO:0003723|GO:0046872 DB29_04065 9908863efbe5717221296576eabd5039 555 Gene3D G3DSA:3.10.20.580 449 555 1.8E-39 T 14-10-2018 DB29_04065 9908863efbe5717221296576eabd5039 555 PIRSF PIRSF004803 1 555 3.9E-242 T 14-10-2018 IPR030854 Ribonuclease J, bacteria GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0090501 DB29_04065 9908863efbe5717221296576eabd5039 555 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 361 407 8.2E-8 T 14-10-2018 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain DB29_04065 9908863efbe5717221296576eabd5039 555 Pfam PF00753 Metallo-beta-lactamase superfamily 20 171 1.8E-14 T 14-10-2018 IPR001279 Metallo-beta-lactamase DB29_02788 d35cd0b793edb0e0ee8ebef0de4fccf7 277 Gene3D G3DSA:3.20.20.100 1 275 1.5E-93 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily DB29_02788 d35cd0b793edb0e0ee8ebef0de4fccf7 277 SUPERFAMILY SSF51430 1 262 1.96E-77 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily DB29_02788 d35cd0b793edb0e0ee8ebef0de4fccf7 277 PRINTS PR00069 Aldo-keto reductase signature 91 109 3.8E-40 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DB29_02788 d35cd0b793edb0e0ee8ebef0de4fccf7 277 PRINTS PR00069 Aldo-keto reductase signature 35 59 3.8E-40 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DB29_02788 d35cd0b793edb0e0ee8ebef0de4fccf7 277 PRINTS PR00069 Aldo-keto reductase signature 195 219 3.8E-40 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DB29_02788 d35cd0b793edb0e0ee8ebef0de4fccf7 277 PRINTS PR00069 Aldo-keto reductase signature 157 186 3.8E-40 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DB29_02788 d35cd0b793edb0e0ee8ebef0de4fccf7 277 PRINTS PR00069 Aldo-keto reductase signature 123 140 3.8E-40 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DB29_02788 d35cd0b793edb0e0ee8ebef0de4fccf7 277 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 123 140 - T 14-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 DB29_02788 d35cd0b793edb0e0ee8ebef0de4fccf7 277 Pfam PF00248 Aldo/keto reductase family 16 259 4.5E-38 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain DB29_02788 d35cd0b793edb0e0ee8ebef0de4fccf7 277 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 39 56 - T 14-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 DB29_02788 d35cd0b793edb0e0ee8ebef0de4fccf7 277 ProSitePatterns PS00063 Aldo/keto reductase family putative active site signature. 228 243 - T 14-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 DB29_02788 d35cd0b793edb0e0ee8ebef0de4fccf7 277 PIRSF PIRSF000097 110 277 8.2E-42 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DB29_02788 d35cd0b793edb0e0ee8ebef0de4fccf7 277 PIRSF PIRSF000097 1 116 1.2E-30 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DB29_00911 75368ee66fda72b9071f5863b67a09dc 671 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 594 663 1.2E-13 T 14-10-2018 IPR001357 BRCT domain DB29_00911 75368ee66fda72b9071f5863b67a09dc 671 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 115 144 - T 14-10-2018 IPR018239 NAD-dependent DNA ligase, active site DB29_00911 75368ee66fda72b9071f5863b67a09dc 671 Gene3D G3DSA:3.30.470.90 73 313 1.3E-107 T 14-10-2018 DB29_00911 75368ee66fda72b9071f5863b67a09dc 671 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 5 314 2.3E-129 T 14-10-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 DB29_00911 75368ee66fda72b9071f5863b67a09dc 671 Gene3D G3DSA:1.10.287.610 1 72 1.5E-24 T 14-10-2018 DB29_00911 75368ee66fda72b9071f5863b67a09dc 671 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 318 394 3.2E-33 T 14-10-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 DB29_00911 75368ee66fda72b9071f5863b67a09dc 671 Gene3D G3DSA:1.10.150.20 500 577 1.5E-27 T 14-10-2018 DB29_00911 75368ee66fda72b9071f5863b67a09dc 671 PIRSF PIRSF001604 1 671 6.6E-259 T 14-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 DB29_00911 75368ee66fda72b9071f5863b67a09dc 671 SUPERFAMILY SSF47781 399 580 1.04E-64 T 14-10-2018 IPR010994 RuvA domain 2-like DB29_00911 75368ee66fda72b9071f5863b67a09dc 671 SMART SM00278 475 494 0.23 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 DB29_00911 75368ee66fda72b9071f5863b67a09dc 671 SMART SM00278 539 558 0.38 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 DB29_00911 75368ee66fda72b9071f5863b67a09dc 671 SMART SM00278 441 460 41.0 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 DB29_00911 75368ee66fda72b9071f5863b67a09dc 671 Hamap MF_01588 DNA ligase [ligA]. 4 666 53.625 T 14-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 DB29_00911 75368ee66fda72b9071f5863b67a09dc 671 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 403 429 1.5E-9 T 14-10-2018 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 DB29_00911 75368ee66fda72b9071f5863b67a09dc 671 Gene3D G3DSA:2.40.50.140 314 386 7.3E-29 T 14-10-2018 DB29_00911 75368ee66fda72b9071f5863b67a09dc 671 SMART SM00292 592 669 8.9E-14 T 14-10-2018 IPR001357 BRCT domain DB29_00911 75368ee66fda72b9071f5863b67a09dc 671 Gene3D G3DSA:1.10.150.20 427 499 3.7E-30 T 14-10-2018 DB29_00911 75368ee66fda72b9071f5863b67a09dc 671 Gene3D G3DSA:2.20.70.80 387 424 8.3E-11 T 14-10-2018 DB29_00911 75368ee66fda72b9071f5863b67a09dc 671 SUPERFAMILY SSF56091 2 312 1.35E-123 T 14-10-2018 DB29_00911 75368ee66fda72b9071f5863b67a09dc 671 SUPERFAMILY SSF50249 313 396 3.6E-27 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DB29_00911 75368ee66fda72b9071f5863b67a09dc 671 SUPERFAMILY SSF52113 591 668 2.76E-20 T 14-10-2018 IPR036420 BRCT domain superfamily DB29_00911 75368ee66fda72b9071f5863b67a09dc 671 Gene3D G3DSA:3.40.50.10190 578 669 7.0E-27 T 14-10-2018 IPR036420 BRCT domain superfamily DB29_00911 75368ee66fda72b9071f5863b67a09dc 671 SMART SM00532 5 443 1.3E-276 T 14-10-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 DB29_00911 75368ee66fda72b9071f5863b67a09dc 671 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 14 662 7.7E-269 T 14-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 DB29_00911 75368ee66fda72b9071f5863b67a09dc 671 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 327 342 - T 14-10-2018 IPR033136 NAD-dependent DNA ligase, conserved site DB29_00911 75368ee66fda72b9071f5863b67a09dc 671 Pfam PF12826 Helix-hairpin-helix motif 505 567 7.0E-24 T 14-10-2018 DB29_00911 75368ee66fda72b9071f5863b67a09dc 671 Pfam PF14520 Helix-hairpin-helix domain 443 494 5.6E-4 T 14-10-2018 DB29_02552 bc1879ff7670a533fcef2d9fd42ea734 298 Gene3D G3DSA:3.30.420.40 3 289 5.9E-65 T 14-10-2018 DB29_02552 bc1879ff7670a533fcef2d9fd42ea734 298 SUPERFAMILY SSF53067 1 105 1.08E-15 T 14-10-2018 DB29_02552 bc1879ff7670a533fcef2d9fd42ea734 298 Gene3D G3DSA:3.30.420.40 109 280 5.9E-65 T 14-10-2018 DB29_02552 bc1879ff7670a533fcef2d9fd42ea734 298 SUPERFAMILY SSF53067 110 292 3.45E-37 T 14-10-2018 DB29_02552 bc1879ff7670a533fcef2d9fd42ea734 298 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 4 289 5.0E-23 T 14-10-2018 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type Reactome: R-HSA-446210 DB29_02217 24a5036510a65edc53a843c57c1119dc 303 SUPERFAMILY SSF111331 4 298 1.1E-61 T 14-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily DB29_02217 24a5036510a65edc53a843c57c1119dc 303 Gene3D G3DSA:2.60.200.40 126 282 1.6E-70 T 14-10-2018 DB29_02217 24a5036510a65edc53a843c57c1119dc 303 Gene3D G3DSA:3.40.50.10330 9 125 1.6E-70 T 14-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 DB29_02217 24a5036510a65edc53a843c57c1119dc 303 Pfam PF00781 Diacylglycerol kinase catalytic domain 6 127 1.6E-31 T 14-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 DB29_02217 24a5036510a65edc53a843c57c1119dc 303 TIGRFAM TIGR00147 TIGR00147: lipid kinase, YegS/Rv2252/BmrU family 5 293 1.3E-59 T 14-10-2018 IPR005218 Diacylglycerol/lipid kinase DB29_02217 24a5036510a65edc53a843c57c1119dc 303 SMART SM00046 6 132 1.1E-12 T 14-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 DB29_03844 defe267aeeb87a298137af3962995932 220 Gene3D G3DSA:3.30.70.1450 138 217 4.2E-23 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 DB29_03844 defe267aeeb87a298137af3962995932 220 Pfam PF02080 TrkA-C domain 152 215 9.9E-14 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 DB29_03844 defe267aeeb87a298137af3962995932 220 Gene3D G3DSA:3.40.50.720 1 137 1.3E-35 T 14-10-2018 DB29_03844 defe267aeeb87a298137af3962995932 220 Pfam PF02254 TrkA-N domain 5 120 9.5E-28 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 DB29_03844 defe267aeeb87a298137af3962995932 220 SUPERFAMILY SSF51735 3 134 1.52E-35 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_03844 defe267aeeb87a298137af3962995932 220 SUPERFAMILY SSF116726 130 216 1.83E-21 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 DB29_03176 03f69fa9fcbf5a33fad8610a02ffb284 296 Gene3D G3DSA:1.10.3720.10 3 287 5.9E-75 T 14-10-2018 IPR035906 MetI-like superfamily DB29_03176 03f69fa9fcbf5a33fad8610a02ffb284 296 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 289 1.3E-10 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DB29_03176 03f69fa9fcbf5a33fad8610a02ffb284 296 SUPERFAMILY SSF161098 9 296 3.4E-58 T 14-10-2018 IPR035906 MetI-like superfamily DB29_02320 242b1f7b91280da4c84c03a742062704 447 Pfam PF07497 Rho termination factor, RNA-binding domain 78 151 7.1E-31 T 14-10-2018 IPR011113 Rho termination factor, RNA-binding domain GO:0003723|GO:0006353 DB29_02320 242b1f7b91280da4c84c03a742062704 447 SMART SM00357 79 144 8.2E-19 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 DB29_02320 242b1f7b91280da4c84c03a742062704 447 Hamap MF_01884 Transcription termination factor Rho [rho]. 28 440 212.201 T 14-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 DB29_02320 242b1f7b91280da4c84c03a742062704 447 SUPERFAMILY SSF50249 76 151 5.14E-23 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DB29_02320 242b1f7b91280da4c84c03a742062704 447 Gene3D G3DSA:2.40.50.140 73 149 3.2E-29 T 14-10-2018 DB29_02320 242b1f7b91280da4c84c03a742062704 447 Gene3D G3DSA:3.40.50.300 157 438 1.3E-120 T 14-10-2018 DB29_02320 242b1f7b91280da4c84c03a742062704 447 SUPERFAMILY SSF52540 116 394 4.66E-65 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_02320 242b1f7b91280da4c84c03a742062704 447 TIGRFAM TIGR00767 rho: transcription termination factor Rho 29 438 8.0E-200 T 14-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 DB29_02320 242b1f7b91280da4c84c03a742062704 447 Pfam PF07498 Rho termination factor, N-terminal domain 32 74 8.3E-15 T 14-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 DB29_02320 242b1f7b91280da4c84c03a742062704 447 SMART SM00382 193 378 1.3E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_02320 242b1f7b91280da4c84c03a742062704 447 Gene3D G3DSA:1.10.720.10 26 72 5.5E-20 T 14-10-2018 DB29_02320 242b1f7b91280da4c84c03a742062704 447 SUPERFAMILY SSF68912 28 74 5.49E-11 T 14-10-2018 IPR036269 Rho termination factor, N-terminal domain superfamily DB29_02320 242b1f7b91280da4c84c03a742062704 447 SMART SM00959 32 74 2.9E-16 T 14-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 DB29_02320 242b1f7b91280da4c84c03a742062704 447 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 183 386 8.3E-19 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DB29_00151 32d0eadf99c4f03e676ee9ec2b5e1d27 259 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB29_00151 32d0eadf99c4f03e676ee9ec2b5e1d27 259 Pfam PF00005 ABC transporter 17 167 1.1E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB29_00151 32d0eadf99c4f03e676ee9ec2b5e1d27 259 Gene3D G3DSA:3.40.50.300 1 256 1.2E-71 T 14-10-2018 DB29_00151 32d0eadf99c4f03e676ee9ec2b5e1d27 259 SUPERFAMILY SSF52540 2 230 4.64E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_00151 32d0eadf99c4f03e676ee9ec2b5e1d27 259 SMART SM00382 26 215 1.0E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_00265 3ba4b3a68d16b44f66c400a509df3358 368 Gene3D G3DSA:3.50.50.60 5 347 1.1E-90 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB29_00265 3ba4b3a68d16b44f66c400a509df3358 368 Gene3D G3DSA:3.30.9.10 90 309 1.1E-90 T 14-10-2018 DB29_00265 3ba4b3a68d16b44f66c400a509df3358 368 TIGRFAM TIGR02352 thiamin_ThiO: glycine oxidase ThiO 5 353 5.1E-114 T 14-10-2018 IPR012727 Glycine oxidase ThiO GO:0016491|GO:0050660 KEGG: 00730+1.4.3.19|MetaCyc: PWY-7396|MetaCyc: PWY-7806 DB29_00265 3ba4b3a68d16b44f66c400a509df3358 368 SUPERFAMILY SSF54373 223 309 1.27E-16 T 14-10-2018 DB29_00265 3ba4b3a68d16b44f66c400a509df3358 368 Pfam PF01266 FAD dependent oxidoreductase 3 347 2.4E-62 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 DB29_00265 3ba4b3a68d16b44f66c400a509df3358 368 SUPERFAMILY SSF51905 4 367 9.19E-50 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB29_03360 717d38990440a8a487b4885eb722f73c 433 SUPERFAMILY SSF55021 350 422 8.51E-11 T 14-10-2018 DB29_03360 717d38990440a8a487b4885eb722f73c 433 SUPERFAMILY SSF51735 5 160 1.16E-32 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_03360 717d38990440a8a487b4885eb722f73c 433 Gene3D G3DSA:3.30.70.260 346 419 5.6E-149 T 14-10-2018 DB29_03360 717d38990440a8a487b4885eb722f73c 433 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 12 131 2.4E-19 T 14-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 DB29_03360 717d38990440a8a487b4885eb722f73c 433 Gene3D G3DSA:3.30.360.10 138 345 5.6E-149 T 14-10-2018 DB29_03360 717d38990440a8a487b4885eb722f73c 433 Gene3D G3DSA:3.40.50.720 6 338 5.6E-149 T 14-10-2018 DB29_03360 717d38990440a8a487b4885eb722f73c 433 Pfam PF00742 Homoserine dehydrogenase 139 317 8.4E-66 T 14-10-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 DB29_03360 717d38990440a8a487b4885eb722f73c 433 SUPERFAMILY SSF55347 139 304 1.37E-53 T 14-10-2018 DB29_03360 717d38990440a8a487b4885eb722f73c 433 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 354 419 0.007 T 14-10-2018 DB29_03360 717d38990440a8a487b4885eb722f73c 433 Pfam PF01842 ACT domain 353 417 1.2E-9 T 14-10-2018 IPR002912 ACT domain DB29_03360 717d38990440a8a487b4885eb722f73c 433 PIRSF PIRSF000098 3 431 3.6E-165 T 14-10-2018 IPR016204 Homoserine dehydrogenase GO:0004412|GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 DB29_03360 717d38990440a8a487b4885eb722f73c 433 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 185 207 - T 14-10-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 DB29_00440 7164a739c6bda22b06e2132e3a558c83 402 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 181 203 - T 14-10-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 DB29_00440 7164a739c6bda22b06e2132e3a558c83 402 Gene3D G3DSA:3.30.360.10 146 297 2.0E-100 T 14-10-2018 DB29_00440 7164a739c6bda22b06e2132e3a558c83 402 SUPERFAMILY SSF51735 2 157 2.47E-25 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_00440 7164a739c6bda22b06e2132e3a558c83 402 SUPERFAMILY SSF55347 136 301 5.04E-44 T 14-10-2018 DB29_00440 7164a739c6bda22b06e2132e3a558c83 402 Gene3D G3DSA:3.40.50.720 4 314 2.0E-100 T 14-10-2018 DB29_00440 7164a739c6bda22b06e2132e3a558c83 402 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 10 125 1.0E-11 T 14-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 DB29_00440 7164a739c6bda22b06e2132e3a558c83 402 PIRSF PIRSF036497 1 321 1.0E-85 T 14-10-2018 IPR022697 Homoserine dehydrogenase lacking ACT domain GO:0004412 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 DB29_00440 7164a739c6bda22b06e2132e3a558c83 402 Pfam PF00742 Homoserine dehydrogenase 136 314 9.5E-53 T 14-10-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 DB29_01456 661ac8c1238bc0e1e59607762c8c699d 499 TIGRFAM TIGR01312 XylB: xylulokinase 5 484 2.9E-186 T 14-10-2018 IPR006000 Xylulokinase GO:0004856|GO:0005997 KEGG: 00040+2.7.1.17 DB29_01456 661ac8c1238bc0e1e59607762c8c699d 499 Gene3D G3DSA:3.30.420.40 1 239 6.3E-89 T 14-10-2018 DB29_01456 661ac8c1238bc0e1e59607762c8c699d 499 Gene3D G3DSA:3.30.420.40 249 491 1.1E-77 T 14-10-2018 DB29_01456 661ac8c1238bc0e1e59607762c8c699d 499 SUPERFAMILY SSF53067 249 488 1.15E-67 T 14-10-2018 DB29_01456 661ac8c1238bc0e1e59607762c8c699d 499 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 4 247 2.1E-71 T 14-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 DB29_01456 661ac8c1238bc0e1e59607762c8c699d 499 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 258 442 2.8E-34 T 14-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 DB29_01456 661ac8c1238bc0e1e59607762c8c699d 499 PIRSF PIRSF000538 1 496 1.1E-164 T 14-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 DB29_01456 661ac8c1238bc0e1e59607762c8c699d 499 SUPERFAMILY SSF53067 3 249 2.13E-77 T 14-10-2018 DB29_01456 661ac8c1238bc0e1e59607762c8c699d 499 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 132 144 - T 14-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 DB29_02332 20334a43c85c430e015c8de6b8499568 143 SUPERFAMILY SSF52788 1 139 1.31E-34 T 14-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily DB29_02332 20334a43c85c430e015c8de6b8499568 143 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 75 90 4.1E-10 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 DB29_02332 20334a43c85c430e015c8de6b8499568 143 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 112 127 4.1E-10 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 DB29_02332 20334a43c85c430e015c8de6b8499568 143 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 5 22 4.1E-10 T 14-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 DB29_02332 20334a43c85c430e015c8de6b8499568 143 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 5 137 1.3E-29 T 14-10-2018 IPR023485 Phosphotyrosine protein phosphatase I DB29_02332 20334a43c85c430e015c8de6b8499568 143 Gene3D G3DSA:3.40.50.2300 2 143 1.3E-44 T 14-10-2018 DB29_02332 20334a43c85c430e015c8de6b8499568 143 SMART SM00226 3 140 1.2E-35 T 14-10-2018 IPR023485 Phosphotyrosine protein phosphatase I DB29_00155 9d1b7508ceb08dc7e5970d4e2c1f7d1f 238 SMART SM00448 5 115 4.3E-50 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DB29_00155 9d1b7508ceb08dc7e5970d4e2c1f7d1f 238 SUPERFAMILY SSF52172 4 190 1.07E-44 T 14-10-2018 IPR011006 CheY-like superfamily DB29_00155 9d1b7508ceb08dc7e5970d4e2c1f7d1f 238 Gene3D G3DSA:3.40.50.2300 1 135 3.4E-43 T 14-10-2018 DB29_00155 9d1b7508ceb08dc7e5970d4e2c1f7d1f 238 SMART SM00862 156 233 1.2E-25 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DB29_00155 9d1b7508ceb08dc7e5970d4e2c1f7d1f 238 Gene3D G3DSA:1.10.10.10 136 237 1.9E-35 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_00155 9d1b7508ceb08dc7e5970d4e2c1f7d1f 238 Pfam PF00072 Response regulator receiver domain 8 115 6.3E-34 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DB29_00155 9d1b7508ceb08dc7e5970d4e2c1f7d1f 238 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 233 4.7E-27 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DB29_02869 3f3e3a62a51aacf414f9b87f6e2877f1 1068 PRINTS PR00702 Acriflavin resistance protein family signature 591 608 1.1E-20 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DB29_02869 3f3e3a62a51aacf414f9b87f6e2877f1 1068 PRINTS PR00702 Acriflavin resistance protein family signature 39 57 1.1E-20 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DB29_02869 3f3e3a62a51aacf414f9b87f6e2877f1 1068 PRINTS PR00702 Acriflavin resistance protein family signature 490 513 1.1E-20 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DB29_02869 3f3e3a62a51aacf414f9b87f6e2877f1 1068 PRINTS PR00702 Acriflavin resistance protein family signature 515 538 1.1E-20 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DB29_02869 3f3e3a62a51aacf414f9b87f6e2877f1 1068 Gene3D G3DSA:1.20.1640.10 855 1067 1.4E-52 T 14-10-2018 DB29_02869 3f3e3a62a51aacf414f9b87f6e2877f1 1068 Gene3D G3DSA:3.30.2090.10 754 840 9.3E-8 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DB29_02869 3f3e3a62a51aacf414f9b87f6e2877f1 1068 SUPERFAMILY SSF82693 41 132 2.67E-17 T 14-10-2018 DB29_02869 3f3e3a62a51aacf414f9b87f6e2877f1 1068 SUPERFAMILY SSF82714 755 839 1.24E-8 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DB29_02869 3f3e3a62a51aacf414f9b87f6e2877f1 1068 Pfam PF00873 AcrB/AcrD/AcrF family 4 244 9.3E-40 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DB29_02869 3f3e3a62a51aacf414f9b87f6e2877f1 1068 Pfam PF00873 AcrB/AcrD/AcrF family 305 1058 2.4E-163 T 14-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 DB29_02869 3f3e3a62a51aacf414f9b87f6e2877f1 1068 SUPERFAMILY SSF82866 342 539 1.03E-42 T 14-10-2018 DB29_02869 3f3e3a62a51aacf414f9b87f6e2877f1 1068 Gene3D G3DSA:3.30.70.1430 41 131 1.1E-15 T 14-10-2018 DB29_02869 3f3e3a62a51aacf414f9b87f6e2877f1 1068 SUPERFAMILY SSF82866 839 1063 4.71E-45 T 14-10-2018 DB29_02869 3f3e3a62a51aacf414f9b87f6e2877f1 1068 SUPERFAMILY SSF82693 134 371 3.49E-14 T 14-10-2018 DB29_02869 3f3e3a62a51aacf414f9b87f6e2877f1 1068 Gene3D G3DSA:3.30.2090.10 180 321 1.5E-5 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DB29_02869 3f3e3a62a51aacf414f9b87f6e2877f1 1068 SUPERFAMILY SSF82714 182 246 1.44E-6 T 14-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains DB29_02869 3f3e3a62a51aacf414f9b87f6e2877f1 1068 Gene3D G3DSA:1.20.1640.10 347 559 8.8E-56 T 14-10-2018 DB29_01969 9eb8a8d7b849e2d44c6593bc99c23f25 1180 SMART SM00490 847 931 2.0E-19 T 14-10-2018 IPR001650 Helicase, C-terminal DB29_01969 9eb8a8d7b849e2d44c6593bc99c23f25 1180 SUPERFAMILY SSF141259 491 568 9.29E-25 T 14-10-2018 IPR036101 CarD-like/TRCF domain superfamily DB29_01969 9eb8a8d7b849e2d44c6593bc99c23f25 1180 SUPERFAMILY SSF52540 544 804 1.46E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_01969 9eb8a8d7b849e2d44c6593bc99c23f25 1180 SMART SM00982 1025 1125 1.5E-36 T 14-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 DB29_01969 9eb8a8d7b849e2d44c6593bc99c23f25 1180 Gene3D G3DSA:3.30.2060.10 140 226 2.6E-59 T 14-10-2018 DB29_01969 9eb8a8d7b849e2d44c6593bc99c23f25 1180 SUPERFAMILY SSF52540 15 369 1.64E-85 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_01969 9eb8a8d7b849e2d44c6593bc99c23f25 1180 Gene3D G3DSA:3.40.50.11180 35 330 2.6E-59 T 14-10-2018 DB29_01969 9eb8a8d7b849e2d44c6593bc99c23f25 1180 Gene3D G3DSA:3.40.50.300 563 802 1.9E-244 T 14-10-2018 DB29_01969 9eb8a8d7b849e2d44c6593bc99c23f25 1180 Gene3D G3DSA:2.30.30.840 504 562 1.9E-244 T 14-10-2018 DB29_01969 9eb8a8d7b849e2d44c6593bc99c23f25 1180 SMART SM01058 500 597 3.2E-48 T 14-10-2018 IPR003711 CarD-like/TRCF domain DB29_01969 9eb8a8d7b849e2d44c6593bc99c23f25 1180 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 38 1119 28.817 T 14-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 DB29_01969 9eb8a8d7b849e2d44c6593bc99c23f25 1180 Gene3D G3DSA:3.40.50.300 499 1010 1.9E-244 T 14-10-2018 DB29_01969 9eb8a8d7b849e2d44c6593bc99c23f25 1180 SUPERFAMILY SSF143517 1012 1168 2.88E-37 T 14-10-2018 IPR037235 TRCF-like, C-terminal domain DB29_01969 9eb8a8d7b849e2d44c6593bc99c23f25 1180 SUPERFAMILY SSF52540 379 491 2.43E-26 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_01969 9eb8a8d7b849e2d44c6593bc99c23f25 1180 SUPERFAMILY SSF52540 803 1010 1.12E-49 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_01969 9eb8a8d7b849e2d44c6593bc99c23f25 1180 Pfam PF03461 TRCF domain 1027 1116 1.5E-27 T 14-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 DB29_01969 9eb8a8d7b849e2d44c6593bc99c23f25 1180 Pfam PF00271 Helicase conserved C-terminal domain 828 930 1.2E-17 T 14-10-2018 IPR001650 Helicase, C-terminal DB29_01969 9eb8a8d7b849e2d44c6593bc99c23f25 1180 SMART SM00487 621 811 5.1E-36 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DB29_01969 9eb8a8d7b849e2d44c6593bc99c23f25 1180 Pfam PF02559 CarD-like/TRCF domain 501 596 1.7E-30 T 14-10-2018 IPR003711 CarD-like/TRCF domain DB29_01969 9eb8a8d7b849e2d44c6593bc99c23f25 1180 Pfam PF00270 DEAD/DEAH box helicase 626 785 5.7E-18 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 DB29_01969 9eb8a8d7b849e2d44c6593bc99c23f25 1180 Gene3D G3DSA:3.90.1150.50 1021 1180 2.4E-41 T 14-10-2018 IPR037235 TRCF-like, C-terminal domain DB29_01969 9eb8a8d7b849e2d44c6593bc99c23f25 1180 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 159 1098 0.0 T 14-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 DB29_02790 58a9d72991fc3a3120c19ee63f83b8cc 261 SMART SM00342 22 105 1.9E-24 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DB29_02790 58a9d72991fc3a3120c19ee63f83b8cc 261 SUPERFAMILY SSF46689 7 55 1.34E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DB29_02790 58a9d72991fc3a3120c19ee63f83b8cc 261 SUPERFAMILY SSF46689 58 108 3.36E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DB29_02790 58a9d72991fc3a3120c19ee63f83b8cc 261 Pfam PF12833 Helix-turn-helix domain 28 106 7.8E-18 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DB29_02790 58a9d72991fc3a3120c19ee63f83b8cc 261 Gene3D G3DSA:1.10.10.60 2 111 2.4E-27 T 14-10-2018 DB29_00501 5a36ff37ca819d32b800803915f4c508 467 SMART SM00387 342 444 8.2E-21 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DB29_00501 5a36ff37ca819d32b800803915f4c508 467 Gene3D G3DSA:1.10.287.130 180 295 1.3E-18 T 14-10-2018 DB29_00501 5a36ff37ca819d32b800803915f4c508 467 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 346 443 9.2E-13 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DB29_00501 5a36ff37ca819d32b800803915f4c508 467 SMART SM00388 233 299 1.3E-10 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DB29_00501 5a36ff37ca819d32b800803915f4c508 467 SUPERFAMILY SSF55874 303 444 4.06E-27 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB29_00501 5a36ff37ca819d32b800803915f4c508 467 Pfam PF00512 His Kinase A (phospho-acceptor) domain 234 297 1.7E-11 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DB29_00501 5a36ff37ca819d32b800803915f4c508 467 PRINTS PR00344 Bacterial sensor protein C-terminal signature 428 441 1.8E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB29_00501 5a36ff37ca819d32b800803915f4c508 467 PRINTS PR00344 Bacterial sensor protein C-terminal signature 377 391 1.8E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB29_00501 5a36ff37ca819d32b800803915f4c508 467 PRINTS PR00344 Bacterial sensor protein C-terminal signature 394 404 1.8E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB29_00501 5a36ff37ca819d32b800803915f4c508 467 PRINTS PR00344 Bacterial sensor protein C-terminal signature 405 423 1.8E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB29_00501 5a36ff37ca819d32b800803915f4c508 467 Gene3D G3DSA:3.30.565.10 310 447 1.1E-24 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB29_00501 5a36ff37ca819d32b800803915f4c508 467 SUPERFAMILY SSF47384 216 297 5.89E-15 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DB29_04213 8e83c164ca5202e672bb62849d94d036 269 Gene3D G3DSA:1.10.1020.10 58 153 9.7E-36 T 14-10-2018 IPR023095 Adenine-specific methyltransferase, domain 2 GO:0009007 DB29_04213 8e83c164ca5202e672bb62849d94d036 269 Gene3D G3DSA:3.40.50.150 8 226 9.7E-36 T 14-10-2018 DB29_04213 8e83c164ca5202e672bb62849d94d036 269 PIRSF PIRSF000398 1 260 4.0E-47 T 14-10-2018 IPR012263 Adenine modification methylase, M.EcoRV-type GO:0009007|GO:0032775 DB29_04213 8e83c164ca5202e672bb62849d94d036 269 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 10 208 3.6E-26 T 14-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 DB29_04213 8e83c164ca5202e672bb62849d94d036 269 SUPERFAMILY SSF53335 6 254 2.11E-44 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DB29_04213 8e83c164ca5202e672bb62849d94d036 269 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 173 185 2.3E-11 T 14-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 DB29_04213 8e83c164ca5202e672bb62849d94d036 269 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 10 26 2.3E-11 T 14-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 DB29_04213 8e83c164ca5202e672bb62849d94d036 269 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 31 45 2.3E-11 T 14-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 DB29_04213 8e83c164ca5202e672bb62849d94d036 269 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 51 64 2.3E-11 T 14-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 DB29_03061 b3e9866050189a7a6019fb1ddeffb93e 252 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 2.0E-9 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DB29_03061 b3e9866050189a7a6019fb1ddeffb93e 252 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 2.0E-9 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DB29_03061 b3e9866050189a7a6019fb1ddeffb93e 252 SMART SM00420 6 58 7.0E-20 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DB29_03061 b3e9866050189a7a6019fb1ddeffb93e 252 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 14-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 DB29_03061 b3e9866050189a7a6019fb1ddeffb93e 252 Pfam PF08220 DeoR-like helix-turn-helix domain 6 57 2.0E-18 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DB29_03061 b3e9866050189a7a6019fb1ddeffb93e 252 SUPERFAMILY SSF100950 72 231 9.57E-29 T 14-10-2018 IPR037171 NagB/RpiA transferase-like DB29_03061 b3e9866050189a7a6019fb1ddeffb93e 252 SMART SM01134 71 230 1.1E-59 T 14-10-2018 DB29_03061 b3e9866050189a7a6019fb1ddeffb93e 252 Pfam PF00455 DeoR C terminal sensor domain 73 229 6.5E-47 T 14-10-2018 IPR014036 DeoR C-terminal sensor domain DB29_03061 b3e9866050189a7a6019fb1ddeffb93e 252 Gene3D G3DSA:1.10.10.10 1 63 3.3E-8 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_03061 b3e9866050189a7a6019fb1ddeffb93e 252 SUPERFAMILY SSF46785 4 58 1.85E-13 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_03779 913063f14353ffd5022050ed56b8e9fb 143 Hamap MF_00732 Transcriptional regulator MntR [mntR]. 1 139 43.325 T 14-10-2018 IPR022897 HTH-type transcription regulator MntR DB29_03779 913063f14353ffd5022050ed56b8e9fb 143 Pfam PF02742 Iron dependent repressor, metal binding and dimerisation domain 63 124 8.2E-18 T 14-10-2018 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 DB29_03779 913063f14353ffd5022050ed56b8e9fb 143 SUPERFAMILY SSF47979 63 124 1.88E-17 T 14-10-2018 IPR036421 Iron dependent repressor, metal binding and dimerisation domain superfamily GO:0046914|GO:0046983 DB29_03779 913063f14353ffd5022050ed56b8e9fb 143 Gene3D G3DSA:1.10.60.10 74 141 8.3E-31 T 14-10-2018 IPR036421 Iron dependent repressor, metal binding and dimerisation domain superfamily GO:0046914|GO:0046983 DB29_03779 913063f14353ffd5022050ed56b8e9fb 143 SMART SM00529 24 123 2.7E-39 T 14-10-2018 IPR022689 Iron dependent repressor GO:0003700|GO:0006355|GO:0046914 DB29_03779 913063f14353ffd5022050ed56b8e9fb 143 SUPERFAMILY SSF46785 3 62 1.44E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_03779 913063f14353ffd5022050ed56b8e9fb 143 Gene3D G3DSA:1.10.10.10 2 73 1.7E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_03779 913063f14353ffd5022050ed56b8e9fb 143 Pfam PF01325 Iron dependent repressor, N-terminal DNA binding domain 3 60 1.4E-24 T 14-10-2018 IPR022687 DTXR-type HTH domain GO:0003677 DB29_03120 a8e228d8b7830c3b0708a6cc86f77bf2 131 Pfam PF16888 Domain of unknown function (DUF5082) 5 124 5.6E-35 T 14-10-2018 IPR031681 Protein of unknown function DUF5082 DB29_03120 a8e228d8b7830c3b0708a6cc86f77bf2 131 ProDom PD338809 BH2346 YXIB BH4015 BH0976 PREFOLDIN 16 106 4.0E-46 T 14-10-2018 DB29_03120 a8e228d8b7830c3b0708a6cc86f77bf2 131 SUPERFAMILY SSF46579 5 128 3.4E-5 T 14-10-2018 DB29_00123 3c3bd8d7b6502752db150acf0f0c864a 418 SUPERFAMILY SSF53223 11 187 2.59E-63 T 14-10-2018 DB29_00123 3c3bd8d7b6502752db150acf0f0c864a 418 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 104 117 - T 14-10-2018 IPR033524 Leu/Phe/Val dehydrogenases active site Reactome: R-HSA-2151201|Reactome: R-HSA-70614 DB29_00123 3c3bd8d7b6502752db150acf0f0c864a 418 Gene3D G3DSA:1.10.8.1210 12 346 5.9E-133 T 14-10-2018 DB29_00123 3c3bd8d7b6502752db150acf0f0c864a 418 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 39 167 1.4E-52 T 14-10-2018 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 DB29_00123 3c3bd8d7b6502752db150acf0f0c864a 418 Gene3D G3DSA:3.40.50.10860 37 191 5.9E-133 T 14-10-2018 DB29_00123 3c3bd8d7b6502752db150acf0f0c864a 418 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 185 416 2.6E-72 T 14-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 DB29_00123 3c3bd8d7b6502752db150acf0f0c864a 418 SUPERFAMILY SSF51735 185 417 2.32E-73 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_00123 3c3bd8d7b6502752db150acf0f0c864a 418 PIRSF PIRSF000185 5 418 2.1E-165 T 14-10-2018 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 DB29_00123 3c3bd8d7b6502752db150acf0f0c864a 418 SMART SM00839 187 416 7.3E-85 T 14-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 DB29_00123 3c3bd8d7b6502752db150acf0f0c864a 418 Gene3D G3DSA:3.40.50.720 192 345 5.9E-133 T 14-10-2018 DB29_00123 3c3bd8d7b6502752db150acf0f0c864a 418 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 96 110 3.0E-29 T 14-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 DB29_00123 3c3bd8d7b6502752db150acf0f0c864a 418 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 344 355 3.0E-29 T 14-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 DB29_00123 3c3bd8d7b6502752db150acf0f0c864a 418 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 218 238 3.0E-29 T 14-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 DB29_00123 3c3bd8d7b6502752db150acf0f0c864a 418 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 176 198 3.0E-29 T 14-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 DB29_00123 3c3bd8d7b6502752db150acf0f0c864a 418 Gene3D G3DSA:1.10.8.1210 373 418 7.3E-18 T 14-10-2018 DB29_03997 c750122aa43587f7f127e56012696f05 304 PIRSF PIRSF001553 1 291 2.5E-133 T 14-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 DB29_03997 c750122aa43587f7f127e56012696f05 304 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 3 288 6.5E-147 T 14-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 DB29_03997 c750122aa43587f7f127e56012696f05 304 Pfam PF02629 CoA binding domain 6 99 2.1E-30 T 14-10-2018 IPR003781 CoA-binding GO:0048037 DB29_03997 c750122aa43587f7f127e56012696f05 304 SMART SM00881 4 100 3.9E-33 T 14-10-2018 IPR003781 CoA-binding GO:0048037 DB29_03997 c750122aa43587f7f127e56012696f05 304 PRINTS PR01798 Succinyl-CoA synthase signature 208 221 2.3E-40 T 14-10-2018 DB29_03997 c750122aa43587f7f127e56012696f05 304 PRINTS PR01798 Succinyl-CoA synthase signature 240 257 2.3E-40 T 14-10-2018 DB29_03997 c750122aa43587f7f127e56012696f05 304 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 2.3E-40 T 14-10-2018 DB29_03997 c750122aa43587f7f127e56012696f05 304 PRINTS PR01798 Succinyl-CoA synthase signature 177 195 2.3E-40 T 14-10-2018 DB29_03997 c750122aa43587f7f127e56012696f05 304 Pfam PF00549 CoA-ligase 151 268 1.1E-17 T 14-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 DB29_03997 c750122aa43587f7f127e56012696f05 304 SUPERFAMILY SSF51735 1 122 7.89E-44 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_03997 c750122aa43587f7f127e56012696f05 304 Gene3D G3DSA:3.40.50.261 124 289 5.9E-72 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 DB29_03997 c750122aa43587f7f127e56012696f05 304 Gene3D G3DSA:3.40.50.720 1 123 2.3E-52 T 14-10-2018 DB29_03997 c750122aa43587f7f127e56012696f05 304 Hamap MF_01988 Succinate--CoA ligase [ADP-forming] subunit alpha [sucD]. 1 288 44.084 T 14-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 DB29_03997 c750122aa43587f7f127e56012696f05 304 SUPERFAMILY SSF52210 123 285 1.44E-54 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 DB29_03997 c750122aa43587f7f127e56012696f05 304 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 152 181 - T 14-10-2018 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site DB29_03997 c750122aa43587f7f127e56012696f05 304 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 236 249 - T 14-10-2018 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site DB29_00645 e7078d27f09801e0254446542bb36e4d 204 Pfam PF00440 Bacterial regulatory proteins, tetR family 19 57 7.8E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DB29_00645 e7078d27f09801e0254446542bb36e4d 204 Gene3D G3DSA:1.10.357.10 60 199 2.0E-10 T 14-10-2018 DB29_00645 e7078d27f09801e0254446542bb36e4d 204 Pfam PF16859 Bacterial transcriptional repressor C-terminal 83 193 5.5E-8 T 14-10-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal DB29_00645 e7078d27f09801e0254446542bb36e4d 204 Gene3D G3DSA:1.10.10.60 8 57 3.7E-11 T 14-10-2018 DB29_00645 e7078d27f09801e0254446542bb36e4d 204 SUPERFAMILY SSF46689 9 75 3.2E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DB29_00645 e7078d27f09801e0254446542bb36e4d 204 SUPERFAMILY SSF48498 85 196 1.53E-10 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily DB29_01708 831169c3093917619a7423a65ad080d0 266 Pfam PF00106 short chain dehydrogenase 8 194 9.4E-43 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_01708 831169c3093917619a7423a65ad080d0 266 Gene3D G3DSA:3.40.50.720 2 265 2.2E-66 T 14-10-2018 DB29_01708 831169c3093917619a7423a65ad080d0 266 SUPERFAMILY SSF51735 1 262 1.48E-60 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_01708 831169c3093917619a7423a65ad080d0 266 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 1.0E-6 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_01708 831169c3093917619a7423a65ad080d0 266 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 1.0E-6 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_01708 831169c3093917619a7423a65ad080d0 266 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 1.0E-6 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_01708 831169c3093917619a7423a65ad080d0 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 6.0E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_01708 831169c3093917619a7423a65ad080d0 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 6.0E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_01708 831169c3093917619a7423a65ad080d0 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 225 245 6.0E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_01708 831169c3093917619a7423a65ad080d0 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 6.0E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_01708 831169c3093917619a7423a65ad080d0 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 6.0E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_01708 831169c3093917619a7423a65ad080d0 266 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 6.0E-26 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_00314 e11bab1cc1d3ac247a9fb08967c409ad 603 Pfam PF01807 CHC2 zinc finger 6 100 1.5E-37 T 14-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 DB29_00314 e11bab1cc1d3ac247a9fb08967c409ad 603 PIRSF PIRSF002811 2 601 2.1E-179 T 14-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 DB29_00314 e11bab1cc1d3ac247a9fb08967c409ad 603 SUPERFAMILY SSF57783 4 100 5.61E-35 T 14-10-2018 DB29_00314 e11bab1cc1d3ac247a9fb08967c409ad 603 Pfam PF08275 DNA primase catalytic core, N-terminal domain 133 254 3.0E-38 T 14-10-2018 IPR013264 DNA primase, catalytic core, N-terminal DB29_00314 e11bab1cc1d3ac247a9fb08967c409ad 603 SMART SM00493 261 332 5.3E-18 T 14-10-2018 IPR006171 TOPRIM domain DB29_00314 e11bab1cc1d3ac247a9fb08967c409ad 603 TIGRFAM TIGR01391 dnaG: DNA primase 5 419 1.7E-143 T 14-10-2018 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 DB29_00314 e11bab1cc1d3ac247a9fb08967c409ad 603 SMART SM00400 36 90 1.5E-34 T 14-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 DB29_00314 e11bab1cc1d3ac247a9fb08967c409ad 603 Gene3D G3DSA:3.90.580.10 1 103 6.7E-40 T 14-10-2018 IPR036977 DNA Primase, CHC2-type zinc finger GO:0003677|GO:0006260|GO:0008270 DB29_00314 e11bab1cc1d3ac247a9fb08967c409ad 603 Pfam PF10410 DnaB-helicase binding domain of primase 371 419 6.3E-10 T 14-10-2018 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 DB29_00314 e11bab1cc1d3ac247a9fb08967c409ad 603 Gene3D G3DSA:3.90.980.10 112 242 1.7E-40 T 14-10-2018 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily DB29_00314 e11bab1cc1d3ac247a9fb08967c409ad 603 Pfam PF13155 Toprim-like 265 348 4.1E-21 T 14-10-2018 DB29_00314 e11bab1cc1d3ac247a9fb08967c409ad 603 Hamap MF_00974 DNA primase [dnaG]. 4 591 28.034 T 14-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 DB29_00314 e11bab1cc1d3ac247a9fb08967c409ad 603 SUPERFAMILY SSF56731 118 424 4.32E-96 T 14-10-2018 DB29_00314 e11bab1cc1d3ac247a9fb08967c409ad 603 Gene3D G3DSA:3.40.1360.10 243 366 4.4E-41 T 14-10-2018 DB29_00314 e11bab1cc1d3ac247a9fb08967c409ad 603 SUPERFAMILY SSF48024 465 564 3.92E-8 T 14-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 DB29_00314 e11bab1cc1d3ac247a9fb08967c409ad 603 Gene3D G3DSA:1.10.860.10 468 564 4.1E-28 T 14-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal DB29_00579 c4c712d78301bcd73ecc05e151c04ac6 751 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 376 627 2.8E-52 T 14-10-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 DB29_00579 c4c712d78301bcd73ecc05e151c04ac6 751 Gene3D G3DSA:3.20.20.300 2 354 2.0E-110 T 14-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 DB29_00579 c4c712d78301bcd73ecc05e151c04ac6 751 Gene3D G3DSA:2.60.40.10 630 742 1.3E-32 T 14-10-2018 IPR013783 Immunoglobulin-like fold DB29_00579 c4c712d78301bcd73ecc05e151c04ac6 751 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 255 272 - T 14-10-2018 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 DB29_00579 c4c712d78301bcd73ecc05e151c04ac6 751 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 14 334 1.1E-68 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 DB29_00579 c4c712d78301bcd73ecc05e151c04ac6 751 SMART SM01217 664 733 4.1E-26 T 14-10-2018 IPR026891 Fibronectin type III-like domain DB29_00579 c4c712d78301bcd73ecc05e151c04ac6 751 SUPERFAMILY SSF51445 10 375 3.16E-90 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily DB29_00579 c4c712d78301bcd73ecc05e151c04ac6 751 PRINTS PR00133 Glycosyl hydrolase family 3 signature 255 273 7.1E-14 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 DB29_00579 c4c712d78301bcd73ecc05e151c04ac6 751 PRINTS PR00133 Glycosyl hydrolase family 3 signature 99 118 7.1E-14 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 DB29_00579 c4c712d78301bcd73ecc05e151c04ac6 751 PRINTS PR00133 Glycosyl hydrolase family 3 signature 145 161 7.1E-14 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 DB29_00579 c4c712d78301bcd73ecc05e151c04ac6 751 PRINTS PR00133 Glycosyl hydrolase family 3 signature 80 96 7.1E-14 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 DB29_00579 c4c712d78301bcd73ecc05e151c04ac6 751 PRINTS PR00133 Glycosyl hydrolase family 3 signature 185 201 7.1E-14 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 DB29_00579 c4c712d78301bcd73ecc05e151c04ac6 751 SUPERFAMILY SSF52279 376 630 7.45E-51 T 14-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 DB29_00579 c4c712d78301bcd73ecc05e151c04ac6 751 Gene3D G3DSA:3.40.50.1700 361 629 3.3E-81 T 14-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 DB29_00579 c4c712d78301bcd73ecc05e151c04ac6 751 Pfam PF14310 Fibronectin type III-like domain 664 733 3.1E-17 T 14-10-2018 IPR026891 Fibronectin type III-like domain DB29_01881 20c1fdba8924209492a6f9f41f293669 217 Pfam PF00406 Adenylate kinase 5 190 1.3E-61 T 14-10-2018 DB29_01881 20c1fdba8924209492a6f9f41f293669 217 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 14-10-2018 IPR033690 Adenylate kinase, conserved site KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 DB29_01881 20c1fdba8924209492a6f9f41f293669 217 SUPERFAMILY SSF52540 1 213 3.41E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_01881 20c1fdba8924209492a6f9f41f293669 217 Hamap MF_00235 Adenylate kinase [adk]. 1 213 54.784 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 DB29_01881 20c1fdba8924209492a6f9f41f293669 217 PRINTS PR00094 Adenylate kinase signature 81 97 2.0E-34 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 DB29_01881 20c1fdba8924209492a6f9f41f293669 217 PRINTS PR00094 Adenylate kinase signature 177 191 2.0E-34 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 DB29_01881 20c1fdba8924209492a6f9f41f293669 217 PRINTS PR00094 Adenylate kinase signature 32 46 2.0E-34 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 DB29_01881 20c1fdba8924209492a6f9f41f293669 217 PRINTS PR00094 Adenylate kinase signature 160 175 2.0E-34 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 DB29_01881 20c1fdba8924209492a6f9f41f293669 217 PRINTS PR00094 Adenylate kinase signature 4 17 2.0E-34 T 14-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 DB29_01881 20c1fdba8924209492a6f9f41f293669 217 TIGRFAM TIGR01351 adk: adenylate kinase 2 212 1.4E-80 T 14-10-2018 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 DB29_01881 20c1fdba8924209492a6f9f41f293669 217 Pfam PF05191 Adenylate kinase, active site lid 127 162 7.4E-14 T 14-10-2018 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 DB29_01881 20c1fdba8924209492a6f9f41f293669 217 Gene3D G3DSA:3.40.50.300 1 216 2.0E-84 T 14-10-2018 DB29_0P0025 902411b38f507f5bcfe77964285e58f8 720 Gene3D G3DSA:1.10.290.10 285 414 2.9E-144 T 14-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 DB29_0P0025 902411b38f507f5bcfe77964285e58f8 720 SMART SM00493 1 130 2.0E-4 T 14-10-2018 IPR006171 TOPRIM domain DB29_0P0025 902411b38f507f5bcfe77964285e58f8 720 SMART SM00436 130 226 3.3E-31 T 14-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 DB29_0P0025 902411b38f507f5bcfe77964285e58f8 720 Pfam PF13342 C-terminal repeat of topoisomerase 651 711 1.4E-19 T 14-10-2018 IPR025589 Topoisomerase C-terminal repeat DB29_0P0025 902411b38f507f5bcfe77964285e58f8 720 Gene3D G3DSA:3.40.50.140 1 156 1.4E-43 T 14-10-2018 DB29_0P0025 902411b38f507f5bcfe77964285e58f8 720 Pfam PF01131 DNA topoisomerase 158 590 1.2E-116 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 DB29_0P0025 902411b38f507f5bcfe77964285e58f8 720 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 313 327 - T 14-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 DB29_0P0025 902411b38f507f5bcfe77964285e58f8 720 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 400 416 1.4E-22 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 DB29_0P0025 902411b38f507f5bcfe77964285e58f8 720 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 517 531 1.4E-22 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 DB29_0P0025 902411b38f507f5bcfe77964285e58f8 720 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 318 327 1.4E-22 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 DB29_0P0025 902411b38f507f5bcfe77964285e58f8 720 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 104 117 1.4E-22 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 DB29_0P0025 902411b38f507f5bcfe77964285e58f8 720 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 196 214 1.4E-22 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 DB29_0P0025 902411b38f507f5bcfe77964285e58f8 720 Gene3D G3DSA:1.10.460.10 164 599 2.9E-144 T 14-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 DB29_0P0025 902411b38f507f5bcfe77964285e58f8 720 SUPERFAMILY SSF56712 2 604 9.42E-161 T 14-10-2018 IPR023405 DNA topoisomerase, type IA, core domain DB29_0P0025 902411b38f507f5bcfe77964285e58f8 720 Gene3D G3DSA:2.70.20.10 220 484 2.9E-144 T 14-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 DB29_0P0025 902411b38f507f5bcfe77964285e58f8 720 Pfam PF01751 Toprim domain 3 135 2.1E-7 T 14-10-2018 IPR006171 TOPRIM domain DB29_0P0025 902411b38f507f5bcfe77964285e58f8 720 SMART SM00437 276 554 3.2E-70 T 14-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 DB29_0P0025 902411b38f507f5bcfe77964285e58f8 720 TIGRFAM TIGR01056 topB: DNA topoisomerase III 2 697 3.7E-173 T 14-10-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 DB29_00703 63fad43a03f3022b57ebfa511e3fc25d 453 SUPERFAMILY SSF53720 5 434 9.29E-123 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 DB29_00703 63fad43a03f3022b57ebfa511e3fc25d 453 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 207 214 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 DB29_00703 63fad43a03f3022b57ebfa511e3fc25d 453 Gene3D G3DSA:3.40.309.10 211 405 6.8E-166 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 DB29_00703 63fad43a03f3022b57ebfa511e3fc25d 453 PIRSF PIRSF036492 1 452 1.6E-177 T 14-10-2018 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0006081|GO:0055114 DB29_00703 63fad43a03f3022b57ebfa511e3fc25d 453 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 235 246 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 DB29_00703 63fad43a03f3022b57ebfa511e3fc25d 453 Pfam PF00171 Aldehyde dehydrogenase family 20 424 1.6E-90 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 DB29_00703 63fad43a03f3022b57ebfa511e3fc25d 453 Gene3D G3DSA:3.40.605.10 13 425 6.8E-166 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 DB29_01792 83173b6b64d6f9a96d9c3e1b90840f20 263 Pfam PF13649 Methyltransferase domain 41 134 1.2E-16 T 14-10-2018 DB29_01792 83173b6b64d6f9a96d9c3e1b90840f20 263 Gene3D G3DSA:2.20.25.570 142 212 3.6E-49 T 14-10-2018 DB29_01792 83173b6b64d6f9a96d9c3e1b90840f20 263 Gene3D G3DSA:3.40.50.150 38 245 3.6E-49 T 14-10-2018 DB29_01792 83173b6b64d6f9a96d9c3e1b90840f20 263 SUPERFAMILY SSF53335 9 254 7.02E-38 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DB29_01916 163aaeb92b461b0dd67d0339df0db927 178 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 2 177 28.29 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 DB29_01916 163aaeb92b461b0dd67d0339df0db927 178 SUPERFAMILY SSF82679 2 113 1.57E-41 T 14-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 DB29_01916 163aaeb92b461b0dd67d0339df0db927 178 ProSitePatterns PS01014 Transcription termination factor nusG signature. 160 169 - T 14-10-2018 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site DB29_01916 163aaeb92b461b0dd67d0339df0db927 178 Pfam PF02357 Transcription termination factor nusG 3 110 1.9E-29 T 14-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 DB29_01916 163aaeb92b461b0dd67d0339df0db927 178 SUPERFAMILY SSF50104 121 177 5.42E-18 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily DB29_01916 163aaeb92b461b0dd67d0339df0db927 178 Gene3D G3DSA:3.30.70.940 1 119 3.2E-47 T 14-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 DB29_01916 163aaeb92b461b0dd67d0339df0db927 178 Gene3D G3DSA:2.30.30.30 120 177 4.0E-23 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 DB29_01916 163aaeb92b461b0dd67d0339df0db927 178 PRINTS PR00338 Transcription termination factor NUSG signature 153 169 6.5E-21 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 DB29_01916 163aaeb92b461b0dd67d0339df0db927 178 PRINTS PR00338 Transcription termination factor NUSG signature 135 150 6.5E-21 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 DB29_01916 163aaeb92b461b0dd67d0339df0db927 178 PRINTS PR00338 Transcription termination factor NUSG signature 57 69 6.5E-21 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 DB29_01916 163aaeb92b461b0dd67d0339df0db927 178 SMART SM00739 123 150 4.9E-4 T 14-10-2018 IPR005824 KOW DB29_01916 163aaeb92b461b0dd67d0339df0db927 178 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 5 177 4.7E-67 T 14-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 DB29_01916 163aaeb92b461b0dd67d0339df0db927 178 SMART SM00738 2 113 3.1E-56 T 14-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 DB29_01916 163aaeb92b461b0dd67d0339df0db927 178 Pfam PF00467 KOW motif 129 158 2.8E-5 T 14-10-2018 IPR005824 KOW DB29_03780 2f28d8cd6b36fd1947b384ab3b2ccc8a 298 Gene3D G3DSA:3.40.1090.10 2 118 1.8E-22 T 14-10-2018 DB29_03780 2f28d8cd6b36fd1947b384ab3b2ccc8a 298 SUPERFAMILY SSF52151 6 286 1.07E-38 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase DB29_03780 2f28d8cd6b36fd1947b384ab3b2ccc8a 298 Pfam PF01734 Patatin-like phospholipase 6 197 7.6E-32 T 14-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 DB29_04331 f05530c25c85d11d81e653d89cc5dc84 494 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 155 476 2.5E-26 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DB29_04331 f05530c25c85d11d81e653d89cc5dc84 494 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 23 140 9.6E-20 T 14-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 DB29_04331 f05530c25c85d11d81e653d89cc5dc84 494 Gene3D G3DSA:1.10.1060.10 7 153 1.1E-17 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 DB29_04331 f05530c25c85d11d81e653d89cc5dc84 494 TIGRFAM TIGR01317 GOGAT_sm_gam: glutamate synthase, NADH/NADPH, small subunit 3 494 6.9E-231 T 14-10-2018 IPR006005 Glutamate synthase, NADH/NADPH, small subunit 1 GO:0006537|GO:0016639|GO:0055114 DB29_04331 f05530c25c85d11d81e653d89cc5dc84 494 SUPERFAMILY SSF51971 152 421 6.71E-61 T 14-10-2018 DB29_04331 f05530c25c85d11d81e653d89cc5dc84 494 PRINTS PR00419 Adrenodoxin reductase family signature 155 177 8.2E-23 T 14-10-2018 DB29_04331 f05530c25c85d11d81e653d89cc5dc84 494 PRINTS PR00419 Adrenodoxin reductase family signature 178 191 8.2E-23 T 14-10-2018 DB29_04331 f05530c25c85d11d81e653d89cc5dc84 494 PRINTS PR00419 Adrenodoxin reductase family signature 296 310 8.2E-23 T 14-10-2018 DB29_04331 f05530c25c85d11d81e653d89cc5dc84 494 PRINTS PR00419 Adrenodoxin reductase family signature 220 230 8.2E-23 T 14-10-2018 DB29_04331 f05530c25c85d11d81e653d89cc5dc84 494 SUPERFAMILY SSF46548 2 164 3.35E-34 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 DB29_04331 f05530c25c85d11d81e653d89cc5dc84 494 Gene3D G3DSA:3.50.50.60 292 494 4.9E-16 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB29_04331 f05530c25c85d11d81e653d89cc5dc84 494 Gene3D G3DSA:3.50.50.60 154 291 1.9E-33 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB29_04331 f05530c25c85d11d81e653d89cc5dc84 494 SUPERFAMILY SSF51905 377 489 7.9E-9 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB29_03057 bd94703498eeb0c9a078cb493347949b 506 Pfam PF07690 Major Facilitator Superfamily 14 405 9.0E-56 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DB29_03057 bd94703498eeb0c9a078cb493347949b 506 PRINTS PR01036 Tetracycline resistance protein TetB signature 133 157 6.4E-7 T 14-10-2018 DB29_03057 bd94703498eeb0c9a078cb493347949b 506 PRINTS PR01036 Tetracycline resistance protein TetB signature 298 322 6.4E-7 T 14-10-2018 DB29_03057 bd94703498eeb0c9a078cb493347949b 506 PRINTS PR01036 Tetracycline resistance protein TetB signature 72 94 6.4E-7 T 14-10-2018 DB29_03057 bd94703498eeb0c9a078cb493347949b 506 PRINTS PR01036 Tetracycline resistance protein TetB signature 396 415 6.4E-7 T 14-10-2018 DB29_03057 bd94703498eeb0c9a078cb493347949b 506 Gene3D G3DSA:1.20.1720.10 12 220 9.1E-59 T 14-10-2018 DB29_03057 bd94703498eeb0c9a078cb493347949b 506 SUPERFAMILY SSF103473 9 489 3.14E-71 T 14-10-2018 IPR036259 MFS transporter superfamily DB29_03057 bd94703498eeb0c9a078cb493347949b 506 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 10 428 1.4E-82 T 14-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 DB29_04251 143816e30f0db51e86a78a88ba49ed03 284 Gene3D G3DSA:3.40.80.10 30 162 7.1E-29 T 14-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 DB29_04251 143816e30f0db51e86a78a88ba49ed03 284 SUPERFAMILY SSF54106 173 217 4.45E-8 T 14-10-2018 DB29_04251 143816e30f0db51e86a78a88ba49ed03 284 SMART SM00701 15 140 6.8E-5 T 14-10-2018 IPR006619 Peptidoglycan recognition protein family domain, metazoa/bacteria GO:0008270|GO:0008745|GO:0009253 Reactome: R-HSA-6803157 DB29_04251 143816e30f0db51e86a78a88ba49ed03 284 Pfam PF01476 LysM domain 174 216 1.7E-10 T 14-10-2018 IPR018392 LysM domain DB29_04251 143816e30f0db51e86a78a88ba49ed03 284 SUPERFAMILY SSF55846 34 158 7.72E-27 T 14-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 DB29_04251 143816e30f0db51e86a78a88ba49ed03 284 Gene3D G3DSA:3.10.350.10 172 218 3.8E-16 T 14-10-2018 IPR036779 LysM domain superfamily DB29_04251 143816e30f0db51e86a78a88ba49ed03 284 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 34 148 8.8E-17 T 14-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 DB29_04251 143816e30f0db51e86a78a88ba49ed03 284 SMART SM00257 173 218 4.0E-10 T 14-10-2018 IPR018392 LysM domain DB29_04251 143816e30f0db51e86a78a88ba49ed03 284 SMART SM00644 22 149 6.7E-8 T 14-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 DB29_02615 80e62ecd0750a3a8b4b77baa96a89940 301 PIRSF PIRSF001365 1 300 2.3E-71 T 14-10-2018 IPR002220 DapA-like GO:0016829 DB29_02615 80e62ecd0750a3a8b4b77baa96a89940 301 SUPERFAMILY SSF51569 3 293 6.8E-83 T 14-10-2018 DB29_02615 80e62ecd0750a3a8b4b77baa96a89940 301 SMART SM01130 3 294 9.7E-94 T 14-10-2018 IPR002220 DapA-like GO:0016829 DB29_02615 80e62ecd0750a3a8b4b77baa96a89940 301 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 137 168 - T 14-10-2018 IPR020625 Schiff base-forming aldolase, active site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 DB29_02615 80e62ecd0750a3a8b4b77baa96a89940 301 Gene3D G3DSA:3.20.20.70 1 295 9.9E-90 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DB29_02615 80e62ecd0750a3a8b4b77baa96a89940 301 Pfam PF00701 Dihydrodipicolinate synthetase family 5 292 8.2E-63 T 14-10-2018 IPR002220 DapA-like GO:0016829 DB29_02615 80e62ecd0750a3a8b4b77baa96a89940 301 PRINTS PR00146 Dihydrodipicolinate synthase signature 37 58 6.2E-12 T 14-10-2018 IPR002220 DapA-like GO:0016829 DB29_02615 80e62ecd0750a3a8b4b77baa96a89940 301 PRINTS PR00146 Dihydrodipicolinate synthase signature 73 91 6.2E-12 T 14-10-2018 IPR002220 DapA-like GO:0016829 DB29_02615 80e62ecd0750a3a8b4b77baa96a89940 301 PRINTS PR00146 Dihydrodipicolinate synthase signature 132 149 6.2E-12 T 14-10-2018 IPR002220 DapA-like GO:0016829 DB29_02892 e11a06dcbcc9a566b2ad13c983b8adf9 234 Gene3D G3DSA:1.20.1080.10 1 234 1.3E-79 T 14-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 DB29_02892 e11a06dcbcc9a566b2ad13c983b8adf9 234 TIGRFAM TIGR00861 MIP: MIP family channel proteins 6 230 1.4E-64 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 DB29_02892 e11a06dcbcc9a566b2ad13c983b8adf9 234 PRINTS PR02019 Aquaporin-7 signature 222 233 1.1E-6 T 14-10-2018 DB29_02892 e11a06dcbcc9a566b2ad13c983b8adf9 234 PRINTS PR02019 Aquaporin-7 signature 49 58 1.1E-6 T 14-10-2018 DB29_02892 e11a06dcbcc9a566b2ad13c983b8adf9 234 PRINTS PR02019 Aquaporin-7 signature 37 49 1.1E-6 T 14-10-2018 DB29_02892 e11a06dcbcc9a566b2ad13c983b8adf9 234 PRINTS PR02019 Aquaporin-7 signature 81 90 1.1E-6 T 14-10-2018 DB29_02892 e11a06dcbcc9a566b2ad13c983b8adf9 234 Pfam PF00230 Major intrinsic protein 3 230 3.2E-50 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 DB29_02892 e11a06dcbcc9a566b2ad13c983b8adf9 234 PRINTS PR00783 Major intrinsic protein family signature 2 21 2.2E-48 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 DB29_02892 e11a06dcbcc9a566b2ad13c983b8adf9 234 PRINTS PR00783 Major intrinsic protein family signature 213 233 2.2E-48 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 DB29_02892 e11a06dcbcc9a566b2ad13c983b8adf9 234 PRINTS PR00783 Major intrinsic protein family signature 44 68 2.2E-48 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 DB29_02892 e11a06dcbcc9a566b2ad13c983b8adf9 234 PRINTS PR00783 Major intrinsic protein family signature 81 100 2.2E-48 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 DB29_02892 e11a06dcbcc9a566b2ad13c983b8adf9 234 PRINTS PR00783 Major intrinsic protein family signature 136 154 2.2E-48 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 DB29_02892 e11a06dcbcc9a566b2ad13c983b8adf9 234 PRINTS PR00783 Major intrinsic protein family signature 166 188 2.2E-48 T 14-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 DB29_02892 e11a06dcbcc9a566b2ad13c983b8adf9 234 SUPERFAMILY SSF81338 3 234 9.94E-72 T 14-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 DB29_02892 e11a06dcbcc9a566b2ad13c983b8adf9 234 ProSitePatterns PS00221 MIP family signature. 62 70 - T 14-10-2018 IPR022357 Major intrinsic protein, conserved site Reactome: R-HSA-432047 DB29_03107 0a093ccbcb0f369a67d538cd280f154e 215 Gene3D G3DSA:1.10.10.10 2 85 4.1E-13 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_03107 0a093ccbcb0f369a67d538cd280f154e 215 SUPERFAMILY SSF46785 6 186 7.7E-31 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_03107 0a093ccbcb0f369a67d538cd280f154e 215 Pfam PF13412 Winged helix-turn-helix DNA-binding 6 50 5.5E-8 T 14-10-2018 DB29_03283 6710ac005643893ec6c089b420409b32 306 Pfam PF00701 Dihydrodipicolinate synthetase family 11 296 6.9E-46 T 14-10-2018 IPR002220 DapA-like GO:0016829 DB29_03283 6710ac005643893ec6c089b420409b32 306 Gene3D G3DSA:3.20.20.70 1 306 1.5E-115 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DB29_03283 6710ac005643893ec6c089b420409b32 306 SUPERFAMILY SSF51569 13 301 2.2E-63 T 14-10-2018 DB29_03283 6710ac005643893ec6c089b420409b32 306 SMART SM01130 9 299 5.1E-58 T 14-10-2018 IPR002220 DapA-like GO:0016829 DB29_03283 6710ac005643893ec6c089b420409b32 306 PIRSF PIRSF001365 6 305 1.1E-62 T 14-10-2018 IPR002220 DapA-like GO:0016829 DB29_01797 70a8598ac0f7b26e558ae23e24478c12 166 Pfam PF01022 Bacterial regulatory protein, arsR family 88 134 1.9E-12 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DB29_01797 70a8598ac0f7b26e558ae23e24478c12 166 Gene3D G3DSA:1.10.10.10 48 164 6.7E-36 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_01797 70a8598ac0f7b26e558ae23e24478c12 166 ProSitePatterns PS00846 Bacterial regulatory proteins, arsR family signature. 105 123 - T 14-10-2018 IPR018334 ArsR-type transcription regulator, HTH motif GO:0003700|GO:0005622|GO:0006355 DB29_01797 70a8598ac0f7b26e558ae23e24478c12 166 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 83 98 3.4E-23 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DB29_01797 70a8598ac0f7b26e558ae23e24478c12 166 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 103 114 3.4E-23 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DB29_01797 70a8598ac0f7b26e558ae23e24478c12 166 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 116 131 3.4E-23 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DB29_01797 70a8598ac0f7b26e558ae23e24478c12 166 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 131 146 3.4E-23 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DB29_01797 70a8598ac0f7b26e558ae23e24478c12 166 SUPERFAMILY SSF46785 70 158 1.61E-25 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_01797 70a8598ac0f7b26e558ae23e24478c12 166 SMART SM00418 81 160 2.9E-31 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DB29_03923 4fed0301b9971a2fcc9be3c31d03ac77 261 PIRSF PIRSF000770 162 261 3.6E-13 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DB29_03923 4fed0301b9971a2fcc9be3c31d03ac77 261 PIRSF PIRSF000770 12 122 3.3E-19 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DB29_03923 4fed0301b9971a2fcc9be3c31d03ac77 261 PIRSF PIRSF000770 115 159 1.7 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DB29_03923 4fed0301b9971a2fcc9be3c31d03ac77 261 Gene3D G3DSA:1.10.10.10 188 261 8.8E-11 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_03923 4fed0301b9971a2fcc9be3c31d03ac77 261 Pfam PF04542 Sigma-70 region 2 42 110 7.0E-18 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 DB29_03923 4fed0301b9971a2fcc9be3c31d03ac77 261 PRINTS PR00046 Major sigma-70 factor signature 212 224 2.7E-12 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DB29_03923 4fed0301b9971a2fcc9be3c31d03ac77 261 PRINTS PR00046 Major sigma-70 factor signature 90 98 2.7E-12 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DB29_03923 4fed0301b9971a2fcc9be3c31d03ac77 261 PRINTS PR00046 Major sigma-70 factor signature 66 79 2.7E-12 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DB29_03923 4fed0301b9971a2fcc9be3c31d03ac77 261 PRINTS PR00046 Major sigma-70 factor signature 229 244 2.7E-12 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DB29_03923 4fed0301b9971a2fcc9be3c31d03ac77 261 PRINTS PR00046 Major sigma-70 factor signature 244 255 2.7E-12 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DB29_03923 4fed0301b9971a2fcc9be3c31d03ac77 261 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 229 255 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DB29_03923 4fed0301b9971a2fcc9be3c31d03ac77 261 SUPERFAMILY SSF88659 114 192 1.0E-13 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like DB29_03923 4fed0301b9971a2fcc9be3c31d03ac77 261 SUPERFAMILY SSF88946 6 110 2.35E-33 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 DB29_03923 4fed0301b9971a2fcc9be3c31d03ac77 261 TIGRFAM TIGR02980 SigBFG: RNA polymerase sigma-70 factor, sigma-B/F/G subfamily 37 259 7.1E-82 T 14-10-2018 IPR014322 RNA polymerase sigma-B/F/G type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DB29_03923 4fed0301b9971a2fcc9be3c31d03ac77 261 Gene3D G3DSA:1.20.120.1810 4 110 8.3E-27 T 14-10-2018 DB29_03923 4fed0301b9971a2fcc9be3c31d03ac77 261 Pfam PF04545 Sigma-70, region 4 208 255 2.6E-13 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 DB29_03923 4fed0301b9971a2fcc9be3c31d03ac77 261 Gene3D G3DSA:1.10.10.10 111 166 7.8E-12 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_03923 4fed0301b9971a2fcc9be3c31d03ac77 261 SUPERFAMILY SSF88659 177 260 1.08E-16 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like DB29_03923 4fed0301b9971a2fcc9be3c31d03ac77 261 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 66 79 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DB29_03923 4fed0301b9971a2fcc9be3c31d03ac77 261 TIGRFAM TIGR02850 spore_sigG: RNA polymerase sigma-G factor 4 259 1.0E-151 T 14-10-2018 IPR014212 RNA polymerase sigma-G type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DB29_03923 4fed0301b9971a2fcc9be3c31d03ac77 261 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 38 258 9.4E-35 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 DB29_03923 4fed0301b9971a2fcc9be3c31d03ac77 261 Pfam PF04539 Sigma-70 region 3 135 176 7.2E-6 T 14-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 DB29_03310 23498e1475a694c548ae413f873a774a 594 Gene3D G3DSA:2.40.110.10 146 251 4.2E-34 T 14-10-2018 DB29_03310 23498e1475a694c548ae413f873a774a 594 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 147 240 2.4E-22 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 DB29_03310 23498e1475a694c548ae413f873a774a 594 SUPERFAMILY SSF56645 29 263 2.09E-74 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 DB29_03310 23498e1475a694c548ae413f873a774a 594 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 31 143 6.9E-32 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 DB29_03310 23498e1475a694c548ae413f873a774a 594 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 149 161 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 DB29_03310 23498e1475a694c548ae413f873a774a 594 Gene3D G3DSA:1.20.140.10 252 422 4.9E-51 T 14-10-2018 DB29_03310 23498e1475a694c548ae413f873a774a 594 Gene3D G3DSA:1.10.540.10 2 144 3.3E-44 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 DB29_03310 23498e1475a694c548ae413f873a774a 594 Gene3D G3DSA:1.20.140.10 423 594 9.0E-55 T 14-10-2018 DB29_03310 23498e1475a694c548ae413f873a774a 594 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 252 415 4.3E-35 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 DB29_03310 23498e1475a694c548ae413f873a774a 594 SUPERFAMILY SSF47203 257 422 1.21E-43 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 DB29_03310 23498e1475a694c548ae413f873a774a 594 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 378 397 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 DB29_04271 c419ce0b588a49f935f41e2b44f66328 245 Pfam PF01380 SIS domain 112 211 3.6E-15 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 DB29_04271 c419ce0b588a49f935f41e2b44f66328 245 Gene3D G3DSA:3.40.50.10490 86 245 1.3E-33 T 14-10-2018 DB29_04271 c419ce0b588a49f935f41e2b44f66328 245 Gene3D G3DSA:1.10.10.10 1 73 2.7E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_04271 c419ce0b588a49f935f41e2b44f66328 245 Pfam PF01418 Helix-turn-helix domain, rpiR family 4 71 7.5E-16 T 14-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 DB29_04271 c419ce0b588a49f935f41e2b44f66328 245 SUPERFAMILY SSF46689 4 74 1.42E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DB29_04271 c419ce0b588a49f935f41e2b44f66328 245 SUPERFAMILY SSF53697 89 243 1.71E-28 T 14-10-2018 DB29_01151 1dbb8709bf58e67cfec6085d9d7416eb 619 SUPERFAMILY SSF63520 291 387 5.89E-17 T 14-10-2018 IPR036634 PRD domain superfamily GO:0006355 DB29_01151 1dbb8709bf58e67cfec6085d9d7416eb 619 Gene3D G3DSA:1.10.1790.10 290 390 8.2E-13 T 14-10-2018 DB29_01151 1dbb8709bf58e67cfec6085d9d7416eb 619 SUPERFAMILY SSF55804 487 618 9.94E-15 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 DB29_01151 1dbb8709bf58e67cfec6085d9d7416eb 619 Gene3D G3DSA:3.40.930.10 489 618 9.0E-10 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 DB29_01151 1dbb8709bf58e67cfec6085d9d7416eb 619 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 500 615 1.0E-9 T 14-10-2018 IPR002178 PTS EIIA type-2 domain DB29_01151 1dbb8709bf58e67cfec6085d9d7416eb 619 SUPERFAMILY SSF46785 4 62 1.31E-5 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_01151 1dbb8709bf58e67cfec6085d9d7416eb 619 Pfam PF00874 PRD domain 299 387 1.7E-12 T 14-10-2018 IPR011608 PRD domain GO:0006355 DB29_01151 1dbb8709bf58e67cfec6085d9d7416eb 619 Pfam PF13412 Winged helix-turn-helix DNA-binding 86 124 3.6E-5 T 14-10-2018 DB29_01151 1dbb8709bf58e67cfec6085d9d7416eb 619 SUPERFAMILY SSF63520 184 280 3.01E-6 T 14-10-2018 IPR036634 PRD domain superfamily GO:0006355 DB29_01151 1dbb8709bf58e67cfec6085d9d7416eb 619 Pfam PF08279 HTH domain 5 60 1.9E-13 T 14-10-2018 IPR013196 Helix-turn-helix, type 11 DB29_01151 1dbb8709bf58e67cfec6085d9d7416eb 619 Gene3D G3DSA:1.10.10.10 1 62 9.5E-14 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_01118 1c9ea84c4aaeb9fcf82a0bca5a65b7ac 545 ProSitePatterns PS00296 Chaperonins cpn60 signature. 403 414 - T 14-10-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 DB29_01118 1c9ea84c4aaeb9fcf82a0bca5a65b7ac 545 Pfam PF00118 TCP-1/cpn60 chaperonin family 22 522 4.4E-104 T 14-10-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 DB29_01118 1c9ea84c4aaeb9fcf82a0bca5a65b7ac 545 Gene3D G3DSA:1.10.560.10 7 518 6.5E-235 T 14-10-2018 IPR027413 GroEL-like equatorial domain superfamily DB29_01118 1c9ea84c4aaeb9fcf82a0bca5a65b7ac 545 TIGRFAM TIGR02348 GroEL: chaperonin GroL 2 524 1.6E-257 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 DB29_01118 1c9ea84c4aaeb9fcf82a0bca5a65b7ac 545 SUPERFAMILY SSF48592 6 518 2.29E-80 T 14-10-2018 IPR027413 GroEL-like equatorial domain superfamily DB29_01118 1c9ea84c4aaeb9fcf82a0bca5a65b7ac 545 SUPERFAMILY SSF54849 136 203 1.92E-26 T 14-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily DB29_01118 1c9ea84c4aaeb9fcf82a0bca5a65b7ac 545 PRINTS PR00298 60kDa chaperonin signature 348 373 1.9E-73 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 DB29_01118 1c9ea84c4aaeb9fcf82a0bca5a65b7ac 545 PRINTS PR00298 60kDa chaperonin signature 396 417 1.9E-73 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 DB29_01118 1c9ea84c4aaeb9fcf82a0bca5a65b7ac 545 PRINTS PR00298 60kDa chaperonin signature 26 52 1.9E-73 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 DB29_01118 1c9ea84c4aaeb9fcf82a0bca5a65b7ac 545 PRINTS PR00298 60kDa chaperonin signature 82 109 1.9E-73 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 DB29_01118 1c9ea84c4aaeb9fcf82a0bca5a65b7ac 545 PRINTS PR00298 60kDa chaperonin signature 266 289 1.9E-73 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 DB29_01118 1c9ea84c4aaeb9fcf82a0bca5a65b7ac 545 Gene3D G3DSA:3.30.260.10 135 408 6.5E-235 T 14-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily DB29_01118 1c9ea84c4aaeb9fcf82a0bca5a65b7ac 545 SUPERFAMILY SSF52029 183 374 3.89E-84 T 14-10-2018 IPR027409 GroEL-like apical domain superfamily DB29_01118 1c9ea84c4aaeb9fcf82a0bca5a65b7ac 545 Hamap MF_00600 60 kDa chaperonin [groL]. 1 541 42.478 T 14-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 DB29_01118 1c9ea84c4aaeb9fcf82a0bca5a65b7ac 545 Gene3D G3DSA:3.50.7.10 190 370 6.5E-235 T 14-10-2018 IPR027409 GroEL-like apical domain superfamily DB29_02695 920f3ebe8bc8f48a7f44857852f7cc82 448 PRINTS PR01950 LanC-like protein superfamily signature 415 432 2.6E-23 T 14-10-2018 IPR007822 Lanthionine synthetase C-like DB29_02695 920f3ebe8bc8f48a7f44857852f7cc82 448 PRINTS PR01950 LanC-like protein superfamily signature 52 70 2.6E-23 T 14-10-2018 IPR007822 Lanthionine synthetase C-like DB29_02695 920f3ebe8bc8f48a7f44857852f7cc82 448 PRINTS PR01950 LanC-like protein superfamily signature 303 323 2.6E-23 T 14-10-2018 IPR007822 Lanthionine synthetase C-like DB29_02695 920f3ebe8bc8f48a7f44857852f7cc82 448 PRINTS PR01950 LanC-like protein superfamily signature 231 247 2.6E-23 T 14-10-2018 IPR007822 Lanthionine synthetase C-like DB29_02695 920f3ebe8bc8f48a7f44857852f7cc82 448 PRINTS PR01950 LanC-like protein superfamily signature 353 366 2.6E-23 T 14-10-2018 IPR007822 Lanthionine synthetase C-like DB29_02695 920f3ebe8bc8f48a7f44857852f7cc82 448 PRINTS PR01950 LanC-like protein superfamily signature 158 173 2.6E-23 T 14-10-2018 IPR007822 Lanthionine synthetase C-like DB29_02695 920f3ebe8bc8f48a7f44857852f7cc82 448 PRINTS PR01955 Frankia sp. LanC-like protein signature 252 272 2.9E-39 T 14-10-2018 DB29_02695 920f3ebe8bc8f48a7f44857852f7cc82 448 PRINTS PR01955 Frankia sp. LanC-like protein signature 416 433 2.9E-39 T 14-10-2018 DB29_02695 920f3ebe8bc8f48a7f44857852f7cc82 448 PRINTS PR01955 Frankia sp. LanC-like protein signature 303 326 2.9E-39 T 14-10-2018 DB29_02695 920f3ebe8bc8f48a7f44857852f7cc82 448 PRINTS PR01955 Frankia sp. LanC-like protein signature 53 68 2.9E-39 T 14-10-2018 DB29_02695 920f3ebe8bc8f48a7f44857852f7cc82 448 PRINTS PR01955 Frankia sp. LanC-like protein signature 228 252 2.9E-39 T 14-10-2018 DB29_02695 920f3ebe8bc8f48a7f44857852f7cc82 448 PRINTS PR01955 Frankia sp. LanC-like protein signature 157 173 2.9E-39 T 14-10-2018 DB29_02695 920f3ebe8bc8f48a7f44857852f7cc82 448 PRINTS PR01955 Frankia sp. LanC-like protein signature 100 116 2.9E-39 T 14-10-2018 DB29_02695 920f3ebe8bc8f48a7f44857852f7cc82 448 Pfam PF05147 Lanthionine synthetase C-like protein 49 446 3.4E-90 T 14-10-2018 IPR007822 Lanthionine synthetase C-like DB29_02695 920f3ebe8bc8f48a7f44857852f7cc82 448 SUPERFAMILY SSF158745 29 448 3.92E-85 T 14-10-2018 DB29_02695 920f3ebe8bc8f48a7f44857852f7cc82 448 SMART SM01260 49 446 7.0E-84 T 14-10-2018 IPR007822 Lanthionine synthetase C-like DB29_02695 920f3ebe8bc8f48a7f44857852f7cc82 448 Gene3D G3DSA:1.50.10.20 24 448 1.2E-118 T 14-10-2018 DB29_03264 6333b7d935197f04944489b84834ebe1 85 Pfam PF00381 PTS HPr component phosphorylation site 3 82 9.5E-31 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like DB29_03264 6333b7d935197f04944489b84834ebe1 85 Gene3D G3DSA:3.30.1340.10 1 84 5.1E-34 T 14-10-2018 IPR035895 HPr-like superfamily DB29_03264 6333b7d935197f04944489b84834ebe1 85 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 81 4.3E-30 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like DB29_03264 6333b7d935197f04944489b84834ebe1 85 PRINTS PR00107 Phosphocarrier protein signature 38 53 2.6E-18 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like DB29_03264 6333b7d935197f04944489b84834ebe1 85 PRINTS PR00107 Phosphocarrier protein signature 13 29 2.6E-18 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like DB29_03264 6333b7d935197f04944489b84834ebe1 85 PRINTS PR00107 Phosphocarrier protein signature 53 70 2.6E-18 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like DB29_03264 6333b7d935197f04944489b84834ebe1 85 SUPERFAMILY SSF55594 3 84 1.2E-28 T 14-10-2018 IPR035895 HPr-like superfamily DB29_03117 4d1936135dccfa829534b67d8f3f1eaa 321 Gene3D G3DSA:3.40.50.720 1 140 9.7E-39 T 14-10-2018 DB29_03117 4d1936135dccfa829534b67d8f3f1eaa 321 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 4 119 1.1E-23 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 DB29_03117 4d1936135dccfa829534b67d8f3f1eaa 321 Gene3D G3DSA:3.30.360.10 141 321 3.0E-43 T 14-10-2018 DB29_03117 4d1936135dccfa829534b67d8f3f1eaa 321 SUPERFAMILY SSF51735 3 152 6.23E-46 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_03117 4d1936135dccfa829534b67d8f3f1eaa 321 SUPERFAMILY SSF55347 127 290 1.64E-35 T 14-10-2018 DB29_03251 2d460130516192f8d60f7e4af885efa0 240 Gene3D G3DSA:3.20.20.70 4 239 9.1E-89 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DB29_03251 2d460130516192f8d60f7e4af885efa0 240 SUPERFAMILY SSF51366 4 235 1.48E-69 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 DB29_03251 2d460130516192f8d60f7e4af885efa0 240 Pfam PF00977 Histidine biosynthesis protein 5 230 8.7E-78 T 14-10-2018 IPR006062 Histidine biosynthesis GO:0000105 DB29_03251 2d460130516192f8d60f7e4af885efa0 240 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 5 234 1.3E-85 T 14-10-2018 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 DB29_03251 2d460130516192f8d60f7e4af885efa0 240 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 4 237 35.848 T 14-10-2018 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 DB29_00331 002e2da97094f4ad31a5b66cf71e251b 97 Pfam PF07873 YabP family 27 90 1.5E-17 T 14-10-2018 IPR022476 Sporulation protein YabP/YqfC DB29_00331 002e2da97094f4ad31a5b66cf71e251b 97 TIGRFAM TIGR02856 spore_yqfC: sporulation protein YqfC 8 91 4.8E-33 T 14-10-2018 IPR022477 Sporulation protein YqfC DB29_00540 2f2aadebf8f570898738eeaddfc957bf 486 PRINTS PR00145 Argininosuccinate lyase family signature 181 197 7.9E-36 T 14-10-2018 DB29_00540 2f2aadebf8f570898738eeaddfc957bf 486 PRINTS PR00145 Argininosuccinate lyase family signature 219 243 7.9E-36 T 14-10-2018 DB29_00540 2f2aadebf8f570898738eeaddfc957bf 486 PRINTS PR00145 Argininosuccinate lyase family signature 263 279 7.9E-36 T 14-10-2018 DB29_00540 2f2aadebf8f570898738eeaddfc957bf 486 PRINTS PR00145 Argininosuccinate lyase family signature 130 150 7.9E-36 T 14-10-2018 DB29_00540 2f2aadebf8f570898738eeaddfc957bf 486 PRINTS PR00145 Argininosuccinate lyase family signature 89 111 7.9E-36 T 14-10-2018 DB29_00540 2f2aadebf8f570898738eeaddfc957bf 486 Gene3D G3DSA:1.20.200.10 107 446 3.4E-147 T 14-10-2018 DB29_00540 2f2aadebf8f570898738eeaddfc957bf 486 PRINTS PR00149 Fumarate lyase superfamily signature 219 246 2.2E-25 T 14-10-2018 IPR000362 Fumarate lyase family DB29_00540 2f2aadebf8f570898738eeaddfc957bf 486 PRINTS PR00149 Fumarate lyase superfamily signature 263 279 2.2E-25 T 14-10-2018 IPR000362 Fumarate lyase family DB29_00540 2f2aadebf8f570898738eeaddfc957bf 486 PRINTS PR00149 Fumarate lyase superfamily signature 135 153 2.2E-25 T 14-10-2018 IPR000362 Fumarate lyase family DB29_00540 2f2aadebf8f570898738eeaddfc957bf 486 PRINTS PR00149 Fumarate lyase superfamily signature 90 108 2.2E-25 T 14-10-2018 IPR000362 Fumarate lyase family DB29_00540 2f2aadebf8f570898738eeaddfc957bf 486 TIGRFAM TIGR00838 argH: argininosuccinate lyase 6 453 4.8E-125 T 14-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 DB29_00540 2f2aadebf8f570898738eeaddfc957bf 486 Pfam PF14698 Argininosuccinate lyase C-terminal 352 428 1.5E-14 T 14-10-2018 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 DB29_00540 2f2aadebf8f570898738eeaddfc957bf 486 Gene3D G3DSA:1.10.40.30 349 430 3.4E-147 T 14-10-2018 DB29_00540 2f2aadebf8f570898738eeaddfc957bf 486 Hamap MF_00006 Argininosuccinate lyase [argH]. 4 451 31.061 T 14-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 DB29_00540 2f2aadebf8f570898738eeaddfc957bf 486 Gene3D G3DSA:1.10.275.10 19 217 3.4E-147 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal DB29_00540 2f2aadebf8f570898738eeaddfc957bf 486 SUPERFAMILY SSF48557 15 453 2.36E-106 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 DB29_00540 2f2aadebf8f570898738eeaddfc957bf 486 Pfam PF00206 Lyase 35 288 1.5E-48 T 14-10-2018 IPR022761 Fumarate lyase, N-terminal DB29_01163 78f1118aeeefebbb14128918d29c2e42 409 Pfam PF07690 Major Facilitator Superfamily 34 349 4.9E-29 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DB29_01163 78f1118aeeefebbb14128918d29c2e42 409 Gene3D G3DSA:1.20.1250.20 4 390 3.5E-35 T 14-10-2018 DB29_01163 78f1118aeeefebbb14128918d29c2e42 409 SUPERFAMILY SSF103473 1 392 4.32E-44 T 14-10-2018 IPR036259 MFS transporter superfamily DB29_00673 d44e0c631906a2096f6c5f8d5c966d78 360 SUPERFAMILY SSF55811 227 355 2.54E-20 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 DB29_00673 d44e0c631906a2096f6c5f8d5c966d78 360 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 199 215 - T 14-10-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 DB29_00673 d44e0c631906a2096f6c5f8d5c966d78 360 Pfam PF00633 Helix-hairpin-helix motif 107 135 1.2E-9 T 14-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 DB29_00673 d44e0c631906a2096f6c5f8d5c966d78 360 Pfam PF14815 NUDIX domain 244 352 6.1E-23 T 14-10-2018 IPR029119 MutY, C-terminal Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 DB29_00673 d44e0c631906a2096f6c5f8d5c966d78 360 SMART SM00478 46 197 1.7E-55 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 DB29_00673 d44e0c631906a2096f6c5f8d5c966d78 360 SUPERFAMILY SSF48150 13 229 5.65E-75 T 14-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 DB29_00673 d44e0c631906a2096f6c5f8d5c966d78 360 SMART SM00525 198 218 0.0063 T 14-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 DB29_00673 d44e0c631906a2096f6c5f8d5c966d78 360 Gene3D G3DSA:1.10.340.30 28 139 1.2E-90 T 14-10-2018 DB29_00673 d44e0c631906a2096f6c5f8d5c966d78 360 Gene3D G3DSA:3.90.79.10 236 357 4.7E-20 T 14-10-2018 DB29_00673 d44e0c631906a2096f6c5f8d5c966d78 360 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 42 171 3.6E-20 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 DB29_00673 d44e0c631906a2096f6c5f8d5c966d78 360 Gene3D G3DSA:1.10.1670.10 17 220 1.2E-90 T 14-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 DB29_00673 d44e0c631906a2096f6c5f8d5c966d78 360 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 14 274 6.0E-106 T 14-10-2018 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 DB29_03314 deae4c12c279eb73486c5a0287856d4b 342 SMART SM00930 263 338 1.1E-24 T 14-10-2018 IPR018449 NIL domain DB29_03314 deae4c12c279eb73486c5a0287856d4b 342 Pfam PF00005 ABC transporter 21 169 3.2E-37 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB29_03314 deae4c12c279eb73486c5a0287856d4b 342 SMART SM00382 30 339 2.0E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_03314 deae4c12c279eb73486c5a0287856d4b 342 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB29_03314 deae4c12c279eb73486c5a0287856d4b 342 Gene3D G3DSA:3.40.50.300 1 246 7.2E-77 T 14-10-2018 DB29_03314 deae4c12c279eb73486c5a0287856d4b 342 SUPERFAMILY SSF52540 1 240 1.08E-83 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_03314 deae4c12c279eb73486c5a0287856d4b 342 SUPERFAMILY SSF55021 250 340 8.7E-20 T 14-10-2018 DB29_03314 deae4c12c279eb73486c5a0287856d4b 342 Pfam PF09383 NIL domain 265 337 7.3E-19 T 14-10-2018 IPR018449 NIL domain DB29_03314 deae4c12c279eb73486c5a0287856d4b 342 Gene3D G3DSA:3.30.70.260 247 341 4.9E-23 T 14-10-2018 DB29_00351 8c5a9b0c61304c43cce7546672ad02b7 388 SUPERFAMILY SSF102114 3 378 3.53E-118 T 14-10-2018 DB29_00351 8c5a9b0c61304c43cce7546672ad02b7 388 Gene3D G3DSA:3.80.30.20 2 301 1.2E-103 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe DB29_00351 8c5a9b0c61304c43cce7546672ad02b7 388 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 4 366 7.2E-109 T 14-10-2018 IPR004559 Oxygen-independent coproporphyrinogen III oxidase-like GO:0004109|GO:0005737|GO:0006779|GO:0055114 DB29_00351 8c5a9b0c61304c43cce7546672ad02b7 388 Pfam PF06969 HemN C-terminal domain 302 366 6.2E-13 T 14-10-2018 IPR010723 HemN, C-terminal DB29_00351 8c5a9b0c61304c43cce7546672ad02b7 388 SMART SM00729 2 222 5.8E-63 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 DB29_00351 8c5a9b0c61304c43cce7546672ad02b7 388 Pfam PF04055 Radical SAM superfamily 7 176 1.3E-23 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 DB29_03409 ed54dc3f6f8bc19171801dab74d3acb3 465 PRINTS PR00173 Glutamate-aspartate symporter signature 106 131 1.1E-16 T 14-10-2018 DB29_03409 ed54dc3f6f8bc19171801dab74d3acb3 465 PRINTS PR00173 Glutamate-aspartate symporter signature 182 204 1.1E-16 T 14-10-2018 DB29_03409 ed54dc3f6f8bc19171801dab74d3acb3 465 PRINTS PR00173 Glutamate-aspartate symporter signature 396 416 1.1E-16 T 14-10-2018 DB29_03409 ed54dc3f6f8bc19171801dab74d3acb3 465 PRINTS PR00173 Glutamate-aspartate symporter signature 369 388 1.1E-16 T 14-10-2018 DB29_03409 ed54dc3f6f8bc19171801dab74d3acb3 465 PRINTS PR00173 Glutamate-aspartate symporter signature 76 96 1.1E-16 T 14-10-2018 DB29_03409 ed54dc3f6f8bc19171801dab74d3acb3 465 PRINTS PR00173 Glutamate-aspartate symporter signature 28 48 1.1E-16 T 14-10-2018 DB29_03409 ed54dc3f6f8bc19171801dab74d3acb3 465 Pfam PF00375 Sodium:dicarboxylate symporter family 31 441 7.0E-97 T 14-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 DB29_03409 ed54dc3f6f8bc19171801dab74d3acb3 465 Gene3D G3DSA:1.10.3860.10 5 460 2.1E-98 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 DB29_03409 ed54dc3f6f8bc19171801dab74d3acb3 465 SUPERFAMILY SSF118215 30 441 1.03E-89 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 DB29_00090 e5149f1d41b6b861067d226110ea6bbc 121 ProDom PD031888 MUTASE CHORISMATE AROH THE CLASS ISOMERASE TRANSCRIPTION BIOSYNTHESIS CM 3D-STRUCTURE 8 118 5.0E-60 T 14-10-2018 IPR008243 Chorismate mutase, AroH class KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 DB29_00090 e5149f1d41b6b861067d226110ea6bbc 121 PIRSF PIRSF005965 1 121 1.1E-51 T 14-10-2018 IPR008243 Chorismate mutase, AroH class KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 DB29_00090 e5149f1d41b6b861067d226110ea6bbc 121 TIGRFAM TIGR01796 CM_mono_aroH: chorismate mutase 2 118 5.5E-47 T 14-10-2018 IPR008243 Chorismate mutase, AroH class KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 DB29_00090 e5149f1d41b6b861067d226110ea6bbc 121 Pfam PF07736 Chorismate mutase type I 2 118 4.7E-48 T 14-10-2018 IPR008243 Chorismate mutase, AroH class KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 DB29_00090 e5149f1d41b6b861067d226110ea6bbc 121 SUPERFAMILY SSF55298 1 120 1.18E-48 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 DB29_00090 e5149f1d41b6b861067d226110ea6bbc 121 Gene3D G3DSA:3.30.1330.40 1 121 4.2E-50 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 DB29_01416 5a473932e19fab00702abaed7bbd6397 372 Gene3D G3DSA:3.10.400.10 21 157 3.6E-43 T 14-10-2018 DB29_01416 5a473932e19fab00702abaed7bbd6397 372 TIGRFAM TIGR00339 sopT: sulfate adenylyltransferase 20 370 1.4E-132 T 14-10-2018 IPR002650 Sulphate adenylyltransferase GO:0000103|GO:0004781 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 DB29_01416 5a473932e19fab00702abaed7bbd6397 372 SUPERFAMILY SSF52374 159 371 6.88E-88 T 14-10-2018 DB29_01416 5a473932e19fab00702abaed7bbd6397 372 Pfam PF01747 ATP-sulfurylase 161 371 5.6E-95 T 14-10-2018 IPR024951 Sulphate adenylyltransferase catalytic domain GO:0004781 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 DB29_01416 5a473932e19fab00702abaed7bbd6397 372 Pfam PF14306 PUA-like domain 24 151 4.6E-44 T 14-10-2018 IPR025980 ATP-sulfurylase PUA-like domain KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 DB29_01416 5a473932e19fab00702abaed7bbd6397 372 SUPERFAMILY SSF88697 12 157 5.07E-45 T 14-10-2018 IPR015947 PUA-like superfamily DB29_01416 5a473932e19fab00702abaed7bbd6397 372 Hamap MF_00066 Sulfate adenylyltransferase [sat]. 19 372 49.413 T 14-10-2018 IPR020792 Sulphate adenylyltransferase, prokaryotic-type GO:0000103|GO:0004781 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 DB29_01416 5a473932e19fab00702abaed7bbd6397 372 Gene3D G3DSA:3.40.50.620 163 372 1.4E-98 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DB29_01628 cf00c7451ffc316e13f8d4c2df66a2ab 467 Pfam PF07690 Major Facilitator Superfamily 19 409 1.8E-47 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DB29_01628 cf00c7451ffc316e13f8d4c2df66a2ab 467 Gene3D G3DSA:1.20.1720.10 14 254 5.5E-40 T 14-10-2018 DB29_01628 cf00c7451ffc316e13f8d4c2df66a2ab 467 SUPERFAMILY SSF103473 4 463 1.03E-63 T 14-10-2018 IPR036259 MFS transporter superfamily DB29_01628 cf00c7451ffc316e13f8d4c2df66a2ab 467 PRINTS PR01036 Tetracycline resistance protein TetB signature 138 162 1.6E-10 T 14-10-2018 DB29_01628 cf00c7451ffc316e13f8d4c2df66a2ab 467 PRINTS PR01036 Tetracycline resistance protein TetB signature 17 41 1.6E-10 T 14-10-2018 DB29_01628 cf00c7451ffc316e13f8d4c2df66a2ab 467 PRINTS PR01036 Tetracycline resistance protein TetB signature 108 128 1.6E-10 T 14-10-2018 DB29_01628 cf00c7451ffc316e13f8d4c2df66a2ab 467 PRINTS PR01036 Tetracycline resistance protein TetB signature 302 326 1.6E-10 T 14-10-2018 DB29_01628 cf00c7451ffc316e13f8d4c2df66a2ab 467 Gene3D G3DSA:1.20.1250.20 259 467 9.3E-22 T 14-10-2018 DB29_01628 cf00c7451ffc316e13f8d4c2df66a2ab 467 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 14 418 4.0E-83 T 14-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 DB29_00631 71139897ef1b0974733e7a9c8508a30d 684 PIRSF PIRSF001084 1 683 6.3E-273 T 14-10-2018 IPR003476 Glycoside hydrolase, family 42 GO:0004565|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 DB29_00631 71139897ef1b0974733e7a9c8508a30d 684 Gene3D G3DSA:2.60.40.1180 621 682 6.0E-16 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta DB29_00631 71139897ef1b0974733e7a9c8508a30d 684 Gene3D G3DSA:3.20.20.80 1 399 1.2E-136 T 14-10-2018 DB29_00631 71139897ef1b0974733e7a9c8508a30d 684 Pfam PF08533 Beta-galactosidase C-terminal domain 623 681 3.3E-9 T 14-10-2018 IPR013739 Beta-galactosidase C-terminal GO:0004565|GO:0006012 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 DB29_00631 71139897ef1b0974733e7a9c8508a30d 684 SUPERFAMILY SSF52317 401 613 6.98E-64 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like DB29_00631 71139897ef1b0974733e7a9c8508a30d 684 Pfam PF02449 Beta-galactosidase 14 391 1.1E-153 T 14-10-2018 IPR013529 Glycoside hydrolase, family 42, N-terminal GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 DB29_00631 71139897ef1b0974733e7a9c8508a30d 684 SUPERFAMILY SSF51445 2 371 1.26E-118 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily DB29_00631 71139897ef1b0974733e7a9c8508a30d 684 Gene3D G3DSA:3.40.50.880 400 619 3.1E-71 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like DB29_00631 71139897ef1b0974733e7a9c8508a30d 684 Pfam PF08532 Beta-galactosidase trimerisation domain 403 611 9.3E-71 T 14-10-2018 IPR013738 Beta-galactosidase trimerisation GO:0004565|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 DB29_01423 378cb4044550e32f79d2449e20eea804 227 Pfam PF07729 FCD domain 90 209 1.0E-22 T 14-10-2018 IPR011711 GntR, C-terminal DB29_01423 378cb4044550e32f79d2449e20eea804 227 SMART SM00345 18 76 1.1E-17 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DB29_01423 378cb4044550e32f79d2449e20eea804 227 SUPERFAMILY SSF48008 86 210 8.11E-20 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DB29_01423 378cb4044550e32f79d2449e20eea804 227 SUPERFAMILY SSF46785 13 80 2.07E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_01423 378cb4044550e32f79d2449e20eea804 227 Pfam PF00392 Bacterial regulatory proteins, gntR family 15 76 2.2E-17 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DB29_01423 378cb4044550e32f79d2449e20eea804 227 Gene3D G3DSA:1.10.10.10 12 77 3.0E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_01423 378cb4044550e32f79d2449e20eea804 227 SMART SM00895 86 210 9.5E-13 T 14-10-2018 IPR011711 GntR, C-terminal DB29_01423 378cb4044550e32f79d2449e20eea804 227 Gene3D G3DSA:1.20.120.530 84 212 6.0E-21 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DB29_04214 a7937438e16d072ad19b45d8ca1d9fbe 261 SMART SM01040 14 99 2.3E-32 T 14-10-2018 IPR003497 BRO N-terminal domain DB29_04214 a7937438e16d072ad19b45d8ca1d9fbe 261 Pfam PF02498 BRO family, N-terminal domain 15 99 4.6E-24 T 14-10-2018 IPR003497 BRO N-terminal domain DB29_03987 6a0e780d8df9c0b99fe3287eb84efbd7 608 Gene3D G3DSA:3.40.50.620 104 490 4.3E-111 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DB29_03987 6a0e780d8df9c0b99fe3287eb84efbd7 608 Gene3D G3DSA:1.10.730.10 491 608 2.3E-26 T 14-10-2018 DB29_03987 6a0e780d8df9c0b99fe3287eb84efbd7 608 SMART SM00836 492 608 8.1E-29 T 14-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 DB29_03987 6a0e780d8df9c0b99fe3287eb84efbd7 608 SUPERFAMILY SSF47323 486 607 1.11E-25 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 DB29_03987 6a0e780d8df9c0b99fe3287eb84efbd7 608 SUPERFAMILY SSF52374 103 482 8.94E-60 T 14-10-2018 DB29_03987 6a0e780d8df9c0b99fe3287eb84efbd7 608 Pfam PF00750 tRNA synthetases class I (R) 356 477 1.9E-5 T 14-10-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 DB29_03987 6a0e780d8df9c0b99fe3287eb84efbd7 608 Pfam PF00750 tRNA synthetases class I (R) 92 319 8.2E-15 T 14-10-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 DB29_03987 6a0e780d8df9c0b99fe3287eb84efbd7 608 Gene3D G3DSA:3.30.1360.70 1 97 3.4E-21 T 14-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 DB29_03987 6a0e780d8df9c0b99fe3287eb84efbd7 608 PRINTS PR01038 Arginyl-tRNA synthetase signature 106 121 5.7E-20 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 DB29_03987 6a0e780d8df9c0b99fe3287eb84efbd7 608 PRINTS PR01038 Arginyl-tRNA synthetase signature 145 158 5.7E-20 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 DB29_03987 6a0e780d8df9c0b99fe3287eb84efbd7 608 PRINTS PR01038 Arginyl-tRNA synthetase signature 121 137 5.7E-20 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 DB29_03987 6a0e780d8df9c0b99fe3287eb84efbd7 608 PRINTS PR01038 Arginyl-tRNA synthetase signature 302 323 5.7E-20 T 14-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 DB29_03987 6a0e780d8df9c0b99fe3287eb84efbd7 608 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 3 86 1.9E-22 T 14-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 DB29_03987 6a0e780d8df9c0b99fe3287eb84efbd7 608 SUPERFAMILY SSF55190 3 89 1.31E-19 T 14-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 DB29_03987 6a0e780d8df9c0b99fe3287eb84efbd7 608 SMART SM01016 1 86 6.9E-30 T 14-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 DB29_03987 6a0e780d8df9c0b99fe3287eb84efbd7 608 Pfam PF05746 DALR anticodon binding domain 493 607 6.4E-23 T 14-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 DB29_02317 6a6034fae5874d75091e5bab37ef0bb7 216 SUPERFAMILY SSF51569 1 211 1.15E-78 T 14-10-2018 DB29_02317 6a6034fae5874d75091e5bab37ef0bb7 216 Gene3D G3DSA:3.20.20.70 1 216 4.7E-89 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DB29_02317 6a6034fae5874d75091e5bab37ef0bb7 216 TIGRFAM TIGR00875 fsa_talC_mipB: fructose-6-phosphate aldolase 1 211 4.2E-102 T 14-10-2018 IPR004731 Transaldolase type 3B/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 DB29_02317 6a6034fae5874d75091e5bab37ef0bb7 216 ProSitePatterns PS01054 Transaldolase signature 1. 24 32 - T 14-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 DB29_02317 6a6034fae5874d75091e5bab37ef0bb7 216 ProSitePatterns PS00958 Transaldolase active site. 80 97 - T 14-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 DB29_02317 6a6034fae5874d75091e5bab37ef0bb7 216 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 3 204 1.7E-56 T 14-10-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 DB29_02317 6a6034fae5874d75091e5bab37ef0bb7 216 Hamap MF_00494 Probable transaldolase [tal]. 1 214 47.393 T 14-10-2018 IPR022999 Transaldolase type 3B, putative GO:0004801 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 DB29_03988 486941bbfc7b91c5e3a9adc98ee21320 115 SUPERFAMILY SSF50104 2 114 1.7E-47 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily DB29_03988 486941bbfc7b91c5e3a9adc98ee21320 115 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 3 114 31.306 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB29_03988 486941bbfc7b91c5e3a9adc98ee21320 115 PRINTS PR00061 Ribosomal protein L19 signature 4 33 1.5E-41 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB29_03988 486941bbfc7b91c5e3a9adc98ee21320 115 PRINTS PR00061 Ribosomal protein L19 signature 88 113 1.5E-41 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB29_03988 486941bbfc7b91c5e3a9adc98ee21320 115 PRINTS PR00061 Ribosomal protein L19 signature 34 63 1.5E-41 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB29_03988 486941bbfc7b91c5e3a9adc98ee21320 115 PIRSF PIRSF002191 1 115 2.7E-50 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB29_03988 486941bbfc7b91c5e3a9adc98ee21320 115 ProSitePatterns PS01015 Ribosomal protein L19 signature. 86 101 - T 14-10-2018 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 DB29_03988 486941bbfc7b91c5e3a9adc98ee21320 115 Pfam PF01245 Ribosomal protein L19 3 112 2.8E-52 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB29_03988 486941bbfc7b91c5e3a9adc98ee21320 115 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 3 113 8.6E-51 T 14-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB29_03988 486941bbfc7b91c5e3a9adc98ee21320 115 Gene3D G3DSA:2.30.30.790 6 115 4.7E-14 T 14-10-2018 IPR038657 Ribosomal protein L19 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB29_02393 067459b8ff05ada53e30a008ed81cc12 504 Gene3D G3DSA:3.30.450.40 4 184 5.2E-26 T 14-10-2018 IPR029016 GAF-like domain superfamily DB29_02393 067459b8ff05ada53e30a008ed81cc12 504 Pfam PF13556 PucR C-terminal helix-turn-helix domain 437 494 9.2E-17 T 14-10-2018 IPR025736 PucR C-terminal helix-turn-helix domain DB29_02393 067459b8ff05ada53e30a008ed81cc12 504 SMART SM00065 24 183 5.4E-5 T 14-10-2018 IPR003018 GAF domain GO:0005515 DB29_02393 067459b8ff05ada53e30a008ed81cc12 504 Gene3D G3DSA:1.10.10.2840 375 498 1.1E-15 T 14-10-2018 DB29_02393 067459b8ff05ada53e30a008ed81cc12 504 Pfam PF13185 GAF domain 22 174 2.9E-12 T 14-10-2018 IPR003018 GAF domain GO:0005515 DB29_02393 067459b8ff05ada53e30a008ed81cc12 504 SUPERFAMILY SSF55781 8 180 4.8E-19 T 14-10-2018 DB29_00586 99d4341cc75a197c6e922683cef27d8e 495 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 39 486 5.6E-76 T 14-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 DB29_00586 99d4341cc75a197c6e922683cef27d8e 495 Pfam PF00939 Sodium:sulfate symporter transmembrane region 18 490 1.7E-75 T 14-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 DB29_03281 85b7eabf74db504286cfb30857bd0801 429 SUPERFAMILY SSF51604 137 427 3.25E-133 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily DB29_03281 85b7eabf74db504286cfb30857bd0801 429 Gene3D G3DSA:3.30.390.10 1 125 1.5E-56 T 14-10-2018 IPR029017 Enolase-like, N-terminal DB29_03281 85b7eabf74db504286cfb30857bd0801 429 ProSitePatterns PS00164 Enolase signature. 335 348 - T 14-10-2018 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DB29_03281 85b7eabf74db504286cfb30857bd0801 429 PIRSF PIRSF001400 1 426 2.4E-198 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DB29_03281 85b7eabf74db504286cfb30857bd0801 429 SMART SM01193 4 133 2.4E-96 T 14-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DB29_03281 85b7eabf74db504286cfb30857bd0801 429 Gene3D G3DSA:3.20.20.120 127 429 2.0E-141 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily DB29_03281 85b7eabf74db504286cfb30857bd0801 429 Pfam PF00113 Enolase, C-terminal TIM barrel domain 140 424 9.7E-145 T 14-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DB29_03281 85b7eabf74db504286cfb30857bd0801 429 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 426 1.0E-218 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DB29_03281 85b7eabf74db504286cfb30857bd0801 429 Hamap MF_00318 Enolase [eno]. 2 412 46.086 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DB29_03281 85b7eabf74db504286cfb30857bd0801 429 SMART SM01192 138 426 2.4E-233 T 14-10-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DB29_03281 85b7eabf74db504286cfb30857bd0801 429 SUPERFAMILY SSF54826 3 137 6.76E-58 T 14-10-2018 DB29_03281 85b7eabf74db504286cfb30857bd0801 429 PRINTS PR00148 Enolase signature 37 51 5.9E-47 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DB29_03281 85b7eabf74db504286cfb30857bd0801 429 PRINTS PR00148 Enolase signature 312 323 5.9E-47 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DB29_03281 85b7eabf74db504286cfb30857bd0801 429 PRINTS PR00148 Enolase signature 160 173 5.9E-47 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DB29_03281 85b7eabf74db504286cfb30857bd0801 429 PRINTS PR00148 Enolase signature 106 122 5.9E-47 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DB29_03281 85b7eabf74db504286cfb30857bd0801 429 PRINTS PR00148 Enolase signature 335 349 5.9E-47 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DB29_03281 85b7eabf74db504286cfb30857bd0801 429 PRINTS PR00148 Enolase signature 364 381 5.9E-47 T 14-10-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DB29_03281 85b7eabf74db504286cfb30857bd0801 429 Pfam PF03952 Enolase, N-terminal domain 4 133 6.7E-61 T 14-10-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 DB29_00714 89b55c1a374b8f854965946342872a42 254 Pfam PF08220 DeoR-like helix-turn-helix domain 6 61 6.6E-16 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DB29_00714 89b55c1a374b8f854965946342872a42 254 Pfam PF00455 DeoR C terminal sensor domain 75 228 2.0E-47 T 14-10-2018 IPR014036 DeoR C-terminal sensor domain DB29_00714 89b55c1a374b8f854965946342872a42 254 SMART SM00420 6 58 3.5E-18 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DB29_00714 89b55c1a374b8f854965946342872a42 254 SUPERFAMILY SSF100950 74 231 1.59E-34 T 14-10-2018 IPR037171 NagB/RpiA transferase-like DB29_00714 89b55c1a374b8f854965946342872a42 254 Gene3D G3DSA:1.10.10.10 1 56 5.2E-6 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_00714 89b55c1a374b8f854965946342872a42 254 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 14-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 DB29_00714 89b55c1a374b8f854965946342872a42 254 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 1.4E-7 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DB29_00714 89b55c1a374b8f854965946342872a42 254 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 1.4E-7 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DB29_00714 89b55c1a374b8f854965946342872a42 254 SMART SM01134 73 231 6.4E-67 T 14-10-2018 DB29_00714 89b55c1a374b8f854965946342872a42 254 SUPERFAMILY SSF46785 5 78 6.36E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_01337 155d0db4f6da27d12b18d8e748d19513 293 Gene3D G3DSA:1.10.3720.10 47 288 9.9E-78 T 14-10-2018 IPR035906 MetI-like superfamily DB29_01337 155d0db4f6da27d12b18d8e748d19513 293 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 78 284 8.2E-20 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DB29_01337 155d0db4f6da27d12b18d8e748d19513 293 SUPERFAMILY SSF161098 51 277 1.01E-65 T 14-10-2018 IPR035906 MetI-like superfamily DB29_04157 df004ec32adeb2a46a2ef502dcccad20 409 SUPERFAMILY SSF144052 3 408 1.57E-150 T 14-10-2018 DB29_04157 df004ec32adeb2a46a2ef502dcccad20 409 Gene3D G3DSA:3.40.1830.10 1 179 5.2E-70 T 14-10-2018 IPR035097 Peptidase M29, N-terminal DB29_04157 df004ec32adeb2a46a2ef502dcccad20 409 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 79 98 3.8E-76 T 14-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 DB29_04157 df004ec32adeb2a46a2ef502dcccad20 409 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 388 407 3.8E-76 T 14-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 DB29_04157 df004ec32adeb2a46a2ef502dcccad20 409 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 14 31 3.8E-76 T 14-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 DB29_04157 df004ec32adeb2a46a2ef502dcccad20 409 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 362 384 3.8E-76 T 14-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 DB29_04157 df004ec32adeb2a46a2ef502dcccad20 409 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 323 344 3.8E-76 T 14-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 DB29_04157 df004ec32adeb2a46a2ef502dcccad20 409 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 155 177 3.8E-76 T 14-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 DB29_04157 df004ec32adeb2a46a2ef502dcccad20 409 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 244 263 3.8E-76 T 14-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 DB29_04157 df004ec32adeb2a46a2ef502dcccad20 409 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 300 320 3.8E-76 T 14-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 DB29_04157 df004ec32adeb2a46a2ef502dcccad20 409 Pfam PF02073 Thermophilic metalloprotease (M29) 3 407 8.1E-177 T 14-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 DB29_01609 98436ac1a6a17e096def1b08f2df16ef 337 SUPERFAMILY SSF50129 2 169 1.32E-47 T 14-10-2018 IPR011032 GroES-like superfamily DB29_01609 98436ac1a6a17e096def1b08f2df16ef 337 Gene3D G3DSA:3.40.50.720 147 282 6.8E-90 T 14-10-2018 DB29_01609 98436ac1a6a17e096def1b08f2df16ef 337 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 24 130 5.2E-34 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 DB29_01609 98436ac1a6a17e096def1b08f2df16ef 337 SUPERFAMILY SSF51735 134 301 3.63E-32 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_01609 98436ac1a6a17e096def1b08f2df16ef 337 Pfam PF00107 Zinc-binding dehydrogenase 170 296 9.9E-22 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 DB29_01609 98436ac1a6a17e096def1b08f2df16ef 337 Gene3D G3DSA:3.90.180.10 24 332 6.8E-90 T 14-10-2018 DB29_03447 8a488da44a058882984fbcd3604eec63 533 Pfam PF01943 Polysaccharide biosynthesis protein 6 319 6.9E-42 T 14-10-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 DB29_03447 8a488da44a058882984fbcd3604eec63 533 PIRSF PIRSF038958 1 533 3.8E-111 T 14-10-2018 IPR024923 Peptidoglycan biosynthesis protein, SpoVB-type DB29_03447 8a488da44a058882984fbcd3604eec63 533 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 375 521 4.6E-30 T 14-10-2018 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain DB29_02683 9eb9a7a9348ae81360d0eb168306a87f 372 Pfam PF03704 Bacterial transcriptional activator domain 255 365 2.9E-15 T 14-10-2018 IPR005158 Bacterial transcriptional activator domain DB29_02683 9eb9a7a9348ae81360d0eb168306a87f 372 SUPERFAMILY SSF52172 2 122 5.98E-28 T 14-10-2018 IPR011006 CheY-like superfamily DB29_02683 9eb9a7a9348ae81360d0eb168306a87f 372 Gene3D G3DSA:3.40.50.2300 1 125 8.0E-30 T 14-10-2018 DB29_02683 9eb9a7a9348ae81360d0eb168306a87f 372 Gene3D G3DSA:1.10.10.10 126 223 6.2E-9 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_02683 9eb9a7a9348ae81360d0eb168306a87f 372 SUPERFAMILY SSF46894 148 205 2.83E-7 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DB29_02683 9eb9a7a9348ae81360d0eb168306a87f 372 Pfam PF00072 Response regulator receiver domain 4 112 4.4E-20 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DB29_02683 9eb9a7a9348ae81360d0eb168306a87f 372 SMART SM01043 228 367 2.5E-26 T 14-10-2018 IPR005158 Bacterial transcriptional activator domain DB29_02683 9eb9a7a9348ae81360d0eb168306a87f 372 Gene3D G3DSA:1.25.40.10 237 372 2.0E-17 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DB29_02683 9eb9a7a9348ae81360d0eb168306a87f 372 SMART SM00448 1 112 5.8E-20 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DB29_02683 9eb9a7a9348ae81360d0eb168306a87f 372 SUPERFAMILY SSF48452 249 369 5.96E-15 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DB29_02045 0f628224f216352f14b943fe97023a95 424 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 422 42.371 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 DB29_02045 0f628224f216352f14b943fe97023a95 424 PRINTS PR00981 Seryl-tRNA synthetase signature 276 289 3.4E-32 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 DB29_02045 0f628224f216352f14b943fe97023a95 424 PRINTS PR00981 Seryl-tRNA synthetase signature 333 349 3.4E-32 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 DB29_02045 0f628224f216352f14b943fe97023a95 424 PRINTS PR00981 Seryl-tRNA synthetase signature 316 329 3.4E-32 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 DB29_02045 0f628224f216352f14b943fe97023a95 424 PRINTS PR00981 Seryl-tRNA synthetase signature 264 276 3.4E-32 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 DB29_02045 0f628224f216352f14b943fe97023a95 424 PRINTS PR00981 Seryl-tRNA synthetase signature 351 367 3.4E-32 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 DB29_02045 0f628224f216352f14b943fe97023a95 424 Gene3D G3DSA:3.30.930.10 106 424 3.2E-123 T 14-10-2018 DB29_02045 0f628224f216352f14b943fe97023a95 424 PIRSF PIRSF001529 1 424 6.5E-183 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 DB29_02045 0f628224f216352f14b943fe97023a95 424 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 108 9.5E-31 T 14-10-2018 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: R-HSA-2408557|Reactome: R-HSA-379716 DB29_02045 0f628224f216352f14b943fe97023a95 424 SUPERFAMILY SSF46589 1 113 6.28E-29 T 14-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 DB29_02045 0f628224f216352f14b943fe97023a95 424 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 223 400 7.8E-35 T 14-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 DB29_02045 0f628224f216352f14b943fe97023a95 424 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 417 5.0E-175 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 DB29_02045 0f628224f216352f14b943fe97023a95 424 SUPERFAMILY SSF55681 117 418 1.19E-102 T 14-10-2018 DB29_02045 0f628224f216352f14b943fe97023a95 424 Gene3D G3DSA:1.10.287.40 1 105 1.3E-24 T 14-10-2018 DB29_03775 104d70075984ea55ae68552468004a07 277 SUPERFAMILY SSF55681 3 275 2.73E-65 T 14-10-2018 DB29_03775 104d70075984ea55ae68552468004a07 277 Gene3D G3DSA:3.30.930.10 5 277 6.2E-67 T 14-10-2018 DB29_03775 104d70075984ea55ae68552468004a07 277 Pfam PF03099 Biotin/lipoate A/B protein ligase family 52 188 1.4E-25 T 14-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 DB29_03775 104d70075984ea55ae68552468004a07 277 Hamap MF_02118 Octanoyltransferase LipM [lipM]. 2 277 65.95 T 14-10-2018 IPR024898 Octanoyltransferase LipM GO:0009107|GO:0009249|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 DB29_00335 3bf54c2ee618528b421229e87ca9e999 142 SUPERFAMILY SSF89095 1 136 1.15E-41 T 14-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 DB29_00335 3bf54c2ee618528b421229e87ca9e999 142 Gene3D G3DSA:1.10.1510.10 1 80 1.1E-26 T 14-10-2018 DB29_00335 3bf54c2ee618528b421229e87ca9e999 142 Pfam PF09424 Yqey-like protein 1 136 2.1E-52 T 14-10-2018 IPR019004 Uncharacterised protein YqeY/AIM41 DB29_00335 3bf54c2ee618528b421229e87ca9e999 142 Gene3D G3DSA:1.10.10.410 81 137 1.5E-26 T 14-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal DB29_02143 590b40a3d00476c0ef8ec1acd9485146 470 SUPERFAMILY SSF55103 220 461 1.54E-70 T 14-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 DB29_02143 590b40a3d00476c0ef8ec1acd9485146 470 Gene3D G3DSA:3.30.70.2740 336 417 8.8E-17 T 14-10-2018 DB29_02143 590b40a3d00476c0ef8ec1acd9485146 470 Gene3D G3DSA:1.10.45.10 418 458 4.5E-11 T 14-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 DB29_02143 590b40a3d00476c0ef8ec1acd9485146 470 Pfam PF01565 FAD binding domain 41 180 7.2E-41 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 DB29_02143 590b40a3d00476c0ef8ec1acd9485146 470 Gene3D G3DSA:3.30.465.40 3 238 1.1E-73 T 14-10-2018 DB29_02143 590b40a3d00476c0ef8ec1acd9485146 470 SUPERFAMILY SSF56176 4 217 7.94E-70 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 DB29_02143 590b40a3d00476c0ef8ec1acd9485146 470 Pfam PF02913 FAD linked oxidases, C-terminal domain 216 457 2.8E-73 T 14-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 DB29_02876 04d159e818745a20e543caf7939b0f8f 181 Pfam PF03358 NADPH-dependent FMN reductase 3 144 4.1E-25 T 14-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 DB29_02876 04d159e818745a20e543caf7939b0f8f 181 TIGRFAM TIGR03567 FMN_reduc_SsuE: FMN reductase 5 168 3.5E-58 T 14-10-2018 IPR020048 NADPH-dependent FMN reductase, SsuE GO:0008752|GO:0046306|GO:0055114 KEGG: 00740+1.5.1.38|MetaCyc: PWY-7723 DB29_02876 04d159e818745a20e543caf7939b0f8f 181 Gene3D G3DSA:3.40.50.360 3 178 1.2E-38 T 14-10-2018 IPR029039 Flavoprotein-like superfamily DB29_02876 04d159e818745a20e543caf7939b0f8f 181 SUPERFAMILY SSF52218 3 167 1.55E-26 T 14-10-2018 IPR029039 Flavoprotein-like superfamily DB29_04079 209e92b245184271a62b3c3fb79ecef1 350 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 3 322 7.6E-174 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 DB29_04079 209e92b245184271a62b3c3fb79ecef1 350 Gene3D G3DSA:3.30.250.10 267 348 6.7E-28 T 14-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal DB29_04079 209e92b245184271a62b3c3fb79ecef1 350 PRINTS PR00142 RecA protein signature 296 313 4.8E-86 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 DB29_04079 209e92b245184271a62b3c3fb79ecef1 350 PRINTS PR00142 RecA protein signature 209 237 4.8E-86 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 DB29_04079 209e92b245184271a62b3c3fb79ecef1 350 PRINTS PR00142 RecA protein signature 126 155 4.8E-86 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 DB29_04079 209e92b245184271a62b3c3fb79ecef1 350 PRINTS PR00142 RecA protein signature 242 271 4.8E-86 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 DB29_04079 209e92b245184271a62b3c3fb79ecef1 350 PRINTS PR00142 RecA protein signature 92 121 4.8E-86 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 DB29_04079 209e92b245184271a62b3c3fb79ecef1 350 PRINTS PR00142 RecA protein signature 164 193 4.8E-86 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 DB29_04079 209e92b245184271a62b3c3fb79ecef1 350 Hamap MF_00268 Protein RecA [recA]. 4 328 53.095 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 DB29_04079 209e92b245184271a62b3c3fb79ecef1 350 SUPERFAMILY SSF52540 3 266 1.35E-64 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_04079 209e92b245184271a62b3c3fb79ecef1 350 Pfam PF00154 recA bacterial DNA recombination protein 6 267 2.9E-145 T 14-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 DB29_04079 209e92b245184271a62b3c3fb79ecef1 350 ProSitePatterns PS00321 recA signature. 212 220 - T 14-10-2018 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 DB29_04079 209e92b245184271a62b3c3fb79ecef1 350 Gene3D G3DSA:3.40.50.300 25 266 8.6E-80 T 14-10-2018 DB29_04079 209e92b245184271a62b3c3fb79ecef1 350 SMART SM00382 56 227 1.1E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_04079 209e92b245184271a62b3c3fb79ecef1 350 SUPERFAMILY SSF54752 267 325 1.31E-21 T 14-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal DB29_01059 81a9c5bd62e56aa13135a1d4165e2965 515 SUPERFAMILY SSF52402 188 408 2.87E-60 T 14-10-2018 DB29_01059 81a9c5bd62e56aa13135a1d4165e2965 515 PRINTS PR00097 Anthranilate synthase component II signature 53 62 1.7E-5 T 14-10-2018 DB29_01059 81a9c5bd62e56aa13135a1d4165e2965 515 PRINTS PR00097 Anthranilate synthase component II signature 168 181 1.7E-5 T 14-10-2018 DB29_01059 81a9c5bd62e56aa13135a1d4165e2965 515 PRINTS PR00097 Anthranilate synthase component II signature 80 91 1.7E-5 T 14-10-2018 DB29_01059 81a9c5bd62e56aa13135a1d4165e2965 515 Gene3D G3DSA:3.30.300.10 396 515 8.2E-51 T 14-10-2018 DB29_01059 81a9c5bd62e56aa13135a1d4165e2965 515 SUPERFAMILY SSF54810 395 515 2.75E-50 T 14-10-2018 DB29_01059 81a9c5bd62e56aa13135a1d4165e2965 515 SUPERFAMILY SSF52317 6 228 3.12E-57 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like DB29_01059 81a9c5bd62e56aa13135a1d4165e2965 515 Pfam PF00117 Glutamine amidotransferase class-I 10 190 3.9E-39 T 14-10-2018 IPR017926 Glutamine amidotransferase DB29_01059 81a9c5bd62e56aa13135a1d4165e2965 515 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 6 515 55.118 T 14-10-2018 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221 DB29_01059 81a9c5bd62e56aa13135a1d4165e2965 515 Pfam PF00958 GMP synthase C terminal domain 423 514 4.8E-44 T 14-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 DB29_01059 81a9c5bd62e56aa13135a1d4165e2965 515 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 203 515 6.6E-157 T 14-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 DB29_01059 81a9c5bd62e56aa13135a1d4165e2965 515 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 80 96 2.3E-5 T 14-10-2018 DB29_01059 81a9c5bd62e56aa13135a1d4165e2965 515 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 50 64 2.3E-5 T 14-10-2018 DB29_01059 81a9c5bd62e56aa13135a1d4165e2965 515 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 9 23 2.3E-5 T 14-10-2018 DB29_01059 81a9c5bd62e56aa13135a1d4165e2965 515 PRINTS PR00096 Glutamine amidotransferase superfamily signature 80 91 3.1E-7 T 14-10-2018 DB29_01059 81a9c5bd62e56aa13135a1d4165e2965 515 PRINTS PR00096 Glutamine amidotransferase superfamily signature 168 181 3.1E-7 T 14-10-2018 DB29_01059 81a9c5bd62e56aa13135a1d4165e2965 515 PRINTS PR00096 Glutamine amidotransferase superfamily signature 53 62 3.1E-7 T 14-10-2018 DB29_01059 81a9c5bd62e56aa13135a1d4165e2965 515 Gene3D G3DSA:3.40.50.620 200 395 1.6E-77 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DB29_01059 81a9c5bd62e56aa13135a1d4165e2965 515 Pfam PF02540 NAD synthase 203 392 1.0E-9 T 14-10-2018 IPR022310 NAD/GMP synthase DB29_01059 81a9c5bd62e56aa13135a1d4165e2965 515 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 9 195 1.7E-80 T 14-10-2018 IPR004739 GMP synthase, glutamine amidotransferase GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 DB29_01059 81a9c5bd62e56aa13135a1d4165e2965 515 Gene3D G3DSA:3.40.50.880 1 196 1.8E-54 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like DB29_00069 777044ae3462c720cda6bbcb779539a7 115 PIRSF PIRSF029904 2 112 3.1E-53 T 14-10-2018 IPR012359 NTP pyrophosphohydrolase MazG-related, YpjD DB29_00069 777044ae3462c720cda6bbcb779539a7 115 Gene3D G3DSA:1.10.287.1080 3 115 2.4E-34 T 14-10-2018 DB29_00069 777044ae3462c720cda6bbcb779539a7 115 SUPERFAMILY SSF101386 5 105 8.01E-26 T 14-10-2018 DB29_00069 777044ae3462c720cda6bbcb779539a7 115 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 26 105 5.5E-19 T 14-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core DB29_01333 e514c8cb39ae9c714246b9a74942dc32 436 Gene3D G3DSA:1.25.40.680 242 400 4.3E-51 T 14-10-2018 DB29_01333 e514c8cb39ae9c714246b9a74942dc32 436 Gene3D G3DSA:1.10.510.10 1 219 2.2E-80 T 14-10-2018 DB29_01333 e514c8cb39ae9c714246b9a74942dc32 436 Pfam PF10140 WXG100 protein secretion system (Wss), protein YukC 29 383 5.4E-135 T 14-10-2018 IPR018778 Type VII secretion system EssB DB29_01333 e514c8cb39ae9c714246b9a74942dc32 436 TIGRFAM TIGR03926 T7_EssB: type VII secretion protein EssB 7 383 9.3E-147 T 14-10-2018 IPR018778 Type VII secretion system EssB DB29_02728 784a591b9243ce5a922163547a10c1c7 165 Gene3D G3DSA:2.40.440.10 49 164 5.7E-48 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like DB29_02728 784a591b9243ce5a922163547a10c1c7 165 Pfam PF01476 LysM domain 4 47 9.2E-12 T 14-10-2018 IPR018392 LysM domain DB29_02728 784a591b9243ce5a922163547a10c1c7 165 Gene3D G3DSA:3.10.350.10 1 48 9.5E-17 T 14-10-2018 IPR036779 LysM domain superfamily DB29_02728 784a591b9243ce5a922163547a10c1c7 165 SMART SM00257 3 47 3.1E-14 T 14-10-2018 IPR018392 LysM domain DB29_02728 784a591b9243ce5a922163547a10c1c7 165 Pfam PF03734 L,D-transpeptidase catalytic domain 57 163 2.0E-23 T 14-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 DB29_02728 784a591b9243ce5a922163547a10c1c7 165 SUPERFAMILY SSF141523 56 163 2.75E-37 T 14-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like DB29_02728 784a591b9243ce5a922163547a10c1c7 165 SUPERFAMILY SSF54106 2 47 1.96E-11 T 14-10-2018 DB29_01829 e8a050c26bd77b7904ffb1f812c5822b 523 Gene3D G3DSA:3.10.105.10 276 495 2.5E-133 T 14-10-2018 DB29_01829 e8a050c26bd77b7904ffb1f812c5822b 523 PIRSF PIRSF002741 3 522 9.1E-110 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 DB29_01829 e8a050c26bd77b7904ffb1f812c5822b 523 Gene3D G3DSA:3.40.190.10 202 505 2.5E-133 T 14-10-2018 DB29_01829 e8a050c26bd77b7904ffb1f812c5822b 523 Gene3D G3DSA:3.90.76.10 44 201 2.5E-133 T 14-10-2018 DB29_01829 e8a050c26bd77b7904ffb1f812c5822b 523 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 77 439 5.3E-94 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain DB29_01829 e8a050c26bd77b7904ffb1f812c5822b 523 SUPERFAMILY SSF53850 36 520 3.57E-133 T 14-10-2018 DB29_01186 ee2748798a54cbd5c9c798e3f88209ed 261 SUPERFAMILY SSF88659 107 184 1.0E-14 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like DB29_01186 ee2748798a54cbd5c9c798e3f88209ed 261 Gene3D G3DSA:1.10.10.10 184 255 4.9E-14 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_01186 ee2748798a54cbd5c9c798e3f88209ed 261 PRINTS PR00046 Major sigma-70 factor signature 58 71 4.1E-9 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DB29_01186 ee2748798a54cbd5c9c798e3f88209ed 261 PRINTS PR00046 Major sigma-70 factor signature 206 218 4.1E-9 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DB29_01186 ee2748798a54cbd5c9c798e3f88209ed 261 PRINTS PR00046 Major sigma-70 factor signature 238 249 4.1E-9 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DB29_01186 ee2748798a54cbd5c9c798e3f88209ed 261 PRINTS PR00046 Major sigma-70 factor signature 223 238 4.1E-9 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DB29_01186 ee2748798a54cbd5c9c798e3f88209ed 261 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 223 249 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DB29_01186 ee2748798a54cbd5c9c798e3f88209ed 261 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 30 251 1.0E-33 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 DB29_01186 ee2748798a54cbd5c9c798e3f88209ed 261 Gene3D G3DSA:1.10.10.10 104 156 8.4E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_01186 ee2748798a54cbd5c9c798e3f88209ed 261 Pfam PF04539 Sigma-70 region 3 113 187 6.5E-16 T 14-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 DB29_01186 ee2748798a54cbd5c9c798e3f88209ed 261 SUPERFAMILY SSF88659 173 254 4.49E-18 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like DB29_01186 ee2748798a54cbd5c9c798e3f88209ed 261 TIGRFAM TIGR02980 SigBFG: RNA polymerase sigma-70 factor, sigma-B/F/G subfamily 28 253 2.6E-87 T 14-10-2018 IPR014322 RNA polymerase sigma-B/F/G type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DB29_01186 ee2748798a54cbd5c9c798e3f88209ed 261 TIGRFAM TIGR02941 Sigma_B: RNA polymerase sigma-B factor 3 253 1.3E-115 T 14-10-2018 IPR014288 RNA polymerase sigma-B factor GO:0016987 DB29_01186 ee2748798a54cbd5c9c798e3f88209ed 261 SUPERFAMILY SSF88946 13 103 6.41E-23 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 DB29_01186 ee2748798a54cbd5c9c798e3f88209ed 261 Pfam PF04542 Sigma-70 region 2 34 103 2.8E-12 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 DB29_01186 ee2748798a54cbd5c9c798e3f88209ed 261 Gene3D G3DSA:1.20.120.1810 4 102 3.7E-11 T 14-10-2018 DB29_01186 ee2748798a54cbd5c9c798e3f88209ed 261 Pfam PF04545 Sigma-70, region 4 202 251 6.6E-19 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 DB29_03610 9cefa5bc218cc34923812e27b8f64eef 341 SUPERFAMILY SSF51735 3 182 1.82E-72 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_03610 9cefa5bc218cc34923812e27b8f64eef 341 Gene3D G3DSA:3.40.50.720 1 181 8.7E-79 T 14-10-2018 DB29_03610 9cefa5bc218cc34923812e27b8f64eef 341 Hamap MF_00435 Ketol-acid reductoisomerase (NADP(+)) [ilvC]. 2 328 45.059 T 14-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 DB29_03610 9cefa5bc218cc34923812e27b8f64eef 341 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 183 325 2.8E-66 T 14-10-2018 IPR000506 Ketol-acid reductoisomerase, C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 DB29_03610 9cefa5bc218cc34923812e27b8f64eef 341 PIRSF PIRSF000116 201 332 3.1E-17 T 14-10-2018 IPR014359 Ketol-acid reductoisomerase, prokaryotic GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 DB29_03610 9cefa5bc218cc34923812e27b8f64eef 341 PIRSF PIRSF000116 1 207 3.1E-40 T 14-10-2018 IPR014359 Ketol-acid reductoisomerase, prokaryotic GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 DB29_03610 9cefa5bc218cc34923812e27b8f64eef 341 SUPERFAMILY SSF48179 183 330 2.72E-69 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 DB29_03610 9cefa5bc218cc34923812e27b8f64eef 341 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 15 327 4.2E-144 T 14-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 DB29_03610 9cefa5bc218cc34923812e27b8f64eef 341 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 14 177 2.1E-77 T 14-10-2018 IPR013116 Ketol-acid reductoisomerase, N-terminal KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 DB29_03610 9cefa5bc218cc34923812e27b8f64eef 341 Gene3D G3DSA:1.10.3730.40 182 334 5.4E-70 T 14-10-2018 DB29_01387 0f72f23bf59e967611b098fc8a23064d 110 PIRSF PIRSF000699 1 110 1.9E-40 T 14-10-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 DB29_01387 0f72f23bf59e967611b098fc8a23064d 110 Gene3D G3DSA:1.20.58.280 2 108 8.5E-39 T 14-10-2018 DB29_01387 0f72f23bf59e967611b098fc8a23064d 110 Pfam PF02255 PTS system, Lactose/Cellobiose specific IIA subunit 10 103 4.8E-35 T 14-10-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 DB29_01387 0f72f23bf59e967611b098fc8a23064d 110 SUPERFAMILY SSF46973 7 104 1.31E-35 T 14-10-2018 IPR036542 Phosphotransferase system, lactose/cellobiose-type IIA subunit superfamily GO:0009401 DB29_04113 af857207eecf0019645ee681fe509074 407 Gene3D G3DSA:1.20.1250.20 256 406 2.5E-17 T 14-10-2018 DB29_04113 af857207eecf0019645ee681fe509074 407 Pfam PF07690 Major Facilitator Superfamily 15 271 3.3E-34 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DB29_04113 af857207eecf0019645ee681fe509074 407 SUPERFAMILY SSF103473 6 400 5.1E-72 T 14-10-2018 IPR036259 MFS transporter superfamily DB29_04113 af857207eecf0019645ee681fe509074 407 Gene3D G3DSA:1.20.1250.20 4 255 1.9E-45 T 14-10-2018 DB29_03597 6120ec59e89603258ed4817eb36408cf 79 Pfam PF00037 4Fe-4S binding domain 34 55 5.3E-8 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DB29_03597 6120ec59e89603258ed4817eb36408cf 79 SUPERFAMILY SSF54862 1 60 1.14E-18 T 14-10-2018 DB29_03597 6120ec59e89603258ed4817eb36408cf 79 PRINTS PR00354 7Fe ferredoxin signature 9 19 1.3E-12 T 14-10-2018 IPR000813 7Fe ferredoxin GO:0009055 DB29_03597 6120ec59e89603258ed4817eb36408cf 79 PRINTS PR00354 7Fe ferredoxin signature 35 52 1.3E-12 T 14-10-2018 IPR000813 7Fe ferredoxin GO:0009055 DB29_03597 6120ec59e89603258ed4817eb36408cf 79 PRINTS PR00354 7Fe ferredoxin signature 19 29 1.3E-12 T 14-10-2018 IPR000813 7Fe ferredoxin GO:0009055 DB29_03597 6120ec59e89603258ed4817eb36408cf 79 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 40 51 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DB29_03597 6120ec59e89603258ed4817eb36408cf 79 Pfam PF12800 4Fe-4S binding domain 9 23 0.11 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DB29_03597 6120ec59e89603258ed4817eb36408cf 79 Gene3D G3DSA:3.30.70.20 2 79 1.7E-27 T 14-10-2018 DB29_00310 16558b00362c1939fb8edd7fb1ef70ae 373 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 10 351 8.1E-77 T 14-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 DB29_00310 16558b00362c1939fb8edd7fb1ef70ae 373 PIRSF PIRSF037489 3 373 3.5E-154 T 14-10-2018 IPR017221 GTP cyclohydrolase 1 type 2//Nif3, bacteria DB29_00310 16558b00362c1939fb8edd7fb1ef70ae 373 SUPERFAMILY SSF102705 7 372 1.7E-127 T 14-10-2018 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily DB29_00310 16558b00362c1939fb8edd7fb1ef70ae 373 Gene3D G3DSA:3.40.1390.30 3 128 4.1E-37 T 14-10-2018 DB29_00310 16558b00362c1939fb8edd7fb1ef70ae 373 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 7 368 9.7E-79 T 14-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 DB29_00310 16558b00362c1939fb8edd7fb1ef70ae 373 Gene3D G3DSA:3.30.70.120 133 240 8.6E-44 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal DB29_03695 5295bf47e802828c0c7949fa8e769dbe 269 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 6 263 1.3E-58 T 14-10-2018 IPR000150 Cof family GO:0016787 DB29_03695 5295bf47e802828c0c7949fa8e769dbe 269 Gene3D G3DSA:3.40.50.1000 7 262 9.4E-64 T 14-10-2018 IPR023214 HAD superfamily DB29_03695 5295bf47e802828c0c7949fa8e769dbe 269 Gene3D G3DSA:3.30.1240.10 86 192 9.4E-64 T 14-10-2018 DB29_03695 5295bf47e802828c0c7949fa8e769dbe 269 SUPERFAMILY SSF56784 3 267 6.28E-66 T 14-10-2018 IPR036412 HAD-like superfamily DB29_03695 5295bf47e802828c0c7949fa8e769dbe 269 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 6 236 3.3E-27 T 14-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 DB29_03695 5295bf47e802828c0c7949fa8e769dbe 269 ProSitePatterns PS01228 Hypothetical cof family signature 1. 6 17 - T 14-10-2018 DB29_03695 5295bf47e802828c0c7949fa8e769dbe 269 Pfam PF08282 haloacid dehalogenase-like hydrolase 7 263 1.0E-63 T 14-10-2018 DB29_02511 1406d46f1d098497e9a58098295366ec 294 Pfam PF00483 Nucleotidyl transferase 6 256 2.0E-37 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 DB29_02511 1406d46f1d098497e9a58098295366ec 294 Gene3D G3DSA:3.90.550.10 1 290 1.1E-96 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DB29_02511 1406d46f1d098497e9a58098295366ec 294 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 4 261 3.1E-121 T 14-10-2018 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817 DB29_02511 1406d46f1d098497e9a58098295366ec 294 SUPERFAMILY SSF53448 5 273 9.18E-72 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DB29_02333 fc76c9e7ed36c6acfb349c5f8f342eb1 437 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 234 386 5.3E-30 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DB29_02333 fc76c9e7ed36c6acfb349c5f8f342eb1 437 SMART SM00283 158 433 4.4E-49 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DB29_02333 fc76c9e7ed36c6acfb349c5f8f342eb1 437 SMART SM00304 76 129 0.0031 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DB29_02333 fc76c9e7ed36c6acfb349c5f8f342eb1 437 Gene3D G3DSA:1.10.287.950 130 433 9.7E-55 T 14-10-2018 DB29_02333 fc76c9e7ed36c6acfb349c5f8f342eb1 437 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 186 215 7.2E-5 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DB29_02333 fc76c9e7ed36c6acfb349c5f8f342eb1 437 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 285 314 7.2E-5 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DB29_02333 fc76c9e7ed36c6acfb349c5f8f342eb1 437 SUPERFAMILY SSF58104 105 432 5.49E-58 T 14-10-2018 DB29_02333 fc76c9e7ed36c6acfb349c5f8f342eb1 437 Gene3D G3DSA:1.20.1480.50 44 129 3.5E-9 T 14-10-2018 DB29_00183 dcc45e0794c1e093a062d1b1e56ab79f 350 Gene3D G3DSA:3.90.226.10 3 350 1.1E-113 T 14-10-2018 DB29_00183 dcc45e0794c1e093a062d1b1e56ab79f 350 SUPERFAMILY SSF52096 5 333 2.67E-59 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily DB29_00183 dcc45e0794c1e093a062d1b1e56ab79f 350 Pfam PF16113 Enoyl-CoA hydratase/isomerase 14 347 2.6E-118 T 14-10-2018 IPR032259 Enoyl-CoA hydratase/isomerase, HIBYL-CoA-H type GO:0003860 Reactome: R-HSA-70895 DB29_01869 5407372c706a3b0118d69676cae3083a 130 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 130 35.537 T 14-10-2018 IPR023035 Ribosomal protein S9, bacterial/plastid DB29_01869 5407372c706a3b0118d69676cae3083a 130 SUPERFAMILY SSF54211 5 130 2.77E-50 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DB29_01869 5407372c706a3b0118d69676cae3083a 130 Gene3D G3DSA:3.30.230.10 1 130 1.9E-52 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DB29_01869 5407372c706a3b0118d69676cae3083a 130 Pfam PF00380 Ribosomal protein S9/S16 10 130 6.7E-47 T 14-10-2018 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 DB29_01869 5407372c706a3b0118d69676cae3083a 130 ProSitePatterns PS00360 Ribosomal protein S9 signature. 69 87 - T 14-10-2018 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 DB29_01879 8d69431c4c2343c344eef849dea9024f 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 1.5E-29 T 14-10-2018 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 DB29_01879 8d69431c4c2343c344eef849dea9024f 72 Gene3D G3DSA:2.40.50.140 1 72 4.3E-39 T 14-10-2018 DB29_01879 8d69431c4c2343c344eef849dea9024f 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 71 7.7E-40 T 14-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 DB29_01879 8d69431c4c2343c344eef849dea9024f 72 SMART SM00316 4 72 3.5E-6 T 14-10-2018 IPR022967 RNA-binding domain, S1 DB29_01879 8d69431c4c2343c344eef849dea9024f 72 SUPERFAMILY SSF50249 1 71 1.35E-29 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DB29_01879 8d69431c4c2343c344eef849dea9024f 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 28.581 T 14-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 DB29_02348 85a02eda78752b6ecbaff2e48e851b2e 470 SUPERFAMILY SSF50615 1 82 7.06E-28 T 14-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DB29_02348 85a02eda78752b6ecbaff2e48e851b2e 470 Gene3D G3DSA:2.40.10.170 1 82 8.3E-32 T 14-10-2018 DB29_02348 85a02eda78752b6ecbaff2e48e851b2e 470 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 342 351 - T 14-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DB29_02348 85a02eda78752b6ecbaff2e48e851b2e 470 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 3 469 1.5E-256 T 14-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 DB29_02348 85a02eda78752b6ecbaff2e48e851b2e 470 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 469 58.323 T 14-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 DB29_02348 85a02eda78752b6ecbaff2e48e851b2e 470 SUPERFAMILY SSF47917 354 469 1.18E-52 T 14-10-2018 DB29_02348 85a02eda78752b6ecbaff2e48e851b2e 470 Gene3D G3DSA:1.10.1140.10 354 470 2.8E-57 T 14-10-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DB29_02348 85a02eda78752b6ecbaff2e48e851b2e 470 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 138 351 1.5E-68 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DB29_02348 85a02eda78752b6ecbaff2e48e851b2e 470 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 80 1.3E-24 T 14-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DB29_02348 85a02eda78752b6ecbaff2e48e851b2e 470 Gene3D G3DSA:3.40.50.300 84 352 6.8E-116 T 14-10-2018 DB29_02348 85a02eda78752b6ecbaff2e48e851b2e 470 SMART SM00382 150 335 2.6E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_02348 85a02eda78752b6ecbaff2e48e851b2e 470 SUPERFAMILY SSF52540 84 356 3.15E-91 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_03937 13e39f5a8e00877b9de635b68b35e028 301 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 53 72 8.7E-21 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 DB29_03937 13e39f5a8e00877b9de635b68b35e028 301 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 265 288 8.7E-21 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 DB29_03937 13e39f5a8e00877b9de635b68b35e028 301 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 253 262 8.7E-21 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 DB29_03937 13e39f5a8e00877b9de635b68b35e028 301 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 136 147 8.7E-21 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 DB29_03937 13e39f5a8e00877b9de635b68b35e028 301 PRINTS PR00101 Aspartate carbamoyltransferase signature 43 65 4.6E-29 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 DB29_03937 13e39f5a8e00877b9de635b68b35e028 301 PRINTS PR00101 Aspartate carbamoyltransferase signature 216 225 4.6E-29 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 DB29_03937 13e39f5a8e00877b9de635b68b35e028 301 PRINTS PR00101 Aspartate carbamoyltransferase signature 81 90 4.6E-29 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 DB29_03937 13e39f5a8e00877b9de635b68b35e028 301 PRINTS PR00101 Aspartate carbamoyltransferase signature 281 295 4.6E-29 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 DB29_03937 13e39f5a8e00877b9de635b68b35e028 301 PRINTS PR00101 Aspartate carbamoyltransferase signature 257 262 4.6E-29 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 DB29_03937 13e39f5a8e00877b9de635b68b35e028 301 PRINTS PR00101 Aspartate carbamoyltransferase signature 135 152 4.6E-29 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 DB29_03937 13e39f5a8e00877b9de635b68b35e028 301 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 11 301 35.992 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 DB29_03937 13e39f5a8e00877b9de635b68b35e028 301 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 14 148 1.4E-36 T 14-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 DB29_03937 13e39f5a8e00877b9de635b68b35e028 301 SUPERFAMILY SSF53671 10 300 1.83E-83 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 DB29_03937 13e39f5a8e00877b9de635b68b35e028 301 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 156 296 3.4E-18 T 14-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 DB29_03937 13e39f5a8e00877b9de635b68b35e028 301 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 14 299 1.5E-87 T 14-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 DB29_03937 13e39f5a8e00877b9de635b68b35e028 301 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 53 60 - T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 DB29_03937 13e39f5a8e00877b9de635b68b35e028 301 Gene3D G3DSA:3.40.50.1370 17 296 5.2E-90 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 DB29_03937 13e39f5a8e00877b9de635b68b35e028 301 Gene3D G3DSA:3.40.50.1370 136 279 5.2E-90 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 DB29_03052 404f78d9eb1f2c94ef45aecdcda99548 350 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 234 342 1.5E-19 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DB29_03052 404f78d9eb1f2c94ef45aecdcda99548 350 SUPERFAMILY SSF47384 112 186 3.34E-5 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DB29_03052 404f78d9eb1f2c94ef45aecdcda99548 350 SUPERFAMILY SSF55874 179 342 7.07E-35 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB29_03052 404f78d9eb1f2c94ef45aecdcda99548 350 SMART SM00387 233 346 4.7E-25 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DB29_03052 404f78d9eb1f2c94ef45aecdcda99548 350 Gene3D G3DSA:3.30.565.10 193 347 1.4E-32 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB29_03052 404f78d9eb1f2c94ef45aecdcda99548 350 Gene3D G3DSA:1.10.287.130 76 188 2.8E-7 T 14-10-2018 DB29_03052 404f78d9eb1f2c94ef45aecdcda99548 350 SMART SM00388 126 188 1.4E-4 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DB29_03052 404f78d9eb1f2c94ef45aecdcda99548 350 PRINTS PR00344 Bacterial sensor protein C-terminal signature 306 324 2.3E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB29_03052 404f78d9eb1f2c94ef45aecdcda99548 350 PRINTS PR00344 Bacterial sensor protein C-terminal signature 290 300 2.3E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB29_03052 404f78d9eb1f2c94ef45aecdcda99548 350 PRINTS PR00344 Bacterial sensor protein C-terminal signature 330 343 2.3E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB29_03052 404f78d9eb1f2c94ef45aecdcda99548 350 PRINTS PR00344 Bacterial sensor protein C-terminal signature 272 286 2.3E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB29_01517 b8f39a5d56d85947066d710a8f67318d 249 Gene3D G3DSA:3.30.450.40 74 249 7.3E-57 T 14-10-2018 IPR029016 GAF-like domain superfamily DB29_01517 b8f39a5d56d85947066d710a8f67318d 249 SUPERFAMILY SSF55781 69 247 7.19E-50 T 14-10-2018 DB29_01517 b8f39a5d56d85947066d710a8f67318d 249 Gene3D G3DSA:1.10.10.10 2 73 1.7E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_01517 b8f39a5d56d85947066d710a8f67318d 249 Pfam PF09339 IclR helix-turn-helix domain 5 53 4.6E-10 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 DB29_01517 b8f39a5d56d85947066d710a8f67318d 249 SUPERFAMILY SSF46785 3 76 5.25E-13 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_01517 b8f39a5d56d85947066d710a8f67318d 249 SMART SM00346 3 92 2.5E-14 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 DB29_01517 b8f39a5d56d85947066d710a8f67318d 249 Pfam PF01614 Bacterial transcriptional regulator 122 243 1.3E-36 T 14-10-2018 IPR014757 Transcription regulator IclR, C-terminal DB29_02175 c5cd25818f11fe8941906d6a7b50b238 226 Pfam PF00072 Response regulator receiver domain 6 115 2.0E-33 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DB29_02175 c5cd25818f11fe8941906d6a7b50b238 226 Gene3D G3DSA:3.40.50.2300 2 127 1.4E-41 T 14-10-2018 DB29_02175 c5cd25818f11fe8941906d6a7b50b238 226 SMART SM00862 149 222 4.8E-26 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DB29_02175 c5cd25818f11fe8941906d6a7b50b238 226 SMART SM00448 4 114 6.4E-47 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DB29_02175 c5cd25818f11fe8941906d6a7b50b238 226 SUPERFAMILY SSF52172 2 182 2.56E-44 T 14-10-2018 IPR011006 CheY-like superfamily DB29_02175 c5cd25818f11fe8941906d6a7b50b238 226 Gene3D G3DSA:1.10.10.10 128 225 3.4E-31 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_02175 c5cd25818f11fe8941906d6a7b50b238 226 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 222 8.6E-24 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DB29_02347 ff2397e46b2f70c48c302c1cecc6f019 288 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 287 35.188 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DB29_02347 ff2397e46b2f70c48c302c1cecc6f019 288 Gene3D G3DSA:3.40.1380.10 61 206 5.3E-102 T 14-10-2018 DB29_02347 ff2397e46b2f70c48c302c1cecc6f019 288 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 287 2.8E-108 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DB29_02347 ff2397e46b2f70c48c302c1cecc6f019 288 PRINTS PR00126 ATP synthase gamma subunit signature 166 183 1.8E-36 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DB29_02347 ff2397e46b2f70c48c302c1cecc6f019 288 PRINTS PR00126 ATP synthase gamma subunit signature 73 92 1.8E-36 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DB29_02347 ff2397e46b2f70c48c302c1cecc6f019 288 PRINTS PR00126 ATP synthase gamma subunit signature 234 253 1.8E-36 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DB29_02347 ff2397e46b2f70c48c302c1cecc6f019 288 PRINTS PR00126 ATP synthase gamma subunit signature 265 286 1.8E-36 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DB29_02347 ff2397e46b2f70c48c302c1cecc6f019 288 Pfam PF00231 ATP synthase 3 287 1.2E-96 T 14-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DB29_02347 ff2397e46b2f70c48c302c1cecc6f019 288 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 273 286 - T 14-10-2018 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DB29_02347 ff2397e46b2f70c48c302c1cecc6f019 288 SUPERFAMILY SSF52943 2 287 2.62E-89 T 14-10-2018 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DB29_02347 ff2397e46b2f70c48c302c1cecc6f019 288 Gene3D G3DSA:1.10.287.80 6 283 5.3E-102 T 14-10-2018 DB29_00952 eefa241b5f2ba2c6ed8340a64bfb5c7d 431 Gene3D G3DSA:3.40.50.20 1 93 3.1E-36 T 14-10-2018 DB29_00952 eefa241b5f2ba2c6ed8340a64bfb5c7d 431 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 100 7.2E-34 T 14-10-2018 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 DB29_00952 eefa241b5f2ba2c6ed8340a64bfb5c7d 431 Gene3D G3DSA:3.30.1490.20 121 188 4.5E-25 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 DB29_00952 eefa241b5f2ba2c6ed8340a64bfb5c7d 431 Gene3D G3DSA:3.30.470.20 189 324 3.7E-58 T 14-10-2018 DB29_00952 eefa241b5f2ba2c6ed8340a64bfb5c7d 431 SMART SM01209 101 293 7.8E-129 T 14-10-2018 DB29_00952 eefa241b5f2ba2c6ed8340a64bfb5c7d 431 SMART SM01210 325 417 4.8E-39 T 14-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 DB29_00952 eefa241b5f2ba2c6ed8340a64bfb5c7d 431 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 417 3.2E-163 T 14-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 DB29_00952 eefa241b5f2ba2c6ed8340a64bfb5c7d 431 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 101 293 5.8E-80 T 14-10-2018 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 DB29_00952 eefa241b5f2ba2c6ed8340a64bfb5c7d 431 SUPERFAMILY SSF51246 324 417 3.77E-26 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 DB29_00952 eefa241b5f2ba2c6ed8340a64bfb5c7d 431 Gene3D G3DSA:3.90.600.10 325 429 2.3E-31 T 14-10-2018 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 DB29_00952 eefa241b5f2ba2c6ed8340a64bfb5c7d 431 SUPERFAMILY SSF52440 1 101 8.06E-35 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily DB29_00952 eefa241b5f2ba2c6ed8340a64bfb5c7d 431 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 417 42.346 T 14-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 DB29_00952 eefa241b5f2ba2c6ed8340a64bfb5c7d 431 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 327 414 1.2E-24 T 14-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 DB29_00952 eefa241b5f2ba2c6ed8340a64bfb5c7d 431 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 287 294 - T 14-10-2018 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 DB29_00952 eefa241b5f2ba2c6ed8340a64bfb5c7d 431 SUPERFAMILY SSF56059 102 320 4.95E-59 T 14-10-2018 DB29_00978 ffb7b571a4398a4e67f074a9268c213f 665 Gene3D G3DSA:3.40.50.300 421 664 7.5E-88 T 14-10-2018 DB29_00978 ffb7b571a4398a4e67f074a9268c213f 665 Gene3D G3DSA:1.20.1560.10 131 409 1.1E-67 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DB29_00978 ffb7b571a4398a4e67f074a9268c213f 665 SUPERFAMILY SSF90123 4 414 1.57E-72 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DB29_00978 ffb7b571a4398a4e67f074a9268c213f 665 Pfam PF00664 ABC transporter transmembrane region 148 381 1.8E-42 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 DB29_00978 ffb7b571a4398a4e67f074a9268c213f 665 SUPERFAMILY SSF52540 418 660 4.15E-86 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_00978 ffb7b571a4398a4e67f074a9268c213f 665 Pfam PF00005 ABC transporter 441 590 5.0E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB29_00978 ffb7b571a4398a4e67f074a9268c213f 665 SMART SM00382 450 642 2.2E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_00978 ffb7b571a4398a4e67f074a9268c213f 665 ProSitePatterns PS00211 ABC transporters family signature. 562 576 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB29_03983 10496e9172ea49747344152cd956fd96 76 Hamap MF_00088 UPF0109 protein . 1 75 22.942 T 14-10-2018 IPR020627 Uncharacterised protein family UPF0109 DB29_03983 10496e9172ea49747344152cd956fd96 76 Pfam PF13083 KH domain 2 74 1.2E-24 T 14-10-2018 DB29_03983 10496e9172ea49747344152cd956fd96 76 SUPERFAMILY SSF54814 12 59 6.54E-9 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 DB29_03983 10496e9172ea49747344152cd956fd96 76 Gene3D G3DSA:3.30.300.20 5 70 1.7E-5 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta DB29_04262 e33de0891e5c3c6fb6acc259a3bd759c 106 Pfam PF03551 Transcriptional regulator PadR-like family 16 87 8.5E-21 T 14-10-2018 IPR005149 Transcription regulator PadR, N-terminal DB29_04262 e33de0891e5c3c6fb6acc259a3bd759c 106 SUPERFAMILY SSF46785 6 105 8.68E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_04262 e33de0891e5c3c6fb6acc259a3bd759c 106 Gene3D G3DSA:1.10.10.10 1 106 5.2E-34 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_02705 61ec33d2e0f7272b347ab2ba877a4eb2 68 Gene3D G3DSA:1.10.260.40 3 68 1.5E-10 T 14-10-2018 DB29_02705 61ec33d2e0f7272b347ab2ba877a4eb2 68 SUPERFAMILY SSF47413 5 59 5.0E-9 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DB29_02705 61ec33d2e0f7272b347ab2ba877a4eb2 68 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 8 67 1.4E-10 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DB29_00344 6557e68e48e14b147bef67834b413fa9 445 Gene3D G3DSA:3.40.50.12160 3 134 3.2E-25 T 14-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily DB29_00344 6557e68e48e14b147bef67834b413fa9 445 SUPERFAMILY SSF102114 124 364 9.16E-58 T 14-10-2018 DB29_00344 6557e68e48e14b147bef67834b413fa9 445 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 147 167 - T 14-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 DB29_00344 6557e68e48e14b147bef67834b413fa9 445 Pfam PF00919 Uncharacterized protein family UPF0004 4 98 5.1E-27 T 14-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 DB29_00344 6557e68e48e14b147bef67834b413fa9 445 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 3 431 6.2E-152 T 14-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 DB29_00344 6557e68e48e14b147bef67834b413fa9 445 TIGRFAM TIGR01579 MiaB-like-C: MiaB-like tRNA modifying enzyme 6 422 6.5E-146 T 14-10-2018 IPR006467 MiaB-like tRNA modifying enzyme GO:0016740 DB29_00344 6557e68e48e14b147bef67834b413fa9 445 Gene3D G3DSA:3.80.30.20 140 374 2.0E-88 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe DB29_00344 6557e68e48e14b147bef67834b413fa9 445 SMART SM00729 143 360 2.0E-60 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 DB29_00344 6557e68e48e14b147bef67834b413fa9 445 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 6 426 1.0E-109 T 14-10-2018 DB29_00344 6557e68e48e14b147bef67834b413fa9 445 Pfam PF04055 Radical SAM superfamily 149 318 8.8E-30 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 DB29_00173 29c50e4dc1c864331737940ffdfe6b21 519 SUPERFAMILY SSF53720 24 512 4.06E-165 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 DB29_00173 29c50e4dc1c864331737940ffdfe6b21 519 Gene3D G3DSA:3.40.309.10 279 477 1.3E-164 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 DB29_00173 29c50e4dc1c864331737940ffdfe6b21 519 Gene3D G3DSA:3.40.605.10 36 505 1.3E-164 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 DB29_00173 29c50e4dc1c864331737940ffdfe6b21 519 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 307 318 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 DB29_00173 29c50e4dc1c864331737940ffdfe6b21 519 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 274 281 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 DB29_00173 29c50e4dc1c864331737940ffdfe6b21 519 Pfam PF00171 Aldehyde dehydrogenase family 40 506 6.6E-167 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 DB29_01111 760b2320e6c3d086a0cac1704e6e57c4 267 Gene3D G3DSA:1.10.8.50 130 267 3.6E-35 T 14-10-2018 DB29_01111 760b2320e6c3d086a0cac1704e6e57c4 267 SUPERFAMILY SSF57716 217 266 2.45E-12 T 14-10-2018 DB29_01111 760b2320e6c3d086a0cac1704e6e57c4 267 Gene3D G3DSA:3.20.190.10 2 128 2.1E-25 T 14-10-2018 IPR035937 MutM-like, N-terminal DB29_01111 760b2320e6c3d086a0cac1704e6e57c4 267 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 130 211 3.0E-17 T 14-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 DB29_01111 760b2320e6c3d086a0cac1704e6e57c4 267 SUPERFAMILY SSF46946 131 219 1.83E-20 T 14-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 DB29_01111 760b2320e6c3d086a0cac1704e6e57c4 267 SMART SM00898 2 115 1.6E-26 T 14-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 DB29_01111 760b2320e6c3d086a0cac1704e6e57c4 267 SUPERFAMILY SSF81624 2 135 1.96E-27 T 14-10-2018 IPR035937 MutM-like, N-terminal DB29_01111 760b2320e6c3d086a0cac1704e6e57c4 267 SMART SM01232 129 219 7.9E-25 T 14-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 DB29_01111 760b2320e6c3d086a0cac1704e6e57c4 267 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 110 6.3E-21 T 14-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 DB29_01111 760b2320e6c3d086a0cac1704e6e57c4 267 Pfam PF06827 Zinc finger found in FPG and IleRS 239 267 6.7E-5 T 14-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 DB29_03553 8dab33859fb1ef50892d056fe79df101 643 Gene3D G3DSA:3.30.930.10 227 540 1.1E-115 T 14-10-2018 DB29_03553 8dab33859fb1ef50892d056fe79df101 643 SUPERFAMILY SSF55186 67 243 1.7E-67 T 14-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 DB29_03553 8dab33859fb1ef50892d056fe79df101 643 Gene3D G3DSA:3.10.20.30 6 66 1.9E-21 T 14-10-2018 IPR012675 Beta-grasp domain superfamily DB29_03553 8dab33859fb1ef50892d056fe79df101 643 Gene3D G3DSA:3.40.50.800 541 643 2.2E-31 T 14-10-2018 IPR036621 Anticodon-binding domain superfamily DB29_03553 8dab33859fb1ef50892d056fe79df101 643 SUPERFAMILY SSF81271 8 63 1.22E-13 T 14-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 DB29_03553 8dab33859fb1ef50892d056fe79df101 643 Gene3D G3DSA:3.30.54.20 133 189 5.1E-68 T 14-10-2018 DB29_03553 8dab33859fb1ef50892d056fe79df101 643 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 75 640 3.6E-240 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 DB29_03553 8dab33859fb1ef50892d056fe79df101 643 SUPERFAMILY SSF55681 245 533 4.58E-98 T 14-10-2018 DB29_03553 8dab33859fb1ef50892d056fe79df101 643 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 327 537 2.4E-34 T 14-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 DB29_03553 8dab33859fb1ef50892d056fe79df101 643 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 172 221 1.5E-16 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 DB29_03553 8dab33859fb1ef50892d056fe79df101 643 PRINTS PR01047 Threonyl-tRNA synthetase signature 542 554 1.9E-47 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 DB29_03553 8dab33859fb1ef50892d056fe79df101 643 PRINTS PR01047 Threonyl-tRNA synthetase signature 366 389 1.9E-47 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 DB29_03553 8dab33859fb1ef50892d056fe79df101 643 PRINTS PR01047 Threonyl-tRNA synthetase signature 333 361 1.9E-47 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 DB29_03553 8dab33859fb1ef50892d056fe79df101 643 PRINTS PR01047 Threonyl-tRNA synthetase signature 472 500 1.9E-47 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 DB29_03553 8dab33859fb1ef50892d056fe79df101 643 PRINTS PR01047 Threonyl-tRNA synthetase signature 515 528 1.9E-47 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 DB29_03553 8dab33859fb1ef50892d056fe79df101 643 Pfam PF03129 Anticodon binding domain 549 637 3.8E-21 T 14-10-2018 IPR004154 Anticodon-binding DB29_03553 8dab33859fb1ef50892d056fe79df101 643 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 69 643 35.504 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 DB29_03553 8dab33859fb1ef50892d056fe79df101 643 Pfam PF02824 TGS domain 5 63 7.3E-10 T 14-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 DB29_03553 8dab33859fb1ef50892d056fe79df101 643 SUPERFAMILY SSF52954 535 639 1.37E-29 T 14-10-2018 DB29_03553 8dab33859fb1ef50892d056fe79df101 643 SMART SM00863 172 221 1.6E-24 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 DB29_03553 8dab33859fb1ef50892d056fe79df101 643 Gene3D G3DSA:3.30.980.10 72 224 5.1E-68 T 14-10-2018 DB29_03399 f7fa9ea9ecd7279ee0a166eb36b66048 368 Gene3D G3DSA:3.30.470.20 129 353 5.4E-88 T 14-10-2018 DB29_03399 f7fa9ea9ecd7279ee0a166eb36b66048 368 Pfam PF07478 D-ala D-ala ligase C-terminus 147 348 2.8E-78 T 14-10-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DB29_03399 f7fa9ea9ecd7279ee0a166eb36b66048 368 SUPERFAMILY SSF52440 3 139 1.06E-36 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily DB29_03399 f7fa9ea9ecd7279ee0a166eb36b66048 368 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 293 321 - T 14-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DB29_03399 f7fa9ea9ecd7279ee0a166eb36b66048 368 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 107 118 - T 14-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DB29_03399 f7fa9ea9ecd7279ee0a166eb36b66048 368 Pfam PF01820 D-ala D-ala ligase N-terminus 5 130 2.2E-31 T 14-10-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DB29_03399 f7fa9ea9ecd7279ee0a166eb36b66048 368 SUPERFAMILY SSF56059 140 354 4.77E-64 T 14-10-2018 DB29_03399 f7fa9ea9ecd7279ee0a166eb36b66048 368 PIRSF PIRSF039102 1 359 1.8E-133 T 14-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DB29_03399 f7fa9ea9ecd7279ee0a166eb36b66048 368 Gene3D G3DSA:3.40.50.20 1 128 8.9E-44 T 14-10-2018 DB29_03399 f7fa9ea9ecd7279ee0a166eb36b66048 368 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 5 350 1.3E-113 T 14-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DB29_03399 f7fa9ea9ecd7279ee0a166eb36b66048 368 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 4 351 43.224 T 14-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DB29_03399 f7fa9ea9ecd7279ee0a166eb36b66048 368 Gene3D G3DSA:3.30.1490.20 155 224 5.4E-88 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 DB29_00367 a8f1945f8804b6dd50c6c6146a29a13b 192 Pfam PF01467 Cytidylyltransferase-like 6 162 5.2E-32 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 DB29_00367 a8f1945f8804b6dd50c6c6146a29a13b 192 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 2 188 31.037 T 14-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 DB29_00367 a8f1945f8804b6dd50c6c6146a29a13b 192 SUPERFAMILY SSF52374 2 190 1.38E-52 T 14-10-2018 DB29_00367 a8f1945f8804b6dd50c6c6146a29a13b 192 Gene3D G3DSA:3.40.50.620 1 188 6.4E-64 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DB29_00367 a8f1945f8804b6dd50c6c6146a29a13b 192 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 4 68 7.0E-13 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 DB29_00367 a8f1945f8804b6dd50c6c6146a29a13b 192 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 6 187 1.0E-53 T 14-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 DB29_00823 5f03caf801d213a149ef2daacba06c39 310 SMART SM00387 198 310 1.1E-30 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DB29_00823 5f03caf801d213a149ef2daacba06c39 310 PRINTS PR00344 Bacterial sensor protein C-terminal signature 253 263 2.9E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB29_00823 5f03caf801d213a149ef2daacba06c39 310 PRINTS PR00344 Bacterial sensor protein C-terminal signature 270 288 2.9E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB29_00823 5f03caf801d213a149ef2daacba06c39 310 PRINTS PR00344 Bacterial sensor protein C-terminal signature 235 249 2.9E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB29_00823 5f03caf801d213a149ef2daacba06c39 310 SMART SM00388 85 152 2.0E-14 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DB29_00823 5f03caf801d213a149ef2daacba06c39 310 Pfam PF00512 His Kinase A (phospho-acceptor) domain 86 152 3.1E-11 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DB29_00823 5f03caf801d213a149ef2daacba06c39 310 SUPERFAMILY SSF55874 141 307 7.6E-38 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB29_00823 5f03caf801d213a149ef2daacba06c39 310 Gene3D G3DSA:1.10.287.130 76 156 2.4E-13 T 14-10-2018 DB29_00823 5f03caf801d213a149ef2daacba06c39 310 SUPERFAMILY SSF47384 74 153 1.67E-13 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DB29_00823 5f03caf801d213a149ef2daacba06c39 310 Gene3D G3DSA:3.30.565.10 161 309 2.1E-35 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB29_00823 5f03caf801d213a149ef2daacba06c39 310 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 199 307 8.1E-22 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DB29_00816 af5c9def2f2af2975627770275be5073 233 SUPERFAMILY SSF52172 1 192 1.34E-44 T 14-10-2018 IPR011006 CheY-like superfamily DB29_00816 af5c9def2f2af2975627770275be5073 233 Gene3D G3DSA:3.40.50.2300 1 130 1.5E-40 T 14-10-2018 DB29_00816 af5c9def2f2af2975627770275be5073 233 Gene3D G3DSA:1.10.10.10 131 233 2.4E-35 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_00816 af5c9def2f2af2975627770275be5073 233 Pfam PF00486 Transcriptional regulatory protein, C terminal 155 231 1.3E-27 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DB29_00816 af5c9def2f2af2975627770275be5073 233 SMART SM00862 155 231 1.1E-25 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DB29_00816 af5c9def2f2af2975627770275be5073 233 SMART SM00448 4 114 4.4E-47 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DB29_00816 af5c9def2f2af2975627770275be5073 233 Pfam PF00072 Response regulator receiver domain 6 115 1.9E-33 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DB29_03927 35eaa6b10bdcbc1a1c926eb3dd7afb3e 155 Pfam PF04472 Cell division protein SepF 69 139 5.0E-29 T 14-10-2018 IPR007561 Cell division protein SepF/SepF-related GO:0090529 DB29_03927 35eaa6b10bdcbc1a1c926eb3dd7afb3e 155 Gene3D G3DSA:3.30.110.150 61 153 8.6E-33 T 14-10-2018 IPR038594 SepF-like superfamily DB29_03927 35eaa6b10bdcbc1a1c926eb3dd7afb3e 155 Hamap MF_01197 Cell division protein SepF [sepF]. 1 147 20.092 T 14-10-2018 IPR023052 Cell division protein SepF GO:0090529 DB29_00893 2fb708e916943b4cba1f7c047caebffe 687 Pfam PF00874 PRD domain 303 392 1.5E-17 T 14-10-2018 IPR011608 PRD domain GO:0006355 DB29_00893 2fb708e916943b4cba1f7c047caebffe 687 Gene3D G3DSA:1.10.1790.10 297 395 1.1E-15 T 14-10-2018 DB29_00893 2fb708e916943b4cba1f7c047caebffe 687 Gene3D G3DSA:3.40.930.10 537 687 1.5E-52 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 DB29_00893 2fb708e916943b4cba1f7c047caebffe 687 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 541 680 3.9E-33 T 14-10-2018 IPR002178 PTS EIIA type-2 domain DB29_00893 2fb708e916943b4cba1f7c047caebffe 687 SUPERFAMILY SSF52794 407 487 4.55E-10 T 14-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 DB29_00893 2fb708e916943b4cba1f7c047caebffe 687 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 588 604 - T 14-10-2018 IPR002178 PTS EIIA type-2 domain DB29_00893 2fb708e916943b4cba1f7c047caebffe 687 SUPERFAMILY SSF63520 295 397 7.72E-21 T 14-10-2018 IPR036634 PRD domain superfamily GO:0006355 DB29_00893 2fb708e916943b4cba1f7c047caebffe 687 Gene3D G3DSA:3.40.50.2300 405 488 3.6E-11 T 14-10-2018 DB29_00893 2fb708e916943b4cba1f7c047caebffe 687 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 406 461 6.2E-5 T 14-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 DB29_00893 2fb708e916943b4cba1f7c047caebffe 687 SUPERFAMILY SSF55804 537 680 3.79E-38 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 DB29_00082 8d7fad26e18866d727fe6576284e7449 365 SUPERFAMILY SSF51735 6 170 3.51E-44 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_00082 8d7fad26e18866d727fe6576284e7449 365 Pfam PF01842 ACT domain 296 344 4.4E-9 T 14-10-2018 IPR002912 ACT domain DB29_00082 8d7fad26e18866d727fe6576284e7449 365 Gene3D G3DSA:3.30.70.260 296 362 1.7E-6 T 14-10-2018 DB29_00082 8d7fad26e18866d727fe6576284e7449 365 Gene3D G3DSA:3.40.50.720 1 180 5.2E-52 T 14-10-2018 DB29_00082 8d7fad26e18866d727fe6576284e7449 365 SUPERFAMILY SSF48179 175 283 6.91E-32 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 DB29_00082 8d7fad26e18866d727fe6576284e7449 365 Gene3D G3DSA:1.10.3660.10 181 295 2.3E-35 T 14-10-2018 DB29_00082 8d7fad26e18866d727fe6576284e7449 365 SUPERFAMILY SSF55021 294 356 4.31E-8 T 14-10-2018 DB29_00082 8d7fad26e18866d727fe6576284e7449 365 Pfam PF02153 Prephenate dehydrogenase 18 275 1.6E-76 T 14-10-2018 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 DB29_01448 70770767ce0725414c1e6548faabf3d4 349 SUPERFAMILY SSF160991 5 331 2.22E-82 T 14-10-2018 DB29_01448 70770767ce0725414c1e6548faabf3d4 349 Gene3D G3DSA:3.40.1610.10 3 223 1.4E-24 T 14-10-2018 IPR027479 Protein of unknown function DUF917, N-terminal DB29_01448 70770767ce0725414c1e6548faabf3d4 349 Pfam PF06032 Protein of unknown function (DUF917) 11 327 2.7E-60 T 14-10-2018 IPR010318 Protein of unknown function DUF917 DB29_02126 d89dfa7dd1f1f2ba698a60d78a15c6c4 207 SUPERFAMILY SSF160904 10 204 1.7E-43 T 14-10-2018 DB29_02126 d89dfa7dd1f1f2ba698a60d78a15c6c4 207 Pfam PF07336 Putative stress-induced transcription regulator 16 157 4.9E-17 T 14-10-2018 IPR010852 Putative stress-induced transcription regulator DB29_02126 d89dfa7dd1f1f2ba698a60d78a15c6c4 207 Pfam PF11706 CGNR zinc finger 163 205 4.9E-20 T 14-10-2018 IPR021005 Zinc finger, CGNR DB29_02126 d89dfa7dd1f1f2ba698a60d78a15c6c4 207 Gene3D G3DSA:1.10.3300.10 6 207 6.5E-26 T 14-10-2018 IPR023286 ABATE domain superfamily DB29_01253 3dff166e7ed15cc5fb70ebd6853ed6ed 795 Gene3D G3DSA:3.50.30.30 405 520 2.8E-29 T 14-10-2018 DB29_01253 3dff166e7ed15cc5fb70ebd6853ed6ed 795 SUPERFAMILY SSF52025 413 511 2.22E-19 T 14-10-2018 DB29_01253 3dff166e7ed15cc5fb70ebd6853ed6ed 795 Pfam PF05922 Peptidase inhibitor I9 60 156 1.1E-7 T 14-10-2018 IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 Reactome: R-HSA-381426|Reactome: R-HSA-8866427|Reactome: R-HSA-8957275|Reactome: R-HSA-8964038 DB29_01253 3dff166e7ed15cc5fb70ebd6853ed6ed 795 Pfam PF00082 Subtilase family 193 629 1.2E-61 T 14-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 DB29_01253 3dff166e7ed15cc5fb70ebd6853ed6ed 795 PRINTS PR00723 Subtilisin serine protease family (S8) signature 252 265 5.1E-21 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related DB29_01253 3dff166e7ed15cc5fb70ebd6853ed6ed 795 PRINTS PR00723 Subtilisin serine protease family (S8) signature 193 212 5.1E-21 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related DB29_01253 3dff166e7ed15cc5fb70ebd6853ed6ed 795 PRINTS PR00723 Subtilisin serine protease family (S8) signature 578 594 5.1E-21 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related DB29_01253 3dff166e7ed15cc5fb70ebd6853ed6ed 795 Pfam PF02225 PA domain 418 502 6.6E-15 T 14-10-2018 IPR003137 PA domain DB29_01253 3dff166e7ed15cc5fb70ebd6853ed6ed 795 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 579 589 - T 14-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site DB29_01253 3dff166e7ed15cc5fb70ebd6853ed6ed 795 Gene3D G3DSA:3.40.50.200 170 404 7.2E-54 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 DB29_01253 3dff166e7ed15cc5fb70ebd6853ed6ed 795 SUPERFAMILY SSF52743 179 639 8.25E-80 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 DB29_01253 3dff166e7ed15cc5fb70ebd6853ed6ed 795 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 198 209 - T 14-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site DB29_01253 3dff166e7ed15cc5fb70ebd6853ed6ed 795 Gene3D G3DSA:3.40.50.200 521 655 3.8E-26 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 DB29_01253 3dff166e7ed15cc5fb70ebd6853ed6ed 795 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 256 266 - T 14-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site DB29_03908 5a340cd65e0d20006b9171020a083c8e 314 Pfam PF01795 MraW methylase family 2 309 3.6E-130 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 DB29_03908 5a340cd65e0d20006b9171020a083c8e 314 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 2 309 2.1E-122 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 DB29_03908 5a340cd65e0d20006b9171020a083c8e 314 PIRSF PIRSF004486 1 311 1.5E-110 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 DB29_03908 5a340cd65e0d20006b9171020a083c8e 314 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 4 310 38.482 T 14-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 DB29_03908 5a340cd65e0d20006b9171020a083c8e 314 SUPERFAMILY SSF81799 113 214 2.22E-35 T 14-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 DB29_03908 5a340cd65e0d20006b9171020a083c8e 314 Gene3D G3DSA:3.40.50.150 4 306 3.0E-105 T 14-10-2018 DB29_03908 5a340cd65e0d20006b9171020a083c8e 314 Gene3D G3DSA:1.10.150.170 111 216 3.0E-105 T 14-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 DB29_03908 5a340cd65e0d20006b9171020a083c8e 314 SUPERFAMILY SSF53335 4 309 4.46E-46 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DB29_01899 eef004b3df711f1de11404e3a38724d5 276 PIRSF PIRSF002158 3 276 1.5E-100 T 14-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DB29_01899 eef004b3df711f1de11404e3a38724d5 276 SUPERFAMILY SSF50104 127 273 2.17E-62 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily DB29_01899 eef004b3df711f1de11404e3a38724d5 276 Gene3D G3DSA:4.10.950.10 197 276 2.5E-36 T 14-10-2018 IPR014726 Ribosomal protein L2, domain 3 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB29_01899 eef004b3df711f1de11404e3a38724d5 276 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 276 1.1E-139 T 14-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 DB29_01899 eef004b3df711f1de11404e3a38724d5 276 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 118 2.3E-34 T 14-10-2018 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 DB29_01899 eef004b3df711f1de11404e3a38724d5 276 Gene3D G3DSA:2.40.50.140 1 114 3.2E-49 T 14-10-2018 DB29_01899 eef004b3df711f1de11404e3a38724d5 276 SMART SM01382 124 253 3.8E-95 T 14-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 DB29_01899 eef004b3df711f1de11404e3a38724d5 276 SUPERFAMILY SSF50249 2 125 4.46E-53 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DB29_01899 eef004b3df711f1de11404e3a38724d5 276 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 14-10-2018 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB29_01899 eef004b3df711f1de11404e3a38724d5 276 SMART SM01383 42 118 3.3E-46 T 14-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DB29_01899 eef004b3df711f1de11404e3a38724d5 276 Gene3D G3DSA:2.30.30.30 118 196 6.7E-35 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 DB29_01899 eef004b3df711f1de11404e3a38724d5 276 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 125 251 2.9E-57 T 14-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 DB29_01899 eef004b3df711f1de11404e3a38724d5 276 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 275 50.268 T 14-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 DB29_01260 4f57856e59c2b5ed38a4fbef81872360 384 Gene3D G3DSA:3.90.1510.10 43 277 7.8E-136 T 14-10-2018 IPR018193 Glycerate kinase, flavodoxin-like fold GO:0008887|GO:0031388 DB29_01260 4f57856e59c2b5ed38a4fbef81872360 384 TIGRFAM TIGR00045 TIGR00045: glycerate kinase 3 376 1.3E-154 T 14-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 DB29_01260 4f57856e59c2b5ed38a4fbef81872360 384 SUPERFAMILY SSF110738 3 376 8.24E-133 T 14-10-2018 IPR036129 Glycerate kinase superfamily GO:0008887|GO:0031388 DB29_01260 4f57856e59c2b5ed38a4fbef81872360 384 PIRSF PIRSF006078 2 378 2.5E-131 T 14-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 DB29_01260 4f57856e59c2b5ed38a4fbef81872360 384 Gene3D G3DSA:3.40.50.10350 3 363 7.8E-136 T 14-10-2018 IPR018197 Glycerate kinase, restriction-enzyme-like fold DB29_01260 4f57856e59c2b5ed38a4fbef81872360 384 Pfam PF02595 Glycerate kinase family 5 374 1.7E-143 T 14-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 DB29_03699 f9e50f595bbf2b7cd1671ca42dec2d44 257 PRINTS PR00474 Glutamate 5-kinase family signature 157 184 9.6E-5 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 DB29_03699 f9e50f595bbf2b7cd1671ca42dec2d44 257 PRINTS PR00474 Glutamate 5-kinase family signature 31 45 9.6E-5 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 DB29_03699 f9e50f595bbf2b7cd1671ca42dec2d44 257 Gene3D G3DSA:3.40.1160.10 2 239 8.6E-71 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily DB29_03699 f9e50f595bbf2b7cd1671ca42dec2d44 257 SUPERFAMILY SSF53633 1 248 1.96E-61 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily DB29_03699 f9e50f595bbf2b7cd1671ca42dec2d44 257 PIRSF PIRSF000728 1 252 2.5E-87 T 14-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 DB29_03699 f9e50f595bbf2b7cd1671ca42dec2d44 257 TIGRFAM TIGR00761 argB: acetylglutamate kinase 3 231 1.6E-71 T 14-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 DB29_03699 f9e50f595bbf2b7cd1671ca42dec2d44 257 Hamap MF_00082 Acetylglutamate kinase [argB]. 1 249 42.88 T 14-10-2018 IPR037528 Acetylglutamate kinase ArgB GO:0003991|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 DB29_03699 f9e50f595bbf2b7cd1671ca42dec2d44 257 Pfam PF00696 Amino acid kinase family 3 233 4.5E-40 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 DB29_04210 9b9769c2e21a91711b3aacd3ae3f8e53 143 SUPERFAMILY SSF50249 1 143 5.14E-52 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DB29_04210 9b9769c2e21a91711b3aacd3ae3f8e53 143 Gene3D G3DSA:2.40.50.140 1 112 2.2E-46 T 14-10-2018 DB29_04210 9b9769c2e21a91711b3aacd3ae3f8e53 143 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 1 130 7.2E-44 T 14-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 DB29_04210 9b9769c2e21a91711b3aacd3ae3f8e53 143 PIRSF PIRSF002070 1 143 2.7E-40 T 14-10-2018 DB29_04210 9b9769c2e21a91711b3aacd3ae3f8e53 143 Hamap MF_00984 Single-stranded DNA-binding protein. 2 107 36.158 T 14-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 DB29_04210 9b9769c2e21a91711b3aacd3ae3f8e53 143 Pfam PF00436 Single-strand binding protein family 2 103 6.3E-38 T 14-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 DB29_03342 8e7a9558cb1d903568b1a35f1e8cfde7 127 Pfam PF16888 Domain of unknown function (DUF5082) 8 114 4.1E-14 T 14-10-2018 IPR031681 Protein of unknown function DUF5082 DB29_03342 8e7a9558cb1d903568b1a35f1e8cfde7 127 ProDom PD338809 BH2346 YXIB BH4015 BH0976 PREFOLDIN 22 127 1.0E-57 T 14-10-2018 DB29_02513 787d4b589e357261ee9ace85e3f22f4f 415 Pfam PF01943 Polysaccharide biosynthesis protein 8 270 1.6E-33 T 14-10-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 DB29_00348 84564b72256c08e083c96744e3ecec63 611 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 DB29_00348 84564b72256c08e083c96744e3ecec63 611 Gene3D G3DSA:3.90.640.10 197 278 2.3E-154 T 14-10-2018 DB29_00348 84564b72256c08e083c96744e3ecec63 611 SUPERFAMILY SSF100934 476 579 6.67E-15 T 14-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 DB29_00348 84564b72256c08e083c96744e3ecec63 611 Gene3D G3DSA:2.60.34.10 352 492 2.0E-67 T 14-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 DB29_00348 84564b72256c08e083c96744e3ecec63 611 SUPERFAMILY SSF53067 160 351 1.54E-68 T 14-10-2018 DB29_00348 84564b72256c08e083c96744e3ecec63 611 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 605 37.876 T 14-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 DB29_00348 84564b72256c08e083c96744e3ecec63 611 SUPERFAMILY SSF100920 353 509 2.62E-64 T 14-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 DB29_00348 84564b72256c08e083c96744e3ecec63 611 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 306 320 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 DB29_00348 84564b72256c08e083c96744e3ecec63 611 Gene3D G3DSA:3.30.420.40 158 336 2.3E-154 T 14-10-2018 DB29_00348 84564b72256c08e083c96744e3ecec63 611 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 572 3.2E-291 T 14-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 DB29_00348 84564b72256c08e083c96744e3ecec63 611 SUPERFAMILY SSF53067 1 157 1.23E-58 T 14-10-2018 DB29_00348 84564b72256c08e083c96744e3ecec63 611 Gene3D G3DSA:3.30.420.40 5 345 2.3E-154 T 14-10-2018 DB29_00348 84564b72256c08e083c96744e3ecec63 611 Gene3D G3DSA:1.20.1270.10 493 576 5.6E-22 T 14-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 DB29_00348 84564b72256c08e083c96744e3ecec63 611 PRINTS PR00301 70kDa heat shock protein signature 53 61 2.8E-82 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DB29_00348 84564b72256c08e083c96744e3ecec63 611 PRINTS PR00301 70kDa heat shock protein signature 334 354 2.8E-82 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DB29_00348 84564b72256c08e083c96744e3ecec63 611 PRINTS PR00301 70kDa heat shock protein signature 31 43 2.8E-82 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DB29_00348 84564b72256c08e083c96744e3ecec63 611 PRINTS PR00301 70kDa heat shock protein signature 112 132 2.8E-82 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DB29_00348 84564b72256c08e083c96744e3ecec63 611 PRINTS PR00301 70kDa heat shock protein signature 438 454 2.8E-82 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DB29_00348 84564b72256c08e083c96744e3ecec63 611 PRINTS PR00301 70kDa heat shock protein signature 3 16 2.8E-82 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DB29_00348 84564b72256c08e083c96744e3ecec63 611 PRINTS PR00301 70kDa heat shock protein signature 171 181 2.8E-82 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DB29_00348 84564b72256c08e083c96744e3ecec63 611 PRINTS PR00301 70kDa heat shock protein signature 303 319 2.8E-82 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DB29_00348 84564b72256c08e083c96744e3ecec63 611 PRINTS PR00301 70kDa heat shock protein signature 357 376 2.8E-82 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DB29_00348 84564b72256c08e083c96744e3ecec63 611 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 165 178 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 DB29_00348 84564b72256c08e083c96744e3ecec63 611 Pfam PF00012 Hsp70 protein 76 572 1.4E-226 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DB29_03991 f97ed1abbcf4da87528bfc30e00d2a8f 288 Gene3D G3DSA:3.40.50.300 13 180 1.8E-48 T 14-10-2018 DB29_03991 f97ed1abbcf4da87528bfc30e00d2a8f 288 PIRSF PIRSF006230 1 286 1.5E-106 T 14-10-2018 IPR016478 GTPase, MTG1 DB29_03991 f97ed1abbcf4da87528bfc30e00d2a8f 288 Gene3D G3DSA:1.10.1580.10 181 274 4.4E-29 T 14-10-2018 IPR023179 GTP-binding protein, orthogonal bundle domain superfamily DB29_03991 f97ed1abbcf4da87528bfc30e00d2a8f 288 Pfam PF01926 50S ribosome-binding GTPase 124 192 3.2E-18 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 DB29_03991 f97ed1abbcf4da87528bfc30e00d2a8f 288 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 124 144 7.5E-5 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 DB29_03991 f97ed1abbcf4da87528bfc30e00d2a8f 288 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 170 185 7.5E-5 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 DB29_03991 f97ed1abbcf4da87528bfc30e00d2a8f 288 SUPERFAMILY SSF52540 10 194 3.69E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_03991 f97ed1abbcf4da87528bfc30e00d2a8f 288 TIGRFAM TIGR03596 GTPase_YlqF: ribosome biogenesis GTP-binding protein YlqF 4 281 1.4E-116 T 14-10-2018 IPR019991 GTP-binding protein, ribosome biogenesis DB29_03620 df8bb0410f265477ad2657eece86b6c0 197 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 11 193 27.67 T 14-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 DB29_03620 df8bb0410f265477ad2657eece86b6c0 197 Pfam PF01926 50S ribosome-binding GTPase 26 143 2.2E-21 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 DB29_03620 df8bb0410f265477ad2657eece86b6c0 197 Gene3D G3DSA:3.40.50.300 1 197 1.3E-55 T 14-10-2018 DB29_03620 df8bb0410f265477ad2657eece86b6c0 197 SUPERFAMILY SSF52540 15 193 2.3E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_03620 df8bb0410f265477ad2657eece86b6c0 197 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 8 189 1.5E-71 T 14-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 DB29_00921 b89b4f25cae669371018663fa2a4055e 799 Gene3D G3DSA:1.10.439.10 31 194 6.2E-60 T 14-10-2018 IPR023343 Penicillin amidase type, domain 1 GO:0016811 DB29_00921 b89b4f25cae669371018663fa2a4055e 799 Gene3D G3DSA:3.60.20.10 260 775 3.3E-166 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DB29_00921 b89b4f25cae669371018663fa2a4055e 799 Pfam PF01804 Penicillin amidase 58 786 4.2E-219 T 14-10-2018 IPR002692 Penicillin/GL-7-ACA/AHL/aculeacin-A acylase GO:0016787|GO:0017000 DB29_00921 b89b4f25cae669371018663fa2a4055e 799 Gene3D G3DSA:1.10.1400.10 554 686 3.3E-166 T 14-10-2018 DB29_00921 b89b4f25cae669371018663fa2a4055e 799 Gene3D G3DSA:2.30.120.10 332 404 3.3E-166 T 14-10-2018 DB29_00921 b89b4f25cae669371018663fa2a4055e 799 SUPERFAMILY SSF56235 55 791 3.34E-226 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DB29_00921 b89b4f25cae669371018663fa2a4055e 799 PIRSF PIRSF001227 16 797 6.1E-208 T 14-10-2018 IPR014395 Penicillin/GL-7-ACA/AHL acylase GO:0016811 DB29_02608 d9a38e61feace4e67381c5eb068f313a 362 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 34 146 8.1E-27 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 DB29_02608 d9a38e61feace4e67381c5eb068f313a 362 Gene3D G3DSA:3.40.50.720 169 306 5.3E-95 T 14-10-2018 DB29_02608 d9a38e61feace4e67381c5eb068f313a 362 SMART SM00829 16 357 5.2E-4 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 DB29_02608 d9a38e61feace4e67381c5eb068f313a 362 SUPERFAMILY SSF51735 159 313 1.93E-37 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_02608 d9a38e61feace4e67381c5eb068f313a 362 Gene3D G3DSA:3.90.180.10 16 347 5.3E-95 T 14-10-2018 DB29_02608 d9a38e61feace4e67381c5eb068f313a 362 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 76 90 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 DB29_02608 d9a38e61feace4e67381c5eb068f313a 362 Pfam PF00107 Zinc-binding dehydrogenase 193 309 2.8E-23 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 DB29_02608 d9a38e61feace4e67381c5eb068f313a 362 SUPERFAMILY SSF50129 8 190 1.31E-46 T 14-10-2018 IPR011032 GroES-like superfamily DB29_03633 ba91e7d85b3361571f9a9037320e2559 436 Gene3D G3DSA:3.40.1190.10 1 296 1.5E-94 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 DB29_03633 ba91e7d85b3361571f9a9037320e2559 436 SUPERFAMILY SSF53244 299 431 4.21E-23 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 DB29_03633 ba91e7d85b3361571f9a9037320e2559 436 TIGRFAM TIGR01499 folC: bifunctional protein FolC 25 429 3.9E-126 T 14-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 DB29_03633 ba91e7d85b3361571f9a9037320e2559 436 SUPERFAMILY SSF53623 5 297 5.61E-92 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 DB29_03633 ba91e7d85b3361571f9a9037320e2559 436 PIRSF PIRSF001563 1 435 4.6E-159 T 14-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 DB29_03633 ba91e7d85b3361571f9a9037320e2559 436 Pfam PF02875 Mur ligase family, glutamate ligase domain 297 349 2.8E-6 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 DB29_03633 ba91e7d85b3361571f9a9037320e2559 436 ProSitePatterns PS01011 Folylpolyglutamate synthase signature 1. 45 68 - T 14-10-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 DB29_03633 ba91e7d85b3361571f9a9037320e2559 436 Pfam PF08245 Mur ligase middle domain 47 271 9.4E-12 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 DB29_03633 ba91e7d85b3361571f9a9037320e2559 436 Gene3D G3DSA:3.90.190.20 299 435 1.3E-27 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 DB29_03633 ba91e7d85b3361571f9a9037320e2559 436 ProSitePatterns PS01012 Folylpolyglutamate synthase signature 2. 144 159 - T 14-10-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 DB29_00841 5aee5f13e3aaddb295efcd75847ac5ed 370 Gene3D G3DSA:1.50.10.10 2 369 3.3E-136 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 DB29_00841 5aee5f13e3aaddb295efcd75847ac5ed 370 SUPERFAMILY SSF48208 18 365 3.69E-76 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 DB29_00841 5aee5f13e3aaddb295efcd75847ac5ed 370 Pfam PF07470 Glycosyl Hydrolase Family 88 17 365 2.5E-104 T 14-10-2018 IPR010905 Glycosyl hydrolase, family 88 DB29_03675 d101f9b7aa6c4c8563556c6f61b33b48 634 PIRSF PIRSF001589 1 630 1.4E-191 T 14-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 DB29_03675 d101f9b7aa6c4c8563556c6f61b33b48 634 Gene3D G3DSA:3.60.20.10 10 187 3.6E-64 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DB29_03675 d101f9b7aa6c4c8563556c6f61b33b48 634 Pfam PF00733 Asparagine synthase 240 608 1.0E-103 T 14-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 DB29_03675 d101f9b7aa6c4c8563556c6f61b33b48 634 Pfam PF13537 Glutamine amidotransferase domain 49 165 3.4E-48 T 14-10-2018 IPR017932 Glutamine amidotransferase type 2 domain DB29_03675 d101f9b7aa6c4c8563556c6f61b33b48 634 SUPERFAMILY SSF56235 20 220 1.54E-62 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DB29_03675 d101f9b7aa6c4c8563556c6f61b33b48 634 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 546 4.4E-159 T 14-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 DB29_03675 d101f9b7aa6c4c8563556c6f61b33b48 634 SUPERFAMILY SSF52402 230 603 2.33E-87 T 14-10-2018 DB29_03522 74a0fd9d529786ee2d860ded71c2e7bb 94 Pfam PF14007 YtpI-like protein 6 92 7.6E-28 T 14-10-2018 IPR025618 YtpI-like protein DB29_02577 1b68bdaee91f31795c565508a6669ad2 372 Gene3D G3DSA:1.10.287.130 70 200 5.3E-16 T 14-10-2018 DB29_02577 1b68bdaee91f31795c565508a6669ad2 372 Pfam PF00512 His Kinase A (phospho-acceptor) domain 138 199 2.6E-12 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DB29_02577 1b68bdaee91f31795c565508a6669ad2 372 SMART SM00388 138 206 1.3E-13 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DB29_02577 1b68bdaee91f31795c565508a6669ad2 372 PRINTS PR00344 Bacterial sensor protein C-terminal signature 325 343 1.1E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB29_02577 1b68bdaee91f31795c565508a6669ad2 372 PRINTS PR00344 Bacterial sensor protein C-terminal signature 309 319 1.1E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB29_02577 1b68bdaee91f31795c565508a6669ad2 372 PRINTS PR00344 Bacterial sensor protein C-terminal signature 291 305 1.1E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB29_02577 1b68bdaee91f31795c565508a6669ad2 372 PRINTS PR00344 Bacterial sensor protein C-terminal signature 349 362 1.1E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB29_02577 1b68bdaee91f31795c565508a6669ad2 372 SUPERFAMILY SSF47384 122 205 5.89E-17 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DB29_02577 1b68bdaee91f31795c565508a6669ad2 372 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 255 363 2.3E-22 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DB29_02577 1b68bdaee91f31795c565508a6669ad2 372 SMART SM00387 254 365 5.6E-29 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DB29_02577 1b68bdaee91f31795c565508a6669ad2 372 SUPERFAMILY SSF55874 218 362 2.1E-33 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB29_02577 1b68bdaee91f31795c565508a6669ad2 372 Gene3D G3DSA:3.30.565.10 211 370 2.1E-35 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB29_00386 d7c96dd1964910b5f667eec2a21493e5 767 TIGRFAM TIGR02374 nitri_red_nirB: nitrite reductase [NAD(P)H], large subunit 9 758 4.2E-186 T 14-10-2018 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB GO:0008942|GO:0042128|GO:0050660|GO:0050661|GO:0055114 DB29_00386 d7c96dd1964910b5f667eec2a21493e5 767 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 274 281 1.8E-12 T 14-10-2018 DB29_00386 d7c96dd1964910b5f667eec2a21493e5 767 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 1.8E-12 T 14-10-2018 DB29_00386 d7c96dd1964910b5f667eec2a21493e5 767 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 235 249 1.8E-12 T 14-10-2018 DB29_00386 d7c96dd1964910b5f667eec2a21493e5 767 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 149 174 1.8E-12 T 14-10-2018 DB29_00386 d7c96dd1964910b5f667eec2a21493e5 767 Gene3D G3DSA:3.30.390.30 319 398 4.7E-6 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 DB29_00386 d7c96dd1964910b5f667eec2a21493e5 767 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 234 250 1.3E-23 T 14-10-2018 DB29_00386 d7c96dd1964910b5f667eec2a21493e5 767 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 104 122 1.3E-23 T 14-10-2018 DB29_00386 d7c96dd1964910b5f667eec2a21493e5 767 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 149 167 1.3E-23 T 14-10-2018 DB29_00386 d7c96dd1964910b5f667eec2a21493e5 767 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 259 281 1.3E-23 T 14-10-2018 DB29_00386 d7c96dd1964910b5f667eec2a21493e5 767 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 1.3E-23 T 14-10-2018 DB29_00386 d7c96dd1964910b5f667eec2a21493e5 767 SUPERFAMILY SSF55124 495 611 7.03E-10 T 14-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DB29_00386 d7c96dd1964910b5f667eec2a21493e5 767 SUPERFAMILY SSF51905 146 308 4.37E-28 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB29_00386 d7c96dd1964910b5f667eec2a21493e5 767 Gene3D G3DSA:3.50.50.60 10 282 2.3E-90 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB29_00386 d7c96dd1964910b5f667eec2a21493e5 767 Gene3D G3DSA:3.50.50.60 112 246 2.3E-90 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB29_00386 d7c96dd1964910b5f667eec2a21493e5 767 SUPERFAMILY SSF51905 6 193 1.21E-42 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB29_00386 d7c96dd1964910b5f667eec2a21493e5 767 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 549 612 1.0E-9 T 14-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DB29_00386 d7c96dd1964910b5f667eec2a21493e5 767 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 284 3.0E-58 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DB29_00386 d7c96dd1964910b5f667eec2a21493e5 767 Pfam PF04324 BFD-like [2Fe-2S] binding domain 417 465 3.9E-12 T 14-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain DB29_00386 d7c96dd1964910b5f667eec2a21493e5 767 PIRSF PIRSF037149 2 765 7.9E-240 T 14-10-2018 IPR017121 Nitrite reductase [NAD(P)H], large subunit GO:0042128 DB29_00386 d7c96dd1964910b5f667eec2a21493e5 767 Gene3D G3DSA:1.10.10.1100 417 469 2.7E-10 T 14-10-2018 DB29_02693 83a47209b134baed67c40f2f978d1baf 304 Gene3D G3DSA:1.25.40.10 1 300 5.1E-51 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DB29_02693 83a47209b134baed67c40f2f978d1baf 304 SUPERFAMILY SSF47413 1 69 7.04E-15 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DB29_02693 83a47209b134baed67c40f2f978d1baf 304 SMART SM00530 9 63 2.3E-13 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DB29_02693 83a47209b134baed67c40f2f978d1baf 304 Pfam PF01381 Helix-turn-helix 10 62 1.9E-12 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DB29_03657 32eaeda5b0c8a076f27bee5ed4561941 214 Gene3D G3DSA:3.40.470.10 4 209 1.8E-47 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 DB29_03657 32eaeda5b0c8a076f27bee5ed4561941 214 Pfam PF03167 Uracil DNA glycosylase superfamily 25 200 3.2E-40 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 DB29_03657 32eaeda5b0c8a076f27bee5ed4561941 214 SMART SM00986 24 201 3.9E-22 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 DB29_03657 32eaeda5b0c8a076f27bee5ed4561941 214 SMART SM00987 24 201 3.9E-22 T 14-10-2018 DB29_03657 32eaeda5b0c8a076f27bee5ed4561941 214 SUPERFAMILY SSF52141 17 208 1.64E-41 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 DB29_03682 2660877fc48d6daa8149faad8e267928 499 Gene3D G3DSA:3.90.226.10 1 245 7.2E-79 T 14-10-2018 DB29_03682 2660877fc48d6daa8149faad8e267928 499 SUPERFAMILY SSF52096 5 240 9.34E-65 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily DB29_03682 2660877fc48d6daa8149faad8e267928 499 Gene3D G3DSA:3.90.226.10 246 499 3.9E-81 T 14-10-2018 DB29_03682 2660877fc48d6daa8149faad8e267928 499 Pfam PF01039 Carboxyl transferase domain 26 496 1.5E-160 T 14-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 DB29_03682 2660877fc48d6daa8149faad8e267928 499 SUPERFAMILY SSF52096 207 478 3.78E-78 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily DB29_00148 01e39255b4e326189a5f0a6dcd252f83 253 SUPERFAMILY SSF103473 9 237 1.31E-7 T 14-10-2018 IPR036259 MFS transporter superfamily DB29_00148 01e39255b4e326189a5f0a6dcd252f83 253 Pfam PF03741 Integral membrane protein TerC family 13 202 4.3E-48 T 14-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 DB29_00148 01e39255b4e326189a5f0a6dcd252f83 253 TIGRFAM TIGR03716 R_switched_YkoY: integral membrane protein, YkoY family 10 244 4.9E-93 T 14-10-2018 IPR022493 Integral membrane YkoY DB29_03572 9e15d271a2c80cdc040759c717cde70c 344 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 40 342 1.3E-109 T 14-10-2018 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 DB29_03572 9e15d271a2c80cdc040759c717cde70c 344 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 9 341 48.103 T 14-10-2018 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 DB29_03572 9e15d271a2c80cdc040759c717cde70c 344 Pfam PF01409 tRNA synthetases class II core domain (F) 93 341 2.8E-105 T 14-10-2018 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 DB29_03572 9e15d271a2c80cdc040759c717cde70c 344 Gene3D G3DSA:3.30.930.10 9 344 4.0E-123 T 14-10-2018 DB29_03572 9e15d271a2c80cdc040759c717cde70c 344 SUPERFAMILY SSF46589 16 100 1.31E-20 T 14-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 DB29_03572 9e15d271a2c80cdc040759c717cde70c 344 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 20 88 4.5E-24 T 14-10-2018 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 DB29_03572 9e15d271a2c80cdc040759c717cde70c 344 SUPERFAMILY SSF55681 93 342 9.54E-81 T 14-10-2018 DB29_00220 3c5a34564966f13ab5da90ec99978a0b 277 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 1 269 17.644 T 14-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 DB29_00220 3c5a34564966f13ab5da90ec99978a0b 277 Pfam PF02673 Bacitracin resistance protein BacA 6 264 2.1E-76 T 14-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 DB29_04003 4756221e1e027e6becc0387ae82ef6a8 463 Pfam PF07724 AAA domain (Cdc48 subfamily) 211 349 1.8E-40 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 DB29_04003 4756221e1e027e6becc0387ae82ef6a8 463 Gene3D G3DSA:1.10.8.60 355 460 3.6E-38 T 14-10-2018 DB29_04003 4756221e1e027e6becc0387ae82ef6a8 463 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 355 425 3.7E-6 T 14-10-2018 IPR019489 Clp ATPase, C-terminal DB29_04003 4756221e1e027e6becc0387ae82ef6a8 463 SMART SM01086 355 449 1.2E-19 T 14-10-2018 IPR019489 Clp ATPase, C-terminal DB29_04003 4756221e1e027e6becc0387ae82ef6a8 463 SMART SM00382 50 352 1.3E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_04003 4756221e1e027e6becc0387ae82ef6a8 463 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 54 158 1.4E-8 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 DB29_04003 4756221e1e027e6becc0387ae82ef6a8 463 SUPERFAMILY SSF52540 4 461 3.58E-87 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_04003 4756221e1e027e6becc0387ae82ef6a8 463 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 5 463 1.6E-204 T 14-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 DB29_04003 4756221e1e027e6becc0387ae82ef6a8 463 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 2 463 43.54 T 14-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 DB29_00826 bfb6037c36988004e0e737be312c6c9e 186 TIGRFAM TIGR01076 sortase_fam: sortase 60 177 6.1E-29 T 14-10-2018 IPR005754 Sortase family DB29_00826 bfb6037c36988004e0e737be312c6c9e 186 SUPERFAMILY SSF63817 11 182 1.03E-37 T 14-10-2018 IPR023365 Sortase domain superfamily DB29_00826 bfb6037c36988004e0e737be312c6c9e 186 Gene3D G3DSA:2.40.260.10 21 186 2.2E-37 T 14-10-2018 IPR023365 Sortase domain superfamily DB29_00826 bfb6037c36988004e0e737be312c6c9e 186 Pfam PF04203 Sortase family 61 180 1.0E-24 T 14-10-2018 IPR005754 Sortase family DB29_00118 280f5664cfbaa67b9c0ca49f680ae3fe 368 SUPERFAMILY SSF53383 21 363 1.45E-101 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DB29_00118 280f5664cfbaa67b9c0ca49f680ae3fe 368 Gene3D G3DSA:3.90.1150.10 280 368 2.6E-26 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DB29_00118 280f5664cfbaa67b9c0ca49f680ae3fe 368 Gene3D G3DSA:3.90.1150.10 247 279 3.4E-5 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DB29_00118 280f5664cfbaa67b9c0ca49f680ae3fe 368 Gene3D G3DSA:3.40.640.10 5 246 4.0E-85 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DB29_00118 280f5664cfbaa67b9c0ca49f680ae3fe 368 PIRSF PIRSF001434 1 366 1.3E-117 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 DB29_00118 280f5664cfbaa67b9c0ca49f680ae3fe 368 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 6 362 1.0E-128 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 DB29_00118 280f5664cfbaa67b9c0ca49f680ae3fe 368 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 189 203 - T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 DB29_00271 50d360953501e689aabc40f309425af4 70 Pfam PF06014 Bacterial protein of unknown function (DUF910) 1 60 1.5E-24 T 14-10-2018 IPR009256 Protein of unknown function DUF910 DB29_00271 50d360953501e689aabc40f309425af4 70 Gene3D G3DSA:1.10.287.760 1 69 6.9E-24 T 14-10-2018 IPR023164 YqgQ-like superfamily DB29_00271 50d360953501e689aabc40f309425af4 70 SUPERFAMILY SSF158379 1 60 2.35E-20 T 14-10-2018 IPR023164 YqgQ-like superfamily DB29_03736 87e7af859ecab9087196079dc87d20a6 300 Gene3D G3DSA:1.10.472.60 74 197 3.3E-29 T 14-10-2018 DB29_03736 87e7af859ecab9087196079dc87d20a6 300 SUPERFAMILY SSF52833 32 234 4.41E-31 T 14-10-2018 IPR036249 Thioredoxin-like superfamily DB29_03736 87e7af859ecab9087196079dc87d20a6 300 Gene3D G3DSA:3.40.30.10 39 221 3.3E-29 T 14-10-2018 DB29_03736 87e7af859ecab9087196079dc87d20a6 300 Pfam PF13743 Thioredoxin 37 228 2.0E-71 T 14-10-2018 DB29_02428 38f908be17df62577c23e1eb3276a80c 243 SMART SM00422 4 75 3.7E-6 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DB29_02428 38f908be17df62577c23e1eb3276a80c 243 SMART SM00422 122 191 5.9E-16 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DB29_02428 38f908be17df62577c23e1eb3276a80c 243 Pfam PF13411 MerR HTH family regulatory protein 122 189 7.4E-18 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DB29_02428 38f908be17df62577c23e1eb3276a80c 243 Gene3D G3DSA:1.10.1660.10 113 228 1.5E-23 T 14-10-2018 DB29_02428 38f908be17df62577c23e1eb3276a80c 243 Gene3D G3DSA:1.10.1660.10 1 107 8.6E-15 T 14-10-2018 DB29_02428 38f908be17df62577c23e1eb3276a80c 243 SUPERFAMILY SSF46955 121 224 4.17E-21 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily DB29_02428 38f908be17df62577c23e1eb3276a80c 243 Pfam PF00376 MerR family regulatory protein 8 42 1.3E-10 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DB29_02428 38f908be17df62577c23e1eb3276a80c 243 SUPERFAMILY SSF46955 8 82 1.47E-13 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily DB29_02981 13958d1a84ea4609b220fbf3af362463 302 Hamap MF_00188 Protease HtpX [htpX]. 2 302 23.985 T 14-10-2018 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 DB29_02981 13958d1a84ea4609b220fbf3af362463 302 Gene3D G3DSA:3.30.2010.10 82 173 3.7E-30 T 14-10-2018 DB29_02981 13958d1a84ea4609b220fbf3af362463 302 Pfam PF01435 Peptidase family M48 88 302 2.3E-39 T 14-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 DB29_01974 643a6ed0def7788e02b8db27cb42b816 454 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 403 431 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 DB29_01974 643a6ed0def7788e02b8db27cb42b816 454 Gene3D G3DSA:2.160.10.10 253 439 5.6E-49 T 14-10-2018 DB29_01974 643a6ed0def7788e02b8db27cb42b816 454 SUPERFAMILY SSF51161 222 435 2.09E-45 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily DB29_01974 643a6ed0def7788e02b8db27cb42b816 454 Pfam PF12804 MobA-like NTP transferase domain 6 133 3.1E-23 T 14-10-2018 IPR025877 MobA-like NTP transferase DB29_01974 643a6ed0def7788e02b8db27cb42b816 454 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 267 300 5.5E-7 T 14-10-2018 IPR001451 Hexapeptide repeat DB29_01974 643a6ed0def7788e02b8db27cb42b816 454 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 395 428 7.5E-6 T 14-10-2018 IPR001451 Hexapeptide repeat DB29_01974 643a6ed0def7788e02b8db27cb42b816 454 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 318 351 1.1E-6 T 14-10-2018 IPR001451 Hexapeptide repeat DB29_01974 643a6ed0def7788e02b8db27cb42b816 454 Gene3D G3DSA:3.90.550.10 3 252 9.5E-83 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DB29_01974 643a6ed0def7788e02b8db27cb42b816 454 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 3 452 41.921 T 14-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 DB29_01974 643a6ed0def7788e02b8db27cb42b816 454 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 6 452 1.4E-182 T 14-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 DB29_01974 643a6ed0def7788e02b8db27cb42b816 454 SUPERFAMILY SSF53448 5 253 2.21E-66 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DB29_02601 a88978d9ac0823000ef5e5b094688a71 443 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 18 438 2.1E-115 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 DB29_02601 a88978d9ac0823000ef5e5b094688a71 443 PIRSF PIRSF006066 1 443 5.1E-132 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 DB29_02601 a88978d9ac0823000ef5e5b094688a71 443 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 7 432 6.5E-106 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit DB29_03512 0275d59a7064bb4bfa3ca905c4c2b730 403 TIGRFAM TIGR00032 argG: argininosuccinate synthase 5 394 3.8E-169 T 14-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 DB29_03512 0275d59a7064bb4bfa3ca905c4c2b730 403 Gene3D G3DSA:3.90.1260.10 174 401 3.8E-90 T 14-10-2018 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 DB29_03512 0275d59a7064bb4bfa3ca905c4c2b730 403 SUPERFAMILY SSF69864 170 397 1.57E-91 T 14-10-2018 DB29_03512 0275d59a7064bb4bfa3ca905c4c2b730 403 Pfam PF00764 Arginosuccinate synthase 7 391 9.2E-176 T 14-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 DB29_03512 0275d59a7064bb4bfa3ca905c4c2b730 403 Gene3D G3DSA:3.40.50.620 1 173 3.6E-67 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DB29_03512 0275d59a7064bb4bfa3ca905c4c2b730 403 Hamap MF_00005 Argininosuccinate synthase [argG]. 3 396 54.524 T 14-10-2018 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 DB29_03512 0275d59a7064bb4bfa3ca905c4c2b730 403 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 116 127 - T 14-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 DB29_03512 0275d59a7064bb4bfa3ca905c4c2b730 403 SUPERFAMILY SSF52402 3 164 8.82E-48 T 14-10-2018 DB29_03512 0275d59a7064bb4bfa3ca905c4c2b730 403 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 9 17 - T 14-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 DB29_00211 6f8bb76d94ca1b6d187a68712460a083 435 SUPERFAMILY SSF54680 332 432 3.14E-29 T 14-10-2018 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 DB29_00211 6f8bb76d94ca1b6d187a68712460a083 435 PIRSF PIRSF000478 1 433 2.4E-164 T 14-10-2018 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 DB29_00211 6f8bb76d94ca1b6d187a68712460a083 435 Pfam PF00591 Glycosyl transferase family, a/b domain 77 306 1.0E-45 T 14-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 DB29_00211 6f8bb76d94ca1b6d187a68712460a083 435 SMART SM00941 345 418 1.7E-30 T 14-10-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 DB29_00211 6f8bb76d94ca1b6d187a68712460a083 435 Pfam PF02885 Glycosyl transferase family, helical bundle domain 4 66 8.0E-22 T 14-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 DB29_00211 6f8bb76d94ca1b6d187a68712460a083 435 SUPERFAMILY SSF52418 69 329 8.11E-93 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 DB29_00211 6f8bb76d94ca1b6d187a68712460a083 435 ProSitePatterns PS00647 Thymidine and pyrimidine-nucleoside phosphorylases signature. 110 125 - T 14-10-2018 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 DB29_00211 6f8bb76d94ca1b6d187a68712460a083 435 Gene3D G3DSA:3.90.1170.30 331 420 2.2E-151 T 14-10-2018 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 DB29_00211 6f8bb76d94ca1b6d187a68712460a083 435 Pfam PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain 345 417 5.6E-25 T 14-10-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 DB29_00211 6f8bb76d94ca1b6d187a68712460a083 435 Gene3D G3DSA:3.40.1030.10 77 330 2.2E-151 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 DB29_00211 6f8bb76d94ca1b6d187a68712460a083 435 TIGRFAM TIGR02644 Y_phosphoryl: pyrimidine-nucleoside phosphorylase 3 417 4.2E-177 T 14-10-2018 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic GO:0006213|GO:0016154 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181|Reactome: R-HSA-73614|Reactome: R-HSA-73621 DB29_00211 6f8bb76d94ca1b6d187a68712460a083 435 Gene3D G3DSA:1.20.970.10 1 67 7.0E-28 T 14-10-2018 DB29_00211 6f8bb76d94ca1b6d187a68712460a083 435 SUPERFAMILY SSF47648 1 69 7.06E-24 T 14-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 DB29_01352 de47e55f50c35176de2a9ffb81080840 305 SUPERFAMILY SSF53850 75 305 1.47E-70 T 14-10-2018 DB29_01352 de47e55f50c35176de2a9ffb81080840 305 Pfam PF14503 YhfZ C-terminal domain 75 305 9.3E-85 T 14-10-2018 IPR032791 Uncharacterised protein YhfZ, C-terminal domain DB29_01352 de47e55f50c35176de2a9ffb81080840 305 Gene3D G3DSA:1.10.10.10 14 78 1.0E-6 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_01352 de47e55f50c35176de2a9ffb81080840 305 SUPERFAMILY SSF46785 15 71 1.92E-5 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_01352 de47e55f50c35176de2a9ffb81080840 305 Gene3D G3DSA:3.40.190.10 169 263 7.9E-71 T 14-10-2018 DB29_01352 de47e55f50c35176de2a9ffb81080840 305 Pfam PF14502 Helix-turn-helix domain 26 71 4.4E-16 T 14-10-2018 DB29_01352 de47e55f50c35176de2a9ffb81080840 305 Gene3D G3DSA:3.40.190.10 91 305 7.9E-71 T 14-10-2018 DB29_01677 bcd7ebdee3376f20af81effd1b1c13d5 104 Pfam PF05336 L-rhamnose mutarotase 3 103 5.8E-28 T 14-10-2018 IPR008000 Rhamnose/fucose mutarotase GO:0005737|GO:0016857 DB29_01677 bcd7ebdee3376f20af81effd1b1c13d5 104 TIGRFAM TIGR02625 YiiL_rotase: L-rhamnose mutarotase 3 103 1.5E-47 T 14-10-2018 IPR013448 L-rhamnose mutarotase GO:0005737|GO:0016857|GO:0019299 DB29_01677 bcd7ebdee3376f20af81effd1b1c13d5 104 Hamap MF_01663 L-rhamnose mutarotase [rhaM]. 1 104 30.957 T 14-10-2018 IPR013448 L-rhamnose mutarotase GO:0005737|GO:0016857|GO:0019299 DB29_01677 bcd7ebdee3376f20af81effd1b1c13d5 104 SUPERFAMILY SSF54909 1 103 3.13E-36 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel DB29_01677 bcd7ebdee3376f20af81effd1b1c13d5 104 Gene3D G3DSA:3.30.70.100 1 97 2.6E-34 T 14-10-2018 DB29_00587 383ad9d753c05a2d3dcc23d796271335 338 Pfam PF02810 SEC-C motif 4 21 2.4E-10 T 14-10-2018 IPR004027 SEC-C motif DB29_00587 383ad9d753c05a2d3dcc23d796271335 338 Gene3D G3DSA:3.10.450.50 1 23 2.0E-5 T 14-10-2018 DB29_00587 383ad9d753c05a2d3dcc23d796271335 338 SUPERFAMILY SSF47954 260 334 1.25E-5 T 14-10-2018 IPR036915 Cyclin-like superfamily DB29_00587 383ad9d753c05a2d3dcc23d796271335 338 SUPERFAMILY SSF103642 3 23 4.25E-7 T 14-10-2018 DB29_01024 3982df2c349a2f9a653724f23eb80915 271 Gene3D G3DSA:3.60.21.10 43 246 1.6E-21 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like DB29_01024 3982df2c349a2f9a653724f23eb80915 271 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 45 209 8.0E-10 T 14-10-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 DB29_01024 3982df2c349a2f9a653724f23eb80915 271 SUPERFAMILY SSF56300 45 267 2.89E-29 T 14-10-2018 DB29_00719 958a510c264e1b54fab3166205bcc416 556 TIGRFAM TIGR02403 trehalose_treC: alpha,alpha-phosphotrehalase 3 553 6.8E-267 T 14-10-2018 IPR012769 Trehalose-6-phosphate hydrolase GO:0005737|GO:0005993|GO:0008788 KEGG: 00500+3.2.1.93 DB29_00719 958a510c264e1b54fab3166205bcc416 556 Pfam PF16657 Maltogenic Amylase, C-terminal domain 477 548 4.0E-10 T 14-10-2018 IPR032091 Maltogenic Amylase, C-terminal DB29_00719 958a510c264e1b54fab3166205bcc416 556 Gene3D G3DSA:3.20.20.80 3 469 3.1E-201 T 14-10-2018 DB29_00719 958a510c264e1b54fab3166205bcc416 556 Gene3D G3DSA:3.90.400.10 103 172 3.1E-201 T 14-10-2018 DB29_00719 958a510c264e1b54fab3166205bcc416 556 SUPERFAMILY SSF51445 2 473 2.08E-157 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily DB29_00719 958a510c264e1b54fab3166205bcc416 556 SUPERFAMILY SSF51011 477 554 1.8E-18 T 14-10-2018 DB29_00719 958a510c264e1b54fab3166205bcc416 556 SMART SM00642 11 416 2.5E-156 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 DB29_00719 958a510c264e1b54fab3166205bcc416 556 Pfam PF00128 Alpha amylase, catalytic domain 26 374 1.3E-127 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 DB29_00719 958a510c264e1b54fab3166205bcc416 556 Gene3D G3DSA:2.60.40.1180 478 556 2.0E-20 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta DB29_00007 b220313b259bd7f0a116385ade769999 176 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 17 170 2.6E-25 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 DB29_00007 b220313b259bd7f0a116385ade769999 176 SUPERFAMILY SSF88946 1 99 7.38E-26 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 DB29_00007 b220313b259bd7f0a116385ade769999 176 Gene3D G3DSA:1.10.1740.10 1 110 3.8E-22 T 14-10-2018 DB29_00007 b220313b259bd7f0a116385ade769999 176 Pfam PF04542 Sigma-70 region 2 22 88 2.1E-15 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 DB29_00007 b220313b259bd7f0a116385ade769999 176 SUPERFAMILY SSF88659 106 170 3.36E-14 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like DB29_00007 b220313b259bd7f0a116385ade769999 176 Gene3D G3DSA:1.10.10.10 112 175 4.5E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_00007 b220313b259bd7f0a116385ade769999 176 Pfam PF08281 Sigma-70, region 4 118 164 1.6E-11 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DB29_03113 5258338bba27756d6371dd724b28c722 456 SUPERFAMILY SSF51735 1 192 1.84E-51 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_03113 5258338bba27756d6371dd724b28c722 456 Gene3D G3DSA:3.40.50.720 228 439 1.3E-71 T 14-10-2018 DB29_03113 5258338bba27756d6371dd724b28c722 456 Gene3D G3DSA:1.20.5.100 196 227 2.9E-18 T 14-10-2018 DB29_03113 5258338bba27756d6371dd724b28c722 456 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 197 289 3.0E-38 T 14-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 DB29_03113 5258338bba27756d6371dd724b28c722 456 PIRSF PIRSF500134 1 432 2.3E-169 T 14-10-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 DB29_03113 5258338bba27756d6371dd724b28c722 456 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 313 414 3.3E-29 T 14-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 DB29_03113 5258338bba27756d6371dd724b28c722 456 Gene3D G3DSA:3.40.50.720 1 195 2.8E-72 T 14-10-2018 DB29_03113 5258338bba27756d6371dd724b28c722 456 SUPERFAMILY SSF52413 301 424 7.98E-35 T 14-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 DB29_03113 5258338bba27756d6371dd724b28c722 456 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 182 3.3E-64 T 14-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 DB29_03113 5258338bba27756d6371dd724b28c722 456 SUPERFAMILY SSF48179 197 293 1.16E-31 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 DB29_03113 5258338bba27756d6371dd724b28c722 456 PIRSF PIRSF000124 1 429 9.8E-134 T 14-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 DB29_03113 5258338bba27756d6371dd724b28c722 456 SMART SM00984 313 414 6.5E-42 T 14-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 DB29_03113 5258338bba27756d6371dd724b28c722 456 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 410 3.4E-138 T 14-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 DB29_02455 7f9f0a225f1c092c9b8f3d4957b7af5c 254 SUPERFAMILY SSF52540 3 234 9.38E-71 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_02455 7f9f0a225f1c092c9b8f3d4957b7af5c 254 Pfam PF00005 ABC transporter 22 161 2.1E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB29_02455 7f9f0a225f1c092c9b8f3d4957b7af5c 254 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB29_02455 7f9f0a225f1c092c9b8f3d4957b7af5c 254 Gene3D G3DSA:3.40.50.300 2 251 2.5E-66 T 14-10-2018 DB29_02455 7f9f0a225f1c092c9b8f3d4957b7af5c 254 SMART SM00382 31 211 5.9E-19 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_02060 8f647df6100e0627fea0581b754178bb 45 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 3 45 4.0E-22 T 14-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB29_02060 8f647df6100e0627fea0581b754178bb 45 Pfam PF00468 Ribosomal protein L34 3 45 4.2E-24 T 14-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB29_02060 8f647df6100e0627fea0581b754178bb 45 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 3 43 1.0E-15 T 14-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB29_02060 8f647df6100e0627fea0581b754178bb 45 ProSitePatterns PS00784 Ribosomal protein L34 signature. 3 22 - T 14-10-2018 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 DB29_02060 8f647df6100e0627fea0581b754178bb 45 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 2 45 15.532 T 14-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB29_03326 f592a3006086e90d4cb2c82b2ad2540a 423 ProSitePatterns PS00161 Isocitrate lyase signature. 182 187 - T 14-10-2018 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824 DB29_03326 f592a3006086e90d4cb2c82b2ad2540a 423 Pfam PF00463 Isocitrate lyase family 7 244 5.1E-57 T 14-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 DB29_03326 f592a3006086e90d4cb2c82b2ad2540a 423 Pfam PF00463 Isocitrate lyase family 245 421 3.0E-47 T 14-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 DB29_03326 f592a3006086e90d4cb2c82b2ad2540a 423 Gene3D G3DSA:3.20.20.60 1 404 4.9E-171 T 14-10-2018 DB29_03326 f592a3006086e90d4cb2c82b2ad2540a 423 PIRSF PIRSF001362 1 423 5.9E-237 T 14-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 DB29_03326 f592a3006086e90d4cb2c82b2ad2540a 423 SUPERFAMILY SSF51621 5 421 1.57E-155 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 DB29_03326 f592a3006086e90d4cb2c82b2ad2540a 423 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 8 244 4.6E-102 T 14-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 DB29_03460 6e88b1340bd24626ada9ef0ab6672dbe 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 130 148 9.6E-35 T 14-10-2018 DB29_03460 6e88b1340bd24626ada9ef0ab6672dbe 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 169 187 9.6E-35 T 14-10-2018 DB29_03460 6e88b1340bd24626ada9ef0ab6672dbe 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 9.6E-35 T 14-10-2018 DB29_03460 6e88b1340bd24626ada9ef0ab6672dbe 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 248 264 9.6E-35 T 14-10-2018 DB29_03460 6e88b1340bd24626ada9ef0ab6672dbe 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 276 298 9.6E-35 T 14-10-2018 DB29_03460 6e88b1340bd24626ada9ef0ab6672dbe 450 Gene3D G3DSA:3.50.50.60 142 255 1.0E-94 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB29_03460 6e88b1340bd24626ada9ef0ab6672dbe 450 Gene3D G3DSA:3.50.50.60 6 315 1.0E-94 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB29_03460 6e88b1340bd24626ada9ef0ab6672dbe 450 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 38 48 - T 14-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 DB29_03460 6e88b1340bd24626ada9ef0ab6672dbe 450 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 4 449 2.8E-138 T 14-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 DB29_03460 6e88b1340bd24626ada9ef0ab6672dbe 450 SUPERFAMILY SSF55424 329 449 2.06E-35 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 DB29_03460 6e88b1340bd24626ada9ef0ab6672dbe 450 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 311 2.1E-63 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DB29_03460 6e88b1340bd24626ada9ef0ab6672dbe 450 PIRSF PIRSF000350 2 449 4.0E-79 T 14-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 DB29_03460 6e88b1340bd24626ada9ef0ab6672dbe 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 414 434 4.2E-64 T 14-10-2018 DB29_03460 6e88b1340bd24626ada9ef0ab6672dbe 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 249 263 4.2E-64 T 14-10-2018 DB29_03460 6e88b1340bd24626ada9ef0ab6672dbe 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 291 298 4.2E-64 T 14-10-2018 DB29_03460 6e88b1340bd24626ada9ef0ab6672dbe 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 133 142 4.2E-64 T 14-10-2018 DB29_03460 6e88b1340bd24626ada9ef0ab6672dbe 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 169 194 4.2E-64 T 14-10-2018 DB29_03460 6e88b1340bd24626ada9ef0ab6672dbe 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 37 52 4.2E-64 T 14-10-2018 DB29_03460 6e88b1340bd24626ada9ef0ab6672dbe 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 327 348 4.2E-64 T 14-10-2018 DB29_03460 6e88b1340bd24626ada9ef0ab6672dbe 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 4.2E-64 T 14-10-2018 DB29_03460 6e88b1340bd24626ada9ef0ab6672dbe 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 392 407 4.2E-64 T 14-10-2018 DB29_03460 6e88b1340bd24626ada9ef0ab6672dbe 450 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 331 439 3.2E-30 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 DB29_03460 6e88b1340bd24626ada9ef0ab6672dbe 450 Gene3D G3DSA:3.30.390.30 330 450 4.1E-39 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 DB29_03460 6e88b1340bd24626ada9ef0ab6672dbe 450 SUPERFAMILY SSF51905 3 321 4.03E-52 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB29_00624 0c17aca8cb61c75cee4fbddcfa9247f4 261 TIGRFAM TIGR03580 EF_0832: conserved hypothetical protein EF_0832/AHA_3913 3 258 1.1E-154 T 14-10-2018 IPR020042 Protein of unknown function DUF4311 DB29_00624 0c17aca8cb61c75cee4fbddcfa9247f4 261 Pfam PF14188 Domain of unknown function (DUF4311) 26 238 7.9E-124 T 14-10-2018 IPR020042 Protein of unknown function DUF4311 DB29_02149 b68e50d7ff01e2331e9cc33f0210f679 589 SUPERFAMILY SSF51445 66 500 6.87E-129 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily DB29_02149 b68e50d7ff01e2331e9cc33f0210f679 589 SMART SM00642 137 494 9.9E-128 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 DB29_02149 b68e50d7ff01e2331e9cc33f0210f679 589 Gene3D G3DSA:3.90.400.10 244 297 4.6E-158 T 14-10-2018 DB29_02149 b68e50d7ff01e2331e9cc33f0210f679 589 Pfam PF02903 Alpha amylase, N-terminal ig-like domain 2 119 2.1E-42 T 14-10-2018 IPR004185 Glycoside hydrolase, family 13, N-terminal Ig-like domain GO:0004553|GO:0005975 DB29_02149 b68e50d7ff01e2331e9cc33f0210f679 589 PIRSF PIRSF001024 106 568 1.2E-51 T 14-10-2018 IPR013777 Alpha-amylase-like GO:0004556|GO:0005509|GO:0005975 DB29_02149 b68e50d7ff01e2331e9cc33f0210f679 589 Gene3D G3DSA:3.20.20.80 131 495 4.6E-158 T 14-10-2018 DB29_02149 b68e50d7ff01e2331e9cc33f0210f679 589 SUPERFAMILY SSF51011 506 565 1.54E-5 T 14-10-2018 DB29_02149 b68e50d7ff01e2331e9cc33f0210f679 589 Gene3D G3DSA:2.60.40.10 1 123 5.1E-44 T 14-10-2018 IPR013783 Immunoglobulin-like fold DB29_02149 b68e50d7ff01e2331e9cc33f0210f679 589 Pfam PF00128 Alpha amylase, catalytic domain 171 466 5.2E-81 T 14-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 DB29_01924 c673f4ed4a64497f995d4685f3936fa2 485 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 4 485 34.23 T 14-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 DB29_01924 c673f4ed4a64497f995d4685f3936fa2 485 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 11 22 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 DB29_01924 c673f4ed4a64497f995d4685f3936fa2 485 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 5 483 3.7E-183 T 14-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 DB29_01924 c673f4ed4a64497f995d4685f3936fa2 485 SUPERFAMILY SSF52374 5 317 4.02E-113 T 14-10-2018 DB29_01924 c673f4ed4a64497f995d4685f3936fa2 485 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 5 324 1.8E-115 T 14-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 DB29_01924 c673f4ed4a64497f995d4685f3936fa2 485 SUPERFAMILY SSF48163 298 485 5.89E-48 T 14-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 DB29_01924 c673f4ed4a64497f995d4685f3936fa2 485 PRINTS PR00987 Glutamyl-tRNA synthetase signature 195 205 1.2E-27 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 DB29_01924 c673f4ed4a64497f995d4685f3936fa2 485 PRINTS PR00987 Glutamyl-tRNA synthetase signature 8 20 1.2E-27 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 DB29_01924 c673f4ed4a64497f995d4685f3936fa2 485 PRINTS PR00987 Glutamyl-tRNA synthetase signature 22 33 1.2E-27 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 DB29_01924 c673f4ed4a64497f995d4685f3936fa2 485 PRINTS PR00987 Glutamyl-tRNA synthetase signature 37 50 1.2E-27 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 DB29_01924 c673f4ed4a64497f995d4685f3936fa2 485 PRINTS PR00987 Glutamyl-tRNA synthetase signature 211 219 1.2E-27 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 DB29_01924 c673f4ed4a64497f995d4685f3936fa2 485 Gene3D G3DSA:1.10.10.350 391 485 7.7E-31 T 14-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 DB29_01924 c673f4ed4a64497f995d4685f3936fa2 485 Gene3D G3DSA:3.40.50.620 1 333 1.1E-144 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DB29_02497 cf8f3d64bc78c54931f5e6c1b73a8c4c 300 Gene3D G3DSA:3.40.190.290 94 298 2.4E-37 T 14-10-2018 DB29_02497 cf8f3d64bc78c54931f5e6c1b73a8c4c 300 Pfam PF03466 LysR substrate binding domain 90 293 8.8E-41 T 14-10-2018 IPR005119 LysR, substrate-binding DB29_02497 cf8f3d64bc78c54931f5e6c1b73a8c4c 300 SUPERFAMILY SSF46785 1 109 7.62E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_02497 cf8f3d64bc78c54931f5e6c1b73a8c4c 300 Gene3D G3DSA:1.10.10.10 1 93 8.1E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_02497 cf8f3d64bc78c54931f5e6c1b73a8c4c 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.0E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DB29_02497 cf8f3d64bc78c54931f5e6c1b73a8c4c 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.0E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DB29_02497 cf8f3d64bc78c54931f5e6c1b73a8c4c 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.0E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DB29_02497 cf8f3d64bc78c54931f5e6c1b73a8c4c 300 SUPERFAMILY SSF53850 90 294 2.9E-39 T 14-10-2018 DB29_02497 cf8f3d64bc78c54931f5e6c1b73a8c4c 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 4.0E-21 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DB29_02813 9f34173768af8c74ce68b77eee348175 212 SUPERFAMILY SSF143081 2 211 7.19E-65 T 14-10-2018 IPR036590 SOS response associated peptidase-like DB29_02813 9f34173768af8c74ce68b77eee348175 212 Gene3D G3DSA:3.90.1680.10 1 212 3.6E-60 T 14-10-2018 IPR036590 SOS response associated peptidase-like DB29_02813 9f34173768af8c74ce68b77eee348175 212 Pfam PF02586 SOS response associated peptidase (SRAP) 1 205 1.9E-62 T 14-10-2018 IPR003738 SOS response associated peptidase (SRAP) DB29_02717 9f93d4e9becbd755e96c861192297a65 499 ProSitePatterns PS00211 ABC transporters family signature. 395 409 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB29_02717 9f93d4e9becbd755e96c861192297a65 499 Gene3D G3DSA:3.40.50.300 255 496 2.0E-42 T 14-10-2018 DB29_02717 9f93d4e9becbd755e96c861192297a65 499 SMART SM00382 27 216 2.2E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_02717 9f93d4e9becbd755e96c861192297a65 499 SMART SM00382 277 472 0.0023 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_02717 9f93d4e9becbd755e96c861192297a65 499 SUPERFAMILY SSF52540 2 220 1.88E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_02717 9f93d4e9becbd755e96c861192297a65 499 Pfam PF00005 ABC transporter 269 422 1.1E-21 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB29_02717 9f93d4e9becbd755e96c861192297a65 499 Pfam PF00005 ABC transporter 18 169 2.2E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB29_02717 9f93d4e9becbd755e96c861192297a65 499 SUPERFAMILY SSF52540 265 485 1.04E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_02717 9f93d4e9becbd755e96c861192297a65 499 Gene3D G3DSA:3.40.50.300 1 237 1.3E-61 T 14-10-2018 DB29_02951 1b1af65ccb295d3416927c803debd5c4 443 Pfam PF01979 Amidohydrolase family 55 411 7.3E-63 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 DB29_02951 1b1af65ccb295d3416927c803debd5c4 443 Gene3D G3DSA:2.30.40.10 18 428 4.7E-119 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DB29_02951 1b1af65ccb295d3416927c803debd5c4 443 SUPERFAMILY SSF51338 3 434 2.24E-20 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DB29_02951 1b1af65ccb295d3416927c803debd5c4 443 SUPERFAMILY SSF51556 57 360 4.77E-89 T 14-10-2018 IPR032466 Metal-dependent hydrolase DB29_02951 1b1af65ccb295d3416927c803debd5c4 443 Gene3D G3DSA:3.20.20.140 58 357 4.7E-119 T 14-10-2018 DB29_03139 096d83eb778d6bc967a2dc4595544541 365 Gene3D G3DSA:3.30.360.10 129 345 8.0E-34 T 14-10-2018 DB29_03139 096d83eb778d6bc967a2dc4595544541 365 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 5 118 2.6E-17 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 DB29_03139 096d83eb778d6bc967a2dc4595544541 365 Gene3D G3DSA:3.40.50.720 1 125 2.1E-25 T 14-10-2018 DB29_03139 096d83eb778d6bc967a2dc4595544541 365 SUPERFAMILY SSF51735 2 187 2.46E-36 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_03139 096d83eb778d6bc967a2dc4595544541 365 SUPERFAMILY SSF55347 130 286 1.08E-30 T 14-10-2018 DB29_02002 2a65f97f568e5a8bc0166bc3e280d87f 116 Pfam PF06156 Initiation control protein YabA 2 111 6.6E-35 T 14-10-2018 IPR010377 Initiation control protein YabA GO:0006260 DB29_02002 2a65f97f568e5a8bc0166bc3e280d87f 116 Hamap MF_01159 Initiation-control protein YabA. 1 115 23.178 T 14-10-2018 IPR010377 Initiation control protein YabA GO:0006260 DB29_02002 2a65f97f568e5a8bc0166bc3e280d87f 116 PIRSF PIRSF021439 1 116 6.5E-41 T 14-10-2018 IPR010377 Initiation control protein YabA GO:0006260 DB29_02940 f7badb11dfacc7378d5f26817a7d8056 306 SUPERFAMILY SSF141986 166 297 1.44E-33 T 14-10-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily DB29_02940 f7badb11dfacc7378d5f26817a7d8056 306 Pfam PF02016 LD-carboxypeptidase 14 291 2.3E-65 T 14-10-2018 IPR003507 Peptidase family S66 DB29_02940 f7badb11dfacc7378d5f26817a7d8056 306 SUPERFAMILY SSF52317 3 151 3.98E-41 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like DB29_02940 f7badb11dfacc7378d5f26817a7d8056 306 PIRSF PIRSF028757 2 306 7.0E-70 T 14-10-2018 IPR003507 Peptidase family S66 DB29_02940 f7badb11dfacc7378d5f26817a7d8056 306 Gene3D G3DSA:3.40.50.10740 2 155 2.5E-43 T 14-10-2018 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal DB29_02940 f7badb11dfacc7378d5f26817a7d8056 306 Gene3D G3DSA:3.50.30.60 159 306 5.2E-34 T 14-10-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily DB29_01184 73a08cdd265926d1f576ef2a979bdf03 720 SMART SM00732 318 416 2.7E-29 T 14-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 DB29_01184 73a08cdd265926d1f576ef2a979bdf03 720 SUPERFAMILY SSF158832 4 313 2.22E-105 T 14-10-2018 DB29_01184 73a08cdd265926d1f576ef2a979bdf03 720 Pfam PF00575 S1 RNA binding domain 643 715 1.6E-18 T 14-10-2018 IPR003029 S1 domain GO:0003676 DB29_01184 73a08cdd265926d1f576ef2a979bdf03 720 SMART SM00316 644 715 5.6E-26 T 14-10-2018 IPR022967 RNA-binding domain, S1 DB29_01184 73a08cdd265926d1f576ef2a979bdf03 720 Pfam PF16921 Tex protein YqgF-like domain 318 443 1.0E-55 T 14-10-2018 IPR032639 Tex protein, YqgF-like domain DB29_01184 73a08cdd265926d1f576ef2a979bdf03 720 Gene3D G3DSA:1.10.150.310 491 625 3.1E-46 T 14-10-2018 DB29_01184 73a08cdd265926d1f576ef2a979bdf03 720 Pfam PF12836 Helix-hairpin-helix motif 483 547 1.3E-26 T 14-10-2018 DB29_01184 73a08cdd265926d1f576ef2a979bdf03 720 Gene3D G3DSA:3.30.420.140 317 443 3.4E-151 T 14-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 DB29_01184 73a08cdd265926d1f576ef2a979bdf03 720 SUPERFAMILY SSF47781 462 550 2.45E-26 T 14-10-2018 IPR010994 RuvA domain 2-like DB29_01184 73a08cdd265926d1f576ef2a979bdf03 720 Pfam PF09371 Tex-like protein N-terminal domain 10 191 4.9E-64 T 14-10-2018 IPR018974 Tex-like protein, N-terminal DB29_01184 73a08cdd265926d1f576ef2a979bdf03 720 SUPERFAMILY SSF47781 552 627 3.26E-16 T 14-10-2018 IPR010994 RuvA domain 2-like DB29_01184 73a08cdd265926d1f576ef2a979bdf03 720 Gene3D G3DSA:1.10.3500.10 111 490 3.4E-151 T 14-10-2018 IPR023323 Tex-like domain superfamily DB29_01184 73a08cdd265926d1f576ef2a979bdf03 720 Gene3D G3DSA:2.40.50.140 627 717 1.5E-27 T 14-10-2018 DB29_01184 73a08cdd265926d1f576ef2a979bdf03 720 SUPERFAMILY SSF53098 314 461 3.03E-49 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily DB29_01184 73a08cdd265926d1f576ef2a979bdf03 720 Gene3D G3DSA:1.10.10.650 1 108 1.8E-37 T 14-10-2018 IPR023319 Tex-like protein, HTH domain superfamily DB29_01184 73a08cdd265926d1f576ef2a979bdf03 720 SUPERFAMILY SSF50249 631 718 3.86E-25 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DB29_00037 42726b97ae8479b8213b493f6d662958 308 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 10 292 2.2E-60 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme DB29_00037 42726b97ae8479b8213b493f6d662958 308 Gene3D G3DSA:3.40.50.1100 45 146 2.7E-110 T 14-10-2018 DB29_00037 42726b97ae8479b8213b493f6d662958 308 Gene3D G3DSA:3.40.50.1100 10 299 2.7E-110 T 14-10-2018 DB29_00037 42726b97ae8479b8213b493f6d662958 308 SUPERFAMILY SSF53686 1 302 3.14E-86 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme DB29_00037 42726b97ae8479b8213b493f6d662958 308 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 33 51 - T 14-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 DB29_03911 ada252be361a469cec78c84cdaa238a9 644 Pfam PF00905 Penicillin binding protein transpeptidase domain 247 556 7.9E-88 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 DB29_03911 ada252be361a469cec78c84cdaa238a9 644 SMART SM00740 580 638 6.2E-9 T 14-10-2018 IPR005543 PASTA domain DB29_03911 ada252be361a469cec78c84cdaa238a9 644 Gene3D G3DSA:3.30.450.330 222 560 1.8E-114 T 14-10-2018 DB29_03911 ada252be361a469cec78c84cdaa238a9 644 Gene3D G3DSA:3.40.710.10 283 478 1.8E-114 T 14-10-2018 DB29_03911 ada252be361a469cec78c84cdaa238a9 644 Gene3D G3DSA:3.30.10.20 583 637 2.1E-5 T 14-10-2018 DB29_03911 ada252be361a469cec78c84cdaa238a9 644 SUPERFAMILY SSF56601 171 565 3.09E-104 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like DB29_03911 ada252be361a469cec78c84cdaa238a9 644 SUPERFAMILY SSF54184 584 637 2.62E-10 T 14-10-2018 DB29_03911 ada252be361a469cec78c84cdaa238a9 644 SUPERFAMILY SSF56519 52 220 9.55E-44 T 14-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 DB29_03911 ada252be361a469cec78c84cdaa238a9 644 Pfam PF03793 PASTA domain 584 636 2.6E-8 T 14-10-2018 IPR005543 PASTA domain DB29_03911 ada252be361a469cec78c84cdaa238a9 644 Pfam PF03717 Penicillin-binding Protein dimerisation domain 56 201 1.8E-19 T 14-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 DB29_03911 ada252be361a469cec78c84cdaa238a9 644 Gene3D G3DSA:3.90.1310.30 50 220 5.2E-44 T 14-10-2018 DB29_03911 ada252be361a469cec78c84cdaa238a9 644 TIGRFAM TIGR02214 spoVD_pbp: stage V sporulation protein D 16 638 1.3E-250 T 14-10-2018 IPR011927 Stage V sporulation protein D DB29_02441 c8351856e43dc7f440387506534ab9c1 307 PIRSF PIRSF030050 1 307 3.2E-135 T 14-10-2018 IPR016943 Uncharacterised conserved protein UCP030050, HTH transcriptional regulator, BH1869 DB29_02441 c8351856e43dc7f440387506534ab9c1 307 SMART SM00418 14 82 0.005 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DB29_02441 c8351856e43dc7f440387506534ab9c1 307 SUPERFAMILY SSF46785 12 214 6.25E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_02441 c8351856e43dc7f440387506534ab9c1 307 Gene3D G3DSA:1.10.10.10 3 101 5.7E-10 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_02441 c8351856e43dc7f440387506534ab9c1 307 Pfam PF12840 Helix-turn-helix domain 15 67 1.2E-6 T 14-10-2018 DB29_02221 8598ed884e36423d48e077ab99061c4c 572 Gene3D G3DSA:1.20.1560.10 1 314 6.2E-82 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DB29_02221 8598ed884e36423d48e077ab99061c4c 572 ProSitePatterns PS00211 ABC transporters family signature. 470 484 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB29_02221 8598ed884e36423d48e077ab99061c4c 572 Gene3D G3DSA:3.40.50.300 329 571 3.2E-91 T 14-10-2018 DB29_02221 8598ed884e36423d48e077ab99061c4c 572 SMART SM00382 358 544 1.2E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_02221 8598ed884e36423d48e077ab99061c4c 572 SUPERFAMILY SSF90123 3 321 3.4E-79 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DB29_02221 8598ed884e36423d48e077ab99061c4c 572 Pfam PF00005 ABC transporter 349 498 5.0E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB29_02221 8598ed884e36423d48e077ab99061c4c 572 SUPERFAMILY SSF52540 322 568 2.22E-92 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_02221 8598ed884e36423d48e077ab99061c4c 572 Pfam PF00664 ABC transporter transmembrane region 17 286 4.5E-55 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 DB29_00881 45198ae8350fceccbc0ea0d3d89b3abf 489 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 255 262 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 DB29_00881 45198ae8350fceccbc0ea0d3d89b3abf 489 Gene3D G3DSA:3.40.309.10 260 454 1.5E-166 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 DB29_00881 45198ae8350fceccbc0ea0d3d89b3abf 489 Pfam PF00171 Aldehyde dehydrogenase family 19 485 7.1E-169 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 DB29_00881 45198ae8350fceccbc0ea0d3d89b3abf 489 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 283 294 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 DB29_00881 45198ae8350fceccbc0ea0d3d89b3abf 489 Gene3D G3DSA:3.40.605.10 15 483 1.5E-166 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 DB29_00881 45198ae8350fceccbc0ea0d3d89b3abf 489 SUPERFAMILY SSF53720 5 488 2.09E-160 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 DB29_00221 58e44513626e1e2a2a060a04bb781109 374 Gene3D G3DSA:3.30.70.150 1 111 6.9E-22 T 14-10-2018 IPR036422 RuBisCO large subunit, N-terminal domain superfamily GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 DB29_00221 58e44513626e1e2a2a060a04bb781109 374 Gene3D G3DSA:3.20.20.110 112 374 8.0E-80 T 14-10-2018 IPR036376 Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamily GO:0000287 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 DB29_00221 58e44513626e1e2a2a060a04bb781109 374 SUPERFAMILY SSF51649 111 372 3.14E-72 T 14-10-2018 IPR036376 Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamily GO:0000287 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 DB29_00221 58e44513626e1e2a2a060a04bb781109 374 SUPERFAMILY SSF54966 3 111 1.26E-21 T 14-10-2018 IPR036422 RuBisCO large subunit, N-terminal domain superfamily GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 DB29_00221 58e44513626e1e2a2a060a04bb781109 374 Pfam PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain 117 372 8.1E-33 T 14-10-2018 IPR000685 Ribulose bisphosphate carboxylase, large subunit, C-terminal GO:0000287 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 DB29_02916 fad219c6bca6ea18912c73d0cdda2e4f 355 PIRSF PIRSF001123 2 349 4.1E-87 T 14-10-2018 IPR008007 Peptidase M42 DB29_02916 fad219c6bca6ea18912c73d0cdda2e4f 355 Gene3D G3DSA:3.40.630.10 9 336 6.1E-100 T 14-10-2018 DB29_02916 fad219c6bca6ea18912c73d0cdda2e4f 355 SUPERFAMILY SSF101821 70 174 7.63E-20 T 14-10-2018 DB29_02916 fad219c6bca6ea18912c73d0cdda2e4f 355 SUPERFAMILY SSF53187 7 341 1.59E-60 T 14-10-2018 DB29_02916 fad219c6bca6ea18912c73d0cdda2e4f 355 Gene3D G3DSA:2.40.30.40 70 158 6.1E-100 T 14-10-2018 IPR023367 Peptidase M42, domain 2 DB29_02916 fad219c6bca6ea18912c73d0cdda2e4f 355 Pfam PF05343 M42 glutamyl aminopeptidase 46 333 3.4E-73 T 14-10-2018 IPR008007 Peptidase M42 DB29_01939 5a289554eaab65eb63e84aea78672af2 274 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 17 32 - T 14-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DB29_01939 5a289554eaab65eb63e84aea78672af2 274 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 16 266 7.5E-99 T 14-10-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 DB29_01939 5a289554eaab65eb63e84aea78672af2 274 SUPERFAMILY SSF51717 6 268 4.58E-101 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DB29_01939 5a289554eaab65eb63e84aea78672af2 274 Pfam PF00809 Pterin binding enzyme 18 251 6.9E-85 T 14-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DB29_01939 5a289554eaab65eb63e84aea78672af2 274 Gene3D G3DSA:3.20.20.20 3 271 2.5E-112 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DB29_01939 5a289554eaab65eb63e84aea78672af2 274 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 51 64 - T 14-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DB29_03242 99a4825051fe30466a3002bb985885ce 277 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 11 256 2.2E-72 T 14-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 DB29_03242 99a4825051fe30466a3002bb985885ce 277 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 7 261 17.323 T 14-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 DB29_03242 99a4825051fe30466a3002bb985885ce 277 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 3 261 2.6E-77 T 14-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 DB29_03242 99a4825051fe30466a3002bb985885ce 277 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 136 148 - T 14-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 DB29_03757 b088575a14cecacee9b53bcfea02da6a 341 SUPERFAMILY SSF52540 9 301 3.65E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_03757 b088575a14cecacee9b53bcfea02da6a 341 Gene3D G3DSA:3.30.450.90 2 110 3.4E-22 T 14-10-2018 DB29_03757 b088575a14cecacee9b53bcfea02da6a 341 Pfam PF00437 Type II/IV secretion system protein 11 272 3.6E-63 T 14-10-2018 IPR001482 Type II/IV secretion system protein DB29_03757 b088575a14cecacee9b53bcfea02da6a 341 Gene3D G3DSA:3.40.50.300 114 337 1.8E-57 T 14-10-2018 DB29_03757 b088575a14cecacee9b53bcfea02da6a 341 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 204 218 - T 14-10-2018 IPR001482 Type II/IV secretion system protein DB29_02054 74465502d6fc553238c78b7cdc3a0199 641 PRINTS PR00418 DNA topoisomerase II family signature 426 440 2.2E-72 T 14-10-2018 DB29_02054 74465502d6fc553238c78b7cdc3a0199 641 PRINTS PR00418 DNA topoisomerase II family signature 492 508 2.2E-72 T 14-10-2018 DB29_02054 74465502d6fc553238c78b7cdc3a0199 641 PRINTS PR00418 DNA topoisomerase II family signature 510 527 2.2E-72 T 14-10-2018 DB29_02054 74465502d6fc553238c78b7cdc3a0199 641 PRINTS PR00418 DNA topoisomerase II family signature 74 87 2.2E-72 T 14-10-2018 DB29_02054 74465502d6fc553238c78b7cdc3a0199 641 PRINTS PR00418 DNA topoisomerase II family signature 573 589 2.2E-72 T 14-10-2018 DB29_02054 74465502d6fc553238c78b7cdc3a0199 641 PRINTS PR00418 DNA topoisomerase II family signature 39 54 2.2E-72 T 14-10-2018 DB29_02054 74465502d6fc553238c78b7cdc3a0199 641 PRINTS PR00418 DNA topoisomerase II family signature 117 131 2.2E-72 T 14-10-2018 DB29_02054 74465502d6fc553238c78b7cdc3a0199 641 PRINTS PR00418 DNA topoisomerase II family signature 274 287 2.2E-72 T 14-10-2018 DB29_02054 74465502d6fc553238c78b7cdc3a0199 641 PRINTS PR00418 DNA topoisomerase II family signature 530 542 2.2E-72 T 14-10-2018 DB29_02054 74465502d6fc553238c78b7cdc3a0199 641 ProSitePatterns PS00177 DNA topoisomerase II signature. 428 436 - T 14-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 DB29_02054 74465502d6fc553238c78b7cdc3a0199 641 SMART SM00433 39 634 0.0 T 14-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 DB29_02054 74465502d6fc553238c78b7cdc3a0199 641 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 37 178 2.1E-22 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DB29_02054 74465502d6fc553238c78b7cdc3a0199 641 PRINTS PR01159 DNA gyrase subunit B signature 185 200 1.8E-79 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 DB29_02054 74465502d6fc553238c78b7cdc3a0199 641 PRINTS PR01159 DNA gyrase subunit B signature 318 334 1.8E-79 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 DB29_02054 74465502d6fc553238c78b7cdc3a0199 641 PRINTS PR01159 DNA gyrase subunit B signature 10 20 1.8E-79 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 DB29_02054 74465502d6fc553238c78b7cdc3a0199 641 PRINTS PR01159 DNA gyrase subunit B signature 200 213 1.8E-79 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 DB29_02054 74465502d6fc553238c78b7cdc3a0199 641 PRINTS PR01159 DNA gyrase subunit B signature 476 485 1.8E-79 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 DB29_02054 74465502d6fc553238c78b7cdc3a0199 641 PRINTS PR01159 DNA gyrase subunit B signature 226 248 1.8E-79 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 DB29_02054 74465502d6fc553238c78b7cdc3a0199 641 PRINTS PR01159 DNA gyrase subunit B signature 610 626 1.8E-79 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 DB29_02054 74465502d6fc553238c78b7cdc3a0199 641 PRINTS PR01159 DNA gyrase subunit B signature 380 400 1.8E-79 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 DB29_02054 74465502d6fc553238c78b7cdc3a0199 641 PRINTS PR01159 DNA gyrase subunit B signature 594 606 1.8E-79 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 DB29_02054 74465502d6fc553238c78b7cdc3a0199 641 PRINTS PR01159 DNA gyrase subunit B signature 366 380 1.8E-79 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 DB29_02054 74465502d6fc553238c78b7cdc3a0199 641 Pfam PF00204 DNA gyrase B 227 396 4.3E-65 T 14-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 DB29_02054 74465502d6fc553238c78b7cdc3a0199 641 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 7 641 95.643 T 14-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 DB29_02054 74465502d6fc553238c78b7cdc3a0199 641 Gene3D G3DSA:3.40.50.670 404 641 2.8E-108 T 14-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 DB29_02054 74465502d6fc553238c78b7cdc3a0199 641 Gene3D G3DSA:3.30.565.10 6 226 1.5E-92 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB29_02054 74465502d6fc553238c78b7cdc3a0199 641 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 569 630 3.6E-29 T 14-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 DB29_02054 74465502d6fc553238c78b7cdc3a0199 641 SMART SM00387 35 179 2.7E-24 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DB29_02054 74465502d6fc553238c78b7cdc3a0199 641 Gene3D G3DSA:3.30.230.10 227 398 1.5E-74 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DB29_02054 74465502d6fc553238c78b7cdc3a0199 641 SUPERFAMILY SSF56719 400 632 3.4E-91 T 14-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 DB29_02054 74465502d6fc553238c78b7cdc3a0199 641 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 10 641 0.0 T 14-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 DB29_02054 74465502d6fc553238c78b7cdc3a0199 641 SUPERFAMILY SSF54211 227 397 4.74E-63 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DB29_02054 74465502d6fc553238c78b7cdc3a0199 641 Pfam PF01751 Toprim domain 425 536 1.1E-18 T 14-10-2018 IPR006171 TOPRIM domain DB29_02054 74465502d6fc553238c78b7cdc3a0199 641 SUPERFAMILY SSF55874 10 217 1.7E-72 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB29_03312 075d46d4648815639098c02ea9cd3989 128 SUPERFAMILY SSF51230 4 126 1.83E-47 T 14-10-2018 IPR011053 Single hybrid motif DB29_03312 075d46d4648815639098c02ea9cd3989 128 Pfam PF01597 Glycine cleavage H-protein 8 127 3.6E-51 T 14-10-2018 IPR033753 Glycine cleavage system H-protein/Simiate DB29_03312 075d46d4648815639098c02ea9cd3989 128 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 48 77 - T 14-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 DB29_03312 075d46d4648815639098c02ea9cd3989 128 Gene3D G3DSA:2.40.50.100 2 128 1.1E-54 T 14-10-2018 DB29_03312 075d46d4648815639098c02ea9cd3989 128 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 4 128 9.5E-57 T 14-10-2018 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 DB29_03312 075d46d4648815639098c02ea9cd3989 128 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 5 126 41.615 T 14-10-2018 IPR002930 Glycine cleavage system H-protein GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 DB29_01633 fcde3656a5e43543311e83817f2c53c4 329 SMART SM00850 229 328 1.7E-31 T 14-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 DB29_01633 fcde3656a5e43543311e83817f2c53c4 329 PIRSF PIRSF036612 1 329 6.2E-83 T 14-10-2018 IPR012046 LytTR transcriptional regulator with ABC transporter ATP-binding domain DB29_01633 fcde3656a5e43543311e83817f2c53c4 329 Gene3D G3DSA:3.40.50.300 3 213 3.7E-17 T 14-10-2018 DB29_01633 fcde3656a5e43543311e83817f2c53c4 329 SUPERFAMILY SSF52540 8 185 4.31E-17 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_01633 fcde3656a5e43543311e83817f2c53c4 329 Pfam PF04397 LytTr DNA-binding domain 229 327 4.1E-24 T 14-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 DB29_01633 fcde3656a5e43543311e83817f2c53c4 329 Gene3D G3DSA:2.40.50.40 220 289 1.3E-14 T 14-10-2018 DB29_00729 e35840bc9f43106f523ce02aa3953a2a 625 Gene3D G3DSA:3.40.50.300 372 624 1.0E-89 T 14-10-2018 DB29_00729 e35840bc9f43106f523ce02aa3953a2a 625 Pfam PF00664 ABC transporter transmembrane region 67 340 2.4E-56 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 DB29_00729 e35840bc9f43106f523ce02aa3953a2a 625 SUPERFAMILY SSF52540 377 618 1.38E-88 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_00729 e35840bc9f43106f523ce02aa3953a2a 625 Pfam PF00005 ABC transporter 400 549 1.3E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB29_00729 e35840bc9f43106f523ce02aa3953a2a 625 SUPERFAMILY SSF90123 50 369 7.85E-84 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DB29_00729 e35840bc9f43106f523ce02aa3953a2a 625 SMART SM00382 409 595 1.0E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_00729 e35840bc9f43106f523ce02aa3953a2a 625 ProSitePatterns PS00211 ABC transporters family signature. 521 535 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB29_00729 e35840bc9f43106f523ce02aa3953a2a 625 Gene3D G3DSA:1.20.1560.10 32 371 5.9E-105 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DB29_03561 eeb9b029d995c129ba56c64bd512a7e9 167 Gene3D G3DSA:3.30.110.10 72 167 5.2E-36 T 14-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 DB29_03561 eeb9b029d995c129ba56c64bd512a7e9 167 SUPERFAMILY SSF55200 78 166 5.1E-32 T 14-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 DB29_03561 eeb9b029d995c129ba56c64bd512a7e9 167 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 3 165 2.4E-73 T 14-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 DB29_03561 eeb9b029d995c129ba56c64bd512a7e9 167 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 79 164 1.4E-37 T 14-10-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 DB29_03561 eeb9b029d995c129ba56c64bd512a7e9 167 Gene3D G3DSA:3.10.20.80 1 71 4.6E-35 T 14-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 DB29_03561 eeb9b029d995c129ba56c64bd512a7e9 167 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 3 72 8.0E-34 T 14-10-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 DB29_03561 eeb9b029d995c129ba56c64bd512a7e9 167 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 1 166 29.736 T 14-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 DB29_03561 eeb9b029d995c129ba56c64bd512a7e9 167 SUPERFAMILY SSF54364 2 74 2.35E-30 T 14-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 DB29_03561 eeb9b029d995c129ba56c64bd512a7e9 167 ProSitePatterns PS00938 Initiation factor 3 signature. 54 67 - T 14-10-2018 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 DB29_03275 67ece926d3d937b19555119e50aa88c0 364 SUPERFAMILY SSF48452 92 275 9.48E-13 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DB29_03275 67ece926d3d937b19555119e50aa88c0 364 Pfam PF13432 Tetratricopeptide repeat 215 278 9.4E-4 T 14-10-2018 DB29_03275 67ece926d3d937b19555119e50aa88c0 364 Gene3D G3DSA:1.25.40.10 1 357 6.9E-79 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DB29_03275 67ece926d3d937b19555119e50aa88c0 364 SMART SM00028 209 242 3.9 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DB29_03275 67ece926d3d937b19555119e50aa88c0 364 SMART SM00028 248 281 35.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DB29_03275 67ece926d3d937b19555119e50aa88c0 364 SMART SM00028 91 124 130.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DB29_03275 67ece926d3d937b19555119e50aa88c0 364 SMART SM00028 171 204 370.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DB29_00651 1aa054dbbf44b68ed8226b10cb5259a6 133 Pfam PF01042 Endoribonuclease L-PSP 20 131 2.9E-16 T 14-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 DB29_00651 1aa054dbbf44b68ed8226b10cb5259a6 133 Gene3D G3DSA:3.30.1330.40 1 133 8.1E-24 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 DB29_00651 1aa054dbbf44b68ed8226b10cb5259a6 133 SUPERFAMILY SSF55298 18 133 2.67E-22 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 DB29_02162 0e2e61b4c1e2976a8ee5af0cbd688340 645 Pfam PF00488 MutS domain V 326 506 3.8E-36 T 14-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 DB29_02162 0e2e61b4c1e2976a8ee5af0cbd688340 645 SUPERFAMILY SSF52540 289 511 1.35E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_02162 0e2e61b4c1e2976a8ee5af0cbd688340 645 SMART SM00533 9 311 1.1E-6 T 14-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 DB29_02162 0e2e61b4c1e2976a8ee5af0cbd688340 645 SMART SM00534 323 507 2.6E-63 T 14-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 DB29_02162 0e2e61b4c1e2976a8ee5af0cbd688340 645 PIRSF PIRSF005814 1 551 6.6E-191 T 14-10-2018 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 DB29_02162 0e2e61b4c1e2976a8ee5af0cbd688340 645 PIRSF PIRSF005814 516 643 0.26 T 14-10-2018 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 DB29_02162 0e2e61b4c1e2976a8ee5af0cbd688340 645 SUPERFAMILY SSF48334 22 284 4.45E-15 T 14-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily DB29_02162 0e2e61b4c1e2976a8ee5af0cbd688340 645 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 405 421 - T 14-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 DB29_02162 0e2e61b4c1e2976a8ee5af0cbd688340 645 Gene3D G3DSA:3.40.50.300 290 586 2.9E-73 T 14-10-2018 DB29_00029 33c9cfef4a78c439322733ce07077866 276 Pfam PF01261 Xylose isomerase-like TIM barrel 22 198 7.0E-20 T 14-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain DB29_00029 33c9cfef4a78c439322733ce07077866 276 SUPERFAMILY SSF51658 1 250 1.01E-38 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily DB29_00029 33c9cfef4a78c439322733ce07077866 276 Gene3D G3DSA:3.20.20.150 2 270 1.8E-62 T 14-10-2018 DB29_02698 3292c7eefc9bde0bf684198e91263805 274 Pfam PF12730 ABC-2 family transporter protein 4 201 7.8E-8 T 14-10-2018 IPR032688 ABC-2 family transporter protein GO:0055085 DB29_00223 558661fb0dcbce59a653e3b305567de1 165 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 17 141 1.6E-52 T 14-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 DB29_00223 558661fb0dcbce59a653e3b305567de1 165 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 80 92 - T 14-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 DB29_00223 558661fb0dcbce59a653e3b305567de1 165 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 18 138 5.6E-47 T 14-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 DB29_00223 558661fb0dcbce59a653e3b305567de1 165 Gene3D G3DSA:2.70.70.10 6 164 4.6E-59 T 14-10-2018 IPR011055 Duplicated hybrid motif DB29_00223 558661fb0dcbce59a653e3b305567de1 165 SUPERFAMILY SSF51261 10 162 4.36E-57 T 14-10-2018 IPR011055 Duplicated hybrid motif DB29_01235 1df68ecfcb52339d4965aa9034c91072 302 SUPERFAMILY SSF103481 42 152 1.06E-7 T 14-10-2018 DB29_01235 1df68ecfcb52339d4965aa9034c91072 302 Pfam PF00892 EamA-like transporter family 164 285 8.8E-7 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DB29_01235 1df68ecfcb52339d4965aa9034c91072 302 Pfam PF00892 EamA-like transporter family 9 149 4.0E-10 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DB29_01235 1df68ecfcb52339d4965aa9034c91072 302 SUPERFAMILY SSF103481 194 288 3.07E-10 T 14-10-2018 DB29_01235 1df68ecfcb52339d4965aa9034c91072 302 TIGRFAM TIGR00688 rarD: protein RarD 10 262 1.5E-66 T 14-10-2018 IPR004626 RarD protein GO:0005887 DB29_01718 ea523de6ff2803ee9ff38315eb2ef00d 166 SUPERFAMILY SSF48452 47 163 8.13E-9 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DB29_01718 ea523de6ff2803ee9ff38315eb2ef00d 166 Gene3D G3DSA:1.25.40.10 2 162 4.2E-31 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DB29_02122 d5fa87403d73d5765342faf3c2355e7b 597 PRINTS PR00344 Bacterial sensor protein C-terminal signature 535 553 4.5E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB29_02122 d5fa87403d73d5765342faf3c2355e7b 597 PRINTS PR00344 Bacterial sensor protein C-terminal signature 507 521 4.5E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB29_02122 d5fa87403d73d5765342faf3c2355e7b 597 PRINTS PR00344 Bacterial sensor protein C-terminal signature 562 575 4.5E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB29_02122 d5fa87403d73d5765342faf3c2355e7b 597 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 475 576 1.6E-12 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DB29_02122 d5fa87403d73d5765342faf3c2355e7b 597 Gene3D G3DSA:3.30.565.10 425 579 2.8E-20 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB29_02122 d5fa87403d73d5765342faf3c2355e7b 597 SUPERFAMILY SSF55874 432 575 3.54E-21 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB29_02122 d5fa87403d73d5765342faf3c2355e7b 597 SMART SM00387 470 578 1.5E-9 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DB29_02122 d5fa87403d73d5765342faf3c2355e7b 597 Pfam PF06580 Histidine kinase 376 455 3.6E-24 T 14-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 DB29_02122 d5fa87403d73d5765342faf3c2355e7b 597 Pfam PF13492 GAF domain 242 362 4.5E-10 T 14-10-2018 IPR003018 GAF domain GO:0005515 DB29_02122 d5fa87403d73d5765342faf3c2355e7b 597 Pfam PF07694 5TMR of 5TMR-LYT 26 206 1.3E-51 T 14-10-2018 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region GO:0000155|GO:0000160|GO:0004673|GO:0016021|GO:0071555 DB29_02122 d5fa87403d73d5765342faf3c2355e7b 597 Gene3D G3DSA:3.30.450.40 239 362 3.9E-6 T 14-10-2018 IPR029016 GAF-like domain superfamily DB29_02122 d5fa87403d73d5765342faf3c2355e7b 597 SUPERFAMILY SSF55781 253 365 1.05E-6 T 14-10-2018 DB29_01354 db6baf3b0ebeb6a16bf9b73103831d1e 223 Gene3D G3DSA:1.20.910.10 1 223 2.4E-72 T 14-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 DB29_01354 db6baf3b0ebeb6a16bf9b73103831d1e 223 PIRSF PIRSF003170 1 219 3.4E-33 T 14-10-2018 IPR026285 TenA_E protein DB29_01354 db6baf3b0ebeb6a16bf9b73103831d1e 223 SUPERFAMILY SSF48613 1 215 7.86E-73 T 14-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 DB29_01354 db6baf3b0ebeb6a16bf9b73103831d1e 223 Pfam PF03070 TENA/THI-4/PQQC family 9 216 1.8E-57 T 14-10-2018 IPR004305 Thiaminase-2/PQQC DB29_01354 db6baf3b0ebeb6a16bf9b73103831d1e 223 TIGRFAM TIGR04306 salvage_TenA: thiaminase II 11 216 4.1E-68 T 14-10-2018 IPR027574 Thiaminase II GO:0006772|GO:0050334 KEGG: 00730+3.5.99.2|MetaCyc: PWY-6899|MetaCyc: PWY-7356 DB29_03606 7309accec15d305a48685ad6fb73e2d4 554 SUPERFAMILY SSF143975 1 372 1.57E-136 T 14-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 DB29_03606 7309accec15d305a48685ad6fb73e2d4 554 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 119 129 - T 14-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 DB29_03606 7309accec15d305a48685ad6fb73e2d4 554 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 14 553 2.1E-246 T 14-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 DB29_03606 7309accec15d305a48685ad6fb73e2d4 554 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 1 553 47.017 T 14-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 DB29_03606 7309accec15d305a48685ad6fb73e2d4 554 Gene3D G3DSA:3.50.30.80 373 523 3.3E-58 T 14-10-2018 DB29_03606 7309accec15d305a48685ad6fb73e2d4 554 Pfam PF00920 Dehydratase family 31 549 5.5E-224 T 14-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 DB29_03606 7309accec15d305a48685ad6fb73e2d4 554 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 461 472 - T 14-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 DB29_03606 7309accec15d305a48685ad6fb73e2d4 554 SUPERFAMILY SSF52016 373 553 4.0E-64 T 14-10-2018 DB29_00787 3ebfda4fc97b25d6e95e44a3fa245acd 119 Gene3D G3DSA:1.20.120.450 2 119 5.1E-7 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes DB29_00787 3ebfda4fc97b25d6e95e44a3fa245acd 119 Pfam PF07606 Protein of unknown function (DUF1569) 4 118 4.0E-7 T 14-10-2018 IPR011463 Protein of unknown function DUF1569 DB29_02437 0f4635a41508053511fe45b5778503ab 212 Gene3D G3DSA:3.40.109.10 2 211 2.3E-57 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 DB29_02437 0f4635a41508053511fe45b5778503ab 212 Pfam PF00881 Nitroreductase family 14 192 5.9E-32 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 DB29_02437 0f4635a41508053511fe45b5778503ab 212 SUPERFAMILY SSF55469 9 211 1.31E-56 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 DB29_02637 8a71a0fdc151dc090c679fd781904774 421 Gene3D G3DSA:3.40.190.10 17 418 2.0E-79 T 14-10-2018 DB29_02637 8a71a0fdc151dc090c679fd781904774 421 Pfam PF13416 Bacterial extracellular solute-binding protein 51 357 1.3E-30 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein DB29_02637 8a71a0fdc151dc090c679fd781904774 421 SUPERFAMILY SSF53850 15 418 3.4E-64 T 14-10-2018 DB29_01240 e9aa4849f49172031392bfd2dc018107 446 Gene3D G3DSA:1.20.1740.10 5 443 9.0E-74 T 14-10-2018 DB29_01240 e9aa4849f49172031392bfd2dc018107 446 Pfam PF00324 Amino acid permease 28 402 6.4E-41 T 14-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 DB29_01240 e9aa4849f49172031392bfd2dc018107 446 PIRSF PIRSF006060 2 446 3.1E-69 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 DB29_01768 75a0569127afa1e435d87d88b5b310a8 801 SUPERFAMILY SSF51445 253 600 5.27E-68 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily DB29_01768 75a0569127afa1e435d87d88b5b310a8 801 Gene3D G3DSA:2.60.40.1180 636 685 1.0E-12 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta DB29_01768 75a0569127afa1e435d87d88b5b310a8 801 Pfam PF01055 Glycosyl hydrolases family 31 245 689 8.5E-121 T 14-10-2018 IPR000322 Glycoside hydrolase family 31 GO:0004553|GO:0005975 DB29_01768 75a0569127afa1e435d87d88b5b310a8 801 Gene3D G3DSA:2.60.40.1760 7 249 1.9E-41 T 14-10-2018 DB29_01768 75a0569127afa1e435d87d88b5b310a8 801 Gene3D G3DSA:2.60.40.1180 686 794 3.2E-11 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta DB29_01768 75a0569127afa1e435d87d88b5b310a8 801 SUPERFAMILY SSF74650 6 252 2.23E-48 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 DB29_01768 75a0569127afa1e435d87d88b5b310a8 801 SUPERFAMILY SSF51011 603 684 1.15E-17 T 14-10-2018 DB29_01768 75a0569127afa1e435d87d88b5b310a8 801 Pfam PF13802 Galactose mutarotase-like 152 220 2.6E-21 T 14-10-2018 IPR025887 Glycoside hydrolase family 31, N-terminal domain DB29_01768 75a0569127afa1e435d87d88b5b310a8 801 Gene3D G3DSA:3.20.20.80 251 633 8.6E-115 T 14-10-2018 DB29_02442 8e9ad8031d43d7e3ab70ea5131d23039 238 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 DB29_02442 8e9ad8031d43d7e3ab70ea5131d23039 238 Gene3D G3DSA:3.40.50.720 1 236 3.6E-73 T 14-10-2018 DB29_02442 8e9ad8031d43d7e3ab70ea5131d23039 238 Pfam PF00106 short chain dehydrogenase 7 197 1.5E-63 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_02442 8e9ad8031d43d7e3ab70ea5131d23039 238 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 3.8E-33 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_02442 8e9ad8031d43d7e3ab70ea5131d23039 238 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 3.8E-33 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_02442 8e9ad8031d43d7e3ab70ea5131d23039 238 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 3.8E-33 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_02442 8e9ad8031d43d7e3ab70ea5131d23039 238 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 3.8E-33 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_02442 8e9ad8031d43d7e3ab70ea5131d23039 238 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 3.8E-33 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_02442 8e9ad8031d43d7e3ab70ea5131d23039 238 PIRSF PIRSF000126 1 237 1.1E-66 T 14-10-2018 DB29_02442 8e9ad8031d43d7e3ab70ea5131d23039 238 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 181 0.0094 T 14-10-2018 DB29_02442 8e9ad8031d43d7e3ab70ea5131d23039 238 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 1.4E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_02442 8e9ad8031d43d7e3ab70ea5131d23039 238 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 1.4E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_02442 8e9ad8031d43d7e3ab70ea5131d23039 238 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 1.4E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_02442 8e9ad8031d43d7e3ab70ea5131d23039 238 SUPERFAMILY SSF51735 1 220 1.76E-72 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_00011 58ee21cd99a2e703bad21ff3cc17a40b 254 Pfam PF13427 Domain of unknown function (DUF4111) 146 246 9.3E-30 T 14-10-2018 IPR025184 Domain of unknown function DUF4111 DB29_00011 58ee21cd99a2e703bad21ff3cc17a40b 254 Pfam PF01909 Nucleotidyltransferase domain 16 90 5.5E-7 T 14-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 DB29_00011 58ee21cd99a2e703bad21ff3cc17a40b 254 PIRSF PIRSF000819 1 254 1.4E-116 T 14-10-2018 IPR024172 Streptomycin 3''-adenylyltransferase GO:0009012|GO:0046677 DB29_00011 58ee21cd99a2e703bad21ff3cc17a40b 254 SUPERFAMILY SSF81301 9 83 2.07E-10 T 14-10-2018 DB29_00011 58ee21cd99a2e703bad21ff3cc17a40b 254 Gene3D G3DSA:3.30.460.10 1 109 1.7E-7 T 14-10-2018 DB29_00035 4cd47d523e223ff50fdeb8081f0b0aef 113 SUPERFAMILY SSF54909 2 100 9.39E-23 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel DB29_00035 4cd47d523e223ff50fdeb8081f0b0aef 113 Gene3D G3DSA:3.30.70.100 1 108 5.6E-38 T 14-10-2018 DB29_00035 4cd47d523e223ff50fdeb8081f0b0aef 113 Pfam PF03992 Antibiotic biosynthesis monooxygenase 5 79 1.6E-14 T 14-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain DB29_03375 cdeb0c450fed862c9aba171d383718e7 568 SUPERFAMILY SSF52794 481 567 5.07E-26 T 14-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 DB29_03375 cdeb0c450fed862c9aba171d383718e7 568 Pfam PF02378 Phosphotransferase system, EIIC 20 276 8.4E-12 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 DB29_03375 cdeb0c450fed862c9aba171d383718e7 568 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 481 565 8.0E-14 T 14-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 DB29_03375 cdeb0c450fed862c9aba171d383718e7 568 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 378 462 9.0E-14 T 14-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 DB29_03375 cdeb0c450fed862c9aba171d383718e7 568 TIGRFAM TIGR00851 mtlA: PTS system, mannitol-specific IIC component 10 344 1.8E-151 T 14-10-2018 IPR004718 Phosphotransferase system, mannitol-specific enzyme IIC GO:0008982|GO:0009401|GO:0016021 KEGG: 00051+2.7.1.197 DB29_03375 cdeb0c450fed862c9aba171d383718e7 568 Gene3D G3DSA:3.40.50.2300 469 568 1.1E-38 T 14-10-2018 DB29_03375 cdeb0c450fed862c9aba171d383718e7 568 Gene3D G3DSA:3.40.50.2300 365 468 1.6E-37 T 14-10-2018 DB29_03375 cdeb0c450fed862c9aba171d383718e7 568 SUPERFAMILY SSF52794 377 466 1.46E-25 T 14-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 DB29_00561 f43d560c34f04b31a9dfdb2cfaae13d2 185 ProDom PD108804 YUFK TRANSMEMBRANE MEMBRANE PRECURSOR SIGNAL 1 185 6.0E-71 T 14-10-2018 IPR035289 Protein of unknown function DUF5366 DB29_00561 f43d560c34f04b31a9dfdb2cfaae13d2 185 Pfam PF17328 Family of unknown function (DUF5366) 28 184 1.0E-59 T 14-10-2018 IPR035289 Protein of unknown function DUF5366 DB29_01857 c1daffe4d710b8db799ff956a8b62a81 350 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 108 345 1.0E-84 T 14-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 DB29_01857 c1daffe4d710b8db799ff956a8b62a81 350 ProSitePatterns PS01215 Mrp family signature. 211 227 - T 14-10-2018 IPR000808 Mrp, conserved site GO:0005524 DB29_01857 c1daffe4d710b8db799ff956a8b62a81 350 Gene3D G3DSA:3.40.50.300 103 330 9.0E-65 T 14-10-2018 DB29_01857 c1daffe4d710b8db799ff956a8b62a81 350 SUPERFAMILY SSF52540 100 313 4.53E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_01857 c1daffe4d710b8db799ff956a8b62a81 350 Pfam PF01883 Iron-sulfur cluster assembly protein 5 65 9.6E-6 T 14-10-2018 IPR002744 MIP18 family-like DB29_01857 c1daffe4d710b8db799ff956a8b62a81 350 Hamap MF_02040 Iron-sulfur cluster carrier protein. 98 346 33.632 T 14-10-2018 IPR019591 Mrp/NBP35 ATP-binding protein DB29_01857 c1daffe4d710b8db799ff956a8b62a81 350 SUPERFAMILY SSF117916 1 76 8.17E-9 T 14-10-2018 IPR034904 Fe-S cluster assembly domain superfamily DB29_01857 c1daffe4d710b8db799ff956a8b62a81 350 Gene3D G3DSA:3.30.300.130 2 88 1.4E-6 T 14-10-2018 IPR034904 Fe-S cluster assembly domain superfamily DB29_03526 ad3239f32384082ab4a99c03479b9799 1095 Gene3D G3DSA:3.20.20.140 6 241 1.6E-34 T 14-10-2018 DB29_03526 ad3239f32384082ab4a99c03479b9799 1095 Pfam PF01336 OB-fold nucleic acid binding domain 931 1003 7.2E-7 T 14-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 DB29_03526 ad3239f32384082ab4a99c03479b9799 1095 Gene3D G3DSA:1.10.10.1600 397 470 1.0E-10 T 14-10-2018 DB29_03526 ad3239f32384082ab4a99c03479b9799 1095 Pfam PF02811 PHP domain 9 110 3.4E-16 T 14-10-2018 IPR004013 PHP domain GO:0003824 DB29_03526 ad3239f32384082ab4a99c03479b9799 1095 SMART SM00481 4 71 1.4E-12 T 14-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal DB29_03526 ad3239f32384082ab4a99c03479b9799 1095 Pfam PF14579 Helix-hairpin-helix motif 756 843 5.1E-20 T 14-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DB29_03526 ad3239f32384082ab4a99c03479b9799 1095 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 265 683 2.2E-156 T 14-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DB29_03526 ad3239f32384082ab4a99c03479b9799 1095 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 8 968 6.3E-278 T 14-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DB29_03526 ad3239f32384082ab4a99c03479b9799 1095 SUPERFAMILY SSF89550 10 97 6.08E-10 T 14-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 DB29_03526 ad3239f32384082ab4a99c03479b9799 1095 SUPERFAMILY SSF50249 916 991 4.11E-6 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DB29_01720 2d55e53f466fbdf9afa652a470788865 469 Gene3D G3DSA:3.30.300.30 370 467 3.4E-21 T 14-10-2018 DB29_01720 2d55e53f466fbdf9afa652a470788865 469 Pfam PF00501 AMP-binding enzyme 15 373 5.1E-46 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 DB29_01720 2d55e53f466fbdf9afa652a470788865 469 ProSitePatterns PS00455 Putative AMP-binding domain signature. 145 156 - T 14-10-2018 IPR020845 AMP-binding, conserved site DB29_01720 2d55e53f466fbdf9afa652a470788865 469 Pfam PF13193 AMP-binding enzyme C-terminal domain 382 457 1.5E-9 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain DB29_01720 2d55e53f466fbdf9afa652a470788865 469 SUPERFAMILY SSF56801 6 465 5.1E-89 T 14-10-2018 DB29_01720 2d55e53f466fbdf9afa652a470788865 469 Gene3D G3DSA:3.40.50.12780 5 369 4.6E-62 T 14-10-2018 DB29_01682 3af9150a1df77b5d57ab4f47e680dd13 300 PIRSF PIRSF036979 2 294 1.0E-63 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 DB29_01682 3af9150a1df77b5d57ab4f47e680dd13 300 PRINTS PR00116 Arginase signature 101 116 7.1E-10 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 DB29_01682 3af9150a1df77b5d57ab4f47e680dd13 300 PRINTS PR00116 Arginase signature 217 246 7.1E-10 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 DB29_01682 3af9150a1df77b5d57ab4f47e680dd13 300 SUPERFAMILY SSF52768 7 290 5.58E-72 T 14-10-2018 IPR023696 Ureohydrolase domain superfamily DB29_01682 3af9150a1df77b5d57ab4f47e680dd13 300 ProSitePatterns PS01053 Arginase family signature. 220 241 - T 14-10-2018 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 DB29_01682 3af9150a1df77b5d57ab4f47e680dd13 300 Gene3D G3DSA:3.40.800.10 2 298 7.6E-76 T 14-10-2018 DB29_01682 3af9150a1df77b5d57ab4f47e680dd13 300 Pfam PF00491 Arginase family 7 287 2.2E-74 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 DB29_00432 7c79a93dfe3adc85665222d73198794d 374 Gene3D G3DSA:3.40.50.620 2 222 1.3E-98 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DB29_00432 7c79a93dfe3adc85665222d73198794d 374 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 17 367 41.043 T 14-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 DB29_00432 7c79a93dfe3adc85665222d73198794d 374 Pfam PF03054 tRNA methyl transferase 18 366 1.3E-143 T 14-10-2018 DB29_00432 7c79a93dfe3adc85665222d73198794d 374 Gene3D G3DSA:2.40.30.10 288 372 6.2E-30 T 14-10-2018 DB29_00432 7c79a93dfe3adc85665222d73198794d 374 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 18 366 6.3E-137 T 14-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 DB29_00432 7c79a93dfe3adc85665222d73198794d 374 SUPERFAMILY SSF52402 12 301 1.21E-58 T 14-10-2018 DB29_00432 7c79a93dfe3adc85665222d73198794d 374 Gene3D G3DSA:2.30.30.280 223 287 1.8E-23 T 14-10-2018 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 DB29_01223 6579b36a4788a87a0ae906758289fd04 312 Gene3D G3DSA:3.50.30.60 155 308 4.0E-45 T 14-10-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily DB29_01223 6579b36a4788a87a0ae906758289fd04 312 PIRSF PIRSF028757 3 307 2.6E-89 T 14-10-2018 IPR003507 Peptidase family S66 DB29_01223 6579b36a4788a87a0ae906758289fd04 312 SUPERFAMILY SSF52317 3 143 2.06E-47 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like DB29_01223 6579b36a4788a87a0ae906758289fd04 312 SUPERFAMILY SSF141986 163 300 2.35E-43 T 14-10-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily DB29_01223 6579b36a4788a87a0ae906758289fd04 312 Pfam PF02016 LD-carboxypeptidase 15 294 4.0E-80 T 14-10-2018 IPR003507 Peptidase family S66 DB29_01223 6579b36a4788a87a0ae906758289fd04 312 Gene3D G3DSA:3.40.50.10740 2 154 4.9E-53 T 14-10-2018 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal DB29_02318 86349cb1013e921b808ea78a1759ddd6 428 SUPERFAMILY SSF55205 1 415 4.09E-133 T 14-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 DB29_02318 86349cb1013e921b808ea78a1759ddd6 428 Gene3D G3DSA:3.65.10.10 6 412 9.3E-158 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 DB29_02318 86349cb1013e921b808ea78a1759ddd6 428 Gene3D G3DSA:3.65.10.10 21 228 9.3E-158 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 DB29_02318 86349cb1013e921b808ea78a1759ddd6 428 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 405 4.5E-95 T 14-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 DB29_02318 86349cb1013e921b808ea78a1759ddd6 428 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 414 9.1E-169 T 14-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DB29_02318 86349cb1013e921b808ea78a1759ddd6 428 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 415 42.237 T 14-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DB29_00556 8d60a6814f631a9fe29a1cda7966e4b1 189 SUPERFAMILY SSF51306 37 188 8.55E-52 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily DB29_00556 8d60a6814f631a9fe29a1cda7966e4b1 189 ProSitePatterns PS00760 Signal peptidases I lysine active site. 91 103 - T 14-10-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 DB29_00556 8d60a6814f631a9fe29a1cda7966e4b1 189 Pfam PF00717 Peptidase S24-like 45 113 1.2E-17 T 14-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C DB29_00556 8d60a6814f631a9fe29a1cda7966e4b1 189 ProSitePatterns PS00761 Signal peptidases I signature 3. 147 160 - T 14-10-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 DB29_00556 8d60a6814f631a9fe29a1cda7966e4b1 189 Gene3D G3DSA:2.10.109.10 69 188 5.3E-43 T 14-10-2018 DB29_00556 8d60a6814f631a9fe29a1cda7966e4b1 189 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 22 182 5.0E-54 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 DB29_00556 8d60a6814f631a9fe29a1cda7966e4b1 189 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 39 55 3.0E-19 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 DB29_00556 8d60a6814f631a9fe29a1cda7966e4b1 189 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 142 161 3.0E-19 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 DB29_00556 8d60a6814f631a9fe29a1cda7966e4b1 189 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 89 101 3.0E-19 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 DB29_02220 23c3c29f7b766ae8905dd31e64fc82a3 312 Gene3D G3DSA:3.90.78.10 220 311 6.3E-35 T 14-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DB29_02220 23c3c29f7b766ae8905dd31e64fc82a3 312 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 312 91.809 T 14-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DB29_02220 23c3c29f7b766ae8905dd31e64fc82a3 312 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 203 301 8.9E-31 T 14-10-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DB29_02220 23c3c29f7b766ae8905dd31e64fc82a3 312 Gene3D G3DSA:3.30.43.10 10 92 8.9E-25 T 14-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 DB29_02220 23c3c29f7b766ae8905dd31e64fc82a3 312 SUPERFAMILY SSF56176 9 198 7.63E-45 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 DB29_02220 23c3c29f7b766ae8905dd31e64fc82a3 312 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 29 303 8.9E-74 T 14-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DB29_02220 23c3c29f7b766ae8905dd31e64fc82a3 312 Pfam PF01565 FAD binding domain 40 168 9.2E-27 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 DB29_02220 23c3c29f7b766ae8905dd31e64fc82a3 312 SUPERFAMILY SSF56194 199 304 7.46E-39 T 14-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DB29_02220 23c3c29f7b766ae8905dd31e64fc82a3 312 Gene3D G3DSA:3.30.465.10 93 219 6.0E-42 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 DB29_01407 c187dd3bfba3b31d9a543b3bf01bd7d1 293 SUPERFAMILY SSF52540 2 222 5.13E-39 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_01407 c187dd3bfba3b31d9a543b3bf01bd7d1 293 SMART SM00382 30 208 4.1E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_01407 c187dd3bfba3b31d9a543b3bf01bd7d1 293 Gene3D G3DSA:3.40.50.300 2 243 8.1E-38 T 14-10-2018 DB29_01407 c187dd3bfba3b31d9a543b3bf01bd7d1 293 Pfam PF00005 ABC transporter 22 157 1.3E-18 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB29_00109 12c820aa95c89ff46b2c441848fd3db2 439 Gene3D G3DSA:3.40.50.300 172 354 1.7E-54 T 14-10-2018 DB29_00109 12c820aa95c89ff46b2c441848fd3db2 439 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 6 130 4.9E-20 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 DB29_00109 12c820aa95c89ff46b2c441848fd3db2 439 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 177 336 7.1E-28 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 DB29_00109 12c820aa95c89ff46b2c441848fd3db2 439 PIRSF PIRSF006485 4 439 4.6E-174 T 14-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 DB29_00109 12c820aa95c89ff46b2c441848fd3db2 439 Gene3D G3DSA:3.30.300.20 355 438 2.3E-35 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta DB29_00109 12c820aa95c89ff46b2c441848fd3db2 439 Pfam PF01926 50S ribosome-binding GTPase 180 297 5.9E-27 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 DB29_00109 12c820aa95c89ff46b2c441848fd3db2 439 Pfam PF01926 50S ribosome-binding GTPase 8 122 3.8E-25 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 DB29_00109 12c820aa95c89ff46b2c441848fd3db2 439 SUPERFAMILY SSF52540 7 169 1.71E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_00109 12c820aa95c89ff46b2c441848fd3db2 439 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 6 434 1.3E-180 T 14-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 DB29_00109 12c820aa95c89ff46b2c441848fd3db2 439 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 180 200 1.9E-6 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 DB29_00109 12c820aa95c89ff46b2c441848fd3db2 439 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 250 268 1.9E-6 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 DB29_00109 12c820aa95c89ff46b2c441848fd3db2 439 Gene3D G3DSA:3.40.50.300 3 165 9.9E-45 T 14-10-2018 DB29_00109 12c820aa95c89ff46b2c441848fd3db2 439 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 355 435 1.5E-34 T 14-10-2018 IPR032859 GTPase Der, C-terminal KH-domain-like DB29_00109 12c820aa95c89ff46b2c441848fd3db2 439 SUPERFAMILY SSF52540 141 437 1.0E-69 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_00109 12c820aa95c89ff46b2c441848fd3db2 439 Hamap MF_00195 GTPase Der [der]. 5 438 41.172 T 14-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 DB29_02076 091db4836894a1c63f72f435e257cd02 95 Pfam PF01250 Ribosomal protein S6 3 92 8.9E-29 T 14-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB29_02076 091db4836894a1c63f72f435e257cd02 95 SUPERFAMILY SSF54995 1 94 1.7E-32 T 14-10-2018 IPR035980 Ribosomal protein S6 superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB29_02076 091db4836894a1c63f72f435e257cd02 95 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 95 22.797 T 14-10-2018 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 DB29_02076 091db4836894a1c63f72f435e257cd02 95 ProSitePatterns PS01048 Ribosomal protein S6 signature. 44 53 - T 14-10-2018 IPR020815 Ribosomal protein S6, conserved site GO:0003735|GO:0005840|GO:0006412|GO:0019843 DB29_02076 091db4836894a1c63f72f435e257cd02 95 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 94 8.0E-31 T 14-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB29_02076 091db4836894a1c63f72f435e257cd02 95 Gene3D G3DSA:3.30.70.60 1 95 6.6E-34 T 14-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 DB29_00300 31a1131c4009d39029effec790ed02a8 291 Pfam PF00950 ABC 3 transport family 8 271 3.4E-64 T 14-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 DB29_00300 31a1131c4009d39029effec790ed02a8 291 SUPERFAMILY SSF81345 4 268 8.89E-35 T 14-10-2018 IPR037294 ABC transporter, BtuC-like DB29_00300 31a1131c4009d39029effec790ed02a8 291 Gene3D G3DSA:1.10.3470.10 72 278 2.0E-7 T 14-10-2018 IPR037294 ABC transporter, BtuC-like DB29_00665 d67782443b08be1c5497c773fa78b816 347 Pfam PF06081 Aromatic acid exporter family member 1 1 136 8.2E-39 T 14-10-2018 IPR010343 Aromatic acid exporter family member 1 DB29_00435 4955a5c85e3d160393b504b555a3a853 420 SUPERFAMILY SSF48019 239 418 3.97E-70 T 14-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 DB29_00435 4955a5c85e3d160393b504b555a3a853 420 Gene3D G3DSA:1.10.8.60 151 224 5.6E-22 T 14-10-2018 DB29_00435 4955a5c85e3d160393b504b555a3a853 420 Pfam PF16193 AAA C-terminal domain 173 253 8.4E-26 T 14-10-2018 IPR032423 AAA C-terminal domain DB29_00435 4955a5c85e3d160393b504b555a3a853 420 Gene3D G3DSA:1.10.3710.10 332 420 1.4E-25 T 14-10-2018 DB29_00435 4955a5c85e3d160393b504b555a3a853 420 SMART SM00382 39 151 1.5E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_00435 4955a5c85e3d160393b504b555a3a853 420 Gene3D G3DSA:3.40.50.300 1 150 1.4E-38 T 14-10-2018 DB29_00435 4955a5c85e3d160393b504b555a3a853 420 Gene3D G3DSA:1.20.272.10 228 331 2.3E-40 T 14-10-2018 DB29_00435 4955a5c85e3d160393b504b555a3a853 420 SUPERFAMILY SSF52540 3 220 9.32E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_00435 4955a5c85e3d160393b504b555a3a853 420 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 43 145 5.0E-14 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 DB29_00435 4955a5c85e3d160393b504b555a3a853 420 Pfam PF12002 MgsA AAA+ ATPase C terminal 254 418 6.6E-66 T 14-10-2018 IPR021886 MgsA AAA+ ATPase C-terminal DB29_02760 3a8e2a7521c52c6d0ced9ab54e4edb07 334 Gene3D G3DSA:3.40.50.460 141 261 9.0E-79 T 14-10-2018 DB29_02760 3a8e2a7521c52c6d0ced9ab54e4edb07 334 Gene3D G3DSA:3.40.50.450 7 295 9.0E-79 T 14-10-2018 DB29_02760 3a8e2a7521c52c6d0ced9ab54e4edb07 334 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 119 136 3.4E-47 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 DB29_02760 3a8e2a7521c52c6d0ced9ab54e4edb07 334 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 176 193 3.4E-47 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 DB29_02760 3a8e2a7521c52c6d0ced9ab54e4edb07 334 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 158 174 3.4E-47 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 DB29_02760 3a8e2a7521c52c6d0ced9ab54e4edb07 334 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 93 109 3.4E-47 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 DB29_02760 3a8e2a7521c52c6d0ced9ab54e4edb07 334 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 211 223 3.4E-47 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 DB29_02760 3a8e2a7521c52c6d0ced9ab54e4edb07 334 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 137 155 3.4E-47 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 DB29_02760 3a8e2a7521c52c6d0ced9ab54e4edb07 334 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 249 271 3.4E-47 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 DB29_02760 3a8e2a7521c52c6d0ced9ab54e4edb07 334 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 9 28 3.4E-47 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 DB29_02760 3a8e2a7521c52c6d0ced9ab54e4edb07 334 Pfam PF00365 Phosphofructokinase 6 285 1.5E-72 T 14-10-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 DB29_02760 3a8e2a7521c52c6d0ced9ab54e4edb07 334 PIRSF PIRSF000532 3 332 1.2E-74 T 14-10-2018 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type GO:0005524|GO:0006002|GO:0006096|GO:0008443 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 DB29_02760 3a8e2a7521c52c6d0ced9ab54e4edb07 334 SUPERFAMILY SSF53784 2 309 3.01E-83 T 14-10-2018 IPR035966 Phosphofructokinase superfamily GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 DB29_04022 5886d77a9967cf338e3d684a74620242 181 Pfam PF04347 Flagellar biosynthesis protein, FliO 55 158 5.7E-15 T 14-10-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 DB29_02421 fcd07b153cd936dd64fce269a061ef45 414 TIGRFAM TIGR01879 hydantase: amidase, hydantoinase/carbamoylase family 11 403 1.7E-120 T 14-10-2018 IPR010158 Amidase, carbamoylase-type GO:0016813 DB29_02421 fcd07b153cd936dd64fce269a061ef45 414 Gene3D G3DSA:3.30.70.360 214 324 5.2E-137 T 14-10-2018 DB29_02421 fcd07b153cd936dd64fce269a061ef45 414 Gene3D G3DSA:3.40.630.10 18 400 5.2E-137 T 14-10-2018 DB29_02421 fcd07b153cd936dd64fce269a061ef45 414 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 80 89 - T 14-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 DB29_02421 fcd07b153cd936dd64fce269a061ef45 414 Pfam PF07687 Peptidase dimerisation domain 214 308 5.7E-5 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain DB29_02421 fcd07b153cd936dd64fce269a061ef45 414 PIRSF PIRSF001235 5 410 1.0E-143 T 14-10-2018 IPR010158 Amidase, carbamoylase-type GO:0016813 DB29_02421 fcd07b153cd936dd64fce269a061ef45 414 Pfam PF01546 Peptidase family M20/M25/M40 82 403 7.4E-32 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 DB29_02421 fcd07b153cd936dd64fce269a061ef45 414 SUPERFAMILY SSF55031 214 314 2.84E-22 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain DB29_02421 fcd07b153cd936dd64fce269a061ef45 414 SUPERFAMILY SSF53187 6 404 1.14E-89 T 14-10-2018 DB29_04322 494f30b4a721fba7cfe3b9bf67cd6252 385 Pfam PF13769 Virulence factor 120 200 6.9E-33 T 14-10-2018 IPR025989 Virulence factor domain DB29_04322 494f30b4a721fba7cfe3b9bf67cd6252 385 Pfam PF13646 HEAT repeats 278 357 1.0E-14 T 14-10-2018 DB29_04322 494f30b4a721fba7cfe3b9bf67cd6252 385 SMART SM00567 E-Z type HEAT repeats 290 319 0.031 T 14-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 DB29_04322 494f30b4a721fba7cfe3b9bf67cd6252 385 SMART SM00567 E-Z type HEAT repeats 230 257 420.0 T 14-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 DB29_04322 494f30b4a721fba7cfe3b9bf67cd6252 385 SMART SM00567 E-Z type HEAT repeats 321 350 1.8E-4 T 14-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 DB29_04322 494f30b4a721fba7cfe3b9bf67cd6252 385 SMART SM00567 E-Z type HEAT repeats 259 288 0.0031 T 14-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 DB29_04322 494f30b4a721fba7cfe3b9bf67cd6252 385 Pfam PF08712 Scaffold protein Nfu/NifU N terminal 19 96 3.6E-19 T 14-10-2018 IPR014824 Scaffold protein Nfu/NifU, N-terminal DB29_04322 494f30b4a721fba7cfe3b9bf67cd6252 385 Gene3D G3DSA:3.30.1370.70 14 103 3.9E-27 T 14-10-2018 IPR036498 Scaffold protein Nfu/NifU, N-terminal domain superfamily DB29_04322 494f30b4a721fba7cfe3b9bf67cd6252 385 Gene3D G3DSA:1.25.10.10 206 384 1.6E-29 T 14-10-2018 IPR011989 Armadillo-like helical DB29_04322 494f30b4a721fba7cfe3b9bf67cd6252 385 SUPERFAMILY SSF48371 199 381 1.26E-35 T 14-10-2018 IPR016024 Armadillo-type fold DB29_04322 494f30b4a721fba7cfe3b9bf67cd6252 385 SMART SM00932 17 102 2.8E-25 T 14-10-2018 IPR014824 Scaffold protein Nfu/NifU, N-terminal DB29_04322 494f30b4a721fba7cfe3b9bf67cd6252 385 SUPERFAMILY SSF110836 14 99 3.66E-25 T 14-10-2018 IPR036498 Scaffold protein Nfu/NifU, N-terminal domain superfamily DB29_01806 a06c79467c2ad6dcad3798a33af82309 123 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 76 3.8E-12 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DB29_01806 a06c79467c2ad6dcad3798a33af82309 123 SUPERFAMILY SSF46785 6 85 1.04E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_01806 a06c79467c2ad6dcad3798a33af82309 123 SMART SM00345 17 76 1.8E-10 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DB29_01806 a06c79467c2ad6dcad3798a33af82309 123 Gene3D G3DSA:1.10.10.10 10 123 4.4E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_04014 03e5bc2ac2d1c11fcaea9dc08ef5cae4 522 Pfam PF02120 Flagellar hook-length control protein FliK 399 462 2.5E-12 T 14-10-2018 IPR021136 Flagellar hook-length control protein-like, C-terminal DB29_04014 03e5bc2ac2d1c11fcaea9dc08ef5cae4 522 Gene3D G3DSA:3.30.750.140 379 493 4.3E-10 T 14-10-2018 IPR038610 FliK-like, C-terminal domain superfamily DB29_01536 51c793965783a6cf28fbb9ff483f21c4 159 SUPERFAMILY SSF118196 7 157 1.83E-45 T 14-10-2018 IPR036413 YaeB-like superfamily DB29_01536 51c793965783a6cf28fbb9ff483f21c4 159 Pfam PF01980 Uncharacterised protein family UPF0066 30 136 1.6E-28 T 14-10-2018 IPR023370 YaeB-like, N-terminal domain DB29_01536 51c793965783a6cf28fbb9ff483f21c4 159 Gene3D G3DSA:2.40.30.70 1 138 2.1E-32 T 14-10-2018 IPR036414 YaeB, N-terminal domain superfamily DB29_01536 51c793965783a6cf28fbb9ff483f21c4 159 TIGRFAM TIGR00104 tRNA_TsaA: tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA 8 137 1.4E-27 T 14-10-2018 IPR023370 YaeB-like, N-terminal domain DB29_01898 2288ac7b92f9af76fed0ebb04e208e4f 91 Gene3D G3DSA:3.30.860.10 1 91 8.9E-40 T 14-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB29_01898 2288ac7b92f9af76fed0ebb04e208e4f 91 PIRSF PIRSF002144 1 91 2.1E-31 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB29_01898 2288ac7b92f9af76fed0ebb04e208e4f 91 SUPERFAMILY SSF54570 3 84 8.11E-36 T 14-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB29_01898 2288ac7b92f9af76fed0ebb04e208e4f 91 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 6.5E-24 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB29_01898 2288ac7b92f9af76fed0ebb04e208e4f 91 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 6.5E-24 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB29_01898 2288ac7b92f9af76fed0ebb04e208e4f 91 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 6.5E-24 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB29_01898 2288ac7b92f9af76fed0ebb04e208e4f 91 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 91 1.3E-46 T 14-10-2018 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 DB29_01898 2288ac7b92f9af76fed0ebb04e208e4f 91 Pfam PF00203 Ribosomal protein S19 3 83 2.0E-36 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB29_01898 2288ac7b92f9af76fed0ebb04e208e4f 91 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 14-10-2018 IPR020934 Ribosomal protein S19 conserved site GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB29_01898 2288ac7b92f9af76fed0ebb04e208e4f 91 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 25.286 T 14-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB29_01154 18f7bb9121192c44eccd345a1ff9a721 131 Pfam PF06983 3-demethylubiquinone-9 3-methyltransferase 6 127 2.9E-5 T 14-10-2018 IPR028973 PhnB-like DB29_01154 18f7bb9121192c44eccd345a1ff9a721 131 SUPERFAMILY SSF54593 1 128 1.2E-26 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DB29_01154 18f7bb9121192c44eccd345a1ff9a721 131 Gene3D G3DSA:3.10.180.10 1 131 1.0E-29 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DB29_00987 25ae71e38c0ac83b1e3fd588e1db7215 366 Gene3D G3DSA:3.40.47.10 219 361 1.5E-42 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 DB29_00987 25ae71e38c0ac83b1e3fd588e1db7215 366 Gene3D G3DSA:3.40.47.10 1 209 1.6E-66 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 DB29_00987 25ae71e38c0ac83b1e3fd588e1db7215 366 Pfam PF02797 Chalcone and stilbene synthases, C-terminal domain 224 359 3.4E-21 T 14-10-2018 IPR012328 Chalcone/stilbene synthase, C-terminal DB29_00987 25ae71e38c0ac83b1e3fd588e1db7215 366 SUPERFAMILY SSF53901 4 362 1.06E-49 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 DB29_00987 25ae71e38c0ac83b1e3fd588e1db7215 366 Pfam PF00195 Chalcone and stilbene synthases, N-terminal domain 3 204 2.1E-20 T 14-10-2018 IPR001099 Chalcone/stilbene synthase, N-terminal DB29_00987 25ae71e38c0ac83b1e3fd588e1db7215 366 PIRSF PIRSF000451 1 364 2.6E-125 T 14-10-2018 IPR011141 Polyketide synthase, type III GO:0009058|GO:0016747 DB29_00028 d449dcfc2138f9dc870ca727cb8dcb66 187 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 10 155 3.4E-30 T 14-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 DB29_00028 d449dcfc2138f9dc870ca727cb8dcb66 187 Gene3D G3DSA:3.40.50.1000 2 178 3.3E-54 T 14-10-2018 IPR023214 HAD superfamily DB29_00028 d449dcfc2138f9dc870ca727cb8dcb66 187 Pfam PF13242 HAD-hyrolase-like 108 155 1.6E-10 T 14-10-2018 DB29_00028 d449dcfc2138f9dc870ca727cb8dcb66 187 SUPERFAMILY SSF56784 9 178 1.71E-40 T 14-10-2018 IPR036412 HAD-like superfamily DB29_00028 d449dcfc2138f9dc870ca727cb8dcb66 187 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 9 154 2.3E-42 T 14-10-2018 IPR006543 Histidinol-phosphate phosphatase GO:0016791 DB29_00028 d449dcfc2138f9dc870ca727cb8dcb66 187 PIRSF PIRSF004682 1 183 1.6E-54 T 14-10-2018 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 DB29_03455 6bac6a4ae1670284a9c4c569bf036b19 310 Gene3D G3DSA:3.40.50.1100 45 144 3.8E-115 T 14-10-2018 DB29_03455 6bac6a4ae1670284a9c4c569bf036b19 310 SUPERFAMILY SSF53686 1 307 1.7E-99 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme DB29_03455 6bac6a4ae1670284a9c4c569bf036b19 310 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 8 296 1.3E-66 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme DB29_03455 6bac6a4ae1670284a9c4c569bf036b19 310 TIGRFAM TIGR01139 cysK: cysteine synthase A 8 307 5.8E-131 T 14-10-2018 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 DB29_03455 6bac6a4ae1670284a9c4c569bf036b19 310 TIGRFAM TIGR01136 cysKM: cysteine synthase 7 307 1.6E-124 T 14-10-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 DB29_03455 6bac6a4ae1670284a9c4c569bf036b19 310 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 33 51 - T 14-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 DB29_03455 6bac6a4ae1670284a9c4c569bf036b19 310 Gene3D G3DSA:3.40.50.1100 6 303 3.8E-115 T 14-10-2018 DB29_04078 ecb7ba57b620a7338201e7bae0de6b6a 537 SMART SM00487 21 217 7.6E-66 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DB29_04078 ecb7ba57b620a7338201e7bae0de6b6a 537 Gene3D G3DSA:3.40.50.300 209 411 5.2E-53 T 14-10-2018 DB29_04078 ecb7ba57b620a7338201e7bae0de6b6a 537 SMART SM00490 253 334 7.7E-35 T 14-10-2018 IPR001650 Helicase, C-terminal DB29_04078 ecb7ba57b620a7338201e7bae0de6b6a 537 Gene3D G3DSA:3.30.70.330 447 522 4.6E-10 T 14-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily DB29_04078 ecb7ba57b620a7338201e7bae0de6b6a 537 Pfam PF03880 DbpA RNA binding domain 448 518 1.1E-17 T 14-10-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain DB29_04078 ecb7ba57b620a7338201e7bae0de6b6a 537 Gene3D G3DSA:3.40.50.300 1 206 4.9E-77 T 14-10-2018 DB29_04078 ecb7ba57b620a7338201e7bae0de6b6a 537 SUPERFAMILY SSF52540 70 356 6.07E-76 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_04078 ecb7ba57b620a7338201e7bae0de6b6a 537 Pfam PF00271 Helicase conserved C-terminal domain 226 334 1.5E-29 T 14-10-2018 IPR001650 Helicase, C-terminal DB29_04078 ecb7ba57b620a7338201e7bae0de6b6a 537 Pfam PF00270 DEAD/DEAH box helicase 27 190 4.6E-51 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 DB29_04078 ecb7ba57b620a7338201e7bae0de6b6a 537 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 148 156 - T 14-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site DB29_01904 05fb4193d8ba61c1873bc910793435b8 396 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 52 67 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site DB29_01904 05fb4193d8ba61c1873bc910793435b8 396 SUPERFAMILY SSF50465 304 396 5.76E-36 T 14-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal DB29_01904 05fb4193d8ba61c1873bc910793435b8 396 Pfam PF00009 Elongation factor Tu GTP binding domain 10 202 3.7E-60 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DB29_01904 05fb4193d8ba61c1873bc910793435b8 396 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 395 1.5E-231 T 14-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 DB29_01904 05fb4193d8ba61c1873bc910793435b8 396 Pfam PF03143 Elongation factor Tu C-terminal domain 300 394 2.3E-33 T 14-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal DB29_01904 05fb4193d8ba61c1873bc910793435b8 396 SUPERFAMILY SSF52540 6 220 3.66E-63 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_01904 05fb4193d8ba61c1873bc910793435b8 396 Gene3D G3DSA:2.40.30.10 340 394 3.6E-27 T 14-10-2018 DB29_01904 05fb4193d8ba61c1873bc910793435b8 396 Gene3D G3DSA:2.40.30.10 207 336 1.4E-53 T 14-10-2018 DB29_01904 05fb4193d8ba61c1873bc910793435b8 396 Gene3D G3DSA:3.40.50.300 1 204 1.5E-69 T 14-10-2018 DB29_01904 05fb4193d8ba61c1873bc910793435b8 396 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 12 147 3.2E-14 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 DB29_01904 05fb4193d8ba61c1873bc910793435b8 396 SUPERFAMILY SSF50447 204 303 1.51E-31 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily DB29_01904 05fb4193d8ba61c1873bc910793435b8 396 PRINTS PR00315 GTP-binding elongation factor signature 79 89 2.2E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DB29_01904 05fb4193d8ba61c1873bc910793435b8 396 PRINTS PR00315 GTP-binding elongation factor signature 132 141 2.2E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DB29_01904 05fb4193d8ba61c1873bc910793435b8 396 PRINTS PR00315 GTP-binding elongation factor signature 14 27 2.2E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DB29_01904 05fb4193d8ba61c1873bc910793435b8 396 PRINTS PR00315 GTP-binding elongation factor signature 59 67 2.2E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DB29_01904 05fb4193d8ba61c1873bc910793435b8 396 PRINTS PR00315 GTP-binding elongation factor signature 95 106 2.2E-24 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DB29_01904 05fb4193d8ba61c1873bc910793435b8 396 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 396 60.099 T 14-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 DB29_01904 05fb4193d8ba61c1873bc910793435b8 396 Pfam PF03144 Elongation factor Tu domain 2 226 295 1.2E-19 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 DB29_00502 9c46196c5ccf4294e539c3156f201acb 226 Pfam PF00486 Transcriptional regulatory protein, C terminal 153 223 1.8E-18 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DB29_00502 9c46196c5ccf4294e539c3156f201acb 226 SMART SM00448 4 113 1.4E-36 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DB29_00502 9c46196c5ccf4294e539c3156f201acb 226 SUPERFAMILY SSF52172 2 130 1.99E-33 T 14-10-2018 IPR011006 CheY-like superfamily DB29_00502 9c46196c5ccf4294e539c3156f201acb 226 Pfam PF00072 Response regulator receiver domain 6 113 5.8E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DB29_00502 9c46196c5ccf4294e539c3156f201acb 226 SUPERFAMILY SSF46894 125 223 7.09E-21 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DB29_00502 9c46196c5ccf4294e539c3156f201acb 226 Gene3D G3DSA:3.40.50.2300 1 121 1.5E-30 T 14-10-2018 DB29_00502 9c46196c5ccf4294e539c3156f201acb 226 Gene3D G3DSA:1.10.10.10 122 225 1.1E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_00502 9c46196c5ccf4294e539c3156f201acb 226 SMART SM00862 152 223 9.8E-16 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DB29_00722 711151f4ea763409b3dee286c95fb632 510 Gene3D G3DSA:3.20.20.70 46 223 2.3E-10 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DB29_00722 711151f4ea763409b3dee286c95fb632 510 Pfam PF02638 Glycosyl hydrolase-like 10 33 351 3.7E-102 T 14-10-2018 IPR003790 Glycosyl hydrolase-like 10 DB29_00722 711151f4ea763409b3dee286c95fb632 510 SUPERFAMILY SSF51445 61 318 9.97E-28 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily DB29_00722 711151f4ea763409b3dee286c95fb632 510 Gene3D G3DSA:2.60.40.10 414 510 3.5E-8 T 14-10-2018 IPR013783 Immunoglobulin-like fold DB29_03002 8e88580fd8b7d14c51cc958fb7320596 293 Pfam PF12833 Helix-turn-helix domain 206 283 2.3E-18 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DB29_03002 8e88580fd8b7d14c51cc958fb7320596 293 Gene3D G3DSA:1.10.10.60 234 289 1.6E-16 T 14-10-2018 DB29_03002 8e88580fd8b7d14c51cc958fb7320596 293 Pfam PF02311 AraC-like ligand binding domain 34 145 7.2E-11 T 14-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 DB29_03002 8e88580fd8b7d14c51cc958fb7320596 293 SUPERFAMILY SSF46689 236 286 2.33E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DB29_03002 8e88580fd8b7d14c51cc958fb7320596 293 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 267 283 8.5E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DB29_03002 8e88580fd8b7d14c51cc958fb7320596 293 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 252 267 8.5E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DB29_03002 8e88580fd8b7d14c51cc958fb7320596 293 Gene3D G3DSA:2.60.120.10 24 104 2.0E-7 T 14-10-2018 IPR014710 RmlC-like jelly roll fold DB29_03002 8e88580fd8b7d14c51cc958fb7320596 293 Gene3D G3DSA:1.10.10.60 184 233 2.9E-13 T 14-10-2018 DB29_03002 8e88580fd8b7d14c51cc958fb7320596 293 SMART SM00342 200 283 1.7E-24 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DB29_03002 8e88580fd8b7d14c51cc958fb7320596 293 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 237 279 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 DB29_03002 8e88580fd8b7d14c51cc958fb7320596 293 SUPERFAMILY SSF51215 26 166 6.67E-14 T 14-10-2018 IPR037923 Transcription regulator HTH-like DB29_03002 8e88580fd8b7d14c51cc958fb7320596 293 SUPERFAMILY SSF46689 184 234 3.4E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DB29_00326 12750293fa622c656ecac19f43d6325b 129 Gene3D G3DSA:1.10.3830.10 5 124 2.8E-40 T 14-10-2018 IPR036945 Diacylglycerol kinase (DAGK) superfamily GO:0008610|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 DB29_00326 12750293fa622c656ecac19f43d6325b 129 ProSitePatterns PS01069 Prokaryotic diacylglycerol kinase signature. 73 84 - T 14-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 DB29_00326 12750293fa622c656ecac19f43d6325b 129 Pfam PF01219 Prokaryotic diacylglycerol kinase 19 120 4.9E-35 T 14-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 DB29_03294 4180865a816ccfaa99ca161b9818f7ba 777 TIGRFAM TIGR02063 RNase_R: ribonuclease R 5 706 4.4E-276 T 14-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 DB29_03294 4180865a816ccfaa99ca161b9818f7ba 777 Hamap MF_01895 Ribonuclease R [rnr]. 24 706 59.639 T 14-10-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 DB29_03294 4180865a816ccfaa99ca161b9818f7ba 777 SUPERFAMILY SSF50249 54 133 5.78E-18 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DB29_03294 4180865a816ccfaa99ca161b9818f7ba 777 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 59 706 4.2E-235 T 14-10-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 DB29_03294 4180865a816ccfaa99ca161b9818f7ba 777 Pfam PF08206 Ribonuclease B OB domain 73 130 1.1E-20 T 14-10-2018 IPR013223 Ribonuclease B, N-terminal OB domain DB29_03294 4180865a816ccfaa99ca161b9818f7ba 777 SMART SM00316 624 706 3.6E-19 T 14-10-2018 IPR022967 RNA-binding domain, S1 DB29_03294 4180865a816ccfaa99ca161b9818f7ba 777 ProSitePatterns PS01175 Ribonuclease II family signature. 543 567 - T 14-10-2018 IPR022966 Ribonuclease II/R, conserved site DB29_03294 4180865a816ccfaa99ca161b9818f7ba 777 Pfam PF00773 RNB domain 246 574 1.0E-113 T 14-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 DB29_03294 4180865a816ccfaa99ca161b9818f7ba 777 SUPERFAMILY SSF50249 124 223 1.71E-15 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DB29_03294 4180865a816ccfaa99ca161b9818f7ba 777 Gene3D G3DSA:2.40.50.140 58 134 3.0E-17 T 14-10-2018 DB29_03294 4180865a816ccfaa99ca161b9818f7ba 777 SUPERFAMILY SSF50249 206 623 1.94E-146 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DB29_03294 4180865a816ccfaa99ca161b9818f7ba 777 SUPERFAMILY SSF50249 624 707 1.44E-23 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DB29_03294 4180865a816ccfaa99ca161b9818f7ba 777 SMART SM00357 72 131 2.2E-10 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 DB29_03294 4180865a816ccfaa99ca161b9818f7ba 777 SMART SM00955 246 576 3.6E-178 T 14-10-2018 IPR001900 Ribonuclease II/R GO:0003723|GO:0004540 DB29_03294 4180865a816ccfaa99ca161b9818f7ba 777 Pfam PF00575 S1 RNA binding domain 623 705 3.1E-16 T 14-10-2018 IPR003029 S1 domain GO:0003676 DB29_03294 4180865a816ccfaa99ca161b9818f7ba 777 Gene3D G3DSA:2.40.50.140 627 770 4.7E-27 T 14-10-2018 DB29_03333 2ef8676ef3708d0a3aba3fa5a237bfd7 272 SMART SM00342 184 267 3.0E-28 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DB29_03333 2ef8676ef3708d0a3aba3fa5a237bfd7 272 Pfam PF12833 Helix-turn-helix domain 190 264 2.0E-19 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DB29_03333 2ef8676ef3708d0a3aba3fa5a237bfd7 272 Gene3D G3DSA:1.10.10.60 165 217 1.0E-15 T 14-10-2018 DB29_03333 2ef8676ef3708d0a3aba3fa5a237bfd7 272 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 251 267 3.5E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DB29_03333 2ef8676ef3708d0a3aba3fa5a237bfd7 272 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 236 251 3.5E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DB29_03333 2ef8676ef3708d0a3aba3fa5a237bfd7 272 SUPERFAMILY SSF46689 167 217 5.55E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DB29_03333 2ef8676ef3708d0a3aba3fa5a237bfd7 272 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 221 263 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 DB29_03333 2ef8676ef3708d0a3aba3fa5a237bfd7 272 Gene3D G3DSA:1.10.10.60 218 270 2.0E-15 T 14-10-2018 DB29_03333 2ef8676ef3708d0a3aba3fa5a237bfd7 272 SUPERFAMILY SSF46689 220 265 5.82E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DB29_02335 fd53c3bd14af36f782b20c20b02e1018 181 ProDom PD102102 UPF0340 3D-STRUCTURE YWLG SMU.87 STU1894 BT9727_4999 TRANSFERASE TTE0860 SPY1898/M5005_SPY1614 TT1679 14 181 3.0E-82 T 14-10-2018 IPR006340 Protein of unknown function DUF436 DB29_02335 fd53c3bd14af36f782b20c20b02e1018 181 PIRSF PIRSF007510 2 180 1.8E-70 T 14-10-2018 IPR006340 Protein of unknown function DUF436 DB29_02335 fd53c3bd14af36f782b20c20b02e1018 181 SUPERFAMILY SSF110710 4 179 8.11E-73 T 14-10-2018 IPR028345 Aminoglycoside 3-N-acetyltransferase-like DB29_02335 fd53c3bd14af36f782b20c20b02e1018 181 Pfam PF04260 Protein of unknown function (DUF436) 11 177 3.2E-70 T 14-10-2018 IPR006340 Protein of unknown function DUF436 DB29_02335 fd53c3bd14af36f782b20c20b02e1018 181 TIGRFAM TIGR01440 TIGR01440: TIGR01440 family protein 10 177 1.7E-66 T 14-10-2018 IPR006340 Protein of unknown function DUF436 DB29_02335 fd53c3bd14af36f782b20c20b02e1018 181 Gene3D G3DSA:3.40.50.10360 2 181 3.3E-73 T 14-10-2018 IPR028345 Aminoglycoside 3-N-acetyltransferase-like DB29_02335 fd53c3bd14af36f782b20c20b02e1018 181 Hamap MF_00800 UPF0340 protein . 1 181 82.949 T 14-10-2018 IPR006340 Protein of unknown function DUF436 DB29_00018 45efbd90a1c2fd962f75e2e139309556 499 Pfam PF00209 Sodium:neurotransmitter symporter family 144 457 3.4E-69 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 DB29_00018 45efbd90a1c2fd962f75e2e139309556 499 Pfam PF00209 Sodium:neurotransmitter symporter family 3 121 4.0E-40 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 DB29_00018 45efbd90a1c2fd962f75e2e139309556 499 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 84 110 1.2E-26 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 DB29_00018 45efbd90a1c2fd962f75e2e139309556 499 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 310 329 1.2E-26 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 DB29_00018 45efbd90a1c2fd962f75e2e139309556 499 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 40 59 1.2E-26 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 DB29_00018 45efbd90a1c2fd962f75e2e139309556 499 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 387 407 1.2E-26 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 DB29_00018 45efbd90a1c2fd962f75e2e139309556 499 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 11 32 1.2E-26 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 DB29_00018 45efbd90a1c2fd962f75e2e139309556 499 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 428 448 1.2E-26 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 DB29_00018 45efbd90a1c2fd962f75e2e139309556 499 ProSitePatterns PS00610 Sodium:neurotransmitter symporter family signature 1. 27 41 - T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 DB29_00018 45efbd90a1c2fd962f75e2e139309556 499 SUPERFAMILY SSF161070 3 485 3.14E-143 T 14-10-2018 IPR037272 Sodium:neurotransmitter symporter superfamily GO:0005328 DB29_00417 6cde94599e16bfb8d720de5893ef442f 158 Gene3D G3DSA:3.10.50.30 79 158 8.7E-27 T 14-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 DB29_00417 6cde94599e16bfb8d720de5893ef442f 158 PIRSF PIRSF006092 1 158 1.2E-52 T 14-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 DB29_00417 6cde94599e16bfb8d720de5893ef442f 158 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 20 51 - T 14-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 DB29_00417 6cde94599e16bfb8d720de5893ef442f 158 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 123 139 - T 14-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 DB29_00417 6cde94599e16bfb8d720de5893ef442f 158 Hamap MF_00105 Transcription elongation factor GreA [greA]. 5 158 32.836 T 14-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 DB29_00417 6cde94599e16bfb8d720de5893ef442f 158 Gene3D G3DSA:1.10.287.180 5 78 3.3E-30 T 14-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 DB29_00417 6cde94599e16bfb8d720de5893ef442f 158 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 8 157 1.7E-59 T 14-10-2018 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 DB29_00417 6cde94599e16bfb8d720de5893ef442f 158 SUPERFAMILY SSF46557 5 80 1.57E-26 T 14-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 DB29_00417 6cde94599e16bfb8d720de5893ef442f 158 SUPERFAMILY SSF54534 83 157 2.49E-22 T 14-10-2018 DB29_00417 6cde94599e16bfb8d720de5893ef442f 158 Pfam PF03449 Transcription elongation factor, N-terminal 8 76 9.7E-31 T 14-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 DB29_00417 6cde94599e16bfb8d720de5893ef442f 158 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 86 158 6.1E-27 T 14-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 DB29_03665 907b269660660f833a9f876a6c48d485 295 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 8 285 2.0E-85 T 14-10-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 DB29_03665 907b269660660f833a9f876a6c48d485 295 Gene3D G3DSA:1.10.3720.10 57 290 1.9E-37 T 14-10-2018 IPR035906 MetI-like superfamily DB29_03665 907b269660660f833a9f876a6c48d485 295 SUPERFAMILY SSF161098 15 280 1.19E-41 T 14-10-2018 IPR035906 MetI-like superfamily DB29_03665 907b269660660f833a9f876a6c48d485 295 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 80 292 8.4E-44 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DB29_03979 777b08705c6c4448ffb4b07942b431f9 327 Gene3D G3DSA:3.40.50.300 107 307 5.5E-116 T 14-10-2018 DB29_03979 777b08705c6c4448ffb4b07942b431f9 327 SMART SM00962 118 319 7.4E-120 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 DB29_03979 777b08705c6c4448ffb4b07942b431f9 327 Pfam PF02881 SRP54-type protein, helical bundle domain 33 99 3.5E-15 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 DB29_03979 777b08705c6c4448ffb4b07942b431f9 327 SUPERFAMILY SSF47364 19 96 1.19E-21 T 14-10-2018 IPR036225 SRP/SRP receptor, N-terminal Reactome: R-HSA-1799339 DB29_03979 777b08705c6c4448ffb4b07942b431f9 327 SMART SM00382 117 295 2.0E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_03979 777b08705c6c4448ffb4b07942b431f9 327 Pfam PF00448 SRP54-type protein, GTPase domain 119 318 6.5E-80 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 DB29_03979 777b08705c6c4448ffb4b07942b431f9 327 Gene3D G3DSA:1.20.120.140 20 316 5.5E-116 T 14-10-2018 DB29_03979 777b08705c6c4448ffb4b07942b431f9 327 SUPERFAMILY SSF52540 119 318 9.1E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_03979 777b08705c6c4448ffb4b07942b431f9 327 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 46 319 63.238 T 14-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 DB29_03979 777b08705c6c4448ffb4b07942b431f9 327 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 46 318 2.0E-114 T 14-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 DB29_03979 777b08705c6c4448ffb4b07942b431f9 327 SMART SM00963 22 103 2.1E-25 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 DB29_03714 613c4e510eab27921745136b9bed2009 698 Pfam PF00571 CBS domain 241 295 8.7E-11 T 14-10-2018 IPR000644 CBS domain DB29_03714 613c4e510eab27921745136b9bed2009 698 Pfam PF00571 CBS domain 179 231 1.9E-11 T 14-10-2018 IPR000644 CBS domain DB29_03714 613c4e510eab27921745136b9bed2009 698 Gene3D G3DSA:3.30.460.10 302 452 3.8E-44 T 14-10-2018 DB29_03714 613c4e510eab27921745136b9bed2009 698 Pfam PF01743 Poly A polymerase head domain 333 458 1.0E-26 T 14-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 DB29_03714 613c4e510eab27921745136b9bed2009 698 Gene3D G3DSA:1.10.3090.10 454 696 5.6E-40 T 14-10-2018 DB29_03714 613c4e510eab27921745136b9bed2009 698 SMART SM00116 248 296 1.2E-5 T 14-10-2018 IPR000644 CBS domain DB29_03714 613c4e510eab27921745136b9bed2009 698 SMART SM00116 185 233 3.3E-7 T 14-10-2018 IPR000644 CBS domain DB29_03714 613c4e510eab27921745136b9bed2009 698 Gene3D G3DSA:3.10.580.10 164 234 2.9E-14 T 14-10-2018 DB29_03714 613c4e510eab27921745136b9bed2009 698 SUPERFAMILY SSF81891 457 696 3.14E-36 T 14-10-2018 DB29_03714 613c4e510eab27921745136b9bed2009 698 SUPERFAMILY SSF81301 308 454 5.15E-32 T 14-10-2018 DB29_03714 613c4e510eab27921745136b9bed2009 698 SUPERFAMILY SSF64182 16 226 8.02E-10 T 14-10-2018 IPR038763 DHH phosphoesterase superfamily DB29_03714 613c4e510eab27921745136b9bed2009 698 Gene3D G3DSA:3.10.580.10 235 297 9.4E-13 T 14-10-2018 DB29_03714 613c4e510eab27921745136b9bed2009 698 SUPERFAMILY SSF54631 177 296 1.23E-29 T 14-10-2018 DB29_01048 a346fe2a6828af8405ea951b4891bbd3 354 Pfam PF12704 MacB-like periplasmic core domain 16 182 3.8E-7 T 14-10-2018 IPR025857 MacB-like periplasmic core domain DB29_04336 eb8cb06ad1ddb88213bb6d79016b71b1 301 PIRSF PIRSF001365 1 295 4.6E-86 T 14-10-2018 IPR002220 DapA-like GO:0016829 DB29_04336 eb8cb06ad1ddb88213bb6d79016b71b1 301 SMART SM01130 2 291 1.1E-124 T 14-10-2018 IPR002220 DapA-like GO:0016829 DB29_04336 eb8cb06ad1ddb88213bb6d79016b71b1 301 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 135 165 - T 14-10-2018 IPR020625 Schiff base-forming aldolase, active site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 DB29_04336 eb8cb06ad1ddb88213bb6d79016b71b1 301 Gene3D G3DSA:3.20.20.70 1 290 1.3E-104 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DB29_04336 eb8cb06ad1ddb88213bb6d79016b71b1 301 SUPERFAMILY SSF51569 6 288 6.38E-95 T 14-10-2018 DB29_04336 eb8cb06ad1ddb88213bb6d79016b71b1 301 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 6 288 1.5E-102 T 14-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DB29_04336 eb8cb06ad1ddb88213bb6d79016b71b1 301 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 2 289 58.101 T 14-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DB29_04336 eb8cb06ad1ddb88213bb6d79016b71b1 301 Pfam PF00701 Dihydrodipicolinate synthetase family 3 288 4.6E-96 T 14-10-2018 IPR002220 DapA-like GO:0016829 DB29_04336 eb8cb06ad1ddb88213bb6d79016b71b1 301 PRINTS PR00146 Dihydrodipicolinate synthase signature 73 91 2.0E-33 T 14-10-2018 IPR002220 DapA-like GO:0016829 DB29_04336 eb8cb06ad1ddb88213bb6d79016b71b1 301 PRINTS PR00146 Dihydrodipicolinate synthase signature 105 121 2.0E-33 T 14-10-2018 IPR002220 DapA-like GO:0016829 DB29_04336 eb8cb06ad1ddb88213bb6d79016b71b1 301 PRINTS PR00146 Dihydrodipicolinate synthase signature 36 57 2.0E-33 T 14-10-2018 IPR002220 DapA-like GO:0016829 DB29_04336 eb8cb06ad1ddb88213bb6d79016b71b1 301 PRINTS PR00146 Dihydrodipicolinate synthase signature 130 147 2.0E-33 T 14-10-2018 IPR002220 DapA-like GO:0016829 DB29_00192 c8e089a8231f20735e6ad201627cd7e5 144 SUPERFAMILY SSF50891 13 135 2.78E-49 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily DB29_00192 c8e089a8231f20735e6ad201627cd7e5 144 Gene3D G3DSA:2.40.100.10 1 144 3.1E-60 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily DB29_00192 c8e089a8231f20735e6ad201627cd7e5 144 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 39 56 - T 14-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 DB29_00192 c8e089a8231f20735e6ad201627cd7e5 144 PIRSF PIRSF001467 3 143 3.6E-43 T 14-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 DB29_00192 c8e089a8231f20735e6ad201627cd7e5 144 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 9 135 1.1E-42 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 DB29_00192 c8e089a8231f20735e6ad201627cd7e5 144 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 112 127 3.5E-28 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 DB29_00192 c8e089a8231f20735e6ad201627cd7e5 144 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 99 111 3.5E-28 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 DB29_00192 c8e089a8231f20735e6ad201627cd7e5 144 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 18 33 3.5E-28 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 DB29_00192 c8e089a8231f20735e6ad201627cd7e5 144 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 44 56 3.5E-28 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 DB29_00192 c8e089a8231f20735e6ad201627cd7e5 144 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 84 99 3.5E-28 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 DB29_02832 fa5752dfa41d150ddd18fe19ffc72f47 272 SUPERFAMILY SSF161098 5 271 2.34E-77 T 14-10-2018 IPR035906 MetI-like superfamily DB29_02832 fa5752dfa41d150ddd18fe19ffc72f47 272 Gene3D G3DSA:1.10.3720.10 3 263 1.2E-71 T 14-10-2018 IPR035906 MetI-like superfamily DB29_02832 fa5752dfa41d150ddd18fe19ffc72f47 272 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 88 262 1.3E-21 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DB29_01913 9c856069aa200c2ff89d56d0bf596a17 166 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 3 161 29.182 T 14-10-2018 IPR022973 Ribosomal protein L10 DB29_01913 9c856069aa200c2ff89d56d0bf596a17 166 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 26 143 0.002 T 14-10-2018 DB29_01913 9c856069aa200c2ff89d56d0bf596a17 166 SUPERFAMILY SSF160369 4 160 1.18E-54 T 14-10-2018 DB29_01913 9c856069aa200c2ff89d56d0bf596a17 166 ProSitePatterns PS01109 Ribosomal protein L10 signature. 8 42 - T 14-10-2018 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 DB29_01913 9c856069aa200c2ff89d56d0bf596a17 166 Gene3D G3DSA:3.30.70.1730 5 133 8.6E-45 T 14-10-2018 DB29_01913 9c856069aa200c2ff89d56d0bf596a17 166 Pfam PF00466 Ribosomal protein L10 5 101 4.6E-30 T 14-10-2018 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 DB29_00855 6d9cecdbd9838ba3b34697b0af0b33e9 553 Pfam PF13416 Bacterial extracellular solute-binding protein 62 371 2.4E-22 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein DB29_00855 6d9cecdbd9838ba3b34697b0af0b33e9 553 Gene3D G3DSA:3.40.190.10 156 542 3.1E-60 T 14-10-2018 DB29_00855 6d9cecdbd9838ba3b34697b0af0b33e9 553 Gene3D G3DSA:3.40.190.10 61 434 3.1E-60 T 14-10-2018 DB29_00855 6d9cecdbd9838ba3b34697b0af0b33e9 553 SUPERFAMILY SSF53850 24 544 1.9E-82 T 14-10-2018 DB29_01476 763159b23b2de9eabf592f0b01fb5aec 302 SUPERFAMILY SSF51215 38 173 9.94E-22 T 14-10-2018 IPR037923 Transcription regulator HTH-like DB29_01476 763159b23b2de9eabf592f0b01fb5aec 302 Pfam PF12833 Helix-turn-helix domain 218 296 4.4E-21 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DB29_01476 763159b23b2de9eabf592f0b01fb5aec 302 SUPERFAMILY SSF46689 250 298 2.91E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DB29_01476 763159b23b2de9eabf592f0b01fb5aec 302 Pfam PF02311 AraC-like ligand binding domain 47 111 1.4E-12 T 14-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 DB29_01476 763159b23b2de9eabf592f0b01fb5aec 302 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 249 291 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 DB29_01476 763159b23b2de9eabf592f0b01fb5aec 302 SMART SM00342 212 295 3.2E-21 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DB29_01476 763159b23b2de9eabf592f0b01fb5aec 302 Gene3D G3DSA:1.10.10.60 191 301 4.5E-26 T 14-10-2018 DB29_01476 763159b23b2de9eabf592f0b01fb5aec 302 Gene3D G3DSA:2.60.120.10 3 132 2.6E-16 T 14-10-2018 IPR014710 RmlC-like jelly roll fold DB29_01476 763159b23b2de9eabf592f0b01fb5aec 302 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 264 279 2.5E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DB29_01476 763159b23b2de9eabf592f0b01fb5aec 302 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 279 295 2.5E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DB29_02722 5ad090c5d723f2b31442c7b19be77035 278 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 5.4E-19 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_02722 5ad090c5d723f2b31442c7b19be77035 278 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 5.4E-19 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_02722 5ad090c5d723f2b31442c7b19be77035 278 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 5.4E-19 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_02722 5ad090c5d723f2b31442c7b19be77035 278 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 188 205 5.4E-19 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_02722 5ad090c5d723f2b31442c7b19be77035 278 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 186 5.4E-19 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_02722 5ad090c5d723f2b31442c7b19be77035 278 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 1.0E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_02722 5ad090c5d723f2b31442c7b19be77035 278 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 1.0E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_02722 5ad090c5d723f2b31442c7b19be77035 278 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 167 186 1.0E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_02722 5ad090c5d723f2b31442c7b19be77035 278 Gene3D G3DSA:3.40.50.720 2 275 3.1E-44 T 14-10-2018 DB29_02722 5ad090c5d723f2b31442c7b19be77035 278 Pfam PF00106 short chain dehydrogenase 6 140 8.2E-20 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_02722 5ad090c5d723f2b31442c7b19be77035 278 SUPERFAMILY SSF51735 4 253 4.26E-39 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_02722 5ad090c5d723f2b31442c7b19be77035 278 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 154 182 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 DB29_03284 373df872c1ddeb1487a776e87f526d13 486 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 280 291 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 DB29_03284 373df872c1ddeb1487a776e87f526d13 486 Pfam PF00171 Aldehyde dehydrogenase family 18 482 2.0E-167 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 DB29_03284 373df872c1ddeb1487a776e87f526d13 486 Gene3D G3DSA:3.40.605.10 26 481 3.2E-164 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 DB29_03284 373df872c1ddeb1487a776e87f526d13 486 Gene3D G3DSA:3.40.309.10 256 454 3.2E-164 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 DB29_03284 373df872c1ddeb1487a776e87f526d13 486 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 252 259 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 DB29_03284 373df872c1ddeb1487a776e87f526d13 486 SUPERFAMILY SSF53720 7 484 2.09E-157 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 DB29_04358 79f5eaa55286b38a2b224e516d25610e 125 Gene3D G3DSA:2.30.30.40 1 66 2.1E-7 T 14-10-2018 DB29_04358 79f5eaa55286b38a2b224e516d25610e 125 SUPERFAMILY SSF50044 3 61 2.23E-8 T 14-10-2018 IPR036028 SH3-like domain superfamily GO:0005515 DB29_04358 79f5eaa55286b38a2b224e516d25610e 125 SMART SM00326 64 116 0.018 T 14-10-2018 IPR001452 SH3 domain GO:0005515 DB29_04358 79f5eaa55286b38a2b224e516d25610e 125 SMART SM00326 2 61 1.3 T 14-10-2018 IPR001452 SH3 domain GO:0005515 DB29_04358 79f5eaa55286b38a2b224e516d25610e 125 Gene3D G3DSA:2.30.30.40 67 115 1.5E-6 T 14-10-2018 DB29_04358 79f5eaa55286b38a2b224e516d25610e 125 Pfam PF00018 SH3 domain 74 109 4.1E-5 T 14-10-2018 IPR001452 SH3 domain GO:0005515 DB29_04358 79f5eaa55286b38a2b224e516d25610e 125 Pfam PF07653 Variant SH3 domain 4 57 7.7E-6 T 14-10-2018 IPR001452 SH3 domain GO:0005515 DB29_04358 79f5eaa55286b38a2b224e516d25610e 125 PIRSF PIRSF034961 2 116 7.4E-35 T 14-10-2018 IPR014593 Uncharacterised conserved protein UCP034961, SH3-2 DB29_04358 79f5eaa55286b38a2b224e516d25610e 125 SUPERFAMILY SSF50044 68 110 1.84E-8 T 14-10-2018 IPR036028 SH3-like domain superfamily GO:0005515 DB29_02523 46d3bb8dd511e2a67ac30e28948ed9b5 282 Gene3D G3DSA:3.90.25.10 161 274 1.0E-111 T 14-10-2018 DB29_02523 46d3bb8dd511e2a67ac30e28948ed9b5 282 Gene3D G3DSA:3.40.50.720 5 268 1.0E-111 T 14-10-2018 DB29_02523 46d3bb8dd511e2a67ac30e28948ed9b5 282 SUPERFAMILY SSF51735 4 281 5.04E-97 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_02523 46d3bb8dd511e2a67ac30e28948ed9b5 282 Pfam PF04321 RmlD substrate binding domain 4 281 3.9E-105 T 14-10-2018 IPR029903 RmlD-like substrate binding domain Reactome: R-HSA-156581|Reactome: R-HSA-5689880 DB29_02523 46d3bb8dd511e2a67ac30e28948ed9b5 282 TIGRFAM TIGR01214 rmlD: dTDP-4-dehydrorhamnose reductase 4 280 1.1E-106 T 14-10-2018 IPR005913 dTDP-4-dehydrorhamnose reductase family Reactome: R-HSA-156581|Reactome: R-HSA-5689880 DB29_03084 5118e20c13058fc64ef26cac7e03a21d 150 SUPERFAMILY SSF55804 2 144 1.44E-34 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 DB29_03084 5118e20c13058fc64ef26cac7e03a21d 150 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 2 144 1.6E-34 T 14-10-2018 IPR002178 PTS EIIA type-2 domain DB29_03084 5118e20c13058fc64ef26cac7e03a21d 150 TIGRFAM TIGR00848 fruA: PTS system, fructose subfamily, IIA component 2 128 4.5E-35 T 14-10-2018 IPR004715 Phosphotransferase system, IIA component fructose subfamily GO:0008982|GO:0009401|GO:0016021 DB29_03084 5118e20c13058fc64ef26cac7e03a21d 150 Gene3D G3DSA:3.40.930.10 1 148 1.1E-39 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 DB29_02176 cf06c86b441e7b71f205c9af8b0cd799 472 SMART SM00304 188 241 1.2E-11 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DB29_02176 cf06c86b441e7b71f205c9af8b0cd799 472 SMART SM00387 350 462 2.2E-31 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DB29_02176 cf06c86b441e7b71f205c9af8b0cd799 472 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 351 459 4.2E-22 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DB29_02176 cf06c86b441e7b71f205c9af8b0cd799 472 Gene3D G3DSA:3.30.565.10 310 462 5.3E-42 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB29_02176 cf06c86b441e7b71f205c9af8b0cd799 472 PRINTS PR00344 Bacterial sensor protein C-terminal signature 422 440 4.0E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB29_02176 cf06c86b441e7b71f205c9af8b0cd799 472 PRINTS PR00344 Bacterial sensor protein C-terminal signature 387 401 4.0E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB29_02176 cf06c86b441e7b71f205c9af8b0cd799 472 PRINTS PR00344 Bacterial sensor protein C-terminal signature 446 459 4.0E-12 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB29_02176 cf06c86b441e7b71f205c9af8b0cd799 472 SUPERFAMILY SSF55874 294 459 5.24E-44 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB29_02176 cf06c86b441e7b71f205c9af8b0cd799 472 SMART SM00388 242 305 9.2E-16 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DB29_02176 cf06c86b441e7b71f205c9af8b0cd799 472 SUPERFAMILY SSF158472 189 238 8.89E-9 T 14-10-2018 DB29_02176 cf06c86b441e7b71f205c9af8b0cd799 472 Pfam PF00672 HAMP domain 189 237 1.0E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DB29_02176 cf06c86b441e7b71f205c9af8b0cd799 472 SUPERFAMILY SSF47384 225 304 1.28E-18 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DB29_02176 cf06c86b441e7b71f205c9af8b0cd799 472 Pfam PF00512 His Kinase A (phospho-acceptor) domain 243 304 1.4E-16 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DB29_02176 cf06c86b441e7b71f205c9af8b0cd799 472 Gene3D G3DSA:1.10.287.130 186 301 2.0E-31 T 14-10-2018 DB29_03563 f4a2134f684e00921f150743e1402836 119 PRINTS PR00062 Ribosomal protein L20 signature 12 41 4.3E-41 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB29_03563 f4a2134f684e00921f150743e1402836 119 PRINTS PR00062 Ribosomal protein L20 signature 75 101 4.3E-41 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB29_03563 f4a2134f684e00921f150743e1402836 119 PRINTS PR00062 Ribosomal protein L20 signature 42 71 4.3E-41 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB29_03563 f4a2134f684e00921f150743e1402836 119 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 23 70 1.0E-13 T 14-10-2018 DB29_03563 f4a2134f684e00921f150743e1402836 119 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 2.2E-50 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB29_03563 f4a2134f684e00921f150743e1402836 119 Gene3D G3DSA:1.10.1900.20 56 119 1.5E-29 T 14-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB29_03563 f4a2134f684e00921f150743e1402836 119 Gene3D G3DSA:1.10.720.90 2 55 2.0E-25 T 14-10-2018 DB29_03563 f4a2134f684e00921f150743e1402836 119 Pfam PF00453 Ribosomal protein L20 3 109 1.9E-49 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB29_03563 f4a2134f684e00921f150743e1402836 119 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB29_03563 f4a2134f684e00921f150743e1402836 119 SUPERFAMILY SSF74731 2 116 2.62E-50 T 14-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB29_03563 f4a2134f684e00921f150743e1402836 119 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 30.572 T 14-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB29_00406 0dfa7cf0f082f557aba499987d05af5f 304 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 302 2.1E-40 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DB29_00406 0dfa7cf0f082f557aba499987d05af5f 304 Gene3D G3DSA:1.10.3720.10 82 298 4.0E-27 T 14-10-2018 IPR035906 MetI-like superfamily DB29_00406 0dfa7cf0f082f557aba499987d05af5f 304 SUPERFAMILY SSF161098 89 290 1.8E-22 T 14-10-2018 IPR035906 MetI-like superfamily DB29_00796 5cd1e709a490432788b355e62120685f 156 Pfam PF14567 SMI1-KNR4 cell-wall 3 152 4.0E-33 T 14-10-2018 DB29_00796 5cd1e709a490432788b355e62120685f 156 SUPERFAMILY SSF160631 1 154 9.68E-39 T 14-10-2018 DB29_00796 5cd1e709a490432788b355e62120685f 156 Gene3D G3DSA:3.40.1580.10 2 156 7.0E-42 T 14-10-2018 IPR037883 Knr4/Smi1-like domain superfamily DB29_00796 5cd1e709a490432788b355e62120685f 156 SMART SM00860 25 150 0.0015 T 14-10-2018 IPR018958 Knr4/Smi1-like domain DB29_02755 776a8653a065175e14cc7baa65ede9e2 133 Pfam PF10685 Stress-induced bacterial acidophilic repeat motif 72 89 3.0E-6 T 14-10-2018 IPR019626 Stress-induced protein, KGG, repeat DB29_02755 776a8653a065175e14cc7baa65ede9e2 133 Pfam PF10685 Stress-induced bacterial acidophilic repeat motif 32 49 3.0E-6 T 14-10-2018 IPR019626 Stress-induced protein, KGG, repeat DB29_02755 776a8653a065175e14cc7baa65ede9e2 133 Pfam PF10685 Stress-induced bacterial acidophilic repeat motif 52 69 3.1E-6 T 14-10-2018 IPR019626 Stress-induced protein, KGG, repeat DB29_02755 776a8653a065175e14cc7baa65ede9e2 133 Pfam PF10685 Stress-induced bacterial acidophilic repeat motif 112 127 9.2E-6 T 14-10-2018 IPR019626 Stress-induced protein, KGG, repeat DB29_02755 776a8653a065175e14cc7baa65ede9e2 133 Pfam PF10685 Stress-induced bacterial acidophilic repeat motif 92 107 6.1E-6 T 14-10-2018 IPR019626 Stress-induced protein, KGG, repeat DB29_03907 81283df4ce4a5df731db9ed5b3b5574b 143 Hamap MF_01008 Transcriptional regulator MraZ [mraZ]. 1 143 60.149 T 14-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 DB29_03907 81283df4ce4a5df731db9ed5b3b5574b 143 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 1 138 2.0E-78 T 14-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 DB29_03907 81283df4ce4a5df731db9ed5b3b5574b 143 SUPERFAMILY SSF89447 1 136 1.05E-53 T 14-10-2018 IPR037914 SpoVT-AbrB domain superfamily DB29_03907 81283df4ce4a5df731db9ed5b3b5574b 143 Pfam PF02381 MraZ protein, putative antitoxin-like 72 141 2.9E-27 T 14-10-2018 IPR020603 MraZ domain DB29_03907 81283df4ce4a5df731db9ed5b3b5574b 143 Pfam PF02381 MraZ protein, putative antitoxin-like 1 70 1.6E-24 T 14-10-2018 IPR020603 MraZ domain DB29_03907 81283df4ce4a5df731db9ed5b3b5574b 143 TIGRFAM TIGR00242 TIGR00242: division/cell wall cluster transcriptional repressor MraZ 1 143 5.4E-60 T 14-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 DB29_03907 81283df4ce4a5df731db9ed5b3b5574b 143 Gene3D G3DSA:2.40.330.20 1 142 6.9E-56 T 14-10-2018 IPR038619 MraZ superfamily DB29_03140 05c85003e751d31f2b69e3a9d6a5844b 317 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 11 126 5.0E-47 T 14-10-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 DB29_03140 05c85003e751d31f2b69e3a9d6a5844b 317 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 11 317 1.3E-113 T 14-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 DB29_03140 05c85003e751d31f2b69e3a9d6a5844b 317 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 134 149 - T 14-10-2018 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 DB29_03140 05c85003e751d31f2b69e3a9d6a5844b 317 SMART SM01400 10 126 7.3E-74 T 14-10-2018 DB29_03140 05c85003e751d31f2b69e3a9d6a5844b 317 Pfam PF14572 Phosphoribosyl synthetase-associated domain 209 316 4.9E-24 T 14-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 DB29_03140 05c85003e751d31f2b69e3a9d6a5844b 317 Gene3D G3DSA:3.40.50.2020 13 305 7.2E-115 T 14-10-2018 DB29_03140 05c85003e751d31f2b69e3a9d6a5844b 317 Hamap MF_00583_B Putative ribose-phosphate pyrophosphokinase [prs]. 10 317 46.101 T 14-10-2018 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type GO:0004749 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 DB29_03140 05c85003e751d31f2b69e3a9d6a5844b 317 Gene3D G3DSA:3.40.50.2020 153 293 7.2E-115 T 14-10-2018 DB29_03140 05c85003e751d31f2b69e3a9d6a5844b 317 SUPERFAMILY SSF53271 75 308 1.63E-59 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like DB29_03500 ef8f2fb1961ba829ef5909653c4d6e37 400 Hamap MF_00021 tRNA sulfurtransferase [thiI]. 1 400 146.203 T 14-10-2018 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 KEGG: 00730+2.8.1.4 DB29_03500 ef8f2fb1961ba829ef5909653c4d6e37 400 Pfam PF02926 THUMP domain 42 162 1.6E-15 T 14-10-2018 IPR004114 THUMP domain GO:0003723 DB29_03500 ef8f2fb1961ba829ef5909653c4d6e37 400 Pfam PF02568 Thiamine biosynthesis protein (ThiI) 175 367 2.9E-62 T 14-10-2018 IPR020536 Thil, AANH domain GO:0004810 KEGG: 00730+2.8.1.4 DB29_03500 ef8f2fb1961ba829ef5909653c4d6e37 400 SMART SM00981 74 165 5.4E-18 T 14-10-2018 IPR004114 THUMP domain GO:0003723 DB29_03500 ef8f2fb1961ba829ef5909653c4d6e37 400 SUPERFAMILY SSF52402 174 382 1.1E-49 T 14-10-2018 DB29_03500 ef8f2fb1961ba829ef5909653c4d6e37 400 Gene3D G3DSA:3.30.2130.30 1 174 5.0E-56 T 14-10-2018 DB29_03500 ef8f2fb1961ba829ef5909653c4d6e37 400 TIGRFAM TIGR00342 TIGR00342: tRNA sulfurtransferase ThiI 6 374 3.3E-115 T 14-10-2018 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 KEGG: 00730+2.8.1.4 DB29_03500 ef8f2fb1961ba829ef5909653c4d6e37 400 SUPERFAMILY SSF143437 3 173 4.01E-46 T 14-10-2018 DB29_03500 ef8f2fb1961ba829ef5909653c4d6e37 400 Gene3D G3DSA:3.40.50.620 175 398 5.7E-70 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DB29_02141 a61bbbb2c7fdd86e031226f588f7f546 255 Pfam PF07729 FCD domain 116 241 2.6E-25 T 14-10-2018 IPR011711 GntR, C-terminal DB29_02141 a61bbbb2c7fdd86e031226f588f7f546 255 SMART SM00345 33 92 1.7E-23 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DB29_02141 a61bbbb2c7fdd86e031226f588f7f546 255 SUPERFAMILY SSF46785 25 96 7.91E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_02141 a61bbbb2c7fdd86e031226f588f7f546 255 Gene3D G3DSA:1.20.120.530 110 251 1.5E-28 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DB29_02141 a61bbbb2c7fdd86e031226f588f7f546 255 SUPERFAMILY SSF48008 113 247 1.8E-26 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DB29_02141 a61bbbb2c7fdd86e031226f588f7f546 255 Gene3D G3DSA:1.10.10.10 23 99 1.1E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_02141 a61bbbb2c7fdd86e031226f588f7f546 255 SMART SM00895 116 242 4.3E-22 T 14-10-2018 IPR011711 GntR, C-terminal DB29_02141 a61bbbb2c7fdd86e031226f588f7f546 255 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 52 66 2.0E-11 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DB29_02141 a61bbbb2c7fdd86e031226f588f7f546 255 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 66 82 2.0E-11 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DB29_02141 a61bbbb2c7fdd86e031226f588f7f546 255 Pfam PF00392 Bacterial regulatory proteins, gntR family 30 92 8.0E-22 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DB29_01299 80e02ce5df09f80de8ab01728099b420 268 SUPERFAMILY SSF46689 3 77 8.42E-19 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DB29_01299 80e02ce5df09f80de8ab01728099b420 268 Gene3D G3DSA:1.10.10.10 3 77 4.5E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_01299 80e02ce5df09f80de8ab01728099b420 268 Pfam PF01380 SIS domain 114 222 1.3E-21 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 DB29_01299 80e02ce5df09f80de8ab01728099b420 268 SUPERFAMILY SSF53697 87 258 3.08E-36 T 14-10-2018 DB29_01299 80e02ce5df09f80de8ab01728099b420 268 Gene3D G3DSA:3.40.50.10490 88 263 4.5E-38 T 14-10-2018 DB29_01299 80e02ce5df09f80de8ab01728099b420 268 Pfam PF01418 Helix-turn-helix domain, rpiR family 4 76 9.0E-19 T 14-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 DB29_03864 613643ad99e0421436038c20af812f1e 450 Pfam PF01435 Peptidase family M48 159 241 2.5E-7 T 14-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 DB29_03864 613643ad99e0421436038c20af812f1e 450 Gene3D G3DSA:1.25.40.20 320 446 3.3E-25 T 14-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily DB29_03864 613643ad99e0421436038c20af812f1e 450 Pfam PF12796 Ankyrin repeats (3 copies) 331 421 2.0E-9 T 14-10-2018 IPR020683 Ankyrin repeat-containing domain DB29_03864 613643ad99e0421436038c20af812f1e 450 SUPERFAMILY SSF48403 325 445 1.35E-22 T 14-10-2018 IPR036770 Ankyrin repeat-containing domain superfamily DB29_03864 613643ad99e0421436038c20af812f1e 450 SMART SM00248 360 389 7.4E-4 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 DB29_03864 613643ad99e0421436038c20af812f1e 450 SMART SM00248 326 356 38.0 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 DB29_03864 613643ad99e0421436038c20af812f1e 450 SMART SM00248 392 421 0.073 T 14-10-2018 IPR002110 Ankyrin repeat GO:0005515 DB29_03864 613643ad99e0421436038c20af812f1e 450 Pfam PF01435 Peptidase family M48 67 154 1.4E-10 T 14-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 DB29_03864 613643ad99e0421436038c20af812f1e 450 Gene3D G3DSA:3.30.2010.10 62 154 6.9E-9 T 14-10-2018 DB29_01109 43328847e3d85008ccac31ec9e51336b 166 Pfam PF01967 MoaC family 15 152 1.4E-51 T 14-10-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 DB29_01109 43328847e3d85008ccac31ec9e51336b 166 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 4 154 1.8E-54 T 14-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 DB29_01109 43328847e3d85008ccac31ec9e51336b 166 SUPERFAMILY SSF55040 12 157 1.57E-53 T 14-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 DB29_01109 43328847e3d85008ccac31ec9e51336b 166 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase [moaC]. 2 160 32.689 T 14-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 DB29_01109 43328847e3d85008ccac31ec9e51336b 166 Gene3D G3DSA:3.30.70.640 1 161 2.1E-62 T 14-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 DB29_03677 7d5aba755ae0e9eb12edb6be13e376b4 2343 ProDom PD039135 WALL-ASSOCIATED REPEAT PROTEIN CELL WALL HYDROLASE PRECURSOR SIGNAL TRANSMEMBRANE RETICULOCYTE 102 296 1.0E-47 T 14-10-2018 DB29_03677 7d5aba755ae0e9eb12edb6be13e376b4 2343 Gene3D G3DSA:2.60.120.260 1314 1477 6.4E-26 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily DB29_03677 7d5aba755ae0e9eb12edb6be13e376b4 2343 Gene3D G3DSA:2.60.120.260 1478 1631 2.4E-15 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily DB29_03677 7d5aba755ae0e9eb12edb6be13e376b4 2343 SUPERFAMILY SSF49785 1314 1469 5.1E-6 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily DB29_03677 7d5aba755ae0e9eb12edb6be13e376b4 2343 Pfam PF05593 RHS Repeat 2101 2130 3.9E-5 T 14-10-2018 IPR031325 RHS repeat DB29_03677 7d5aba755ae0e9eb12edb6be13e376b4 2343 Pfam PF05593 RHS Repeat 1917 1953 1.6E-6 T 14-10-2018 IPR031325 RHS repeat DB29_03677 7d5aba755ae0e9eb12edb6be13e376b4 2343 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 2123 2206 5.3E-21 T 14-10-2018 IPR022385 Rhs repeat-associated core GO:0097264 DB29_03677 7d5aba755ae0e9eb12edb6be13e376b4 2343 Gene3D G3DSA:2.180.10.10 1945 2205 1.7E-31 T 14-10-2018 DB29_03677 7d5aba755ae0e9eb12edb6be13e376b4 2343 Gene3D G3DSA:3.90.930.1 1663 1779 9.2E-7 T 14-10-2018 DB29_03677 7d5aba755ae0e9eb12edb6be13e376b4 2343 SMART SM00060 780 896 18.0 T 14-10-2018 IPR003961 Fibronectin type III GO:0005515 DB29_03677 7d5aba755ae0e9eb12edb6be13e376b4 2343 SMART SM00060 517 632 0.37 T 14-10-2018 IPR003961 Fibronectin type III GO:0005515 DB29_03677 7d5aba755ae0e9eb12edb6be13e376b4 2343 SMART SM00060 648 764 130.0 T 14-10-2018 IPR003961 Fibronectin type III GO:0005515 DB29_03677 7d5aba755ae0e9eb12edb6be13e376b4 2343 Gene3D G3DSA:3.90.930.1 1015 1141 3.3E-6 T 14-10-2018 DB29_03677 7d5aba755ae0e9eb12edb6be13e376b4 2343 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 1741 1770 9.9E-5 T 14-10-2018 IPR006530 YD repeat DB29_03677 7d5aba755ae0e9eb12edb6be13e376b4 2343 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 1100 1127 7.7E-5 T 14-10-2018 IPR006530 YD repeat DB29_03677 7d5aba755ae0e9eb12edb6be13e376b4 2343 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 1938 1976 8.7E-8 T 14-10-2018 IPR006530 YD repeat DB29_03912 c90df516ec71ee8caaddf1818df57630 487 Pfam PF01225 Mur ligase family, catalytic domain 24 96 4.3E-15 T 14-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 DB29_03912 c90df516ec71ee8caaddf1818df57630 487 Pfam PF08245 Mur ligase middle domain 108 310 1.4E-58 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 DB29_03912 c90df516ec71ee8caaddf1818df57630 487 SUPERFAMILY SSF63418 3 99 5.36E-27 T 14-10-2018 IPR035911 MurE/MurF, N-terminal DB29_03912 c90df516ec71ee8caaddf1818df57630 487 Gene3D G3DSA:3.90.190.20 337 487 5.8E-63 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 DB29_03912 c90df516ec71ee8caaddf1818df57630 487 Gene3D G3DSA:3.40.1190.10 99 335 5.8E-89 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 DB29_03912 c90df516ec71ee8caaddf1818df57630 487 SUPERFAMILY SSF53244 331 485 5.1E-51 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 DB29_03912 c90df516ec71ee8caaddf1818df57630 487 SUPERFAMILY SSF53623 99 330 2.22E-74 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 DB29_03912 c90df516ec71ee8caaddf1818df57630 487 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 23 482 2.5E-171 T 14-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 DB29_03912 c90df516ec71ee8caaddf1818df57630 487 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 1 482 36.789 T 14-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 DB29_03912 c90df516ec71ee8caaddf1818df57630 487 Pfam PF02875 Mur ligase family, glutamate ligase domain 331 416 2.4E-25 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 DB29_03912 c90df516ec71ee8caaddf1818df57630 487 Gene3D G3DSA:3.40.1390.10 2 98 2.0E-29 T 14-10-2018 DB29_03705 a8f1d361ce26ecddbfda05641997f6b1 279 Gene3D G3DSA:3.40.50.720 2 259 9.7E-28 T 14-10-2018 DB29_03705 a8f1d361ce26ecddbfda05641997f6b1 279 SUPERFAMILY SSF51735 2 247 2.63E-28 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_03705 a8f1d361ce26ecddbfda05641997f6b1 279 Pfam PF01370 NAD dependent epimerase/dehydratase family 6 201 2.0E-10 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 DB29_02668 b6787d316d0052b0ed740733b0e4a17c 244 Gene3D G3DSA:3.40.50.2300 1 141 2.6E-33 T 14-10-2018 DB29_02668 b6787d316d0052b0ed740733b0e4a17c 244 SUPERFAMILY SSF52172 1 123 2.13E-34 T 14-10-2018 IPR011006 CheY-like superfamily DB29_02668 b6787d316d0052b0ed740733b0e4a17c 244 Gene3D G3DSA:1.10.10.60 142 189 2.4E-18 T 14-10-2018 DB29_02668 b6787d316d0052b0ed740733b0e4a17c 244 SMART SM00342 156 238 1.1E-27 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DB29_02668 b6787d316d0052b0ed740733b0e4a17c 244 SUPERFAMILY SSF46689 192 240 5.38E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DB29_02668 b6787d316d0052b0ed740733b0e4a17c 244 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 222 238 2.1E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DB29_02668 b6787d316d0052b0ed740733b0e4a17c 244 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 207 222 2.1E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DB29_02668 b6787d316d0052b0ed740733b0e4a17c 244 SUPERFAMILY SSF46689 139 190 3.91E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DB29_02668 b6787d316d0052b0ed740733b0e4a17c 244 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 193 234 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 DB29_02668 b6787d316d0052b0ed740733b0e4a17c 244 Pfam PF00072 Response regulator receiver domain 4 116 3.5E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DB29_02668 b6787d316d0052b0ed740733b0e4a17c 244 Pfam PF12833 Helix-turn-helix domain 162 238 2.1E-18 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DB29_02668 b6787d316d0052b0ed740733b0e4a17c 244 Gene3D G3DSA:1.10.10.60 190 241 2.4E-14 T 14-10-2018 DB29_02668 b6787d316d0052b0ed740733b0e4a17c 244 SMART SM00448 2 116 2.2E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DB29_00389 a75065935035e515403f6a35f08b5001 457 Gene3D G3DSA:3.30.950.10 121 262 2.4E-45 T 14-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 DB29_00389 a75065935035e515403f6a35f08b5001 457 PIRSF PIRSF036426 367 449 150.0 T 14-10-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 DB29_00389 a75065935035e515403f6a35f08b5001 457 PIRSF PIRSF036426 1 256 3.1E-94 T 14-10-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 DB29_00389 a75065935035e515403f6a35f08b5001 457 Gene3D G3DSA:3.40.1010.10 3 120 2.2E-41 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 DB29_00389 a75065935035e515403f6a35f08b5001 457 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 10 24 - T 14-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 DB29_00389 a75065935035e515403f6a35f08b5001 457 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 85 118 - T 14-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 DB29_00389 a75065935035e515403f6a35f08b5001 457 SUPERFAMILY SSF53790 4 255 1.96E-73 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 DB29_00389 a75065935035e515403f6a35f08b5001 457 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 6 218 3.0E-45 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 DB29_00389 a75065935035e515403f6a35f08b5001 457 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 5 241 3.0E-89 T 14-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 DB29_03093 a5dc6684e11d030505f354210ebf4874 328 SUPERFAMILY SSF53901 184 327 1.68E-23 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 DB29_03093 a5dc6684e11d030505f354210ebf4874 328 Gene3D G3DSA:3.40.47.10 1 175 9.2E-50 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 DB29_03093 a5dc6684e11d030505f354210ebf4874 328 SUPERFAMILY SSF53901 3 175 3.69E-38 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 DB29_03093 a5dc6684e11d030505f354210ebf4874 328 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 243 327 1.2E-18 T 14-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 DB29_03093 a5dc6684e11d030505f354210ebf4874 328 Gene3D G3DSA:3.40.47.10 176 328 1.3E-33 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 DB29_03093 a5dc6684e11d030505f354210ebf4874 328 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 111 187 3.3E-18 T 14-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 DB29_01890 f7079bd1411c9cbb6ae5a456dc5b5aba 179 PIRSF PIRSF002161 1 179 4.0E-70 T 14-10-2018 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB29_01890 f7079bd1411c9cbb6ae5a456dc5b5aba 179 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 179 45.719 T 14-10-2018 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 DB29_01890 f7079bd1411c9cbb6ae5a456dc5b5aba 179 SUPERFAMILY SSF55282 3 178 2.1E-79 T 14-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB29_01890 f7079bd1411c9cbb6ae5a456dc5b5aba 179 Pfam PF00281 Ribosomal protein L5 24 80 2.7E-29 T 14-10-2018 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB29_01890 f7079bd1411c9cbb6ae5a456dc5b5aba 179 Gene3D G3DSA:3.30.1440.10 1 179 1.1E-84 T 14-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB29_01890 f7079bd1411c9cbb6ae5a456dc5b5aba 179 ProSitePatterns PS00358 Ribosomal protein L5 signature. 57 73 - T 14-10-2018 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB29_01890 f7079bd1411c9cbb6ae5a456dc5b5aba 179 Pfam PF00673 ribosomal L5P family C-terminus 84 177 5.0E-42 T 14-10-2018 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB29_01627 3efc6af96fb00cfd9e5ea5f3bac17307 257 Gene3D G3DSA:1.10.10.10 3 50 1.2E-6 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_01627 3efc6af96fb00cfd9e5ea5f3bac17307 257 Pfam PF08220 DeoR-like helix-turn-helix domain 5 60 5.8E-20 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DB29_01627 3efc6af96fb00cfd9e5ea5f3bac17307 257 SMART SM01134 70 231 2.2E-62 T 14-10-2018 DB29_01627 3efc6af96fb00cfd9e5ea5f3bac17307 257 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 37 55 3.3E-8 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DB29_01627 3efc6af96fb00cfd9e5ea5f3bac17307 257 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 23 37 3.3E-8 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DB29_01627 3efc6af96fb00cfd9e5ea5f3bac17307 257 SUPERFAMILY SSF46785 9 59 2.53E-11 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_01627 3efc6af96fb00cfd9e5ea5f3bac17307 257 ProSitePatterns PS00894 DeoR-type HTH domain signature. 5 39 - T 14-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 DB29_01627 3efc6af96fb00cfd9e5ea5f3bac17307 257 Pfam PF00455 DeoR C terminal sensor domain 72 229 3.2E-50 T 14-10-2018 IPR014036 DeoR C-terminal sensor domain DB29_01627 3efc6af96fb00cfd9e5ea5f3bac17307 257 SMART SM00420 5 57 2.1E-20 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DB29_01627 3efc6af96fb00cfd9e5ea5f3bac17307 257 SUPERFAMILY SSF100950 71 231 7.22E-34 T 14-10-2018 IPR037171 NagB/RpiA transferase-like DB29_01559 0c66bdd1508c71c7c0a3019336d72770 639 Gene3D G3DSA:3.40.50.2300 409 494 3.4E-12 T 14-10-2018 DB29_01559 0c66bdd1508c71c7c0a3019336d72770 639 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 502 637 2.5E-28 T 14-10-2018 IPR002178 PTS EIIA type-2 domain DB29_01559 0c66bdd1508c71c7c0a3019336d72770 639 Gene3D G3DSA:1.10.10.10 1 149 5.3E-13 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_01559 0c66bdd1508c71c7c0a3019336d72770 639 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 410 487 2.0E-7 T 14-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 DB29_01559 0c66bdd1508c71c7c0a3019336d72770 639 SUPERFAMILY SSF63520 184 281 1.03E-19 T 14-10-2018 IPR036634 PRD domain superfamily GO:0006355 DB29_01559 0c66bdd1508c71c7c0a3019336d72770 639 SUPERFAMILY SSF63520 297 402 4.19E-27 T 14-10-2018 IPR036634 PRD domain superfamily GO:0006355 DB29_01559 0c66bdd1508c71c7c0a3019336d72770 639 Gene3D G3DSA:1.10.1790.10 299 400 3.3E-27 T 14-10-2018 DB29_01559 0c66bdd1508c71c7c0a3019336d72770 639 SUPERFAMILY SSF55804 498 637 4.19E-28 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 DB29_01559 0c66bdd1508c71c7c0a3019336d72770 639 Gene3D G3DSA:1.10.1790.10 188 283 1.3E-13 T 14-10-2018 DB29_01559 0c66bdd1508c71c7c0a3019336d72770 639 SUPERFAMILY SSF52794 408 490 4.92E-9 T 14-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 DB29_01559 0c66bdd1508c71c7c0a3019336d72770 639 Pfam PF05043 Mga helix-turn-helix domain 97 165 7.0E-11 T 14-10-2018 IPR007737 Mga helix-turn-helix domain DB29_01559 0c66bdd1508c71c7c0a3019336d72770 639 Gene3D G3DSA:3.40.930.10 496 638 1.6E-24 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 DB29_01559 0c66bdd1508c71c7c0a3019336d72770 639 Pfam PF00874 PRD domain 196 281 2.0E-16 T 14-10-2018 IPR011608 PRD domain GO:0006355 DB29_01559 0c66bdd1508c71c7c0a3019336d72770 639 Pfam PF00874 PRD domain 309 398 2.9E-24 T 14-10-2018 IPR011608 PRD domain GO:0006355 DB29_01559 0c66bdd1508c71c7c0a3019336d72770 639 Pfam PF08279 HTH domain 4 62 1.2E-9 T 14-10-2018 IPR013196 Helix-turn-helix, type 11 DB29_02481 ee986455c0736810016222ee3aeb4047 647 SUPERFAMILY SSF54211 443 538 1.14E-14 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DB29_02481 ee986455c0736810016222ee3aeb4047 647 Pfam PF14492 Elongation Factor G, domain II 349 420 9.8E-10 T 14-10-2018 DB29_02481 ee986455c0736810016222ee3aeb4047 647 PRINTS PR01037 Tetracycline resistance protein TetO/TetQ/TetM family signature 271 297 2.3E-29 T 14-10-2018 DB29_02481 ee986455c0736810016222ee3aeb4047 647 PRINTS PR01037 Tetracycline resistance protein TetO/TetQ/TetM family signature 476 498 2.3E-29 T 14-10-2018 DB29_02481 ee986455c0736810016222ee3aeb4047 647 PRINTS PR01037 Tetracycline resistance protein TetO/TetQ/TetM family signature 216 238 2.3E-29 T 14-10-2018 DB29_02481 ee986455c0736810016222ee3aeb4047 647 PRINTS PR01037 Tetracycline resistance protein TetO/TetQ/TetM family signature 510 527 2.3E-29 T 14-10-2018 DB29_02481 ee986455c0736810016222ee3aeb4047 647 PRINTS PR01037 Tetracycline resistance protein TetO/TetQ/TetM family signature 109 132 2.3E-29 T 14-10-2018 DB29_02481 ee986455c0736810016222ee3aeb4047 647 PRINTS PR01037 Tetracycline resistance protein TetO/TetQ/TetM family signature 461 475 2.3E-29 T 14-10-2018 DB29_02481 ee986455c0736810016222ee3aeb4047 647 Pfam PF03764 Elongation factor G, domain IV 443 537 5.4E-13 T 14-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 DB29_02481 ee986455c0736810016222ee3aeb4047 647 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 44 59 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site DB29_02481 ee986455c0736810016222ee3aeb4047 647 SUPERFAMILY SSF50447 226 335 8.48E-8 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily DB29_02481 ee986455c0736810016222ee3aeb4047 647 Pfam PF00009 Elongation factor Tu GTP binding domain 2 239 1.0E-59 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DB29_02481 ee986455c0736810016222ee3aeb4047 647 Gene3D G3DSA:3.40.50.300 1 251 4.2E-76 T 14-10-2018 DB29_02481 ee986455c0736810016222ee3aeb4047 647 PRINTS PR00315 GTP-binding elongation factor signature 123 132 3.3E-17 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DB29_02481 ee986455c0736810016222ee3aeb4047 647 PRINTS PR00315 GTP-binding elongation factor signature 71 81 3.3E-17 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DB29_02481 ee986455c0736810016222ee3aeb4047 647 PRINTS PR00315 GTP-binding elongation factor signature 51 59 3.3E-17 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DB29_02481 ee986455c0736810016222ee3aeb4047 647 PRINTS PR00315 GTP-binding elongation factor signature 5 18 3.3E-17 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DB29_02481 ee986455c0736810016222ee3aeb4047 647 PRINTS PR00315 GTP-binding elongation factor signature 87 98 3.3E-17 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DB29_02481 ee986455c0736810016222ee3aeb4047 647 SMART SM00889 423 538 1.3E-11 T 14-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 DB29_02481 ee986455c0736810016222ee3aeb4047 647 Pfam PF00679 Elongation factor G C-terminus 541 623 1.1E-11 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like DB29_02481 ee986455c0736810016222ee3aeb4047 647 SUPERFAMILY SSF54980 348 424 7.19E-12 T 14-10-2018 IPR035647 EF-G domain III/V-like DB29_02481 ee986455c0736810016222ee3aeb4047 647 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 1 140 2.2E-30 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 DB29_02481 ee986455c0736810016222ee3aeb4047 647 SUPERFAMILY SSF54980 541 622 7.19E-9 T 14-10-2018 IPR035647 EF-G domain III/V-like DB29_02481 ee986455c0736810016222ee3aeb4047 647 Gene3D G3DSA:3.30.70.240 544 614 4.3E-20 T 14-10-2018 DB29_02481 ee986455c0736810016222ee3aeb4047 647 Gene3D G3DSA:3.30.230.10 445 622 4.3E-20 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DB29_02481 ee986455c0736810016222ee3aeb4047 647 Gene3D G3DSA:3.30.70.870 349 425 6.6E-12 T 14-10-2018 DB29_02481 ee986455c0736810016222ee3aeb4047 647 Gene3D G3DSA:2.40.30.10 252 346 4.0E-7 T 14-10-2018 DB29_02481 ee986455c0736810016222ee3aeb4047 647 SUPERFAMILY SSF52540 3 241 1.88E-72 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_00013 e53fb05e069f279a063444d22e7d79ef 403 Gene3D G3DSA:1.20.1250.20 3 392 3.3E-73 T 14-10-2018 DB29_00013 e53fb05e069f279a063444d22e7d79ef 403 PRINTS PR01035 Tetracycline resistance protein signature 164 184 2.8E-19 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 DB29_00013 e53fb05e069f279a063444d22e7d79ef 403 PRINTS PR01035 Tetracycline resistance protein signature 21 37 2.8E-19 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 DB29_00013 e53fb05e069f279a063444d22e7d79ef 403 PRINTS PR01035 Tetracycline resistance protein signature 342 365 2.8E-19 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 DB29_00013 e53fb05e069f279a063444d22e7d79ef 403 PRINTS PR01035 Tetracycline resistance protein signature 136 158 2.8E-19 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 DB29_00013 e53fb05e069f279a063444d22e7d79ef 403 Pfam PF07690 Major Facilitator Superfamily 15 358 7.8E-54 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DB29_00013 e53fb05e069f279a063444d22e7d79ef 403 SUPERFAMILY SSF103473 8 396 6.54E-74 T 14-10-2018 IPR036259 MFS transporter superfamily DB29_03760 41eeb56408e9669797f3aae09ea009a9 104 Gene3D G3DSA:3.30.700.10 12 100 1.0E-11 T 14-10-2018 DB29_03760 41eeb56408e9669797f3aae09ea009a9 104 SUPERFAMILY SSF54523 12 100 1.8E-14 T 14-10-2018 DB29_03760 41eeb56408e9669797f3aae09ea009a9 104 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 10 30 - T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site DB29_03760 41eeb56408e9669797f3aae09ea009a9 104 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 10 32 1.9E-9 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site DB29_03760 41eeb56408e9669797f3aae09ea009a9 104 Pfam PF07963 Prokaryotic N-terminal methylation motif 7 32 1.3E-9 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site DB29_03760 41eeb56408e9669797f3aae09ea009a9 104 PIRSF PIRSF029928 1 102 1.6E-34 T 14-10-2018 IPR016940 ComG operon protein C GO:0030420 DB29_02374 93b347f137fb8586c2e94db088c583f5 414 Gene3D G3DSA:3.30.1490.100 249 358 2.3E-19 T 14-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 DB29_02374 93b347f137fb8586c2e94db088c583f5 414 Gene3D G3DSA:1.10.150.20 182 235 1.6E-14 T 14-10-2018 DB29_02374 93b347f137fb8586c2e94db088c583f5 414 Gene3D G3DSA:3.30.70.270 7 159 1.4E-45 T 14-10-2018 DB29_02374 93b347f137fb8586c2e94db088c583f5 414 Pfam PF11799 impB/mucB/samB family C-terminal domain 246 354 3.0E-20 T 14-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 DB29_02374 93b347f137fb8586c2e94db088c583f5 414 SUPERFAMILY SSF56672 6 241 6.4E-69 T 14-10-2018 DB29_02374 93b347f137fb8586c2e94db088c583f5 414 SUPERFAMILY SSF100879 248 350 1.51E-20 T 14-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 DB29_02374 93b347f137fb8586c2e94db088c583f5 414 Hamap MF_01113 DNA polymerase IV [dinB]. 4 361 30.642 T 14-10-2018 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 DB29_02374 93b347f137fb8586c2e94db088c583f5 414 Gene3D G3DSA:2.30.40.20 24 77 1.4E-45 T 14-10-2018 DB29_02374 93b347f137fb8586c2e94db088c583f5 414 Pfam PF00817 impB/mucB/samB family 10 158 3.3E-44 T 14-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 DB29_01079 6d825a329122e13a94bf5476cbcc4c1a 389 SUPERFAMILY SSF53223 11 160 6.47E-56 T 14-10-2018 DB29_01079 6d825a329122e13a94bf5476cbcc4c1a 389 Pfam PF00390 Malic enzyme, N-terminal domain 18 150 3.7E-30 T 14-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 DB29_01079 6d825a329122e13a94bf5476cbcc4c1a 389 Pfam PF03949 Malic enzyme, NAD binding domain 164 383 1.8E-23 T 14-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 DB29_01079 6d825a329122e13a94bf5476cbcc4c1a 389 PRINTS PR00072 Malic enzyme signature 189 205 1.1E-9 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 DB29_01079 6d825a329122e13a94bf5476cbcc4c1a 389 PRINTS PR00072 Malic enzyme signature 158 174 1.1E-9 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 DB29_01079 6d825a329122e13a94bf5476cbcc4c1a 389 PRINTS PR00072 Malic enzyme signature 79 101 1.1E-9 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 DB29_01079 6d825a329122e13a94bf5476cbcc4c1a 389 ProSitePatterns PS00331 Malic enzymes signature. 158 174 - T 14-10-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 DB29_01079 6d825a329122e13a94bf5476cbcc4c1a 389 SMART SM01274 17 150 3.1E-84 T 14-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 DB29_01079 6d825a329122e13a94bf5476cbcc4c1a 389 Gene3D G3DSA:3.40.50.10380 1 159 3.8E-73 T 14-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 DB29_01079 6d825a329122e13a94bf5476cbcc4c1a 389 Gene3D G3DSA:3.40.50.720 160 389 2.2E-76 T 14-10-2018 DB29_01079 6d825a329122e13a94bf5476cbcc4c1a 389 SMART SM00919 162 384 6.3E-115 T 14-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 DB29_01079 6d825a329122e13a94bf5476cbcc4c1a 389 SUPERFAMILY SSF51735 162 385 2.93E-69 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_01079 6d825a329122e13a94bf5476cbcc4c1a 389 PIRSF PIRSF000106 27 389 1.8E-77 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 DB29_03944 34ea8ef058fc257b501a16a9be24c8c7 154 Pfam PF00156 Phosphoribosyl transferase domain 9 120 2.4E-17 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 DB29_03944 34ea8ef058fc257b501a16a9be24c8c7 154 SUPERFAMILY SSF53271 2 148 1.7E-38 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like DB29_03944 34ea8ef058fc257b501a16a9be24c8c7 154 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 154 21.156 T 14-10-2018 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 DB29_03944 34ea8ef058fc257b501a16a9be24c8c7 154 Gene3D G3DSA:3.40.50.2020 1 154 2.6E-42 T 14-10-2018 DB29_00897 4a85c563fdb96d6425b3e78fed04fe89 152 Gene3D G3DSA:3.40.50.360 1 145 3.8E-37 T 14-10-2018 IPR029039 Flavoprotein-like superfamily DB29_00897 4a85c563fdb96d6425b3e78fed04fe89 152 Pfam PF00258 Flavodoxin 5 137 4.2E-30 T 14-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 DB29_00897 4a85c563fdb96d6425b3e78fed04fe89 152 TIGRFAM TIGR01753 flav_short: flavodoxin 3 142 1.1E-43 T 14-10-2018 IPR010087 Flavodoxin, short chain GO:0010181 DB29_00897 4a85c563fdb96d6425b3e78fed04fe89 152 SUPERFAMILY SSF52218 1 147 2.74E-39 T 14-10-2018 IPR029039 Flavoprotein-like superfamily DB29_00897 4a85c563fdb96d6425b3e78fed04fe89 152 ProSitePatterns PS00201 Flavodoxin signature. 5 21 - T 14-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 DB29_00508 9244d2d1c5234e65589f5a0305856635 74 Pfam PF17277 Family of unknown function (DUF5342) 2 69 2.5E-28 T 14-10-2018 IPR017263 Uncharacterised conserved protein UCP037692 DB29_00508 9244d2d1c5234e65589f5a0305856635 74 ProDom PD056348 YHEE BH1143 1 69 2.0E-35 T 14-10-2018 IPR017263 Uncharacterised conserved protein UCP037692 DB29_00508 9244d2d1c5234e65589f5a0305856635 74 PIRSF PIRSF037692 1 71 1.4E-36 T 14-10-2018 IPR017263 Uncharacterised conserved protein UCP037692 DB29_02927 b6df0b49d646c290a7bcbcd5c7e2e649 208 Gene3D G3DSA:3.20.20.70 1 207 7.5E-68 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DB29_02927 b6df0b49d646c290a7bcbcd5c7e2e649 208 TIGRFAM TIGR03128 RuMP_HxlA: 3-hexulose-6-phosphate synthase 2 204 8.5E-80 T 14-10-2018 IPR017553 3-hexulose-6-phosphate synthase GO:0005975|GO:0043801 KEGG: 00030+4.1.2.43|KEGG: 00680+4.1.2.43|MetaCyc: PWY-1861|MetaCyc: PWY-7796 DB29_02927 b6df0b49d646c290a7bcbcd5c7e2e649 208 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 2 198 5.2E-25 T 14-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 DB29_02927 b6df0b49d646c290a7bcbcd5c7e2e649 208 SMART SM00934 2 200 2.1E-37 T 14-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 DB29_02927 b6df0b49d646c290a7bcbcd5c7e2e649 208 SUPERFAMILY SSF51366 2 204 1.62E-33 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 DB29_00431 2ba4d6a3480dc00497b77a9c50712158 219 Gene3D G3DSA:1.25.40.10 139 218 5.7E-14 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DB29_00431 2ba4d6a3480dc00497b77a9c50712158 219 Gene3D G3DSA:1.25.40.10 73 138 2.3E-11 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DB29_00431 2ba4d6a3480dc00497b77a9c50712158 219 SUPERFAMILY SSF48452 6 212 2.4E-37 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DB29_00431 2ba4d6a3480dc00497b77a9c50712158 219 SMART SM00028 101 134 1.1 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DB29_00431 2ba4d6a3480dc00497b77a9c50712158 219 SMART SM00028 169 202 3.5E-4 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DB29_00431 2ba4d6a3480dc00497b77a9c50712158 219 SMART SM00028 33 66 3.4E-5 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DB29_00431 2ba4d6a3480dc00497b77a9c50712158 219 SMART SM00028 135 168 9.3 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DB29_00431 2ba4d6a3480dc00497b77a9c50712158 219 SMART SM00028 67 100 4.2 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DB29_00431 2ba4d6a3480dc00497b77a9c50712158 219 Pfam PF13181 Tetratricopeptide repeat 101 133 0.026 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DB29_00431 2ba4d6a3480dc00497b77a9c50712158 219 Pfam PF13432 Tetratricopeptide repeat 152 201 7.3E-8 T 14-10-2018 DB29_00431 2ba4d6a3480dc00497b77a9c50712158 219 Pfam PF13424 Tetratricopeptide repeat 36 95 9.3E-10 T 14-10-2018 DB29_00431 2ba4d6a3480dc00497b77a9c50712158 219 Gene3D G3DSA:1.25.40.10 1 72 9.3E-16 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DB29_03990 33afe5fcf2a1a38293a2f7b1c8d8cadd 184 Pfam PF00717 Peptidase S24-like 34 101 1.5E-20 T 14-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C DB29_03990 33afe5fcf2a1a38293a2f7b1c8d8cadd 184 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 27 43 2.8E-20 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 DB29_03990 33afe5fcf2a1a38293a2f7b1c8d8cadd 184 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 77 89 2.8E-20 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 DB29_03990 33afe5fcf2a1a38293a2f7b1c8d8cadd 184 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 136 155 2.8E-20 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 DB29_03990 33afe5fcf2a1a38293a2f7b1c8d8cadd 184 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 10 176 1.8E-52 T 14-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 DB29_03990 33afe5fcf2a1a38293a2f7b1c8d8cadd 184 ProSitePatterns PS00760 Signal peptidases I lysine active site. 79 91 - T 14-10-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 DB29_03990 33afe5fcf2a1a38293a2f7b1c8d8cadd 184 ProSitePatterns PS00501 Signal peptidases I serine active site. 36 43 - T 14-10-2018 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 DB29_03990 33afe5fcf2a1a38293a2f7b1c8d8cadd 184 ProSitePatterns PS00761 Signal peptidases I signature 3. 141 154 - T 14-10-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 DB29_03990 33afe5fcf2a1a38293a2f7b1c8d8cadd 184 SUPERFAMILY SSF51306 25 181 6.02E-51 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily DB29_03990 33afe5fcf2a1a38293a2f7b1c8d8cadd 184 Gene3D G3DSA:2.10.109.10 58 183 5.3E-43 T 14-10-2018 DB29_01922 79525d0eb25f175277cc36f93e58f975 466 Gene3D G3DSA:3.40.50.620 1 304 6.1E-135 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DB29_01922 79525d0eb25f175277cc36f93e58f975 466 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 2 465 39.719 T 14-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 DB29_01922 79525d0eb25f175277cc36f93e58f975 466 SUPERFAMILY SSF47323 338 464 1.96E-36 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 DB29_01922 79525d0eb25f175277cc36f93e58f975 466 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 15 311 1.7E-134 T 14-10-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 DB29_01922 79525d0eb25f175277cc36f93e58f975 466 Gene3D G3DSA:1.20.120.640 305 464 8.2E-39 T 14-10-2018 DB29_01922 79525d0eb25f175277cc36f93e58f975 466 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 190 208 5.8E-29 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 DB29_01922 79525d0eb25f175277cc36f93e58f975 466 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 61 70 5.8E-29 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 DB29_01922 79525d0eb25f175277cc36f93e58f975 466 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 221 242 5.8E-29 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 DB29_01922 79525d0eb25f175277cc36f93e58f975 466 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 25 36 5.8E-29 T 14-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 DB29_01922 79525d0eb25f175277cc36f93e58f975 466 Pfam PF09190 DALR domain 351 415 6.2E-21 T 14-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 DB29_01922 79525d0eb25f175277cc36f93e58f975 466 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 2 464 3.3E-187 T 14-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 DB29_01922 79525d0eb25f175277cc36f93e58f975 466 SMART SM00840 351 416 2.8E-23 T 14-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 DB29_01922 79525d0eb25f175277cc36f93e58f975 466 SUPERFAMILY SSF52374 2 311 1.15E-105 T 14-10-2018 DB29_00275 b5a29ee9c4be3faee3ec0a19ef3cda7c 523 SUPERFAMILY SSF48452 401 501 4.96E-15 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DB29_00275 b5a29ee9c4be3faee3ec0a19ef3cda7c 523 Gene3D G3DSA:1.20.1540.10 177 369 2.0E-47 T 14-10-2018 IPR035952 Rhomboid-like superfamily DB29_00275 b5a29ee9c4be3faee3ec0a19ef3cda7c 523 SUPERFAMILY SSF144091 181 361 1.57E-41 T 14-10-2018 DB29_00275 b5a29ee9c4be3faee3ec0a19ef3cda7c 523 SMART SM00028 468 501 0.002 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DB29_00275 b5a29ee9c4be3faee3ec0a19ef3cda7c 523 SMART SM00028 400 433 230.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DB29_00275 b5a29ee9c4be3faee3ec0a19ef3cda7c 523 Gene3D G3DSA:1.25.40.10 391 507 1.4E-14 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DB29_00275 b5a29ee9c4be3faee3ec0a19ef3cda7c 523 Pfam PF13432 Tetratricopeptide repeat 406 453 6.8E-4 T 14-10-2018 DB29_00275 b5a29ee9c4be3faee3ec0a19ef3cda7c 523 Pfam PF01694 Rhomboid family 224 359 2.3E-32 T 14-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 DB29_00116 ecc8ad70775b40ff84b7e513ade26916 1148 Gene3D G3DSA:3.20.20.20 321 615 4.9E-105 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DB29_00116 ecc8ad70775b40ff84b7e513ade26916 1148 SUPERFAMILY SSF51717 336 595 1.01E-79 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DB29_00116 ecc8ad70775b40ff84b7e513ade26916 1148 SUPERFAMILY SSF56507 867 1146 6.93E-88 T 14-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DB29_00116 ecc8ad70775b40ff84b7e513ade26916 1148 SUPERFAMILY SSF52242 707 844 3.01E-38 T 14-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 DB29_00116 ecc8ad70775b40ff84b7e513ade26916 1148 Gene3D G3DSA:1.10.1240.10 616 703 2.3E-28 T 14-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DB29_00116 ecc8ad70775b40ff84b7e513ade26916 1148 TIGRFAM TIGR02082 metH: methionine synthase 11 1145 0.0 T 14-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DB29_00116 ecc8ad70775b40ff84b7e513ade26916 1148 Pfam PF02310 B12 binding domain 713 804 1.4E-17 T 14-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 DB29_00116 ecc8ad70775b40ff84b7e513ade26916 1148 SUPERFAMILY SSF47644 619 705 9.42E-25 T 14-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DB29_00116 ecc8ad70775b40ff84b7e513ade26916 1148 Gene3D G3DSA:3.10.196.10 874 1147 2.1E-61 T 14-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DB29_00116 ecc8ad70775b40ff84b7e513ade26916 1148 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 899 1147 3.7E-57 T 14-10-2018 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DB29_00116 ecc8ad70775b40ff84b7e513ade26916 1148 Gene3D G3DSA:1.10.288.10 897 955 2.1E-61 T 14-10-2018 DB29_00116 ecc8ad70775b40ff84b7e513ade26916 1148 PIRSF PIRSF000381 1 1148 0.0 T 14-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DB29_00116 ecc8ad70775b40ff84b7e513ade26916 1148 Pfam PF02607 B12 binding domain 626 699 2.7E-23 T 14-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DB29_00116 ecc8ad70775b40ff84b7e513ade26916 1148 Gene3D G3DSA:3.40.50.280 709 859 7.7E-44 T 14-10-2018 DB29_00116 ecc8ad70775b40ff84b7e513ade26916 1148 SUPERFAMILY SSF82282 5 378 6.28E-109 T 14-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 DB29_00116 ecc8ad70775b40ff84b7e513ade26916 1148 Pfam PF02574 Homocysteine S-methyltransferase 15 304 2.1E-71 T 14-10-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 DB29_00116 ecc8ad70775b40ff84b7e513ade26916 1148 Gene3D G3DSA:3.20.20.330 2 320 5.1E-105 T 14-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 DB29_00116 ecc8ad70775b40ff84b7e513ade26916 1148 Pfam PF00809 Pterin binding enzyme 339 572 1.0E-42 T 14-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DB29_00116 ecc8ad70775b40ff84b7e513ade26916 1148 SMART SM01018 623 706 1.1E-37 T 14-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DB29_03290 c82eccbf8051610f1c123c39a22753b8 76 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 3 74 8.8E-22 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 DB29_03290 c82eccbf8051610f1c123c39a22753b8 76 PRINTS PR01651 Protein-export SecG membrane protein signature 56 76 5.4E-9 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 DB29_03290 c82eccbf8051610f1c123c39a22753b8 76 PRINTS PR01651 Protein-export SecG membrane protein signature 23 37 5.4E-9 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 DB29_03290 c82eccbf8051610f1c123c39a22753b8 76 PRINTS PR01651 Protein-export SecG membrane protein signature 3 23 5.4E-9 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 DB29_03290 c82eccbf8051610f1c123c39a22753b8 76 Pfam PF03840 Preprotein translocase SecG subunit 4 71 3.0E-21 T 14-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 DB29_03960 14bac2ae21317ef76b6e6168ea44babe 293 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 39 283 1.2E-84 T 14-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 DB29_03960 14bac2ae21317ef76b6e6168ea44babe 293 Pfam PF16745 RsgA N-terminal domain 3 56 3.4E-25 T 14-10-2018 IPR031944 Ribosome biogenesis GTPase RsgA, N-terminal DB29_03960 14bac2ae21317ef76b6e6168ea44babe 293 Gene3D G3DSA:3.40.50.300 62 225 5.9E-47 T 14-10-2018 DB29_03960 14bac2ae21317ef76b6e6168ea44babe 293 SUPERFAMILY SSF50249 1 63 6.28E-16 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DB29_03960 14bac2ae21317ef76b6e6168ea44babe 293 Hamap MF_01820 Small ribosomal subunit biogenesis GTPase RsgA [rsgA]. 2 290 39.342 T 14-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 DB29_03960 14bac2ae21317ef76b6e6168ea44babe 293 Gene3D G3DSA:1.10.40.50 226 293 3.5E-23 T 14-10-2018 DB29_03960 14bac2ae21317ef76b6e6168ea44babe 293 SUPERFAMILY SSF52540 65 291 3.06E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_03960 14bac2ae21317ef76b6e6168ea44babe 293 Pfam PF03193 RsgA GTPase 59 225 1.5E-60 T 14-10-2018 IPR010914 RsgA GTPase domain GO:0003924|GO:0005525 DB29_03960 14bac2ae21317ef76b6e6168ea44babe 293 Gene3D G3DSA:2.40.50.140 1 61 9.5E-26 T 14-10-2018 DB29_01245 0585f0a0c5a90a6f82171fccd6057449 424 Pfam PF16360 GTP-binding GTPase Middle Region 116 197 1.8E-28 T 14-10-2018 IPR032305 GTP-binding protein, middle domain DB29_01245 0585f0a0c5a90a6f82171fccd6057449 424 Hamap MF_00900 GTPase HflX [hflX]. 29 392 48.737 T 14-10-2018 IPR016496 GTPase HflX GO:0005525 DB29_01245 0585f0a0c5a90a6f82171fccd6057449 424 PIRSF PIRSF006809 3 424 1.3E-151 T 14-10-2018 IPR016496 GTPase HflX GO:0005525 DB29_01245 0585f0a0c5a90a6f82171fccd6057449 424 Gene3D G3DSA:3.40.50.11060 19 140 6.2E-39 T 14-10-2018 DB29_01245 0585f0a0c5a90a6f82171fccd6057449 424 SUPERFAMILY SSF52540 203 367 7.36E-35 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_01245 0585f0a0c5a90a6f82171fccd6057449 424 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 12 362 1.4E-132 T 14-10-2018 IPR016496 GTPase HflX GO:0005525 DB29_01245 0585f0a0c5a90a6f82171fccd6057449 424 Pfam PF01926 50S ribosome-binding GTPase 205 326 1.2E-20 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 DB29_01245 0585f0a0c5a90a6f82171fccd6057449 424 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 205 225 4.2E-7 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 DB29_01245 0585f0a0c5a90a6f82171fccd6057449 424 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 276 294 4.2E-7 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 DB29_01245 0585f0a0c5a90a6f82171fccd6057449 424 Gene3D G3DSA:3.40.50.300 202 370 2.3E-37 T 14-10-2018 DB29_01245 0585f0a0c5a90a6f82171fccd6057449 424 Pfam PF13167 GTP-binding GTPase N-terminal 27 113 3.6E-31 T 14-10-2018 IPR025121 GTPase HflX, N-terminal DB29_00361 40fc6bb8f24cb0e2b5b4817e8e0d5280 204 Pfam PF12836 Helix-hairpin-helix motif 140 202 1.3E-21 T 14-10-2018 DB29_00361 40fc6bb8f24cb0e2b5b4817e8e0d5280 204 Gene3D G3DSA:3.10.20.600 54 107 4.1E-5 T 14-10-2018 DB29_00361 40fc6bb8f24cb0e2b5b4817e8e0d5280 204 SUPERFAMILY SSF47781 129 198 2.22E-26 T 14-10-2018 IPR010994 RuvA domain 2-like DB29_00361 40fc6bb8f24cb0e2b5b4817e8e0d5280 204 Gene3D G3DSA:1.10.150.280 131 202 4.1E-23 T 14-10-2018 DB29_00361 40fc6bb8f24cb0e2b5b4817e8e0d5280 204 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 142 197 4.5E-21 T 14-10-2018 IPR004509 Competence protein ComEA, helix-hairpin-helix domain DB29_00361 40fc6bb8f24cb0e2b5b4817e8e0d5280 204 Pfam PF10531 SLBB domain 63 113 1.1E-14 T 14-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DB29_00361 40fc6bb8f24cb0e2b5b4817e8e0d5280 204 SMART SM00278 151 170 0.83 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 DB29_00361 40fc6bb8f24cb0e2b5b4817e8e0d5280 204 SMART SM00278 181 200 23.0 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 DB29_00154 41dc1a3fbdc44c773ff303f149fbe271 597 Gene3D G3DSA:3.30.565.10 437 595 3.3E-46 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB29_00154 41dc1a3fbdc44c773ff303f149fbe271 597 SMART SM00388 367 434 4.5E-22 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DB29_00154 41dc1a3fbdc44c773ff303f149fbe271 597 Pfam PF00989 PAS fold 254 358 2.4E-5 T 14-10-2018 IPR013767 PAS fold GO:0006355 DB29_00154 41dc1a3fbdc44c773ff303f149fbe271 597 PRINTS PR00344 Bacterial sensor protein C-terminal signature 576 589 1.5E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB29_00154 41dc1a3fbdc44c773ff303f149fbe271 597 PRINTS PR00344 Bacterial sensor protein C-terminal signature 517 531 1.5E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB29_00154 41dc1a3fbdc44c773ff303f149fbe271 597 PRINTS PR00344 Bacterial sensor protein C-terminal signature 552 570 1.5E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB29_00154 41dc1a3fbdc44c773ff303f149fbe271 597 PRINTS PR00344 Bacterial sensor protein C-terminal signature 535 545 1.5E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB29_00154 41dc1a3fbdc44c773ff303f149fbe271 597 SUPERFAMILY SSF55874 423 590 9.17E-52 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB29_00154 41dc1a3fbdc44c773ff303f149fbe271 597 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 481 591 1.5E-28 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DB29_00154 41dc1a3fbdc44c773ff303f149fbe271 597 Pfam PF00672 HAMP domain 196 244 1.9E-15 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DB29_00154 41dc1a3fbdc44c773ff303f149fbe271 597 Gene3D G3DSA:3.30.450.20 244 358 3.2E-18 T 14-10-2018 DB29_00154 41dc1a3fbdc44c773ff303f149fbe271 597 SMART SM00304 195 247 5.8E-15 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DB29_00154 41dc1a3fbdc44c773ff303f149fbe271 597 Gene3D G3DSA:1.10.8.500 194 243 8.7E-13 T 14-10-2018 DB29_00154 41dc1a3fbdc44c773ff303f149fbe271 597 Gene3D G3DSA:1.10.287.130 359 436 1.4E-25 T 14-10-2018 DB29_00154 41dc1a3fbdc44c773ff303f149fbe271 597 SUPERFAMILY SSF55785 241 359 4.61E-8 T 14-10-2018 IPR035965 PAS domain superfamily DB29_00154 41dc1a3fbdc44c773ff303f149fbe271 597 SUPERFAMILY SSF158472 196 244 8.89E-11 T 14-10-2018 DB29_00154 41dc1a3fbdc44c773ff303f149fbe271 597 SUPERFAMILY SSF47384 351 434 7.85E-21 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DB29_00154 41dc1a3fbdc44c773ff303f149fbe271 597 SMART SM00387 480 592 5.2E-43 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DB29_00154 41dc1a3fbdc44c773ff303f149fbe271 597 Pfam PF00512 His Kinase A (phospho-acceptor) domain 368 434 3.4E-19 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DB29_04369 77b5b2c0ea6b85ebd8e37c865472f44b 344 Pfam PF00571 CBS domain 293 339 1.6E-7 T 14-10-2018 IPR000644 CBS domain DB29_04369 77b5b2c0ea6b85ebd8e37c865472f44b 344 SUPERFAMILY SSF54631 288 338 1.1E-8 T 14-10-2018 DB29_04369 77b5b2c0ea6b85ebd8e37c865472f44b 344 SUPERFAMILY SSF52540 2 239 8.7E-76 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_04369 77b5b2c0ea6b85ebd8e37c865472f44b 344 Gene3D G3DSA:3.10.580.10 291 343 3.2E-6 T 14-10-2018 DB29_04369 77b5b2c0ea6b85ebd8e37c865472f44b 344 SMART SM00116 294 341 1.1E-4 T 14-10-2018 IPR000644 CBS domain DB29_04369 77b5b2c0ea6b85ebd8e37c865472f44b 344 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB29_04369 77b5b2c0ea6b85ebd8e37c865472f44b 344 SMART SM00382 27 214 1.9E-21 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_04369 77b5b2c0ea6b85ebd8e37c865472f44b 344 Gene3D G3DSA:3.40.50.300 1 286 7.4E-78 T 14-10-2018 DB29_04369 77b5b2c0ea6b85ebd8e37c865472f44b 344 Pfam PF00005 ABC transporter 19 164 4.6E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB29_02786 304bdfa50d58c018f7fd7bff29a57bef 436 SUPERFAMILY SSF58104 183 421 2.49E-43 T 14-10-2018 DB29_02786 304bdfa50d58c018f7fd7bff29a57bef 436 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 194 223 8.1E-15 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DB29_02786 304bdfa50d58c018f7fd7bff29a57bef 436 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 275 302 8.1E-15 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DB29_02786 304bdfa50d58c018f7fd7bff29a57bef 436 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 304 333 8.1E-15 T 14-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 DB29_02786 304bdfa50d58c018f7fd7bff29a57bef 436 SMART SM00283 180 425 5.4E-18 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DB29_02786 304bdfa50d58c018f7fd7bff29a57bef 436 Gene3D G3DSA:1.10.490.10 6 159 2.5E-40 T 14-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 DB29_02786 304bdfa50d58c018f7fd7bff29a57bef 436 Pfam PF11563 Protoglobin 14 168 2.1E-45 T 14-10-2018 DB29_02786 304bdfa50d58c018f7fd7bff29a57bef 436 SUPERFAMILY SSF46458 4 160 9.83E-42 T 14-10-2018 IPR009050 Globin-like superfamily DB29_02786 304bdfa50d58c018f7fd7bff29a57bef 436 Gene3D G3DSA:1.10.287.950 160 435 1.3E-41 T 14-10-2018 DB29_02786 304bdfa50d58c018f7fd7bff29a57bef 436 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 247 400 7.2E-32 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DB29_01069 881a7bb1f540359f50f30caa157e9362 256 Gene3D G3DSA:3.30.70.1070 186 255 4.8E-27 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 DB29_01069 881a7bb1f540359f50f30caa157e9362 256 SUPERFAMILY SSF53187 1 177 2.98E-52 T 14-10-2018 DB29_01069 881a7bb1f540359f50f30caa157e9362 256 Pfam PF05036 Sporulation related domain 186 255 1.1E-18 T 14-10-2018 IPR007730 Sporulation-like domain GO:0042834 DB29_01069 881a7bb1f540359f50f30caa157e9362 256 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 4 172 2.1E-46 T 14-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 DB29_01069 881a7bb1f540359f50f30caa157e9362 256 SUPERFAMILY SSF110997 184 254 9.29E-20 T 14-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 DB29_01069 881a7bb1f540359f50f30caa157e9362 256 SMART SM00646 64 172 3.1E-46 T 14-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 DB29_01069 881a7bb1f540359f50f30caa157e9362 256 Gene3D G3DSA:3.40.630.40 1 180 3.7E-55 T 14-10-2018 DB29_01195 de0a88a4ed32531c0211f088e60e8bbc 410 SMART SM01005 254 381 8.1E-63 T 14-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DB29_01195 de0a88a4ed32531c0211f088e60e8bbc 410 Gene3D G3DSA:2.40.37.10 16 378 6.2E-122 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 DB29_01195 de0a88a4ed32531c0211f088e60e8bbc 410 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 43 53 - T 14-10-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DB29_01195 de0a88a4ed32531c0211f088e60e8bbc 410 Pfam PF00842 Alanine racemase, C-terminal domain 254 380 1.1E-40 T 14-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DB29_01195 de0a88a4ed32531c0211f088e60e8bbc 410 SUPERFAMILY SSF51419 16 255 2.76E-60 T 14-10-2018 IPR029066 PLP-binding barrel DB29_01195 de0a88a4ed32531c0211f088e60e8bbc 410 Pfam PF01168 Alanine racemase, N-terminal domain 16 239 2.1E-65 T 14-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DB29_01195 de0a88a4ed32531c0211f088e60e8bbc 410 Hamap MF_01201 Alanine racemase. 9 381 33.819 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DB29_01195 de0a88a4ed32531c0211f088e60e8bbc 410 SUPERFAMILY SSF50621 249 388 6.63E-47 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 DB29_01195 de0a88a4ed32531c0211f088e60e8bbc 410 Gene3D G3DSA:3.20.20.10 18 244 6.2E-122 T 14-10-2018 IPR029066 PLP-binding barrel DB29_01195 de0a88a4ed32531c0211f088e60e8bbc 410 TIGRFAM TIGR00492 alr: alanine racemase 10 381 3.3E-117 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DB29_01195 de0a88a4ed32531c0211f088e60e8bbc 410 PRINTS PR00992 Alanine racemase signature 309 326 5.4E-58 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DB29_01195 de0a88a4ed32531c0211f088e60e8bbc 410 PRINTS PR00992 Alanine racemase signature 38 54 5.4E-58 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DB29_01195 de0a88a4ed32531c0211f088e60e8bbc 410 PRINTS PR00992 Alanine racemase signature 270 285 5.4E-58 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DB29_01195 de0a88a4ed32531c0211f088e60e8bbc 410 PRINTS PR00992 Alanine racemase signature 74 92 5.4E-58 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DB29_01195 de0a88a4ed32531c0211f088e60e8bbc 410 PRINTS PR00992 Alanine racemase signature 212 239 5.4E-58 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DB29_01195 de0a88a4ed32531c0211f088e60e8bbc 410 PRINTS PR00992 Alanine racemase signature 136 148 5.4E-58 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DB29_01195 de0a88a4ed32531c0211f088e60e8bbc 410 PRINTS PR00992 Alanine racemase signature 363 376 5.4E-58 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DB29_01195 de0a88a4ed32531c0211f088e60e8bbc 410 PRINTS PR00992 Alanine racemase signature 169 180 5.4E-58 T 14-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DB29_01009 89dfa4bad350ed6a09694f2ed9e9e039 475 Pfam PF02589 LUD domain 71 295 1.1E-57 T 14-10-2018 IPR003741 LUD domain DB29_01009 89dfa4bad350ed6a09694f2ed9e9e039 475 TIGRFAM TIGR00273 TIGR00273: iron-sulfur cluster-binding protein 18 454 1.4E-197 T 14-10-2018 IPR004452 4Fe-4S binding protein GO:0019516 DB29_01009 89dfa4bad350ed6a09694f2ed9e9e039 475 Gene3D G3DSA:3.40.50.10420 121 295 1.7E-15 T 14-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily DB29_01009 89dfa4bad350ed6a09694f2ed9e9e039 475 Pfam PF13183 4Fe-4S dicluster domain 310 377 6.2E-9 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DB29_01009 89dfa4bad350ed6a09694f2ed9e9e039 475 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 313 324 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DB29_01009 89dfa4bad350ed6a09694f2ed9e9e039 475 Pfam PF11870 Domain of unknown function (DUF3390) 388 470 2.1E-19 T 14-10-2018 IPR024569 4Fe-4S binding protein, C-terminal DB29_01009 89dfa4bad350ed6a09694f2ed9e9e039 475 Hamap MF_02103 Lactate utilization protein B [lutB]. 1 474 67.162 T 14-10-2018 IPR022825 Lactate utilization protein B DB29_01009 89dfa4bad350ed6a09694f2ed9e9e039 475 SUPERFAMILY SSF100950 65 296 5.44E-41 T 14-10-2018 IPR037171 NagB/RpiA transferase-like DB29_01009 89dfa4bad350ed6a09694f2ed9e9e039 475 SUPERFAMILY SSF46548 284 393 5.76E-16 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 DB29_00459 df83ab4d1c3e14b7992510340539b5ec 126 Pfam PF12670 Protein of unknown function (DUF3792) 9 118 1.6E-20 T 14-10-2018 IPR023804 Protein of unknown function DUF3792, transmembrane DB29_00459 df83ab4d1c3e14b7992510340539b5ec 126 TIGRFAM TIGR04086 TIGR04086_membr: putative membrane protein, TIGR04086 family 9 121 2.6E-27 T 14-10-2018 IPR023804 Protein of unknown function DUF3792, transmembrane DB29_03784 3d459612713dd475488f332a685fa407 185 SMART SM00841 129 184 2.4E-35 T 14-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 DB29_03784 3d459612713dd475488f332a685fa407 185 PIRSF PIRSF005901 1 185 2.4E-71 T 14-10-2018 IPR020599 Translation elongation factor P/YeiP DB29_03784 3d459612713dd475488f332a685fa407 185 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 3 60 2.0E-28 T 14-10-2018 IPR013185 Translation elongation factor, KOW-like DB29_03784 3d459612713dd475488f332a685fa407 185 Gene3D G3DSA:2.40.50.140 128 185 2.0E-27 T 14-10-2018 DB29_03784 3d459612713dd475488f332a685fa407 185 SUPERFAMILY SSF50104 1 62 9.63E-22 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily DB29_03784 3d459612713dd475488f332a685fa407 185 Pfam PF09285 Elongation factor P, C-terminal 129 184 6.6E-28 T 14-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 DB29_03784 3d459612713dd475488f332a685fa407 185 SMART SM01185 67 121 1.3E-23 T 14-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 DB29_03784 3d459612713dd475488f332a685fa407 185 SUPERFAMILY SSF50249 128 185 6.85E-20 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DB29_03784 3d459612713dd475488f332a685fa407 185 Hamap MF_00141 Elongation factor P [efp]. 1 185 51.265 T 14-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 DB29_03784 3d459612713dd475488f332a685fa407 185 Pfam PF01132 Elongation factor P (EF-P) OB domain 68 119 1.4E-20 T 14-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 DB29_03784 3d459612713dd475488f332a685fa407 185 ProSitePatterns PS01275 Elongation factor P signature. 150 169 - T 14-10-2018 IPR013852 Translation elongation factor P/YeiP, conserved site DB29_03784 3d459612713dd475488f332a685fa407 185 Gene3D G3DSA:2.30.30.30 1 62 2.4E-31 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 DB29_03784 3d459612713dd475488f332a685fa407 185 Gene3D G3DSA:2.40.50.140 64 127 1.2E-24 T 14-10-2018 DB29_03784 3d459612713dd475488f332a685fa407 185 TIGRFAM TIGR00038 efp: translation elongation factor P 2 185 2.4E-80 T 14-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 DB29_03784 3d459612713dd475488f332a685fa407 185 SUPERFAMILY SSF50249 65 129 2.43E-20 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DB29_02053 c797cb249aa4913951711a71484dd898 830 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 33 470 1.1E-162 T 14-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 DB29_02053 c797cb249aa4913951711a71484dd898 830 SUPERFAMILY SSF101904 498 816 8.89E-115 T 14-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal DB29_02053 c797cb249aa4913951711a71484dd898 830 SMART SM00434 12 464 3.9E-298 T 14-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 DB29_02053 c797cb249aa4913951711a71484dd898 830 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 3 806 24.881 T 14-10-2018 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 DB29_02053 c797cb249aa4913951711a71484dd898 830 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 11 804 0.0 T 14-10-2018 DB29_02053 c797cb249aa4913951711a71484dd898 830 Gene3D G3DSA:3.30.1360.40 237 332 5.5E-219 T 14-10-2018 DB29_02053 c797cb249aa4913951711a71484dd898 830 Gene3D G3DSA:2.120.10.90 496 806 5.3E-130 T 14-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal DB29_02053 c797cb249aa4913951711a71484dd898 830 Gene3D G3DSA:1.10.268.10 369 458 5.5E-219 T 14-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 DB29_02053 c797cb249aa4913951711a71484dd898 830 Gene3D G3DSA:3.90.199.10 33 484 5.5E-219 T 14-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 DB29_02053 c797cb249aa4913951711a71484dd898 830 SUPERFAMILY SSF56719 31 486 1.83E-182 T 14-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 DB29_02053 c797cb249aa4913951711a71484dd898 830 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 554 602 4.1E-11 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 DB29_02053 c797cb249aa4913951711a71484dd898 830 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 708 754 1.3E-13 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 DB29_02053 c797cb249aa4913951711a71484dd898 830 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 658 704 8.0E-15 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 DB29_02053 c797cb249aa4913951711a71484dd898 830 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 610 653 3.6E-9 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 DB29_02053 c797cb249aa4913951711a71484dd898 830 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 504 550 1.2E-15 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 DB29_02053 c797cb249aa4913951711a71484dd898 830 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 758 805 1.3E-13 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 DB29_00354 95b04f2054680a197ddc5dbf245f9950 392 SUPERFAMILY SSF53187 260 383 4.71E-6 T 14-10-2018 DB29_00354 95b04f2054680a197ddc5dbf245f9950 392 TIGRFAM TIGR02867 spore_II_P: stage II sporulation protein P 179 383 2.3E-70 T 14-10-2018 IPR010897 Sporulation stage II, protein P DB29_00354 95b04f2054680a197ddc5dbf245f9950 392 Pfam PF07454 Stage II sporulation protein P (SpoIIP) 97 380 8.0E-71 T 14-10-2018 IPR010897 Sporulation stage II, protein P DB29_01983 72e27e82d0703d7b4cf3be25dec6bf76 294 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 20 285 7.4E-83 T 14-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 DB29_01983 72e27e82d0703d7b4cf3be25dec6bf76 294 Pfam PF00398 Ribosomal RNA adenine dimethylase 20 283 2.2E-67 T 14-10-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm DB29_01983 72e27e82d0703d7b4cf3be25dec6bf76 294 Gene3D G3DSA:1.10.8.100 220 290 4.6E-21 T 14-10-2018 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201|Reactome: R-HSA-6793080 DB29_01983 72e27e82d0703d7b4cf3be25dec6bf76 294 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 20 287 55.374 T 14-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 DB29_01983 72e27e82d0703d7b4cf3be25dec6bf76 294 SMART SM00650 36 212 6.3E-84 T 14-10-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 DB29_01983 72e27e82d0703d7b4cf3be25dec6bf76 294 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 52 79 - T 14-10-2018 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 DB29_01983 72e27e82d0703d7b4cf3be25dec6bf76 294 SUPERFAMILY SSF53335 16 288 1.29E-73 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DB29_01983 72e27e82d0703d7b4cf3be25dec6bf76 294 Gene3D G3DSA:3.40.50.150 2 216 1.4E-72 T 14-10-2018 DB29_02139 b16d1f15733be160a70641331ed9c239 329 SUPERFAMILY SSF53850 28 319 1.78E-61 T 14-10-2018 DB29_02139 b16d1f15733be160a70641331ed9c239 329 Pfam PF16868 NMT1-like family 30 318 9.8E-114 T 14-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family DB29_02139 b16d1f15733be160a70641331ed9c239 329 TIGRFAM TIGR02122 TRAP_TAXI: TRAP transporter solute receptor, TAXI family 1 318 1.6E-90 T 14-10-2018 IPR011852 TRAP transporter solute receptor, TAXI family DB29_02139 b16d1f15733be160a70641331ed9c239 329 Gene3D G3DSA:3.40.190.10 116 255 1.0E-86 T 14-10-2018 DB29_02139 b16d1f15733be160a70641331ed9c239 329 Gene3D G3DSA:3.40.190.10 30 318 1.0E-86 T 14-10-2018 DB29_03814 fdd7b0f568b7dd2685ba59e604920035 80 ProDom PD058321 YQZF GSC13 TRANSMEMBRANE IG GKC13 MEMBRANE PROTEINS BH2767 RBL05544 SIMILAR 1 77 3.0E-26 T 14-10-2018 IPR020138 Uncharacterised protein family YqzF DB29_03814 fdd7b0f568b7dd2685ba59e604920035 80 Pfam PF11118 Protein of unknown function (DUF2627) 3 76 4.7E-34 T 14-10-2018 IPR020138 Uncharacterised protein family YqzF DB29_01843 38d075abb8bc5906c8ea853f350ccaa0 291 Gene3D G3DSA:3.90.1200.10 97 291 1.2E-57 T 14-10-2018 DB29_01843 38d075abb8bc5906c8ea853f350ccaa0 291 Pfam PF01636 Phosphotransferase enzyme family 27 245 6.8E-22 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase DB29_01843 38d075abb8bc5906c8ea853f350ccaa0 291 Gene3D G3DSA:3.30.200.20 2 96 3.7E-24 T 14-10-2018 DB29_01843 38d075abb8bc5906c8ea853f350ccaa0 291 SUPERFAMILY SSF56112 1 263 3.99E-36 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily DB29_02909 3fe1866ca0b4b8fc049b6407c8b5b5c8 886 Gene3D G3DSA:2.70.150.10 17 228 7.0E-288 T 14-10-2018 DB29_02909 3fe1866ca0b4b8fc049b6407c8b5b5c8 886 SUPERFAMILY SSF81665 4 878 1.7E-120 T 14-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 DB29_02909 3fe1866ca0b4b8fc049b6407c8b5b5c8 886 SUPERFAMILY SSF81653 117 223 1.7E-30 T 14-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 DB29_02909 3fe1866ca0b4b8fc049b6407c8b5b5c8 886 Gene3D G3DSA:3.40.50.1000 323 666 7.0E-288 T 14-10-2018 IPR023214 HAD superfamily DB29_02909 3fe1866ca0b4b8fc049b6407c8b5b5c8 886 Pfam PF00702 haloacid dehalogenase-like hydrolase 323 635 3.5E-19 T 14-10-2018 DB29_02909 3fe1866ca0b4b8fc049b6407c8b5b5c8 886 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 84 345 7.2E-38 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 DB29_02909 3fe1866ca0b4b8fc049b6407c8b5b5c8 886 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 589 712 5.3E-32 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 DB29_02909 3fe1866ca0b4b8fc049b6407c8b5b5c8 886 Pfam PF00122 E1-E2 ATPase 116 306 1.1E-51 T 14-10-2018 DB29_02909 3fe1866ca0b4b8fc049b6407c8b5b5c8 886 Gene3D G3DSA:3.40.1110.10 336 527 7.0E-288 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 DB29_02909 3fe1866ca0b4b8fc049b6407c8b5b5c8 886 Pfam PF00690 Cation transporter/ATPase, N-terminus 5 72 2.2E-18 T 14-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 DB29_02909 3fe1866ca0b4b8fc049b6407c8b5b5c8 886 Gene3D G3DSA:1.20.1110.10 56 875 7.0E-288 T 14-10-2018 DB29_02909 3fe1866ca0b4b8fc049b6407c8b5b5c8 886 Pfam PF00689 Cation transporting ATPase, C-terminus 706 877 1.3E-44 T 14-10-2018 IPR006068 Cation-transporting P-type ATPase, C-terminal Reactome: R-HSA-936837 DB29_02909 3fe1866ca0b4b8fc049b6407c8b5b5c8 886 SUPERFAMILY SSF81660 333 524 2.83E-43 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 DB29_02909 3fe1866ca0b4b8fc049b6407c8b5b5c8 886 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 328 334 - T 14-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 DB29_02909 3fe1866ca0b4b8fc049b6407c8b5b5c8 886 SUPERFAMILY SSF56784 324 723 1.26E-60 T 14-10-2018 IPR036412 HAD-like superfamily DB29_02909 3fe1866ca0b4b8fc049b6407c8b5b5c8 886 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 326 340 5.2E-38 T 14-10-2018 DB29_02909 3fe1866ca0b4b8fc049b6407c8b5b5c8 886 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 542 552 5.2E-38 T 14-10-2018 DB29_02909 3fe1866ca0b4b8fc049b6407c8b5b5c8 886 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 163 177 5.2E-38 T 14-10-2018 DB29_02909 3fe1866ca0b4b8fc049b6407c8b5b5c8 886 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 621 640 5.2E-38 T 14-10-2018 DB29_02909 3fe1866ca0b4b8fc049b6407c8b5b5c8 886 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 645 657 5.2E-38 T 14-10-2018 DB29_02909 3fe1866ca0b4b8fc049b6407c8b5b5c8 886 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 520 531 5.2E-38 T 14-10-2018 DB29_02909 3fe1866ca0b4b8fc049b6407c8b5b5c8 886 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 653 678 7.2E-11 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 DB29_02909 3fe1866ca0b4b8fc049b6407c8b5b5c8 886 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 593 609 7.2E-11 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 DB29_02909 3fe1866ca0b4b8fc049b6407c8b5b5c8 886 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 621 637 7.2E-11 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 DB29_02909 3fe1866ca0b4b8fc049b6407c8b5b5c8 886 SMART SM00831 4 78 2.9E-33 T 14-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 DB29_01686 54e1e421b596c8867a7eb0292ed5df72 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 3.4E-30 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_01686 54e1e421b596c8867a7eb0292ed5df72 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 3.4E-30 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_01686 54e1e421b596c8867a7eb0292ed5df72 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 3.4E-30 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_01686 54e1e421b596c8867a7eb0292ed5df72 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 223 243 3.4E-30 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_01686 54e1e421b596c8867a7eb0292ed5df72 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 3.4E-30 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_01686 54e1e421b596c8867a7eb0292ed5df72 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 3.4E-30 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_01686 54e1e421b596c8867a7eb0292ed5df72 263 Gene3D G3DSA:3.40.50.720 1 262 3.0E-68 T 14-10-2018 DB29_01686 54e1e421b596c8867a7eb0292ed5df72 263 SUPERFAMILY SSF51735 6 259 5.5E-70 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_01686 54e1e421b596c8867a7eb0292ed5df72 263 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 259 2.5E-52 T 14-10-2018 DB29_01686 54e1e421b596c8867a7eb0292ed5df72 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 6.8E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_01686 54e1e421b596c8867a7eb0292ed5df72 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 6.8E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_01686 54e1e421b596c8867a7eb0292ed5df72 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 85 96 6.8E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_02094 928cdcbdb2d19f4da4c0674afcef829f 445 Gene3D G3DSA:3.40.980.20 254 443 2.3E-40 T 14-10-2018 DB29_02094 928cdcbdb2d19f4da4c0674afcef829f 445 SUPERFAMILY SSF142764 6 441 1.27E-93 T 14-10-2018 DB29_02094 928cdcbdb2d19f4da4c0674afcef829f 445 Pfam PF17042 Putative nucleotide-binding of sugar-metabolising enzyme 268 436 1.9E-33 T 14-10-2018 IPR031475 Four-carbon acid sugar kinase, C-terminal domain DB29_02094 928cdcbdb2d19f4da4c0674afcef829f 445 Gene3D G3DSA:3.40.50.10840 3 253 1.4E-67 T 14-10-2018 IPR037051 Four-carbon acid sugar kinase, N-terminal domain superfamily DB29_02094 928cdcbdb2d19f4da4c0674afcef829f 445 Pfam PF07005 Putative sugar-binding N-terminal domain 6 241 8.7E-52 T 14-10-2018 IPR010737 Four-carbon acid sugar kinase, N-terminal domain DB29_01292 a07f261a8fde57250d2d4503e5179471 189 Pfam PF02613 Nitrate reductase delta subunit 56 167 8.6E-6 T 14-10-2018 IPR020945 DMSO/Nitrate reductase chaperone DB29_01292 a07f261a8fde57250d2d4503e5179471 189 TIGRFAM TIGR00684 narJ: nitrate reductase molybdenum cofactor assembly chaperone 44 172 5.5E-21 T 14-10-2018 IPR003765 Nitrate reductase chaperone, NarJ GO:0051082|GO:0051131 DB29_01292 a07f261a8fde57250d2d4503e5179471 189 SUPERFAMILY SSF89155 14 179 7.46E-23 T 14-10-2018 IPR036411 TorD-like superfamily DB29_02731 f739331bf54e565c83643fa0ed1f2495 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 2.0E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_02731 f739331bf54e565c83643fa0ed1f2495 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 2.0E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_02731 f739331bf54e565c83643fa0ed1f2495 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 2.0E-15 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_02731 f739331bf54e565c83643fa0ed1f2495 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 4.1E-46 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_02731 f739331bf54e565c83643fa0ed1f2495 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 4.1E-46 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_02731 f739331bf54e565c83643fa0ed1f2495 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 4.1E-46 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_02731 f739331bf54e565c83643fa0ed1f2495 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 4.1E-46 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_02731 f739331bf54e565c83643fa0ed1f2495 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 209 229 4.1E-46 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_02731 f739331bf54e565c83643fa0ed1f2495 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 4.1E-46 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_02731 f739331bf54e565c83643fa0ed1f2495 248 Gene3D G3DSA:3.40.50.720 1 246 4.0E-82 T 14-10-2018 DB29_02731 f739331bf54e565c83643fa0ed1f2495 248 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 244 3.0E-65 T 14-10-2018 DB29_02731 f739331bf54e565c83643fa0ed1f2495 248 SUPERFAMILY SSF51735 5 247 2.52E-84 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_02731 f739331bf54e565c83643fa0ed1f2495 248 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 192 3.2E-4 T 14-10-2018 DB29_02731 f739331bf54e565c83643fa0ed1f2495 248 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 DB29_03820 61a12218a151b377d6003d1ec6d9ca89 418 Gene3D G3DSA:4.10.320.10 105 153 1.8E-18 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 DB29_03820 61a12218a151b377d6003d1ec6d9ca89 418 Gene3D G3DSA:2.40.50.100 1 101 1.8E-26 T 14-10-2018 DB29_03820 61a12218a151b377d6003d1ec6d9ca89 418 Pfam PF02817 e3 binding domain 115 148 8.2E-14 T 14-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 DB29_03820 61a12218a151b377d6003d1ec6d9ca89 418 SUPERFAMILY SSF47005 107 152 2.49E-12 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 DB29_03820 61a12218a151b377d6003d1ec6d9ca89 418 Gene3D G3DSA:3.30.559.10 167 418 7.4E-93 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 DB29_03820 61a12218a151b377d6003d1ec6d9ca89 418 SUPERFAMILY SSF52777 174 410 1.29E-79 T 14-10-2018 DB29_03820 61a12218a151b377d6003d1ec6d9ca89 418 SUPERFAMILY SSF51230 3 91 1.02E-23 T 14-10-2018 IPR011053 Single hybrid motif DB29_03820 61a12218a151b377d6003d1ec6d9ca89 418 Pfam PF00364 Biotin-requiring enzyme 4 76 6.6E-20 T 14-10-2018 IPR000089 Biotin/lipoyl attachment DB29_03820 61a12218a151b377d6003d1ec6d9ca89 418 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 183 411 8.7E-78 T 14-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 DB29_03632 a99b35079c8e0bc5f0352152a6b69aae 880 SUPERFAMILY SSF50677 196 346 9.16E-65 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 DB29_03632 a99b35079c8e0bc5f0352152a6b69aae 880 Pfam PF08264 Anticodon-binding domain of tRNA 608 755 2.3E-44 T 14-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 DB29_03632 a99b35079c8e0bc5f0352152a6b69aae 880 SUPERFAMILY SSF47323 576 829 1.27E-74 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 DB29_03632 a99b35079c8e0bc5f0352152a6b69aae 880 Gene3D G3DSA:3.40.50.620 27 526 0.0 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DB29_03632 a99b35079c8e0bc5f0352152a6b69aae 880 Gene3D G3DSA:1.10.730.10 7 741 0.0 T 14-10-2018 DB29_03632 a99b35079c8e0bc5f0352152a6b69aae 880 Gene3D G3DSA:3.90.740.10 180 346 0.0 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 DB29_03632 a99b35079c8e0bc5f0352152a6b69aae 880 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 19 564 2.0E-220 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 DB29_03632 a99b35079c8e0bc5f0352152a6b69aae 880 Gene3D G3DSA:1.10.287.380 807 879 8.3E-24 T 14-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 DB29_03632 a99b35079c8e0bc5f0352152a6b69aae 880 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 814 879 8.4E-23 T 14-10-2018 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9 DB29_03632 a99b35079c8e0bc5f0352152a6b69aae 880 Hamap MF_02004 Valine--tRNA ligase [valS]. 7 879 16.074 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 DB29_03632 a99b35079c8e0bc5f0352152a6b69aae 880 SUPERFAMILY SSF52374 5 575 1.06E-146 T 14-10-2018 DB29_03632 a99b35079c8e0bc5f0352152a6b69aae 880 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 48 59 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 DB29_03632 a99b35079c8e0bc5f0352152a6b69aae 880 SUPERFAMILY SSF46589 814 878 4.97E-17 T 14-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 DB29_03632 a99b35079c8e0bc5f0352152a6b69aae 880 TIGRFAM TIGR00422 valS: valine--tRNA ligase 7 861 0.0 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 DB29_03632 a99b35079c8e0bc5f0352152a6b69aae 880 PRINTS PR00986 Valyl-tRNA synthetase signature 41 52 7.4E-39 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 DB29_03632 a99b35079c8e0bc5f0352152a6b69aae 880 PRINTS PR00986 Valyl-tRNA synthetase signature 477 495 7.4E-39 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 DB29_03632 a99b35079c8e0bc5f0352152a6b69aae 880 PRINTS PR00986 Valyl-tRNA synthetase signature 445 466 7.4E-39 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 DB29_03632 a99b35079c8e0bc5f0352152a6b69aae 880 PRINTS PR00986 Valyl-tRNA synthetase signature 235 252 7.4E-39 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 DB29_03632 a99b35079c8e0bc5f0352152a6b69aae 880 PRINTS PR00986 Valyl-tRNA synthetase signature 350 363 7.4E-39 T 14-10-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 DB29_02391 1d121e8b46876ce8e848858497b72142 283 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 3 162 4.4E-40 T 14-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 DB29_02391 1d121e8b46876ce8e848858497b72142 283 Gene3D G3DSA:3.40.50.720 1 162 2.9E-48 T 14-10-2018 DB29_02391 1d121e8b46876ce8e848858497b72142 283 SUPERFAMILY SSF51735 3 163 1.89E-41 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_02391 1d121e8b46876ce8e848858497b72142 283 Gene3D G3DSA:1.10.1040.10 163 283 8.9E-30 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 DB29_02391 1d121e8b46876ce8e848858497b72142 283 PIRSF PIRSF000103 1 283 7.9E-67 T 14-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 DB29_02391 1d121e8b46876ce8e848858497b72142 283 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 165 283 9.1E-25 T 14-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 DB29_02391 1d121e8b46876ce8e848858497b72142 283 SUPERFAMILY SSF48179 163 283 3.23E-28 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 DB29_04317 5e0493eb5aaed7f0c8946dfd35e4478b 312 Hamap MF_01818 Ribonuclease BN [rbn]. 1 303 38.974 T 14-10-2018 IPR013471 Ribonuclease Z/BN GO:0016891|GO:0042779 DB29_04317 5e0493eb5aaed7f0c8946dfd35e4478b 312 Pfam PF12706 Beta-lactamase superfamily domain 201 269 4.7E-8 T 14-10-2018 IPR001279 Metallo-beta-lactamase DB29_04317 5e0493eb5aaed7f0c8946dfd35e4478b 312 TIGRFAM TIGR02651 RNase_Z: ribonuclease Z 2 302 2.1E-106 T 14-10-2018 IPR013471 Ribonuclease Z/BN GO:0016891|GO:0042779 DB29_04317 5e0493eb5aaed7f0c8946dfd35e4478b 312 SMART SM00849 18 247 0.0088 T 14-10-2018 IPR001279 Metallo-beta-lactamase DB29_04317 5e0493eb5aaed7f0c8946dfd35e4478b 312 Pfam PF00753 Metallo-beta-lactamase superfamily 26 119 1.6E-9 T 14-10-2018 IPR001279 Metallo-beta-lactamase DB29_04317 5e0493eb5aaed7f0c8946dfd35e4478b 312 Gene3D G3DSA:3.60.15.10 1 303 4.4E-102 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DB29_04317 5e0493eb5aaed7f0c8946dfd35e4478b 312 SUPERFAMILY SSF56281 1 303 1.78E-83 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DB29_00046 94c6b34c4fd7f80ad2ae1a97f3f14be1 200 Hamap MF_00527 Putative 3-methyladenine DNA glycosylase. 9 196 30.373 T 14-10-2018 IPR003180 Methylpurine-DNA glycosylase GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 DB29_00046 94c6b34c4fd7f80ad2ae1a97f3f14be1 200 TIGRFAM TIGR00567 3mg: DNA-3-methyladenine glycosylase 7 196 2.2E-61 T 14-10-2018 IPR003180 Methylpurine-DNA glycosylase GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 DB29_00046 94c6b34c4fd7f80ad2ae1a97f3f14be1 200 Pfam PF02245 Methylpurine-DNA glycosylase (MPG) 10 189 3.3E-57 T 14-10-2018 IPR003180 Methylpurine-DNA glycosylase GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 DB29_00046 94c6b34c4fd7f80ad2ae1a97f3f14be1 200 Gene3D G3DSA:3.10.300.10 2 200 6.8E-61 T 14-10-2018 IPR036995 Methylpurine-DNA glycosylase superfamily GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 DB29_00046 94c6b34c4fd7f80ad2ae1a97f3f14be1 200 SUPERFAMILY SSF50486 5 199 7.22E-63 T 14-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 DB29_00449 7a054e448d28306fdd2ae893a73de5b5 729 Gene3D G3DSA:3.10.20.30 382 457 1.3E-34 T 14-10-2018 IPR012675 Beta-grasp domain superfamily DB29_00449 7a054e448d28306fdd2ae893a73de5b5 729 Pfam PF02824 TGS domain 389 448 4.4E-23 T 14-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 DB29_00449 7a054e448d28306fdd2ae893a73de5b5 729 Pfam PF04607 Region found in RelA / SpoT proteins 234 344 7.8E-39 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 DB29_00449 7a054e448d28306fdd2ae893a73de5b5 729 SUPERFAMILY SSF55021 650 728 6.87E-11 T 14-10-2018 DB29_00449 7a054e448d28306fdd2ae893a73de5b5 729 SUPERFAMILY SSF81301 191 365 2.62E-65 T 14-10-2018 DB29_00449 7a054e448d28306fdd2ae893a73de5b5 729 SMART SM00471 40 152 4.6E-8 T 14-10-2018 IPR003607 HD/PDEase domain DB29_00449 7a054e448d28306fdd2ae893a73de5b5 729 Gene3D G3DSA:3.30.70.260 649 729 5.5E-18 T 14-10-2018 DB29_00449 7a054e448d28306fdd2ae893a73de5b5 729 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 25 726 4.0E-256 T 14-10-2018 IPR004811 RelA/SpoT family GO:0015969 DB29_00449 7a054e448d28306fdd2ae893a73de5b5 729 Gene3D G3DSA:3.30.460.10 192 324 1.8E-53 T 14-10-2018 DB29_00449 7a054e448d28306fdd2ae893a73de5b5 729 SUPERFAMILY SSF81271 376 448 2.13E-24 T 14-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 DB29_00449 7a054e448d28306fdd2ae893a73de5b5 729 SUPERFAMILY SSF109604 3 189 1.57E-75 T 14-10-2018 DB29_00449 7a054e448d28306fdd2ae893a73de5b5 729 Pfam PF13328 HD domain 25 174 3.8E-51 T 14-10-2018 IPR003607 HD/PDEase domain DB29_00449 7a054e448d28306fdd2ae893a73de5b5 729 Pfam PF13291 ACT domain 648 726 3.3E-20 T 14-10-2018 IPR002912 ACT domain DB29_00449 7a054e448d28306fdd2ae893a73de5b5 729 SMART SM00954 234 344 3.1E-69 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 DB29_00449 7a054e448d28306fdd2ae893a73de5b5 729 Gene3D G3DSA:1.10.3210.10 1 190 1.7E-84 T 14-10-2018 DB29_03940 ead114d032f3852c4ed943ca89015a81 1062 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1057 13.208 T 14-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DB29_03940 ead114d032f3852c4ed943ca89015a81 1062 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 702 716 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 DB29_03940 ead114d032f3852c4ed943ca89015a81 1062 SMART SM00851 949 1036 2.6E-32 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain DB29_03940 ead114d032f3852c4ed943ca89015a81 1062 Gene3D G3DSA:3.40.50.1380 930 1058 4.7E-39 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily DB29_03940 ead114d032f3852c4ed943ca89015a81 1062 Gene3D G3DSA:3.40.50.20 547 655 2.1E-45 T 14-10-2018 DB29_03940 ead114d032f3852c4ed943ca89015a81 1062 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1047 0.0 T 14-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DB29_03940 ead114d032f3852c4ed943ca89015a81 1062 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 8.2E-63 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DB29_03940 ead114d032f3852c4ed943ca89015a81 1062 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 8.2E-63 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DB29_03940 ead114d032f3852c4ed943ca89015a81 1062 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 8.2E-63 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DB29_03940 ead114d032f3852c4ed943ca89015a81 1062 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 378 396 8.2E-63 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DB29_03940 ead114d032f3852c4ed943ca89015a81 1062 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 296 325 8.2E-63 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DB29_03940 ead114d032f3852c4ed943ca89015a81 1062 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 8.2E-63 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DB29_03940 ead114d032f3852c4ed943ca89015a81 1062 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 8.2E-63 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DB29_03940 ead114d032f3852c4ed943ca89015a81 1062 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 296 303 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 DB29_03940 ead114d032f3852c4ed943ca89015a81 1062 Gene3D G3DSA:3.40.50.20 1 116 1.5E-49 T 14-10-2018 DB29_03940 ead114d032f3852c4ed943ca89015a81 1062 SUPERFAMILY SSF48108 395 546 3.27E-46 T 14-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DB29_03940 ead114d032f3852c4ed943ca89015a81 1062 Gene3D G3DSA:3.30.470.20 120 401 3.5E-126 T 14-10-2018 DB29_03940 ead114d032f3852c4ed943ca89015a81 1062 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 830 837 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 DB29_03940 ead114d032f3852c4ed943ca89015a81 1062 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 164 178 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 DB29_03940 ead114d032f3852c4ed943ca89015a81 1062 Gene3D G3DSA:3.30.470.20 659 929 4.4E-109 T 14-10-2018 DB29_03940 ead114d032f3852c4ed943ca89015a81 1062 SUPERFAMILY SSF56059 128 399 1.06E-108 T 14-10-2018 DB29_03940 ead114d032f3852c4ed943ca89015a81 1062 Pfam PF02142 MGS-like domain 951 1036 1.5E-21 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain DB29_03940 ead114d032f3852c4ed943ca89015a81 1062 SMART SM01096 420 540 4.9E-63 T 14-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DB29_03940 ead114d032f3852c4ed943ca89015a81 1062 SUPERFAMILY SSF56059 666 927 3.01E-102 T 14-10-2018 DB29_03940 ead114d032f3852c4ed943ca89015a81 1062 SUPERFAMILY SSF52440 549 668 3.45E-47 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily DB29_03940 ead114d032f3852c4ed943ca89015a81 1062 SUPERFAMILY SSF52335 929 1052 4.45E-35 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily DB29_03940 ead114d032f3852c4ed943ca89015a81 1062 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 423 540 2.1E-38 T 14-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DB29_03940 ead114d032f3852c4ed943ca89015a81 1062 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1061 13.444 T 14-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DB29_03940 ead114d032f3852c4ed943ca89015a81 1062 SUPERFAMILY SSF52440 1 127 7.34E-50 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily DB29_03940 ead114d032f3852c4ed943ca89015a81 1062 Gene3D G3DSA:1.10.1030.10 402 546 3.2E-45 T 14-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DB29_03940 ead114d032f3852c4ed943ca89015a81 1062 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 666 867 9.1E-39 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 DB29_03940 ead114d032f3852c4ed943ca89015a81 1062 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 333 5.4E-81 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 DB29_02019 115648b6f39ff8c31ed2a97d6b3ff19b 105 Pfam PF02575 YbaB/EbfC DNA-binding family 10 100 2.2E-33 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family DB29_02019 115648b6f39ff8c31ed2a97d6b3ff19b 105 PIRSF PIRSF004555 2 105 6.7E-37 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family DB29_02019 115648b6f39ff8c31ed2a97d6b3ff19b 105 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 3 104 8.1E-30 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family DB29_02019 115648b6f39ff8c31ed2a97d6b3ff19b 105 SUPERFAMILY SSF82607 10 104 4.84E-33 T 14-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily DB29_02019 115648b6f39ff8c31ed2a97d6b3ff19b 105 Gene3D G3DSA:3.30.1310.10 6 105 4.5E-37 T 14-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily DB29_02019 115648b6f39ff8c31ed2a97d6b3ff19b 105 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 4 98 22.403 T 14-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family DB29_02131 c6303e366cedcc4b3567166f4477af05 669 Gene3D G3DSA:1.10.8.500 304 358 4.0E-12 T 14-10-2018 DB29_02131 c6303e366cedcc4b3567166f4477af05 669 Gene3D G3DSA:3.30.450.20 61 273 4.5E-39 T 14-10-2018 DB29_02131 c6303e366cedcc4b3567166f4477af05 669 Gene3D G3DSA:1.10.287.950 360 663 1.2E-65 T 14-10-2018 DB29_02131 c6303e366cedcc4b3567166f4477af05 669 SUPERFAMILY SSF58104 329 662 2.88E-69 T 14-10-2018 DB29_02131 c6303e366cedcc4b3567166f4477af05 669 SMART SM00304 447 499 52.0 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DB29_02131 c6303e366cedcc4b3567166f4477af05 669 SMART SM00304 305 359 7.5E-14 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DB29_02131 c6303e366cedcc4b3567166f4477af05 669 Pfam PF00672 HAMP domain 305 354 5.5E-13 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DB29_02131 c6303e366cedcc4b3567166f4477af05 669 SUPERFAMILY SSF103190 96 193 2.04E-11 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily DB29_02131 c6303e366cedcc4b3567166f4477af05 669 Pfam PF02743 Cache domain 50 267 5.2E-28 T 14-10-2018 IPR033479 Double Cache domain 1 DB29_02131 c6303e366cedcc4b3567166f4477af05 669 SMART SM00283 388 663 1.1E-77 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DB29_02131 c6303e366cedcc4b3567166f4477af05 669 Gene3D G3DSA:3.30.450.20 72 184 4.5E-39 T 14-10-2018 DB29_02131 c6303e366cedcc4b3567166f4477af05 669 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 434 613 2.0E-38 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DB29_02492 82eb051796b2c28fce0aa1cca70c0599 332 Gene3D G3DSA:3.40.190.10 119 219 5.4E-85 T 14-10-2018 DB29_02492 82eb051796b2c28fce0aa1cca70c0599 332 Gene3D G3DSA:1.10.8.450 251 283 5.4E-85 T 14-10-2018 DB29_02492 82eb051796b2c28fce0aa1cca70c0599 332 TIGRFAM TIGR01728 SsuA_fam: ABC transporter, substrate-binding protein, aliphatic sulfonates family 38 320 8.1E-64 T 14-10-2018 IPR010067 Aliphatic sulfonates-binding protein GO:0016020|GO:0042626 DB29_02492 82eb051796b2c28fce0aa1cca70c0599 332 SUPERFAMILY SSF53850 36 265 1.39E-44 T 14-10-2018 DB29_02492 82eb051796b2c28fce0aa1cca70c0599 332 Pfam PF09084 NMT1/THI5 like 62 259 6.5E-21 T 14-10-2018 IPR015168 SsuA/THI5-like DB29_02492 82eb051796b2c28fce0aa1cca70c0599 332 Gene3D G3DSA:3.40.190.10 38 316 5.4E-85 T 14-10-2018 DB29_02492 82eb051796b2c28fce0aa1cca70c0599 332 SMART SM00062 37 256 1.6E-10 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DB29_00383 a5c9da2e9f78d6070a0e3ffd97236320 553 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 13 493 1.9E-180 T 14-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 DB29_00383 a5c9da2e9f78d6070a0e3ffd97236320 553 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 51 493 5.4E-150 T 14-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 DB29_00383 a5c9da2e9f78d6070a0e3ffd97236320 553 ProSitePatterns PS01303 BCCT family of transporters signature. 314 323 - T 14-10-2018 IPR018093 BCCT transporter, conserved site DB29_03558 00a8303062332501c8cb486b8670523f 435 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 39 267 1.1E-10 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain DB29_03558 00a8303062332501c8cb486b8670523f 435 Gene3D G3DSA:2.40.30.170 42 313 4.2E-35 T 14-10-2018 DB29_03558 00a8303062332501c8cb486b8670523f 435 Gene3D G3DSA:1.10.287.470 87 188 4.2E-35 T 14-10-2018 DB29_03558 00a8303062332501c8cb486b8670523f 435 Gene3D G3DSA:2.40.50.100 53 227 4.2E-35 T 14-10-2018 DB29_03558 00a8303062332501c8cb486b8670523f 435 Gene3D G3DSA:2.40.420.20 314 370 4.2E-35 T 14-10-2018 DB29_02932 8c534c9d456af3d560e3d1e51c2b2f30 94 SUPERFAMILY SSF52794 1 92 3.01E-20 T 14-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 DB29_02932 8c534c9d456af3d560e3d1e51c2b2f30 94 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 5 86 5.3E-14 T 14-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 DB29_02932 8c534c9d456af3d560e3d1e51c2b2f30 94 Gene3D G3DSA:3.40.50.2300 3 94 4.3E-28 T 14-10-2018 DB29_04308 f55ddc9bbc70a166aa4f682165ad3db5 944 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 95 646 3.4E-170 T 14-10-2018 DB29_04308 f55ddc9bbc70a166aa4f682165ad3db5 944 SUPERFAMILY SSF56601 243 699 7.09E-103 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like DB29_04308 f55ddc9bbc70a166aa4f682165ad3db5 944 Gene3D G3DSA:2.60.40.10 697 790 6.6E-8 T 14-10-2018 IPR013783 Immunoglobulin-like fold DB29_04308 f55ddc9bbc70a166aa4f682165ad3db5 944 SUPERFAMILY SSF53955 72 284 1.43E-70 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily DB29_04308 f55ddc9bbc70a166aa4f682165ad3db5 944 SMART SM00060 702 777 1.2E-4 T 14-10-2018 IPR003961 Fibronectin type III GO:0005515 DB29_04308 f55ddc9bbc70a166aa4f682165ad3db5 944 Gene3D G3DSA:3.90.1310.20 79 541 2.0E-193 T 14-10-2018 DB29_04308 f55ddc9bbc70a166aa4f682165ad3db5 944 Pfam PF00041 Fibronectin type III domain 703 780 1.4E-5 T 14-10-2018 IPR003961 Fibronectin type III GO:0005515 DB29_04308 f55ddc9bbc70a166aa4f682165ad3db5 944 Gene3D G3DSA:3.40.710.10 328 657 2.0E-193 T 14-10-2018 DB29_04308 f55ddc9bbc70a166aa4f682165ad3db5 944 Pfam PF00905 Penicillin binding protein transpeptidase domain 358 641 1.0E-32 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 DB29_04308 f55ddc9bbc70a166aa4f682165ad3db5 944 SUPERFAMILY SSF49265 702 786 2.27E-8 T 14-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 DB29_04308 f55ddc9bbc70a166aa4f682165ad3db5 944 Pfam PF00912 Transglycosylase 87 261 5.9E-61 T 14-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DB29_04308 f55ddc9bbc70a166aa4f682165ad3db5 944 Gene3D G3DSA:1.10.3810.10 95 287 2.0E-193 T 14-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DB29_02874 af5de48b86121a2c26ebebd853a5b043 199 Pfam PF02630 SCO1/SenC 39 181 2.7E-29 T 14-10-2018 IPR003782 Copper chaperone SCO1/SenC Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DB29_02874 af5de48b86121a2c26ebebd853a5b043 199 Gene3D G3DSA:3.40.30.10 36 198 2.4E-47 T 14-10-2018 DB29_02874 af5de48b86121a2c26ebebd853a5b043 199 SUPERFAMILY SSF52833 41 198 1.23E-39 T 14-10-2018 IPR036249 Thioredoxin-like superfamily DB29_00924 e2c866439c931f9d686fd9db2f6059e8 582 Pfam PF01979 Amidohydrolase family 80 363 1.5E-16 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 DB29_00924 e2c866439c931f9d686fd9db2f6059e8 582 Gene3D G3DSA:3.20.20.140 84 326 2.4E-85 T 14-10-2018 DB29_00924 e2c866439c931f9d686fd9db2f6059e8 582 Pfam PF13382 Adenine deaminase C-terminal domain 422 573 4.1E-33 T 14-10-2018 IPR026912 Adenine deaminase C-terminal domain KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 DB29_00924 e2c866439c931f9d686fd9db2f6059e8 582 SUPERFAMILY SSF51338 24 370 1.06E-14 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DB29_00924 e2c866439c931f9d686fd9db2f6059e8 582 Gene3D G3DSA:2.30.40.10 21 363 2.4E-85 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DB29_00924 e2c866439c931f9d686fd9db2f6059e8 582 SUPERFAMILY SSF51556 84 330 1.8E-11 T 14-10-2018 IPR032466 Metal-dependent hydrolase DB29_03719 2b1f40163c367d148dcd703251705cd0 253 SUPERFAMILY SSF81301 18 209 2.94E-57 T 14-10-2018 DB29_03719 2b1f40163c367d148dcd703251705cd0 253 Gene3D G3DSA:1.10.287.860 163 226 7.8E-20 T 14-10-2018 DB29_03719 2b1f40163c367d148dcd703251705cd0 253 Pfam PF04607 Region found in RelA / SpoT proteins 57 178 1.1E-37 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 DB29_03719 2b1f40163c367d148dcd703251705cd0 253 SMART SM00954 57 180 7.8E-49 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 DB29_03719 2b1f40163c367d148dcd703251705cd0 253 Gene3D G3DSA:3.30.460.10 7 162 1.1E-52 T 14-10-2018 DB29_03260 7b8f1af205e628acde51c27232eab84f 165 SUPERFAMILY SSF55811 8 132 1.62E-23 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 DB29_03260 7b8f1af205e628acde51c27232eab84f 165 ProSitePatterns PS00893 Nudix box signature. 34 55 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 DB29_03260 7b8f1af205e628acde51c27232eab84f 165 PRINTS PR00502 NUDIX hydrolase family signature 43 58 2.9E-7 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 DB29_03260 7b8f1af205e628acde51c27232eab84f 165 PRINTS PR00502 NUDIX hydrolase family signature 29 43 2.9E-7 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 DB29_03260 7b8f1af205e628acde51c27232eab84f 165 Pfam PF00293 NUDIX domain 7 124 1.2E-15 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 DB29_03260 7b8f1af205e628acde51c27232eab84f 165 Gene3D G3DSA:3.90.79.10 3 157 7.1E-39 T 14-10-2018 DB29_00682 3f0da5d68f4c830ff63fd0ed7f590d67 471 Pfam PF01938 TRAM domain 21 74 1.3E-7 T 14-10-2018 IPR002792 TRAM domain DB29_00682 3f0da5d68f4c830ff63fd0ed7f590d67 471 Gene3D G3DSA:2.40.50.140 11 95 2.9E-22 T 14-10-2018 DB29_00682 3f0da5d68f4c830ff63fd0ed7f590d67 471 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 392 465 5.0E-12 T 14-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 DB29_00682 3f0da5d68f4c830ff63fd0ed7f590d67 471 Gene3D G3DSA:3.40.1350.30 146 302 1.7E-110 T 14-10-2018 DB29_00682 3f0da5d68f4c830ff63fd0ed7f590d67 471 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 400 431 - T 14-10-2018 IPR030390 RNA methyltransferase TrmA, active site DB29_00682 3f0da5d68f4c830ff63fd0ed7f590d67 471 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 33 463 4.8E-161 T 14-10-2018 DB29_00682 3f0da5d68f4c830ff63fd0ed7f590d67 471 Gene3D G3DSA:3.40.50.150 97 465 1.7E-110 T 14-10-2018 DB29_00682 3f0da5d68f4c830ff63fd0ed7f590d67 471 SUPERFAMILY SSF53335 83 466 1.11E-77 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DB29_00682 3f0da5d68f4c830ff63fd0ed7f590d67 471 SUPERFAMILY SSF50249 15 75 8.0E-15 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DB29_03205 f0b07e9534bcfdebcf1387c1299b2253 199 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 4 27 3.9E-23 T 14-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 DB29_03205 f0b07e9534bcfdebcf1387c1299b2253 199 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 131 147 3.9E-23 T 14-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 DB29_03205 f0b07e9534bcfdebcf1387c1299b2253 199 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 80 100 3.9E-23 T 14-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 DB29_03205 f0b07e9534bcfdebcf1387c1299b2253 199 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 62 74 3.9E-23 T 14-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 DB29_03205 f0b07e9534bcfdebcf1387c1299b2253 199 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 159 171 3.9E-23 T 14-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 DB29_03205 f0b07e9534bcfdebcf1387c1299b2253 199 ProSitePatterns PS01333 Pyrrolidone-carboxylate peptidase glutamic acid active site. 69 85 - T 14-10-2018 IPR033693 Pyroglutamyl peptidase I, Glu active site MetaCyc: PWY-7942 DB29_03205 f0b07e9534bcfdebcf1387c1299b2253 199 SUPERFAMILY SSF53182 2 195 2.88E-55 T 14-10-2018 IPR036440 Peptidase C15, pyroglutamyl peptidase I-like superfamily MetaCyc: PWY-7942 DB29_03205 f0b07e9534bcfdebcf1387c1299b2253 199 PIRSF PIRSF015592 1 199 1.0E-63 T 14-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 DB29_03205 f0b07e9534bcfdebcf1387c1299b2253 199 Gene3D G3DSA:3.40.630.20 1 198 1.7E-61 T 14-10-2018 IPR036440 Peptidase C15, pyroglutamyl peptidase I-like superfamily MetaCyc: PWY-7942 DB29_03205 f0b07e9534bcfdebcf1387c1299b2253 199 Pfam PF01470 Pyroglutamyl peptidase 3 195 2.0E-57 T 14-10-2018 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like MetaCyc: PWY-7942 DB29_02849 49d6553ba0519e8a08da98ffaf7ab94b 302 Gene3D G3DSA:3.40.50.1980 127 299 1.0E-57 T 14-10-2018 DB29_02849 49d6553ba0519e8a08da98ffaf7ab94b 302 Gene3D G3DSA:3.40.50.1980 41 126 3.0E-30 T 14-10-2018 DB29_02849 49d6553ba0519e8a08da98ffaf7ab94b 302 Pfam PF01497 Periplasmic binding protein 45 273 1.5E-40 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain DB29_02849 49d6553ba0519e8a08da98ffaf7ab94b 302 SUPERFAMILY SSF53807 42 299 1.53E-54 T 14-10-2018 DB29_02849 49d6553ba0519e8a08da98ffaf7ab94b 302 TIGRFAM TIGR03659 IsdE: heme ABC transporter, heme-binding protein isdE 2 297 5.8E-128 T 14-10-2018 IPR019957 ABC transporter, high-affinity heme uptake system protein IsdE GO:0015886|GO:0016020|GO:0020037 DB29_02029 85c089223d50bbb41815cab8a52d3821 240 SUPERFAMILY SSF52540 1 235 2.18E-80 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_02029 85c089223d50bbb41815cab8a52d3821 240 SMART SM00382 26 213 8.4E-18 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_02029 85c089223d50bbb41815cab8a52d3821 240 PIRSF PIRSF039085 1 240 2.9E-118 T 14-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 DB29_02029 85c089223d50bbb41815cab8a52d3821 240 Gene3D G3DSA:3.40.50.300 1 240 7.3E-83 T 14-10-2018 DB29_02029 85c089223d50bbb41815cab8a52d3821 240 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB29_02029 85c089223d50bbb41815cab8a52d3821 240 Pfam PF00005 ABC transporter 17 165 4.0E-37 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB29_00483 85d4bf6d2a33e0537d94b66831308ec9 312 TIGRFAM TIGR00109 hemH: ferrochelatase 2 306 1.0E-89 T 14-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 DB29_00483 85d4bf6d2a33e0537d94b66831308ec9 312 SUPERFAMILY SSF53800 3 306 5.23E-87 T 14-10-2018 DB29_00483 85d4bf6d2a33e0537d94b66831308ec9 312 ProSitePatterns PS00534 Ferrochelatase signature. 176 194 - T 14-10-2018 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 DB29_00483 85d4bf6d2a33e0537d94b66831308ec9 312 Gene3D G3DSA:3.40.50.1400 148 287 5.0E-102 T 14-10-2018 DB29_00483 85d4bf6d2a33e0537d94b66831308ec9 312 Gene3D G3DSA:3.40.50.1400 8 302 5.0E-102 T 14-10-2018 DB29_00483 85d4bf6d2a33e0537d94b66831308ec9 312 Pfam PF00762 Ferrochelatase 5 305 6.0E-82 T 14-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 DB29_00483 85d4bf6d2a33e0537d94b66831308ec9 312 Hamap MF_00323 Ferrochelatase [hemH]. 4 306 32.182 T 14-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 DB29_02977 402eefc813a69da64510727d111c86d2 405 Gene3D G3DSA:3.40.190.10 24 327 3.3E-82 T 14-10-2018 DB29_02977 402eefc813a69da64510727d111c86d2 405 SUPERFAMILY SSF53850 5 397 1.25E-60 T 14-10-2018 DB29_02977 402eefc813a69da64510727d111c86d2 405 Gene3D G3DSA:3.40.190.10 122 387 3.3E-82 T 14-10-2018 DB29_02977 402eefc813a69da64510727d111c86d2 405 Pfam PF13416 Bacterial extracellular solute-binding protein 23 329 1.6E-26 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein DB29_01161 6377b2a5a20a0cad7d369d72e12de6c9 751 Gene3D G3DSA:3.40.50.300 466 750 9.2E-114 T 14-10-2018 DB29_01161 6377b2a5a20a0cad7d369d72e12de6c9 751 ProSitePatterns PS00211 ABC transporters family signature. 647 661 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB29_01161 6377b2a5a20a0cad7d369d72e12de6c9 751 SMART SM00382 28 417 14.0 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_01161 6377b2a5a20a0cad7d369d72e12de6c9 751 SMART SM00382 480 713 0.028 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_01161 6377b2a5a20a0cad7d369d72e12de6c9 751 SUPERFAMILY SSF52540 9 430 2.77E-31 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_01161 6377b2a5a20a0cad7d369d72e12de6c9 751 Pfam PF00005 ABC transporter 471 674 1.8E-12 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB29_01161 6377b2a5a20a0cad7d369d72e12de6c9 751 Gene3D G3DSA:3.40.50.300 11 441 1.8E-159 T 14-10-2018 DB29_01161 6377b2a5a20a0cad7d369d72e12de6c9 751 Gene3D G3DSA:1.20.1580.10 96 340 1.8E-159 T 14-10-2018 DB29_01161 6377b2a5a20a0cad7d369d72e12de6c9 751 Gene3D G3DSA:1.10.8.280 150 262 1.8E-159 T 14-10-2018 DB29_01161 6377b2a5a20a0cad7d369d72e12de6c9 751 SUPERFAMILY SSF52540 462 725 3.35E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_01161 6377b2a5a20a0cad7d369d72e12de6c9 751 Gene3D G3DSA:1.20.1580.10 548 586 9.2E-114 T 14-10-2018 DB29_00522 15c4f440eaf58f337ecc8c47dbcf30db 400 SUPERFAMILY SSF53383 3 391 1.65E-96 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DB29_00522 15c4f440eaf58f337ecc8c47dbcf30db 400 Gene3D G3DSA:3.90.1150.10 15 384 1.1E-123 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DB29_00522 15c4f440eaf58f337ecc8c47dbcf30db 400 Pfam PF00155 Aminotransferase class I and II 30 380 2.4E-40 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 DB29_00522 15c4f440eaf58f337ecc8c47dbcf30db 400 Gene3D G3DSA:3.40.640.10 63 283 1.1E-123 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DB29_02879 223c3b67178c8a9f6b8e474b1ee11141 256 SMART SM00382 35 211 9.2E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_02879 223c3b67178c8a9f6b8e474b1ee11141 256 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB29_02879 223c3b67178c8a9f6b8e474b1ee11141 256 Pfam PF00005 ABC transporter 26 161 3.3E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB29_02879 223c3b67178c8a9f6b8e474b1ee11141 256 Gene3D G3DSA:3.40.50.300 9 231 2.1E-61 T 14-10-2018 DB29_02879 223c3b67178c8a9f6b8e474b1ee11141 256 SUPERFAMILY SSF52540 11 226 8.42E-64 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_02837 d5326c64425ddcb64335ffd74fb3bafc 280 Pfam PF03466 LysR substrate binding domain 86 279 1.3E-39 T 14-10-2018 IPR005119 LysR, substrate-binding DB29_02837 d5326c64425ddcb64335ffd74fb3bafc 280 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.0E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DB29_02837 d5326c64425ddcb64335ffd74fb3bafc 280 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.0E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DB29_02837 d5326c64425ddcb64335ffd74fb3bafc 280 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.0E-5 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DB29_02837 d5326c64425ddcb64335ffd74fb3bafc 280 Gene3D G3DSA:3.40.190.290 89 280 3.4E-33 T 14-10-2018 DB29_02837 d5326c64425ddcb64335ffd74fb3bafc 280 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 1.4E-16 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DB29_02837 d5326c64425ddcb64335ffd74fb3bafc 280 SUPERFAMILY SSF53850 86 279 1.47E-36 T 14-10-2018 DB29_02837 d5326c64425ddcb64335ffd74fb3bafc 280 SUPERFAMILY SSF46785 2 109 3.4E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_02837 d5326c64425ddcb64335ffd74fb3bafc 280 Gene3D G3DSA:1.10.10.10 1 84 3.9E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_04310 a38a2025204b021ac3494d4c8ee58c9f 300 Pfam PF10720 Protein of unknown function (DUF2515) 7 270 3.9E-84 T 14-10-2018 IPR019658 Protein of unknown function DUF2515 DB29_02020 117050d6341cb906e3e34fa1c1eea7fa 560 Gene3D G3DSA:3.40.50.300 13 177 1.5E-105 T 14-10-2018 DB29_02020 117050d6341cb906e3e34fa1c1eea7fa 560 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 3 357 1.5E-142 T 14-10-2018 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 DB29_02020 117050d6341cb906e3e34fa1c1eea7fa 560 SMART SM00382 37 179 6.0E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_02020 117050d6341cb906e3e34fa1c1eea7fa 560 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 232 362 2.9E-15 T 14-10-2018 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 DB29_02020 117050d6341cb906e3e34fa1c1eea7fa 560 Gene3D G3DSA:1.10.8.60 8 238 1.5E-105 T 14-10-2018 DB29_02020 117050d6341cb906e3e34fa1c1eea7fa 560 SUPERFAMILY SSF48019 244 367 3.32E-27 T 14-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 DB29_02020 117050d6341cb906e3e34fa1c1eea7fa 560 Pfam PF13177 DNA polymerase III, delta subunit 20 178 2.2E-45 T 14-10-2018 DB29_02020 117050d6341cb906e3e34fa1c1eea7fa 560 Gene3D G3DSA:1.20.272.10 242 363 2.7E-10 T 14-10-2018 DB29_02020 117050d6341cb906e3e34fa1c1eea7fa 560 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 41 59 8.9E-6 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 DB29_02020 117050d6341cb906e3e34fa1c1eea7fa 560 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 124 142 8.9E-6 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 DB29_02020 117050d6341cb906e3e34fa1c1eea7fa 560 SUPERFAMILY SSF52540 31 222 1.27E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_03981 7e65a3e141b4f6dbe3e09ebe40f88fc1 452 SMART SM00382 100 302 3.1E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_03981 7e65a3e141b4f6dbe3e09ebe40f88fc1 452 TIGRFAM TIGR00959 ffh: signal recognition particle protein 3 429 1.4E-191 T 14-10-2018 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 DB29_03981 7e65a3e141b4f6dbe3e09ebe40f88fc1 452 Gene3D G3DSA:3.40.50.300 91 286 3.8E-130 T 14-10-2018 DB29_03981 7e65a3e141b4f6dbe3e09ebe40f88fc1 452 Gene3D G3DSA:1.10.260.30 328 449 1.7E-45 T 14-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 DB29_03981 7e65a3e141b4f6dbe3e09ebe40f88fc1 452 SUPERFAMILY SSF52540 43 355 1.33E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_03981 7e65a3e141b4f6dbe3e09ebe40f88fc1 452 SMART SM00962 101 297 7.5E-122 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 DB29_03981 7e65a3e141b4f6dbe3e09ebe40f88fc1 452 Pfam PF00448 SRP54-type protein, GTPase domain 101 297 2.0E-79 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 DB29_03981 7e65a3e141b4f6dbe3e09ebe40f88fc1 452 Pfam PF02978 Signal peptide binding domain 329 427 2.0E-34 T 14-10-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 DB29_03981 7e65a3e141b4f6dbe3e09ebe40f88fc1 452 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 270 283 - T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 DB29_03981 7e65a3e141b4f6dbe3e09ebe40f88fc1 452 SMART SM00963 2 87 6.4E-35 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 DB29_03981 7e65a3e141b4f6dbe3e09ebe40f88fc1 452 Gene3D G3DSA:1.20.120.140 6 307 3.8E-130 T 14-10-2018 DB29_03981 7e65a3e141b4f6dbe3e09ebe40f88fc1 452 Pfam PF02881 SRP54-type protein, helical bundle domain 6 83 3.2E-23 T 14-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 DB29_03981 7e65a3e141b4f6dbe3e09ebe40f88fc1 452 SUPERFAMILY SSF47446 328 430 1.96E-38 T 14-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 DB29_03981 7e65a3e141b4f6dbe3e09ebe40f88fc1 452 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 6 449 35.553 T 14-10-2018 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 Reactome: R-HSA-1799339 DB29_03259 f87f91c98eb621ffce638641619b3a03 316 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 7 305 4.3E-124 T 14-10-2018 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00450+1.8.1.9 DB29_03259 f87f91c98eb621ffce638641619b3a03 316 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 294 2.8E-51 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DB29_03259 f87f91c98eb621ffce638641619b3a03 316 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 135 155 - T 14-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 DB29_03259 f87f91c98eb621ffce638641619b3a03 316 Gene3D G3DSA:3.50.50.60 8 301 1.1E-116 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB29_03259 f87f91c98eb621ffce638641619b3a03 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 106 114 2.3E-71 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DB29_03259 f87f91c98eb621ffce638641619b3a03 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 234 255 2.3E-71 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DB29_03259 f87f91c98eb621ffce638641619b3a03 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 268 286 2.3E-71 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DB29_03259 f87f91c98eb621ffce638641619b3a03 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 8 30 2.3E-71 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DB29_03259 f87f91c98eb621ffce638641619b3a03 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 128 140 2.3E-71 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DB29_03259 f87f91c98eb621ffce638641619b3a03 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 195 211 2.3E-71 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DB29_03259 f87f91c98eb621ffce638641619b3a03 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 41 56 2.3E-71 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DB29_03259 f87f91c98eb621ffce638641619b3a03 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 143 167 2.3E-71 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DB29_03259 f87f91c98eb621ffce638641619b3a03 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 61 71 2.3E-71 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DB29_03259 f87f91c98eb621ffce638641619b3a03 316 Gene3D G3DSA:3.50.50.60 117 240 1.1E-116 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB29_03259 f87f91c98eb621ffce638641619b3a03 316 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 147 165 1.1E-38 T 14-10-2018 DB29_03259 f87f91c98eb621ffce638641619b3a03 316 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 1.1E-38 T 14-10-2018 DB29_03259 f87f91c98eb621ffce638641619b3a03 316 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 258 280 1.1E-38 T 14-10-2018 DB29_03259 f87f91c98eb621ffce638641619b3a03 316 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 105 123 1.1E-38 T 14-10-2018 DB29_03259 f87f91c98eb621ffce638641619b3a03 316 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 232 248 1.1E-38 T 14-10-2018 DB29_03259 f87f91c98eb621ffce638641619b3a03 316 SUPERFAMILY SSF51905 2 306 8.1E-59 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB29_03394 b332a576a63192e3b88f8906beaa1111 378 SUPERFAMILY SSF52540 72 357 6.97E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_03394 b332a576a63192e3b88f8906beaa1111 378 SMART SM00487 22 219 2.9E-44 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DB29_03394 b332a576a63192e3b88f8906beaa1111 378 SMART SM00490 255 336 2.1E-25 T 14-10-2018 IPR001650 Helicase, C-terminal DB29_03394 b332a576a63192e3b88f8906beaa1111 378 Pfam PF00271 Helicase conserved C-terminal domain 234 335 5.5E-24 T 14-10-2018 IPR001650 Helicase, C-terminal DB29_03394 b332a576a63192e3b88f8906beaa1111 378 Pfam PF00270 DEAD/DEAH box helicase 27 192 1.0E-38 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 DB29_03394 b332a576a63192e3b88f8906beaa1111 378 Gene3D G3DSA:3.40.50.300 211 371 4.8E-39 T 14-10-2018 DB29_03394 b332a576a63192e3b88f8906beaa1111 378 Gene3D G3DSA:3.40.50.300 1 207 1.0E-56 T 14-10-2018 DB29_01044 3bab5fb4be55b5c0d8af9af97bf00bbb 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 5.4E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_01044 3bab5fb4be55b5c0d8af9af97bf00bbb 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 5.4E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_01044 3bab5fb4be55b5c0d8af9af97bf00bbb 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 5.4E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_01044 3bab5fb4be55b5c0d8af9af97bf00bbb 247 Gene3D G3DSA:3.40.50.720 1 247 2.5E-71 T 14-10-2018 DB29_01044 3bab5fb4be55b5c0d8af9af97bf00bbb 247 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 DB29_01044 3bab5fb4be55b5c0d8af9af97bf00bbb 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 3.7E-30 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_01044 3bab5fb4be55b5c0d8af9af97bf00bbb 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 3.7E-30 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_01044 3bab5fb4be55b5c0d8af9af97bf00bbb 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 3.7E-30 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_01044 3bab5fb4be55b5c0d8af9af97bf00bbb 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 3.7E-30 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_01044 3bab5fb4be55b5c0d8af9af97bf00bbb 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 3.7E-30 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_01044 3bab5fb4be55b5c0d8af9af97bf00bbb 247 SUPERFAMILY SSF51735 2 240 4.0E-69 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_01044 3bab5fb4be55b5c0d8af9af97bf00bbb 247 Pfam PF00106 short chain dehydrogenase 4 195 3.3E-57 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_00346 8c84f41ef1c8ff375421fd4b6572d9d7 315 SUPERFAMILY SSF53335 72 310 9.49E-45 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DB29_00346 8c84f41ef1c8ff375421fd4b6572d9d7 315 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 3 305 2.5E-86 T 14-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 DB29_00346 8c84f41ef1c8ff375421fd4b6572d9d7 315 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 3 311 34.707 T 14-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 DB29_00346 8c84f41ef1c8ff375421fd4b6572d9d7 315 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 2 311 3.8E-101 T 14-10-2018 DB29_00346 8c84f41ef1c8ff375421fd4b6572d9d7 315 PIRSF PIRSF000401 1 313 1.4E-105 T 14-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 DB29_00346 8c84f41ef1c8ff375421fd4b6572d9d7 315 Gene3D G3DSA:3.40.50.150 116 314 2.1E-60 T 14-10-2018 DB29_04097 77f3405ecd9f518c12301a524c09c3f0 335 SUPERFAMILY SSF56349 5 305 1.29E-24 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 DB29_04097 77f3405ecd9f518c12301a524c09c3f0 335 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 10 87 3.6E-11 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 DB29_04097 77f3405ecd9f518c12301a524c09c3f0 335 Pfam PF00589 Phage integrase family 141 305 1.9E-10 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 DB29_04097 77f3405ecd9f518c12301a524c09c3f0 335 Gene3D G3DSA:1.10.150.130 3 95 8.8E-15 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal DB29_04097 77f3405ecd9f518c12301a524c09c3f0 335 Gene3D G3DSA:1.10.443.10 106 311 2.5E-21 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 DB29_04140 958943782838c4bd43c03240a1d456a1 405 Pfam PF10388 EAL-domain associated signalling protein domain 239 405 1.5E-79 T 14-10-2018 IPR018842 YkuI, C-terminal DB29_04140 958943782838c4bd43c03240a1d456a1 405 Pfam PF00563 EAL domain 6 234 4.7E-19 T 14-10-2018 IPR001633 EAL domain DB29_04140 958943782838c4bd43c03240a1d456a1 405 Gene3D G3DSA:3.30.450.20 289 405 8.4E-44 T 14-10-2018 DB29_04140 958943782838c4bd43c03240a1d456a1 405 SUPERFAMILY SSF141868 3 239 6.8E-29 T 14-10-2018 IPR035919 EAL domain superfamily DB29_04140 958943782838c4bd43c03240a1d456a1 405 SMART SM00052 2 240 8.1E-5 T 14-10-2018 IPR001633 EAL domain DB29_04140 958943782838c4bd43c03240a1d456a1 405 SUPERFAMILY SSF103190 262 402 2.67E-39 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily DB29_04140 958943782838c4bd43c03240a1d456a1 405 Gene3D G3DSA:3.20.20.450 1 228 1.1E-33 T 14-10-2018 IPR035919 EAL domain superfamily DB29_01652 75c3e0bbb238e8aa87290dfdf951b635 209 Pfam PF04854 Protein of unknown function, DUF624 20 96 3.8E-25 T 14-10-2018 IPR006938 Protein of unknown function DUF624 DB29_02896 d9a632a84889abc3d0737e3441a6d1f7 202 Pfam PF00190 Cupin 45 116 8.4E-12 T 14-10-2018 IPR006045 Cupin 1 GO:0045735 DB29_02896 d9a632a84889abc3d0737e3441a6d1f7 202 SUPERFAMILY SSF51182 27 170 1.19E-24 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily DB29_02896 d9a632a84889abc3d0737e3441a6d1f7 202 SMART SM00835 19 156 6.4E-10 T 14-10-2018 IPR006045 Cupin 1 GO:0045735 DB29_02896 d9a632a84889abc3d0737e3441a6d1f7 202 Gene3D G3DSA:2.60.120.10 10 170 3.8E-23 T 14-10-2018 IPR014710 RmlC-like jelly roll fold DB29_02409 09fdec25ffd33f60764e463bd564c203 149 SUPERFAMILY SSF46689 29 132 3.05E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DB29_03700 944cef69e2a253edc4c4e18186a5d4c4 389 Gene3D G3DSA:3.40.640.10 48 287 1.1E-133 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DB29_03700 944cef69e2a253edc4c4e18186a5d4c4 389 Gene3D G3DSA:3.90.1150.10 14 367 1.1E-133 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DB29_03700 944cef69e2a253edc4c4e18186a5d4c4 389 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 205 242 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DB29_03700 944cef69e2a253edc4c4e18186a5d4c4 389 PIRSF PIRSF000521 153 380 6.9E-29 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DB29_03700 944cef69e2a253edc4c4e18186a5d4c4 389 PIRSF PIRSF000521 13 115 8.6E-8 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DB29_03700 944cef69e2a253edc4c4e18186a5d4c4 389 PIRSF PIRSF000521 107 156 0.0038 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DB29_03700 944cef69e2a253edc4c4e18186a5d4c4 389 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 4 381 64.162 T 14-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 DB29_03700 944cef69e2a253edc4c4e18186a5d4c4 389 Pfam PF00202 Aminotransferase class-III 14 377 7.8E-116 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DB29_03700 944cef69e2a253edc4c4e18186a5d4c4 389 SUPERFAMILY SSF53383 4 377 3.09E-121 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DB29_03700 944cef69e2a253edc4c4e18186a5d4c4 389 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 4 377 6.2E-144 T 14-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 DB29_00811 66d3eba4bc5383c07327b399bfdbb665 331 Gene3D G3DSA:3.40.50.1100 61 157 9.7E-97 T 14-10-2018 DB29_00811 66d3eba4bc5383c07327b399bfdbb665 331 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 53 66 - T 14-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 DB29_00811 66d3eba4bc5383c07327b399bfdbb665 331 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 31 315 2.4E-69 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme DB29_00811 66d3eba4bc5383c07327b399bfdbb665 331 Gene3D G3DSA:3.40.50.1100 18 318 9.7E-97 T 14-10-2018 DB29_00811 66d3eba4bc5383c07327b399bfdbb665 331 SUPERFAMILY SSF53686 16 313 1.57E-78 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme DB29_03811 96034982090cb08c516760ecc64ac2ad 263 Pfam PF08769 Sporulation initiation factor Spo0A C terminal 153 256 5.2E-46 T 14-10-2018 IPR014879 Sporulation initiation factor Spo0A, C-terminal GO:0003700|GO:0005509|GO:0005737|GO:0006355|GO:0042173 DB29_03811 96034982090cb08c516760ecc64ac2ad 263 Pfam PF00072 Response regulator receiver domain 6 118 5.3E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DB29_03811 96034982090cb08c516760ecc64ac2ad 263 SMART SM00448 4 117 2.9E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DB29_03811 96034982090cb08c516760ecc64ac2ad 263 Gene3D G3DSA:3.40.50.2300 1 143 3.5E-32 T 14-10-2018 DB29_03811 96034982090cb08c516760ecc64ac2ad 263 SUPERFAMILY SSF46894 146 261 3.32E-48 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DB29_03811 96034982090cb08c516760ecc64ac2ad 263 PIRSF PIRSF002937 1 263 2.1E-134 T 14-10-2018 IPR012052 Sporulation transcription factor Spo0A GO:0003677|GO:0005509|GO:0006355|GO:0043937|GO:0051606 DB29_03811 96034982090cb08c516760ecc64ac2ad 263 SUPERFAMILY SSF52172 1 131 1.71E-31 T 14-10-2018 IPR011006 CheY-like superfamily DB29_03811 96034982090cb08c516760ecc64ac2ad 263 ProDom PD010908 TRANSCRIPTION SPORULATION TWO-COMPONENT DNA-BINDING PHOSPHORYLATION SENSORY REGULATION TRANSDUCTION METAL-BINDING CALCIUM 152 261 4.0E-59 T 14-10-2018 IPR014879 Sporulation initiation factor Spo0A, C-terminal GO:0003700|GO:0005509|GO:0005737|GO:0006355|GO:0042173 DB29_03811 96034982090cb08c516760ecc64ac2ad 263 TIGRFAM TIGR02875 spore_0_A: sporulation transcription factor Spo0A 3 263 5.4E-126 T 14-10-2018 IPR012052 Sporulation transcription factor Spo0A GO:0003677|GO:0005509|GO:0006355|GO:0043937|GO:0051606 DB29_03811 96034982090cb08c516760ecc64ac2ad 263 Gene3D G3DSA:1.10.10.10 144 263 3.0E-54 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_02732 d9076a19d3bee43bc36cb4808b979225 486 Pfam PF00474 Sodium:solute symporter family 32 408 1.3E-27 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 DB29_02732 d9076a19d3bee43bc36cb4808b979225 486 Gene3D G3DSA:1.20.1730.10 19 482 1.1E-52 T 14-10-2018 IPR038377 Sodium/glucose symporter superfamily DB29_02427 b46392d0b5a586af0de50f3ac8a3cc54 813 ProSitePatterns PS00211 ABC transporters family signature. 703 717 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB29_02427 b46392d0b5a586af0de50f3ac8a3cc54 813 Gene3D G3DSA:3.40.50.300 497 809 5.5E-123 T 14-10-2018 DB29_02427 b46392d0b5a586af0de50f3ac8a3cc54 813 Gene3D G3DSA:1.20.1580.10 565 703 5.5E-123 T 14-10-2018 DB29_02427 b46392d0b5a586af0de50f3ac8a3cc54 813 SMART SM00382 513 781 0.71 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_02427 b46392d0b5a586af0de50f3ac8a3cc54 813 SMART SM00382 24 448 4.4E-4 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_02427 b46392d0b5a586af0de50f3ac8a3cc54 813 Gene3D G3DSA:3.40.50.300 7 86 6.6E-46 T 14-10-2018 DB29_02427 b46392d0b5a586af0de50f3ac8a3cc54 813 ProSitePatterns PS00211 ABC transporters family signature. 371 385 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB29_02427 b46392d0b5a586af0de50f3ac8a3cc54 813 SUPERFAMILY SSF52540 494 786 5.33E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_02427 b46392d0b5a586af0de50f3ac8a3cc54 813 Gene3D G3DSA:3.40.50.300 376 477 1.4E-97 T 14-10-2018 DB29_02427 b46392d0b5a586af0de50f3ac8a3cc54 813 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 133 798 1.7E-221 T 14-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 DB29_02427 b46392d0b5a586af0de50f3ac8a3cc54 813 Gene3D G3DSA:1.20.1580.10 134 375 1.4E-97 T 14-10-2018 DB29_02427 b46392d0b5a586af0de50f3ac8a3cc54 813 SUPERFAMILY SSF52540 5 474 2.62E-34 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_02427 b46392d0b5a586af0de50f3ac8a3cc54 813 Gene3D G3DSA:1.10.8.280 170 285 1.4E-97 T 14-10-2018 DB29_02427 b46392d0b5a586af0de50f3ac8a3cc54 813 Pfam PF00005 ABC transporter 15 97 7.0E-6 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB29_02427 b46392d0b5a586af0de50f3ac8a3cc54 813 Gene3D G3DSA:1.20.1580.10 87 125 6.6E-46 T 14-10-2018 DB29_03668 51842241468c0f8868f856286f5b270c 216 Gene3D G3DSA:1.20.58.220 2 216 1.8E-58 T 14-10-2018 IPR038078 PhoU-like domain superfamily DB29_03668 51842241468c0f8868f856286f5b270c 216 PIRSF PIRSF003107 1 216 2.3E-53 T 14-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 DB29_03668 51842241468c0f8868f856286f5b270c 216 Pfam PF01895 PhoU domain 20 103 9.3E-19 T 14-10-2018 IPR026022 PhoU domain DB29_03668 51842241468c0f8868f856286f5b270c 216 Pfam PF01895 PhoU domain 121 204 7.0E-16 T 14-10-2018 IPR026022 PhoU domain DB29_03668 51842241468c0f8868f856286f5b270c 216 SUPERFAMILY SSF109755 3 215 3.45E-54 T 14-10-2018 DB29_03668 51842241468c0f8868f856286f5b270c 216 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 5 211 2.3E-55 T 14-10-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 DB29_01921 0e14fc52ebda68582eddb3570798633d 138 SUPERFAMILY SSF69065 7 127 1.13E-44 T 14-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 DB29_01921 0e14fc52ebda68582eddb3570798633d 138 PIRSF PIRSF005520 1 136 2.2E-54 T 14-10-2018 IPR008226 Mini-ribonuclease 3 family DB29_01921 0e14fc52ebda68582eddb3570798633d 138 Hamap MF_01468 Mini-ribonuclease 3 [mrnC]. 5 131 31.3 T 14-10-2018 IPR008226 Mini-ribonuclease 3 family DB29_01921 0e14fc52ebda68582eddb3570798633d 138 Pfam PF00636 Ribonuclease III domain 15 114 1.0E-15 T 14-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 DB29_01921 0e14fc52ebda68582eddb3570798633d 138 Gene3D G3DSA:1.10.1520.10 2 137 6.1E-50 T 14-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 DB29_00725 c1913a78951972a5ade14533529f4a59 180 PIRSF PIRSF016897 1 180 5.5E-59 T 14-10-2018 IPR006699 Glycerol uptake operon antiterminator GO:0006071|GO:0006355 DB29_00725 c1913a78951972a5ade14533529f4a59 180 Gene3D G3DSA:3.20.20.400 1 180 4.3E-64 T 14-10-2018 IPR035928 GlpP-like superfamily DB29_00725 c1913a78951972a5ade14533529f4a59 180 SUPERFAMILY SSF110391 7 179 2.48E-57 T 14-10-2018 IPR035928 GlpP-like superfamily DB29_00725 c1913a78951972a5ade14533529f4a59 180 Pfam PF04309 Glycerol-3-phosphate responsive antiterminator 7 179 5.2E-59 T 14-10-2018 IPR006699 Glycerol uptake operon antiterminator GO:0006071|GO:0006355 DB29_01905 a008484fe7a50c474a128b797e309d7f 692 Pfam PF03764 Elongation factor G, domain IV 477 595 3.0E-47 T 14-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 DB29_01905 a008484fe7a50c474a128b797e309d7f 692 Pfam PF00679 Elongation factor G C-terminus 598 684 1.2E-31 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like DB29_01905 a008484fe7a50c474a128b797e309d7f 692 Pfam PF14492 Elongation Factor G, domain II 402 475 1.7E-33 T 14-10-2018 DB29_01905 a008484fe7a50c474a128b797e309d7f 692 PRINTS PR00315 GTP-binding elongation factor signature 78 88 4.1E-17 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DB29_01905 a008484fe7a50c474a128b797e309d7f 692 PRINTS PR00315 GTP-binding elongation factor signature 94 105 4.1E-17 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DB29_01905 a008484fe7a50c474a128b797e309d7f 692 PRINTS PR00315 GTP-binding elongation factor signature 12 25 4.1E-17 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DB29_01905 a008484fe7a50c474a128b797e309d7f 692 PRINTS PR00315 GTP-binding elongation factor signature 58 66 4.1E-17 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DB29_01905 a008484fe7a50c474a128b797e309d7f 692 PRINTS PR00315 GTP-binding elongation factor signature 130 139 4.1E-17 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DB29_01905 a008484fe7a50c474a128b797e309d7f 692 SUPERFAMILY SSF52540 6 280 8.88E-111 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_01905 a008484fe7a50c474a128b797e309d7f 692 SUPERFAMILY SSF54980 402 479 6.12E-25 T 14-10-2018 IPR035647 EF-G domain III/V-like DB29_01905 a008484fe7a50c474a128b797e309d7f 692 SMART SM00838 598 685 7.6E-60 T 14-10-2018 IPR000640 Elongation factor EFG, domain V-like DB29_01905 a008484fe7a50c474a128b797e309d7f 692 Gene3D G3DSA:3.30.70.240 602 672 3.5E-95 T 14-10-2018 DB29_01905 a008484fe7a50c474a128b797e309d7f 692 Gene3D G3DSA:3.40.50.300 1 290 7.8E-113 T 14-10-2018 DB29_01905 a008484fe7a50c474a128b797e309d7f 692 SUPERFAMILY SSF50447 263 402 1.77E-36 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily DB29_01905 a008484fe7a50c474a128b797e309d7f 692 TIGRFAM TIGR00484 EF-G: translation elongation factor G 1 689 0.0 T 14-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 DB29_01905 a008484fe7a50c474a128b797e309d7f 692 SUPERFAMILY SSF54211 477 597 4.3E-44 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DB29_01905 a008484fe7a50c474a128b797e309d7f 692 Gene3D G3DSA:2.40.30.10 291 403 7.7E-46 T 14-10-2018 DB29_01905 a008484fe7a50c474a128b797e309d7f 692 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 10 180 1.3E-42 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 DB29_01905 a008484fe7a50c474a128b797e309d7f 692 SUPERFAMILY SSF54980 601 688 1.77E-31 T 14-10-2018 IPR035647 EF-G domain III/V-like DB29_01905 a008484fe7a50c474a128b797e309d7f 692 Pfam PF00009 Elongation factor Tu GTP binding domain 9 280 5.9E-70 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DB29_01905 a008484fe7a50c474a128b797e309d7f 692 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site DB29_01905 a008484fe7a50c474a128b797e309d7f 692 Hamap MF_00054_B Elongation factor G [fusA]. 6 689 112.312 T 14-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 DB29_01905 a008484fe7a50c474a128b797e309d7f 692 Gene3D G3DSA:3.30.70.870 404 481 2.7E-31 T 14-10-2018 DB29_01905 a008484fe7a50c474a128b797e309d7f 692 SMART SM00889 478 596 1.2E-72 T 14-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 DB29_01905 a008484fe7a50c474a128b797e309d7f 692 Pfam PF03144 Elongation factor Tu domain 2 322 389 4.9E-16 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 DB29_01905 a008484fe7a50c474a128b797e309d7f 692 Gene3D G3DSA:3.30.230.10 482 685 3.5E-95 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DB29_00112 707f85b8493ba7ffb2e86c5f54636d51 196 SMART SM00563 35 147 1.3E-38 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 DB29_00112 707f85b8493ba7ffb2e86c5f54636d51 196 TIGRFAM TIGR00530 AGP_acyltrn: 1-acylglycerol-3-phosphate O-acyltransferases 19 144 6.3E-32 T 14-10-2018 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase GO:0003841|GO:0008654|GO:0016020 KEGG: 00561+2.3.1.51|KEGG: 00564+2.3.1.51|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7417|MetaCyc: PWY-7587|MetaCyc: PWY-7589|MetaCyc: PWY-7782|Reactome: R-HSA-1483166 DB29_00112 707f85b8493ba7ffb2e86c5f54636d51 196 Pfam PF01553 Acyltransferase 20 144 1.5E-27 T 14-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 DB29_00112 707f85b8493ba7ffb2e86c5f54636d51 196 SUPERFAMILY SSF69593 2 190 1.02E-55 T 14-10-2018 DB29_03032 517234c7fc2be4f2e48eff4ae9fa00d1 280 SUPERFAMILY SSF52540 3 233 1.08E-69 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_03032 517234c7fc2be4f2e48eff4ae9fa00d1 280 SMART SM00382 32 213 1.3E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_03032 517234c7fc2be4f2e48eff4ae9fa00d1 280 Pfam PF00005 ABC transporter 23 163 1.9E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB29_03032 517234c7fc2be4f2e48eff4ae9fa00d1 280 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB29_03032 517234c7fc2be4f2e48eff4ae9fa00d1 280 Gene3D G3DSA:3.40.50.300 2 275 1.6E-64 T 14-10-2018 DB29_04069 bf28486f5747cbbd9c2f50c4be4fe696 236 Pfam PF00392 Bacterial regulatory proteins, gntR family 8 69 1.2E-18 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DB29_04069 bf28486f5747cbbd9c2f50c4be4fe696 236 SUPERFAMILY SSF64288 57 233 2.36E-36 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily DB29_04069 bf28486f5747cbbd9c2f50c4be4fe696 236 SMART SM00866 91 228 4.6E-21 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 DB29_04069 bf28486f5747cbbd9c2f50c4be4fe696 236 SUPERFAMILY SSF46785 4 79 1.32E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_04069 bf28486f5747cbbd9c2f50c4be4fe696 236 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 43 59 1.6E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DB29_04069 bf28486f5747cbbd9c2f50c4be4fe696 236 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 29 43 1.6E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DB29_04069 bf28486f5747cbbd9c2f50c4be4fe696 236 Pfam PF07702 UTRA domain 92 228 3.4E-25 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 DB29_04069 bf28486f5747cbbd9c2f50c4be4fe696 236 Gene3D G3DSA:1.10.10.10 1 73 1.9E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_04069 bf28486f5747cbbd9c2f50c4be4fe696 236 Gene3D G3DSA:3.40.1410.10 74 233 2.7E-29 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily DB29_04069 bf28486f5747cbbd9c2f50c4be4fe696 236 SMART SM00345 12 69 3.4E-18 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DB29_01617 a715b0b39d5eb37db833334c4858122f 207 Pfam PF04239 Protein of unknown function (DUF421) 89 161 1.5E-24 T 14-10-2018 IPR007353 Protein of unknown function DUF421 DB29_01617 a715b0b39d5eb37db833334c4858122f 207 Gene3D G3DSA:3.30.240.20 80 147 2.9E-19 T 14-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily DB29_03868 33db86e353d48ad0df4e01f49e581058 268 SUPERFAMILY SSF56655 7 259 1.28E-70 T 14-10-2018 DB29_03868 33db86e353d48ad0df4e01f49e581058 268 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 85 98 - T 14-10-2018 IPR020583 Inositol monophosphatase, metal-binding site DB29_03868 33db86e353d48ad0df4e01f49e581058 268 Gene3D G3DSA:3.30.540.10 1 144 3.1E-38 T 14-10-2018 DB29_03868 33db86e353d48ad0df4e01f49e581058 268 PRINTS PR00377 Inositol monophosphatase superfamily signature 180 201 2.8E-35 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 DB29_03868 33db86e353d48ad0df4e01f49e581058 268 PRINTS PR00377 Inositol monophosphatase superfamily signature 41 61 2.8E-35 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 DB29_03868 33db86e353d48ad0df4e01f49e581058 268 PRINTS PR00377 Inositol monophosphatase superfamily signature 63 79 2.8E-35 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 DB29_03868 33db86e353d48ad0df4e01f49e581058 268 PRINTS PR00377 Inositol monophosphatase superfamily signature 134 157 2.8E-35 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 DB29_03868 33db86e353d48ad0df4e01f49e581058 268 PRINTS PR00377 Inositol monophosphatase superfamily signature 211 235 2.8E-35 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 DB29_03868 33db86e353d48ad0df4e01f49e581058 268 PRINTS PR00377 Inositol monophosphatase superfamily signature 85 101 2.8E-35 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 DB29_03868 33db86e353d48ad0df4e01f49e581058 268 Pfam PF00459 Inositol monophosphatase family 11 260 2.0E-59 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 DB29_03868 33db86e353d48ad0df4e01f49e581058 268 Gene3D G3DSA:3.40.190.80 146 267 2.3E-32 T 14-10-2018 DB29_01189 65a6c2a5b13439720213538c50a749b7 338 SMART SM00331 120 336 8.0E-50 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 DB29_01189 65a6c2a5b13439720213538c50a749b7 338 SMART SM00332 114 334 0.0083 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 DB29_01189 65a6c2a5b13439720213538c50a749b7 338 Gene3D G3DSA:3.60.40.10 87 338 3.9E-57 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 DB29_01189 65a6c2a5b13439720213538c50a749b7 338 SUPERFAMILY SSF81606 134 335 8.89E-9 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 DB29_01189 65a6c2a5b13439720213538c50a749b7 338 SUPERFAMILY SSF101215 5 85 7.85E-28 T 14-10-2018 IPR017944 KaiA/RbsU helical domain superfamily GO:0006468 DB29_01189 65a6c2a5b13439720213538c50a749b7 338 Pfam PF08673 Phosphoserine phosphatase RsbU, N-terminal domain 11 84 8.0E-28 T 14-10-2018 IPR014787 Phosphoserine phosphatase RsbU, N-terminal KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3 DB29_01189 65a6c2a5b13439720213538c50a749b7 338 Gene3D G3DSA:1.10.1240.30 3 85 4.9E-26 T 14-10-2018 IPR017944 KaiA/RbsU helical domain superfamily GO:0006468 DB29_01189 65a6c2a5b13439720213538c50a749b7 338 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 147 336 3.4E-44 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 DB29_01189 65a6c2a5b13439720213538c50a749b7 338 ProDom PD685490 RSBU REGULATOR SIGMA REGULATION FACTOR B PHOSPHATASE SIGMAB INDIRECT SIGMA-B 12 92 3.0E-39 T 14-10-2018 IPR014787 Phosphoserine phosphatase RsbU, N-terminal KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3 DB29_01858 84a4a71aadaef58d84e749773b92a5bc 681 Pfam PF02378 Phosphotransferase system, EIIC 13 342 7.3E-96 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 DB29_01858 84a4a71aadaef58d84e749773b92a5bc 681 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 535 654 8.3E-48 T 14-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 DB29_01858 84a4a71aadaef58d84e749773b92a5bc 681 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 534 654 1.3E-53 T 14-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 DB29_01858 84a4a71aadaef58d84e749773b92a5bc 681 SUPERFAMILY SSF51261 530 675 5.23E-55 T 14-10-2018 IPR011055 Duplicated hybrid motif DB29_01858 84a4a71aadaef58d84e749773b92a5bc 681 TIGRFAM TIGR02002 PTS-II-BC-glcB: PTS system, glucose-specific IIBC component 2 502 5.2E-245 T 14-10-2018 IPR011299 PTS system glucose-specific IIBC component GO:0005355|GO:0016021|GO:1904659 DB29_01858 84a4a71aadaef58d84e749773b92a5bc 681 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 596 608 - T 14-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 DB29_01858 84a4a71aadaef58d84e749773b92a5bc 681 Gene3D G3DSA:3.30.1360.60 423 503 2.5E-27 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 DB29_01858 84a4a71aadaef58d84e749773b92a5bc 681 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 402 486 1.6E-22 T 14-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 DB29_01858 84a4a71aadaef58d84e749773b92a5bc 681 Pfam PF00367 phosphotransferase system, EIIB 430 462 3.4E-13 T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 DB29_01858 84a4a71aadaef58d84e749773b92a5bc 681 Gene3D G3DSA:2.70.70.10 522 681 1.1E-61 T 14-10-2018 IPR011055 Duplicated hybrid motif DB29_01858 84a4a71aadaef58d84e749773b92a5bc 681 SUPERFAMILY SSF55604 427 500 1.44E-20 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 DB29_01858 84a4a71aadaef58d84e749773b92a5bc 681 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 440 457 - T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 DB29_02340 10c0de73ea63faccf314c127f72ccb5e 85 SUPERFAMILY SSF103473 25 74 6.28E-5 T 14-10-2018 IPR036259 MFS transporter superfamily DB29_02340 10c0de73ea63faccf314c127f72ccb5e 85 Pfam PF09527 Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter 23 75 1.5E-11 T 14-10-2018 IPR032820 Putative F0F1-ATPase subunit, Ca2+/Mg2+ transporter DB29_00089 7a5675f2a73d1822d3c4e3ecbf1558b5 498 Pfam PF00425 chorismate binding enzyme 223 476 7.4E-97 T 14-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal DB29_00089 7a5675f2a73d1822d3c4e3ecbf1558b5 498 TIGRFAM TIGR00564 trpE_most: anthranilate synthase component I 28 484 5.8E-168 T 14-10-2018 IPR005256 Anthranilate synthase component I, PabB-like GO:0000162|GO:0004049 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 DB29_00089 7a5675f2a73d1822d3c4e3ecbf1558b5 498 Pfam PF04715 Anthranilate synthase component I, N terminal region 29 167 1.2E-28 T 14-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 DB29_00089 7a5675f2a73d1822d3c4e3ecbf1558b5 498 PRINTS PR00095 Anthranilate synthase component I signature 338 351 3.7E-22 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 DB29_00089 7a5675f2a73d1822d3c4e3ecbf1558b5 498 PRINTS PR00095 Anthranilate synthase component I signature 433 447 3.7E-22 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 DB29_00089 7a5675f2a73d1822d3c4e3ecbf1558b5 498 PRINTS PR00095 Anthranilate synthase component I signature 324 337 3.7E-22 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 DB29_00089 7a5675f2a73d1822d3c4e3ecbf1558b5 498 PRINTS PR00095 Anthranilate synthase component I signature 418 432 3.7E-22 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 DB29_00089 7a5675f2a73d1822d3c4e3ecbf1558b5 498 SUPERFAMILY SSF56322 17 485 1.44E-147 T 14-10-2018 IPR005801 ADC synthase GO:0009058 DB29_00089 7a5675f2a73d1822d3c4e3ecbf1558b5 498 Gene3D G3DSA:3.60.120.10 1 495 2.0E-164 T 14-10-2018 IPR005801 ADC synthase GO:0009058 DB29_00828 8e5b676ad1bf354937aa76d959aada75 261 Pfam PF02839 Carbohydrate binding domain 236 258 1.7E-6 T 14-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 DB29_00828 8e5b676ad1bf354937aa76d959aada75 261 Gene3D G3DSA:2.70.50.50 34 200 1.8E-70 T 14-10-2018 DB29_00828 8e5b676ad1bf354937aa76d959aada75 261 SMART SM00495 219 261 4.0E-18 T 14-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 DB29_00828 8e5b676ad1bf354937aa76d959aada75 261 Gene3D G3DSA:2.10.10.20 216 261 1.8E-17 T 14-10-2018 DB29_00828 8e5b676ad1bf354937aa76d959aada75 261 Pfam PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading 34 197 6.5E-38 T 14-10-2018 IPR004302 Cellulose/chitin-binding protein, N-terminal DB29_00828 8e5b676ad1bf354937aa76d959aada75 261 SUPERFAMILY SSF51055 213 260 8.89E-17 T 14-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 DB29_00828 8e5b676ad1bf354937aa76d959aada75 261 SUPERFAMILY SSF81296 34 200 4.62E-62 T 14-10-2018 IPR014756 Immunoglobulin E-set DB29_00419 f0b79c1b73dc963b0d54844654b4a099 216 Gene3D G3DSA:3.40.50.150 1 215 7.1E-60 T 14-10-2018 DB29_00419 f0b79c1b73dc963b0d54844654b4a099 216 SUPERFAMILY SSF53335 2 213 1.32E-41 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DB29_00419 f0b79c1b73dc963b0d54844654b4a099 216 Pfam PF01596 O-methyltransferase 12 213 3.5E-33 T 14-10-2018 IPR002935 O-methyltransferase, family 3 GO:0008171 DB29_00707 a02bb43285ccdf899ecc443a4f0935ee 98 SMART SM00966 8 51 2.0E-10 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 DB29_00707 a02bb43285ccdf899ecc443a4f0935ee 98 TIGRFAM TIGR01439 lp_hng_hel_AbrB: transcriptional regulator, AbrB family 8 48 9.8E-12 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 DB29_00707 a02bb43285ccdf899ecc443a4f0935ee 98 Gene3D G3DSA:2.10.260.10 1 53 4.8E-23 T 14-10-2018 DB29_00707 a02bb43285ccdf899ecc443a4f0935ee 98 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 8 50 5.8E-11 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 DB29_00707 a02bb43285ccdf899ecc443a4f0935ee 98 SUPERFAMILY SSF89447 1 50 1.96E-15 T 14-10-2018 IPR037914 SpoVT-AbrB domain superfamily DB29_04114 016b073bb879eb049cf03c9dfb5f7d74 208 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 133 144 1.6E-8 T 14-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 DB29_04114 016b073bb879eb049cf03c9dfb5f7d74 208 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 162 174 1.6E-8 T 14-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 DB29_04114 016b073bb879eb049cf03c9dfb5f7d74 208 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 122 132 1.6E-8 T 14-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 DB29_04114 016b073bb879eb049cf03c9dfb5f7d74 208 Hamap MF_00015 LexA repressor [lexA]. 3 207 34.347 T 14-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 DB29_04114 016b073bb879eb049cf03c9dfb5f7d74 208 Pfam PF00717 Peptidase S24-like 126 191 1.0E-17 T 14-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C DB29_04114 016b073bb879eb049cf03c9dfb5f7d74 208 Gene3D G3DSA:1.10.10.10 3 68 6.9E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_04114 016b073bb879eb049cf03c9dfb5f7d74 208 TIGRFAM TIGR00498 lexA: repressor LexA 1 207 2.2E-74 T 14-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 DB29_04114 016b073bb879eb049cf03c9dfb5f7d74 208 SUPERFAMILY SSF46785 3 70 8.35E-24 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_04114 016b073bb879eb049cf03c9dfb5f7d74 208 Gene3D G3DSA:2.10.109.10 91 207 3.6E-41 T 14-10-2018 DB29_04114 016b073bb879eb049cf03c9dfb5f7d74 208 Pfam PF01726 LexA DNA binding domain 1 65 1.2E-29 T 14-10-2018 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 DB29_04114 016b073bb879eb049cf03c9dfb5f7d74 208 SUPERFAMILY SSF51306 86 205 1.4E-36 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily DB29_04127 54959bfb2ffc8b8b31e6461757c77e8a 905 PRINTS PR00415 Aconitase family signature 219 234 1.7E-38 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DB29_04127 54959bfb2ffc8b8b31e6461757c77e8a 905 PRINTS PR00415 Aconitase family signature 148 161 1.7E-38 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DB29_04127 54959bfb2ffc8b8b31e6461757c77e8a 905 PRINTS PR00415 Aconitase family signature 281 294 1.7E-38 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DB29_04127 54959bfb2ffc8b8b31e6461757c77e8a 905 PRINTS PR00415 Aconitase family signature 172 180 1.7E-38 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DB29_04127 54959bfb2ffc8b8b31e6461757c77e8a 905 PRINTS PR00415 Aconitase family signature 205 218 1.7E-38 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DB29_04127 54959bfb2ffc8b8b31e6461757c77e8a 905 PRINTS PR00415 Aconitase family signature 295 308 1.7E-38 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DB29_04127 54959bfb2ffc8b8b31e6461757c77e8a 905 PRINTS PR00415 Aconitase family signature 376 390 1.7E-38 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DB29_04127 54959bfb2ffc8b8b31e6461757c77e8a 905 PRINTS PR00415 Aconitase family signature 504 517 1.7E-38 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DB29_04127 54959bfb2ffc8b8b31e6461757c77e8a 905 PRINTS PR00415 Aconitase family signature 442 453 1.7E-38 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DB29_04127 54959bfb2ffc8b8b31e6461757c77e8a 905 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 19 902 0.0 T 14-10-2018 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-917937 DB29_04127 54959bfb2ffc8b8b31e6461757c77e8a 905 Gene3D G3DSA:3.30.499.10 377 601 1.5E-101 T 14-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 DB29_04127 54959bfb2ffc8b8b31e6461757c77e8a 905 ProSitePatterns PS01244 Aconitase family signature 2. 504 517 - T 14-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 DB29_04127 54959bfb2ffc8b8b31e6461757c77e8a 905 Gene3D G3DSA:3.30.499.20 7 376 4.7E-156 T 14-10-2018 DB29_04127 54959bfb2ffc8b8b31e6461757c77e8a 905 Gene3D G3DSA:1.10.1440.20 602 662 9.5E-23 T 14-10-2018 DB29_04127 54959bfb2ffc8b8b31e6461757c77e8a 905 ProSitePatterns PS00450 Aconitase family signature 1. 438 454 - T 14-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 DB29_04127 54959bfb2ffc8b8b31e6461757c77e8a 905 Gene3D G3DSA:3.20.19.10 665 902 9.1E-104 T 14-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 DB29_04127 54959bfb2ffc8b8b31e6461757c77e8a 905 Pfam PF00330 Aconitase family (aconitate hydratase) 76 573 1.3E-174 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DB29_04127 54959bfb2ffc8b8b31e6461757c77e8a 905 SUPERFAMILY SSF53732 6 638 1.7E-223 T 14-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 DB29_04127 54959bfb2ffc8b8b31e6461757c77e8a 905 Pfam PF00694 Aconitase C-terminal domain 703 830 7.2E-46 T 14-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 DB29_04127 54959bfb2ffc8b8b31e6461757c77e8a 905 SUPERFAMILY SSF52016 642 901 1.16E-87 T 14-10-2018 DB29_01937 feb29e2a85357e708d4befed1b8ff1cd 172 Gene3D G3DSA:3.30.70.560 1 163 2.6E-60 T 14-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 DB29_01937 feb29e2a85357e708d4befed1b8ff1cd 172 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 5 133 6.0E-41 T 14-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 DB29_01937 feb29e2a85357e708d4befed1b8ff1cd 172 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 4 133 1.6E-47 T 14-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 DB29_01937 feb29e2a85357e708d4befed1b8ff1cd 172 SUPERFAMILY SSF55083 1 152 1.31E-57 T 14-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 DB29_01937 feb29e2a85357e708d4befed1b8ff1cd 172 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 88 99 - T 14-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 DB29_00305 4eb08092c44c2b91280841ed8249636d 292 TIGRFAM TIGR00587 nfo: apurinic endonuclease (APN1) 4 283 6.8E-102 T 14-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 DB29_00305 4eb08092c44c2b91280841ed8249636d 292 SMART SM00518 4 286 9.8E-127 T 14-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 DB29_00305 4eb08092c44c2b91280841ed8249636d 292 Gene3D G3DSA:3.20.20.150 1 291 3.1E-104 T 14-10-2018 DB29_00305 4eb08092c44c2b91280841ed8249636d 292 SUPERFAMILY SSF51658 3 288 7.07E-102 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily DB29_00305 4eb08092c44c2b91280841ed8249636d 292 ProSitePatterns PS00729 AP endonucleases family 2 signature 1. 70 78 - T 14-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 DB29_00305 4eb08092c44c2b91280841ed8249636d 292 Hamap MF_00152 Probable endonuclease 4 [nfo]. 3 286 42.689 T 14-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 DB29_00305 4eb08092c44c2b91280841ed8249636d 292 ProSitePatterns PS00730 AP endonucleases family 2 signature 2. 176 183 - T 14-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 DB29_00305 4eb08092c44c2b91280841ed8249636d 292 Pfam PF01261 Xylose isomerase-like TIM barrel 22 238 1.1E-43 T 14-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain DB29_02546 7dc7f02925ca5cce47661341baf05a0a 438 Pfam PF02056 Family 4 glycosyl hydrolase 7 188 9.2E-71 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 DB29_02546 7dc7f02925ca5cce47661341baf05a0a 438 Gene3D G3DSA:3.40.50.720 2 171 1.2E-71 T 14-10-2018 DB29_02546 7dc7f02925ca5cce47661341baf05a0a 438 ProSitePatterns PS01324 Glycosyl hydrolases family 4 signature. 142 173 - T 14-10-2018 IPR019802 Glycoside hydrolase, family 4, conserved site GO:0004553|GO:0005975 DB29_02546 7dc7f02925ca5cce47661341baf05a0a 438 SUPERFAMILY SSF56327 174 437 3.39E-93 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 DB29_02546 7dc7f02925ca5cce47661341baf05a0a 438 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 198 413 6.1E-52 T 14-10-2018 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 DB29_02546 7dc7f02925ca5cce47661341baf05a0a 438 PRINTS PR00732 Glycosyl hydrolase family 4 signature 194 206 5.3E-50 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 DB29_02546 7dc7f02925ca5cce47661341baf05a0a 438 PRINTS PR00732 Glycosyl hydrolase family 4 signature 168 179 5.3E-50 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 DB29_02546 7dc7f02925ca5cce47661341baf05a0a 438 PRINTS PR00732 Glycosyl hydrolase family 4 signature 142 159 5.3E-50 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 DB29_02546 7dc7f02925ca5cce47661341baf05a0a 438 PRINTS PR00732 Glycosyl hydrolase family 4 signature 78 94 5.3E-50 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 DB29_02546 7dc7f02925ca5cce47661341baf05a0a 438 PRINTS PR00732 Glycosyl hydrolase family 4 signature 7 22 5.3E-50 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 DB29_02546 7dc7f02925ca5cce47661341baf05a0a 438 PRINTS PR00732 Glycosyl hydrolase family 4 signature 99 112 5.3E-50 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 DB29_02546 7dc7f02925ca5cce47661341baf05a0a 438 PRINTS PR00732 Glycosyl hydrolase family 4 signature 113 133 5.3E-50 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 DB29_02546 7dc7f02925ca5cce47661341baf05a0a 438 Gene3D G3DSA:3.90.110.10 172 438 6.2E-101 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 DB29_02546 7dc7f02925ca5cce47661341baf05a0a 438 SUPERFAMILY SSF51735 5 169 6.72E-57 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_02212 79eb11c41c877d4d273d117b05ab2d09 637 Pfam PF02824 TGS domain 7 63 4.3E-7 T 14-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 DB29_02212 79eb11c41c877d4d273d117b05ab2d09 637 Gene3D G3DSA:3.10.20.30 4 65 4.1E-18 T 14-10-2018 IPR012675 Beta-grasp domain superfamily DB29_02212 79eb11c41c877d4d273d117b05ab2d09 637 SUPERFAMILY SSF55681 244 526 1.35E-94 T 14-10-2018 DB29_02212 79eb11c41c877d4d273d117b05ab2d09 637 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 324 528 6.6E-40 T 14-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 DB29_02212 79eb11c41c877d4d273d117b05ab2d09 637 SUPERFAMILY SSF81271 6 64 2.91E-12 T 14-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 DB29_02212 79eb11c41c877d4d273d117b05ab2d09 637 SUPERFAMILY SSF52954 530 634 2.11E-30 T 14-10-2018 DB29_02212 79eb11c41c877d4d273d117b05ab2d09 637 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 171 220 3.9E-18 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 DB29_02212 79eb11c41c877d4d273d117b05ab2d09 637 SUPERFAMILY SSF55186 68 242 1.15E-65 T 14-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 DB29_02212 79eb11c41c877d4d273d117b05ab2d09 637 PRINTS PR01047 Threonyl-tRNA synthetase signature 330 358 1.5E-53 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 DB29_02212 79eb11c41c877d4d273d117b05ab2d09 637 PRINTS PR01047 Threonyl-tRNA synthetase signature 534 546 1.5E-53 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 DB29_02212 79eb11c41c877d4d273d117b05ab2d09 637 PRINTS PR01047 Threonyl-tRNA synthetase signature 363 386 1.5E-53 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 DB29_02212 79eb11c41c877d4d273d117b05ab2d09 637 PRINTS PR01047 Threonyl-tRNA synthetase signature 464 492 1.5E-53 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 DB29_02212 79eb11c41c877d4d273d117b05ab2d09 637 PRINTS PR01047 Threonyl-tRNA synthetase signature 507 520 1.5E-53 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 DB29_02212 79eb11c41c877d4d273d117b05ab2d09 637 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 70 634 34.563 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 DB29_02212 79eb11c41c877d4d273d117b05ab2d09 637 Gene3D G3DSA:3.30.980.10 68 224 6.2E-65 T 14-10-2018 DB29_02212 79eb11c41c877d4d273d117b05ab2d09 637 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 76 631 1.1E-235 T 14-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 DB29_02212 79eb11c41c877d4d273d117b05ab2d09 637 SMART SM00863 171 220 1.8E-27 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 DB29_02212 79eb11c41c877d4d273d117b05ab2d09 637 Gene3D G3DSA:3.30.930.10 225 531 1.2E-133 T 14-10-2018 DB29_02212 79eb11c41c877d4d273d117b05ab2d09 637 Pfam PF03129 Anticodon binding domain 541 629 3.9E-21 T 14-10-2018 IPR004154 Anticodon-binding DB29_02212 79eb11c41c877d4d273d117b05ab2d09 637 Gene3D G3DSA:3.40.50.800 532 637 1.0E-29 T 14-10-2018 IPR036621 Anticodon-binding domain superfamily DB29_01490 f8d95be1f035700c396be8dbf66093de 403 Pfam PF02515 CoA-transferase family III 11 369 4.0E-125 T 14-10-2018 IPR003673 CoA-transferase family III GO:0003824 DB29_01490 f8d95be1f035700c396be8dbf66093de 403 Gene3D G3DSA:3.40.50.10540 10 397 4.6E-130 T 14-10-2018 IPR023606 CoA-transferase family III domain superfamily DB29_01490 f8d95be1f035700c396be8dbf66093de 403 SUPERFAMILY SSF89796 9 403 5.76E-128 T 14-10-2018 IPR023606 CoA-transferase family III domain superfamily DB29_01490 f8d95be1f035700c396be8dbf66093de 403 Gene3D G3DSA:3.30.1540.10 237 329 4.6E-130 T 14-10-2018 DB29_02091 2d4e9dea9cdeaec097b4b90f84c9e3a3 853 Pfam PF00271 Helicase conserved C-terminal domain 419 493 8.1E-5 T 14-10-2018 IPR001650 Helicase, C-terminal DB29_02091 2d4e9dea9cdeaec097b4b90f84c9e3a3 853 Gene3D G3DSA:3.40.50.300 329 515 3.0E-29 T 14-10-2018 DB29_02091 2d4e9dea9cdeaec097b4b90f84c9e3a3 853 Pfam PF00270 DEAD/DEAH box helicase 136 263 1.3E-10 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 DB29_02091 2d4e9dea9cdeaec097b4b90f84c9e3a3 853 Gene3D G3DSA:3.40.50.300 113 313 2.3E-14 T 14-10-2018 DB29_02091 2d4e9dea9cdeaec097b4b90f84c9e3a3 853 SUPERFAMILY SSF52540 49 276 3.17E-20 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_02091 2d4e9dea9cdeaec097b4b90f84c9e3a3 853 SMART SM00487 131 324 5.3E-14 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DB29_02091 2d4e9dea9cdeaec097b4b90f84c9e3a3 853 SUPERFAMILY SSF52540 350 512 5.32E-28 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_02091 2d4e9dea9cdeaec097b4b90f84c9e3a3 853 SMART SM00490 412 494 4.5E-5 T 14-10-2018 IPR001650 Helicase, C-terminal DB29_04091 35e0d0dcbd0926c099965984a3ec0ab1 871 Gene3D G3DSA:1.10.1420.10 389 525 1.4E-103 T 14-10-2018 DB29_04091 35e0d0dcbd0926c099965984a3ec0ab1 871 Gene3D G3DSA:3.40.50.300 558 865 4.5E-103 T 14-10-2018 DB29_04091 35e0d0dcbd0926c099965984a3ec0ab1 871 SUPERFAMILY SSF48334 257 555 5.36E-88 T 14-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily DB29_04091 35e0d0dcbd0926c099965984a3ec0ab1 871 Pfam PF01624 MutS domain I 6 116 1.7E-46 T 14-10-2018 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 DB29_04091 35e0d0dcbd0926c099965984a3ec0ab1 871 Pfam PF05188 MutS domain II 125 224 6.9E-7 T 14-10-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 DB29_04091 35e0d0dcbd0926c099965984a3ec0ab1 871 Pfam PF05190 MutS family domain IV 417 508 1.4E-31 T 14-10-2018 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 DB29_04091 35e0d0dcbd0926c099965984a3ec0ab1 871 SMART SM00534 598 785 4.2E-115 T 14-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 DB29_04091 35e0d0dcbd0926c099965984a3ec0ab1 871 Gene3D G3DSA:3.40.1170.10 1 118 1.2E-48 T 14-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 DB29_04091 35e0d0dcbd0926c099965984a3ec0ab1 871 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 5 867 0.0 T 14-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 DB29_04091 35e0d0dcbd0926c099965984a3ec0ab1 871 SUPERFAMILY SSF53150 114 270 4.58E-28 T 14-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 DB29_04091 35e0d0dcbd0926c099965984a3ec0ab1 871 Gene3D G3DSA:1.10.1420.10 256 549 1.4E-103 T 14-10-2018 DB29_04091 35e0d0dcbd0926c099965984a3ec0ab1 871 PIRSF PIRSF037677 160 847 7.3E-132 T 14-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 DB29_04091 35e0d0dcbd0926c099965984a3ec0ab1 871 PIRSF PIRSF037677 1 160 4.8E-34 T 14-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 DB29_04091 35e0d0dcbd0926c099965984a3ec0ab1 871 Pfam PF05192 MutS domain III 260 549 3.0E-43 T 14-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 DB29_04091 35e0d0dcbd0926c099965984a3ec0ab1 871 SUPERFAMILY SSF52540 557 789 2.33E-64 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_04091 35e0d0dcbd0926c099965984a3ec0ab1 871 Gene3D G3DSA:3.30.420.110 124 249 9.8E-14 T 14-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 DB29_04091 35e0d0dcbd0926c099965984a3ec0ab1 871 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 5 861 25.139 T 14-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 DB29_04091 35e0d0dcbd0926c099965984a3ec0ab1 871 SMART SM00533 274 581 4.0E-104 T 14-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 DB29_04091 35e0d0dcbd0926c099965984a3ec0ab1 871 SUPERFAMILY SSF55271 5 112 6.15E-44 T 14-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 DB29_04091 35e0d0dcbd0926c099965984a3ec0ab1 871 Pfam PF00488 MutS domain V 602 788 1.4E-82 T 14-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 DB29_04091 35e0d0dcbd0926c099965984a3ec0ab1 871 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 679 695 - T 14-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 DB29_02250 f5812fbc83e45410ddb6154c5533949a 493 SMART SM00487 21 219 1.2E-59 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DB29_02250 f5812fbc83e45410ddb6154c5533949a 493 Gene3D G3DSA:3.40.50.300 210 440 4.1E-55 T 14-10-2018 DB29_02250 f5812fbc83e45410ddb6154c5533949a 493 SMART SM00490 255 336 9.6E-37 T 14-10-2018 IPR001650 Helicase, C-terminal DB29_02250 f5812fbc83e45410ddb6154c5533949a 493 Gene3D G3DSA:3.40.50.300 1 208 4.2E-77 T 14-10-2018 DB29_02250 f5812fbc83e45410ddb6154c5533949a 493 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 149 157 - T 14-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site DB29_02250 f5812fbc83e45410ddb6154c5533949a 493 Pfam PF00271 Helicase conserved C-terminal domain 228 336 6.3E-31 T 14-10-2018 IPR001650 Helicase, C-terminal DB29_02250 f5812fbc83e45410ddb6154c5533949a 493 Pfam PF00270 DEAD/DEAH box helicase 26 191 3.0E-49 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 DB29_02250 f5812fbc83e45410ddb6154c5533949a 493 SUPERFAMILY SSF52540 72 356 3.71E-76 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_04002 32e699509ecffb4637fb599c661a7a10 181 Gene3D G3DSA:3.60.20.10 3 180 5.8E-68 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DB29_04002 32e699509ecffb4637fb599c661a7a10 181 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 6 179 40.751 T 14-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 DB29_04002 32e699509ecffb4637fb599c661a7a10 181 SUPERFAMILY SSF56235 4 179 1.04E-59 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DB29_04002 32e699509ecffb4637fb599c661a7a10 181 PIRSF PIRSF039093 1 181 1.7E-83 T 14-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 DB29_04002 32e699509ecffb4637fb599c661a7a10 181 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 7 179 3.0E-82 T 14-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 DB29_04002 32e699509ecffb4637fb599c661a7a10 181 Pfam PF00227 Proteasome subunit 5 177 3.3E-27 T 14-10-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8939236|Reactome: R-HSA-8939902|Reactome: R-HSA-8941858|Reactome: R-HSA-8948751|Reactome: R-HSA-8951664|Reactome: R-HSA-9010553|Reactome: R-HSA-9020702|Reactome: R-HSA-9604323|Reactome: R-HSA-983168 DB29_01991 475ffdc14ba421e5c4319f4236727a61 543 Pfam PF12848 ABC transporter 230 321 3.4E-23 T 14-10-2018 IPR032781 ABC-transporter extension domain DB29_01991 475ffdc14ba421e5c4319f4236727a61 543 Gene3D G3DSA:3.40.50.300 2 285 2.0E-64 T 14-10-2018 DB29_01991 475ffdc14ba421e5c4319f4236727a61 543 SUPERFAMILY SSF52540 319 527 1.42E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_01991 475ffdc14ba421e5c4319f4236727a61 543 Gene3D G3DSA:3.40.50.300 297 543 1.0E-59 T 14-10-2018 DB29_01991 475ffdc14ba421e5c4319f4236727a61 543 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB29_01991 475ffdc14ba421e5c4319f4236727a61 543 Pfam PF00005 ABC transporter 350 478 3.9E-22 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB29_01991 475ffdc14ba421e5c4319f4236727a61 543 SMART SM00382 28 236 6.2E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_01991 475ffdc14ba421e5c4319f4236727a61 543 SMART SM00382 358 541 5.9E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_01991 475ffdc14ba421e5c4319f4236727a61 543 ProSitePatterns PS00211 ABC transporters family signature. 450 464 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB29_01991 475ffdc14ba421e5c4319f4236727a61 543 Pfam PF00005 ABC transporter 20 191 5.0E-25 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB29_01991 475ffdc14ba421e5c4319f4236727a61 543 SUPERFAMILY SSF52540 6 270 2.21E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_01972 cfb2897f192ab3c0040498d40cfeaaf4 218 SUPERFAMILY SSF50715 9 181 8.72E-55 T 14-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 DB29_01972 cfb2897f192ab3c0040498d40cfeaaf4 218 TIGRFAM TIGR00731 bL25_bact_ctc: ribosomal protein bL25, Ctc-form 4 179 9.2E-49 T 14-10-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 DB29_01972 cfb2897f192ab3c0040498d40cfeaaf4 218 Pfam PF01386 Ribosomal L25p family 4 91 3.9E-22 T 14-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 DB29_01972 cfb2897f192ab3c0040498d40cfeaaf4 218 Hamap MF_01334 50S ribosomal protein L25 [rplY]. 2 182 27.396 T 14-10-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 DB29_01972 cfb2897f192ab3c0040498d40cfeaaf4 218 Gene3D G3DSA:2.170.120.20 96 188 2.2E-29 T 14-10-2018 IPR037121 Ribosomal protein L25, C-terminal DB29_01972 cfb2897f192ab3c0040498d40cfeaaf4 218 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 4 94 6.0E-48 T 14-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 DB29_01972 cfb2897f192ab3c0040498d40cfeaaf4 218 Pfam PF14693 Ribosomal protein TL5, C-terminal domain 101 181 1.5E-28 T 14-10-2018 IPR020057 Ribosomal protein L25, beta domain DB29_01972 cfb2897f192ab3c0040498d40cfeaaf4 218 Gene3D G3DSA:2.40.240.10 2 94 7.0E-26 T 14-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 DB29_02675 24f57545a3a3a42e143c5e106f941692 322 Gene3D G3DSA:3.40.1180.10 77 322 4.2E-53 T 14-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 DB29_02675 24f57545a3a3a42e143c5e106f941692 322 SUPERFAMILY SSF64005 86 317 4.32E-36 T 14-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 DB29_02675 24f57545a3a3a42e143c5e106f941692 322 Pfam PF01255 Putative undecaprenyl diphosphate synthase 91 321 3.9E-37 T 14-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 DB29_02330 4233741e627b6fa4e55a02557f33c7d1 269 Pfam PF06877 Regulator of ribonuclease activity B 167 261 7.9E-19 T 14-10-2018 IPR009671 Regulator of ribonuclease activity B domain DB29_02330 4233741e627b6fa4e55a02557f33c7d1 269 SUPERFAMILY SSF89946 154 264 1.83E-24 T 14-10-2018 IPR036701 RraB-like superfamily DB29_02330 4233741e627b6fa4e55a02557f33c7d1 269 Gene3D G3DSA:3.30.70.970 160 269 2.1E-8 T 14-10-2018 IPR036701 RraB-like superfamily DB29_03956 49fdda155e908dd509e1b872c0f0c83a 313 Gene3D G3DSA:3.10.25.10 204 311 2.1E-32 T 14-10-2018 IPR037022 Formyl transferase, C-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 DB29_03956 49fdda155e908dd509e1b872c0f0c83a 313 Pfam PF02911 Formyl transferase, C-terminal domain 201 299 4.8E-28 T 14-10-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 DB29_03956 49fdda155e908dd509e1b872c0f0c83a 313 SUPERFAMILY SSF50486 202 301 6.28E-32 T 14-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 DB29_03956 49fdda155e908dd509e1b872c0f0c83a 313 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 2 302 36.109 T 14-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 DB29_03956 49fdda155e908dd509e1b872c0f0c83a 313 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 130 153 - T 14-10-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 DB29_03956 49fdda155e908dd509e1b872c0f0c83a 313 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 2 304 1.2E-103 T 14-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 DB29_03956 49fdda155e908dd509e1b872c0f0c83a 313 Gene3D G3DSA:3.40.50.170 1 203 6.3E-81 T 14-10-2018 DB29_03956 49fdda155e908dd509e1b872c0f0c83a 313 Pfam PF00551 Formyl transferase 3 174 3.2E-39 T 14-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 DB29_03956 49fdda155e908dd509e1b872c0f0c83a 313 SUPERFAMILY SSF53328 2 203 4.84E-65 T 14-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 DB29_02326 0cdacd4e439b0c93ef70ee280a3c3cf4 288 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 27 274 8.8E-87 T 14-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 DB29_02326 0cdacd4e439b0c93ef70ee280a3c3cf4 288 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 5 278 40.593 T 14-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 DB29_02326 0cdacd4e439b0c93ef70ee280a3c3cf4 288 Pfam PF05175 Methyltransferase small domain 103 188 1.2E-17 T 14-10-2018 IPR007848 Methyltransferase small domain GO:0008168 DB29_02326 0cdacd4e439b0c93ef70ee280a3c3cf4 288 SUPERFAMILY SSF53335 4 275 2.24E-54 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DB29_02326 0cdacd4e439b0c93ef70ee280a3c3cf4 288 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 181 187 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 DB29_02326 0cdacd4e439b0c93ef70ee280a3c3cf4 288 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 4 275 8.5E-70 T 14-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 DB29_02326 0cdacd4e439b0c93ef70ee280a3c3cf4 288 Gene3D G3DSA:1.10.8.10 3 85 2.0E-13 T 14-10-2018 DB29_02326 0cdacd4e439b0c93ef70ee280a3c3cf4 288 Gene3D G3DSA:3.40.50.150 86 282 2.5E-63 T 14-10-2018 DB29_02551 fd6aa6ed6207ef45c75bdd3926001506 361 SUPERFAMILY SSF50891 243 356 7.59E-39 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily DB29_02551 fd6aa6ed6207ef45c75bdd3926001506 361 Gene3D G3DSA:3.20.20.70 1 239 4.9E-95 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DB29_02551 fd6aa6ed6207ef45c75bdd3926001506 361 Gene3D G3DSA:2.40.100.10 240 358 8.4E-41 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily DB29_02551 fd6aa6ed6207ef45c75bdd3926001506 361 Pfam PF05913 Bacterial protein of unknown function (DUF871) 3 356 9.1E-148 T 14-10-2018 IPR008589 Protein of unknown function DUF871, prokaryotic DB29_02551 fd6aa6ed6207ef45c75bdd3926001506 361 SUPERFAMILY SSF51445 1 240 4.63E-96 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily DB29_02062 d4dee9a09ed878e1cddd0c6f6aeadac8 285 Hamap MF_01811 Membrane protein insertase YidC [yidC]. 2 241 29.903 T 14-10-2018 IPR023060 Membrane insertase YidC/YidC1/YidC2, Firmicutes GO:0016021|GO:0032977 DB29_02062 d4dee9a09ed878e1cddd0c6f6aeadac8 285 Pfam PF02096 60Kd inner membrane protein 58 237 2.2E-57 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 DB29_02062 d4dee9a09ed878e1cddd0c6f6aeadac8 285 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 57 237 1.2E-63 T 14-10-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB29_01304 8bd51eadc707f37cd861da7ba020bd31 239 SUPERFAMILY SSF52540 1 224 9.63E-70 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_01304 8bd51eadc707f37cd861da7ba020bd31 239 Gene3D G3DSA:3.40.50.300 1 238 2.7E-73 T 14-10-2018 DB29_01304 8bd51eadc707f37cd861da7ba020bd31 239 SMART SM00382 30 218 5.6E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_01304 8bd51eadc707f37cd861da7ba020bd31 239 Pfam PF00005 ABC transporter 21 169 9.5E-40 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB29_01304 8bd51eadc707f37cd861da7ba020bd31 239 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB29_00067 6b0f2f24a5965293f278d37de1061d7e 142 SUPERFAMILY SSF52335 1 134 9.62E-51 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily DB29_00067 6b0f2f24a5965293f278d37de1061d7e 142 PIRSF PIRSF006614 1 139 2.0E-60 T 14-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 DB29_00067 6b0f2f24a5965293f278d37de1061d7e 142 ProSitePatterns PS01335 Methylglyoxal synthase active site. 54 62 - T 14-10-2018 IPR018148 Methylglyoxal synthase, active site GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 DB29_00067 6b0f2f24a5965293f278d37de1061d7e 142 SMART SM00851 14 107 1.2E-18 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain DB29_00067 6b0f2f24a5965293f278d37de1061d7e 142 Hamap MF_00549 Methylglyoxal synthase [mgsA]. 1 120 32.848 T 14-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 DB29_00067 6b0f2f24a5965293f278d37de1061d7e 142 TIGRFAM TIGR00160 MGSA: methylglyoxal synthase 1 123 6.7E-58 T 14-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 DB29_00067 6b0f2f24a5965293f278d37de1061d7e 142 Pfam PF02142 MGS-like domain 15 107 2.5E-15 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain DB29_00067 6b0f2f24a5965293f278d37de1061d7e 142 Gene3D G3DSA:3.40.50.1380 1 140 4.1E-53 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily DB29_02992 9a2db5ba80507ef8d622efdb152db068 308 Gene3D G3DSA:1.10.10.60 192 241 1.2E-10 T 14-10-2018 DB29_02992 9a2db5ba80507ef8d622efdb152db068 308 SUPERFAMILY SSF46689 192 240 1.68E-6 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DB29_02992 9a2db5ba80507ef8d622efdb152db068 308 SUPERFAMILY SSF51182 16 135 2.92E-15 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily DB29_02992 9a2db5ba80507ef8d622efdb152db068 308 SMART SM00342 209 292 5.3E-24 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DB29_02992 9a2db5ba80507ef8d622efdb152db068 308 Gene3D G3DSA:2.60.120.10 4 106 1.3E-15 T 14-10-2018 IPR014710 RmlC-like jelly roll fold DB29_02992 9a2db5ba80507ef8d622efdb152db068 308 Gene3D G3DSA:1.10.10.60 242 299 1.4E-15 T 14-10-2018 DB29_02992 9a2db5ba80507ef8d622efdb152db068 308 SUPERFAMILY SSF46689 245 297 2.19E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DB29_02992 9a2db5ba80507ef8d622efdb152db068 308 Pfam PF12833 Helix-turn-helix domain 216 294 4.5E-18 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DB29_02992 9a2db5ba80507ef8d622efdb152db068 308 Pfam PF02311 AraC-like ligand binding domain 31 117 1.6E-12 T 14-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 DB29_01773 3a8ab43aa3b56054e462f792c7e8a981 511 PIRSF PIRSF017184 1 510 8.2E-136 T 14-10-2018 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 DB29_01773 3a8ab43aa3b56054e462f792c7e8a981 511 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 5 212 24.343 T 14-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 DB29_01773 3a8ab43aa3b56054e462f792c7e8a981 511 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 4 213 5.9E-49 T 14-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 DB29_01773 3a8ab43aa3b56054e462f792c7e8a981 511 Gene3D G3DSA:3.40.50.10260 2 219 5.0E-61 T 14-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 DB29_01773 3a8ab43aa3b56054e462f792c7e8a981 511 Gene3D G3DSA:3.40.1190.20 227 510 7.4E-76 T 14-10-2018 IPR029056 Ribokinase-like DB29_01773 3a8ab43aa3b56054e462f792c7e8a981 511 Pfam PF01256 Carbohydrate kinase 250 502 1.5E-54 T 14-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 DB29_01773 3a8ab43aa3b56054e462f792c7e8a981 511 SUPERFAMILY SSF64153 1 249 5.36E-61 T 14-10-2018 IPR036652 YjeF N-terminal domain superfamily MetaCyc: PWY-6938 DB29_01773 3a8ab43aa3b56054e462f792c7e8a981 511 Pfam PF03853 YjeF-related protein N-terminus 25 189 8.5E-44 T 14-10-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 DB29_01773 3a8ab43aa3b56054e462f792c7e8a981 511 SUPERFAMILY SSF53613 224 505 1.93E-62 T 14-10-2018 IPR029056 Ribokinase-like DB29_01773 3a8ab43aa3b56054e462f792c7e8a981 511 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 238 505 6.0E-62 T 14-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 DB29_01773 3a8ab43aa3b56054e462f792c7e8a981 511 ProSitePatterns PS01049 YjeF C-terminal domain signature 1. 325 335 - T 14-10-2018 IPR017953 Carbohydrate kinase, predicted, conserved site DB29_01773 3a8ab43aa3b56054e462f792c7e8a981 511 ProSitePatterns PS01050 YjeF C-terminal domain signature 2. 445 455 - T 14-10-2018 IPR017953 Carbohydrate kinase, predicted, conserved site DB29_01773 3a8ab43aa3b56054e462f792c7e8a981 511 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 228 510 21.255 T 14-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 DB29_01891 343e45c329a537eae814583a5f470c83 102 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 38 101 8.1E-32 T 14-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB29_01891 343e45c329a537eae814583a5f470c83 102 Gene3D G3DSA:2.30.30.30 1 100 9.4E-44 T 14-10-2018 IPR014722 Ribosomal protein L2, domain 2 DB29_01891 343e45c329a537eae814583a5f470c83 102 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 1 95 23.154 T 14-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB29_01891 343e45c329a537eae814583a5f470c83 102 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 1 101 2.4E-42 T 14-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB29_01891 343e45c329a537eae814583a5f470c83 102 ProSitePatterns PS01108 Ribosomal protein L24 signature. 6 23 - T 14-10-2018 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 DB29_01891 343e45c329a537eae814583a5f470c83 102 Pfam PF00467 KOW motif 5 36 4.1E-9 T 14-10-2018 IPR005824 KOW DB29_01891 343e45c329a537eae814583a5f470c83 102 SMART SM00739 2 29 1.7E-6 T 14-10-2018 IPR005824 KOW DB29_01891 343e45c329a537eae814583a5f470c83 102 SUPERFAMILY SSF50104 1 100 7.52E-41 T 14-10-2018 IPR008991 Translation protein SH3-like domain superfamily DB29_04118 1c2d33390d722ba464ad13b9e25e82ac 79 Gene3D G3DSA:1.10.287.540 1 58 2.1E-20 T 14-10-2018 DB29_04118 1c2d33390d722ba464ad13b9e25e82ac 79 Pfam PF05979 Bacterial protein of unknown function (DUF896) 5 68 1.5E-29 T 14-10-2018 IPR009242 Protein of unknown function DUF896 DB29_04118 1c2d33390d722ba464ad13b9e25e82ac 79 SUPERFAMILY SSF158221 1 42 2.09E-12 T 14-10-2018 DB29_04118 1c2d33390d722ba464ad13b9e25e82ac 79 Hamap MF_01103 UPF0291 protein . 2 60 14.404 T 14-10-2018 IPR009242 Protein of unknown function DUF896 DB29_00055 0447fc6a371f89b45a58cb53a0403fef 362 Gene3D G3DSA:1.10.101.10 30 102 1.8E-17 T 14-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 DB29_00055 0447fc6a371f89b45a58cb53a0403fef 362 Gene3D G3DSA:1.10.101.10 103 175 1.9E-23 T 14-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 DB29_00055 0447fc6a371f89b45a58cb53a0403fef 362 Pfam PF06725 3D domain 301 361 1.1E-20 T 14-10-2018 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 DB29_00055 0447fc6a371f89b45a58cb53a0403fef 362 Pfam PF01471 Putative peptidoglycan binding domain 44 101 9.0E-13 T 14-10-2018 IPR002477 Peptidoglycan binding-like DB29_00055 0447fc6a371f89b45a58cb53a0403fef 362 Pfam PF01471 Putative peptidoglycan binding domain 110 165 6.7E-17 T 14-10-2018 IPR002477 Peptidoglycan binding-like DB29_00055 0447fc6a371f89b45a58cb53a0403fef 362 SUPERFAMILY SSF47090 104 166 4.91E-19 T 14-10-2018 IPR036365 PGBD-like superfamily DB29_00055 0447fc6a371f89b45a58cb53a0403fef 362 Gene3D G3DSA:2.40.40.10 217 354 3.5E-5 T 14-10-2018 IPR036908 RlpA-like domain superfamily DB29_00055 0447fc6a371f89b45a58cb53a0403fef 362 SUPERFAMILY SSF47090 35 101 7.59E-16 T 14-10-2018 IPR036365 PGBD-like superfamily DB29_00055 0447fc6a371f89b45a58cb53a0403fef 362 SUPERFAMILY SSF50685 302 344 2.55E-7 T 14-10-2018 IPR036908 RlpA-like domain superfamily DB29_03359 004560bcd8b1339bc43c18ac11797667 346 Gene3D G3DSA:3.90.1200.10 106 323 3.9E-20 T 14-10-2018 DB29_03359 004560bcd8b1339bc43c18ac11797667 346 TIGRFAM TIGR02905 spore_yutH: spore coat protein YutH 3 323 1.4E-146 T 14-10-2018 IPR014254 Spore coat protein YutH DB29_03359 004560bcd8b1339bc43c18ac11797667 346 SUPERFAMILY SSF56112 46 307 4.95E-7 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily DB29_00960 71e70b628b67a916a54aedbd834f212b 83 SUPERFAMILY SSF82697 1 79 5.93E-29 T 14-10-2018 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 DB29_00960 71e70b628b67a916a54aedbd834f212b 83 ProDom PD010362 PHOSPHORIBOSYLFORMYLGLYCINAMIDINE PURS SYNTHETASE SYNTHASE COMPONENT SYNTHASE LIGASE FGAM UPF0062 I 10 79 3.0E-34 T 14-10-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 DB29_00960 71e70b628b67a916a54aedbd834f212b 83 Hamap MF_01926 Phosphoribosylformylglycinamidine synthase subunit PurS [purS]. 2 77 22.211 T 14-10-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 DB29_00960 71e70b628b67a916a54aedbd834f212b 83 Pfam PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase 3 77 1.9E-33 T 14-10-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 DB29_00960 71e70b628b67a916a54aedbd834f212b 83 TIGRFAM TIGR00302 TIGR00302: phosphoribosylformylglycinamidine synthase, purS protein 2 79 9.7E-34 T 14-10-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 DB29_00960 71e70b628b67a916a54aedbd834f212b 83 Gene3D G3DSA:3.30.1280.10 1 83 4.6E-36 T 14-10-2018 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 DB29_00446 63b11789819ea7a97b0ae51e5a105ae3 240 Gene3D G3DSA:3.40.50.880 1 239 1.1E-115 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like DB29_00446 63b11789819ea7a97b0ae51e5a105ae3 240 Pfam PF06283 Trehalose utilisation 2 216 4.9E-36 T 14-10-2018 IPR029010 ThuA-like domain DB29_00446 63b11789819ea7a97b0ae51e5a105ae3 240 SUPERFAMILY SSF52317 2 234 1.14E-63 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like DB29_00446 63b11789819ea7a97b0ae51e5a105ae3 240 PIRSF PIRSF030013 1 237 2.6E-127 T 14-10-2018 IPR009381 Trehalose catabolism protein, ThuA, prokaryote DB29_00820 cc869c8423e7f174cc10b95749383039 206 Pfam PF01613 Flavin reductase like domain 20 194 2.6E-9 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 DB29_00820 cc869c8423e7f174cc10b95749383039 206 SUPERFAMILY SSF50475 13 199 1.2E-30 T 14-10-2018 DB29_00820 cc869c8423e7f174cc10b95749383039 206 Gene3D G3DSA:2.30.110.10 9 206 8.1E-37 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 DB29_00177 aeaa32ebf69ec13f5622e19d5d8cd12e 154 SUPERFAMILY SSF140663 1 117 1.7E-25 T 14-10-2018 IPR023203 TTHA0068-like superfamily DB29_00177 aeaa32ebf69ec13f5622e19d5d8cd12e 154 Gene3D G3DSA:1.20.58.500 4 101 5.7E-14 T 14-10-2018 DB29_00177 aeaa32ebf69ec13f5622e19d5d8cd12e 154 Pfam PF03745 Domain of unknown function (DUF309) 7 65 1.4E-21 T 14-10-2018 IPR005500 Protein of unknown function DUF309 DB29_01995 5d408176a90ed71af598c8f3fa8f2776 655 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 6 522 2.1E-178 T 14-10-2018 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 DB29_01995 5d408176a90ed71af598c8f3fa8f2776 655 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 538 655 1.7E-43 T 14-10-2018 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 DB29_01995 5d408176a90ed71af598c8f3fa8f2776 655 Gene3D G3DSA:3.40.50.620 6 343 6.0E-152 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DB29_01995 5d408176a90ed71af598c8f3fa8f2776 655 Pfam PF09334 tRNA synthetases class I (M) 6 372 6.9E-119 T 14-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 DB29_01995 5d408176a90ed71af598c8f3fa8f2776 655 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 15 24 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 DB29_01995 5d408176a90ed71af598c8f3fa8f2776 655 Gene3D G3DSA:2.40.50.140 545 655 1.5E-34 T 14-10-2018 DB29_01995 5d408176a90ed71af598c8f3fa8f2776 655 SUPERFAMILY SSF47323 362 567 2.62E-49 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 DB29_01995 5d408176a90ed71af598c8f3fa8f2776 655 Gene3D G3DSA:2.170.220.10 117 237 6.0E-152 T 14-10-2018 DB29_01995 5d408176a90ed71af598c8f3fa8f2776 655 Pfam PF08264 Anticodon-binding domain of tRNA 395 533 3.4E-11 T 14-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 DB29_01995 5d408176a90ed71af598c8f3fa8f2776 655 SUPERFAMILY SSF50249 554 654 2.69E-32 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DB29_01995 5d408176a90ed71af598c8f3fa8f2776 655 PRINTS PR01041 Methionyl-tRNA synthetase signature 268 283 1.2E-33 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 DB29_01995 5d408176a90ed71af598c8f3fa8f2776 655 PRINTS PR01041 Methionyl-tRNA synthetase signature 88 99 1.2E-33 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 DB29_01995 5d408176a90ed71af598c8f3fa8f2776 655 PRINTS PR01041 Methionyl-tRNA synthetase signature 360 371 1.2E-33 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 DB29_01995 5d408176a90ed71af598c8f3fa8f2776 655 PRINTS PR01041 Methionyl-tRNA synthetase signature 8 21 1.2E-33 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 DB29_01995 5d408176a90ed71af598c8f3fa8f2776 655 PRINTS PR01041 Methionyl-tRNA synthetase signature 40 54 1.2E-33 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 DB29_01995 5d408176a90ed71af598c8f3fa8f2776 655 PRINTS PR01041 Methionyl-tRNA synthetase signature 235 246 1.2E-33 T 14-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 DB29_01995 5d408176a90ed71af598c8f3fa8f2776 655 Pfam PF01588 Putative tRNA binding domain 561 652 1.1E-26 T 14-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 DB29_01995 5d408176a90ed71af598c8f3fa8f2776 655 Gene3D G3DSA:1.10.730.10 350 527 2.7E-55 T 14-10-2018 DB29_01995 5d408176a90ed71af598c8f3fa8f2776 655 Hamap MF_01228 Methionine--tRNA ligase [metG]. 2 520 51.64 T 14-10-2018 IPR023457 Methionine-tRNA synthetase, type 2 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 DB29_01995 5d408176a90ed71af598c8f3fa8f2776 655 SUPERFAMILY SSF52374 3 359 4.22E-118 T 14-10-2018 DB29_03048 fcc774389b646c1b3d4d73733f9f3b36 809 SUPERFAMILY SSF55008 5 71 8.12E-21 T 14-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 DB29_03048 fcc774389b646c1b3d4d73733f9f3b36 809 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 497 503 - T 14-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 DB29_03048 fcc774389b646c1b3d4d73733f9f3b36 809 Pfam PF00403 Heavy-metal-associated domain 75 136 3.1E-16 T 14-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 DB29_03048 fcc774389b646c1b3d4d73733f9f3b36 809 Pfam PF00403 Heavy-metal-associated domain 8 67 5.2E-17 T 14-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 DB29_03048 fcc774389b646c1b3d4d73733f9f3b36 809 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 207 797 2.7E-180 T 14-10-2018 DB29_03048 fcc774389b646c1b3d4d73733f9f3b36 809 Gene3D G3DSA:2.70.150.20 286 398 2.3E-40 T 14-10-2018 DB29_03048 fcc774389b646c1b3d4d73733f9f3b36 809 Gene3D G3DSA:3.30.70.100 1 72 3.1E-22 T 14-10-2018 DB29_03048 fcc774389b646c1b3d4d73733f9f3b36 809 ProSitePatterns PS01047 Heavy-metal-associated domain. 10 39 - T 14-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 DB29_03048 fcc774389b646c1b3d4d73733f9f3b36 809 SUPERFAMILY SSF81653 297 393 6.41E-28 T 14-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 DB29_03048 fcc774389b646c1b3d4d73733f9f3b36 809 Pfam PF00122 E1-E2 ATPase 294 474 1.7E-56 T 14-10-2018 DB29_03048 fcc774389b646c1b3d4d73733f9f3b36 809 PRINTS PR00943 Copper-transporting ATPase signature 671 688 1.1E-17 T 14-10-2018 DB29_03048 fcc774389b646c1b3d4d73733f9f3b36 809 PRINTS PR00943 Copper-transporting ATPase signature 117 137 1.1E-17 T 14-10-2018 DB29_03048 fcc774389b646c1b3d4d73733f9f3b36 809 PRINTS PR00943 Copper-transporting ATPase signature 263 282 1.1E-17 T 14-10-2018 DB29_03048 fcc774389b646c1b3d4d73733f9f3b36 809 PRINTS PR00943 Copper-transporting ATPase signature 88 102 1.1E-17 T 14-10-2018 DB29_03048 fcc774389b646c1b3d4d73733f9f3b36 809 PRINTS PR00943 Copper-transporting ATPase signature 210 229 1.1E-17 T 14-10-2018 DB29_03048 fcc774389b646c1b3d4d73733f9f3b36 809 PRINTS PR00943 Copper-transporting ATPase signature 416 430 1.1E-17 T 14-10-2018 DB29_03048 fcc774389b646c1b3d4d73733f9f3b36 809 PRINTS PR00943 Copper-transporting ATPase signature 478 493 1.1E-17 T 14-10-2018 DB29_03048 fcc774389b646c1b3d4d73733f9f3b36 809 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 74 138 3.5E-10 T 14-10-2018 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 Reactome: R-HSA-936837 DB29_03048 fcc774389b646c1b3d4d73733f9f3b36 809 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 5 69 7.3E-12 T 14-10-2018 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 Reactome: R-HSA-936837 DB29_03048 fcc774389b646c1b3d4d73733f9f3b36 809 ProSitePatterns PS01047 Heavy-metal-associated domain. 78 107 - T 14-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 DB29_03048 fcc774389b646c1b3d4d73733f9f3b36 809 SUPERFAMILY SSF81665 236 773 1.05E-9 T 14-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 DB29_03048 fcc774389b646c1b3d4d73733f9f3b36 809 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 641 651 6.3E-26 T 14-10-2018 DB29_03048 fcc774389b646c1b3d4d73733f9f3b36 809 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 495 509 6.3E-26 T 14-10-2018 DB29_03048 fcc774389b646c1b3d4d73733f9f3b36 809 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 694 713 6.3E-26 T 14-10-2018 DB29_03048 fcc774389b646c1b3d4d73733f9f3b36 809 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 619 630 6.3E-26 T 14-10-2018 DB29_03048 fcc774389b646c1b3d4d73733f9f3b36 809 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 717 729 6.3E-26 T 14-10-2018 DB29_03048 fcc774389b646c1b3d4d73733f9f3b36 809 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 343 357 6.3E-26 T 14-10-2018 DB29_03048 fcc774389b646c1b3d4d73733f9f3b36 809 Gene3D G3DSA:3.40.1110.10 506 626 9.2E-94 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 DB29_03048 fcc774389b646c1b3d4d73733f9f3b36 809 Pfam PF00702 haloacid dehalogenase-like hydrolase 491 708 2.6E-46 T 14-10-2018 DB29_03048 fcc774389b646c1b3d4d73733f9f3b36 809 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 265 778 2.0E-87 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 DB29_03048 fcc774389b646c1b3d4d73733f9f3b36 809 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 225 796 3.0E-194 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 DB29_03048 fcc774389b646c1b3d4d73733f9f3b36 809 PRINTS PR00942 Copper-transporting ATPase 1 signature 208 233 1.7E-10 T 14-10-2018 DB29_03048 fcc774389b646c1b3d4d73733f9f3b36 809 PRINTS PR00942 Copper-transporting ATPase 1 signature 5 30 1.7E-10 T 14-10-2018 DB29_03048 fcc774389b646c1b3d4d73733f9f3b36 809 SUPERFAMILY SSF56784 493 794 6.6E-60 T 14-10-2018 IPR036412 HAD-like superfamily DB29_03048 fcc774389b646c1b3d4d73733f9f3b36 809 Gene3D G3DSA:3.30.70.100 73 144 3.8E-22 T 14-10-2018 DB29_03048 fcc774389b646c1b3d4d73733f9f3b36 809 Gene3D G3DSA:3.40.50.1000 476 746 9.2E-94 T 14-10-2018 IPR023214 HAD superfamily DB29_03048 fcc774389b646c1b3d4d73733f9f3b36 809 ProSitePatterns PS01229 Hypothetical cof family signature 2. 694 716 - T 14-10-2018 DB29_03048 fcc774389b646c1b3d4d73733f9f3b36 809 SUPERFAMILY SSF55008 72 138 2.62E-20 T 14-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 DB29_04353 2ea57d8c2615893286eb4240f40ea93e 105 SUPERFAMILY SSF160459 40 94 1.57E-5 T 14-10-2018 DB29_04353 2ea57d8c2615893286eb4240f40ea93e 105 PIRSF PIRSF029938 1 105 8.5E-41 T 14-10-2018 IPR011229 Cell cycle protein GpsB DB29_04353 2ea57d8c2615893286eb4240f40ea93e 105 Hamap MF_02011 Cell cycle protein GpsB [gpsB]. 1 101 22.977 T 14-10-2018 IPR011229 Cell cycle protein GpsB DB29_04353 2ea57d8c2615893286eb4240f40ea93e 105 Pfam PF05103 DivIVA protein 8 71 7.3E-17 T 14-10-2018 IPR007793 DivIVA family DB29_04353 2ea57d8c2615893286eb4240f40ea93e 105 TIGRFAM TIGR03544 DivI1A_domain: DivIVA domain 8 41 4.3E-16 T 14-10-2018 IPR019933 DivIVA domain DB29_02995 7d54321150ecaeaa8b5954385ca7382b 434 SUPERFAMILY SSF53850 45 429 4.2E-78 T 14-10-2018 DB29_02995 7d54321150ecaeaa8b5954385ca7382b 434 Gene3D G3DSA:3.40.190.10 164 423 2.8E-105 T 14-10-2018 DB29_02995 7d54321150ecaeaa8b5954385ca7382b 434 Pfam PF13416 Bacterial extracellular solute-binding protein 64 368 9.6E-35 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein DB29_02995 7d54321150ecaeaa8b5954385ca7382b 434 Gene3D G3DSA:3.40.190.10 48 395 2.8E-105 T 14-10-2018 DB29_02587 e3b6a26b7562b15c0654c5575dc9f144 388 Pfam PF04235 Protein of unknown function (DUF418) 219 382 3.8E-33 T 14-10-2018 IPR007349 Domain of unknown function DUF418 DB29_01019 5223402098a495ee61db54254b9713a8 562 SUPERFAMILY SSF55816 308 499 3.92E-62 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DB29_01019 5223402098a495ee61db54254b9713a8 562 SUPERFAMILY SSF54106 513 558 1.7E-7 T 14-10-2018 DB29_01019 5223402098a495ee61db54254b9713a8 562 Gene3D G3DSA:3.60.21.10 22 308 4.4E-85 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like DB29_01019 5223402098a495ee61db54254b9713a8 562 SMART SM00257 513 558 4.6E-7 T 14-10-2018 IPR018392 LysM domain DB29_01019 5223402098a495ee61db54254b9713a8 562 SUPERFAMILY SSF56300 23 308 5.01E-78 T 14-10-2018 DB29_01019 5223402098a495ee61db54254b9713a8 562 Gene3D G3DSA:3.10.350.10 504 562 1.8E-10 T 14-10-2018 IPR036779 LysM domain superfamily DB29_01019 5223402098a495ee61db54254b9713a8 562 Pfam PF00149 Calcineurin-like phosphoesterase 29 235 5.5E-13 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 DB29_01019 5223402098a495ee61db54254b9713a8 562 PRINTS PR01607 Apyrase family signature 365 388 3.3E-33 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DB29_01019 5223402098a495ee61db54254b9713a8 562 PRINTS PR01607 Apyrase family signature 194 211 3.3E-33 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DB29_01019 5223402098a495ee61db54254b9713a8 562 PRINTS PR01607 Apyrase family signature 27 45 3.3E-33 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DB29_01019 5223402098a495ee61db54254b9713a8 562 PRINTS PR01607 Apyrase family signature 247 267 3.3E-33 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DB29_01019 5223402098a495ee61db54254b9713a8 562 PRINTS PR01607 Apyrase family signature 438 457 3.3E-33 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DB29_01019 5223402098a495ee61db54254b9713a8 562 PRINTS PR01607 Apyrase family signature 218 241 3.3E-33 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DB29_01019 5223402098a495ee61db54254b9713a8 562 Pfam PF02872 5'-nucleotidase, C-terminal domain 311 461 1.8E-49 T 14-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DB29_01019 5223402098a495ee61db54254b9713a8 562 Gene3D G3DSA:3.90.780.10 312 503 8.0E-67 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DB29_01019 5223402098a495ee61db54254b9713a8 562 Pfam PF01476 LysM domain 514 558 1.6E-8 T 14-10-2018 IPR018392 LysM domain DB29_03716 dd0a3640c826f5345dc32723df942980 197 Gene3D G3DSA:2.40.10.420 164 197 1.8E-13 T 14-10-2018 DB29_03716 dd0a3640c826f5345dc32723df942980 197 Pfam PF07486 Cell Wall Hydrolase 93 195 1.5E-22 T 14-10-2018 IPR011105 Cell wall hydrolase, SleB GO:0016787 DB29_03716 dd0a3640c826f5345dc32723df942980 197 SMART SM00257 29 72 1.2E-10 T 14-10-2018 IPR018392 LysM domain DB29_03716 dd0a3640c826f5345dc32723df942980 197 Gene3D G3DSA:3.10.350.10 21 79 5.3E-13 T 14-10-2018 IPR036779 LysM domain superfamily DB29_03716 dd0a3640c826f5345dc32723df942980 197 Pfam PF01476 LysM domain 32 72 2.6E-10 T 14-10-2018 IPR018392 LysM domain DB29_03716 dd0a3640c826f5345dc32723df942980 197 SUPERFAMILY SSF54106 28 72 4.97E-9 T 14-10-2018 DB29_03716 dd0a3640c826f5345dc32723df942980 197 Gene3D G3DSA:1.10.10.2520 80 160 2.2E-26 T 14-10-2018 DB29_04107 9af44e9187da492084557f8013e63e2d 727 Gene3D G3DSA:3.20.20.360 8 578 1.6E-272 T 14-10-2018 DB29_04107 9af44e9187da492084557f8013e63e2d 727 Gene3D G3DSA:2.170.170.11 133 262 1.6E-272 T 14-10-2018 IPR023310 Malate synthase G, beta sub-domain GO:0004474 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 DB29_04107 9af44e9187da492084557f8013e63e2d 727 TIGRFAM TIGR01345 malate_syn_G: malate synthase G 4 720 0.0 T 14-10-2018 IPR006253 Malate synthase G GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 DB29_04107 9af44e9187da492084557f8013e63e2d 727 Gene3D G3DSA:1.20.1220.12 581 726 3.2E-73 T 14-10-2018 DB29_04107 9af44e9187da492084557f8013e63e2d 727 Pfam PF01274 Malate synthase 18 695 4.2E-169 T 14-10-2018 IPR001465 Malate synthase GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 DB29_04107 9af44e9187da492084557f8013e63e2d 727 SUPERFAMILY SSF51645 2 720 2.49E-300 T 14-10-2018 IPR011076 Malate synthase-like superfamily GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 DB29_04107 9af44e9187da492084557f8013e63e2d 727 Hamap MF_00641 Malate synthase G [glcB]. 1 727 383.224 T 14-10-2018 IPR006253 Malate synthase G GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 DB29_03461 f922e77cfacd60a032933ca859d9672c 315 SUPERFAMILY SSF52518 3 314 1.36E-98 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold DB29_03461 f922e77cfacd60a032933ca859d9672c 315 Gene3D G3DSA:3.40.50.970 1 315 3.7E-119 T 14-10-2018 DB29_03461 f922e77cfacd60a032933ca859d9672c 315 Pfam PF00676 Dehydrogenase E1 component 12 306 4.3E-90 T 14-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 DB29_03462 4758885729ad4775dc06af14050689e9 347 SMART SM00861 6 198 1.5E-53 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain DB29_03462 4758885729ad4775dc06af14050689e9 347 Pfam PF02780 Transketolase, C-terminal domain 212 334 1.4E-38 T 14-10-2018 IPR033248 Transketolase, C-terminal domain DB29_03462 4758885729ad4775dc06af14050689e9 347 Gene3D G3DSA:3.40.50.920 211 343 2.7E-45 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 DB29_03462 4758885729ad4775dc06af14050689e9 347 SUPERFAMILY SSF52518 4 222 9.82E-62 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold DB29_03462 4758885729ad4775dc06af14050689e9 347 Gene3D G3DSA:3.40.50.970 4 210 4.3E-77 T 14-10-2018 DB29_03462 4758885729ad4775dc06af14050689e9 347 SUPERFAMILY SSF52922 207 341 3.66E-39 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 DB29_03462 4758885729ad4775dc06af14050689e9 347 Pfam PF02779 Transketolase, pyrimidine binding domain 7 198 2.1E-47 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain DB29_01466 2e962373a54aae9b9e31b54d02b4b3a1 363 Gene3D G3DSA:3.20.20.140 57 185 7.5E-28 T 14-10-2018 DB29_01466 2e962373a54aae9b9e31b54d02b4b3a1 363 Gene3D G3DSA:3.20.20.140 193 318 4.9E-36 T 14-10-2018 DB29_01466 2e962373a54aae9b9e31b54d02b4b3a1 363 SUPERFAMILY SSF51338 5 359 1.48E-11 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DB29_01466 2e962373a54aae9b9e31b54d02b4b3a1 363 Gene3D G3DSA:2.30.40.10 319 352 4.9E-36 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DB29_01466 2e962373a54aae9b9e31b54d02b4b3a1 363 Gene3D G3DSA:2.30.40.10 20 56 7.5E-28 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DB29_01466 2e962373a54aae9b9e31b54d02b4b3a1 363 Pfam PF01979 Amidohydrolase family 268 354 8.3E-13 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 DB29_01466 2e962373a54aae9b9e31b54d02b4b3a1 363 SUPERFAMILY SSF51556 88 322 7.57E-19 T 14-10-2018 IPR032466 Metal-dependent hydrolase DB29_00121 230c417bc23d97918f4254c07ba4fe70 319 Gene3D G3DSA:3.40.50.40 208 319 8.8E-21 T 14-10-2018 IPR027473 L-asparaginase, C-terminal Reactome: R-HSA-70614 DB29_00121 230c417bc23d97918f4254c07ba4fe70 319 Pfam PF00710 Asparaginase, N-terminal 3 191 4.4E-54 T 14-10-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 DB29_00121 230c417bc23d97918f4254c07ba4fe70 319 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 6 14 - T 14-10-2018 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 DB29_00121 230c417bc23d97918f4254c07ba4fe70 319 PRINTS PR00139 Asparaginase/glutaminase family signature 253 271 5.5E-15 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 DB29_00121 230c417bc23d97918f4254c07ba4fe70 319 PRINTS PR00139 Asparaginase/glutaminase family signature 4 15 5.5E-15 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 DB29_00121 230c417bc23d97918f4254c07ba4fe70 319 PRINTS PR00139 Asparaginase/glutaminase family signature 80 98 5.5E-15 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 DB29_00121 230c417bc23d97918f4254c07ba4fe70 319 Gene3D G3DSA:3.40.50.1170 1 204 3.6E-61 T 14-10-2018 IPR037152 L-asparaginase, N-terminal domain superfamily Reactome: R-HSA-70614 DB29_00121 230c417bc23d97918f4254c07ba4fe70 319 SUPERFAMILY SSF53774 1 314 4.45E-85 T 14-10-2018 IPR036152 Asparaginase/glutaminase-like superfamily Reactome: R-HSA-70614 DB29_00121 230c417bc23d97918f4254c07ba4fe70 319 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 81 91 - T 14-10-2018 IPR027475 Asparaginase/glutaminase, active site 2 Reactome: R-HSA-70614 DB29_00121 230c417bc23d97918f4254c07ba4fe70 319 PIRSF PIRSF500176 1 317 1.6E-83 T 14-10-2018 DB29_00121 230c417bc23d97918f4254c07ba4fe70 319 SMART SM00870 3 318 2.6E-111 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 DB29_00121 230c417bc23d97918f4254c07ba4fe70 319 PIRSF PIRSF001220 1 317 5.1E-88 T 14-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 DB29_01984 2c65425c2b8d20d3d8b1d2c1f7cc7cce 219 Gene3D G3DSA:3.40.1360.20 30 146 2.4E-23 T 14-10-2018 DB29_01984 2c65425c2b8d20d3d8b1d2c1f7cc7cce 219 Hamap MF_01469 Ribonuclease M5 [rnmV]. 32 209 32.112 T 14-10-2018 IPR004466 Ribonuclease M5 GO:0043822 DB29_01984 2c65425c2b8d20d3d8b1d2c1f7cc7cce 219 SUPERFAMILY SSF110455 31 144 1.36E-33 T 14-10-2018 DB29_01984 2c65425c2b8d20d3d8b1d2c1f7cc7cce 219 Pfam PF13662 Toprim domain 34 99 4.9E-5 T 14-10-2018 IPR006171 TOPRIM domain DB29_01984 2c65425c2b8d20d3d8b1d2c1f7cc7cce 219 TIGRFAM TIGR00334 5S_RNA_mat_M5: ribonuclease M5 32 206 1.6E-49 T 14-10-2018 IPR004466 Ribonuclease M5 GO:0043822 DB29_01984 2c65425c2b8d20d3d8b1d2c1f7cc7cce 219 Pfam PF13331 Domain of unknown function (DUF4093) 122 207 5.7E-28 T 14-10-2018 IPR025156 Ribonuclease M5, C-terminal domain DB29_01984 2c65425c2b8d20d3d8b1d2c1f7cc7cce 219 SMART SM00493 33 106 1.2E-4 T 14-10-2018 IPR006171 TOPRIM domain DB29_02714 343a91a8d688bbeb2ab9c3f70520ea5d 327 Gene3D G3DSA:3.40.50.2300 156 282 3.6E-80 T 14-10-2018 DB29_02714 343a91a8d688bbeb2ab9c3f70520ea5d 327 SUPERFAMILY SSF53822 61 323 1.45E-78 T 14-10-2018 IPR028082 Periplasmic binding protein-like I DB29_02714 343a91a8d688bbeb2ab9c3f70520ea5d 327 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 1.0E-5 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DB29_02714 343a91a8d688bbeb2ab9c3f70520ea5d 327 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 1.0E-5 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DB29_02714 343a91a8d688bbeb2ab9c3f70520ea5d 327 SUPERFAMILY SSF47413 1 59 7.41E-17 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DB29_02714 343a91a8d688bbeb2ab9c3f70520ea5d 327 Gene3D G3DSA:1.10.260.40 3 58 4.5E-22 T 14-10-2018 DB29_02714 343a91a8d688bbeb2ab9c3f70520ea5d 327 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 14-10-2018 DB29_02714 343a91a8d688bbeb2ab9c3f70520ea5d 327 Gene3D G3DSA:3.40.50.2300 62 302 3.6E-80 T 14-10-2018 DB29_02714 343a91a8d688bbeb2ab9c3f70520ea5d 327 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 1.1E-18 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DB29_02714 343a91a8d688bbeb2ab9c3f70520ea5d 327 SMART SM00354 1 71 6.1E-34 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DB29_02714 343a91a8d688bbeb2ab9c3f70520ea5d 327 Pfam PF13377 Periplasmic binding protein-like domain 164 322 4.6E-35 T 14-10-2018 DB29_01729 387bd1c98c6cbbd5083f7d54c295cc20 426 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 236 272 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DB29_01729 387bd1c98c6cbbd5083f7d54c295cc20 426 Gene3D G3DSA:3.40.640.10 58 318 9.5E-110 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DB29_01729 387bd1c98c6cbbd5083f7d54c295cc20 426 SUPERFAMILY SSF53383 11 414 3.17E-109 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DB29_01729 387bd1c98c6cbbd5083f7d54c295cc20 426 TIGRFAM TIGR02407 ectoine_ectB: diaminobutyrate--2-oxoglutarate aminotransferase 7 415 3.0E-207 T 14-10-2018 IPR012773 Ectoine biosynthetic protein GO:0019491|GO:0030170|GO:0047307 KEGG: 00260+2.6.1.76|MetaCyc: PWY-6409|MetaCyc: PWY-6562|MetaCyc: PWY-761|MetaCyc: PWY-7855|MetaCyc: PWY-7988 DB29_01729 387bd1c98c6cbbd5083f7d54c295cc20 426 Pfam PF00202 Aminotransferase class-III 22 412 2.4E-81 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DB29_01729 387bd1c98c6cbbd5083f7d54c295cc20 426 Gene3D G3DSA:3.90.1150.10 13 410 9.5E-110 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DB29_01729 387bd1c98c6cbbd5083f7d54c295cc20 426 PIRSF PIRSF000521 2 130 0.0034 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DB29_01729 387bd1c98c6cbbd5083f7d54c295cc20 426 PIRSF PIRSF000521 124 417 1.4E-32 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DB29_01729 387bd1c98c6cbbd5083f7d54c295cc20 426 TIGRFAM TIGR00709 dat: 2,4-diaminobutyrate 4-transaminase 4 418 4.4E-167 T 14-10-2018 IPR004637 2,4-diaminobutyrate 4-transaminase GO:0008483|GO:0009058 KEGG: 00260+2.6.1.76|MetaCyc: PWY-6409|MetaCyc: PWY-6562|MetaCyc: PWY-761|MetaCyc: PWY-7855|MetaCyc: PWY-7988 DB29_00269 a1f03edc61502a2e0e196cd436a1d5bf 470 Gene3D G3DSA:1.10.275.10 4 137 1.9E-57 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal DB29_00269 a1f03edc61502a2e0e196cd436a1d5bf 470 PRINTS PR00145 Argininosuccinate lyase family signature 173 193 4.1E-7 T 14-10-2018 DB29_00269 a1f03edc61502a2e0e196cd436a1d5bf 470 PRINTS PR00145 Argininosuccinate lyase family signature 315 331 4.1E-7 T 14-10-2018 DB29_00269 a1f03edc61502a2e0e196cd436a1d5bf 470 PRINTS PR00145 Argininosuccinate lyase family signature 132 154 4.1E-7 T 14-10-2018 DB29_00269 a1f03edc61502a2e0e196cd436a1d5bf 470 Pfam PF00206 Lyase 11 340 1.3E-106 T 14-10-2018 IPR022761 Fumarate lyase, N-terminal DB29_00269 a1f03edc61502a2e0e196cd436a1d5bf 470 ProSitePatterns PS00163 Fumarate lyases signature. 315 324 - T 14-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 DB29_00269 a1f03edc61502a2e0e196cd436a1d5bf 470 TIGRFAM TIGR00839 aspA: aspartate ammonia-lyase 4 466 6.7E-212 T 14-10-2018 IPR004708 Aspartate ammonia-lyase GO:0006531|GO:0008797 KEGG: 00250+4.3.1.1 DB29_00269 a1f03edc61502a2e0e196cd436a1d5bf 470 Pfam PF10415 Fumarase C C-terminus 406 459 5.4E-23 T 14-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 DB29_00269 a1f03edc61502a2e0e196cd436a1d5bf 470 Gene3D G3DSA:1.20.200.10 138 405 1.4E-113 T 14-10-2018 DB29_00269 a1f03edc61502a2e0e196cd436a1d5bf 470 PRINTS PR00149 Fumarate lyase superfamily signature 133 151 7.8E-34 T 14-10-2018 IPR000362 Fumarate lyase family DB29_00269 a1f03edc61502a2e0e196cd436a1d5bf 470 PRINTS PR00149 Fumarate lyase superfamily signature 269 296 7.8E-34 T 14-10-2018 IPR000362 Fumarate lyase family DB29_00269 a1f03edc61502a2e0e196cd436a1d5bf 470 PRINTS PR00149 Fumarate lyase superfamily signature 178 196 7.8E-34 T 14-10-2018 IPR000362 Fumarate lyase family DB29_00269 a1f03edc61502a2e0e196cd436a1d5bf 470 PRINTS PR00149 Fumarate lyase superfamily signature 315 331 7.8E-34 T 14-10-2018 IPR000362 Fumarate lyase family DB29_00269 a1f03edc61502a2e0e196cd436a1d5bf 470 Gene3D G3DSA:1.10.40.30 406 457 9.3E-23 T 14-10-2018 DB29_00269 a1f03edc61502a2e0e196cd436a1d5bf 470 SUPERFAMILY SSF48557 3 460 1.35E-148 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 DB29_02557 8afc6d5bb398655eb6c499b1d6ed047b 305 SUPERFAMILY SSF161098 89 291 1.44E-19 T 14-10-2018 IPR035906 MetI-like superfamily DB29_02557 8afc6d5bb398655eb6c499b1d6ed047b 305 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 302 2.3E-41 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DB29_02557 8afc6d5bb398655eb6c499b1d6ed047b 305 Gene3D G3DSA:1.10.3720.10 83 299 3.1E-25 T 14-10-2018 IPR035906 MetI-like superfamily DB29_03316 3916880a900914335a733ee59d5a893e 285 SUPERFAMILY SSF53850 42 284 1.38E-75 T 14-10-2018 DB29_03316 3916880a900914335a733ee59d5a893e 285 Gene3D G3DSA:3.40.190.10 125 233 6.2E-90 T 14-10-2018 DB29_03316 3916880a900914335a733ee59d5a893e 285 Gene3D G3DSA:3.40.190.10 42 282 6.2E-90 T 14-10-2018 DB29_03316 3916880a900914335a733ee59d5a893e 285 PIRSF PIRSF002854 1 285 5.7E-91 T 14-10-2018 IPR004872 Lipoprotein NlpA family DB29_03316 3916880a900914335a733ee59d5a893e 285 Pfam PF03180 NLPA lipoprotein 43 284 2.5E-80 T 14-10-2018 IPR004872 Lipoprotein NlpA family DB29_01339 0e6660b8aa8349a69daf0179a350afa3 297 Pfam PF12833 Helix-turn-helix domain 205 284 1.4E-23 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DB29_01339 0e6660b8aa8349a69daf0179a350afa3 297 SUPERFAMILY SSF46689 235 285 2.62E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DB29_01339 0e6660b8aa8349a69daf0179a350afa3 297 SUPERFAMILY SSF46689 185 233 1.26E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DB29_01339 0e6660b8aa8349a69daf0179a350afa3 297 SMART SM00342 199 282 1.8E-32 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DB29_01339 0e6660b8aa8349a69daf0179a350afa3 297 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 236 278 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 DB29_01339 0e6660b8aa8349a69daf0179a350afa3 297 Pfam PF02311 AraC-like ligand binding domain 46 166 3.2E-10 T 14-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 DB29_01339 0e6660b8aa8349a69daf0179a350afa3 297 SUPERFAMILY SSF51215 18 171 1.28E-12 T 14-10-2018 IPR037923 Transcription regulator HTH-like DB29_01339 0e6660b8aa8349a69daf0179a350afa3 297 Gene3D G3DSA:1.10.10.60 183 232 7.2E-15 T 14-10-2018 DB29_01339 0e6660b8aa8349a69daf0179a350afa3 297 Gene3D G3DSA:1.10.10.60 233 285 2.7E-16 T 14-10-2018 DB29_00421 0d7c353f31a84f2148158583c2035d05 95 Hamap MF_01448 UPF0473 protein . 5 93 19.604 T 14-10-2018 IPR009711 Uncharacterised protein family UPF0473 DB29_00421 0d7c353f31a84f2148158583c2035d05 95 Pfam PF06949 Protein of unknown function (DUF1292) 14 91 2.1E-17 T 14-10-2018 IPR009711 Uncharacterised protein family UPF0473 DB29_02543 0256bbf9002ee7d2649318f5df6b01d2 271 Pfam PF02517 CAAX protease self-immunity 110 202 1.5E-14 T 14-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 DB29_00646 fa03f8f18ac285a6939efbf8bb9a6e53 435 Gene3D G3DSA:3.50.50.60 34 227 1.1E-82 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB29_00646 fa03f8f18ac285a6939efbf8bb9a6e53 435 SUPERFAMILY SSF55424 305 423 1.24E-26 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 DB29_00646 fa03f8f18ac285a6939efbf8bb9a6e53 435 SUPERFAMILY SSF51905 88 300 2.06E-39 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB29_00646 fa03f8f18ac285a6939efbf8bb9a6e53 435 Gene3D G3DSA:3.30.390.30 309 433 9.1E-31 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 DB29_00646 fa03f8f18ac285a6939efbf8bb9a6e53 435 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 186 202 7.1E-8 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DB29_00646 fa03f8f18ac285a6939efbf8bb9a6e53 435 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 254 272 7.1E-8 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DB29_00646 fa03f8f18ac285a6939efbf8bb9a6e53 435 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 220 241 7.1E-8 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DB29_00646 fa03f8f18ac285a6939efbf8bb9a6e53 435 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 86 94 7.1E-8 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DB29_00646 fa03f8f18ac285a6939efbf8bb9a6e53 435 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 285 3.7E-49 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DB29_00646 fa03f8f18ac285a6939efbf8bb9a6e53 435 Gene3D G3DSA:3.50.50.60 2 296 1.1E-82 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB29_00646 fa03f8f18ac285a6939efbf8bb9a6e53 435 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 85 103 5.3E-24 T 14-10-2018 DB29_00646 fa03f8f18ac285a6939efbf8bb9a6e53 435 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 218 234 5.3E-24 T 14-10-2018 DB29_00646 fa03f8f18ac285a6939efbf8bb9a6e53 435 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 244 266 5.3E-24 T 14-10-2018 DB29_00646 fa03f8f18ac285a6939efbf8bb9a6e53 435 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 3 22 5.3E-24 T 14-10-2018 DB29_00646 fa03f8f18ac285a6939efbf8bb9a6e53 435 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 132 150 5.3E-24 T 14-10-2018 DB29_00646 fa03f8f18ac285a6939efbf8bb9a6e53 435 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 314 410 5.5E-11 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 DB29_00646 fa03f8f18ac285a6939efbf8bb9a6e53 435 SUPERFAMILY SSF51905 2 113 3.37E-13 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB29_00981 df412c4e47d596bfc1fdc0b81e99bfc9 428 Pfam PF07690 Major Facilitator Superfamily 25 380 8.8E-16 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DB29_00981 df412c4e47d596bfc1fdc0b81e99bfc9 428 Gene3D G3DSA:1.20.1250.20 16 421 2.3E-25 T 14-10-2018 DB29_00981 df412c4e47d596bfc1fdc0b81e99bfc9 428 SUPERFAMILY SSF103473 22 423 2.75E-34 T 14-10-2018 IPR036259 MFS transporter superfamily DB29_00981 df412c4e47d596bfc1fdc0b81e99bfc9 428 PRINTS PR01036 Tetracycline resistance protein TetB signature 332 352 1.8E-5 T 14-10-2018 DB29_00981 df412c4e47d596bfc1fdc0b81e99bfc9 428 PRINTS PR01036 Tetracycline resistance protein TetB signature 276 300 1.8E-5 T 14-10-2018 DB29_00981 df412c4e47d596bfc1fdc0b81e99bfc9 428 PRINTS PR01036 Tetracycline resistance protein TetB signature 23 47 1.8E-5 T 14-10-2018 DB29_00981 df412c4e47d596bfc1fdc0b81e99bfc9 428 PRINTS PR01036 Tetracycline resistance protein TetB signature 376 395 1.8E-5 T 14-10-2018 DB29_03497 1adbc131f6d3603d793e9c0274fa56e2 258 SUPERFAMILY SSF89550 3 255 1.14E-34 T 14-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 DB29_03497 1adbc131f6d3603d793e9c0274fa56e2 258 TIGRFAM TIGR01856 hisJ_fam: histidinol phosphate phosphatase, HisJ family 4 253 7.8E-66 T 14-10-2018 IPR010140 Histidinol phosphate phosphatase, HisJ GO:0000105|GO:0004401 KEGG: 00340+3.1.3.15 DB29_03497 1adbc131f6d3603d793e9c0274fa56e2 258 Pfam PF02811 PHP domain 5 171 9.1E-12 T 14-10-2018 IPR004013 PHP domain GO:0003824 DB29_03497 1adbc131f6d3603d793e9c0274fa56e2 258 Gene3D G3DSA:3.20.20.140 4 258 1.6E-62 T 14-10-2018 DB29_01362 5f2bf3e8a121807ec8c130d493517501 276 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 91 262 2.5E-18 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DB29_01362 5f2bf3e8a121807ec8c130d493517501 276 Gene3D G3DSA:1.10.3720.10 1 267 3.2E-57 T 14-10-2018 IPR035906 MetI-like superfamily DB29_01362 5f2bf3e8a121807ec8c130d493517501 276 SUPERFAMILY SSF161098 5 275 4.49E-64 T 14-10-2018 IPR035906 MetI-like superfamily DB29_00334 0f29d34a9495ed3d53cdeff00dd203a5 454 Pfam PF01957 NfeD-like C-terminal, partner-binding 293 442 7.5E-19 T 14-10-2018 IPR002810 NfeD-like, C-terminal domain DB29_00334 0f29d34a9495ed3d53cdeff00dd203a5 454 Pfam PF01972 Serine dehydrogenase proteinase 67 127 2.5E-8 T 14-10-2018 IPR002825 Peptidase S49, serine-peptidase prokaryotes GO:0016021 DB29_00334 0f29d34a9495ed3d53cdeff00dd203a5 454 SUPERFAMILY SSF52096 16 203 2.54E-26 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily DB29_00334 0f29d34a9495ed3d53cdeff00dd203a5 454 Gene3D G3DSA:3.90.226.10 28 240 2.2E-46 T 14-10-2018 DB29_00334 0f29d34a9495ed3d53cdeff00dd203a5 454 Gene3D G3DSA:2.40.50.140 377 451 6.8E-7 T 14-10-2018 DB29_01383 dddbb23fedbedc1e26f8bf912be80317 250 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 75 5.4E-20 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DB29_01383 dddbb23fedbedc1e26f8bf912be80317 250 Gene3D G3DSA:1.10.10.10 8 77 2.4E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_01383 dddbb23fedbedc1e26f8bf912be80317 250 Pfam PF07702 UTRA domain 98 234 3.0E-36 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 DB29_01383 dddbb23fedbedc1e26f8bf912be80317 250 Gene3D G3DSA:3.40.1410.10 78 244 2.8E-39 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily DB29_01383 dddbb23fedbedc1e26f8bf912be80317 250 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 35 49 4.5E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DB29_01383 dddbb23fedbedc1e26f8bf912be80317 250 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 49 65 4.5E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DB29_01383 dddbb23fedbedc1e26f8bf912be80317 250 SMART SM00345 16 75 5.0E-20 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DB29_01383 dddbb23fedbedc1e26f8bf912be80317 250 SUPERFAMILY SSF64288 63 242 8.95E-45 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily DB29_01383 dddbb23fedbedc1e26f8bf912be80317 250 SUPERFAMILY SSF46785 8 84 4.43E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_01383 dddbb23fedbedc1e26f8bf912be80317 250 SMART SM00866 97 236 1.4E-33 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 DB29_01910 95e12a1fd4948237dbbd54f44c99268e 1180 Pfam PF04561 RNA polymerase Rpb2, domain 2 140 290 1.3E-30 T 14-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DB29_01910 95e12a1fd4948237dbbd54f44c99268e 1180 Pfam PF04561 RNA polymerase Rpb2, domain 2 376 411 5.8E-6 T 14-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DB29_01910 95e12a1fd4948237dbbd54f44c99268e 1180 ProSitePatterns PS01166 RNA polymerases beta chain signature. 923 935 - T 14-10-2018 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DB29_01910 95e12a1fd4948237dbbd54f44c99268e 1180 Gene3D G3DSA:3.90.1800.10 1058 1111 1.1E-10 T 14-10-2018 DB29_01910 95e12a1fd4948237dbbd54f44c99268e 1180 Gene3D G3DSA:3.90.1100.10 391 590 1.1E-73 T 14-10-2018 DB29_01910 95e12a1fd4948237dbbd54f44c99268e 1180 Pfam PF04560 RNA polymerase Rpb2, domain 7 1072 1146 1.9E-27 T 14-10-2018 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DB29_01910 95e12a1fd4948237dbbd54f44c99268e 1180 Gene3D G3DSA:2.40.270.10 982 1048 1.8E-25 T 14-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DB29_01910 95e12a1fd4948237dbbd54f44c99268e 1180 Gene3D G3DSA:3.90.1100.10 607 672 2.3E-19 T 14-10-2018 DB29_01910 95e12a1fd4948237dbbd54f44c99268e 1180 Pfam PF00562 RNA polymerase Rpb2, domain 6 677 1070 1.1E-166 T 14-10-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DB29_01910 95e12a1fd4948237dbbd54f44c99268e 1180 Pfam PF04565 RNA polymerase Rpb2, domain 3 470 538 4.0E-30 T 14-10-2018 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DB29_01910 95e12a1fd4948237dbbd54f44c99268e 1180 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 204 897 0.0 T 14-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DB29_01910 95e12a1fd4948237dbbd54f44c99268e 1180 Gene3D G3DSA:2.40.270.10 753 791 9.4E-7 T 14-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DB29_01910 95e12a1fd4948237dbbd54f44c99268e 1180 SUPERFAMILY SSF64484 14 1156 0.0 T 14-10-2018 DB29_01910 95e12a1fd4948237dbbd54f44c99268e 1180 Gene3D G3DSA:2.40.50.100 673 752 2.5E-26 T 14-10-2018 DB29_01910 95e12a1fd4948237dbbd54f44c99268e 1180 Gene3D G3DSA:3.90.1100.10 20 153 2.4E-54 T 14-10-2018 DB29_01910 95e12a1fd4948237dbbd54f44c99268e 1180 Gene3D G3DSA:3.90.1110.10 154 274 5.0E-8 T 14-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DB29_01910 95e12a1fd4948237dbbd54f44c99268e 1180 Pfam PF10385 RNA polymerase beta subunit external 1 domain 548 615 1.9E-26 T 14-10-2018 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DB29_01910 95e12a1fd4948237dbbd54f44c99268e 1180 Gene3D G3DSA:2.40.50.150 792 931 3.2E-62 T 14-10-2018 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DB29_01910 95e12a1fd4948237dbbd54f44c99268e 1180 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 15 1148 12.599 T 14-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DB29_01910 95e12a1fd4948237dbbd54f44c99268e 1180 Pfam PF04563 RNA polymerase beta subunit 28 455 7.1E-29 T 14-10-2018 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DB29_03207 1d13be10e1a1a3ebae70d0d198e93bcc 375 PIRSF PIRSF003169 1 375 2.8E-163 T 14-10-2018 IPR016381 Signal transduction histidine kinase, DegS GO:0000155|GO:0000160|GO:0004673 DB29_03207 1d13be10e1a1a3ebae70d0d198e93bcc 375 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 284 373 1.3E-10 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DB29_03207 1d13be10e1a1a3ebae70d0d198e93bcc 375 Gene3D G3DSA:3.30.565.10 242 375 1.0E-31 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB29_03207 1d13be10e1a1a3ebae70d0d198e93bcc 375 Pfam PF05384 Sensor protein DegS 8 166 3.8E-57 T 14-10-2018 IPR008595 Sensor DegS GO:0007165|GO:0016301 DB29_03207 1d13be10e1a1a3ebae70d0d198e93bcc 375 Pfam PF07730 Histidine kinase 176 244 2.6E-15 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 DB29_03207 1d13be10e1a1a3ebae70d0d198e93bcc 375 SUPERFAMILY SSF55874 246 372 9.56E-21 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB29_03207 1d13be10e1a1a3ebae70d0d198e93bcc 375 SMART SM00387 282 375 3.1E-11 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DB29_01597 81e101f0b20bcc230e4024db9cd80d9d 172 SUPERFAMILY SSF51182 51 160 3.87E-8 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily DB29_01597 81e101f0b20bcc230e4024db9cd80d9d 172 Pfam PF07385 D-lyxose isomerase 30 164 1.1E-6 T 14-10-2018 IPR010864 D-lyxose isomerase KEGG: 00040+5.3.1.15 DB29_01597 81e101f0b20bcc230e4024db9cd80d9d 172 Gene3D G3DSA:2.60.120.10 3 172 3.4E-60 T 14-10-2018 IPR014710 RmlC-like jelly roll fold DB29_00741 2c0fac8bda1f6b769baf3e9bce7de1ec 279 Pfam PF00561 alpha/beta hydrolase fold 23 262 4.2E-27 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DB29_00741 2c0fac8bda1f6b769baf3e9bce7de1ec 279 SUPERFAMILY SSF53474 6 274 7.04E-42 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DB29_00741 2c0fac8bda1f6b769baf3e9bce7de1ec 279 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 50 61 2.3E-11 T 14-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 DB29_00741 2c0fac8bda1f6b769baf3e9bce7de1ec 279 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 92 106 2.3E-11 T 14-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 DB29_00741 2c0fac8bda1f6b769baf3e9bce7de1ec 279 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 22 30 2.3E-11 T 14-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 DB29_00741 2c0fac8bda1f6b769baf3e9bce7de1ec 279 PRINTS PR00111 Alpha/beta hydrolase fold signature 47 62 1.8E-6 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DB29_00741 2c0fac8bda1f6b769baf3e9bce7de1ec 279 PRINTS PR00111 Alpha/beta hydrolase fold signature 92 105 1.8E-6 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DB29_00741 2c0fac8bda1f6b769baf3e9bce7de1ec 279 PRINTS PR00111 Alpha/beta hydrolase fold signature 106 119 1.8E-6 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DB29_00741 2c0fac8bda1f6b769baf3e9bce7de1ec 279 Gene3D G3DSA:3.40.50.1820 3 277 1.9E-42 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DB29_04056 2e4398b7a397c9f1aeeff5e9dceb5e6c 710 Pfam PF00575 S1 RNA binding domain 618 689 7.1E-19 T 14-10-2018 IPR003029 S1 domain GO:0003676 DB29_04056 2e4398b7a397c9f1aeeff5e9dceb5e6c 710 PIRSF PIRSF005499 2 710 2.6E-301 T 14-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 DB29_04056 2e4398b7a397c9f1aeeff5e9dceb5e6c 710 SUPERFAMILY SSF54791 554 639 8.34E-24 T 14-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 DB29_04056 2e4398b7a397c9f1aeeff5e9dceb5e6c 710 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 4 692 30.833 T 14-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 DB29_04056 2e4398b7a397c9f1aeeff5e9dceb5e6c 710 SUPERFAMILY SSF55666 449 548 2.23E-28 T 14-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 DB29_04056 2e4398b7a397c9f1aeeff5e9dceb5e6c 710 Pfam PF03725 3' exoribonuclease family, domain 2 147 210 4.1E-15 T 14-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 DB29_04056 2e4398b7a397c9f1aeeff5e9dceb5e6c 710 Pfam PF03725 3' exoribonuclease family, domain 2 458 528 6.4E-8 T 14-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 DB29_04056 2e4398b7a397c9f1aeeff5e9dceb5e6c 710 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 241 318 1.3E-12 T 14-10-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 DB29_04056 2e4398b7a397c9f1aeeff5e9dceb5e6c 710 Gene3D G3DSA:3.30.1370.10 549 620 2.1E-20 T 14-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 DB29_04056 2e4398b7a397c9f1aeeff5e9dceb5e6c 710 SMART SM00322 551 616 6.4E-13 T 14-10-2018 IPR004087 K Homology domain GO:0003676 DB29_04056 2e4398b7a397c9f1aeeff5e9dceb5e6c 710 SUPERFAMILY SSF54211 5 144 1.11E-50 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DB29_04056 2e4398b7a397c9f1aeeff5e9dceb5e6c 710 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 12 690 0.0 T 14-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 DB29_04056 2e4398b7a397c9f1aeeff5e9dceb5e6c 710 Gene3D G3DSA:3.30.230.70 1 230 1.1E-86 T 14-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 DB29_04056 2e4398b7a397c9f1aeeff5e9dceb5e6c 710 Pfam PF01138 3' exoribonuclease family, domain 1 322 455 5.2E-17 T 14-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 DB29_04056 2e4398b7a397c9f1aeeff5e9dceb5e6c 710 Pfam PF01138 3' exoribonuclease family, domain 1 15 144 4.6E-22 T 14-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 DB29_04056 2e4398b7a397c9f1aeeff5e9dceb5e6c 710 Pfam PF00013 KH domain 555 613 8.6E-10 T 14-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 DB29_04056 2e4398b7a397c9f1aeeff5e9dceb5e6c 710 SMART SM00316 619 689 5.8E-26 T 14-10-2018 IPR022967 RNA-binding domain, S1 DB29_04056 2e4398b7a397c9f1aeeff5e9dceb5e6c 710 Gene3D G3DSA:2.40.50.140 621 691 4.3E-27 T 14-10-2018 DB29_04056 2e4398b7a397c9f1aeeff5e9dceb5e6c 710 Gene3D G3DSA:3.30.230.70 235 548 9.8E-113 T 14-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 DB29_04056 2e4398b7a397c9f1aeeff5e9dceb5e6c 710 SUPERFAMILY SSF50249 619 702 1.22E-21 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DB29_04056 2e4398b7a397c9f1aeeff5e9dceb5e6c 710 SUPERFAMILY SSF54211 290 486 1.37E-46 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DB29_04056 2e4398b7a397c9f1aeeff5e9dceb5e6c 710 SUPERFAMILY SSF55666 138 231 3.4E-29 T 14-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 DB29_01149 42dc68d62a760d68293d90fdb3028caf 634 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 6 145 2.3E-35 T 14-10-2018 IPR002178 PTS EIIA type-2 domain DB29_01149 42dc68d62a760d68293d90fdb3028caf 634 TIGRFAM TIGR00848 fruA: PTS system, fructose subfamily, IIA component 7 130 4.2E-35 T 14-10-2018 IPR004715 Phosphotransferase system, IIA component fructose subfamily GO:0008982|GO:0009401|GO:0016021 DB29_01149 42dc68d62a760d68293d90fdb3028caf 634 SUPERFAMILY SSF52794 164 259 1.08E-31 T 14-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 DB29_01149 42dc68d62a760d68293d90fdb3028caf 634 Pfam PF02378 Phosphotransferase system, EIIC 293 562 2.7E-17 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 DB29_01149 42dc68d62a760d68293d90fdb3028caf 634 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 276 616 2.1E-125 T 14-10-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 DB29_01149 42dc68d62a760d68293d90fdb3028caf 634 Gene3D G3DSA:3.40.930.10 2 146 4.1E-41 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 DB29_01149 42dc68d62a760d68293d90fdb3028caf 634 SUPERFAMILY SSF55804 2 145 5.36E-39 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 DB29_01149 42dc68d62a760d68293d90fdb3028caf 634 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 165 247 8.0E-27 T 14-10-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202 DB29_01149 42dc68d62a760d68293d90fdb3028caf 634 Gene3D G3DSA:3.40.50.2300 150 262 5.1E-36 T 14-10-2018 DB29_01149 42dc68d62a760d68293d90fdb3028caf 634 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 167 255 1.3E-16 T 14-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 DB29_01149 42dc68d62a760d68293d90fdb3028caf 634 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 52 68 - T 14-10-2018 IPR002178 PTS EIIA type-2 domain DB29_03094 8ec56aa972fdc5592aa52437ec30b075 226 SUPERFAMILY SSF48498 108 223 1.06E-10 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily DB29_03094 8ec56aa972fdc5592aa52437ec30b075 226 Pfam PF00440 Bacterial regulatory proteins, tetR family 34 77 8.1E-16 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DB29_03094 8ec56aa972fdc5592aa52437ec30b075 226 Gene3D G3DSA:1.10.357.10 20 220 1.7E-38 T 14-10-2018 DB29_03094 8ec56aa972fdc5592aa52437ec30b075 226 SUPERFAMILY SSF46689 26 85 2.94E-15 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DB29_03094 8ec56aa972fdc5592aa52437ec30b075 226 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 47 3.4E-11 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DB29_03094 8ec56aa972fdc5592aa52437ec30b075 226 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 55 78 3.4E-11 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DB29_02065 c56601ad49b45c80c87efffc089007f6 458 Gene3D G3DSA:1.20.120.430 125 458 5.5E-102 T 14-10-2018 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 DB29_02065 c56601ad49b45c80c87efffc089007f6 458 Pfam PF12631 MnmE helical domain 127 455 1.4E-54 T 14-10-2018 IPR025867 MnmE, helical domain Reactome: R-HSA-6787450 DB29_02065 c56601ad49b45c80c87efffc089007f6 458 Gene3D G3DSA:3.30.1360.120 1 124 5.2E-47 T 14-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 DB29_02065 c56601ad49b45c80c87efffc089007f6 458 SUPERFAMILY SSF52540 78 374 7.43E-46 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_02065 c56601ad49b45c80c87efffc089007f6 458 Pfam PF10396 GTP-binding protein TrmE N-terminus 5 124 3.6E-40 T 14-10-2018 IPR018948 GTP-binding protein TrmE, N-terminal Reactome: R-HSA-6787450 DB29_02065 c56601ad49b45c80c87efffc089007f6 458 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 224 371 4.1E-27 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 DB29_02065 c56601ad49b45c80c87efffc089007f6 458 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 11 458 1.6E-125 T 14-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 DB29_02065 c56601ad49b45c80c87efffc089007f6 458 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 4 458 33.34 T 14-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 DB29_02065 c56601ad49b45c80c87efffc089007f6 458 Pfam PF01926 50S ribosome-binding GTPase 224 335 1.2E-25 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 DB29_02065 c56601ad49b45c80c87efffc089007f6 458 Gene3D G3DSA:3.40.50.300 221 386 5.5E-102 T 14-10-2018 DB29_00950 22fa248ed9bc79715e798587c3baa873 374 Pfam PF07687 Peptidase dimerisation domain 174 276 1.6E-21 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain DB29_00950 22fa248ed9bc79715e798587c3baa873 374 Gene3D G3DSA:3.30.70.360 177 286 1.2E-122 T 14-10-2018 DB29_00950 22fa248ed9bc79715e798587c3baa873 374 SUPERFAMILY SSF53187 6 372 8.64E-51 T 14-10-2018 DB29_00950 22fa248ed9bc79715e798587c3baa873 374 SUPERFAMILY SSF55031 177 284 5.1E-21 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain DB29_00950 22fa248ed9bc79715e798587c3baa873 374 PIRSF PIRSF037238 2 373 7.5E-152 T 14-10-2018 IPR017150 Peptidase M20, glutamate carboxypeptidase DB29_00950 22fa248ed9bc79715e798587c3baa873 374 Pfam PF01546 Peptidase family M20/M25/M40 73 369 1.2E-25 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 DB29_00950 22fa248ed9bc79715e798587c3baa873 374 Gene3D G3DSA:3.40.630.10 12 361 1.2E-122 T 14-10-2018 DB29_01784 01df9353067c5f34d06580475ea9d5b8 109 Pfam PF10710 Protein of unknown function (DUF2512) 1 91 2.1E-29 T 14-10-2018 IPR019649 Protein of unknown function DUF2512 DB29_00340 d0323d28e157c57cd277ac72ab0394ad 224 Hamap MF_00114 Deoxyribose-phosphate aldolase [deoC]. 3 219 36.194 T 14-10-2018 IPR028581 Deoxyribose-phosphate aldolase type I GO:0004139 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180 DB29_00340 d0323d28e157c57cd277ac72ab0394ad 224 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 5 215 1.8E-91 T 14-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 DB29_00340 d0323d28e157c57cd277ac72ab0394ad 224 PIRSF PIRSF001357 1 222 1.9E-77 T 14-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 DB29_00340 d0323d28e157c57cd277ac72ab0394ad 224 SUPERFAMILY SSF51569 3 217 1.15E-83 T 14-10-2018 DB29_00340 d0323d28e157c57cd277ac72ab0394ad 224 Pfam PF01791 DeoC/LacD family aldolase 8 214 2.5E-21 T 14-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 DB29_00340 d0323d28e157c57cd277ac72ab0394ad 224 Gene3D G3DSA:3.20.20.70 1 223 8.8E-96 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DB29_00340 d0323d28e157c57cd277ac72ab0394ad 224 SMART SM01133 4 217 1.2E-102 T 14-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 DB29_01514 0d7fed2291235095a74c9dc78f1d74e0 382 Gene3D G3DSA:3.20.20.120 102 344 4.9E-152 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily DB29_01514 0d7fed2291235095a74c9dc78f1d74e0 382 ProSitePatterns PS00908 Mandelate racemase / muconate lactonizing enzyme family signature 1. 82 107 - T 14-10-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 DB29_01514 0d7fed2291235095a74c9dc78f1d74e0 382 Gene3D G3DSA:3.30.390.10 11 374 4.9E-152 T 14-10-2018 IPR029017 Enolase-like, N-terminal DB29_01514 0d7fed2291235095a74c9dc78f1d74e0 382 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 180 211 - T 14-10-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 DB29_01514 0d7fed2291235095a74c9dc78f1d74e0 382 SUPERFAMILY SSF51604 95 360 1.06E-81 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily DB29_01514 0d7fed2291235095a74c9dc78f1d74e0 382 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 14 107 4.1E-26 T 14-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain DB29_01514 0d7fed2291235095a74c9dc78f1d74e0 382 Pfam PF13378 Enolase C-terminal domain-like 130 355 6.6E-64 T 14-10-2018 IPR029065 Enolase C-terminal domain-like DB29_01514 0d7fed2291235095a74c9dc78f1d74e0 382 SMART SM00922 125 230 7.1E-24 T 14-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal DB29_01514 0d7fed2291235095a74c9dc78f1d74e0 382 SUPERFAMILY SSF54826 1 112 2.41E-31 T 14-10-2018 DB29_01859 bbe5b0b53a6a87729d8c99275892dcf0 279 Gene3D G3DSA:2.30.24.10 1 68 1.5E-24 T 14-10-2018 IPR036650 CAT RNA-binding domain superfamily GO:0003723 DB29_01859 bbe5b0b53a6a87729d8c99275892dcf0 279 SMART SM01061 4 61 7.1E-26 T 14-10-2018 IPR004341 CAT RNA-binding domain GO:0003723 DB29_01859 bbe5b0b53a6a87729d8c99275892dcf0 279 SUPERFAMILY SSF50151 4 56 1.01E-16 T 14-10-2018 IPR036650 CAT RNA-binding domain superfamily GO:0003723 DB29_01859 bbe5b0b53a6a87729d8c99275892dcf0 279 SUPERFAMILY SSF63520 57 169 9.59E-31 T 14-10-2018 IPR036634 PRD domain superfamily GO:0006355 DB29_01859 bbe5b0b53a6a87729d8c99275892dcf0 279 Pfam PF03123 CAT RNA binding domain 4 58 2.6E-22 T 14-10-2018 IPR004341 CAT RNA-binding domain GO:0003723 DB29_01859 bbe5b0b53a6a87729d8c99275892dcf0 279 Pfam PF00874 PRD domain 80 165 3.7E-24 T 14-10-2018 IPR011608 PRD domain GO:0006355 DB29_01859 bbe5b0b53a6a87729d8c99275892dcf0 279 Pfam PF00874 PRD domain 184 273 3.6E-18 T 14-10-2018 IPR011608 PRD domain GO:0006355 DB29_01859 bbe5b0b53a6a87729d8c99275892dcf0 279 Gene3D G3DSA:1.20.58.1950 224 275 6.6E-25 T 14-10-2018 DB29_01859 bbe5b0b53a6a87729d8c99275892dcf0 279 Gene3D G3DSA:1.10.1790.10 69 167 3.0E-30 T 14-10-2018 DB29_01859 bbe5b0b53a6a87729d8c99275892dcf0 279 SUPERFAMILY SSF63520 173 275 3.4E-23 T 14-10-2018 IPR036634 PRD domain superfamily GO:0006355 DB29_01859 bbe5b0b53a6a87729d8c99275892dcf0 279 Gene3D G3DSA:1.20.890.100 168 222 6.0E-19 T 14-10-2018 DB29_03846 650121c104d855482d0029e0b713c12e 69 Pfam PF07288 Protein of unknown function (DUF1447) 2 67 3.1E-28 T 14-10-2018 IPR009907 Protein of unknown function DUF1447 DB29_03846 650121c104d855482d0029e0b713c12e 69 Gene3D G3DSA:3.10.20.730 1 58 2.0E-25 T 14-10-2018 DB29_03846 650121c104d855482d0029e0b713c12e 69 ProDom PD055417 UPF0356 TRANSCRIPTIONAL REGULATOR SP0122 SH1862 BLI01669/BL01628 MW0973 LMOF2365_1049 BCE33L3734 SPYM3_1619/SPS0248 1 64 4.0E-31 T 14-10-2018 IPR009907 Protein of unknown function DUF1447 DB29_03846 650121c104d855482d0029e0b713c12e 69 Hamap MF_01553 UPF0356 protein . 1 69 22.201 T 14-10-2018 IPR009907 Protein of unknown function DUF1447 DB29_03847 ca6aae1c10d2fb8af2de746995f33380 183 Pfam PF01327 Polypeptide deformylase 4 171 7.1E-44 T 14-10-2018 IPR023635 Peptide deformylase DB29_03847 ca6aae1c10d2fb8af2de746995f33380 183 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 5 173 6.5E-44 T 14-10-2018 IPR023635 Peptide deformylase DB29_03847 ca6aae1c10d2fb8af2de746995f33380 183 SUPERFAMILY SSF56420 1 171 2.36E-57 T 14-10-2018 IPR036821 Peptide deformylase superfamily DB29_03847 ca6aae1c10d2fb8af2de746995f33380 183 Gene3D G3DSA:3.90.45.10 1 175 5.6E-62 T 14-10-2018 IPR036821 Peptide deformylase superfamily DB29_03847 ca6aae1c10d2fb8af2de746995f33380 183 PIRSF PIRSF004749 2 175 4.9E-42 T 14-10-2018 IPR023635 Peptide deformylase DB29_03847 ca6aae1c10d2fb8af2de746995f33380 183 Hamap MF_00163 Peptide deformylase [def]. 3 177 28.055 T 14-10-2018 IPR023635 Peptide deformylase DB29_03847 ca6aae1c10d2fb8af2de746995f33380 183 PRINTS PR01576 Peptide deformylase signature 108 119 4.1E-31 T 14-10-2018 IPR023635 Peptide deformylase DB29_03847 ca6aae1c10d2fb8af2de746995f33380 183 PRINTS PR01576 Peptide deformylase signature 121 139 4.1E-31 T 14-10-2018 IPR023635 Peptide deformylase DB29_03847 ca6aae1c10d2fb8af2de746995f33380 183 PRINTS PR01576 Peptide deformylase signature 47 76 4.1E-31 T 14-10-2018 IPR023635 Peptide deformylase DB29_03847 ca6aae1c10d2fb8af2de746995f33380 183 PRINTS PR01576 Peptide deformylase signature 140 169 4.1E-31 T 14-10-2018 IPR023635 Peptide deformylase DB29_03577 cf97eab684a3d1ddf1e2d3ddb8c8585e 787 SMART SM00534 328 513 2.2E-80 T 14-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 DB29_03577 cf97eab684a3d1ddf1e2d3ddb8c8585e 787 Pfam PF00488 MutS domain V 331 510 6.6E-36 T 14-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 DB29_03577 cf97eab684a3d1ddf1e2d3ddb8c8585e 787 SMART SM00463 709 787 3.0E-19 T 14-10-2018 IPR002625 Smr domain DB29_03577 cf97eab684a3d1ddf1e2d3ddb8c8585e 787 Gene3D G3DSA:3.30.1370.110 700 787 3.1E-23 T 14-10-2018 DB29_03577 cf97eab684a3d1ddf1e2d3ddb8c8585e 787 SUPERFAMILY SSF160443 710 782 3.14E-8 T 14-10-2018 IPR036063 Smr domain superfamily DB29_03577 cf97eab684a3d1ddf1e2d3ddb8c8585e 787 Gene3D G3DSA:1.10.1420.10 111 226 2.0E-7 T 14-10-2018 DB29_03577 cf97eab684a3d1ddf1e2d3ddb8c8585e 787 Gene3D G3DSA:1.10.1420.10 41 281 2.0E-7 T 14-10-2018 DB29_03577 cf97eab684a3d1ddf1e2d3ddb8c8585e 787 SUPERFAMILY SSF48334 16 287 3.01E-30 T 14-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily DB29_03577 cf97eab684a3d1ddf1e2d3ddb8c8585e 787 Gene3D G3DSA:3.40.50.300 292 599 2.4E-83 T 14-10-2018 DB29_03577 cf97eab684a3d1ddf1e2d3ddb8c8585e 787 Hamap MF_00092 Endonuclease MutS2 [mutS2]. 1 786 22.006 T 14-10-2018 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 DB29_03577 cf97eab684a3d1ddf1e2d3ddb8c8585e 787 Pfam PF01713 Smr domain 712 787 2.0E-18 T 14-10-2018 IPR002625 Smr domain DB29_03577 cf97eab684a3d1ddf1e2d3ddb8c8585e 787 SMART SM00533 9 315 2.0E-33 T 14-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 DB29_03577 cf97eab684a3d1ddf1e2d3ddb8c8585e 787 PIRSF PIRSF005814 1 787 4.0E-272 T 14-10-2018 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 DB29_03577 cf97eab684a3d1ddf1e2d3ddb8c8585e 787 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 410 426 - T 14-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 DB29_03577 cf97eab684a3d1ddf1e2d3ddb8c8585e 787 TIGRFAM TIGR01069 mutS2: MutS2 family protein 4 787 1.5E-262 T 14-10-2018 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 DB29_03577 cf97eab684a3d1ddf1e2d3ddb8c8585e 787 SUPERFAMILY SSF52540 292 513 3.22E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_04087 266b6a12936ff45cecd11ce001ac3cdf 268 ProDom PD119415 TRANSGLUTAMINASE TRANSFERASE ACYLTRANSFERASE GAMMA-GLUTAMYLTRANSFERASE PROTEIN-GLUTAMINE TGASE SPORULATION TGL 1 235 2.0E-138 T 14-10-2018 IPR020916 Protein-glutamine gamma-glutamyltransferase, bacteria GO:0003810 DB29_04087 266b6a12936ff45cecd11ce001ac3cdf 268 Hamap MF_00727 Protein-glutamine gamma-glutamyltransferase [tgl]. 1 244 41.921 T 14-10-2018 IPR020916 Protein-glutamine gamma-glutamyltransferase, bacteria GO:0003810 DB29_02202 33e5c467aa8e1be90f2a2a454e12342a 244 SUPERFAMILY SSF55729 121 235 5.22E-8 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase DB29_02202 33e5c467aa8e1be90f2a2a454e12342a 244 Pfam PF12746 GNAT acetyltransferase 158 234 4.7E-9 T 14-10-2018 IPR027365 GNAT acetyltransferase YdfB-like DB29_02202 33e5c467aa8e1be90f2a2a454e12342a 244 Gene3D G3DSA:3.40.630.30 118 234 4.7E-16 T 14-10-2018 DB29_01418 2e8f650ed9124eacf35b3a75cc03e7d8 434 PIRSF PIRSF006066 6 434 6.5E-152 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 DB29_01418 2e8f650ed9124eacf35b3a75cc03e7d8 434 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 12 422 6.3E-113 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit DB29_01418 2e8f650ed9124eacf35b3a75cc03e7d8 434 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 22 428 2.2E-127 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 DB29_03546 7d607520a74f789abbdb8f707c6dc26e 129 TIGRFAM TIGR03330 SAM_DCase_Bsu: S-adenosylmethionine decarboxylase proenzyme 3 113 1.6E-41 T 14-10-2018 IPR017716 S-adenosylmethionine decarboxylase proenzyme GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 DB29_03546 7d607520a74f789abbdb8f707c6dc26e 129 SUPERFAMILY SSF56276 3 114 1.35E-41 T 14-10-2018 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|Reactome: R-HSA-351202 DB29_03546 7d607520a74f789abbdb8f707c6dc26e 129 Hamap MF_00464 S-adenosylmethionine decarboxylase proenzyme [speH]. 1 117 31.754 T 14-10-2018 IPR017716 S-adenosylmethionine decarboxylase proenzyme GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 DB29_03546 7d607520a74f789abbdb8f707c6dc26e 129 Pfam PF02675 S-adenosylmethionine decarboxylase 7 113 4.0E-37 T 14-10-2018 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 DB29_03546 7d607520a74f789abbdb8f707c6dc26e 129 Gene3D G3DSA:3.30.160.750 63 128 1.9E-18 T 14-10-2018 DB29_03546 7d607520a74f789abbdb8f707c6dc26e 129 Gene3D G3DSA:3.30.360.110 1 62 4.5E-25 T 14-10-2018 DB29_00539 649c4dd190f93ae19cbd5f582a75f975 240 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 47 63 1.2E-6 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DB29_00539 649c4dd190f93ae19cbd5f582a75f975 240 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 33 47 1.2E-6 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DB29_00539 649c4dd190f93ae19cbd5f582a75f975 240 Pfam PF07702 UTRA domain 95 233 7.9E-45 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 DB29_00539 649c4dd190f93ae19cbd5f582a75f975 240 SMART SM00866 94 233 7.6E-47 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 DB29_00539 649c4dd190f93ae19cbd5f582a75f975 240 Gene3D G3DSA:1.10.10.10 8 76 3.4E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_00539 649c4dd190f93ae19cbd5f582a75f975 240 SUPERFAMILY SSF64288 63 236 3.14E-56 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily DB29_00539 649c4dd190f93ae19cbd5f582a75f975 240 Gene3D G3DSA:3.40.1410.10 77 240 3.9E-56 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily DB29_00539 649c4dd190f93ae19cbd5f582a75f975 240 SMART SM00345 14 73 1.3E-19 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DB29_00539 649c4dd190f93ae19cbd5f582a75f975 240 SUPERFAMILY SSF46785 1 85 4.67E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_00539 649c4dd190f93ae19cbd5f582a75f975 240 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 73 8.3E-20 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DB29_01593 e5084b22f0f9c43182b45cb41d180b3b 295 SUPERFAMILY SSF51366 19 269 3.95E-67 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 DB29_01593 e5084b22f0f9c43182b45cb41d180b3b 295 Hamap MF_01824 Pyridoxal 5'-phosphate synthase subunit PdxS [pdxS]. 5 295 52.892 T 14-10-2018 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 DB29_01593 e5084b22f0f9c43182b45cb41d180b3b 295 Pfam PF01680 SOR/SNZ family 9 213 1.4E-105 T 14-10-2018 IPR033755 PdxS/SNZ N-terminal domain KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 DB29_01593 e5084b22f0f9c43182b45cb41d180b3b 295 PIRSF PIRSF029271 1 295 4.0E-151 T 14-10-2018 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 DB29_01593 e5084b22f0f9c43182b45cb41d180b3b 295 Gene3D G3DSA:3.20.20.70 1 295 1.0E-143 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DB29_01593 e5084b22f0f9c43182b45cb41d180b3b 295 ProSitePatterns PS01235 PdxS/SNZ family signature. 206 224 - T 14-10-2018 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 DB29_01593 e5084b22f0f9c43182b45cb41d180b3b 295 TIGRFAM TIGR00343 TIGR00343: pyridoxal 5'-phosphate synthase, synthase subunit Pdx1 10 295 4.5E-155 T 14-10-2018 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 DB29_03603 cc5c6f25e7fe30770d711099bf0a46ae 509 SUPERFAMILY SSF49503 350 500 2.31E-34 T 14-10-2018 IPR008972 Cupredoxin DB29_03603 cc5c6f25e7fe30770d711099bf0a46ae 509 Pfam PF07732 Multicopper oxidase 98 175 4.5E-8 T 14-10-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 DB29_03603 cc5c6f25e7fe30770d711099bf0a46ae 509 Pfam PF07732 Multicopper oxidase 44 79 1.9E-5 T 14-10-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 DB29_03603 cc5c6f25e7fe30770d711099bf0a46ae 509 Pfam PF07731 Multicopper oxidase 380 500 6.2E-22 T 14-10-2018 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 DB29_03603 cc5c6f25e7fe30770d711099bf0a46ae 509 SUPERFAMILY SSF49503 181 304 7.58E-27 T 14-10-2018 IPR008972 Cupredoxin DB29_03603 cc5c6f25e7fe30770d711099bf0a46ae 509 SUPERFAMILY SSF49503 3 177 1.64E-36 T 14-10-2018 IPR008972 Cupredoxin DB29_03603 cc5c6f25e7fe30770d711099bf0a46ae 509 Gene3D G3DSA:2.60.40.420 173 347 1.4E-65 T 14-10-2018 IPR008972 Cupredoxin DB29_03603 cc5c6f25e7fe30770d711099bf0a46ae 509 Gene3D G3DSA:2.60.40.420 1 171 1.1E-67 T 14-10-2018 IPR008972 Cupredoxin DB29_03603 cc5c6f25e7fe30770d711099bf0a46ae 509 Gene3D G3DSA:2.60.40.420 348 504 3.8E-53 T 14-10-2018 IPR008972 Cupredoxin DB29_02222 bb125033cf71724fbfbbf281383cf385 540 PIRSF PIRSF038928 23 518 6.9E-179 T 14-10-2018 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 DB29_02222 bb125033cf71724fbfbbf281383cf385 540 Pfam PF06628 Catalase-related immune-responsive 451 511 3.1E-18 T 14-10-2018 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 DB29_02222 bb125033cf71724fbfbbf281383cf385 540 SMART SM01060 35 428 4.9E-256 T 14-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 DB29_02222 bb125033cf71724fbfbbf281383cf385 540 Pfam PF00199 Catalase 35 424 6.2E-175 T 14-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 DB29_02222 bb125033cf71724fbfbbf281383cf385 540 PRINTS PR00067 Catalase signature 116 134 3.9E-65 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 DB29_02222 bb125033cf71724fbfbbf281383cf385 540 PRINTS PR00067 Catalase signature 156 174 3.9E-65 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 DB29_02222 bb125033cf71724fbfbbf281383cf385 540 PRINTS PR00067 Catalase signature 321 348 3.9E-65 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 DB29_02222 bb125033cf71724fbfbbf281383cf385 540 PRINTS PR00067 Catalase signature 353 379 3.9E-65 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 DB29_02222 bb125033cf71724fbfbbf281383cf385 540 PRINTS PR00067 Catalase signature 48 71 3.9E-65 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 DB29_02222 bb125033cf71724fbfbbf281383cf385 540 PRINTS PR00067 Catalase signature 137 154 3.9E-65 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 DB29_02222 bb125033cf71724fbfbbf281383cf385 540 Gene3D G3DSA:2.40.180.10 31 535 6.4E-225 T 14-10-2018 IPR037060 Catalase core domain superfamily GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 DB29_02222 bb125033cf71724fbfbbf281383cf385 540 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 366 374 - T 14-10-2018 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 DB29_02222 bb125033cf71724fbfbbf281383cf385 540 SUPERFAMILY SSF56634 24 514 1.06E-200 T 14-10-2018 IPR020835 Catalase superfamily GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 DB29_02222 bb125033cf71724fbfbbf281383cf385 540 ProSitePatterns PS00438 Catalase proximal active site signature. 71 87 - T 14-10-2018 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 DB29_01409 80904f2353f532be10b37bd54842fba7 573 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 172 332 5.1E-45 T 14-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DB29_01409 80904f2353f532be10b37bd54842fba7 573 SUPERFAMILY SSF56014 147 346 1.44E-56 T 14-10-2018 DB29_01409 80904f2353f532be10b37bd54842fba7 573 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 75 129 1.9E-16 T 14-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DB29_01409 80904f2353f532be10b37bd54842fba7 573 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 355 418 6.2E-16 T 14-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DB29_01409 80904f2353f532be10b37bd54842fba7 573 SUPERFAMILY SSF55124 13 146 7.69E-33 T 14-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DB29_01409 80904f2353f532be10b37bd54842fba7 573 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 433 563 1.0E-5 T 14-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DB29_01409 80904f2353f532be10b37bd54842fba7 573 PRINTS PR00397 Sirohaem Fe-binding site signature 481 499 1.4E-8 T 14-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DB29_01409 80904f2353f532be10b37bd54842fba7 573 PRINTS PR00397 Sirohaem Fe-binding site signature 433 451 1.4E-8 T 14-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DB29_01409 80904f2353f532be10b37bd54842fba7 573 SUPERFAMILY SSF55124 348 424 3.93E-21 T 14-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DB29_01409 80904f2353f532be10b37bd54842fba7 573 Gene3D G3DSA:3.90.480.10 319 425 3.3E-31 T 14-10-2018 DB29_01409 80904f2353f532be10b37bd54842fba7 573 Gene3D G3DSA:3.90.480.10 80 168 2.1E-25 T 14-10-2018 DB29_01409 80904f2353f532be10b37bd54842fba7 573 TIGRFAM TIGR02041 CysI: sulfite reductase (NADPH) hemoprotein, beta-component 18 562 1.2E-274 T 14-10-2018 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DB29_01409 80904f2353f532be10b37bd54842fba7 573 Gene3D G3DSA:3.30.413.10 429 570 1.8E-38 T 14-10-2018 DB29_01409 80904f2353f532be10b37bd54842fba7 573 Gene3D G3DSA:3.30.413.10 188 318 1.3E-12 T 14-10-2018 DB29_01409 80904f2353f532be10b37bd54842fba7 573 SUPERFAMILY SSF56014 431 566 5.89E-37 T 14-10-2018 DB29_01409 80904f2353f532be10b37bd54842fba7 573 Hamap MF_01540 Sulfite reductase [NADPH] hemoprotein beta-component [cysI]. 9 573 58.271 T 14-10-2018 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DB29_02306 d2ea8b24c02aaf0e6a30c497ba760c36 398 SMART SM00155 140 167 1.8E-4 T 14-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 DB29_02306 d2ea8b24c02aaf0e6a30c497ba760c36 398 SMART SM00155 311 338 0.016 T 14-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 DB29_02306 d2ea8b24c02aaf0e6a30c497ba760c36 398 SUPERFAMILY SSF56024 193 383 1.55E-37 T 14-10-2018 DB29_02306 d2ea8b24c02aaf0e6a30c497ba760c36 398 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 41 398 6.2E-101 T 14-10-2018 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 DB29_02306 d2ea8b24c02aaf0e6a30c497ba760c36 398 PIRSF PIRSF000850 29 178 0.0012 T 14-10-2018 DB29_02306 d2ea8b24c02aaf0e6a30c497ba760c36 398 PIRSF PIRSF000850 220 379 3.3E-5 T 14-10-2018 DB29_02306 d2ea8b24c02aaf0e6a30c497ba760c36 398 Gene3D G3DSA:3.30.870.10 35 222 4.1E-41 T 14-10-2018 DB29_02306 d2ea8b24c02aaf0e6a30c497ba760c36 398 SUPERFAMILY SSF56024 42 219 8.75E-43 T 14-10-2018 DB29_02306 d2ea8b24c02aaf0e6a30c497ba760c36 398 Gene3D G3DSA:3.30.870.10 223 371 5.2E-22 T 14-10-2018 DB29_02306 d2ea8b24c02aaf0e6a30c497ba760c36 398 Pfam PF13091 PLD-like domain 58 201 2.5E-14 T 14-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 DB29_02306 d2ea8b24c02aaf0e6a30c497ba760c36 398 Pfam PF13091 PLD-like domain 238 359 8.8E-21 T 14-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 DB29_03451 15379e99fdf64174446025e810218069 146 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 4 117 4.2E-15 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain DB29_03451 15379e99fdf64174446025e810218069 146 SUPERFAMILY SSF54593 1 129 4.3E-27 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DB29_03451 15379e99fdf64174446025e810218069 146 Hamap MF_01512 Metallothiol transferase FosB [fosB]. 1 139 37.866 T 14-10-2018 IPR022858 Metallothiol transferase FosB GO:0016765|GO:0046677 DB29_03451 15379e99fdf64174446025e810218069 146 Gene3D G3DSA:3.10.180.10 1 136 9.9E-36 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DB29_00577 62f28fd8c3a6b04443b4e03df5cc6876 275 SMART SM00342 186 269 5.8E-21 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DB29_00577 62f28fd8c3a6b04443b4e03df5cc6876 275 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 220 265 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 DB29_00577 62f28fd8c3a6b04443b4e03df5cc6876 275 Pfam PF02311 AraC-like ligand binding domain 18 146 3.0E-11 T 14-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 DB29_00577 62f28fd8c3a6b04443b4e03df5cc6876 275 SUPERFAMILY SSF46689 224 271 1.08E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DB29_00577 62f28fd8c3a6b04443b4e03df5cc6876 275 SUPERFAMILY SSF51182 29 195 7.11E-12 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily DB29_00577 62f28fd8c3a6b04443b4e03df5cc6876 275 Gene3D G3DSA:2.60.120.10 5 92 1.4E-12 T 14-10-2018 IPR014710 RmlC-like jelly roll fold DB29_00577 62f28fd8c3a6b04443b4e03df5cc6876 275 Gene3D G3DSA:1.10.10.60 167 221 5.3E-16 T 14-10-2018 DB29_00577 62f28fd8c3a6b04443b4e03df5cc6876 275 Gene3D G3DSA:1.10.10.60 222 273 8.3E-13 T 14-10-2018 DB29_00577 62f28fd8c3a6b04443b4e03df5cc6876 275 Pfam PF12833 Helix-turn-helix domain 193 270 6.9E-19 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DB29_00343 d85f286987e66859af98dbf7b819cddf 254 Gene3D G3DSA:3.40.50.150 25 254 1.2E-56 T 14-10-2018 DB29_00343 d85f286987e66859af98dbf7b819cddf 254 SUPERFAMILY SSF53335 28 205 1.99E-42 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DB29_00343 d85f286987e66859af98dbf7b819cddf 254 Pfam PF08241 Methyltransferase domain 44 139 9.5E-23 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 DB29_01723 e45db5d395f24adba37a225e8e7791cf 269 SUPERFAMILY SSF161098 6 269 1.12E-66 T 14-10-2018 IPR035906 MetI-like superfamily DB29_01723 e45db5d395f24adba37a225e8e7791cf 269 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 80 259 2.2E-18 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DB29_01723 e45db5d395f24adba37a225e8e7791cf 269 Gene3D G3DSA:1.10.3720.10 5 260 3.4E-64 T 14-10-2018 IPR035906 MetI-like superfamily DB29_01546 e64141bbc58e27375f2c33d5c9827b52 88 Pfam PF02595 Glycerate kinase family 3 80 1.1E-20 T 14-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 DB29_01546 e64141bbc58e27375f2c33d5c9827b52 88 SUPERFAMILY SSF110738 1 80 3.92E-22 T 14-10-2018 IPR036129 Glycerate kinase superfamily GO:0008887|GO:0031388 DB29_01546 e64141bbc58e27375f2c33d5c9827b52 88 Gene3D G3DSA:3.40.50.10350 1 41 9.7E-20 T 14-10-2018 IPR018197 Glycerate kinase, restriction-enzyme-like fold DB29_01546 e64141bbc58e27375f2c33d5c9827b52 88 Gene3D G3DSA:3.90.1510.10 42 76 9.7E-20 T 14-10-2018 IPR018193 Glycerate kinase, flavodoxin-like fold GO:0008887|GO:0031388 DB29_03528 deb85ad65f84efbf2b84d982c4dda202 221 SMART SM00895 96 218 1.1E-21 T 14-10-2018 IPR011711 GntR, C-terminal DB29_03528 deb85ad65f84efbf2b84d982c4dda202 221 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 31 45 4.4E-7 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DB29_03528 deb85ad65f84efbf2b84d982c4dda202 221 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 61 4.4E-7 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DB29_03528 deb85ad65f84efbf2b84d982c4dda202 221 Gene3D G3DSA:1.20.120.530 94 221 1.2E-28 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DB29_03528 deb85ad65f84efbf2b84d982c4dda202 221 Gene3D G3DSA:1.10.10.10 6 75 1.9E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_03528 deb85ad65f84efbf2b84d982c4dda202 221 SUPERFAMILY SSF46785 5 75 4.41E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_03528 deb85ad65f84efbf2b84d982c4dda202 221 Pfam PF07729 FCD domain 96 217 3.2E-23 T 14-10-2018 IPR011711 GntR, C-terminal DB29_03528 deb85ad65f84efbf2b84d982c4dda202 221 SMART SM00345 12 71 1.1E-15 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DB29_03528 deb85ad65f84efbf2b84d982c4dda202 221 SUPERFAMILY SSF48008 95 220 2.88E-25 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DB29_03528 deb85ad65f84efbf2b84d982c4dda202 221 Pfam PF00392 Bacterial regulatory proteins, gntR family 10 70 7.6E-16 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DB29_03672 8bb6b9b717890b62e64f842d9339038f 863 SUPERFAMILY SSF52540 2 827 2.5E-108 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_03672 8bb6b9b717890b62e64f842d9339038f 863 Gene3D G3DSA:3.40.50.300 320 454 2.0E-37 T 14-10-2018 DB29_03672 8bb6b9b717890b62e64f842d9339038f 863 Pfam PF13361 UvrD-like helicase C-terminal domain 431 820 2.4E-34 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 DB29_03672 8bb6b9b717890b62e64f842d9339038f 863 Gene3D G3DSA:3.40.50.300 708 859 1.6E-24 T 14-10-2018 DB29_03672 8bb6b9b717890b62e64f842d9339038f 863 Pfam PF00580 UvrD/REP helicase N-terminal domain 4 421 6.6E-60 T 14-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 DB29_03672 8bb6b9b717890b62e64f842d9339038f 863 Gene3D G3DSA:3.40.50.300 491 599 9.1E-20 T 14-10-2018 DB29_03672 8bb6b9b717890b62e64f842d9339038f 863 Gene3D G3DSA:3.40.50.300 1 174 6.1E-33 T 14-10-2018 DB29_02257 de302a2d3a91726209be3efdc1a8c02b 491 Gene3D G3DSA:3.40.640.10 153 370 3.7E-101 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DB29_02257 de302a2d3a91726209be3efdc1a8c02b 491 SUPERFAMILY SSF53383 102 476 7.43E-91 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DB29_02257 de302a2d3a91726209be3efdc1a8c02b 491 SUPERFAMILY SSF46785 6 80 5.46E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_02257 de302a2d3a91726209be3efdc1a8c02b 491 Pfam PF00155 Aminotransferase class I and II 150 469 1.6E-30 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 DB29_02257 de302a2d3a91726209be3efdc1a8c02b 491 SMART SM00345 17 76 8.1E-17 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DB29_02257 de302a2d3a91726209be3efdc1a8c02b 491 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 76 1.7E-16 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DB29_02257 de302a2d3a91726209be3efdc1a8c02b 491 Gene3D G3DSA:1.10.10.10 1 77 8.7E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_02257 de302a2d3a91726209be3efdc1a8c02b 491 Gene3D G3DSA:3.90.1150.10 112 474 3.7E-101 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DB29_00701 9c378b58e98df20d3d5dfe4f7ca3e0d8 488 SUPERFAMILY SSF56634 4 480 8.77E-201 T 14-10-2018 IPR020835 Catalase superfamily GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 DB29_00701 9c378b58e98df20d3d5dfe4f7ca3e0d8 488 SMART SM01060 5 388 1.0E-260 T 14-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 DB29_00701 9c378b58e98df20d3d5dfe4f7ca3e0d8 488 ProSitePatterns PS00438 Catalase proximal active site signature. 41 57 - T 14-10-2018 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 DB29_00701 9c378b58e98df20d3d5dfe4f7ca3e0d8 488 Pfam PF00199 Catalase 5 385 4.3E-178 T 14-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 DB29_00701 9c378b58e98df20d3d5dfe4f7ca3e0d8 488 Pfam PF06628 Catalase-related immune-responsive 411 471 1.8E-16 T 14-10-2018 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 DB29_00701 9c378b58e98df20d3d5dfe4f7ca3e0d8 488 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 331 339 - T 14-10-2018 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 DB29_00701 9c378b58e98df20d3d5dfe4f7ca3e0d8 488 Gene3D G3DSA:2.40.180.10 1 485 2.0E-218 T 14-10-2018 IPR037060 Catalase core domain superfamily GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 DB29_00701 9c378b58e98df20d3d5dfe4f7ca3e0d8 488 PRINTS PR00067 Catalase signature 121 139 3.0E-72 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 DB29_00701 9c378b58e98df20d3d5dfe4f7ca3e0d8 488 PRINTS PR00067 Catalase signature 318 344 3.0E-72 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 DB29_00701 9c378b58e98df20d3d5dfe4f7ca3e0d8 488 PRINTS PR00067 Catalase signature 102 119 3.0E-72 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 DB29_00701 9c378b58e98df20d3d5dfe4f7ca3e0d8 488 PRINTS PR00067 Catalase signature 286 313 3.0E-72 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 DB29_00701 9c378b58e98df20d3d5dfe4f7ca3e0d8 488 PRINTS PR00067 Catalase signature 81 99 3.0E-72 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 DB29_00701 9c378b58e98df20d3d5dfe4f7ca3e0d8 488 PRINTS PR00067 Catalase signature 18 41 3.0E-72 T 14-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 DB29_00701 9c378b58e98df20d3d5dfe4f7ca3e0d8 488 PIRSF PIRSF038928 1 478 6.3E-187 T 14-10-2018 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 DB29_02355 3e8240e422ba40ecee1783ffabe96889 286 Pfam PF01551 Peptidase family M23 115 213 4.0E-22 T 14-10-2018 IPR016047 Peptidase M23 DB29_02355 3e8240e422ba40ecee1783ffabe96889 286 SUPERFAMILY SSF51261 108 214 7.32E-25 T 14-10-2018 IPR011055 Duplicated hybrid motif DB29_02355 3e8240e422ba40ecee1783ffabe96889 286 Gene3D G3DSA:2.70.70.10 73 228 2.8E-45 T 14-10-2018 IPR011055 Duplicated hybrid motif DB29_01394 c4d6bebcabf12ced61ee09d09acb1630 196 Gene3D G3DSA:1.10.357.10 7 193 3.9E-32 T 14-10-2018 DB29_01394 c4d6bebcabf12ced61ee09d09acb1630 196 Pfam PF00440 Bacterial regulatory proteins, tetR family 24 64 2.6E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DB29_01394 c4d6bebcabf12ced61ee09d09acb1630 196 SUPERFAMILY SSF46689 10 73 1.13E-14 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DB29_03887 0611cb289b8245e102822cadfcc19de6 160 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 47 154 8.1E-22 T 14-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 DB29_03887 0611cb289b8245e102822cadfcc19de6 160 SUPERFAMILY SSF54637 46 159 2.61E-31 T 14-10-2018 IPR029069 HotDog domain superfamily DB29_03887 0611cb289b8245e102822cadfcc19de6 160 Pfam PF03061 Thioesterase superfamily 72 147 3.5E-13 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 DB29_03887 0611cb289b8245e102822cadfcc19de6 160 Gene3D G3DSA:3.10.129.10 1 160 4.4E-54 T 14-10-2018 DB29_02468 22a8d6dd2c2f7373178e574ce73e4ada 410 SUPERFAMILY SSF55031 213 328 3.49E-28 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain DB29_02468 22a8d6dd2c2f7373178e574ce73e4ada 410 Gene3D G3DSA:3.30.70.360 213 327 1.6E-129 T 14-10-2018 DB29_02468 22a8d6dd2c2f7373178e574ce73e4ada 410 Gene3D G3DSA:3.40.630.10 20 401 1.6E-129 T 14-10-2018 DB29_02468 22a8d6dd2c2f7373178e574ce73e4ada 410 SUPERFAMILY SSF53187 4 409 3.55E-78 T 14-10-2018 DB29_02468 22a8d6dd2c2f7373178e574ce73e4ada 410 Pfam PF07687 Peptidase dimerisation domain 214 307 7.4E-8 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain DB29_02468 22a8d6dd2c2f7373178e574ce73e4ada 410 Pfam PF01546 Peptidase family M20/M25/M40 79 406 1.7E-28 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 DB29_02468 22a8d6dd2c2f7373178e574ce73e4ada 410 PIRSF PIRSF001235 3 410 1.1E-129 T 14-10-2018 IPR010158 Amidase, carbamoylase-type GO:0016813 DB29_02468 22a8d6dd2c2f7373178e574ce73e4ada 410 TIGRFAM TIGR01879 hydantase: amidase, hydantoinase/carbamoylase family 14 408 1.5E-126 T 14-10-2018 IPR010158 Amidase, carbamoylase-type GO:0016813 DB29_02136 e55c919bc6f888bf9ea2f7fb72201a8c 424 PIRSF PIRSF006066 1 424 8.8E-149 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 DB29_02136 e55c919bc6f888bf9ea2f7fb72201a8c 424 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 8 415 7.7E-116 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit DB29_02136 e55c919bc6f888bf9ea2f7fb72201a8c 424 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 17 420 8.8E-124 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 DB29_04099 008b0dee27de839f666de48105f4c779 313 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 89 220 2.2E-20 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 DB29_04099 008b0dee27de839f666de48105f4c779 313 PRINTS PR00819 CbxX/CfqX superfamily signature 48 62 5.6E-58 T 14-10-2018 IPR000641 CbxX/CfqX GO:0005524 DB29_04099 008b0dee27de839f666de48105f4c779 313 PRINTS PR00819 CbxX/CfqX superfamily signature 88 103 5.6E-58 T 14-10-2018 IPR000641 CbxX/CfqX GO:0005524 DB29_04099 008b0dee27de839f666de48105f4c779 313 PRINTS PR00819 CbxX/CfqX superfamily signature 208 227 5.6E-58 T 14-10-2018 IPR000641 CbxX/CfqX GO:0005524 DB29_04099 008b0dee27de839f666de48105f4c779 313 PRINTS PR00819 CbxX/CfqX superfamily signature 267 279 5.6E-58 T 14-10-2018 IPR000641 CbxX/CfqX GO:0005524 DB29_04099 008b0dee27de839f666de48105f4c779 313 PRINTS PR00819 CbxX/CfqX superfamily signature 140 159 5.6E-58 T 14-10-2018 IPR000641 CbxX/CfqX GO:0005524 DB29_04099 008b0dee27de839f666de48105f4c779 313 PRINTS PR00819 CbxX/CfqX superfamily signature 126 140 5.6E-58 T 14-10-2018 IPR000641 CbxX/CfqX GO:0005524 DB29_04099 008b0dee27de839f666de48105f4c779 313 PRINTS PR00819 CbxX/CfqX superfamily signature 170 182 5.6E-58 T 14-10-2018 IPR000641 CbxX/CfqX GO:0005524 DB29_04099 008b0dee27de839f666de48105f4c779 313 PRINTS PR00819 CbxX/CfqX superfamily signature 191 208 5.6E-58 T 14-10-2018 IPR000641 CbxX/CfqX GO:0005524 DB29_04099 008b0dee27de839f666de48105f4c779 313 Gene3D G3DSA:3.40.50.300 23 220 3.4E-58 T 14-10-2018 DB29_04099 008b0dee27de839f666de48105f4c779 313 SUPERFAMILY SSF52540 46 293 6.24E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_04099 008b0dee27de839f666de48105f4c779 313 TIGRFAM TIGR02881 spore_V_K: stage V sporulation protein K 46 305 1.1E-138 T 14-10-2018 IPR014232 Sporulation stage V, protein K DB29_04099 008b0dee27de839f666de48105f4c779 313 Gene3D G3DSA:1.10.8.60 221 312 2.7E-17 T 14-10-2018 DB29_04099 008b0dee27de839f666de48105f4c779 313 SMART SM00382 85 223 1.4E-5 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_03707 a8ca17f0528e2cd59084527de1aa5ae8 535 Gene3D G3DSA:3.30.70.3280 390 528 3.1E-46 T 14-10-2018 IPR038467 Peptide chain release factor 3, C-terminal domain superfamily DB29_03707 a8ca17f0528e2cd59084527de1aa5ae8 535 Gene3D G3DSA:3.40.50.300 109 274 5.4E-104 T 14-10-2018 DB29_03707 a8ca17f0528e2cd59084527de1aa5ae8 535 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 57 72 - T 14-10-2018 IPR031157 Tr-type G domain, conserved site DB29_03707 a8ca17f0528e2cd59084527de1aa5ae8 535 Gene3D G3DSA:3.40.50.300 71 379 5.4E-104 T 14-10-2018 DB29_03707 a8ca17f0528e2cd59084527de1aa5ae8 535 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 16 147 1.1E-21 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 DB29_03707 a8ca17f0528e2cd59084527de1aa5ae8 535 Pfam PF00009 Elongation factor Tu GTP binding domain 13 274 4.8E-50 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DB29_03707 a8ca17f0528e2cd59084527de1aa5ae8 535 PRINTS PR00315 GTP-binding elongation factor signature 14 27 3.1E-9 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DB29_03707 a8ca17f0528e2cd59084527de1aa5ae8 535 PRINTS PR00315 GTP-binding elongation factor signature 136 145 3.1E-9 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DB29_03707 a8ca17f0528e2cd59084527de1aa5ae8 535 PRINTS PR00315 GTP-binding elongation factor signature 64 72 3.1E-9 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DB29_03707 a8ca17f0528e2cd59084527de1aa5ae8 535 PRINTS PR00315 GTP-binding elongation factor signature 84 94 3.1E-9 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DB29_03707 a8ca17f0528e2cd59084527de1aa5ae8 535 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 6 525 4.4E-212 T 14-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 DB29_03707 a8ca17f0528e2cd59084527de1aa5ae8 535 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 3 527 49.548 T 14-10-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 DB29_03707 a8ca17f0528e2cd59084527de1aa5ae8 535 SUPERFAMILY SSF50447 261 393 6.85E-28 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily DB29_03707 a8ca17f0528e2cd59084527de1aa5ae8 535 SUPERFAMILY SSF52540 12 276 8.47E-85 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_03707 a8ca17f0528e2cd59084527de1aa5ae8 535 Pfam PF03144 Elongation factor Tu domain 2 314 379 1.5E-8 T 14-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 DB29_03707 a8ca17f0528e2cd59084527de1aa5ae8 535 Pfam PF16658 Class II release factor RF3, C-terminal domain 387 514 6.0E-45 T 14-10-2018 IPR032090 Peptide chain release factor 3, C-terminal DB29_03707 a8ca17f0528e2cd59084527de1aa5ae8 535 SUPERFAMILY SSF54980 393 466 1.22E-12 T 14-10-2018 IPR035647 EF-G domain III/V-like DB29_03202 3825ca322945dc0bed28d8d0f6b16649 321 SUPERFAMILY SSF161098 94 302 3.27E-17 T 14-10-2018 IPR035906 MetI-like superfamily DB29_03202 3825ca322945dc0bed28d8d0f6b16649 321 Gene3D G3DSA:1.10.3720.10 87 315 1.0E-19 T 14-10-2018 IPR035906 MetI-like superfamily DB29_03202 3825ca322945dc0bed28d8d0f6b16649 321 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 319 7.6E-39 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DB29_01049 7258f57eadb934259513bc05d20fb058 222 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB29_01049 7258f57eadb934259513bc05d20fb058 222 Gene3D G3DSA:3.40.50.300 2 221 4.8E-65 T 14-10-2018 DB29_01049 7258f57eadb934259513bc05d20fb058 222 Pfam PF00005 ABC transporter 23 169 1.2E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB29_01049 7258f57eadb934259513bc05d20fb058 222 SMART SM00382 32 218 2.0E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_01049 7258f57eadb934259513bc05d20fb058 222 SUPERFAMILY SSF52540 4 220 3.13E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_03483 799f2da65e1de7db7c8edf11016dfba5 141 Pfam PF06103 Bacterial protein of unknown function (DUF948) 7 95 9.5E-28 T 14-10-2018 IPR009293 Uncharacterised protein family UPF0478 DB29_03483 799f2da65e1de7db7c8edf11016dfba5 141 Gene3D G3DSA:1.10.287.950 21 133 1.4E-5 T 14-10-2018 DB29_03509 2a1fdfca028c9457e942577e9b8ee970 395 Gene3D G3DSA:3.30.420.40 2 194 1.6E-76 T 14-10-2018 DB29_03509 2a1fdfca028c9457e942577e9b8ee970 395 Hamap MF_00020 Acetate kinase [ackA]. 1 395 198.496 T 14-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 DB29_03509 2a1fdfca028c9457e942577e9b8ee970 395 PIRSF PIRSF000722 1 395 2.0E-155 T 14-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 DB29_03509 2a1fdfca028c9457e942577e9b8ee970 395 PRINTS PR00471 Acetate kinase family signature 202 223 1.1E-47 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 DB29_03509 2a1fdfca028c9457e942577e9b8ee970 395 PRINTS PR00471 Acetate kinase family signature 375 387 1.1E-47 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 DB29_03509 2a1fdfca028c9457e942577e9b8ee970 395 PRINTS PR00471 Acetate kinase family signature 321 337 1.1E-47 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 DB29_03509 2a1fdfca028c9457e942577e9b8ee970 395 PRINTS PR00471 Acetate kinase family signature 299 312 1.1E-47 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 DB29_03509 2a1fdfca028c9457e942577e9b8ee970 395 PRINTS PR00471 Acetate kinase family signature 4 15 1.1E-47 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 DB29_03509 2a1fdfca028c9457e942577e9b8ee970 395 PRINTS PR00471 Acetate kinase family signature 172 185 1.1E-47 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 DB29_03509 2a1fdfca028c9457e942577e9b8ee970 395 Pfam PF00871 Acetokinase family 3 388 3.3E-170 T 14-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 DB29_03509 2a1fdfca028c9457e942577e9b8ee970 395 SUPERFAMILY SSF53067 156 393 2.99E-95 T 14-10-2018 DB29_03509 2a1fdfca028c9457e942577e9b8ee970 395 Gene3D G3DSA:3.30.420.40 195 395 2.5E-84 T 14-10-2018 DB29_03509 2a1fdfca028c9457e942577e9b8ee970 395 SUPERFAMILY SSF53067 1 193 2.98E-72 T 14-10-2018 DB29_03509 2a1fdfca028c9457e942577e9b8ee970 395 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 202 219 - T 14-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 DB29_03509 2a1fdfca028c9457e942577e9b8ee970 395 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 4 15 - T 14-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 DB29_03509 2a1fdfca028c9457e942577e9b8ee970 395 TIGRFAM TIGR00016 ackA: acetate kinase 2 394 2.9E-176 T 14-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 DB29_00441 63e1780040cce625b2b0b532b3e76e4b 589 Pfam PF01336 OB-fold nucleic acid binding domain 19 104 3.1E-16 T 14-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 DB29_00441 63e1780040cce625b2b0b532b3e76e4b 589 PRINTS PR01042 Aspartyl-tRNA synthetase signature 519 533 6.7E-26 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 DB29_00441 63e1780040cce625b2b0b532b3e76e4b 589 PRINTS PR01042 Aspartyl-tRNA synthetase signature 475 491 6.7E-26 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 DB29_00441 63e1780040cce625b2b0b532b3e76e4b 589 PRINTS PR01042 Aspartyl-tRNA synthetase signature 211 224 6.7E-26 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 DB29_00441 63e1780040cce625b2b0b532b3e76e4b 589 PRINTS PR01042 Aspartyl-tRNA synthetase signature 194 206 6.7E-26 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 DB29_00441 63e1780040cce625b2b0b532b3e76e4b 589 Gene3D G3DSA:2.40.50.140 1 107 1.5E-34 T 14-10-2018 DB29_00441 63e1780040cce625b2b0b532b3e76e4b 589 SUPERFAMILY SSF50249 3 107 4.0E-31 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DB29_00441 63e1780040cce625b2b0b532b3e76e4b 589 Gene3D G3DSA:3.30.930.10 122 577 1.0E-194 T 14-10-2018 DB29_00441 63e1780040cce625b2b0b532b3e76e4b 589 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 1 584 9.4E-257 T 14-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 DB29_00441 63e1780040cce625b2b0b532b3e76e4b 589 Pfam PF00152 tRNA synthetases class II (D, K and N) 122 558 1.7E-110 T 14-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 DB29_00441 63e1780040cce625b2b0b532b3e76e4b 589 SUPERFAMILY SSF55681 117 585 4.59E-108 T 14-10-2018 DB29_00441 63e1780040cce625b2b0b532b3e76e4b 589 Hamap MF_00044 Aspartate--tRNA(Asp/Asn) ligase [aspS]. 2 585 34.739 T 14-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 DB29_00441 63e1780040cce625b2b0b532b3e76e4b 589 Pfam PF02938 GAD domain 312 406 1.5E-31 T 14-10-2018 IPR029351 GAD domain Reactome: R-HSA-379726 DB29_00441 63e1780040cce625b2b0b532b3e76e4b 589 SUPERFAMILY SSF55261 293 420 3.76E-43 T 14-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 DB29_00441 63e1780040cce625b2b0b532b3e76e4b 589 Gene3D G3DSA:3.30.1360.30 276 420 1.0E-194 T 14-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 DB29_01389 a6663722e02ca3ed4e99d40e9db8b934 237 SUPERFAMILY SSF52467 4 221 2.99E-71 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily DB29_01389 a6663722e02ca3ed4e99d40e9db8b934 237 Pfam PF02146 Sir2 family 17 186 1.3E-47 T 14-10-2018 IPR003000 Sirtuin family GO:0070403 DB29_01389 a6663722e02ca3ed4e99d40e9db8b934 237 Gene3D G3DSA:3.30.1600.10 26 156 1.2E-76 T 14-10-2018 IPR026591 Sirtuin, catalytic core small domain superfamily DB29_01389 a6663722e02ca3ed4e99d40e9db8b934 237 Hamap MF_01968 NAD-dependent protein deacetylase [cobB]. 1 232 61.409 T 14-10-2018 IPR028628 Sirtuin, class U GO:0034979|GO:0051287 DB29_01389 a6663722e02ca3ed4e99d40e9db8b934 237 Gene3D G3DSA:3.40.50.1220 8 222 1.2E-76 T 14-10-2018 DB29_02358 dd8f0aaef28686ca7df9b538f313d05c 95 TIGRFAM TIGR02844 spore_III_D: sporulation transcriptional regulator SpoIIID 2 81 4.5E-45 T 14-10-2018 IPR014208 Sporulation stage III, transcriptional regulator SpoIIID DB29_02358 dd8f0aaef28686ca7df9b538f313d05c 95 Pfam PF12116 Stage III sporulation protein D 2 81 7.0E-41 T 14-10-2018 IPR014208 Sporulation stage III, transcriptional regulator SpoIIID DB29_02358 dd8f0aaef28686ca7df9b538f313d05c 95 ProSitePatterns PS00894 DeoR-type HTH domain signature. 8 41 - T 14-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 DB29_02358 dd8f0aaef28686ca7df9b538f313d05c 95 Gene3D G3DSA:1.10.10.60 1 93 1.3E-41 T 14-10-2018 DB29_03914 e93ec57ffff5cc66049d2f25df209973 325 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 48 60 9.0E-6 T 14-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DB29_03914 e93ec57ffff5cc66049d2f25df209973 325 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 5 322 24.23 T 14-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DB29_03914 e93ec57ffff5cc66049d2f25df209973 325 Pfam PF00953 Glycosyl transferase family 4 82 248 3.8E-35 T 14-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 DB29_03914 e93ec57ffff5cc66049d2f25df209973 325 ProSitePatterns PS01348 MraY family signature 2. 168 179 - T 14-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DB29_03914 e93ec57ffff5cc66049d2f25df209973 325 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 18 323 1.0E-118 T 14-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DB29_03914 e93ec57ffff5cc66049d2f25df209973 325 ProSitePatterns PS01347 MraY family signature 1. 48 60 - T 14-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DB29_03766 85fd9d0dd6f3cf01cdcd8c03d16dcd69 80 Pfam PF11117 Protein of unknown function (DUF2626) 1 74 1.3E-37 T 14-10-2018 IPR020254 Protein of unknown function DUF2626 DB29_03766 85fd9d0dd6f3cf01cdcd8c03d16dcd69 80 ProDom PD059814 YQGY TRANSMEMBRANE MEMBRANE PRECURSOR BH2821 SIGNAL 1 80 4.0E-39 T 14-10-2018 IPR020254 Protein of unknown function DUF2626 DB29_01364 d86e2c11e34861b8e24cb9ac818cca92 331 SUPERFAMILY SSF53659 2 327 3.22E-104 T 14-10-2018 DB29_01364 d86e2c11e34861b8e24cb9ac818cca92 331 Gene3D G3DSA:3.40.718.10 1 327 2.7E-122 T 14-10-2018 DB29_01364 d86e2c11e34861b8e24cb9ac818cca92 331 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 33 321 8.1E-98 T 14-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 DB29_01364 d86e2c11e34861b8e24cb9ac818cca92 331 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 6 324 3.6E-100 T 14-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 DB29_00666 3c39be787fa2bcf51a9b74cfb75b67d1 582 SUPERFAMILY SSF52540 333 578 1.41E-96 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_00666 3c39be787fa2bcf51a9b74cfb75b67d1 582 Pfam PF00664 ABC transporter transmembrane region 22 296 7.9E-40 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 DB29_00666 3c39be787fa2bcf51a9b74cfb75b67d1 582 Pfam PF00005 ABC transporter 359 508 3.2E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB29_00666 3c39be787fa2bcf51a9b74cfb75b67d1 582 ProSitePatterns PS00211 ABC transporters family signature. 480 494 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB29_00666 3c39be787fa2bcf51a9b74cfb75b67d1 582 SMART SM00382 368 554 1.9E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_00666 3c39be787fa2bcf51a9b74cfb75b67d1 582 SUPERFAMILY SSF90123 5 325 6.8E-75 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DB29_00666 3c39be787fa2bcf51a9b74cfb75b67d1 582 Gene3D G3DSA:3.40.50.300 334 581 5.9E-94 T 14-10-2018 DB29_00666 3c39be787fa2bcf51a9b74cfb75b67d1 582 Gene3D G3DSA:1.20.1560.10 3 325 2.5E-103 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DB29_01986 9833bf937fb383b1ebaf5f584138ae94 258 SUPERFAMILY SSF51556 1 254 1.48E-94 T 14-10-2018 IPR032466 Metal-dependent hydrolase DB29_01986 9833bf937fb383b1ebaf5f584138ae94 258 Pfam PF01026 TatD related DNase 3 252 6.9E-85 T 14-10-2018 IPR001130 TatD family GO:0016788 DB29_01986 9833bf937fb383b1ebaf5f584138ae94 258 PIRSF PIRSF005902 1 257 5.5E-89 T 14-10-2018 IPR001130 TatD family GO:0016788 DB29_01986 9833bf937fb383b1ebaf5f584138ae94 258 Gene3D G3DSA:3.20.20.140 1 258 3.9E-108 T 14-10-2018 DB29_01986 9833bf937fb383b1ebaf5f584138ae94 258 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 2 253 6.9E-95 T 14-10-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 DB29_01986 9833bf937fb383b1ebaf5f584138ae94 258 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 189 205 - T 14-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 DB29_01986 9833bf937fb383b1ebaf5f584138ae94 258 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 2 10 - T 14-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 DB29_01663 d9c0f86b54db6a4cb86b267ffc3ab560 222 Pfam PF00486 Transcriptional regulatory protein, C terminal 144 218 1.3E-24 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DB29_01663 d9c0f86b54db6a4cb86b267ffc3ab560 222 Gene3D G3DSA:1.10.10.10 122 222 1.7E-32 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_01663 d9c0f86b54db6a4cb86b267ffc3ab560 222 SMART SM00448 2 113 3.1E-42 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DB29_01663 d9c0f86b54db6a4cb86b267ffc3ab560 222 SMART SM00862 144 219 2.5E-24 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DB29_01663 d9c0f86b54db6a4cb86b267ffc3ab560 222 Pfam PF00072 Response regulator receiver domain 4 114 2.5E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DB29_01663 d9c0f86b54db6a4cb86b267ffc3ab560 222 Gene3D G3DSA:3.40.50.2300 1 121 8.0E-37 T 14-10-2018 DB29_01663 d9c0f86b54db6a4cb86b267ffc3ab560 222 SUPERFAMILY SSF52172 3 175 8.67E-38 T 14-10-2018 IPR011006 CheY-like superfamily DB29_0P0020 caf06b44c59670e0a3c029c4cb144d94 148 Gene3D G3DSA:3.40.140.10 22 148 2.2E-43 T 14-10-2018 DB29_0P0020 caf06b44c59670e0a3c029c4cb144d94 148 Pfam PF04002 RadC-like JAB domain 27 145 1.7E-41 T 14-10-2018 IPR025657 RadC-like JAB domain DB29_0P0020 caf06b44c59670e0a3c029c4cb144d94 148 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 96 101 - T 14-10-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site DB29_01553 669b69e4e537253f27c96b2d0c56c387 450 Gene3D G3DSA:3.90.550.10 1 220 6.3E-9 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DB29_01553 669b69e4e537253f27c96b2d0c56c387 450 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 299 332 0.0023 T 14-10-2018 IPR001451 Hexapeptide repeat DB29_01553 669b69e4e537253f27c96b2d0c56c387 450 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 263 297 1.0E-6 T 14-10-2018 IPR001451 Hexapeptide repeat DB29_01553 669b69e4e537253f27c96b2d0c56c387 450 SUPERFAMILY SSF51161 247 433 2.07E-28 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily DB29_01553 669b69e4e537253f27c96b2d0c56c387 450 SUPERFAMILY SSF53448 1 318 4.46E-17 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DB29_01553 669b69e4e537253f27c96b2d0c56c387 450 Gene3D G3DSA:2.160.10.10 223 433 9.5E-35 T 14-10-2018 DB29_01553 669b69e4e537253f27c96b2d0c56c387 450 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 271 299 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 DB29_03085 99013ece4d2b3e9c66b6bf75fb7d611d 289 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 131 142 - T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 DB29_03085 99013ece4d2b3e9c66b6bf75fb7d611d 289 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 3 283 2.2E-89 T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 DB29_03085 99013ece4d2b3e9c66b6bf75fb7d611d 289 Pfam PF01116 Fructose-bisphosphate aldolase class-II 5 282 1.4E-90 T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 DB29_03085 99013ece4d2b3e9c66b6bf75fb7d611d 289 PIRSF PIRSF001359 1 284 5.9E-94 T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 DB29_03085 99013ece4d2b3e9c66b6bf75fb7d611d 289 SUPERFAMILY SSF51569 5 283 2.75E-90 T 14-10-2018 DB29_03085 99013ece4d2b3e9c66b6bf75fb7d611d 289 Gene3D G3DSA:3.20.20.70 1 287 3.4E-98 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DB29_02354 ecf90d015b27ebfa99cb0cd6291cd3ff 346 Pfam PF08486 Stage II sporulation protein 73 178 1.0E-25 T 14-10-2018 IPR013693 Sporulation stage II protein D, amidase enhancer LytB N-terminal DB29_02354 ecf90d015b27ebfa99cb0cd6291cd3ff 346 TIGRFAM TIGR02669 SpoIID_LytB: SpoIID/LytB domain 77 337 1.8E-73 T 14-10-2018 IPR013486 Sporulation stage II protein D, amidase enhancer LytB GO:0030435 DB29_02354 ecf90d015b27ebfa99cb0cd6291cd3ff 346 TIGRFAM TIGR02870 spore_II_D: stage II sporulation protein D 2 339 3.8E-149 T 14-10-2018 IPR014225 Sporulation stage II, protein D firmicutes DB29_03003 c0226cbd7a04542216b34dbc5e9bf0d0 369 Gene3D G3DSA:1.50.10.10 1 366 3.6E-127 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 DB29_03003 c0226cbd7a04542216b34dbc5e9bf0d0 369 Pfam PF07470 Glycosyl Hydrolase Family 88 21 359 7.4E-29 T 14-10-2018 IPR010905 Glycosyl hydrolase, family 88 DB29_03003 c0226cbd7a04542216b34dbc5e9bf0d0 369 SUPERFAMILY SSF48208 7 364 1.11E-104 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 DB29_03482 bb368d88ee35340916d2a8f4c2f814cd 435 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 1 433 34.202 T 14-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DB29_03482 bb368d88ee35340916d2a8f4c2f814cd 435 Gene3D G3DSA:3.40.1190.10 91 292 1.2E-51 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 DB29_03482 bb368d88ee35340916d2a8f4c2f814cd 435 Gene3D G3DSA:3.90.190.20 293 433 9.9E-38 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 DB29_03482 bb368d88ee35340916d2a8f4c2f814cd 435 Pfam PF02875 Mur ligase family, glutamate ligase domain 295 377 1.3E-18 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 DB29_03482 bb368d88ee35340916d2a8f4c2f814cd 435 SUPERFAMILY SSF53623 90 292 4.97E-57 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 DB29_03482 bb368d88ee35340916d2a8f4c2f814cd 435 Gene3D G3DSA:3.40.50.720 2 88 6.4E-20 T 14-10-2018 DB29_03482 bb368d88ee35340916d2a8f4c2f814cd 435 SUPERFAMILY SSF51984 2 87 4.51E-19 T 14-10-2018 DB29_03482 bb368d88ee35340916d2a8f4c2f814cd 435 SUPERFAMILY SSF53244 294 427 2.2E-33 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 DB29_03482 bb368d88ee35340916d2a8f4c2f814cd 435 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 3 429 8.4E-126 T 14-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DB29_03482 bb368d88ee35340916d2a8f4c2f814cd 435 Pfam PF01225 Mur ligase family, catalytic domain 4 101 6.7E-20 T 14-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 DB29_03482 bb368d88ee35340916d2a8f4c2f814cd 435 Pfam PF08245 Mur ligase middle domain 106 275 7.5E-23 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 DB29_01375 5be7e2cf6d26331a28f03dabfe9902c4 356 Gene3D G3DSA:1.10.150.530 3 64 4.6E-17 T 14-10-2018 DB29_01375 5be7e2cf6d26331a28f03dabfe9902c4 356 Gene3D G3DSA:3.20.20.70 67 335 2.5E-94 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DB29_01375 5be7e2cf6d26331a28f03dabfe9902c4 356 Pfam PF04055 Radical SAM superfamily 106 278 2.3E-19 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 DB29_01375 5be7e2cf6d26331a28f03dabfe9902c4 356 Pfam PF13394 4Fe-4S single cluster domain 111 215 9.3E-7 T 14-10-2018 DB29_01375 5be7e2cf6d26331a28f03dabfe9902c4 356 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 3 354 2.8E-131 T 14-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 DB29_01375 5be7e2cf6d26331a28f03dabfe9902c4 356 SMART SM00729 102 319 0.0036 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 DB29_01375 5be7e2cf6d26331a28f03dabfe9902c4 356 PIRSF PIRSF006004 2 356 2.3E-132 T 14-10-2018 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 DB29_01375 5be7e2cf6d26331a28f03dabfe9902c4 356 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 3 350 71.665 T 14-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 DB29_01375 5be7e2cf6d26331a28f03dabfe9902c4 356 SUPERFAMILY SSF102114 97 318 6.41E-18 T 14-10-2018 DB29_04044 dfd3cc2e75d57ae98d5ee58cf1a5c2ef 1430 Gene3D G3DSA:3.30.1900.20 966 1088 5.7E-59 T 14-10-2018 DB29_04044 dfd3cc2e75d57ae98d5ee58cf1a5c2ef 1430 Gene3D G3DSA:3.20.20.140 552 798 4.6E-47 T 14-10-2018 DB29_04044 dfd3cc2e75d57ae98d5ee58cf1a5c2ef 1430 SUPERFAMILY SSF50249 232 317 1.71E-10 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DB29_04044 dfd3cc2e75d57ae98d5ee58cf1a5c2ef 1430 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 818 1231 2.4E-95 T 14-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DB29_04044 dfd3cc2e75d57ae98d5ee58cf1a5c2ef 1430 SUPERFAMILY SSF53098 415 870 4.74E-107 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily DB29_04044 dfd3cc2e75d57ae98d5ee58cf1a5c2ef 1430 Pfam PF02811 PHP domain 331 687 7.0E-55 T 14-10-2018 IPR004013 PHP domain GO:0003824 DB29_04044 dfd3cc2e75d57ae98d5ee58cf1a5c2ef 1430 Gene3D G3DSA:3.30.420.10 404 551 1.7E-43 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 DB29_04044 dfd3cc2e75d57ae98d5ee58cf1a5c2ef 1430 Gene3D G3DSA:1.10.100.20 988 1035 5.7E-59 T 14-10-2018 DB29_04044 dfd3cc2e75d57ae98d5ee58cf1a5c2ef 1430 Gene3D G3DSA:2.40.50.140 218 317 9.7E-31 T 14-10-2018 DB29_04044 dfd3cc2e75d57ae98d5ee58cf1a5c2ef 1430 Gene3D G3DSA:1.10.150.870 1280 1416 5.6E-51 T 14-10-2018 DB29_04044 dfd3cc2e75d57ae98d5ee58cf1a5c2ef 1430 SMART SM00481 330 397 1.1E-30 T 14-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal DB29_04044 dfd3cc2e75d57ae98d5ee58cf1a5c2ef 1430 Hamap MF_00356 DNA polymerase III PolC-type [polC]. 1 1430 442.179 T 14-10-2018 IPR006308 DNA polymerase III, alpha subunit, Gram-positive type GO:0003677|GO:0003887|GO:0005737|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DB29_04044 dfd3cc2e75d57ae98d5ee58cf1a5c2ef 1430 SMART SM00479 415 581 5.9E-51 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III DB29_04044 dfd3cc2e75d57ae98d5ee58cf1a5c2ef 1430 TIGRFAM TIGR01405 polC_Gram_pos: DNA polymerase III, alpha subunit, Gram-positive type 227 1430 0.0 T 14-10-2018 IPR006308 DNA polymerase III, alpha subunit, Gram-positive type GO:0003677|GO:0003887|GO:0005737|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DB29_04044 dfd3cc2e75d57ae98d5ee58cf1a5c2ef 1430 Pfam PF14480 DNA polymerase III polC-type N-terminus I 11 81 3.9E-18 T 14-10-2018 IPR028112 DNA polymerase III polC-type, N-terminal domain I KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DB29_04044 dfd3cc2e75d57ae98d5ee58cf1a5c2ef 1430 Pfam PF14579 Helix-hairpin-helix motif 1346 1423 2.0E-11 T 14-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DB29_04044 dfd3cc2e75d57ae98d5ee58cf1a5c2ef 1430 Pfam PF00929 Exonuclease 417 572 6.8E-41 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III DB29_04044 dfd3cc2e75d57ae98d5ee58cf1a5c2ef 1430 Gene3D G3DSA:1.10.150.700 1089 1178 1.3E-34 T 14-10-2018 DB29_04044 dfd3cc2e75d57ae98d5ee58cf1a5c2ef 1430 Gene3D G3DSA:1.10.150.700 1228 1279 6.1E-15 T 14-10-2018 DB29_04044 dfd3cc2e75d57ae98d5ee58cf1a5c2ef 1430 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 408 628 2.6E-59 T 14-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DB29_04044 dfd3cc2e75d57ae98d5ee58cf1a5c2ef 1430 Pfam PF11490 DNA polymerase III polC-type N-terminus II 96 208 2.0E-23 T 14-10-2018 IPR024754 DNA polymerase III polC-like, N-terminal domain II KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DB29_03601 88887dcb570aa4e81580054e33f0a946 198 SUPERFAMILY SSF52972 3 192 1.91E-67 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like DB29_03601 88887dcb570aa4e81580054e33f0a946 198 Gene3D G3DSA:3.90.950.10 1 196 5.9E-74 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like DB29_03601 88887dcb570aa4e81580054e33f0a946 198 Pfam PF01725 Ham1 family 4 190 2.4E-58 T 14-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 DB29_03601 88887dcb570aa4e81580054e33f0a946 198 Hamap MF_01405 dITP/XTP pyrophosphatase. 2 194 45.933 T 14-10-2018 IPR020922 dITP/XTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.66 DB29_03601 88887dcb570aa4e81580054e33f0a946 198 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 3 191 2.9E-59 T 14-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 DB29_00764 4e0da0b0d1debdfb9f17a65d13a7d6ea 446 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 27 433 1.8E-108 T 14-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 DB29_00764 4e0da0b0d1debdfb9f17a65d13a7d6ea 446 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 28 440 30.858 T 14-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 DB29_00764 4e0da0b0d1debdfb9f17a65d13a7d6ea 446 ProSitePatterns PS00885 EPSP synthase signature 2. 353 371 - T 14-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 DB29_00764 4e0da0b0d1debdfb9f17a65d13a7d6ea 446 PIRSF PIRSF000505 19 443 4.4E-138 T 14-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 DB29_00764 4e0da0b0d1debdfb9f17a65d13a7d6ea 446 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 34 438 1.0E-126 T 14-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 DB29_00764 4e0da0b0d1debdfb9f17a65d13a7d6ea 446 SUPERFAMILY SSF55205 25 440 3.14E-109 T 14-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 DB29_00764 4e0da0b0d1debdfb9f17a65d13a7d6ea 446 Gene3D G3DSA:3.65.10.10 40 257 1.2E-125 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 DB29_00764 4e0da0b0d1debdfb9f17a65d13a7d6ea 446 Gene3D G3DSA:3.65.10.10 32 430 1.2E-125 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 DB29_03576 6ad2fb925f6605d02992e8e0985a1258 571 SUPERFAMILY SSF89550 336 569 1.96E-56 T 14-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 DB29_03576 6ad2fb925f6605d02992e8e0985a1258 571 SUPERFAMILY SSF47802 4 80 2.49E-18 T 14-10-2018 IPR027421 DNA polymerase lambda lyase domain superfamily DB29_03576 6ad2fb925f6605d02992e8e0985a1258 571 Gene3D G3DSA:1.10.150.110 1 82 2.1E-18 T 14-10-2018 IPR027421 DNA polymerase lambda lyase domain superfamily DB29_03576 6ad2fb925f6605d02992e8e0985a1258 571 Gene3D G3DSA:1.10.150.20 83 148 3.4E-20 T 14-10-2018 DB29_03576 6ad2fb925f6605d02992e8e0985a1258 571 SUPERFAMILY SSF81301 152 315 1.44E-44 T 14-10-2018 DB29_03576 6ad2fb925f6605d02992e8e0985a1258 571 Pfam PF14716 Helix-hairpin-helix domain 4 67 4.4E-17 T 14-10-2018 IPR010996 DNA polymerase beta-like, N-terminal domain DB29_03576 6ad2fb925f6605d02992e8e0985a1258 571 Pfam PF14520 Helix-hairpin-helix domain 90 143 2.3E-7 T 14-10-2018 DB29_03576 6ad2fb925f6605d02992e8e0985a1258 571 SMART SM00483 1 315 5.7E-62 T 14-10-2018 IPR002054 DNA-directed DNA polymerase X GO:0003677|GO:0003887 DB29_03576 6ad2fb925f6605d02992e8e0985a1258 571 Gene3D G3DSA:3.30.210.10 260 324 4.9E-16 T 14-10-2018 IPR037160 DNA polymerase, thumb domain superfamily DB29_03576 6ad2fb925f6605d02992e8e0985a1258 571 Gene3D G3DSA:3.20.20.140 325 571 3.6E-77 T 14-10-2018 DB29_03576 6ad2fb925f6605d02992e8e0985a1258 571 Gene3D G3DSA:3.30.460.10 152 259 8.2E-22 T 14-10-2018 DB29_03576 6ad2fb925f6605d02992e8e0985a1258 571 PIRSF PIRSF005047 1 571 7.7E-238 T 14-10-2018 IPR022311 Uncharacterised conserved protein UCP005047, YshC KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DB29_03576 6ad2fb925f6605d02992e8e0985a1258 571 Pfam PF14791 DNA polymerase beta thumb 253 315 1.5E-18 T 14-10-2018 IPR029398 DNA polymerase beta, thumb domain DB29_03576 6ad2fb925f6605d02992e8e0985a1258 571 SMART SM00481 337 416 2.2E-21 T 14-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal DB29_03576 6ad2fb925f6605d02992e8e0985a1258 571 PRINTS PR00870 DNA-polymerase family X pol beta-like signature 253 260 2.3E-5 T 14-10-2018 IPR002008 DNA polymerase family X, beta-like GO:0003677|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DB29_03576 6ad2fb925f6605d02992e8e0985a1258 571 PRINTS PR00870 DNA-polymerase family X pol beta-like signature 238 246 2.3E-5 T 14-10-2018 IPR002008 DNA polymerase family X, beta-like GO:0003677|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DB29_03576 6ad2fb925f6605d02992e8e0985a1258 571 PRINTS PR00870 DNA-polymerase family X pol beta-like signature 55 72 2.3E-5 T 14-10-2018 IPR002008 DNA polymerase family X, beta-like GO:0003677|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DB29_03576 6ad2fb925f6605d02992e8e0985a1258 571 PRINTS PR00870 DNA-polymerase family X pol beta-like signature 297 314 2.3E-5 T 14-10-2018 IPR002008 DNA polymerase family X, beta-like GO:0003677|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DB29_03576 6ad2fb925f6605d02992e8e0985a1258 571 Pfam PF02811 PHP domain 338 430 1.9E-11 T 14-10-2018 IPR004013 PHP domain GO:0003824 DB29_01343 d79a1a20d09a66ba10e4724a2c8f6c85 567 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 167 180 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 DB29_01343 d79a1a20d09a66ba10e4724a2c8f6c85 567 Gene3D G3DSA:3.30.420.40 4 339 7.3E-110 T 14-10-2018 DB29_01343 d79a1a20d09a66ba10e4724a2c8f6c85 567 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 6 13 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 DB29_01343 d79a1a20d09a66ba10e4724a2c8f6c85 567 PRINTS PR00301 70kDa heat shock protein signature 53 61 2.1E-42 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DB29_01343 d79a1a20d09a66ba10e4724a2c8f6c85 567 PRINTS PR00301 70kDa heat shock protein signature 2 15 2.1E-42 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DB29_01343 d79a1a20d09a66ba10e4724a2c8f6c85 567 PRINTS PR00301 70kDa heat shock protein signature 30 42 2.1E-42 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DB29_01343 d79a1a20d09a66ba10e4724a2c8f6c85 567 PRINTS PR00301 70kDa heat shock protein signature 296 312 2.1E-42 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DB29_01343 d79a1a20d09a66ba10e4724a2c8f6c85 567 PRINTS PR00301 70kDa heat shock protein signature 327 347 2.1E-42 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DB29_01343 d79a1a20d09a66ba10e4724a2c8f6c85 567 PRINTS PR00301 70kDa heat shock protein signature 352 371 2.1E-42 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DB29_01343 d79a1a20d09a66ba10e4724a2c8f6c85 567 PRINTS PR00301 70kDa heat shock protein signature 441 457 2.1E-42 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DB29_01343 d79a1a20d09a66ba10e4724a2c8f6c85 567 PRINTS PR00301 70kDa heat shock protein signature 173 183 2.1E-42 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DB29_01343 d79a1a20d09a66ba10e4724a2c8f6c85 567 PRINTS PR00301 70kDa heat shock protein signature 113 133 2.1E-42 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DB29_01343 d79a1a20d09a66ba10e4724a2c8f6c85 567 SUPERFAMILY SSF53067 3 158 3.89E-52 T 14-10-2018 DB29_01343 d79a1a20d09a66ba10e4724a2c8f6c85 567 Gene3D G3DSA:3.90.640.10 199 271 7.3E-110 T 14-10-2018 DB29_01343 d79a1a20d09a66ba10e4724a2c8f6c85 567 SUPERFAMILY SSF100920 351 511 5.1E-40 T 14-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 DB29_01343 d79a1a20d09a66ba10e4724a2c8f6c85 567 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 299 313 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 DB29_01343 d79a1a20d09a66ba10e4724a2c8f6c85 567 Gene3D G3DSA:2.60.34.10 341 528 1.3E-47 T 14-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 DB29_01343 d79a1a20d09a66ba10e4724a2c8f6c85 567 Gene3D G3DSA:3.30.420.40 159 329 7.3E-110 T 14-10-2018 DB29_01343 d79a1a20d09a66ba10e4724a2c8f6c85 567 Pfam PF00012 Hsp70 protein 4 75 2.1E-16 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DB29_01343 d79a1a20d09a66ba10e4724a2c8f6c85 567 Pfam PF00012 Hsp70 protein 82 548 3.6E-120 T 14-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 DB29_01343 d79a1a20d09a66ba10e4724a2c8f6c85 567 SUPERFAMILY SSF53067 162 342 2.12E-44 T 14-10-2018 DB29_00350 c83eeaa28d8f99fd07ae6374efbfeab2 342 Gene3D G3DSA:3.30.390.60 128 229 1.5E-55 T 14-10-2018 IPR023120 Winged helix-turn-helix transcription repressor, HrcA, inserted dimerising domain superfamily DB29_00350 c83eeaa28d8f99fd07ae6374efbfeab2 342 PIRSF PIRSF005485 1 340 4.8E-118 T 14-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 DB29_00350 c83eeaa28d8f99fd07ae6374efbfeab2 342 Hamap MF_00081 Heat-inducible transcription repressor HrcA [hrcA]. 1 330 32.133 T 14-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 DB29_00350 c83eeaa28d8f99fd07ae6374efbfeab2 342 SUPERFAMILY SSF55781 71 339 1.12E-67 T 14-10-2018 DB29_00350 c83eeaa28d8f99fd07ae6374efbfeab2 342 Pfam PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding 1 72 1.1E-4 T 14-10-2018 IPR005104 Winged helix-turn-helix transcription repressor, HrcA DNA-binding domain GO:0003677|GO:0006355 DB29_00350 c83eeaa28d8f99fd07ae6374efbfeab2 342 Gene3D G3DSA:1.10.10.10 1 85 1.1E-33 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_00350 c83eeaa28d8f99fd07ae6374efbfeab2 342 SUPERFAMILY SSF46785 1 83 5.3E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_00350 c83eeaa28d8f99fd07ae6374efbfeab2 342 TIGRFAM TIGR00331 hrcA: heat-inducible transcription repressor HrcA 3 335 2.6E-105 T 14-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 DB29_00350 c83eeaa28d8f99fd07ae6374efbfeab2 342 Pfam PF01628 HrcA protein C terminal domain 104 323 7.7E-66 T 14-10-2018 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal GO:0003677|GO:0006355 DB29_00350 c83eeaa28d8f99fd07ae6374efbfeab2 342 Gene3D G3DSA:3.30.450.40 104 335 1.5E-55 T 14-10-2018 IPR029016 GAF-like domain superfamily DB29_03263 32afa606cc26e03779b2d1172b75ba33 324 Pfam PF02650 WhiA C-terminal HTH domain 221 305 7.6E-36 T 14-10-2018 IPR023054 Sporulation regulator WhiA, C-terminal DB29_03263 32afa606cc26e03779b2d1172b75ba33 324 Gene3D G3DSA:3.10.28.10 1 216 1.3E-63 T 14-10-2018 IPR027434 Homing endonuclease DB29_03263 32afa606cc26e03779b2d1172b75ba33 324 Hamap MF_01420 Putative sporulation transcription regulator WhiA [whiA]. 3 308 35.095 T 14-10-2018 IPR003802 Sporulation regulator WhiA GO:0043937 DB29_03263 32afa606cc26e03779b2d1172b75ba33 324 TIGRFAM TIGR00647 DNA_bind_WhiA: DNA-binding protein WhiA 4 306 7.8E-129 T 14-10-2018 IPR033981 Sporulation regulator WhiA-like DB29_03263 32afa606cc26e03779b2d1172b75ba33 324 SUPERFAMILY SSF55608 122 222 9.64E-19 T 14-10-2018 IPR027434 Homing endonuclease DB29_03263 32afa606cc26e03779b2d1172b75ba33 324 Gene3D G3DSA:1.10.10.10 217 310 1.4E-37 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_03263 32afa606cc26e03779b2d1172b75ba33 324 Pfam PF14527 WhiA LAGLIDADG-like domain 126 218 1.5E-36 T 14-10-2018 IPR039518 WhiA, LAGLIDADG-like domain DB29_03263 32afa606cc26e03779b2d1172b75ba33 324 Pfam PF10298 WhiA N-terminal LAGLIDADG-like domain 18 104 6.0E-36 T 14-10-2018 IPR018478 Sporulation transcription regulator WhiA, N-terminal domain DB29_02944 5a2265bffbeca590ba64c98e83354579 201 ProSitePatterns PS00622 LuxR-type HTH domain signature. 155 182 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DB29_02944 5a2265bffbeca590ba64c98e83354579 201 Pfam PF00196 Bacterial regulatory proteins, luxR family 140 195 7.6E-15 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DB29_02944 5a2265bffbeca590ba64c98e83354579 201 SUPERFAMILY SSF52172 1 132 7.4E-27 T 14-10-2018 IPR011006 CheY-like superfamily DB29_02944 5a2265bffbeca590ba64c98e83354579 201 SMART SM00448 2 115 7.2E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DB29_02944 5a2265bffbeca590ba64c98e83354579 201 SMART SM00421 138 195 1.6E-13 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DB29_02944 5a2265bffbeca590ba64c98e83354579 201 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 141 155 4.6E-8 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DB29_02944 5a2265bffbeca590ba64c98e83354579 201 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 155 171 4.6E-8 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DB29_02944 5a2265bffbeca590ba64c98e83354579 201 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 171 183 4.6E-8 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DB29_02944 5a2265bffbeca590ba64c98e83354579 201 Gene3D G3DSA:3.40.50.12740 2 201 6.4E-48 T 14-10-2018 DB29_02944 5a2265bffbeca590ba64c98e83354579 201 Pfam PF00072 Response regulator receiver domain 4 115 5.1E-20 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DB29_02944 5a2265bffbeca590ba64c98e83354579 201 SUPERFAMILY SSF46894 124 201 4.08E-16 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DB29_04139 d3f9289cdc094af00ed8574522f4bf44 280 Pfam PF00561 alpha/beta hydrolase fold 34 135 6.5E-21 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DB29_04139 d3f9289cdc094af00ed8574522f4bf44 280 PRINTS PR00111 Alpha/beta hydrolase fold signature 223 237 1.5E-15 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DB29_04139 d3f9289cdc094af00ed8574522f4bf44 280 PRINTS PR00111 Alpha/beta hydrolase fold signature 103 116 1.5E-15 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DB29_04139 d3f9289cdc094af00ed8574522f4bf44 280 PRINTS PR00111 Alpha/beta hydrolase fold signature 58 73 1.5E-15 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DB29_04139 d3f9289cdc094af00ed8574522f4bf44 280 PRINTS PR00111 Alpha/beta hydrolase fold signature 117 130 1.5E-15 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DB29_04139 d3f9289cdc094af00ed8574522f4bf44 280 SUPERFAMILY SSF53474 11 279 1.49E-56 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DB29_04139 d3f9289cdc094af00ed8574522f4bf44 280 Pfam PF08386 TAP-like protein 220 279 3.1E-5 T 14-10-2018 IPR013595 Peptidase S33 tripeptidyl aminopeptidase-like, C-terminal DB29_04139 d3f9289cdc094af00ed8574522f4bf44 280 Gene3D G3DSA:3.40.50.1820 7 280 3.3E-60 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DB29_04139 d3f9289cdc094af00ed8574522f4bf44 280 PRINTS PR00412 Epoxide hydrolase signature 254 276 2.4E-6 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 DB29_04139 d3f9289cdc094af00ed8574522f4bf44 280 PRINTS PR00412 Epoxide hydrolase signature 39 57 2.4E-6 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 DB29_04139 d3f9289cdc094af00ed8574522f4bf44 280 PRINTS PR00412 Epoxide hydrolase signature 117 130 2.4E-6 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 DB29_04139 d3f9289cdc094af00ed8574522f4bf44 280 PRINTS PR00412 Epoxide hydrolase signature 103 116 2.4E-6 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 DB29_02663 3f346ed6f4b4bf190620b3457c4f0ef5 866 Gene3D G3DSA:3.30.470.20 185 314 1.0E-46 T 14-10-2018 DB29_02663 3f346ed6f4b4bf190620b3457c4f0ef5 866 Pfam PF00391 PEP-utilising enzyme, mobile domain 788 859 4.8E-22 T 14-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 DB29_02663 3f346ed6f4b4bf190620b3457c4f0ef5 866 SUPERFAMILY SSF52009 758 862 4.97E-28 T 14-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 DB29_02663 3f346ed6f4b4bf190620b3457c4f0ef5 866 Gene3D G3DSA:3.30.1490.20 1 184 1.4E-69 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 DB29_02663 3f346ed6f4b4bf190620b3457c4f0ef5 866 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 18 316 3.5E-97 T 14-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 DB29_02663 3f346ed6f4b4bf190620b3457c4f0ef5 866 Gene3D G3DSA:3.50.30.10 761 865 2.2E-31 T 14-10-2018 DB29_02663 3f346ed6f4b4bf190620b3457c4f0ef5 866 SUPERFAMILY SSF56059 1 342 1.77E-97 T 14-10-2018 DB29_03282 cf9da525029ee03d89b47d5bea1ccba7 234 Gene3D G3DSA:1.20.120.530 86 224 1.2E-29 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DB29_03282 cf9da525029ee03d89b47d5bea1ccba7 234 Gene3D G3DSA:1.10.10.10 12 82 1.1E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_03282 cf9da525029ee03d89b47d5bea1ccba7 234 SMART SM00345 23 81 1.6E-14 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DB29_03282 cf9da525029ee03d89b47d5bea1ccba7 234 SMART SM00895 91 215 1.1E-21 T 14-10-2018 IPR011711 GntR, C-terminal DB29_03282 cf9da525029ee03d89b47d5bea1ccba7 234 Pfam PF00392 Bacterial regulatory proteins, gntR family 23 81 2.4E-15 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DB29_03282 cf9da525029ee03d89b47d5bea1ccba7 234 SUPERFAMILY SSF46785 18 85 5.51E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_03282 cf9da525029ee03d89b47d5bea1ccba7 234 SUPERFAMILY SSF48008 88 222 6.28E-29 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DB29_03282 cf9da525029ee03d89b47d5bea1ccba7 234 Pfam PF07729 FCD domain 91 214 1.8E-25 T 14-10-2018 IPR011711 GntR, C-terminal DB29_00297 bd55ce00189678ee7e10ef99a6f8eee7 194 Pfam PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) 5 181 4.9E-10 T 14-10-2018 IPR010708 5'(3')-deoxyribonucleotidase GO:0008253|GO:0009264 Reactome: R-HSA-73621 DB29_00297 bd55ce00189678ee7e10ef99a6f8eee7 194 Gene3D G3DSA:3.40.50.1000 1 156 1.1E-8 T 14-10-2018 IPR023214 HAD superfamily DB29_00297 bd55ce00189678ee7e10ef99a6f8eee7 194 PIRSF PIRSF021362 2 191 5.1E-78 T 14-10-2018 IPR009206 Nucleotidase, putative DB29_00297 bd55ce00189678ee7e10ef99a6f8eee7 194 SUPERFAMILY SSF56784 3 163 1.37E-17 T 14-10-2018 IPR036412 HAD-like superfamily DB29_00668 ee1c3f132d04ab796cd34df7f6daca55 50 Pfam PF04259 Small, acid-soluble spore protein, gamma-type 6 49 1.1E-10 T 14-10-2018 IPR006341 Acid-soluble spore protein, gamma-type GO:0030435 DB29_00668 ee1c3f132d04ab796cd34df7f6daca55 50 TIGRFAM TIGR01442 SASP_gamma: small, acid-soluble spore protein, gamma-type 5 49 1.6E-15 T 14-10-2018 IPR006341 Acid-soluble spore protein, gamma-type GO:0030435 DB29_01838 6d3d6eed342d0d4f385230dd397e4660 633 Pfam PF00158 Sigma-54 interaction domain 324 491 2.5E-66 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 DB29_01838 6d3d6eed342d0d4f385230dd397e4660 633 Pfam PF06506 Propionate catabolism activator 47 189 5.9E-26 T 14-10-2018 IPR010524 Signal transduction response regulator, propionate catabolism activator, N-terminal GO:0000156|GO:0000160|GO:0003677|GO:0005524 DB29_01838 6d3d6eed342d0d4f385230dd397e4660 633 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 348 361 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 DB29_01838 6d3d6eed342d0d4f385230dd397e4660 633 SMART SM00382 344 488 1.6E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_01838 6d3d6eed342d0d4f385230dd397e4660 633 Gene3D G3DSA:3.40.50.2300 48 183 2.2E-23 T 14-10-2018 DB29_01838 6d3d6eed342d0d4f385230dd397e4660 633 Gene3D G3DSA:1.10.8.60 496 576 3.1E-14 T 14-10-2018 DB29_01838 6d3d6eed342d0d4f385230dd397e4660 633 Gene3D G3DSA:3.40.50.300 310 495 2.1E-65 T 14-10-2018 DB29_01838 6d3d6eed342d0d4f385230dd397e4660 633 Gene3D G3DSA:3.30.450.20 199 301 2.3E-9 T 14-10-2018 DB29_01838 6d3d6eed342d0d4f385230dd397e4660 633 SUPERFAMILY SSF52540 323 567 8.95E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_01838 6d3d6eed342d0d4f385230dd397e4660 633 SUPERFAMILY SSF159800 20 187 8.11E-23 T 14-10-2018 DB29_01838 6d3d6eed342d0d4f385230dd397e4660 633 Gene3D G3DSA:3.40.50.10660 77 169 2.2E-23 T 14-10-2018 DB29_01838 6d3d6eed342d0d4f385230dd397e4660 633 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 411 426 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 DB29_03459 9d1f7a8999bbeecfa3871e57fe49862e 647 Gene3D G3DSA:1.10.8.60 522 599 1.8E-24 T 14-10-2018 DB29_03459 9d1f7a8999bbeecfa3871e57fe49862e 647 Gene3D G3DSA:1.10.10.60 600 646 1.2E-12 T 14-10-2018 DB29_03459 9d1f7a8999bbeecfa3871e57fe49862e 647 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 608 625 8.5E-10 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DB29_03459 9d1f7a8999bbeecfa3871e57fe49862e 647 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 625 645 8.5E-10 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DB29_03459 9d1f7a8999bbeecfa3871e57fe49862e 647 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 374 387 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 DB29_03459 9d1f7a8999bbeecfa3871e57fe49862e 647 SMART SM00382 370 514 1.1E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_03459 9d1f7a8999bbeecfa3871e57fe49862e 647 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 437 452 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 DB29_03459 9d1f7a8999bbeecfa3871e57fe49862e 647 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 564 573 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site DB29_03459 9d1f7a8999bbeecfa3871e57fe49862e 647 Pfam PF02954 Bacterial regulatory protein, Fis family 604 642 3.8E-11 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DB29_03459 9d1f7a8999bbeecfa3871e57fe49862e 647 SUPERFAMILY SSF46689 591 644 9.56E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DB29_03459 9d1f7a8999bbeecfa3871e57fe49862e 647 Pfam PF00158 Sigma-54 interaction domain 351 517 5.4E-67 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 DB29_03459 9d1f7a8999bbeecfa3871e57fe49862e 647 Gene3D G3DSA:3.30.450.40 29 261 3.3E-44 T 14-10-2018 IPR029016 GAF-like domain superfamily DB29_03459 9d1f7a8999bbeecfa3871e57fe49862e 647 Gene3D G3DSA:3.40.50.300 337 521 1.9E-64 T 14-10-2018 DB29_03459 9d1f7a8999bbeecfa3871e57fe49862e 647 SUPERFAMILY SSF52540 350 594 4.4E-71 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_03931 80ef36c228c78e497fda0780dde1bdc4 933 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 67 78 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 DB29_03931 80ef36c228c78e497fda0780dde1bdc4 933 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 24 842 0.0 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 DB29_03931 80ef36c228c78e497fda0780dde1bdc4 933 Gene3D G3DSA:3.90.740.10 204 408 9.6E-256 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 DB29_03931 80ef36c228c78e497fda0780dde1bdc4 933 SUPERFAMILY SSF50677 213 403 1.36E-56 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 DB29_03931 80ef36c228c78e497fda0780dde1bdc4 933 Pfam PF08264 Anticodon-binding domain of tRNA 690 839 6.3E-28 T 14-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 DB29_03931 80ef36c228c78e497fda0780dde1bdc4 933 Gene3D G3DSA:1.10.730.20 642 928 2.6E-98 T 14-10-2018 DB29_03931 80ef36c228c78e497fda0780dde1bdc4 933 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 11 926 20.871 T 14-10-2018 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-379726 DB29_03931 80ef36c228c78e497fda0780dde1bdc4 933 Gene3D G3DSA:3.40.50.620 34 631 9.6E-256 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DB29_03931 80ef36c228c78e497fda0780dde1bdc4 933 SUPERFAMILY SSF47323 654 925 2.62E-73 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 DB29_03931 80ef36c228c78e497fda0780dde1bdc4 933 Pfam PF06827 Zinc finger found in FPG and IleRS 895 923 1.9E-5 T 14-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 DB29_03931 80ef36c228c78e497fda0780dde1bdc4 933 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 37 642 1.1E-215 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 DB29_03931 80ef36c228c78e497fda0780dde1bdc4 933 SUPERFAMILY SSF52374 11 650 3.68E-152 T 14-10-2018 DB29_03931 80ef36c228c78e497fda0780dde1bdc4 933 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 563 572 3.3E-32 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 DB29_03931 80ef36c228c78e497fda0780dde1bdc4 933 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 401 416 3.3E-32 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 DB29_03931 80ef36c228c78e497fda0780dde1bdc4 933 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 60 71 3.3E-32 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 DB29_03931 80ef36c228c78e497fda0780dde1bdc4 933 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 239 262 3.3E-32 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 DB29_03931 80ef36c228c78e497fda0780dde1bdc4 933 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 529 542 3.3E-32 T 14-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 DB29_01100 dc2b99d233cafd6e76b0e3aaba09b4df 985 Gene3D G3DSA:2.20.25.90 257 312 1.9E-19 T 14-10-2018 DB29_01100 dc2b99d233cafd6e76b0e3aaba09b4df 985 PIRSF PIRSF036643 2 964 0.0 T 14-10-2018 DB29_01100 dc2b99d233cafd6e76b0e3aaba09b4df 985 SMART SM00929 84 125 5.0E-11 T 14-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DB29_01100 dc2b99d233cafd6e76b0e3aaba09b4df 985 Gene3D G3DSA:3.40.228.10 392 591 2.3E-161 T 14-10-2018 DB29_01100 dc2b99d233cafd6e76b0e3aaba09b4df 985 SMART SM00926 257 311 1.1E-17 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DB29_01100 dc2b99d233cafd6e76b0e3aaba09b4df 985 Gene3D G3DSA:3.30.70.20 126 208 4.6E-18 T 14-10-2018 DB29_01100 dc2b99d233cafd6e76b0e3aaba09b4df 985 Gene3D G3DSA:3.10.20.740 5 125 7.1E-25 T 14-10-2018 DB29_01100 dc2b99d233cafd6e76b0e3aaba09b4df 985 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 87 123 1.7E-9 T 14-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DB29_01100 dc2b99d233cafd6e76b0e3aaba09b4df 985 TIGRFAM TIGR01591 Fdh-alpha: formate dehydrogenase, alpha subunit 262 930 4.3E-250 T 14-10-2018 IPR006478 Formate dehydrogenase, alpha subunit GO:0008863|GO:0015942|GO:0055114 KEGG: 00630+1.17.1.9|KEGG: 00680+1.17.1.9|MetaCyc: PWY-1881|MetaCyc: PWY-5497|MetaCyc: PWY-6696|MetaCyc: PWY-7985 DB29_01100 dc2b99d233cafd6e76b0e3aaba09b4df 985 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 3 77 2.5E-9 T 14-10-2018 DB29_01100 dc2b99d233cafd6e76b0e3aaba09b4df 985 Gene3D G3DSA:3.40.50.740 319 780 2.3E-161 T 14-10-2018 DB29_01100 dc2b99d233cafd6e76b0e3aaba09b4df 985 Gene3D G3DSA:2.40.40.20 814 939 9.3E-27 T 14-10-2018 DB29_01100 dc2b99d233cafd6e76b0e3aaba09b4df 985 Pfam PF01568 Molydopterin dinucleotide binding domain 822 927 1.1E-19 T 14-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 DB29_01100 dc2b99d233cafd6e76b0e3aaba09b4df 985 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 190 201 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DB29_01100 dc2b99d233cafd6e76b0e3aaba09b4df 985 SUPERFAMILY SSF53706 252 775 7.46E-193 T 14-10-2018 DB29_01100 dc2b99d233cafd6e76b0e3aaba09b4df 985 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 259 311 2.4E-18 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DB29_01100 dc2b99d233cafd6e76b0e3aaba09b4df 985 SUPERFAMILY SSF54862 139 214 5.02E-15 T 14-10-2018 DB29_01100 dc2b99d233cafd6e76b0e3aaba09b4df 985 Pfam PF00384 Molybdopterin oxidoreductase 314 737 1.8E-79 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DB29_01100 dc2b99d233cafd6e76b0e3aaba09b4df 985 Pfam PF00037 4Fe-4S binding domain 184 205 1.5E-4 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DB29_01100 dc2b99d233cafd6e76b0e3aaba09b4df 985 Pfam PF00037 4Fe-4S binding domain 141 157 5.7E-5 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DB29_01100 dc2b99d233cafd6e76b0e3aaba09b4df 985 SUPERFAMILY SSF50692 794 932 8.7E-33 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily DB29_01100 dc2b99d233cafd6e76b0e3aaba09b4df 985 SUPERFAMILY SSF54292 6 124 1.65E-26 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 DB29_01960 ec5f46a962218d92d226e2e46bde5432 321 SUPERFAMILY SSF51735 103 289 1.58E-60 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_01960 ec5f46a962218d92d226e2e46bde5432 321 Gene3D G3DSA:3.40.50.720 98 289 6.5E-111 T 14-10-2018 DB29_01960 ec5f46a962218d92d226e2e46bde5432 321 Gene3D G3DSA:3.40.50.720 6 315 6.5E-111 T 14-10-2018 DB29_01960 ec5f46a962218d92d226e2e46bde5432 321 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 109 289 1.5E-66 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 DB29_01960 ec5f46a962218d92d226e2e46bde5432 321 SUPERFAMILY SSF52283 3 134 2.34E-27 T 14-10-2018 DB29_01960 ec5f46a962218d92d226e2e46bde5432 321 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 7 319 2.9E-24 T 14-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 DB29_01960 ec5f46a962218d92d226e2e46bde5432 321 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 228 244 - T 14-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site DB29_01960 ec5f46a962218d92d226e2e46bde5432 321 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 150 178 - T 14-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 DB29_01535 0b8fe95a5a4f2211f1208d5d7f1fae05 407 Pfam PF07690 Major Facilitator Superfamily 13 351 7.8E-23 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DB29_01535 0b8fe95a5a4f2211f1208d5d7f1fae05 407 SUPERFAMILY SSF103473 6 395 1.7E-42 T 14-10-2018 IPR036259 MFS transporter superfamily DB29_01535 0b8fe95a5a4f2211f1208d5d7f1fae05 407 Gene3D G3DSA:1.20.1250.20 3 391 2.2E-33 T 14-10-2018 DB29_01788 e0fecdf52cc82dd933c1f80485a2a107 468 Pfam PF00392 Bacterial regulatory proteins, gntR family 8 70 1.1E-16 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DB29_01788 e0fecdf52cc82dd933c1f80485a2a107 468 SUPERFAMILY SSF53383 101 461 1.79E-73 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DB29_01788 e0fecdf52cc82dd933c1f80485a2a107 468 SUPERFAMILY SSF46785 9 74 1.57E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_01788 e0fecdf52cc82dd933c1f80485a2a107 468 Pfam PF00155 Aminotransferase class I and II 110 452 1.6E-24 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 DB29_01788 e0fecdf52cc82dd933c1f80485a2a107 468 Gene3D G3DSA:1.10.10.10 8 74 1.2E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_01788 e0fecdf52cc82dd933c1f80485a2a107 468 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 30 44 2.6E-6 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DB29_01788 e0fecdf52cc82dd933c1f80485a2a107 468 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 44 60 2.6E-6 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DB29_01788 e0fecdf52cc82dd933c1f80485a2a107 468 Gene3D G3DSA:3.90.1150.10 105 457 8.8E-83 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DB29_01788 e0fecdf52cc82dd933c1f80485a2a107 468 SMART SM00345 11 70 2.4E-18 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DB29_01788 e0fecdf52cc82dd933c1f80485a2a107 468 Gene3D G3DSA:3.40.640.10 143 356 8.8E-83 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DB29_02747 9078a659ad9b455dc4e5a870c95c8d28 670 Gene3D G3DSA:3.20.20.80 1 394 3.1E-138 T 14-10-2018 DB29_02747 9078a659ad9b455dc4e5a870c95c8d28 670 Pfam PF08533 Beta-galactosidase C-terminal domain 613 668 1.3E-17 T 14-10-2018 IPR013739 Beta-galactosidase C-terminal GO:0004565|GO:0006012 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 DB29_02747 9078a659ad9b455dc4e5a870c95c8d28 670 Gene3D G3DSA:3.40.50.880 396 607 1.4E-63 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like DB29_02747 9078a659ad9b455dc4e5a870c95c8d28 670 SUPERFAMILY SSF52317 395 602 8.85E-62 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like DB29_02747 9078a659ad9b455dc4e5a870c95c8d28 670 SUPERFAMILY SSF51445 1 367 4.58E-113 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily DB29_02747 9078a659ad9b455dc4e5a870c95c8d28 670 Gene3D G3DSA:2.60.40.1180 612 668 4.0E-9 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta DB29_02747 9078a659ad9b455dc4e5a870c95c8d28 670 PIRSF PIRSF001084 1 669 5.3E-249 T 14-10-2018 IPR003476 Glycoside hydrolase, family 42 GO:0004565|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 DB29_02747 9078a659ad9b455dc4e5a870c95c8d28 670 Pfam PF08532 Beta-galactosidase trimerisation domain 398 602 1.9E-77 T 14-10-2018 IPR013738 Beta-galactosidase trimerisation GO:0004565|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 DB29_02747 9078a659ad9b455dc4e5a870c95c8d28 670 Pfam PF02449 Beta-galactosidase 6 388 3.0E-158 T 14-10-2018 IPR013529 Glycoside hydrolase, family 42, N-terminal GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 DB29_01746 3df25816f6c97f06287edf5fd8f34603 316 Pfam PF00150 Cellulase (glycosyl hydrolase family 5) 39 282 1.1E-32 T 14-10-2018 IPR001547 Glycoside hydrolase, family 5 GO:0004553|GO:0005975 DB29_01746 3df25816f6c97f06287edf5fd8f34603 316 SUPERFAMILY SSF51445 30 312 1.78E-71 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily DB29_01746 3df25816f6c97f06287edf5fd8f34603 316 Gene3D G3DSA:3.20.20.80 24 316 1.6E-79 T 14-10-2018 DB29_04296 e8d8c0db8d2e3f9629c77ca87efe90c5 323 SUPERFAMILY SSF48452 76 234 4.93E-16 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DB29_04296 e8d8c0db8d2e3f9629c77ca87efe90c5 323 Gene3D G3DSA:1.25.40.10 39 320 3.2E-18 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DB29_02535 15eb14c7e74a6a0272ee59cf7b3db6be 604 Pfam PF04740 LXG domain of WXG superfamily 2 196 9.6E-50 T 14-10-2018 IPR006829 LXG domain DB29_02117 7810ab67a6dc4a425c951b915a9ff580 326 ProSitePatterns PS00211 ABC transporters family signature. 155 169 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB29_02117 7810ab67a6dc4a425c951b915a9ff580 326 Pfam PF00005 ABC transporter 26 182 2.1E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB29_02117 7810ab67a6dc4a425c951b915a9ff580 326 SUPERFAMILY SSF52540 5 253 3.34E-68 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_02117 7810ab67a6dc4a425c951b915a9ff580 326 Gene3D G3DSA:3.40.50.300 3 326 4.4E-99 T 14-10-2018 DB29_02117 7810ab67a6dc4a425c951b915a9ff580 326 SMART SM00382 34 232 1.0E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_02117 7810ab67a6dc4a425c951b915a9ff580 326 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 234 298 1.0E-16 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DB29_02117 7810ab67a6dc4a425c951b915a9ff580 326 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 232 320 7.2E-28 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DB29_00038 2204b8397acf364228f75f925714dbda 334 Pfam PF00296 Luciferase-like monooxygenase 14 299 2.6E-41 T 14-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 DB29_00038 2204b8397acf364228f75f925714dbda 334 SUPERFAMILY SSF51679 2 327 9.3E-68 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 DB29_00038 2204b8397acf364228f75f925714dbda 334 Gene3D G3DSA:3.20.20.30 1 330 8.3E-90 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 DB29_00038 2204b8397acf364228f75f925714dbda 334 TIGRFAM TIGR03558 oxido_grp_1: luciferase family oxidoreductase, group 1 4 326 7.6E-106 T 14-10-2018 IPR019949 Luciferase family oxidoreductase, group 1 DB29_03237 e3190ca1ad052766e2ec27f9ff783a81 660 SMART SM00487 9 424 2.1E-24 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DB29_03237 e3190ca1ad052766e2ec27f9ff783a81 660 Gene3D G3DSA:3.40.50.300 414 595 2.4E-53 T 14-10-2018 DB29_03237 e3190ca1ad052766e2ec27f9ff783a81 660 Pfam PF12344 Ultra-violet resistance protein B 551 592 1.6E-22 T 14-10-2018 IPR024759 UvrB, YAD/RRR-motif-containing domain DB29_03237 e3190ca1ad052766e2ec27f9ff783a81 660 Gene3D G3DSA:3.40.50.300 271 413 2.7E-54 T 14-10-2018 DB29_03237 e3190ca1ad052766e2ec27f9ff783a81 660 SUPERFAMILY SSF52540 413 595 4.92E-35 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_03237 e3190ca1ad052766e2ec27f9ff783a81 660 Pfam PF02151 UvrB/uvrC motif 627 658 9.7E-9 T 14-10-2018 IPR001943 UVR domain GO:0005515 DB29_03237 e3190ca1ad052766e2ec27f9ff783a81 660 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 4 657 0.0 T 14-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 DB29_03237 e3190ca1ad052766e2ec27f9ff783a81 660 SUPERFAMILY SSF52540 4 414 1.33E-140 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_03237 e3190ca1ad052766e2ec27f9ff783a81 660 Pfam PF00271 Helicase conserved C-terminal domain 440 544 2.4E-19 T 14-10-2018 IPR001650 Helicase, C-terminal DB29_03237 e3190ca1ad052766e2ec27f9ff783a81 660 Pfam PF04851 Type III restriction enzyme, res subunit 15 119 1.4E-11 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 DB29_03237 e3190ca1ad052766e2ec27f9ff783a81 660 SUPERFAMILY SSF46600 618 658 1.11E-9 T 14-10-2018 IPR036876 UVR domain superfamily DB29_03237 e3190ca1ad052766e2ec27f9ff783a81 660 Gene3D G3DSA:4.10.860.10 610 659 1.8E-6 T 14-10-2018 DB29_03237 e3190ca1ad052766e2ec27f9ff783a81 660 SMART SM00490 459 545 1.1E-19 T 14-10-2018 IPR001650 Helicase, C-terminal DB29_03237 e3190ca1ad052766e2ec27f9ff783a81 660 Gene3D G3DSA:3.40.50.300 1 243 3.3E-83 T 14-10-2018 DB29_03237 e3190ca1ad052766e2ec27f9ff783a81 660 Hamap MF_00204 UvrABC system protein B [uvrB]. 3 659 44.719 T 14-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 DB29_04057 8cae157ac154bf463a6062e16fab7642 333 SUPERFAMILY SSF88713 108 314 8.23E-54 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 DB29_04057 8cae157ac154bf463a6062e16fab7642 333 Gene3D G3DSA:3.20.20.370 123 323 1.7E-53 T 14-10-2018 DB29_04057 8cae157ac154bf463a6062e16fab7642 333 Pfam PF01522 Polysaccharide deacetylase 141 247 6.8E-27 T 14-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 DB29_04057 8cae157ac154bf463a6062e16fab7642 333 TIGRFAM TIGR02873 spore_ylxY: probable sporulation protein, polysaccharide deacetylase family 48 314 1.1E-127 T 14-10-2018 IPR014228 Sporulation protein, polysaccharide deacetylase, YlxY DB29_04186 3a331f89675a1ee99c4d5ad992521fa6 222 Gene3D G3DSA:3.40.50.10320 1 216 3.7E-48 T 14-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 DB29_04186 3a331f89675a1ee99c4d5ad992521fa6 222 Pfam PF02585 GlcNAc-PI de-N-acetylase 8 137 3.3E-29 T 14-10-2018 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related Reactome: R-HSA-162710 DB29_04186 3a331f89675a1ee99c4d5ad992521fa6 222 TIGRFAM TIGR04000 thiol_BshB2: bacillithiol biosynthesis deacetylase BshB2 5 221 2.7E-108 T 14-10-2018 IPR023841 Bacillithiol biosynthesis deacetylase BshB2 DB29_04186 3a331f89675a1ee99c4d5ad992521fa6 222 SUPERFAMILY SSF102588 5 205 5.62E-50 T 14-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 DB29_03492 b1437407102bb48032a60c2dea565f94 414 Gene3D G3DSA:3.10.290.10 342 413 2.0E-21 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 DB29_03492 b1437407102bb48032a60c2dea565f94 414 Pfam PF00579 tRNA synthetases class I (W and Y) 47 333 9.8E-79 T 14-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 DB29_03492 b1437407102bb48032a60c2dea565f94 414 SUPERFAMILY SSF55174 314 411 7.98E-21 T 14-10-2018 DB29_03492 b1437407102bb48032a60c2dea565f94 414 Hamap MF_02007 Tyrosine--tRNA ligase [tyrS]. 13 413 47.469 T 14-10-2018 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 GO:0004831 KEGG: 00970+6.1.1.1 DB29_03492 b1437407102bb48032a60c2dea565f94 414 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 18 412 1.4E-129 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 DB29_03492 b1437407102bb48032a60c2dea565f94 414 Gene3D G3DSA:3.40.50.620 15 232 5.2E-74 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DB29_03492 b1437407102bb48032a60c2dea565f94 414 SUPERFAMILY SSF52374 16 332 2.04E-94 T 14-10-2018 DB29_03492 b1437407102bb48032a60c2dea565f94 414 Gene3D G3DSA:1.10.240.10 233 341 5.9E-37 T 14-10-2018 DB29_03492 b1437407102bb48032a60c2dea565f94 414 SMART SM00363 352 414 3.5E-7 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB29_03492 b1437407102bb48032a60c2dea565f94 414 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 57 67 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 DB29_03492 b1437407102bb48032a60c2dea565f94 414 Pfam PF01479 S4 domain 353 397 4.5E-9 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB29_03492 b1437407102bb48032a60c2dea565f94 414 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 193 215 1.4E-25 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 DB29_03492 b1437407102bb48032a60c2dea565f94 414 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 176 191 1.4E-25 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 DB29_03492 b1437407102bb48032a60c2dea565f94 414 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 226 238 1.4E-25 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 DB29_03492 b1437407102bb48032a60c2dea565f94 414 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 61 83 1.4E-25 T 14-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 DB29_03206 281f72c5dd296a497d57c0c3c1ba0583 211 SUPERFAMILY SSF54211 2 131 9.48E-44 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DB29_03206 281f72c5dd296a497d57c0c3c1ba0583 211 TIGRFAM TIGR00257 IMPACT_YIGZ: uncharacterized protein, YigZ family 1 202 7.4E-75 T 14-10-2018 IPR015796 Impact family, bacterial/archaeal DB29_03206 281f72c5dd296a497d57c0c3c1ba0583 211 ProSitePatterns PS00910 Uncharacterized protein family UPF0029 signature. 79 108 - T 14-10-2018 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site DB29_03206 281f72c5dd296a497d57c0c3c1ba0583 211 Pfam PF09186 Domain of unknown function (DUF1949) 141 195 6.6E-18 T 14-10-2018 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal DB29_03206 281f72c5dd296a497d57c0c3c1ba0583 211 Pfam PF01205 Uncharacterized protein family UPF0029 19 123 4.9E-32 T 14-10-2018 IPR001498 Impact, N-terminal DB29_03206 281f72c5dd296a497d57c0c3c1ba0583 211 Gene3D G3DSA:3.30.230.30 1 133 4.0E-50 T 14-10-2018 IPR036956 Impact, N-terminal domain superfamily DB29_03206 281f72c5dd296a497d57c0c3c1ba0583 211 SUPERFAMILY SSF54980 135 199 1.37E-11 T 14-10-2018 IPR035647 EF-G domain III/V-like DB29_02090 92c7cad2db2cb61b2901a1d7a4500fc3 159 Pfam PF02590 Predicted SPOUT methyltransferase 2 158 2.4E-56 T 14-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 DB29_02090 92c7cad2db2cb61b2901a1d7a4500fc3 159 Gene3D G3DSA:3.40.1280.10 1 159 1.3E-63 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal DB29_02090 92c7cad2db2cb61b2901a1d7a4500fc3 159 PIRSF PIRSF004505 1 159 1.8E-51 T 14-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 DB29_02090 92c7cad2db2cb61b2901a1d7a4500fc3 159 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 159 29.338 T 14-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 DB29_02090 92c7cad2db2cb61b2901a1d7a4500fc3 159 TIGRFAM TIGR00246 tRNA_RlmH_YbeA: rRNA large subunit m3Psi methyltransferase RlmH 1 159 4.2E-65 T 14-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 DB29_02090 92c7cad2db2cb61b2901a1d7a4500fc3 159 SUPERFAMILY SSF75217 2 157 2.29E-59 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases DB29_02982 c33f93c66b35e7092a9976894f9b4beb 297 Pfam PF10026 Predicted Zn-dependent protease (DUF2268) 90 290 2.7E-52 T 14-10-2018 IPR018728 Domain of unknown function DUF2268 DB29_01721 d75143970a08c32f5f4783d31a6db781 536 Pfam PF00501 AMP-binding enzyme 13 435 7.8E-91 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 DB29_01721 d75143970a08c32f5f4783d31a6db781 536 Gene3D G3DSA:3.30.300.310 431 533 6.4E-35 T 14-10-2018 DB29_01721 d75143970a08c32f5f4783d31a6db781 536 Gene3D G3DSA:3.40.50.12780 1 430 3.4E-127 T 14-10-2018 DB29_01721 d75143970a08c32f5f4783d31a6db781 536 SUPERFAMILY SSF56801 4 532 4.58E-140 T 14-10-2018 DB29_01721 d75143970a08c32f5f4783d31a6db781 536 Pfam PF13193 AMP-binding enzyme C-terminal domain 445 519 6.4E-21 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain DB29_01656 496c4cc89b7f539908e4248280d5ee6c 503 SMART SM00813 294 494 1.1E-93 T 14-10-2018 IPR010720 Alpha-L-arabinofuranosidase, C-terminal GO:0046373|GO:0046556 KEGG: 00520+3.2.1.55 DB29_01656 496c4cc89b7f539908e4248280d5ee6c 503 SUPERFAMILY SSF51011 372 501 3.6E-46 T 14-10-2018 DB29_01656 496c4cc89b7f539908e4248280d5ee6c 503 Gene3D G3DSA:3.20.20.80 21 384 9.8E-227 T 14-10-2018 DB29_01656 496c4cc89b7f539908e4248280d5ee6c 503 Pfam PF06964 Alpha-L-arabinofuranosidase C-terminal domain 294 494 1.6E-40 T 14-10-2018 IPR010720 Alpha-L-arabinofuranosidase, C-terminal GO:0046373|GO:0046556 KEGG: 00520+3.2.1.55 DB29_01656 496c4cc89b7f539908e4248280d5ee6c 503 Gene3D G3DSA:2.60.40.1180 9 499 9.8E-227 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta DB29_01656 496c4cc89b7f539908e4248280d5ee6c 503 SUPERFAMILY SSF51445 20 382 4.45E-113 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily DB29_00542 9a778754316e146d75098d51800a13b7 473 Pfam PF00474 Sodium:solute symporter family 37 423 1.4E-28 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 DB29_00542 9a778754316e146d75098d51800a13b7 473 Gene3D G3DSA:1.20.1730.10 22 473 6.3E-62 T 14-10-2018 IPR038377 Sodium/glucose symporter superfamily DB29_01032 9fa7ebb32a1629b58e380b0204f9c5cb 415 Gene3D G3DSA:1.20.1250.20 2 392 3.0E-45 T 14-10-2018 DB29_01032 9fa7ebb32a1629b58e380b0204f9c5cb 415 Pfam PF07690 Major Facilitator Superfamily 22 352 1.7E-26 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DB29_01032 9fa7ebb32a1629b58e380b0204f9c5cb 415 PRINTS PR01988 Putative bacilysin exporter bacE signature 163 180 9.8E-6 T 14-10-2018 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 DB29_01032 9fa7ebb32a1629b58e380b0204f9c5cb 415 PRINTS PR01988 Putative bacilysin exporter bacE signature 12 34 9.8E-6 T 14-10-2018 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 DB29_01032 9fa7ebb32a1629b58e380b0204f9c5cb 415 PRINTS PR01988 Putative bacilysin exporter bacE signature 136 157 9.8E-6 T 14-10-2018 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 DB29_01032 9fa7ebb32a1629b58e380b0204f9c5cb 415 PRINTS PR01988 Putative bacilysin exporter bacE signature 255 272 9.8E-6 T 14-10-2018 IPR022324 Bacilysin exporter BacE, putative GO:0016020|GO:0042891 DB29_01032 9fa7ebb32a1629b58e380b0204f9c5cb 415 SUPERFAMILY SSF103473 1 400 2.22E-54 T 14-10-2018 IPR036259 MFS transporter superfamily DB29_03060 ff425a2f9fe825ac55d7d61ef25fc9fb 392 TIGRFAM TIGR00131 gal_kin: galactokinase 5 384 5.4E-114 T 14-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 DB29_03060 ff425a2f9fe825ac55d7d61ef25fc9fb 392 PRINTS PR00473 Galactokinase signature 267 281 2.3E-28 T 14-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 DB29_03060 ff425a2f9fe825ac55d7d61ef25fc9fb 392 PRINTS PR00473 Galactokinase signature 26 44 2.3E-28 T 14-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 DB29_03060 ff425a2f9fe825ac55d7d61ef25fc9fb 392 PRINTS PR00473 Galactokinase signature 89 100 2.3E-28 T 14-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 DB29_03060 ff425a2f9fe825ac55d7d61ef25fc9fb 392 PRINTS PR00473 Galactokinase signature 109 127 2.3E-28 T 14-10-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 DB29_03060 ff425a2f9fe825ac55d7d61ef25fc9fb 392 Pfam PF08544 GHMP kinases C terminal 283 358 8.2E-10 T 14-10-2018 IPR013750 GHMP kinase, C-terminal domain DB29_03060 ff425a2f9fe825ac55d7d61ef25fc9fb 392 SUPERFAMILY SSF54211 4 199 2.13E-61 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DB29_03060 ff425a2f9fe825ac55d7d61ef25fc9fb 392 Gene3D G3DSA:3.30.70.890 199 360 9.2E-132 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily DB29_03060 ff425a2f9fe825ac55d7d61ef25fc9fb 392 Pfam PF10509 Galactokinase galactose-binding signature 9 56 9.3E-23 T 14-10-2018 IPR019539 Galactokinase galactose-binding domain GO:0005534 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 DB29_03060 ff425a2f9fe825ac55d7d61ef25fc9fb 392 SUPERFAMILY SSF55060 202 383 6.08E-53 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily DB29_03060 ff425a2f9fe825ac55d7d61ef25fc9fb 392 Hamap MF_00246 Galactokinase [galK]. 24 384 43.01 T 14-10-2018 IPR022963 Galactokinase, bacterial GO:0004335|GO:0006012 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 DB29_03060 ff425a2f9fe825ac55d7d61ef25fc9fb 392 Pfam PF00288 GHMP kinases N terminal domain 112 178 1.1E-11 T 14-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 DB29_03060 ff425a2f9fe825ac55d7d61ef25fc9fb 392 PIRSF PIRSF000530 1 386 9.6E-125 T 14-10-2018 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 DB29_03060 ff425a2f9fe825ac55d7d61ef25fc9fb 392 PRINTS PR00959 Mevalonate kinase family signature 159 178 1.3E-42 T 14-10-2018 DB29_03060 ff425a2f9fe825ac55d7d61ef25fc9fb 392 PRINTS PR00959 Mevalonate kinase family signature 331 348 1.3E-42 T 14-10-2018 DB29_03060 ff425a2f9fe825ac55d7d61ef25fc9fb 392 PRINTS PR00959 Mevalonate kinase family signature 116 138 1.3E-42 T 14-10-2018 DB29_03060 ff425a2f9fe825ac55d7d61ef25fc9fb 392 PRINTS PR00959 Mevalonate kinase family signature 24 48 1.3E-42 T 14-10-2018 DB29_03060 ff425a2f9fe825ac55d7d61ef25fc9fb 392 Gene3D G3DSA:3.30.230.10 21 198 9.2E-132 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DB29_03060 ff425a2f9fe825ac55d7d61ef25fc9fb 392 ProSitePatterns PS00106 Galactokinase signature. 26 37 - T 14-10-2018 IPR019741 Galactokinase, conserved site KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 DB29_03060 ff425a2f9fe825ac55d7d61ef25fc9fb 392 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 118 129 - T 14-10-2018 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 DB29_01679 9564c5ef9f13849c0a4e7e4f94f3071a 894 ProDom PD042532 ISOMERASE L-RHAMNOSE METAL-BINDING METABOLISM RHAMNOSE MANGANESE ENZYME KINASE 3D-STRUCTURE RHAA/RHAB 476 866 0.0 T 14-10-2018 DB29_01679 9564c5ef9f13849c0a4e7e4f94f3071a 894 Gene3D G3DSA:3.30.420.40 238 465 1.2E-83 T 14-10-2018 DB29_01679 9564c5ef9f13849c0a4e7e4f94f3071a 894 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 4 242 7.5E-41 T 14-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 DB29_01679 9564c5ef9f13849c0a4e7e4f94f3071a 894 Gene3D G3DSA:3.20.20.150 466 887 9.3E-183 T 14-10-2018 DB29_01679 9564c5ef9f13849c0a4e7e4f94f3071a 894 Gene3D G3DSA:3.30.420.40 3 237 2.5E-86 T 14-10-2018 DB29_01679 9564c5ef9f13849c0a4e7e4f94f3071a 894 SUPERFAMILY SSF53067 251 471 7.2E-27 T 14-10-2018 DB29_01679 9564c5ef9f13849c0a4e7e4f94f3071a 894 TIGRFAM TIGR02627 rhamnulo_kin: rhamnulokinase 6 459 9.8E-178 T 14-10-2018 IPR013449 Rhamnulokinase GO:0008993|GO:0019301 KEGG: 00040+2.7.1.5|KEGG: 00051+2.7.1.5 DB29_01679 9564c5ef9f13849c0a4e7e4f94f3071a 894 SUPERFAMILY SSF51658 473 885 1.07E-79 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily DB29_01679 9564c5ef9f13849c0a4e7e4f94f3071a 894 Pfam PF06134 L-rhamnose isomerase (RhaA) 472 886 6.3E-222 T 14-10-2018 IPR009308 Rhamnose isomerase GO:0008740|GO:0019299|GO:0030145 KEGG: 00051+5.3.1.14 DB29_01679 9564c5ef9f13849c0a4e7e4f94f3071a 894 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 254 440 2.4E-17 T 14-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 DB29_01679 9564c5ef9f13849c0a4e7e4f94f3071a 894 TIGRFAM TIGR01748 rhaA: L-rhamnose isomerase 473 886 3.1E-212 T 14-10-2018 IPR009308 Rhamnose isomerase GO:0008740|GO:0019299|GO:0030145 KEGG: 00051+5.3.1.14 DB29_01679 9564c5ef9f13849c0a4e7e4f94f3071a 894 SUPERFAMILY SSF53067 4 245 2.07E-51 T 14-10-2018 DB29_01679 9564c5ef9f13849c0a4e7e4f94f3071a 894 Hamap MF_00541 L-rhamnose isomerase [rhaA]. 462 894 239.876 T 14-10-2018 IPR009308 Rhamnose isomerase GO:0008740|GO:0019299|GO:0030145 KEGG: 00051+5.3.1.14 DB29_03276 c092a7573874c39d9d270a2ea3129665 338 Gene3D G3DSA:1.10.10.10 17 90 7.2E-15 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_03276 c092a7573874c39d9d270a2ea3129665 338 SUPERFAMILY SSF46785 20 84 1.33E-11 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_03276 c092a7573874c39d9d270a2ea3129665 338 Gene3D G3DSA:3.40.50.1360 91 338 7.2E-75 T 14-10-2018 DB29_03276 c092a7573874c39d9d270a2ea3129665 338 Pfam PF04198 Putative sugar-binding domain 93 337 2.2E-67 T 14-10-2018 IPR007324 Sugar-binding domain, putative GO:0030246 DB29_03276 c092a7573874c39d9d270a2ea3129665 338 SUPERFAMILY SSF100950 96 336 1.59E-63 T 14-10-2018 IPR037171 NagB/RpiA transferase-like DB29_04309 7723aa4b37fc478dc2a01ed4de975db4 207 TIGRFAM TIGR00648 recU: recombination protein U 31 195 9.8E-70 T 14-10-2018 IPR004612 Holliday junction resolvase RecU GO:0005737|GO:0006281|GO:0006310 DB29_04309 7723aa4b37fc478dc2a01ed4de975db4 207 SUPERFAMILY SSF52980 34 198 8.31E-63 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 DB29_04309 7723aa4b37fc478dc2a01ed4de975db4 207 Hamap MF_00130 Holliday junction resolvase RecU [recU]. 1 207 95.023 T 14-10-2018 IPR004612 Holliday junction resolvase RecU GO:0005737|GO:0006281|GO:0006310 DB29_04309 7723aa4b37fc478dc2a01ed4de975db4 207 Gene3D G3DSA:3.40.1350.10 33 201 7.5E-65 T 14-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 DB29_04309 7723aa4b37fc478dc2a01ed4de975db4 207 PIRSF PIRSF037785 25 205 1.3E-77 T 14-10-2018 IPR004612 Holliday junction resolvase RecU GO:0005737|GO:0006281|GO:0006310 DB29_04309 7723aa4b37fc478dc2a01ed4de975db4 207 Pfam PF03838 Recombination protein U 32 195 1.0E-64 T 14-10-2018 IPR004612 Holliday junction resolvase RecU GO:0005737|GO:0006281|GO:0006310 DB29_03417 84c114e95a3b1d6ba2dd9d299106e1c6 209 Gene3D G3DSA:3.40.50.300 7 209 4.5E-56 T 14-10-2018 DB29_03417 84c114e95a3b1d6ba2dd9d299106e1c6 209 Pfam PF01712 Deoxynucleoside kinase 10 206 1.0E-64 T 14-10-2018 IPR031314 Deoxynucleoside kinase domain DB29_03417 84c114e95a3b1d6ba2dd9d299106e1c6 209 PIRSF PIRSF000705 2 209 4.3E-62 T 14-10-2018 IPR002624 Deoxynucleoside kinase GO:0005524|GO:0006139|GO:0019206 DB29_03417 84c114e95a3b1d6ba2dd9d299106e1c6 209 SUPERFAMILY SSF52540 6 205 1.11E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_04145 26c204ebde43ed46f5a8a5c83fc072e5 291 Gene3D G3DSA:3.40.50.2300 152 289 5.2E-27 T 14-10-2018 DB29_04145 26c204ebde43ed46f5a8a5c83fc072e5 291 SMART SM00260 12 146 6.3E-18 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 DB29_04145 26c204ebde43ed46f5a8a5c83fc072e5 291 Gene3D G3DSA:2.30.30.40 18 140 1.1E-23 T 14-10-2018 DB29_04145 26c204ebde43ed46f5a8a5c83fc072e5 291 SMART SM00448 167 283 4.8E-21 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DB29_04145 26c204ebde43ed46f5a8a5c83fc072e5 291 SUPERFAMILY SSF50341 15 150 8.37E-28 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 DB29_04145 26c204ebde43ed46f5a8a5c83fc072e5 291 PIRSF PIRSF002867 2 291 4.4E-79 T 14-10-2018 IPR024181 Chemotaxis response regulator CheV DB29_04145 26c204ebde43ed46f5a8a5c83fc072e5 291 SUPERFAMILY SSF52172 166 287 1.42E-25 T 14-10-2018 IPR011006 CheY-like superfamily DB29_04145 26c204ebde43ed46f5a8a5c83fc072e5 291 Pfam PF01584 CheW-like domain 16 147 8.2E-28 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 DB29_04145 26c204ebde43ed46f5a8a5c83fc072e5 291 Gene3D G3DSA:2.40.50.180 33 146 1.1E-23 T 14-10-2018 DB29_04145 26c204ebde43ed46f5a8a5c83fc072e5 291 Pfam PF00072 Response regulator receiver domain 170 283 3.1E-21 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DB29_03934 cf5c59cebb174c1000becc0b6cf05aae 302 Gene3D G3DSA:3.30.2350.10 79 302 3.8E-76 T 14-10-2018 DB29_03934 cf5c59cebb174c1000becc0b6cf05aae 302 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 9 298 4.5E-102 T 14-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 DB29_03934 cf5c59cebb174c1000becc0b6cf05aae 302 SUPERFAMILY SSF55120 73 295 7.2E-76 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 DB29_03934 cf5c59cebb174c1000becc0b6cf05aae 302 Gene3D G3DSA:3.10.290.10 2 68 6.2E-17 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 DB29_03934 cf5c59cebb174c1000becc0b6cf05aae 302 Pfam PF01479 S4 domain 13 59 7.1E-11 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB29_03934 cf5c59cebb174c1000becc0b6cf05aae 302 SMART SM00363 13 77 1.6E-13 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB29_03934 cf5c59cebb174c1000becc0b6cf05aae 302 Pfam PF00849 RNA pseudouridylate synthase 86 240 5.9E-33 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 DB29_03934 cf5c59cebb174c1000becc0b6cf05aae 302 SUPERFAMILY SSF55174 10 99 2.86E-13 T 14-10-2018 DB29_03934 cf5c59cebb174c1000becc0b6cf05aae 302 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 132 146 - T 14-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 DB29_01413 f864ef3f5697a9ce4139bd082fe85b12 476 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 6 217 1.2E-40 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 DB29_01413 f864ef3f5697a9ce4139bd082fe85b12 476 Gene3D G3DSA:3.40.1010.10 3 120 1.6E-39 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 DB29_01413 f864ef3f5697a9ce4139bd082fe85b12 476 Gene3D G3DSA:3.30.950.10 121 256 2.7E-40 T 14-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 DB29_01413 f864ef3f5697a9ce4139bd082fe85b12 476 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 5 241 4.4E-85 T 14-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 DB29_01413 f864ef3f5697a9ce4139bd082fe85b12 476 PIRSF PIRSF036426 1 255 8.5E-90 T 14-10-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 DB29_01413 f864ef3f5697a9ce4139bd082fe85b12 476 SUPERFAMILY SSF53790 4 255 7.59E-71 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 DB29_01413 f864ef3f5697a9ce4139bd082fe85b12 476 SUPERFAMILY SSF69618 260 453 4.05E-9 T 14-10-2018 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 DB29_01413 f864ef3f5697a9ce4139bd082fe85b12 476 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 85 118 - T 14-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 DB29_00751 125869209a55e88c676f72d49041a54b 328 SUPERFAMILY SSF53822 40 298 1.7E-12 T 14-10-2018 IPR028082 Periplasmic binding protein-like I DB29_00751 125869209a55e88c676f72d49041a54b 328 Pfam PF04392 ABC transporter substrate binding protein 36 325 5.9E-74 T 14-10-2018 IPR007487 ABC transporter, substrate-binding protein DB29_00751 125869209a55e88c676f72d49041a54b 328 Gene3D G3DSA:3.40.50.2300 155 286 1.9E-35 T 14-10-2018 DB29_00751 125869209a55e88c676f72d49041a54b 328 Gene3D G3DSA:3.40.50.2300 29 154 5.3E-40 T 14-10-2018 DB29_04237 349dffe565c5b93b3a8943949309b14b 1045 Gene3D G3DSA:1.20.5.1230 723 913 1.5E-10 T 14-10-2018 DB29_04237 349dffe565c5b93b3a8943949309b14b 1045 SUPERFAMILY SSF48371 325 859 1.12E-9 T 14-10-2018 IPR016024 Armadillo-type fold DB29_03267 a0931d77bcb6f1fba5b360485a4937fd 213 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 35 203 4.8E-22 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DB29_03267 a0931d77bcb6f1fba5b360485a4937fd 213 Gene3D G3DSA:1.10.3720.10 12 203 6.1E-29 T 14-10-2018 IPR035906 MetI-like superfamily DB29_03267 a0931d77bcb6f1fba5b360485a4937fd 213 SUPERFAMILY SSF161098 12 194 5.36E-39 T 14-10-2018 IPR035906 MetI-like superfamily DB29_01645 85476e5dab0ad93db28de226149ced69 486 SUPERFAMILY SSF50443 320 486 7.32E-67 T 14-10-2018 IPR004216 L-fucose/L-arabinose isomerase, C-terminal DB29_01645 85476e5dab0ad93db28de226149ced69 486 Pfam PF02610 L-arabinose isomerase 6 349 1.6E-169 T 14-10-2018 IPR003762 L-arabinose isomerase GO:0008733 KEGG: 00040+5.3.1.4 DB29_01645 85476e5dab0ad93db28de226149ced69 486 Pfam PF11762 L-arabinose isomerase C-terminal domain 353 466 2.2E-48 T 14-10-2018 IPR024664 L-arabinose isomerase, C-terminal KEGG: 00040+5.3.1.4 DB29_01645 85476e5dab0ad93db28de226149ced69 486 SUPERFAMILY SSF53743 1 318 2.46E-119 T 14-10-2018 IPR009015 L-fucose isomerase, N-terminal/central domain superfamily GO:0005737|GO:0005996|GO:0016861 DB29_01645 85476e5dab0ad93db28de226149ced69 486 Hamap MF_00519 L-arabinose isomerase [araA]. 1 467 63.445 T 14-10-2018 IPR003762 L-arabinose isomerase GO:0008733 KEGG: 00040+5.3.1.4 DB29_01645 85476e5dab0ad93db28de226149ced69 486 PIRSF PIRSF001478 1 486 4.8E-234 T 14-10-2018 IPR003762 L-arabinose isomerase GO:0008733 KEGG: 00040+5.3.1.4 DB29_01645 85476e5dab0ad93db28de226149ced69 486 ProDom PD018364 ISOMERASE L-ARABINOSE ARABINOSE METABOLISM CARBOHYDRATE CATABOLISM ARAA 8 296 5.0E-160 T 14-10-2018 IPR003762 L-arabinose isomerase GO:0008733 KEGG: 00040+5.3.1.4 DB29_01645 85476e5dab0ad93db28de226149ced69 486 Gene3D G3DSA:3.40.50.10940 1 173 1.3E-79 T 14-10-2018 IPR038583 L-arabinose isomerase, N-terminal domain superfamily KEGG: 00040+5.3.1.4 DB29_00365 0e71b7a2c804a40f6f155a5fa1f044c4 117 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 1 103 24.766 T 14-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS DB29_00365 0e71b7a2c804a40f6f155a5fa1f044c4 117 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 5 102 8.1E-36 T 14-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS DB29_00365 0e71b7a2c804a40f6f155a5fa1f044c4 117 Pfam PF02410 Ribosomal silencing factor during starvation 8 102 1.5E-26 T 14-10-2018 DB29_00365 0e71b7a2c804a40f6f155a5fa1f044c4 117 SUPERFAMILY SSF81301 3 113 1.19E-39 T 14-10-2018 DB29_00365 0e71b7a2c804a40f6f155a5fa1f044c4 117 Gene3D G3DSA:3.30.460.10 1 106 3.5E-38 T 14-10-2018 DB29_02377 f6c0c47424929c608ad4762762107e42 305 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 81 222 3.9E-48 T 14-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain DB29_02377 f6c0c47424929c608ad4762762107e42 305 TIGRFAM TIGR00350 lytR_cpsA_psr: cell envelope-related function transcriptional attenuator common domain 80 222 2.5E-46 T 14-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain DB29_02377 f6c0c47424929c608ad4762762107e42 305 Gene3D G3DSA:1.10.260.150 47 305 2.2E-81 T 14-10-2018 DB29_03171 7abcc183f6f92736704419e94418b858 363 SMART SM00382 34 217 1.7E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_03171 7abcc183f6f92736704419e94418b858 363 SUPERFAMILY SSF50331 242 362 1.09E-29 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal DB29_03171 7abcc183f6f92736704419e94418b858 363 Pfam PF08402 TOBE domain 286 354 9.7E-12 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 DB29_03171 7abcc183f6f92736704419e94418b858 363 Gene3D G3DSA:2.40.50.100 245 359 3.3E-27 T 14-10-2018 DB29_03171 7abcc183f6f92736704419e94418b858 363 SUPERFAMILY SSF52540 4 248 3.22E-82 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_03171 7abcc183f6f92736704419e94418b858 363 Gene3D G3DSA:3.40.50.300 1 244 7.4E-71 T 14-10-2018 DB29_03171 7abcc183f6f92736704419e94418b858 363 Gene3D G3DSA:2.40.50.140 301 346 3.3E-27 T 14-10-2018 DB29_03171 7abcc183f6f92736704419e94418b858 363 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB29_03171 7abcc183f6f92736704419e94418b858 363 Pfam PF00005 ABC transporter 26 167 1.3E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB29_00433 13fe3706a33d266fedbbf96b88c512cb 389 Gene3D G3DSA:1.10.260.50 18 281 4.1E-138 T 14-10-2018 DB29_00433 13fe3706a33d266fedbbf96b88c512cb 389 Pfam PF00266 Aminotransferase class-V 7 367 2.4E-81 T 14-10-2018 IPR000192 Aminotransferase class V domain DB29_00433 13fe3706a33d266fedbbf96b88c512cb 389 Gene3D G3DSA:3.90.1150.10 7 374 4.1E-138 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DB29_00433 13fe3706a33d266fedbbf96b88c512cb 389 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 196 215 - T 14-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site DB29_00433 13fe3706a33d266fedbbf96b88c512cb 389 Gene3D G3DSA:3.40.640.10 64 238 4.1E-138 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DB29_00433 13fe3706a33d266fedbbf96b88c512cb 389 PIRSF PIRSF005572 4 385 4.1E-120 T 14-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 DB29_00433 13fe3706a33d266fedbbf96b88c512cb 389 SUPERFAMILY SSF53383 6 377 3.48E-104 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DB29_03832 b893926740d90fe4dd33b0f3bb7517b4 193 Pfam PF04234 CopC domain 26 118 2.2E-18 T 14-10-2018 IPR007348 CopC domain GO:0005507|GO:0042597|GO:0046688 DB29_03832 b893926740d90fe4dd33b0f3bb7517b4 193 Gene3D G3DSA:2.60.40.1220 26 125 3.5E-18 T 14-10-2018 DB29_03832 b893926740d90fe4dd33b0f3bb7517b4 193 SUPERFAMILY SSF81296 25 119 2.24E-18 T 14-10-2018 IPR014756 Immunoglobulin E-set DB29_02386 b310229936dc7d5e2b02b36f66342161 233 Pfam PF13807 G-rich domain on putative tyrosine kinase 141 193 1.1E-7 T 14-10-2018 IPR032807 Tyrosine kinase, G-rich domain DB29_02386 b310229936dc7d5e2b02b36f66342161 233 Pfam PF02706 Chain length determinant protein 3 91 2.2E-17 T 14-10-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 DB29_02353 ec7afb1d0b27e632479f13e6ea2ab601 432 Gene3D G3DSA:3.65.10.10 20 231 2.6E-168 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 DB29_02353 ec7afb1d0b27e632479f13e6ea2ab601 432 SUPERFAMILY SSF55205 2 418 1.32E-139 T 14-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 DB29_02353 ec7afb1d0b27e632479f13e6ea2ab601 432 Gene3D G3DSA:3.65.10.10 6 415 2.6E-168 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 DB29_02353 ec7afb1d0b27e632479f13e6ea2ab601 432 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 417 44.436 T 14-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DB29_02353 ec7afb1d0b27e632479f13e6ea2ab601 432 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2 416 6.0E-174 T 14-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DB29_02353 ec7afb1d0b27e632479f13e6ea2ab601 432 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 407 1.2E-108 T 14-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 DB29_01085 a1321197aad7f8f4c10ccf99e1c81005 226 Gene3D G3DSA:1.10.3720.10 4 213 9.2E-46 T 14-10-2018 IPR035906 MetI-like superfamily DB29_01085 a1321197aad7f8f4c10ccf99e1c81005 226 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 14 106 1.0E-17 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 DB29_01085 a1321197aad7f8f4c10ccf99e1c81005 226 SUPERFAMILY SSF161098 15 197 5.1E-37 T 14-10-2018 IPR035906 MetI-like superfamily DB29_01085 a1321197aad7f8f4c10ccf99e1c81005 226 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 37 211 3.5E-24 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DB29_01085 a1321197aad7f8f4c10ccf99e1c81005 226 TIGRFAM TIGR03003 ectoine_ehuD: ectoine/hydroxyectoine ABC transporter, permease protein EhuD 5 210 5.5E-79 T 14-10-2018 IPR014341 Ectoine/hydroxyectoine ABC transporter, permease protein EhuD DB29_02068 30a86f7cff0d184a7ea732b6caffd2f2 283 Pfam PF02195 ParB-like nuclease domain 29 115 2.9E-25 T 14-10-2018 IPR003115 ParB/Sulfiredoxin DB29_02068 30a86f7cff0d184a7ea732b6caffd2f2 283 Gene3D G3DSA:3.90.1530.30 40 102 9.8E-26 T 14-10-2018 DB29_02068 30a86f7cff0d184a7ea732b6caffd2f2 283 SUPERFAMILY SSF109709 110 217 6.8E-34 T 14-10-2018 DB29_02068 30a86f7cff0d184a7ea732b6caffd2f2 283 TIGRFAM TIGR04285 nucleoid_noc: nucleoid occlusion protein 25 281 8.7E-115 T 14-10-2018 IPR023705 Nucleoid occlusion protein DB29_02068 30a86f7cff0d184a7ea732b6caffd2f2 283 SMART SM00470 27 116 2.4E-31 T 14-10-2018 IPR003115 ParB/Sulfiredoxin DB29_02068 30a86f7cff0d184a7ea732b6caffd2f2 283 Gene3D G3DSA:1.10.10.2830 103 216 2.1E-35 T 14-10-2018 DB29_02068 30a86f7cff0d184a7ea732b6caffd2f2 283 Hamap MF_02015 Nucleoid occlusion protein [noc]. 3 281 36.516 T 14-10-2018 IPR023705 Nucleoid occlusion protein DB29_02068 30a86f7cff0d184a7ea732b6caffd2f2 283 SUPERFAMILY SSF110849 27 118 1.94E-28 T 14-10-2018 IPR036086 ParB/Sulfiredoxin superfamily DB29_02068 30a86f7cff0d184a7ea732b6caffd2f2 283 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 24 202 5.9E-60 T 14-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 DB29_01930 c67a29cd8a0bdc8b0a5f4ae893146016 818 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 211 323 9.4E-14 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 DB29_01930 c67a29cd8a0bdc8b0a5f4ae893146016 818 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 547 565 3.3E-41 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 DB29_01930 c67a29cd8a0bdc8b0a5f4ae893146016 818 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 592 610 3.3E-41 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 DB29_01930 c67a29cd8a0bdc8b0a5f4ae893146016 818 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 654 668 3.3E-41 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 DB29_01930 c67a29cd8a0bdc8b0a5f4ae893146016 818 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 621 639 3.3E-41 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 DB29_01930 c67a29cd8a0bdc8b0a5f4ae893146016 818 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 720 799 2.5E-25 T 14-10-2018 IPR019489 Clp ATPase, C-terminal DB29_01930 c67a29cd8a0bdc8b0a5f4ae893146016 818 Gene3D G3DSA:1.10.8.60 720 816 3.7E-27 T 14-10-2018 DB29_01930 c67a29cd8a0bdc8b0a5f4ae893146016 818 SUPERFAMILY SSF52540 167 472 5.98E-77 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_01930 c67a29cd8a0bdc8b0a5f4ae893146016 818 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 301 313 - T 14-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 DB29_01930 c67a29cd8a0bdc8b0a5f4ae893146016 818 SUPERFAMILY SSF81923 5 153 9.61E-32 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 DB29_01930 c67a29cd8a0bdc8b0a5f4ae893146016 818 SUPERFAMILY SSF52540 492 807 3.21E-83 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_01930 c67a29cd8a0bdc8b0a5f4ae893146016 818 SMART SM00382 543 687 3.8E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_01930 c67a29cd8a0bdc8b0a5f4ae893146016 818 SMART SM00382 206 351 3.1E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_01930 c67a29cd8a0bdc8b0a5f4ae893146016 818 Gene3D G3DSA:1.10.8.60 352 487 5.7E-51 T 14-10-2018 DB29_01930 c67a29cd8a0bdc8b0a5f4ae893146016 818 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 69 9.4E-15 T 14-10-2018 IPR004176 Clp, N-terminal DB29_01930 c67a29cd8a0bdc8b0a5f4ae893146016 818 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 97 147 2.0E-18 T 14-10-2018 IPR004176 Clp, N-terminal DB29_01930 c67a29cd8a0bdc8b0a5f4ae893146016 818 SMART SM01086 720 809 1.5E-34 T 14-10-2018 IPR019489 Clp ATPase, C-terminal DB29_01930 c67a29cd8a0bdc8b0a5f4ae893146016 818 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 577 595 - T 14-10-2018 IPR028299 ClpA/B, conserved site 2 DB29_01930 c67a29cd8a0bdc8b0a5f4ae893146016 818 Gene3D G3DSA:4.10.860.10 415 473 5.7E-51 T 14-10-2018 DB29_01930 c67a29cd8a0bdc8b0a5f4ae893146016 818 Pfam PF07724 AAA domain (Cdc48 subfamily) 542 714 1.2E-55 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 DB29_01930 c67a29cd8a0bdc8b0a5f4ae893146016 818 Gene3D G3DSA:3.40.50.300 496 718 1.9E-90 T 14-10-2018 DB29_01930 c67a29cd8a0bdc8b0a5f4ae893146016 818 Pfam PF02151 UvrB/uvrC motif 424 457 1.6E-5 T 14-10-2018 IPR001943 UVR domain GO:0005515 DB29_01930 c67a29cd8a0bdc8b0a5f4ae893146016 818 Gene3D G3DSA:3.40.50.300 156 349 1.4E-72 T 14-10-2018 DB29_01930 c67a29cd8a0bdc8b0a5f4ae893146016 818 Gene3D G3DSA:1.10.1780.10 1 154 2.8E-58 T 14-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 DB29_02027 268d3a6b801dc5142a201f0c435c30eb 340 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 234 319 1.6E-26 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DB29_02027 268d3a6b801dc5142a201f0c435c30eb 340 SUPERFAMILY SSF52540 34 304 1.62E-71 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_02027 268d3a6b801dc5142a201f0c435c30eb 340 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 236 301 5.7E-20 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DB29_02027 268d3a6b801dc5142a201f0c435c30eb 340 Pfam PF00005 ABC transporter 27 184 2.7E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB29_02027 268d3a6b801dc5142a201f0c435c30eb 340 SMART SM00382 35 242 6.0E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_02027 268d3a6b801dc5142a201f0c435c30eb 340 Gene3D G3DSA:3.40.50.300 4 336 4.6E-100 T 14-10-2018 DB29_02027 268d3a6b801dc5142a201f0c435c30eb 340 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB29_01064 9be83f822ed694c5c047089408346b64 314 SUPERFAMILY SSF56300 32 292 3.34E-31 T 14-10-2018 DB29_01064 9be83f822ed694c5c047089408346b64 314 Gene3D G3DSA:3.60.21.10 34 280 4.7E-19 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like DB29_01064 9be83f822ed694c5c047089408346b64 314 Pfam PF00149 Calcineurin-like phosphoesterase 35 231 8.1E-14 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 DB29_03433 d2ae7c481e333467220f5beb521a518b 197 Pfam PF00484 Carbonic anhydrase 34 178 7.0E-19 T 14-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 DB29_03433 d2ae7c481e333467220f5beb521a518b 197 SMART SM00947 26 182 8.1E-39 T 14-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 DB29_03433 d2ae7c481e333467220f5beb521a518b 197 Gene3D G3DSA:3.40.1050.10 1 181 1.1E-46 T 14-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 DB29_03433 d2ae7c481e333467220f5beb521a518b 197 SUPERFAMILY SSF53056 4 183 7.06E-42 T 14-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 DB29_01525 f3d9fb4417d1a8a65593794d73b9d114 59 SUPERFAMILY SSF55729 3 57 3.15E-8 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase DB29_01525 f3d9fb4417d1a8a65593794d73b9d114 59 Gene3D G3DSA:3.40.630.30 2 59 7.8E-9 T 14-10-2018 DB29_01106 7252395243f97a5c0cc872e5762baa9a 338 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 7 338 1.2E-116 T 14-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 DB29_01106 7252395243f97a5c0cc872e5762baa9a 338 SUPERFAMILY SSF102114 6 295 3.79E-77 T 14-10-2018 DB29_01106 7252395243f97a5c0cc872e5762baa9a 338 Pfam PF04055 Radical SAM superfamily 19 184 5.6E-31 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 DB29_01106 7252395243f97a5c0cc872e5762baa9a 338 Pfam PF13353 4Fe-4S single cluster domain 22 129 6.8E-7 T 14-10-2018 DB29_01106 7252395243f97a5c0cc872e5762baa9a 338 Pfam PF06463 Molybdenum Cofactor Synthesis C 191 317 1.9E-35 T 14-10-2018 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 DB29_01106 7252395243f97a5c0cc872e5762baa9a 338 SMART SM00729 15 224 2.6E-17 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 DB29_01106 7252395243f97a5c0cc872e5762baa9a 338 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 21 32 - T 14-10-2018 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 DB29_01106 7252395243f97a5c0cc872e5762baa9a 338 Hamap MF_01225_B GTP 3',8-cyclase [moaA]. 6 338 39.448 T 14-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 DB29_01106 7252395243f97a5c0cc872e5762baa9a 338 Gene3D G3DSA:3.20.20.70 3 338 7.7E-101 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DB29_00575 3c538701b425bd8e99abbd03c9e10995 307 Pfam PF00005 ABC transporter 21 162 4.8E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB29_00575 3c538701b425bd8e99abbd03c9e10995 307 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB29_00575 3c538701b425bd8e99abbd03c9e10995 307 SUPERFAMILY SSF52540 3 224 8.88E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_00575 3c538701b425bd8e99abbd03c9e10995 307 Gene3D G3DSA:3.40.50.300 2 239 1.9E-61 T 14-10-2018 DB29_00575 3c538701b425bd8e99abbd03c9e10995 307 SMART SM00382 29 211 1.3E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_03852 90e3456864345057a4f3c9f80daaadb5 425 Gene3D G3DSA:4.10.320.10 110 164 6.1E-21 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 DB29_03852 90e3456864345057a4f3c9f80daaadb5 425 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 193 423 2.5E-87 T 14-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 DB29_03852 90e3456864345057a4f3c9f80daaadb5 425 Pfam PF02817 e3 binding domain 122 156 6.9E-16 T 14-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 DB29_03852 90e3456864345057a4f3c9f80daaadb5 425 SUPERFAMILY SSF52777 191 423 1.16E-87 T 14-10-2018 DB29_03852 90e3456864345057a4f3c9f80daaadb5 425 Gene3D G3DSA:2.40.50.100 2 107 5.5E-24 T 14-10-2018 DB29_03852 90e3456864345057a4f3c9f80daaadb5 425 Gene3D G3DSA:3.30.559.10 176 421 1.6E-90 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 DB29_03852 90e3456864345057a4f3c9f80daaadb5 425 SUPERFAMILY SSF47005 117 161 5.1E-13 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 DB29_03852 90e3456864345057a4f3c9f80daaadb5 425 Pfam PF00364 Biotin-requiring enzyme 6 76 3.2E-21 T 14-10-2018 IPR000089 Biotin/lipoyl attachment DB29_03852 90e3456864345057a4f3c9f80daaadb5 425 SUPERFAMILY SSF51230 3 95 1.57E-25 T 14-10-2018 IPR011053 Single hybrid motif DB29_03852 90e3456864345057a4f3c9f80daaadb5 425 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 27 56 - T 14-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 DB29_01006 4fb0827616a741f1f6a88f41158b2308 402 Gene3D G3DSA:1.20.1090.10 199 397 4.3E-61 T 14-10-2018 DB29_01006 4fb0827616a741f1f6a88f41158b2308 402 Pfam PF00465 Iron-containing alcohol dehydrogenase 19 386 8.6E-117 T 14-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 DB29_01006 4fb0827616a741f1f6a88f41158b2308 402 Gene3D G3DSA:3.40.50.1970 2 197 6.5E-59 T 14-10-2018 DB29_01006 4fb0827616a741f1f6a88f41158b2308 402 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 186 214 - T 14-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 DB29_01006 4fb0827616a741f1f6a88f41158b2308 402 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 273 293 - T 14-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 DB29_01006 4fb0827616a741f1f6a88f41158b2308 402 SUPERFAMILY SSF56796 11 395 1.31E-119 T 14-10-2018 DB29_00833 980b34880f0ed09574b3e35909cfe740 149 PIRSF PIRSF011474 1 148 5.0E-55 T 14-10-2018 IPR009693 Glucitol operon activator DB29_00833 980b34880f0ed09574b3e35909cfe740 149 Pfam PF06923 Glucitol operon activator protein (GutM) 6 111 3.5E-34 T 14-10-2018 IPR009693 Glucitol operon activator DB29_03941 0029f13879cb4a3617478ac1389f3b09 259 Hamap MF_01211 Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit [pyrK]. 5 259 37.843 T 14-10-2018 IPR023455 Dihydroorotate dehydrogenase electron transfer subunit DB29_03941 0029f13879cb4a3617478ac1389f3b09 259 Pfam PF00970 Oxidoreductase FAD-binding domain 8 99 1.8E-4 T 14-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 DB29_03941 0029f13879cb4a3617478ac1389f3b09 259 Pfam PF00175 Oxidoreductase NAD-binding domain 114 202 2.1E-4 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 DB29_03941 0029f13879cb4a3617478ac1389f3b09 259 PRINTS PR00409 Phthalate dioxygenase reductase family signature 190 198 4.4E-6 T 14-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 DB29_03941 0029f13879cb4a3617478ac1389f3b09 259 PRINTS PR00409 Phthalate dioxygenase reductase family signature 54 68 4.4E-6 T 14-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 DB29_03941 0029f13879cb4a3617478ac1389f3b09 259 PRINTS PR00409 Phthalate dioxygenase reductase family signature 113 132 4.4E-6 T 14-10-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 DB29_03941 0029f13879cb4a3617478ac1389f3b09 259 Pfam PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B 217 257 1.0E-16 T 14-10-2018 IPR019480 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain DB29_03941 0029f13879cb4a3617478ac1389f3b09 259 SUPERFAMILY SSF63380 7 101 6.99E-21 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel DB29_03941 0029f13879cb4a3617478ac1389f3b09 259 SUPERFAMILY SSF52343 96 258 1.09E-33 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain DB29_03941 0029f13879cb4a3617478ac1389f3b09 259 Gene3D G3DSA:3.40.50.80 104 216 1.1E-26 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain DB29_03941 0029f13879cb4a3617478ac1389f3b09 259 PIRSF PIRSF006816 2 259 2.3E-69 T 14-10-2018 IPR012165 Cytochrome-c3 hydrogenase, gamma subunit GO:0006221|GO:0050660|GO:0051537 DB29_03941 0029f13879cb4a3617478ac1389f3b09 259 Gene3D G3DSA:2.40.30.10 1 99 2.0E-27 T 14-10-2018 DB29_03941 0029f13879cb4a3617478ac1389f3b09 259 Gene3D G3DSA:2.10.240.10 217 259 3.3E-16 T 14-10-2018 IPR037117 Dihydroorotate dehydrogenase, electron transfer subunit, Fe-S binding domain superfamily DB29_02346 938f5fdfc2a332137b8944540f51a709 504 Gene3D G3DSA:1.20.150.20 373 500 6.5E-54 T 14-10-2018 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DB29_02346 938f5fdfc2a332137b8944540f51a709 504 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 4 500 8.8E-259 T 14-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DB29_02346 938f5fdfc2a332137b8944540f51a709 504 SUPERFAMILY SSF47917 373 501 7.59E-50 T 14-10-2018 DB29_02346 938f5fdfc2a332137b8944540f51a709 504 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 2 500 51.639 T 14-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DB29_02346 938f5fdfc2a332137b8944540f51a709 504 SUPERFAMILY SSF52540 96 371 8.61E-100 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_02346 938f5fdfc2a332137b8944540f51a709 504 Gene3D G3DSA:2.40.30.20 2 94 1.2E-35 T 14-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DB29_02346 938f5fdfc2a332137b8944540f51a709 504 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 150 365 2.6E-73 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DB29_02346 938f5fdfc2a332137b8944540f51a709 504 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 26 93 3.0E-20 T 14-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DB29_02346 938f5fdfc2a332137b8944540f51a709 504 PIRSF PIRSF039088 2 502 2.8E-252 T 14-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DB29_02346 938f5fdfc2a332137b8944540f51a709 504 Gene3D G3DSA:3.40.50.300 95 372 1.9E-127 T 14-10-2018 DB29_02346 938f5fdfc2a332137b8944540f51a709 504 SUPERFAMILY SSF50615 11 95 5.23E-30 T 14-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DB29_02346 938f5fdfc2a332137b8944540f51a709 504 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 372 495 7.9E-48 T 14-10-2018 IPR000793 ATP synthase, alpha subunit, C-terminal GO:0015986 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DB29_02346 938f5fdfc2a332137b8944540f51a709 504 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 356 365 - T 14-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DB29_01268 37000fe6a9460ab8e5f868eb28e6ec6e 168 Gene3D G3DSA:3.40.630.30 1 167 2.1E-41 T 14-10-2018 DB29_01268 37000fe6a9460ab8e5f868eb28e6ec6e 168 SUPERFAMILY SSF55729 1 161 5.14E-27 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase DB29_01268 37000fe6a9460ab8e5f868eb28e6ec6e 168 Pfam PF13673 Acetyltransferase (GNAT) domain 27 150 3.5E-13 T 14-10-2018 IPR000182 GNAT domain DB29_02610 4258c17c27683594a8bc874bcc31d9f3 265 SMART SM01134 80 242 1.9E-60 T 14-10-2018 DB29_02610 4258c17c27683594a8bc874bcc31d9f3 265 SUPERFAMILY SSF100950 81 243 3.77E-27 T 14-10-2018 IPR037171 NagB/RpiA transferase-like DB29_02610 4258c17c27683594a8bc874bcc31d9f3 265 Pfam PF08220 DeoR-like helix-turn-helix domain 9 63 2.8E-18 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DB29_02610 4258c17c27683594a8bc874bcc31d9f3 265 SMART SM00420 9 61 1.3E-18 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DB29_02610 4258c17c27683594a8bc874bcc31d9f3 265 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 41 59 1.1E-8 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DB29_02610 4258c17c27683594a8bc874bcc31d9f3 265 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 27 41 1.1E-8 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DB29_02610 4258c17c27683594a8bc874bcc31d9f3 265 Gene3D G3DSA:1.10.10.10 1 61 9.3E-10 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_02610 4258c17c27683594a8bc874bcc31d9f3 265 SUPERFAMILY SSF46785 8 63 1.12E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_02610 4258c17c27683594a8bc874bcc31d9f3 265 Pfam PF00455 DeoR C terminal sensor domain 82 240 2.9E-45 T 14-10-2018 IPR014036 DeoR C-terminal sensor domain DB29_00450 e8ffee1deeaa124560ffc083767a0298 171 Gene3D G3DSA:3.40.50.2020 1 171 1.1E-58 T 14-10-2018 DB29_00450 e8ffee1deeaa124560ffc083767a0298 171 Pfam PF00156 Phosphoribosyl transferase domain 30 149 2.8E-17 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 DB29_00450 e8ffee1deeaa124560ffc083767a0298 171 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 3 170 36.575 T 14-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 DB29_00450 e8ffee1deeaa124560ffc083767a0298 171 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 4 170 9.7E-68 T 14-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 DB29_00450 e8ffee1deeaa124560ffc083767a0298 171 SUPERFAMILY SSF53271 3 163 1.05E-47 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like DB29_04051 ad4973e49fabc9c95ed53cb2f3151836 118 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 4 108 28.075 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 DB29_04051 ad4973e49fabc9c95ed53cb2f3151836 118 ProSitePatterns PS01319 Ribosome-binding factor A signature. 74 95 - T 14-10-2018 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 DB29_04051 ad4973e49fabc9c95ed53cb2f3151836 118 SUPERFAMILY SSF89919 3 111 3.14E-37 T 14-10-2018 IPR023799 Ribosome-binding factor A domain superfamily DB29_04051 ad4973e49fabc9c95ed53cb2f3151836 118 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 4 113 8.5E-39 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 DB29_04051 ad4973e49fabc9c95ed53cb2f3151836 118 Pfam PF02033 Ribosome-binding factor A 5 108 4.6E-34 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 DB29_04051 ad4973e49fabc9c95ed53cb2f3151836 118 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 8 95 2.0E-36 T 14-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 DB29_04051 ad4973e49fabc9c95ed53cb2f3151836 118 Gene3D G3DSA:3.30.300.20 1 117 8.2E-39 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta DB29_00756 0c62f84f3067a3fac164d893f2e9792f 261 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 2 248 2.1E-89 T 14-10-2018 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 DB29_00756 0c62f84f3067a3fac164d893f2e9792f 261 Gene3D G3DSA:1.10.3720.10 1 252 6.3E-59 T 14-10-2018 IPR035906 MetI-like superfamily DB29_00756 0c62f84f3067a3fac164d893f2e9792f 261 SUPERFAMILY SSF161098 2 245 7.06E-51 T 14-10-2018 IPR035906 MetI-like superfamily DB29_00756 0c62f84f3067a3fac164d893f2e9792f 261 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 54 248 1.1E-14 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DB29_00756 0c62f84f3067a3fac164d893f2e9792f 261 TIGRFAM TIGR02140 permease_CysW: sulfate ABC transporter, permease protein CysW 2 250 5.6E-117 T 14-10-2018 IPR011866 Sulphate ABC transporter, permease protein CysW GO:0008272|GO:0015116|GO:0016021 DB29_00853 9c9a3270901023daa0ca38a3ef04c2e6 244 Pfam PF01370 NAD dependent epimerase/dehydratase family 5 174 3.4E-14 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 DB29_00853 9c9a3270901023daa0ca38a3ef04c2e6 244 Gene3D G3DSA:3.40.50.720 2 240 2.7E-29 T 14-10-2018 DB29_00853 9c9a3270901023daa0ca38a3ef04c2e6 244 SUPERFAMILY SSF51735 3 229 2.81E-22 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_01110 65199c7d4cde7158a22561c3c412ce6b 479 Gene3D G3DSA:1.20.140.10 273 479 3.1E-69 T 14-10-2018 DB29_01110 65199c7d4cde7158a22561c3c412ce6b 479 Gene3D G3DSA:2.40.110.10 144 269 5.0E-34 T 14-10-2018 DB29_01110 65199c7d4cde7158a22561c3c412ce6b 479 SUPERFAMILY SSF56645 3 269 3.21E-63 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 DB29_01110 65199c7d4cde7158a22561c3c412ce6b 479 Pfam PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal 276 475 8.1E-55 T 14-10-2018 IPR024719 HpaB/PvcC/4-BUDH C-terminal DB29_01110 65199c7d4cde7158a22561c3c412ce6b 479 SUPERFAMILY SSF47203 259 475 4.71E-55 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 DB29_01110 65199c7d4cde7158a22561c3c412ce6b 479 PIRSF PIRSF000331 1 479 4.0E-126 T 14-10-2018 IPR004925 HpaB/PvcC/4-BUDH DB29_01110 65199c7d4cde7158a22561c3c412ce6b 479 Gene3D G3DSA:1.10.3140.10 3 142 5.7E-37 T 14-10-2018 DB29_01110 65199c7d4cde7158a22561c3c412ce6b 479 Pfam PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal 5 268 2.7E-77 T 14-10-2018 IPR024674 HpaB/PvcC/4-BUDH N-terminal DB29_04109 e4afe49f415f40b21fe526389f0166aa 248 SUPERFAMILY SSF46785 7 80 3.13E-14 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_04109 e4afe49f415f40b21fe526389f0166aa 248 SUPERFAMILY SSF55781 72 247 9.81E-42 T 14-10-2018 DB29_04109 e4afe49f415f40b21fe526389f0166aa 248 SMART SM00346 7 100 4.9E-16 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 DB29_04109 e4afe49f415f40b21fe526389f0166aa 248 Gene3D G3DSA:3.30.450.40 80 248 6.5E-47 T 14-10-2018 IPR029016 GAF-like domain superfamily DB29_04109 e4afe49f415f40b21fe526389f0166aa 248 Gene3D G3DSA:1.10.10.10 2 79 4.3E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_04109 e4afe49f415f40b21fe526389f0166aa 248 Pfam PF01614 Bacterial transcriptional regulator 127 246 3.2E-27 T 14-10-2018 IPR014757 Transcription regulator IclR, C-terminal DB29_04109 e4afe49f415f40b21fe526389f0166aa 248 Pfam PF09339 IclR helix-turn-helix domain 9 59 2.9E-11 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 DB29_01822 d5663d3611988bde3294d008302aec91 446 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 157 252 1.2E-15 T 14-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DB29_01822 d5663d3611988bde3294d008302aec91 446 SUPERFAMILY SSF55957 356 445 1.44E-26 T 14-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DB29_01822 d5663d3611988bde3294d008302aec91 446 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 3 135 2.9E-44 T 14-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DB29_01822 d5663d3611988bde3294d008302aec91 446 SUPERFAMILY SSF53738 256 364 7.46E-35 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DB29_01822 d5663d3611988bde3294d008302aec91 446 Gene3D G3DSA:3.40.120.10 3 154 4.9E-56 T 14-10-2018 DB29_01822 d5663d3611988bde3294d008302aec91 446 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 256 367 4.0E-37 T 14-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DB29_01822 d5663d3611988bde3294d008302aec91 446 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 232 247 2.6E-13 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DB29_01822 d5663d3611988bde3294d008302aec91 446 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 93 107 2.6E-13 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DB29_01822 d5663d3611988bde3294d008302aec91 446 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 172 191 2.6E-13 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DB29_01822 d5663d3611988bde3294d008302aec91 446 Gene3D G3DSA:3.40.120.10 172 361 9.0E-74 T 14-10-2018 DB29_01822 d5663d3611988bde3294d008302aec91 446 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 1 443 45.429 T 14-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DB29_01822 d5663d3611988bde3294d008302aec91 446 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 5 442 4.1E-186 T 14-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DB29_01822 d5663d3611988bde3294d008302aec91 446 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 372 440 8.4E-18 T 14-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DB29_01822 d5663d3611988bde3294d008302aec91 446 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 94 103 - T 14-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DB29_01822 d5663d3611988bde3294d008302aec91 446 Gene3D G3DSA:3.40.120.10 255 338 9.0E-74 T 14-10-2018 DB29_01822 d5663d3611988bde3294d008302aec91 446 SUPERFAMILY SSF53738 3 179 4.71E-45 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DB29_01822 d5663d3611988bde3294d008302aec91 446 SUPERFAMILY SSF53738 157 255 1.49E-25 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DB29_01822 d5663d3611988bde3294d008302aec91 446 Gene3D G3DSA:3.30.310.50 369 446 1.4E-29 T 14-10-2018 DB29_00237 bcb3f4bd6261e31ca2ea81909c9335c4 100 Gene3D G3DSA:1.10.1660.10 1 85 4.4E-22 T 14-10-2018 DB29_00237 bcb3f4bd6261e31ca2ea81909c9335c4 100 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 21 34 7.5E-5 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DB29_00237 bcb3f4bd6261e31ca2ea81909c9335c4 100 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 44 64 7.5E-5 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DB29_00237 bcb3f4bd6261e31ca2ea81909c9335c4 100 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 10 21 7.5E-5 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DB29_00237 bcb3f4bd6261e31ca2ea81909c9335c4 100 SUPERFAMILY SSF46955 9 80 1.37E-16 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily DB29_00237 bcb3f4bd6261e31ca2ea81909c9335c4 100 SMART SM00422 9 77 4.1E-16 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DB29_00237 bcb3f4bd6261e31ca2ea81909c9335c4 100 Pfam PF13411 MerR HTH family regulatory protein 10 75 4.8E-15 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DB29_03611 a0ac5876f041a00bf838d2411733ee79 514 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 11 27 - T 14-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 DB29_03611 a0ac5876f041a00bf838d2411733ee79 514 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 1 508 42.75 T 14-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 DB29_03611 a0ac5876f041a00bf838d2411733ee79 514 Pfam PF00682 HMGL-like 3 272 1.9E-90 T 14-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 DB29_03611 a0ac5876f041a00bf838d2411733ee79 514 SUPERFAMILY SSF110921 401 498 7.85E-20 T 14-10-2018 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 DB29_03611 a0ac5876f041a00bf838d2411733ee79 514 SMART SM00917 367 499 1.2E-32 T 14-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 DB29_03611 a0ac5876f041a00bf838d2411733ee79 514 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 198 211 - T 14-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 DB29_03611 a0ac5876f041a00bf838d2411733ee79 514 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 3 496 1.9E-217 T 14-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 DB29_03611 a0ac5876f041a00bf838d2411733ee79 514 Pfam PF08502 LeuA allosteric (dimerisation) domain 367 498 1.7E-35 T 14-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 DB29_03611 a0ac5876f041a00bf838d2411733ee79 514 Gene3D G3DSA:3.20.20.70 1 275 2.6E-110 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DB29_03611 a0ac5876f041a00bf838d2411733ee79 514 Gene3D G3DSA:1.10.238.260 279 391 2.7E-38 T 14-10-2018 DB29_03611 a0ac5876f041a00bf838d2411733ee79 514 SUPERFAMILY SSF51569 2 290 1.06E-94 T 14-10-2018 DB29_03611 a0ac5876f041a00bf838d2411733ee79 514 Gene3D G3DSA:3.30.160.270 392 500 1.6E-9 T 14-10-2018 DB29_04373 a94ac97c9715552bc0ee8928a1ed6350 807 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 507 528 0.013 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 DB29_04373 a94ac97c9715552bc0ee8928a1ed6350 807 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 549 598 3.3E-5 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 DB29_04373 a94ac97c9715552bc0ee8928a1ed6350 807 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 606 650 5.4E-7 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 DB29_04373 a94ac97c9715552bc0ee8928a1ed6350 807 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 708 754 1.9E-4 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 DB29_04373 a94ac97c9715552bc0ee8928a1ed6350 807 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 654 698 7.6E-10 T 14-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 DB29_04373 a94ac97c9715552bc0ee8928a1ed6350 807 TIGRFAM TIGR01061 parC_Gpos: DNA topoisomerase IV, A subunit 9 746 0.0 T 14-10-2018 IPR005741 DNA topoisomerase IV subunit A, Gram-positive GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 DB29_04373 a94ac97c9715552bc0ee8928a1ed6350 807 Gene3D G3DSA:3.30.1360.40 235 331 4.0E-197 T 14-10-2018 DB29_04373 a94ac97c9715552bc0ee8928a1ed6350 807 SUPERFAMILY SSF101904 499 805 1.96E-85 T 14-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal DB29_04373 a94ac97c9715552bc0ee8928a1ed6350 807 SUPERFAMILY SSF56719 30 485 6.28E-169 T 14-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 DB29_04373 a94ac97c9715552bc0ee8928a1ed6350 807 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 31 470 2.7E-151 T 14-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 DB29_04373 a94ac97c9715552bc0ee8928a1ed6350 807 Gene3D G3DSA:2.120.10.90 499 807 9.9E-89 T 14-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal DB29_04373 a94ac97c9715552bc0ee8928a1ed6350 807 Hamap MF_00937 DNA topoisomerase 4 subunit A [parC]. 6 805 32.096 T 14-10-2018 IPR005741 DNA topoisomerase IV subunit A, Gram-positive GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 DB29_04373 a94ac97c9715552bc0ee8928a1ed6350 807 SMART SM00434 10 463 3.6E-253 T 14-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 DB29_04373 a94ac97c9715552bc0ee8928a1ed6350 807 Gene3D G3DSA:1.10.268.10 368 456 4.0E-197 T 14-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 DB29_04373 a94ac97c9715552bc0ee8928a1ed6350 807 Gene3D G3DSA:3.90.199.10 31 485 4.0E-197 T 14-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 DB29_01923 63f2307a348d430eb8219a24fa15011d 221 SUPERFAMILY SSF51161 7 170 8.32E-56 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily DB29_01923 63f2307a348d430eb8219a24fa15011d 221 Gene3D G3DSA:2.160.10.10 69 185 2.2E-36 T 14-10-2018 DB29_01923 63f2307a348d430eb8219a24fa15011d 221 Gene3D G3DSA:1.10.3130.10 2 68 2.3E-24 T 14-10-2018 DB29_01923 63f2307a348d430eb8219a24fa15011d 221 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 9 168 1.3E-78 T 14-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 DB29_01923 63f2307a348d430eb8219a24fa15011d 221 PIRSF PIRSF000441 1 221 2.0E-82 T 14-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 DB29_01923 63f2307a348d430eb8219a24fa15011d 221 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 73 110 1.9E-4 T 14-10-2018 IPR001451 Hexapeptide repeat DB29_01923 63f2307a348d430eb8219a24fa15011d 221 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 120 153 2.1E-6 T 14-10-2018 IPR001451 Hexapeptide repeat DB29_01562 d1055871d33e54748d20ee2b0116bb8a 431 PIRSF PIRSF006351 1 430 9.0E-144 T 14-10-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 DB29_01562 d1055871d33e54748d20ee2b0116bb8a 431 Pfam PF02378 Phosphotransferase system, EIIC 29 348 3.3E-64 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 DB29_01562 d1055871d33e54748d20ee2b0116bb8a 431 TIGRFAM TIGR00359 cello_pts_IIC: PTS system, cellobiose-specific IIC component 12 422 1.5E-149 T 14-10-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 DB29_01562 d1055871d33e54748d20ee2b0116bb8a 431 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 12 422 1.5E-149 T 14-10-2018 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 DB29_00264 da15bdd5151b240f9095273fb66b5c9d 272 Pfam PF08543 Phosphomethylpyrimidine kinase 13 258 4.6E-93 T 14-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 DB29_00264 da15bdd5151b240f9095273fb66b5c9d 272 SUPERFAMILY SSF53613 1 261 1.11E-79 T 14-10-2018 IPR029056 Ribokinase-like DB29_00264 da15bdd5151b240f9095273fb66b5c9d 272 Gene3D G3DSA:3.40.1190.20 1 267 1.7E-98 T 14-10-2018 IPR029056 Ribokinase-like DB29_00264 da15bdd5151b240f9095273fb66b5c9d 272 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 6 259 2.6E-93 T 14-10-2018 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 DB29_01604 4fd4cb1e017c37633678e32b492d6923 497 Gene3D G3DSA:3.90.1210.30 4 86 4.8E-28 T 14-10-2018 DB29_01604 4fd4cb1e017c37633678e32b492d6923 497 Pfam PF08666 SAF domain 12 82 6.0E-14 T 14-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 DB29_01604 4fd4cb1e017c37633678e32b492d6923 497 Pfam PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus 109 496 7.7E-158 T 14-10-2018 IPR007392 D-galactarate/Altronate dehydratase, C-terminal GO:0016829 DB29_01604 4fd4cb1e017c37633678e32b492d6923 497 SMART SM00858 12 83 1.4E-15 T 14-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 DB29_02471 8b41b33cce02816f0b7d2040ef2e09a6 324 TIGRFAM TIGR03383 urate_oxi: urate oxidase 4 307 2.4E-85 T 14-10-2018 IPR002042 Uricase KEGG: 00230+1.7.3.3|KEGG: 00232+1.7.3.3|MetaCyc: PWY-5691 DB29_02471 8b41b33cce02816f0b7d2040ef2e09a6 324 PRINTS PR00093 Uricase signature 187 199 4.3E-12 T 14-10-2018 IPR002042 Uricase KEGG: 00230+1.7.3.3|KEGG: 00232+1.7.3.3|MetaCyc: PWY-5691 DB29_02471 8b41b33cce02816f0b7d2040ef2e09a6 324 PRINTS PR00093 Uricase signature 64 78 4.3E-12 T 14-10-2018 IPR002042 Uricase KEGG: 00230+1.7.3.3|KEGG: 00232+1.7.3.3|MetaCyc: PWY-5691 DB29_02471 8b41b33cce02816f0b7d2040ef2e09a6 324 PRINTS PR00093 Uricase signature 171 187 4.3E-12 T 14-10-2018 IPR002042 Uricase KEGG: 00230+1.7.3.3|KEGG: 00232+1.7.3.3|MetaCyc: PWY-5691 DB29_02471 8b41b33cce02816f0b7d2040ef2e09a6 324 PRINTS PR00093 Uricase signature 100 113 4.3E-12 T 14-10-2018 IPR002042 Uricase KEGG: 00230+1.7.3.3|KEGG: 00232+1.7.3.3|MetaCyc: PWY-5691 DB29_02471 8b41b33cce02816f0b7d2040ef2e09a6 324 SUPERFAMILY SSF55620 157 308 6.95E-47 T 14-10-2018 DB29_02471 8b41b33cce02816f0b7d2040ef2e09a6 324 PIRSF PIRSF000241 2 316 5.8E-94 T 14-10-2018 IPR002042 Uricase KEGG: 00230+1.7.3.3|KEGG: 00232+1.7.3.3|MetaCyc: PWY-5691 DB29_02471 8b41b33cce02816f0b7d2040ef2e09a6 324 Gene3D G3DSA:3.10.270.10 3 324 6.4E-108 T 14-10-2018 DB29_02471 8b41b33cce02816f0b7d2040ef2e09a6 324 SUPERFAMILY SSF55620 7 149 3.61E-35 T 14-10-2018 DB29_02471 8b41b33cce02816f0b7d2040ef2e09a6 324 Pfam PF01014 Uricase 40 135 2.5E-8 T 14-10-2018 IPR002042 Uricase KEGG: 00230+1.7.3.3|KEGG: 00232+1.7.3.3|MetaCyc: PWY-5691 DB29_02471 8b41b33cce02816f0b7d2040ef2e09a6 324 Pfam PF01014 Uricase 170 300 3.5E-17 T 14-10-2018 IPR002042 Uricase KEGG: 00230+1.7.3.3|KEGG: 00232+1.7.3.3|MetaCyc: PWY-5691 DB29_02506 516fc7de6b5345a845b7ba23842bd44c 374 Gene3D G3DSA:3.30.300.210 218 372 2.6E-37 T 14-10-2018 IPR038501 Spore germination GerAC superfamily DB29_02506 516fc7de6b5345a845b7ba23842bd44c 374 TIGRFAM TIGR02887 spore_ger_x_C: germination protein, Ger(x)C family 1 370 4.6E-100 T 14-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 DB29_02506 516fc7de6b5345a845b7ba23842bd44c 374 Pfam PF05504 Spore germination B3/ GerAC like, C-terminal 203 368 1.0E-28 T 14-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 DB29_04246 b33c35185a520a79536b02eb591b4965 312 Gene3D G3DSA:3.40.630.40 1 180 3.1E-56 T 14-10-2018 DB29_04246 b33c35185a520a79536b02eb591b4965 312 SUPERFAMILY SSF158634 202 247 1.31E-9 T 14-10-2018 DB29_04246 b33c35185a520a79536b02eb591b4965 312 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 4 172 8.1E-47 T 14-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 DB29_04246 b33c35185a520a79536b02eb591b4965 312 SUPERFAMILY SSF158634 266 310 2.35E-11 T 14-10-2018 DB29_04246 b33c35185a520a79536b02eb591b4965 312 SMART SM00646 64 172 9.6E-45 T 14-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 DB29_04246 b33c35185a520a79536b02eb591b4965 312 SUPERFAMILY SSF53187 1 177 3.45E-52 T 14-10-2018 DB29_04246 b33c35185a520a79536b02eb591b4965 312 Pfam PF12200 Domain of unknown function (DUF3597) 266 310 4.9E-8 T 14-10-2018 IPR022016 Domain of unknown function DUF3597 DB29_03592 85264a3b1a1249b1048b81f20eab0130 74 Gene3D G3DSA:1.10.10.10 2 73 5.3E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_03592 85264a3b1a1249b1048b81f20eab0130 74 Pfam PF00196 Bacterial regulatory proteins, luxR family 12 64 4.9E-23 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DB29_03592 85264a3b1a1249b1048b81f20eab0130 74 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 42 54 6.2E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DB29_03592 85264a3b1a1249b1048b81f20eab0130 74 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 12 26 6.2E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DB29_03592 85264a3b1a1249b1048b81f20eab0130 74 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 26 42 6.2E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DB29_03592 85264a3b1a1249b1048b81f20eab0130 74 ProSitePatterns PS00622 LuxR-type HTH domain signature. 26 53 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DB29_03592 85264a3b1a1249b1048b81f20eab0130 74 SMART SM00421 9 66 1.9E-23 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DB29_03592 85264a3b1a1249b1048b81f20eab0130 74 SUPERFAMILY SSF46894 8 71 4.42E-22 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DB29_03823 649e7cf1156853362262ba551c8b8fbf 257 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 6 224 1.6E-23 T 14-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 DB29_03823 649e7cf1156853362262ba551c8b8fbf 257 SUPERFAMILY SSF56784 4 252 8.16E-65 T 14-10-2018 IPR036412 HAD-like superfamily DB29_03823 649e7cf1156853362262ba551c8b8fbf 257 Gene3D G3DSA:3.30.1240.10 81 180 3.1E-79 T 14-10-2018 DB29_03823 649e7cf1156853362262ba551c8b8fbf 257 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 247 1.8E-62 T 14-10-2018 DB29_03823 649e7cf1156853362262ba551c8b8fbf 257 Gene3D G3DSA:3.40.50.1000 6 247 3.1E-79 T 14-10-2018 IPR023214 HAD superfamily DB29_03823 649e7cf1156853362262ba551c8b8fbf 257 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 6 247 1.2E-60 T 14-10-2018 IPR000150 Cof family GO:0016787 DB29_03823 649e7cf1156853362262ba551c8b8fbf 257 ProSitePatterns PS01229 Hypothetical cof family signature 2. 205 227 - T 14-10-2018 DB29_00203 a7a25283073466c1cd81265cf1a52a3f 388 Gene3D G3DSA:3.40.710.10 20 278 1.7E-88 T 14-10-2018 DB29_00203 a7a25283073466c1cd81265cf1a52a3f 388 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 280 370 3.6E-19 T 14-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 DB29_00203 a7a25283073466c1cd81265cf1a52a3f 388 SUPERFAMILY SSF69189 280 372 1.61E-19 T 14-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 DB29_00203 a7a25283073466c1cd81265cf1a52a3f 388 SMART SM00936 280 371 7.5E-27 T 14-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 DB29_00203 a7a25283073466c1cd81265cf1a52a3f 388 Gene3D G3DSA:2.60.410.10 280 371 3.7E-21 T 14-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 DB29_00203 a7a25283073466c1cd81265cf1a52a3f 388 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 63 74 6.1E-18 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 DB29_00203 a7a25283073466c1cd81265cf1a52a3f 388 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 116 133 6.1E-18 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 DB29_00203 a7a25283073466c1cd81265cf1a52a3f 388 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 143 156 6.1E-18 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 DB29_00203 a7a25283073466c1cd81265cf1a52a3f 388 SUPERFAMILY SSF56601 3 280 3.61E-78 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like DB29_00203 a7a25283073466c1cd81265cf1a52a3f 388 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 33 261 4.2E-85 T 14-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 DB29_02413 b46a01d31a54c863ce7f9ee95886fe5e 112 SUPERFAMILY SSF63520 7 109 4.19E-30 T 14-10-2018 IPR036634 PRD domain superfamily GO:0006355 DB29_02413 b46a01d31a54c863ce7f9ee95886fe5e 112 Gene3D G3DSA:1.10.1790.10 4 112 1.6E-41 T 14-10-2018 DB29_02413 b46a01d31a54c863ce7f9ee95886fe5e 112 Pfam PF00874 PRD domain 16 108 8.9E-20 T 14-10-2018 IPR011608 PRD domain GO:0006355 DB29_04053 4b249be270f56f6971eb76c102a4800e 316 Pfam PF06574 FAD synthetase 14 168 5.5E-51 T 14-10-2018 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 DB29_04053 4b249be270f56f6971eb76c102a4800e 316 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 20 310 7.1E-95 T 14-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 DB29_04053 4b249be270f56f6971eb76c102a4800e 316 PIRSF PIRSF004491 5 316 1.8E-101 T 14-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 DB29_04053 4b249be270f56f6971eb76c102a4800e 316 SUPERFAMILY SSF52374 18 179 2.09E-30 T 14-10-2018 DB29_04053 4b249be270f56f6971eb76c102a4800e 316 Pfam PF01687 Riboflavin kinase 185 308 5.2E-34 T 14-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 DB29_04053 4b249be270f56f6971eb76c102a4800e 316 Gene3D G3DSA:2.40.30.30 190 308 9.1E-38 T 14-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 DB29_04053 4b249be270f56f6971eb76c102a4800e 316 Gene3D G3DSA:3.40.50.620 7 187 1.1E-57 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DB29_04053 4b249be270f56f6971eb76c102a4800e 316 SMART SM00904 184 310 3.5E-57 T 14-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 DB29_04053 4b249be270f56f6971eb76c102a4800e 316 SUPERFAMILY SSF82114 175 312 7.19E-44 T 14-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 DB29_03346 0b2080264df09ce49cbdfa5fea0f4dcb 103 SUPERFAMILY SSF102891 1 99 1.1E-35 T 14-10-2018 IPR036493 Hypothetical protein YunC superfamily DB29_03346 0b2080264df09ce49cbdfa5fea0f4dcb 103 Gene3D G3DSA:3.30.1980.10 1 100 6.5E-24 T 14-10-2018 IPR036493 Hypothetical protein YunC superfamily DB29_03346 0b2080264df09ce49cbdfa5fea0f4dcb 103 Pfam PF08827 Domain of unknown function (DUF1805) 37 99 5.4E-25 T 14-10-2018 IPR014931 Protein of unknown function DUF1805 DB29_00927 1c6743b30de2e9a2f3cd60674ddce163 310 SUPERFAMILY SSF53850 212 308 2.17E-22 T 14-10-2018 DB29_00927 1c6743b30de2e9a2f3cd60674ddce163 310 Gene3D G3DSA:3.40.190.230 56 307 4.0E-105 T 14-10-2018 DB29_00927 1c6743b30de2e9a2f3cd60674ddce163 310 SUPERFAMILY SSF53850 56 206 2.13E-44 T 14-10-2018 DB29_00927 1c6743b30de2e9a2f3cd60674ddce163 310 Gene3D G3DSA:3.10.105.10 134 288 4.0E-105 T 14-10-2018 DB29_00927 1c6743b30de2e9a2f3cd60674ddce163 310 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 57 189 1.1E-36 T 14-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 DB29_00927 1c6743b30de2e9a2f3cd60674ddce163 310 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 215 309 9.9E-14 T 14-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 DB29_04185 e4496bc9a7b560205364e1260cb9dbf8 302 SMART SM00279 182 217 3.3E-12 T 14-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 DB29_04185 e4496bc9a7b560205364e1260cb9dbf8 302 Gene3D G3DSA:1.10.150.20 183 258 7.8E-70 T 14-10-2018 DB29_04185 e4496bc9a7b560205364e1260cb9dbf8 302 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 181 262 8.6E-26 T 14-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 DB29_04185 e4496bc9a7b560205364e1260cb9dbf8 302 Gene3D G3DSA:3.40.50.1010 7 263 7.8E-70 T 14-10-2018 DB29_04185 e4496bc9a7b560205364e1260cb9dbf8 302 SMART SM00475 2 279 1.6E-56 T 14-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 DB29_04185 e4496bc9a7b560205364e1260cb9dbf8 302 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 7 179 3.2E-38 T 14-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 DB29_04185 e4496bc9a7b560205364e1260cb9dbf8 302 SUPERFAMILY SSF88723 6 179 1.05E-36 T 14-10-2018 IPR029060 PIN-like domain superfamily DB29_04185 e4496bc9a7b560205364e1260cb9dbf8 302 SUPERFAMILY SSF47807 180 263 2.09E-23 T 14-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily DB29_00398 b58bc8987a048cbd55f4ba705db60b63 330 Gene3D G3DSA:3.30.390.50 244 330 9.1E-32 T 14-10-2018 DB29_00398 b58bc8987a048cbd55f4ba705db60b63 330 Gene3D G3DSA:3.30.930.10 3 243 1.0E-81 T 14-10-2018 DB29_00398 b58bc8987a048cbd55f4ba705db60b63 330 Pfam PF03099 Biotin/lipoate A/B protein ligase family 47 153 7.2E-11 T 14-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 DB29_00398 b58bc8987a048cbd55f4ba705db60b63 330 Pfam PF10437 Bacterial lipoate protein ligase C-terminus 245 329 5.5E-32 T 14-10-2018 IPR019491 Lipoate protein ligase, C-terminal KEGG: 00785+6.3.1.20 DB29_00398 b58bc8987a048cbd55f4ba705db60b63 330 SUPERFAMILY SSF82649 244 330 2.14E-28 T 14-10-2018 DB29_00398 b58bc8987a048cbd55f4ba705db60b63 330 SUPERFAMILY SSF55681 4 243 4.69E-81 T 14-10-2018 DB29_00398 b58bc8987a048cbd55f4ba705db60b63 330 TIGRFAM TIGR00545 lipoyltrans: lipoyltransferase and lipoate-protein ligase 2 324 2.4E-130 T 14-10-2018 IPR004562 Lipoyltransferase/lipoate-protein ligase GO:0009249 KEGG: 00785+6.3.1.20|Reactome: R-HSA-389661 DB29_03690 7b443b6a39e086dc285ccf6d2b9dc262 997 Pfam PF12419 SNF2 Helicase protein 349 472 1.6E-21 T 14-10-2018 IPR022138 Helicase SWF/SNF-related DB29_03690 7b443b6a39e086dc285ccf6d2b9dc262 997 SMART SM00487 519 710 5.4E-31 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DB29_03690 7b443b6a39e086dc285ccf6d2b9dc262 997 SUPERFAMILY SSF52540 641 977 7.58E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_03690 7b443b6a39e086dc285ccf6d2b9dc262 997 Pfam PF00176 SNF2 family N-terminal domain 537 806 1.3E-59 T 14-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 DB29_03690 7b443b6a39e086dc285ccf6d2b9dc262 997 SUPERFAMILY SSF52540 496 737 4.7E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_03690 7b443b6a39e086dc285ccf6d2b9dc262 997 SMART SM00490 850 934 2.1E-21 T 14-10-2018 IPR001650 Helicase, C-terminal DB29_03690 7b443b6a39e086dc285ccf6d2b9dc262 997 Gene3D G3DSA:1.20.120.850 761 983 7.7E-83 T 14-10-2018 DB29_03690 7b443b6a39e086dc285ccf6d2b9dc262 997 Gene3D G3DSA:3.40.50.10810 524 738 2.4E-71 T 14-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily DB29_03690 7b443b6a39e086dc285ccf6d2b9dc262 997 Gene3D G3DSA:3.40.50.300 747 948 7.7E-83 T 14-10-2018 DB29_03690 7b443b6a39e086dc285ccf6d2b9dc262 997 Pfam PF00271 Helicase conserved C-terminal domain 824 934 7.3E-16 T 14-10-2018 IPR001650 Helicase, C-terminal DB29_02564 a9b084b98cd461d2ca3d30f0b99d737f 396 Pfam PF07687 Peptidase dimerisation domain 172 265 8.6E-12 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain DB29_02564 a9b084b98cd461d2ca3d30f0b99d737f 396 SUPERFAMILY SSF53187 10 377 6.29E-67 T 14-10-2018 DB29_02564 a9b084b98cd461d2ca3d30f0b99d737f 396 SUPERFAMILY SSF55031 173 280 7.72E-21 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain DB29_02564 a9b084b98cd461d2ca3d30f0b99d737f 396 Gene3D G3DSA:3.30.70.360 171 287 6.3E-125 T 14-10-2018 DB29_02564 a9b084b98cd461d2ca3d30f0b99d737f 396 Pfam PF01546 Peptidase family M20/M25/M40 96 343 4.4E-11 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 DB29_02564 a9b084b98cd461d2ca3d30f0b99d737f 396 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 24 342 5.6E-66 T 14-10-2018 IPR017439 Amidohydrolase GO:0016787 DB29_02564 a9b084b98cd461d2ca3d30f0b99d737f 396 Gene3D G3DSA:3.40.630.10 25 363 6.3E-125 T 14-10-2018 DB29_02564 a9b084b98cd461d2ca3d30f0b99d737f 396 PIRSF PIRSF037226 2 396 4.5E-170 T 14-10-2018 IPR017144 Peptidase M20A, amidohydrolase, predicted DB29_03860 62fde9daf74699a991e609c90d40c8c8 548 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 7 495 4.0E-192 T 14-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 DB29_03860 62fde9daf74699a991e609c90d40c8c8 548 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 45 495 1.6E-163 T 14-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 DB29_03493 fbb0a7aa940a365facdd8ce5339b6f8e 200 SUPERFAMILY SSF55174 3 200 3.27E-66 T 14-10-2018 DB29_03493 fbb0a7aa940a365facdd8ce5339b6f8e 200 Gene3D G3DSA:3.10.290.10 91 185 9.7E-73 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 DB29_03493 fbb0a7aa940a365facdd8ce5339b6f8e 200 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 200 2.0E-82 T 14-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 DB29_03493 fbb0a7aa940a365facdd8ce5339b6f8e 200 Pfam PF01479 S4 domain 93 139 2.6E-21 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB29_03493 fbb0a7aa940a365facdd8ce5339b6f8e 200 SMART SM00363 92 156 5.1E-19 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB29_03493 fbb0a7aa940a365facdd8ce5339b6f8e 200 Gene3D G3DSA:1.10.1050.10 6 200 9.7E-73 T 14-10-2018 DB29_03493 fbb0a7aa940a365facdd8ce5339b6f8e 200 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 91 2.1E-29 T 14-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 DB29_03493 fbb0a7aa940a365facdd8ce5339b6f8e 200 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 200 35.296 T 14-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 DB29_03493 fbb0a7aa940a365facdd8ce5339b6f8e 200 ProSitePatterns PS00632 Ribosomal protein S4 signature. 90 114 - T 14-10-2018 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB29_03493 fbb0a7aa940a365facdd8ce5339b6f8e 200 SMART SM01390 3 91 1.3E-47 T 14-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 DB29_01164 f104c5f2f750cfe33146053a51438e42 347 SUPERFAMILY SSF46785 267 345 1.86E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_01164 f104c5f2f750cfe33146053a51438e42 347 Pfam PF01022 Bacterial regulatory protein, arsR family 276 319 1.1E-10 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DB29_01164 f104c5f2f750cfe33146053a51438e42 347 SMART SM00418 269 343 7.9E-10 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DB29_01164 f104c5f2f750cfe33146053a51438e42 347 Gene3D G3DSA:1.10.10.10 250 347 7.3E-15 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_01164 f104c5f2f750cfe33146053a51438e42 347 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 303 318 5.3E-6 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DB29_01164 f104c5f2f750cfe33146053a51438e42 347 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 271 286 5.3E-6 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DB29_02151 43ee344c6e667acf5c686765a3183096 430 Gene3D G3DSA:1.10.3720.10 173 429 3.7E-67 T 14-10-2018 IPR035906 MetI-like superfamily DB29_02151 43ee344c6e667acf5c686765a3183096 430 SUPERFAMILY SSF160964 82 181 1.83E-9 T 14-10-2018 DB29_02151 43ee344c6e667acf5c686765a3183096 430 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 212 414 4.2E-28 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DB29_02151 43ee344c6e667acf5c686765a3183096 430 SUPERFAMILY SSF161098 177 415 8.11E-57 T 14-10-2018 IPR035906 MetI-like superfamily DB29_03485 ad4af0dae884b61e260e878a4bf5a88e 363 Pfam PF01817 Chorismate mutase type II 10 87 4.0E-17 T 14-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 DB29_03485 ad4af0dae884b61e260e878a4bf5a88e 363 Gene3D G3DSA:3.20.20.70 93 356 8.0E-100 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DB29_03485 ad4af0dae884b61e260e878a4bf5a88e 363 SMART SM00830 10 89 3.3E-21 T 14-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 DB29_03485 ad4af0dae884b61e260e878a4bf5a88e 363 Pfam PF00793 DAHP synthetase I family 110 348 3.6E-82 T 14-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 DB29_03485 ad4af0dae884b61e260e878a4bf5a88e 363 Gene3D G3DSA:1.20.59.10 8 92 3.9E-26 T 14-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 DB29_03485 ad4af0dae884b61e260e878a4bf5a88e 363 TIGRFAM TIGR01361 DAHP_synth_Bsub: 3-deoxy-7-phosphoheptulonate synthase 95 350 3.8E-120 T 14-10-2018 IPR006268 Phospho-2-dehydro-3-deoxyheptonate aldolase, subtype 2 GO:0009073|GO:0016832 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 DB29_03485 ad4af0dae884b61e260e878a4bf5a88e 363 SUPERFAMILY SSF51569 32 351 1.47E-99 T 14-10-2018 DB29_03485 ad4af0dae884b61e260e878a4bf5a88e 363 TIGRFAM TIGR01801 CM_A: chorismate mutase 1 102 9.5E-40 T 14-10-2018 IPR010954 Chorismate mutase, Firmicutes/Deinococcus KEGG: 00400+2.5.1.54+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6164|MetaCyc: PWY-6627|MetaCyc: PWY-7626 DB29_02908 38adbcbfa39b92784cede40dfd4ba19a 497 Pfam PF16369 C-terminal of Glycosyl hydrolases family 43 387 490 5.4E-35 T 14-10-2018 IPR032291 Extracellular endo-alpha-(1->5)-L-arabinanase, C-terminal DB29_02908 38adbcbfa39b92784cede40dfd4ba19a 497 Gene3D G3DSA:2.40.128.10 399 497 4.1E-35 T 14-10-2018 DB29_02908 38adbcbfa39b92784cede40dfd4ba19a 497 Gene3D G3DSA:2.115.10.20 56 386 4.9E-110 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily DB29_02908 38adbcbfa39b92784cede40dfd4ba19a 497 SUPERFAMILY SSF75005 42 385 1.27E-62 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily DB29_02908 38adbcbfa39b92784cede40dfd4ba19a 497 Pfam PF04616 Glycosyl hydrolases family 43 50 296 8.1E-29 T 14-10-2018 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 DB29_00810 6ab255daf4f719a9997118531131c42f 316 Gene3D G3DSA:3.30.1780.10 7 314 2.9E-78 T 14-10-2018 IPR023401 Ornithine cyclodeaminase, N-terminal Reactome: R-HSA-71064 DB29_00810 6ab255daf4f719a9997118531131c42f 316 PIRSF PIRSF001439 3 316 1.3E-62 T 14-10-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 DB29_00810 6ab255daf4f719a9997118531131c42f 316 Gene3D G3DSA:3.40.50.720 126 296 2.9E-78 T 14-10-2018 DB29_00810 6ab255daf4f719a9997118531131c42f 316 Pfam PF02423 Ornithine cyclodeaminase/mu-crystallin family 5 313 5.4E-76 T 14-10-2018 IPR003462 Ornithine cyclodeaminase/mu-crystallin Reactome: R-HSA-71064 DB29_00810 6ab255daf4f719a9997118531131c42f 316 SUPERFAMILY SSF51735 4 314 1.1E-79 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_00125 a5c6bef65b58e35860a9d8560a0dd196 472 Gene3D G3DSA:3.30.565.10 302 469 3.3E-39 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB29_00125 a5c6bef65b58e35860a9d8560a0dd196 472 PRINTS PR00344 Bacterial sensor protein C-terminal signature 450 463 5.5E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB29_00125 a5c6bef65b58e35860a9d8560a0dd196 472 PRINTS PR00344 Bacterial sensor protein C-terminal signature 390 404 5.5E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB29_00125 a5c6bef65b58e35860a9d8560a0dd196 472 PRINTS PR00344 Bacterial sensor protein C-terminal signature 408 418 5.5E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB29_00125 a5c6bef65b58e35860a9d8560a0dd196 472 PRINTS PR00344 Bacterial sensor protein C-terminal signature 426 444 5.5E-17 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB29_00125 a5c6bef65b58e35860a9d8560a0dd196 472 Pfam PF00512 His Kinase A (phospho-acceptor) domain 235 294 3.3E-15 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DB29_00125 a5c6bef65b58e35860a9d8560a0dd196 472 SMART SM00388 234 297 1.1E-15 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DB29_00125 a5c6bef65b58e35860a9d8560a0dd196 472 SMART SM00387 341 466 3.3E-29 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DB29_00125 a5c6bef65b58e35860a9d8560a0dd196 472 SUPERFAMILY SSF158472 174 223 7.59E-5 T 14-10-2018 DB29_00125 a5c6bef65b58e35860a9d8560a0dd196 472 SUPERFAMILY SSF55874 286 466 1.83E-36 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB29_00125 a5c6bef65b58e35860a9d8560a0dd196 472 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 342 463 8.1E-22 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DB29_00125 a5c6bef65b58e35860a9d8560a0dd196 472 SUPERFAMILY SSF47384 226 296 4.12E-15 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DB29_00125 a5c6bef65b58e35860a9d8560a0dd196 472 Gene3D G3DSA:1.10.287.130 230 297 4.1E-17 T 14-10-2018 DB29_00125 a5c6bef65b58e35860a9d8560a0dd196 472 Gene3D G3DSA:1.20.1480.50 137 229 1.4E-5 T 14-10-2018 DB29_04321 20abda6980ff7e151aab37defc5ae9ef 241 SUPERFAMILY SSF56300 1 230 1.22E-57 T 14-10-2018 DB29_04321 20abda6980ff7e151aab37defc5ae9ef 241 Gene3D G3DSA:3.60.21.10 1 238 5.3E-61 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like DB29_04321 20abda6980ff7e151aab37defc5ae9ef 241 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 1 198 2.7E-25 T 14-10-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 DB29_04321 20abda6980ff7e151aab37defc5ae9ef 241 PIRSF PIRSF000883 1 236 6.2E-64 T 14-10-2018 IPR011152 Phosphoesterase MJ0912 DB29_01966 09d9df90611c4dd75bbe0380b598c276 354 SUPERFAMILY SSF53756 2 349 3.37E-95 T 14-10-2018 DB29_01966 09d9df90611c4dd75bbe0380b598c276 354 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 4 353 29.392 T 14-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DB29_01966 09d9df90611c4dd75bbe0380b598c276 354 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 4 141 6.4E-40 T 14-10-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DB29_01966 09d9df90611c4dd75bbe0380b598c276 354 Gene3D G3DSA:3.40.50.2000 178 339 1.1E-41 T 14-10-2018 DB29_01966 09d9df90611c4dd75bbe0380b598c276 354 Gene3D G3DSA:3.40.50.2000 1 177 2.9E-59 T 14-10-2018 DB29_01966 09d9df90611c4dd75bbe0380b598c276 354 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 187 345 5.0E-35 T 14-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 DB29_01966 09d9df90611c4dd75bbe0380b598c276 354 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 1 342 2.0E-77 T 14-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DB29_01289 7079f44441e57eabf7a862c626f717ad 359 Pfam PF07730 Histidine kinase 152 217 4.3E-12 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 DB29_01289 7079f44441e57eabf7a862c626f717ad 359 PRINTS PR00344 Bacterial sensor protein C-terminal signature 334 347 1.5E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB29_01289 7079f44441e57eabf7a862c626f717ad 359 PRINTS PR00344 Bacterial sensor protein C-terminal signature 291 305 1.5E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB29_01289 7079f44441e57eabf7a862c626f717ad 359 PRINTS PR00344 Bacterial sensor protein C-terminal signature 310 328 1.5E-8 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB29_01289 7079f44441e57eabf7a862c626f717ad 359 Gene3D G3DSA:3.30.450.20 6 126 1.2E-6 T 14-10-2018 DB29_01289 7079f44441e57eabf7a862c626f717ad 359 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 260 349 8.6E-13 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DB29_01289 7079f44441e57eabf7a862c626f717ad 359 PIRSF PIRSF037432 1 348 2.8E-177 T 14-10-2018 IPR017203 Signal transduction histidine kinase, NreB GO:0000155|GO:0004673|GO:0005506|GO:0005524|GO:0005737|GO:0018106 DB29_01289 7079f44441e57eabf7a862c626f717ad 359 SUPERFAMILY SSF55874 225 348 1.96E-23 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB29_01289 7079f44441e57eabf7a862c626f717ad 359 SUPERFAMILY SSF55785 22 138 5.71E-6 T 14-10-2018 IPR035965 PAS domain superfamily DB29_01289 7079f44441e57eabf7a862c626f717ad 359 Gene3D G3DSA:3.30.565.10 215 352 1.2E-30 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB29_01289 7079f44441e57eabf7a862c626f717ad 359 SMART SM00387 255 350 2.9E-15 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DB29_03841 698eeeac6273d4cf3e73eee6a1420233 259 Gene3D G3DSA:3.30.70.100 170 253 3.7E-16 T 14-10-2018 DB29_03841 698eeeac6273d4cf3e73eee6a1420233 259 Gene3D G3DSA:2.30.30.60 120 169 7.2E-21 T 14-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily DB29_03841 698eeeac6273d4cf3e73eee6a1420233 259 Pfam PF00924 Mechanosensitive ion channel 61 249 3.0E-44 T 14-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 DB29_03841 698eeeac6273d4cf3e73eee6a1420233 259 SUPERFAMILY SSF82689 168 252 3.14E-7 T 14-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 DB29_03841 698eeeac6273d4cf3e73eee6a1420233 259 SUPERFAMILY SSF50182 105 163 4.58E-15 T 14-10-2018 IPR010920 LSM domain superfamily DB29_03841 698eeeac6273d4cf3e73eee6a1420233 259 SUPERFAMILY SSF82861 18 103 9.02E-15 T 14-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 DB29_00588 552a9ccf3493d7f75df3241514b625d1 145 Pfam PF14184 Regulatory protein YrvL 14 137 1.3E-32 T 14-10-2018 IPR025912 Regulatory protein YrvL DB29_00588 552a9ccf3493d7f75df3241514b625d1 145 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 21 135 0.007 T 14-10-2018 DB29_03180 53f5e48094fa1e5713c423daf06845d7 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 130 138 2.1E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_03180 53f5e48094fa1e5713c423daf06845d7 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 77 88 2.1E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_03180 53f5e48094fa1e5713c423daf06845d7 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 2.1E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_03180 53f5e48094fa1e5713c423daf06845d7 251 SUPERFAMILY SSF51735 3 250 1.45E-69 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_03180 53f5e48094fa1e5713c423daf06845d7 251 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 DB29_03180 53f5e48094fa1e5713c423daf06845d7 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 6.9E-35 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_03180 53f5e48094fa1e5713c423daf06845d7 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 6.9E-35 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_03180 53f5e48094fa1e5713c423daf06845d7 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 6.9E-35 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_03180 53f5e48094fa1e5713c423daf06845d7 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 212 232 6.9E-35 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_03180 53f5e48094fa1e5713c423daf06845d7 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 6.9E-35 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_03180 53f5e48094fa1e5713c423daf06845d7 251 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 124 140 6.9E-35 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_03180 53f5e48094fa1e5713c423daf06845d7 251 Gene3D G3DSA:3.40.50.720 1 250 2.7E-73 T 14-10-2018 DB29_03180 53f5e48094fa1e5713c423daf06845d7 251 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 10 246 3.1E-61 T 14-10-2018 DB29_02028 2ff4c84e98afa7982d3341dbf361e6be 337 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 235 300 1.5E-20 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DB29_02028 2ff4c84e98afa7982d3341dbf361e6be 337 SUPERFAMILY SSF52540 5 255 3.0E-75 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_02028 2ff4c84e98afa7982d3341dbf361e6be 337 ProSitePatterns PS00211 ABC transporters family signature. 156 170 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB29_02028 2ff4c84e98afa7982d3341dbf361e6be 337 SMART SM00382 41 233 1.0E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_02028 2ff4c84e98afa7982d3341dbf361e6be 337 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 233 322 4.8E-29 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DB29_02028 2ff4c84e98afa7982d3341dbf361e6be 337 Gene3D G3DSA:3.40.50.300 3 335 1.6E-103 T 14-10-2018 DB29_02028 2ff4c84e98afa7982d3341dbf361e6be 337 Pfam PF00005 ABC transporter 33 183 3.1E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB29_04270 7dd8b0cd07ef5c75184d2c37b6e31986 457 ProSitePatterns PS00163 Fumarate lyases signature. 274 283 - T 14-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 DB29_04270 7dd8b0cd07ef5c75184d2c37b6e31986 457 SMART SM00998 362 441 8.7E-21 T 14-10-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 DB29_04270 7dd8b0cd07ef5c75184d2c37b6e31986 457 PRINTS PR00149 Fumarate lyase superfamily signature 274 290 1.0E-12 T 14-10-2018 IPR000362 Fumarate lyase family DB29_04270 7dd8b0cd07ef5c75184d2c37b6e31986 457 PRINTS PR00149 Fumarate lyase superfamily signature 144 162 1.0E-12 T 14-10-2018 IPR000362 Fumarate lyase family DB29_04270 7dd8b0cd07ef5c75184d2c37b6e31986 457 PRINTS PR00149 Fumarate lyase superfamily signature 229 256 1.0E-12 T 14-10-2018 IPR000362 Fumarate lyase family DB29_04270 7dd8b0cd07ef5c75184d2c37b6e31986 457 Gene3D G3DSA:1.10.40.30 361 448 6.7E-22 T 14-10-2018 DB29_04270 7dd8b0cd07ef5c75184d2c37b6e31986 457 Pfam PF10397 Adenylosuccinate lyase C-terminus 363 437 6.1E-14 T 14-10-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 DB29_04270 7dd8b0cd07ef5c75184d2c37b6e31986 457 Gene3D G3DSA:1.10.275.10 6 103 9.3E-24 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal DB29_04270 7dd8b0cd07ef5c75184d2c37b6e31986 457 SUPERFAMILY SSF48557 17 444 1.88E-89 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 DB29_04270 7dd8b0cd07ef5c75184d2c37b6e31986 457 PRINTS PR00145 Argininosuccinate lyase family signature 139 159 1.8E-8 T 14-10-2018 DB29_04270 7dd8b0cd07ef5c75184d2c37b6e31986 457 PRINTS PR00145 Argininosuccinate lyase family signature 274 290 1.8E-8 T 14-10-2018 DB29_04270 7dd8b0cd07ef5c75184d2c37b6e31986 457 PRINTS PR00145 Argininosuccinate lyase family signature 229 253 1.8E-8 T 14-10-2018 DB29_04270 7dd8b0cd07ef5c75184d2c37b6e31986 457 Pfam PF00206 Lyase 20 285 2.0E-29 T 14-10-2018 IPR022761 Fumarate lyase, N-terminal DB29_04270 7dd8b0cd07ef5c75184d2c37b6e31986 457 Gene3D G3DSA:1.20.200.10 104 358 4.3E-56 T 14-10-2018 DB29_02408 ab34efed9b4ec97d0a42fb2c6bb2563f 139 Pfam PF04634 Protein of unknown function, DUF600 5 137 5.9E-37 T 14-10-2018 IPR006728 Protein of unknown function DUF600 DB29_02408 ab34efed9b4ec97d0a42fb2c6bb2563f 139 Gene3D G3DSA:3.30.500.20 1 117 9.5E-42 T 14-10-2018 DB29_02408 ab34efed9b4ec97d0a42fb2c6bb2563f 139 SUPERFAMILY SSF160424 1 135 6.67E-41 T 14-10-2018 IPR036170 Probable antitoxin YezG superfamily DB29_01700 4f838dc275c1ce8718cb05c2649b3175 272 SUPERFAMILY SSF161098 5 272 4.11E-63 T 14-10-2018 IPR035906 MetI-like superfamily DB29_01700 4f838dc275c1ce8718cb05c2649b3175 272 Gene3D G3DSA:1.10.3720.10 4 260 1.6E-57 T 14-10-2018 IPR035906 MetI-like superfamily DB29_01700 4f838dc275c1ce8718cb05c2649b3175 272 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 83 258 3.6E-15 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DB29_02889 9d88cf9986345f516e8f6a8e6a9e1cd0 336 SMART SM00420 20 65 0.0073 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DB29_02889 9d88cf9986345f516e8f6a8e6a9e1cd0 336 PIRSF PIRSF016838 87 335 8.6E-15 T 14-10-2018 IPR028349 Protein PafC DB29_02889 9d88cf9986345f516e8f6a8e6a9e1cd0 336 PIRSF PIRSF016838 14 67 2.7E-5 T 14-10-2018 IPR028349 Protein PafC DB29_02889 9d88cf9986345f516e8f6a8e6a9e1cd0 336 Gene3D G3DSA:1.10.10.10 6 78 6.7E-14 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_02889 9d88cf9986345f516e8f6a8e6a9e1cd0 336 Pfam PF13280 WYL domain 156 328 2.7E-35 T 14-10-2018 IPR026881 WYL domain DB29_02889 9d88cf9986345f516e8f6a8e6a9e1cd0 336 SUPERFAMILY SSF46785 17 72 2.04E-11 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_02889 9d88cf9986345f516e8f6a8e6a9e1cd0 336 Pfam PF08279 HTH domain 20 74 2.5E-16 T 14-10-2018 IPR013196 Helix-turn-helix, type 11 DB29_02889 9d88cf9986345f516e8f6a8e6a9e1cd0 336 ProSitePatterns PS00894 DeoR-type HTH domain signature. 20 54 - T 14-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 DB29_01760 eb07ea40270f4f2c8f93e1eff0781dae 330 SUPERFAMILY SSF53659 3 329 1.92E-105 T 14-10-2018 DB29_01760 eb07ea40270f4f2c8f93e1eff0781dae 330 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 32 322 2.5E-105 T 14-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 DB29_01760 eb07ea40270f4f2c8f93e1eff0781dae 330 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 5 328 2.8E-107 T 14-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 DB29_01760 eb07ea40270f4f2c8f93e1eff0781dae 330 Gene3D G3DSA:3.40.718.10 1 330 1.8E-134 T 14-10-2018 DB29_00963 7a0170d5eda91e100eb9408552dad6de 376 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 9 70 2.2E-4 T 14-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 DB29_00963 7a0170d5eda91e100eb9408552dad6de 376 Gene3D G3DSA:3.40.50.20 1 109 7.0E-42 T 14-10-2018 DB29_00963 7a0170d5eda91e100eb9408552dad6de 376 Gene3D G3DSA:3.30.470.20 185 371 5.6E-79 T 14-10-2018 DB29_00963 7a0170d5eda91e100eb9408552dad6de 376 SUPERFAMILY SSF51246 309 371 1.65E-14 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 DB29_00963 7a0170d5eda91e100eb9408552dad6de 376 SUPERFAMILY SSF56059 105 304 3.01E-65 T 14-10-2018 DB29_00963 7a0170d5eda91e100eb9408552dad6de 376 SUPERFAMILY SSF52440 5 88 4.75E-26 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily DB29_00963 7a0170d5eda91e100eb9408552dad6de 376 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 9 359 43.796 T 14-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 DB29_00963 7a0170d5eda91e100eb9408552dad6de 376 Pfam PF02222 ATP-grasp domain 115 284 6.9E-58 T 14-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type DB29_00963 7a0170d5eda91e100eb9408552dad6de 376 Gene3D G3DSA:3.30.1490.20 110 184 7.5E-25 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 DB29_00963 7a0170d5eda91e100eb9408552dad6de 376 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 9 362 4.2E-129 T 14-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 DB29_00726 8381967f298155d8b83255660717425b 552 Gene3D G3DSA:3.30.9.10 102 345 3.2E-137 T 14-10-2018 DB29_00726 8381967f298155d8b83255660717425b 552 Pfam PF01266 FAD dependent oxidoreductase 21 352 6.8E-54 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 DB29_00726 8381967f298155d8b83255660717425b 552 Gene3D G3DSA:3.50.50.60 18 381 3.2E-137 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB29_00726 8381967f298155d8b83255660717425b 552 SUPERFAMILY SSF54373 249 344 1.12E-11 T 14-10-2018 DB29_00726 8381967f298155d8b83255660717425b 552 SUPERFAMILY SSF51905 11 238 6.84E-36 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB29_00726 8381967f298155d8b83255660717425b 552 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 25 42 - T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 DB29_00726 8381967f298155d8b83255660717425b 552 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 405 532 6.5E-26 T 14-10-2018 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 DB29_00726 8381967f298155d8b83255660717425b 552 Gene3D G3DSA:1.10.8.870 422 552 1.4E-37 T 14-10-2018 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 DB29_00726 8381967f298155d8b83255660717425b 552 ProSitePatterns PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2. 373 383 - T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 DB29_00726 8381967f298155d8b83255660717425b 552 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 94 106 1.2E-31 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 DB29_00726 8381967f298155d8b83255660717425b 552 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 20 32 1.2E-31 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 DB29_00726 8381967f298155d8b83255660717425b 552 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 33 43 1.2E-31 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 DB29_00726 8381967f298155d8b83255660717425b 552 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 368 380 1.2E-31 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 DB29_00726 8381967f298155d8b83255660717425b 552 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 49 61 1.2E-31 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 DB29_00726 8381967f298155d8b83255660717425b 552 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 338 344 1.2E-31 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 DB29_03199 aec7aa65e8fdada2b21a1533df512c8f 150 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 4 20 2.7E-10 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 DB29_03199 aec7aa65e8fdada2b21a1533df512c8f 150 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 20 31 2.7E-10 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 DB29_03199 aec7aa65e8fdada2b21a1533df512c8f 150 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 31 50 2.7E-10 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 DB29_03199 aec7aa65e8fdada2b21a1533df512c8f 150 Gene3D G3DSA:1.10.10.10 4 51 1.5E-13 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_03199 aec7aa65e8fdada2b21a1533df512c8f 150 Pfam PF13412 Winged helix-turn-helix DNA-binding 4 49 4.7E-13 T 14-10-2018 DB29_03199 aec7aa65e8fdada2b21a1533df512c8f 150 SMART SM00344 4 109 1.3E-21 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 DB29_03199 aec7aa65e8fdada2b21a1533df512c8f 150 Pfam PF01037 Lrp/AsnC ligand binding domain 74 140 2.0E-10 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain DB29_03199 aec7aa65e8fdada2b21a1533df512c8f 150 SUPERFAMILY SSF54909 63 142 1.1E-12 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel DB29_03199 aec7aa65e8fdada2b21a1533df512c8f 150 SUPERFAMILY SSF46785 3 63 1.8E-11 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_03199 aec7aa65e8fdada2b21a1533df512c8f 150 Gene3D G3DSA:3.30.70.920 56 147 3.5E-15 T 14-10-2018 DB29_03270 18398283e7d68b577fbf76311e3b3baa 432 Gene3D G3DSA:3.30.70.360 177 343 1.7E-153 T 14-10-2018 DB29_03270 18398283e7d68b577fbf76311e3b3baa 432 SUPERFAMILY SSF53187 2 429 9.14E-52 T 14-10-2018 DB29_03270 18398283e7d68b577fbf76311e3b3baa 432 Pfam PF07687 Peptidase dimerisation domain 175 331 2.5E-16 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain DB29_03270 18398283e7d68b577fbf76311e3b3baa 432 Gene3D G3DSA:3.40.630.10 7 415 1.7E-153 T 14-10-2018 DB29_03270 18398283e7d68b577fbf76311e3b3baa 432 Pfam PF01546 Peptidase family M20/M25/M40 63 427 1.8E-29 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 DB29_00718 236804cbb7633fed879423101ec83d21 237 Pfam PF00392 Bacterial regulatory proteins, gntR family 6 67 9.7E-20 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DB29_00718 236804cbb7633fed879423101ec83d21 237 SMART SM00866 89 228 3.1E-36 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 DB29_00718 236804cbb7633fed879423101ec83d21 237 Gene3D G3DSA:1.10.10.10 1 71 5.7E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_00718 236804cbb7633fed879423101ec83d21 237 Pfam PF07702 UTRA domain 90 228 9.3E-37 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 DB29_00718 236804cbb7633fed879423101ec83d21 237 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 27 41 3.4E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DB29_00718 236804cbb7633fed879423101ec83d21 237 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 41 57 3.4E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DB29_00718 236804cbb7633fed879423101ec83d21 237 SMART SM00345 8 67 8.6E-19 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DB29_00718 236804cbb7633fed879423101ec83d21 237 SUPERFAMILY SSF64288 74 233 2.51E-45 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily DB29_00718 236804cbb7633fed879423101ec83d21 237 SUPERFAMILY SSF46785 4 76 2.73E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_00718 236804cbb7633fed879423101ec83d21 237 Gene3D G3DSA:3.40.1410.10 72 232 2.1E-37 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily DB29_00718 236804cbb7633fed879423101ec83d21 237 TIGRFAM TIGR02404 trehalos_R_Bsub: trehalose operon repressor 4 235 2.9E-93 T 14-10-2018 IPR012770 Trehalose operon transcriptional repressor DB29_00453 4735ed3aa69db58eccfeae9554f80975 311 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 10 295 25.215 T 14-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 DB29_00453 4735ed3aa69db58eccfeae9554f80975 311 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 38 283 2.9E-65 T 14-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 DB29_00453 4735ed3aa69db58eccfeae9554f80975 311 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 64 280 3.9E-48 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial DB29_00453 4735ed3aa69db58eccfeae9554f80975 311 Pfam PF07549 SecD/SecF GG Motif 32 58 1.7E-8 T 14-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site DB29_00453 4735ed3aa69db58eccfeae9554f80975 311 SUPERFAMILY SSF82866 104 297 1.57E-35 T 14-10-2018 DB29_00453 4735ed3aa69db58eccfeae9554f80975 311 Gene3D G3DSA:1.20.1640.10 102 306 2.9E-10 T 14-10-2018 DB29_00453 4735ed3aa69db58eccfeae9554f80975 311 PRINTS PR01755 Bacterial translocase SecF protein signature 37 52 2.8E-24 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial DB29_00453 4735ed3aa69db58eccfeae9554f80975 311 PRINTS PR01755 Bacterial translocase SecF protein signature 196 214 2.8E-24 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial DB29_00453 4735ed3aa69db58eccfeae9554f80975 311 PRINTS PR01755 Bacterial translocase SecF protein signature 148 162 2.8E-24 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial DB29_00453 4735ed3aa69db58eccfeae9554f80975 311 PRINTS PR01755 Bacterial translocase SecF protein signature 232 247 2.8E-24 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial DB29_00453 4735ed3aa69db58eccfeae9554f80975 311 Pfam PF02355 Protein export membrane protein 115 292 3.9E-59 T 14-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial DB29_02931 46fdf3161a614ccc777770998cd37723 159 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 2 146 2.0E-36 T 14-10-2018 IPR002178 PTS EIIA type-2 domain DB29_02931 46fdf3161a614ccc777770998cd37723 159 SUPERFAMILY SSF55804 2 147 9.81E-38 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 DB29_02931 46fdf3161a614ccc777770998cd37723 159 Gene3D G3DSA:3.40.930.10 1 151 1.0E-47 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 DB29_00758 92d0e89029c81f6a6ef7612d8b9e1cc4 340 Gene3D G3DSA:3.40.190.10 125 335 2.0E-133 T 14-10-2018 DB29_00758 92d0e89029c81f6a6ef7612d8b9e1cc4 340 SUPERFAMILY SSF53850 33 338 6.21E-86 T 14-10-2018 DB29_00758 92d0e89029c81f6a6ef7612d8b9e1cc4 340 Pfam PF13531 Bacterial extracellular solute-binding protein 49 290 4.8E-43 T 14-10-2018 DB29_00758 92d0e89029c81f6a6ef7612d8b9e1cc4 340 Gene3D G3DSA:3.40.190.10 38 305 2.0E-133 T 14-10-2018 DB29_00758 92d0e89029c81f6a6ef7612d8b9e1cc4 340 TIGRFAM TIGR00971 3a0106s03: sulfate ABC transporter, sulfate-binding protein 32 336 2.5E-142 T 14-10-2018 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 DB29_00758 92d0e89029c81f6a6ef7612d8b9e1cc4 340 ProSitePatterns PS00757 Prokaryotic sulfate-binding proteins signature 2. 156 164 - T 14-10-2018 IPR034408 Sulphate/thiosulphate-binding site GO:1901681 DB29_02833 000477a64165320cd9b479a93452192e 338 SUPERFAMILY SSF55347 128 302 1.14E-28 T 14-10-2018 DB29_02833 000477a64165320cd9b479a93452192e 338 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 2 122 6.0E-26 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 DB29_02833 000477a64165320cd9b479a93452192e 338 SUPERFAMILY SSF51735 2 150 3.69E-45 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_02833 000477a64165320cd9b479a93452192e 338 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 134 229 6.8E-12 T 14-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 DB29_02833 000477a64165320cd9b479a93452192e 338 Gene3D G3DSA:3.30.360.10 123 318 9.5E-85 T 14-10-2018 DB29_02833 000477a64165320cd9b479a93452192e 338 Gene3D G3DSA:3.40.50.720 2 304 9.5E-85 T 14-10-2018 DB29_01475 cb92aa716fa2876b55256730a16f0583 555 Gene3D G3DSA:2.60.120.200 327 538 1.6E-56 T 14-10-2018 DB29_01475 cb92aa716fa2876b55256730a16f0583 555 SUPERFAMILY SSF49899 326 531 1.5E-63 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily DB29_01475 cb92aa716fa2876b55256730a16f0583 555 Pfam PF07081 Protein of unknown function (DUF1349) 377 531 1.2E-7 T 14-10-2018 IPR009784 Protein of unknown function DUF1349 DB29_01475 cb92aa716fa2876b55256730a16f0583 555 Gene3D G3DSA:2.115.10.20 1 326 1.2E-107 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily DB29_01475 cb92aa716fa2876b55256730a16f0583 555 SUPERFAMILY SSF75005 2 321 1.36E-106 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily DB29_01475 cb92aa716fa2876b55256730a16f0583 555 Pfam PF04616 Glycosyl hydrolases family 43 2 301 1.3E-107 T 14-10-2018 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 DB29_00159 93c69fad48d24b98cb68547a1eaa4e5b 242 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 99 113 - T 14-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 DB29_00159 93c69fad48d24b98cb68547a1eaa4e5b 242 Gene3D G3DSA:3.10.290.10 1 59 1.0E-22 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 DB29_00159 93c69fad48d24b98cb68547a1eaa4e5b 242 SUPERFAMILY SSF55120 47 235 7.91E-47 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 DB29_00159 93c69fad48d24b98cb68547a1eaa4e5b 242 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 67 226 1.3E-52 T 14-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 DB29_00159 93c69fad48d24b98cb68547a1eaa4e5b 242 Gene3D G3DSA:3.30.70.1560 123 215 4.5E-59 T 14-10-2018 DB29_00159 93c69fad48d24b98cb68547a1eaa4e5b 242 Gene3D G3DSA:3.30.70.580 65 223 4.5E-59 T 14-10-2018 DB29_00159 93c69fad48d24b98cb68547a1eaa4e5b 242 SMART SM00363 2 60 3.4E-14 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB29_00159 93c69fad48d24b98cb68547a1eaa4e5b 242 Pfam PF01479 S4 domain 2 45 1.1E-13 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB29_00159 93c69fad48d24b98cb68547a1eaa4e5b 242 SUPERFAMILY SSF55174 2 68 5.1E-16 T 14-10-2018 DB29_00159 93c69fad48d24b98cb68547a1eaa4e5b 242 Pfam PF00849 RNA pseudouridylate synthase 63 196 4.3E-25 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 DB29_00368 4d4be41aecfbbb7248e49d02feaae419 98 TIGRFAM TIGR00253 RNA_bind_YhbY: putative RNA-binding protein, YhbY family 2 96 4.5E-39 T 14-10-2018 IPR017924 RNA-binding protein YhbY GO:0003723 DB29_00368 4d4be41aecfbbb7248e49d02feaae419 98 Gene3D G3DSA:3.30.110.60 1 98 1.2E-36 T 14-10-2018 IPR035920 YhbY-like superfamily DB29_00368 4d4be41aecfbbb7248e49d02feaae419 98 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 8 96 8.0E-46 T 14-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 DB29_00368 4d4be41aecfbbb7248e49d02feaae419 98 Pfam PF01985 CRS1 / YhbY (CRM) domain 2 85 1.2E-21 T 14-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 DB29_00368 4d4be41aecfbbb7248e49d02feaae419 98 SMART SM01103 2 85 5.6E-40 T 14-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 DB29_00368 4d4be41aecfbbb7248e49d02feaae419 98 SUPERFAMILY SSF75471 1 94 3.79E-31 T 14-10-2018 IPR035920 YhbY-like superfamily DB29_00083 996f0ef58255cd7faaf456419413ab75 369 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 2 360 61.432 T 14-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 DB29_00083 996f0ef58255cd7faaf456419413ab75 369 Gene3D G3DSA:3.40.640.10 43 268 3.1E-115 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DB29_00083 996f0ef58255cd7faaf456419413ab75 369 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 220 229 - T 14-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 DB29_00083 996f0ef58255cd7faaf456419413ab75 369 SUPERFAMILY SSF53383 5 351 1.69E-75 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DB29_00083 996f0ef58255cd7faaf456419413ab75 369 Pfam PF00155 Aminotransferase class I and II 30 354 2.9E-52 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 DB29_00083 996f0ef58255cd7faaf456419413ab75 369 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 5 356 1.4E-105 T 14-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 DB29_00083 996f0ef58255cd7faaf456419413ab75 369 Gene3D G3DSA:3.90.1150.10 21 354 3.1E-115 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DB29_01469 a48442ba59c08663ae0339fa550025a9 368 SUPERFAMILY SSF56796 2 361 4.71E-88 T 14-10-2018 DB29_01469 a48442ba59c08663ae0339fa550025a9 368 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 152 180 - T 14-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 DB29_01469 a48442ba59c08663ae0339fa550025a9 368 Gene3D G3DSA:3.40.50.1970 3 161 1.3E-44 T 14-10-2018 DB29_01469 a48442ba59c08663ae0339fa550025a9 368 PIRSF PIRSF000112 1 363 5.4E-98 T 14-10-2018 IPR016205 Glycerol dehydrogenase GO:0016614|GO:0046872|GO:0055114 KEGG: 00564+1.1.1.261|MetaCyc: PWY-6349 DB29_01469 a48442ba59c08663ae0339fa550025a9 368 Gene3D G3DSA:1.20.1090.10 162 367 2.6E-70 T 14-10-2018 DB29_01469 a48442ba59c08663ae0339fa550025a9 368 Pfam PF00465 Iron-containing alcohol dehydrogenase 9 350 7.2E-68 T 14-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 DB29_02042 4b4461c79b6655c419a87d5e94cdefca 463 SUPERFAMILY SSF55785 5 120 4.57E-11 T 14-10-2018 IPR035965 PAS domain superfamily DB29_02042 4b4461c79b6655c419a87d5e94cdefca 463 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 16 127 1.3E-6 T 14-10-2018 IPR000014 PAS domain DB29_02042 4b4461c79b6655c419a87d5e94cdefca 463 SUPERFAMILY SSF46689 360 460 4.93E-15 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DB29_02042 4b4461c79b6655c419a87d5e94cdefca 463 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 172 185 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 DB29_02042 4b4461c79b6655c419a87d5e94cdefca 463 Gene3D G3DSA:1.10.8.60 318 385 1.3E-20 T 14-10-2018 DB29_02042 4b4461c79b6655c419a87d5e94cdefca 463 SUPERFAMILY SSF52540 147 388 3.55E-65 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_02042 4b4461c79b6655c419a87d5e94cdefca 463 Pfam PF00158 Sigma-54 interaction domain 148 313 2.6E-64 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 DB29_02042 4b4461c79b6655c419a87d5e94cdefca 463 Pfam PF08448 PAS fold 22 127 2.2E-6 T 14-10-2018 IPR013656 PAS fold-4 DB29_02042 4b4461c79b6655c419a87d5e94cdefca 463 SMART SM00382 168 310 3.4E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_02042 4b4461c79b6655c419a87d5e94cdefca 463 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 233 248 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 DB29_02042 4b4461c79b6655c419a87d5e94cdefca 463 Gene3D G3DSA:3.40.50.300 133 317 1.7E-63 T 14-10-2018 DB29_02042 4b4461c79b6655c419a87d5e94cdefca 463 Gene3D G3DSA:3.30.450.20 4 125 4.3E-12 T 14-10-2018 DB29_02042 4b4461c79b6655c419a87d5e94cdefca 463 Gene3D G3DSA:1.10.10.60 387 463 5.2E-16 T 14-10-2018 DB29_02042 4b4461c79b6655c419a87d5e94cdefca 463 Pfam PF02954 Bacterial regulatory protein, Fis family 418 458 1.5E-12 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DB29_02042 4b4461c79b6655c419a87d5e94cdefca 463 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 441 461 6.0E-8 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DB29_02042 4b4461c79b6655c419a87d5e94cdefca 463 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 424 441 6.0E-8 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DB29_01887 ce3b563d688f734156f092007792c432 178 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 3.3E-77 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 DB29_01887 ce3b563d688f734156f092007792c432 178 Gene3D G3DSA:3.90.930.12 2 82 1.9E-35 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB29_01887 ce3b563d688f734156f092007792c432 178 Pfam PF00347 Ribosomal protein L6 91 164 7.8E-19 T 14-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB29_01887 ce3b563d688f734156f092007792c432 178 Pfam PF00347 Ribosomal protein L6 11 82 5.7E-25 T 14-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB29_01887 ce3b563d688f734156f092007792c432 178 Gene3D G3DSA:3.90.930.12 83 178 1.0E-38 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB29_01887 ce3b563d688f734156f092007792c432 178 PIRSF PIRSF002162 1 177 2.9E-47 T 14-10-2018 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB29_01887 ce3b563d688f734156f092007792c432 178 PRINTS PR00059 Ribosomal protein L6 signature 71 96 1.1E-33 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 DB29_01887 ce3b563d688f734156f092007792c432 178 PRINTS PR00059 Ribosomal protein L6 signature 141 162 1.1E-33 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 DB29_01887 ce3b563d688f734156f092007792c432 178 PRINTS PR00059 Ribosomal protein L6 signature 99 115 1.1E-33 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 DB29_01887 ce3b563d688f734156f092007792c432 178 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 38.853 T 14-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 DB29_01887 ce3b563d688f734156f092007792c432 178 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 14-10-2018 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 DB29_01887 ce3b563d688f734156f092007792c432 178 SUPERFAMILY SSF56053 1 82 3.7E-30 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB29_01887 ce3b563d688f734156f092007792c432 178 SUPERFAMILY SSF56053 83 177 3.45E-34 T 14-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB29_01414 ba48648b9160e06ca34b527757a61d73 202 Pfam PF01583 Adenylylsulphate kinase 27 181 9.1E-75 T 14-10-2018 DB29_01414 ba48648b9160e06ca34b527757a61d73 202 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 10 192 6.7E-88 T 14-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 DB29_01414 ba48648b9160e06ca34b527757a61d73 202 SUPERFAMILY SSF52540 24 196 8.73E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_01414 ba48648b9160e06ca34b527757a61d73 202 Hamap MF_00065 Adenylyl-sulfate kinase [cysC]. 26 198 39.576 T 14-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 DB29_01414 ba48648b9160e06ca34b527757a61d73 202 Gene3D G3DSA:3.40.50.300 5 202 2.2E-86 T 14-10-2018 DB29_04112 f313009c3842ed975e1b5f82434dcbfe 374 SUPERFAMILY SSF56672 11 252 2.82E-90 T 14-10-2018 DB29_04112 f313009c3842ed975e1b5f82434dcbfe 374 SUPERFAMILY SSF100879 257 357 4.08E-26 T 14-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 DB29_04112 f313009c3842ed975e1b5f82434dcbfe 374 Pfam PF00817 impB/mucB/samB family 23 173 5.7E-48 T 14-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 DB29_04112 f313009c3842ed975e1b5f82434dcbfe 374 Gene3D G3DSA:1.10.150.20 184 247 1.8E-17 T 14-10-2018 DB29_04112 f313009c3842ed975e1b5f82434dcbfe 374 Pfam PF11799 impB/mucB/samB family C-terminal domain 256 361 1.8E-21 T 14-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 DB29_04112 f313009c3842ed975e1b5f82434dcbfe 374 Pfam PF11798 IMS family HHH motif 189 216 1.2E-6 T 14-10-2018 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 DB29_04112 f313009c3842ed975e1b5f82434dcbfe 374 Gene3D G3DSA:3.30.70.270 91 183 5.5E-31 T 14-10-2018 DB29_04112 f313009c3842ed975e1b5f82434dcbfe 374 Gene3D G3DSA:2.30.40.20 28 90 1.9E-25 T 14-10-2018 DB29_04112 f313009c3842ed975e1b5f82434dcbfe 374 Gene3D G3DSA:3.30.1490.100 259 365 4.0E-26 T 14-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 DB29_04112 f313009c3842ed975e1b5f82434dcbfe 374 Hamap MF_01113 DNA polymerase IV [dinB]. 17 369 36.82 T 14-10-2018 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 DB29_02737 d680eca071788193f28ef2092c5ec0fd 269 Gene3D G3DSA:1.10.10.10 1 102 9.6E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_02737 d680eca071788193f28ef2092c5ec0fd 269 Pfam PF11495 Archaeal transcriptional regulator TrmB 110 223 8.6E-6 T 14-10-2018 IPR021586 Transcription regulator TrmB, C-terminal DB29_02737 d680eca071788193f28ef2092c5ec0fd 269 SUPERFAMILY SSF46785 8 114 3.2E-8 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_02737 d680eca071788193f28ef2092c5ec0fd 269 Pfam PF01978 Sugar-specific transcriptional regulator TrmB 9 75 3.6E-22 T 14-10-2018 IPR002831 Transcription regulator TrmB, N-terminal DB29_02559 c94026b88c6a9f6a42d7db78cee7fe46 330 Gene3D G3DSA:3.40.50.300 5 329 4.8E-104 T 14-10-2018 DB29_02559 c94026b88c6a9f6a42d7db78cee7fe46 330 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 235 321 1.5E-29 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DB29_02559 c94026b88c6a9f6a42d7db78cee7fe46 330 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 237 301 2.2E-20 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DB29_02559 c94026b88c6a9f6a42d7db78cee7fe46 330 ProSitePatterns PS00211 ABC transporters family signature. 158 172 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB29_02559 c94026b88c6a9f6a42d7db78cee7fe46 330 SMART SM00382 36 235 1.9E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_02559 c94026b88c6a9f6a42d7db78cee7fe46 330 SUPERFAMILY SSF52540 36 306 2.84E-71 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_02559 c94026b88c6a9f6a42d7db78cee7fe46 330 Pfam PF00005 ABC transporter 28 185 1.2E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB29_00422 f0e59bf1d75939759e3f61ad77938f66 142 SMART SM00732 1 103 2.9E-35 T 14-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 DB29_00422 f0e59bf1d75939759e3f61ad77938f66 142 SUPERFAMILY SSF53098 2 137 7.74E-45 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily DB29_00422 f0e59bf1d75939759e3f61ad77938f66 142 Pfam PF03652 Holliday junction resolvase 2 135 1.1E-45 T 14-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 DB29_00422 f0e59bf1d75939759e3f61ad77938f66 142 Gene3D G3DSA:3.30.420.140 1 141 4.4E-51 T 14-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 DB29_00422 f0e59bf1d75939759e3f61ad77938f66 142 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 4 135 2.5E-48 T 14-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 DB29_00422 f0e59bf1d75939759e3f61ad77938f66 142 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 1 138 26.499 T 14-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 DB29_03654 3f0b0601d8493baa6ebda381744c461b 96 SUPERFAMILY SSF89447 1 51 1.1E-14 T 14-10-2018 IPR037914 SpoVT-AbrB domain superfamily DB29_03654 3f0b0601d8493baa6ebda381744c461b 96 Gene3D G3DSA:2.10.260.10 1 54 1.1E-23 T 14-10-2018 DB29_03654 3f0b0601d8493baa6ebda381744c461b 96 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 9 50 3.5E-8 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 DB29_03654 3f0b0601d8493baa6ebda381744c461b 96 SMART SM00966 8 51 3.7E-8 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 DB29_03804 ada648473717bc3e3d701e3f7d93fb42 295 SUPERFAMILY SSF48576 6 276 2.09E-83 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily DB29_03804 ada648473717bc3e3d701e3f7d93fb42 295 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 214 226 - T 14-10-2018 IPR033749 Polyprenyl synthetase, conserved site DB29_03804 ada648473717bc3e3d701e3f7d93fb42 295 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 82 98 - T 14-10-2018 IPR033749 Polyprenyl synthetase, conserved site DB29_03804 ada648473717bc3e3d701e3f7d93fb42 295 Gene3D G3DSA:1.10.600.10 2 295 3.3E-97 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily DB29_03804 ada648473717bc3e3d701e3f7d93fb42 295 Pfam PF00348 Polyprenyl synthetase 32 268 3.8E-58 T 14-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 DB29_03686 4e333149945db5a72ba3f336133e52e6 261 SUPERFAMILY SSF53474 21 248 1.34E-33 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DB29_03686 4e333149945db5a72ba3f336133e52e6 261 Pfam PF00326 Prolyl oligopeptidase family 92 238 8.8E-14 T 14-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 DB29_03686 4e333149945db5a72ba3f336133e52e6 261 Gene3D G3DSA:3.40.50.1820 2 252 1.6E-52 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DB29_04201 cc1434eeca3290ee6588235bf057153c 210 Gene3D G3DSA:1.10.260.40 6 74 1.1E-5 T 14-10-2018 DB29_04201 cc1434eeca3290ee6588235bf057153c 210 SUPERFAMILY SSF47413 12 71 1.49E-5 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DB29_04180 7cf8e40890e1c8b1add80c14975c9043 702 Pfam PF09382 RQC domain 405 513 1.3E-33 T 14-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 DB29_04180 7cf8e40890e1c8b1add80c14975c9043 702 Pfam PF00270 DEAD/DEAH box helicase 24 186 2.7E-23 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 DB29_04180 7cf8e40890e1c8b1add80c14975c9043 702 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 10 586 3.2E-227 T 14-10-2018 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 DB29_04180 7cf8e40890e1c8b1add80c14975c9043 702 SMART SM00490 247 327 1.5E-19 T 14-10-2018 IPR001650 Helicase, C-terminal DB29_04180 7cf8e40890e1c8b1add80c14975c9043 702 SMART SM00956 408 511 2.2E-45 T 14-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 DB29_04180 7cf8e40890e1c8b1add80c14975c9043 702 Gene3D G3DSA:3.40.50.300 2 205 2.5E-76 T 14-10-2018 DB29_04180 7cf8e40890e1c8b1add80c14975c9043 702 Gene3D G3DSA:1.10.10.10 337 518 5.7E-52 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_04180 7cf8e40890e1c8b1add80c14975c9043 702 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 12 460 1.8E-136 T 14-10-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 DB29_04180 7cf8e40890e1c8b1add80c14975c9043 702 SMART SM00341 514 596 1.2E-13 T 14-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 DB29_04180 7cf8e40890e1c8b1add80c14975c9043 702 SUPERFAMILY SSF52540 62 349 1.23E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_04180 7cf8e40890e1c8b1add80c14975c9043 702 Pfam PF14493 Helix-turn-helix domain 612 699 2.9E-18 T 14-10-2018 IPR029491 Helicase Helix-turn-helix domain Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 DB29_04180 7cf8e40890e1c8b1add80c14975c9043 702 Pfam PF16124 RecQ zinc-binding 339 401 1.4E-17 T 14-10-2018 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain DB29_04180 7cf8e40890e1c8b1add80c14975c9043 702 Gene3D G3DSA:1.10.150.80 519 596 8.0E-23 T 14-10-2018 DB29_04180 7cf8e40890e1c8b1add80c14975c9043 702 Gene3D G3DSA:3.40.50.300 206 336 1.2E-33 T 14-10-2018 DB29_04180 7cf8e40890e1c8b1add80c14975c9043 702 SMART SM00487 18 213 3.3E-30 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DB29_04180 7cf8e40890e1c8b1add80c14975c9043 702 Pfam PF00570 HRDC domain 521 585 2.9E-22 T 14-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 DB29_04180 7cf8e40890e1c8b1add80c14975c9043 702 SUPERFAMILY SSF47819 517 593 1.7E-23 T 14-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 DB29_04180 7cf8e40890e1c8b1add80c14975c9043 702 Pfam PF00271 Helicase conserved C-terminal domain 224 326 8.8E-15 T 14-10-2018 IPR001650 Helicase, C-terminal DB29_04180 7cf8e40890e1c8b1add80c14975c9043 702 SUPERFAMILY SSF46785 399 542 1.2E-36 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_04195 02a31c7090f6a012c1862936b5de80f6 479 Pfam PF00239 Resolvase, N terminal domain 4 151 7.5E-43 T 14-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 DB29_04195 02a31c7090f6a012c1862936b5de80f6 479 Pfam PF13408 Recombinase zinc beta ribbon domain 273 332 4.7E-12 T 14-10-2018 IPR025827 Recombinase zinc beta ribbon domain DB29_04195 02a31c7090f6a012c1862936b5de80f6 479 Gene3D G3DSA:1.10.10.2600 135 261 5.4E-16 T 14-10-2018 IPR038109 DNA-binding recombinase domain superfamily DB29_04195 02a31c7090f6a012c1862936b5de80f6 479 Pfam PF07508 Recombinase 172 253 8.9E-10 T 14-10-2018 IPR011109 DNA-binding recombinase domain GO:0000150|GO:0003677 DB29_04195 02a31c7090f6a012c1862936b5de80f6 479 ProSitePatterns PS00397 Site-specific recombinases active site. 6 14 - T 14-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 DB29_04195 02a31c7090f6a012c1862936b5de80f6 479 SUPERFAMILY SSF53041 1 151 1.09E-40 T 14-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 DB29_04195 02a31c7090f6a012c1862936b5de80f6 479 Gene3D G3DSA:3.40.50.1390 1 133 1.4E-47 T 14-10-2018 DB29_04195 02a31c7090f6a012c1862936b5de80f6 479 SMART SM00857 3 151 3.7E-62 T 14-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 DB29_02420 570167f80d642456c5fec89cd3ed838f 450 Gene3D G3DSA:3.90.1150.10 13 446 1.2E-147 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DB29_02420 570167f80d642456c5fec89cd3ed838f 450 Gene3D G3DSA:3.40.640.10 63 339 1.2E-147 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DB29_02420 570167f80d642456c5fec89cd3ed838f 450 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 248 287 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DB29_02420 570167f80d642456c5fec89cd3ed838f 450 SUPERFAMILY SSF53383 18 447 9.0E-118 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DB29_02420 570167f80d642456c5fec89cd3ed838f 450 Pfam PF00202 Aminotransferase class-III 28 446 1.1E-101 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DB29_02420 570167f80d642456c5fec89cd3ed838f 450 PIRSF PIRSF000521 6 449 1.9E-37 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DB29_01599 3e8a2cfc8bb84a3e9425400f4cf757e5 105 SUPERFAMILY SSF52794 2 100 3.14E-34 T 14-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 DB29_01599 3e8a2cfc8bb84a3e9425400f4cf757e5 105 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 5 96 4.0E-19 T 14-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 DB29_01599 3e8a2cfc8bb84a3e9425400f4cf757e5 105 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 4 88 2.5E-30 T 14-10-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202 DB29_01599 3e8a2cfc8bb84a3e9425400f4cf757e5 105 Gene3D G3DSA:3.40.50.2300 1 104 1.4E-37 T 14-10-2018 DB29_00774 1a80aac62d3d35055227a6845735b4f6 641 SUPERFAMILY SSF48208 12 418 1.02E-43 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 DB29_00774 1a80aac62d3d35055227a6845735b4f6 641 Pfam PF07944 Beta-L-arabinofuranosidase, GH127 9 552 4.4E-178 T 14-10-2018 IPR012878 Beta-L-arabinofuranosidase, GH127 DB29_00524 c9855eda3f1991269189c69aca8cc532 582 Gene3D G3DSA:1.20.1560.10 1 320 2.2E-92 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DB29_00524 c9855eda3f1991269189c69aca8cc532 582 ProSitePatterns PS00211 ABC transporters family signature. 473 487 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB29_00524 c9855eda3f1991269189c69aca8cc532 582 SUPERFAMILY SSF90123 5 317 1.44E-82 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DB29_00524 c9855eda3f1991269189c69aca8cc532 582 Pfam PF00005 ABC transporter 352 501 8.5E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB29_00524 c9855eda3f1991269189c69aca8cc532 582 SMART SM00382 361 553 7.7E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_00524 c9855eda3f1991269189c69aca8cc532 582 Pfam PF00664 ABC transporter transmembrane region 19 288 3.8E-53 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 DB29_00524 c9855eda3f1991269189c69aca8cc532 582 Gene3D G3DSA:3.40.50.300 325 580 2.8E-90 T 14-10-2018 DB29_00524 c9855eda3f1991269189c69aca8cc532 582 SUPERFAMILY SSF52540 327 571 2.11E-91 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_02965 a1e6ca48e020cd096575895f1b8dabd7 517 Gene3D G3DSA:3.30.420.40 271 429 2.4E-5 T 14-10-2018 DB29_02965 a1e6ca48e020cd096575895f1b8dabd7 517 Gene3D G3DSA:3.30.420.40 1 124 1.4E-8 T 14-10-2018 DB29_02965 a1e6ca48e020cd096575895f1b8dabd7 517 Pfam PF05378 Hydantoinase/oxoprolinase N-terminal region 4 173 2.8E-37 T 14-10-2018 IPR008040 Hydantoinaseoxoprolinase, N-terminal Reactome: R-HSA-174403|Reactome: R-HSA-5578998 DB29_02965 a1e6ca48e020cd096575895f1b8dabd7 517 Pfam PF01968 Hydantoinase/oxoprolinase 193 398 6.3E-32 T 14-10-2018 IPR002821 Hydantoinase A/oxoprolinase GO:0016787 Reactome: R-HSA-174403|Reactome: R-HSA-5578998 DB29_02965 a1e6ca48e020cd096575895f1b8dabd7 517 SUPERFAMILY SSF53067 269 443 1.26E-22 T 14-10-2018 DB29_02965 a1e6ca48e020cd096575895f1b8dabd7 517 SUPERFAMILY SSF53067 1 86 1.87E-12 T 14-10-2018 DB29_03590 d7d359f9200070a9e6162df06dd30359 250 SUPERFAMILY SSF46548 113 238 2.27E-28 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 DB29_03590 d7d359f9200070a9e6162df06dd30359 250 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 11 233 4.6E-42 T 14-10-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 DB29_03590 d7d359f9200070a9e6162df06dd30359 250 Pfam PF13183 4Fe-4S dicluster domain 150 225 3.4E-9 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DB29_03590 d7d359f9200070a9e6162df06dd30359 250 SUPERFAMILY SSF54292 2 111 1.32E-21 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 DB29_03590 d7d359f9200070a9e6162df06dd30359 250 Gene3D G3DSA:3.10.20.30 1 111 2.9E-29 T 14-10-2018 IPR012675 Beta-grasp domain superfamily DB29_03590 d7d359f9200070a9e6162df06dd30359 250 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 154 165 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DB29_03590 d7d359f9200070a9e6162df06dd30359 250 Gene3D G3DSA:1.10.1060.10 113 247 6.9E-30 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 DB29_03590 d7d359f9200070a9e6162df06dd30359 250 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 8 116 1.2E-28 T 14-10-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 DB29_00711 215a511ce9354f1fc762d04d305522e1 335 Gene3D G3DSA:3.30.420.40 149 312 1.6E-122 T 14-10-2018 DB29_00711 215a511ce9354f1fc762d04d305522e1 335 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 295 321 1.4E-52 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 DB29_00711 215a511ce9354f1fc762d04d305522e1 335 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 182 202 1.4E-52 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 DB29_00711 215a511ce9354f1fc762d04d305522e1 335 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 42 60 1.4E-52 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 DB29_00711 215a511ce9354f1fc762d04d305522e1 335 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 62 85 1.4E-52 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 DB29_00711 215a511ce9354f1fc762d04d305522e1 335 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 127 146 1.4E-52 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 DB29_00711 215a511ce9354f1fc762d04d305522e1 335 Gene3D G3DSA:3.90.640.10 181 254 1.6E-122 T 14-10-2018 DB29_00711 215a511ce9354f1fc762d04d305522e1 335 Gene3D G3DSA:3.30.420.40 7 322 1.6E-122 T 14-10-2018 DB29_00711 215a511ce9354f1fc762d04d305522e1 335 SUPERFAMILY SSF53067 6 141 1.06E-37 T 14-10-2018 DB29_00711 215a511ce9354f1fc762d04d305522e1 335 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 4 331 2.3E-136 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 DB29_00711 215a511ce9354f1fc762d04d305522e1 335 SUPERFAMILY SSF53067 144 328 4.58E-50 T 14-10-2018 DB29_00711 215a511ce9354f1fc762d04d305522e1 335 Pfam PF06723 MreB/Mbl protein 5 331 8.9E-143 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 DB29_00036 b78595dfcbaa07d1863332435483460b 378 SUPERFAMILY SSF53383 39 375 1.03E-105 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DB29_00036 b78595dfcbaa07d1863332435483460b 378 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 186 200 - T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 DB29_00036 b78595dfcbaa07d1863332435483460b 378 Gene3D G3DSA:3.40.640.10 1 244 7.0E-91 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DB29_00036 b78595dfcbaa07d1863332435483460b 378 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 4 375 2.1E-144 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 DB29_00036 b78595dfcbaa07d1863332435483460b 378 PIRSF PIRSF001434 1 378 1.1E-140 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 DB29_00036 b78595dfcbaa07d1863332435483460b 378 Gene3D G3DSA:3.90.1150.10 245 378 1.0E-45 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DB29_02349 a785a5b3945baceb330e51efacf4dfe3 133 Gene3D G3DSA:2.60.15.10 1 88 7.6E-29 T 14-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DB29_02349 a785a5b3945baceb330e51efacf4dfe3 133 Gene3D G3DSA:1.20.5.440 89 131 2.7E-12 T 14-10-2018 DB29_02349 a785a5b3945baceb330e51efacf4dfe3 133 SUPERFAMILY SSF51344 3 84 3.53E-22 T 14-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DB29_02349 a785a5b3945baceb330e51efacf4dfe3 133 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 86 129 2.1E-11 T 14-10-2018 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain DB29_02349 a785a5b3945baceb330e51efacf4dfe3 133 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 4 82 1.6E-25 T 14-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DB29_02349 a785a5b3945baceb330e51efacf4dfe3 133 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 3 128 6.8E-37 T 14-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DB29_02349 a785a5b3945baceb330e51efacf4dfe3 133 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 2 127 22.73 T 14-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DB29_02349 a785a5b3945baceb330e51efacf4dfe3 133 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 18 88 4.0E-33 T 14-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DB29_02349 a785a5b3945baceb330e51efacf4dfe3 133 SUPERFAMILY SSF46604 87 129 2.33E-6 T 14-10-2018 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DB29_02012 6e9a0be4635f5eae69a06929ff310518 483 Gene3D G3DSA:3.40.50.300 128 310 5.0E-63 T 14-10-2018 DB29_02012 6e9a0be4635f5eae69a06929ff310518 483 Gene3D G3DSA:1.10.10.60 417 480 1.5E-6 T 14-10-2018 DB29_02012 6e9a0be4635f5eae69a06929ff310518 483 Pfam PF02954 Bacterial regulatory protein, Fis family 444 474 1.1E-6 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DB29_02012 6e9a0be4635f5eae69a06929ff310518 483 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 164 177 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 DB29_02012 6e9a0be4635f5eae69a06929ff310518 483 Pfam PF00158 Sigma-54 interaction domain 140 306 9.1E-68 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 DB29_02012 6e9a0be4635f5eae69a06929ff310518 483 Gene3D G3DSA:1.10.8.60 311 387 2.5E-21 T 14-10-2018 DB29_02012 6e9a0be4635f5eae69a06929ff310518 483 Pfam PF00072 Response regulator receiver domain 4 112 1.2E-21 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DB29_02012 6e9a0be4635f5eae69a06929ff310518 483 SMART SM00448 2 114 3.0E-21 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DB29_02012 6e9a0be4635f5eae69a06929ff310518 483 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 349 358 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site DB29_02012 6e9a0be4635f5eae69a06929ff310518 483 Gene3D G3DSA:3.40.50.2300 1 127 2.6E-28 T 14-10-2018 DB29_02012 6e9a0be4635f5eae69a06929ff310518 483 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 226 241 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 DB29_02012 6e9a0be4635f5eae69a06929ff310518 483 SMART SM00382 160 303 3.6E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_02012 6e9a0be4635f5eae69a06929ff310518 483 SUPERFAMILY SSF52172 1 184 2.42E-31 T 14-10-2018 IPR011006 CheY-like superfamily DB29_02012 6e9a0be4635f5eae69a06929ff310518 483 SUPERFAMILY SSF52540 140 373 1.54E-68 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_02012 6e9a0be4635f5eae69a06929ff310518 483 SUPERFAMILY SSF46689 349 478 8.51E-6 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DB29_02563 d991a30f5e48f1711931cc256351f518 397 SUPERFAMILY SSF53187 12 376 1.29E-64 T 14-10-2018 DB29_02563 d991a30f5e48f1711931cc256351f518 397 SUPERFAMILY SSF55031 178 284 2.36E-20 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain DB29_02563 d991a30f5e48f1711931cc256351f518 397 Gene3D G3DSA:3.40.630.10 28 366 4.2E-126 T 14-10-2018 DB29_02563 d991a30f5e48f1711931cc256351f518 397 PIRSF PIRSF037226 4 396 3.3E-168 T 14-10-2018 IPR017144 Peptidase M20A, amidohydrolase, predicted DB29_02563 d991a30f5e48f1711931cc256351f518 397 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 26 346 8.6E-61 T 14-10-2018 IPR017439 Amidohydrolase GO:0016787 DB29_02563 d991a30f5e48f1711931cc256351f518 397 Pfam PF01546 Peptidase family M20/M25/M40 98 347 2.3E-7 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 DB29_02563 d991a30f5e48f1711931cc256351f518 397 Pfam PF07687 Peptidase dimerisation domain 175 270 1.3E-9 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain DB29_02563 d991a30f5e48f1711931cc256351f518 397 Gene3D G3DSA:3.30.70.360 173 289 4.2E-126 T 14-10-2018 DB29_04291 69ab5b48f9e14833957c552bc6f47bc8 376 Gene3D G3DSA:1.10.246.80 318 376 3.0E-16 T 14-10-2018 DB29_04291 69ab5b48f9e14833957c552bc6f47bc8 376 Gene3D G3DSA:1.20.58.560 245 317 4.6E-6 T 14-10-2018 DB29_04291 69ab5b48f9e14833957c552bc6f47bc8 376 Gene3D G3DSA:1.10.110.30 128 221 9.3E-20 T 14-10-2018 DB29_04291 69ab5b48f9e14833957c552bc6f47bc8 376 Hamap MF_01263 CCA-adding enzyme [cca]. 1 373 34.738 T 14-10-2018 IPR023068 CCA-adding enzyme, firmicutes GO:0001680|GO:0004810|GO:0016437 DB29_04291 69ab5b48f9e14833957c552bc6f47bc8 376 Pfam PF13735 tRNA nucleotidyltransferase domain 2 putative 226 368 1.1E-36 T 14-10-2018 IPR032810 CCA-adding enzyme, C-terminal DB29_04291 69ab5b48f9e14833957c552bc6f47bc8 376 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 152 209 1.2E-5 T 14-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 DB29_04291 69ab5b48f9e14833957c552bc6f47bc8 376 Gene3D G3DSA:3.30.460.10 2 126 1.1E-35 T 14-10-2018 DB29_04291 69ab5b48f9e14833957c552bc6f47bc8 376 SUPERFAMILY SSF81891 128 369 1.83E-39 T 14-10-2018 DB29_04291 69ab5b48f9e14833957c552bc6f47bc8 376 Pfam PF01743 Poly A polymerase head domain 21 85 2.0E-14 T 14-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 DB29_04291 69ab5b48f9e14833957c552bc6f47bc8 376 SUPERFAMILY SSF81301 8 122 9.37E-33 T 14-10-2018 DB29_01550 4bda5431cac4fbb685aa46e193811972 237 Gene3D G3DSA:3.40.50.2300 1 140 1.3E-36 T 14-10-2018 DB29_01550 4bda5431cac4fbb685aa46e193811972 237 SMART SM00862 160 235 8.8E-29 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DB29_01550 4bda5431cac4fbb685aa46e193811972 237 SUPERFAMILY SSF52172 10 193 1.19E-41 T 14-10-2018 IPR011006 CheY-like superfamily DB29_01550 4bda5431cac4fbb685aa46e193811972 237 Pfam PF00072 Response regulator receiver domain 15 124 1.2E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DB29_01550 4bda5431cac4fbb685aa46e193811972 237 Pfam PF00486 Transcriptional regulatory protein, C terminal 161 234 2.9E-29 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DB29_01550 4bda5431cac4fbb685aa46e193811972 237 Gene3D G3DSA:1.10.10.10 141 237 6.2E-37 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_01550 4bda5431cac4fbb685aa46e193811972 237 SMART SM00448 13 123 1.2E-42 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DB29_02697 465933160b691bba9f9c30d2de91585f 240 Pfam PF00005 ABC transporter 21 164 6.7E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB29_02697 465933160b691bba9f9c30d2de91585f 240 SMART SM00382 29 213 4.5E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_02697 465933160b691bba9f9c30d2de91585f 240 SUPERFAMILY SSF52540 3 229 7.73E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_02697 465933160b691bba9f9c30d2de91585f 240 Gene3D G3DSA:3.40.50.300 1 239 3.0E-62 T 14-10-2018 DB29_02697 465933160b691bba9f9c30d2de91585f 240 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB29_02044 49ada34599e7f18a7ab33a65f0521b81 264 Pfam PF00795 Carbon-nitrogen hydrolase 3 249 1.1E-51 T 14-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 DB29_02044 49ada34599e7f18a7ab33a65f0521b81 264 Gene3D G3DSA:3.60.110.10 1 264 1.8E-92 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily DB29_02044 49ada34599e7f18a7ab33a65f0521b81 264 SUPERFAMILY SSF56317 1 264 3.27E-75 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily DB29_02044 49ada34599e7f18a7ab33a65f0521b81 264 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 144 164 - T 14-10-2018 IPR001110 Uncharacterised protein family UPF0012, conserved site DB29_02224 949f3b621146c23f9287b59971ef18b8 400 Pfam PF07690 Major Facilitator Superfamily 14 327 4.3E-29 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DB29_02224 949f3b621146c23f9287b59971ef18b8 400 SUPERFAMILY SSF103473 6 393 1.22E-55 T 14-10-2018 IPR036259 MFS transporter superfamily DB29_02224 949f3b621146c23f9287b59971ef18b8 400 PRINTS PR01035 Tetracycline resistance protein signature 45 64 9.9E-9 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 DB29_02224 949f3b621146c23f9287b59971ef18b8 400 PRINTS PR01035 Tetracycline resistance protein signature 275 296 9.9E-9 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 DB29_02224 949f3b621146c23f9287b59971ef18b8 400 PRINTS PR01035 Tetracycline resistance protein signature 164 184 9.9E-9 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 DB29_02224 949f3b621146c23f9287b59971ef18b8 400 PRINTS PR01035 Tetracycline resistance protein signature 105 126 9.9E-9 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 DB29_02224 949f3b621146c23f9287b59971ef18b8 400 Gene3D G3DSA:1.20.1250.20 4 386 4.3E-53 T 14-10-2018 DB29_02159 9f71befefafad1fed880d57e08d9d2b9 236 Gene3D G3DSA:3.40.50.1580 2 236 6.1E-72 T 14-10-2018 DB29_02159 9f71befefafad1fed880d57e08d9d2b9 236 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 65 80 - T 14-10-2018 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-73614|Reactome: R-HSA-73621 DB29_02159 9f71befefafad1fed880d57e08d9d2b9 236 Pfam PF01048 Phosphorylase superfamily 20 223 1.5E-40 T 14-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 DB29_02159 9f71befefafad1fed880d57e08d9d2b9 236 TIGRFAM TIGR00107 deoD: purine nucleoside phosphorylase 9 235 4.7E-93 T 14-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 DB29_02159 9f71befefafad1fed880d57e08d9d2b9 236 Hamap MF_01627 Purine nucleoside phosphorylase DeoD-type [deoD]. 6 236 41.777 T 14-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 DB29_02159 9f71befefafad1fed880d57e08d9d2b9 236 SUPERFAMILY SSF53167 7 235 2.36E-89 T 14-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 DB29_03194 aaac7bc1e9e55a1e1192d1096106be66 722 Pfam PF00535 Glycosyl transferase family 2 5 139 1.2E-12 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 DB29_03194 aaac7bc1e9e55a1e1192d1096106be66 722 SUPERFAMILY SSF53756 475 717 3.37E-18 T 14-10-2018 DB29_03194 aaac7bc1e9e55a1e1192d1096106be66 722 Gene3D G3DSA:3.40.50.12580 523 705 3.2E-142 T 14-10-2018 DB29_03194 aaac7bc1e9e55a1e1192d1096106be66 722 Gene3D G3DSA:3.40.50.11820 354 712 3.2E-142 T 14-10-2018 DB29_03194 aaac7bc1e9e55a1e1192d1096106be66 722 Gene3D G3DSA:3.90.550.10 3 206 4.9E-25 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DB29_03194 aaac7bc1e9e55a1e1192d1096106be66 722 Pfam PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase 356 717 2.4E-119 T 14-10-2018 IPR007554 CDP-glycerol glycerophosphotransferase GO:0016020|GO:0047355 DB29_03194 aaac7bc1e9e55a1e1192d1096106be66 722 SUPERFAMILY SSF53448 4 219 2.06E-23 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DB29_00627 b1341cd0ab59f1333b23a4cff8b705c1 105 TIGRFAM TIGR03582 EF_0829: PRD domain protein, EF_0829/AHA_3910 family 1 104 6.8E-45 T 14-10-2018 IPR020044 PRD domain protein, EF0829/AHA3910 DB29_00627 b1341cd0ab59f1333b23a4cff8b705c1 105 Pfam PF00874 PRD domain 23 100 1.6E-6 T 14-10-2018 IPR011608 PRD domain GO:0006355 DB29_00627 b1341cd0ab59f1333b23a4cff8b705c1 105 SUPERFAMILY SSF63520 10 104 1.31E-11 T 14-10-2018 IPR036634 PRD domain superfamily GO:0006355 DB29_00627 b1341cd0ab59f1333b23a4cff8b705c1 105 Gene3D G3DSA:1.10.1790.10 1 104 4.8E-36 T 14-10-2018 DB29_00922 e017c1eecad4227c6928df6d1aa210c1 576 SUPERFAMILY SSF51338 13 370 1.45E-17 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DB29_00922 e017c1eecad4227c6928df6d1aa210c1 576 Pfam PF13382 Adenine deaminase C-terminal domain 406 571 1.7E-58 T 14-10-2018 IPR026912 Adenine deaminase C-terminal domain KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 DB29_00922 e017c1eecad4227c6928df6d1aa210c1 576 Hamap MF_01518 Adenine deaminase [ade]. 22 575 36.691 T 14-10-2018 IPR006679 Adenine deaminase GO:0000034|GO:0006146 KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 DB29_00922 e017c1eecad4227c6928df6d1aa210c1 576 TIGRFAM TIGR01178 ade: adenine deaminase 22 575 6.8E-185 T 14-10-2018 IPR006679 Adenine deaminase GO:0000034|GO:0006146 KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 DB29_00922 e017c1eecad4227c6928df6d1aa210c1 576 Gene3D G3DSA:2.30.40.10 14 353 1.8E-120 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DB29_00922 e017c1eecad4227c6928df6d1aa210c1 576 SUPERFAMILY SSF51556 74 321 1.42E-41 T 14-10-2018 IPR032466 Metal-dependent hydrolase DB29_00922 e017c1eecad4227c6928df6d1aa210c1 576 Pfam PF01979 Amidohydrolase family 69 351 6.3E-30 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 DB29_00922 e017c1eecad4227c6928df6d1aa210c1 576 Gene3D G3DSA:3.20.20.140 73 316 1.8E-120 T 14-10-2018 DB29_03109 99889188e300bb1d2fe45a2201b151c6 266 SUPERFAMILY SSF53448 1 206 1.45E-32 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DB29_03109 99889188e300bb1d2fe45a2201b151c6 266 Gene3D G3DSA:3.90.550.10 1 212 3.3E-27 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DB29_03109 99889188e300bb1d2fe45a2201b151c6 266 Pfam PF00535 Glycosyl transferase family 2 4 129 1.6E-19 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 DB29_03621 d1410767f2a567dcd9be7fec648f82ba 454 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 99 122 - T 14-10-2018 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 DB29_03621 d1410767f2a567dcd9be7fec648f82ba 454 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 417 30.157 T 14-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 DB29_03621 d1410767f2a567dcd9be7fec648f82ba 454 Gene3D G3DSA:3.30.460.30 2 158 1.3E-57 T 14-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 DB29_03621 d1410767f2a567dcd9be7fec648f82ba 454 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 323 419 1.1E-21 T 14-10-2018 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 DB29_03621 d1410767f2a567dcd9be7fec648f82ba 454 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 171 306 5.0E-46 T 14-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase DB29_03621 d1410767f2a567dcd9be7fec648f82ba 454 SUPERFAMILY SSF69075 317 420 7.98E-17 T 14-10-2018 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 DB29_03621 d1410767f2a567dcd9be7fec648f82ba 454 SUPERFAMILY SSF51735 163 315 4.4E-36 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_03621 d1410767f2a567dcd9be7fec648f82ba 454 SUPERFAMILY SSF69742 1 158 3.79E-49 T 14-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 DB29_03621 d1410767f2a567dcd9be7fec648f82ba 454 Gene3D G3DSA:3.40.50.720 161 313 2.9E-46 T 14-10-2018 DB29_03621 d1410767f2a567dcd9be7fec648f82ba 454 PIRSF PIRSF000445 1 434 1.4E-158 T 14-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 DB29_03621 d1410767f2a567dcd9be7fec648f82ba 454 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 6 156 4.8E-50 T 14-10-2018 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 DB29_03621 d1410767f2a567dcd9be7fec648f82ba 454 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 4 419 4.6E-153 T 14-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 DB29_03368 80a5e860077860c60b9279242344d8fc 277 Gene3D G3DSA:3.10.310.10 119 267 1.6E-104 T 14-10-2018 DB29_03368 80a5e860077860c60b9279242344d8fc 277 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 1 276 3.7E-85 T 14-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 DB29_03368 80a5e860077860c60b9279242344d8fc 277 Pfam PF01678 Diaminopimelate epimerase 154 269 6.2E-29 T 14-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 DB29_03368 80a5e860077860c60b9279242344d8fc 277 Pfam PF01678 Diaminopimelate epimerase 1 123 1.5E-28 T 14-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 DB29_03368 80a5e860077860c60b9279242344d8fc 277 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 59 73 - T 14-10-2018 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 DB29_03368 80a5e860077860c60b9279242344d8fc 277 SUPERFAMILY SSF54506 1 274 9.42E-49 T 14-10-2018 DB29_03368 80a5e860077860c60b9279242344d8fc 277 Gene3D G3DSA:3.10.310.10 1 273 1.6E-104 T 14-10-2018 DB29_03368 80a5e860077860c60b9279242344d8fc 277 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 1 277 34.323 T 14-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 DB29_03027 2f7b6a89b773e0e67d09c6c4d4af7d47 275 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 4 274 17.576 T 14-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 DB29_03027 2f7b6a89b773e0e67d09c6c4d4af7d47 275 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 9 267 1.7E-87 T 14-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 DB29_03027 2f7b6a89b773e0e67d09c6c4d4af7d47 275 Pfam PF02673 Bacitracin resistance protein BacA 9 269 6.1E-80 T 14-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 DB29_04123 07a1215da0710f7104a4f2aad6b6a419 594 Pfam PF00005 ABC transporter 367 516 1.3E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB29_04123 07a1215da0710f7104a4f2aad6b6a419 594 SUPERFAMILY SSF52540 344 586 1.33E-84 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_04123 07a1215da0710f7104a4f2aad6b6a419 594 Gene3D G3DSA:3.40.50.300 342 593 1.9E-87 T 14-10-2018 DB29_04123 07a1215da0710f7104a4f2aad6b6a419 594 SUPERFAMILY SSF90123 19 333 1.44E-76 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DB29_04123 07a1215da0710f7104a4f2aad6b6a419 594 Pfam PF00664 ABC transporter transmembrane region 33 304 1.1E-44 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 DB29_04123 07a1215da0710f7104a4f2aad6b6a419 594 ProSitePatterns PS00211 ABC transporters family signature. 488 502 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB29_04123 07a1215da0710f7104a4f2aad6b6a419 594 SMART SM00382 376 562 6.3E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_04123 07a1215da0710f7104a4f2aad6b6a419 594 Gene3D G3DSA:1.20.1560.10 5 334 4.3E-83 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DB29_02602 6a25931ffd31b435b3113df458292c54 255 Gene3D G3DSA:3.40.50.720 1 254 9.6E-79 T 14-10-2018 DB29_02602 6a25931ffd31b435b3113df458292c54 255 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 251 1.7E-58 T 14-10-2018 DB29_02602 6a25931ffd31b435b3113df458292c54 255 SUPERFAMILY SSF51735 6 252 4.08E-75 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_02602 6a25931ffd31b435b3113df458292c54 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 4.1E-43 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_02602 6a25931ffd31b435b3113df458292c54 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 4.1E-43 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_02602 6a25931ffd31b435b3113df458292c54 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 4.1E-43 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_02602 6a25931ffd31b435b3113df458292c54 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 188 205 4.1E-43 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_02602 6a25931ffd31b435b3113df458292c54 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 4.1E-43 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_02602 6a25931ffd31b435b3113df458292c54 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 186 4.1E-43 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_02602 6a25931ffd31b435b3113df458292c54 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 8.2E-14 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_02602 6a25931ffd31b435b3113df458292c54 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 167 186 8.2E-14 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_02602 6a25931ffd31b435b3113df458292c54 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 8.2E-14 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_03187 8d0e0ee5297922a9b962525f61543de8 128 PIRSF PIRSF005087 1 126 3.0E-38 T 14-10-2018 IPR004465 Ribonucleotide reductase Class Ib, NrdI DB29_03187 8d0e0ee5297922a9b962525f61543de8 128 Pfam PF07972 NrdI Flavodoxin like 5 112 8.1E-31 T 14-10-2018 IPR004465 Ribonucleotide reductase Class Ib, NrdI DB29_03187 8d0e0ee5297922a9b962525f61543de8 128 SUPERFAMILY SSF52218 1 120 3.93E-21 T 14-10-2018 IPR029039 Flavoprotein-like superfamily DB29_03187 8d0e0ee5297922a9b962525f61543de8 128 TIGRFAM TIGR00333 nrdI: nrdI protein 5 113 3.2E-37 T 14-10-2018 IPR004465 Ribonucleotide reductase Class Ib, NrdI DB29_03187 8d0e0ee5297922a9b962525f61543de8 128 Hamap MF_00128 Protein NrdI [nrdI]. 3 123 25.091 T 14-10-2018 IPR020852 Ribonucleotide reductase, class Ib, NrdI, bacterial DB29_03187 8d0e0ee5297922a9b962525f61543de8 128 Gene3D G3DSA:3.40.50.360 1 126 1.4E-40 T 14-10-2018 IPR029039 Flavoprotein-like superfamily DB29_03893 815031b14faa94d3369825d6e515a4f7 92 Pfam PF09902 Uncharacterized protein conserved in bacteria (DUF2129) 6 75 1.2E-30 T 14-10-2018 IPR016979 Protein of unknown function DUF2129 DB29_03893 815031b14faa94d3369825d6e515a4f7 92 Hamap MF_01126 UPF0298 protein . 2 79 21.077 T 14-10-2018 IPR016979 Protein of unknown function DUF2129 DB29_03893 815031b14faa94d3369825d6e515a4f7 92 PIRSF PIRSF031653 1 92 3.0E-35 T 14-10-2018 IPR016979 Protein of unknown function DUF2129 DB29_02138 13392c6fa97a1f9450a4b2db535e9799 291 SUPERFAMILY SSF46785 1 86 2.0E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_02138 13392c6fa97a1f9450a4b2db535e9799 291 Gene3D G3DSA:3.40.190.10 161 265 3.5E-24 T 14-10-2018 DB29_02138 13392c6fa97a1f9450a4b2db535e9799 291 Gene3D G3DSA:3.40.190.10 92 286 3.5E-24 T 14-10-2018 DB29_02138 13392c6fa97a1f9450a4b2db535e9799 291 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 1.2E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DB29_02138 13392c6fa97a1f9450a4b2db535e9799 291 Pfam PF03466 LysR substrate binding domain 87 288 6.1E-30 T 14-10-2018 IPR005119 LysR, substrate-binding DB29_02138 13392c6fa97a1f9450a4b2db535e9799 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.3E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DB29_02138 13392c6fa97a1f9450a4b2db535e9799 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.3E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DB29_02138 13392c6fa97a1f9450a4b2db535e9799 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.3E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DB29_02138 13392c6fa97a1f9450a4b2db535e9799 291 SUPERFAMILY SSF53850 88 290 1.76E-24 T 14-10-2018 DB29_02138 13392c6fa97a1f9450a4b2db535e9799 291 Gene3D G3DSA:1.10.10.10 1 91 1.4E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_01738 a87a9581ab754ab4dfacf9f4a345fbb3 569 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 480 489 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site DB29_01738 a87a9581ab754ab4dfacf9f4a345fbb3 569 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 532 549 1.6E-9 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DB29_01738 a87a9581ab754ab4dfacf9f4a345fbb3 569 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 549 569 1.6E-9 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DB29_01738 a87a9581ab754ab4dfacf9f4a345fbb3 569 SUPERFAMILY SSF55785 118 225 2.56E-12 T 14-10-2018 IPR035965 PAS domain superfamily DB29_01738 a87a9581ab754ab4dfacf9f4a345fbb3 569 Pfam PF00989 PAS fold 131 199 5.6E-6 T 14-10-2018 IPR013767 PAS fold GO:0006355 DB29_01738 a87a9581ab754ab4dfacf9f4a345fbb3 569 Gene3D G3DSA:3.30.450.20 119 227 2.8E-16 T 14-10-2018 DB29_01738 a87a9581ab754ab4dfacf9f4a345fbb3 569 Pfam PF02954 Bacterial regulatory protein, Fis family 528 565 9.7E-13 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DB29_01738 a87a9581ab754ab4dfacf9f4a345fbb3 569 Gene3D G3DSA:3.40.50.300 252 437 3.7E-63 T 14-10-2018 DB29_01738 a87a9581ab754ab4dfacf9f4a345fbb3 569 Gene3D G3DSA:1.10.10.60 505 567 6.7E-15 T 14-10-2018 DB29_01738 a87a9581ab754ab4dfacf9f4a345fbb3 569 SMART SM00091 129 197 1.3E-5 T 14-10-2018 IPR000014 PAS domain DB29_01738 a87a9581ab754ab4dfacf9f4a345fbb3 569 SUPERFAMILY SSF52540 266 510 8.74E-70 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_01738 a87a9581ab754ab4dfacf9f4a345fbb3 569 SUPERFAMILY SSF46689 516 565 8.6E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DB29_01738 a87a9581ab754ab4dfacf9f4a345fbb3 569 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 126 197 2.5E-7 T 14-10-2018 IPR000014 PAS domain DB29_01738 a87a9581ab754ab4dfacf9f4a345fbb3 569 SMART SM00382 286 430 4.2E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_01738 a87a9581ab754ab4dfacf9f4a345fbb3 569 Gene3D G3DSA:1.10.8.60 438 504 1.8E-21 T 14-10-2018 DB29_01738 a87a9581ab754ab4dfacf9f4a345fbb3 569 Pfam PF00158 Sigma-54 interaction domain 266 433 2.7E-66 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 DB29_01738 a87a9581ab754ab4dfacf9f4a345fbb3 569 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 290 303 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 DB29_03030 fc8b17ba40feefb8dfb6f855d07184d4 470 Gene3D G3DSA:3.30.70.2740 336 417 1.5E-14 T 14-10-2018 DB29_03030 fc8b17ba40feefb8dfb6f855d07184d4 470 Pfam PF01565 FAD binding domain 41 180 3.1E-43 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 DB29_03030 fc8b17ba40feefb8dfb6f855d07184d4 470 Gene3D G3DSA:3.30.465.40 3 235 3.7E-81 T 14-10-2018 DB29_03030 fc8b17ba40feefb8dfb6f855d07184d4 470 Pfam PF02913 FAD linked oxidases, C-terminal domain 217 457 5.8E-74 T 14-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 DB29_03030 fc8b17ba40feefb8dfb6f855d07184d4 470 TIGRFAM TIGR00387 glcD: glycolate oxidase, subunit GlcD 44 456 7.8E-179 T 14-10-2018 IPR004490 Glycolate oxidase subunit GlcD GO:0008891|GO:0009339 DB29_03030 fc8b17ba40feefb8dfb6f855d07184d4 470 Gene3D G3DSA:1.10.45.10 418 457 6.9E-11 T 14-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 DB29_03030 fc8b17ba40feefb8dfb6f855d07184d4 470 SUPERFAMILY SSF55103 220 459 6.38E-70 T 14-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 DB29_03030 fc8b17ba40feefb8dfb6f855d07184d4 470 SUPERFAMILY SSF56176 4 217 5.14E-77 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 DB29_04198 4219f4ab46717d17c1f84c3a16d41a8f 115 SUPERFAMILY SSF47413 1 69 3.22E-20 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DB29_04198 4219f4ab46717d17c1f84c3a16d41a8f 115 Gene3D G3DSA:1.10.260.40 3 114 4.5E-25 T 14-10-2018 DB29_04198 4219f4ab46717d17c1f84c3a16d41a8f 115 SMART SM00530 6 61 2.5E-16 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DB29_04198 4219f4ab46717d17c1f84c3a16d41a8f 115 Pfam PF01381 Helix-turn-helix 7 61 3.6E-16 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DB29_01699 07576cefc8793002220e34deff9fa87c 449 SUPERFAMILY SSF53850 43 436 5.18E-77 T 14-10-2018 DB29_01699 07576cefc8793002220e34deff9fa87c 449 Gene3D G3DSA:3.40.190.10 45 394 7.5E-119 T 14-10-2018 DB29_01699 07576cefc8793002220e34deff9fa87c 449 Gene3D G3DSA:3.40.190.10 157 434 7.5E-119 T 14-10-2018 DB29_01699 07576cefc8793002220e34deff9fa87c 449 Pfam PF13416 Bacterial extracellular solute-binding protein 60 373 1.9E-52 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein DB29_02685 867147a171bc28f619a8e848db762a60 187 Pfam PF04203 Sortase family 62 181 2.1E-26 T 14-10-2018 IPR005754 Sortase family DB29_02685 867147a171bc28f619a8e848db762a60 187 TIGRFAM TIGR01076 sortase_fam: sortase 62 181 4.0E-19 T 14-10-2018 IPR005754 Sortase family DB29_02685 867147a171bc28f619a8e848db762a60 187 Gene3D G3DSA:2.40.260.10 13 186 4.1E-37 T 14-10-2018 IPR023365 Sortase domain superfamily DB29_02685 867147a171bc28f619a8e848db762a60 187 SUPERFAMILY SSF63817 49 185 1.96E-34 T 14-10-2018 IPR023365 Sortase domain superfamily DB29_03393 465d3cb015ee0f17f2ed007a712089c4 260 TIGRFAM TIGR00694 thiM: hydroxyethylthiazole kinase 1 249 1.3E-85 T 14-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 DB29_03393 465d3cb015ee0f17f2ed007a712089c4 260 Pfam PF02110 Hydroxyethylthiazole kinase family 1 248 6.6E-83 T 14-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 DB29_03393 465d3cb015ee0f17f2ed007a712089c4 260 SUPERFAMILY SSF53613 2 251 2.03E-61 T 14-10-2018 IPR029056 Ribokinase-like DB29_03393 465d3cb015ee0f17f2ed007a712089c4 260 Gene3D G3DSA:3.40.1190.20 1 259 1.4E-94 T 14-10-2018 IPR029056 Ribokinase-like DB29_03393 465d3cb015ee0f17f2ed007a712089c4 260 PIRSF PIRSF000513 1 259 7.2E-93 T 14-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 DB29_03393 465d3cb015ee0f17f2ed007a712089c4 260 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 9 16 2.5E-40 T 14-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 DB29_03393 465d3cb015ee0f17f2ed007a712089c4 260 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 22 43 2.5E-40 T 14-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 DB29_03393 465d3cb015ee0f17f2ed007a712089c4 260 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 79 96 2.5E-40 T 14-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 DB29_03393 465d3cb015ee0f17f2ed007a712089c4 260 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 53 61 2.5E-40 T 14-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 DB29_03393 465d3cb015ee0f17f2ed007a712089c4 260 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 153 170 2.5E-40 T 14-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 DB29_03393 465d3cb015ee0f17f2ed007a712089c4 260 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 110 124 2.5E-40 T 14-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 DB29_03393 465d3cb015ee0f17f2ed007a712089c4 260 Hamap MF_00228 Hydroxyethylthiazole kinase [thiM]. 3 251 32.686 T 14-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 DB29_04178 da3675bf26810f3f95016b3798f0c557 528 SMART SM00382 26 238 1.0E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_04178 da3675bf26810f3f95016b3798f0c557 528 SMART SM00382 344 521 2.1E-5 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_04178 da3675bf26810f3f95016b3798f0c557 528 SUPERFAMILY SSF52540 295 526 5.72E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_04178 da3675bf26810f3f95016b3798f0c557 528 Gene3D G3DSA:3.40.50.300 1 279 1.2E-56 T 14-10-2018 DB29_04178 da3675bf26810f3f95016b3798f0c557 528 SUPERFAMILY SSF52540 2 254 4.04E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_04178 da3675bf26810f3f95016b3798f0c557 528 Pfam PF12848 ABC transporter 224 309 1.7E-21 T 14-10-2018 IPR032781 ABC-transporter extension domain DB29_04178 da3675bf26810f3f95016b3798f0c557 528 Gene3D G3DSA:3.40.50.300 282 528 7.4E-44 T 14-10-2018 DB29_04178 da3675bf26810f3f95016b3798f0c557 528 Pfam PF00005 ABC transporter 335 468 1.8E-17 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB29_04178 da3675bf26810f3f95016b3798f0c557 528 Pfam PF00005 ABC transporter 18 184 2.5E-21 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB29_03278 48fb0d8f9335cf0bade14a9b6fe995e0 394 PRINTS PR00477 Phosphoglycerate kinase family signature 137 159 4.2E-97 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DB29_03278 48fb0d8f9335cf0bade14a9b6fe995e0 394 PRINTS PR00477 Phosphoglycerate kinase family signature 167 189 4.2E-97 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DB29_03278 48fb0d8f9335cf0bade14a9b6fe995e0 394 PRINTS PR00477 Phosphoglycerate kinase family signature 190 209 4.2E-97 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DB29_03278 48fb0d8f9335cf0bade14a9b6fe995e0 394 PRINTS PR00477 Phosphoglycerate kinase family signature 369 386 4.2E-97 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DB29_03278 48fb0d8f9335cf0bade14a9b6fe995e0 394 PRINTS PR00477 Phosphoglycerate kinase family signature 10 26 4.2E-97 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DB29_03278 48fb0d8f9335cf0bade14a9b6fe995e0 394 PRINTS PR00477 Phosphoglycerate kinase family signature 109 124 4.2E-97 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DB29_03278 48fb0d8f9335cf0bade14a9b6fe995e0 394 PRINTS PR00477 Phosphoglycerate kinase family signature 31 53 4.2E-97 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DB29_03278 48fb0d8f9335cf0bade14a9b6fe995e0 394 PRINTS PR00477 Phosphoglycerate kinase family signature 346 357 4.2E-97 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DB29_03278 48fb0d8f9335cf0bade14a9b6fe995e0 394 PRINTS PR00477 Phosphoglycerate kinase family signature 312 337 4.2E-97 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DB29_03278 48fb0d8f9335cf0bade14a9b6fe995e0 394 Gene3D G3DSA:3.40.50.1260 8 391 1.6E-166 T 14-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DB29_03278 48fb0d8f9335cf0bade14a9b6fe995e0 394 PIRSF PIRSF000724 1 394 1.3E-160 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DB29_03278 48fb0d8f9335cf0bade14a9b6fe995e0 394 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 15 25 - T 14-10-2018 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DB29_03278 48fb0d8f9335cf0bade14a9b6fe995e0 394 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 5 393 43.407 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DB29_03278 48fb0d8f9335cf0bade14a9b6fe995e0 394 Gene3D G3DSA:3.40.50.1260 169 383 1.6E-166 T 14-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DB29_03278 48fb0d8f9335cf0bade14a9b6fe995e0 394 Pfam PF00162 Phosphoglycerate kinase 7 383 4.3E-165 T 14-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DB29_03278 48fb0d8f9335cf0bade14a9b6fe995e0 394 SUPERFAMILY SSF53748 1 393 8.36E-165 T 14-10-2018 IPR036043 Phosphoglycerate kinase superfamily GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DB29_03444 0d20e22682a599f2b831d5a84d3a2c6f 396 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 20 378 1.0E-119 T 14-10-2018 IPR017439 Amidohydrolase GO:0016787 DB29_03444 0d20e22682a599f2b831d5a84d3a2c6f 396 Gene3D G3DSA:3.30.70.360 187 301 1.8E-145 T 14-10-2018 DB29_03444 0d20e22682a599f2b831d5a84d3a2c6f 396 SUPERFAMILY SSF55031 187 305 7.98E-30 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain DB29_03444 0d20e22682a599f2b831d5a84d3a2c6f 396 Pfam PF01546 Peptidase family M20/M25/M40 78 374 1.2E-29 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 DB29_03444 0d20e22682a599f2b831d5a84d3a2c6f 396 SUPERFAMILY SSF53187 10 393 1.2E-86 T 14-10-2018 DB29_03444 0d20e22682a599f2b831d5a84d3a2c6f 396 PIRSF PIRSF005962 3 396 5.0E-131 T 14-10-2018 IPR017439 Amidohydrolase GO:0016787 DB29_03444 0d20e22682a599f2b831d5a84d3a2c6f 396 Pfam PF07687 Peptidase dimerisation domain 192 283 4.2E-13 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain DB29_03444 0d20e22682a599f2b831d5a84d3a2c6f 396 Gene3D G3DSA:3.40.630.10 19 378 1.8E-145 T 14-10-2018 DB29_04302 e1e8183b2d1991a7318e5230f70180fd 430 SUPERFAMILY SSF55681 110 424 1.8E-97 T 14-10-2018 DB29_04302 e1e8183b2d1991a7318e5230f70180fd 430 PRINTS PR01042 Aspartyl-tRNA synthetase signature 196 209 1.1E-15 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 DB29_04302 e1e8183b2d1991a7318e5230f70180fd 430 PRINTS PR01042 Aspartyl-tRNA synthetase signature 385 399 1.1E-15 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 DB29_04302 e1e8183b2d1991a7318e5230f70180fd 430 PRINTS PR01042 Aspartyl-tRNA synthetase signature 345 361 1.1E-15 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 DB29_04302 e1e8183b2d1991a7318e5230f70180fd 430 PRINTS PR01042 Aspartyl-tRNA synthetase signature 180 192 1.1E-15 T 14-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 DB29_04302 e1e8183b2d1991a7318e5230f70180fd 430 TIGRFAM TIGR00457 asnS: asparagine--tRNA ligase 1 429 6.2E-165 T 14-10-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 DB29_04302 e1e8183b2d1991a7318e5230f70180fd 430 Pfam PF00152 tRNA synthetases class II (D, K and N) 111 424 2.2E-83 T 14-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 DB29_04302 e1e8183b2d1991a7318e5230f70180fd 430 Gene3D G3DSA:2.40.50.140 2 101 5.9E-24 T 14-10-2018 DB29_04302 e1e8183b2d1991a7318e5230f70180fd 430 Hamap MF_00534 Asparagine--tRNA ligase [asnS]. 1 430 42.108 T 14-10-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 DB29_04302 e1e8183b2d1991a7318e5230f70180fd 430 Pfam PF01336 OB-fold nucleic acid binding domain 16 95 5.5E-18 T 14-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 DB29_04302 e1e8183b2d1991a7318e5230f70180fd 430 SUPERFAMILY SSF50249 9 102 1.46E-24 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DB29_04302 e1e8183b2d1991a7318e5230f70180fd 430 Gene3D G3DSA:3.30.930.10 102 430 4.2E-117 T 14-10-2018 DB29_02057 71ffbe554e41d0bd42248a21732a288f 72 Gene3D G3DSA:3.10.290.10 1 69 3.9E-21 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 DB29_02057 71ffbe554e41d0bd42248a21732a288f 72 SUPERFAMILY SSF55174 3 65 1.06E-16 T 14-10-2018 DB29_02057 71ffbe554e41d0bd42248a21732a288f 72 TIGRFAM TIGR02988 YaaA_near_RecF: S4 domain protein YaaA 3 62 2.7E-30 T 14-10-2018 IPR014330 RNA-binding S4-related,YaaA DB29_02057 71ffbe554e41d0bd42248a21732a288f 72 Pfam PF13275 S4 domain 4 68 1.8E-26 T 14-10-2018 DB29_00947 4c2a5eaa2e6872f2ba4d1aa58e30a2aa 346 SMART SM00829 7 342 6.0E-6 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 DB29_00947 4c2a5eaa2e6872f2ba4d1aa58e30a2aa 346 SUPERFAMILY SSF50129 1 172 2.28E-56 T 14-10-2018 IPR011032 GroES-like superfamily DB29_00947 4c2a5eaa2e6872f2ba4d1aa58e30a2aa 346 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 61 75 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 DB29_00947 4c2a5eaa2e6872f2ba4d1aa58e30a2aa 346 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 25 134 8.6E-33 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 DB29_00947 4c2a5eaa2e6872f2ba4d1aa58e30a2aa 346 SUPERFAMILY SSF51735 138 305 1.69E-34 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_00947 4c2a5eaa2e6872f2ba4d1aa58e30a2aa 346 Gene3D G3DSA:3.40.50.720 152 290 3.5E-109 T 14-10-2018 DB29_00947 4c2a5eaa2e6872f2ba4d1aa58e30a2aa 346 Gene3D G3DSA:3.90.180.10 10 329 3.5E-109 T 14-10-2018 DB29_00947 4c2a5eaa2e6872f2ba4d1aa58e30a2aa 346 Pfam PF00107 Zinc-binding dehydrogenase 175 304 2.3E-23 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 DB29_02416 46286d396bbd58c3025170caf39d1805 142 Pfam PF02082 Transcriptional regulator 1 81 1.7E-20 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type DB29_02416 46286d396bbd58c3025170caf39d1805 142 Gene3D G3DSA:1.10.10.10 1 141 7.0E-54 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_02416 46286d396bbd58c3025170caf39d1805 142 SUPERFAMILY SSF46785 2 137 1.01E-30 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_00601 dfb215b0f110df96c1f9ff9a836f6663 310 Pfam PF00005 ABC transporter 18 160 1.6E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB29_00601 dfb215b0f110df96c1f9ff9a836f6663 310 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB29_00601 dfb215b0f110df96c1f9ff9a836f6663 310 SUPERFAMILY SSF52540 2 221 2.15E-64 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_00601 dfb215b0f110df96c1f9ff9a836f6663 310 Gene3D G3DSA:3.40.50.300 1 235 3.2E-72 T 14-10-2018 DB29_00601 dfb215b0f110df96c1f9ff9a836f6663 310 Pfam PF13732 Domain of unknown function (DUF4162) 227 303 2.3E-6 T 14-10-2018 IPR025302 Domain of unknown function DUF4162 DB29_00601 dfb215b0f110df96c1f9ff9a836f6663 310 SMART SM00382 26 210 1.3E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_01548 5a1c465a61549066c67e49703349499c 241 Gene3D G3DSA:3.10.450.40 104 167 2.5E-6 T 14-10-2018 DB29_01548 5a1c465a61549066c67e49703349499c 241 Gene3D G3DSA:3.10.450.40 168 235 5.6E-16 T 14-10-2018 DB29_01548 5a1c465a61549066c67e49703349499c 241 Gene3D G3DSA:3.10.450.40 29 93 3.1E-6 T 14-10-2018 DB29_01548 5a1c465a61549066c67e49703349499c 241 Pfam PF03413 Peptidase propeptide and YPEB domain 176 231 1.8E-12 T 14-10-2018 IPR025711 PepSY domain DB29_02284 7748b9597f179375b3d858572d1f2f8e 331 SUPERFAMILY SSF53659 6 323 1.23E-96 T 14-10-2018 DB29_02284 7748b9597f179375b3d858572d1f2f8e 331 Pfam PF01515 Phosphate acetyl/butaryl transferase 6 318 4.1E-126 T 14-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 DB29_02284 7748b9597f179375b3d858572d1f2f8e 331 Gene3D G3DSA:3.40.50.10750 142 295 1.7E-133 T 14-10-2018 DB29_02284 7748b9597f179375b3d858572d1f2f8e 331 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 19 318 7.2E-125 T 14-10-2018 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 DB29_02284 7748b9597f179375b3d858572d1f2f8e 331 Gene3D G3DSA:3.40.50.10950 19 318 1.7E-133 T 14-10-2018 DB29_02284 7748b9597f179375b3d858572d1f2f8e 331 PIRSF PIRSF000428 3 326 7.0E-110 T 14-10-2018 IPR012147 Phosphate acetyl/butyryltransferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 DB29_02446 2976085dae914951a6c7d921f251d41a 287 Gene3D G3DSA:3.40.50.10490 99 278 1.4E-30 T 14-10-2018 DB29_02446 2976085dae914951a6c7d921f251d41a 287 Pfam PF01380 SIS domain 129 251 9.2E-16 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 DB29_02446 2976085dae914951a6c7d921f251d41a 287 Gene3D G3DSA:1.10.10.10 1 77 3.9E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_02446 2976085dae914951a6c7d921f251d41a 287 SUPERFAMILY SSF53697 105 278 2.22E-22 T 14-10-2018 DB29_02446 2976085dae914951a6c7d921f251d41a 287 SUPERFAMILY SSF46689 2 78 2.87E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DB29_02446 2976085dae914951a6c7d921f251d41a 287 Pfam PF01418 Helix-turn-helix domain, rpiR family 4 76 2.2E-8 T 14-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 DB29_03545 0415681f5c1f577a636817d132bff4e0 344 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 157 313 3.8E-67 T 14-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DB29_03545 0415681f5c1f577a636817d132bff4e0 344 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 150 157 - T 14-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DB29_03545 0415681f5c1f577a636817d132bff4e0 344 PIRSF PIRSF000149 1 335 2.3E-136 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DB29_03545 0415681f5c1f577a636817d132bff4e0 344 SUPERFAMILY SSF51735 3 168 6.19E-60 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_03545 0415681f5c1f577a636817d132bff4e0 344 Gene3D G3DSA:3.30.360.10 151 315 1.4E-152 T 14-10-2018 DB29_03545 0415681f5c1f577a636817d132bff4e0 344 Gene3D G3DSA:3.40.50.720 4 328 1.4E-152 T 14-10-2018 DB29_03545 0415681f5c1f577a636817d132bff4e0 344 SMART SM00846 3 152 1.4E-87 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DB29_03545 0415681f5c1f577a636817d132bff4e0 344 SUPERFAMILY SSF55347 152 314 3.57E-72 T 14-10-2018 DB29_03545 0415681f5c1f577a636817d132bff4e0 344 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 103 7.2E-36 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DB29_03545 0415681f5c1f577a636817d132bff4e0 344 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 109 122 3.7E-43 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DB29_03545 0415681f5c1f577a636817d132bff4e0 344 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 146 164 3.7E-43 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DB29_03545 0415681f5c1f577a636817d132bff4e0 344 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 173 189 3.7E-43 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DB29_03545 0415681f5c1f577a636817d132bff4e0 344 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 269 284 3.7E-43 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DB29_03545 0415681f5c1f577a636817d132bff4e0 344 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 229 246 3.7E-43 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DB29_03545 0415681f5c1f577a636817d132bff4e0 344 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 325 2.6E-134 T 14-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DB29_03913 ee28c2af57bbab929b0e6699bae7c2ad 453 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 1 450 31.88 T 14-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DB29_03913 ee28c2af57bbab929b0e6699bae7c2ad 453 SUPERFAMILY SSF53623 106 307 2.09E-47 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 DB29_03913 ee28c2af57bbab929b0e6699bae7c2ad 453 Pfam PF08245 Mur ligase middle domain 111 289 1.9E-40 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 DB29_03913 ee28c2af57bbab929b0e6699bae7c2ad 453 Pfam PF01225 Mur ligase family, catalytic domain 25 101 1.3E-8 T 14-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 DB29_03913 ee28c2af57bbab929b0e6699bae7c2ad 453 Gene3D G3DSA:3.40.1390.10 2 80 1.6E-19 T 14-10-2018 DB29_03913 ee28c2af57bbab929b0e6699bae7c2ad 453 SUPERFAMILY SSF53244 311 448 4.88E-33 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 DB29_03913 ee28c2af57bbab929b0e6699bae7c2ad 453 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 29 448 1.5E-125 T 14-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 DB29_03913 ee28c2af57bbab929b0e6699bae7c2ad 453 Gene3D G3DSA:3.40.1190.10 87 307 1.3E-61 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 DB29_03913 ee28c2af57bbab929b0e6699bae7c2ad 453 Gene3D G3DSA:3.90.190.20 309 452 1.3E-36 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 DB29_03913 ee28c2af57bbab929b0e6699bae7c2ad 453 SUPERFAMILY SSF63418 9 102 1.44E-21 T 14-10-2018 IPR035911 MurE/MurF, N-terminal DB29_03913 ee28c2af57bbab929b0e6699bae7c2ad 453 Pfam PF02875 Mur ligase family, glutamate ligase domain 312 392 3.8E-16 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 DB29_03723 b879aacffb7b3633ef38d5f796b0610b 329 Gene3D G3DSA:1.10.240.10 183 293 6.7E-137 T 14-10-2018 DB29_03723 b879aacffb7b3633ef38d5f796b0610b 329 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 1 325 41.636 T 14-10-2018 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2|Reactome: R-HSA-379726 DB29_03723 b879aacffb7b3633ef38d5f796b0610b 329 SUPERFAMILY SSF52374 2 324 3.1E-96 T 14-10-2018 DB29_03723 b879aacffb7b3633ef38d5f796b0610b 329 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 10 19 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 DB29_03723 b879aacffb7b3633ef38d5f796b0610b 329 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 64 83 1.0E-27 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 DB29_03723 b879aacffb7b3633ef38d5f796b0610b 329 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 14 30 1.0E-27 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 DB29_03723 b879aacffb7b3633ef38d5f796b0610b 329 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 139 160 1.0E-27 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 DB29_03723 b879aacffb7b3633ef38d5f796b0610b 329 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 192 202 1.0E-27 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 DB29_03723 b879aacffb7b3633ef38d5f796b0610b 329 Gene3D G3DSA:3.40.50.620 4 323 6.7E-137 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DB29_03723 b879aacffb7b3633ef38d5f796b0610b 329 Pfam PF00579 tRNA synthetases class I (W and Y) 3 281 1.3E-82 T 14-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 DB29_03723 b879aacffb7b3633ef38d5f796b0610b 329 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 2 324 1.9E-116 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 DB29_01050 00de784e9ffca528485a3f1e66972ba5 178 Pfam PF00440 Bacterial regulatory proteins, tetR family 5 48 1.2E-15 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DB29_01050 00de784e9ffca528485a3f1e66972ba5 178 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 5 18 9.1E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DB29_01050 00de784e9ffca528485a3f1e66972ba5 178 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 26 49 9.1E-10 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DB29_01050 00de784e9ffca528485a3f1e66972ba5 178 ProSitePatterns PS01081 TetR-type HTH domain signature. 17 47 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site DB29_01050 00de784e9ffca528485a3f1e66972ba5 178 Gene3D G3DSA:1.10.357.10 47 177 4.4E-8 T 14-10-2018 DB29_01050 00de784e9ffca528485a3f1e66972ba5 178 SUPERFAMILY SSF46689 2 71 3.75E-17 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DB29_01050 00de784e9ffca528485a3f1e66972ba5 178 Gene3D G3DSA:1.10.10.60 1 46 2.0E-19 T 14-10-2018 DB29_02425 48eaf9e256fba91dc693b4f7bd557157 448 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 10 117 1.2E-39 T 14-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 DB29_02425 48eaf9e256fba91dc693b4f7bd557157 448 SUPERFAMILY SSF46548 6 139 5.75E-31 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 DB29_02425 48eaf9e256fba91dc693b4f7bd557157 448 SUPERFAMILY SSF51971 128 373 7.06E-60 T 14-10-2018 DB29_02425 48eaf9e256fba91dc693b4f7bd557157 448 Gene3D G3DSA:1.10.1060.10 1 126 5.7E-41 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 DB29_02425 48eaf9e256fba91dc693b4f7bd557157 448 Gene3D G3DSA:3.50.50.60 233 372 1.3E-38 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB29_02425 48eaf9e256fba91dc693b4f7bd557157 448 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 130 427 4.9E-36 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DB29_02425 48eaf9e256fba91dc693b4f7bd557157 448 PRINTS PR00419 Adrenodoxin reductase family signature 195 205 7.2E-16 T 14-10-2018 DB29_02425 48eaf9e256fba91dc693b4f7bd557157 448 PRINTS PR00419 Adrenodoxin reductase family signature 263 277 7.2E-16 T 14-10-2018 DB29_02425 48eaf9e256fba91dc693b4f7bd557157 448 PRINTS PR00419 Adrenodoxin reductase family signature 130 152 7.2E-16 T 14-10-2018 DB29_02425 48eaf9e256fba91dc693b4f7bd557157 448 PRINTS PR00419 Adrenodoxin reductase family signature 153 166 7.2E-16 T 14-10-2018 DB29_02425 48eaf9e256fba91dc693b4f7bd557157 448 Gene3D G3DSA:3.40.50.720 127 232 1.5E-14 T 14-10-2018 DB29_02239 0939f3c2c0613757d96c8b880085d2a7 729 Pfam PF01751 Toprim domain 5 134 1.4E-13 T 14-10-2018 IPR006171 TOPRIM domain DB29_02239 0939f3c2c0613757d96c8b880085d2a7 729 SMART SM00436 126 216 3.3E-38 T 14-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 DB29_02239 0939f3c2c0613757d96c8b880085d2a7 729 Gene3D G3DSA:3.40.50.140 3 154 2.2E-52 T 14-10-2018 DB29_02239 0939f3c2c0613757d96c8b880085d2a7 729 Gene3D G3DSA:1.10.290.10 272 403 2.5E-140 T 14-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 DB29_02239 0939f3c2c0613757d96c8b880085d2a7 729 SMART SM00437 263 545 4.6E-77 T 14-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 DB29_02239 0939f3c2c0613757d96c8b880085d2a7 729 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 306 315 1.5E-27 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 DB29_02239 0939f3c2c0613757d96c8b880085d2a7 729 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 389 405 1.5E-27 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 DB29_02239 0939f3c2c0613757d96c8b880085d2a7 729 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 508 522 1.5E-27 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 DB29_02239 0939f3c2c0613757d96c8b880085d2a7 729 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 100 113 1.5E-27 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 DB29_02239 0939f3c2c0613757d96c8b880085d2a7 729 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 186 204 1.5E-27 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 DB29_02239 0939f3c2c0613757d96c8b880085d2a7 729 Gene3D G3DSA:1.10.460.10 160 589 2.5E-140 T 14-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 DB29_02239 0939f3c2c0613757d96c8b880085d2a7 729 Gene3D G3DSA:2.70.20.10 210 473 2.5E-140 T 14-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 DB29_02239 0939f3c2c0613757d96c8b880085d2a7 729 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 300 315 - T 14-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 DB29_02239 0939f3c2c0613757d96c8b880085d2a7 729 SMART SM00493 3 126 7.9E-13 T 14-10-2018 IPR006171 TOPRIM domain DB29_02239 0939f3c2c0613757d96c8b880085d2a7 729 Hamap MF_00953 DNA topoisomerase 3 [topB]. 3 634 71.109 T 14-10-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 DB29_02239 0939f3c2c0613757d96c8b880085d2a7 729 TIGRFAM TIGR01056 topB: DNA topoisomerase III 3 724 2.8E-243 T 14-10-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 DB29_02239 0939f3c2c0613757d96c8b880085d2a7 729 SUPERFAMILY SSF56712 4 594 8.63E-170 T 14-10-2018 IPR023405 DNA topoisomerase, type IA, core domain DB29_02239 0939f3c2c0613757d96c8b880085d2a7 729 Pfam PF01131 DNA topoisomerase 153 579 1.9E-116 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 DB29_02843 d7c84f59428063548f8fdc69a39756ae 377 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 137 1.7E-31 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 DB29_02843 d7c84f59428063548f8fdc69a39756ae 377 SUPERFAMILY SSF50129 1 176 3.74E-60 T 14-10-2018 IPR011032 GroES-like superfamily DB29_02843 d7c84f59428063548f8fdc69a39756ae 377 SUPERFAMILY SSF51735 155 338 2.96E-49 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_02843 d7c84f59428063548f8fdc69a39756ae 377 Pfam PF13823 Alcohol dehydrogenase GroES-associated 1 23 1.3E-8 T 14-10-2018 IPR027399 Alcohol dehydrogenase GroES-associated DB29_02843 d7c84f59428063548f8fdc69a39756ae 377 Gene3D G3DSA:3.90.180.10 4 364 2.7E-126 T 14-10-2018 DB29_02843 d7c84f59428063548f8fdc69a39756ae 377 Pfam PF00107 Zinc-binding dehydrogenase 188 255 2.0E-11 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 DB29_02843 d7c84f59428063548f8fdc69a39756ae 377 Gene3D G3DSA:3.40.50.720 168 337 2.7E-126 T 14-10-2018 DB29_02843 d7c84f59428063548f8fdc69a39756ae 377 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 58 72 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 DB29_00461 1f347110c4930f300293fbe6574e3d1a 383 Pfam PF01702 Queuine tRNA-ribosyltransferase 133 369 2.3E-89 T 14-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 DB29_00461 1f347110c4930f300293fbe6574e3d1a 383 SUPERFAMILY SSF51713 5 373 3.92E-159 T 14-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 DB29_00461 1f347110c4930f300293fbe6574e3d1a 383 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 5 372 57.185 T 14-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 DB29_00461 1f347110c4930f300293fbe6574e3d1a 383 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 7 377 2.0E-171 T 14-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 DB29_00461 1f347110c4930f300293fbe6574e3d1a 383 Gene3D G3DSA:3.20.20.105 2 377 1.1E-170 T 14-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 DB29_00461 1f347110c4930f300293fbe6574e3d1a 383 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 7 377 2.3E-181 T 14-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 DB29_03395 fee8e7986e6ec848d8849c64bf83a06d 133 Gene3D G3DSA:2.40.50.140 1 86 1.4E-33 T 14-10-2018 DB29_03395 fee8e7986e6ec848d8849c64bf83a06d 133 SMART SM00316 5 76 1.2E-27 T 14-10-2018 IPR022967 RNA-binding domain, S1 DB29_03395 fee8e7986e6ec848d8849c64bf83a06d 133 SUPERFAMILY SSF50249 4 84 7.26E-26 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DB29_03395 fee8e7986e6ec848d8849c64bf83a06d 133 Pfam PF00575 S1 RNA binding domain 5 76 1.4E-21 T 14-10-2018 IPR003029 S1 domain GO:0003676 DB29_00413 40717d7a58aa374d10519eeb9530f3d8 233 TIGRFAM TIGR01704 MTA/SAH-Nsdase: MTA/SAH nucleosidase 4 228 2.2E-90 T 14-10-2018 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 DB29_00413 40717d7a58aa374d10519eeb9530f3d8 233 Hamap MF_01684 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase [mtnN]. 4 231 44.348 T 14-10-2018 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 DB29_00413 40717d7a58aa374d10519eeb9530f3d8 233 Gene3D G3DSA:3.40.50.1580 2 231 6.5E-63 T 14-10-2018 DB29_00413 40717d7a58aa374d10519eeb9530f3d8 233 SUPERFAMILY SSF53167 4 231 1.14E-67 T 14-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 DB29_00413 40717d7a58aa374d10519eeb9530f3d8 233 Pfam PF01048 Phosphorylase superfamily 4 221 2.2E-49 T 14-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 DB29_02372 3739503aa0b91f926f2aa8e6028e1947 270 SUPERFAMILY SSF54001 5 254 1.74E-46 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily DB29_02372 3739503aa0b91f926f2aa8e6028e1947 270 Gene3D G3DSA:2.40.128.150 87 173 4.1E-28 T 14-10-2018 DB29_02372 3739503aa0b91f926f2aa8e6028e1947 270 Gene3D G3DSA:3.30.2140.10 7 246 4.1E-28 T 14-10-2018 DB29_02372 3739503aa0b91f926f2aa8e6028e1947 270 Pfam PF00797 N-acetyltransferase 20 246 3.1E-17 T 14-10-2018 IPR001447 Arylamine N-acetyltransferase GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 DB29_01132 299226b57a2cdce7b76de472b81ba7a9 147 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 5 136 1.9E-42 T 14-10-2018 IPR006464 N-acetyltransferase RimI/Ard1 GO:0006474|GO:0016407 DB29_01132 299226b57a2cdce7b76de472b81ba7a9 147 SUPERFAMILY SSF55729 3 141 8.14E-35 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase DB29_01132 299226b57a2cdce7b76de472b81ba7a9 147 Gene3D G3DSA:3.40.630.30 1 147 3.5E-46 T 14-10-2018 DB29_01132 299226b57a2cdce7b76de472b81ba7a9 147 Pfam PF00583 Acetyltransferase (GNAT) family 8 116 7.5E-21 T 14-10-2018 IPR000182 GNAT domain DB29_04071 268a1730343e56f818fa9ca7f345c807 430 Pfam PF00675 Insulinase (Peptidase family M16) 63 172 3.9E-16 T 14-10-2018 IPR011765 Peptidase M16, N-terminal DB29_04071 268a1730343e56f818fa9ca7f345c807 430 Gene3D G3DSA:3.30.830.10 7 236 5.4E-59 T 14-10-2018 DB29_04071 268a1730343e56f818fa9ca7f345c807 430 Gene3D G3DSA:3.30.830.10 239 425 6.8E-37 T 14-10-2018 DB29_04071 268a1730343e56f818fa9ca7f345c807 430 SUPERFAMILY SSF63411 13 219 3.67E-41 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 DB29_04071 268a1730343e56f818fa9ca7f345c807 430 SUPERFAMILY SSF63411 249 428 1.43E-17 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 DB29_04071 268a1730343e56f818fa9ca7f345c807 430 Pfam PF05193 Peptidase M16 inactive domain 181 361 2.8E-19 T 14-10-2018 IPR007863 Peptidase M16, C-terminal DB29_01669 07afd0f0fb26e33b67a3f4d6a7db1b18 368 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 333 348 6.3E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DB29_01669 07afd0f0fb26e33b67a3f4d6a7db1b18 368 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 348 364 6.3E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DB29_01669 07afd0f0fb26e33b67a3f4d6a7db1b18 368 Gene3D G3DSA:1.10.10.60 314 368 1.8E-18 T 14-10-2018 DB29_01669 07afd0f0fb26e33b67a3f4d6a7db1b18 368 Gene3D G3DSA:3.40.50.12740 3 166 2.2E-27 T 14-10-2018 DB29_01669 07afd0f0fb26e33b67a3f4d6a7db1b18 368 SMART SM00448 2 116 3.8E-20 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DB29_01669 07afd0f0fb26e33b67a3f4d6a7db1b18 368 SMART SM00342 281 364 1.6E-28 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DB29_01669 07afd0f0fb26e33b67a3f4d6a7db1b18 368 Gene3D G3DSA:1.10.10.60 263 313 1.9E-15 T 14-10-2018 DB29_01669 07afd0f0fb26e33b67a3f4d6a7db1b18 368 SUPERFAMILY SSF52172 2 150 5.12E-27 T 14-10-2018 IPR011006 CheY-like superfamily DB29_01669 07afd0f0fb26e33b67a3f4d6a7db1b18 368 SUPERFAMILY SSF46689 265 315 9.86E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DB29_01669 07afd0f0fb26e33b67a3f4d6a7db1b18 368 Pfam PF12833 Helix-turn-helix domain 287 365 1.1E-21 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DB29_01669 07afd0f0fb26e33b67a3f4d6a7db1b18 368 Pfam PF00072 Response regulator receiver domain 5 113 5.3E-20 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DB29_01669 07afd0f0fb26e33b67a3f4d6a7db1b18 368 SUPERFAMILY SSF46689 317 366 1.21E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DB29_04119 8e5508c0908ecb35e9c32ea924771303 665 TIGRFAM TIGR00232 tktlase_bact: transketolase 9 663 1.9E-294 T 14-10-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 DB29_04119 8e5508c0908ecb35e9c32ea924771303 665 SMART SM00861 353 524 8.1E-70 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain DB29_04119 8e5508c0908ecb35e9c32ea924771303 665 ProSitePatterns PS00802 Transketolase signature 2. 466 482 - T 14-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 DB29_04119 8e5508c0908ecb35e9c32ea924771303 665 SUPERFAMILY SSF52518 5 324 1.9E-122 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold DB29_04119 8e5508c0908ecb35e9c32ea924771303 665 Gene3D G3DSA:3.40.50.970 1 331 1.5E-126 T 14-10-2018 DB29_04119 8e5508c0908ecb35e9c32ea924771303 665 SUPERFAMILY SSF52922 533 664 3.53E-41 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 DB29_04119 8e5508c0908ecb35e9c32ea924771303 665 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 6 337 5.5E-153 T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 DB29_04119 8e5508c0908ecb35e9c32ea924771303 665 Gene3D G3DSA:3.40.50.920 539 665 1.2E-43 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 DB29_04119 8e5508c0908ecb35e9c32ea924771303 665 Pfam PF02779 Transketolase, pyrimidine binding domain 353 523 2.3E-46 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain DB29_04119 8e5508c0908ecb35e9c32ea924771303 665 Gene3D G3DSA:3.40.50.970 332 537 2.0E-79 T 14-10-2018 DB29_04119 8e5508c0908ecb35e9c32ea924771303 665 SUPERFAMILY SSF52518 341 525 2.16E-68 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold DB29_04119 8e5508c0908ecb35e9c32ea924771303 665 ProSitePatterns PS00801 Transketolase signature 1. 14 34 - T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 DB29_04119 8e5508c0908ecb35e9c32ea924771303 665 Pfam PF02780 Transketolase, C-terminal domain 547 655 9.4E-11 T 14-10-2018 IPR033248 Transketolase, C-terminal domain DB29_01187 055bfed7c9493a889672b9a489f224db 160 TIGRFAM TIGR01924 rsbW_low_gc: anti-sigma B factor 3 155 6.3E-65 T 14-10-2018 IPR010193 Serine-protein kinase RsbW GO:0004674|GO:0005524|GO:0006468|GO:0016989|GO:0045892 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 DB29_01187 055bfed7c9493a889672b9a489f224db 160 Hamap MF_00638 Serine-protein kinase RsbW [rsbW]. 1 154 39.135 T 14-10-2018 IPR010193 Serine-protein kinase RsbW GO:0004674|GO:0005524|GO:0006468|GO:0016989|GO:0045892 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 DB29_01187 055bfed7c9493a889672b9a489f224db 160 Gene3D G3DSA:3.30.565.10 3 144 2.5E-25 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB29_01187 055bfed7c9493a889672b9a489f224db 160 Pfam PF13581 Histidine kinase-like ATPase domain 11 138 1.8E-29 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DB29_01187 055bfed7c9493a889672b9a489f224db 160 SUPERFAMILY SSF55874 30 132 1.27E-12 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB29_02936 9ba61a0ade1d2fafa3e35038f00451e3 361 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 131 5.6E-31 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 DB29_02936 9ba61a0ade1d2fafa3e35038f00451e3 361 Pfam PF00107 Zinc-binding dehydrogenase 172 300 1.1E-27 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 DB29_02936 9ba61a0ade1d2fafa3e35038f00451e3 361 SUPERFAMILY SSF51735 137 289 8.55E-38 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_02936 9ba61a0ade1d2fafa3e35038f00451e3 361 SMART SM00829 8 345 6.6E-5 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 DB29_02936 9ba61a0ade1d2fafa3e35038f00451e3 361 Gene3D G3DSA:3.90.180.10 20 325 5.4E-105 T 14-10-2018 DB29_02936 9ba61a0ade1d2fafa3e35038f00451e3 361 Gene3D G3DSA:3.40.50.720 149 286 5.4E-105 T 14-10-2018 DB29_02936 9ba61a0ade1d2fafa3e35038f00451e3 361 SUPERFAMILY SSF50129 2 170 1.83E-48 T 14-10-2018 IPR011032 GroES-like superfamily DB29_02936 9ba61a0ade1d2fafa3e35038f00451e3 361 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 58 72 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 DB29_02056 ee6e6156a546ef957f8ce12ec5d4e1cc 372 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 372 100.634 T 14-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 DB29_02056 ee6e6156a546ef957f8ce12ec5d4e1cc 372 Gene3D G3DSA:3.40.50.300 6 345 4.7E-109 T 14-10-2018 DB29_02056 ee6e6156a546ef957f8ce12ec5d4e1cc 372 ProSitePatterns PS00617 RecF protein signature 1. 116 136 - T 14-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 DB29_02056 ee6e6156a546ef957f8ce12ec5d4e1cc 372 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 348 2.2E-15 T 14-10-2018 IPR003395 RecF/RecN/SMC, N-terminal DB29_02056 ee6e6156a546ef957f8ce12ec5d4e1cc 372 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 1 368 6.0E-124 T 14-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 DB29_02056 ee6e6156a546ef957f8ce12ec5d4e1cc 372 ProSitePatterns PS00618 RecF protein signature 2. 312 330 - T 14-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 DB29_02056 ee6e6156a546ef957f8ce12ec5d4e1cc 372 Gene3D G3DSA:1.20.1050.90 119 311 4.7E-109 T 14-10-2018 DB29_02056 ee6e6156a546ef957f8ce12ec5d4e1cc 372 SUPERFAMILY SSF52540 1 347 3.12E-39 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_02757 936782705d5ebeceaa0ba8e7796744c9 284 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 130 141 - T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 DB29_02757 936782705d5ebeceaa0ba8e7796744c9 284 PIRSF PIRSF001359 1 282 3.6E-85 T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 DB29_02757 936782705d5ebeceaa0ba8e7796744c9 284 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 2 278 2.4E-80 T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 DB29_02757 936782705d5ebeceaa0ba8e7796744c9 284 Gene3D G3DSA:3.20.20.70 1 283 2.6E-93 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DB29_02757 936782705d5ebeceaa0ba8e7796744c9 284 SUPERFAMILY SSF51569 3 278 8.35E-88 T 14-10-2018 DB29_02757 936782705d5ebeceaa0ba8e7796744c9 284 Pfam PF01116 Fructose-bisphosphate aldolase class-II 4 278 8.7E-91 T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 DB29_01444 16d26c48b261f29501fc94900028428f 403 Pfam PF06779 Uncharacterised MFS-type transporter YbfB 20 381 1.1E-73 T 14-10-2018 IPR010645 Uncharacterised MFS-type transporter YbfB DB29_01444 16d26c48b261f29501fc94900028428f 403 SUPERFAMILY SSF103473 9 387 1.83E-34 T 14-10-2018 IPR036259 MFS transporter superfamily DB29_01444 16d26c48b261f29501fc94900028428f 403 Gene3D G3DSA:1.20.1250.20 212 396 8.1E-12 T 14-10-2018 DB29_01444 16d26c48b261f29501fc94900028428f 403 Gene3D G3DSA:1.20.1250.20 1 189 2.6E-12 T 14-10-2018 DB29_00892 9fbefcf54295f8d1473e681279e3bfd1 94 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 3 89 6.0E-17 T 14-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 DB29_00892 9fbefcf54295f8d1473e681279e3bfd1 94 SUPERFAMILY SSF52794 1 90 1.18E-21 T 14-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 DB29_00892 9fbefcf54295f8d1473e681279e3bfd1 94 Gene3D G3DSA:3.40.50.2300 1 89 3.6E-21 T 14-10-2018 DB29_03254 911dcb1cd4b9053f51016fd2bb1c2ab0 250 Pfam PF00583 Acetyltransferase (GNAT) family 143 238 1.3E-13 T 14-10-2018 IPR000182 GNAT domain DB29_03254 911dcb1cd4b9053f51016fd2bb1c2ab0 250 SUPERFAMILY SSF55729 70 245 8.63E-22 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase DB29_03254 911dcb1cd4b9053f51016fd2bb1c2ab0 250 Gene3D G3DSA:3.40.630.30 7 247 3.2E-28 T 14-10-2018 DB29_03617 d1ba1e3c73841038724e526c9ba8393f 423 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 1 405 5.6E-209 T 14-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 DB29_03617 d1ba1e3c73841038724e526c9ba8393f 423 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 2 410 53.11 T 14-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 DB29_03617 d1ba1e3c73841038724e526c9ba8393f 423 SMART SM00382 108 259 2.3E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_03617 d1ba1e3c73841038724e526c9ba8393f 423 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 312 388 1.8E-18 T 14-10-2018 IPR019489 Clp ATPase, C-terminal DB29_03617 d1ba1e3c73841038724e526c9ba8393f 423 SUPERFAMILY SSF57716 11 46 1.71E-11 T 14-10-2018 DB29_03617 d1ba1e3c73841038724e526c9ba8393f 423 SMART SM00994 10 49 8.0E-24 T 14-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 DB29_03617 d1ba1e3c73841038724e526c9ba8393f 423 SUPERFAMILY SSF52540 59 394 1.32E-79 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_03617 d1ba1e3c73841038724e526c9ba8393f 423 Gene3D G3DSA:1.10.8.60 311 414 9.5E-37 T 14-10-2018 DB29_03617 d1ba1e3c73841038724e526c9ba8393f 423 Pfam PF06689 ClpX C4-type zinc finger 12 48 2.6E-20 T 14-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 DB29_03617 d1ba1e3c73841038724e526c9ba8393f 423 Gene3D G3DSA:3.40.50.300 53 310 8.9E-106 T 14-10-2018 DB29_03617 d1ba1e3c73841038724e526c9ba8393f 423 SMART SM01086 312 406 6.4E-34 T 14-10-2018 IPR019489 Clp ATPase, C-terminal DB29_03617 d1ba1e3c73841038724e526c9ba8393f 423 Gene3D G3DSA:3.30.50.30 3 50 1.1E-21 T 14-10-2018 IPR038366 Zinc finger, ClpX C4-type superfamily DB29_03617 d1ba1e3c73841038724e526c9ba8393f 423 Pfam PF07724 AAA domain (Cdc48 subfamily) 109 306 1.3E-50 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 DB29_03348 09c40768442185e56748c6c97b4541c0 162 PIRSF PIRSF000194 1 161 1.0E-54 T 14-10-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0046654|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614 DB29_03348 09c40768442185e56748c6c97b4541c0 162 ProSitePatterns PS00075 Dihydrofolate reductase (DHFR) domain signature. 13 35 - T 14-10-2018 IPR017925 Dihydrofolate reductase conserved site GO:0004146|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-1474151|Reactome: R-HSA-196757|Reactome: R-HSA-539107 DB29_03348 09c40768442185e56748c6c97b4541c0 162 Gene3D G3DSA:3.40.430.10 1 162 8.6E-56 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 DB29_03348 09c40768442185e56748c6c97b4541c0 162 SUPERFAMILY SSF53597 1 159 5.19E-55 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 DB29_03348 09c40768442185e56748c6c97b4541c0 162 Pfam PF00186 Dihydrofolate reductase 1 158 7.9E-58 T 14-10-2018 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0046654|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 DB29_03348 09c40768442185e56748c6c97b4541c0 162 PRINTS PR00070 Dihydrofolate reductase signature 90 104 5.5E-14 T 14-10-2018 DB29_03348 09c40768442185e56748c6c97b4541c0 162 PRINTS PR00070 Dihydrofolate reductase signature 40 51 5.5E-14 T 14-10-2018 DB29_03348 09c40768442185e56748c6c97b4541c0 162 PRINTS PR00070 Dihydrofolate reductase signature 13 23 5.5E-14 T 14-10-2018 DB29_03348 09c40768442185e56748c6c97b4541c0 162 PRINTS PR00070 Dihydrofolate reductase signature 27 35 5.5E-14 T 14-10-2018 DB29_03357 5bd8ccce336a588b19e1968179197634 250 TIGRFAM TIGR01460 HAD-SF-IIA: HAD hydrolase, family IIA 8 226 2.2E-40 T 14-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA DB29_03357 5bd8ccce336a588b19e1968179197634 250 SUPERFAMILY SSF56784 4 248 4.96E-64 T 14-10-2018 IPR036412 HAD-like superfamily DB29_03357 5bd8ccce336a588b19e1968179197634 250 PIRSF PIRSF000915 1 106 5.7E-23 T 14-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA DB29_03357 5bd8ccce336a588b19e1968179197634 250 PIRSF PIRSF000915 98 249 7.9E-32 T 14-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA DB29_03357 5bd8ccce336a588b19e1968179197634 250 Gene3D G3DSA:3.40.50.1000 84 177 8.7E-79 T 14-10-2018 IPR023214 HAD superfamily DB29_03357 5bd8ccce336a588b19e1968179197634 250 Gene3D G3DSA:3.40.50.1000 7 238 8.7E-79 T 14-10-2018 IPR023214 HAD superfamily DB29_03357 5bd8ccce336a588b19e1968179197634 250 Pfam PF13242 HAD-hyrolase-like 176 247 1.4E-16 T 14-10-2018 DB29_03357 5bd8ccce336a588b19e1968179197634 250 Pfam PF13344 Haloacid dehalogenase-like hydrolase 7 102 1.6E-25 T 14-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA DB29_03357 5bd8ccce336a588b19e1968179197634 250 TIGRFAM TIGR01457 HAD-SF-IIA-hyp2: HAD hydrolase, TIGR01457 family 4 248 4.0E-82 T 14-10-2018 IPR006354 HAD-superfamily hydrolase, subfamily IIA, hypothetical 1 DB29_00765 25383e6c0da09a971532ed1549f5b77c 293 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 1.8E-19 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DB29_00765 25383e6c0da09a971532ed1549f5b77c 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 3.2E-10 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DB29_00765 25383e6c0da09a971532ed1549f5b77c 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 3.2E-10 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DB29_00765 25383e6c0da09a971532ed1549f5b77c 293 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 3.2E-10 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DB29_00765 25383e6c0da09a971532ed1549f5b77c 293 Pfam PF03466 LysR substrate binding domain 89 292 6.5E-45 T 14-10-2018 IPR005119 LysR, substrate-binding DB29_00765 25383e6c0da09a971532ed1549f5b77c 293 SUPERFAMILY SSF46785 2 83 7.34E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_00765 25383e6c0da09a971532ed1549f5b77c 293 Gene3D G3DSA:1.10.10.10 2 93 5.5E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_00765 25383e6c0da09a971532ed1549f5b77c 293 SUPERFAMILY SSF53850 91 292 1.86E-45 T 14-10-2018 DB29_00765 25383e6c0da09a971532ed1549f5b77c 293 Gene3D G3DSA:3.40.190.290 94 293 9.7E-40 T 14-10-2018 DB29_00107 fae4ea00e62a817af1ccafefc544f99e 340 Gene3D G3DSA:1.10.1040.10 191 338 6.4E-53 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 DB29_00107 fae4ea00e62a817af1ccafefc544f99e 340 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 190 211 - T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 DB29_00107 fae4ea00e62a817af1ccafefc544f99e 340 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 175 199 2.7E-47 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 DB29_00107 fae4ea00e62a817af1ccafefc544f99e 340 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 135 155 2.7E-47 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 DB29_00107 fae4ea00e62a817af1ccafefc544f99e 340 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 200 224 2.7E-47 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 DB29_00107 fae4ea00e62a817af1ccafefc544f99e 340 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 240 257 2.7E-47 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 DB29_00107 fae4ea00e62a817af1ccafefc544f99e 340 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 56 83 2.7E-47 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 DB29_00107 fae4ea00e62a817af1ccafefc544f99e 340 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 6 23 2.7E-47 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 DB29_00107 fae4ea00e62a817af1ccafefc544f99e 340 SUPERFAMILY SSF51735 3 180 3.95E-57 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_00107 fae4ea00e62a817af1ccafefc544f99e 340 PIRSF PIRSF000114 1 334 2.2E-106 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 DB29_00107 fae4ea00e62a817af1ccafefc544f99e 340 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 3 162 2.5E-53 T 14-10-2018 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 DB29_00107 fae4ea00e62a817af1ccafefc544f99e 340 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 182 321 1.0E-53 T 14-10-2018 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 DB29_00107 fae4ea00e62a817af1ccafefc544f99e 340 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 2 324 38.374 T 14-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 DB29_00107 fae4ea00e62a817af1ccafefc544f99e 340 SUPERFAMILY SSF48179 182 333 2.89E-58 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 DB29_00107 fae4ea00e62a817af1ccafefc544f99e 340 Gene3D G3DSA:3.40.50.720 1 189 1.4E-65 T 14-10-2018 DB29_01943 e3566abf34404b859c6c405857c40c9f 312 SUPERFAMILY SSF53686 3 305 7.73E-104 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme DB29_01943 e3566abf34404b859c6c405857c40c9f 312 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 8 291 2.6E-68 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme DB29_01943 e3566abf34404b859c6c405857c40c9f 312 Gene3D G3DSA:3.40.50.1100 6 299 7.8E-124 T 14-10-2018 DB29_01943 e3566abf34404b859c6c405857c40c9f 312 TIGRFAM TIGR01136 cysKM: cysteine synthase 7 303 9.4E-135 T 14-10-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 DB29_01943 e3566abf34404b859c6c405857c40c9f 312 Gene3D G3DSA:3.40.50.1100 45 143 7.8E-124 T 14-10-2018 DB29_01943 e3566abf34404b859c6c405857c40c9f 312 TIGRFAM TIGR01139 cysK: cysteine synthase A 7 303 7.5E-142 T 14-10-2018 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 DB29_01943 e3566abf34404b859c6c405857c40c9f 312 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 33 51 - T 14-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 DB29_04356 e675d4981e3fbf9438c94c0b96a8d49c 371 Pfam PF03845 Spore germination protein 16 326 1.1E-75 T 14-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 DB29_04356 e675d4981e3fbf9438c94c0b96a8d49c 371 TIGRFAM TIGR00912 2A0309: spore germination protein (amino acid permease) 21 354 9.3E-44 T 14-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 DB29_00489 9d3ada80b5a8cfaa1aa2c71de7fbd8dd 245 SMART SM00382 27 212 3.5E-5 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_00489 9d3ada80b5a8cfaa1aa2c71de7fbd8dd 245 SUPERFAMILY SSF52540 2 224 6.14E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_00489 9d3ada80b5a8cfaa1aa2c71de7fbd8dd 245 Gene3D G3DSA:3.40.50.300 1 244 3.3E-59 T 14-10-2018 DB29_00489 9d3ada80b5a8cfaa1aa2c71de7fbd8dd 245 Pfam PF00005 ABC transporter 18 161 2.7E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB29_00879 63b58712a503a818dbcfb1cd349f6cc0 235 Gene3D G3DSA:3.40.50.300 1 232 1.7E-57 T 14-10-2018 DB29_00879 63b58712a503a818dbcfb1cd349f6cc0 235 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB29_00879 63b58712a503a818dbcfb1cd349f6cc0 235 SMART SM00382 28 215 1.0E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_00879 63b58712a503a818dbcfb1cd349f6cc0 235 Pfam PF00005 ABC transporter 19 165 2.0E-25 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB29_00879 63b58712a503a818dbcfb1cd349f6cc0 235 SUPERFAMILY SSF52540 3 213 1.69E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_00327 ab8ed1fde85b1b8b3e0399a46a559317 160 SUPERFAMILY SSF55486 9 157 3.91E-44 T 14-10-2018 DB29_00327 ab8ed1fde85b1b8b3e0399a46a559317 160 Pfam PF02130 Uncharacterized protein family UPF0054 15 152 1.8E-48 T 14-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 DB29_00327 ab8ed1fde85b1b8b3e0399a46a559317 160 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 1 157 24.596 T 14-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 DB29_00327 ab8ed1fde85b1b8b3e0399a46a559317 160 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 123 133 - T 14-10-2018 IPR020549 Endoribonuclease YbeY, conserved site DB29_00327 ab8ed1fde85b1b8b3e0399a46a559317 160 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 39 154 4.6E-41 T 14-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 DB29_00327 ab8ed1fde85b1b8b3e0399a46a559317 160 Gene3D G3DSA:3.40.390.30 1 159 6.3E-48 T 14-10-2018 IPR023091 Metalloprotease catalytic domain superfamily, predicted GO:0004222 DB29_01406 9373d8207a8a18944c6de1c4f9447a5b 124 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 74 6.6E-11 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DB29_01406 9373d8207a8a18944c6de1c4f9447a5b 124 SUPERFAMILY SSF46785 5 78 7.31E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_01406 9373d8207a8a18944c6de1c4f9447a5b 124 SMART SM00345 15 74 1.9E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DB29_01406 9373d8207a8a18944c6de1c4f9447a5b 124 Gene3D G3DSA:1.10.10.10 8 122 4.3E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_00899 864858cad547e57535425a6ad7551c77 311 Gene3D G3DSA:2.60.200.40 135 291 1.0E-87 T 14-10-2018 DB29_00899 864858cad547e57535425a6ad7551c77 311 Gene3D G3DSA:3.40.50.10330 15 134 1.0E-87 T 14-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 DB29_00899 864858cad547e57535425a6ad7551c77 311 Pfam PF00781 Diacylglycerol kinase catalytic domain 13 137 1.5E-36 T 14-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 DB29_00899 864858cad547e57535425a6ad7551c77 311 SUPERFAMILY SSF111331 10 308 1.0E-83 T 14-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily DB29_00899 864858cad547e57535425a6ad7551c77 311 TIGRFAM TIGR00147 TIGR00147: lipid kinase, YegS/Rv2252/BmrU family 10 306 6.7E-102 T 14-10-2018 IPR005218 Diacylglycerol/lipid kinase DB29_00899 864858cad547e57535425a6ad7551c77 311 SMART SM00046 12 141 4.5E-10 T 14-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 DB29_00286 39e2288333a6d16bb278aa3cd96df214 701 SUPERFAMILY SSF56601 305 681 4.38E-64 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like DB29_00286 39e2288333a6d16bb278aa3cd96df214 701 Gene3D G3DSA:3.90.1310.30 63 564 9.5E-190 T 14-10-2018 DB29_00286 39e2288333a6d16bb278aa3cd96df214 701 Gene3D G3DSA:1.10.10.1230 88 183 9.5E-190 T 14-10-2018 DB29_00286 39e2288333a6d16bb278aa3cd96df214 701 Pfam PF03717 Penicillin-binding Protein dimerisation domain 60 280 5.2E-31 T 14-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 DB29_00286 39e2288333a6d16bb278aa3cd96df214 701 Pfam PF00905 Penicillin binding protein transpeptidase domain 338 671 2.3E-61 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 DB29_00286 39e2288333a6d16bb278aa3cd96df214 701 SUPERFAMILY SSF56519 57 305 1.29E-29 T 14-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 DB29_00286 39e2288333a6d16bb278aa3cd96df214 701 Gene3D G3DSA:3.40.710.10 305 655 9.5E-190 T 14-10-2018 DB29_00946 319349a7cb35e2e061cc01a5844ba9f4 450 Pfam PF02447 GntP family permease 1 448 1.5E-157 T 14-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 DB29_00946 319349a7cb35e2e061cc01a5844ba9f4 450 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 1 450 1.9E-168 T 14-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 DB29_00946 319349a7cb35e2e061cc01a5844ba9f4 450 PIRSF PIRSF002746 1 450 1.1E-156 T 14-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 DB29_00675 6e972c571177fc7387bab94703983d8a 51 Pfam PF08176 Small acid-soluble spore protein K family 1 46 2.0E-22 T 14-10-2018 IPR012611 Small acid-soluble spore protein, SspK GO:0030436|GO:0042601 DB29_00675 6e972c571177fc7387bab94703983d8a 51 Hamap MF_01504 Small, acid-soluble spore protein K [sspK]. 1 48 16.37 T 14-10-2018 IPR012611 Small acid-soluble spore protein, SspK GO:0030436|GO:0042601 DB29_00675 6e972c571177fc7387bab94703983d8a 51 TIGRFAM TIGR03091 SASP_sspK: small, acid-soluble spore protein K 14 46 8.1E-20 T 14-10-2018 IPR012611 Small acid-soluble spore protein, SspK GO:0030436|GO:0042601 DB29_01928 476858a3bcff126e3701b2a70461356a 357 Gene3D G3DSA:1.10.150.20 290 352 8.7E-22 T 14-10-2018 DB29_01928 476858a3bcff126e3701b2a70461356a 357 SUPERFAMILY SSF47781 265 345 6.3E-11 T 14-10-2018 IPR010994 RuvA domain 2-like DB29_01928 476858a3bcff126e3701b2a70461356a 357 Hamap MF_01438 DNA integrity scanning protein DisA [disA]. 1 354 45.693 T 14-10-2018 IPR023763 DNA integrity scanning protein, DisA DB29_01928 476858a3bcff126e3701b2a70461356a 357 Gene3D G3DSA:1.20.1260.110 143 285 1.2E-43 T 14-10-2018 IPR038331 DisA, linker domain superfamily DB29_01928 476858a3bcff126e3701b2a70461356a 357 Pfam PF02457 DisA bacterial checkpoint controller nucleotide-binding 25 136 7.4E-27 T 14-10-2018 IPR003390 DNA integrity scanning protein, DisA, N-terminal DB29_01928 476858a3bcff126e3701b2a70461356a 357 Gene3D G3DSA:3.40.1700.10 7 142 1.8E-55 T 14-10-2018 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily DB29_01928 476858a3bcff126e3701b2a70461356a 357 SUPERFAMILY SSF143597 16 141 5.1E-30 T 14-10-2018 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily DB29_01928 476858a3bcff126e3701b2a70461356a 357 Pfam PF10635 DisA bacterial checkpoint controller linker region 142 280 1.7E-52 T 14-10-2018 IPR018906 DNA integrity scanning, DisA, linker region DB29_01997 ae1a93c8b2f20ace7a73def9e2b7abde 315 SMART SM00933 62 284 1.2E-31 T 14-10-2018 IPR018977 NurA domain DB29_01997 ae1a93c8b2f20ace7a73def9e2b7abde 315 Pfam PF09376 NurA domain 64 284 4.6E-24 T 14-10-2018 IPR018977 NurA domain DB29_01224 1b09828e3d90125099c3bec6bb94d852 548 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 96 118 - T 14-10-2018 IPR023765 Solute-binding protein family 5, conserved site DB29_01224 1b09828e3d90125099c3bec6bb94d852 548 Gene3D G3DSA:3.10.105.10 302 521 1.2E-163 T 14-10-2018 DB29_01224 1b09828e3d90125099c3bec6bb94d852 548 PIRSF PIRSF002741 8 547 4.1E-107 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 DB29_01224 1b09828e3d90125099c3bec6bb94d852 548 SUPERFAMILY SSF53850 45 541 5.57E-127 T 14-10-2018 DB29_01224 1b09828e3d90125099c3bec6bb94d852 548 Gene3D G3DSA:3.90.76.10 80 202 1.2E-163 T 14-10-2018 DB29_01224 1b09828e3d90125099c3bec6bb94d852 548 Gene3D G3DSA:3.40.190.10 60 535 1.2E-163 T 14-10-2018 DB29_01224 1b09828e3d90125099c3bec6bb94d852 548 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 92 471 1.5E-81 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain DB29_04100 83d1661cade323b92897baf2f7a4f368 434 Pfam PF06838 Methionine gamma-lyase 11 411 3.5E-200 T 14-10-2018 IPR009651 Putative methionine gamma-lyase DB29_04100 83d1661cade323b92897baf2f7a4f368 434 Gene3D G3DSA:3.90.1150.60 17 408 1.3E-175 T 14-10-2018 DB29_04100 83d1661cade323b92897baf2f7a4f368 434 Gene3D G3DSA:3.40.640.10 57 269 1.3E-175 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DB29_04100 83d1661cade323b92897baf2f7a4f368 434 SUPERFAMILY SSF53383 45 396 1.13E-44 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DB29_00713 afb0f06ef29506bd72e0d84db5360e9b 306 SUPERFAMILY SSF53613 1 286 1.48E-67 T 14-10-2018 IPR029056 Ribokinase-like DB29_00713 afb0f06ef29506bd72e0d84db5360e9b 306 Pfam PF00294 pfkB family carbohydrate kinase 13 284 2.9E-55 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB DB29_00713 afb0f06ef29506bd72e0d84db5360e9b 306 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 36 60 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 DB29_00713 afb0f06ef29506bd72e0d84db5360e9b 306 Gene3D G3DSA:3.40.1190.20 1 306 1.7E-106 T 14-10-2018 IPR029056 Ribokinase-like DB29_00713 afb0f06ef29506bd72e0d84db5360e9b 306 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 243 256 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 DB29_00713 afb0f06ef29506bd72e0d84db5360e9b 306 TIGRFAM TIGR03828 pfkB: 1-phosphofructokinase 2 300 9.3E-101 T 14-10-2018 IPR022463 Fructose 1-phosphate kinase GO:0008662 KEGG: 00051+2.7.1.56 DB29_00713 afb0f06ef29506bd72e0d84db5360e9b 306 PIRSF PIRSF000535 1 303 2.4E-83 T 14-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 DB29_00713 afb0f06ef29506bd72e0d84db5360e9b 306 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 2 300 1.5E-103 T 14-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 DB29_03933 289b4a0070a7486de69d0776d68cf827 151 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 121 137 2.2E-18 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 DB29_03933 289b4a0070a7486de69d0776d68cf827 151 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 88 103 2.2E-18 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 DB29_03933 289b4a0070a7486de69d0776d68cf827 151 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 44 52 2.2E-18 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 DB29_03933 289b4a0070a7486de69d0776d68cf827 151 ProSitePatterns PS00855 Signal peptidases II signature. 91 103 - T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 DB29_03933 289b4a0070a7486de69d0776d68cf827 151 TIGRFAM TIGR00077 lspA: signal peptidase II 3 147 6.4E-46 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 DB29_03933 289b4a0070a7486de69d0776d68cf827 151 Pfam PF01252 Signal peptidase (SPase) II 6 140 3.7E-38 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 DB29_03933 289b4a0070a7486de69d0776d68cf827 151 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 1 146 16.246 T 14-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 DB29_01660 97549a84b6f009dddcd32d334a0befa1 932 SUPERFAMILY SSF69318 227 807 4.36E-24 T 14-10-2018 DB29_01660 97549a84b6f009dddcd32d334a0befa1 932 SUPERFAMILY SSF49265 36 115 2.81E-6 T 14-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 DB29_01660 97549a84b6f009dddcd32d334a0befa1 932 Gene3D G3DSA:2.60.40.10 123 217 5.8E-25 T 14-10-2018 IPR013783 Immunoglobulin-like fold DB29_01660 97549a84b6f009dddcd32d334a0befa1 932 Gene3D G3DSA:2.60.40.10 31 122 9.2E-8 T 14-10-2018 IPR013783 Immunoglobulin-like fold DB29_04374 1951306a3a60a610ed55359fcb67ad2e 131 PIRSF PIRSF033199 16 131 1.6E-58 T 14-10-2018 IPR014580 Uncharacterised conserved protein UCP033199 DB29_04374 1951306a3a60a610ed55359fcb67ad2e 131 Pfam PF09966 Uncharacterized protein conserved in bacteria (DUF2200) 20 130 5.2E-54 T 14-10-2018 IPR014580 Uncharacterised conserved protein UCP033199 DB29_04374 1951306a3a60a610ed55359fcb67ad2e 131 Gene3D G3DSA:1.10.8.290 14 131 3.3E-56 T 14-10-2018 IPR023204 SP1917 domain superfamily DB29_04106 dc30b33fbeaa271ecd2e4373a9ee58cd 487 Gene3D G3DSA:3.30.70.2740 343 424 1.4E-7 T 14-10-2018 DB29_04106 dc30b33fbeaa271ecd2e4373a9ee58cd 487 Pfam PF01565 FAD binding domain 47 185 4.1E-41 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 DB29_04106 dc30b33fbeaa271ecd2e4373a9ee58cd 487 Pfam PF02913 FAD linked oxidases, C-terminal domain 223 464 5.2E-57 T 14-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 DB29_04106 dc30b33fbeaa271ecd2e4373a9ee58cd 487 SUPERFAMILY SSF56176 22 223 7.01E-68 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 DB29_04106 dc30b33fbeaa271ecd2e4373a9ee58cd 487 SUPERFAMILY SSF55103 226 469 2.94E-61 T 14-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 DB29_04106 dc30b33fbeaa271ecd2e4373a9ee58cd 487 Gene3D G3DSA:3.30.465.40 19 241 1.5E-69 T 14-10-2018 DB29_01483 186bc3adb2509df4747003b195f05b9a 301 SUPERFAMILY SSF48179 164 288 8.96E-34 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 DB29_01483 186bc3adb2509df4747003b195f05b9a 301 Gene3D G3DSA:1.10.1040.10 164 294 9.6E-36 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 DB29_01483 186bc3adb2509df4747003b195f05b9a 301 SUPERFAMILY SSF51735 3 164 9.78E-48 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_01483 186bc3adb2509df4747003b195f05b9a 301 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 7 20 - T 14-10-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 DB29_01483 186bc3adb2509df4747003b195f05b9a 301 TIGRFAM TIGR01505 tartro_sem_red: 2-hydroxy-3-oxopropionate reductase 4 292 2.4E-111 T 14-10-2018 IPR006398 2-hydroxy-3-oxopropionate reductase GO:0008679|GO:0046487|GO:0055114 KEGG: 00630+1.1.1.60 DB29_01483 186bc3adb2509df4747003b195f05b9a 301 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 4 163 2.1E-51 T 14-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 DB29_01483 186bc3adb2509df4747003b195f05b9a 301 PIRSF PIRSF000103 1 292 5.6E-77 T 14-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 DB29_01483 186bc3adb2509df4747003b195f05b9a 301 Gene3D G3DSA:3.40.50.720 1 163 1.1E-55 T 14-10-2018 DB29_01483 186bc3adb2509df4747003b195f05b9a 301 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 166 286 1.3E-33 T 14-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 DB29_04063 f673600a1874fcec372729e3b2c77328 405 ProSitePatterns PS00324 Aspartokinase signature. 5 13 - T 14-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 DB29_04063 f673600a1874fcec372729e3b2c77328 405 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 1 399 1.9E-138 T 14-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 DB29_04063 f673600a1874fcec372729e3b2c77328 405 Pfam PF00696 Amino acid kinase family 2 233 3.9E-48 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 DB29_04063 f673600a1874fcec372729e3b2c77328 405 Gene3D G3DSA:3.40.1160.10 1 252 1.3E-81 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily DB29_04063 f673600a1874fcec372729e3b2c77328 405 SUPERFAMILY SSF55021 257 343 1.45E-12 T 14-10-2018 DB29_04063 f673600a1874fcec372729e3b2c77328 405 SUPERFAMILY SSF53633 3 244 1.83E-66 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily DB29_04063 f673600a1874fcec372729e3b2c77328 405 SUPERFAMILY SSF55021 332 401 9.62E-17 T 14-10-2018 DB29_04063 f673600a1874fcec372729e3b2c77328 405 Pfam PF13840 ACT domain 333 395 8.4E-22 T 14-10-2018 IPR027795 CASTOR, ACT domain DB29_04063 f673600a1874fcec372729e3b2c77328 405 Gene3D G3DSA:3.30.2130.10 253 405 1.2E-35 T 14-10-2018 DB29_04063 f673600a1874fcec372729e3b2c77328 405 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 59 398 9.9E-96 T 14-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 DB29_04063 f673600a1874fcec372729e3b2c77328 405 PIRSF PIRSF000726 1 63 2.9E-11 T 14-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 DB29_04063 f673600a1874fcec372729e3b2c77328 405 PIRSF PIRSF000726 53 405 1.6E-92 T 14-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 DB29_00281 dcf04e3bf100529015fdea8f068c95ef 49 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 1 49 18.688 T 14-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB29_00281 dcf04e3bf100529015fdea8f068c95ef 49 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 3 49 3.1E-20 T 14-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB29_00281 dcf04e3bf100529015fdea8f068c95ef 49 Gene3D G3DSA:2.20.28.120 1 49 1.5E-23 T 14-10-2018 IPR038584 Ribosomal protein L33 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB29_00281 dcf04e3bf100529015fdea8f068c95ef 49 ProSitePatterns PS00582 Ribosomal protein L33 signature. 17 36 - T 14-10-2018 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 DB29_00281 dcf04e3bf100529015fdea8f068c95ef 49 SUPERFAMILY SSF57829 1 49 6.71E-19 T 14-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 DB29_00281 dcf04e3bf100529015fdea8f068c95ef 49 Pfam PF00471 Ribosomal protein L33 3 49 1.5E-22 T 14-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB29_01948 07cc36825a7cc0e872ab22e715ddf225 469 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 5 323 23.704 T 14-10-2018 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 DB29_01948 07cc36825a7cc0e872ab22e715ddf225 469 SUPERFAMILY SSF52402 7 234 2.86E-53 T 14-10-2018 DB29_01948 07cc36825a7cc0e872ab22e715ddf225 469 SMART SM00977 387 461 2.1E-21 T 14-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 DB29_01948 07cc36825a7cc0e872ab22e715ddf225 469 Pfam PF11734 TilS substrate C-terminal domain 389 447 2.6E-12 T 14-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 DB29_01948 07cc36825a7cc0e872ab22e715ddf225 469 Pfam PF01171 PP-loop family 21 204 1.0E-56 T 14-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 DB29_01948 07cc36825a7cc0e872ab22e715ddf225 469 SUPERFAMILY SSF56037 368 453 3.92E-16 T 14-10-2018 DB29_01948 07cc36825a7cc0e872ab22e715ddf225 469 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 21 208 1.8E-55 T 14-10-2018 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 DB29_01948 07cc36825a7cc0e872ab22e715ddf225 469 SUPERFAMILY SSF82829 215 328 9.15E-11 T 14-10-2018 DB29_01948 07cc36825a7cc0e872ab22e715ddf225 469 Gene3D G3DSA:3.40.50.620 1 129 2.3E-39 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DB29_01948 07cc36825a7cc0e872ab22e715ddf225 469 Gene3D G3DSA:1.20.59.30 246 334 5.3E-21 T 14-10-2018 DB29_01948 07cc36825a7cc0e872ab22e715ddf225 469 Gene3D G3DSA:1.10.10.1360 130 216 9.3E-23 T 14-10-2018 DB29_01948 07cc36825a7cc0e872ab22e715ddf225 469 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 387 433 5.3E-18 T 14-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 DB29_01767 5dc3f12ea27e0225d34ffc455c617c0e 433 PIRSF PIRSF006066 4 432 2.7E-146 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 DB29_01767 5dc3f12ea27e0225d34ffc455c617c0e 433 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 20 426 6.0E-124 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 DB29_01767 5dc3f12ea27e0225d34ffc455c617c0e 433 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 10 419 1.2E-109 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit DB29_00369 50ae81ad64650aeb199d595bfb8cd61d 275 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 5 274 5.7E-87 T 14-10-2018 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 DB29_00369 50ae81ad64650aeb199d595bfb8cd61d 275 Gene3D G3DSA:3.40.50.720 101 240 2.8E-96 T 14-10-2018 DB29_00369 50ae81ad64650aeb199d595bfb8cd61d 275 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 2 272 35.144 T 14-10-2018 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 DB29_00369 50ae81ad64650aeb199d595bfb8cd61d 275 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 118 192 6.8E-15 T 14-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase DB29_00369 50ae81ad64650aeb199d595bfb8cd61d 275 SUPERFAMILY SSF53223 2 101 1.21E-35 T 14-10-2018 DB29_00369 50ae81ad64650aeb199d595bfb8cd61d 275 SUPERFAMILY SSF51735 102 270 2.48E-42 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_00369 50ae81ad64650aeb199d595bfb8cd61d 275 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 7 89 5.8E-30 T 14-10-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 DB29_00369 50ae81ad64650aeb199d595bfb8cd61d 275 Gene3D G3DSA:3.40.50.10860 5 261 2.8E-96 T 14-10-2018 DB29_00596 89baf2b44dcd019d451d17efb08dacf9 451 SUPERFAMILY SSF53807 209 450 1.03E-48 T 14-10-2018 DB29_00596 89baf2b44dcd019d451d17efb08dacf9 451 SUPERFAMILY SSF53807 33 160 2.16E-28 T 14-10-2018 DB29_00596 89baf2b44dcd019d451d17efb08dacf9 451 PRINTS PR00691 Adhesin B signature 58 76 2.2E-7 T 14-10-2018 IPR006129 Adhesin B GO:0007155 DB29_00596 89baf2b44dcd019d451d17efb08dacf9 451 PRINTS PR00691 Adhesin B signature 77 96 2.2E-7 T 14-10-2018 IPR006129 Adhesin B GO:0007155 DB29_00596 89baf2b44dcd019d451d17efb08dacf9 451 PRINTS PR00691 Adhesin B signature 33 54 2.2E-7 T 14-10-2018 IPR006129 Adhesin B GO:0007155 DB29_00596 89baf2b44dcd019d451d17efb08dacf9 451 Gene3D G3DSA:3.40.50.1980 33 147 1.4E-30 T 14-10-2018 DB29_00596 89baf2b44dcd019d451d17efb08dacf9 451 Pfam PF01297 Zinc-uptake complex component A periplasmic 36 448 4.5E-59 T 14-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 DB29_00596 89baf2b44dcd019d451d17efb08dacf9 451 PRINTS PR00690 Adhesin family signature 33 51 3.0E-6 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 DB29_00596 89baf2b44dcd019d451d17efb08dacf9 451 PRINTS PR00690 Adhesin family signature 77 94 3.0E-6 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 DB29_00596 89baf2b44dcd019d451d17efb08dacf9 451 PRINTS PR00690 Adhesin family signature 64 77 3.0E-6 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 DB29_00596 89baf2b44dcd019d451d17efb08dacf9 451 Gene3D G3DSA:3.40.50.1980 339 451 1.9E-34 T 14-10-2018 DB29_00596 89baf2b44dcd019d451d17efb08dacf9 451 Gene3D G3DSA:3.40.50.1980 222 336 2.1E-20 T 14-10-2018 DB29_0P0029 fe8e30586b1fe836553fe49d2e4e9a8b 386 Gene3D G3DSA:3.30.420.40 5 210 2.5E-17 T 14-10-2018 DB29_0P0029 fe8e30586b1fe836553fe49d2e4e9a8b 386 SUPERFAMILY SSF53067 210 364 7.37E-12 T 14-10-2018 DB29_0P0029 fe8e30586b1fe836553fe49d2e4e9a8b 386 SUPERFAMILY SSF53067 4 189 9.06E-9 T 14-10-2018 DB29_0P0029 fe8e30586b1fe836553fe49d2e4e9a8b 386 Gene3D G3DSA:3.30.420.40 211 341 7.0E-17 T 14-10-2018 DB29_04249 d5a9364e123675d830cdd4cdb73e46f6 363 SMART SM00028 248 281 47.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DB29_04249 d5a9364e123675d830cdd4cdb73e46f6 363 SMART SM00028 209 242 0.039 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DB29_04249 d5a9364e123675d830cdd4cdb73e46f6 363 SMART SM00028 91 124 300.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DB29_04249 d5a9364e123675d830cdd4cdb73e46f6 363 SMART SM00028 171 204 36.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DB29_04249 d5a9364e123675d830cdd4cdb73e46f6 363 Gene3D G3DSA:1.25.40.10 1 357 2.0E-73 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DB29_04249 d5a9364e123675d830cdd4cdb73e46f6 363 Pfam PF13424 Tetratricopeptide repeat 209 278 8.8E-8 T 14-10-2018 DB29_04249 d5a9364e123675d830cdd4cdb73e46f6 363 SUPERFAMILY SSF48452 210 355 7.59E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DB29_04249 d5a9364e123675d830cdd4cdb73e46f6 363 SUPERFAMILY SSF48452 85 240 1.75E-16 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DB29_01971 222f70dce612cad3eb7238fdfa74835b 185 Pfam PF01195 Peptidyl-tRNA hydrolase 3 185 2.8E-61 T 14-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 DB29_01971 222f70dce612cad3eb7238fdfa74835b 185 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 1 178 37.842 T 14-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 DB29_01971 222f70dce612cad3eb7238fdfa74835b 185 Gene3D G3DSA:3.40.50.1470 1 185 3.9E-72 T 14-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 DB29_01971 222f70dce612cad3eb7238fdfa74835b 185 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 107 117 - T 14-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 DB29_01971 222f70dce612cad3eb7238fdfa74835b 185 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 14 27 - T 14-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 DB29_01971 222f70dce612cad3eb7238fdfa74835b 185 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 1 185 1.3E-69 T 14-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 DB29_01971 222f70dce612cad3eb7238fdfa74835b 185 SUPERFAMILY SSF53178 1 185 2.09E-69 T 14-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 DB29_01646 31b2017db197987382a2448026680bcd 543 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 271 469 1.1E-43 T 14-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 DB29_01646 31b2017db197987382a2448026680bcd 543 Gene3D G3DSA:3.30.420.40 1 262 7.8E-63 T 14-10-2018 DB29_01646 31b2017db197987382a2448026680bcd 543 Gene3D G3DSA:3.30.420.40 263 533 8.3E-85 T 14-10-2018 DB29_01646 31b2017db197987382a2448026680bcd 543 SUPERFAMILY SSF53067 31 264 7.77E-35 T 14-10-2018 DB29_01646 31b2017db197987382a2448026680bcd 543 Hamap MF_00520 Ribulokinase [araB]. 1 530 52.162 T 14-10-2018 IPR005929 Ribulokinase GO:0005524|GO:0008741|GO:0019569 KEGG: 00040+2.7.1.16 DB29_01646 31b2017db197987382a2448026680bcd 543 PIRSF PIRSF000538 28 520 3.1E-61 T 14-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 DB29_01646 31b2017db197987382a2448026680bcd 543 TIGRFAM TIGR01234 L-ribulokinase: ribulokinase 1 523 2.4E-214 T 14-10-2018 IPR005929 Ribulokinase GO:0005524|GO:0008741|GO:0019569 KEGG: 00040+2.7.1.16 DB29_01646 31b2017db197987382a2448026680bcd 543 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 34 258 1.7E-13 T 14-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 DB29_01646 31b2017db197987382a2448026680bcd 543 SUPERFAMILY SSF53067 263 519 2.59E-54 T 14-10-2018 DB29_02627 184eba371dd930c4138de8a7b1a8a2c7 496 Gene3D G3DSA:3.30.70.2230 218 376 2.6E-7 T 14-10-2018 DB29_01964 8511d2a75779db5bbcb1ba581914137c 533 Pfam PF01943 Polysaccharide biosynthesis protein 10 308 3.0E-32 T 14-10-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 DB29_01964 8511d2a75779db5bbcb1ba581914137c 533 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 360 507 3.2E-19 T 14-10-2018 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain DB29_01964 8511d2a75779db5bbcb1ba581914137c 533 PIRSF PIRSF038958 6 525 2.9E-66 T 14-10-2018 IPR024923 Peptidoglycan biosynthesis protein, SpoVB-type DB29_03179 acb8bf6f9c430d61da930d4fa661be43 496 TIGRFAM TIGR01322 scrB_fam: sucrose-6-phosphate hydrolase 24 465 8.6E-146 T 14-10-2018 IPR006232 Sucrose-6-phosphate hydrolase GO:0004564|GO:0005737|GO:0005975 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26 DB29_03179 acb8bf6f9c430d61da930d4fa661be43 496 Pfam PF00251 Glycosyl hydrolases family 32 N-terminal domain 36 338 9.5E-109 T 14-10-2018 IPR013148 Glycosyl hydrolase family 32, N-terminal DB29_03179 acb8bf6f9c430d61da930d4fa661be43 496 Gene3D G3DSA:2.115.10.20 2 352 6.6E-131 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily DB29_03179 acb8bf6f9c430d61da930d4fa661be43 496 Pfam PF08244 Glycosyl hydrolases family 32 C terminal 365 488 7.5E-30 T 14-10-2018 IPR013189 Glycosyl hydrolase family 32, C-terminal DB29_03179 acb8bf6f9c430d61da930d4fa661be43 496 SMART SM00640 36 454 3.5E-158 T 14-10-2018 IPR001362 Glycoside hydrolase, family 32 GO:0004553|GO:0005975 DB29_03179 acb8bf6f9c430d61da930d4fa661be43 496 SUPERFAMILY SSF75005 30 338 9.74E-117 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily DB29_03179 acb8bf6f9c430d61da930d4fa661be43 496 Gene3D G3DSA:2.60.120.560 355 495 1.9E-36 T 14-10-2018 DB29_03179 acb8bf6f9c430d61da930d4fa661be43 496 SUPERFAMILY SSF49899 338 494 5.38E-37 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily DB29_01489 52b9a66c8bbcd2506e26071c64acdfde 216 Pfam PF00392 Bacterial regulatory proteins, gntR family 2 56 5.0E-14 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DB29_01489 52b9a66c8bbcd2506e26071c64acdfde 216 SUPERFAMILY SSF48008 66 208 1.54E-25 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DB29_01489 52b9a66c8bbcd2506e26071c64acdfde 216 Gene3D G3DSA:1.10.10.10 1 61 5.3E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_01489 52b9a66c8bbcd2506e26071c64acdfde 216 SUPERFAMILY SSF46785 2 64 1.3E-14 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_01489 52b9a66c8bbcd2506e26071c64acdfde 216 Gene3D G3DSA:1.20.120.530 64 211 4.7E-31 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DB29_01489 52b9a66c8bbcd2506e26071c64acdfde 216 SMART SM00345 3 60 2.6E-12 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DB29_01489 52b9a66c8bbcd2506e26071c64acdfde 216 SMART SM00895 70 200 3.7E-23 T 14-10-2018 IPR011711 GntR, C-terminal DB29_01489 52b9a66c8bbcd2506e26071c64acdfde 216 Pfam PF07729 FCD domain 70 198 4.0E-25 T 14-10-2018 IPR011711 GntR, C-terminal DB29_02692 0be5eadadfc6d2114dbce202beec78e3 594 Gene3D G3DSA:3.40.50.300 340 591 2.7E-90 T 14-10-2018 DB29_02692 0be5eadadfc6d2114dbce202beec78e3 594 ProSitePatterns PS00211 ABC transporters family signature. 485 499 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB29_02692 0be5eadadfc6d2114dbce202beec78e3 594 Pfam PF00005 ABC transporter 363 513 7.7E-36 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB29_02692 0be5eadadfc6d2114dbce202beec78e3 594 Pfam PF00664 ABC transporter transmembrane region 29 293 6.0E-43 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 DB29_02692 0be5eadadfc6d2114dbce202beec78e3 594 SMART SM00382 372 553 6.3E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_02692 0be5eadadfc6d2114dbce202beec78e3 594 Gene3D G3DSA:1.20.1560.10 4 327 8.2E-78 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DB29_02692 0be5eadadfc6d2114dbce202beec78e3 594 SUPERFAMILY SSF52540 343 584 2.78E-86 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_02692 0be5eadadfc6d2114dbce202beec78e3 594 SUPERFAMILY SSF90123 17 322 1.31E-70 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DB29_01973 5d3c0cd168c1c0c9c9ca32961912ee12 316 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 10 316 1.1E-128 T 14-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 DB29_01973 5d3c0cd168c1c0c9c9ca32961912ee12 316 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 133 148 - T 14-10-2018 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 DB29_01973 5d3c0cd168c1c0c9c9ca32961912ee12 316 Gene3D G3DSA:3.40.50.2020 152 292 6.8E-125 T 14-10-2018 DB29_01973 5d3c0cd168c1c0c9c9ca32961912ee12 316 SUPERFAMILY SSF53271 74 307 2.21E-65 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like DB29_01973 5d3c0cd168c1c0c9c9ca32961912ee12 316 Gene3D G3DSA:3.40.50.2020 12 304 6.8E-125 T 14-10-2018 DB29_01973 5d3c0cd168c1c0c9c9ca32961912ee12 316 Pfam PF14572 Phosphoribosyl synthetase-associated domain 207 315 4.7E-26 T 14-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 DB29_01973 5d3c0cd168c1c0c9c9ca32961912ee12 316 Hamap MF_00583_B Putative ribose-phosphate pyrophosphokinase [prs]. 9 316 51.075 T 14-10-2018 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type GO:0004749 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 DB29_01973 5d3c0cd168c1c0c9c9ca32961912ee12 316 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 9 125 1.4E-50 T 14-10-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 DB29_01973 5d3c0cd168c1c0c9c9ca32961912ee12 316 SMART SM01400 9 125 1.9E-79 T 14-10-2018 DB29_01296 a01a46dc76552247cf5b43e3fcf7fdb8 408 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 74 83 - T 14-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 DB29_01296 a01a46dc76552247cf5b43e3fcf7fdb8 408 Pfam PF01546 Peptidase family M20/M25/M40 138 400 7.9E-15 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 DB29_01296 a01a46dc76552247cf5b43e3fcf7fdb8 408 Hamap MF_00550 Peptidase T [pepT]. 2 403 57.034 T 14-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 DB29_01296 a01a46dc76552247cf5b43e3fcf7fdb8 408 TIGRFAM TIGR01882 peptidase-T: peptidase T 3 407 3.3E-187 T 14-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 DB29_01296 a01a46dc76552247cf5b43e3fcf7fdb8 408 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 137 176 - T 14-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 DB29_01296 a01a46dc76552247cf5b43e3fcf7fdb8 408 Gene3D G3DSA:3.40.630.10 5 399 1.5E-182 T 14-10-2018 DB29_01296 a01a46dc76552247cf5b43e3fcf7fdb8 408 Pfam PF07687 Peptidase dimerisation domain 206 298 6.7E-11 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain DB29_01296 a01a46dc76552247cf5b43e3fcf7fdb8 408 SUPERFAMILY SSF55031 208 319 2.99E-41 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain DB29_01296 a01a46dc76552247cf5b43e3fcf7fdb8 408 Gene3D G3DSA:3.30.70.360 208 318 1.5E-182 T 14-10-2018 DB29_01296 a01a46dc76552247cf5b43e3fcf7fdb8 408 PIRSF PIRSF037215 1 407 6.3E-188 T 14-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 DB29_01296 a01a46dc76552247cf5b43e3fcf7fdb8 408 SUPERFAMILY SSF53187 3 404 2.62E-78 T 14-10-2018 DB29_03920 8dfc1f69e8112b41caa0bc17b409b7b8 373 ProSitePatterns PS01135 FtsZ protein signature 2. 97 118 - T 14-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 DB29_03920 8dfc1f69e8112b41caa0bc17b409b7b8 373 SMART SM00864 13 205 2.0E-121 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 DB29_03920 8dfc1f69e8112b41caa0bc17b409b7b8 373 Gene3D G3DSA:3.30.1330.20 221 333 4.8E-42 T 14-10-2018 IPR037103 Tubulin/FtsZ, C-terminal domain superfamily Reactome: R-HSA-380320 DB29_03920 8dfc1f69e8112b41caa0bc17b409b7b8 373 Pfam PF12327 FtsZ family, C-terminal domain 222 316 3.8E-33 T 14-10-2018 IPR024757 Cell division protein FtsZ, C-terminal DB29_03920 8dfc1f69e8112b41caa0bc17b409b7b8 373 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 9 336 2.3E-141 T 14-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 DB29_03920 8dfc1f69e8112b41caa0bc17b409b7b8 373 SUPERFAMILY SSF55307 204 318 3.2E-44 T 14-10-2018 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 DB29_03920 8dfc1f69e8112b41caa0bc17b409b7b8 373 SUPERFAMILY SSF52490 12 208 1.06E-72 T 14-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 DB29_03920 8dfc1f69e8112b41caa0bc17b409b7b8 373 Gene3D G3DSA:3.40.50.1440 4 220 1.3E-85 T 14-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 DB29_03920 8dfc1f69e8112b41caa0bc17b409b7b8 373 PRINTS PR00423 Cell division protein FtsZ signature 98 118 2.8E-53 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 DB29_03920 8dfc1f69e8112b41caa0bc17b409b7b8 373 PRINTS PR00423 Cell division protein FtsZ signature 189 211 2.8E-53 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 DB29_03920 8dfc1f69e8112b41caa0bc17b409b7b8 373 PRINTS PR00423 Cell division protein FtsZ signature 126 147 2.8E-53 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 DB29_03920 8dfc1f69e8112b41caa0bc17b409b7b8 373 PRINTS PR00423 Cell division protein FtsZ signature 212 233 2.8E-53 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 DB29_03920 8dfc1f69e8112b41caa0bc17b409b7b8 373 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 13 173 4.1E-44 T 14-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 DB29_03920 8dfc1f69e8112b41caa0bc17b409b7b8 373 ProSitePatterns PS01134 FtsZ protein signature 1. 44 78 - T 14-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 DB29_03920 8dfc1f69e8112b41caa0bc17b409b7b8 373 SMART SM00865 207 324 1.6E-55 T 14-10-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-380320 DB29_03920 8dfc1f69e8112b41caa0bc17b409b7b8 373 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 9 362 39.676 T 14-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 DB29_00050 9b224c83eacb37cf31947b8af42804b9 267 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 135 226 1.1E-13 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DB29_00050 9b224c83eacb37cf31947b8af42804b9 267 Gene3D G3DSA:3.40.50.1000 3 255 2.0E-51 T 14-10-2018 IPR023214 HAD superfamily DB29_00050 9b224c83eacb37cf31947b8af42804b9 267 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 166 232 2.0E-8 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DB29_00050 9b224c83eacb37cf31947b8af42804b9 267 Pfam PF13419 Haloacid dehalogenase-like hydrolase 5 232 1.6E-23 T 14-10-2018 DB29_00050 9b224c83eacb37cf31947b8af42804b9 267 Gene3D G3DSA:1.20.120.710 15 131 2.0E-51 T 14-10-2018 DB29_00050 9b224c83eacb37cf31947b8af42804b9 267 SUPERFAMILY SSF56784 1 259 3.02E-40 T 14-10-2018 IPR036412 HAD-like superfamily DB29_02006 7769930c289c7f1a4e55638066d7491e 213 Gene3D G3DSA:3.40.50.300 1 209 4.6E-67 T 14-10-2018 DB29_02006 7769930c289c7f1a4e55638066d7491e 213 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 1 196 5.3E-60 T 14-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 DB29_02006 7769930c289c7f1a4e55638066d7491e 213 Pfam PF02223 Thymidylate kinase 9 197 8.5E-55 T 14-10-2018 IPR039430 Thymidylate kinase-like domain KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 DB29_02006 7769930c289c7f1a4e55638066d7491e 213 ProSitePatterns PS01331 Thymidylate kinase signature. 94 106 - T 14-10-2018 IPR018095 Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 DB29_02006 7769930c289c7f1a4e55638066d7491e 213 Hamap MF_00165 Thymidylate kinase [tmk]. 5 208 31.107 T 14-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 DB29_02006 7769930c289c7f1a4e55638066d7491e 213 SUPERFAMILY SSF52540 1 207 1.13E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_04175 708e3438b780b04eff24937613a60e8e 943 Gene3D G3DSA:3.40.50.970 152 534 2.1E-133 T 14-10-2018 DB29_04175 708e3438b780b04eff24937613a60e8e 943 PIRSF PIRSF000157 1 941 0.0 T 14-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 DB29_04175 708e3438b780b04eff24937613a60e8e 943 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 16 937 0.0 T 14-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 DB29_04175 708e3438b780b04eff24937613a60e8e 943 SUPERFAMILY SSF52518 149 529 5.89E-74 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold DB29_04175 708e3438b780b04eff24937613a60e8e 943 Hamap MF_01169 2-oxoglutarate dehydrogenase E1 component [odhA]. 2 941 23.943 T 14-10-2018 IPR023784 2-oxoglutarate dehydrogenase E1 component, bacterial KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 DB29_04175 708e3438b780b04eff24937613a60e8e 943 Gene3D G3DSA:3.40.50.12470 557 806 1.0E-153 T 14-10-2018 DB29_04175 708e3438b780b04eff24937613a60e8e 943 SUPERFAMILY SSF52518 576 796 1.37E-43 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold DB29_04175 708e3438b780b04eff24937613a60e8e 943 Pfam PF02779 Transketolase, pyrimidine binding domain 594 790 1.2E-54 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain DB29_04175 708e3438b780b04eff24937613a60e8e 943 Pfam PF00676 Dehydrogenase E1 component 219 530 8.8E-70 T 14-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 DB29_04175 708e3438b780b04eff24937613a60e8e 943 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 795 938 4.4E-42 T 14-10-2018 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 DB29_04175 708e3438b780b04eff24937613a60e8e 943 SMART SM00861 594 790 2.2E-44 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain DB29_04175 708e3438b780b04eff24937613a60e8e 943 Gene3D G3DSA:3.40.50.11610 724 936 1.0E-153 T 14-10-2018 DB29_02464 e721be914b2e726179e5218f3a9a325c 749 TIGRFAM TIGR03196 pucD: xanthine dehydrogenase D subunit 4 729 1.2E-284 T 14-10-2018 IPR017609 Xanthine dehydrogenase D subunit KEGG: 00230+1.17.1.4|MetaCyc: PWY-5497|MetaCyc: PWY-5695|MetaCyc: PWY-6538|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-6999 DB29_02464 e721be914b2e726179e5218f3a9a325c 749 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 138 672 1.2E-137 T 14-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 DB29_02464 e721be914b2e726179e5218f3a9a325c 749 Gene3D G3DSA:3.30.365.10 13 269 1.0E-114 T 14-10-2018 DB29_02464 e721be914b2e726179e5218f3a9a325c 749 Gene3D G3DSA:3.30.365.10 432 588 1.2E-80 T 14-10-2018 DB29_02464 e721be914b2e726179e5218f3a9a325c 749 SMART SM01008 15 121 1.3E-47 T 14-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead DB29_02464 e721be914b2e726179e5218f3a9a325c 749 SUPERFAMILY SSF56003 125 735 3.53E-159 T 14-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 DB29_02464 e721be914b2e726179e5218f3a9a325c 749 Gene3D G3DSA:3.30.365.10 356 728 1.2E-80 T 14-10-2018 DB29_02464 e721be914b2e726179e5218f3a9a325c 749 Gene3D G3DSA:3.30.365.10 122 345 1.0E-114 T 14-10-2018 DB29_02464 e721be914b2e726179e5218f3a9a325c 749 SUPERFAMILY SSF54665 3 140 1.13E-40 T 14-10-2018 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily DB29_02464 e721be914b2e726179e5218f3a9a325c 749 Gene3D G3DSA:3.90.1170.50 30 121 1.0E-114 T 14-10-2018 DB29_02464 e721be914b2e726179e5218f3a9a325c 749 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 15 121 1.6E-30 T 14-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead DB29_04058 3ee21cf7824cd6855c4c13c4f186b000 414 Pfam PF05193 Peptidase M16 inactive domain 166 338 4.1E-36 T 14-10-2018 IPR007863 Peptidase M16, C-terminal DB29_04058 3ee21cf7824cd6855c4c13c4f186b000 414 Pfam PF00675 Insulinase (Peptidase family M16) 13 159 1.1E-44 T 14-10-2018 IPR011765 Peptidase M16, N-terminal DB29_04058 3ee21cf7824cd6855c4c13c4f186b000 414 Gene3D G3DSA:3.30.830.10 1 212 3.6E-79 T 14-10-2018 DB29_04058 3ee21cf7824cd6855c4c13c4f186b000 414 Gene3D G3DSA:3.30.830.10 220 411 5.7E-49 T 14-10-2018 DB29_04058 3ee21cf7824cd6855c4c13c4f186b000 414 SUPERFAMILY SSF63411 219 402 3.03E-44 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 DB29_04058 3ee21cf7824cd6855c4c13c4f186b000 414 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 33 56 - T 14-10-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 DB29_04058 3ee21cf7824cd6855c4c13c4f186b000 414 SUPERFAMILY SSF63411 3 217 1.99E-59 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 DB29_03688 da1d24087607917b6a9b9c97c235ad70 163 Pfam PF12690 Intracellular proteinase inhibitor 56 133 4.0E-23 T 14-10-2018 IPR020481 Intracellular proteinase inhibitor BsuPI DB29_03688 da1d24087607917b6a9b9c97c235ad70 163 ProDom PD076312 INHIBITOR INTRACELLULAR PROTEINASE PRECURSOR SIGNAL DOMAIN SLH S-LAYER PROTEASE BSUPI 43 134 1.0E-47 T 14-10-2018 IPR020481 Intracellular proteinase inhibitor BsuPI DB29_03688 da1d24087607917b6a9b9c97c235ad70 163 Gene3D G3DSA:2.60.40.2360 38 155 1.5E-28 T 14-10-2018 IPR038144 Intracellular proteinase inhibitor DB29_00936 ab428b69e39d5bc0ab4910f6d7f98465 127 Pfam PF16888 Domain of unknown function (DUF5082) 5 124 1.5E-36 T 14-10-2018 IPR031681 Protein of unknown function DUF5082 DB29_00936 ab428b69e39d5bc0ab4910f6d7f98465 127 ProDom PD338809 BH2346 YXIB BH4015 BH0976 PREFOLDIN 17 108 3.0E-47 T 14-10-2018 DB29_03373 df62dd9ad0b3435535bea20b7108491a 280 Gene3D G3DSA:3.40.190.10 129 231 1.4E-59 T 14-10-2018 DB29_03373 df62dd9ad0b3435535bea20b7108491a 280 Gene3D G3DSA:3.40.190.10 44 263 1.4E-59 T 14-10-2018 DB29_03373 df62dd9ad0b3435535bea20b7108491a 280 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 46 266 2.1E-46 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DB29_03373 df62dd9ad0b3435535bea20b7108491a 280 SMART SM00062 45 268 9.0E-46 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DB29_03373 df62dd9ad0b3435535bea20b7108491a 280 SUPERFAMILY SSF53850 1 266 8.89E-52 T 14-10-2018 DB29_01751 3609b7542467c5b221c6fa242fc21bdd 462 PRINTS PR00131 Glycosyl hydrolase family 1 signature 361 369 1.9E-16 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DB29_01751 3609b7542467c5b221c6fa242fc21bdd 462 PRINTS PR00131 Glycosyl hydrolase family 1 signature 290 304 1.9E-16 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DB29_01751 3609b7542467c5b221c6fa242fc21bdd 462 PRINTS PR00131 Glycosyl hydrolase family 1 signature 430 442 1.9E-16 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DB29_01751 3609b7542467c5b221c6fa242fc21bdd 462 PRINTS PR00131 Glycosyl hydrolase family 1 signature 385 396 1.9E-16 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DB29_01751 3609b7542467c5b221c6fa242fc21bdd 462 PRINTS PR00131 Glycosyl hydrolase family 1 signature 406 423 1.9E-16 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DB29_01751 3609b7542467c5b221c6fa242fc21bdd 462 Pfam PF00232 Glycosyl hydrolase family 1 5 462 2.4E-139 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DB29_01751 3609b7542467c5b221c6fa242fc21bdd 462 Gene3D G3DSA:3.20.20.80 5 461 4.2E-154 T 14-10-2018 DB29_01751 3609b7542467c5b221c6fa242fc21bdd 462 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 361 369 - T 14-10-2018 IPR018120 Glycoside hydrolase family 1, active site DB29_01751 3609b7542467c5b221c6fa242fc21bdd 462 SUPERFAMILY SSF51445 2 458 2.93E-163 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily DB29_00842 be50ba037193d7ada8969d586d5778dd 523 SUPERFAMILY SSF49899 320 520 6.33E-51 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily DB29_00842 be50ba037193d7ada8969d586d5778dd 523 SUPERFAMILY SSF75005 4 316 2.43E-101 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily DB29_00842 be50ba037193d7ada8969d586d5778dd 523 Gene3D G3DSA:2.115.10.20 3 318 2.6E-105 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily DB29_00842 be50ba037193d7ada8969d586d5778dd 523 Gene3D G3DSA:2.60.120.200 321 522 1.1E-55 T 14-10-2018 DB29_00842 be50ba037193d7ada8969d586d5778dd 523 Pfam PF04616 Glycosyl hydrolases family 43 4 295 8.6E-103 T 14-10-2018 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 DB29_03805 6dbb3e54d683848f5bb3953cd4c7e34c 628 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 2 622 45.502 T 14-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 DB29_03805 6dbb3e54d683848f5bb3953cd4c7e34c 628 Gene3D G3DSA:3.40.50.970 314 487 7.5E-65 T 14-10-2018 DB29_03805 6dbb3e54d683848f5bb3953cd4c7e34c 628 SUPERFAMILY SSF52518 312 502 4.21E-57 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold DB29_03805 6dbb3e54d683848f5bb3953cd4c7e34c 628 SUPERFAMILY SSF52518 4 377 7.11E-74 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold DB29_03805 6dbb3e54d683848f5bb3953cd4c7e34c 628 Pfam PF02780 Transketolase, C-terminal domain 492 613 1.3E-30 T 14-10-2018 IPR033248 Transketolase, C-terminal domain DB29_03805 6dbb3e54d683848f5bb3953cd4c7e34c 628 Pfam PF02779 Transketolase, pyrimidine binding domain 316 476 2.3E-38 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain DB29_03805 6dbb3e54d683848f5bb3953cd4c7e34c 628 Gene3D G3DSA:3.40.50.920 492 624 6.3E-39 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 DB29_03805 6dbb3e54d683848f5bb3953cd4c7e34c 628 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 3 278 1.1E-118 T 14-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 DB29_03805 6dbb3e54d683848f5bb3953cd4c7e34c 628 SMART SM00861 315 480 1.7E-66 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain DB29_03805 6dbb3e54d683848f5bb3953cd4c7e34c 628 ProSitePatterns PS00802 Transketolase signature 2. 421 437 - T 14-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 DB29_03805 6dbb3e54d683848f5bb3953cd4c7e34c 628 ProSitePatterns PS00801 Transketolase signature 1. 28 47 - T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 DB29_03805 6dbb3e54d683848f5bb3953cd4c7e34c 628 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 4 621 1.1E-279 T 14-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 DB29_03805 6dbb3e54d683848f5bb3953cd4c7e34c 628 SUPERFAMILY SSF52922 489 621 5.37E-33 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 DB29_00954 051bfbcadafa17e3a917191c978a0f91 194 Pfam PF00551 Formyl transferase 1 181 2.8E-55 T 14-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 DB29_00954 051bfbcadafa17e3a917191c978a0f91 194 Gene3D G3DSA:3.40.50.170 1 194 1.1E-73 T 14-10-2018 DB29_00954 051bfbcadafa17e3a917191c978a0f91 194 SUPERFAMILY SSF53328 1 190 1.31E-58 T 14-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 DB29_00954 051bfbcadafa17e3a917191c978a0f91 194 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 2 187 30.764 T 14-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 DB29_00954 051bfbcadafa17e3a917191c978a0f91 194 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 1 189 1.4E-65 T 14-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 DB29_00954 051bfbcadafa17e3a917191c978a0f91 194 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 133 156 - T 14-10-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 DB29_01667 97f46fe8a5fecd7a3d645c28f2f21cb8 314 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 104 304 4.5E-14 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DB29_01667 97f46fe8a5fecd7a3d645c28f2f21cb8 314 Gene3D G3DSA:1.10.3720.10 67 307 1.1E-65 T 14-10-2018 IPR035906 MetI-like superfamily DB29_01667 97f46fe8a5fecd7a3d645c28f2f21cb8 314 SUPERFAMILY SSF161098 71 296 5.36E-56 T 14-10-2018 IPR035906 MetI-like superfamily DB29_01425 92fb8c963379e5119b995739e4bd3df3 182 SUPERFAMILY SSF46785 3 172 3.15E-26 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_01425 92fb8c963379e5119b995739e4bd3df3 182 Gene3D G3DSA:1.10.10.10 1 96 4.2E-14 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_01425 92fb8c963379e5119b995739e4bd3df3 182 Pfam PF03551 Transcriptional regulator PadR-like family 6 82 1.4E-8 T 14-10-2018 IPR005149 Transcription regulator PadR, N-terminal DB29_02038 a215249bf5e860a0ed463ff31fab014e 38 Pfam PF13129 Protein of unknown function (DUF3953) 1 34 2.5E-14 T 14-10-2018 IPR025018 Protein of unknown function DUF3953 DB29_03593 faa94e6cdd63b70f798dce0f89edf974 87 PRINTS PR00107 Phosphocarrier protein signature 38 53 7.0E-25 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like DB29_03593 faa94e6cdd63b70f798dce0f89edf974 87 PRINTS PR00107 Phosphocarrier protein signature 53 70 7.0E-25 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like DB29_03593 faa94e6cdd63b70f798dce0f89edf974 87 PRINTS PR00107 Phosphocarrier protein signature 13 29 7.0E-25 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like DB29_03593 faa94e6cdd63b70f798dce0f89edf974 87 Gene3D G3DSA:3.30.1340.10 1 87 1.6E-36 T 14-10-2018 IPR035895 HPr-like superfamily DB29_03593 faa94e6cdd63b70f798dce0f89edf974 87 Pfam PF00381 PTS HPr component phosphorylation site 3 82 8.3E-32 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like DB29_03593 faa94e6cdd63b70f798dce0f89edf974 87 SUPERFAMILY SSF55594 1 87 1.57E-29 T 14-10-2018 IPR035895 HPr-like superfamily DB29_03593 faa94e6cdd63b70f798dce0f89edf974 87 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 39 54 - T 14-10-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site DB29_03593 faa94e6cdd63b70f798dce0f89edf974 87 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 82 3.4E-34 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like DB29_03593 faa94e6cdd63b70f798dce0f89edf974 87 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 14-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site DB29_02462 4b77b9f9558fb6f20b14820c52351667 204 SUPERFAMILY SSF53448 3 203 4.51E-24 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DB29_02462 4b77b9f9558fb6f20b14820c52351667 204 Pfam PF12804 MobA-like NTP transferase domain 5 170 3.2E-28 T 14-10-2018 IPR025877 MobA-like NTP transferase DB29_02462 4b77b9f9558fb6f20b14820c52351667 204 Gene3D G3DSA:3.90.550.10 1 202 8.1E-45 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DB29_02462 4b77b9f9558fb6f20b14820c52351667 204 TIGRFAM TIGR03202 pucB: xanthine dehydrogenase accessory protein pucB 3 193 5.4E-87 T 14-10-2018 IPR017615 Xanthine dehydrogenase, accessory protein PucB DB29_00244 d8546d464ef04271097b30a3d2b8c8a6 151 Gene3D G3DSA:3.30.530.20 5 142 6.8E-14 T 14-10-2018 IPR023393 START-like domain superfamily DB29_00244 d8546d464ef04271097b30a3d2b8c8a6 151 SUPERFAMILY SSF55961 4 136 6.42E-13 T 14-10-2018 DB29_00290 dd2862de98bd6dac16327e7b91547666 349 Gene3D G3DSA:3.20.20.30 1 346 1.3E-88 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 DB29_00290 dd2862de98bd6dac16327e7b91547666 349 SUPERFAMILY SSF51679 1 340 1.12E-80 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 DB29_00290 dd2862de98bd6dac16327e7b91547666 349 Pfam PF00296 Luciferase-like monooxygenase 1 301 5.4E-49 T 14-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 DB29_00290 dd2862de98bd6dac16327e7b91547666 349 TIGRFAM TIGR03858 LLM_2I7G: probable oxidoreductase, LLM family 2 339 2.6E-161 T 14-10-2018 IPR022290 Conserved hypothetical protein CHP03858, luciferase-like monooxygenase, putative DB29_01270 9e191c92a886634b5ae9df428ebd63d5 146 Pfam PF01047 MarR family 36 92 9.8E-18 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DB29_01270 9e191c92a886634b5ae9df428ebd63d5 146 SMART SM00347 28 128 2.9E-27 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DB29_01270 9e191c92a886634b5ae9df428ebd63d5 146 Gene3D G3DSA:1.10.10.10 2 139 1.1E-32 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_01270 9e191c92a886634b5ae9df428ebd63d5 146 PRINTS PR00598 Bacterial regulatory protein MarR family signature 88 104 7.8E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DB29_01270 9e191c92a886634b5ae9df428ebd63d5 146 PRINTS PR00598 Bacterial regulatory protein MarR family signature 118 138 7.8E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DB29_01270 9e191c92a886634b5ae9df428ebd63d5 146 PRINTS PR00598 Bacterial regulatory protein MarR family signature 69 84 7.8E-9 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DB29_01270 9e191c92a886634b5ae9df428ebd63d5 146 SUPERFAMILY SSF46785 10 138 2.57E-32 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_03499 76c358ccab5443c5ff67c9d341e6a9f2 379 SUPERFAMILY SSF53383 1 371 2.13E-95 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DB29_03499 76c358ccab5443c5ff67c9d341e6a9f2 379 Gene3D G3DSA:3.90.1150.10 2 369 9.6E-123 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DB29_03499 76c358ccab5443c5ff67c9d341e6a9f2 379 Pfam PF00266 Aminotransferase class-V 2 361 1.9E-70 T 14-10-2018 IPR000192 Aminotransferase class V domain DB29_03499 76c358ccab5443c5ff67c9d341e6a9f2 379 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 190 209 - T 14-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site DB29_03499 76c358ccab5443c5ff67c9d341e6a9f2 379 PIRSF PIRSF005572 1 377 8.2E-108 T 14-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 DB29_03499 76c358ccab5443c5ff67c9d341e6a9f2 379 Gene3D G3DSA:3.40.640.10 13 253 9.6E-123 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DB29_00923 44d2531f4bc06c0e178dedf07131bbd3 102 Pfam PF01371 Trp repressor protein 10 93 8.7E-34 T 14-10-2018 IPR000831 Trp repressor GO:0003700|GO:0005622|GO:0006355 DB29_00923 44d2531f4bc06c0e178dedf07131bbd3 102 Gene3D G3DSA:1.10.1270.10 2 102 5.2E-40 T 14-10-2018 IPR038116 TrpR-like superfamily DB29_00923 44d2531f4bc06c0e178dedf07131bbd3 102 TIGRFAM TIGR02531 yecD_yerC: TrpR homolog YerC/YecD 7 94 5.1E-48 T 14-10-2018 IPR013368 TrpR homologue YerC/YecD DB29_00923 44d2531f4bc06c0e178dedf07131bbd3 102 PIRSF PIRSF012508 1 100 1.0E-46 T 14-10-2018 IPR013368 TrpR homologue YerC/YecD DB29_00923 44d2531f4bc06c0e178dedf07131bbd3 102 SUPERFAMILY SSF48295 3 94 2.62E-32 T 14-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 DB29_00407 b6628d61aa02aa42488f85729025d798 298 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 107 289 1.0E-29 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DB29_00407 b6628d61aa02aa42488f85729025d798 298 SUPERFAMILY SSF161098 84 273 2.75E-29 T 14-10-2018 IPR035906 MetI-like superfamily DB29_00407 b6628d61aa02aa42488f85729025d798 298 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 14 60 1.9E-7 T 14-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain DB29_00407 b6628d61aa02aa42488f85729025d798 298 Gene3D G3DSA:1.10.3720.10 78 291 5.0E-23 T 14-10-2018 IPR035906 MetI-like superfamily DB29_01013 81e8810c5c80948d0767ded82331762a 402 PRINTS PR00359 B-class P450 signature 193 215 3.0E-58 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 DB29_01013 81e8810c5c80948d0767ded82331762a 402 PRINTS PR00359 B-class P450 signature 274 285 3.0E-58 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 DB29_01013 81e8810c5c80948d0767ded82331762a 402 PRINTS PR00359 B-class P450 signature 152 167 3.0E-58 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 DB29_01013 81e8810c5c80948d0767ded82331762a 402 PRINTS PR00359 B-class P450 signature 135 151 3.0E-58 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 DB29_01013 81e8810c5c80948d0767ded82331762a 402 PRINTS PR00359 B-class P450 signature 320 335 3.0E-58 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 DB29_01013 81e8810c5c80948d0767ded82331762a 402 PRINTS PR00359 B-class P450 signature 292 319 3.0E-58 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 DB29_01013 81e8810c5c80948d0767ded82331762a 402 PRINTS PR00359 B-class P450 signature 341 350 3.0E-58 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 DB29_01013 81e8810c5c80948d0767ded82331762a 402 PRINTS PR00359 B-class P450 signature 89 100 3.0E-58 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 DB29_01013 81e8810c5c80948d0767ded82331762a 402 PRINTS PR00359 B-class P450 signature 350 361 3.0E-58 T 14-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 DB29_01013 81e8810c5c80948d0767ded82331762a 402 SUPERFAMILY SSF48264 12 400 5.11E-96 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 DB29_01013 81e8810c5c80948d0767ded82331762a 402 Pfam PF00067 Cytochrome P450 198 370 2.6E-20 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 DB29_01013 81e8810c5c80948d0767ded82331762a 402 Gene3D G3DSA:1.10.630.10 2 402 6.5E-137 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 DB29_01013 81e8810c5c80948d0767ded82331762a 402 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 343 352 - T 14-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 DB29_01013 81e8810c5c80948d0767ded82331762a 402 PRINTS PR00385 P450 superfamily signature 239 256 2.8E-5 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 DB29_01013 81e8810c5c80948d0767ded82331762a 402 PRINTS PR00385 P450 superfamily signature 274 285 2.8E-5 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 DB29_01013 81e8810c5c80948d0767ded82331762a 402 PRINTS PR00385 P450 superfamily signature 341 350 2.8E-5 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 DB29_01013 81e8810c5c80948d0767ded82331762a 402 PRINTS PR00385 P450 superfamily signature 350 361 2.8E-5 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 DB29_03046 a7e2f68af53119714b15ffd2a826b967 312 Pfam PF04198 Putative sugar-binding domain 66 310 8.2E-69 T 14-10-2018 IPR007324 Sugar-binding domain, putative GO:0030246 DB29_03046 a7e2f68af53119714b15ffd2a826b967 312 SUPERFAMILY SSF100950 59 311 4.19E-71 T 14-10-2018 IPR037171 NagB/RpiA transferase-like DB29_03046 a7e2f68af53119714b15ffd2a826b967 312 Gene3D G3DSA:1.10.10.60 3 53 3.8E-21 T 14-10-2018 DB29_03046 a7e2f68af53119714b15ffd2a826b967 312 Gene3D G3DSA:3.40.50.1360 57 312 3.1E-81 T 14-10-2018 DB29_03046 a7e2f68af53119714b15ffd2a826b967 312 Pfam PF13412 Winged helix-turn-helix DNA-binding 20 52 6.9E-5 T 14-10-2018 DB29_03625 e2eb5c9f0182a0ba8c9985b60f795684 325 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 241 253 - T 14-10-2018 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 DB29_03625 e2eb5c9f0182a0ba8c9985b60f795684 325 Pfam PF00490 Delta-aminolevulinic acid dehydratase 6 321 1.3E-155 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 DB29_03625 e2eb5c9f0182a0ba8c9985b60f795684 325 PIRSF PIRSF001415 1 325 3.0E-161 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 DB29_03625 e2eb5c9f0182a0ba8c9985b60f795684 325 Gene3D G3DSA:3.20.20.70 1 323 3.6E-152 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DB29_03625 e2eb5c9f0182a0ba8c9985b60f795684 325 SMART SM01004 3 322 1.9E-248 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 DB29_03625 e2eb5c9f0182a0ba8c9985b60f795684 325 SUPERFAMILY SSF51569 3 324 7.47E-147 T 14-10-2018 DB29_03625 e2eb5c9f0182a0ba8c9985b60f795684 325 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 266 281 5.5E-60 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 DB29_03625 e2eb5c9f0182a0ba8c9985b60f795684 325 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 121 135 5.5E-60 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 DB29_03625 e2eb5c9f0182a0ba8c9985b60f795684 325 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 151 170 5.5E-60 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 DB29_03625 e2eb5c9f0182a0ba8c9985b60f795684 325 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 189 208 5.5E-60 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 DB29_03625 e2eb5c9f0182a0ba8c9985b60f795684 325 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 241 257 5.5E-60 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 DB29_03625 e2eb5c9f0182a0ba8c9985b60f795684 325 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 296 315 5.5E-60 T 14-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 DB29_00213 964778a735c9f87e0618695895120f4a 297 SUPERFAMILY SSF56349 107 295 2.85E-62 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 DB29_00213 964778a735c9f87e0618695895120f4a 297 Pfam PF00589 Phage integrase family 113 283 3.4E-56 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 DB29_00213 964778a735c9f87e0618695895120f4a 297 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 5 297 58.244 T 14-10-2018 IPR023009 Tyrosine recombinase XerC/XerD DB29_00213 964778a735c9f87e0618695895120f4a 297 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 3 297 60.543 T 14-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 DB29_00213 964778a735c9f87e0618695895120f4a 297 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 7 90 2.8E-20 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 DB29_00213 964778a735c9f87e0618695895120f4a 297 Gene3D G3DSA:1.10.150.130 3 98 1.6E-24 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal DB29_00213 964778a735c9f87e0618695895120f4a 297 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 8 297 1.2E-120 T 14-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 DB29_00213 964778a735c9f87e0618695895120f4a 297 Gene3D G3DSA:1.10.443.10 111 291 1.7E-69 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 DB29_00213 964778a735c9f87e0618695895120f4a 297 SUPERFAMILY SSF47823 6 100 8.44E-21 T 14-10-2018 DB29_03531 499c2b85b880ef5f2b41dd6817d5c7de 319 TIGRFAM TIGR02482 PFKA_ATP: 6-phosphofructokinase 3 299 1.2E-138 T 14-10-2018 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 DB29_03531 499c2b85b880ef5f2b41dd6817d5c7de 319 ProSitePatterns PS00433 Phosphofructokinase signature. 243 261 - T 14-10-2018 IPR015912 Phosphofructokinase, conserved site GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 DB29_03531 499c2b85b880ef5f2b41dd6817d5c7de 319 PIRSF PIRSF000532 1 319 1.1E-124 T 14-10-2018 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type GO:0005524|GO:0006002|GO:0006096|GO:0008443 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 DB29_03531 499c2b85b880ef5f2b41dd6817d5c7de 319 Pfam PF00365 Phosphofructokinase 3 275 1.2E-111 T 14-10-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 DB29_03531 499c2b85b880ef5f2b41dd6817d5c7de 319 Gene3D G3DSA:3.40.50.460 142 251 3.6E-119 T 14-10-2018 DB29_03531 499c2b85b880ef5f2b41dd6817d5c7de 319 Gene3D G3DSA:3.40.50.450 3 279 3.6E-119 T 14-10-2018 DB29_03531 499c2b85b880ef5f2b41dd6817d5c7de 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 212 224 2.9E-89 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 DB29_03531 499c2b85b880ef5f2b41dd6817d5c7de 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 6 25 2.9E-89 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 DB29_03531 499c2b85b880ef5f2b41dd6817d5c7de 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 93 109 2.9E-89 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 DB29_03531 499c2b85b880ef5f2b41dd6817d5c7de 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 239 261 2.9E-89 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 DB29_03531 499c2b85b880ef5f2b41dd6817d5c7de 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 176 193 2.9E-89 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 DB29_03531 499c2b85b880ef5f2b41dd6817d5c7de 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 120 137 2.9E-89 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 DB29_03531 499c2b85b880ef5f2b41dd6817d5c7de 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 31 44 2.9E-89 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 DB29_03531 499c2b85b880ef5f2b41dd6817d5c7de 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 138 156 2.9E-89 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 DB29_03531 499c2b85b880ef5f2b41dd6817d5c7de 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 158 174 2.9E-89 T 14-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 DB29_03531 499c2b85b880ef5f2b41dd6817d5c7de 319 SUPERFAMILY SSF53784 2 314 1.29E-119 T 14-10-2018 IPR035966 Phosphofructokinase superfamily GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 DB29_03531 499c2b85b880ef5f2b41dd6817d5c7de 319 Hamap MF_00339 ATP-dependent 6-phosphofructokinase [pfkA]. 1 318 48.967 T 14-10-2018 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 DB29_00488 ee652238ee34ef3e7bb31cbfc2a36250 408 PIRSF PIRSF037259 2 406 4.1E-133 T 14-10-2018 IPR010288 Bacterial ABC transporter EcsB GO:0016021 DB29_00488 ee652238ee34ef3e7bb31cbfc2a36250 408 Pfam PF05975 Bacterial ABC transporter protein EcsB 5 386 2.7E-111 T 14-10-2018 IPR010288 Bacterial ABC transporter EcsB GO:0016021 DB29_02004 7ccd3808cdbf438098f8778b1ec2994f 329 Pfam PF13177 DNA polymerase III, delta subunit 11 168 2.0E-57 T 14-10-2018 DB29_02004 7ccd3808cdbf438098f8778b1ec2994f 329 TIGRFAM TIGR00678 holB: DNA polymerase III, delta' subunit 17 198 1.7E-64 T 14-10-2018 IPR004622 DNA polymerase III, delta prime subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DB29_02004 7ccd3808cdbf438098f8778b1ec2994f 329 SUPERFAMILY SSF52540 11 197 1.3E-41 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_02004 7ccd3808cdbf438098f8778b1ec2994f 329 Pfam PF09115 DNA polymerase III, delta subunit, C terminal 244 327 1.9E-4 T 14-10-2018 IPR015199 DNA polymerase III, delta subunit, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DB29_02004 7ccd3808cdbf438098f8778b1ec2994f 329 Gene3D G3DSA:3.40.50.300 6 169 1.7E-50 T 14-10-2018 DB29_00648 a1d2abfd8e45e2528097a94f0da87471 385 PRINTS PR00412 Epoxide hydrolase signature 323 339 4.2E-19 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 DB29_00648 a1d2abfd8e45e2528097a94f0da87471 385 PRINTS PR00412 Epoxide hydrolase signature 354 376 4.2E-19 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 DB29_00648 a1d2abfd8e45e2528097a94f0da87471 385 PRINTS PR00412 Epoxide hydrolase signature 99 117 4.2E-19 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 DB29_00648 a1d2abfd8e45e2528097a94f0da87471 385 PRINTS PR00412 Epoxide hydrolase signature 188 201 4.2E-19 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 DB29_00648 a1d2abfd8e45e2528097a94f0da87471 385 PRINTS PR00412 Epoxide hydrolase signature 128 143 4.2E-19 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 DB29_00648 a1d2abfd8e45e2528097a94f0da87471 385 SUPERFAMILY SSF53474 2 379 7.36E-107 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DB29_00648 a1d2abfd8e45e2528097a94f0da87471 385 Pfam PF06441 Epoxide hydrolase N terminus 3 107 1.2E-33 T 14-10-2018 IPR010497 Epoxide hydrolase, N-terminal Reactome: R-HSA-211945 DB29_00648 a1d2abfd8e45e2528097a94f0da87471 385 Gene3D G3DSA:3.40.50.1820 4 384 8.4E-141 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DB29_00648 a1d2abfd8e45e2528097a94f0da87471 385 PIRSF PIRSF001112 1 383 2.3E-132 T 14-10-2018 IPR016292 Epoxide hydrolase GO:0033961 Reactome: R-HSA-211945 DB29_01560 a7f11dba7e4d987b0a29ad312e759187 462 Pfam PF00232 Glycosyl hydrolase family 1 6 462 3.8E-141 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DB29_01560 a7f11dba7e4d987b0a29ad312e759187 462 Gene3D G3DSA:3.20.20.80 5 461 9.4E-160 T 14-10-2018 DB29_01560 a7f11dba7e4d987b0a29ad312e759187 462 PRINTS PR00131 Glycosyl hydrolase family 1 signature 291 305 2.5E-16 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DB29_01560 a7f11dba7e4d987b0a29ad312e759187 462 PRINTS PR00131 Glycosyl hydrolase family 1 signature 407 424 2.5E-16 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DB29_01560 a7f11dba7e4d987b0a29ad312e759187 462 PRINTS PR00131 Glycosyl hydrolase family 1 signature 363 371 2.5E-16 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DB29_01560 a7f11dba7e4d987b0a29ad312e759187 462 PRINTS PR00131 Glycosyl hydrolase family 1 signature 386 397 2.5E-16 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DB29_01560 a7f11dba7e4d987b0a29ad312e759187 462 PRINTS PR00131 Glycosyl hydrolase family 1 signature 431 443 2.5E-16 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DB29_01560 a7f11dba7e4d987b0a29ad312e759187 462 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 363 371 - T 14-10-2018 IPR018120 Glycoside hydrolase family 1, active site DB29_01560 a7f11dba7e4d987b0a29ad312e759187 462 SUPERFAMILY SSF51445 4 456 1.67E-167 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily DB29_00689 6b3865e94984bd35f7372cf18d250aae 455 Pfam PF00571 CBS domain 291 340 1.3E-4 T 14-10-2018 IPR000644 CBS domain DB29_00689 6b3865e94984bd35f7372cf18d250aae 455 Pfam PF00571 CBS domain 220 273 2.1E-6 T 14-10-2018 IPR000644 CBS domain DB29_00689 6b3865e94984bd35f7372cf18d250aae 455 Pfam PF03471 Transporter associated domain 357 431 9.3E-18 T 14-10-2018 IPR005170 Transporter-associated domain DB29_00689 6b3865e94984bd35f7372cf18d250aae 455 SMART SM01091 356 433 2.7E-22 T 14-10-2018 IPR005170 Transporter-associated domain DB29_00689 6b3865e94984bd35f7372cf18d250aae 455 Pfam PF01595 Domain of unknown function DUF21 11 203 1.8E-45 T 14-10-2018 IPR002550 CNNM, transmembrane domain DB29_00689 6b3865e94984bd35f7372cf18d250aae 455 Gene3D G3DSA:3.30.465.10 350 431 1.6E-17 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 DB29_00689 6b3865e94984bd35f7372cf18d250aae 455 SUPERFAMILY SSF56176 354 436 9.82E-18 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 DB29_00689 6b3865e94984bd35f7372cf18d250aae 455 SUPERFAMILY SSF54631 206 343 5.81E-31 T 14-10-2018 DB29_00689 6b3865e94984bd35f7372cf18d250aae 455 Gene3D G3DSA:3.10.580.10 197 349 1.1E-49 T 14-10-2018 DB29_00689 6b3865e94984bd35f7372cf18d250aae 455 SMART SM00116 292 340 30.0 T 14-10-2018 IPR000644 CBS domain DB29_00689 6b3865e94984bd35f7372cf18d250aae 455 SMART SM00116 227 276 0.092 T 14-10-2018 IPR000644 CBS domain DB29_00266 718b9089be1f57bb68ac904aff19098d 263 SUPERFAMILY SSF110399 5 243 9.81E-81 T 14-10-2018 DB29_00266 718b9089be1f57bb68ac904aff19098d 263 Hamap MF_00443 Thiazole synthase [thiG]. 5 258 42.035 T 14-10-2018 IPR008867 Thiazole synthase GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 DB29_00266 718b9089be1f57bb68ac904aff19098d 263 Pfam PF05690 Thiazole biosynthesis protein ThiG 8 251 7.1E-109 T 14-10-2018 IPR033983 Thiazole synthase ThiG KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 DB29_00266 718b9089be1f57bb68ac904aff19098d 263 Gene3D G3DSA:3.20.20.70 3 262 9.2E-111 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DB29_02941 f2d1654698bcb0ea40ee2c22569e0d2d 486 Pfam PF00367 phosphotransferase system, EIIB 414 445 1.2E-11 T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 DB29_02941 f2d1654698bcb0ea40ee2c22569e0d2d 486 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 377 470 1.1E-17 T 14-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 DB29_02941 f2d1654698bcb0ea40ee2c22569e0d2d 486 Gene3D G3DSA:3.30.1360.60 406 485 3.4E-22 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 DB29_02941 f2d1654698bcb0ea40ee2c22569e0d2d 486 SUPERFAMILY SSF55604 410 483 1.31E-18 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 DB29_02941 f2d1654698bcb0ea40ee2c22569e0d2d 486 Pfam PF02378 Phosphotransferase system, EIIC 10 317 1.0E-70 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 DB29_02941 f2d1654698bcb0ea40ee2c22569e0d2d 486 TIGRFAM TIGR01998 PTS-II-BC-nag: PTS system, N-acetylglucosamine-specific IIBC component 1 481 1.2E-193 T 14-10-2018 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component GO:0008982|GO:0009401|GO:0015572|GO:0016021|GO:0019866 DB29_02941 f2d1654698bcb0ea40ee2c22569e0d2d 486 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 423 440 - T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 DB29_04148 0ee0f94c7e6ce4ed3f6f2632e9fab458 388 SUPERFAMILY SSF53474 71 342 8.88E-69 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DB29_04148 0ee0f94c7e6ce4ed3f6f2632e9fab458 388 Pfam PF07859 alpha/beta hydrolase fold 107 317 3.6E-65 T 14-10-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0016787 DB29_04148 0ee0f94c7e6ce4ed3f6f2632e9fab458 388 Gene3D G3DSA:3.40.50.1820 51 347 1.5E-80 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DB29_04148 0ee0f94c7e6ce4ed3f6f2632e9fab458 388 ProSitePatterns PS01174 Lipolytic enzymes "G-D-X-G" family, putative serine active site. 181 193 - T 14-10-2018 IPR033140 Lipase, GDXG, putative serine active site DB29_01274 a549d4dca5c8b926d026d6f52da43f91 377 Pfam PF07730 Histidine kinase 179 243 3.3E-18 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 DB29_01274 a549d4dca5c8b926d026d6f52da43f91 377 SUPERFAMILY SSF55874 258 368 6.17E-9 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB29_01274 a549d4dca5c8b926d026d6f52da43f91 377 Gene3D G3DSA:3.30.565.10 244 367 1.6E-26 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB29_02334 f074ab97f6d863ceea4a015e5dc3503b 149 Gene3D G3DSA:3.40.1400.10 1 147 1.4E-59 T 14-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 DB29_02334 f074ab97f6d863ceea4a015e5dc3503b 149 Pfam PF02502 Ribose/Galactose Isomerase 3 140 1.1E-56 T 14-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 DB29_02334 f074ab97f6d863ceea4a015e5dc3503b 149 SUPERFAMILY SSF89623 1 144 3.01E-59 T 14-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 DB29_02334 f074ab97f6d863ceea4a015e5dc3503b 149 PIRSF PIRSF005384 1 147 9.2E-59 T 14-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 DB29_02334 f074ab97f6d863ceea4a015e5dc3503b 149 TIGRFAM TIGR00689 rpiB_lacA_lacB: sugar-phosphate isomerase, RpiB/LacA/LacB family 3 146 4.3E-60 T 14-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 DB29_02334 f074ab97f6d863ceea4a015e5dc3503b 149 TIGRFAM TIGR01120 rpiB: ribose 5-phosphate isomerase B 2 142 2.5E-52 T 14-10-2018 IPR004785 Ribose 5-phosphate isomerase B GO:0004751|GO:0006098 DB29_00505 f9c6fdd390c648db318a41fb7e65fc12 283 Pfam PF08282 haloacid dehalogenase-like hydrolase 8 267 2.0E-42 T 14-10-2018 DB29_00505 f9c6fdd390c648db318a41fb7e65fc12 283 Gene3D G3DSA:3.40.50.1000 6 267 1.5E-55 T 14-10-2018 IPR023214 HAD superfamily DB29_00505 f9c6fdd390c648db318a41fb7e65fc12 283 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 7 243 8.8E-14 T 14-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 DB29_00505 f9c6fdd390c648db318a41fb7e65fc12 283 SUPERFAMILY SSF56784 3 275 2.4E-48 T 14-10-2018 IPR036412 HAD-like superfamily DB29_00505 f9c6fdd390c648db318a41fb7e65fc12 283 Gene3D G3DSA:3.30.1240.10 84 198 1.5E-55 T 14-10-2018 DB29_03318 49a68808585bd3fab943538c694c21a8 307 Pfam PF01497 Periplasmic binding protein 56 280 2.7E-38 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain DB29_03318 49a68808585bd3fab943538c694c21a8 307 Gene3D G3DSA:3.40.50.1980 173 303 9.6E-38 T 14-10-2018 DB29_03318 49a68808585bd3fab943538c694c21a8 307 Gene3D G3DSA:3.40.50.1980 40 172 4.1E-36 T 14-10-2018 DB29_03318 49a68808585bd3fab943538c694c21a8 307 SUPERFAMILY SSF53807 36 304 1.37E-62 T 14-10-2018 DB29_03921 a5a796cd261cf208f7bfd2f830bd6ed8 297 TIGRFAM TIGR02854 spore_II_GA: sigma-E processing peptidase SpoIIGA 1 292 3.2E-115 T 14-10-2018 IPR005081 Sigma-E processing peptidase SpoIIGA GO:0004190|GO:0006508|GO:0030436 DB29_03921 a5a796cd261cf208f7bfd2f830bd6ed8 297 PIRSF PIRSF018571 1 294 4.1E-89 T 14-10-2018 IPR005081 Sigma-E processing peptidase SpoIIGA GO:0004190|GO:0006508|GO:0030436 DB29_03921 a5a796cd261cf208f7bfd2f830bd6ed8 297 Pfam PF03419 Sporulation factor SpoIIGA 2 291 2.5E-84 T 14-10-2018 IPR005081 Sigma-E processing peptidase SpoIIGA GO:0004190|GO:0006508|GO:0030436 DB29_00607 e26ee38021216ac6a310c50785be4c56 237 Pfam PF08713 DNA alkylation repair enzyme 12 223 2.5E-62 T 14-10-2018 IPR014825 DNA alkylation repair enzyme DB29_00607 e26ee38021216ac6a310c50785be4c56 237 Gene3D G3DSA:1.25.10.90 3 231 2.1E-43 T 14-10-2018 DB29_00607 e26ee38021216ac6a310c50785be4c56 237 SUPERFAMILY SSF48371 13 225 7.77E-42 T 14-10-2018 IPR016024 Armadillo-type fold DB29_02593 ced7b2895b0edf48e4d01126f28b714b 289 SUPERFAMILY SSF81631 137 279 5.18E-54 T 14-10-2018 DB29_02593 ced7b2895b0edf48e4d01126f28b714b 289 PIRSF PIRSF000812 1 282 6.7E-110 T 14-10-2018 IPR007530 Aminoglycoside 6-adenylyltransferase DB29_02593 ced7b2895b0edf48e4d01126f28b714b 289 SUPERFAMILY SSF81301 1 134 1.47E-49 T 14-10-2018 DB29_02593 ced7b2895b0edf48e4d01126f28b714b 289 Gene3D G3DSA:1.20.120.330 149 287 1.3E-44 T 14-10-2018 DB29_02593 ced7b2895b0edf48e4d01126f28b714b 289 Gene3D G3DSA:3.30.460.10 9 148 3.2E-55 T 14-10-2018 DB29_02593 ced7b2895b0edf48e4d01126f28b714b 289 Pfam PF04439 Streptomycin adenylyltransferase 1 278 2.4E-124 T 14-10-2018 IPR007530 Aminoglycoside 6-adenylyltransferase DB29_01903 832631ea970aacb7e24c1fd3c2e0557b 102 Pfam PF00338 Ribosomal protein S10p/S20e 7 101 4.4E-37 T 14-10-2018 IPR027486 Ribosomal protein S10 domain DB29_01903 832631ea970aacb7e24c1fd3c2e0557b 102 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 14-10-2018 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB29_01903 832631ea970aacb7e24c1fd3c2e0557b 102 Gene3D G3DSA:3.30.70.600 1 102 7.1E-39 T 14-10-2018 IPR036838 Ribosomal protein S10 domain superfamily DB29_01903 832631ea970aacb7e24c1fd3c2e0557b 102 SMART SM01403 7 101 3.3E-61 T 14-10-2018 IPR027486 Ribosomal protein S10 domain DB29_01903 832631ea970aacb7e24c1fd3c2e0557b 102 SUPERFAMILY SSF54999 5 102 3.53E-39 T 14-10-2018 IPR036838 Ribosomal protein S10 domain superfamily DB29_01903 832631ea970aacb7e24c1fd3c2e0557b 102 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 3.4E-47 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB29_01903 832631ea970aacb7e24c1fd3c2e0557b 102 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 28.342 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB29_01903 832631ea970aacb7e24c1fd3c2e0557b 102 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 6.7E-20 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB29_01903 832631ea970aacb7e24c1fd3c2e0557b 102 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 6.7E-20 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB29_01903 832631ea970aacb7e24c1fd3c2e0557b 102 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 6.7E-20 T 14-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB29_03773 a93f466346d314956ce8b52c178d811d 491 Pfam PF02347 Glycine cleavage system P-protein 37 301 3.4E-13 T 14-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 DB29_03773 a93f466346d314956ce8b52c178d811d 491 SUPERFAMILY SSF53383 15 484 9.71E-117 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DB29_03773 a93f466346d314956ce8b52c178d811d 491 Gene3D G3DSA:3.90.1150.10 344 471 5.7E-50 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DB29_03773 a93f466346d314956ce8b52c178d811d 491 Gene3D G3DSA:3.40.640.10 87 343 1.9E-63 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DB29_03773 a93f466346d314956ce8b52c178d811d 491 Hamap MF_00713 Probable glycine dehydrogenase (decarboxylating) subunit 2 [gcvPB]. 8 486 59.852 T 14-10-2018 IPR023012 Probable glycine dehydrogenase (decarboxylating) subunit 2 GO:0004375|GO:0019464 KEGG: 00260+1.4.4.2 DB29_02144 363af62f74c3791bfcc7f1fbb9b296db 435 Pfam PF13183 4Fe-4S dicluster domain 14 80 4.7E-13 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DB29_02144 363af62f74c3791bfcc7f1fbb9b296db 435 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 16 27 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DB29_02144 363af62f74c3791bfcc7f1fbb9b296db 435 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 66 77 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DB29_02144 363af62f74c3791bfcc7f1fbb9b296db 435 PIRSF PIRSF000139 2 431 2.2E-121 T 14-10-2018 DB29_02144 363af62f74c3791bfcc7f1fbb9b296db 435 Gene3D G3DSA:1.10.1060.10 6 94 4.5E-9 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 DB29_02144 363af62f74c3791bfcc7f1fbb9b296db 435 SUPERFAMILY SSF46548 5 89 1.36E-17 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 DB29_02144 363af62f74c3791bfcc7f1fbb9b296db 435 Pfam PF02754 Cysteine-rich domain 317 401 1.4E-15 T 14-10-2018 IPR004017 Cysteine-rich domain DB29_02144 363af62f74c3791bfcc7f1fbb9b296db 435 Pfam PF02754 Cysteine-rich domain 188 270 2.7E-16 T 14-10-2018 IPR004017 Cysteine-rich domain DB29_01277 00f12151fbbd22c5e344ed0521e4b2f9 433 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 194 405 1.1E-65 T 14-10-2018 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 DB29_01277 00f12151fbbd22c5e344ed0521e4b2f9 433 PRINTS PR00732 Glycosyl hydrolase family 4 signature 110 130 1.5E-39 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 DB29_01277 00f12151fbbd22c5e344ed0521e4b2f9 433 PRINTS PR00732 Glycosyl hydrolase family 4 signature 3 18 1.5E-39 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 DB29_01277 00f12151fbbd22c5e344ed0521e4b2f9 433 PRINTS PR00732 Glycosyl hydrolase family 4 signature 190 202 1.5E-39 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 DB29_01277 00f12151fbbd22c5e344ed0521e4b2f9 433 PRINTS PR00732 Glycosyl hydrolase family 4 signature 164 175 1.5E-39 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 DB29_01277 00f12151fbbd22c5e344ed0521e4b2f9 433 PRINTS PR00732 Glycosyl hydrolase family 4 signature 72 88 1.5E-39 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 DB29_01277 00f12151fbbd22c5e344ed0521e4b2f9 433 PRINTS PR00732 Glycosyl hydrolase family 4 signature 94 107 1.5E-39 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 DB29_01277 00f12151fbbd22c5e344ed0521e4b2f9 433 PRINTS PR00732 Glycosyl hydrolase family 4 signature 139 156 1.5E-39 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 DB29_01277 00f12151fbbd22c5e344ed0521e4b2f9 433 Gene3D G3DSA:3.90.1820.20 1 429 1.1E-145 T 14-10-2018 DB29_01277 00f12151fbbd22c5e344ed0521e4b2f9 433 SUPERFAMILY SSF51735 2 167 2.56E-54 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_01277 00f12151fbbd22c5e344ed0521e4b2f9 433 Pfam PF02056 Family 4 glycosyl hydrolase 3 184 9.5E-69 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 DB29_01277 00f12151fbbd22c5e344ed0521e4b2f9 433 SUPERFAMILY SSF56327 168 432 5.4E-73 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 DB29_03977 5826725155db3429632b69cefc08f2a8 1061 Pfam PF06470 SMC proteins Flexible Hinge Domain 519 638 1.4E-28 T 14-10-2018 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 DB29_03977 5826725155db3429632b69cefc08f2a8 1061 SMART SM00968 519 638 4.3E-39 T 14-10-2018 IPR010935 SMCs flexible hinge GO:0005515|GO:0005524|GO:0005694|GO:0051276 DB29_03977 5826725155db3429632b69cefc08f2a8 1061 SUPERFAMILY SSF75553 483 686 4.05E-54 T 14-10-2018 IPR036277 SMCs flexible hinge superfamily GO:0005515|GO:0005524|GO:0005694|GO:0051276 DB29_03977 5826725155db3429632b69cefc08f2a8 1061 Gene3D G3DSA:3.30.70.1620 579 667 3.8E-64 T 14-10-2018 DB29_03977 5826725155db3429632b69cefc08f2a8 1061 Gene3D G3DSA:1.20.1060.20 495 679 3.8E-64 T 14-10-2018 DB29_03977 5826725155db3429632b69cefc08f2a8 1061 Gene3D G3DSA:3.40.50.300 1 236 9.5E-58 T 14-10-2018 DB29_03977 5826725155db3429632b69cefc08f2a8 1061 Hamap MF_01894 Chromosome partition protein Smc [smc]. 1 1061 20.663 T 14-10-2018 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 DB29_03977 5826725155db3429632b69cefc08f2a8 1061 TIGRFAM TIGR02168 SMC_prok_B: chromosome segregation protein SMC 2 1055 5.3E-265 T 14-10-2018 IPR011890 Structural maintenance of chromosomes protein, prokaryotic GO:0007062|GO:0030261 DB29_03977 5826725155db3429632b69cefc08f2a8 1061 SUPERFAMILY SSF52540 1 293 2.96E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_03977 5826725155db3429632b69cefc08f2a8 1061 PIRSF PIRSF005719 1 1057 6.9E-260 T 14-10-2018 IPR024704 Structural maintenance of chromosomes protein DB29_03977 5826725155db3429632b69cefc08f2a8 1061 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 517 8.6E-29 T 14-10-2018 IPR003395 RecF/RecN/SMC, N-terminal DB29_02342 5e4a26da96c1d4e2a0f420ae61bd9bc1 238 ProSitePatterns PS00449 ATP synthase a subunit signature. 168 177 - T 14-10-2018 IPR023011 ATP synthase, F0 complex, subunit A, active site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DB29_02342 5e4a26da96c1d4e2a0f420ae61bd9bc1 238 Hamap MF_01393 ATP synthase subunit a [atpB]. 7 238 12.648 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DB29_02342 5e4a26da96c1d4e2a0f420ae61bd9bc1 238 PRINTS PR00123 ATP synthase A subunit signature 218 233 2.7E-14 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DB29_02342 5e4a26da96c1d4e2a0f420ae61bd9bc1 238 PRINTS PR00123 ATP synthase A subunit signature 165 187 2.7E-14 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DB29_02342 5e4a26da96c1d4e2a0f420ae61bd9bc1 238 PRINTS PR00123 ATP synthase A subunit signature 79 95 2.7E-14 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DB29_02342 5e4a26da96c1d4e2a0f420ae61bd9bc1 238 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 17 234 7.8E-41 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DB29_02342 5e4a26da96c1d4e2a0f420ae61bd9bc1 238 SUPERFAMILY SSF81336 71 232 3.53E-35 T 14-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DB29_02342 5e4a26da96c1d4e2a0f420ae61bd9bc1 238 Pfam PF00119 ATP synthase A chain 21 232 9.1E-49 T 14-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DB29_02342 5e4a26da96c1d4e2a0f420ae61bd9bc1 238 Gene3D G3DSA:1.20.120.220 73 238 7.3E-35 T 14-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DB29_01926 f2f378dfb83e516bba4c6bfdfc32e49d 229 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 5 222 7.5E-73 T 14-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 DB29_01926 f2f378dfb83e516bba4c6bfdfc32e49d 229 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 2 222 41.763 T 14-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 DB29_01926 f2f378dfb83e516bba4c6bfdfc32e49d 229 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 4 223 1.8E-69 T 14-10-2018 IPR034683 Cytidylyltransferase IspD/TarI GO:0070567 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 DB29_01926 f2f378dfb83e516bba4c6bfdfc32e49d 229 SUPERFAMILY SSF53448 3 223 1.8E-58 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DB29_01926 f2f378dfb83e516bba4c6bfdfc32e49d 229 Gene3D G3DSA:3.90.550.10 1 228 1.3E-79 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DB29_01926 f2f378dfb83e516bba4c6bfdfc32e49d 229 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 100 107 - T 14-10-2018 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 DB29_03164 7d6301e63539fdba3a0b53af2a2c600c 280 Gene3D G3DSA:3.40.50.1010 11 169 2.9E-15 T 14-10-2018 DB29_03164 7d6301e63539fdba3a0b53af2a2c600c 280 Pfam PF01936 NYN domain 21 160 6.8E-23 T 14-10-2018 IPR021139 NYN domain, limkain-b1-type DB29_01250 4833c67e0b2bddf152444777cdfd087d 176 Gene3D G3DSA:1.10.340.30 2 176 1.3E-68 T 14-10-2018 DB29_01250 4833c67e0b2bddf152444777cdfd087d 176 SUPERFAMILY SSF48150 3 173 4.91E-66 T 14-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 DB29_01250 4833c67e0b2bddf152444777cdfd087d 176 Pfam PF03352 Methyladenine glycosylase 7 171 1.5E-62 T 14-10-2018 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 DB29_00322 812eab656e0d861e737e599f312dfbfa 256 Gene3D G3DSA:1.20.1440.120 88 228 1.8E-17 T 14-10-2018 DB29_00322 812eab656e0d861e737e599f312dfbfa 256 Hamap MF_00201 DNA repair protein RecO [recO]. 1 244 29.674 T 14-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 DB29_00322 812eab656e0d861e737e599f312dfbfa 256 TIGRFAM TIGR00613 reco: DNA repair protein RecO 4 244 2.0E-69 T 14-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 DB29_00322 812eab656e0d861e737e599f312dfbfa 256 Gene3D G3DSA:3.30.60.100 146 186 1.8E-17 T 14-10-2018 DB29_00322 812eab656e0d861e737e599f312dfbfa 256 Gene3D G3DSA:2.40.50.140 1 76 1.7E-15 T 14-10-2018 DB29_00322 812eab656e0d861e737e599f312dfbfa 256 SUPERFAMILY SSF50249 2 78 1.88E-19 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DB29_00322 812eab656e0d861e737e599f312dfbfa 256 Pfam PF11967 Recombination protein O N terminal 1 78 4.7E-27 T 14-10-2018 IPR022572 DNA replication/recombination mediator RecO, N-terminal DB29_00322 812eab656e0d861e737e599f312dfbfa 256 SUPERFAMILY SSF57863 81 233 1.88E-40 T 14-10-2018 IPR037278 ARFGAP/RecO-like zinc finger DB29_00322 812eab656e0d861e737e599f312dfbfa 256 Pfam PF02565 Recombination protein O C terminal 83 238 8.8E-38 T 14-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 DB29_04179 f74dde33e1d57c6ac32345a4ff7e5816 274 PRINTS PR00069 Aldo-keto reductase signature 156 185 2.3E-50 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DB29_04179 f74dde33e1d57c6ac32345a4ff7e5816 274 PRINTS PR00069 Aldo-keto reductase signature 34 58 2.3E-50 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DB29_04179 f74dde33e1d57c6ac32345a4ff7e5816 274 PRINTS PR00069 Aldo-keto reductase signature 122 139 2.3E-50 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DB29_04179 f74dde33e1d57c6ac32345a4ff7e5816 274 PRINTS PR00069 Aldo-keto reductase signature 194 218 2.3E-50 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DB29_04179 f74dde33e1d57c6ac32345a4ff7e5816 274 PRINTS PR00069 Aldo-keto reductase signature 90 108 2.3E-50 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DB29_04179 f74dde33e1d57c6ac32345a4ff7e5816 274 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 122 139 - T 14-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 DB29_04179 f74dde33e1d57c6ac32345a4ff7e5816 274 SUPERFAMILY SSF51430 3 264 1.3E-103 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily DB29_04179 f74dde33e1d57c6ac32345a4ff7e5816 274 PIRSF PIRSF000097 1 273 1.0E-96 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DB29_04179 f74dde33e1d57c6ac32345a4ff7e5816 274 Gene3D G3DSA:3.20.20.100 1 273 6.0E-123 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily DB29_04179 f74dde33e1d57c6ac32345a4ff7e5816 274 Pfam PF00248 Aldo/keto reductase family 15 259 2.5E-60 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain DB29_04179 f74dde33e1d57c6ac32345a4ff7e5816 274 ProSitePatterns PS00063 Aldo/keto reductase family putative active site signature. 227 242 - T 14-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 DB29_03659 af41b30d44ef28a0818364ccbdd5211b 238 Gene3D G3DSA:3.40.50.880 7 238 1.0E-68 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like DB29_03659 af41b30d44ef28a0818364ccbdd5211b 238 Pfam PF07722 Peptidase C26 26 218 7.3E-58 T 14-10-2018 IPR011697 Peptidase C26 GO:0016787 Reactome: R-HSA-6798695 DB29_03659 af41b30d44ef28a0818364ccbdd5211b 238 SUPERFAMILY SSF52317 32 237 1.33E-35 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like DB29_00141 47ce92628cc6b1a808f862dd00fa3177 359 PIRSF PIRSF021350 14 356 5.2E-80 T 14-10-2018 IPR008308 Uncharacterised conserved protein UCP021350 DB29_00141 47ce92628cc6b1a808f862dd00fa3177 359 Pfam PF14493 Helix-turn-helix domain 263 351 9.9E-20 T 14-10-2018 IPR029491 Helicase Helix-turn-helix domain Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 DB29_00217 636c31a3209b465245ec1935183f2200 179 SUPERFAMILY SSF55811 8 176 1.76E-49 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 DB29_00217 636c31a3209b465245ec1935183f2200 179 PRINTS PR00502 NUDIX hydrolase family signature 86 101 9.4E-6 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 DB29_00217 636c31a3209b465245ec1935183f2200 179 PRINTS PR00502 NUDIX hydrolase family signature 72 86 9.4E-6 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 DB29_00217 636c31a3209b465245ec1935183f2200 179 Gene3D G3DSA:3.90.79.10 1 178 1.5E-51 T 14-10-2018 DB29_00217 636c31a3209b465245ec1935183f2200 179 Pfam PF00293 NUDIX domain 43 150 2.6E-19 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 DB29_00217 636c31a3209b465245ec1935183f2200 179 ProSitePatterns PS00893 Nudix box signature. 77 98 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 DB29_03196 41e4a53f5ef6d2553c5d3bb519b31369 294 SUPERFAMILY SSF53448 5 274 8.14E-72 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DB29_03196 41e4a53f5ef6d2553c5d3bb519b31369 294 Pfam PF00483 Nucleotidyl transferase 6 256 6.7E-37 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 DB29_03196 41e4a53f5ef6d2553c5d3bb519b31369 294 Gene3D G3DSA:3.90.550.10 1 290 2.5E-96 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DB29_03196 41e4a53f5ef6d2553c5d3bb519b31369 294 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 4 261 1.5E-122 T 14-10-2018 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817 DB29_02097 5ef2e094f80dc0c733f954777b0bb711 329 Gene3D G3DSA:3.40.190.170 31 328 6.2E-102 T 14-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily DB29_02097 5ef2e094f80dc0c733f954777b0bb711 329 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 35 286 4.6E-72 T 14-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 DB29_02097 5ef2e094f80dc0c733f954777b0bb711 329 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 35 312 4.5E-82 T 14-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 DB29_02097 5ef2e094f80dc0c733f954777b0bb711 329 PIRSF PIRSF006470 4 329 9.2E-90 T 14-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 DB29_01909 9e645d83d3cad4f0b1b0319d66e8e9a1 1206 Gene3D G3DSA:1.10.40.90 363 405 7.6E-24 T 14-10-2018 DB29_01909 9e645d83d3cad4f0b1b0319d66e8e9a1 1206 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 10 1179 0.0 T 14-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DB29_01909 9e645d83d3cad4f0b1b0319d66e8e9a1 1206 Pfam PF05000 RNA polymerase Rpb1, domain 4 692 760 5.8E-14 T 14-10-2018 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DB29_01909 9e645d83d3cad4f0b1b0319d66e8e9a1 1206 Pfam PF00623 RNA polymerase Rpb1, domain 2 333 387 1.5E-9 T 14-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DB29_01909 9e645d83d3cad4f0b1b0319d66e8e9a1 1206 Pfam PF00623 RNA polymerase Rpb1, domain 2 379 474 3.0E-28 T 14-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DB29_01909 9e645d83d3cad4f0b1b0319d66e8e9a1 1206 Gene3D G3DSA:1.10.132.30 660 794 4.6E-60 T 14-10-2018 IPR038120 RNA polymerase Rpb1, funnel domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DB29_01909 9e645d83d3cad4f0b1b0319d66e8e9a1 1206 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 4 1189 18.689 T 14-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DB29_01909 9e645d83d3cad4f0b1b0319d66e8e9a1 1206 Pfam PF04998 RNA polymerase Rpb1, domain 5 993 1086 2.6E-15 T 14-10-2018 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DB29_01909 9e645d83d3cad4f0b1b0319d66e8e9a1 1206 Pfam PF04997 RNA polymerase Rpb1, domain 1 6 331 5.0E-88 T 14-10-2018 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DB29_01909 9e645d83d3cad4f0b1b0319d66e8e9a1 1206 Gene3D G3DSA:1.10.150.390 1128 1188 6.5E-28 T 14-10-2018 DB29_01909 9e645d83d3cad4f0b1b0319d66e8e9a1 1206 SUPERFAMILY SSF64484 5 1179 0.0 T 14-10-2018 DB29_01909 9e645d83d3cad4f0b1b0319d66e8e9a1 1206 Gene3D G3DSA:2.40.50.100 966 1027 1.9E-66 T 14-10-2018 DB29_01909 9e645d83d3cad4f0b1b0319d66e8e9a1 1206 Gene3D G3DSA:1.10.1790.20 950 1126 1.9E-66 T 14-10-2018 DB29_01909 9e645d83d3cad4f0b1b0319d66e8e9a1 1206 Pfam PF04998 RNA polymerase Rpb1, domain 5 770 971 5.4E-52 T 14-10-2018 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DB29_01909 9e645d83d3cad4f0b1b0319d66e8e9a1 1206 Gene3D G3DSA:1.10.274.100 479 659 2.6E-46 T 14-10-2018 DB29_01909 9e645d83d3cad4f0b1b0319d66e8e9a1 1206 SMART SM00663 224 503 1.0E-184 T 14-10-2018 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DB29_01909 9e645d83d3cad4f0b1b0319d66e8e9a1 1206 Pfam PF04983 RNA polymerase Rpb1, domain 3 478 663 2.2E-35 T 14-10-2018 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DB29_01611 d2cf36d676d68ff39cd750580e0b63c7 432 SUPERFAMILY SSF53850 20 431 3.61E-89 T 14-10-2018 DB29_01611 d2cf36d676d68ff39cd750580e0b63c7 432 Gene3D G3DSA:3.40.190.10 70 388 2.3E-110 T 14-10-2018 DB29_01611 d2cf36d676d68ff39cd750580e0b63c7 432 Gene3D G3DSA:3.40.190.10 154 418 2.3E-110 T 14-10-2018 DB29_01611 d2cf36d676d68ff39cd750580e0b63c7 432 Pfam PF01547 Bacterial extracellular solute-binding protein 54 348 3.8E-42 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein DB29_03637 490b988866d8615198caa57463ac92eb 191 Gene3D G3DSA:3.90.950.10 1 187 3.5E-65 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like DB29_03637 490b988866d8615198caa57463ac92eb 191 Hamap MF_00528 Septum formation protein Maf [maf]. 3 188 28.376 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 DB29_03637 490b988866d8615198caa57463ac92eb 191 SUPERFAMILY SSF52972 3 183 2.03E-57 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like DB29_03637 490b988866d8615198caa57463ac92eb 191 PIRSF PIRSF006305 1 190 4.3E-55 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 DB29_03637 490b988866d8615198caa57463ac92eb 191 TIGRFAM TIGR00172 maf: septum formation protein Maf 3 181 2.6E-53 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 DB29_03637 490b988866d8615198caa57463ac92eb 191 Pfam PF02545 Maf-like protein 4 183 1.9E-52 T 14-10-2018 IPR003697 Maf-like protein GO:0047429 DB29_00373 2d7006650a4de44c0f74d505f1ef704a 803 TIGRFAM TIGR00940 2a6301s01: monovalent cation:proton antiporter 4 803 0.0 T 14-10-2018 IPR005663 Monovalent cation proton antiporter subunit A GO:0015077|GO:0030004 DB29_00373 2d7006650a4de44c0f74d505f1ef704a 803 Pfam PF13244 Domain of unknown function (DUF4040) 637 700 4.1E-18 T 14-10-2018 IPR025383 Domain of unknown function DUF4040 DB29_00373 2d7006650a4de44c0f74d505f1ef704a 803 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 77 102 1.0E-45 T 14-10-2018 DB29_00373 2d7006650a4de44c0f74d505f1ef704a 803 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 309 321 1.0E-45 T 14-10-2018 DB29_00373 2d7006650a4de44c0f74d505f1ef704a 803 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 437 456 1.0E-45 T 14-10-2018 DB29_00373 2d7006650a4de44c0f74d505f1ef704a 803 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 106 126 1.0E-45 T 14-10-2018 DB29_00373 2d7006650a4de44c0f74d505f1ef704a 803 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 219 240 1.0E-45 T 14-10-2018 DB29_00373 2d7006650a4de44c0f74d505f1ef704a 803 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 153 174 1.0E-45 T 14-10-2018 DB29_00373 2d7006650a4de44c0f74d505f1ef704a 803 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 241 267 1.0E-45 T 14-10-2018 DB29_00373 2d7006650a4de44c0f74d505f1ef704a 803 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 63 116 9.0E-12 T 14-10-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DB29_00373 2d7006650a4de44c0f74d505f1ef704a 803 Pfam PF00361 Proton-conducting membrane transporter 129 420 2.2E-66 T 14-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DB29_01623 358b31f334d756f2c1e78ffc7165534d 637 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 8 196 2.2E-28 T 14-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 DB29_01623 358b31f334d756f2c1e78ffc7165534d 637 TIGRFAM TIGR04377 myo_inos_iolD: 3,5/4-trihydroxycyclohexa-1,2-dione hydrolase 6 635 7.4E-269 T 14-10-2018 IPR030817 3,5/4-Trihydroxycyclohexa-1,2-dione hydrolase GO:0016823|GO:0019310|GO:0030976 KEGG: 00562+3.7.1.22 DB29_01623 358b31f334d756f2c1e78ffc7165534d 637 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 220 353 6.4E-32 T 14-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 DB29_01623 358b31f334d756f2c1e78ffc7165534d 637 SUPERFAMILY SSF52467 212 378 9.41E-38 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily DB29_01623 358b31f334d756f2c1e78ffc7165534d 637 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 476 495 - T 14-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 DB29_01623 358b31f334d756f2c1e78ffc7165534d 637 Hamap MF_01669 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase [iolD]. 2 637 57.906 T 14-10-2018 IPR023757 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase, Firmicutes GO:0000287|GO:0016787|GO:0019310|GO:0030976 KEGG: 00562+3.7.1.22 DB29_01623 358b31f334d756f2c1e78ffc7165534d 637 Gene3D G3DSA:3.40.50.970 2 212 3.2E-29 T 14-10-2018 DB29_01623 358b31f334d756f2c1e78ffc7165534d 637 SUPERFAMILY SSF52518 417 626 3.75E-56 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold DB29_01623 358b31f334d756f2c1e78ffc7165534d 637 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 440 592 8.9E-44 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 DB29_01623 358b31f334d756f2c1e78ffc7165534d 637 Gene3D G3DSA:3.40.50.1220 213 401 6.2E-34 T 14-10-2018 DB29_01623 358b31f334d756f2c1e78ffc7165534d 637 Gene3D G3DSA:3.40.50.970 415 604 1.2E-48 T 14-10-2018 DB29_01623 358b31f334d756f2c1e78ffc7165534d 637 SUPERFAMILY SSF52518 6 210 2.3E-28 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold DB29_02701 364a40b5933e4d4cbc2159e8c84ca07a 474 SMART SM00388 248 311 6.4E-12 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DB29_02701 364a40b5933e4d4cbc2159e8c84ca07a 474 SMART SM00387 362 470 2.6E-25 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DB29_02701 364a40b5933e4d4cbc2159e8c84ca07a 474 Gene3D G3DSA:3.30.565.10 316 471 7.1E-30 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB29_02701 364a40b5933e4d4cbc2159e8c84ca07a 474 SUPERFAMILY SSF55874 332 467 1.57E-27 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB29_02701 364a40b5933e4d4cbc2159e8c84ca07a 474 Pfam PF00512 His Kinase A (phospho-acceptor) domain 249 304 1.7E-13 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DB29_02701 364a40b5933e4d4cbc2159e8c84ca07a 474 SMART SM00304 188 240 1.3E-5 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DB29_02701 364a40b5933e4d4cbc2159e8c84ca07a 474 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 363 467 2.3E-19 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DB29_02701 364a40b5933e4d4cbc2159e8c84ca07a 474 SUPERFAMILY SSF47384 231 304 2.16E-14 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DB29_02701 364a40b5933e4d4cbc2159e8c84ca07a 474 PRINTS PR00344 Bacterial sensor protein C-terminal signature 432 450 7.2E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB29_02701 364a40b5933e4d4cbc2159e8c84ca07a 474 PRINTS PR00344 Bacterial sensor protein C-terminal signature 418 428 7.2E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB29_02701 364a40b5933e4d4cbc2159e8c84ca07a 474 PRINTS PR00344 Bacterial sensor protein C-terminal signature 400 414 7.2E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB29_02701 364a40b5933e4d4cbc2159e8c84ca07a 474 SUPERFAMILY SSF158472 193 237 3.92E-6 T 14-10-2018 DB29_02701 364a40b5933e4d4cbc2159e8c84ca07a 474 Gene3D G3DSA:1.10.287.130 188 305 1.7E-20 T 14-10-2018 DB29_01015 6af0fec9df95fc17b73b4dcb9e0ca6a7 625 SUPERFAMILY SSF54211 236 488 1.14E-81 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DB29_01015 6af0fec9df95fc17b73b4dcb9e0ca6a7 625 Gene3D G3DSA:3.30.230.80 235 402 2.5E-56 T 14-10-2018 DB29_01015 6af0fec9df95fc17b73b4dcb9e0ca6a7 625 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 24 155 1.1E-13 T 14-10-2018 DB29_01015 6af0fec9df95fc17b73b4dcb9e0ca6a7 625 Gene3D G3DSA:3.40.50.11260 403 488 2.7E-27 T 14-10-2018 DB29_01015 6af0fec9df95fc17b73b4dcb9e0ca6a7 625 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 22 31 - T 14-10-2018 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0051082 DB29_01015 6af0fec9df95fc17b73b4dcb9e0ca6a7 625 Gene3D G3DSA:1.20.120.790 491 625 5.4E-35 T 14-10-2018 IPR037196 HSP90, C-terminal domain DB29_01015 6af0fec9df95fc17b73b4dcb9e0ca6a7 625 Pfam PF00183 Hsp90 protein 226 624 8.6E-111 T 14-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 DB29_01015 6af0fec9df95fc17b73b4dcb9e0ca6a7 625 Pfam PF00183 Hsp90 protein 184 229 2.1E-7 T 14-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 DB29_01015 6af0fec9df95fc17b73b4dcb9e0ca6a7 625 Hamap MF_00505 Chaperone protein HtpG [htpG]. 1 625 27.128 T 14-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 DB29_01015 6af0fec9df95fc17b73b4dcb9e0ca6a7 625 SUPERFAMILY SSF110942 511 624 2.62E-30 T 14-10-2018 IPR037196 HSP90, C-terminal domain DB29_01015 6af0fec9df95fc17b73b4dcb9e0ca6a7 625 PRINTS PR00775 90kDa heat shock protein signature 72 89 9.5E-56 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal DB29_01015 6af0fec9df95fc17b73b4dcb9e0ca6a7 625 PRINTS PR00775 90kDa heat shock protein signature 2 22 9.5E-56 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal DB29_01015 6af0fec9df95fc17b73b4dcb9e0ca6a7 625 PRINTS PR00775 90kDa heat shock protein signature 115 137 9.5E-56 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal DB29_01015 6af0fec9df95fc17b73b4dcb9e0ca6a7 625 PRINTS PR00775 90kDa heat shock protein signature 23 45 9.5E-56 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal DB29_01015 6af0fec9df95fc17b73b4dcb9e0ca6a7 625 PRINTS PR00775 90kDa heat shock protein signature 165 182 9.5E-56 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal DB29_01015 6af0fec9df95fc17b73b4dcb9e0ca6a7 625 PRINTS PR00775 90kDa heat shock protein signature 90 107 9.5E-56 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal DB29_01015 6af0fec9df95fc17b73b4dcb9e0ca6a7 625 PRINTS PR00775 90kDa heat shock protein signature 188 206 9.5E-56 T 14-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal DB29_01015 6af0fec9df95fc17b73b4dcb9e0ca6a7 625 Gene3D G3DSA:3.30.565.10 1 228 1.7E-75 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB29_01015 6af0fec9df95fc17b73b4dcb9e0ca6a7 625 PIRSF PIRSF002583 1 625 3.2E-206 T 14-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 DB29_01015 6af0fec9df95fc17b73b4dcb9e0ca6a7 625 SUPERFAMILY SSF55874 1 211 4.16E-63 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB29_03063 b52d492ef2d0e8488b9150a48a2bedef 328 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 7 312 3.7E-67 T 14-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 DB29_03063 b52d492ef2d0e8488b9150a48a2bedef 328 PIRSF PIRSF036500 1 327 4.6E-196 T 14-10-2018 IPR005994 Guanosine monophosphate reductase, type2 GO:0003920|GO:0006163|GO:1902560 KEGG: 00230+1.7.1.7 DB29_03063 b52d492ef2d0e8488b9150a48a2bedef 328 Gene3D G3DSA:3.20.20.70 1 328 2.2E-107 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DB29_03063 b52d492ef2d0e8488b9150a48a2bedef 328 SMART SM01240 4 328 3.1E-114 T 14-10-2018 DB29_03063 b52d492ef2d0e8488b9150a48a2bedef 328 TIGRFAM TIGR01306 GMP_reduct_2: guanosine monophosphate reductase 5 325 1.5E-200 T 14-10-2018 IPR005994 Guanosine monophosphate reductase, type2 GO:0003920|GO:0006163|GO:1902560 KEGG: 00230+1.7.1.7 DB29_03063 b52d492ef2d0e8488b9150a48a2bedef 328 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 166 178 - T 14-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 DB29_03063 b52d492ef2d0e8488b9150a48a2bedef 328 SUPERFAMILY SSF51412 4 315 2.75E-91 T 14-10-2018 DB29_03063 b52d492ef2d0e8488b9150a48a2bedef 328 Hamap MF_01511 GMP reductase [guaC]. 3 326 64.095 T 14-10-2018 IPR005994 Guanosine monophosphate reductase, type2 GO:0003920|GO:0006163|GO:1902560 KEGG: 00230+1.7.1.7 DB29_00819 5fd90bfbf1dd03439d61493765692d55 228 Pfam PF12840 Helix-turn-helix domain 10 68 7.8E-10 T 14-10-2018 DB29_00819 5fd90bfbf1dd03439d61493765692d55 228 SMART SM00418 9 88 5.9E-15 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DB29_00819 5fd90bfbf1dd03439d61493765692d55 228 SUPERFAMILY SSF46785 7 88 4.14E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_00819 5fd90bfbf1dd03439d61493765692d55 228 Gene3D G3DSA:1.10.10.10 4 95 5.9E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_01820 7a830ac318de42ca4b26c1aecf2e0644 274 SUPERFAMILY SSF46689 220 269 8.96E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DB29_01820 7a830ac318de42ca4b26c1aecf2e0644 274 SUPERFAMILY SSF46689 169 218 1.43E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DB29_01820 7a830ac318de42ca4b26c1aecf2e0644 274 SMART SM00342 184 266 9.8E-22 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DB29_01820 7a830ac318de42ca4b26c1aecf2e0644 274 Gene3D G3DSA:1.10.10.60 162 271 2.7E-25 T 14-10-2018 DB29_01820 7a830ac318de42ca4b26c1aecf2e0644 274 Pfam PF12833 Helix-turn-helix domain 190 266 8.3E-20 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DB29_01820 7a830ac318de42ca4b26c1aecf2e0644 274 SUPERFAMILY SSF51215 11 153 5.1E-23 T 14-10-2018 IPR037923 Transcription regulator HTH-like DB29_01820 7a830ac318de42ca4b26c1aecf2e0644 274 Pfam PF02311 AraC-like ligand binding domain 16 129 2.4E-21 T 14-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 DB29_01820 7a830ac318de42ca4b26c1aecf2e0644 274 Gene3D G3DSA:2.60.120.10 2 88 6.3E-6 T 14-10-2018 IPR014710 RmlC-like jelly roll fold DB29_01702 e9e27bda3ed8b80b1354d19044d91ad0 370 Pfam PF08402 TOBE domain 279 348 2.6E-4 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 DB29_01702 e9e27bda3ed8b80b1354d19044d91ad0 370 SUPERFAMILY SSF50331 237 356 4.37E-21 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal DB29_01702 e9e27bda3ed8b80b1354d19044d91ad0 370 SUPERFAMILY SSF52540 4 243 1.9E-83 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_01702 e9e27bda3ed8b80b1354d19044d91ad0 370 SMART SM00382 29 212 8.6E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_01702 e9e27bda3ed8b80b1354d19044d91ad0 370 Gene3D G3DSA:2.40.50.140 286 340 3.2E-25 T 14-10-2018 DB29_01702 e9e27bda3ed8b80b1354d19044d91ad0 370 Pfam PF00005 ABC transporter 20 162 1.8E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB29_01702 e9e27bda3ed8b80b1354d19044d91ad0 370 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB29_01702 e9e27bda3ed8b80b1354d19044d91ad0 370 Gene3D G3DSA:2.40.50.940 223 349 3.2E-25 T 14-10-2018 DB29_01702 e9e27bda3ed8b80b1354d19044d91ad0 370 Gene3D G3DSA:3.40.50.300 4 222 2.3E-65 T 14-10-2018 DB29_03589 4dde3f3d127bf9b0bd443fd8fff5c55f 589 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 396 411 4.9E-7 T 14-10-2018 DB29_03589 4dde3f3d127bf9b0bd443fd8fff5c55f 589 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 4.9E-7 T 14-10-2018 DB29_03589 4dde3f3d127bf9b0bd443fd8fff5c55f 589 SUPERFAMILY SSF46977 443 581 5.1E-44 T 14-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 DB29_03589 4dde3f3d127bf9b0bd443fd8fff5c55f 589 Gene3D G3DSA:3.90.700.10 258 367 8.9E-123 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 DB29_03589 4dde3f3d127bf9b0bd443fd8fff5c55f 589 Gene3D G3DSA:1.20.58.100 423 539 1.3E-32 T 14-10-2018 DB29_03589 4dde3f3d127bf9b0bd443fd8fff5c55f 589 Pfam PF02910 Fumarate reductase flavoprotein C-term 452 579 8.9E-41 T 14-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 DB29_03589 4dde3f3d127bf9b0bd443fd8fff5c55f 589 TIGRFAM TIGR01811 sdhA_Bsu: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 6 579 2.9E-284 T 14-10-2018 IPR011280 Succinate dehydrogenase/fumarate reductase flavoprotein subunit, low-GC Gram-positive bacteria KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 DB29_03589 4dde3f3d127bf9b0bd443fd8fff5c55f 589 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 39 48 - T 14-10-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 DB29_03589 4dde3f3d127bf9b0bd443fd8fff5c55f 589 Gene3D G3DSA:3.50.50.60 6 403 8.9E-123 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB29_03589 4dde3f3d127bf9b0bd443fd8fff5c55f 589 Pfam PF00890 FAD binding domain 6 392 1.3E-84 T 14-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 DB29_03589 4dde3f3d127bf9b0bd443fd8fff5c55f 589 PIRSF PIRSF000171 2 239 2.2E-18 T 14-10-2018 DB29_03589 4dde3f3d127bf9b0bd443fd8fff5c55f 589 PIRSF PIRSF000171 341 576 4.3E-15 T 14-10-2018 DB29_03589 4dde3f3d127bf9b0bd443fd8fff5c55f 589 SUPERFAMILY SSF51905 6 426 4.72E-62 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB29_03589 4dde3f3d127bf9b0bd443fd8fff5c55f 589 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 356 378 4.0E-9 T 14-10-2018 DB29_03589 4dde3f3d127bf9b0bd443fd8fff5c55f 589 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 4.0E-9 T 14-10-2018 DB29_03589 4dde3f3d127bf9b0bd443fd8fff5c55f 589 SUPERFAMILY SSF56425 231 353 3.44E-31 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 DB29_01216 a9c294feba5bd32b48deed87fe8cda1d 140 Pfam PF04039 Domain related to MnhB subunit of Na+/H+ antiporter 7 131 5.8E-31 T 14-10-2018 IPR007182 Na+/H+ antiporter MnhB subunit-related protein DB29_00664 68ce121bfc63b71f14e66693fc13add6 434 Gene3D G3DSA:3.90.1150.10 9 420 3.1E-167 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DB29_00664 68ce121bfc63b71f14e66693fc13add6 434 Gene3D G3DSA:3.40.640.10 72 320 3.1E-167 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DB29_00664 68ce121bfc63b71f14e66693fc13add6 434 SUPERFAMILY SSF53383 2 426 5.1E-123 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DB29_00664 68ce121bfc63b71f14e66693fc13add6 434 Pfam PF00202 Aminotransferase class-III 35 399 1.5E-72 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DB29_00664 68ce121bfc63b71f14e66693fc13add6 434 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 237 273 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DB29_00664 68ce121bfc63b71f14e66693fc13add6 434 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 5 428 95.002 T 14-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 DB29_00664 68ce121bfc63b71f14e66693fc13add6 434 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 6 427 6.3E-170 T 14-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 DB29_03480 4aa7470a89cf07c3ebf9c9ce67af7d88 201 Pfam PF01588 Putative tRNA binding domain 96 197 4.7E-25 T 14-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 DB29_03480 4aa7470a89cf07c3ebf9c9ce67af7d88 201 Pfam PF14794 Domain of unknown function (DUF4479) 23 90 3.5E-17 T 14-10-2018 IPR027855 Domain of unknown function DUF4479 DB29_03480 4aa7470a89cf07c3ebf9c9ce67af7d88 201 Gene3D G3DSA:2.40.50.140 5 199 1.1E-70 T 14-10-2018 DB29_03480 4aa7470a89cf07c3ebf9c9ce67af7d88 201 Gene3D G3DSA:3.30.1940.10 18 92 1.1E-70 T 14-10-2018 IPR037154 YtpR-like superfamily DB29_03480 4aa7470a89cf07c3ebf9c9ce67af7d88 201 SUPERFAMILY SSF50249 93 199 1.69E-32 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DB29_03541 ba9aba89b474dc6d67b2a3ad4206a9f0 877 Gene3D G3DSA:3.40.50.1010 4 277 1.2E-101 T 14-10-2018 DB29_03541 ba9aba89b474dc6d67b2a3ad4206a9f0 877 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 3 169 2.0E-56 T 14-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 DB29_03541 ba9aba89b474dc6d67b2a3ad4206a9f0 877 PRINTS PR00868 DNA-polymerase family A (pol I) signature 794 810 4.0E-81 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DB29_03541 ba9aba89b474dc6d67b2a3ad4206a9f0 877 PRINTS PR00868 DNA-polymerase family A (pol I) signature 603 625 4.0E-81 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DB29_03541 ba9aba89b474dc6d67b2a3ad4206a9f0 877 PRINTS PR00868 DNA-polymerase family A (pol I) signature 762 773 4.0E-81 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DB29_03541 ba9aba89b474dc6d67b2a3ad4206a9f0 877 PRINTS PR00868 DNA-polymerase family A (pol I) signature 679 692 4.0E-81 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DB29_03541 ba9aba89b474dc6d67b2a3ad4206a9f0 877 PRINTS PR00868 DNA-polymerase family A (pol I) signature 740 751 4.0E-81 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DB29_03541 ba9aba89b474dc6d67b2a3ad4206a9f0 877 PRINTS PR00868 DNA-polymerase family A (pol I) signature 626 641 4.0E-81 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DB29_03541 ba9aba89b474dc6d67b2a3ad4206a9f0 877 PRINTS PR00868 DNA-polymerase family A (pol I) signature 649 672 4.0E-81 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DB29_03541 ba9aba89b474dc6d67b2a3ad4206a9f0 877 PRINTS PR00868 DNA-polymerase family A (pol I) signature 824 837 4.0E-81 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DB29_03541 ba9aba89b474dc6d67b2a3ad4206a9f0 877 PRINTS PR00868 DNA-polymerase family A (pol I) signature 703 728 4.0E-81 T 14-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DB29_03541 ba9aba89b474dc6d67b2a3ad4206a9f0 877 SMART SM00474 298 467 7.9E-13 T 14-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 DB29_03541 ba9aba89b474dc6d67b2a3ad4206a9f0 877 SMART SM00482 634 841 1.7E-120 T 14-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DB29_03541 ba9aba89b474dc6d67b2a3ad4206a9f0 877 ProSitePatterns PS00447 DNA polymerase family A signature. 703 722 - T 14-10-2018 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DB29_03541 ba9aba89b474dc6d67b2a3ad4206a9f0 877 Gene3D G3DSA:1.10.150.20 173 246 1.2E-101 T 14-10-2018 DB29_03541 ba9aba89b474dc6d67b2a3ad4206a9f0 877 SUPERFAMILY SSF56672 471 877 5.56E-161 T 14-10-2018 DB29_03541 ba9aba89b474dc6d67b2a3ad4206a9f0 877 Gene3D G3DSA:1.10.150.20 658 801 1.1E-111 T 14-10-2018 DB29_03541 ba9aba89b474dc6d67b2a3ad4206a9f0 877 SUPERFAMILY SSF53098 301 468 1.5E-43 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily DB29_03541 ba9aba89b474dc6d67b2a3ad4206a9f0 877 Gene3D G3DSA:1.20.1060.10 492 606 1.7E-45 T 14-10-2018 DB29_03541 ba9aba89b474dc6d67b2a3ad4206a9f0 877 SMART SM00279 172 207 2.8E-18 T 14-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 DB29_03541 ba9aba89b474dc6d67b2a3ad4206a9f0 877 Pfam PF00476 DNA polymerase family A 499 874 2.4E-163 T 14-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DB29_03541 ba9aba89b474dc6d67b2a3ad4206a9f0 877 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 171 262 2.7E-33 T 14-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 DB29_03541 ba9aba89b474dc6d67b2a3ad4206a9f0 877 SMART SM00475 2 261 3.1E-143 T 14-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 DB29_03541 ba9aba89b474dc6d67b2a3ad4206a9f0 877 SUPERFAMILY SSF88723 2 169 1.28E-54 T 14-10-2018 IPR029060 PIN-like domain superfamily DB29_03541 ba9aba89b474dc6d67b2a3ad4206a9f0 877 Gene3D G3DSA:3.30.420.10 298 490 5.9E-60 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 DB29_03541 ba9aba89b474dc6d67b2a3ad4206a9f0 877 SUPERFAMILY SSF47807 170 285 2.84E-32 T 14-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily DB29_03541 ba9aba89b474dc6d67b2a3ad4206a9f0 877 TIGRFAM TIGR00593 pola: DNA polymerase I 4 877 0.0 T 14-10-2018 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 DB29_03541 ba9aba89b474dc6d67b2a3ad4206a9f0 877 Gene3D G3DSA:3.30.70.370 612 873 1.1E-111 T 14-10-2018 DB29_00142 fc6730abc23abfab525f8b6090b6dae3 83 Pfam PF13370 4Fe-4S single cluster domain of Ferredoxin I 8 69 4.5E-19 T 14-10-2018 DB29_00142 fc6730abc23abfab525f8b6090b6dae3 83 SUPERFAMILY SSF54862 5 73 8.38E-10 T 14-10-2018 DB29_00142 fc6730abc23abfab525f8b6090b6dae3 83 PRINTS PR00352 3Fe-4S ferredoxin signature 8 19 1.4E-6 T 14-10-2018 IPR001080 3Fe-4S ferredoxin GO:0005506|GO:0009055 DB29_00142 fc6730abc23abfab525f8b6090b6dae3 83 PRINTS PR00352 3Fe-4S ferredoxin signature 19 29 1.4E-6 T 14-10-2018 IPR001080 3Fe-4S ferredoxin GO:0005506|GO:0009055 DB29_00142 fc6730abc23abfab525f8b6090b6dae3 83 PRINTS PR00352 3Fe-4S ferredoxin signature 56 68 1.4E-6 T 14-10-2018 IPR001080 3Fe-4S ferredoxin GO:0005506|GO:0009055 DB29_00142 fc6730abc23abfab525f8b6090b6dae3 83 Gene3D G3DSA:3.30.70.20 3 83 2.2E-30 T 14-10-2018 DB29_01467 4e0a4356e2f5701ee83831e3b8bbcffa 385 Gene3D G3DSA:2.30.40.10 7 376 5.3E-105 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DB29_01467 4e0a4356e2f5701ee83831e3b8bbcffa 385 SUPERFAMILY SSF51338 2 381 1.79E-22 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DB29_01467 4e0a4356e2f5701ee83831e3b8bbcffa 385 Gene3D G3DSA:3.20.20.140 58 342 5.3E-105 T 14-10-2018 DB29_01467 4e0a4356e2f5701ee83831e3b8bbcffa 385 SUPERFAMILY SSF51556 57 346 6.81E-41 T 14-10-2018 IPR032466 Metal-dependent hydrolase DB29_01467 4e0a4356e2f5701ee83831e3b8bbcffa 385 Pfam PF01979 Amidohydrolase family 223 362 2.8E-13 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 DB29_02561 20985b2e4f107241948b9974a6d2673b 403 SUPERFAMILY SSF55031 190 292 5.58E-15 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain DB29_02561 20985b2e4f107241948b9974a6d2673b 403 Gene3D G3DSA:3.30.70.360 189 308 3.1E-60 T 14-10-2018 DB29_02561 20985b2e4f107241948b9974a6d2673b 403 SUPERFAMILY SSF53187 24 395 6.56E-46 T 14-10-2018 DB29_02561 20985b2e4f107241948b9974a6d2673b 403 Gene3D G3DSA:3.40.630.10 35 372 3.1E-60 T 14-10-2018 DB29_02561 20985b2e4f107241948b9974a6d2673b 403 Pfam PF01546 Peptidase family M20/M25/M40 87 375 4.8E-20 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 DB29_02561 20985b2e4f107241948b9974a6d2673b 403 Pfam PF07687 Peptidase dimerisation domain 190 287 7.7E-14 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain DB29_00529 7377edf6794feeccbb0c948fae4b689b 512 SUPERFAMILY SSF56317 227 495 2.22E-55 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily DB29_00529 7377edf6794feeccbb0c948fae4b689b 512 Gene3D G3DSA:3.40.630.30 7 225 2.3E-58 T 14-10-2018 DB29_00529 7377edf6794feeccbb0c948fae4b689b 512 Pfam PF00583 Acetyltransferase (GNAT) family 25 143 4.4E-12 T 14-10-2018 IPR000182 GNAT domain DB29_00529 7377edf6794feeccbb0c948fae4b689b 512 SUPERFAMILY SSF55729 12 144 1.8E-17 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase DB29_00529 7377edf6794feeccbb0c948fae4b689b 512 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 374 394 - T 14-10-2018 IPR001110 Uncharacterised protein family UPF0012, conserved site DB29_00529 7377edf6794feeccbb0c948fae4b689b 512 Gene3D G3DSA:3.60.110.10 227 512 1.3E-54 T 14-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily DB29_00529 7377edf6794feeccbb0c948fae4b689b 512 Pfam PF00795 Carbon-nitrogen hydrolase 230 488 3.0E-29 T 14-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 DB29_02694 8be27a15a04f8e6a0bf64f5e04a84104 1049 TIGRFAM TIGR03891 thiopep_ocin: thiopeptide-type bacteriocin biosynthesis domain 775 1033 4.6E-73 T 14-10-2018 IPR023809 Thiopeptide-type bacteriocin biosynthesis domain DB29_02694 8be27a15a04f8e6a0bf64f5e04a84104 1049 Pfam PF04738 Lantibiotic dehydratase, C terminus 46 702 1.2E-187 T 14-10-2018 IPR006827 Lantibiotic dehydratase, N-terminal DB29_02694 8be27a15a04f8e6a0bf64f5e04a84104 1049 Pfam PF14028 Lantibiotic biosynthesis dehydratase C-term 775 1031 1.7E-36 T 14-10-2018 IPR023809 Thiopeptide-type bacteriocin biosynthesis domain DB29_01461 ea9b1a7ddf52b8f8b33772b0ab7a4aa8 331 Gene3D G3DSA:3.40.50.300 3 330 3.6E-107 T 14-10-2018 DB29_01461 ea9b1a7ddf52b8f8b33772b0ab7a4aa8 331 SUPERFAMILY SSF52540 5 255 8.05E-80 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_01461 ea9b1a7ddf52b8f8b33772b0ab7a4aa8 331 ProSitePatterns PS00211 ABC transporters family signature. 156 170 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB29_01461 ea9b1a7ddf52b8f8b33772b0ab7a4aa8 331 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 233 320 5.5E-29 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DB29_01461 ea9b1a7ddf52b8f8b33772b0ab7a4aa8 331 Pfam PF00005 ABC transporter 33 183 2.7E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB29_01461 ea9b1a7ddf52b8f8b33772b0ab7a4aa8 331 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 235 300 1.8E-17 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DB29_01461 ea9b1a7ddf52b8f8b33772b0ab7a4aa8 331 SMART SM00382 41 241 3.8E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_00061 986b5d91430718b6b076c7762ceecaa3 250 Pfam PF08241 Methyltransferase domain 54 140 2.4E-8 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 DB29_00061 986b5d91430718b6b076c7762ceecaa3 250 SUPERFAMILY SSF53335 40 184 1.69E-19 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DB29_00061 986b5d91430718b6b076c7762ceecaa3 250 Gene3D G3DSA:3.40.50.150 2 250 2.4E-19 T 14-10-2018 DB29_03137 458ce98a4053d4c9069c27cb18072859 183 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 144 159 7.0E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DB29_03137 458ce98a4053d4c9069c27cb18072859 183 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 159 175 7.0E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DB29_03137 458ce98a4053d4c9069c27cb18072859 183 Pfam PF02805 Metal binding domain of Ada 4 67 8.7E-30 T 14-10-2018 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 DB29_03137 458ce98a4053d4c9069c27cb18072859 183 Pfam PF12833 Helix-turn-helix domain 98 176 7.4E-23 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DB29_03137 458ce98a4053d4c9069c27cb18072859 183 SUPERFAMILY SSF57884 3 82 2.48E-31 T 14-10-2018 IPR035451 Ada-like domain superfamily DB29_03137 458ce98a4053d4c9069c27cb18072859 183 SMART SM00342 92 175 1.3E-32 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DB29_03137 458ce98a4053d4c9069c27cb18072859 183 Gene3D G3DSA:3.40.10.10 1 69 3.5E-30 T 14-10-2018 IPR035451 Ada-like domain superfamily DB29_03137 458ce98a4053d4c9069c27cb18072859 183 PIRSF PIRSF000408 1 183 3.1E-93 T 14-10-2018 IPR016220 Methylphosphotriester-DNA alkyltransferase, AdaA DB29_03137 458ce98a4053d4c9069c27cb18072859 183 SUPERFAMILY SSF46689 128 176 1.75E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DB29_03137 458ce98a4053d4c9069c27cb18072859 183 Gene3D G3DSA:1.10.10.60 70 125 2.1E-15 T 14-10-2018 DB29_03137 458ce98a4053d4c9069c27cb18072859 183 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 129 171 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 DB29_03137 458ce98a4053d4c9069c27cb18072859 183 SUPERFAMILY SSF46689 76 127 8.06E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DB29_03137 458ce98a4053d4c9069c27cb18072859 183 Gene3D G3DSA:1.10.10.60 126 182 2.0E-16 T 14-10-2018 DB29_00791 5389d6a284945256f19a84410672983a 44 Pfam PF13930 DNA/RNA non-specific endonuclease 4 43 3.1E-10 T 14-10-2018 DB29_01179 ff23d657ba746e03a94a968626fe5a48 269 SUPERFAMILY SSF53335 29 195 3.75E-32 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DB29_01179 ff23d657ba746e03a94a968626fe5a48 269 Pfam PF08241 Methyltransferase domain 54 149 3.9E-20 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 DB29_01179 ff23d657ba746e03a94a968626fe5a48 269 Gene3D G3DSA:3.40.50.150 3 256 6.8E-32 T 14-10-2018 DB29_03366 70509e4395cf13b20254b768767b84e4 78 Hamap MF_01542 UPF0349 protein . 1 77 29.481 T 14-10-2018 IPR022916 Protein of unknown function UPF0349 DB29_03366 70509e4395cf13b20254b768767b84e4 78 Pfam PF07293 Protein of unknown function (DUF1450) 1 75 1.2E-35 T 14-10-2018 IPR009910 Protein of unknown function DUF1450 DB29_03366 70509e4395cf13b20254b768767b84e4 78 ProDom PD058324 UPF0349 LMO2392 BLI03401/BL03152 SA0800 SAR0901 LIN2491 SERP0525 GK2958 BT9727_4649 BC4937 1 77 2.0E-39 T 14-10-2018 DB29_00092 47ebfeb2c453c9e48a38daf072086165 390 SUPERFAMILY SSF103263 1 386 4.32E-149 T 14-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 DB29_00092 47ebfeb2c453c9e48a38daf072086165 390 ProSitePatterns PS00787 Chorismate synthase signature 1. 7 22 - T 14-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 DB29_00092 47ebfeb2c453c9e48a38daf072086165 390 ProSitePatterns PS00789 Chorismate synthase signature 3. 339 355 - T 14-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 DB29_00092 47ebfeb2c453c9e48a38daf072086165 390 Hamap MF_00300 Chorismate synthase [aroC]. 1 372 36.35 T 14-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 DB29_00092 47ebfeb2c453c9e48a38daf072086165 390 PIRSF PIRSF001456 1 389 2.1E-134 T 14-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 DB29_00092 47ebfeb2c453c9e48a38daf072086165 390 ProSitePatterns PS00788 Chorismate synthase signature 2. 131 147 - T 14-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 DB29_00092 47ebfeb2c453c9e48a38daf072086165 390 TIGRFAM TIGR00033 aroC: chorismate synthase 1 370 2.9E-131 T 14-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 DB29_00092 47ebfeb2c453c9e48a38daf072086165 390 Gene3D G3DSA:3.60.150.10 1 389 5.5E-155 T 14-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 DB29_00092 47ebfeb2c453c9e48a38daf072086165 390 Pfam PF01264 Chorismate synthase 1 365 1.7E-125 T 14-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 DB29_01290 7728bab3ced1bd9526b4b01bfd797bfd 156 Pfam PF13185 GAF domain 24 143 1.5E-6 T 14-10-2018 IPR003018 GAF domain GO:0005515 DB29_01290 7728bab3ced1bd9526b4b01bfd797bfd 156 SUPERFAMILY SSF55781 18 130 3.08E-11 T 14-10-2018 DB29_01290 7728bab3ced1bd9526b4b01bfd797bfd 156 Gene3D G3DSA:3.30.450.40 9 145 4.4E-35 T 14-10-2018 IPR029016 GAF-like domain superfamily DB29_00532 35be5ad3823ded397b2cedcd15834d10 243 Gene3D G3DSA:3.20.20.190 1 241 5.0E-72 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 DB29_00532 35be5ad3823ded397b2cedcd15834d10 243 SUPERFAMILY SSF51695 3 238 1.72E-69 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 DB29_00532 35be5ad3823ded397b2cedcd15834d10 243 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 8 232 3.3E-43 T 14-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 DB29_01252 9036d752dc6b90138eca878dd934183f 176 ProSitePatterns PS00501 Signal peptidases I serine active site. 51 58 - T 14-10-2018 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 DB29_01252 9036d752dc6b90138eca878dd934183f 176 PRINTS PR00728 Eukaryotic signal peptidase (S26B) family signature 49 64 7.9E-7 T 14-10-2018 IPR001733 Peptidase S26B GO:0006465|GO:0008233|GO:0016020 DB29_01252 9036d752dc6b90138eca878dd934183f 176 PRINTS PR00728 Eukaryotic signal peptidase (S26B) family signature 104 115 7.9E-7 T 14-10-2018 IPR001733 Peptidase S26B GO:0006465|GO:0008233|GO:0016020 DB29_01252 9036d752dc6b90138eca878dd934183f 176 Gene3D G3DSA:2.10.109.10 45 93 1.6E-7 T 14-10-2018 DB29_01252 9036d752dc6b90138eca878dd934183f 176 Pfam PF00717 Peptidase S24-like 48 95 1.6E-10 T 14-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C DB29_01252 9036d752dc6b90138eca878dd934183f 176 SUPERFAMILY SSF51306 42 113 5.36E-12 T 14-10-2018 IPR036286 LexA/Signal peptidase-like superfamily DB29_01252 9036d752dc6b90138eca878dd934183f 176 TIGRFAM TIGR02228 sigpep_I_arch: signal peptidase I 18 164 2.6E-30 T 14-10-2018 IPR001733 Peptidase S26B GO:0006465|GO:0008233|GO:0016020 DB29_0P0032 b377a6dcce5c9cdabede3fb6999b3106 294 Pfam PF13814 Replication-relaxation 45 211 1.2E-11 T 14-10-2018 IPR025855 Plasmid replication-relaxation DB29_0P0032 b377a6dcce5c9cdabede3fb6999b3106 294 SUPERFAMILY SSF46785 40 100 9.49E-5 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_00667 585212e85b988e08dbccc046632a52c4 175 PIRSF PIRSF028345 1 175 8.0E-77 T 14-10-2018 IPR016882 Uncharacterised protein family UPF0374 DB29_00667 585212e85b988e08dbccc046632a52c4 175 Gene3D G3DSA:2.40.380.10 10 170 5.3E-13 T 14-10-2018 IPR035930 FomD-like superfamily DB29_00667 585212e85b988e08dbccc046632a52c4 175 Hamap MF_01568 UPF0374 protein . 1 175 49.386 T 14-10-2018 IPR016882 Uncharacterised protein family UPF0374 DB29_00667 585212e85b988e08dbccc046632a52c4 175 SUPERFAMILY SSF159234 3 171 2.88E-32 T 14-10-2018 IPR035930 FomD-like superfamily DB29_00667 585212e85b988e08dbccc046632a52c4 175 Pfam PF04167 Protein of unknown function (DUF402) 60 124 9.6E-18 T 14-10-2018 IPR007295 Domain of unknown function DUF402 DB29_03416 ea3283d3d38db7bb1337512e72770f51 202 SUPERFAMILY SSF52980 48 153 4.72E-14 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 DB29_03416 ea3283d3d38db7bb1337512e72770f51 202 Pfam PF04471 Restriction endonuclease 43 156 1.0E-22 T 14-10-2018 IPR007560 Restriction endonuclease type IV, Mrr GO:0003677|GO:0004519|GO:0009307 DB29_03416 ea3283d3d38db7bb1337512e72770f51 202 Gene3D G3DSA:3.40.1350.10 46 161 3.8E-5 T 14-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 DB29_01155 e0de5800b4a89913c7d17f5a4e8b4842 144 Pfam PF00583 Acetyltransferase (GNAT) family 29 130 2.3E-10 T 14-10-2018 IPR000182 GNAT domain DB29_01155 e0de5800b4a89913c7d17f5a4e8b4842 144 SUPERFAMILY SSF55729 10 138 7.77E-19 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase DB29_01155 e0de5800b4a89913c7d17f5a4e8b4842 144 Gene3D G3DSA:3.40.630.30 2 140 9.8E-21 T 14-10-2018 DB29_04293 4ecf03779fabed744ab2fc8a72d41a69 279 Gene3D G3DSA:3.20.20.60 1 271 2.3E-113 T 14-10-2018 DB29_04293 4ecf03779fabed744ab2fc8a72d41a69 279 SUPERFAMILY SSF51621 3 263 6.28E-103 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 DB29_04293 4ecf03779fabed744ab2fc8a72d41a69 279 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 2 263 43.123 T 14-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 DB29_04293 4ecf03779fabed744ab2fc8a72d41a69 279 Pfam PF02548 Ketopantoate hydroxymethyltransferase 3 259 4.9E-110 T 14-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 DB29_04293 4ecf03779fabed744ab2fc8a72d41a69 279 PIRSF PIRSF000388 1 266 1.4E-108 T 14-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 DB29_04293 4ecf03779fabed744ab2fc8a72d41a69 279 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 2 263 1.2E-107 T 14-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 DB29_03845 e7d5548e9848282797dada0bcd36ddd5 555 SUPERFAMILY SSF56281 11 423 5.33E-95 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DB29_03845 e7d5548e9848282797dada0bcd36ddd5 555 TIGRFAM TIGR00649 MG423: beta-CASP ribonuclease, RNase J family 10 553 1.2E-222 T 14-10-2018 IPR004613 Ribonuclease J GO:0003723|GO:0046872 DB29_03845 e7d5548e9848282797dada0bcd36ddd5 555 ProSitePatterns PS01292 Uncharacterized protein family UPF0036 signature. 364 392 - T 14-10-2018 IPR001587 Ribonuclease J, conserved site DB29_03845 e7d5548e9848282797dada0bcd36ddd5 555 PIRSF PIRSF004803 1 555 9.6E-244 T 14-10-2018 IPR030854 Ribonuclease J, bacteria GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0090501 DB29_03845 e7d5548e9848282797dada0bcd36ddd5 555 Hamap MF_01491 Ribonuclease J [rnj]. 4 555 47.356 T 14-10-2018 IPR030854 Ribonuclease J, bacteria GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0090501 DB29_03845 e7d5548e9848282797dada0bcd36ddd5 555 Gene3D G3DSA:3.60.15.10 12 442 8.4E-190 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DB29_03845 e7d5548e9848282797dada0bcd36ddd5 555 Gene3D G3DSA:3.10.20.580 449 555 8.2E-38 T 14-10-2018 DB29_03845 e7d5548e9848282797dada0bcd36ddd5 555 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 362 407 7.6E-10 T 14-10-2018 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain DB29_03845 e7d5548e9848282797dada0bcd36ddd5 555 Pfam PF00753 Metallo-beta-lactamase superfamily 20 167 1.8E-15 T 14-10-2018 IPR001279 Metallo-beta-lactamase DB29_03845 e7d5548e9848282797dada0bcd36ddd5 555 Gene3D G3DSA:3.40.50.10710 207 357 8.4E-190 T 14-10-2018 DB29_03845 e7d5548e9848282797dada0bcd36ddd5 555 SMART SM00849 21 215 9.2E-21 T 14-10-2018 IPR001279 Metallo-beta-lactamase DB29_00731 b20e081f25026de137cab9ca48485657 675 Pfam PF13245 AAA domain 183 488 1.7E-10 T 14-10-2018 DB29_00731 b20e081f25026de137cab9ca48485657 675 Pfam PF13538 UvrD-like helicase C-terminal domain 616 663 5.9E-9 T 14-10-2018 IPR027785 UvrD-like helicase C-terminal domain DB29_00731 b20e081f25026de137cab9ca48485657 675 SUPERFAMILY SSF52540 172 668 1.04E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_00731 b20e081f25026de137cab9ca48485657 675 Gene3D G3DSA:3.40.50.300 335 510 4.9E-6 T 14-10-2018 DB29_00731 b20e081f25026de137cab9ca48485657 675 Gene3D G3DSA:3.40.50.300 171 318 5.6E-13 T 14-10-2018 DB29_00731 b20e081f25026de137cab9ca48485657 675 Gene3D G3DSA:3.40.50.300 513 675 3.7E-45 T 14-10-2018 DB29_02807 1ec2800fb3e2411238bd7ed37dabb17a 197 ProSitePatterns PS01081 TetR-type HTH domain signature. 26 57 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site DB29_02807 1ec2800fb3e2411238bd7ed37dabb17a 197 SUPERFAMILY SSF46689 7 77 1.28E-14 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DB29_02807 1ec2800fb3e2411238bd7ed37dabb17a 197 Gene3D G3DSA:1.10.357.10 4 194 4.9E-28 T 14-10-2018 DB29_02807 1ec2800fb3e2411238bd7ed37dabb17a 197 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 35 58 3.8E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DB29_02807 1ec2800fb3e2411238bd7ed37dabb17a 197 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 14 27 3.8E-5 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DB29_02807 1ec2800fb3e2411238bd7ed37dabb17a 197 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 58 1.4E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DB29_02807 1ec2800fb3e2411238bd7ed37dabb17a 197 SUPERFAMILY SSF48498 84 196 1.38E-7 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily DB29_02864 fbcdfb59326cc1de6573b694a955dda3 292 SMART SM00382 26 210 4.5E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_02864 fbcdfb59326cc1de6573b694a955dda3 292 SUPERFAMILY SSF52540 2 212 2.71E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_02864 fbcdfb59326cc1de6573b694a955dda3 292 Pfam PF00005 ABC transporter 17 155 1.8E-18 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB29_02864 fbcdfb59326cc1de6573b694a955dda3 292 Gene3D G3DSA:3.40.50.300 1 232 5.0E-43 T 14-10-2018 DB29_04217 e7ee341bdc349288ef34cd8a03dc3ea6 174 SUPERFAMILY SSF88659 108 163 9.35E-13 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like DB29_04217 e7ee341bdc349288ef34cd8a03dc3ea6 174 Gene3D G3DSA:1.10.10.10 93 166 8.7E-12 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_04217 e7ee341bdc349288ef34cd8a03dc3ea6 174 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 89 164 2.7E-12 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 DB29_04217 e7ee341bdc349288ef34cd8a03dc3ea6 174 Pfam PF08281 Sigma-70, region 4 108 161 2.0E-11 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DB29_01180 2c7fb015ec284508d338414ddb0de335 733 SUPERFAMILY SSF82866 472 703 3.27E-29 T 14-10-2018 DB29_01180 2c7fb015ec284508d338414ddb0de335 733 Pfam PF03176 MMPL family 475 706 2.7E-37 T 14-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 DB29_01180 2c7fb015ec284508d338414ddb0de335 733 Pfam PF03176 MMPL family 46 373 2.3E-51 T 14-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 DB29_01180 2c7fb015ec284508d338414ddb0de335 733 Gene3D G3DSA:1.20.1640.10 153 345 5.9E-7 T 14-10-2018 DB29_01180 2c7fb015ec284508d338414ddb0de335 733 Gene3D G3DSA:1.20.1640.10 515 703 4.5E-6 T 14-10-2018 DB29_01180 2c7fb015ec284508d338414ddb0de335 733 SUPERFAMILY SSF82866 138 337 3.53E-25 T 14-10-2018 DB29_00687 76c1c77715f0e378b84f8af0c0cb3e20 259 Pfam PF01522 Polysaccharide deacetylase 62 184 8.7E-32 T 14-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 DB29_00687 76c1c77715f0e378b84f8af0c0cb3e20 259 SUPERFAMILY SSF88713 53 252 3.95E-61 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 DB29_00687 76c1c77715f0e378b84f8af0c0cb3e20 259 Gene3D G3DSA:3.20.20.370 17 255 3.2E-81 T 14-10-2018 DB29_00687 76c1c77715f0e378b84f8af0c0cb3e20 259 TIGRFAM TIGR02884 spore_pdaA: delta-lactam-biosynthetic de-N-acetylase 30 252 9.8E-114 T 14-10-2018 IPR014235 Peptidoglycan-N-acetylmuramic acid deacetylase PdaA DB29_00394 5c686a11f47b33f8210d2a3781901d77 235 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 49 223 1.7E-30 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 DB29_00394 5c686a11f47b33f8210d2a3781901d77 235 Gene3D G3DSA:1.10.10.10 160 233 1.2E-14 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_00394 5c686a11f47b33f8210d2a3781901d77 235 Gene3D G3DSA:1.20.120.1810 19 122 1.4E-23 T 14-10-2018 DB29_00394 5c686a11f47b33f8210d2a3781901d77 235 Pfam PF04542 Sigma-70 region 2 54 122 9.0E-17 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 DB29_00394 5c686a11f47b33f8210d2a3781901d77 235 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 78 91 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DB29_00394 5c686a11f47b33f8210d2a3781901d77 235 PIRSF PIRSF000770 2 234 2.1E-87 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DB29_00394 5c686a11f47b33f8210d2a3781901d77 235 SUPERFAMILY SSF88659 139 226 4.86E-21 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like DB29_00394 5c686a11f47b33f8210d2a3781901d77 235 TIGRFAM TIGR02846 spore_sigmaK: RNA polymerase sigma-K factor 5 228 3.0E-111 T 14-10-2018 IPR014209 RNA polymerase sigma-K type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DB29_00394 5c686a11f47b33f8210d2a3781901d77 235 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 197 223 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DB29_00394 5c686a11f47b33f8210d2a3781901d77 235 PRINTS PR00046 Major sigma-70 factor signature 78 91 1.5E-13 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DB29_00394 5c686a11f47b33f8210d2a3781901d77 235 PRINTS PR00046 Major sigma-70 factor signature 176 188 1.5E-13 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DB29_00394 5c686a11f47b33f8210d2a3781901d77 235 PRINTS PR00046 Major sigma-70 factor signature 197 212 1.5E-13 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DB29_00394 5c686a11f47b33f8210d2a3781901d77 235 PRINTS PR00046 Major sigma-70 factor signature 212 223 1.5E-13 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DB29_00394 5c686a11f47b33f8210d2a3781901d77 235 Pfam PF04545 Sigma-70, region 4 173 224 1.1E-16 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 DB29_00394 5c686a11f47b33f8210d2a3781901d77 235 SUPERFAMILY SSF88946 8 120 2.35E-33 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 DB29_00482 3ec6b93a62efd7669f4fa6e02b2332f8 458 TIGRFAM TIGR00562 proto_IX_ox: protoporphyrinogen oxidase 3 455 1.9E-99 T 14-10-2018 IPR004572 Protoporphyrinogen oxidase GO:0004729|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.4|MetaCyc: PWY-7159|Reactome: R-HSA-189451 DB29_00482 3ec6b93a62efd7669f4fa6e02b2332f8 458 Gene3D G3DSA:1.10.3110.10 103 197 9.1E-134 T 14-10-2018 DB29_00482 3ec6b93a62efd7669f4fa6e02b2332f8 458 Pfam PF01593 Flavin containing amine oxidoreductase 14 453 5.6E-63 T 14-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 DB29_00482 3ec6b93a62efd7669f4fa6e02b2332f8 458 Gene3D G3DSA:3.50.50.60 7 445 9.1E-134 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB29_00482 3ec6b93a62efd7669f4fa6e02b2332f8 458 Gene3D G3DSA:3.90.660.20 37 404 9.1E-134 T 14-10-2018 DB29_00482 3ec6b93a62efd7669f4fa6e02b2332f8 458 SUPERFAMILY SSF51905 4 454 3.37E-49 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB29_00482 3ec6b93a62efd7669f4fa6e02b2332f8 458 SUPERFAMILY SSF54373 298 405 9.32E-31 T 14-10-2018 DB29_00727 113caa6072810b46bade9c0ec1728048 500 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 262 450 1.9E-60 T 14-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 DB29_00727 113caa6072810b46bade9c0ec1728048 500 Hamap MF_00186 Glycerol kinase [glpK]. 3 497 59.19 T 14-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 DB29_00727 113caa6072810b46bade9c0ec1728048 500 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 5 252 6.0E-86 T 14-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 DB29_00727 113caa6072810b46bade9c0ec1728048 500 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 5 495 2.6E-225 T 14-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 DB29_00727 113caa6072810b46bade9c0ec1728048 500 PIRSF PIRSF000538 3 499 7.3E-180 T 14-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 DB29_00727 113caa6072810b46bade9c0ec1728048 500 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 135 147 - T 14-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 DB29_00727 113caa6072810b46bade9c0ec1728048 500 Gene3D G3DSA:3.30.420.40 254 499 3.8E-92 T 14-10-2018 DB29_00727 113caa6072810b46bade9c0ec1728048 500 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 362 382 - T 14-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 DB29_00727 113caa6072810b46bade9c0ec1728048 500 SUPERFAMILY SSF53067 5 255 1.09E-95 T 14-10-2018 DB29_00727 113caa6072810b46bade9c0ec1728048 500 SUPERFAMILY SSF53067 255 493 3.89E-86 T 14-10-2018 DB29_00727 113caa6072810b46bade9c0ec1728048 500 Gene3D G3DSA:3.30.420.40 1 253 1.7E-110 T 14-10-2018 DB29_04064 eb68d9b6073142a6b10c772d1833c818 296 PIRSF PIRSF001365 5 296 3.4E-89 T 14-10-2018 IPR002220 DapA-like GO:0016829 DB29_04064 eb68d9b6073142a6b10c772d1833c818 296 Gene3D G3DSA:3.20.20.70 2 294 5.7E-106 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DB29_04064 eb68d9b6073142a6b10c772d1833c818 296 Pfam PF00701 Dihydrodipicolinate synthetase family 10 290 1.3E-99 T 14-10-2018 IPR002220 DapA-like GO:0016829 DB29_04064 eb68d9b6073142a6b10c772d1833c818 296 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 10 291 2.1E-105 T 14-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DB29_04064 eb68d9b6073142a6b10c772d1833c818 296 PRINTS PR00146 Dihydrodipicolinate synthase signature 108 124 1.6E-33 T 14-10-2018 IPR002220 DapA-like GO:0016829 DB29_04064 eb68d9b6073142a6b10c772d1833c818 296 PRINTS PR00146 Dihydrodipicolinate synthase signature 40 61 1.6E-33 T 14-10-2018 IPR002220 DapA-like GO:0016829 DB29_04064 eb68d9b6073142a6b10c772d1833c818 296 PRINTS PR00146 Dihydrodipicolinate synthase signature 76 94 1.6E-33 T 14-10-2018 IPR002220 DapA-like GO:0016829 DB29_04064 eb68d9b6073142a6b10c772d1833c818 296 PRINTS PR00146 Dihydrodipicolinate synthase signature 133 150 1.6E-33 T 14-10-2018 IPR002220 DapA-like GO:0016829 DB29_04064 eb68d9b6073142a6b10c772d1833c818 296 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 6 292 60.098 T 14-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DB29_04064 eb68d9b6073142a6b10c772d1833c818 296 SUPERFAMILY SSF51569 10 291 1.78E-97 T 14-10-2018 DB29_04064 eb68d9b6073142a6b10c772d1833c818 296 SMART SM01130 6 294 2.0E-129 T 14-10-2018 IPR002220 DapA-like GO:0016829 DB29_04064 eb68d9b6073142a6b10c772d1833c818 296 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 138 168 - T 14-10-2018 IPR020625 Schiff base-forming aldolase, active site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 DB29_01452 e3b80ffd9250fcd0ab0bf590986edc2d 391 Gene3D G3DSA:3.30.360.10 135 384 4.0E-75 T 14-10-2018 DB29_01452 e3b80ffd9250fcd0ab0bf590986edc2d 391 Gene3D G3DSA:3.40.50.720 2 134 3.1E-40 T 14-10-2018 DB29_01452 e3b80ffd9250fcd0ab0bf590986edc2d 391 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 144 214 1.8E-9 T 14-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 DB29_01452 e3b80ffd9250fcd0ab0bf590986edc2d 391 SUPERFAMILY SSF55347 138 314 1.42E-39 T 14-10-2018 DB29_01452 e3b80ffd9250fcd0ab0bf590986edc2d 391 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 6 130 1.4E-23 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 DB29_01452 e3b80ffd9250fcd0ab0bf590986edc2d 391 SUPERFAMILY SSF51735 4 164 7.54E-51 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_00527 08572a779231554708c294e4a2522da3 535 Pfam PF01266 FAD dependent oxidoreductase 23 333 1.0E-27 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 DB29_00527 08572a779231554708c294e4a2522da3 535 Gene3D G3DSA:1.10.8.870 407 534 2.7E-40 T 14-10-2018 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 DB29_00527 08572a779231554708c294e4a2522da3 535 Gene3D G3DSA:3.30.9.10 104 335 3.0E-81 T 14-10-2018 DB29_00527 08572a779231554708c294e4a2522da3 535 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 35 45 6.5E-21 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 DB29_00527 08572a779231554708c294e4a2522da3 535 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 358 370 6.5E-21 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 DB29_00527 08572a779231554708c294e4a2522da3 535 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 51 63 6.5E-21 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 DB29_00527 08572a779231554708c294e4a2522da3 535 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 22 34 6.5E-21 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 DB29_00527 08572a779231554708c294e4a2522da3 535 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 96 108 6.5E-21 T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 DB29_00527 08572a779231554708c294e4a2522da3 535 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 390 518 1.1E-24 T 14-10-2018 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 DB29_00527 08572a779231554708c294e4a2522da3 535 SUPERFAMILY SSF51905 7 237 5.65E-28 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB29_00527 08572a779231554708c294e4a2522da3 535 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 27 44 - T 14-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 DB29_00527 08572a779231554708c294e4a2522da3 535 Gene3D G3DSA:3.50.50.60 21 370 3.0E-81 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB29_03234 c27d37a3c5b11e837b3069ae5f4dffa3 390 Pfam PF13180 PDZ domain 294 341 8.3E-8 T 14-10-2018 IPR001478 PDZ domain GO:0005515 DB29_03234 c27d37a3c5b11e837b3069ae5f4dffa3 390 SUPERFAMILY SSF50156 299 379 8.02E-13 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 DB29_03234 c27d37a3c5b11e837b3069ae5f4dffa3 390 Gene3D G3DSA:2.30.42.10 272 361 4.6E-12 T 14-10-2018 DB29_03234 c27d37a3c5b11e837b3069ae5f4dffa3 390 SMART SM00228 273 356 3.6E-5 T 14-10-2018 IPR001478 PDZ domain GO:0005515 DB29_02999 e68ffe71c98a928aa76bdc6a5e73fe6b 283 SUPERFAMILY SSF46689 179 228 3.49E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DB29_02999 e68ffe71c98a928aa76bdc6a5e73fe6b 283 Pfam PF02311 AraC-like ligand binding domain 18 138 6.5E-11 T 14-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 DB29_02999 e68ffe71c98a928aa76bdc6a5e73fe6b 283 SUPERFAMILY SSF51215 24 158 5.75E-17 T 14-10-2018 IPR037923 Transcription regulator HTH-like DB29_02999 e68ffe71c98a928aa76bdc6a5e73fe6b 283 SUPERFAMILY SSF46689 230 279 1.39E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DB29_02999 e68ffe71c98a928aa76bdc6a5e73fe6b 283 Pfam PF12833 Helix-turn-helix domain 202 279 1.6E-22 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DB29_02999 e68ffe71c98a928aa76bdc6a5e73fe6b 283 Gene3D G3DSA:2.60.120.10 19 172 4.2E-9 T 14-10-2018 IPR014710 RmlC-like jelly roll fold DB29_02999 e68ffe71c98a928aa76bdc6a5e73fe6b 283 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 231 273 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 DB29_02999 e68ffe71c98a928aa76bdc6a5e73fe6b 283 SMART SM00342 194 277 1.7E-24 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DB29_02999 e68ffe71c98a928aa76bdc6a5e73fe6b 283 Gene3D G3DSA:1.10.10.60 231 282 3.3E-17 T 14-10-2018 DB29_02999 e68ffe71c98a928aa76bdc6a5e73fe6b 283 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 246 261 2.3E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DB29_02999 e68ffe71c98a928aa76bdc6a5e73fe6b 283 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 261 277 2.3E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DB29_02999 e68ffe71c98a928aa76bdc6a5e73fe6b 283 Gene3D G3DSA:1.10.10.60 173 230 1.7E-15 T 14-10-2018 DB29_03530 a1a4e6e984ba4d184f9f822af515350a 324 SUPERFAMILY SSF52096 6 314 1.01E-101 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily DB29_03530 a1a4e6e984ba4d184f9f822af515350a 324 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 6 318 8.6E-148 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 DB29_03530 a1a4e6e984ba4d184f9f822af515350a 324 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 152 165 1.2E-44 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 DB29_03530 a1a4e6e984ba4d184f9f822af515350a 324 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 133 149 1.2E-44 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 DB29_03530 a1a4e6e984ba4d184f9f822af515350a 324 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 196 205 1.2E-44 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 DB29_03530 a1a4e6e984ba4d184f9f822af515350a 324 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 87 98 1.2E-44 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 DB29_03530 a1a4e6e984ba4d184f9f822af515350a 324 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 112 130 1.2E-44 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 DB29_03530 a1a4e6e984ba4d184f9f822af515350a 324 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 168 181 1.2E-44 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 DB29_03530 a1a4e6e984ba4d184f9f822af515350a 324 Gene3D G3DSA:3.90.226.10 2 315 1.2E-120 T 14-10-2018 DB29_03530 a1a4e6e984ba4d184f9f822af515350a 324 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 6 147 9.2E-62 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 DB29_03530 a1a4e6e984ba4d184f9f822af515350a 324 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 4 315 48.489 T 14-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 DB29_03268 2fb44abb79913b6d258307d8b38664ef 381 Gene3D G3DSA:3.10.580.10 246 371 7.3E-32 T 14-10-2018 DB29_03268 2fb44abb79913b6d258307d8b38664ef 381 SUPERFAMILY SSF54631 248 370 2.12E-24 T 14-10-2018 DB29_03268 2fb44abb79913b6d258307d8b38664ef 381 SMART SM00116 317 365 2.9E-7 T 14-10-2018 IPR000644 CBS domain DB29_03268 2fb44abb79913b6d258307d8b38664ef 381 SMART SM00116 257 305 0.0096 T 14-10-2018 IPR000644 CBS domain DB29_03268 2fb44abb79913b6d258307d8b38664ef 381 SMART SM00382 26 212 4.7E-18 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_03268 2fb44abb79913b6d258307d8b38664ef 381 SUPERFAMILY SSF52540 1 239 2.35E-78 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_03268 2fb44abb79913b6d258307d8b38664ef 381 Pfam PF00571 CBS domain 250 296 3.0E-7 T 14-10-2018 IPR000644 CBS domain DB29_03268 2fb44abb79913b6d258307d8b38664ef 381 Pfam PF00571 CBS domain 310 362 2.4E-8 T 14-10-2018 IPR000644 CBS domain DB29_03268 2fb44abb79913b6d258307d8b38664ef 381 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 14 370 7.6E-152 T 14-10-2018 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 DB29_03268 2fb44abb79913b6d258307d8b38664ef 381 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB29_03268 2fb44abb79913b6d258307d8b38664ef 381 Pfam PF00005 ABC transporter 17 162 2.0E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB29_03268 2fb44abb79913b6d258307d8b38664ef 381 Gene3D G3DSA:3.40.50.300 1 239 1.0E-77 T 14-10-2018 DB29_01650 aa812dc368506edc785852e21fd49aae 298 Gene3D G3DSA:1.10.10.60 174 226 1.4E-15 T 14-10-2018 DB29_01650 aa812dc368506edc785852e21fd49aae 298 SUPERFAMILY SSF46689 178 226 3.31E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DB29_01650 aa812dc368506edc785852e21fd49aae 298 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 260 276 9.8E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DB29_01650 aa812dc368506edc785852e21fd49aae 298 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 245 260 9.8E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DB29_01650 aa812dc368506edc785852e21fd49aae 298 Pfam PF02311 AraC-like ligand binding domain 26 161 9.0E-10 T 14-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 DB29_01650 aa812dc368506edc785852e21fd49aae 298 Pfam PF12833 Helix-turn-helix domain 199 278 2.0E-21 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DB29_01650 aa812dc368506edc785852e21fd49aae 298 Gene3D G3DSA:1.10.10.60 227 283 3.6E-18 T 14-10-2018 DB29_01650 aa812dc368506edc785852e21fd49aae 298 SUPERFAMILY SSF51182 30 102 1.05E-12 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily DB29_01650 aa812dc368506edc785852e21fd49aae 298 SMART SM00342 193 276 1.3E-29 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DB29_01650 aa812dc368506edc785852e21fd49aae 298 Gene3D G3DSA:2.60.120.10 16 87 3.3E-12 T 14-10-2018 IPR014710 RmlC-like jelly roll fold DB29_01650 aa812dc368506edc785852e21fd49aae 298 SUPERFAMILY SSF46689 229 281 2.51E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DB29_03222 1129a3c6247305c1044664cfca78bdc5 132 PIRSF PIRSF039090 2 127 3.5E-30 T 14-10-2018 IPR003713 Flagellar protein FliS GO:0044780 DB29_03222 1129a3c6247305c1044664cfca78bdc5 132 TIGRFAM TIGR00208 fliS: flagellar protein FliS 8 119 1.3E-29 T 14-10-2018 IPR003713 Flagellar protein FliS GO:0044780 DB29_03222 1129a3c6247305c1044664cfca78bdc5 132 Gene3D G3DSA:1.20.120.340 3 121 1.9E-32 T 14-10-2018 DB29_03222 1129a3c6247305c1044664cfca78bdc5 132 Pfam PF02561 Flagellar protein FliS 9 117 6.7E-35 T 14-10-2018 IPR003713 Flagellar protein FliS GO:0044780 DB29_03222 1129a3c6247305c1044664cfca78bdc5 132 SUPERFAMILY SSF101116 6 123 5.23E-34 T 14-10-2018 IPR036584 Flagellar protein FliS superfamily GO:0044780 DB29_03110 ac7d93ae6c3ecdf7a9087713074d71d7 363 Gene3D G3DSA:3.40.50.2000 170 349 1.5E-68 T 14-10-2018 DB29_03110 ac7d93ae6c3ecdf7a9087713074d71d7 363 Gene3D G3DSA:3.40.50.2000 13 359 1.5E-68 T 14-10-2018 DB29_03110 ac7d93ae6c3ecdf7a9087713074d71d7 363 Pfam PF13439 Glycosyltransferase Family 4 12 172 4.6E-17 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 DB29_03110 ac7d93ae6c3ecdf7a9087713074d71d7 363 Pfam PF00534 Glycosyl transferases group 1 192 348 2.6E-36 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 DB29_03110 ac7d93ae6c3ecdf7a9087713074d71d7 363 SUPERFAMILY SSF53756 2 363 6.73E-72 T 14-10-2018 DB29_03702 55d5742dfde275cb79725c7ac88f849c 1049 Gene3D G3DSA:3.30.470.20 662 921 6.8E-87 T 14-10-2018 DB29_03702 55d5742dfde275cb79725c7ac88f849c 1049 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 3 971 0.0 T 14-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DB29_03702 55d5742dfde275cb79725c7ac88f849c 1049 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 423 542 6.6E-37 T 14-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DB29_03702 55d5742dfde275cb79725c7ac88f849c 1049 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 203 222 1.3E-62 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DB29_03702 55d5742dfde275cb79725c7ac88f849c 1049 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 377 395 1.3E-62 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DB29_03702 55d5742dfde275cb79725c7ac88f849c 1049 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 295 324 1.3E-62 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DB29_03702 55d5742dfde275cb79725c7ac88f849c 1049 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 18 32 1.3E-62 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DB29_03702 55d5742dfde275cb79725c7ac88f849c 1049 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 167 179 1.3E-62 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DB29_03702 55d5742dfde275cb79725c7ac88f849c 1049 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 238 255 1.3E-62 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DB29_03702 55d5742dfde275cb79725c7ac88f849c 1049 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 47 57 1.3E-62 T 14-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DB29_03702 55d5742dfde275cb79725c7ac88f849c 1049 SUPERFAMILY SSF52440 552 670 1.12E-44 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily DB29_03702 55d5742dfde275cb79725c7ac88f849c 1049 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 704 718 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 DB29_03702 55d5742dfde275cb79725c7ac88f849c 1049 Gene3D G3DSA:3.40.50.20 549 657 2.4E-44 T 14-10-2018 DB29_03702 55d5742dfde275cb79725c7ac88f849c 1049 Gene3D G3DSA:3.30.470.20 119 400 5.4E-123 T 14-10-2018 DB29_03702 55d5742dfde275cb79725c7ac88f849c 1049 SUPERFAMILY SSF56059 127 398 1.61E-106 T 14-10-2018 DB29_03702 55d5742dfde275cb79725c7ac88f849c 1049 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1032 12.226 T 14-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DB29_03702 55d5742dfde275cb79725c7ac88f849c 1049 Gene3D G3DSA:1.10.1030.10 406 548 2.8E-40 T 14-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DB29_03702 55d5742dfde275cb79725c7ac88f849c 1049 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 163 177 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 DB29_03702 55d5742dfde275cb79725c7ac88f849c 1049 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 831 838 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 DB29_03702 55d5742dfde275cb79725c7ac88f849c 1049 SUPERFAMILY SSF56059 668 923 6.01E-83 T 14-10-2018 DB29_03702 55d5742dfde275cb79725c7ac88f849c 1049 SMART SM01096 419 542 2.2E-55 T 14-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DB29_03702 55d5742dfde275cb79725c7ac88f849c 1049 Gene3D G3DSA:3.40.50.20 1 115 2.8E-44 T 14-10-2018 DB29_03702 55d5742dfde275cb79725c7ac88f849c 1049 SUPERFAMILY SSF52440 4 126 5.61E-46 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily DB29_03702 55d5742dfde275cb79725c7ac88f849c 1049 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 127 332 4.5E-79 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 DB29_03702 55d5742dfde275cb79725c7ac88f849c 1049 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 668 868 1.0E-33 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 DB29_03702 55d5742dfde275cb79725c7ac88f849c 1049 SUPERFAMILY SSF48108 393 549 1.28E-46 T 14-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DB29_03702 55d5742dfde275cb79725c7ac88f849c 1049 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 295 302 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 DB29_03702 55d5742dfde275cb79725c7ac88f849c 1049 Gene3D G3DSA:3.30.1490.20 681 749 6.8E-87 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 DB29_03891 ce2be7ba222ed0ac7bb76a65e243629b 256 Gene3D G3DSA:3.30.470.80 149 255 5.7E-19 T 14-10-2018 DB29_03891 ce2be7ba222ed0ac7bb76a65e243629b 256 Pfam PF08443 RimK-like ATP-grasp domain 84 234 3.4E-25 T 14-10-2018 IPR013651 ATP-grasp fold, RimK-type Reactome: R-HSA-70614 DB29_03891 ce2be7ba222ed0ac7bb76a65e243629b 256 Gene3D G3DSA:3.30.1490.20 86 148 1.2E-7 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 DB29_03891 ce2be7ba222ed0ac7bb76a65e243629b 256 SUPERFAMILY SSF56059 59 249 5.05E-37 T 14-10-2018 DB29_01193 3ce37e0a2925b94a473060f3279d5752 116 Gene3D G3DSA:2.30.30.110 1 116 1.1E-51 T 14-10-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor DB29_01193 3ce37e0a2925b94a473060f3279d5752 116 SUPERFAMILY SSF50118 2 113 2.62E-40 T 14-10-2018 DB29_01193 3ce37e0a2925b94a473060f3279d5752 116 PIRSF PIRSF033490 1 113 1.9E-38 T 14-10-2018 IPR003477 mRNA interferase PemK-like GO:0003677 DB29_01193 3ce37e0a2925b94a473060f3279d5752 116 Pfam PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system 4 110 9.9E-32 T 14-10-2018 IPR003477 mRNA interferase PemK-like GO:0003677 DB29_00049 65185b0e6508bbd28fcd2b450c7c0d25 201 Pfam PF09819 ABC-type cobalt transport system, permease component 10 126 1.3E-34 T 14-10-2018 IPR017195 ABC-type thiamin-related transport system, permease component 1, predicted DB29_00049 65185b0e6508bbd28fcd2b450c7c0d25 201 PIRSF PIRSF037394 1 192 1.5E-62 T 14-10-2018 IPR017195 ABC-type thiamin-related transport system, permease component 1, predicted DB29_02150 b1e233ff1514bb1f1de86feeb1434268 458 SUPERFAMILY SSF53850 83 449 8.8E-81 T 14-10-2018 DB29_02150 b1e233ff1514bb1f1de86feeb1434268 458 Gene3D G3DSA:3.40.190.10 196 445 2.2E-121 T 14-10-2018 DB29_02150 b1e233ff1514bb1f1de86feeb1434268 458 Pfam PF13416 Bacterial extracellular solute-binding protein 103 397 1.1E-42 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein DB29_02150 b1e233ff1514bb1f1de86feeb1434268 458 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 190 207 - T 14-10-2018 IPR006061 Solute-binding family 1, conserved site GO:0055085 DB29_02150 b1e233ff1514bb1f1de86feeb1434268 458 PRINTS PR00181 Maltose binding protein signature 413 432 3.3E-6 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 DB29_02150 b1e233ff1514bb1f1de86feeb1434268 458 PRINTS PR00181 Maltose binding protein signature 187 206 3.3E-6 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 DB29_02150 b1e233ff1514bb1f1de86feeb1434268 458 PRINTS PR00181 Maltose binding protein signature 127 145 3.3E-6 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 DB29_02150 b1e233ff1514bb1f1de86feeb1434268 458 PRINTS PR00181 Maltose binding protein signature 208 227 3.3E-6 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 DB29_02150 b1e233ff1514bb1f1de86feeb1434268 458 Gene3D G3DSA:3.40.190.10 100 413 2.2E-121 T 14-10-2018 DB29_04043 29365f58d777541ae9179d84b90bde63 556 Pfam PF03129 Anticodon binding domain 462 551 1.5E-17 T 14-10-2018 IPR004154 Anticodon-binding DB29_04043 29365f58d777541ae9179d84b90bde63 556 SUPERFAMILY SSF55826 208 375 6.15E-33 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 DB29_04043 29365f58d777541ae9179d84b90bde63 556 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 555 39.408 T 14-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 DB29_04043 29365f58d777541ae9179d84b90bde63 556 SUPERFAMILY SSF55681 3 463 1.61E-99 T 14-10-2018 DB29_04043 29365f58d777541ae9179d84b90bde63 556 SUPERFAMILY SSF52954 450 555 5.73E-28 T 14-10-2018 DB29_04043 29365f58d777541ae9179d84b90bde63 556 Pfam PF04073 Aminoacyl-tRNA editing domain 247 361 2.7E-27 T 14-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 DB29_04043 29365f58d777541ae9179d84b90bde63 556 Gene3D G3DSA:3.40.50.800 452 539 9.6E-239 T 14-10-2018 IPR036621 Anticodon-binding domain superfamily DB29_04043 29365f58d777541ae9179d84b90bde63 556 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 85 445 2.2E-49 T 14-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 DB29_04043 29365f58d777541ae9179d84b90bde63 556 Gene3D G3DSA:3.30.930.10 1 451 9.6E-239 T 14-10-2018 DB29_04043 29365f58d777541ae9179d84b90bde63 556 Gene3D G3DSA:3.90.960.10 230 375 9.6E-239 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 DB29_04043 29365f58d777541ae9179d84b90bde63 556 PRINTS PR01046 Prolyl-tRNA synthetase signature 94 105 2.9E-18 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 DB29_04043 29365f58d777541ae9179d84b90bde63 556 PRINTS PR01046 Prolyl-tRNA synthetase signature 124 132 2.9E-18 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 DB29_04043 29365f58d777541ae9179d84b90bde63 556 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 145 2.9E-18 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 DB29_04043 29365f58d777541ae9179d84b90bde63 556 PRINTS PR01046 Prolyl-tRNA synthetase signature 58 76 2.9E-18 T 14-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 DB29_04043 29365f58d777541ae9179d84b90bde63 556 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 2 551 1.4E-218 T 14-10-2018 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 DB29_02674 771c61e9d344e60a4f3fc04409db4e8c 880 PIRSF PIRSF010631 1 878 1.3E-279 T 14-10-2018 IPR016007 Alpha-L-rhamnosidase DB29_02674 771c61e9d344e60a4f3fc04409db4e8c 880 Gene3D G3DSA:2.60.40.10 1 105 3.3E-30 T 14-10-2018 IPR013783 Immunoglobulin-like fold DB29_02674 771c61e9d344e60a4f3fc04409db4e8c 880 Gene3D G3DSA:1.50.10.10 106 880 7.0E-278 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 DB29_02674 771c61e9d344e60a4f3fc04409db4e8c 880 Pfam PF05592 Bacterial alpha-L-rhamnosidase concanavalin-like domain 306 406 3.3E-30 T 14-10-2018 IPR008902 Alpha-L-rhamnosidase, concanavalin-like domain DB29_02674 771c61e9d344e60a4f3fc04409db4e8c 880 SUPERFAMILY SSF48208 408 830 1.36E-47 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 DB29_02674 771c61e9d344e60a4f3fc04409db4e8c 880 Pfam PF08531 Alpha-L-rhamnosidase N-terminal domain 138 296 3.8E-46 T 14-10-2018 IPR013737 Bacterial alpha-L-rhamnosidase N-terminal DB29_02674 771c61e9d344e60a4f3fc04409db4e8c 880 Pfam PF17389 Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain 410 760 6.1E-123 T 14-10-2018 IPR035396 Alpha-L-rhamnosidase, six-hairpin glycosidase domain DB29_02674 771c61e9d344e60a4f3fc04409db4e8c 880 Pfam PF17390 Bacterial alpha-L-rhamnosidase C-terminal domain 762 834 3.6E-17 T 14-10-2018 IPR035398 Alpha-L-rhamnosidase C-terminal domain DB29_01124 4762aa769f1a38b0d593288cdafc0e6f 222 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 36 221 1.6E-17 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DB29_01124 4762aa769f1a38b0d593288cdafc0e6f 222 Gene3D G3DSA:1.10.3720.10 8 220 3.3E-45 T 14-10-2018 IPR035906 MetI-like superfamily DB29_01124 4762aa769f1a38b0d593288cdafc0e6f 222 SUPERFAMILY SSF161098 11 207 9.94E-40 T 14-10-2018 IPR035906 MetI-like superfamily DB29_03108 8894a78c99dcb910575317056bdce411 485 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 345 457 5.5E-16 T 14-10-2018 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain DB29_03108 8894a78c99dcb910575317056bdce411 485 Pfam PF13440 Polysaccharide biosynthesis protein 28 318 2.0E-20 T 14-10-2018 DB29_02939 990f505299c497b493cc57705373f667 187 Pfam PF07563 Protein of unknown function (DUF1541) 132 181 2.1E-24 T 14-10-2018 IPR011438 Domain of unknown function DUF1541 DB29_02939 990f505299c497b493cc57705373f667 187 Pfam PF07563 Protein of unknown function (DUF1541) 68 119 1.9E-25 T 14-10-2018 IPR011438 Domain of unknown function DUF1541 DB29_02939 990f505299c497b493cc57705373f667 187 Gene3D G3DSA:2.30.30.1210 43 186 2.2E-63 T 14-10-2018 DB29_01037 71d000e4b9ac99d403fa1453f8c43698 150 Pfam PF08020 Protein of unknown function (DUF1706) 4 146 1.0E-49 T 14-10-2018 IPR012550 Protein of unknown function DUF1706 DB29_01037 71d000e4b9ac99d403fa1453f8c43698 150 PIRSF PIRSF031551 1 150 6.7E-53 T 14-10-2018 IPR012550 Protein of unknown function DUF1706 DB29_01037 71d000e4b9ac99d403fa1453f8c43698 150 Gene3D G3DSA:1.20.120.450 1 148 3.3E-63 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes DB29_01780 60b9e9192f829b6a4a09dd3e9c4b6379 219 SUPERFAMILY SSF51735 3 132 3.04E-38 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_01780 60b9e9192f829b6a4a09dd3e9c4b6379 219 Pfam PF02254 TrkA-N domain 5 120 7.2E-28 T 14-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 DB29_01780 60b9e9192f829b6a4a09dd3e9c4b6379 219 SUPERFAMILY SSF116726 132 215 3.01E-18 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 DB29_01780 60b9e9192f829b6a4a09dd3e9c4b6379 219 Pfam PF02080 TrkA-C domain 150 215 4.7E-13 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 DB29_01780 60b9e9192f829b6a4a09dd3e9c4b6379 219 Gene3D G3DSA:3.30.70.1450 138 218 1.6E-25 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 DB29_01780 60b9e9192f829b6a4a09dd3e9c4b6379 219 Gene3D G3DSA:3.40.50.720 1 137 2.4E-38 T 14-10-2018 DB29_03996 532abe6ec167c0552ee652c84229a000 386 Gene3D G3DSA:3.30.470.20 1 234 4.9E-97 T 14-10-2018 DB29_03996 532abe6ec167c0552ee652c84229a000 386 Hamap MF_00558 Succinate--CoA ligase [ADP-forming] subunit beta [sucC]. 1 386 45.022 T 14-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 DB29_03996 532abe6ec167c0552ee652c84229a000 386 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 385 1.4E-166 T 14-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 DB29_03996 532abe6ec167c0552ee652c84229a000 386 Gene3D G3DSA:3.30.1490.20 21 104 4.9E-97 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 DB29_03996 532abe6ec167c0552ee652c84229a000 386 Pfam PF00549 CoA-ligase 262 381 7.9E-26 T 14-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 DB29_03996 532abe6ec167c0552ee652c84229a000 386 PIRSF PIRSF001554 1 386 3.4E-154 T 14-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 DB29_03996 532abe6ec167c0552ee652c84229a000 386 Pfam PF08442 ATP-grasp domain 2 202 1.7E-83 T 14-10-2018 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 DB29_03996 532abe6ec167c0552ee652c84229a000 386 SUPERFAMILY SSF56059 1 238 6.23E-86 T 14-10-2018 DB29_03996 532abe6ec167c0552ee652c84229a000 386 SUPERFAMILY SSF52210 242 385 9.16E-54 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 DB29_03996 532abe6ec167c0552ee652c84229a000 386 Gene3D G3DSA:3.40.50.261 240 386 3.7E-56 T 14-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 DB29_02201 bb3e90a29237cad52b683dff75f1c2e5 367 SUPERFAMILY SSF53597 145 361 8.0E-62 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 DB29_02201 bb3e90a29237cad52b683dff75f1c2e5 367 SUPERFAMILY SSF53927 2 138 4.43E-42 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 DB29_02201 bb3e90a29237cad52b683dff75f1c2e5 367 Gene3D G3DSA:3.40.140.10 1 134 1.8E-43 T 14-10-2018 DB29_02201 bb3e90a29237cad52b683dff75f1c2e5 367 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 49 87 - T 14-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 DB29_02201 bb3e90a29237cad52b683dff75f1c2e5 367 Pfam PF01872 RibD C-terminal domain 146 356 1.2E-55 T 14-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 DB29_02201 bb3e90a29237cad52b683dff75f1c2e5 367 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 2 98 1.3E-20 T 14-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain DB29_02201 bb3e90a29237cad52b683dff75f1c2e5 367 Gene3D G3DSA:3.40.430.10 135 360 3.4E-73 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 DB29_02201 bb3e90a29237cad52b683dff75f1c2e5 367 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 145 359 5.0E-70 T 14-10-2018 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 DB29_02201 bb3e90a29237cad52b683dff75f1c2e5 367 PIRSF PIRSF006769 1 363 1.3E-129 T 14-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 DB29_02201 bb3e90a29237cad52b683dff75f1c2e5 367 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 6 357 2.0E-119 T 14-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 DB29_04340 6ffbe2fda647294b6e3ec92579bab22c 289 Gene3D G3DSA:3.30.1240.10 81 207 1.1E-79 T 14-10-2018 DB29_04340 6ffbe2fda647294b6e3ec92579bab22c 289 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 3 278 1.2E-58 T 14-10-2018 IPR000150 Cof family GO:0016787 DB29_04340 6ffbe2fda647294b6e3ec92579bab22c 289 Pfam PF08282 haloacid dehalogenase-like hydrolase 4 278 2.1E-64 T 14-10-2018 DB29_04340 6ffbe2fda647294b6e3ec92579bab22c 289 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 3 251 5.8E-29 T 14-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 DB29_04340 6ffbe2fda647294b6e3ec92579bab22c 289 Gene3D G3DSA:3.40.50.1000 2 275 1.1E-79 T 14-10-2018 IPR023214 HAD superfamily DB29_04340 6ffbe2fda647294b6e3ec92579bab22c 289 SUPERFAMILY SSF56784 1 283 1.68E-66 T 14-10-2018 IPR036412 HAD-like superfamily DB29_00912 d495c3dd2a26bf5f10c53f85dd47cac6 748 Gene3D G3DSA:1.10.10.160 117 191 5.8E-108 T 14-10-2018 IPR013986 DExx box DNA helicase domain superfamily DB29_00912 d495c3dd2a26bf5f10c53f85dd47cac6 748 Gene3D G3DSA:3.40.50.300 284 639 2.1E-134 T 14-10-2018 DB29_00912 d495c3dd2a26bf5f10c53f85dd47cac6 748 Gene3D G3DSA:3.40.50.300 13 278 5.8E-108 T 14-10-2018 DB29_00912 d495c3dd2a26bf5f10c53f85dd47cac6 748 Gene3D G3DSA:1.10.486.10 387 552 2.1E-134 T 14-10-2018 DB29_00912 d495c3dd2a26bf5f10c53f85dd47cac6 748 Pfam PF00580 UvrD/REP helicase N-terminal domain 13 276 3.9E-83 T 14-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 DB29_00912 d495c3dd2a26bf5f10c53f85dd47cac6 748 TIGRFAM TIGR01073 pcrA: ATP-dependent DNA helicase PcrA 9 745 0.0 T 14-10-2018 IPR005751 ATP-dependent DNA helicase PcrA GO:0004003|GO:0005737|GO:0006268 DB29_00912 d495c3dd2a26bf5f10c53f85dd47cac6 748 Pfam PF13361 UvrD-like helicase C-terminal domain 281 622 4.2E-76 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 DB29_00912 d495c3dd2a26bf5f10c53f85dd47cac6 748 SUPERFAMILY SSF52540 5 648 1.39E-188 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_00825 6de6875ffca47ac799e02fb661d99afc 3169 SUPERFAMILY SSF49401 2976 3073 5.22E-5 T 14-10-2018 IPR008966 Adhesion domain superfamily DB29_00825 6de6875ffca47ac799e02fb661d99afc 3169 SUPERFAMILY SSF49401 2028 2138 6.21E-11 T 14-10-2018 IPR008966 Adhesion domain superfamily DB29_00825 6de6875ffca47ac799e02fb661d99afc 3169 SUPERFAMILY SSF49401 989 1112 2.14E-9 T 14-10-2018 IPR008966 Adhesion domain superfamily DB29_00825 6de6875ffca47ac799e02fb661d99afc 3169 SUPERFAMILY SSF82171 241 471 3.92E-11 T 14-10-2018 DB29_00825 6de6875ffca47ac799e02fb661d99afc 3169 Gene3D G3DSA:2.120.10.30 298 422 3.4E-6 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like DB29_00825 6de6875ffca47ac799e02fb661d99afc 3169 Gene3D G3DSA:2.60.40.740 1882 2007 8.5E-11 T 14-10-2018 DB29_00825 6de6875ffca47ac799e02fb661d99afc 3169 Gene3D G3DSA:2.60.40.740 2019 2149 7.0E-9 T 14-10-2018 DB29_00825 6de6875ffca47ac799e02fb661d99afc 3169 SUPERFAMILY SSF49401 511 618 4.22E-10 T 14-10-2018 IPR008966 Adhesion domain superfamily DB29_00825 6de6875ffca47ac799e02fb661d99afc 3169 SUPERFAMILY SSF49401 1617 1715 1.22E-7 T 14-10-2018 IPR008966 Adhesion domain superfamily DB29_00825 6de6875ffca47ac799e02fb661d99afc 3169 TIGRFAM TIGR04226 RrgB_K2N_iso_D2: fimbrial isopeptide formation D2 domain 2158 2263 8.7E-12 T 14-10-2018 IPR026466 Fimbrial isopeptide formation D2 domain DB29_00825 6de6875ffca47ac799e02fb661d99afc 3169 TIGRFAM TIGR04226 RrgB_K2N_iso_D2: fimbrial isopeptide formation D2 domain 503 609 1.3E-7 T 14-10-2018 IPR026466 Fimbrial isopeptide formation D2 domain DB29_00825 6de6875ffca47ac799e02fb661d99afc 3169 TIGRFAM TIGR04226 RrgB_K2N_iso_D2: fimbrial isopeptide formation D2 domain 57 163 1.5E-10 T 14-10-2018 IPR026466 Fimbrial isopeptide formation D2 domain DB29_00825 6de6875ffca47ac799e02fb661d99afc 3169 TIGRFAM TIGR04226 RrgB_K2N_iso_D2: fimbrial isopeptide formation D2 domain 1741 1854 3.9E-8 T 14-10-2018 IPR026466 Fimbrial isopeptide formation D2 domain DB29_00825 6de6875ffca47ac799e02fb661d99afc 3169 TIGRFAM TIGR04226 RrgB_K2N_iso_D2: fimbrial isopeptide formation D2 domain 1881 1986 2.3E-10 T 14-10-2018 IPR026466 Fimbrial isopeptide formation D2 domain DB29_00825 6de6875ffca47ac799e02fb661d99afc 3169 TIGRFAM TIGR04226 RrgB_K2N_iso_D2: fimbrial isopeptide formation D2 domain 2962 3065 1.1E-9 T 14-10-2018 IPR026466 Fimbrial isopeptide formation D2 domain DB29_00825 6de6875ffca47ac799e02fb661d99afc 3169 TIGRFAM TIGR04226 RrgB_K2N_iso_D2: fimbrial isopeptide formation D2 domain 2420 2527 9.4E-12 T 14-10-2018 IPR026466 Fimbrial isopeptide formation D2 domain DB29_00825 6de6875ffca47ac799e02fb661d99afc 3169 TIGRFAM TIGR04226 RrgB_K2N_iso_D2: fimbrial isopeptide formation D2 domain 1604 1709 2.3E-10 T 14-10-2018 IPR026466 Fimbrial isopeptide formation D2 domain DB29_00825 6de6875ffca47ac799e02fb661d99afc 3169 TIGRFAM TIGR04226 RrgB_K2N_iso_D2: fimbrial isopeptide formation D2 domain 2699 2804 9.8E-10 T 14-10-2018 IPR026466 Fimbrial isopeptide formation D2 domain DB29_00825 6de6875ffca47ac799e02fb661d99afc 3169 TIGRFAM TIGR04226 RrgB_K2N_iso_D2: fimbrial isopeptide formation D2 domain 2830 2935 1.1E-10 T 14-10-2018 IPR026466 Fimbrial isopeptide formation D2 domain DB29_00825 6de6875ffca47ac799e02fb661d99afc 3169 TIGRFAM TIGR04226 RrgB_K2N_iso_D2: fimbrial isopeptide formation D2 domain 2289 2395 1.0E-8 T 14-10-2018 IPR026466 Fimbrial isopeptide formation D2 domain DB29_00825 6de6875ffca47ac799e02fb661d99afc 3169 SUPERFAMILY SSF49401 2171 2269 5.96E-8 T 14-10-2018 IPR008966 Adhesion domain superfamily DB29_00825 6de6875ffca47ac799e02fb661d99afc 3169 SUPERFAMILY SSF49401 2302 2401 4.47E-8 T 14-10-2018 IPR008966 Adhesion domain superfamily DB29_00825 6de6875ffca47ac799e02fb661d99afc 3169 Gene3D G3DSA:2.60.40.740 2693 2809 6.8E-12 T 14-10-2018 DB29_00825 6de6875ffca47ac799e02fb661d99afc 3169 Gene3D G3DSA:2.60.40.740 493 623 2.9E-11 T 14-10-2018 DB29_00825 6de6875ffca47ac799e02fb661d99afc 3169 Gene3D G3DSA:2.60.40.740 2284 2399 1.5E-12 T 14-10-2018 DB29_00825 6de6875ffca47ac799e02fb661d99afc 3169 Gene3D G3DSA:2.60.40.740 2557 2692 5.1E-11 T 14-10-2018 DB29_00825 6de6875ffca47ac799e02fb661d99afc 3169 Gene3D G3DSA:2.60.40.740 2956 3111 4.9E-13 T 14-10-2018 DB29_00825 6de6875ffca47ac799e02fb661d99afc 3169 Gene3D G3DSA:2.60.40.740 2825 2953 1.7E-12 T 14-10-2018 DB29_00825 6de6875ffca47ac799e02fb661d99afc 3169 Gene3D G3DSA:2.60.40.740 1598 1724 3.3E-13 T 14-10-2018 DB29_00825 6de6875ffca47ac799e02fb661d99afc 3169 Gene3D G3DSA:2.60.40.740 975 1120 2.6E-5 T 14-10-2018 DB29_00825 6de6875ffca47ac799e02fb661d99afc 3169 Gene3D G3DSA:2.60.40.740 2416 2556 1.4E-11 T 14-10-2018 DB29_00825 6de6875ffca47ac799e02fb661d99afc 3169 Gene3D G3DSA:2.60.40.740 2151 2265 5.9E-13 T 14-10-2018 DB29_00825 6de6875ffca47ac799e02fb661d99afc 3169 Gene3D G3DSA:2.60.40.740 1737 1881 2.5E-11 T 14-10-2018 DB29_00825 6de6875ffca47ac799e02fb661d99afc 3169 Gene3D G3DSA:2.60.40.740 1451 1580 6.7E-9 T 14-10-2018 DB29_00825 6de6875ffca47ac799e02fb661d99afc 3169 SUPERFAMILY SSF49401 1475 1583 1.86E-8 T 14-10-2018 IPR008966 Adhesion domain superfamily DB29_00825 6de6875ffca47ac799e02fb661d99afc 3169 SUPERFAMILY SSF49401 1751 1861 3.48E-11 T 14-10-2018 IPR008966 Adhesion domain superfamily DB29_00825 6de6875ffca47ac799e02fb661d99afc 3169 Pfam PF00746 LPXTG cell wall anchor motif 3131 3167 1.1E-5 T 14-10-2018 IPR019948 Gram-positive LPXTG cell wall anchor DB29_00825 6de6875ffca47ac799e02fb661d99afc 3169 TIGRFAM TIGR01167 LPXTG_anchor: LPXTG cell wall anchor domain 3135 3167 8.3E-6 T 14-10-2018 DB29_00825 6de6875ffca47ac799e02fb661d99afc 3169 Pfam PF01345 Domain of unknown function DUF11 2169 2260 1.7E-9 T 14-10-2018 IPR001434 Domain of unknown function DUF11 DB29_00825 6de6875ffca47ac799e02fb661d99afc 3169 Pfam PF01345 Domain of unknown function DUF11 2566 2669 2.8E-9 T 14-10-2018 IPR001434 Domain of unknown function DUF11 DB29_00825 6de6875ffca47ac799e02fb661d99afc 3169 Pfam PF01345 Domain of unknown function DUF11 1310 1360 2.8E-10 T 14-10-2018 IPR001434 Domain of unknown function DUF11 DB29_00825 6de6875ffca47ac799e02fb661d99afc 3169 Pfam PF01345 Domain of unknown function DUF11 2433 2522 1.1E-7 T 14-10-2018 IPR001434 Domain of unknown function DUF11 DB29_00825 6de6875ffca47ac799e02fb661d99afc 3169 Pfam PF01345 Domain of unknown function DUF11 2294 2380 9.2E-9 T 14-10-2018 IPR001434 Domain of unknown function DUF11 DB29_00825 6de6875ffca47ac799e02fb661d99afc 3169 Pfam PF01345 Domain of unknown function DUF11 507 608 1.2E-7 T 14-10-2018 IPR001434 Domain of unknown function DUF11 DB29_00825 6de6875ffca47ac799e02fb661d99afc 3169 Pfam PF01345 Domain of unknown function DUF11 2025 2128 5.3E-9 T 14-10-2018 IPR001434 Domain of unknown function DUF11 DB29_00825 6de6875ffca47ac799e02fb661d99afc 3169 Pfam PF01345 Domain of unknown function DUF11 2974 3055 7.3E-7 T 14-10-2018 IPR001434 Domain of unknown function DUF11 DB29_00825 6de6875ffca47ac799e02fb661d99afc 3169 Pfam PF01345 Domain of unknown function DUF11 1472 1574 3.7E-6 T 14-10-2018 IPR001434 Domain of unknown function DUF11 DB29_00825 6de6875ffca47ac799e02fb661d99afc 3169 Pfam PF01345 Domain of unknown function DUF11 2842 2933 4.4E-10 T 14-10-2018 IPR001434 Domain of unknown function DUF11 DB29_00825 6de6875ffca47ac799e02fb661d99afc 3169 Pfam PF01345 Domain of unknown function DUF11 1609 1705 1.8E-9 T 14-10-2018 IPR001434 Domain of unknown function DUF11 DB29_00825 6de6875ffca47ac799e02fb661d99afc 3169 Pfam PF01345 Domain of unknown function DUF11 1892 1971 9.4E-8 T 14-10-2018 IPR001434 Domain of unknown function DUF11 DB29_00825 6de6875ffca47ac799e02fb661d99afc 3169 Pfam PF01345 Domain of unknown function DUF11 1750 1851 3.5E-9 T 14-10-2018 IPR001434 Domain of unknown function DUF11 DB29_00825 6de6875ffca47ac799e02fb661d99afc 3169 Pfam PF01345 Domain of unknown function DUF11 2699 2793 1.2E-9 T 14-10-2018 IPR001434 Domain of unknown function DUF11 DB29_00825 6de6875ffca47ac799e02fb661d99afc 3169 Pfam PF01345 Domain of unknown function DUF11 977 1034 1.3E-9 T 14-10-2018 IPR001434 Domain of unknown function DUF11 DB29_00825 6de6875ffca47ac799e02fb661d99afc 3169 Gene3D G3DSA:2.60.40.740 54 186 5.7E-9 T 14-10-2018 DB29_00825 6de6875ffca47ac799e02fb661d99afc 3169 SUPERFAMILY SSF49401 2844 2944 1.17E-7 T 14-10-2018 IPR008966 Adhesion domain superfamily DB29_00825 6de6875ffca47ac799e02fb661d99afc 3169 Gene3D G3DSA:2.60.40.740 1306 1449 3.3E-8 T 14-10-2018 DB29_00825 6de6875ffca47ac799e02fb661d99afc 3169 SUPERFAMILY SSF49401 1322 1431 1.09E-8 T 14-10-2018 IPR008966 Adhesion domain superfamily DB29_00825 6de6875ffca47ac799e02fb661d99afc 3169 Gene3D G3DSA:2.60.120.260 1127 1302 2.8E-6 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily DB29_00825 6de6875ffca47ac799e02fb661d99afc 3169 SUPERFAMILY SSF49401 2711 2811 2.98E-8 T 14-10-2018 IPR008966 Adhesion domain superfamily DB29_00825 6de6875ffca47ac799e02fb661d99afc 3169 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 2976 3019 4.2E-9 T 14-10-2018 IPR001434 Domain of unknown function DUF11 DB29_00825 6de6875ffca47ac799e02fb661d99afc 3169 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 989 1027 4.3E-10 T 14-10-2018 IPR001434 Domain of unknown function DUF11 DB29_00825 6de6875ffca47ac799e02fb661d99afc 3169 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 1471 1521 9.7E-9 T 14-10-2018 IPR001434 Domain of unknown function DUF11 DB29_00825 6de6875ffca47ac799e02fb661d99afc 3169 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 650 690 1.6E-9 T 14-10-2018 IPR001434 Domain of unknown function DUF11 DB29_00825 6de6875ffca47ac799e02fb661d99afc 3169 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 1748 1798 5.5E-12 T 14-10-2018 IPR001434 Domain of unknown function DUF11 DB29_00825 6de6875ffca47ac799e02fb661d99afc 3169 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 2709 2755 1.1E-10 T 14-10-2018 IPR001434 Domain of unknown function DUF11 DB29_00825 6de6875ffca47ac799e02fb661d99afc 3169 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 2844 2887 2.4E-8 T 14-10-2018 IPR001434 Domain of unknown function DUF11 DB29_00825 6de6875ffca47ac799e02fb661d99afc 3169 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 1894 1937 1.3E-9 T 14-10-2018 IPR001434 Domain of unknown function DUF11 DB29_00825 6de6875ffca47ac799e02fb661d99afc 3169 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 1611 1660 7.7E-11 T 14-10-2018 IPR001434 Domain of unknown function DUF11 DB29_00825 6de6875ffca47ac799e02fb661d99afc 3169 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 2025 2075 5.5E-12 T 14-10-2018 IPR001434 Domain of unknown function DUF11 DB29_00825 6de6875ffca47ac799e02fb661d99afc 3169 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 2298 2346 3.4E-11 T 14-10-2018 IPR001434 Domain of unknown function DUF11 DB29_00825 6de6875ffca47ac799e02fb661d99afc 3169 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 506 556 1.9E-9 T 14-10-2018 IPR001434 Domain of unknown function DUF11 DB29_00825 6de6875ffca47ac799e02fb661d99afc 3169 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 2171 2214 1.1E-10 T 14-10-2018 IPR001434 Domain of unknown function DUF11 DB29_00825 6de6875ffca47ac799e02fb661d99afc 3169 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 1318 1360 1.2E-12 T 14-10-2018 IPR001434 Domain of unknown function DUF11 DB29_00825 6de6875ffca47ac799e02fb661d99afc 3169 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 2566 2616 3.1E-12 T 14-10-2018 IPR001434 Domain of unknown function DUF11 DB29_00825 6de6875ffca47ac799e02fb661d99afc 3169 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 2435 2478 1.5E-9 T 14-10-2018 IPR001434 Domain of unknown function DUF11 DB29_00825 6de6875ffca47ac799e02fb661d99afc 3169 SUPERFAMILY SSF49401 2437 2534 8.45E-7 T 14-10-2018 IPR008966 Adhesion domain superfamily DB29_00825 6de6875ffca47ac799e02fb661d99afc 3169 SUPERFAMILY SSF49401 651 773 1.09E-9 T 14-10-2018 IPR008966 Adhesion domain superfamily DB29_00825 6de6875ffca47ac799e02fb661d99afc 3169 SUPERFAMILY SSF49401 1894 1993 9.44E-8 T 14-10-2018 IPR008966 Adhesion domain superfamily DB29_00825 6de6875ffca47ac799e02fb661d99afc 3169 SUPERFAMILY SSF49401 2569 2679 1.37E-10 T 14-10-2018 IPR008966 Adhesion domain superfamily DB29_0P0003 172a9ff283b1019b042d8e1d56070469 397 SUPERFAMILY SSF53955 105 256 1.44E-32 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily DB29_0P0003 172a9ff283b1019b042d8e1d56070469 397 SUPERFAMILY SSF54001 269 395 1.21E-29 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily DB29_0P0003 172a9ff283b1019b042d8e1d56070469 397 Pfam PF01464 Transglycosylase SLT domain 115 160 2.7E-5 T 14-10-2018 IPR008258 Transglycosylase SLT domain 1 DB29_0P0003 172a9ff283b1019b042d8e1d56070469 397 Gene3D G3DSA:1.10.530.10 110 260 1.8E-18 T 14-10-2018 DB29_0P0003 172a9ff283b1019b042d8e1d56070469 397 Pfam PF13406 Transglycosylase SLT domain 190 228 1.8E-6 T 14-10-2018 IPR031304 Transglycosylase SLT domain 2 DB29_0P0003 172a9ff283b1019b042d8e1d56070469 397 Gene3D G3DSA:3.90.1720.10 268 397 1.6E-31 T 14-10-2018 DB29_0P0003 172a9ff283b1019b042d8e1d56070469 397 Pfam PF00877 NlpC/P60 family 284 391 4.4E-23 T 14-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain DB29_00775 0c2b870efc31284e73ee8785da738e96 302 Pfam PF02311 AraC-like ligand binding domain 31 113 2.3E-8 T 14-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 DB29_00775 0c2b870efc31284e73ee8785da738e96 302 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 243 285 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 DB29_00775 0c2b870efc31284e73ee8785da738e96 302 Pfam PF12833 Helix-turn-helix domain 213 290 1.7E-19 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DB29_00775 0c2b870efc31284e73ee8785da738e96 302 Gene3D G3DSA:1.10.10.60 185 239 6.1E-12 T 14-10-2018 DB29_00775 0c2b870efc31284e73ee8785da738e96 302 SUPERFAMILY SSF46689 243 294 5.82E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DB29_00775 0c2b870efc31284e73ee8785da738e96 302 Gene3D G3DSA:1.10.10.60 240 294 1.3E-15 T 14-10-2018 DB29_00775 0c2b870efc31284e73ee8785da738e96 302 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 273 289 3.6E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DB29_00775 0c2b870efc31284e73ee8785da738e96 302 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 258 273 3.6E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DB29_00775 0c2b870efc31284e73ee8785da738e96 302 SUPERFAMILY SSF46689 192 239 5.73E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DB29_00775 0c2b870efc31284e73ee8785da738e96 302 SUPERFAMILY SSF51215 11 174 8.76E-22 T 14-10-2018 IPR037923 Transcription regulator HTH-like DB29_00775 0c2b870efc31284e73ee8785da738e96 302 SMART SM00342 206 289 3.4E-27 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DB29_01052 b08a9902491ed26b2833e111a45fe65a 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 1.3E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DB29_01052 b08a9902491ed26b2833e111a45fe65a 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 1.3E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DB29_01052 b08a9902491ed26b2833e111a45fe65a 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 1.3E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DB29_01052 b08a9902491ed26b2833e111a45fe65a 311 SUPERFAMILY SSF53850 92 301 3.26E-32 T 14-10-2018 DB29_01052 b08a9902491ed26b2833e111a45fe65a 311 Pfam PF03466 LysR substrate binding domain 92 295 2.7E-30 T 14-10-2018 IPR005119 LysR, substrate-binding DB29_01052 b08a9902491ed26b2833e111a45fe65a 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 64 1.2E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DB29_01052 b08a9902491ed26b2833e111a45fe65a 311 SUPERFAMILY SSF46785 5 88 4.61E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_01052 b08a9902491ed26b2833e111a45fe65a 311 Gene3D G3DSA:3.40.190.10 170 275 1.5E-35 T 14-10-2018 DB29_01052 b08a9902491ed26b2833e111a45fe65a 311 Gene3D G3DSA:1.10.10.10 1 92 2.2E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_01052 b08a9902491ed26b2833e111a45fe65a 311 Gene3D G3DSA:3.40.190.10 95 291 1.5E-35 T 14-10-2018 DB29_04035 5e3fd539afc2aa393332e9ab5d5320d5 242 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 158 182 - T 14-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 DB29_04035 5e3fd539afc2aa393332e9ab5d5320d5 242 Pfam PF00318 Ribosomal protein S2 9 224 2.2E-102 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DB29_04035 5e3fd539afc2aa393332e9ab5d5320d5 242 SUPERFAMILY SSF52313 6 228 1.44E-101 T 14-10-2018 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily DB29_04035 5e3fd539afc2aa393332e9ab5d5320d5 242 PRINTS PR00395 Ribosomal protein S2 signature 37 46 1.4E-42 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DB29_04035 5e3fd539afc2aa393332e9ab5d5320d5 242 PRINTS PR00395 Ribosomal protein S2 signature 158 175 1.4E-42 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DB29_04035 5e3fd539afc2aa393332e9ab5d5320d5 242 PRINTS PR00395 Ribosomal protein S2 signature 6 24 1.4E-42 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DB29_04035 5e3fd539afc2aa393332e9ab5d5320d5 242 PRINTS PR00395 Ribosomal protein S2 signature 87 104 1.4E-42 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DB29_04035 5e3fd539afc2aa393332e9ab5d5320d5 242 PRINTS PR00395 Ribosomal protein S2 signature 175 186 1.4E-42 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DB29_04035 5e3fd539afc2aa393332e9ab5d5320d5 242 PRINTS PR00395 Ribosomal protein S2 signature 196 210 1.4E-42 T 14-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DB29_04035 5e3fd539afc2aa393332e9ab5d5320d5 242 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 6 17 - T 14-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 DB29_04035 5e3fd539afc2aa393332e9ab5d5320d5 242 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 2 228 44.129 T 14-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB29_04035 5e3fd539afc2aa393332e9ab5d5320d5 242 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 3 225 1.4E-114 T 14-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB29_04035 5e3fd539afc2aa393332e9ab5d5320d5 242 Gene3D G3DSA:3.40.50.10490 10 214 1.5E-96 T 14-10-2018 DB29_04035 5e3fd539afc2aa393332e9ab5d5320d5 242 Gene3D G3DSA:1.10.287.610 97 152 1.5E-96 T 14-10-2018 DB29_04266 e4f367607aea5e1c44d92790c92421da 39 SUPERFAMILY SSF109854 2 36 3.94E-7 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes DB29_04266 e4f367607aea5e1c44d92790c92421da 39 Gene3D G3DSA:1.20.120.450 1 35 2.0E-10 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes DB29_01568 3e77e41dede479193e2020a76848da16 402 Gene3D G3DSA:1.20.1250.20 209 400 2.7E-21 T 14-10-2018 DB29_01568 3e77e41dede479193e2020a76848da16 402 Gene3D G3DSA:1.20.1250.20 11 205 4.8E-17 T 14-10-2018 DB29_01568 3e77e41dede479193e2020a76848da16 402 SUPERFAMILY SSF103473 13 395 3.66E-49 T 14-10-2018 IPR036259 MFS transporter superfamily DB29_01568 3e77e41dede479193e2020a76848da16 402 Pfam PF07690 Major Facilitator Superfamily 27 358 1.4E-24 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DB29_01038 176f9a2b497c896022fcdfe4d362051f 666 SMART SM00861 355 526 4.0E-62 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain DB29_01038 176f9a2b497c896022fcdfe4d362051f 666 Gene3D G3DSA:3.40.50.970 332 533 4.1E-75 T 14-10-2018 DB29_01038 176f9a2b497c896022fcdfe4d362051f 666 Gene3D G3DSA:3.40.50.970 7 331 7.7E-117 T 14-10-2018 DB29_01038 176f9a2b497c896022fcdfe4d362051f 666 Pfam PF02779 Transketolase, pyrimidine binding domain 354 524 6.6E-42 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain DB29_01038 176f9a2b497c896022fcdfe4d362051f 666 SUPERFAMILY SSF52518 8 328 1.21E-105 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold DB29_01038 176f9a2b497c896022fcdfe4d362051f 666 SUPERFAMILY SSF52922 531 663 7.71E-35 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 DB29_01038 176f9a2b497c896022fcdfe4d362051f 666 Gene3D G3DSA:3.40.50.920 537 660 3.2E-39 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 DB29_01038 176f9a2b497c896022fcdfe4d362051f 666 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 11 340 6.4E-139 T 14-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 DB29_01038 176f9a2b497c896022fcdfe4d362051f 666 Pfam PF02780 Transketolase, C-terminal domain 552 594 3.7E-6 T 14-10-2018 IPR033248 Transketolase, C-terminal domain DB29_01038 176f9a2b497c896022fcdfe4d362051f 666 TIGRFAM TIGR00232 tktlase_bact: transketolase 13 661 1.5E-264 T 14-10-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 DB29_01038 176f9a2b497c896022fcdfe4d362051f 666 SUPERFAMILY SSF52518 351 528 2.28E-66 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold DB29_03418 c589b20e5326ffdbcd5936e24e1ee408 207 Gene3D G3DSA:3.40.50.300 5 200 2.1E-45 T 14-10-2018 DB29_03418 c589b20e5326ffdbcd5936e24e1ee408 207 SUPERFAMILY SSF52540 4 198 9.77E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_03418 c589b20e5326ffdbcd5936e24e1ee408 207 PIRSF PIRSF000705 2 207 7.9E-54 T 14-10-2018 IPR002624 Deoxynucleoside kinase GO:0005524|GO:0006139|GO:0019206 DB29_03418 c589b20e5326ffdbcd5936e24e1ee408 207 Pfam PF01712 Deoxynucleoside kinase 6 200 2.0E-44 T 14-10-2018 IPR031314 Deoxynucleoside kinase domain DB29_00201 ddb41913e71aae1f0400b4fe4837db8d 146 TIGRFAM TIGR01925 spIIAB: anti-sigma F factor 2 137 2.6E-67 T 14-10-2018 IPR010194 Anti-sigma F factor GO:0004674|GO:0005524|GO:0006468|GO:0016989|GO:0042174|GO:0045892 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 DB29_00201 ddb41913e71aae1f0400b4fe4837db8d 146 SUPERFAMILY SSF55874 28 134 1.27E-22 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB29_00201 ddb41913e71aae1f0400b4fe4837db8d 146 Hamap MF_00637 Anti-sigma F factor [spoIIAB]. 1 140 34.789 T 14-10-2018 IPR010194 Anti-sigma F factor GO:0004674|GO:0005524|GO:0006468|GO:0016989|GO:0042174|GO:0045892 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 DB29_00201 ddb41913e71aae1f0400b4fe4837db8d 146 Pfam PF13581 Histidine kinase-like ATPase domain 9 135 4.6E-20 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DB29_00201 ddb41913e71aae1f0400b4fe4837db8d 146 SMART SM00387 35 140 8.2E-9 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DB29_00201 ddb41913e71aae1f0400b4fe4837db8d 146 Gene3D G3DSA:3.30.565.10 1 143 5.6E-34 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB29_02229 4abe350cf6b505f5635bfc5b9b944b1c 265 Gene3D G3DSA:3.90.1070.10 90 169 1.9E-62 T 14-10-2018 DB29_02229 4abe350cf6b505f5635bfc5b9b944b1c 265 Gene3D G3DSA:3.40.50.1000 12 234 1.9E-62 T 14-10-2018 IPR023214 HAD superfamily DB29_02229 4abe350cf6b505f5635bfc5b9b944b1c 265 ProSitePatterns PS01229 Hypothetical cof family signature 2. 197 219 - T 14-10-2018 DB29_02229 4abe350cf6b505f5635bfc5b9b944b1c 265 SUPERFAMILY SSF56784 8 247 4.14E-68 T 14-10-2018 IPR036412 HAD-like superfamily DB29_02229 4abe350cf6b505f5635bfc5b9b944b1c 265 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 11 216 5.1E-29 T 14-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 DB29_02229 4abe350cf6b505f5635bfc5b9b944b1c 265 Pfam PF08282 haloacid dehalogenase-like hydrolase 12 118 5.7E-27 T 14-10-2018 DB29_02229 4abe350cf6b505f5635bfc5b9b944b1c 265 Pfam PF08282 haloacid dehalogenase-like hydrolase 126 243 2.0E-32 T 14-10-2018 DB29_00162 71ec637b23d5de322219c570fe8cebf9 380 SUPERFAMILY SSF56601 1 269 5.78E-68 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like DB29_00162 71ec637b23d5de322219c570fe8cebf9 380 Gene3D G3DSA:2.30.140.30 269 360 1.4E-14 T 14-10-2018 DB29_00162 71ec637b23d5de322219c570fe8cebf9 380 Gene3D G3DSA:3.40.710.10 32 268 7.5E-89 T 14-10-2018 DB29_00162 71ec637b23d5de322219c570fe8cebf9 380 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 30 252 1.1E-70 T 14-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 DB29_00162 71ec637b23d5de322219c570fe8cebf9 380 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 60 71 2.0E-16 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 DB29_00162 71ec637b23d5de322219c570fe8cebf9 380 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 135 148 2.0E-16 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 DB29_00162 71ec637b23d5de322219c570fe8cebf9 380 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 108 125 2.0E-16 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 DB29_01384 1487b362edd96d20761314e87a92fa1a 243 Gene3D G3DSA:3.20.20.370 1 240 4.4E-74 T 14-10-2018 DB29_01384 1487b362edd96d20761314e87a92fa1a 243 Hamap MF_01246 Chitooligosaccharide deacetylase [chbG]. 1 238 39.012 T 14-10-2018 IPR022948 Chitooligosaccharide deacetylase ChbG-like, bacteria GO:0000272|GO:0016811 DB29_01384 1487b362edd96d20761314e87a92fa1a 243 SUPERFAMILY SSF88713 2 226 4.0E-69 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 DB29_01384 1487b362edd96d20761314e87a92fa1a 243 Pfam PF04794 YdjC-like protein 2 226 1.4E-57 T 14-10-2018 IPR006879 Carbohydrate deacetylase YdjC-like DB29_03116 8d260639e0aa9e63748f22300e02b40a 364 Pfam PF00953 Glycosyl transferase family 4 77 233 3.7E-36 T 14-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 DB29_03116 8d260639e0aa9e63748f22300e02b40a 364 ProSitePatterns PS01348 MraY family signature 2. 151 162 - T 14-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DB29_01355 7bd0e4079e5620459d8c4a1058e5fd5a 425 SUPERFAMILY SSF53187 2 419 4.86E-60 T 14-10-2018 DB29_01355 7bd0e4079e5620459d8c4a1058e5fd5a 425 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 80 89 - T 14-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 DB29_01355 7bd0e4079e5620459d8c4a1058e5fd5a 425 Gene3D G3DSA:3.40.630.10 32 418 2.1E-89 T 14-10-2018 DB29_01355 7bd0e4079e5620459d8c4a1058e5fd5a 425 SUPERFAMILY SSF55031 213 304 4.19E-9 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain DB29_01355 7bd0e4079e5620459d8c4a1058e5fd5a 425 Pfam PF01546 Peptidase family M20/M25/M40 81 415 5.4E-30 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 DB29_01355 7bd0e4079e5620459d8c4a1058e5fd5a 425 Pfam PF07687 Peptidase dimerisation domain 186 307 6.7E-26 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain DB29_01355 7bd0e4079e5620459d8c4a1058e5fd5a 425 TIGRFAM TIGR01910 DapE-ArgE: peptidase, ArgE/DapE family 16 408 1.1E-102 T 14-10-2018 IPR010182 N-formyl-4-amino-5-aminomethyl-2-methylpyrimidine deformylase/Succinyl-diaminopimelate desuccinylase DB29_01355 7bd0e4079e5620459d8c4a1058e5fd5a 425 Gene3D G3DSA:3.30.70.360 189 323 2.1E-89 T 14-10-2018 DB29_00464 30e0199b8a39075c942c9447f2cb3977 333 Gene3D G3DSA:1.10.10.10 258 333 4.8E-32 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_00464 30e0199b8a39075c942c9447f2cb3977 333 SUPERFAMILY SSF46785 257 328 3.81E-24 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_00464 30e0199b8a39075c942c9447f2cb3977 333 Gene3D G3DSA:1.10.8.60 183 257 1.4E-29 T 14-10-2018 DB29_00464 30e0199b8a39075c942c9447f2cb3977 333 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 333 171.046 T 14-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 DB29_00464 30e0199b8a39075c942c9447f2cb3977 333 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 252 328 3.0E-29 T 14-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 DB29_00464 30e0199b8a39075c942c9447f2cb3977 333 SUPERFAMILY SSF52540 21 253 3.02E-54 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_00464 30e0199b8a39075c942c9447f2cb3977 333 SMART SM00382 52 226 4.1E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_00464 30e0199b8a39075c942c9447f2cb3977 333 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 24 327 4.1E-146 T 14-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 DB29_00464 30e0199b8a39075c942c9447f2cb3977 333 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 5 235 7.7E-118 T 14-10-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 DB29_00464 30e0199b8a39075c942c9447f2cb3977 333 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 254 327 1.8E-33 T 14-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 DB29_00464 30e0199b8a39075c942c9447f2cb3977 333 Gene3D G3DSA:3.40.50.300 20 182 6.4E-40 T 14-10-2018 DB29_02388 16d529af8f08cc344e9cecab96d6696e 256 PIRSF PIRSF016557 1 256 1.3E-105 T 14-10-2018 IPR016667 Capsular polysaccharide synthesis, CpsB/CapC GO:0004725|GO:0030145 DB29_02388 16d529af8f08cc344e9cecab96d6696e 256 Gene3D G3DSA:3.20.20.140 1 256 9.3E-94 T 14-10-2018 DB29_02388 16d529af8f08cc344e9cecab96d6696e 256 SUPERFAMILY SSF89550 1 200 8.24E-16 T 14-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 DB29_04370 cb54a9a59d17219d3fa9af4905d3622b 524 SUPERFAMILY SSF161098 22 207 1.57E-41 T 14-10-2018 IPR035906 MetI-like superfamily DB29_04370 cb54a9a59d17219d3fa9af4905d3622b 524 Gene3D G3DSA:3.40.190.10 253 514 1.9E-86 T 14-10-2018 DB29_04370 cb54a9a59d17219d3fa9af4905d3622b 524 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 46 210 6.7E-21 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DB29_04370 cb54a9a59d17219d3fa9af4905d3622b 524 Gene3D G3DSA:3.40.190.120 355 458 1.9E-86 T 14-10-2018 DB29_04370 cb54a9a59d17219d3fa9af4905d3622b 524 Gene3D G3DSA:1.10.3720.10 18 217 8.8E-37 T 14-10-2018 IPR035906 MetI-like superfamily DB29_04370 cb54a9a59d17219d3fa9af4905d3622b 524 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 251 515 4.7E-60 T 14-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 DB29_04370 cb54a9a59d17219d3fa9af4905d3622b 524 SUPERFAMILY SSF53850 251 519 2.66E-65 T 14-10-2018 DB29_01402 f991e21e20d6f3274e19f00ff57126af 374 Gene3D G3DSA:3.40.190.10 141 271 1.6E-25 T 14-10-2018 DB29_01402 f991e21e20d6f3274e19f00ff57126af 374 Gene3D G3DSA:3.40.190.150 43 140 1.6E-25 T 14-10-2018 DB29_03765 a54ab82d1810d6329d8165fe4306445b 64 Pfam PF14038 YqzE-like protein 3 53 1.9E-21 T 14-10-2018 IPR025622 YqzE-like protein DB29_02058 3d46e924458a9f344a99973c8ae701d3 380 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 257 377 1.2E-26 T 14-10-2018 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 DB29_02058 3d46e924458a9f344a99973c8ae701d3 380 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 379 8.0E-111 T 14-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 DB29_02058 3d46e924458a9f344a99973c8ae701d3 380 SMART SM00480 17 375 9.9E-161 T 14-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 DB29_02058 3d46e924458a9f344a99973c8ae701d3 380 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 127 1.8E-35 T 14-10-2018 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 DB29_02058 3d46e924458a9f344a99973c8ae701d3 380 PIRSF PIRSF000804 1 380 1.1E-106 T 14-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 DB29_02058 3d46e924458a9f344a99973c8ae701d3 380 SUPERFAMILY SSF55979 1 127 1.3E-23 T 14-10-2018 DB29_02058 3d46e924458a9f344a99973c8ae701d3 380 SUPERFAMILY SSF55979 133 252 1.08E-27 T 14-10-2018 DB29_02058 3d46e924458a9f344a99973c8ae701d3 380 Gene3D G3DSA:3.10.150.10 1 252 1.3E-124 T 14-10-2018 DB29_02058 3d46e924458a9f344a99973c8ae701d3 380 SUPERFAMILY SSF55979 257 379 3.37E-29 T 14-10-2018 DB29_02058 3d46e924458a9f344a99973c8ae701d3 380 Gene3D G3DSA:3.70.10.10 145 377 1.3E-124 T 14-10-2018 DB29_02058 3d46e924458a9f344a99973c8ae701d3 380 Pfam PF02767 DNA polymerase III beta subunit, central domain 137 252 1.9E-36 T 14-10-2018 IPR022637 DNA polymerase III, beta sliding clamp, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 DB29_03446 5ab889d2535d856d02bcece8af0d3482 285 SUPERFAMILY SSF63829 3 279 6.32E-58 T 14-10-2018 DB29_03446 5ab889d2535d856d02bcece8af0d3482 285 Pfam PF08450 SMP-30/Gluconolaconase/LRE-like region 14 256 5.1E-77 T 14-10-2018 IPR013658 SMP-30/Gluconolactonase/LRE-like region DB29_03446 5ab889d2535d856d02bcece8af0d3482 285 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 194 211 8.7E-42 T 14-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) DB29_03446 5ab889d2535d856d02bcece8af0d3482 285 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 237 255 8.7E-42 T 14-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) DB29_03446 5ab889d2535d856d02bcece8af0d3482 285 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 153 173 8.7E-42 T 14-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) DB29_03446 5ab889d2535d856d02bcece8af0d3482 285 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 89 110 8.7E-42 T 14-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) DB29_03446 5ab889d2535d856d02bcece8af0d3482 285 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 130 152 8.7E-42 T 14-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) DB29_03446 5ab889d2535d856d02bcece8af0d3482 285 PRINTS PR01790 Senescence marker protein-30 (SMP30) family signature 15 32 8.7E-42 T 14-10-2018 IPR005511 Senescence marker protein-30 (SMP-30) DB29_03446 5ab889d2535d856d02bcece8af0d3482 285 Gene3D G3DSA:2.120.10.30 1 282 5.9E-90 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like DB29_04162 38f202ae507f80fa0199118ef8dd6289 204 Pfam PF00196 Bacterial regulatory proteins, luxR family 143 196 2.1E-16 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DB29_04162 38f202ae507f80fa0199118ef8dd6289 204 Gene3D G3DSA:3.40.50.12740 1 202 8.0E-68 T 14-10-2018 DB29_04162 38f202ae507f80fa0199118ef8dd6289 204 Pfam PF00072 Response regulator receiver domain 3 114 3.1E-30 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DB29_04162 38f202ae507f80fa0199118ef8dd6289 204 SUPERFAMILY SSF46894 133 201 6.46E-20 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DB29_04162 38f202ae507f80fa0199118ef8dd6289 204 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 157 173 1.6E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DB29_04162 38f202ae507f80fa0199118ef8dd6289 204 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 143 157 1.6E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DB29_04162 38f202ae507f80fa0199118ef8dd6289 204 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 173 185 1.6E-10 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DB29_04162 38f202ae507f80fa0199118ef8dd6289 204 SUPERFAMILY SSF52172 1 131 9.39E-35 T 14-10-2018 IPR011006 CheY-like superfamily DB29_04162 38f202ae507f80fa0199118ef8dd6289 204 SMART SM00448 1 114 3.3E-33 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DB29_04162 38f202ae507f80fa0199118ef8dd6289 204 SMART SM00421 140 197 6.7E-22 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DB29_02881 fbd30ecbb0bd246a5c46b03f5685469a 319 Gene3D G3DSA:3.40.190.10 112 210 1.6E-85 T 14-10-2018 DB29_02881 fbd30ecbb0bd246a5c46b03f5685469a 319 Gene3D G3DSA:3.40.190.10 34 304 1.6E-85 T 14-10-2018 DB29_02881 fbd30ecbb0bd246a5c46b03f5685469a 319 Gene3D G3DSA:1.10.8.450 242 274 1.6E-85 T 14-10-2018 DB29_02881 fbd30ecbb0bd246a5c46b03f5685469a 319 Pfam PF09084 NMT1/THI5 like 63 239 1.4E-19 T 14-10-2018 IPR015168 SsuA/THI5-like DB29_02881 fbd30ecbb0bd246a5c46b03f5685469a 319 SUPERFAMILY SSF53850 31 260 9.79E-47 T 14-10-2018 DB29_02881 fbd30ecbb0bd246a5c46b03f5685469a 319 SMART SM00062 32 262 1.5E-13 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DB29_02881 fbd30ecbb0bd246a5c46b03f5685469a 319 TIGRFAM TIGR01728 SsuA_fam: ABC transporter, substrate-binding protein, aliphatic sulfonates family 33 312 8.2E-54 T 14-10-2018 IPR010067 Aliphatic sulfonates-binding protein GO:0016020|GO:0042626 DB29_00526 5c19945fd7f107aa5aa7ac8442bf38ca 579 SUPERFAMILY SSF55957 447 575 1.27E-16 T 14-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DB29_00526 5c19945fd7f107aa5aa7ac8442bf38ca 579 SUPERFAMILY SSF53738 208 321 2.71E-19 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DB29_00526 5c19945fd7f107aa5aa7ac8442bf38ca 579 SUPERFAMILY SSF53738 306 457 8.24E-34 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DB29_00526 5c19945fd7f107aa5aa7ac8442bf38ca 579 Gene3D G3DSA:3.30.310.50 482 571 2.6E-10 T 14-10-2018 DB29_00526 5c19945fd7f107aa5aa7ac8442bf38ca 579 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 326 453 1.2E-23 T 14-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DB29_00526 5c19945fd7f107aa5aa7ac8442bf38ca 579 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 140 149 - T 14-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DB29_00526 5c19945fd7f107aa5aa7ac8442bf38ca 579 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 43 181 2.3E-39 T 14-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DB29_00526 5c19945fd7f107aa5aa7ac8442bf38ca 579 Gene3D G3DSA:3.40.120.10 209 327 2.8E-22 T 14-10-2018 DB29_00526 5c19945fd7f107aa5aa7ac8442bf38ca 579 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 139 153 3.1E-7 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DB29_00526 5c19945fd7f107aa5aa7ac8442bf38ca 579 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 298 313 3.1E-7 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DB29_00526 5c19945fd7f107aa5aa7ac8442bf38ca 579 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 231 250 3.1E-7 T 14-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DB29_00526 5c19945fd7f107aa5aa7ac8442bf38ca 579 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 496 560 3.8E-11 T 14-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DB29_00526 5c19945fd7f107aa5aa7ac8442bf38ca 579 Gene3D G3DSA:3.40.120.10 34 188 3.7E-45 T 14-10-2018 DB29_00526 5c19945fd7f107aa5aa7ac8442bf38ca 579 SUPERFAMILY SSF53738 32 236 4.12E-43 T 14-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DB29_00526 5c19945fd7f107aa5aa7ac8442bf38ca 579 Gene3D G3DSA:3.40.120.10 328 454 3.6E-39 T 14-10-2018 DB29_00526 5c19945fd7f107aa5aa7ac8442bf38ca 579 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 210 318 3.0E-23 T 14-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 DB29_00098 c19e7b8f1c9433375a135b917acf97e3 295 TIGRFAM TIGR01475 ubiA_other: putative 4-hydroxybenzoate polyprenyltransferase 8 290 2.7E-95 T 14-10-2018 IPR006371 4-hydroxybenzoate polyprenyltransferase-related DB29_00098 c19e7b8f1c9433375a135b917acf97e3 295 Gene3D G3DSA:1.20.120.1780 173 295 8.9E-37 T 14-10-2018 DB29_00098 c19e7b8f1c9433375a135b917acf97e3 295 Gene3D G3DSA:1.10.357.140 15 172 3.9E-55 T 14-10-2018 DB29_00098 c19e7b8f1c9433375a135b917acf97e3 295 Pfam PF01040 UbiA prenyltransferase family 29 270 6.2E-54 T 14-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 DB29_03872 a2f68a4bde7bda165088c0c0b374e9b9 111 Pfam PF14036 YlaH-like protein 24 100 1.1E-25 T 14-10-2018 IPR025620 YlaH-like protein DB29_01382 066d10d499d543b9409748dced3040ae 598 SMART SM00495 549 594 8.9E-17 T 14-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 DB29_01382 066d10d499d543b9409748dced3040ae 598 Pfam PF00704 Glycosyl hydrolases family 18 40 431 5.9E-98 T 14-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 DB29_01382 066d10d499d543b9409748dced3040ae 598 SUPERFAMILY SSF54556 332 402 1.53E-20 T 14-10-2018 IPR029070 Chitinase insertion domain superfamily DB29_01382 066d10d499d543b9409748dced3040ae 598 SMART SM00636 39 431 4.9E-158 T 14-10-2018 IPR011583 Chitinase II GO:0008061 DB29_01382 066d10d499d543b9409748dced3040ae 598 SUPERFAMILY SSF51445 32 435 9.84E-107 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily DB29_01382 066d10d499d543b9409748dced3040ae 598 SMART SM00060 458 528 9.7E-15 T 14-10-2018 IPR003961 Fibronectin type III GO:0005515 DB29_01382 066d10d499d543b9409748dced3040ae 598 SUPERFAMILY SSF51055 546 597 7.59E-17 T 14-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 DB29_01382 066d10d499d543b9409748dced3040ae 598 Gene3D G3DSA:2.60.40.10 453 546 3.4E-18 T 14-10-2018 IPR013783 Immunoglobulin-like fold DB29_01382 066d10d499d543b9409748dced3040ae 598 Pfam PF02839 Carbohydrate binding domain 566 591 6.3E-6 T 14-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 DB29_01382 066d10d499d543b9409748dced3040ae 598 ProSitePatterns PS01095 Chitinases family 18 active site. 190 198 - T 14-10-2018 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 DB29_01382 066d10d499d543b9409748dced3040ae 598 Gene3D G3DSA:2.10.10.20 549 592 4.2E-18 T 14-10-2018 DB29_01382 066d10d499d543b9409748dced3040ae 598 Gene3D G3DSA:3.10.50.10 331 402 7.9E-165 T 14-10-2018 IPR029070 Chitinase insertion domain superfamily DB29_01382 066d10d499d543b9409748dced3040ae 598 Pfam PF00041 Fibronectin type III domain 460 526 1.0E-11 T 14-10-2018 IPR003961 Fibronectin type III GO:0005515 DB29_01382 066d10d499d543b9409748dced3040ae 598 Gene3D G3DSA:3.20.20.80 41 431 7.9E-165 T 14-10-2018 DB29_01382 066d10d499d543b9409748dced3040ae 598 SUPERFAMILY SSF49265 454 540 5.13E-18 T 14-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 DB29_00232 bd574c4e4c2d77cfad03d844cf659fd8 283 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 5 270 24.098 T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 DB29_00232 bd574c4e4c2d77cfad03d844cf659fd8 283 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 166 268 9.3E-31 T 14-10-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 DB29_00232 bd574c4e4c2d77cfad03d844cf659fd8 283 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 7 103 1.1E-19 T 14-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal DB29_00232 bd574c4e4c2d77cfad03d844cf659fd8 283 PIRSF PIRSF000193 4 273 6.9E-77 T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 DB29_00232 bd574c4e4c2d77cfad03d844cf659fd8 283 Gene3D G3DSA:3.40.50.720 3 167 3.5E-47 T 14-10-2018 DB29_00232 bd574c4e4c2d77cfad03d844cf659fd8 283 Gene3D G3DSA:1.10.3730.10 168 274 8.6E-34 T 14-10-2018 DB29_00232 bd574c4e4c2d77cfad03d844cf659fd8 283 SUPERFAMILY SSF51735 6 164 1.34E-31 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_00232 bd574c4e4c2d77cfad03d844cf659fd8 283 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 7 268 3.0E-77 T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 DB29_00232 bd574c4e4c2d77cfad03d844cf659fd8 283 SUPERFAMILY SSF48179 165 271 4.59E-30 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 DB29_01896 88ce32d318dd41a7b8044742e146c879 220 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 209 1.3E-96 T 14-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 DB29_01896 88ce32d318dd41a7b8044742e146c879 220 ProSitePatterns PS00548 Ribosomal protein S3 signature. 163 197 - T 14-10-2018 IPR018280 Ribosomal protein S3, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB29_01896 88ce32d318dd41a7b8044742e146c879 220 Pfam PF00189 Ribosomal protein S3, C-terminal domain 120 202 3.3E-40 T 14-10-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB29_01896 88ce32d318dd41a7b8044742e146c879 220 Pfam PF07650 KH domain 39 109 9.7E-19 T 14-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB29_01896 88ce32d318dd41a7b8044742e146c879 220 SMART SM00322 60 125 6.2E-6 T 14-10-2018 IPR004087 K Homology domain GO:0003676 DB29_01896 88ce32d318dd41a7b8044742e146c879 220 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 38.58 T 14-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 DB29_01896 88ce32d318dd41a7b8044742e146c879 220 SUPERFAMILY SSF54814 2 106 4.71E-38 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 DB29_01896 88ce32d318dd41a7b8044742e146c879 220 SUPERFAMILY SSF54821 108 206 1.7E-38 T 14-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB29_01896 88ce32d318dd41a7b8044742e146c879 220 Gene3D G3DSA:3.30.300.20 17 107 8.4E-32 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta DB29_01896 88ce32d318dd41a7b8044742e146c879 220 Gene3D G3DSA:3.30.1140.32 108 208 3.5E-41 T 14-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB29_01832 0b7df51311c84c4e2b164ddf72fe6467 182 SUPERFAMILY SSF55729 9 178 2.96E-50 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase DB29_01832 0b7df51311c84c4e2b164ddf72fe6467 182 Gene3D G3DSA:3.40.630.30 4 179 1.9E-50 T 14-10-2018 DB29_01832 0b7df51311c84c4e2b164ddf72fe6467 182 Pfam PF13302 Acetyltransferase (GNAT) domain 14 154 7.0E-33 T 14-10-2018 IPR000182 GNAT domain DB29_00817 f90794bc0ce254ad031cb2213c55ccc0 371 PRINTS PR00344 Bacterial sensor protein C-terminal signature 312 322 4.9E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB29_00817 f90794bc0ce254ad031cb2213c55ccc0 371 PRINTS PR00344 Bacterial sensor protein C-terminal signature 329 347 4.9E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB29_00817 f90794bc0ce254ad031cb2213c55ccc0 371 PRINTS PR00344 Bacterial sensor protein C-terminal signature 352 365 4.9E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB29_00817 f90794bc0ce254ad031cb2213c55ccc0 371 PRINTS PR00344 Bacterial sensor protein C-terminal signature 294 308 4.9E-7 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB29_00817 f90794bc0ce254ad031cb2213c55ccc0 371 Pfam PF00512 His Kinase A (phospho-acceptor) domain 144 209 6.3E-13 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DB29_00817 f90794bc0ce254ad031cb2213c55ccc0 371 SUPERFAMILY SSF55874 200 366 7.2E-34 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB29_00817 f90794bc0ce254ad031cb2213c55ccc0 371 SMART SM00387 256 368 7.5E-28 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DB29_00817 f90794bc0ce254ad031cb2213c55ccc0 371 Gene3D G3DSA:1.10.287.130 88 207 1.3E-19 T 14-10-2018 DB29_00817 f90794bc0ce254ad031cb2213c55ccc0 371 Gene3D G3DSA:3.30.565.10 210 370 6.1E-32 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB29_00817 f90794bc0ce254ad031cb2213c55ccc0 371 SMART SM00388 144 211 1.4E-14 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DB29_00817 f90794bc0ce254ad031cb2213c55ccc0 371 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 256 367 8.6E-16 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DB29_00817 f90794bc0ce254ad031cb2213c55ccc0 371 SUPERFAMILY SSF47384 130 211 6.47E-16 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DB29_00977 7ce9a45eb4c670ee279c534d11ba4342 670 TIGRFAM TIGR00831 a_cpa1: Na+/H+ antiporter 18 460 1.4E-92 T 14-10-2018 IPR004705 Cation/H+ exchanger, CPA1 family, bacteria GO:0006812|GO:0015299|GO:0016021 DB29_00977 7ce9a45eb4c670ee279c534d11ba4342 670 Pfam PF00999 Sodium/hydrogen exchanger family 3 406 7.6E-63 T 14-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 DB29_01618 06f2c9648d68945e1d9bb98a77c33726 489 Pfam PF00474 Sodium:solute symporter family 1 394 1.0E-41 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 DB29_01618 06f2c9648d68945e1d9bb98a77c33726 489 Gene3D G3DSA:1.20.1730.10 1 487 4.3E-100 T 14-10-2018 IPR038377 Sodium/glucose symporter superfamily DB29_01618 06f2c9648d68945e1d9bb98a77c33726 489 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 1 399 4.4E-69 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 DB29_00075 25608956d3f999efbe7e79b712d3affc 258 Pfam PF00032 Cytochrome b(C-terminal)/b6/petD 81 159 1.5E-11 T 14-10-2018 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 DB29_00075 25608956d3f999efbe7e79b712d3affc 258 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 181 250 6.9E-14 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DB29_00075 25608956d3f999efbe7e79b712d3affc 258 SUPERFAMILY SSF46626 136 253 1.48E-14 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DB29_00075 25608956d3f999efbe7e79b712d3affc 258 Gene3D G3DSA:1.20.810.10 13 171 3.6E-25 T 14-10-2018 IPR027387 Cytochrome b/b6-like domain superfamily Reactome: R-HSA-611105 DB29_00075 25608956d3f999efbe7e79b712d3affc 258 Gene3D G3DSA:1.10.760.10 183 253 2.0E-15 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DB29_00075 25608956d3f999efbe7e79b712d3affc 258 PIRSF PIRSF036636 1 256 1.8E-134 T 14-10-2018 IPR012049 Menaquinone:cytochrome c reductase, cytochrome b/c subunit GO:0005506|GO:0009055|GO:0016021|GO:0020037 DB29_00075 25608956d3f999efbe7e79b712d3affc 258 SUPERFAMILY SSF81648 22 161 1.44E-30 T 14-10-2018 IPR036150 Cytochrome b/b6, C-terminal domain superfamily GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 DB29_00749 43bd1868faa650a01812c046db9e2e88 176 Pfam PF13302 Acetyltransferase (GNAT) domain 7 141 7.2E-28 T 14-10-2018 IPR000182 GNAT domain DB29_00749 43bd1868faa650a01812c046db9e2e88 176 SUPERFAMILY SSF55729 1 167 4.43E-45 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase DB29_00749 43bd1868faa650a01812c046db9e2e88 176 Gene3D G3DSA:3.40.630.30 2 169 3.3E-49 T 14-10-2018 DB29_02904 15e86b6e0d05606a65344840ed517ea8 221 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 12 218 4.3E-62 T 14-10-2018 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 DB29_02904 15e86b6e0d05606a65344840ed517ea8 221 SUPERFAMILY SSF161098 5 217 4.97E-47 T 14-10-2018 IPR035906 MetI-like superfamily DB29_02904 15e86b6e0d05606a65344840ed517ea8 221 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 28 212 2.8E-22 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DB29_02904 15e86b6e0d05606a65344840ed517ea8 221 Gene3D G3DSA:1.10.3720.10 1 221 1.9E-51 T 14-10-2018 IPR035906 MetI-like superfamily DB29_04280 3fdc25e297f76c61fbfa61096f1cecfe 441 Pfam PF02056 Family 4 glycosyl hydrolase 6 186 1.6E-52 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 DB29_04280 3fdc25e297f76c61fbfa61096f1cecfe 441 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 196 416 9.0E-46 T 14-10-2018 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 DB29_04280 3fdc25e297f76c61fbfa61096f1cecfe 441 SUPERFAMILY SSF56327 170 441 1.4E-82 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 DB29_04280 3fdc25e297f76c61fbfa61096f1cecfe 441 PRINTS PR00732 Glycosyl hydrolase family 4 signature 75 91 7.9E-41 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 DB29_04280 3fdc25e297f76c61fbfa61096f1cecfe 441 PRINTS PR00732 Glycosyl hydrolase family 4 signature 5 20 7.9E-41 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 DB29_04280 3fdc25e297f76c61fbfa61096f1cecfe 441 PRINTS PR00732 Glycosyl hydrolase family 4 signature 110 130 7.9E-41 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 DB29_04280 3fdc25e297f76c61fbfa61096f1cecfe 441 PRINTS PR00732 Glycosyl hydrolase family 4 signature 96 109 7.9E-41 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 DB29_04280 3fdc25e297f76c61fbfa61096f1cecfe 441 PRINTS PR00732 Glycosyl hydrolase family 4 signature 192 204 7.9E-41 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 DB29_04280 3fdc25e297f76c61fbfa61096f1cecfe 441 PRINTS PR00732 Glycosyl hydrolase family 4 signature 139 156 7.9E-41 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 DB29_04280 3fdc25e297f76c61fbfa61096f1cecfe 441 Gene3D G3DSA:3.40.50.720 1 167 7.0E-58 T 14-10-2018 DB29_04280 3fdc25e297f76c61fbfa61096f1cecfe 441 SUPERFAMILY SSF51735 3 164 3.01E-51 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_04280 3fdc25e297f76c61fbfa61096f1cecfe 441 Gene3D G3DSA:3.90.110.10 169 441 9.5E-89 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 DB29_04280 3fdc25e297f76c61fbfa61096f1cecfe 441 ProSitePatterns PS01324 Glycosyl hydrolases family 4 signature. 139 171 - T 14-10-2018 IPR019802 Glycoside hydrolase, family 4, conserved site GO:0004553|GO:0005975 DB29_02883 5dfa4a25dfced0b41cffcde598ef55a7 460 SUPERFAMILY SSF51735 215 459 3.4E-77 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_02883 5dfa4a25dfced0b41cffcde598ef55a7 460 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 69 197 1.6E-52 T 14-10-2018 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 DB29_02883 5dfa4a25dfced0b41cffcde598ef55a7 460 Gene3D G3DSA:1.10.285.10 18 394 2.6E-170 T 14-10-2018 DB29_02883 5dfa4a25dfced0b41cffcde598ef55a7 460 Gene3D G3DSA:1.10.285.10 395 460 6.1E-10 T 14-10-2018 DB29_02883 5dfa4a25dfced0b41cffcde598ef55a7 460 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 215 458 6.3E-93 T 14-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 DB29_02883 5dfa4a25dfced0b41cffcde598ef55a7 460 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 126 140 3.4E-29 T 14-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 DB29_02883 5dfa4a25dfced0b41cffcde598ef55a7 460 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 384 395 3.4E-29 T 14-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 DB29_02883 5dfa4a25dfced0b41cffcde598ef55a7 460 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 248 268 3.4E-29 T 14-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 DB29_02883 5dfa4a25dfced0b41cffcde598ef55a7 460 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 206 228 3.4E-29 T 14-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 DB29_02883 5dfa4a25dfced0b41cffcde598ef55a7 460 Gene3D G3DSA:3.40.50.10860 67 202 2.6E-170 T 14-10-2018 DB29_02883 5dfa4a25dfced0b41cffcde598ef55a7 460 SUPERFAMILY SSF53223 18 209 2.33E-77 T 14-10-2018 DB29_02883 5dfa4a25dfced0b41cffcde598ef55a7 460 Gene3D G3DSA:3.40.50.720 222 385 2.6E-170 T 14-10-2018 DB29_02883 5dfa4a25dfced0b41cffcde598ef55a7 460 PIRSF PIRSF000185 30 460 7.4E-127 T 14-10-2018 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 DB29_02883 5dfa4a25dfced0b41cffcde598ef55a7 460 SMART SM00839 217 458 1.6E-91 T 14-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 DB29_03029 5a2f079e35217de2ef918c2fa48ad31f 371 Gene3D G3DSA:1.10.10.2840 238 358 1.4E-20 T 14-10-2018 DB29_03029 5a2f079e35217de2ef918c2fa48ad31f 371 Pfam PF13556 PucR C-terminal helix-turn-helix domain 297 352 1.2E-17 T 14-10-2018 IPR025736 PucR C-terminal helix-turn-helix domain DB29_03029 5a2f079e35217de2ef918c2fa48ad31f 371 Pfam PF05651 Putative sugar diacid recognition 2 135 4.8E-48 T 14-10-2018 IPR008599 Putative sugar diacid recognition DB29_01961 c62a071190b13100e7cee65669624be9 220 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 81 183 2.2E-17 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DB29_01961 c62a071190b13100e7cee65669624be9 220 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 97 110 2.0E-9 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DB29_01961 c62a071190b13100e7cee65669624be9 220 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 1 12 2.0E-9 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DB29_01961 c62a071190b13100e7cee65669624be9 220 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 128 144 2.0E-9 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DB29_01961 c62a071190b13100e7cee65669624be9 220 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 146 166 2.0E-9 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DB29_01961 c62a071190b13100e7cee65669624be9 220 Gene3D G3DSA:3.40.50.1000 5 184 3.7E-61 T 14-10-2018 IPR023214 HAD superfamily DB29_01961 c62a071190b13100e7cee65669624be9 220 SUPERFAMILY SSF56784 1 208 1.07E-53 T 14-10-2018 IPR036412 HAD-like superfamily DB29_01961 c62a071190b13100e7cee65669624be9 220 Pfam PF13419 Haloacid dehalogenase-like hydrolase 5 183 8.1E-41 T 14-10-2018 DB29_01961 c62a071190b13100e7cee65669624be9 220 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 88 177 6.5E-7 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DB29_01961 c62a071190b13100e7cee65669624be9 220 Gene3D G3DSA:1.10.150.240 15 80 3.7E-61 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 DB29_03819 be0f7057534c0aa73117f9a8b3f673d0 327 Pfam PF02780 Transketolase, C-terminal domain 194 317 7.6E-40 T 14-10-2018 IPR033248 Transketolase, C-terminal domain DB29_03819 be0f7057534c0aa73117f9a8b3f673d0 327 Gene3D G3DSA:3.40.50.970 1 192 1.7E-92 T 14-10-2018 DB29_03819 be0f7057534c0aa73117f9a8b3f673d0 327 SUPERFAMILY SSF52922 188 325 1.7E-39 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 DB29_03819 be0f7057534c0aa73117f9a8b3f673d0 327 SUPERFAMILY SSF52518 2 204 5.89E-75 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold DB29_03819 be0f7057534c0aa73117f9a8b3f673d0 327 Gene3D G3DSA:3.40.50.920 193 327 2.3E-41 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 DB29_03819 be0f7057534c0aa73117f9a8b3f673d0 327 SMART SM00861 4 179 6.5E-73 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain DB29_03819 be0f7057534c0aa73117f9a8b3f673d0 327 Pfam PF02779 Transketolase, pyrimidine binding domain 4 178 1.1E-52 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain DB29_02893 f0c122346697593ba28afaccd0b928dc 40 SUPERFAMILY SSF161098 2 40 3.66E-6 T 14-10-2018 IPR035906 MetI-like superfamily DB29_00247 a907c2736a9d5eda71f8d401254a445b 370 Gene3D G3DSA:3.30.70.360 175 286 1.0E-127 T 14-10-2018 DB29_00247 a907c2736a9d5eda71f8d401254a445b 370 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 70 79 - T 14-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 DB29_00247 a907c2736a9d5eda71f8d401254a445b 370 Pfam PF07687 Peptidase dimerisation domain 183 272 1.0E-14 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain DB29_00247 a907c2736a9d5eda71f8d401254a445b 370 Gene3D G3DSA:3.40.630.10 12 361 1.0E-127 T 14-10-2018 DB29_00247 a907c2736a9d5eda71f8d401254a445b 370 SUPERFAMILY SSF53187 3 367 2.77E-65 T 14-10-2018 DB29_00247 a907c2736a9d5eda71f8d401254a445b 370 TIGRFAM TIGR01883 PepT-like: peptidase T-like protein 4 365 1.5E-142 T 14-10-2018 IPR010162 Peptidase M20B, peptidase T-like DB29_00247 a907c2736a9d5eda71f8d401254a445b 370 SUPERFAMILY SSF55031 181 286 8.9E-19 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain DB29_00247 a907c2736a9d5eda71f8d401254a445b 370 Pfam PF01546 Peptidase family M20/M25/M40 72 365 9.6E-23 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 DB29_00247 a907c2736a9d5eda71f8d401254a445b 370 PIRSF PIRSF001123 293 370 8.7E-6 T 14-10-2018 IPR008007 Peptidase M42 DB29_00247 a907c2736a9d5eda71f8d401254a445b 370 PIRSF PIRSF001123 99 178 1.9E-5 T 14-10-2018 IPR008007 Peptidase M42 DB29_00247 a907c2736a9d5eda71f8d401254a445b 370 PIRSF PIRSF001123 3 98 0.031 T 14-10-2018 IPR008007 Peptidase M42 DB29_00247 a907c2736a9d5eda71f8d401254a445b 370 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 103 141 - T 14-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 DB29_04039 f31313261f9f8d220e00ec3e477f4bb8 257 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 28 256 39.57 T 14-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 DB29_04039 f31313261f9f8d220e00ec3e477f4bb8 257 SUPERFAMILY SSF64005 23 250 1.26E-88 T 14-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 DB29_04039 f31313261f9f8d220e00ec3e477f4bb8 257 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 201 218 - T 14-10-2018 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199|Reactome: R-HSA-4755609 DB29_04039 f31313261f9f8d220e00ec3e477f4bb8 257 Gene3D G3DSA:3.40.1180.10 11 257 1.3E-97 T 14-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 DB29_04039 f31313261f9f8d220e00ec3e477f4bb8 257 Pfam PF01255 Putative undecaprenyl diphosphate synthase 35 255 1.5E-81 T 14-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 DB29_04039 f31313261f9f8d220e00ec3e477f4bb8 257 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 28 255 9.4E-86 T 14-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 DB29_04307 13c5daff8cdaa59807903a0e884e022f 150 SUPERFAMILY SSF143422 4 129 2.62E-45 T 14-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 DB29_04307 13c5daff8cdaa59807903a0e884e022f 150 Pfam PF01797 Transposase IS200 like 11 128 2.6E-38 T 14-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 DB29_04307 13c5daff8cdaa59807903a0e884e022f 150 SMART SM01321 10 128 3.5E-39 T 14-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 DB29_04307 13c5daff8cdaa59807903a0e884e022f 150 Gene3D G3DSA:3.30.70.1290 1 135 9.3E-43 T 14-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 DB29_02540 13c5daff8cdaa59807903a0e884e022f 150 SUPERFAMILY SSF143422 4 129 2.62E-45 T 14-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 DB29_02540 13c5daff8cdaa59807903a0e884e022f 150 Pfam PF01797 Transposase IS200 like 11 128 2.6E-38 T 14-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 DB29_02540 13c5daff8cdaa59807903a0e884e022f 150 SMART SM01321 10 128 3.5E-39 T 14-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 DB29_02540 13c5daff8cdaa59807903a0e884e022f 150 Gene3D G3DSA:3.30.70.1290 1 135 9.3E-43 T 14-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 DB29_00390 13c5daff8cdaa59807903a0e884e022f 150 SUPERFAMILY SSF143422 4 129 2.62E-45 T 14-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 DB29_00390 13c5daff8cdaa59807903a0e884e022f 150 Pfam PF01797 Transposase IS200 like 11 128 2.6E-38 T 14-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 DB29_00390 13c5daff8cdaa59807903a0e884e022f 150 SMART SM01321 10 128 3.5E-39 T 14-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 DB29_00390 13c5daff8cdaa59807903a0e884e022f 150 Gene3D G3DSA:3.30.70.1290 1 135 9.3E-43 T 14-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 DB29_03386 13c5daff8cdaa59807903a0e884e022f 150 SUPERFAMILY SSF143422 4 129 2.62E-45 T 14-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 DB29_03386 13c5daff8cdaa59807903a0e884e022f 150 Pfam PF01797 Transposase IS200 like 11 128 2.6E-38 T 14-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 DB29_03386 13c5daff8cdaa59807903a0e884e022f 150 SMART SM01321 10 128 3.5E-39 T 14-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 DB29_03386 13c5daff8cdaa59807903a0e884e022f 150 Gene3D G3DSA:3.30.70.1290 1 135 9.3E-43 T 14-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 DB29_03415 13c5daff8cdaa59807903a0e884e022f 150 SUPERFAMILY SSF143422 4 129 2.62E-45 T 14-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 DB29_03415 13c5daff8cdaa59807903a0e884e022f 150 Pfam PF01797 Transposase IS200 like 11 128 2.6E-38 T 14-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 DB29_03415 13c5daff8cdaa59807903a0e884e022f 150 SMART SM01321 10 128 3.5E-39 T 14-10-2018 IPR002686 Transposase IS200-like GO:0003677|GO:0004803|GO:0006313 DB29_03415 13c5daff8cdaa59807903a0e884e022f 150 Gene3D G3DSA:3.30.70.1290 1 135 9.3E-43 T 14-10-2018 IPR036515 Transposase IS200-like superfamily GO:0003677|GO:0004803|GO:0006313 DB29_01547 c539c439db1ccd6be2ae878867485297 184 Gene3D G3DSA:3.10.450.40 32 102 8.6E-15 T 14-10-2018 DB29_01547 c539c439db1ccd6be2ae878867485297 184 Gene3D G3DSA:3.10.450.40 117 184 8.2E-19 T 14-10-2018 DB29_01547 c539c439db1ccd6be2ae878867485297 184 Pfam PF03413 Peptidase propeptide and YPEB domain 42 96 5.1E-8 T 14-10-2018 IPR025711 PepSY domain DB29_01547 c539c439db1ccd6be2ae878867485297 184 Pfam PF03413 Peptidase propeptide and YPEB domain 123 181 2.9E-12 T 14-10-2018 IPR025711 PepSY domain DB29_03411 ec83bee65accf65c0c9dafaf24625cc8 317 Pfam PF01032 FecCD transport family 9 311 1.4E-69 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 DB29_03411 ec83bee65accf65c0c9dafaf24625cc8 317 Gene3D G3DSA:1.10.3470.10 1 316 1.1E-67 T 14-10-2018 IPR037294 ABC transporter, BtuC-like DB29_03411 ec83bee65accf65c0c9dafaf24625cc8 317 SUPERFAMILY SSF81345 3 312 5.23E-72 T 14-10-2018 IPR037294 ABC transporter, BtuC-like DB29_02467 38f97f52f23cfe369f3c5393fa3a87ed 413 Gene3D G3DSA:3.90.1150.10 8 384 3.6E-142 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DB29_02467 38f97f52f23cfe369f3c5393fa3a87ed 413 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 186 206 - T 14-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site DB29_02467 38f97f52f23cfe369f3c5393fa3a87ed 413 Gene3D G3DSA:3.40.640.10 20 282 3.6E-142 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DB29_02467 38f97f52f23cfe369f3c5393fa3a87ed 413 SUPERFAMILY SSF53383 10 387 3.17E-95 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DB29_02467 38f97f52f23cfe369f3c5393fa3a87ed 413 PIRSF PIRSF000524 3 410 8.5E-131 T 14-10-2018 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase KEGG: 00440+2.6.1.37|MetaCyc: PWY-6832|Reactome: R-HSA-389661|Reactome: R-HSA-9033241 DB29_02467 38f97f52f23cfe369f3c5393fa3a87ed 413 Pfam PF00266 Aminotransferase class-V 34 356 3.7E-32 T 14-10-2018 IPR000192 Aminotransferase class V domain DB29_01208 f2a9078180a02049b2c7e06f9810562c 322 Pfam PF01261 Xylose isomerase-like TIM barrel 20 262 5.7E-31 T 14-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain DB29_01208 f2a9078180a02049b2c7e06f9810562c 322 Pfam PF07582 AP endonuclease family 2 C terminus 269 321 1.2E-21 T 14-10-2018 IPR011418 AP endonuclease, family 2, C-terminal DB29_01208 f2a9078180a02049b2c7e06f9810562c 322 SUPERFAMILY SSF51658 2 311 8.9E-53 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily DB29_01208 f2a9078180a02049b2c7e06f9810562c 322 Gene3D G3DSA:3.20.20.150 1 316 1.3E-71 T 14-10-2018 DB29_01351 444135812d431f89bf08bb57a02f3b4c 115 Gene3D G3DSA:1.10.1790.10 13 111 1.0E-9 T 14-10-2018 DB29_01351 444135812d431f89bf08bb57a02f3b4c 115 Pfam PF00874 PRD domain 38 109 3.8E-9 T 14-10-2018 IPR011608 PRD domain GO:0006355 DB29_01351 444135812d431f89bf08bb57a02f3b4c 115 SUPERFAMILY SSF63520 29 110 5.36E-12 T 14-10-2018 IPR036634 PRD domain superfamily GO:0006355 DB29_03542 2c754b9498e19e41572ee5320d2c4681 276 SMART SM01232 134 226 6.8E-46 T 14-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 DB29_03542 2c754b9498e19e41572ee5320d2c4681 276 SUPERFAMILY SSF46946 134 223 8.9E-30 T 14-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 DB29_03542 2c754b9498e19e41572ee5320d2c4681 276 Gene3D G3DSA:3.20.190.10 2 129 9.1E-41 T 14-10-2018 IPR035937 MutM-like, N-terminal DB29_03542 2c754b9498e19e41572ee5320d2c4681 276 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 274 44.107 T 14-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 DB29_03542 2c754b9498e19e41572ee5320d2c4681 276 Gene3D G3DSA:1.10.8.50 136 275 1.7E-50 T 14-10-2018 DB29_03542 2c754b9498e19e41572ee5320d2c4681 276 Pfam PF06827 Zinc finger found in FPG and IleRS 247 275 9.8E-10 T 14-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 DB29_03542 2c754b9498e19e41572ee5320d2c4681 276 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 134 223 3.5E-33 T 14-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 DB29_03542 2c754b9498e19e41572ee5320d2c4681 276 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 273 2.4E-115 T 14-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 DB29_03542 2c754b9498e19e41572ee5320d2c4681 276 SMART SM00898 2 118 9.2E-52 T 14-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 DB29_03542 2c754b9498e19e41572ee5320d2c4681 276 SUPERFAMILY SSF81624 2 139 1.7E-42 T 14-10-2018 IPR035937 MutM-like, N-terminal DB29_03542 2c754b9498e19e41572ee5320d2c4681 276 SUPERFAMILY SSF57716 222 274 7.26E-18 T 14-10-2018 DB29_03542 2c754b9498e19e41572ee5320d2c4681 276 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 117 3.8E-34 T 14-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 DB29_01228 f57e341ce8123c1834f2a347ade11be4 273 PIRSF PIRSF015853 1 270 2.2E-109 T 14-10-2018 IPR007035 Peptidase M55, D-aminopeptidase DB29_01228 f57e341ce8123c1834f2a347ade11be4 273 SUPERFAMILY SSF63992 1 273 8.89E-101 T 14-10-2018 IPR036177 Peptidase M55, D-aminopeptidase superfamily DB29_01228 f57e341ce8123c1834f2a347ade11be4 273 Pfam PF04951 D-aminopeptidase 1 261 7.9E-94 T 14-10-2018 IPR007035 Peptidase M55, D-aminopeptidase DB29_01228 f57e341ce8123c1834f2a347ade11be4 273 Gene3D G3DSA:3.40.50.10780 1 210 6.7E-73 T 14-10-2018 IPR027476 D-aminopeptidase, N-terminal DB29_01228 f57e341ce8123c1834f2a347ade11be4 273 Gene3D G3DSA:3.30.1360.130 211 273 4.3E-26 T 14-10-2018 DB29_00071 0565bb0bd110bee0e9739e4c694a660b 406 SUPERFAMILY SSF103473 5 392 4.19E-59 T 14-10-2018 IPR036259 MFS transporter superfamily DB29_00071 0565bb0bd110bee0e9739e4c694a660b 406 Pfam PF07690 Major Facilitator Superfamily 19 363 1.6E-38 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DB29_00071 0565bb0bd110bee0e9739e4c694a660b 406 Gene3D G3DSA:1.20.1720.10 13 392 7.0E-95 T 14-10-2018 DB29_00071 0565bb0bd110bee0e9739e4c694a660b 406 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 10 391 1.7E-111 T 14-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 DB29_04049 9aff94ef25a7d5c978e50a6eb8004f69 761 Gene3D G3DSA:3.40.50.10050 556 663 5.6E-38 T 14-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily DB29_04049 9aff94ef25a7d5c978e50a6eb8004f69 761 ProSitePatterns PS01176 Initiation factor 2 signature. 713 735 - T 14-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 DB29_04049 9aff94ef25a7d5c978e50a6eb8004f69 761 SUPERFAMILY SSF52540 255 434 4.28E-54 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_04049 9aff94ef25a7d5c978e50a6eb8004f69 761 Pfam PF00009 Elongation factor Tu GTP binding domain 267 423 3.9E-35 T 14-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 DB29_04049 9aff94ef25a7d5c978e50a6eb8004f69 761 Gene3D G3DSA:3.40.50.300 259 433 1.1E-74 T 14-10-2018 DB29_04049 9aff94ef25a7d5c978e50a6eb8004f69 761 SUPERFAMILY SSF50447 663 760 1.62E-33 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily DB29_04049 9aff94ef25a7d5c978e50a6eb8004f69 761 Gene3D G3DSA:2.40.30.10 434 550 1.5E-38 T 14-10-2018 DB29_04049 9aff94ef25a7d5c978e50a6eb8004f69 761 Gene3D G3DSA:1.10.10.2480 1 72 5.9E-15 T 14-10-2018 DB29_04049 9aff94ef25a7d5c978e50a6eb8004f69 761 SUPERFAMILY SSF50447 435 516 1.44E-24 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily DB29_04049 9aff94ef25a7d5c978e50a6eb8004f69 761 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 264 421 2.9E-39 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 DB29_04049 9aff94ef25a7d5c978e50a6eb8004f69 761 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 760 17.57 T 14-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 DB29_04049 9aff94ef25a7d5c978e50a6eb8004f69 761 Pfam PF11987 Translation-initiation factor 2 548 652 6.1E-37 T 14-10-2018 IPR023115 Translation initiation factor IF- 2, domain 3 DB29_04049 9aff94ef25a7d5c978e50a6eb8004f69 761 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 178 760 4.0E-276 T 14-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 DB29_04049 9aff94ef25a7d5c978e50a6eb8004f69 761 Gene3D G3DSA:2.40.30.10 664 761 2.7E-35 T 14-10-2018 DB29_04049 9aff94ef25a7d5c978e50a6eb8004f69 761 SUPERFAMILY SSF52156 542 669 1.57E-38 T 14-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily DB29_04049 9aff94ef25a7d5c978e50a6eb8004f69 761 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 1 48 7.1E-14 T 14-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal DB29_04049 9aff94ef25a7d5c978e50a6eb8004f69 761 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 189 236 1.2E-12 T 14-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal DB29_01210 d0952ac63757fbece628d0578a3b2517 283 SUPERFAMILY SSF50346 101 281 6.08E-37 T 14-10-2018 IPR011033 PRC-barrel-like superfamily DB29_01210 d0952ac63757fbece628d0578a3b2517 283 Gene3D G3DSA:2.30.30.240 154 247 5.4E-12 T 14-10-2018 DB29_01210 d0952ac63757fbece628d0578a3b2517 283 Pfam PF05239 PRC-barrel domain 178 242 4.1E-5 T 14-10-2018 IPR027275 PRC-barrel domain DB29_01210 d0952ac63757fbece628d0578a3b2517 283 SUPERFAMILY SSF50346 4 111 1.92E-23 T 14-10-2018 IPR011033 PRC-barrel-like superfamily DB29_01210 d0952ac63757fbece628d0578a3b2517 283 Gene3D G3DSA:3.90.50.10 8 113 8.2E-12 T 14-10-2018 IPR014747 Bacterial photosynthetic reaction centre, H-chain, C-terminal GO:0019684|GO:0030077|GO:0045156 DB29_04169 fcbf3faf938582cfd4b90d5e16bc6bd4 715 Gene3D G3DSA:2.70.20.10 219 477 2.6E-121 T 14-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 DB29_04169 fcbf3faf938582cfd4b90d5e16bc6bd4 715 Pfam PF01131 DNA topoisomerase 161 582 6.0E-98 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 DB29_04169 fcbf3faf938582cfd4b90d5e16bc6bd4 715 Gene3D G3DSA:1.10.290.10 283 406 2.6E-121 T 14-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 DB29_04169 fcbf3faf938582cfd4b90d5e16bc6bd4 715 Gene3D G3DSA:1.10.460.10 166 591 2.6E-121 T 14-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 DB29_04169 fcbf3faf938582cfd4b90d5e16bc6bd4 715 SMART SM00437 274 546 7.4E-52 T 14-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 DB29_04169 fcbf3faf938582cfd4b90d5e16bc6bd4 715 SUPERFAMILY SSF56712 3 596 7.06E-151 T 14-10-2018 IPR023405 DNA topoisomerase, type IA, core domain DB29_04169 fcbf3faf938582cfd4b90d5e16bc6bd4 715 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 312 326 - T 14-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 DB29_04169 fcbf3faf938582cfd4b90d5e16bc6bd4 715 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 195 213 2.1E-19 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 DB29_04169 fcbf3faf938582cfd4b90d5e16bc6bd4 715 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 392 408 2.1E-19 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 DB29_04169 fcbf3faf938582cfd4b90d5e16bc6bd4 715 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 105 118 2.1E-19 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 DB29_04169 fcbf3faf938582cfd4b90d5e16bc6bd4 715 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 317 326 2.1E-19 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 DB29_04169 fcbf3faf938582cfd4b90d5e16bc6bd4 715 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 509 523 2.1E-19 T 14-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 DB29_04169 fcbf3faf938582cfd4b90d5e16bc6bd4 715 Pfam PF01751 Toprim domain 3 139 1.2E-13 T 14-10-2018 IPR006171 TOPRIM domain DB29_04169 fcbf3faf938582cfd4b90d5e16bc6bd4 715 SMART SM00436 131 225 1.2E-20 T 14-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 DB29_04169 fcbf3faf938582cfd4b90d5e16bc6bd4 715 Gene3D G3DSA:3.40.50.140 1 159 9.0E-47 T 14-10-2018 DB29_04169 fcbf3faf938582cfd4b90d5e16bc6bd4 715 SMART SM00493 1 131 1.4E-14 T 14-10-2018 IPR006171 TOPRIM domain DB29_03537 84b997532791e18e6989a4e5950fed31 314 SUPERFAMILY SSF51735 7 147 5.29E-47 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_03537 84b997532791e18e6989a4e5950fed31 314 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 7 147 1.3E-41 T 14-10-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 DB29_03537 84b997532791e18e6989a4e5950fed31 314 TIGRFAM TIGR01763 MalateDH_bact: malate dehydrogenase, NAD-dependent 5 310 1.3E-156 T 14-10-2018 IPR011275 Malate dehydrogenase, type 3 GO:0016616|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 DB29_03537 84b997532791e18e6989a4e5950fed31 314 PRINTS PR00086 L-lactate dehydrogenase signature 33 57 1.1E-28 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 DB29_03537 84b997532791e18e6989a4e5950fed31 314 PRINTS PR00086 L-lactate dehydrogenase signature 175 188 1.1E-28 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 DB29_03537 84b997532791e18e6989a4e5950fed31 314 PRINTS PR00086 L-lactate dehydrogenase signature 7 31 1.1E-28 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 DB29_03537 84b997532791e18e6989a4e5950fed31 314 PRINTS PR00086 L-lactate dehydrogenase signature 121 141 1.1E-28 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 DB29_03537 84b997532791e18e6989a4e5950fed31 314 PRINTS PR00086 L-lactate dehydrogenase signature 145 163 1.1E-28 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 DB29_03537 84b997532791e18e6989a4e5950fed31 314 SUPERFAMILY SSF56327 150 310 5.48E-53 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 DB29_03537 84b997532791e18e6989a4e5950fed31 314 Gene3D G3DSA:3.40.50.720 1 149 3.8E-58 T 14-10-2018 DB29_03537 84b997532791e18e6989a4e5950fed31 314 PIRSF PIRSF000102 2 313 5.4E-105 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 DB29_03537 84b997532791e18e6989a4e5950fed31 314 Hamap MF_00487 Malate dehydrogenase [mdh]. 6 312 46.993 T 14-10-2018 IPR011275 Malate dehydrogenase, type 3 GO:0016616|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 DB29_03537 84b997532791e18e6989a4e5950fed31 314 Gene3D G3DSA:3.90.110.10 150 312 8.1E-61 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 DB29_03537 84b997532791e18e6989a4e5950fed31 314 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 151 308 8.3E-28 T 14-10-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 DB29_01705 82aac4c62d93e75b2b6d8338ab7faaeb 149 Pfam PF02082 Transcriptional regulator 1 82 4.3E-25 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type DB29_01705 82aac4c62d93e75b2b6d8338ab7faaeb 149 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 132 2.9E-38 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type DB29_01705 82aac4c62d93e75b2b6d8338ab7faaeb 149 SUPERFAMILY SSF46785 2 133 1.54E-35 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_01705 82aac4c62d93e75b2b6d8338ab7faaeb 149 Gene3D G3DSA:1.10.10.10 1 143 1.2E-36 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_01705 82aac4c62d93e75b2b6d8338ab7faaeb 149 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 14-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site DB29_01254 cd20c4c7107833d143505d3698c6fcae 270 Gene3D G3DSA:3.20.20.140 4 270 4.2E-74 T 14-10-2018 DB29_01254 cd20c4c7107833d143505d3698c6fcae 270 TIGRFAM TIGR01856 hisJ_fam: histidinol phosphate phosphatase, HisJ family 5 246 4.8E-51 T 14-10-2018 IPR010140 Histidinol phosphate phosphatase, HisJ GO:0000105|GO:0004401 KEGG: 00340+3.1.3.15 DB29_01254 cd20c4c7107833d143505d3698c6fcae 270 SMART SM00481 5 93 0.0095 T 14-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal DB29_01254 cd20c4c7107833d143505d3698c6fcae 270 Pfam PF02811 PHP domain 6 199 1.5E-15 T 14-10-2018 IPR004013 PHP domain GO:0003824 DB29_01254 cd20c4c7107833d143505d3698c6fcae 270 SUPERFAMILY SSF89550 5 263 1.96E-53 T 14-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 DB29_00311 a0cb61098918833226998e4ff01fee92 234 SUPERFAMILY SSF53335 7 104 9.89E-13 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DB29_00311 a0cb61098918833226998e4ff01fee92 234 PIRSF PIRSF018637 4 234 1.0E-97 T 14-10-2018 IPR006901 tRNA methyltransferase TrmK GO:0016429 DB29_00311 a0cb61098918833226998e4ff01fee92 234 Pfam PF04816 tRNA (adenine(22)-N(1))-methyltransferase 23 229 3.6E-68 T 14-10-2018 IPR006901 tRNA methyltransferase TrmK GO:0016429 DB29_00311 a0cb61098918833226998e4ff01fee92 234 Gene3D G3DSA:3.40.50.150 1 165 7.4E-50 T 14-10-2018 DB29_02525 19981710e3ae7924a8a9df8f8bb6b0b1 69 SUPERFAMILY SSF52413 3 55 8.37E-9 T 14-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 DB29_02525 19981710e3ae7924a8a9df8f8bb6b0b1 69 Gene3D G3DSA:3.40.50.720 1 68 1.3E-15 T 14-10-2018 DB29_04024 30511e6f5042c1269cb38b25febfaf8c 89 Pfam PF01313 Bacterial export proteins, family 3 6 76 3.6E-29 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 DB29_04024 30511e6f5042c1269cb38b25febfaf8c 89 PIRSF PIRSF004669 1 89 2.6E-31 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 DB29_04024 30511e6f5042c1269cb38b25febfaf8c 89 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 1 87 1.2E-30 T 14-10-2018 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 DB29_04024 30511e6f5042c1269cb38b25febfaf8c 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 4.9E-22 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 DB29_04024 30511e6f5042c1269cb38b25febfaf8c 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 4.9E-22 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 DB29_04024 30511e6f5042c1269cb38b25febfaf8c 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 4.9E-22 T 14-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 DB29_00364 a860edec0a9e6e5bcc6440c0ba2e6d3c 285 Pfam PF13509 S1 domain 5 62 2.7E-17 T 14-10-2018 IPR039566 Conserved virulence factor B, S1 domain DB29_00364 a860edec0a9e6e5bcc6440c0ba2e6d3c 285 Gene3D G3DSA:1.10.10.10 220 281 9.4E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_00364 a860edec0a9e6e5bcc6440c0ba2e6d3c 285 Gene3D G3DSA:2.40.50.140 152 218 9.6E-13 T 14-10-2018 DB29_00364 a860edec0a9e6e5bcc6440c0ba2e6d3c 285 Gene3D G3DSA:2.40.50.140 72 148 1.3E-24 T 14-10-2018 DB29_00364 a860edec0a9e6e5bcc6440c0ba2e6d3c 285 PIRSF PIRSF012524 1 283 9.0E-94 T 14-10-2018 IPR014464 Conserved virulence factor B DB29_03955 60602ab22b1dc4adc1900d5d9077d9e7 796 SUPERFAMILY SSF52540 239 440 8.52E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_03955 60602ab22b1dc4adc1900d5d9077d9e7 796 SMART SM00490 557 654 5.5E-9 T 14-10-2018 IPR001650 Helicase, C-terminal DB29_03955 60602ab22b1dc4adc1900d5d9077d9e7 796 Gene3D G3DSA:1.10.8.630 1 113 7.3E-27 T 14-10-2018 DB29_03955 60602ab22b1dc4adc1900d5d9077d9e7 796 SUPERFAMILY SSF52540 524 699 8.36E-37 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_03955 60602ab22b1dc4adc1900d5d9077d9e7 796 TIGRFAM TIGR00595 priA: primosomal protein N' 283 792 1.7E-218 T 14-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 DB29_03955 60602ab22b1dc4adc1900d5d9077d9e7 796 Pfam PF04851 Type III restriction enzyme, res subunit 257 422 4.1E-17 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 DB29_03955 60602ab22b1dc4adc1900d5d9077d9e7 796 SMART SM00487 255 454 3.5E-27 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DB29_03955 60602ab22b1dc4adc1900d5d9077d9e7 796 Gene3D G3DSA:3.40.50.300 247 440 4.8E-76 T 14-10-2018 DB29_03955 60602ab22b1dc4adc1900d5d9077d9e7 796 Hamap MF_00983 Probable primosomal protein N' [priA]. 8 795 25.589 T 14-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 DB29_03955 60602ab22b1dc4adc1900d5d9077d9e7 796 Pfam PF00271 Helicase conserved C-terminal domain 558 652 2.1E-7 T 14-10-2018 IPR001650 Helicase, C-terminal DB29_00146 fb9ee84399f1cb3727b8a2868d17586a 459 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 276 283 5.8E-14 T 14-10-2018 DB29_00146 fb9ee84399f1cb3727b8a2868d17586a 459 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 2 24 5.8E-14 T 14-10-2018 DB29_00146 fb9ee84399f1cb3727b8a2868d17586a 459 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 236 250 5.8E-14 T 14-10-2018 DB29_00146 fb9ee84399f1cb3727b8a2868d17586a 459 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 149 174 5.8E-14 T 14-10-2018 DB29_00146 fb9ee84399f1cb3727b8a2868d17586a 459 Gene3D G3DSA:3.50.50.60 113 438 1.1E-142 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB29_00146 fb9ee84399f1cb3727b8a2868d17586a 459 SUPERFAMILY SSF55424 322 445 6.87E-33 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 DB29_00146 fb9ee84399f1cb3727b8a2868d17586a 459 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 3 22 6.1E-22 T 14-10-2018 DB29_00146 fb9ee84399f1cb3727b8a2868d17586a 459 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 235 251 6.1E-22 T 14-10-2018 DB29_00146 fb9ee84399f1cb3727b8a2868d17586a 459 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 261 283 6.1E-22 T 14-10-2018 DB29_00146 fb9ee84399f1cb3727b8a2868d17586a 459 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 104 122 6.1E-22 T 14-10-2018 DB29_00146 fb9ee84399f1cb3727b8a2868d17586a 459 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 149 167 6.1E-22 T 14-10-2018 DB29_00146 fb9ee84399f1cb3727b8a2868d17586a 459 SUPERFAMILY SSF51905 1 314 4.17E-43 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB29_00146 fb9ee84399f1cb3727b8a2868d17586a 459 Gene3D G3DSA:3.50.50.60 2 339 1.1E-142 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB29_00146 fb9ee84399f1cb3727b8a2868d17586a 459 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 331 430 2.8E-16 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 DB29_00146 fb9ee84399f1cb3727b8a2868d17586a 459 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 2 306 3.2E-60 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DB29_01238 3acd1848f17eb4222c9b29f2830e4fd6 413 Gene3D G3DSA:1.10.10.2840 259 391 4.2E-21 T 14-10-2018 DB29_01238 3acd1848f17eb4222c9b29f2830e4fd6 413 Pfam PF13556 PucR C-terminal helix-turn-helix domain 329 385 4.3E-21 T 14-10-2018 IPR025736 PucR C-terminal helix-turn-helix domain DB29_03898 414b4df5b6c6c1ccedf3162ca36f5223 260 SUPERFAMILY SSF52151 5 244 3.66E-54 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase DB29_03898 414b4df5b6c6c1ccedf3162ca36f5223 260 ProSitePatterns PS01237 Uncharacterized protein family UPF0028 signature. 13 45 - T 14-10-2018 IPR001423 Lysophospholipase patatin, conserved site GO:0004622|GO:0046470 Reactome: R-HSA-6814848 DB29_03898 414b4df5b6c6c1ccedf3162ca36f5223 260 Pfam PF01734 Patatin-like phospholipase 10 166 8.3E-23 T 14-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 DB29_03898 414b4df5b6c6c1ccedf3162ca36f5223 260 Gene3D G3DSA:3.40.1090.10 2 105 3.8E-26 T 14-10-2018 DB29_03898 414b4df5b6c6c1ccedf3162ca36f5223 260 Gene3D G3DSA:3.40.1090.20 123 178 4.1E-6 T 14-10-2018 DB29_02080 295e4242a2697e9630c573e175ca436b 656 Gene3D G3DSA:3.30.450.20 51 155 1.1E-28 T 14-10-2018 DB29_02080 295e4242a2697e9630c573e175ca436b 656 PIRSF PIRSF026583 1 655 1.8E-257 T 14-10-2018 IPR014528 Cyclic-di-AMP phosphodiesterase GdpP/PdeA DB29_02080 295e4242a2697e9630c573e175ca436b 656 Pfam PF01368 DHH family 338 495 1.0E-21 T 14-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 DB29_02080 295e4242a2697e9630c573e175ca436b 656 SUPERFAMILY SSF55073 156 297 8.37E-6 T 14-10-2018 IPR029787 Nucleotide cyclase DB29_02080 295e4242a2697e9630c573e175ca436b 656 Gene3D G3DSA:3.90.1640.10 321 540 1.4E-51 T 14-10-2018 DB29_02080 295e4242a2697e9630c573e175ca436b 656 SMART SM00267 129 298 3.2E-5 T 14-10-2018 IPR000160 GGDEF domain DB29_02080 295e4242a2697e9630c573e175ca436b 656 SUPERFAMILY SSF64182 337 637 7.59E-71 T 14-10-2018 IPR038763 DHH phosphoesterase superfamily DB29_02080 295e4242a2697e9630c573e175ca436b 656 Gene3D G3DSA:3.10.310.30 562 652 1.7E-7 T 14-10-2018 DB29_02080 295e4242a2697e9630c573e175ca436b 656 Pfam PF02272 DHHA1 domain 517 647 2.3E-15 T 14-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 DB29_02080 295e4242a2697e9630c573e175ca436b 656 Gene3D G3DSA:3.30.70.270 156 308 1.1E-6 T 14-10-2018 DB29_00814 d4f2c26d731fe1af21fdbb6efde160fa 316 PIRSF PIRSF036979 4 309 1.4E-52 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 DB29_00814 d4f2c26d731fe1af21fdbb6efde160fa 316 Gene3D G3DSA:3.40.800.10 2 314 4.7E-64 T 14-10-2018 DB29_00814 d4f2c26d731fe1af21fdbb6efde160fa 316 SUPERFAMILY SSF52768 4 309 2.34E-67 T 14-10-2018 IPR023696 Ureohydrolase domain superfamily DB29_00814 d4f2c26d731fe1af21fdbb6efde160fa 316 Pfam PF00491 Arginase family 27 302 1.5E-58 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 DB29_02795 eda875e9fd7af7b0aea8610fa99bb1d4 311 Gene3D G3DSA:1.10.3720.10 67 310 5.3E-72 T 14-10-2018 IPR035906 MetI-like superfamily DB29_02795 eda875e9fd7af7b0aea8610fa99bb1d4 311 SUPERFAMILY SSF161098 71 300 1.23E-63 T 14-10-2018 IPR035906 MetI-like superfamily DB29_02795 eda875e9fd7af7b0aea8610fa99bb1d4 311 SUPERFAMILY SSF160964 28 64 6.8E-5 T 14-10-2018 DB29_02795 eda875e9fd7af7b0aea8610fa99bb1d4 311 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 102 307 1.1E-22 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DB29_02447 94cfc9830d5743d41c1e7b190cef0750 290 Gene3D G3DSA:3.40.50.720 2 173 2.6E-30 T 14-10-2018 DB29_02447 94cfc9830d5743d41c1e7b190cef0750 290 Pfam PF09130 Domain of unknown function (DUF1932) 195 262 8.5E-14 T 14-10-2018 IPR015814 Phosphogluconate dehydrogenase, NAD-binding, putative, C-terminal DB29_02447 94cfc9830d5743d41c1e7b190cef0750 290 Gene3D G3DSA:1.10.1040.10 175 286 2.7E-26 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 DB29_02447 94cfc9830d5743d41c1e7b190cef0750 290 SUPERFAMILY SSF48179 167 268 8.84E-25 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 DB29_02447 94cfc9830d5743d41c1e7b190cef0750 290 SUPERFAMILY SSF51735 1 164 1.12E-22 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_02447 94cfc9830d5743d41c1e7b190cef0750 290 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 2 126 3.2E-8 T 14-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 DB29_00755 02df9bc5cc05faed707992ac25823040 357 SUPERFAMILY SSF50331 243 345 8.5E-7 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal DB29_00755 02df9bc5cc05faed707992ac25823040 357 SMART SM00382 27 214 3.7E-20 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_00755 02df9bc5cc05faed707992ac25823040 357 Pfam PF12857 TOBE-like domain 288 344 1.5E-13 T 14-10-2018 IPR024765 TOBE-like domain KEGG: 00920+3.6.3.25 DB29_00755 02df9bc5cc05faed707992ac25823040 357 Gene3D G3DSA:3.40.50.300 4 260 2.3E-80 T 14-10-2018 DB29_00755 02df9bc5cc05faed707992ac25823040 357 SUPERFAMILY SSF52540 3 240 6.55E-86 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_00755 02df9bc5cc05faed707992ac25823040 357 TIGRFAM TIGR00968 3a0106s01: sulfate ABC transporter, ATP-binding protein 3 239 2.5E-112 T 14-10-2018 IPR005666 Sulphate transport system permease protein 1 GO:0008272|GO:0015419|GO:0016020|GO:0043190 KEGG: 00920+3.6.3.25 DB29_00755 02df9bc5cc05faed707992ac25823040 357 Pfam PF00005 ABC transporter 18 164 2.2E-36 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB29_00755 02df9bc5cc05faed707992ac25823040 357 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB29_00108 8d83260075a8a5e79abfb3d04c7f82ab 205 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 6 202 6.0E-53 T 14-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 DB29_00108 8d83260075a8a5e79abfb3d04c7f82ab 205 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 7 201 20.09 T 14-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 DB29_00108 8d83260075a8a5e79abfb3d04c7f82ab 205 Pfam PF02660 Glycerol-3-phosphate acyltransferase 11 192 1.5E-52 T 14-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 DB29_00108 8d83260075a8a5e79abfb3d04c7f82ab 205 SMART SM01207 10 193 2.8E-78 T 14-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 DB29_02160 dd15b7f944a46f3c3876f1d95b7e645c 395 Gene3D G3DSA:3.30.1220.10 235 370 7.0E-7 T 14-10-2018 IPR036627 CobW-like, C-terminal domain superfamily DB29_02160 dd15b7f944a46f3c3876f1d95b7e645c 395 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 4 210 1.1E-56 T 14-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain DB29_02160 dd15b7f944a46f3c3876f1d95b7e645c 395 Gene3D G3DSA:3.40.50.300 1 228 1.5E-70 T 14-10-2018 DB29_02160 dd15b7f944a46f3c3876f1d95b7e645c 395 SMART SM00833 255 370 3.2E-48 T 14-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal DB29_02160 dd15b7f944a46f3c3876f1d95b7e645c 395 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 255 370 5.3E-26 T 14-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal DB29_02160 dd15b7f944a46f3c3876f1d95b7e645c 395 SUPERFAMILY SSF52540 3 299 7.83E-37 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_01298 764402d180bc37d478d0c474e51faddb 227 Hamap MF_01235 Putative N-acetylmannosamine-6-phosphate 2-epimerase [nanE]. 6 227 40.736 T 14-10-2018 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase GO:0006051|GO:0047465 KEGG: 00520+5.1.3.9 DB29_01298 764402d180bc37d478d0c474e51faddb 227 SUPERFAMILY SSF51366 8 226 6.59E-59 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 DB29_01298 764402d180bc37d478d0c474e51faddb 227 Pfam PF04131 Putative N-acetylmannosamine-6-phosphate epimerase 30 227 2.6E-69 T 14-10-2018 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase GO:0006051|GO:0047465 KEGG: 00520+5.1.3.9 DB29_01298 764402d180bc37d478d0c474e51faddb 227 Gene3D G3DSA:3.20.20.70 6 227 5.9E-94 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DB29_01508 73f9d91db027bb53eac253d39e80d59a 227 SUPERFAMILY SSF52172 1 183 1.04E-38 T 14-10-2018 IPR011006 CheY-like superfamily DB29_01508 73f9d91db027bb53eac253d39e80d59a 227 Gene3D G3DSA:1.10.10.10 126 226 1.7E-33 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_01508 73f9d91db027bb53eac253d39e80d59a 227 Pfam PF00486 Transcriptional regulatory protein, C terminal 150 224 1.7E-24 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DB29_01508 73f9d91db027bb53eac253d39e80d59a 227 SMART SM00862 150 224 5.1E-29 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DB29_01508 73f9d91db027bb53eac253d39e80d59a 227 Pfam PF00072 Response regulator receiver domain 6 114 3.0E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DB29_01508 73f9d91db027bb53eac253d39e80d59a 227 Gene3D G3DSA:3.40.50.2300 1 125 2.4E-35 T 14-10-2018 DB29_01508 73f9d91db027bb53eac253d39e80d59a 227 SMART SM00448 4 114 6.2E-39 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DB29_02503 b5b0d5408b7671f3e8ebdf97b7c2e8b1 346 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 120 331 1.1E-35 T 14-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 DB29_02503 b5b0d5408b7671f3e8ebdf97b7c2e8b1 346 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 10 113 2.3E-24 T 14-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 DB29_02503 b5b0d5408b7671f3e8ebdf97b7c2e8b1 346 Gene3D G3DSA:3.20.20.70 7 338 3.1E-98 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DB29_02503 b5b0d5408b7671f3e8ebdf97b7c2e8b1 346 SUPERFAMILY SSF51395 4 333 2.88E-92 T 14-10-2018 DB29_02438 83609e2205396d2ed43e5c349be43591 335 SUPERFAMILY SSF53822 58 320 5.22E-66 T 14-10-2018 IPR028082 Periplasmic binding protein-like I DB29_02438 83609e2205396d2ed43e5c349be43591 335 Gene3D G3DSA:3.40.50.2300 65 306 5.4E-68 T 14-10-2018 DB29_02438 83609e2205396d2ed43e5c349be43591 335 SMART SM00354 2 71 1.1E-30 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DB29_02438 83609e2205396d2ed43e5c349be43591 335 Gene3D G3DSA:3.40.50.2300 162 285 5.4E-68 T 14-10-2018 DB29_02438 83609e2205396d2ed43e5c349be43591 335 Pfam PF13377 Periplasmic binding protein-like domain 168 326 2.0E-31 T 14-10-2018 DB29_02438 83609e2205396d2ed43e5c349be43591 335 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 4 14 5.8E-5 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DB29_02438 83609e2205396d2ed43e5c349be43591 335 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 14 24 5.8E-5 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DB29_02438 83609e2205396d2ed43e5c349be43591 335 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 48 5.8E-16 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DB29_02438 83609e2205396d2ed43e5c349be43591 335 SUPERFAMILY SSF47413 2 59 1.66E-15 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DB29_02438 83609e2205396d2ed43e5c349be43591 335 Gene3D G3DSA:1.10.260.40 1 59 1.1E-19 T 14-10-2018 DB29_00462 41d2c0f2e1e67ebd219030bfe90bfe26 342 Gene3D G3DSA:2.40.10.240 64 162 2.0E-128 T 14-10-2018 DB29_00462 41d2c0f2e1e67ebd219030bfe90bfe26 342 Gene3D G3DSA:3.40.1780.10 14 340 2.0E-128 T 14-10-2018 DB29_00462 41d2c0f2e1e67ebd219030bfe90bfe26 342 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 341 45.219 T 14-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 DB29_00462 41d2c0f2e1e67ebd219030bfe90bfe26 342 SUPERFAMILY SSF111337 1 340 2.62E-137 T 14-10-2018 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 DB29_00462 41d2c0f2e1e67ebd219030bfe90bfe26 342 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1 340 1.9E-140 T 14-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 DB29_00462 41d2c0f2e1e67ebd219030bfe90bfe26 342 Pfam PF02547 Queuosine biosynthesis protein 4 340 6.5E-138 T 14-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 DB29_04075 e708e5567437b8c10c7b8101d8c25e15 296 Pfam PF13413 Helix-turn-helix domain 7 68 9.5E-22 T 14-10-2018 DB29_04075 e708e5567437b8c10c7b8101d8c25e15 296 Gene3D G3DSA:1.10.260.40 1 100 2.3E-30 T 14-10-2018 DB29_04075 e708e5567437b8c10c7b8101d8c25e15 296 SUPERFAMILY SSF47413 2 75 1.07E-6 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DB29_03794 b440756cf18e00b491777127c81927ab 196 TIGRFAM TIGR02896 spore_III_AF: stage III sporulation protein AF 1 102 4.2E-25 T 14-10-2018 IPR014245 Sporulation stage III, protein AF DB29_03794 b440756cf18e00b491777127c81927ab 196 Pfam PF09581 Stage III sporulation protein AF (Spore_III_AF) 1 187 2.6E-34 T 14-10-2018 IPR014245 Sporulation stage III, protein AF DB29_02872 64c60de4934772c8fd3297cc9f07b192 67 ProSitePatterns PS00684 Small, acid-soluble spore proteins, alpha/beta type, signature 2. 41 55 - T 14-10-2018 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site GO:0003690|GO:0006265 DB29_02872 64c60de4934772c8fd3297cc9f07b192 67 Gene3D G3DSA:1.10.8.910 8 67 2.8E-32 T 14-10-2018 IPR038300 SASP, alpha/beta-type superfamily DB29_02872 64c60de4934772c8fd3297cc9f07b192 67 ProSitePatterns PS00304 Small, acid-soluble spore proteins, alpha/beta type, signature 1. 23 32 - T 14-10-2018 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site GO:0003690|GO:0006265 DB29_02872 64c60de4934772c8fd3297cc9f07b192 67 Pfam PF00269 Small, acid-soluble spore proteins, alpha/beta type 8 62 2.9E-23 T 14-10-2018 IPR001448 Small acid-soluble spore protein, alpha/beta-type GO:0003690|GO:0006265 DB29_03362 8f21286ec9510dbdef8dd78f7a123352 297 Pfam PF08544 GHMP kinases C terminal 198 276 7.9E-10 T 14-10-2018 IPR013750 GHMP kinase, C-terminal domain DB29_03362 8f21286ec9510dbdef8dd78f7a123352 297 PRINTS PR00958 Homoserine kinase signature 162 179 1.7E-36 T 14-10-2018 DB29_03362 8f21286ec9510dbdef8dd78f7a123352 297 PRINTS PR00958 Homoserine kinase signature 10 25 1.7E-36 T 14-10-2018 DB29_03362 8f21286ec9510dbdef8dd78f7a123352 297 PRINTS PR00958 Homoserine kinase signature 243 258 1.7E-36 T 14-10-2018 DB29_03362 8f21286ec9510dbdef8dd78f7a123352 297 PRINTS PR00958 Homoserine kinase signature 90 105 1.7E-36 T 14-10-2018 DB29_03362 8f21286ec9510dbdef8dd78f7a123352 297 PRINTS PR00958 Homoserine kinase signature 124 137 1.7E-36 T 14-10-2018 DB29_03362 8f21286ec9510dbdef8dd78f7a123352 297 Gene3D G3DSA:3.30.230.10 2 158 8.9E-39 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DB29_03362 8f21286ec9510dbdef8dd78f7a123352 297 SUPERFAMILY SSF54211 2 146 2.96E-28 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DB29_03362 8f21286ec9510dbdef8dd78f7a123352 297 Hamap MF_00384 Homoserine kinase [thrB]. 5 293 27.682 T 14-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 DB29_03362 8f21286ec9510dbdef8dd78f7a123352 297 TIGRFAM TIGR00191 thrB: homoserine kinase 3 292 7.9E-79 T 14-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 DB29_03362 8f21286ec9510dbdef8dd78f7a123352 297 Gene3D G3DSA:3.30.70.890 159 288 3.2E-37 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily DB29_03362 8f21286ec9510dbdef8dd78f7a123352 297 SUPERFAMILY SSF55060 157 278 1.1E-30 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily DB29_03362 8f21286ec9510dbdef8dd78f7a123352 297 Pfam PF00288 GHMP kinases N terminal domain 77 137 1.3E-12 T 14-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 DB29_03362 8f21286ec9510dbdef8dd78f7a123352 297 PIRSF PIRSF000676 1 296 6.6E-84 T 14-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 DB29_01813 e3bcfcbcc8cebf1eb564a890f3ef462b 345 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 229 341 9.4E-11 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DB29_01813 e3bcfcbcc8cebf1eb564a890f3ef462b 345 PRINTS PR00344 Bacterial sensor protein C-terminal signature 270 284 1.2E-5 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB29_01813 e3bcfcbcc8cebf1eb564a890f3ef462b 345 PRINTS PR00344 Bacterial sensor protein C-terminal signature 304 322 1.2E-5 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB29_01813 e3bcfcbcc8cebf1eb564a890f3ef462b 345 PRINTS PR00344 Bacterial sensor protein C-terminal signature 328 341 1.2E-5 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB29_01813 e3bcfcbcc8cebf1eb564a890f3ef462b 345 Gene3D G3DSA:3.30.565.10 163 338 9.8E-22 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB29_01813 e3bcfcbcc8cebf1eb564a890f3ef462b 345 SUPERFAMILY SSF55874 174 341 8.38E-22 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB29_01813 e3bcfcbcc8cebf1eb564a890f3ef462b 345 SMART SM00387 228 344 1.5E-12 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DB29_03583 3ea6a72b7cc94f69e18ca0e2459bc395 325 SMART SM00893 5 190 6.2E-47 T 14-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 DB29_03583 3ea6a72b7cc94f69e18ca0e2459bc395 325 SUPERFAMILY SSF52467 198 318 3.27E-48 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily DB29_03583 3ea6a72b7cc94f69e18ca0e2459bc395 325 SUPERFAMILY SSF52402 3 192 3.98E-48 T 14-10-2018 DB29_03583 3ea6a72b7cc94f69e18ca0e2459bc395 325 Gene3D G3DSA:3.40.50.620 1 192 3.9E-55 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DB29_03583 3ea6a72b7cc94f69e18ca0e2459bc395 325 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 198 281 9.0E-34 T 14-10-2018 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 DB29_03583 3ea6a72b7cc94f69e18ca0e2459bc395 325 PIRSF PIRSF000089 1 322 8.4E-112 T 14-10-2018 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 Reactome: R-HSA-611105 DB29_03583 3ea6a72b7cc94f69e18ca0e2459bc395 325 Gene3D G3DSA:3.40.50.1220 193 324 6.9E-56 T 14-10-2018 DB29_03583 3ea6a72b7cc94f69e18ca0e2459bc395 325 Pfam PF01012 Electron transfer flavoprotein domain 6 179 7.5E-46 T 14-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 DB29_00876 b1faf0ca5f4b5eee8fdc6a5fec320e51 347 SUPERFAMILY SSF52540 29 243 7.69E-34 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_00876 b1faf0ca5f4b5eee8fdc6a5fec320e51 347 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 247 340 9.0E-23 T 14-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal DB29_00876 b1faf0ca5f4b5eee8fdc6a5fec320e51 347 SMART SM00833 247 341 1.4E-13 T 14-10-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal DB29_00876 b1faf0ca5f4b5eee8fdc6a5fec320e51 347 Gene3D G3DSA:3.40.50.300 26 223 3.5E-65 T 14-10-2018 DB29_00876 b1faf0ca5f4b5eee8fdc6a5fec320e51 347 Gene3D G3DSA:3.30.1220.10 224 342 8.4E-37 T 14-10-2018 IPR036627 CobW-like, C-terminal domain superfamily DB29_00876 b1faf0ca5f4b5eee8fdc6a5fec320e51 347 SUPERFAMILY SSF90002 247 341 2.22E-24 T 14-10-2018 DB29_00876 b1faf0ca5f4b5eee8fdc6a5fec320e51 347 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 29 203 2.3E-55 T 14-10-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain DB29_00988 78203c92b689d13b844ae1f0da75fc47 251 Gene3D G3DSA:1.10.490.50 163 251 9.7E-22 T 14-10-2018 IPR036244 TipA-like multidrug resistance regulator, antibiotic-recognition domain DB29_00988 78203c92b689d13b844ae1f0da75fc47 251 SUPERFAMILY SSF89082 163 250 1.14E-25 T 14-10-2018 IPR036244 TipA-like multidrug resistance regulator, antibiotic-recognition domain DB29_00988 78203c92b689d13b844ae1f0da75fc47 251 Gene3D G3DSA:1.10.1660.10 1 144 1.6E-39 T 14-10-2018 DB29_00988 78203c92b689d13b844ae1f0da75fc47 251 SUPERFAMILY SSF46955 3 106 5.86E-28 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily DB29_00988 78203c92b689d13b844ae1f0da75fc47 251 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 4 15 9.0E-5 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DB29_00988 78203c92b689d13b844ae1f0da75fc47 251 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 39 59 9.0E-5 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DB29_00988 78203c92b689d13b844ae1f0da75fc47 251 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 15 28 9.0E-5 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DB29_00988 78203c92b689d13b844ae1f0da75fc47 251 Pfam PF13411 MerR HTH family regulatory protein 3 68 3.4E-16 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DB29_00988 78203c92b689d13b844ae1f0da75fc47 251 Pfam PF07739 TipAS antibiotic-recognition domain 135 249 8.1E-36 T 14-10-2018 IPR012925 TipAS antibiotic-recognition domain DB29_00988 78203c92b689d13b844ae1f0da75fc47 251 SMART SM00422 3 72 1.6E-23 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DB29_03573 e316fe2f7b0543ba2129b85604ef6fec 808 SUPERFAMILY SSF56037 211 402 1.54E-68 T 14-10-2018 DB29_03573 e316fe2f7b0543ba2129b85604ef6fec 808 SMART SM00896 714 807 1.3E-48 T 14-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 DB29_03573 e316fe2f7b0543ba2129b85604ef6fec 808 Gene3D G3DSA:3.30.56.10 4 190 6.3E-67 T 14-10-2018 DB29_03573 e316fe2f7b0543ba2129b85604ef6fec 808 SMART SM00873 223 396 1.1E-87 T 14-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 DB29_03573 e316fe2f7b0543ba2129b85604ef6fec 808 Pfam PF03484 tRNA synthetase B5 domain 416 481 1.6E-16 T 14-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 DB29_03573 e316fe2f7b0543ba2129b85604ef6fec 808 SUPERFAMILY SSF46955 414 485 1.01E-16 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily DB29_03573 e316fe2f7b0543ba2129b85604ef6fec 808 Gene3D G3DSA:3.50.40.10 207 406 4.2E-79 T 14-10-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 KEGG: 00970+6.1.1.20 DB29_03573 e316fe2f7b0543ba2129b85604ef6fec 808 SUPERFAMILY SSF54991 709 807 7.32E-32 T 14-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 DB29_03573 e316fe2f7b0543ba2129b85604ef6fec 808 Pfam PF03483 B3/4 domain 225 396 7.1E-65 T 14-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 DB29_03573 e316fe2f7b0543ba2129b85604ef6fec 808 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 801 44.845 T 14-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 DB29_03573 e316fe2f7b0543ba2129b85604ef6fec 808 Gene3D G3DSA:2.40.50.140 40 163 6.3E-67 T 14-10-2018 DB29_03573 e316fe2f7b0543ba2129b85604ef6fec 808 Pfam PF03147 Ferredoxin-fold anticodon binding domain 714 807 1.3E-30 T 14-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 DB29_03573 e316fe2f7b0543ba2129b85604ef6fec 808 Gene3D G3DSA:3.30.56.10 412 485 1.8E-21 T 14-10-2018 DB29_03573 e316fe2f7b0543ba2129b85604ef6fec 808 Gene3D G3DSA:3.30.930.10 498 702 1.1E-57 T 14-10-2018 DB29_03573 e316fe2f7b0543ba2129b85604ef6fec 808 SMART SM00874 413 481 1.6E-23 T 14-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 DB29_03573 e316fe2f7b0543ba2129b85604ef6fec 808 SUPERFAMILY SSF50249 40 201 2.69E-46 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DB29_03573 e316fe2f7b0543ba2129b85604ef6fec 808 SUPERFAMILY SSF55681 477 700 2.53E-48 T 14-10-2018 DB29_03573 e316fe2f7b0543ba2129b85604ef6fec 808 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 2 807 4.1E-263 T 14-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 DB29_03573 e316fe2f7b0543ba2129b85604ef6fec 808 Pfam PF01588 Putative tRNA binding domain 46 129 2.4E-23 T 14-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 DB29_03573 e316fe2f7b0543ba2129b85604ef6fec 808 Gene3D G3DSA:3.30.70.380 715 808 9.4E-32 T 14-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 DB29_02946 a2e8e26a240658f0c0e813b479cfef74 420 SUPERFAMILY SSF103473 4 396 5.62E-22 T 14-10-2018 IPR036259 MFS transporter superfamily DB29_02946 a2e8e26a240658f0c0e813b479cfef74 420 Gene3D G3DSA:1.20.1250.20 4 394 7.7E-12 T 14-10-2018 DB29_02946 a2e8e26a240658f0c0e813b479cfef74 420 Pfam PF05977 Transmembrane secretion effector 7 406 1.3E-8 T 14-10-2018 IPR010290 Transmembrane secretion effector DB29_02188 81889589d18663bd9a413bac8afb47a5 310 SUPERFAMILY SSF53590 1 304 4.84E-76 T 14-10-2018 IPR036452 Ribonucleoside hydrolase-like DB29_02188 81889589d18663bd9a413bac8afb47a5 310 Gene3D G3DSA:3.90.245.10 1 308 1.2E-73 T 14-10-2018 IPR036452 Ribonucleoside hydrolase-like DB29_02188 81889589d18663bd9a413bac8afb47a5 310 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 3 299 3.3E-61 T 14-10-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain DB29_03168 40e9d77debecaccb60142947347edfa6 447 Gene3D G3DSA:3.40.190.10 34 445 6.5E-52 T 14-10-2018 DB29_03168 40e9d77debecaccb60142947347edfa6 447 SUPERFAMILY SSF53850 19 443 1.15E-49 T 14-10-2018 DB29_03168 40e9d77debecaccb60142947347edfa6 447 Pfam PF01547 Bacterial extracellular solute-binding protein 49 216 1.1E-18 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein DB29_01421 18b292662772b21bf7421cb4bf7babc4 370 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 37 146 2.1E-9 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 DB29_01421 18b292662772b21bf7421cb4bf7babc4 370 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 163 237 3.2E-6 T 14-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 DB29_01421 18b292662772b21bf7421cb4bf7babc4 370 SUPERFAMILY SSF51735 31 175 1.62E-24 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_01421 18b292662772b21bf7421cb4bf7babc4 370 Gene3D G3DSA:3.30.360.10 148 338 6.2E-119 T 14-10-2018 DB29_01421 18b292662772b21bf7421cb4bf7babc4 370 Gene3D G3DSA:3.40.50.720 31 337 6.2E-119 T 14-10-2018 DB29_01421 18b292662772b21bf7421cb4bf7babc4 370 SUPERFAMILY SSF55347 160 338 4.74E-25 T 14-10-2018 DB29_00519 61c358051b50f1f9886cf3577f7ff097 390 Gene3D G3DSA:1.20.140.10 235 389 1.5E-56 T 14-10-2018 DB29_00519 61c358051b50f1f9886cf3577f7ff097 390 SUPERFAMILY SSF56645 4 243 1.83E-86 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 DB29_00519 61c358051b50f1f9886cf3577f7ff097 390 Gene3D G3DSA:1.10.540.10 1 120 3.0E-44 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 DB29_00519 61c358051b50f1f9886cf3577f7ff097 390 Gene3D G3DSA:2.40.110.10 122 234 9.3E-42 T 14-10-2018 DB29_00519 61c358051b50f1f9886cf3577f7ff097 390 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 337 356 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 DB29_00519 61c358051b50f1f9886cf3577f7ff097 390 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 230 378 9.3E-54 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 DB29_00519 61c358051b50f1f9886cf3577f7ff097 390 SUPERFAMILY SSF47203 228 378 4.51E-60 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 DB29_00519 61c358051b50f1f9886cf3577f7ff097 390 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 118 7.4E-38 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 DB29_00519 61c358051b50f1f9886cf3577f7ff097 390 PIRSF PIRSF016578 130 385 1.2E-17 T 14-10-2018 DB29_00519 61c358051b50f1f9886cf3577f7ff097 390 PIRSF PIRSF016578 1 114 1.2E-6 T 14-10-2018 DB29_00519 61c358051b50f1f9886cf3577f7ff097 390 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 124 136 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 DB29_00519 61c358051b50f1f9886cf3577f7ff097 390 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 122 218 4.4E-28 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 DB29_01198 39f95fca2cc942a100b282b16d3bbf94 253 SUPERFAMILY SSF144091 12 194 4.32E-42 T 14-10-2018 DB29_01198 39f95fca2cc942a100b282b16d3bbf94 253 Gene3D G3DSA:1.20.1540.10 9 195 1.7E-40 T 14-10-2018 IPR035952 Rhomboid-like superfamily DB29_01198 39f95fca2cc942a100b282b16d3bbf94 253 Pfam PF01694 Rhomboid family 54 192 1.2E-35 T 14-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 DB29_03588 ae6950c50c1aab887b9d90c410e50fe1 202 TIGRFAM TIGR02046 sdhC_b558_fam: succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family 8 202 5.5E-56 T 14-10-2018 IPR011138 Succinate dehydrogenase cytochrome b558 subunit DB29_03588 ae6950c50c1aab887b9d90c410e50fe1 202 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 91 191 5.2E-13 T 14-10-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 DB29_03588 ae6950c50c1aab887b9d90c410e50fe1 202 PIRSF PIRSF000170 1 202 2.9E-100 T 14-10-2018 IPR016002 Succinate dehydrogenase cytochrome b558 subunit, Firmicute DB29_03588 ae6950c50c1aab887b9d90c410e50fe1 202 SUPERFAMILY SSF81343 5 201 2.35E-62 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 DB29_03588 ae6950c50c1aab887b9d90c410e50fe1 202 Gene3D G3DSA:1.20.1300.10 2 202 9.1E-51 T 14-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 DB29_02156 d2d343d80a03a168a8db54f6e4faabe0 213 SMART SM00882 6 202 7.9E-75 T 14-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 DB29_02156 d2d343d80a03a168a8db54f6e4faabe0 213 Gene3D G3DSA:3.40.1080.10 1 213 5.4E-102 T 14-10-2018 DB29_02156 d2d343d80a03a168a8db54f6e4faabe0 213 TIGRFAM TIGR02428 pcaJ_scoB_fam: 3-oxoacid CoA-transferase, B subunit 4 209 4.0E-95 T 14-10-2018 IPR012791 3-oxoacid CoA-transferase, subunit B GO:0008410 Reactome: R-HSA-77108 DB29_02156 d2d343d80a03a168a8db54f6e4faabe0 213 ProSitePatterns PS01274 Coenzyme A transferases signature 2. 44 52 - T 14-10-2018 IPR004164 Coenzyme A transferase active site GO:0008410 Reactome: R-HSA-77108 DB29_02156 d2d343d80a03a168a8db54f6e4faabe0 213 Pfam PF01144 Coenzyme A transferase 10 201 6.3E-46 T 14-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 DB29_02156 d2d343d80a03a168a8db54f6e4faabe0 213 SUPERFAMILY SSF100950 3 210 6.98E-72 T 14-10-2018 IPR037171 NagB/RpiA transferase-like DB29_01575 fbfd2e2c6ee06a00b37d9b773210825b 339 Gene3D G3DSA:3.40.190.150 46 327 7.5E-67 T 14-10-2018 DB29_01575 fbfd2e2c6ee06a00b37d9b773210825b 339 Gene3D G3DSA:3.40.190.10 142 263 7.5E-67 T 14-10-2018 DB29_01575 fbfd2e2c6ee06a00b37d9b773210825b 339 SUPERFAMILY SSF53850 137 299 1.4E-9 T 14-10-2018 DB29_01575 fbfd2e2c6ee06a00b37d9b773210825b 339 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 66 334 2.0E-33 T 14-10-2018 IPR005064 Bordetella uptake gene GO:0030288 DB29_01575 fbfd2e2c6ee06a00b37d9b773210825b 339 PIRSF PIRSF017082 7 338 7.0E-81 T 14-10-2018 IPR005064 Bordetella uptake gene GO:0030288 DB29_00754 7e01d02cc28130f881fd9454f095f42a 336 SUPERFAMILY SSF55729 103 256 8.48E-9 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase DB29_00598 42eb0b49b5cd3706f5a293f8820d6292 269 Pfam PF01501 Glycosyl transferase family 8 2 250 1.5E-34 T 14-10-2018 IPR002495 Glycosyl transferase, family 8 GO:0016757 DB29_00598 42eb0b49b5cd3706f5a293f8820d6292 269 Gene3D G3DSA:3.90.550.10 1 267 3.1E-74 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DB29_00598 42eb0b49b5cd3706f5a293f8820d6292 269 SUPERFAMILY SSF53448 1 265 1.63E-61 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DB29_02273 93988a09fe52968649b317d1281d9763 153 Pfam PF09671 Spore coat protein (Spore_GerQ) 63 137 2.1E-37 T 14-10-2018 IPR014099 Spore coat protein GerQ DB29_02273 93988a09fe52968649b317d1281d9763 153 PIRSF PIRSF038931 1 153 3.1E-71 T 14-10-2018 IPR014099 Spore coat protein GerQ DB29_02273 93988a09fe52968649b317d1281d9763 153 TIGRFAM TIGR02728 spore_gerQ: spore coat protein GerQ 60 141 1.5E-39 T 14-10-2018 IPR014099 Spore coat protein GerQ DB29_02632 ee6c2d0586d4b9d1bdd8640345f27a7a 226 SUPERFAMILY SSF53681 1 112 6.87E-27 T 14-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 DB29_02632 ee6c2d0586d4b9d1bdd8640345f27a7a 226 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 79 87 - T 14-10-2018 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 DB29_02632 ee6c2d0586d4b9d1bdd8640345f27a7a 226 TIGRFAM TIGR00035 asp_race: aspartate racemase 1 225 8.3E-38 T 14-10-2018 IPR004380 Aspartate racemase GO:0006520|GO:0016855 DB29_02632 ee6c2d0586d4b9d1bdd8640345f27a7a 226 Gene3D G3DSA:3.40.50.1860 2 215 1.6E-51 T 14-10-2018 DB29_02632 ee6c2d0586d4b9d1bdd8640345f27a7a 226 Gene3D G3DSA:3.40.50.1860 105 209 1.6E-51 T 14-10-2018 DB29_02632 ee6c2d0586d4b9d1bdd8640345f27a7a 226 SUPERFAMILY SSF53681 116 222 3.01E-19 T 14-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 DB29_02632 ee6c2d0586d4b9d1bdd8640345f27a7a 226 Pfam PF01177 Asp/Glu/Hydantoin racemase 6 217 3.7E-38 T 14-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 DB29_01724 f28d9f297609de827025c4dc2cdc0dad 300 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 118 297 1.6E-12 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DB29_01724 f28d9f297609de827025c4dc2cdc0dad 300 Gene3D G3DSA:1.10.3720.10 53 297 7.9E-59 T 14-10-2018 IPR035906 MetI-like superfamily DB29_01724 f28d9f297609de827025c4dc2cdc0dad 300 SUPERFAMILY SSF161098 57 287 2.49E-48 T 14-10-2018 IPR035906 MetI-like superfamily DB29_03195 82252bb599cb57e25e56de3f9343e948 514 Pfam PF00535 Glycosyl transferase family 2 37 197 1.6E-24 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 DB29_03195 82252bb599cb57e25e56de3f9343e948 514 Gene3D G3DSA:3.90.550.10 5 287 1.6E-40 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DB29_03195 82252bb599cb57e25e56de3f9343e948 514 SUPERFAMILY SSF53448 35 253 3.84E-40 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DB29_04343 2d5d13d2c9c350b5108f301ab7db2f94 206 SUPERFAMILY SSF53474 5 202 2.03E-51 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DB29_04343 2d5d13d2c9c350b5108f301ab7db2f94 206 Gene3D G3DSA:3.40.50.1820 2 202 1.7E-49 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DB29_04343 2d5d13d2c9c350b5108f301ab7db2f94 206 Pfam PF02230 Phospholipase/Carboxylesterase 9 199 1.5E-12 T 14-10-2018 IPR003140 Phospholipase/carboxylesterase/thioesterase GO:0016787 DB29_03043 a08bfb830bf5abbdaf1647d198305f3d 171 Pfam PF03608 PTS system enzyme II sorbitol-specific factor 4 170 2.8E-73 T 14-10-2018 IPR004699 Phosphotransferase system, enzyme II sorbitol-specific factor GO:0009401|GO:0016021 DB29_03043 a08bfb830bf5abbdaf1647d198305f3d 171 PIRSF PIRSF038321 1 171 4.8E-73 T 14-10-2018 IPR004699 Phosphotransferase system, enzyme II sorbitol-specific factor GO:0009401|GO:0016021 DB29_02598 5e04c60e607a957d0155a883ea69e48c 250 Pfam PF09339 IclR helix-turn-helix domain 7 54 7.9E-8 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 DB29_02598 5e04c60e607a957d0155a883ea69e48c 250 Gene3D G3DSA:1.10.10.10 4 73 5.8E-15 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_02598 5e04c60e607a957d0155a883ea69e48c 250 Gene3D G3DSA:3.30.450.40 74 250 1.5E-52 T 14-10-2018 IPR029016 GAF-like domain superfamily DB29_02598 5e04c60e607a957d0155a883ea69e48c 250 SUPERFAMILY SSF55781 68 248 1.57E-45 T 14-10-2018 DB29_02598 5e04c60e607a957d0155a883ea69e48c 250 SMART SM00346 5 92 2.1E-11 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 DB29_02598 5e04c60e607a957d0155a883ea69e48c 250 Pfam PF01614 Bacterial transcriptional regulator 119 243 4.3E-29 T 14-10-2018 IPR014757 Transcription regulator IclR, C-terminal DB29_02598 5e04c60e607a957d0155a883ea69e48c 250 SUPERFAMILY SSF46785 6 74 3.18E-11 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_01480 4de11b071bec65cd62ef47de08f34ede 288 SUPERFAMILY SSF53850 41 278 1.91E-77 T 14-10-2018 DB29_01480 4de11b071bec65cd62ef47de08f34ede 288 Pfam PF03180 NLPA lipoprotein 42 276 9.1E-80 T 14-10-2018 IPR004872 Lipoprotein NlpA family DB29_01480 4de11b071bec65cd62ef47de08f34ede 288 Gene3D G3DSA:3.40.190.10 43 268 1.5E-88 T 14-10-2018 DB29_01480 4de11b071bec65cd62ef47de08f34ede 288 Gene3D G3DSA:3.40.190.10 119 228 1.5E-88 T 14-10-2018 DB29_01480 4de11b071bec65cd62ef47de08f34ede 288 PIRSF PIRSF002854 1 278 6.6E-83 T 14-10-2018 IPR004872 Lipoprotein NlpA family DB29_02677 2a7f715310ff4b4607de0d4cd8ce29ac 235 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 26 40 5.1E-7 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DB29_02677 2a7f715310ff4b4607de0d4cd8ce29ac 235 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 40 56 5.1E-7 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DB29_02677 2a7f715310ff4b4607de0d4cd8ce29ac 235 SUPERFAMILY SSF46785 3 68 6.51E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_02677 2a7f715310ff4b4607de0d4cd8ce29ac 235 Pfam PF07702 UTRA domain 88 212 2.6E-26 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 DB29_02677 2a7f715310ff4b4607de0d4cd8ce29ac 235 SMART SM00345 7 66 1.0E-17 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DB29_02677 2a7f715310ff4b4607de0d4cd8ce29ac 235 Gene3D G3DSA:1.10.10.10 1 73 7.0E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_02677 2a7f715310ff4b4607de0d4cd8ce29ac 235 Gene3D G3DSA:3.40.1410.10 78 223 6.2E-26 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily DB29_02677 2a7f715310ff4b4607de0d4cd8ce29ac 235 SMART SM00866 83 220 5.9E-14 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 DB29_02677 2a7f715310ff4b4607de0d4cd8ce29ac 235 SUPERFAMILY SSF64288 90 227 6.91E-30 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily DB29_02677 2a7f715310ff4b4607de0d4cd8ce29ac 235 Pfam PF00392 Bacterial regulatory proteins, gntR family 5 66 7.9E-19 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DB29_03959 eadde847e7e5dbf139c6fb628c41acec 706 Gene3D G3DSA:1.10.510.10 91 282 2.4E-55 T 14-10-2018 DB29_03959 eadde847e7e5dbf139c6fb628c41acec 706 SMART SM00220 10 270 2.6E-71 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 DB29_03959 eadde847e7e5dbf139c6fb628c41acec 706 Pfam PF00069 Protein kinase domain 10 257 3.5E-56 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 DB29_03959 eadde847e7e5dbf139c6fb628c41acec 706 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 129 141 - T 14-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 DB29_03959 eadde847e7e5dbf139c6fb628c41acec 706 Gene3D G3DSA:3.30.10.20 447 510 1.9E-12 T 14-10-2018 DB29_03959 eadde847e7e5dbf139c6fb628c41acec 706 SUPERFAMILY SSF56112 6 262 4.59E-83 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily DB29_03959 eadde847e7e5dbf139c6fb628c41acec 706 Pfam PF03793 PASTA domain 516 575 4.1E-11 T 14-10-2018 IPR005543 PASTA domain DB29_03959 eadde847e7e5dbf139c6fb628c41acec 706 Pfam PF03793 PASTA domain 447 509 3.2E-12 T 14-10-2018 IPR005543 PASTA domain DB29_03959 eadde847e7e5dbf139c6fb628c41acec 706 Pfam PF03793 PASTA domain 381 441 1.7E-13 T 14-10-2018 IPR005543 PASTA domain DB29_03959 eadde847e7e5dbf139c6fb628c41acec 706 Gene3D G3DSA:3.30.10.20 514 578 1.5E-13 T 14-10-2018 DB29_03959 eadde847e7e5dbf139c6fb628c41acec 706 Gene3D G3DSA:3.30.10.20 381 444 1.1E-14 T 14-10-2018 DB29_03959 eadde847e7e5dbf139c6fb628c41acec 706 SUPERFAMILY SSF54184 380 440 1.83E-5 T 14-10-2018 DB29_03959 eadde847e7e5dbf139c6fb628c41acec 706 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 16 39 - T 14-10-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 DB29_03959 eadde847e7e5dbf139c6fb628c41acec 706 SMART SM00740 511 576 3.5E-9 T 14-10-2018 IPR005543 PASTA domain DB29_03959 eadde847e7e5dbf139c6fb628c41acec 706 SMART SM00740 443 510 9.0E-13 T 14-10-2018 IPR005543 PASTA domain DB29_03959 eadde847e7e5dbf139c6fb628c41acec 706 SMART SM00740 376 442 7.3E-14 T 14-10-2018 IPR005543 PASTA domain DB29_03959 eadde847e7e5dbf139c6fb628c41acec 706 Gene3D G3DSA:3.30.200.20 1 89 1.1E-31 T 14-10-2018 DB29_02453 d39187d037330e287b8ef30b8f8fe084 330 Pfam PF01497 Periplasmic binding protein 60 306 2.7E-33 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain DB29_02453 d39187d037330e287b8ef30b8f8fe084 330 SUPERFAMILY SSF53807 55 328 2.59E-56 T 14-10-2018 DB29_02453 d39187d037330e287b8ef30b8f8fe084 330 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 109 124 9.9E-9 T 14-10-2018 DB29_02453 d39187d037330e287b8ef30b8f8fe084 330 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 309 322 9.9E-9 T 14-10-2018 DB29_02453 d39187d037330e287b8ef30b8f8fe084 330 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 77 95 9.9E-9 T 14-10-2018 DB29_02453 d39187d037330e287b8ef30b8f8fe084 330 Gene3D G3DSA:3.40.50.1980 152 330 3.1E-39 T 14-10-2018 DB29_02453 d39187d037330e287b8ef30b8f8fe084 330 Gene3D G3DSA:3.40.50.1980 36 145 4.5E-29 T 14-10-2018 DB29_04074 7ba1a6cbf63f697ee583af104d63c7ea 255 Gene3D G3DSA:3.30.70.260 8 73 5.4E-5 T 14-10-2018 DB29_04074 7ba1a6cbf63f697ee583af104d63c7ea 255 Pfam PF11868 Protein of unknown function (DUF3388) 70 246 3.1E-92 T 14-10-2018 IPR024514 Domain of unknown function DUF3388 DB29_04074 7ba1a6cbf63f697ee583af104d63c7ea 255 SUPERFAMILY SSF55021 3 73 1.12E-9 T 14-10-2018 DB29_04074 7ba1a6cbf63f697ee583af104d63c7ea 255 PIRSF PIRSF021288 1 253 1.9E-135 T 14-10-2018 IPR016784 Uncharacterised protein UCP021288 with ACT domain DB29_02232 ef11d955ca1fb4fb5a8d3b7378d13885 251 SUPERFAMILY SSF52540 3 227 1.71E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_02232 ef11d955ca1fb4fb5a8d3b7378d13885 251 SMART SM00382 28 213 1.4E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_02232 ef11d955ca1fb4fb5a8d3b7378d13885 251 Gene3D G3DSA:3.40.50.300 1 248 6.1E-70 T 14-10-2018 DB29_02232 ef11d955ca1fb4fb5a8d3b7378d13885 251 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB29_02232 ef11d955ca1fb4fb5a8d3b7378d13885 251 Pfam PF00005 ABC transporter 19 164 1.5E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB29_00132 f9a4b7e9b62f6b64892fe80b376d7b17 345 Gene3D G3DSA:3.40.50.2000 147 320 1.6E-28 T 14-10-2018 DB29_00132 f9a4b7e9b62f6b64892fe80b376d7b17 345 Pfam PF13439 Glycosyltransferase Family 4 46 139 2.0E-8 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 DB29_00132 f9a4b7e9b62f6b64892fe80b376d7b17 345 Gene3D G3DSA:3.40.50.2000 22 146 1.3E-7 T 14-10-2018 DB29_00132 f9a4b7e9b62f6b64892fe80b376d7b17 345 Pfam PF00534 Glycosyl transferases group 1 154 315 2.5E-19 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 DB29_00132 f9a4b7e9b62f6b64892fe80b376d7b17 345 SUPERFAMILY SSF53756 45 335 7.85E-51 T 14-10-2018 DB29_02930 1f0652293334cb710a196bb38424f883 697 SUPERFAMILY SSF63520 304 402 9.29E-15 T 14-10-2018 IPR036634 PRD domain superfamily GO:0006355 DB29_02930 1f0652293334cb710a196bb38424f883 697 Gene3D G3DSA:1.10.1790.10 306 403 3.9E-7 T 14-10-2018 DB29_02930 1f0652293334cb710a196bb38424f883 697 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 554 691 1.4E-30 T 14-10-2018 IPR002178 PTS EIIA type-2 domain DB29_02930 1f0652293334cb710a196bb38424f883 697 SUPERFAMILY SSF63520 198 287 5.76E-7 T 14-10-2018 IPR036634 PRD domain superfamily GO:0006355 DB29_02930 1f0652293334cb710a196bb38424f883 697 Pfam PF05043 Mga helix-turn-helix domain 102 173 9.7E-7 T 14-10-2018 IPR007737 Mga helix-turn-helix domain DB29_02930 1f0652293334cb710a196bb38424f883 697 Pfam PF00874 PRD domain 208 287 5.4E-7 T 14-10-2018 IPR011608 PRD domain GO:0006355 DB29_02930 1f0652293334cb710a196bb38424f883 697 Pfam PF00874 PRD domain 313 400 5.9E-14 T 14-10-2018 IPR011608 PRD domain GO:0006355 DB29_02930 1f0652293334cb710a196bb38424f883 697 Gene3D G3DSA:3.40.930.10 549 696 2.9E-46 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 DB29_02930 1f0652293334cb710a196bb38424f883 697 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 600 616 - T 14-10-2018 IPR002178 PTS EIIA type-2 domain DB29_02930 1f0652293334cb710a196bb38424f883 697 SUPERFAMILY SSF55804 551 691 1.44E-32 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 DB29_01219 a495a0e927a0f4ec07474ad1c3323f4f 198 SUPERFAMILY SSF55469 4 197 7.85E-72 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 DB29_01219 a495a0e927a0f4ec07474ad1c3323f4f 198 Gene3D G3DSA:3.40.109.10 1 198 5.4E-90 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 DB29_01219 a495a0e927a0f4ec07474ad1c3323f4f 198 Pfam PF00881 Nitroreductase family 8 177 7.0E-13 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 DB29_00320 5da4a335c44c2f2a63faec23e00b958c 295 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 2 289 1.1E-160 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DB29_00320 5da4a335c44c2f2a63faec23e00b958c 295 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 76 96 9.2E-66 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DB29_00320 5da4a335c44c2f2a63faec23e00b958c 295 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 133 153 9.2E-66 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DB29_00320 5da4a335c44c2f2a63faec23e00b958c 295 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 107 131 9.2E-66 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DB29_00320 5da4a335c44c2f2a63faec23e00b958c 295 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 156 171 9.2E-66 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DB29_00320 5da4a335c44c2f2a63faec23e00b958c 295 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 55 70 9.2E-66 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DB29_00320 5da4a335c44c2f2a63faec23e00b958c 295 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 241 257 9.2E-66 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DB29_00320 5da4a335c44c2f2a63faec23e00b958c 295 SUPERFAMILY SSF55681 1 280 4.97E-130 T 14-10-2018 DB29_00320 5da4a335c44c2f2a63faec23e00b958c 295 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 4 280 5.4E-147 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DB29_00320 5da4a335c44c2f2a63faec23e00b958c 295 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 1 281 58.418 T 14-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DB29_00320 5da4a335c44c2f2a63faec23e00b958c 295 Gene3D G3DSA:1.20.58.180 205 285 2.0E-35 T 14-10-2018 DB29_00320 5da4a335c44c2f2a63faec23e00b958c 295 Gene3D G3DSA:3.30.930.10 1 204 1.5E-106 T 14-10-2018 DB29_02023 5a261bbd430ced8c010126982a52592a 165 SUPERFAMILY SSF53927 4 151 3.35E-54 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 DB29_02023 5a261bbd430ced8c010126982a52592a 165 Gene3D G3DSA:3.40.140.10 1 165 3.4E-62 T 14-10-2018 DB29_02023 5a261bbd430ced8c010126982a52592a 165 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 10 151 45.49 T 14-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 DB29_02023 5a261bbd430ced8c010126982a52592a 165 Pfam PF14437 MafB19-like deaminase 5 151 1.4E-45 T 14-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 DB29_02023 5a261bbd430ced8c010126982a52592a 165 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 55 92 - T 14-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 DB29_00358 319a0261dd3e2542a51c596f67a64f26 45 Pfam PF14141 YqzM-like protein 2 43 9.4E-21 T 14-10-2018 IPR025416 YqzM-like protein DB29_00424 68177a94356f5fa315c907eab2b49492 876 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 876 182.165 T 14-10-2018 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 DB29_00424 68177a94356f5fa315c907eab2b49492 876 PRINTS PR00980 Alanyl-tRNA synthetase signature 226 239 2.3E-32 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 DB29_00424 68177a94356f5fa315c907eab2b49492 876 PRINTS PR00980 Alanyl-tRNA synthetase signature 199 210 2.3E-32 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 DB29_00424 68177a94356f5fa315c907eab2b49492 876 PRINTS PR00980 Alanyl-tRNA synthetase signature 297 310 2.3E-32 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 DB29_00424 68177a94356f5fa315c907eab2b49492 876 PRINTS PR00980 Alanyl-tRNA synthetase signature 73 84 2.3E-32 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 DB29_00424 68177a94356f5fa315c907eab2b49492 876 PRINTS PR00980 Alanyl-tRNA synthetase signature 273 289 2.3E-32 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 DB29_00424 68177a94356f5fa315c907eab2b49492 876 SUPERFAMILY SSF101353 246 441 2.62E-66 T 14-10-2018 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 DB29_00424 68177a94356f5fa315c907eab2b49492 876 SMART SM00863 652 695 1.2E-22 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 DB29_00424 68177a94356f5fa315c907eab2b49492 876 Gene3D G3DSA:3.30.54.20 623 676 2.8E-53 T 14-10-2018 DB29_00424 68177a94356f5fa315c907eab2b49492 876 Gene3D G3DSA:3.30.930.10 3 241 3.4E-95 T 14-10-2018 DB29_00424 68177a94356f5fa315c907eab2b49492 876 SUPERFAMILY SSF55186 552 718 1.16E-51 T 14-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 DB29_00424 68177a94356f5fa315c907eab2b49492 876 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 652 695 1.4E-19 T 14-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 DB29_00424 68177a94356f5fa315c907eab2b49492 876 SUPERFAMILY SSF50447 453 550 2.65E-17 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily DB29_00424 68177a94356f5fa315c907eab2b49492 876 Pfam PF01411 tRNA synthetases class II (A) 9 552 4.4E-208 T 14-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 DB29_00424 68177a94356f5fa315c907eab2b49492 876 Gene3D G3DSA:2.40.30.130 453 550 1.1E-9 T 14-10-2018 DB29_00424 68177a94356f5fa315c907eab2b49492 876 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 9 855 0.0 T 14-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 DB29_00424 68177a94356f5fa315c907eab2b49492 876 SUPERFAMILY SSF55681 5 245 1.86E-89 T 14-10-2018 DB29_00424 68177a94356f5fa315c907eab2b49492 876 Gene3D G3DSA:3.10.310.40 764 874 2.0E-33 T 14-10-2018 DB29_00424 68177a94356f5fa315c907eab2b49492 876 Gene3D G3DSA:3.30.980.10 561 696 2.8E-53 T 14-10-2018 DB29_00424 68177a94356f5fa315c907eab2b49492 876 Pfam PF02272 DHHA1 domain 733 872 6.4E-28 T 14-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 DB29_03453 d4c5be64131479cae646cd5f04158fcb 105 Pfam PF13411 MerR HTH family regulatory protein 2 53 1.6E-12 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DB29_03453 d4c5be64131479cae646cd5f04158fcb 105 SUPERFAMILY SSF46955 1 103 1.17E-25 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily DB29_03453 d4c5be64131479cae646cd5f04158fcb 105 Gene3D G3DSA:1.10.1660.10 1 105 1.3E-28 T 14-10-2018 DB29_03453 d4c5be64131479cae646cd5f04158fcb 105 SMART SM00422 1 59 3.5E-8 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DB29_04167 05a063463337d583839a2932f750c265 315 Gene3D G3DSA:3.40.50.300 3 238 9.3E-71 T 14-10-2018 DB29_04167 05a063463337d583839a2932f750c265 315 SMART SM00382 28 211 6.6E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_04167 05a063463337d583839a2932f750c265 315 Pfam PF00005 ABC transporter 19 162 1.3E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB29_04167 05a063463337d583839a2932f750c265 315 SUPERFAMILY SSF52540 6 227 2.55E-64 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_04167 05a063463337d583839a2932f750c265 315 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB29_02153 d84be2e6eadb679bb1a8b05515a0234e 345 Pfam PF13377 Periplasmic binding protein-like domain 176 337 8.7E-36 T 14-10-2018 DB29_02153 d84be2e6eadb679bb1a8b05515a0234e 345 Gene3D G3DSA:3.40.50.2300 167 335 7.6E-76 T 14-10-2018 DB29_02153 d84be2e6eadb679bb1a8b05515a0234e 345 SMART SM00354 2 72 6.2E-29 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DB29_02153 d84be2e6eadb679bb1a8b05515a0234e 345 Gene3D G3DSA:1.10.260.40 1 60 4.3E-22 T 14-10-2018 DB29_02153 d84be2e6eadb679bb1a8b05515a0234e 345 SUPERFAMILY SSF47413 3 61 1.13E-17 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DB29_02153 d84be2e6eadb679bb1a8b05515a0234e 345 SUPERFAMILY SSF53822 63 338 1.28E-73 T 14-10-2018 IPR028082 Periplasmic binding protein-like I DB29_02153 d84be2e6eadb679bb1a8b05515a0234e 345 Gene3D G3DSA:3.40.50.2300 77 329 7.6E-76 T 14-10-2018 DB29_02153 d84be2e6eadb679bb1a8b05515a0234e 345 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 49 7.0E-20 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DB29_03432 1ea7da547ea26e37404e0b344e094d51 260 Gene3D G3DSA:3.40.50.1820 1 257 5.0E-56 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DB29_03432 1ea7da547ea26e37404e0b344e094d51 260 Pfam PF12146 Serine aminopeptidase, S33 8 243 5.9E-59 T 14-10-2018 IPR022742 Serine aminopeptidase, S33 DB29_03432 1ea7da547ea26e37404e0b344e094d51 260 SUPERFAMILY SSF53474 2 256 8.93E-37 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DB29_03687 d267267c76a8ba09ef5f7b7320ff95b3 280 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 15 215 2.8E-58 T 14-10-2018 IPR003740 Uncharacterised membrane protein YitT DB29_03687 d267267c76a8ba09ef5f7b7320ff95b3 280 Gene3D G3DSA:3.30.70.120 194 268 1.8E-19 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal DB29_03687 d267267c76a8ba09ef5f7b7320ff95b3 280 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 221 275 8.0E-20 T 14-10-2018 IPR019264 Domain of unknown function DUF2179 DB29_03687 d267267c76a8ba09ef5f7b7320ff95b3 280 PIRSF PIRSF006483 2 280 1.6E-91 T 14-10-2018 IPR003740 Uncharacterised membrane protein YitT DB29_02371 52650e06c2433c7c6b9063815dd4a00f 163 Gene3D G3DSA:1.20.120.450 1 162 1.9E-40 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes DB29_02371 52650e06c2433c7c6b9063815dd4a00f 163 Pfam PF05163 DinB family 4 162 1.9E-30 T 14-10-2018 IPR007837 DNA damage-inducible protein DinB DB29_02371 52650e06c2433c7c6b9063815dd4a00f 163 SUPERFAMILY SSF109854 5 160 3.14E-30 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes DB29_00329 50a2689262be5f52e7f32ce34b9ae5f0 321 SUPERFAMILY SSF52540 111 290 4.02E-37 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_00329 50a2689262be5f52e7f32ce34b9ae5f0 321 Pfam PF02562 PhoH-like protein 112 315 7.9E-94 T 14-10-2018 IPR003714 PhoH-like protein GO:0005524 DB29_00329 50a2689262be5f52e7f32ce34b9ae5f0 321 Gene3D G3DSA:3.40.50.300 108 315 5.7E-73 T 14-10-2018 DB29_03839 b41c5c538c91171ca2591fca18ec9c1f 372 Gene3D G3DSA:3.40.630.10 4 355 2.2E-115 T 14-10-2018 DB29_03839 b41c5c538c91171ca2591fca18ec9c1f 372 PIRSF PIRSF005962 1 371 4.0E-106 T 14-10-2018 IPR017439 Amidohydrolase GO:0016787 DB29_03839 b41c5c538c91171ca2591fca18ec9c1f 372 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 4 357 1.7E-86 T 14-10-2018 IPR017439 Amidohydrolase GO:0016787 DB29_03839 b41c5c538c91171ca2591fca18ec9c1f 372 SUPERFAMILY SSF55031 175 280 3.4E-27 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain DB29_03839 b41c5c538c91171ca2591fca18ec9c1f 372 Gene3D G3DSA:3.30.70.360 170 284 2.2E-115 T 14-10-2018 DB29_03839 b41c5c538c91171ca2591fca18ec9c1f 372 Pfam PF01546 Peptidase family M20/M25/M40 63 365 6.8E-23 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 DB29_03839 b41c5c538c91171ca2591fca18ec9c1f 372 Pfam PF07687 Peptidase dimerisation domain 177 266 3.8E-8 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain DB29_03839 b41c5c538c91171ca2591fca18ec9c1f 372 SUPERFAMILY SSF53187 2 366 3.77E-66 T 14-10-2018 DB29_03839 b41c5c538c91171ca2591fca18ec9c1f 372 Hamap MF_01692 N-acetyldiaminopimelate deacetylase. 1 369 63.259 T 14-10-2018 IPR023905 Acetyldiaminopimelate deacetylase GO:0009089|GO:0050118 KEGG: 00300+3.5.1.47|MetaCyc: PWY-2941 DB29_01603 9d6f6ac01d3979a9e22e2d82fd4a6c58 509 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 219 479 2.8E-44 T 14-10-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 DB29_01603 9d6f6ac01d3979a9e22e2d82fd4a6c58 509 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 33 188 1.4E-20 T 14-10-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 DB29_01603 9d6f6ac01d3979a9e22e2d82fd4a6c58 509 Gene3D G3DSA:3.40.50.720 18 284 6.6E-55 T 14-10-2018 DB29_01603 9d6f6ac01d3979a9e22e2d82fd4a6c58 509 SUPERFAMILY SSF48179 289 506 1.29E-41 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 DB29_01603 9d6f6ac01d3979a9e22e2d82fd4a6c58 509 SUPERFAMILY SSF51735 28 284 1.3E-66 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_01603 9d6f6ac01d3979a9e22e2d82fd4a6c58 509 Gene3D G3DSA:1.10.1040.10 288 506 1.5E-51 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 DB29_00476 e3a4998c166f6bbccdd9b2d6347025ea 291 ProSitePatterns PS00858 Prephenate dehydratase signature 2. 229 236 - T 14-10-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 DB29_00476 e3a4998c166f6bbccdd9b2d6347025ea 291 Gene3D G3DSA:3.40.190.10 84 173 3.2E-49 T 14-10-2018 DB29_00476 e3a4998c166f6bbccdd9b2d6347025ea 291 SUPERFAMILY SSF53850 3 186 6.19E-48 T 14-10-2018 DB29_00476 e3a4998c166f6bbccdd9b2d6347025ea 291 Pfam PF00800 Prephenate dehydratase 4 185 2.4E-54 T 14-10-2018 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 DB29_00476 e3a4998c166f6bbccdd9b2d6347025ea 291 Gene3D G3DSA:3.40.190.10 6 181 3.2E-49 T 14-10-2018 DB29_00476 e3a4998c166f6bbccdd9b2d6347025ea 291 Gene3D G3DSA:3.30.70.260 192 288 6.4E-26 T 14-10-2018 DB29_00476 e3a4998c166f6bbccdd9b2d6347025ea 291 PIRSF PIRSF001500 1 283 5.2E-64 T 14-10-2018 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 DB29_00476 e3a4998c166f6bbccdd9b2d6347025ea 291 SUPERFAMILY SSF55021 194 279 8.4E-23 T 14-10-2018 DB29_03942 1369f10ddb427661662639505b669c4a 304 SUPERFAMILY SSF51395 2 299 2.07E-84 T 14-10-2018 DB29_03942 1369f10ddb427661662639505b669c4a 304 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 40 59 - T 14-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 DB29_03942 1369f10ddb427661662639505b669c4a 304 Gene3D G3DSA:3.20.20.70 1 301 3.1E-96 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DB29_03942 1369f10ddb427661662639505b669c4a 304 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 239 259 - T 14-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 DB29_03942 1369f10ddb427661662639505b669c4a 304 TIGRFAM TIGR01037 pyrD_sub1_fam: dihydroorotate dehydrogenase family protein 4 302 5.6E-119 T 14-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 DB29_03942 1369f10ddb427661662639505b669c4a 304 Hamap MF_00224 Dihydroorotate dehydrogenase [pyrD]. 4 301 40.472 T 14-10-2018 IPR024920 Dihydroorotate dehydrogenase, class 1 GO:0004152|GO:0005737|GO:0006221 DB29_03942 1369f10ddb427661662639505b669c4a 304 Pfam PF01180 Dihydroorotate dehydrogenase 4 286 1.4E-89 T 14-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 DB29_03942 1369f10ddb427661662639505b669c4a 304 PIRSF PIRSF000164 1 303 9.6E-83 T 14-10-2018 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 DB29_01150 9c648f5676a37b1905663f53a42f6d03 289 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 129 140 - T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 DB29_01150 9c648f5676a37b1905663f53a42f6d03 289 PIRSF PIRSF001359 1 284 4.3E-98 T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 DB29_01150 9c648f5676a37b1905663f53a42f6d03 289 Pfam PF01116 Fructose-bisphosphate aldolase class-II 4 283 1.4E-93 T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 DB29_01150 9c648f5676a37b1905663f53a42f6d03 289 SUPERFAMILY SSF51569 4 284 2.2E-93 T 14-10-2018 DB29_01150 9c648f5676a37b1905663f53a42f6d03 289 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 284 4.0E-85 T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 DB29_01150 9c648f5676a37b1905663f53a42f6d03 289 Gene3D G3DSA:3.20.20.70 1 284 6.9E-101 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DB29_00330 64ec5ea003724315ddd0be8804dd9972 395 Pfam PF06898 Putative stage IV sporulation protein YqfD 9 385 2.3E-119 T 14-10-2018 IPR010690 Putative stage IV sporulation YqfD DB29_00330 64ec5ea003724315ddd0be8804dd9972 395 TIGRFAM TIGR02876 spore_yqfD: sporulation protein YqfD 7 386 6.3E-109 T 14-10-2018 IPR010690 Putative stage IV sporulation YqfD DB29_00330 64ec5ea003724315ddd0be8804dd9972 395 PIRSF PIRSF029895 1 395 1.6E-139 T 14-10-2018 IPR010690 Putative stage IV sporulation YqfD DB29_02022 60f228299d467e7363c6f5824efdf635 193 Pfam PF00574 Clp protease 15 191 4.3E-79 T 14-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA DB29_02022 60f228299d467e7363c6f5824efdf635 193 SUPERFAMILY SSF52096 11 191 1.12E-66 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily DB29_02022 60f228299d467e7363c6f5824efdf635 193 Gene3D G3DSA:3.90.226.10 1 192 5.9E-76 T 14-10-2018 DB29_02022 60f228299d467e7363c6f5824efdf635 193 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 113 126 - T 14-10-2018 IPR033135 ClpP, histidine active site DB29_02022 60f228299d467e7363c6f5824efdf635 193 PRINTS PR00127 Clp protease catalytic subunit P signature 91 108 4.8E-48 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 DB29_02022 60f228299d467e7363c6f5824efdf635 193 PRINTS PR00127 Clp protease catalytic subunit P signature 112 131 4.8E-48 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 DB29_02022 60f228299d467e7363c6f5824efdf635 193 PRINTS PR00127 Clp protease catalytic subunit P signature 60 80 4.8E-48 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 DB29_02022 60f228299d467e7363c6f5824efdf635 193 PRINTS PR00127 Clp protease catalytic subunit P signature 169 188 4.8E-48 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 DB29_02022 60f228299d467e7363c6f5824efdf635 193 PRINTS PR00127 Clp protease catalytic subunit P signature 20 35 4.8E-48 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 DB29_02022 60f228299d467e7363c6f5824efdf635 193 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 4 193 39.544 T 14-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 DB29_04023 9db32408f65021a1cd7d8c7adceaeb6e 227 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 98 112 2.6E-20 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 DB29_04023 9db32408f65021a1cd7d8c7adceaeb6e 227 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 26 35 2.6E-20 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 DB29_04023 9db32408f65021a1cd7d8c7adceaeb6e 227 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 86 98 2.6E-20 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 DB29_04023 9db32408f65021a1cd7d8c7adceaeb6e 227 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 126 138 2.6E-20 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 DB29_04023 9db32408f65021a1cd7d8c7adceaeb6e 227 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 216 226 2.6E-20 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 DB29_04023 9db32408f65021a1cd7d8c7adceaeb6e 227 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 148 160 2.6E-20 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 DB29_04023 9db32408f65021a1cd7d8c7adceaeb6e 227 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 30 226 3.5E-87 T 14-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 DB29_04023 9db32408f65021a1cd7d8c7adceaeb6e 227 Pfam PF00813 FliP family 30 222 1.6E-80 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 DB29_04023 9db32408f65021a1cd7d8c7adceaeb6e 227 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 155 170 - T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 DB29_04023 9db32408f65021a1cd7d8c7adceaeb6e 227 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 203 215 - T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 DB29_04023 9db32408f65021a1cd7d8c7adceaeb6e 227 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 47 67 9.1E-65 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 DB29_04023 9db32408f65021a1cd7d8c7adceaeb6e 227 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 176 197 9.1E-65 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 DB29_04023 9db32408f65021a1cd7d8c7adceaeb6e 227 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 200 225 9.1E-65 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 DB29_04023 9db32408f65021a1cd7d8c7adceaeb6e 227 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 155 175 9.1E-65 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 DB29_04023 9db32408f65021a1cd7d8c7adceaeb6e 227 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 67 86 9.1E-65 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 DB29_04023 9db32408f65021a1cd7d8c7adceaeb6e 227 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 28 47 9.1E-65 T 14-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 DB29_00875 86a40fd39b25a4747bae012e1601d0cb 273 SUPERFAMILY SSF53474 4 264 9.51E-49 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DB29_00875 86a40fd39b25a4747bae012e1601d0cb 273 Pfam PF12697 Alpha/beta hydrolase family 28 256 6.8E-14 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DB29_00875 86a40fd39b25a4747bae012e1601d0cb 273 PRINTS PR00111 Alpha/beta hydrolase fold signature 95 108 2.1E-5 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DB29_00875 86a40fd39b25a4747bae012e1601d0cb 273 PRINTS PR00111 Alpha/beta hydrolase fold signature 51 66 2.1E-5 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DB29_00875 86a40fd39b25a4747bae012e1601d0cb 273 PRINTS PR00111 Alpha/beta hydrolase fold signature 109 122 2.1E-5 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DB29_00875 86a40fd39b25a4747bae012e1601d0cb 273 Gene3D G3DSA:3.40.50.1820 1 264 3.4E-46 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DB29_01920 89cfc507fc8410c72826bf51ff5c6627 263 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 20 260 1.0E-82 T 14-10-2018 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 Reactome: R-HSA-6793080 DB29_01920 89cfc507fc8410c72826bf51ff5c6627 263 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 22 97 1.7E-22 T 14-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 DB29_01920 89cfc507fc8410c72826bf51ff5c6627 263 Gene3D G3DSA:3.30.1330.30 12 92 1.6E-13 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like DB29_01920 89cfc507fc8410c72826bf51ff5c6627 263 SUPERFAMILY SSF55315 14 94 7.85E-20 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like DB29_01920 89cfc507fc8410c72826bf51ff5c6627 263 Gene3D G3DSA:3.40.1280.10 93 261 1.1E-57 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal DB29_01920 89cfc507fc8410c72826bf51ff5c6627 263 SMART SM00967 22 97 3.2E-20 T 14-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 DB29_01920 89cfc507fc8410c72826bf51ff5c6627 263 SUPERFAMILY SSF75217 85 260 3.4E-49 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases DB29_01920 89cfc507fc8410c72826bf51ff5c6627 263 Pfam PF00588 SpoU rRNA Methylase family 114 254 3.6E-41 T 14-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 DB29_03479 e8d0176be51f3f9f0b5897e3d2a77289 265 Pfam PF07285 Protein of unknown function (DUF1444) 3 264 1.2E-118 T 14-10-2018 IPR010838 Protein of unknown unction DUF1444 DB29_03479 e8d0176be51f3f9f0b5897e3d2a77289 265 Hamap MF_01548 UPF0354 protein . 1 265 46.231 T 14-10-2018 IPR010838 Protein of unknown unction DUF1444 DB29_03450 09375edd39b0306b8b942391598226e6 243 SUPERFAMILY SSF55120 60 231 2.72E-44 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 DB29_03450 09375edd39b0306b8b942391598226e6 243 Gene3D G3DSA:3.30.70.1560 129 212 4.5E-55 T 14-10-2018 DB29_03450 09375edd39b0306b8b942391598226e6 243 SMART SM00363 1 60 2.6E-6 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB29_03450 09375edd39b0306b8b942391598226e6 243 Pfam PF00849 RNA pseudouridylate synthase 62 195 6.3E-20 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 DB29_03450 09375edd39b0306b8b942391598226e6 243 SUPERFAMILY SSF55174 1 56 2.55E-11 T 14-10-2018 DB29_03450 09375edd39b0306b8b942391598226e6 243 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 66 226 5.6E-46 T 14-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 DB29_03450 09375edd39b0306b8b942391598226e6 243 Gene3D G3DSA:3.30.70.580 63 230 4.5E-55 T 14-10-2018 DB29_03450 09375edd39b0306b8b942391598226e6 243 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 100 114 - T 14-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 DB29_03450 09375edd39b0306b8b942391598226e6 243 Gene3D G3DSA:3.10.290.10 1 62 3.0E-17 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 DB29_03450 09375edd39b0306b8b942391598226e6 243 Pfam PF01479 S4 domain 1 44 2.2E-9 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB29_00512 fa8b89600a529b6fec636e542c8d466a 151 Gene3D G3DSA:1.10.10.10 70 150 9.9E-13 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_00512 fa8b89600a529b6fec636e542c8d466a 151 SUPERFAMILY SSF88659 92 148 1.36E-10 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like DB29_00512 fa8b89600a529b6fec636e542c8d466a 151 Gene3D G3DSA:1.10.1740.10 2 69 1.3E-12 T 14-10-2018 DB29_00512 fa8b89600a529b6fec636e542c8d466a 151 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 4 147 1.8E-17 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 DB29_00512 fa8b89600a529b6fec636e542c8d466a 151 SUPERFAMILY SSF88946 4 79 2.79E-13 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 DB29_00512 fa8b89600a529b6fec636e542c8d466a 151 Pfam PF08281 Sigma-70, region 4 95 143 4.7E-10 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DB29_00512 fa8b89600a529b6fec636e542c8d466a 151 Pfam PF04542 Sigma-70 region 2 4 71 1.4E-12 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 DB29_00171 9d442e0ff0b98c24e1b634b72ce0542a 488 SMART SM00155 223 250 0.0035 T 14-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 DB29_00171 9d442e0ff0b98c24e1b634b72ce0542a 488 SMART SM00155 401 428 1.0E-5 T 14-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 DB29_00171 9d442e0ff0b98c24e1b634b72ce0542a 488 Hamap MF_01916 Cardiolipin synthase. 14 488 45.342 T 14-10-2018 IPR030874 Cardiolipin synthase, Firmicutes-type GO:0008808|GO:0032049 DB29_00171 9d442e0ff0b98c24e1b634b72ce0542a 488 Gene3D G3DSA:3.30.870.10 317 463 1.7E-29 T 14-10-2018 DB29_00171 9d442e0ff0b98c24e1b634b72ce0542a 488 Gene3D G3DSA:3.30.870.10 118 312 1.3E-48 T 14-10-2018 DB29_00171 9d442e0ff0b98c24e1b634b72ce0542a 488 PIRSF PIRSF000850 307 401 0.091 T 14-10-2018 DB29_00171 9d442e0ff0b98c24e1b634b72ce0542a 488 PIRSF PIRSF000850 103 195 0.0037 T 14-10-2018 DB29_00171 9d442e0ff0b98c24e1b634b72ce0542a 488 PIRSF PIRSF000850 389 485 0.007 T 14-10-2018 DB29_00171 9d442e0ff0b98c24e1b634b72ce0542a 488 Pfam PF13396 Phospholipase_D-nuclease N-terminal 20 62 1.3E-8 T 14-10-2018 IPR027379 Cardiolipin synthase N-terminal DB29_00171 9d442e0ff0b98c24e1b634b72ce0542a 488 SUPERFAMILY SSF56024 90 318 1.03E-58 T 14-10-2018 DB29_00171 9d442e0ff0b98c24e1b634b72ce0542a 488 SUPERFAMILY SSF56024 275 474 1.3E-53 T 14-10-2018 DB29_00171 9d442e0ff0b98c24e1b634b72ce0542a 488 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 12 488 1.2E-191 T 14-10-2018 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 DB29_00171 9d442e0ff0b98c24e1b634b72ce0542a 488 Pfam PF13091 PLD-like domain 330 455 3.5E-27 T 14-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 DB29_00171 9d442e0ff0b98c24e1b634b72ce0542a 488 Pfam PF13091 PLD-like domain 141 283 3.1E-15 T 14-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 DB29_00565 926dc89067e95da7aa1c46eb38bb77e9 153 SUPERFAMILY SSF55729 2 131 9.69E-26 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase DB29_00565 926dc89067e95da7aa1c46eb38bb77e9 153 Pfam PF13673 Acetyltransferase (GNAT) domain 37 130 2.1E-15 T 14-10-2018 IPR000182 GNAT domain DB29_00565 926dc89067e95da7aa1c46eb38bb77e9 153 Gene3D G3DSA:3.40.630.30 1 151 2.7E-24 T 14-10-2018 DB29_04335 27867c81b5645950e319695476b83d22 122 SMART SM01298 8 122 3.7E-71 T 14-10-2018 IPR014916 Kinase associated protein B DB29_04335 27867c81b5645950e319695476b83d22 122 Gene3D G3DSA:2.30.30.430 1 122 8.0E-49 T 14-10-2018 IPR038080 Kinase associated protein B superfamily DB29_04335 27867c81b5645950e319695476b83d22 122 SUPERFAMILY SSF141251 2 121 6.41E-48 T 14-10-2018 IPR038080 Kinase associated protein B superfamily DB29_04335 27867c81b5645950e319695476b83d22 122 Pfam PF08810 Kinase associated protein B 8 120 2.6E-45 T 14-10-2018 IPR014916 Kinase associated protein B DB29_03092 ebed5fc8bf7e375feb9a51a980c37450 184 Gene3D G3DSA:3.40.50.360 1 177 7.4E-43 T 14-10-2018 IPR029039 Flavoprotein-like superfamily DB29_03092 ebed5fc8bf7e375feb9a51a980c37450 184 Pfam PF02525 Flavodoxin-like fold 1 169 2.6E-20 T 14-10-2018 IPR003680 Flavodoxin-like fold DB29_03092 ebed5fc8bf7e375feb9a51a980c37450 184 SUPERFAMILY SSF52218 1 172 7.14E-39 T 14-10-2018 IPR029039 Flavoprotein-like superfamily DB29_02605 6022b1e54f99dead133cc05c39a6a5bf 378 SUPERFAMILY SSF53901 226 372 1.22E-28 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 DB29_02605 6022b1e54f99dead133cc05c39a6a5bf 378 ProSitePatterns PS00737 Thiolases signature 2. 315 331 - T 14-10-2018 IPR020613 Thiolase, conserved site GO:0016747 DB29_02605 6022b1e54f99dead133cc05c39a6a5bf 378 Pfam PF02803 Thiolase, C-terminal domain 253 343 1.9E-11 T 14-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 DB29_02605 6022b1e54f99dead133cc05c39a6a5bf 378 Pfam PF00108 Thiolase, N-terminal domain 4 220 2.9E-27 T 14-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 DB29_02605 6022b1e54f99dead133cc05c39a6a5bf 378 Gene3D G3DSA:3.40.47.10 3 377 5.0E-118 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 DB29_02605 6022b1e54f99dead133cc05c39a6a5bf 378 SUPERFAMILY SSF53901 1 221 9.75E-42 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 DB29_02605 6022b1e54f99dead133cc05c39a6a5bf 378 PIRSF PIRSF000429 1 373 2.7E-62 T 14-10-2018 IPR002155 Thiolase GO:0016747 DB29_03080 b536dc4f9c3c6d310480839cff5a0599 296 Gene3D G3DSA:3.40.50.620 1 141 1.7E-31 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DB29_03080 b536dc4f9c3c6d310480839cff5a0599 296 Gene3D G3DSA:3.40.50.620 142 295 2.5E-35 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DB29_03080 b536dc4f9c3c6d310480839cff5a0599 296 Pfam PF00582 Universal stress protein family 1 141 1.8E-26 T 14-10-2018 IPR006016 UspA DB29_03080 b536dc4f9c3c6d310480839cff5a0599 296 Pfam PF00582 Universal stress protein family 150 291 3.0E-32 T 14-10-2018 IPR006016 UspA DB29_03080 b536dc4f9c3c6d310480839cff5a0599 296 SUPERFAMILY SSF52402 150 293 3.6E-33 T 14-10-2018 DB29_03080 b536dc4f9c3c6d310480839cff5a0599 296 SUPERFAMILY SSF52402 2 142 3.52E-29 T 14-10-2018 DB29_03080 b536dc4f9c3c6d310480839cff5a0599 296 PRINTS PR01438 Universal stress protein signature 269 291 6.7E-18 T 14-10-2018 IPR006015 Universal stress protein A DB29_03080 b536dc4f9c3c6d310480839cff5a0599 296 PRINTS PR01438 Universal stress protein signature 251 263 6.7E-18 T 14-10-2018 IPR006015 Universal stress protein A DB29_03080 b536dc4f9c3c6d310480839cff5a0599 296 PRINTS PR01438 Universal stress protein signature 150 168 6.7E-18 T 14-10-2018 IPR006015 Universal stress protein A DB29_02679 e6302bdc789f0ae16cdfeaaff0665379 451 Pfam PF00367 phosphotransferase system, EIIB 10 40 2.0E-14 T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 DB29_02679 e6302bdc789f0ae16cdfeaaff0665379 451 Pfam PF02378 Phosphotransferase system, EIIC 108 387 1.3E-33 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 DB29_02679 e6302bdc789f0ae16cdfeaaff0665379 451 Gene3D G3DSA:3.30.1360.60 2 77 8.7E-24 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 DB29_02679 e6302bdc789f0ae16cdfeaaff0665379 451 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 19 36 - T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 DB29_02679 e6302bdc789f0ae16cdfeaaff0665379 451 SUPERFAMILY SSF55604 6 81 4.58E-22 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 DB29_01698 7cf0316f8bd019f1d0bfd0ed4afc5cc8 251 SUPERFAMILY SSF51695 3 247 5.76E-61 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 DB29_01698 7cf0316f8bd019f1d0bfd0ed4afc5cc8 251 Gene3D G3DSA:3.20.20.190 1 248 5.3E-67 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 DB29_01698 7cf0316f8bd019f1d0bfd0ed4afc5cc8 251 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 9 240 1.9E-44 T 14-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 DB29_03612 b1ea01c10e797579f05b8154db059b2f 364 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 3 356 50.904 T 14-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 DB29_03612 b1ea01c10e797579f05b8154db059b2f 364 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 243 262 - T 14-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 DB29_03612 b1ea01c10e797579f05b8154db059b2f 364 SUPERFAMILY SSF53659 2 356 1.44E-124 T 14-10-2018 DB29_03612 b1ea01c10e797579f05b8154db059b2f 364 SMART SM01329 4 352 1.3E-203 T 14-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 DB29_03612 b1ea01c10e797579f05b8154db059b2f 364 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 5 352 1.0E-138 T 14-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 DB29_03612 b1ea01c10e797579f05b8154db059b2f 364 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 5 351 2.3E-155 T 14-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 DB29_03612 b1ea01c10e797579f05b8154db059b2f 364 Gene3D G3DSA:3.40.718.10 1 363 2.5E-153 T 14-10-2018 DB29_03519 c4a7d7765624f90f911034b279293249 228 SUPERFAMILY SSF56281 2 214 1.83E-33 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DB29_03519 c4a7d7765624f90f911034b279293249 228 SMART SM00849 7 194 1.8E-9 T 14-10-2018 IPR001279 Metallo-beta-lactamase DB29_03519 c4a7d7765624f90f911034b279293249 228 Pfam PF13483 Beta-lactamase superfamily domain 2 194 1.7E-24 T 14-10-2018 DB29_03519 c4a7d7765624f90f911034b279293249 228 Hamap MF_00457 UPF0173 metal-dependent hydrolase . 1 228 37.847 T 14-10-2018 IPR022877 Protein of unknown funcion UPF0173 DB29_03519 c4a7d7765624f90f911034b279293249 228 Gene3D G3DSA:3.60.15.10 1 228 2.1E-70 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DB29_01230 975c39e8e7b9ddd4c1c2baa2bcc6473a 289 SMART SM00448 2 115 1.9E-15 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DB29_01230 975c39e8e7b9ddd4c1c2baa2bcc6473a 289 Pfam PF00072 Response regulator receiver domain 5 111 4.5E-20 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DB29_01230 975c39e8e7b9ddd4c1c2baa2bcc6473a 289 Gene3D G3DSA:3.40.50.2300 3 143 1.1E-20 T 14-10-2018 DB29_01230 975c39e8e7b9ddd4c1c2baa2bcc6473a 289 Pfam PF08664 YcbB domain 150 278 3.5E-42 T 14-10-2018 IPR013972 YcbB domain DB29_01230 975c39e8e7b9ddd4c1c2baa2bcc6473a 289 SUPERFAMILY SSF52172 2 131 2.13E-21 T 14-10-2018 IPR011006 CheY-like superfamily DB29_02913 86e81c86bc37cab2259dce50c7d50d9d 360 SUPERFAMILY SSF52540 36 240 5.98E-46 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_02913 86e81c86bc37cab2259dce50c7d50d9d 360 Gene3D G3DSA:3.40.50.300 16 277 2.5E-45 T 14-10-2018 DB29_02913 86e81c86bc37cab2259dce50c7d50d9d 360 SMART SM00382 51 222 4.5E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_02913 86e81c86bc37cab2259dce50c7d50d9d 360 Pfam PF00005 ABC transporter 42 173 8.3E-19 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB29_02913 86e81c86bc37cab2259dce50c7d50d9d 360 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB29_01639 40ccbb9d798b43a0fe8b86e77909c95c 220 SMART SM00382 28 207 0.0039 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_01639 40ccbb9d798b43a0fe8b86e77909c95c 220 SUPERFAMILY SSF52540 17 211 1.36E-37 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_01639 40ccbb9d798b43a0fe8b86e77909c95c 220 Pfam PF00005 ABC transporter 21 158 1.2E-15 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB29_01639 40ccbb9d798b43a0fe8b86e77909c95c 220 Gene3D G3DSA:3.40.50.300 1 220 1.8E-36 T 14-10-2018 DB29_00255 efc4f956c1975db14af6d6067a1a1825 462 Pfam PF10415 Fumarase C C-terminus 407 459 1.1E-26 T 14-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 DB29_00255 efc4f956c1975db14af6d6067a1a1825 462 PRINTS PR00149 Fumarate lyase superfamily signature 316 332 6.1E-34 T 14-10-2018 IPR000362 Fumarate lyase family DB29_00255 efc4f956c1975db14af6d6067a1a1825 462 PRINTS PR00149 Fumarate lyase superfamily signature 179 197 6.1E-34 T 14-10-2018 IPR000362 Fumarate lyase family DB29_00255 efc4f956c1975db14af6d6067a1a1825 462 PRINTS PR00149 Fumarate lyase superfamily signature 133 151 6.1E-34 T 14-10-2018 IPR000362 Fumarate lyase family DB29_00255 efc4f956c1975db14af6d6067a1a1825 462 PRINTS PR00149 Fumarate lyase superfamily signature 270 297 6.1E-34 T 14-10-2018 IPR000362 Fumarate lyase family DB29_00255 efc4f956c1975db14af6d6067a1a1825 462 Pfam PF00206 Lyase 11 341 5.9E-105 T 14-10-2018 IPR022761 Fumarate lyase, N-terminal DB29_00255 efc4f956c1975db14af6d6067a1a1825 462 Gene3D G3DSA:1.10.275.10 4 137 4.5E-50 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal DB29_00255 efc4f956c1975db14af6d6067a1a1825 462 SUPERFAMILY SSF48557 3 461 1.01E-145 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 DB29_00255 efc4f956c1975db14af6d6067a1a1825 462 TIGRFAM TIGR00979 fumC_II: fumarate hydratase, class II 4 460 4.2E-221 T 14-10-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 DB29_00255 efc4f956c1975db14af6d6067a1a1825 462 ProSitePatterns PS00163 Fumarate lyases signature. 316 325 - T 14-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 DB29_00255 efc4f956c1975db14af6d6067a1a1825 462 Gene3D G3DSA:1.20.200.10 138 405 2.1E-110 T 14-10-2018 DB29_00255 efc4f956c1975db14af6d6067a1a1825 462 PRINTS PR00145 Argininosuccinate lyase family signature 174 194 5.0E-5 T 14-10-2018 DB29_00255 efc4f956c1975db14af6d6067a1a1825 462 PRINTS PR00145 Argininosuccinate lyase family signature 316 332 5.0E-5 T 14-10-2018 DB29_00255 efc4f956c1975db14af6d6067a1a1825 462 Gene3D G3DSA:1.10.40.30 407 462 6.8E-29 T 14-10-2018 DB29_00255 efc4f956c1975db14af6d6067a1a1825 462 Hamap MF_00743 Fumarate hydratase class II [fumC]. 3 461 85.393 T 14-10-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 DB29_00580 35a31008afa974b9e41489a8fc017a3b 468 TIGRFAM TIGR01996 PTS-II-BC-sucr: PTS system, sucrose-specific IIBC component 7 459 3.1E-171 T 14-10-2018 IPR010973 Phosphotransferase system, sucrose-specific IIBC component GO:0008982|GO:0009401|GO:0016021 DB29_00580 35a31008afa974b9e41489a8fc017a3b 468 Pfam PF02378 Phosphotransferase system, EIIC 114 405 2.6E-36 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 DB29_00580 35a31008afa974b9e41489a8fc017a3b 468 Pfam PF00367 phosphotransferase system, EIIB 13 45 3.4E-14 T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 DB29_00580 35a31008afa974b9e41489a8fc017a3b 468 Gene3D G3DSA:3.30.1360.60 3 81 2.0E-26 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 DB29_00580 35a31008afa974b9e41489a8fc017a3b 468 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 23 40 - T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 DB29_00580 35a31008afa974b9e41489a8fc017a3b 468 SUPERFAMILY SSF55604 10 82 4.84E-21 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 DB29_04384 6c09027531e65c540042e8954aea5448 215 PIRSF PIRSF000440 1 214 2.0E-86 T 14-10-2018 IPR001707 Chloramphenicol acetyltransferase GO:0008811 DB29_04384 6c09027531e65c540042e8954aea5448 215 SMART SM01059 1 205 2.1E-105 T 14-10-2018 IPR001707 Chloramphenicol acetyltransferase GO:0008811 DB29_04384 6c09027531e65c540042e8954aea5448 215 Gene3D G3DSA:3.30.559.10 2 208 1.4E-60 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 DB29_04384 6c09027531e65c540042e8954aea5448 215 SUPERFAMILY SSF52777 1 210 6.67E-70 T 14-10-2018 DB29_04384 6c09027531e65c540042e8954aea5448 215 Pfam PF00302 Chloramphenicol acetyltransferase 3 205 8.2E-78 T 14-10-2018 IPR001707 Chloramphenicol acetyltransferase GO:0008811 DB29_04384 6c09027531e65c540042e8954aea5448 215 ProDom PD002660 TRANSFERASE CHLORAMPHENICOL ACYLTRANSFERASE ACETYLTRANSFERASE ANTIBIOTIC RESISTANCE PLASMID CAT O-ACETYLTRANSFERASE DIRECT 12 198 3.0E-107 T 14-10-2018 IPR001707 Chloramphenicol acetyltransferase GO:0008811 DB29_02840 efa282db084de2b22be606a5ddf02fb5 488 PRINTS PR01036 Tetracycline resistance protein TetB signature 148 172 1.1E-7 T 14-10-2018 DB29_02840 efa282db084de2b22be606a5ddf02fb5 488 PRINTS PR01036 Tetracycline resistance protein TetB signature 118 138 1.1E-7 T 14-10-2018 DB29_02840 efa282db084de2b22be606a5ddf02fb5 488 PRINTS PR01036 Tetracycline resistance protein TetB signature 27 51 1.1E-7 T 14-10-2018 DB29_02840 efa282db084de2b22be606a5ddf02fb5 488 Gene3D G3DSA:1.20.1250.20 271 487 4.8E-21 T 14-10-2018 DB29_02840 efa282db084de2b22be606a5ddf02fb5 488 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 24 440 1.4E-98 T 14-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 DB29_02840 efa282db084de2b22be606a5ddf02fb5 488 Gene3D G3DSA:1.20.1720.10 24 259 5.6E-37 T 14-10-2018 DB29_02840 efa282db084de2b22be606a5ddf02fb5 488 Pfam PF07690 Major Facilitator Superfamily 29 422 5.7E-49 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DB29_02840 efa282db084de2b22be606a5ddf02fb5 488 SUPERFAMILY SSF103473 16 483 1.31E-63 T 14-10-2018 IPR036259 MFS transporter superfamily DB29_04349 beafe88332bcbaa584f744aa814137d4 756 Gene3D G3DSA:3.40.50.300 28 243 2.6E-49 T 14-10-2018 DB29_04349 beafe88332bcbaa584f744aa814137d4 756 SMART SM00487 51 255 3.1E-32 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DB29_04349 beafe88332bcbaa584f744aa814137d4 756 Pfam PF00271 Helicase conserved C-terminal domain 285 388 7.7E-14 T 14-10-2018 IPR001650 Helicase, C-terminal DB29_04349 beafe88332bcbaa584f744aa814137d4 756 Pfam PF00270 DEAD/DEAH box helicase 57 229 1.4E-27 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 DB29_04349 beafe88332bcbaa584f744aa814137d4 756 Pfam PF09369 Domain of unknown function (DUF1998) 650 729 3.9E-18 T 14-10-2018 IPR018973 DEAD/DEAH-box helicase, putative DB29_04349 beafe88332bcbaa584f744aa814137d4 756 SMART SM00490 302 389 6.4E-13 T 14-10-2018 IPR001650 Helicase, C-terminal DB29_04349 beafe88332bcbaa584f744aa814137d4 756 SUPERFAMILY SSF52540 65 396 7.54E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_04349 beafe88332bcbaa584f744aa814137d4 756 Gene3D G3DSA:3.40.50.300 264 410 7.7E-23 T 14-10-2018 DB29_03376 14f202e15bb5f41707f045da40193306 688 SUPERFAMILY SSF63520 303 404 1.7E-20 T 14-10-2018 IPR036634 PRD domain superfamily GO:0006355 DB29_03376 14f202e15bb5f41707f045da40193306 688 SUPERFAMILY SSF63520 188 292 1.01E-19 T 14-10-2018 IPR036634 PRD domain superfamily GO:0006355 DB29_03376 14f202e15bb5f41707f045da40193306 688 SUPERFAMILY SSF55804 541 671 1.26E-16 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 DB29_03376 14f202e15bb5f41707f045da40193306 688 Gene3D G3DSA:1.10.10.10 1 62 1.1E-6 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_03376 14f202e15bb5f41707f045da40193306 688 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 545 671 3.8E-21 T 14-10-2018 IPR002178 PTS EIIA type-2 domain DB29_03376 14f202e15bb5f41707f045da40193306 688 Pfam PF00874 PRD domain 205 290 1.1E-14 T 14-10-2018 IPR011608 PRD domain GO:0006355 DB29_03376 14f202e15bb5f41707f045da40193306 688 Pfam PF00874 PRD domain 314 400 7.3E-18 T 14-10-2018 IPR011608 PRD domain GO:0006355 DB29_03376 14f202e15bb5f41707f045da40193306 688 Gene3D G3DSA:1.10.1790.10 307 402 1.0E-18 T 14-10-2018 DB29_03376 14f202e15bb5f41707f045da40193306 688 Gene3D G3DSA:1.10.1790.10 195 292 2.7E-17 T 14-10-2018 DB29_03376 14f202e15bb5f41707f045da40193306 688 Gene3D G3DSA:3.40.930.10 535 673 8.0E-14 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 DB29_03376 14f202e15bb5f41707f045da40193306 688 Pfam PF08279 HTH domain 94 145 2.3E-5 T 14-10-2018 IPR013196 Helix-turn-helix, type 11 DB29_03376 14f202e15bb5f41707f045da40193306 688 Pfam PF08279 HTH domain 6 44 1.2E-5 T 14-10-2018 IPR013196 Helix-turn-helix, type 11 DB29_03376 14f202e15bb5f41707f045da40193306 688 SUPERFAMILY SSF52794 412 484 1.26E-9 T 14-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 DB29_03376 14f202e15bb5f41707f045da40193306 688 Gene3D G3DSA:3.40.50.2300 411 531 2.0E-9 T 14-10-2018 DB29_03258 a321677d28b78f0283eff7afa92d69eb 349 SUPERFAMILY SSF48452 153 313 7.25E-17 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DB29_03258 a321677d28b78f0283eff7afa92d69eb 349 Gene3D G3DSA:1.25.40.10 15 134 3.1E-11 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DB29_03258 a321677d28b78f0283eff7afa92d69eb 349 Gene3D G3DSA:1.25.40.10 152 337 1.6E-16 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DB29_03258 a321677d28b78f0283eff7afa92d69eb 349 Pfam PF13432 Tetratricopeptide repeat 154 215 1.0E-5 T 14-10-2018 DB29_03258 a321677d28b78f0283eff7afa92d69eb 349 Pfam PF13176 Tetratricopeptide repeat 219 243 0.0044 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DB29_03258 a321677d28b78f0283eff7afa92d69eb 349 SMART SM00028 283 316 300.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DB29_03258 a321677d28b78f0283eff7afa92d69eb 349 SMART SM00028 183 216 2.3 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DB29_03258 a321677d28b78f0283eff7afa92d69eb 349 SMART SM00028 19 52 71.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DB29_03258 a321677d28b78f0283eff7afa92d69eb 349 SUPERFAMILY SSF48452 21 124 4.07E-14 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DB29_03238 5e343b9605badca3b7c0d9b4791261e7 957 Gene3D G3DSA:1.10.8.280 286 403 2.4E-254 T 14-10-2018 DB29_03238 5e343b9605badca3b7c0d9b4791261e7 957 SMART SM00382 631 906 0.0035 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_03238 5e343b9605badca3b7c0d9b4791261e7 957 SMART SM00382 25 564 9.5 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_03238 5e343b9605badca3b7c0d9b4791261e7 957 Gene3D G3DSA:1.20.1580.10 92 492 2.4E-254 T 14-10-2018 DB29_03238 5e343b9605badca3b7c0d9b4791261e7 957 Gene3D G3DSA:1.20.1580.10 691 828 6.8E-145 T 14-10-2018 DB29_03238 5e343b9605badca3b7c0d9b4791261e7 957 SUPERFAMILY SSF52540 620 912 1.07E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_03238 5e343b9605badca3b7c0d9b4791261e7 957 Gene3D G3DSA:3.40.50.300 613 934 6.8E-145 T 14-10-2018 DB29_03238 5e343b9605badca3b7c0d9b4791261e7 957 Gene3D G3DSA:3.30.190.20 132 241 2.4E-254 T 14-10-2018 DB29_03238 5e343b9605badca3b7c0d9b4791261e7 957 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 5 923 0.0 T 14-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 DB29_03238 5e343b9605badca3b7c0d9b4791261e7 957 ProSitePatterns PS00211 ABC transporters family signature. 828 842 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB29_03238 5e343b9605badca3b7c0d9b4791261e7 957 Gene3D G3DSA:3.40.50.300 7 594 2.4E-254 T 14-10-2018 DB29_03238 5e343b9605badca3b7c0d9b4791261e7 957 SUPERFAMILY SSF52540 13 569 3.37E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_03238 5e343b9605badca3b7c0d9b4791261e7 957 ProSitePatterns PS00211 ABC transporters family signature. 487 501 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB29_03238 5e343b9605badca3b7c0d9b4791261e7 957 Hamap MF_00205 UvrABC system protein A [uvrA]. 3 938 23.25 T 14-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 DB29_00916 884b3deb9b85187754bb4345a10f3b91 337 Pfam PF01032 FecCD transport family 20 335 6.0E-97 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 DB29_00916 884b3deb9b85187754bb4345a10f3b91 337 Gene3D G3DSA:1.10.3470.10 6 337 1.5E-102 T 14-10-2018 IPR037294 ABC transporter, BtuC-like DB29_00916 884b3deb9b85187754bb4345a10f3b91 337 SUPERFAMILY SSF81345 5 335 3.4E-87 T 14-10-2018 IPR037294 ABC transporter, BtuC-like DB29_01726 0a45d094b402eab50505de9f0357fabc 432 Pfam PF13416 Bacterial extracellular solute-binding protein 53 376 4.6E-47 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein DB29_01726 0a45d094b402eab50505de9f0357fabc 432 Gene3D G3DSA:3.40.190.10 38 389 6.4E-86 T 14-10-2018 DB29_01726 0a45d094b402eab50505de9f0357fabc 432 Gene3D G3DSA:3.40.190.10 158 422 6.4E-86 T 14-10-2018 DB29_01726 0a45d094b402eab50505de9f0357fabc 432 SUPERFAMILY SSF53850 34 428 1.81E-72 T 14-10-2018 DB29_00484 7243f03cdbb49159541be19ceb5f101f 350 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 9 340 2.2E-119 T 14-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 DB29_00484 7243f03cdbb49159541be19ceb5f101f 350 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 23 32 - T 14-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 DB29_00484 7243f03cdbb49159541be19ceb5f101f 350 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 7 342 44.507 T 14-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 DB29_00484 7243f03cdbb49159541be19ceb5f101f 350 SUPERFAMILY SSF51726 4 344 1.14E-101 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 DB29_00484 7243f03cdbb49159541be19ceb5f101f 350 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 6 341 6.4E-118 T 14-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 DB29_00484 7243f03cdbb49159541be19ceb5f101f 350 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 140 156 - T 14-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 DB29_00484 7243f03cdbb49159541be19ceb5f101f 350 Gene3D G3DSA:3.20.20.210 1 350 1.1E-139 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 DB29_02781 acb575b38b616a82a70f89a001151fd4 438 Gene3D G3DSA:3.30.70.360 237 351 2.0E-132 T 14-10-2018 DB29_02781 acb575b38b616a82a70f89a001151fd4 438 TIGRFAM TIGR01879 hydantase: amidase, hydantoinase/carbamoylase family 31 433 7.8E-128 T 14-10-2018 IPR010158 Amidase, carbamoylase-type GO:0016813 DB29_02781 acb575b38b616a82a70f89a001151fd4 438 SUPERFAMILY SSF53187 25 433 9.14E-84 T 14-10-2018 DB29_02781 acb575b38b616a82a70f89a001151fd4 438 SUPERFAMILY SSF55031 237 353 8.72E-24 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain DB29_02781 acb575b38b616a82a70f89a001151fd4 438 PIRSF PIRSF001235 27 438 3.4E-151 T 14-10-2018 IPR010158 Amidase, carbamoylase-type GO:0016813 DB29_02781 acb575b38b616a82a70f89a001151fd4 438 Gene3D G3DSA:3.40.630.10 43 427 2.0E-132 T 14-10-2018 DB29_02781 acb575b38b616a82a70f89a001151fd4 438 Pfam PF01546 Peptidase family M20/M25/M40 101 431 2.1E-29 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 DB29_03033 1270e5536b964e86658637b657d98c1a 227 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 47 206 7.9E-26 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DB29_03033 1270e5536b964e86658637b657d98c1a 227 Gene3D G3DSA:1.10.3720.10 24 220 1.3E-30 T 14-10-2018 IPR035906 MetI-like superfamily DB29_03033 1270e5536b964e86658637b657d98c1a 227 SUPERFAMILY SSF161098 22 206 6.15E-33 T 14-10-2018 IPR035906 MetI-like superfamily DB29_00578 b8ab24cb8b4dcfac49eb4adb85c0b2bb 460 Pfam PF08244 Glycosyl hydrolases family 32 C terminal 340 443 2.6E-8 T 14-10-2018 IPR013189 Glycosyl hydrolase family 32, C-terminal DB29_00578 b8ab24cb8b4dcfac49eb4adb85c0b2bb 460 ProSitePatterns PS00609 Glycosyl hydrolases family 32 active site. 13 26 - T 14-10-2018 IPR018053 Glycoside hydrolase, family 32, active site GO:0004553|GO:0005975 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26 DB29_00578 b8ab24cb8b4dcfac49eb4adb85c0b2bb 460 SUPERFAMILY SSF49899 318 444 5.38E-18 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily DB29_00578 b8ab24cb8b4dcfac49eb4adb85c0b2bb 460 SMART SM00640 13 419 8.9E-117 T 14-10-2018 IPR001362 Glycoside hydrolase, family 32 GO:0004553|GO:0005975 DB29_00578 b8ab24cb8b4dcfac49eb4adb85c0b2bb 460 Gene3D G3DSA:2.60.120.560 332 454 5.6E-11 T 14-10-2018 DB29_00578 b8ab24cb8b4dcfac49eb4adb85c0b2bb 460 SUPERFAMILY SSF75005 4 316 3.14E-100 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily DB29_00578 b8ab24cb8b4dcfac49eb4adb85c0b2bb 460 Gene3D G3DSA:2.115.10.20 1 331 4.8E-110 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily DB29_00578 b8ab24cb8b4dcfac49eb4adb85c0b2bb 460 Pfam PF00251 Glycosyl hydrolases family 32 N-terminal domain 13 316 9.7E-99 T 14-10-2018 IPR013148 Glycosyl hydrolase family 32, N-terminal DB29_00578 b8ab24cb8b4dcfac49eb4adb85c0b2bb 460 TIGRFAM TIGR01322 scrB_fam: sucrose-6-phosphate hydrolase 4 429 9.2E-135 T 14-10-2018 IPR006232 Sucrose-6-phosphate hydrolase GO:0004564|GO:0005737|GO:0005975 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26 DB29_02285 ec528cb906607587d5910cbef96a3673 274 Gene3D G3DSA:3.30.930.10 8 274 7.6E-74 T 14-10-2018 DB29_02285 ec528cb906607587d5910cbef96a3673 274 Pfam PF03099 Biotin/lipoate A/B protein ligase family 75 179 2.3E-14 T 14-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 DB29_02285 ec528cb906607587d5910cbef96a3673 274 SUPERFAMILY SSF55681 9 263 8.29E-61 T 14-10-2018 DB29_02285 ec528cb906607587d5910cbef96a3673 274 Hamap MF_02119 Lipoyl-[GcvH]:protein N-lipoyltransferase [lipL]. 6 274 44.025 T 14-10-2018 IPR024897 Octanoyltransferase LipL GO:0009107|GO:0009249|GO:0016415 MetaCyc: PWY-6987 DB29_01752 89c99e2d2aa5e8db7eac9b4ceff07f73 334 SMART SM00354 1 71 5.6E-16 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DB29_01752 89c99e2d2aa5e8db7eac9b4ceff07f73 334 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 14-10-2018 DB29_01752 89c99e2d2aa5e8db7eac9b4ceff07f73 334 SUPERFAMILY SSF47413 1 60 6.33E-16 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DB29_01752 89c99e2d2aa5e8db7eac9b4ceff07f73 334 Gene3D G3DSA:1.10.260.40 1 59 3.6E-19 T 14-10-2018 DB29_01752 89c99e2d2aa5e8db7eac9b4ceff07f73 334 Gene3D G3DSA:3.40.50.2300 76 322 7.5E-56 T 14-10-2018 DB29_01752 89c99e2d2aa5e8db7eac9b4ceff07f73 334 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 46 3.8E-13 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DB29_01752 89c99e2d2aa5e8db7eac9b4ceff07f73 334 Pfam PF13377 Periplasmic binding protein-like domain 172 330 1.9E-33 T 14-10-2018 DB29_01752 89c99e2d2aa5e8db7eac9b4ceff07f73 334 Gene3D G3DSA:3.40.50.2300 162 328 7.5E-56 T 14-10-2018 DB29_01752 89c99e2d2aa5e8db7eac9b4ceff07f73 334 SUPERFAMILY SSF53822 75 332 4.28E-51 T 14-10-2018 IPR028082 Periplasmic binding protein-like I DB29_00056 7cc168f954cac8108827e1575d90f2b6 239 Gene3D G3DSA:3.40.50.150 8 238 1.1E-39 T 14-10-2018 DB29_00056 7cc168f954cac8108827e1575d90f2b6 239 SUPERFAMILY SSF53335 17 181 3.84E-37 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DB29_00056 7cc168f954cac8108827e1575d90f2b6 239 Pfam PF08241 Methyltransferase domain 39 133 1.4E-21 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 DB29_03141 aad5cf17bde68e9486e8fc4592b4450f 272 Pfam PF08282 haloacid dehalogenase-like hydrolase 5 263 6.3E-68 T 14-10-2018 DB29_03141 aad5cf17bde68e9486e8fc4592b4450f 272 ProSitePatterns PS01228 Hypothetical cof family signature 1. 4 15 - T 14-10-2018 DB29_03141 aad5cf17bde68e9486e8fc4592b4450f 272 Gene3D G3DSA:3.40.50.1000 3 263 3.9E-94 T 14-10-2018 IPR023214 HAD superfamily DB29_03141 aad5cf17bde68e9486e8fc4592b4450f 272 Gene3D G3DSA:3.30.1240.10 86 192 3.9E-94 T 14-10-2018 DB29_03141 aad5cf17bde68e9486e8fc4592b4450f 272 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 4 236 5.5E-29 T 14-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 DB29_03141 aad5cf17bde68e9486e8fc4592b4450f 272 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 4 263 6.4E-72 T 14-10-2018 IPR000150 Cof family GO:0016787 DB29_03141 aad5cf17bde68e9486e8fc4592b4450f 272 SUPERFAMILY SSF56784 1 267 8.14E-78 T 14-10-2018 IPR036412 HAD-like superfamily DB29_03141 aad5cf17bde68e9486e8fc4592b4450f 272 ProSitePatterns PS01229 Hypothetical cof family signature 2. 217 239 - T 14-10-2018 DB29_03225 5c88c081756be0a386b87193e0fb9e63 65 ProSitePatterns PS00352 'Cold-shock' domain signature. 14 32 - T 14-10-2018 IPR019844 Cold-shock conserved site DB29_03225 5c88c081756be0a386b87193e0fb9e63 65 Pfam PF00313 'Cold-shock' DNA-binding domain 1 64 3.6E-33 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 DB29_03225 5c88c081756be0a386b87193e0fb9e63 65 SUPERFAMILY SSF50249 1 64 8.43E-25 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DB29_03225 5c88c081756be0a386b87193e0fb9e63 65 PRINTS PR00050 Cold shock protein signature 23 32 2.5E-19 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 DB29_03225 5c88c081756be0a386b87193e0fb9e63 65 PRINTS PR00050 Cold shock protein signature 38 56 2.5E-19 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 DB29_03225 5c88c081756be0a386b87193e0fb9e63 65 PRINTS PR00050 Cold shock protein signature 3 18 2.5E-19 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 DB29_03225 5c88c081756be0a386b87193e0fb9e63 65 SMART SM00357 2 65 7.0E-33 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 DB29_03225 5c88c081756be0a386b87193e0fb9e63 65 Gene3D G3DSA:2.40.50.140 1 64 7.5E-30 T 14-10-2018 DB29_03225 5c88c081756be0a386b87193e0fb9e63 65 PIRSF PIRSF002599 1 65 2.5E-24 T 14-10-2018 IPR012156 Cold shock, CspA GO:0003676 DB29_01509 264bc0738509f410da260ab7758a7990 439 SMART SM00388 215 282 2.1E-10 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DB29_01509 264bc0738509f410da260ab7758a7990 439 SUPERFAMILY SSF47384 202 280 3.53E-14 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DB29_01509 264bc0738509f410da260ab7758a7990 439 Gene3D G3DSA:1.10.287.130 211 285 9.3E-15 T 14-10-2018 DB29_01509 264bc0738509f410da260ab7758a7990 439 Pfam PF00512 His Kinase A (phospho-acceptor) domain 216 280 6.0E-12 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DB29_01509 264bc0738509f410da260ab7758a7990 439 SUPERFAMILY SSF158472 155 204 9.15E-6 T 14-10-2018 DB29_01509 264bc0738509f410da260ab7758a7990 439 Gene3D G3DSA:1.20.1480.50 123 210 4.6E-6 T 14-10-2018 DB29_01509 264bc0738509f410da260ab7758a7990 439 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 327 428 3.0E-19 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DB29_01509 264bc0738509f410da260ab7758a7990 439 Pfam PF00672 HAMP domain 156 203 4.0E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DB29_01509 264bc0738509f410da260ab7758a7990 439 PRINTS PR00344 Bacterial sensor protein C-terminal signature 399 417 1.6E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB29_01509 264bc0738509f410da260ab7758a7990 439 PRINTS PR00344 Bacterial sensor protein C-terminal signature 364 378 1.6E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB29_01509 264bc0738509f410da260ab7758a7990 439 PRINTS PR00344 Bacterial sensor protein C-terminal signature 382 392 1.6E-11 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB29_01509 264bc0738509f410da260ab7758a7990 439 SUPERFAMILY SSF55874 271 436 1.31E-40 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB29_01509 264bc0738509f410da260ab7758a7990 439 Gene3D G3DSA:3.30.565.10 287 438 1.7E-39 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB29_01509 264bc0738509f410da260ab7758a7990 439 SMART SM00387 327 439 8.1E-30 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DB29_01509 264bc0738509f410da260ab7758a7990 439 SMART SM00304 155 207 2.4E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DB29_00942 18ab1e7f86a73492021f65cc133b917b 370 Pfam PF07730 Histidine kinase 173 232 4.3E-15 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 DB29_00942 18ab1e7f86a73492021f65cc133b917b 370 Gene3D G3DSA:3.30.565.10 238 358 6.6E-15 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB29_03639 85281bdfa2eefb148b8d79e5fda31286 344 Gene3D G3DSA:3.30.420.40 149 313 3.2E-133 T 14-10-2018 DB29_03639 85281bdfa2eefb148b8d79e5fda31286 344 SUPERFAMILY SSF53067 5 142 1.64E-39 T 14-10-2018 DB29_03639 85281bdfa2eefb148b8d79e5fda31286 344 Gene3D G3DSA:3.90.640.10 181 255 3.2E-133 T 14-10-2018 DB29_03639 85281bdfa2eefb148b8d79e5fda31286 344 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 42 60 1.1E-61 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 DB29_03639 85281bdfa2eefb148b8d79e5fda31286 344 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 62 85 1.1E-61 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 DB29_03639 85281bdfa2eefb148b8d79e5fda31286 344 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 182 202 1.1E-61 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 DB29_03639 85281bdfa2eefb148b8d79e5fda31286 344 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 296 322 1.1E-61 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 DB29_03639 85281bdfa2eefb148b8d79e5fda31286 344 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 127 146 1.1E-61 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 DB29_03639 85281bdfa2eefb148b8d79e5fda31286 344 Gene3D G3DSA:3.30.420.40 7 323 3.2E-133 T 14-10-2018 DB29_03639 85281bdfa2eefb148b8d79e5fda31286 344 SUPERFAMILY SSF53067 145 328 1.21E-49 T 14-10-2018 DB29_03639 85281bdfa2eefb148b8d79e5fda31286 344 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 4 331 2.1E-161 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 DB29_03639 85281bdfa2eefb148b8d79e5fda31286 344 Pfam PF06723 MreB/Mbl protein 4 329 1.2E-153 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 DB29_00288 582642d3c706a771222ac7215f1f1b30 202 Gene3D G3DSA:1.10.287.990 20 90 1.3E-31 T 14-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DB29_00288 582642d3c706a771222ac7215f1f1b30 202 PIRSF PIRSF000349 1 202 1.7E-86 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DB29_00288 582642d3c706a771222ac7215f1f1b30 202 SUPERFAMILY SSF54719 92 201 9.04E-49 T 14-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DB29_00288 582642d3c706a771222ac7215f1f1b30 202 Gene3D G3DSA:2.40.500.20 91 202 2.4E-52 T 14-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DB29_00288 582642d3c706a771222ac7215f1f1b30 202 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 2 90 4.3E-32 T 14-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DB29_00288 582642d3c706a771222ac7215f1f1b30 202 SUPERFAMILY SSF46609 1 91 1.07E-37 T 14-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DB29_00288 582642d3c706a771222ac7215f1f1b30 202 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 97 197 4.5E-43 T 14-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DB29_00288 582642d3c706a771222ac7215f1f1b30 202 PRINTS PR01703 Manganese superoxide dismutase signature 126 134 1.6E-26 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DB29_00288 582642d3c706a771222ac7215f1f1b30 202 PRINTS PR01703 Manganese superoxide dismutase signature 73 86 1.6E-26 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DB29_00288 582642d3c706a771222ac7215f1f1b30 202 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 1.6E-26 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DB29_00288 582642d3c706a771222ac7215f1f1b30 202 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 1.6E-26 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DB29_00288 582642d3c706a771222ac7215f1f1b30 202 PRINTS PR01703 Manganese superoxide dismutase signature 162 174 1.6E-26 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DB29_00288 582642d3c706a771222ac7215f1f1b30 202 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 164 171 - T 14-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DB29_03404 e3ce855b163847ccea63493ac57b6058 311 Pfam PF01040 UbiA prenyltransferase family 44 289 9.2E-55 T 14-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 DB29_03404 e3ce855b163847ccea63493ac57b6058 311 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 27 302 6.7E-83 T 14-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 DB29_03404 e3ce855b163847ccea63493ac57b6058 311 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 22 306 17.443 T 14-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 DB29_03404 e3ce855b163847ccea63493ac57b6058 311 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 82 104 - T 14-10-2018 IPR030470 UbiA prenyltransferase conserved site DB29_03404 e3ce855b163847ccea63493ac57b6058 311 Gene3D G3DSA:1.10.357.140 34 189 1.4E-17 T 14-10-2018 DB29_03684 c1cb784e5bf9cb4527975c27d439c3ea 122 Gene3D G3DSA:3.40.250.10 1 109 4.7E-27 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily DB29_03684 c1cb784e5bf9cb4527975c27d439c3ea 122 Pfam PF00581 Rhodanese-like domain 22 103 1.6E-14 T 14-10-2018 IPR001763 Rhodanese-like domain DB29_03684 c1cb784e5bf9cb4527975c27d439c3ea 122 SMART SM00450 13 110 4.8E-19 T 14-10-2018 IPR001763 Rhodanese-like domain DB29_03684 c1cb784e5bf9cb4527975c27d439c3ea 122 SUPERFAMILY SSF52821 5 102 1.44E-28 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily DB29_01101 cd2bae45c3a87b768e79f4da4998323f 269 ProSitePatterns PS01006 Formate and nitrite transporters signature 2. 160 170 - T 14-10-2018 IPR024002 Formate/nitrite transporter, conserved site DB29_01101 cd2bae45c3a87b768e79f4da4998323f 269 Pfam PF01226 Formate/nitrite transporter 11 250 5.6E-62 T 14-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 DB29_01101 cd2bae45c3a87b768e79f4da4998323f 269 Gene3D G3DSA:1.20.1080.10 1 264 1.9E-79 T 14-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 DB29_01561 8b7c67efda56e9e9892bd8f1268c5743 108 Pfam PF02255 PTS system, Lactose/Cellobiose specific IIA subunit 9 102 7.0E-37 T 14-10-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 DB29_01561 8b7c67efda56e9e9892bd8f1268c5743 108 Gene3D G3DSA:1.20.58.280 2 106 2.6E-39 T 14-10-2018 DB29_01561 8b7c67efda56e9e9892bd8f1268c5743 108 PIRSF PIRSF000699 1 107 1.0E-39 T 14-10-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 DB29_01561 8b7c67efda56e9e9892bd8f1268c5743 108 SUPERFAMILY SSF46973 5 102 8.89E-37 T 14-10-2018 IPR036542 Phosphotransferase system, lactose/cellobiose-type IIA subunit superfamily GO:0009401 DB29_00585 e0944efa7b6b02dbb88188e4d665b572 777 Gene3D G3DSA:3.20.20.210 21 537 0.0 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 DB29_00585 e0944efa7b6b02dbb88188e4d665b572 777 Gene3D G3DSA:3.20.20.210 402 769 0.0 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 DB29_00585 e0944efa7b6b02dbb88188e4d665b572 777 SUPERFAMILY SSF51726 409 770 8.5E-112 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 DB29_00585 e0944efa7b6b02dbb88188e4d665b572 777 PIRSF PIRSF000382 16 776 0.0 T 14-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 DB29_00585 e0944efa7b6b02dbb88188e4d665b572 777 TIGRFAM TIGR01371 met_syn_B12ind: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 22 770 0.0 T 14-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 DB29_00585 e0944efa7b6b02dbb88188e4d665b572 777 Hamap MF_00172 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [metE]. 17 771 33.7 T 14-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 DB29_00585 e0944efa7b6b02dbb88188e4d665b572 777 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 444 766 1.1E-143 T 14-10-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 DB29_00585 e0944efa7b6b02dbb88188e4d665b572 777 Pfam PF08267 Cobalamin-independent synthase, N-terminal domain 19 329 1.5E-117 T 14-10-2018 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal GO:0003871|GO:0008270|GO:0008652 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 DB29_00585 e0944efa7b6b02dbb88188e4d665b572 777 SUPERFAMILY SSF51726 20 406 2.88E-96 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 DB29_03379 b30e95382e25f2a7efbf0736210c22a6 335 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 161 179 2.0E-21 T 14-10-2018 DB29_03379 b30e95382e25f2a7efbf0736210c22a6 335 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 271 293 2.0E-21 T 14-10-2018 DB29_03379 b30e95382e25f2a7efbf0736210c22a6 335 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 15 34 2.0E-21 T 14-10-2018 DB29_03379 b30e95382e25f2a7efbf0736210c22a6 335 Hamap MF_01685 Ferredoxin--NADP reductase. 12 334 45.392 T 14-10-2018 IPR022890 Ferredoxin--NADP reductase, type 2 GO:0004324|GO:0055114 KEGG: 00195+1.18.1.2|MetaCyc: PWY-101 DB29_03379 b30e95382e25f2a7efbf0736210c22a6 335 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 281 299 1.2E-29 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DB29_03379 b30e95382e25f2a7efbf0736210c22a6 335 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 71 81 1.2E-29 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DB29_03379 b30e95382e25f2a7efbf0736210c22a6 335 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 208 224 1.2E-29 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DB29_03379 b30e95382e25f2a7efbf0736210c22a6 335 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 118 126 1.2E-29 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DB29_03379 b30e95382e25f2a7efbf0736210c22a6 335 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 157 181 1.2E-29 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DB29_03379 b30e95382e25f2a7efbf0736210c22a6 335 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 14 36 1.2E-29 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DB29_03379 b30e95382e25f2a7efbf0736210c22a6 335 Gene3D G3DSA:3.50.50.60 133 252 1.0E-115 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB29_03379 b30e95382e25f2a7efbf0736210c22a6 335 SUPERFAMILY SSF51905 12 316 1.49E-48 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB29_03379 b30e95382e25f2a7efbf0736210c22a6 335 Gene3D G3DSA:3.50.50.60 12 310 1.0E-115 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB29_03379 b30e95382e25f2a7efbf0736210c22a6 335 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 14 305 4.4E-34 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DB29_02569 46592bab810267a8167725ce6e93424d 364 Gene3D G3DSA:2.40.50.140 286 343 9.2E-16 T 14-10-2018 DB29_02569 46592bab810267a8167725ce6e93424d 364 Gene3D G3DSA:2.40.50.940 223 352 9.2E-16 T 14-10-2018 DB29_02569 46592bab810267a8167725ce6e93424d 364 Pfam PF00005 ABC transporter 21 162 6.9E-36 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB29_02569 46592bab810267a8167725ce6e93424d 364 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB29_02569 46592bab810267a8167725ce6e93424d 364 Gene3D G3DSA:3.40.50.300 4 222 3.9E-67 T 14-10-2018 DB29_02569 46592bab810267a8167725ce6e93424d 364 SUPERFAMILY SSF52540 5 244 7.92E-87 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_02569 46592bab810267a8167725ce6e93424d 364 SMART SM00382 29 212 5.6E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_02569 46592bab810267a8167725ce6e93424d 364 Pfam PF08402 TOBE domain 279 347 2.5E-8 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 DB29_02569 46592bab810267a8167725ce6e93424d 364 SUPERFAMILY SSF50331 239 359 2.04E-12 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal DB29_03053 f181f913c6a141bfb755da65abd2f768 249 Gene3D G3DSA:3.40.50.2300 14 139 1.5E-31 T 14-10-2018 DB29_03053 f181f913c6a141bfb755da65abd2f768 249 Gene3D G3DSA:1.10.10.10 140 243 4.1E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_03053 f181f913c6a141bfb755da65abd2f768 249 SMART SM00862 165 240 1.9E-21 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DB29_03053 f181f913c6a141bfb755da65abd2f768 249 Pfam PF00486 Transcriptional regulatory protein, C terminal 167 240 2.7E-22 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DB29_03053 f181f913c6a141bfb755da65abd2f768 249 SUPERFAMILY SSF46894 141 241 2.47E-25 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DB29_03053 f181f913c6a141bfb755da65abd2f768 249 SMART SM00448 15 125 7.2E-35 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DB29_03053 f181f913c6a141bfb755da65abd2f768 249 Pfam PF00072 Response regulator receiver domain 17 125 1.2E-22 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DB29_03053 f181f913c6a141bfb755da65abd2f768 249 SUPERFAMILY SSF52172 11 141 7.54E-37 T 14-10-2018 IPR011006 CheY-like superfamily DB29_01533 b40681830dc331b867d34214b481d27c 310 Pfam PF01370 NAD dependent epimerase/dehydratase family 5 240 4.8E-60 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 DB29_01533 b40681830dc331b867d34214b481d27c 310 PRINTS PR01713 Nucleotide sugar epimerase signature 273 290 3.9E-5 T 14-10-2018 DB29_01533 b40681830dc331b867d34214b481d27c 310 PRINTS PR01713 Nucleotide sugar epimerase signature 211 226 3.9E-5 T 14-10-2018 DB29_01533 b40681830dc331b867d34214b481d27c 310 PRINTS PR01713 Nucleotide sugar epimerase signature 234 249 3.9E-5 T 14-10-2018 DB29_01533 b40681830dc331b867d34214b481d27c 310 Gene3D G3DSA:3.40.50.720 5 294 2.0E-106 T 14-10-2018 DB29_01533 b40681830dc331b867d34214b481d27c 310 SUPERFAMILY SSF51735 3 310 2.2E-92 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_01533 b40681830dc331b867d34214b481d27c 310 Gene3D G3DSA:3.90.25.10 171 306 2.0E-106 T 14-10-2018 DB29_02742 d06dce42f961743dfe6cbeaa432e8c2f 330 Gene3D G3DSA:3.40.50.2300 153 289 1.0E-41 T 14-10-2018 DB29_02742 d06dce42f961743dfe6cbeaa432e8c2f 330 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 7.9E-15 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DB29_02742 d06dce42f961743dfe6cbeaa432e8c2f 330 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 14-10-2018 DB29_02742 d06dce42f961743dfe6cbeaa432e8c2f 330 Pfam PF13377 Periplasmic binding protein-like domain 162 329 4.0E-38 T 14-10-2018 DB29_02742 d06dce42f961743dfe6cbeaa432e8c2f 330 SMART SM00354 1 68 1.8E-9 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DB29_02742 d06dce42f961743dfe6cbeaa432e8c2f 330 Gene3D G3DSA:3.40.50.2300 71 321 1.0E-41 T 14-10-2018 DB29_02742 d06dce42f961743dfe6cbeaa432e8c2f 330 SUPERFAMILY SSF53822 70 316 2.78E-37 T 14-10-2018 IPR028082 Periplasmic binding protein-like I DB29_02742 d06dce42f961743dfe6cbeaa432e8c2f 330 Gene3D G3DSA:1.10.260.40 2 59 2.4E-17 T 14-10-2018 DB29_02742 d06dce42f961743dfe6cbeaa432e8c2f 330 SUPERFAMILY SSF47413 3 57 4.03E-13 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DB29_02588 43ce901d86ef0644a79ad17bdb1beaaf 293 Gene3D G3DSA:1.10.357.10 2 140 3.9E-27 T 14-10-2018 DB29_02588 43ce901d86ef0644a79ad17bdb1beaaf 293 SUPERFAMILY SSF46689 4 58 7.28E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DB29_02588 43ce901d86ef0644a79ad17bdb1beaaf 293 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 7 20 4.3E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DB29_02588 43ce901d86ef0644a79ad17bdb1beaaf 293 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 28 51 4.3E-9 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DB29_02588 43ce901d86ef0644a79ad17bdb1beaaf 293 Pfam PF00440 Bacterial regulatory proteins, tetR family 7 51 2.5E-17 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DB29_02882 2612ebfe6313d03edd98f463cb7f870e 256 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 76 248 3.6E-27 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DB29_02882 2612ebfe6313d03edd98f463cb7f870e 256 SUPERFAMILY SSF161098 55 236 3.79E-33 T 14-10-2018 IPR035906 MetI-like superfamily DB29_02882 2612ebfe6313d03edd98f463cb7f870e 256 Gene3D G3DSA:1.10.3720.10 51 248 3.1E-23 T 14-10-2018 IPR035906 MetI-like superfamily DB29_02343 f003f1c4cba487c54342c9c7187e1f29 71 Pfam PF00137 ATP synthase subunit C 4 67 5.6E-13 T 14-10-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 DB29_02343 f003f1c4cba487c54342c9c7187e1f29 71 Gene3D G3DSA:1.20.20.10 2 69 1.2E-25 T 14-10-2018 IPR038662 F1F0 ATP synthase subunit C superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DB29_02343 f003f1c4cba487c54342c9c7187e1f29 71 PRINTS PR00124 ATP synthase C subunit signature 26 41 2.0E-14 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DB29_02343 f003f1c4cba487c54342c9c7187e1f29 71 PRINTS PR00124 ATP synthase C subunit signature 5 24 2.0E-14 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DB29_02343 f003f1c4cba487c54342c9c7187e1f29 71 PRINTS PR00124 ATP synthase C subunit signature 43 68 2.0E-14 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DB29_02343 f003f1c4cba487c54342c9c7187e1f29 71 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 13 69 7.4E-20 T 14-10-2018 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 DB29_02343 f003f1c4cba487c54342c9c7187e1f29 71 SUPERFAMILY SSF81333 3 69 9.02E-18 T 14-10-2018 IPR035921 F/V-ATP synthase subunit C superfamily DB29_02343 f003f1c4cba487c54342c9c7187e1f29 71 Hamap MF_01396 ATP synthase subunit c [atpH]. 3 68 15.157 T 14-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DB29_02343 f003f1c4cba487c54342c9c7187e1f29 71 ProSitePatterns PS00605 ATP synthase c subunit signature. 33 54 - T 14-10-2018 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 DB29_01695 0aef0c6063daa4a055286aa346f27db5 266 Pfam PF13242 HAD-hyrolase-like 187 259 2.2E-14 T 14-10-2018 DB29_01695 0aef0c6063daa4a055286aa346f27db5 266 Pfam PF13344 Haloacid dehalogenase-like hydrolase 8 107 3.0E-23 T 14-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA DB29_01695 0aef0c6063daa4a055286aa346f27db5 266 Gene3D G3DSA:3.40.50.1000 85 187 1.0E-59 T 14-10-2018 IPR023214 HAD superfamily DB29_01695 0aef0c6063daa4a055286aa346f27db5 266 TIGRFAM TIGR01460 HAD-SF-IIA: HAD hydrolase, family IIA 8 236 9.4E-36 T 14-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA DB29_01695 0aef0c6063daa4a055286aa346f27db5 266 SUPERFAMILY SSF56784 3 261 3.45E-50 T 14-10-2018 IPR036412 HAD-like superfamily DB29_01695 0aef0c6063daa4a055286aa346f27db5 266 Gene3D G3DSA:3.40.50.1000 7 250 1.0E-59 T 14-10-2018 IPR023214 HAD superfamily DB29_03156 ec0ee6f79b9ef569dcad6c0f4f573eaa 211 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 7 203 1.3E-58 T 14-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 DB29_03156 ec0ee6f79b9ef569dcad6c0f4f573eaa 211 SUPERFAMILY SSF51569 3 204 8.97E-64 T 14-10-2018 DB29_03156 ec0ee6f79b9ef569dcad6c0f4f573eaa 211 Gene3D G3DSA:3.20.20.70 2 210 1.1E-74 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DB29_03156 ec0ee6f79b9ef569dcad6c0f4f573eaa 211 Pfam PF01081 KDPG and KHG aldolase 8 196 7.0E-44 T 14-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 DB29_04303 8057ff58a5dc83bb4476e78fd32f16d1 233 Pfam PF07261 Replication initiation and membrane attachment 130 202 1.4E-26 T 14-10-2018 IPR006343 DnaD domain DB29_04303 8057ff58a5dc83bb4476e78fd32f16d1 233 Gene3D G3DSA:1.10.10.630 124 200 6.7E-32 T 14-10-2018 IPR034829 DnaD-like domain superfamily DB29_04303 8057ff58a5dc83bb4476e78fd32f16d1 233 Gene3D G3DSA:1.10.10.10 1 115 1.8E-32 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_04303 8057ff58a5dc83bb4476e78fd32f16d1 233 TIGRFAM TIGR01446 DnaD_dom: DnaD domain protein 129 201 8.8E-26 T 14-10-2018 IPR006343 DnaD domain DB29_04303 8057ff58a5dc83bb4476e78fd32f16d1 233 SUPERFAMILY SSF158499 129 195 8.11E-20 T 14-10-2018 IPR034829 DnaD-like domain superfamily DB29_03772 29ce73fef0781cb863fdc979bcba8e5d 448 Pfam PF02347 Glycine cleavage system P-protein 4 439 4.9E-156 T 14-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 DB29_03772 29ce73fef0781cb863fdc979bcba8e5d 448 SUPERFAMILY SSF53383 4 444 3.99E-122 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DB29_03772 29ce73fef0781cb863fdc979bcba8e5d 448 Gene3D G3DSA:3.40.640.10 85 350 2.7E-163 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DB29_03772 29ce73fef0781cb863fdc979bcba8e5d 448 PIRSF PIRSF006815 4 448 8.5E-187 T 14-10-2018 IPR023010 Probable glycine dehydrogenase (decarboxylating) subunit 1 GO:0004375|GO:0009116 KEGG: 00260+1.4.4.2 DB29_03772 29ce73fef0781cb863fdc979bcba8e5d 448 Hamap MF_00712 Probable glycine dehydrogenase (decarboxylating) subunit 1 [gcvPA]. 4 447 49.471 T 14-10-2018 IPR023010 Probable glycine dehydrogenase (decarboxylating) subunit 1 GO:0004375|GO:0009116 KEGG: 00260+1.4.4.2 DB29_03772 29ce73fef0781cb863fdc979bcba8e5d 448 Gene3D G3DSA:3.90.1150.10 74 443 2.7E-163 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DB29_01107 03b4cc11666e25ddafefbf10b1e58e6e 162 SUPERFAMILY SSF53218 4 161 5.1E-40 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily DB29_01107 03b4cc11666e25ddafefbf10b1e58e6e 162 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 70 83 - T 14-10-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 DB29_01107 03b4cc11666e25ddafefbf10b1e58e6e 162 SMART SM00852 13 155 6.1E-26 T 14-10-2018 IPR001453 MoaB/Mog domain DB29_01107 03b4cc11666e25ddafefbf10b1e58e6e 162 Gene3D G3DSA:3.40.980.10 3 161 2.9E-46 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily DB29_01107 03b4cc11666e25ddafefbf10b1e58e6e 162 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 10 151 7.4E-35 T 14-10-2018 IPR001453 MoaB/Mog domain DB29_01107 03b4cc11666e25ddafefbf10b1e58e6e 162 Pfam PF00994 Probable molybdopterin binding domain 13 155 2.8E-31 T 14-10-2018 IPR001453 MoaB/Mog domain DB29_01107 03b4cc11666e25ddafefbf10b1e58e6e 162 PIRSF PIRSF006443 1 162 4.9E-59 T 14-10-2018 IPR012245 Molybdenum cofactor biosynthesis protein MoaB GO:0006777 DB29_02321 1935c3928bccba9361815eef73c9fbe5 80 ProSitePatterns PS01143 Ribosomal protein L31 signature. 49 70 - T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DB29_02321 1935c3928bccba9361815eef73c9fbe5 80 Gene3D G3DSA:2.30.170.50 1 80 1.0E-26 T 14-10-2018 DB29_02321 1935c3928bccba9361815eef73c9fbe5 80 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 79 2.4E-21 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DB29_02321 1935c3928bccba9361815eef73c9fbe5 80 Hamap MF_00502 50S ribosomal protein L31 type B [rpmE2]. 1 80 25.74 T 14-10-2018 IPR027493 Ribosomal protein L31 type B GO:0003735|GO:0005622|GO:0005840|GO:0006412 DB29_02321 1935c3928bccba9361815eef73c9fbe5 80 PRINTS PR01249 Ribosomal protein L31 signature 60 78 4.6E-20 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DB29_02321 1935c3928bccba9361815eef73c9fbe5 80 PRINTS PR01249 Ribosomal protein L31 signature 2 19 4.6E-20 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DB29_02321 1935c3928bccba9361815eef73c9fbe5 80 PRINTS PR01249 Ribosomal protein L31 signature 45 60 4.6E-20 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DB29_02321 1935c3928bccba9361815eef73c9fbe5 80 SUPERFAMILY SSF143800 1 79 3.69E-24 T 14-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB29_02321 1935c3928bccba9361815eef73c9fbe5 80 Pfam PF01197 Ribosomal protein L31 1 79 3.6E-30 T 14-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DB29_02490 17672ef0f2c23a419eab960cd8c40384 247 Pfam PF00005 ABC transporter 30 162 4.0E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB29_02490 17672ef0f2c23a419eab960cd8c40384 247 SMART SM00382 38 219 1.3E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_02490 17672ef0f2c23a419eab960cd8c40384 247 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB29_02490 17672ef0f2c23a419eab960cd8c40384 247 Gene3D G3DSA:3.40.50.300 5 234 8.1E-63 T 14-10-2018 DB29_02490 17672ef0f2c23a419eab960cd8c40384 247 SUPERFAMILY SSF52540 14 235 1.96E-64 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_00472 17dbff78a78404fa95c188a6cc18b08f 510 SUPERFAMILY SSF56425 214 321 1.79E-26 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 DB29_00472 17dbff78a78404fa95c188a6cc18b08f 510 SUPERFAMILY SSF46977 401 502 1.44E-23 T 14-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 DB29_00472 17dbff78a78404fa95c188a6cc18b08f 510 SUPERFAMILY SSF51905 4 377 5.52E-54 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB29_00472 17dbff78a78404fa95c188a6cc18b08f 510 PIRSF PIRSF000171 1 509 1.4E-35 T 14-10-2018 DB29_00472 17dbff78a78404fa95c188a6cc18b08f 510 Gene3D G3DSA:1.20.58.100 393 492 7.0E-17 T 14-10-2018 DB29_00472 17dbff78a78404fa95c188a6cc18b08f 510 Gene3D G3DSA:3.90.700.10 222 316 5.5E-123 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 DB29_00472 17dbff78a78404fa95c188a6cc18b08f 510 Pfam PF02910 Fumarate reductase flavoprotein C-term 401 502 4.2E-13 T 14-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 DB29_00472 17dbff78a78404fa95c188a6cc18b08f 510 Gene3D G3DSA:3.50.50.60 6 372 5.5E-123 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB29_00472 17dbff78a78404fa95c188a6cc18b08f 510 Pfam PF00890 FAD binding domain 6 361 8.1E-71 T 14-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 DB29_00472 17dbff78a78404fa95c188a6cc18b08f 510 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 3 477 1.4E-143 T 14-10-2018 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342 DB29_00472 17dbff78a78404fa95c188a6cc18b08f 510 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 173 191 4.3E-11 T 14-10-2018 DB29_00472 17dbff78a78404fa95c188a6cc18b08f 510 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 324 346 4.3E-11 T 14-10-2018 DB29_00472 17dbff78a78404fa95c188a6cc18b08f 510 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 4.3E-11 T 14-10-2018 DB29_02986 3b4de131ba95f1bbfc1cd7a33d2cbbfe 537 Gene3D G3DSA:3.40.640.10 201 432 3.4E-58 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DB29_02986 3b4de131ba95f1bbfc1cd7a33d2cbbfe 537 Gene3D G3DSA:3.90.1150.10 192 521 3.4E-58 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DB29_02986 3b4de131ba95f1bbfc1cd7a33d2cbbfe 537 Pfam PF13673 Acetyltransferase (GNAT) domain 41 165 9.9E-7 T 14-10-2018 IPR000182 GNAT domain DB29_02986 3b4de131ba95f1bbfc1cd7a33d2cbbfe 537 SUPERFAMILY SSF55729 5 167 2.3E-23 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase DB29_02986 3b4de131ba95f1bbfc1cd7a33d2cbbfe 537 Gene3D G3DSA:3.40.630.30 5 166 4.5E-17 T 14-10-2018 DB29_02986 3b4de131ba95f1bbfc1cd7a33d2cbbfe 537 SUPERFAMILY SSF53383 188 527 4.08E-55 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DB29_02986 3b4de131ba95f1bbfc1cd7a33d2cbbfe 537 Pfam PF00266 Aminotransferase class-V 211 383 5.1E-12 T 14-10-2018 IPR000192 Aminotransferase class V domain DB29_01374 4b691776a742b8d39eab27c82dc5e212 427 SUPERFAMILY SSF53383 9 414 5.97E-79 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DB29_01374 4b691776a742b8d39eab27c82dc5e212 427 Pfam PF00266 Aminotransferase class-V 84 375 1.1E-22 T 14-10-2018 IPR000192 Aminotransferase class V domain DB29_01374 4b691776a742b8d39eab27c82dc5e212 427 Gene3D G3DSA:3.40.640.10 47 316 1.6E-144 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DB29_01374 4b691776a742b8d39eab27c82dc5e212 427 Hamap MF_01970 Kynureninase [kynU]. 4 411 39.616 T 14-10-2018 IPR010111 Kynureninase GO:0005737|GO:0006569|GO:0009435|GO:0030170|GO:0030429 KEGG: 00380+3.7.1.3|MetaCyc: PWY-5651|MetaCyc: PWY-6309|Reactome: R-HSA-71240 DB29_01374 4b691776a742b8d39eab27c82dc5e212 427 TIGRFAM TIGR01814 kynureninase: kynureninase 13 411 3.2E-129 T 14-10-2018 IPR010111 Kynureninase GO:0005737|GO:0006569|GO:0009435|GO:0030170|GO:0030429 KEGG: 00380+3.7.1.3|MetaCyc: PWY-5651|MetaCyc: PWY-6309|Reactome: R-HSA-71240 DB29_01374 4b691776a742b8d39eab27c82dc5e212 427 PIRSF PIRSF038800 5 419 2.7E-161 T 14-10-2018 IPR010111 Kynureninase GO:0005737|GO:0006569|GO:0009435|GO:0030170|GO:0030429 KEGG: 00380+3.7.1.3|MetaCyc: PWY-5651|MetaCyc: PWY-6309|Reactome: R-HSA-71240 DB29_01374 4b691776a742b8d39eab27c82dc5e212 427 Gene3D G3DSA:3.90.1150.10 16 411 1.6E-144 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DB29_01968 eaa108cb55929ded268afaf9aa1404e8 179 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 9 51 1.1E-10 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 DB29_01968 eaa108cb55929ded268afaf9aa1404e8 179 SUPERFAMILY SSF55781 102 178 5.64E-5 T 14-10-2018 DB29_01968 eaa108cb55929ded268afaf9aa1404e8 179 TIGRFAM TIGR02851 spore_V_T: stage V sporulation protein T 2 178 4.4E-84 T 14-10-2018 IPR014213 Sporulation stage V, protein T DB29_01968 eaa108cb55929ded268afaf9aa1404e8 179 Pfam PF15714 Stage V sporulation protein T C-terminal, transcription factor 54 178 4.2E-43 T 14-10-2018 IPR039472 Sporulation stage V protein T, GAF domain DB29_01968 eaa108cb55929ded268afaf9aa1404e8 179 TIGRFAM TIGR01439 lp_hng_hel_AbrB: transcriptional regulator, AbrB family 8 49 1.2E-15 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 DB29_01968 eaa108cb55929ded268afaf9aa1404e8 179 SMART SM00966 8 52 1.1E-10 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 DB29_01968 eaa108cb55929ded268afaf9aa1404e8 179 Gene3D G3DSA:3.30.450.40 56 179 9.1E-42 T 14-10-2018 IPR029016 GAF-like domain superfamily DB29_01968 eaa108cb55929ded268afaf9aa1404e8 179 SUPERFAMILY SSF89447 1 52 9.03E-15 T 14-10-2018 IPR037914 SpoVT-AbrB domain superfamily DB29_01968 eaa108cb55929ded268afaf9aa1404e8 179 PIRSF PIRSF026579 1 179 1.7E-94 T 14-10-2018 IPR014213 Sporulation stage V, protein T DB29_01968 eaa108cb55929ded268afaf9aa1404e8 179 Gene3D G3DSA:2.10.260.10 1 49 3.8E-24 T 14-10-2018 DB29_04036 1a14b6fe9330fc4a3785fcc8a13749d1 294 SUPERFAMILY SSF54713 55 146 5.36E-23 T 14-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 DB29_04036 1a14b6fe9330fc4a3785fcc8a13749d1 294 Hamap MF_00050 Elongation factor Ts [tsf]. 1 292 83.827 T 14-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 DB29_04036 1a14b6fe9330fc4a3785fcc8a13749d1 294 SUPERFAMILY SSF54713 152 293 1.03E-54 T 14-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 DB29_04036 1a14b6fe9330fc4a3785fcc8a13749d1 294 Gene3D G3DSA:3.30.479.20 156 274 1.4E-45 T 14-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 DB29_04036 1a14b6fe9330fc4a3785fcc8a13749d1 294 Pfam PF00889 Elongation factor TS 70 275 2.4E-79 T 14-10-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0006414 Reactome: R-HSA-5389840 DB29_04036 1a14b6fe9330fc4a3785fcc8a13749d1 294 ProSitePatterns PS01127 Elongation factor Ts signature 2. 74 84 - T 14-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 DB29_04036 1a14b6fe9330fc4a3785fcc8a13749d1 294 Gene3D G3DSA:1.10.8.10 1 55 2.7E-28 T 14-10-2018 DB29_04036 1a14b6fe9330fc4a3785fcc8a13749d1 294 Gene3D G3DSA:1.10.286.20 194 240 1.4E-45 T 14-10-2018 DB29_04036 1a14b6fe9330fc4a3785fcc8a13749d1 294 Gene3D G3DSA:3.30.479.20 56 149 7.7E-26 T 14-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 DB29_04036 1a14b6fe9330fc4a3785fcc8a13749d1 294 SUPERFAMILY SSF46934 1 55 6.13E-21 T 14-10-2018 IPR009060 UBA-like superfamily GO:0005515 DB29_04036 1a14b6fe9330fc4a3785fcc8a13749d1 294 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 294 3.1E-116 T 14-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 DB29_04036 1a14b6fe9330fc4a3785fcc8a13749d1 294 ProSitePatterns PS01126 Elongation factor Ts signature 1. 11 26 - T 14-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 DB29_04019 7f0bf2f4eadc72df4c298dccf4c999f3 329 SUPERFAMILY SSF101801 252 327 1.57E-18 T 14-10-2018 IPR036429 SpoA-like superfamily DB29_04019 7f0bf2f4eadc72df4c298dccf4c999f3 329 Pfam PF02154 Flagellar motor switch protein FliM 39 229 4.1E-66 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 DB29_04019 7f0bf2f4eadc72df4c298dccf4c999f3 329 SUPERFAMILY SSF103039 46 229 1.57E-27 T 14-10-2018 IPR028976 CheC-like superfamily DB29_04019 7f0bf2f4eadc72df4c298dccf4c999f3 329 PIRSF PIRSF002888 1 327 7.6E-107 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 DB29_04019 7f0bf2f4eadc72df4c298dccf4c999f3 329 PRINTS PR00955 Flagellar motor switch protein FliM signature 115 134 5.7E-26 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 DB29_04019 7f0bf2f4eadc72df4c298dccf4c999f3 329 PRINTS PR00955 Flagellar motor switch protein FliM signature 211 229 5.7E-26 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 DB29_04019 7f0bf2f4eadc72df4c298dccf4c999f3 329 PRINTS PR00955 Flagellar motor switch protein FliM signature 90 106 5.7E-26 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 DB29_04019 7f0bf2f4eadc72df4c298dccf4c999f3 329 PRINTS PR00955 Flagellar motor switch protein FliM signature 2 15 5.7E-26 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 DB29_04019 7f0bf2f4eadc72df4c298dccf4c999f3 329 TIGRFAM TIGR01397 fliM_switch: flagellar motor switch protein FliM 3 322 5.7E-108 T 14-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 DB29_04019 7f0bf2f4eadc72df4c298dccf4c999f3 329 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 253 323 7.2E-23 T 14-10-2018 IPR001543 Surface presentation of antigen (SpoA) DB29_04019 7f0bf2f4eadc72df4c298dccf4c999f3 329 Gene3D G3DSA:2.30.330.10 243 327 9.3E-13 T 14-10-2018 IPR036429 SpoA-like superfamily DB29_04019 7f0bf2f4eadc72df4c298dccf4c999f3 329 Gene3D G3DSA:3.40.1550.10 45 231 9.2E-56 T 14-10-2018 IPR028976 CheC-like superfamily DB29_03247 7551a7bc8d6dfbe1a4eca8fa279ee22d 213 Pfam PF01634 ATP phosphoribosyltransferase 52 202 3.9E-47 T 14-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 DB29_03247 7551a7bc8d6dfbe1a4eca8fa279ee22d 213 SUPERFAMILY SSF53850 2 205 3.26E-63 T 14-10-2018 DB29_03247 7551a7bc8d6dfbe1a4eca8fa279ee22d 213 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 3 182 6.9E-60 T 14-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 DB29_03247 7551a7bc8d6dfbe1a4eca8fa279ee22d 213 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 141 162 - T 14-10-2018 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17 DB29_03247 7551a7bc8d6dfbe1a4eca8fa279ee22d 213 Gene3D G3DSA:3.40.190.10 93 174 2.8E-75 T 14-10-2018 DB29_03247 7551a7bc8d6dfbe1a4eca8fa279ee22d 213 Hamap MF_01018 ATP phosphoribosyltransferase [hisG]. 2 206 53.953 T 14-10-2018 IPR024893 ATP phosphoribosyltransferase HisG, short form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17 DB29_03247 7551a7bc8d6dfbe1a4eca8fa279ee22d 213 Gene3D G3DSA:3.40.190.10 4 196 2.8E-75 T 14-10-2018 DB29_04212 bbd936d95c2185dea2d3a69c25459b8b 178 PIRSF PIRSF037785 1 178 8.0E-52 T 14-10-2018 IPR004612 Holliday junction resolvase RecU GO:0005737|GO:0006281|GO:0006310 DB29_04212 bbd936d95c2185dea2d3a69c25459b8b 178 Gene3D G3DSA:3.40.1350.10 8 175 1.0E-52 T 14-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 DB29_04212 bbd936d95c2185dea2d3a69c25459b8b 178 Hamap MF_00130 Holliday junction resolvase RecU [recU]. 1 178 45.123 T 14-10-2018 IPR004612 Holliday junction resolvase RecU GO:0005737|GO:0006281|GO:0006310 DB29_04212 bbd936d95c2185dea2d3a69c25459b8b 178 Pfam PF03838 Recombination protein U 8 170 2.5E-43 T 14-10-2018 IPR004612 Holliday junction resolvase RecU GO:0005737|GO:0006281|GO:0006310 DB29_04212 bbd936d95c2185dea2d3a69c25459b8b 178 SUPERFAMILY SSF52980 10 173 2.95E-43 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 DB29_01563 0a81bd60ac0c5497c4408b1fd3b0d1b2 101 SUPERFAMILY SSF52794 1 100 2.35E-31 T 14-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 DB29_01563 0a81bd60ac0c5497c4408b1fd3b0d1b2 101 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 2 93 2.8E-20 T 14-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 DB29_01563 0a81bd60ac0c5497c4408b1fd3b0d1b2 101 Gene3D G3DSA:3.40.50.2300 1 101 2.7E-32 T 14-10-2018 DB29_00901 ec806b5576b6809dcd0bd10d3f19d8c2 483 SUPERFAMILY SSF75304 1 478 5.36E-169 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 DB29_00901 ec806b5576b6809dcd0bd10d3f19d8c2 483 Gene3D G3DSA:3.90.1300.10 2 482 1.3E-199 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 DB29_00901 ec806b5576b6809dcd0bd10d3f19d8c2 483 TIGRFAM TIGR00132 gatA: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit 12 474 2.1E-201 T 14-10-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 DB29_00901 ec806b5576b6809dcd0bd10d3f19d8c2 483 ProSitePatterns PS00571 Amidases signature. 150 181 - T 14-10-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 DB29_00901 ec806b5576b6809dcd0bd10d3f19d8c2 483 Pfam PF01425 Amidase 24 463 1.6E-165 T 14-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 DB29_00901 ec806b5576b6809dcd0bd10d3f19d8c2 483 Hamap MF_00120 Glutamyl-tRNA(Gln) amidotransferase subunit A [gatA]. 11 475 95.5 T 14-10-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 DB29_01422 15755692b0ab62b2d8f20f2d4bd7ca49 384 Gene3D G3DSA:3.30.360.10 128 337 1.1E-88 T 14-10-2018 DB29_01422 15755692b0ab62b2d8f20f2d4bd7ca49 384 SUPERFAMILY SSF51735 2 157 3.25E-45 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_01422 15755692b0ab62b2d8f20f2d4bd7ca49 384 SUPERFAMILY SSF55347 131 283 4.58E-26 T 14-10-2018 DB29_01422 15755692b0ab62b2d8f20f2d4bd7ca49 384 Gene3D G3DSA:3.40.50.720 5 315 1.1E-88 T 14-10-2018 DB29_01422 15755692b0ab62b2d8f20f2d4bd7ca49 384 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 137 237 1.1E-7 T 14-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 DB29_01422 15755692b0ab62b2d8f20f2d4bd7ca49 384 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 2 121 1.9E-32 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 DB29_03439 38ca07f75a64f0c9bd56d8925956f146 423 Pfam PF01546 Peptidase family M20/M25/M40 71 368 3.6E-6 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 DB29_03439 38ca07f75a64f0c9bd56d8925956f146 423 Gene3D G3DSA:3.30.70.360 192 310 4.9E-50 T 14-10-2018 DB29_03439 38ca07f75a64f0c9bd56d8925956f146 423 SUPERFAMILY SSF53187 3 375 5.59E-37 T 14-10-2018 DB29_03439 38ca07f75a64f0c9bd56d8925956f146 423 SUPERFAMILY SSF55031 192 308 7.15E-16 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain DB29_03439 38ca07f75a64f0c9bd56d8925956f146 423 Gene3D G3DSA:3.40.630.10 12 356 4.9E-50 T 14-10-2018 DB29_00319 1dab59c56edc848e2fd968ab4bc16fd5 693 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 314 330 4.1E-36 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DB29_00319 1dab59c56edc848e2fd968ab4bc16fd5 693 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 49 61 4.1E-36 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DB29_00319 1dab59c56edc848e2fd968ab4bc16fd5 693 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 393 412 4.1E-36 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DB29_00319 1dab59c56edc848e2fd968ab4bc16fd5 693 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 242 257 4.1E-36 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DB29_00319 1dab59c56edc848e2fd968ab4bc16fd5 693 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 6 19 4.1E-36 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DB29_00319 1dab59c56edc848e2fd968ab4bc16fd5 693 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 5 554 5.8E-214 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DB29_00319 1dab59c56edc848e2fd968ab4bc16fd5 693 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 2 689 26.573 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DB29_00319 1dab59c56edc848e2fd968ab4bc16fd5 693 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 3 690 3.5E-236 T 14-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 DB29_00319 1dab59c56edc848e2fd968ab4bc16fd5 693 SUPERFAMILY SSF109604 338 489 2.76E-16 T 14-10-2018 DB29_00319 1dab59c56edc848e2fd968ab4bc16fd5 693 Pfam PF05746 DALR anticodon binding domain 585 681 7.0E-7 T 14-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 DB29_03710 bca81b1796085021d3d96c172321110d 311 SUPERFAMILY SSF53901 1 309 6.46E-69 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 DB29_03710 bca81b1796085021d3d96c172321110d 311 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 220 309 8.6E-37 T 14-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 DB29_03710 bca81b1796085021d3d96c172321110d 311 Gene3D G3DSA:3.40.47.10 2 311 1.9E-129 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 DB29_03710 bca81b1796085021d3d96c172321110d 311 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 2 309 69.78 T 14-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 DB29_03710 bca81b1796085021d3d96c172321110d 311 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 106 184 1.1E-29 T 14-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 DB29_03710 bca81b1796085021d3d96c172321110d 311 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 3 309 2.4E-127 T 14-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 DB29_02465 fa51ceecaba4d41dba1028d99847a4e0 181 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 49 57 - T 14-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 DB29_02465 fa51ceecaba4d41dba1028d99847a4e0 181 Pfam PF01799 [2Fe-2S] binding domain 83 157 7.8E-31 T 14-10-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 DB29_02465 fa51ceecaba4d41dba1028d99847a4e0 181 SUPERFAMILY SSF47741 96 165 4.06E-32 T 14-10-2018 IPR036884 [2Fe-2S]-binding domain superfamily DB29_02465 fa51ceecaba4d41dba1028d99847a4e0 181 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 16 69 5.9E-7 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 DB29_02465 fa51ceecaba4d41dba1028d99847a4e0 181 Gene3D G3DSA:3.10.20.30 3 85 2.2E-27 T 14-10-2018 IPR012675 Beta-grasp domain superfamily DB29_02465 fa51ceecaba4d41dba1028d99847a4e0 181 SUPERFAMILY SSF54292 12 87 1.97E-22 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 DB29_02465 fa51ceecaba4d41dba1028d99847a4e0 181 Gene3D G3DSA:1.10.150.120 86 179 2.1E-33 T 14-10-2018 DB29_02465 fa51ceecaba4d41dba1028d99847a4e0 181 TIGRFAM TIGR03198 pucE: xanthine dehydrogenase E subunit 10 163 2.4E-84 T 14-10-2018 IPR017611 Xanthine dehydrogenase E subunit KEGG: 00230+1.17.1.4|MetaCyc: PWY-5497|MetaCyc: PWY-5695|MetaCyc: PWY-6538|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-6999 DB29_00128 a7aad7140d7f6013bd8c64f9eab3d726 303 Gene3D G3DSA:1.10.1660.10 3 77 3.3E-23 T 14-10-2018 DB29_00128 a7aad7140d7f6013bd8c64f9eab3d726 303 SMART SM00422 9 75 3.2E-15 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DB29_00128 a7aad7140d7f6013bd8c64f9eab3d726 303 Gene3D G3DSA:3.40.50.280 177 286 8.3E-10 T 14-10-2018 DB29_00128 a7aad7140d7f6013bd8c64f9eab3d726 303 Pfam PF13411 MerR HTH family regulatory protein 9 74 1.7E-16 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DB29_00128 a7aad7140d7f6013bd8c64f9eab3d726 303 SUPERFAMILY SSF46955 9 77 3.07E-16 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily DB29_00128 a7aad7140d7f6013bd8c64f9eab3d726 303 SUPERFAMILY SSF52242 177 270 1.96E-5 T 14-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 DB29_00521 b8282ee7170fc066dee69fc33348a8f4 291 Gene3D G3DSA:3.30.2010.10 70 162 3.4E-30 T 14-10-2018 DB29_00521 b8282ee7170fc066dee69fc33348a8f4 291 Hamap MF_00188 Protease HtpX [htpX]. 10 291 25.817 T 14-10-2018 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 DB29_00521 b8282ee7170fc066dee69fc33348a8f4 291 Pfam PF01435 Peptidase family M48 82 291 1.8E-34 T 14-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 DB29_04134 cc4f78b7d1c0b92eb2ca65cdfad5c4d3 739 Gene3D G3DSA:1.10.8.60 649 733 5.7E-9 T 14-10-2018 DB29_04134 cc4f78b7d1c0b92eb2ca65cdfad5c4d3 739 Gene3D G3DSA:1.10.8.60 383 460 8.0E-9 T 14-10-2018 DB29_04134 cc4f78b7d1c0b92eb2ca65cdfad5c4d3 739 SUPERFAMILY SSF52540 204 442 5.6E-36 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_04134 cc4f78b7d1c0b92eb2ca65cdfad5c4d3 739 SMART SM00382 241 379 1.5E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_04134 cc4f78b7d1c0b92eb2ca65cdfad5c4d3 739 SMART SM00382 513 651 1.2E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_04134 cc4f78b7d1c0b92eb2ca65cdfad5c4d3 739 PRINTS PR00819 CbxX/CfqX superfamily signature 476 490 2.5E-44 T 14-10-2018 IPR000641 CbxX/CfqX GO:0005524 DB29_04134 cc4f78b7d1c0b92eb2ca65cdfad5c4d3 739 PRINTS PR00819 CbxX/CfqX superfamily signature 690 702 2.5E-44 T 14-10-2018 IPR000641 CbxX/CfqX GO:0005524 DB29_04134 cc4f78b7d1c0b92eb2ca65cdfad5c4d3 739 PRINTS PR00819 CbxX/CfqX superfamily signature 516 531 2.5E-44 T 14-10-2018 IPR000641 CbxX/CfqX GO:0005524 DB29_04134 cc4f78b7d1c0b92eb2ca65cdfad5c4d3 739 PRINTS PR00819 CbxX/CfqX superfamily signature 598 610 2.5E-44 T 14-10-2018 IPR000641 CbxX/CfqX GO:0005524 DB29_04134 cc4f78b7d1c0b92eb2ca65cdfad5c4d3 739 PRINTS PR00819 CbxX/CfqX superfamily signature 554 568 2.5E-44 T 14-10-2018 IPR000641 CbxX/CfqX GO:0005524 DB29_04134 cc4f78b7d1c0b92eb2ca65cdfad5c4d3 739 PRINTS PR00819 CbxX/CfqX superfamily signature 568 587 2.5E-44 T 14-10-2018 IPR000641 CbxX/CfqX GO:0005524 DB29_04134 cc4f78b7d1c0b92eb2ca65cdfad5c4d3 739 PRINTS PR00819 CbxX/CfqX superfamily signature 636 655 2.5E-44 T 14-10-2018 IPR000641 CbxX/CfqX GO:0005524 DB29_04134 cc4f78b7d1c0b92eb2ca65cdfad5c4d3 739 PRINTS PR00819 CbxX/CfqX superfamily signature 619 636 2.5E-44 T 14-10-2018 IPR000641 CbxX/CfqX GO:0005524 DB29_04134 cc4f78b7d1c0b92eb2ca65cdfad5c4d3 739 SUPERFAMILY SSF52540 476 731 1.26E-36 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_04134 cc4f78b7d1c0b92eb2ca65cdfad5c4d3 739 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 518 647 3.7E-15 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 DB29_04134 cc4f78b7d1c0b92eb2ca65cdfad5c4d3 739 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 245 357 9.5E-17 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 DB29_04134 cc4f78b7d1c0b92eb2ca65cdfad5c4d3 739 Gene3D G3DSA:3.40.50.300 178 379 9.6E-54 T 14-10-2018 DB29_04134 cc4f78b7d1c0b92eb2ca65cdfad5c4d3 739 Gene3D G3DSA:3.40.50.300 461 648 1.2E-55 T 14-10-2018 DB29_03429 d1581f74e2d01e444a9bdf6c65ca8f3c 527 Pfam PF01293 Phosphoenolpyruvate carboxykinase 19 480 3.2E-213 T 14-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 DB29_03429 d1581f74e2d01e444a9bdf6c65ca8f3c 527 ProSitePatterns PS00532 Phosphoenolpyruvate carboxykinase (ATP) signature. 249 264 - T 14-10-2018 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 DB29_03429 d1581f74e2d01e444a9bdf6c65ca8f3c 527 Gene3D G3DSA:3.40.449.10 28 211 2.8E-214 T 14-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 DB29_03429 d1581f74e2d01e444a9bdf6c65ca8f3c 527 Hamap MF_00453 Phosphoenolpyruvate carboxykinase (ATP) [pckA]. 12 526 53.305 T 14-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 DB29_03429 d1581f74e2d01e444a9bdf6c65ca8f3c 527 Gene3D G3DSA:3.90.228.20 212 512 2.8E-214 T 14-10-2018 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 DB29_03429 d1581f74e2d01e444a9bdf6c65ca8f3c 527 SUPERFAMILY SSF53795 212 525 3.79E-131 T 14-10-2018 DB29_03429 d1581f74e2d01e444a9bdf6c65ca8f3c 527 TIGRFAM TIGR00224 pckA: phosphoenolpyruvate carboxykinase (ATP) 17 525 1.1E-220 T 14-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 DB29_03429 d1581f74e2d01e444a9bdf6c65ca8f3c 527 Gene3D G3DSA:2.170.8.10 38 326 2.8E-214 T 14-10-2018 DB29_03429 d1581f74e2d01e444a9bdf6c65ca8f3c 527 PIRSF PIRSF006294 2 526 2.5E-227 T 14-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 DB29_03429 d1581f74e2d01e444a9bdf6c65ca8f3c 527 SUPERFAMILY SSF68923 13 210 8.2E-72 T 14-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 DB29_02283 83c80a588268a72bde0944d726dab9c3 262 SUPERFAMILY SSF52096 1 252 1.31E-65 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily DB29_02283 83c80a588268a72bde0944d726dab9c3 262 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 105 125 - T 14-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 DB29_02283 83c80a588268a72bde0944d726dab9c3 262 Gene3D G3DSA:1.10.12.10 201 247 1.1E-7 T 14-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal DB29_02283 83c80a588268a72bde0944d726dab9c3 262 Gene3D G3DSA:3.90.226.10 1 200 1.9E-58 T 14-10-2018 DB29_02283 83c80a588268a72bde0944d726dab9c3 262 Pfam PF00378 Enoyl-CoA hydratase/isomerase 13 246 1.2E-44 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 DB29_00511 01b9206b54e260fba41939914d180fcc 365 SUPERFAMILY SSF52540 4 243 1.09E-86 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_00511 01b9206b54e260fba41939914d180fcc 365 Pfam PF08402 TOBE domain 281 356 2.6E-6 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 DB29_00511 01b9206b54e260fba41939914d180fcc 365 Gene3D G3DSA:3.40.50.300 1 239 6.7E-74 T 14-10-2018 DB29_00511 01b9206b54e260fba41939914d180fcc 365 Gene3D G3DSA:2.40.50.100 240 362 9.1E-33 T 14-10-2018 DB29_00511 01b9206b54e260fba41939914d180fcc 365 Pfam PF00005 ABC transporter 21 162 1.7E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB29_00511 01b9206b54e260fba41939914d180fcc 365 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB29_00511 01b9206b54e260fba41939914d180fcc 365 SUPERFAMILY SSF50331 237 364 2.02E-26 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal DB29_00511 01b9206b54e260fba41939914d180fcc 365 SMART SM00382 29 212 1.6E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_00511 01b9206b54e260fba41939914d180fcc 365 Gene3D G3DSA:2.40.50.140 303 348 9.1E-33 T 14-10-2018 DB29_03174 5f8a537e389f32807989c7875fefd918 329 SUPERFAMILY SSF47413 5 64 2.36E-19 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DB29_03174 5f8a537e389f32807989c7875fefd918 329 SUPERFAMILY SSF53822 62 317 1.22E-66 T 14-10-2018 IPR028082 Periplasmic binding protein-like I DB29_03174 5f8a537e389f32807989c7875fefd918 329 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 17 27 4.3E-5 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DB29_03174 5f8a537e389f32807989c7875fefd918 329 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 7 17 4.3E-5 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DB29_03174 5f8a537e389f32807989c7875fefd918 329 Gene3D G3DSA:3.40.50.2300 66 308 8.5E-67 T 14-10-2018 DB29_03174 5f8a537e389f32807989c7875fefd918 329 Gene3D G3DSA:3.40.50.2300 159 288 8.5E-67 T 14-10-2018 DB29_03174 5f8a537e389f32807989c7875fefd918 329 SMART SM00354 5 75 3.8E-35 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DB29_03174 5f8a537e389f32807989c7875fefd918 329 Gene3D G3DSA:1.10.260.40 4 64 1.0E-24 T 14-10-2018 DB29_03174 5f8a537e389f32807989c7875fefd918 329 ProSitePatterns PS00356 LacI-type HTH domain signature. 8 26 - T 14-10-2018 DB29_03174 5f8a537e389f32807989c7875fefd918 329 Pfam PF00356 Bacterial regulatory proteins, lacI family 7 52 3.8E-21 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DB29_03174 5f8a537e389f32807989c7875fefd918 329 Pfam PF13377 Periplasmic binding protein-like domain 169 329 1.1E-32 T 14-10-2018 DB29_01276 e3c3da1d5fbfd978beff345d7eb5608f 294 Gene3D G3DSA:1.10.10.60 176 284 4.1E-33 T 14-10-2018 DB29_01276 e3c3da1d5fbfd978beff345d7eb5608f 294 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 263 279 3.8E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DB29_01276 e3c3da1d5fbfd978beff345d7eb5608f 294 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 248 263 3.8E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DB29_01276 e3c3da1d5fbfd978beff345d7eb5608f 294 SUPERFAMILY SSF46689 181 229 1.28E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DB29_01276 e3c3da1d5fbfd978beff345d7eb5608f 294 SMART SM00342 196 279 4.4E-33 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DB29_01276 e3c3da1d5fbfd978beff345d7eb5608f 294 Pfam PF12833 Helix-turn-helix domain 202 280 2.1E-20 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DB29_01276 e3c3da1d5fbfd978beff345d7eb5608f 294 SUPERFAMILY SSF46689 232 282 6.27E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DB29_01276 e3c3da1d5fbfd978beff345d7eb5608f 294 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 233 275 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 DB29_01276 e3c3da1d5fbfd978beff345d7eb5608f 294 SUPERFAMILY SSF51215 15 166 3.53E-11 T 14-10-2018 IPR037923 Transcription regulator HTH-like DB29_01276 e3c3da1d5fbfd978beff345d7eb5608f 294 Pfam PF02311 AraC-like ligand binding domain 36 142 1.6E-7 T 14-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 DB29_02658 600a0b0f71dfd8ed0ccf41019c4ff166 366 SMART SM00028 134 167 28.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DB29_02658 600a0b0f71dfd8ed0ccf41019c4ff166 366 SMART SM00028 94 127 460.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DB29_02658 600a0b0f71dfd8ed0ccf41019c4ff166 366 SMART SM00028 174 207 53.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DB29_02658 600a0b0f71dfd8ed0ccf41019c4ff166 366 SMART SM00028 212 244 260.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DB29_02658 600a0b0f71dfd8ed0ccf41019c4ff166 366 SMART SM00028 251 284 18.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DB29_02658 600a0b0f71dfd8ed0ccf41019c4ff166 366 SUPERFAMILY SSF48452 77 314 1.06E-19 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DB29_02658 600a0b0f71dfd8ed0ccf41019c4ff166 366 Gene3D G3DSA:1.25.40.10 1 362 4.1E-79 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DB29_04176 59bcbf695146b5e092a8157b3c039879 420 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 189 418 5.8E-78 T 14-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 DB29_04176 59bcbf695146b5e092a8157b3c039879 420 Pfam PF02817 e3 binding domain 125 160 3.2E-12 T 14-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 DB29_04176 59bcbf695146b5e092a8157b3c039879 420 Gene3D G3DSA:2.40.50.100 1 116 9.1E-25 T 14-10-2018 DB29_04176 59bcbf695146b5e092a8157b3c039879 420 SUPERFAMILY SSF47005 121 164 6.28E-10 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 DB29_04176 59bcbf695146b5e092a8157b3c039879 420 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 26 55 - T 14-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 DB29_04176 59bcbf695146b5e092a8157b3c039879 420 SUPERFAMILY SSF52777 189 418 3.6E-86 T 14-10-2018 DB29_04176 59bcbf695146b5e092a8157b3c039879 420 SUPERFAMILY SSF51230 2 89 4.71E-26 T 14-10-2018 IPR011053 Single hybrid motif DB29_04176 59bcbf695146b5e092a8157b3c039879 420 Pfam PF00364 Biotin-requiring enzyme 3 75 1.7E-22 T 14-10-2018 IPR000089 Biotin/lipoyl attachment DB29_04176 59bcbf695146b5e092a8157b3c039879 420 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 3 419 7.2E-177 T 14-10-2018 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|Reactome: R-HSA-389661|Reactome: R-HSA-71064|Reactome: R-HSA-71403 DB29_04176 59bcbf695146b5e092a8157b3c039879 420 Gene3D G3DSA:4.10.320.10 119 171 7.9E-14 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 DB29_04176 59bcbf695146b5e092a8157b3c039879 420 Gene3D G3DSA:3.30.559.10 188 419 4.1E-90 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 DB29_01342 75e15aa64f569e45fa26256579d57ed0 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 3.4E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_01342 75e15aa64f569e45fa26256579d57ed0 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 3.4E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_01342 75e15aa64f569e45fa26256579d57ed0 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 3.4E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_01342 75e15aa64f569e45fa26256579d57ed0 257 SUPERFAMILY SSF51735 3 255 9.55E-79 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_01342 75e15aa64f569e45fa26256579d57ed0 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 218 238 4.7E-40 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_01342 75e15aa64f569e45fa26256579d57ed0 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 4.7E-40 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_01342 75e15aa64f569e45fa26256579d57ed0 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 4.7E-40 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_01342 75e15aa64f569e45fa26256579d57ed0 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 4.7E-40 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_01342 75e15aa64f569e45fa26256579d57ed0 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 4.7E-40 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_01342 75e15aa64f569e45fa26256579d57ed0 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 4.7E-40 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_01342 75e15aa64f569e45fa26256579d57ed0 257 Gene3D G3DSA:3.40.50.720 1 257 1.4E-86 T 14-10-2018 DB29_01342 75e15aa64f569e45fa26256579d57ed0 257 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 DB29_01342 75e15aa64f569e45fa26256579d57ed0 257 TIGRFAM TIGR02415 23BDH: acetoin reductases 3 257 2.6E-111 T 14-10-2018 IPR014007 Acetoin reductase GO:0019152|GO:0045150|GO:0055114 KEGG: 00650+1.1.1.304|MetaCyc: PWY-6389 DB29_01342 75e15aa64f569e45fa26256579d57ed0 257 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 9 254 9.6E-59 T 14-10-2018 DB29_03040 e8eba71671365a1075a3d3d9b7c51c2b 83 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 2 80 1.4E-22 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like DB29_03040 e8eba71671365a1075a3d3d9b7c51c2b 83 Pfam PF00381 PTS HPr component phosphorylation site 2 81 1.2E-26 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like DB29_03040 e8eba71671365a1075a3d3d9b7c51c2b 83 Gene3D G3DSA:3.30.1340.10 1 83 1.4E-27 T 14-10-2018 IPR035895 HPr-like superfamily DB29_03040 e8eba71671365a1075a3d3d9b7c51c2b 83 SUPERFAMILY SSF55594 2 82 7.98E-23 T 14-10-2018 IPR035895 HPr-like superfamily DB29_03040 e8eba71671365a1075a3d3d9b7c51c2b 83 PRINTS PR00107 Phosphocarrier protein signature 52 69 5.1E-14 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like DB29_03040 e8eba71671365a1075a3d3d9b7c51c2b 83 PRINTS PR00107 Phosphocarrier protein signature 12 28 5.1E-14 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like DB29_03040 e8eba71671365a1075a3d3d9b7c51c2b 83 PRINTS PR00107 Phosphocarrier protein signature 37 52 5.1E-14 T 14-10-2018 IPR000032 Phosphocarrier protein HPr-like DB29_04142 1b7738aa2e5883ef3c7b1a70fae9f936 104 Pfam PF14179 YppG-like protein 8 102 3.4E-10 T 14-10-2018 IPR025555 YppG-like protein DB29_02265 2499899bb37ab762cab63378df97baa3 401 Pfam PF00909 Ammonium Transporter Family 1 386 8.2E-111 T 14-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 DB29_02265 2499899bb37ab762cab63378df97baa3 401 Gene3D G3DSA:1.10.3430.10 1 400 1.7E-133 T 14-10-2018 IPR029020 Ammonium/urea transporter DB29_02265 2499899bb37ab762cab63378df97baa3 401 ProSitePatterns PS01219 Ammonium transporters signature. 131 156 - T 14-10-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 DB29_02265 2499899bb37ab762cab63378df97baa3 401 SUPERFAMILY SSF111352 1 360 5.23E-102 T 14-10-2018 DB29_02265 2499899bb37ab762cab63378df97baa3 401 TIGRFAM TIGR00836 amt: ammonium transporter 1 386 1.9E-114 T 14-10-2018 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 DB29_02265 2499899bb37ab762cab63378df97baa3 401 PRINTS PR00342 Rhesus blood group protein signature 240 253 3.9E-7 T 14-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 DB29_02265 2499899bb37ab762cab63378df97baa3 401 PRINTS PR00342 Rhesus blood group protein signature 175 193 3.9E-7 T 14-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 DB29_02265 2499899bb37ab762cab63378df97baa3 401 PRINTS PR00342 Rhesus blood group protein signature 27 44 3.9E-7 T 14-10-2018 IPR002229 Blood group Rhesus C/E/D polypeptide GO:0016020 DB29_03241 cc0a79c241d79eb2917dbfb5bd179fe4 310 SUPERFAMILY SSF53795 132 299 2.08E-42 T 14-10-2018 DB29_03241 cc0a79c241d79eb2917dbfb5bd179fe4 310 Pfam PF07475 HPr Serine kinase C-terminal domain 130 298 1.3E-74 T 14-10-2018 IPR011104 HPr kinase/phosphorylase, C-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 DB29_03241 cc0a79c241d79eb2917dbfb5bd179fe4 310 TIGRFAM TIGR00679 hpr-ser: HPr(Ser) kinase/phosphatase 5 301 8.1E-116 T 14-10-2018 IPR003755 HPr(Ser) kinase/phosphorylase GO:0000155|GO:0000160|GO:0005524|GO:0006109 DB29_03241 cc0a79c241d79eb2917dbfb5bd179fe4 310 SUPERFAMILY SSF75138 1 130 1.44E-39 T 14-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily DB29_03241 cc0a79c241d79eb2917dbfb5bd179fe4 310 Hamap MF_01249 HPr kinase/phosphorylase [hprK]. 3 306 41.804 T 14-10-2018 IPR003755 HPr(Ser) kinase/phosphorylase GO:0000155|GO:0000160|GO:0005524|GO:0006109 DB29_03241 cc0a79c241d79eb2917dbfb5bd179fe4 310 Gene3D G3DSA:3.40.50.300 131 309 4.8E-73 T 14-10-2018 DB29_03241 cc0a79c241d79eb2917dbfb5bd179fe4 310 Gene3D G3DSA:3.40.1390.20 3 130 1.2E-42 T 14-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily DB29_03241 cc0a79c241d79eb2917dbfb5bd179fe4 310 Pfam PF02603 HPr Serine kinase N terminus 4 127 7.1E-40 T 14-10-2018 IPR011126 HPr(Ser) kinase/phosphorylase, N-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 DB29_02336 30098584de48ff374180cf1915359990 418 Gene3D G3DSA:3.90.1150.10 7 396 4.2E-189 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DB29_02336 30098584de48ff374180cf1915359990 418 Pfam PF00464 Serine hydroxymethyltransferase 5 385 2.0E-182 T 14-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 DB29_02336 30098584de48ff374180cf1915359990 418 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 219 235 - T 14-10-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 DB29_02336 30098584de48ff374180cf1915359990 418 Gene3D G3DSA:3.40.640.10 34 288 4.2E-189 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DB29_02336 30098584de48ff374180cf1915359990 418 PIRSF PIRSF000412 1 418 6.2E-175 T 14-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 DB29_02336 30098584de48ff374180cf1915359990 418 SUPERFAMILY SSF53383 2 416 1.77E-182 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DB29_02336 30098584de48ff374180cf1915359990 418 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 4 416 53.869 T 14-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 DB29_03636 e3bba47ec4a93bcc7e738c9d8606176a 648 SUPERFAMILY SSF53474 393 648 1.42E-67 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DB29_03636 e3bba47ec4a93bcc7e738c9d8606176a 648 Pfam PF00326 Prolyl oligopeptidase family 440 647 1.9E-54 T 14-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 DB29_03636 e3bba47ec4a93bcc7e738c9d8606176a 648 SUPERFAMILY SSF82171 14 384 1.83E-36 T 14-10-2018 DB29_03636 e3bba47ec4a93bcc7e738c9d8606176a 648 Gene3D G3DSA:2.120.10.30 96 289 2.0E-19 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like DB29_03636 e3bba47ec4a93bcc7e738c9d8606176a 648 Gene3D G3DSA:2.120.10.30 4 95 3.9E-9 T 14-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like DB29_03636 e3bba47ec4a93bcc7e738c9d8606176a 648 Pfam PF07676 WD40-like Beta Propeller Repeat 111 128 0.0017 T 14-10-2018 IPR011659 WD40-like Beta Propeller DB29_03636 e3bba47ec4a93bcc7e738c9d8606176a 648 Pfam PF07676 WD40-like Beta Propeller Repeat 67 92 0.02 T 14-10-2018 IPR011659 WD40-like Beta Propeller DB29_03636 e3bba47ec4a93bcc7e738c9d8606176a 648 Gene3D G3DSA:3.40.50.1820 345 648 5.6E-71 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DB29_00550 a44ac8cbc34035ade118e8b684256410 493 SUPERFAMILY SSF103473 4 471 1.06E-68 T 14-10-2018 IPR036259 MFS transporter superfamily DB29_00550 a44ac8cbc34035ade118e8b684256410 493 Pfam PF07690 Major Facilitator Superfamily 18 408 1.4E-53 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DB29_00550 a44ac8cbc34035ade118e8b684256410 493 Gene3D G3DSA:1.20.1720.10 13 222 2.9E-41 T 14-10-2018 DB29_00550 a44ac8cbc34035ade118e8b684256410 493 PRINTS PR01036 Tetracycline resistance protein TetB signature 107 127 2.0E-10 T 14-10-2018 DB29_00550 a44ac8cbc34035ade118e8b684256410 493 PRINTS PR01036 Tetracycline resistance protein TetB signature 301 325 2.0E-10 T 14-10-2018 DB29_00550 a44ac8cbc34035ade118e8b684256410 493 PRINTS PR01036 Tetracycline resistance protein TetB signature 16 40 2.0E-10 T 14-10-2018 DB29_00550 a44ac8cbc34035ade118e8b684256410 493 PRINTS PR01036 Tetracycline resistance protein TetB signature 137 161 2.0E-10 T 14-10-2018 DB29_00550 a44ac8cbc34035ade118e8b684256410 493 Gene3D G3DSA:1.20.1250.20 260 479 7.9E-24 T 14-10-2018 DB29_00550 a44ac8cbc34035ade118e8b684256410 493 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 14 443 1.2E-124 T 14-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 DB29_00062 e04e46b7ec17f5e62382f745b284edbb 143 Pfam PF13673 Acetyltransferase (GNAT) domain 21 142 1.9E-21 T 14-10-2018 IPR000182 GNAT domain DB29_00062 e04e46b7ec17f5e62382f745b284edbb 143 SUPERFAMILY SSF55729 2 143 1.11E-37 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase DB29_00062 e04e46b7ec17f5e62382f745b284edbb 143 Gene3D G3DSA:3.40.630.30 1 143 3.8E-42 T 14-10-2018 DB29_01996 20ed24f20fb7b36709a1b7a23597fa02 610 SUPERFAMILY SSF52540 151 521 9.46E-32 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_01996 20ed24f20fb7b36709a1b7a23597fa02 610 Gene3D G3DSA:3.40.50.300 344 532 1.5E-33 T 14-10-2018 DB29_01996 20ed24f20fb7b36709a1b7a23597fa02 610 Gene3D G3DSA:3.40.50.300 147 291 4.0E-11 T 14-10-2018 DB29_01996 20ed24f20fb7b36709a1b7a23597fa02 610 Pfam PF01935 Domain of unknown function DUF87 151 293 2.3E-13 T 14-10-2018 IPR002789 Helicase HerA, central domain DB29_00053 2cd8960d7ee6bf3d4497ab1f85d2fbd9 293 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 12 290 3.2E-72 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 DB29_00053 2cd8960d7ee6bf3d4497ab1f85d2fbd9 293 Gene3D G3DSA:3.30.70.1350 210 290 5.0E-15 T 14-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 DB29_00053 2cd8960d7ee6bf3d4497ab1f85d2fbd9 293 Pfam PF16916 Dimerisation domain of Zinc Transporter 213 288 3.0E-18 T 14-10-2018 IPR027470 Cation efflux protein, cytoplasmic domain DB29_00053 2cd8960d7ee6bf3d4497ab1f85d2fbd9 293 Pfam PF01545 Cation efflux family 16 208 2.8E-51 T 14-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 DB29_00053 2cd8960d7ee6bf3d4497ab1f85d2fbd9 293 SUPERFAMILY SSF161111 9 210 2.09E-52 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily DB29_00053 2cd8960d7ee6bf3d4497ab1f85d2fbd9 293 SUPERFAMILY SSF160240 212 289 1.11E-17 T 14-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 DB29_00053 2cd8960d7ee6bf3d4497ab1f85d2fbd9 293 Gene3D G3DSA:1.20.1510.10 12 209 1.1E-53 T 14-10-2018 IPR027469 Cation efflux transmembrane domain superfamily DB29_03467 f28237607b0f0e2a1cc047c339bda278 287 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 5 287 46.225 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 DB29_03467 f28237607b0f0e2a1cc047c339bda278 287 SUPERFAMILY SSF53328 92 287 1.7E-62 T 14-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 DB29_03467 f28237607b0f0e2a1cc047c339bda278 287 Pfam PF01842 ACT domain 9 53 6.5E-8 T 14-10-2018 IPR002912 ACT domain DB29_03467 f28237607b0f0e2a1cc047c339bda278 287 Gene3D G3DSA:3.40.50.170 92 287 2.8E-72 T 14-10-2018 DB29_03467 f28237607b0f0e2a1cc047c339bda278 287 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 9 287 8.5E-125 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 DB29_03467 f28237607b0f0e2a1cc047c339bda278 287 PIRSF PIRSF036480 5 287 1.5E-113 T 14-10-2018 DB29_03467 f28237607b0f0e2a1cc047c339bda278 287 Gene3D G3DSA:3.30.70.260 4 91 6.1E-24 T 14-10-2018 DB29_03467 f28237607b0f0e2a1cc047c339bda278 287 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 115 142 1.4E-61 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 DB29_03467 f28237607b0f0e2a1cc047c339bda278 287 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 239 261 1.4E-61 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 DB29_03467 f28237607b0f0e2a1cc047c339bda278 287 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 10 36 1.4E-61 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 DB29_03467 f28237607b0f0e2a1cc047c339bda278 287 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 93 115 1.4E-61 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 DB29_03467 f28237607b0f0e2a1cc047c339bda278 287 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 43 55 1.4E-61 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 DB29_03467 f28237607b0f0e2a1cc047c339bda278 287 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 261 286 1.4E-61 T 14-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 DB29_03467 f28237607b0f0e2a1cc047c339bda278 287 SUPERFAMILY SSF55021 7 89 3.97E-16 T 14-10-2018 DB29_03467 f28237607b0f0e2a1cc047c339bda278 287 Pfam PF00551 Formyl transferase 92 269 4.9E-43 T 14-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 DB29_00366 ad1fe80e82f42e777a776385988144aa 194 SUPERFAMILY SSF109604 4 185 6.28E-34 T 14-10-2018 DB29_00366 ad1fe80e82f42e777a776385988144aa 194 TIGRFAM TIGR00488 TIGR00488: putative HD superfamily hydrolase 12 182 1.8E-50 T 14-10-2018 IPR005249 Conserved hypothetical protein CHP00488 DB29_00366 ad1fe80e82f42e777a776385988144aa 194 TIGRFAM TIGR00277 HDIG: HDIG domain 21 72 2.8E-9 T 14-10-2018 IPR006675 HDIG domain DB29_00366 ad1fe80e82f42e777a776385988144aa 194 Pfam PF01966 HD domain 20 132 7.5E-14 T 14-10-2018 IPR006674 HD domain DB29_00366 ad1fe80e82f42e777a776385988144aa 194 SMART SM00471 16 143 3.0E-8 T 14-10-2018 IPR003607 HD/PDEase domain DB29_00366 ad1fe80e82f42e777a776385988144aa 194 Gene3D G3DSA:1.10.3210.10 1 188 1.4E-56 T 14-10-2018 DB29_01873 1fffa51593ba55c391a97f397ae6affd 282 SMART SM00382 31 222 2.9E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_01873 1fffa51593ba55c391a97f397ae6affd 282 Pfam PF00005 ABC transporter 22 169 7.7E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB29_01873 1fffa51593ba55c391a97f397ae6affd 282 Gene3D G3DSA:3.40.50.300 2 267 7.7E-70 T 14-10-2018 DB29_01873 1fffa51593ba55c391a97f397ae6affd 282 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB29_01873 1fffa51593ba55c391a97f397ae6affd 282 SUPERFAMILY SSF52540 4 234 1.45E-54 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_00337 fcb92628ec0f681bf6aaa8bfb71707a2 308 Pfam PF02690 Na+/Pi-cotransporter 162 247 1.3E-17 T 14-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 DB29_00337 fcb92628ec0f681bf6aaa8bfb71707a2 308 Pfam PF02690 Na+/Pi-cotransporter 15 149 2.0E-35 T 14-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 DB29_00337 fcb92628ec0f681bf6aaa8bfb71707a2 308 TIGRFAM TIGR00704 NaPi_cotrn_rel: Na/Pi-cotransporter II-related protein 12 305 5.2E-63 T 14-10-2018 IPR004633 Na/Pi-cotransporter II-related/YqeW-like protein GO:0016020 DB29_00652 d6cb9b9437faa8393ebeaac50be386e1 498 Gene3D G3DSA:3.50.50.60 5 337 1.5E-109 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB29_00652 d6cb9b9437faa8393ebeaac50be386e1 498 Gene3D G3DSA:3.40.30.120 379 496 2.6E-18 T 14-10-2018 DB29_00652 d6cb9b9437faa8393ebeaac50be386e1 498 Gene3D G3DSA:3.30.70.2450 176 260 1.5E-109 T 14-10-2018 DB29_00652 d6cb9b9437faa8393ebeaac50be386e1 498 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 286 302 1.7E-39 T 14-10-2018 DB29_00652 d6cb9b9437faa8393ebeaac50be386e1 498 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 4 26 1.7E-39 T 14-10-2018 DB29_00652 d6cb9b9437faa8393ebeaac50be386e1 498 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 271 286 1.7E-39 T 14-10-2018 DB29_00652 d6cb9b9437faa8393ebeaac50be386e1 498 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 147 162 1.7E-39 T 14-10-2018 DB29_00652 d6cb9b9437faa8393ebeaac50be386e1 498 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 304 322 1.7E-39 T 14-10-2018 DB29_00652 d6cb9b9437faa8393ebeaac50be386e1 498 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 322 338 1.7E-39 T 14-10-2018 DB29_00652 d6cb9b9437faa8393ebeaac50be386e1 498 SUPERFAMILY SSF51905 2 349 2.9E-56 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB29_00652 d6cb9b9437faa8393ebeaac50be386e1 498 Pfam PF01494 FAD binding domain 3 336 2.3E-86 T 14-10-2018 IPR002938 FAD-binding domain GO:0071949 DB29_01003 c4f66fae440f773e6ee6293240d7d4a3 282 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 28 269 4.9E-60 T 14-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 DB29_01003 c4f66fae440f773e6ee6293240d7d4a3 282 Gene3D G3DSA:3.10.105.10 213 282 3.5E-56 T 14-10-2018 DB29_01003 c4f66fae440f773e6ee6293240d7d4a3 282 Gene3D G3DSA:3.10.105.10 21 110 8.4E-37 T 14-10-2018 DB29_01003 c4f66fae440f773e6ee6293240d7d4a3 282 Gene3D G3DSA:3.40.190.230 111 128 8.4E-37 T 14-10-2018 DB29_01003 c4f66fae440f773e6ee6293240d7d4a3 282 Gene3D G3DSA:3.40.190.230 132 212 3.5E-56 T 14-10-2018 DB29_01003 c4f66fae440f773e6ee6293240d7d4a3 282 SUPERFAMILY SSF53850 18 282 1.78E-76 T 14-10-2018 DB29_03971 f03199ecd3271f2cf600f3a8c25a51d1 322 Gene3D G3DSA:3.40.718.10 1 322 4.9E-132 T 14-10-2018 DB29_03971 f03199ecd3271f2cf600f3a8c25a51d1 322 Pfam PF02504 Fatty acid synthesis protein 1 311 4.4E-115 T 14-10-2018 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 DB29_03971 f03199ecd3271f2cf600f3a8c25a51d1 322 SUPERFAMILY SSF53659 1 319 2.63E-98 T 14-10-2018 DB29_03971 f03199ecd3271f2cf600f3a8c25a51d1 322 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 322 143.261 T 14-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 DB29_03971 f03199ecd3271f2cf600f3a8c25a51d1 322 PIRSF PIRSF002465 1 321 2.1E-123 T 14-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 DB29_03971 f03199ecd3271f2cf600f3a8c25a51d1 322 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 1 319 3.5E-126 T 14-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 DB29_03949 1a99392069868e7f937f72e4ec8871e6 911 Pfam PF00689 Cation transporting ATPase, C-terminus 723 894 3.9E-54 T 14-10-2018 IPR006068 Cation-transporting P-type ATPase, C-terminal Reactome: R-HSA-936837 DB29_03949 1a99392069868e7f937f72e4ec8871e6 911 Pfam PF00702 haloacid dehalogenase-like hydrolase 322 653 1.1E-23 T 14-10-2018 DB29_03949 1a99392069868e7f937f72e4ec8871e6 911 Pfam PF00690 Cation transporter/ATPase, N-terminus 3 71 1.2E-19 T 14-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 DB29_03949 1a99392069868e7f937f72e4ec8871e6 911 Gene3D G3DSA:2.70.150.10 16 227 0.0 T 14-10-2018 DB29_03949 1a99392069868e7f937f72e4ec8871e6 911 Gene3D G3DSA:3.40.1110.10 334 544 0.0 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 DB29_03949 1a99392069868e7f937f72e4ec8871e6 911 Gene3D G3DSA:3.40.50.1000 321 684 0.0 T 14-10-2018 IPR023214 HAD superfamily DB29_03949 1a99392069868e7f937f72e4ec8871e6 911 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 671 696 3.5E-19 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 DB29_03949 1a99392069868e7f937f72e4ec8871e6 911 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 495 513 3.5E-19 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 DB29_03949 1a99392069868e7f937f72e4ec8871e6 911 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 639 655 3.5E-19 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 DB29_03949 1a99392069868e7f937f72e4ec8871e6 911 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 611 627 3.5E-19 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 DB29_03949 1a99392069868e7f937f72e4ec8871e6 911 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 605 728 1.6E-37 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 DB29_03949 1a99392069868e7f937f72e4ec8871e6 911 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 207 346 3.5E-29 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 DB29_03949 1a99392069868e7f937f72e4ec8871e6 911 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 83 184 3.1E-18 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 DB29_03949 1a99392069868e7f937f72e4ec8871e6 911 SUPERFAMILY SSF81660 331 541 1.92E-57 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 DB29_03949 1a99392069868e7f937f72e4ec8871e6 911 SUPERFAMILY SSF81665 1 889 4.97E-132 T 14-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 DB29_03949 1a99392069868e7f937f72e4ec8871e6 911 SUPERFAMILY SSF56784 322 743 1.2E-65 T 14-10-2018 IPR036412 HAD-like superfamily DB29_03949 1a99392069868e7f937f72e4ec8871e6 911 SMART SM00831 2 76 7.9E-24 T 14-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 DB29_03949 1a99392069868e7f937f72e4ec8871e6 911 Pfam PF00122 E1-E2 ATPase 110 303 3.0E-57 T 14-10-2018 DB29_03949 1a99392069868e7f937f72e4ec8871e6 911 SUPERFAMILY SSF81653 114 223 2.09E-30 T 14-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 DB29_03949 1a99392069868e7f937f72e4ec8871e6 911 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 326 332 - T 14-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 DB29_03949 1a99392069868e7f937f72e4ec8871e6 911 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 559 569 7.2E-42 T 14-10-2018 DB29_03949 1a99392069868e7f937f72e4ec8871e6 911 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 639 658 7.2E-42 T 14-10-2018 DB29_03949 1a99392069868e7f937f72e4ec8871e6 911 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 663 675 7.2E-42 T 14-10-2018 DB29_03949 1a99392069868e7f937f72e4ec8871e6 911 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 324 338 7.2E-42 T 14-10-2018 DB29_03949 1a99392069868e7f937f72e4ec8871e6 911 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 161 175 7.2E-42 T 14-10-2018 DB29_03949 1a99392069868e7f937f72e4ec8871e6 911 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 537 548 7.2E-42 T 14-10-2018 DB29_03949 1a99392069868e7f937f72e4ec8871e6 911 Gene3D G3DSA:1.20.1110.10 54 885 0.0 T 14-10-2018 DB29_01385 2bc014c29eee032c504d96f967d79c08 442 SUPERFAMILY SSF51735 2 165 3.03E-52 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_01385 2bc014c29eee032c504d96f967d79c08 442 Pfam PF02056 Family 4 glycosyl hydrolase 4 184 8.9E-64 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 DB29_01385 2bc014c29eee032c504d96f967d79c08 442 Gene3D G3DSA:3.90.110.10 169 441 1.4E-95 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 DB29_01385 2bc014c29eee032c504d96f967d79c08 442 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 196 410 5.4E-48 T 14-10-2018 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 DB29_01385 2bc014c29eee032c504d96f967d79c08 442 Gene3D G3DSA:3.40.50.720 1 168 6.7E-67 T 14-10-2018 DB29_01385 2bc014c29eee032c504d96f967d79c08 442 PRINTS PR00732 Glycosyl hydrolase family 4 signature 191 203 1.9E-49 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 DB29_01385 2bc014c29eee032c504d96f967d79c08 442 PRINTS PR00732 Glycosyl hydrolase family 4 signature 4 19 1.9E-49 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 DB29_01385 2bc014c29eee032c504d96f967d79c08 442 PRINTS PR00732 Glycosyl hydrolase family 4 signature 75 91 1.9E-49 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 DB29_01385 2bc014c29eee032c504d96f967d79c08 442 PRINTS PR00732 Glycosyl hydrolase family 4 signature 110 130 1.9E-49 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 DB29_01385 2bc014c29eee032c504d96f967d79c08 442 PRINTS PR00732 Glycosyl hydrolase family 4 signature 165 176 1.9E-49 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 DB29_01385 2bc014c29eee032c504d96f967d79c08 442 PRINTS PR00732 Glycosyl hydrolase family 4 signature 96 109 1.9E-49 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 DB29_01385 2bc014c29eee032c504d96f967d79c08 442 PRINTS PR00732 Glycosyl hydrolase family 4 signature 139 156 1.9E-49 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 DB29_01385 2bc014c29eee032c504d96f967d79c08 442 SUPERFAMILY SSF56327 171 435 5.94E-88 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 DB29_01385 2bc014c29eee032c504d96f967d79c08 442 ProSitePatterns PS01324 Glycosyl hydrolases family 4 signature. 139 170 - T 14-10-2018 IPR019802 Glycoside hydrolase, family 4, conserved site GO:0004553|GO:0005975 DB29_03438 9ea571c4a7c6f29121ec7a2ca8e95a2a 814 SUPERFAMILY SSF50677 234 418 1.57E-54 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 DB29_03438 9ea571c4a7c6f29121ec7a2ca8e95a2a 814 Gene3D G3DSA:3.40.50.620 43 579 3.8E-277 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DB29_03438 9ea571c4a7c6f29121ec7a2ca8e95a2a 814 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 229 406 2.4E-68 T 14-10-2018 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 DB29_03438 9ea571c4a7c6f29121ec7a2ca8e95a2a 814 Gene3D G3DSA:2.30.210.10 580 595 3.8E-277 T 14-10-2018 DB29_03438 9ea571c4a7c6f29121ec7a2ca8e95a2a 814 Pfam PF09334 tRNA synthetases class I (M) 49 180 2.3E-18 T 14-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 DB29_03438 9ea571c4a7c6f29121ec7a2ca8e95a2a 814 SUPERFAMILY SSF47323 626 813 3.36E-37 T 14-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 DB29_03438 9ea571c4a7c6f29121ec7a2ca8e95a2a 814 Pfam PF08264 Anticodon-binding domain of tRNA 663 776 1.8E-19 T 14-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 DB29_03438 9ea571c4a7c6f29121ec7a2ca8e95a2a 814 Gene3D G3DSA:3.10.20.590 754 814 3.0E-19 T 14-10-2018 DB29_03438 9ea571c4a7c6f29121ec7a2ca8e95a2a 814 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 14 813 0.0 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 DB29_03438 9ea571c4a7c6f29121ec7a2ca8e95a2a 814 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 12 813 23.189 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 DB29_03438 9ea571c4a7c6f29121ec7a2ca8e95a2a 814 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 420 611 1.2E-19 T 14-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 DB29_03438 9ea571c4a7c6f29121ec7a2ca8e95a2a 814 SUPERFAMILY SSF52374 11 632 1.73E-145 T 14-10-2018 DB29_03438 9ea571c4a7c6f29121ec7a2ca8e95a2a 814 PRINTS PR00985 Leucyl-tRNA synthetase signature 136 153 7.0E-57 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 DB29_03438 9ea571c4a7c6f29121ec7a2ca8e95a2a 814 PRINTS PR00985 Leucyl-tRNA synthetase signature 194 207 7.0E-57 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 DB29_03438 9ea571c4a7c6f29121ec7a2ca8e95a2a 814 PRINTS PR00985 Leucyl-tRNA synthetase signature 223 242 7.0E-57 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 DB29_03438 9ea571c4a7c6f29121ec7a2ca8e95a2a 814 PRINTS PR00985 Leucyl-tRNA synthetase signature 162 178 7.0E-57 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 DB29_03438 9ea571c4a7c6f29121ec7a2ca8e95a2a 814 PRINTS PR00985 Leucyl-tRNA synthetase signature 493 511 7.0E-57 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 DB29_03438 9ea571c4a7c6f29121ec7a2ca8e95a2a 814 PRINTS PR00985 Leucyl-tRNA synthetase signature 532 554 7.0E-57 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 DB29_03438 9ea571c4a7c6f29121ec7a2ca8e95a2a 814 PRINTS PR00985 Leucyl-tRNA synthetase signature 565 575 7.0E-57 T 14-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 DB29_03438 9ea571c4a7c6f29121ec7a2ca8e95a2a 814 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 52 62 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 DB29_03438 9ea571c4a7c6f29121ec7a2ca8e95a2a 814 Gene3D G3DSA:3.90.740.10 236 418 3.8E-277 T 14-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 DB29_03438 9ea571c4a7c6f29121ec7a2ca8e95a2a 814 Gene3D G3DSA:1.10.730.10 607 750 5.0E-47 T 14-10-2018 DB29_00186 b8341953a07d3a48bd2c3bc7d4ba284b 302 Gene3D G3DSA:3.20.20.60 1 302 2.4E-107 T 14-10-2018 DB29_00186 b8341953a07d3a48bd2c3bc7d4ba284b 302 ProSitePatterns PS00161 Isocitrate lyase signature. 127 132 - T 14-10-2018 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824 DB29_00186 b8341953a07d3a48bd2c3bc7d4ba284b 302 SUPERFAMILY SSF51621 10 294 4.93E-95 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 DB29_00186 b8341953a07d3a48bd2c3bc7d4ba284b 302 TIGRFAM TIGR02317 prpB: methylisocitrate lyase 17 295 3.4E-125 T 14-10-2018 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 DB29_00186 b8341953a07d3a48bd2c3bc7d4ba284b 302 Hamap MF_01939 2-methylisocitrate lyase [prpB]. 12 296 46.177 T 14-10-2018 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 DB29_00186 b8341953a07d3a48bd2c3bc7d4ba284b 302 Pfam PF13714 Phosphoenolpyruvate phosphomutase 22 258 5.6E-51 T 14-10-2018 DB29_02463 0c842d4cfdeb5b155c44b19234b8deb8 297 TIGRFAM TIGR03199 pucC: xanthine dehydrogenase C subunit 20 279 1.2E-128 T 14-10-2018 IPR017612 Xanthine dehydrogenase C subunit KEGG: 00230+1.17.1.4|MetaCyc: PWY-5497|MetaCyc: PWY-5695|MetaCyc: PWY-6538|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-6999 DB29_02463 0c842d4cfdeb5b155c44b19234b8deb8 297 Gene3D G3DSA:3.30.465.10 16 173 5.1E-34 T 14-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 DB29_02463 0c842d4cfdeb5b155c44b19234b8deb8 297 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 18 169 3.5E-30 T 14-10-2018 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 DB29_02463 0c842d4cfdeb5b155c44b19234b8deb8 297 SMART SM01092 181 284 8.1E-11 T 14-10-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal DB29_02463 0c842d4cfdeb5b155c44b19234b8deb8 297 SUPERFAMILY SSF56176 18 170 1.09E-29 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 DB29_02463 0c842d4cfdeb5b155c44b19234b8deb8 297 Gene3D G3DSA:3.30.390.50 183 283 3.2E-11 T 14-10-2018 DB29_02463 0c842d4cfdeb5b155c44b19234b8deb8 297 SUPERFAMILY SSF55447 178 286 2.09E-19 T 14-10-2018 IPR036683 CO dehydrogenase flavoprotein, C-terminal domain superfamily DB29_02463 0c842d4cfdeb5b155c44b19234b8deb8 297 Pfam PF03450 CO dehydrogenase flavoprotein C-terminal domain 182 278 1.6E-11 T 14-10-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal DB29_03655 0add98455811973b4679e1d48178a96d 381 SUPERFAMILY SSF51556 55 345 1.92E-44 T 14-10-2018 IPR032466 Metal-dependent hydrolase DB29_03655 0add98455811973b4679e1d48178a96d 381 SUPERFAMILY SSF51338 4 379 5.67E-18 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DB29_03655 0add98455811973b4679e1d48178a96d 381 Gene3D G3DSA:3.20.20.140 56 341 7.9E-117 T 14-10-2018 DB29_03655 0add98455811973b4679e1d48178a96d 381 Pfam PF01979 Amidohydrolase family 52 377 3.5E-15 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 DB29_03655 0add98455811973b4679e1d48178a96d 381 Gene3D G3DSA:2.30.40.10 6 375 7.9E-117 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DB29_04027 cb33ef572d5a8d8d932503bc199cf0f9 678 PIRSF PIRSF005419 1 678 1.7E-260 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 DB29_04027 cb33ef572d5a8d8d932503bc199cf0f9 678 Gene3D G3DSA:1.10.8.540 486 575 3.0E-32 T 14-10-2018 DB29_04027 cb33ef572d5a8d8d932503bc199cf0f9 678 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 140 158 4.0E-56 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 DB29_04027 cb33ef572d5a8d8d932503bc199cf0f9 678 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 221 235 4.0E-56 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 DB29_04027 cb33ef572d5a8d8d932503bc199cf0f9 678 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 121 137 4.0E-56 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 DB29_04027 cb33ef572d5a8d8d932503bc199cf0f9 678 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 170 187 4.0E-56 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 DB29_04027 cb33ef572d5a8d8d932503bc199cf0f9 678 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 59 78 4.0E-56 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 DB29_04027 cb33ef572d5a8d8d932503bc199cf0f9 678 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 22 35 4.0E-56 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 DB29_04027 cb33ef572d5a8d8d932503bc199cf0f9 678 Gene3D G3DSA:1.10.490.80 577 675 6.8E-26 T 14-10-2018 DB29_04027 cb33ef572d5a8d8d932503bc199cf0f9 678 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 4 675 6.0E-270 T 14-10-2018 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 DB29_04027 cb33ef572d5a8d8d932503bc199cf0f9 678 Gene3D G3DSA:3.40.30.60 342 485 5.0E-55 T 14-10-2018 DB29_04027 cb33ef572d5a8d8d932503bc199cf0f9 678 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 126 149 - T 14-10-2018 IPR025505 FHIPEP conserved site DB29_04027 cb33ef572d5a8d8d932503bc199cf0f9 678 Pfam PF00771 FHIPEP family 15 667 2.9E-273 T 14-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 DB29_02520 8ed31e2a48279c940cfbc94056bf92bb 299 SUPERFAMILY SSF53448 1 286 1.22E-95 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DB29_02520 8ed31e2a48279c940cfbc94056bf92bb 299 Gene3D G3DSA:3.90.550.10 1 291 1.8E-87 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DB29_02520 8ed31e2a48279c940cfbc94056bf92bb 299 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 2 286 1.1E-157 T 14-10-2018 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|KEGG: 00525+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 DB29_02520 8ed31e2a48279c940cfbc94056bf92bb 299 Pfam PF00483 Nucleotidyl transferase 2 238 9.4E-74 T 14-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 DB29_02226 d06b04433a5ece95f6736d180e7d1a6a 657 SMART SM00283 381 656 6.9E-80 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DB29_02226 d06b04433a5ece95f6736d180e7d1a6a 657 Gene3D G3DSA:1.10.287.950 350 656 3.3E-71 T 14-10-2018 DB29_02226 d06b04433a5ece95f6736d180e7d1a6a 657 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 429 608 1.7E-38 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DB29_02226 d06b04433a5ece95f6736d180e7d1a6a 657 Pfam PF02743 Cache domain 38 260 9.9E-18 T 14-10-2018 IPR033479 Double Cache domain 1 DB29_02226 d06b04433a5ece95f6736d180e7d1a6a 657 Gene3D G3DSA:3.30.450.20 32 172 2.1E-6 T 14-10-2018 DB29_02226 d06b04433a5ece95f6736d180e7d1a6a 657 Gene3D G3DSA:1.10.8.500 297 349 1.9E-7 T 14-10-2018 DB29_02226 d06b04433a5ece95f6736d180e7d1a6a 657 Gene3D G3DSA:3.30.450.20 173 266 2.7E-8 T 14-10-2018 DB29_02226 d06b04433a5ece95f6736d180e7d1a6a 657 Pfam PF00672 HAMP domain 298 347 6.7E-8 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DB29_02226 d06b04433a5ece95f6736d180e7d1a6a 657 SMART SM00304 298 352 1.0E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DB29_02226 d06b04433a5ece95f6736d180e7d1a6a 657 SMART SM00304 474 534 36.0 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DB29_02226 d06b04433a5ece95f6736d180e7d1a6a 657 SUPERFAMILY SSF58104 328 656 9.94E-69 T 14-10-2018 DB29_02339 0b5342cf89387ee6870b63954651edb4 759 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 190 200 - T 14-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site DB29_02339 0b5342cf89387ee6870b63954651edb4 759 Gene3D G3DSA:3.50.30.30 319 431 2.0E-21 T 14-10-2018 DB29_02339 0b5342cf89387ee6870b63954651edb4 759 Gene3D G3DSA:3.40.50.200 432 551 3.4E-33 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 DB29_02339 0b5342cf89387ee6870b63954651edb4 759 Pfam PF00082 Subtilase family 141 536 2.0E-69 T 14-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 DB29_02339 0b5342cf89387ee6870b63954651edb4 759 PRINTS PR00723 Subtilisin serine protease family (S8) signature 186 199 3.8E-21 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related DB29_02339 0b5342cf89387ee6870b63954651edb4 759 PRINTS PR00723 Subtilisin serine protease family (S8) signature 481 497 3.8E-21 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related DB29_02339 0b5342cf89387ee6870b63954651edb4 759 PRINTS PR00723 Subtilisin serine protease family (S8) signature 141 160 3.8E-21 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related DB29_02339 0b5342cf89387ee6870b63954651edb4 759 Pfam PF02225 PA domain 340 419 7.8E-12 T 14-10-2018 IPR003137 PA domain DB29_02339 0b5342cf89387ee6870b63954651edb4 759 Gene3D G3DSA:3.40.50.200 134 318 7.2E-53 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 DB29_02339 0b5342cf89387ee6870b63954651edb4 759 SUPERFAMILY SSF52743 138 545 1.23E-83 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 DB29_02339 0b5342cf89387ee6870b63954651edb4 759 SUPERFAMILY SSF52025 337 425 2.49E-16 T 14-10-2018 DB29_02339 0b5342cf89387ee6870b63954651edb4 759 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 482 492 - T 14-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site DB29_02339 0b5342cf89387ee6870b63954651edb4 759 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 146 157 - T 14-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site DB29_03219 750fd95de4ccc04aa2769c26f6df02c2 79 TIGRFAM TIGR00202 csrA: carbon storage regulator 2 60 2.0E-28 T 14-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 DB29_03219 750fd95de4ccc04aa2769c26f6df02c2 79 Gene3D G3DSA:3.30.70.1680 1 63 5.5E-28 T 14-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 DB29_03219 750fd95de4ccc04aa2769c26f6df02c2 79 SUPERFAMILY SSF117130 2 55 4.18E-19 T 14-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 DB29_03219 750fd95de4ccc04aa2769c26f6df02c2 79 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 49 2.0E-20 T 14-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 DB29_03219 750fd95de4ccc04aa2769c26f6df02c2 79 Hamap MF_00167 Translational regulator CsrA [csrA]. 1 69 17.377 T 14-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 DB29_03219 750fd95de4ccc04aa2769c26f6df02c2 79 Pfam PF02599 Global regulator protein family 2 53 9.0E-25 T 14-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 DB29_01004 ac6b12a3d3231a6b875904a00d250833 188 Gene3D G3DSA:1.10.10.10 10 94 1.7E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_01004 ac6b12a3d3231a6b875904a00d250833 188 PIRSF PIRSF006707 1 188 1.1E-58 T 14-10-2018 IPR026282 DNA-binding protein, MJ1563 type DB29_01004 ac6b12a3d3231a6b875904a00d250833 188 SUPERFAMILY SSF46785 10 159 1.84E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_01675 e6bcaa2a3af9bec195dbf036b9326a31 278 SUPERFAMILY SSF46689 164 215 2.83E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DB29_01675 e6bcaa2a3af9bec195dbf036b9326a31 278 Gene3D G3DSA:2.60.120.10 5 82 3.0E-10 T 14-10-2018 IPR014710 RmlC-like jelly roll fold DB29_01675 e6bcaa2a3af9bec195dbf036b9326a31 278 SUPERFAMILY SSF51215 24 152 1.57E-11 T 14-10-2018 IPR037923 Transcription regulator HTH-like DB29_01675 e6bcaa2a3af9bec195dbf036b9326a31 278 SUPERFAMILY SSF46689 217 269 1.33E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DB29_01675 e6bcaa2a3af9bec195dbf036b9326a31 278 Gene3D G3DSA:1.10.10.60 160 269 2.6E-28 T 14-10-2018 DB29_01675 e6bcaa2a3af9bec195dbf036b9326a31 278 SMART SM00342 180 264 7.5E-26 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DB29_01675 e6bcaa2a3af9bec195dbf036b9326a31 278 Pfam PF02311 AraC-like ligand binding domain 11 138 1.6E-7 T 14-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 DB29_01675 e6bcaa2a3af9bec195dbf036b9326a31 278 Pfam PF12833 Helix-turn-helix domain 187 263 1.2E-22 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DB29_01675 e6bcaa2a3af9bec195dbf036b9326a31 278 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 218 260 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 DB29_02794 6fd4d32987368fcd5687067392e68879 407 Gene3D G3DSA:3.40.190.10 49 362 8.3E-98 T 14-10-2018 DB29_02794 6fd4d32987368fcd5687067392e68879 407 SUPERFAMILY SSF53850 18 404 7.41E-95 T 14-10-2018 DB29_02794 6fd4d32987368fcd5687067392e68879 407 Pfam PF13416 Bacterial extracellular solute-binding protein 49 347 3.9E-46 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein DB29_02794 6fd4d32987368fcd5687067392e68879 407 Gene3D G3DSA:3.40.190.10 145 398 8.3E-98 T 14-10-2018 DB29_03400 4b3bb59390a7d2491c991ddd796ab6de 451 Gene3D G3DSA:3.40.50.10490 44 225 1.5E-76 T 14-10-2018 DB29_03400 4b3bb59390a7d2491c991ddd796ab6de 451 Gene3D G3DSA:3.40.50.10490 226 417 2.3E-80 T 14-10-2018 DB29_03400 4b3bb59390a7d2491c991ddd796ab6de 451 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 1 435 26.717 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DB29_03400 4b3bb59390a7d2491c991ddd796ab6de 451 SUPERFAMILY SSF53697 4 447 1.25E-144 T 14-10-2018 DB29_03400 4b3bb59390a7d2491c991ddd796ab6de 451 Gene3D G3DSA:3.40.50.10490 1 43 4.0E-15 T 14-10-2018 DB29_03400 4b3bb59390a7d2491c991ddd796ab6de 451 PRINTS PR00662 Glucose-6-phosphate isomerase signature 273 294 3.8E-29 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DB29_03400 4b3bb59390a7d2491c991ddd796ab6de 451 PRINTS PR00662 Glucose-6-phosphate isomerase signature 394 408 3.8E-29 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DB29_03400 4b3bb59390a7d2491c991ddd796ab6de 451 PRINTS PR00662 Glucose-6-phosphate isomerase signature 408 421 3.8E-29 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DB29_03400 4b3bb59390a7d2491c991ddd796ab6de 451 PRINTS PR00662 Glucose-6-phosphate isomerase signature 376 394 3.8E-29 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DB29_03400 4b3bb59390a7d2491c991ddd796ab6de 451 PRINTS PR00662 Glucose-6-phosphate isomerase signature 76 95 3.8E-29 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DB29_03400 4b3bb59390a7d2491c991ddd796ab6de 451 PRINTS PR00662 Glucose-6-phosphate isomerase signature 198 216 3.8E-29 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DB29_03400 4b3bb59390a7d2491c991ddd796ab6de 451 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 408 425 - T 14-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DB29_03400 4b3bb59390a7d2491c991ddd796ab6de 451 Pfam PF00342 Phosphoglucose isomerase 76 426 1.0E-25 T 14-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DB29_03400 4b3bb59390a7d2491c991ddd796ab6de 451 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 202 215 - T 14-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DB29_02291 ab12257ab2c24acc797ab745ad644a8b 63 SUPERFAMILY SSF55331 2 60 9.82E-20 T 14-10-2018 IPR014347 Tautomerase/MIF superfamily DB29_02291 ab12257ab2c24acc797ab745ad644a8b 63 Pfam PF01361 Tautomerase enzyme 2 60 4.9E-24 T 14-10-2018 IPR004370 4-oxalocrotonate tautomerase GO:0006725|GO:0016853 DB29_02291 ab12257ab2c24acc797ab745ad644a8b 63 Gene3D G3DSA:3.30.429.10 1 60 1.1E-26 T 14-10-2018 IPR014347 Tautomerase/MIF superfamily DB29_02291 ab12257ab2c24acc797ab745ad644a8b 63 TIGRFAM TIGR00013 taut: 4-oxalocrotonate tautomerase family enzyme 1 61 1.1E-25 T 14-10-2018 IPR018191 4-oxalocrotonate tautomerase, Pseudomonas-type GO:0006725|GO:0016853 DB29_01396 53ace40a1bf83098f856483aae19421c 281 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 177 196 2.4E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_01396 53ace40a1bf83098f856483aae19421c 281 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 165 2.4E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_01396 53ace40a1bf83098f856483aae19421c 281 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 86 97 2.4E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_01396 53ace40a1bf83098f856483aae19421c 281 Pfam PF00106 short chain dehydrogenase 11 218 2.5E-50 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_01396 53ace40a1bf83098f856483aae19421c 281 Gene3D G3DSA:3.40.50.720 3 281 2.5E-84 T 14-10-2018 DB29_01396 53ace40a1bf83098f856483aae19421c 281 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 164 192 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 DB29_01396 53ace40a1bf83098f856483aae19421c 281 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 196 1.4E-30 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_01396 53ace40a1bf83098f856483aae19421c 281 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 238 258 1.4E-30 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_01396 53ace40a1bf83098f856483aae19421c 281 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 12 29 1.4E-30 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_01396 53ace40a1bf83098f856483aae19421c 281 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 86 97 1.4E-30 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_01396 53ace40a1bf83098f856483aae19421c 281 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 167 1.4E-30 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_01396 53ace40a1bf83098f856483aae19421c 281 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 198 215 1.4E-30 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_01396 53ace40a1bf83098f856483aae19421c 281 SUPERFAMILY SSF51735 9 277 1.58E-74 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_02449 8b7fa8a9ec17957de1b9a936fab05bc4 583 SUPERFAMILY SSF49785 7 178 1.15E-50 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily DB29_02449 8b7fa8a9ec17957de1b9a936fab05bc4 583 SUPERFAMILY SSF51445 282 579 4.74E-62 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily DB29_02449 8b7fa8a9ec17957de1b9a936fab05bc4 583 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 21 175 5.8E-22 T 14-10-2018 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 DB29_02449 8b7fa8a9ec17957de1b9a936fab05bc4 583 SUPERFAMILY SSF49303 181 286 7.48E-10 T 14-10-2018 IPR036156 Beta-Galactosidase/glucuronidase domain superfamily DB29_02449 8b7fa8a9ec17957de1b9a936fab05bc4 583 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 289 579 7.2E-13 T 14-10-2018 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 DB29_02449 8b7fa8a9ec17957de1b9a936fab05bc4 583 Pfam PF00703 Glycosyl hydrolases family 2 181 285 1.6E-11 T 14-10-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-2206292|Reactome: R-HSA-6798695 DB29_02449 8b7fa8a9ec17957de1b9a936fab05bc4 583 Gene3D G3DSA:3.20.20.80 287 582 5.0E-61 T 14-10-2018 DB29_02449 8b7fa8a9ec17957de1b9a936fab05bc4 583 Gene3D G3DSA:2.60.120.260 4 178 1.8E-47 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily DB29_02449 8b7fa8a9ec17957de1b9a936fab05bc4 583 Gene3D G3DSA:2.60.40.10 180 285 9.7E-9 T 14-10-2018 IPR013783 Immunoglobulin-like fold DB29_03729 7cafc6780f33a17f8b1523ada3fad9e2 410 Pfam PF13200 Putative glycosyl hydrolase domain 79 401 1.9E-124 T 14-10-2018 IPR025275 Putative glycosyl hydrolase domain DUF4015 DB29_03729 7cafc6780f33a17f8b1523ada3fad9e2 410 SUPERFAMILY SSF51445 90 405 1.05E-6 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily DB29_02247 154301e9a8511f72a3f98b6b015f1c1e 137 SUPERFAMILY SSF158442 10 133 4.84E-30 T 14-10-2018 IPR023380 DsbB-like superfamily DB29_02247 154301e9a8511f72a3f98b6b015f1c1e 137 PIRSF PIRSF036659 1 137 1.7E-53 T 14-10-2018 IPR012187 Disulphide bond formation protein BdbC DB29_02247 154301e9a8511f72a3f98b6b015f1c1e 137 Gene3D G3DSA:1.20.1550.10 2 118 1.8E-12 T 14-10-2018 IPR023380 DsbB-like superfamily DB29_02247 154301e9a8511f72a3f98b6b015f1c1e 137 Pfam PF02600 Disulfide bond formation protein DsbB 9 110 1.2E-12 T 14-10-2018 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 DB29_02247 154301e9a8511f72a3f98b6b015f1c1e 137 Hamap MF_00287 Probable disulfide formation protein [bdbC]. 2 137 22.727 T 14-10-2018 IPR012187 Disulphide bond formation protein BdbC DB29_02875 ea2b4520e2f2f5f428213034c131725b 299 SUPERFAMILY SSF46785 1 110 2.1E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_02875 ea2b4520e2f2f5f428213034c131725b 299 Gene3D G3DSA:3.40.190.290 92 291 2.1E-39 T 14-10-2018 DB29_02875 ea2b4520e2f2f5f428213034c131725b 299 Pfam PF03466 LysR substrate binding domain 87 258 2.0E-38 T 14-10-2018 IPR005119 LysR, substrate-binding DB29_02875 ea2b4520e2f2f5f428213034c131725b 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 4.3E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DB29_02875 ea2b4520e2f2f5f428213034c131725b 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 4.3E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DB29_02875 ea2b4520e2f2f5f428213034c131725b 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 4.3E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DB29_02875 ea2b4520e2f2f5f428213034c131725b 299 Gene3D G3DSA:1.10.10.10 1 91 6.2E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_02875 ea2b4520e2f2f5f428213034c131725b 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 5.1E-19 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DB29_02875 ea2b4520e2f2f5f428213034c131725b 299 SUPERFAMILY SSF53850 87 259 1.21E-35 T 14-10-2018 DB29_02423 dacd5e4fb15ad3cfd13e098f1670bcac 471 Gene3D G3DSA:2.30.40.10 4 457 1.7E-186 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DB29_02423 dacd5e4fb15ad3cfd13e098f1670bcac 471 SUPERFAMILY SSF51556 54 384 1.09E-110 T 14-10-2018 IPR032466 Metal-dependent hydrolase DB29_02423 dacd5e4fb15ad3cfd13e098f1670bcac 471 SUPERFAMILY SSF51338 1 456 1.68E-34 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DB29_02423 dacd5e4fb15ad3cfd13e098f1670bcac 471 Gene3D G3DSA:3.20.20.140 54 425 1.7E-186 T 14-10-2018 DB29_02423 dacd5e4fb15ad3cfd13e098f1670bcac 471 TIGRFAM TIGR02033 D-hydantoinase: dihydropyrimidinase 4 456 1.4E-200 T 14-10-2018 IPR011778 Hydantoinase/dihydropyrimidinase GO:0005737 Reactome: R-HSA-399956 DB29_02423 dacd5e4fb15ad3cfd13e098f1670bcac 471 Pfam PF01979 Amidohydrolase family 50 437 1.6E-29 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 DB29_00479 09588305461fe4da32c28931f3923b93 183 Gene3D G3DSA:1.10.287.130 1 59 4.0E-19 T 14-10-2018 DB29_00479 09588305461fe4da32c28931f3923b93 183 Gene3D G3DSA:3.30.565.30 60 174 3.4E-10 T 14-10-2018 IPR037100 Sporulation initiation phosphotransferase B, C-terminal domain superfamily DB29_00479 09588305461fe4da32c28931f3923b93 183 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 3 59 1.9E-18 T 14-10-2018 IPR039506 SpoOB, alpha-helical domain DB29_00479 09588305461fe4da32c28931f3923b93 183 Pfam PF14682 Sporulation initiation phospho-transferase B, C-terminal 62 164 9.6E-10 T 14-10-2018 IPR016122 Sporulation initiation phosphotransferase B, C-terminal DB29_00479 09588305461fe4da32c28931f3923b93 183 SMART SM01317 61 175 4.5E-50 T 14-10-2018 IPR016122 Sporulation initiation phosphotransferase B, C-terminal DB29_00479 09588305461fe4da32c28931f3923b93 183 SUPERFAMILY SSF55890 1 177 1.83E-57 T 14-10-2018 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB GO:0000155|GO:0000160|GO:0016772 DB29_02730 1aea6029c55470d83e58618985a2fbb3 584 Gene3D G3DSA:1.10.287.950 303 575 4.0E-67 T 14-10-2018 DB29_02730 1aea6029c55470d83e58618985a2fbb3 584 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 345 526 1.2E-46 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DB29_02730 1aea6029c55470d83e58618985a2fbb3 584 SMART SM00283 300 575 4.9E-79 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DB29_02730 1aea6029c55470d83e58618985a2fbb3 584 SUPERFAMILY SSF58104 244 575 2.09E-69 T 14-10-2018 DB29_02730 1aea6029c55470d83e58618985a2fbb3 584 Gene3D G3DSA:1.20.1480.50 182 277 7.1E-14 T 14-10-2018 DB29_02730 1aea6029c55470d83e58618985a2fbb3 584 SMART SM00304 218 271 2.9E-13 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DB29_02730 1aea6029c55470d83e58618985a2fbb3 584 Pfam PF00672 HAMP domain 220 267 4.2E-14 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DB29_01902 d6bab86e2258c4f7c288d1f141a13b92 206 SUPERFAMILY SSF50447 1 205 1.15E-79 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily DB29_01902 d6bab86e2258c4f7c288d1f141a13b92 206 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 4 201 2.0E-84 T 14-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB29_01902 d6bab86e2258c4f7c288d1f141a13b92 206 Gene3D G3DSA:2.40.30.10 131 206 5.6E-18 T 14-10-2018 DB29_01902 d6bab86e2258c4f7c288d1f141a13b92 206 Gene3D G3DSA:2.40.50.620 34 94 1.4E-11 T 14-10-2018 DB29_01902 d6bab86e2258c4f7c288d1f141a13b92 206 ProSitePatterns PS00474 Ribosomal protein L3 signature. 100 123 - T 14-10-2018 IPR019926 Ribosomal protein L3, conserved site DB29_01902 d6bab86e2258c4f7c288d1f141a13b92 206 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 2 204 38.631 T 14-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB29_01902 d6bab86e2258c4f7c288d1f141a13b92 206 Pfam PF00297 Ribosomal protein L3 97 179 9.6E-16 T 14-10-2018 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DB29_02277 a2c7c75bac2aeea2083830ca92ebb462 292 Gene3D G3DSA:3.40.50.300 9 227 7.0E-42 T 14-10-2018 DB29_02277 a2c7c75bac2aeea2083830ca92ebb462 292 SUPERFAMILY SSF52540 6 223 6.41E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_02277 a2c7c75bac2aeea2083830ca92ebb462 292 Pfam PF00005 ABC transporter 20 154 7.9E-25 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB29_02277 a2c7c75bac2aeea2083830ca92ebb462 292 SMART SM00382 26 204 9.3E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_01594 7ff93ff56162337dc1dcc5470f8a4a0f 464 Pfam PF00392 Bacterial regulatory proteins, gntR family 16 79 4.7E-17 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DB29_01594 7ff93ff56162337dc1dcc5470f8a4a0f 464 Pfam PF00155 Aminotransferase class I and II 119 425 1.6E-13 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 DB29_01594 7ff93ff56162337dc1dcc5470f8a4a0f 464 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 39 53 4.5E-5 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DB29_01594 7ff93ff56162337dc1dcc5470f8a4a0f 464 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 53 69 4.5E-5 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DB29_01594 7ff93ff56162337dc1dcc5470f8a4a0f 464 Gene3D G3DSA:1.10.10.10 5 86 2.7E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_01594 7ff93ff56162337dc1dcc5470f8a4a0f 464 SUPERFAMILY SSF53383 99 462 1.28E-70 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DB29_01594 7ff93ff56162337dc1dcc5470f8a4a0f 464 SUPERFAMILY SSF46785 13 87 3.08E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_01594 7ff93ff56162337dc1dcc5470f8a4a0f 464 SMART SM00345 20 79 2.7E-14 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DB29_01594 7ff93ff56162337dc1dcc5470f8a4a0f 464 Gene3D G3DSA:3.40.640.10 96 457 2.1E-111 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DB29_01689 65697778132973a28c7200cc5a1a8674 349 SUPERFAMILY SSF55347 129 324 3.01E-29 T 14-10-2018 DB29_01689 65697778132973a28c7200cc5a1a8674 349 SUPERFAMILY SSF51735 2 150 1.88E-52 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_01689 65697778132973a28c7200cc5a1a8674 349 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 132 193 5.0E-9 T 14-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 DB29_01689 65697778132973a28c7200cc5a1a8674 349 Gene3D G3DSA:3.30.360.10 128 344 3.1E-94 T 14-10-2018 DB29_01689 65697778132973a28c7200cc5a1a8674 349 Gene3D G3DSA:3.40.50.720 5 326 3.1E-94 T 14-10-2018 DB29_01689 65697778132973a28c7200cc5a1a8674 349 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 1 120 7.6E-32 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 DB29_03943 c2344e0adfd6517eac863e4d01c22f92 239 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 7 229 9.9E-55 T 14-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 DB29_03943 c2344e0adfd6517eac863e4d01c22f92 239 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 5 228 1.3E-42 T 14-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 DB29_03943 c2344e0adfd6517eac863e4d01c22f92 239 SUPERFAMILY SSF51366 2 236 7.95E-67 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 DB29_03943 c2344e0adfd6517eac863e4d01c22f92 239 SMART SM00934 4 229 6.0E-83 T 14-10-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 DB29_03943 c2344e0adfd6517eac863e4d01c22f92 239 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 2 234 37.124 T 14-10-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 DB29_03943 c2344e0adfd6517eac863e4d01c22f92 239 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 56 69 - T 14-10-2018 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 DB29_03943 c2344e0adfd6517eac863e4d01c22f92 239 Gene3D G3DSA:3.20.20.70 1 238 1.1E-74 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DB29_01067 0d7fd9fa96c30034ad71b7d468945030 652 Pfam PF00905 Penicillin binding protein transpeptidase domain 338 636 4.1E-58 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 DB29_01067 0d7fd9fa96c30034ad71b7d468945030 652 Pfam PF05223 NTF2-like N-terminal transpeptidase domain 12 130 1.3E-16 T 14-10-2018 IPR007887 NTF2-like N-terminal transpeptidase GO:0046677 DB29_01067 0d7fd9fa96c30034ad71b7d468945030 652 Gene3D G3DSA:3.30.1390.30 158 231 6.3E-43 T 14-10-2018 DB29_01067 0d7fd9fa96c30034ad71b7d468945030 652 Pfam PF03717 Penicillin-binding Protein dimerisation domain 137 305 1.1E-30 T 14-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 DB29_01067 0d7fd9fa96c30034ad71b7d468945030 652 Gene3D G3DSA:3.10.450.100 10 125 1.4E-11 T 14-10-2018 DB29_01067 0d7fd9fa96c30034ad71b7d468945030 652 SUPERFAMILY SSF56519 131 320 3.92E-32 T 14-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 DB29_01067 0d7fd9fa96c30034ad71b7d468945030 652 SUPERFAMILY SSF56601 321 643 4.1E-72 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like DB29_01067 0d7fd9fa96c30034ad71b7d468945030 652 SUPERFAMILY SSF54427 14 127 2.54E-17 T 14-10-2018 IPR032710 NTF2-like domain superfamily DB29_01067 0d7fd9fa96c30034ad71b7d468945030 652 Gene3D G3DSA:3.90.1310.10 138 316 6.3E-43 T 14-10-2018 DB29_01067 0d7fd9fa96c30034ad71b7d468945030 652 Gene3D G3DSA:3.40.710.10 320 652 8.1E-75 T 14-10-2018 DB29_02751 e39b11584bcafe3ed703cd427f26ecf3 349 Gene3D G3DSA:3.30.470.20 210 326 1.9E-32 T 14-10-2018 DB29_02751 e39b11584bcafe3ed703cd427f26ecf3 349 Gene3D G3DSA:3.30.1490.20 117 207 1.8E-11 T 14-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 DB29_02751 e39b11584bcafe3ed703cd427f26ecf3 349 Gene3D G3DSA:3.40.50.20 1 116 9.8E-29 T 14-10-2018 DB29_02751 e39b11584bcafe3ed703cd427f26ecf3 349 SUPERFAMILY SSF56059 119 347 1.66E-29 T 14-10-2018 DB29_02751 e39b11584bcafe3ed703cd427f26ecf3 349 Pfam PF02655 ATP-grasp domain 113 291 9.2E-15 T 14-10-2018 IPR003806 ATP-grasp fold, DUF201-type GO:0005524|GO:0046872 DB29_02262 3af2ed96e719faf0b92f456ef9824880 451 Pfam PF07670 Nucleoside recognition 139 236 2.8E-10 T 14-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 DB29_02070 059ce247ae873ab2c932e14f427ffea7 289 Pfam PF02195 ParB-like nuclease domain 31 118 7.7E-28 T 14-10-2018 IPR003115 ParB/Sulfiredoxin DB29_02070 059ce247ae873ab2c932e14f427ffea7 289 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 26 203 2.7E-65 T 14-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 DB29_02070 059ce247ae873ab2c932e14f427ffea7 289 SUPERFAMILY SSF109709 111 222 1.36E-35 T 14-10-2018 DB29_02070 059ce247ae873ab2c932e14f427ffea7 289 SMART SM00470 30 119 9.9E-36 T 14-10-2018 IPR003115 ParB/Sulfiredoxin DB29_02070 059ce247ae873ab2c932e14f427ffea7 289 Gene3D G3DSA:1.10.10.2830 106 220 4.8E-39 T 14-10-2018 DB29_02070 059ce247ae873ab2c932e14f427ffea7 289 Gene3D G3DSA:3.90.1530.30 43 105 3.2E-27 T 14-10-2018 DB29_02070 059ce247ae873ab2c932e14f427ffea7 289 SUPERFAMILY SSF110849 29 121 4.97E-28 T 14-10-2018 IPR036086 ParB/Sulfiredoxin superfamily DB29_00287 73fde5f03443e8976037835e991259af 471 Pfam PF07690 Major Facilitator Superfamily 27 340 2.2E-19 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DB29_00287 73fde5f03443e8976037835e991259af 471 SUPERFAMILY SSF103473 18 400 4.71E-29 T 14-10-2018 IPR036259 MFS transporter superfamily DB29_00287 73fde5f03443e8976037835e991259af 471 Gene3D G3DSA:1.20.1250.20 16 399 1.2E-22 T 14-10-2018 DB29_02962 d3d0066a94d45fb0add17c874b66c95e 197 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 6 19 5.3E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DB29_02962 d3d0066a94d45fb0add17c874b66c95e 197 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 27 50 5.3E-6 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DB29_02962 d3d0066a94d45fb0add17c874b66c95e 197 SUPERFAMILY SSF48498 77 194 5.04E-17 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily DB29_02962 d3d0066a94d45fb0add17c874b66c95e 197 Gene3D G3DSA:1.10.10.60 1 50 8.7E-14 T 14-10-2018 DB29_02962 d3d0066a94d45fb0add17c874b66c95e 197 SUPERFAMILY SSF46689 2 66 1.45E-14 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DB29_02962 d3d0066a94d45fb0add17c874b66c95e 197 Pfam PF00440 Bacterial regulatory proteins, tetR family 8 49 3.0E-11 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DB29_02962 d3d0066a94d45fb0add17c874b66c95e 197 Gene3D G3DSA:1.10.357.10 51 190 1.2E-25 T 14-10-2018 DB29_01265 2053c30d5b8f1ce3e363c0ec9da7eb15 254 SUPERFAMILY SSF55920 1 247 2.49E-83 T 14-10-2018 IPR036005 Creatinase/aminopeptidase-like DB29_01265 2053c30d5b8f1ce3e363c0ec9da7eb15 254 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 165 183 - T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 DB29_01265 2053c30d5b8f1ce3e363c0ec9da7eb15 254 PRINTS PR00599 Methionine aminopeptidase-1 signature 67 80 2.2E-18 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 DB29_01265 2053c30d5b8f1ce3e363c0ec9da7eb15 254 PRINTS PR00599 Methionine aminopeptidase-1 signature 89 105 2.2E-18 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 DB29_01265 2053c30d5b8f1ce3e363c0ec9da7eb15 254 PRINTS PR00599 Methionine aminopeptidase-1 signature 159 171 2.2E-18 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 DB29_01265 2053c30d5b8f1ce3e363c0ec9da7eb15 254 PRINTS PR00599 Methionine aminopeptidase-1 signature 190 202 2.2E-18 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 DB29_01265 2053c30d5b8f1ce3e363c0ec9da7eb15 254 Hamap MF_01974 Methionine aminopeptidase [map]. 2 248 38.609 T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 DB29_01265 2053c30d5b8f1ce3e363c0ec9da7eb15 254 Pfam PF00557 Metallopeptidase family M24 12 239 4.9E-53 T 14-10-2018 IPR000994 Peptidase M24 DB29_01265 2053c30d5b8f1ce3e363c0ec9da7eb15 254 Gene3D G3DSA:3.90.230.10 1 253 9.1E-104 T 14-10-2018 DB29_01265 2053c30d5b8f1ce3e363c0ec9da7eb15 254 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 2 247 1.4E-89 T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 DB29_01888 adced11fddc6da8ed00663d263b95c93 132 SUPERFAMILY SSF56047 2 132 7.59E-49 T 14-10-2018 IPR035987 Ribosomal protein S8 superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB29_01888 adced11fddc6da8ed00663d263b95c93 132 Gene3D G3DSA:3.30.1490.10 75 132 3.0E-27 T 14-10-2018 DB29_01888 adced11fddc6da8ed00663d263b95c93 132 Gene3D G3DSA:3.30.1370.30 2 74 1.7E-32 T 14-10-2018 DB29_01888 adced11fddc6da8ed00663d263b95c93 132 ProSitePatterns PS00053 Ribosomal protein S8 signature. 102 119 - T 14-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB29_01888 adced11fddc6da8ed00663d263b95c93 132 Pfam PF00410 Ribosomal protein S8 5 132 1.4E-53 T 14-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB29_01888 adced11fddc6da8ed00663d263b95c93 132 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 132 33.204 T 14-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB29_04365 3d86ceb3b5ede099a6d2f376d049df55 102 Gene3D G3DSA:2.60.300.12 2 93 5.8E-6 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 DB29_04365 3d86ceb3b5ede099a6d2f376d049df55 102 SUPERFAMILY SSF89360 1 84 1.22E-12 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 DB29_04365 3d86ceb3b5ede099a6d2f376d049df55 102 Pfam PF01521 Iron-sulphur cluster biosynthesis 1 91 2.7E-9 T 14-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 DB29_04365 3d86ceb3b5ede099a6d2f376d049df55 102 PIRSF PIRSF034852 1 92 6.0E-30 T 14-10-2018 IPR008326 Uncharacterised conserved protein UCP034852 DB29_00742 40d4a0a24f57898b2c91e1f88dfc87d4 303 Gene3D G3DSA:1.10.3720.10 90 301 3.7E-26 T 14-10-2018 IPR035906 MetI-like superfamily DB29_00742 40d4a0a24f57898b2c91e1f88dfc87d4 303 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 118 301 9.9E-32 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DB29_00742 40d4a0a24f57898b2c91e1f88dfc87d4 303 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 25 77 7.5E-11 T 14-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain DB29_00742 40d4a0a24f57898b2c91e1f88dfc87d4 303 SUPERFAMILY SSF161098 96 283 4.32E-32 T 14-10-2018 IPR035906 MetI-like superfamily DB29_02619 591f88c55cd4a12afe98564a24430059 273 Pfam PF00294 pfkB family carbohydrate kinase 5 263 3.4E-64 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB DB29_02619 591f88c55cd4a12afe98564a24430059 273 TIGRFAM TIGR02152 D_ribokin_bact: ribokinase 1 268 2.9E-92 T 14-10-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 DB29_02619 591f88c55cd4a12afe98564a24430059 273 SUPERFAMILY SSF53613 3 270 4.52E-71 T 14-10-2018 IPR029056 Ribokinase-like DB29_02619 591f88c55cd4a12afe98564a24430059 273 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 215 228 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 DB29_02619 591f88c55cd4a12afe98564a24430059 273 Hamap MF_01987 Ribokinase [rbsK]. 1 270 20.493 T 14-10-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 DB29_02619 591f88c55cd4a12afe98564a24430059 273 PRINTS PR00990 Ribokinase signature 186 197 3.8E-23 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 DB29_02619 591f88c55cd4a12afe98564a24430059 273 PRINTS PR00990 Ribokinase signature 152 167 3.8E-23 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 DB29_02619 591f88c55cd4a12afe98564a24430059 273 PRINTS PR00990 Ribokinase signature 84 97 3.8E-23 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 DB29_02619 591f88c55cd4a12afe98564a24430059 273 PRINTS PR00990 Ribokinase signature 13 32 3.8E-23 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 DB29_02619 591f88c55cd4a12afe98564a24430059 273 Gene3D G3DSA:3.40.1190.20 1 271 1.3E-85 T 14-10-2018 IPR029056 Ribokinase-like DB29_03801 de4e517bdb0a1d32c8e498807d903a22 133 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 3 126 2.8E-39 T 14-10-2018 IPR011605 NusB antitermination factor GO:0006353 DB29_03801 de4e517bdb0a1d32c8e498807d903a22 133 Hamap MF_00073 Transcription antitermination protein NusB [nusB]. 1 130 22.017 T 14-10-2018 IPR011605 NusB antitermination factor GO:0006353 DB29_03801 de4e517bdb0a1d32c8e498807d903a22 133 Pfam PF01029 NusB family 5 125 3.2E-35 T 14-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 DB29_03801 de4e517bdb0a1d32c8e498807d903a22 133 Gene3D G3DSA:1.10.940.10 1 125 3.5E-39 T 14-10-2018 IPR035926 NusB-like superfamily DB29_03801 de4e517bdb0a1d32c8e498807d903a22 133 SUPERFAMILY SSF48013 3 124 2.22E-37 T 14-10-2018 IPR035926 NusB-like superfamily DB29_03301 88c15829d1f261c8ca4b3d91b96dec21 426 Gene3D G3DSA:3.90.1150.10 16 418 1.7E-154 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DB29_03301 88c15829d1f261c8ca4b3d91b96dec21 426 Pfam PF00202 Aminotransferase class-III 22 421 5.5E-141 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DB29_03301 88c15829d1f261c8ca4b3d91b96dec21 426 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 238 275 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DB29_03301 88c15829d1f261c8ca4b3d91b96dec21 426 Gene3D G3DSA:3.40.640.10 61 321 1.7E-154 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DB29_03301 88c15829d1f261c8ca4b3d91b96dec21 426 SUPERFAMILY SSF53383 24 424 8.66E-134 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DB29_03301 88c15829d1f261c8ca4b3d91b96dec21 426 PIRSF PIRSF000521 18 131 2.6E-7 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DB29_03301 88c15829d1f261c8ca4b3d91b96dec21 426 PIRSF PIRSF000521 124 425 1.7E-44 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DB29_03011 f440f2256fac4275eabba82b3cf0db8c 304 Pfam PF00892 EamA-like transporter family 151 283 1.4E-12 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DB29_03011 f440f2256fac4275eabba82b3cf0db8c 304 Pfam PF00892 EamA-like transporter family 7 135 2.3E-11 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DB29_03011 f440f2256fac4275eabba82b3cf0db8c 304 SUPERFAMILY SSF103481 45 136 9.94E-11 T 14-10-2018 DB29_03011 f440f2256fac4275eabba82b3cf0db8c 304 SUPERFAMILY SSF103481 206 284 1.44E-9 T 14-10-2018 DB29_01135 a80f2a645c1ac64dbae2dc51fff5e1fe 330 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 3 327 8.0E-97 T 14-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 DB29_01135 a80f2a645c1ac64dbae2dc51fff5e1fe 330 Gene3D G3DSA:3.90.650.10 147 327 1.8E-40 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily DB29_01135 a80f2a645c1ac64dbae2dc51fff5e1fe 330 SUPERFAMILY SSF56042 146 313 6.58E-25 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily DB29_01135 a80f2a645c1ac64dbae2dc51fff5e1fe 330 PIRSF PIRSF005303 2 327 6.1E-88 T 14-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 DB29_01135 a80f2a645c1ac64dbae2dc51fff5e1fe 330 Gene3D G3DSA:3.30.1330.10 1 146 1.8E-40 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily DB29_01135 a80f2a645c1ac64dbae2dc51fff5e1fe 330 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 2 327 27.013 T 14-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 DB29_01135 a80f2a645c1ac64dbae2dc51fff5e1fe 330 Pfam PF02769 AIR synthase related protein, C-terminal domain 152 292 5.0E-6 T 14-10-2018 IPR010918 PurM-like, C-terminal domain DB29_01135 a80f2a645c1ac64dbae2dc51fff5e1fe 330 SUPERFAMILY SSF55326 6 140 1.55E-32 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily DB29_01135 a80f2a645c1ac64dbae2dc51fff5e1fe 330 Pfam PF00586 AIR synthase related protein, N-terminal domain 27 140 8.9E-22 T 14-10-2018 IPR016188 PurM-like, N-terminal domain DB29_03776 b74e0089512de3e46a36f3d5cefdd155 766 SUPERFAMILY SSF52540 198 759 2.7E-54 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_03776 b74e0089512de3e46a36f3d5cefdd155 766 Pfam PF13245 AAA domain 210 570 5.5E-8 T 14-10-2018 DB29_03776 b74e0089512de3e46a36f3d5cefdd155 766 Gene3D G3DSA:3.40.50.300 511 571 1.6E-6 T 14-10-2018 DB29_03776 b74e0089512de3e46a36f3d5cefdd155 766 Gene3D G3DSA:3.40.50.300 198 345 1.1E-10 T 14-10-2018 DB29_03776 b74e0089512de3e46a36f3d5cefdd155 766 Gene3D G3DSA:1.10.10.160 442 510 1.6E-6 T 14-10-2018 IPR013986 DExx box DNA helicase domain superfamily DB29_03776 b74e0089512de3e46a36f3d5cefdd155 766 Pfam PF13538 UvrD-like helicase C-terminal domain 693 741 2.8E-8 T 14-10-2018 IPR027785 UvrD-like helicase C-terminal domain DB29_03776 b74e0089512de3e46a36f3d5cefdd155 766 Gene3D G3DSA:3.40.50.300 593 765 3.9E-50 T 14-10-2018 DB29_04105 87fa0d22aaf7ed5d58b7a706cc03e192 451 Pfam PF13183 4Fe-4S dicluster domain 35 101 3.9E-12 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DB29_04105 87fa0d22aaf7ed5d58b7a706cc03e192 451 Gene3D G3DSA:1.10.1060.10 15 119 4.6E-10 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 DB29_04105 87fa0d22aaf7ed5d58b7a706cc03e192 451 PIRSF PIRSF000139 17 450 1.9E-152 T 14-10-2018 DB29_04105 87fa0d22aaf7ed5d58b7a706cc03e192 451 SUPERFAMILY SSF46548 30 115 6.28E-18 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 DB29_04105 87fa0d22aaf7ed5d58b7a706cc03e192 451 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 87 98 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DB29_04105 87fa0d22aaf7ed5d58b7a706cc03e192 451 Pfam PF02754 Cysteine-rich domain 336 418 1.6E-13 T 14-10-2018 IPR004017 Cysteine-rich domain DB29_04105 87fa0d22aaf7ed5d58b7a706cc03e192 451 Pfam PF02754 Cysteine-rich domain 208 289 2.4E-14 T 14-10-2018 IPR004017 Cysteine-rich domain DB29_04105 87fa0d22aaf7ed5d58b7a706cc03e192 451 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 36 47 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DB29_02454 c3cbfa562abe087cbc063a63f9d449f6 662 SUPERFAMILY SSF81345 348 661 6.28E-70 T 14-10-2018 IPR037294 ABC transporter, BtuC-like DB29_02454 c3cbfa562abe087cbc063a63f9d449f6 662 Gene3D G3DSA:1.10.3470.10 338 661 2.4E-76 T 14-10-2018 IPR037294 ABC transporter, BtuC-like DB29_02454 c3cbfa562abe087cbc063a63f9d449f6 662 Gene3D G3DSA:1.10.3470.10 9 333 8.5E-85 T 14-10-2018 IPR037294 ABC transporter, BtuC-like DB29_02454 c3cbfa562abe087cbc063a63f9d449f6 662 SUPERFAMILY SSF81345 9 327 6.28E-72 T 14-10-2018 IPR037294 ABC transporter, BtuC-like DB29_02454 c3cbfa562abe087cbc063a63f9d449f6 662 Pfam PF01032 FecCD transport family 21 327 2.0E-80 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 DB29_02454 c3cbfa562abe087cbc063a63f9d449f6 662 Pfam PF01032 FecCD transport family 363 661 1.3E-78 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 DB29_02047 4db263b54cb0b964cf210ce885a9574d 485 Gene3D G3DSA:3.20.20.70 1 485 8.0E-225 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DB29_02047 4db263b54cb0b964cf210ce885a9574d 485 SUPERFAMILY SSF54631 68 206 1.52E-32 T 14-10-2018 DB29_02047 4db263b54cb0b964cf210ce885a9574d 485 PIRSF PIRSF000130 1 485 1.1E-211 T 14-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 DB29_02047 4db263b54cb0b964cf210ce885a9574d 485 Pfam PF00571 CBS domain 97 142 2.9E-8 T 14-10-2018 IPR000644 CBS domain DB29_02047 4db263b54cb0b964cf210ce885a9574d 485 Pfam PF00571 CBS domain 152 202 7.0E-8 T 14-10-2018 IPR000644 CBS domain DB29_02047 4db263b54cb0b964cf210ce885a9574d 485 SMART SM00116 98 146 1.2E-8 T 14-10-2018 IPR000644 CBS domain DB29_02047 4db263b54cb0b964cf210ce885a9574d 485 SMART SM00116 159 207 1.9E-8 T 14-10-2018 IPR000644 CBS domain DB29_02047 4db263b54cb0b964cf210ce885a9574d 485 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 10 472 3.5E-168 T 14-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 DB29_02047 4db263b54cb0b964cf210ce885a9574d 485 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 10 485 86.983 T 14-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 DB29_02047 4db263b54cb0b964cf210ce885a9574d 485 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 296 308 - T 14-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 DB29_02047 4db263b54cb0b964cf210ce885a9574d 485 SMART SM01240 9 472 0.0 T 14-10-2018 DB29_02047 4db263b54cb0b964cf210ce885a9574d 485 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 10 454 1.4E-200 T 14-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 DB29_02047 4db263b54cb0b964cf210ce885a9574d 485 SUPERFAMILY SSF51412 5 476 2.62E-126 T 14-10-2018 DB29_00418 dd1ec5f74fc5a6c3446b87dbebb9b87c 214 Hamap MF_00551 Uridine kinase [udk]. 4 208 41.558 T 14-10-2018 IPR026008 Uridine kinase GO:0004849|GO:0005524|GO:0016773 KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193 DB29_00418 dd1ec5f74fc5a6c3446b87dbebb9b87c 214 PRINTS PR00988 Uridine kinase signature 82 97 4.8E-37 T 14-10-2018 DB29_00418 dd1ec5f74fc5a6c3446b87dbebb9b87c 214 PRINTS PR00988 Uridine kinase signature 138 148 4.8E-37 T 14-10-2018 DB29_00418 dd1ec5f74fc5a6c3446b87dbebb9b87c 214 PRINTS PR00988 Uridine kinase signature 174 187 4.8E-37 T 14-10-2018 DB29_00418 dd1ec5f74fc5a6c3446b87dbebb9b87c 214 PRINTS PR00988 Uridine kinase signature 7 24 4.8E-37 T 14-10-2018 DB29_00418 dd1ec5f74fc5a6c3446b87dbebb9b87c 214 PRINTS PR00988 Uridine kinase signature 37 48 4.8E-37 T 14-10-2018 DB29_00418 dd1ec5f74fc5a6c3446b87dbebb9b87c 214 PRINTS PR00988 Uridine kinase signature 152 163 4.8E-37 T 14-10-2018 DB29_00418 dd1ec5f74fc5a6c3446b87dbebb9b87c 214 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 9 195 3.5E-42 T 14-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 DB29_00418 dd1ec5f74fc5a6c3446b87dbebb9b87c 214 TIGRFAM TIGR00235 udk: uridine kinase 6 207 3.4E-88 T 14-10-2018 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|Reactome: R-HSA-73614 DB29_00418 dd1ec5f74fc5a6c3446b87dbebb9b87c 214 SUPERFAMILY SSF52540 5 199 3.87E-49 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_00418 dd1ec5f74fc5a6c3446b87dbebb9b87c 214 Gene3D G3DSA:3.40.50.300 5 214 2.7E-65 T 14-10-2018 DB29_02595 3fcd9c738bdc1b62b1a38bbf8697c4b3 83 Pfam PF10842 Protein of unknown function (DUF2642) 8 68 4.0E-28 T 14-10-2018 IPR020139 Protein of unknown function DUF2642 DB29_02595 3fcd9c738bdc1b62b1a38bbf8697c4b3 83 ProDom PD058323 YUZF BH2251 11 68 1.0E-27 T 14-10-2018 IPR020139 Protein of unknown function DUF2642 DB29_04005 50381b681cf91e7aa13110c203be8ffe 131 PIRSF PIRSF002889 2 130 6.3E-30 T 14-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 DB29_04005 50381b681cf91e7aa13110c203be8ffe 131 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 5 128 2.3E-28 T 14-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 DB29_04005 50381b681cf91e7aa13110c203be8ffe 131 Pfam PF00460 Flagella basal body rod protein 18 37 7.2E-5 T 14-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 DB29_03118 e531642cf3a5746b806659db115633ff 59 SUPERFAMILY SSF69047 6 58 9.15E-10 T 14-10-2018 IPR036629 YjbJ superfamily DB29_03118 e531642cf3a5746b806659db115633ff 59 Gene3D G3DSA:1.10.1470.10 5 59 4.2E-8 T 14-10-2018 IPR036629 YjbJ superfamily DB29_03118 e531642cf3a5746b806659db115633ff 59 Pfam PF05532 CsbD-like 7 58 2.5E-14 T 14-10-2018 IPR008462 CsbD-like domain DB29_01410 f8a895ffcc173cd5265df13533d7c697 607 Pfam PF00667 FAD binding domain 235 430 7.3E-26 T 14-10-2018 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding GO:0016491|GO:0055114 DB29_01410 f8a895ffcc173cd5265df13533d7c697 607 TIGRFAM TIGR01931 cysJ: sulfite reductase [NADPH] flavoprotein, alpha-component 6 607 3.5E-257 T 14-10-2018 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DB29_01410 f8a895ffcc173cd5265df13533d7c697 607 Pfam PF00258 Flavodoxin 71 196 5.7E-33 T 14-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 DB29_01410 f8a895ffcc173cd5265df13533d7c697 607 SUPERFAMILY SSF63380 232 454 1.18E-59 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel DB29_01410 f8a895ffcc173cd5265df13533d7c697 607 Gene3D G3DSA:3.40.50.360 59 223 5.7E-51 T 14-10-2018 IPR029039 Flavoprotein-like superfamily DB29_01410 f8a895ffcc173cd5265df13533d7c697 607 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 489 498 8.2E-27 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 DB29_01410 f8a895ffcc173cd5265df13533d7c697 607 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 533 549 8.2E-27 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 DB29_01410 f8a895ffcc173cd5265df13533d7c697 607 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 273 283 8.2E-27 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 DB29_01410 f8a895ffcc173cd5265df13533d7c697 607 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 427 436 8.2E-27 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 DB29_01410 f8a895ffcc173cd5265df13533d7c697 607 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 502 513 8.2E-27 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 DB29_01410 f8a895ffcc173cd5265df13533d7c697 607 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 464 483 8.2E-27 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 DB29_01410 f8a895ffcc173cd5265df13533d7c697 607 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 556 564 8.2E-27 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 DB29_01410 f8a895ffcc173cd5265df13533d7c697 607 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 394 401 8.2E-27 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 DB29_01410 f8a895ffcc173cd5265df13533d7c697 607 Gene3D G3DSA:2.40.30.10 235 447 3.0E-69 T 14-10-2018 DB29_01410 f8a895ffcc173cd5265df13533d7c697 607 Gene3D G3DSA:1.20.990.10 283 392 3.0E-69 T 14-10-2018 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily GO:0016491|GO:0055114 DB29_01410 f8a895ffcc173cd5265df13533d7c697 607 SUPERFAMILY SSF52343 452 607 1.06E-50 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain DB29_01410 f8a895ffcc173cd5265df13533d7c697 607 PRINTS PR00369 Flavodoxin signature 174 193 7.6E-15 T 14-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 DB29_01410 f8a895ffcc173cd5265df13533d7c697 607 PRINTS PR00369 Flavodoxin signature 70 83 7.6E-15 T 14-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 DB29_01410 f8a895ffcc173cd5265df13533d7c697 607 PRINTS PR00369 Flavodoxin signature 118 129 7.6E-15 T 14-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 DB29_01410 f8a895ffcc173cd5265df13533d7c697 607 PRINTS PR00369 Flavodoxin signature 150 160 7.6E-15 T 14-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 DB29_01410 f8a895ffcc173cd5265df13533d7c697 607 Gene3D G3DSA:3.40.50.80 453 607 8.7E-58 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain DB29_01410 f8a895ffcc173cd5265df13533d7c697 607 PIRSF PIRSF000207 1 607 1.4E-262 T 14-10-2018 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DB29_01410 f8a895ffcc173cd5265df13533d7c697 607 SUPERFAMILY SSF52218 66 211 3.46E-48 T 14-10-2018 IPR029039 Flavoprotein-like superfamily DB29_01410 f8a895ffcc173cd5265df13533d7c697 607 Pfam PF00175 Oxidoreductase NAD-binding domain 465 572 4.4E-18 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 DB29_00179 68e80d6f857aed4fae346cb42cb35cf9 397 Pfam PF00925 GTP cyclohydrolase II 208 371 2.2E-76 T 14-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 DB29_00179 68e80d6f857aed4fae346cb42cb35cf9 397 Gene3D G3DSA:3.40.50.10990 205 374 6.8E-78 T 14-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 DB29_00179 68e80d6f857aed4fae346cb42cb35cf9 397 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 7 196 2.7E-84 T 14-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 DB29_00179 68e80d6f857aed4fae346cb42cb35cf9 397 SUPERFAMILY SSF55821 3 204 1.83E-84 T 14-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily DB29_00179 68e80d6f857aed4fae346cb42cb35cf9 397 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 2 197 4.7E-77 T 14-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 DB29_00179 68e80d6f857aed4fae346cb42cb35cf9 397 Hamap MF_01283 Riboflavin biosynthesis protein RibBA [ribBA]. 1 393 55.457 T 14-10-2018 IPR016299 Riboflavin biosynthesis protein RibBA GO:0009231 KEGG: 00740+3.5.4.25+4.1.99.12|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 DB29_00179 68e80d6f857aed4fae346cb42cb35cf9 397 SUPERFAMILY SSF142695 203 374 1.57E-74 T 14-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 DB29_00179 68e80d6f857aed4fae346cb42cb35cf9 397 Gene3D G3DSA:3.90.870.10 1 204 5.2E-90 T 14-10-2018 DB29_00179 68e80d6f857aed4fae346cb42cb35cf9 397 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 1 201 38.599 T 14-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 DB29_00179 68e80d6f857aed4fae346cb42cb35cf9 397 PIRSF PIRSF001259 1 397 3.0E-188 T 14-10-2018 DB29_00179 68e80d6f857aed4fae346cb42cb35cf9 397 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 210 395 1.5E-80 T 14-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 DB29_00179 68e80d6f857aed4fae346cb42cb35cf9 397 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 202 397 41.74 T 14-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 DB29_00958 d5b4472535285cc017edcab631d5d43e 741 PIRSF PIRSF001587 8 740 0.0 T 14-10-2018 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 DB29_00958 d5b4472535285cc017edcab631d5d43e 741 Gene3D G3DSA:3.90.650.10 570 739 1.4E-37 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily DB29_00958 d5b4472535285cc017edcab631d5d43e 741 Gene3D G3DSA:3.90.650.10 35 362 4.4E-133 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily DB29_00958 d5b4472535285cc017edcab631d5d43e 741 SUPERFAMILY SSF55326 18 202 1.21E-49 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily DB29_00958 d5b4472535285cc017edcab631d5d43e 741 SUPERFAMILY SSF56042 572 737 3.14E-37 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily DB29_00958 d5b4472535285cc017edcab631d5d43e 741 SUPERFAMILY SSF56042 204 430 4.04E-59 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily DB29_00958 d5b4472535285cc017edcab631d5d43e 741 SUPERFAMILY SSF55326 403 570 2.75E-59 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily DB29_00958 d5b4472535285cc017edcab631d5d43e 741 Gene3D G3DSA:3.30.1330.10 49 198 4.4E-133 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily DB29_00958 d5b4472535285cc017edcab631d5d43e 741 Pfam PF02769 AIR synthase related protein, C-terminal domain 207 360 7.0E-33 T 14-10-2018 IPR010918 PurM-like, C-terminal domain DB29_00958 d5b4472535285cc017edcab631d5d43e 741 Pfam PF02769 AIR synthase related protein, C-terminal domain 576 709 4.2E-13 T 14-10-2018 IPR010918 PurM-like, C-terminal domain DB29_00958 d5b4472535285cc017edcab631d5d43e 741 Gene3D G3DSA:3.30.1330.10 393 565 3.8E-64 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily DB29_00958 d5b4472535285cc017edcab631d5d43e 741 Hamap MF_00420 Phosphoribosylformylglycinamidine synthase subunit PurL [purL]. 1 741 324.75 T 14-10-2018 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 DB29_00958 d5b4472535285cc017edcab631d5d43e 741 Pfam PF00586 AIR synthase related protein, N-terminal domain 445 562 1.6E-25 T 14-10-2018 IPR016188 PurM-like, N-terminal domain DB29_00958 d5b4472535285cc017edcab631d5d43e 741 Pfam PF00586 AIR synthase related protein, N-terminal domain 91 194 1.6E-25 T 14-10-2018 IPR016188 PurM-like, N-terminal domain DB29_00958 d5b4472535285cc017edcab631d5d43e 741 TIGRFAM TIGR01736 FGAM_synth_II: phosphoribosylformylglycinamidine synthase II 23 736 0.0 T 14-10-2018 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 DB29_01341 dc13bcffe6727bbe4c97333ed3934044 290 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 20 221 1.5E-49 T 14-10-2018 IPR003740 Uncharacterised membrane protein YitT DB29_01341 dc13bcffe6727bbe4c97333ed3934044 290 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 227 281 6.1E-18 T 14-10-2018 IPR019264 Domain of unknown function DUF2179 DB29_01341 dc13bcffe6727bbe4c97333ed3934044 290 Gene3D G3DSA:3.30.70.120 199 273 7.3E-15 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal DB29_01341 dc13bcffe6727bbe4c97333ed3934044 290 PIRSF PIRSF006483 1 289 1.6E-74 T 14-10-2018 IPR003740 Uncharacterised membrane protein YitT DB29_02654 9e0f7c97de5596912daf2f1fad641402 352 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 57 71 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 DB29_02654 9e0f7c97de5596912daf2f1fad641402 352 SUPERFAMILY SSF50129 1 169 3.04E-48 T 14-10-2018 IPR011032 GroES-like superfamily DB29_02654 9e0f7c97de5596912daf2f1fad641402 352 Pfam PF00107 Zinc-binding dehydrogenase 171 303 5.9E-24 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 DB29_02654 9e0f7c97de5596912daf2f1fad641402 352 Gene3D G3DSA:3.90.180.10 21 323 1.4E-103 T 14-10-2018 DB29_02654 9e0f7c97de5596912daf2f1fad641402 352 SMART SM00829 7 334 0.0011 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 DB29_02654 9e0f7c97de5596912daf2f1fad641402 352 Gene3D G3DSA:3.40.50.720 148 282 1.4E-103 T 14-10-2018 DB29_02654 9e0f7c97de5596912daf2f1fad641402 352 SUPERFAMILY SSF51735 135 311 7.89E-35 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_02654 9e0f7c97de5596912daf2f1fad641402 352 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 25 128 9.9E-27 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 DB29_01041 ca0644f448bdc214f36192040e27c8ff 687 Gene3D G3DSA:1.10.1790.10 287 386 3.3E-14 T 14-10-2018 DB29_01041 ca0644f448bdc214f36192040e27c8ff 687 Gene3D G3DSA:3.40.930.10 533 687 1.4E-52 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 DB29_01041 ca0644f448bdc214f36192040e27c8ff 687 Gene3D G3DSA:1.10.10.10 2 145 6.5E-8 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_01041 ca0644f448bdc214f36192040e27c8ff 687 SUPERFAMILY SSF55804 533 680 6.54E-39 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 DB29_01041 ca0644f448bdc214f36192040e27c8ff 687 Pfam PF05043 Mga helix-turn-helix domain 73 159 5.8E-6 T 14-10-2018 IPR007737 Mga helix-turn-helix domain DB29_01041 ca0644f448bdc214f36192040e27c8ff 687 Gene3D G3DSA:3.40.50.2300 397 482 4.0E-6 T 14-10-2018 DB29_01041 ca0644f448bdc214f36192040e27c8ff 687 SUPERFAMILY SSF52794 396 479 2.3E-7 T 14-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 DB29_01041 ca0644f448bdc214f36192040e27c8ff 687 Pfam PF00874 PRD domain 294 382 3.5E-18 T 14-10-2018 IPR011608 PRD domain GO:0006355 DB29_01041 ca0644f448bdc214f36192040e27c8ff 687 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 538 679 9.6E-35 T 14-10-2018 IPR002178 PTS EIIA type-2 domain DB29_01041 ca0644f448bdc214f36192040e27c8ff 687 SUPERFAMILY SSF63520 289 384 9.02E-20 T 14-10-2018 IPR036634 PRD domain superfamily GO:0006355 DB29_00105 5a1db77d504db283b855bc4f34f856a1 68 ProDom PD054986 YPHE TRANSMEMBRANE MEMBRANE PRECURSOR BH1643 SIGNAL 1 64 4.0E-28 T 14-10-2018 IPR020076 Protein of unknown function DUF2768 DB29_00105 5a1db77d504db283b855bc4f34f856a1 68 Pfam PF10966 Protein of unknown function (DUF2768) 7 63 1.4E-21 T 14-10-2018 IPR020076 Protein of unknown function DUF2768 DB29_00848 7c90988c4428f181ec0173c812fb2fcc 761 Gene3D G3DSA:3.30.450.20 176 286 7.5E-10 T 14-10-2018 DB29_00848 7c90988c4428f181ec0173c812fb2fcc 761 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 709 751 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 DB29_00848 7c90988c4428f181ec0173c812fb2fcc 761 SUPERFAMILY SSF46689 708 757 1.88E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DB29_00848 7c90988c4428f181ec0173c812fb2fcc 761 SMART SM00342 672 755 1.6E-29 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DB29_00848 7c90988c4428f181ec0173c812fb2fcc 761 Gene3D G3DSA:1.10.10.60 705 760 1.8E-20 T 14-10-2018 DB29_00848 7c90988c4428f181ec0173c812fb2fcc 761 Pfam PF02743 Cache domain 31 273 1.6E-14 T 14-10-2018 IPR033479 Double Cache domain 1 DB29_00848 7c90988c4428f181ec0173c812fb2fcc 761 SUPERFAMILY SSF46689 659 706 8.96E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DB29_00848 7c90988c4428f181ec0173c812fb2fcc 761 Pfam PF12833 Helix-turn-helix domain 679 757 2.2E-22 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DB29_00848 7c90988c4428f181ec0173c812fb2fcc 761 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 724 739 2.8E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DB29_00848 7c90988c4428f181ec0173c812fb2fcc 761 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 739 755 2.8E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DB29_00848 7c90988c4428f181ec0173c812fb2fcc 761 Gene3D G3DSA:1.10.10.60 655 704 2.6E-17 T 14-10-2018 DB29_01831 6374d64528f9e19b6b2f2461bb5d3825 349 SUPERFAMILY SSF50129 1 177 5.93E-43 T 14-10-2018 IPR011032 GroES-like superfamily DB29_01831 6374d64528f9e19b6b2f2461bb5d3825 349 SMART SM00829 8 343 1.3E-4 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 DB29_01831 6374d64528f9e19b6b2f2461bb5d3825 349 Pfam PF00107 Zinc-binding dehydrogenase 178 305 3.3E-31 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 DB29_01831 6374d64528f9e19b6b2f2461bb5d3825 349 Gene3D G3DSA:3.40.50.720 155 290 5.6E-94 T 14-10-2018 DB29_01831 6374d64528f9e19b6b2f2461bb5d3825 349 Gene3D G3DSA:3.90.180.10 9 326 5.6E-94 T 14-10-2018 DB29_01831 6374d64528f9e19b6b2f2461bb5d3825 349 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 25 138 8.7E-22 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 DB29_01831 6374d64528f9e19b6b2f2461bb5d3825 349 SUPERFAMILY SSF51735 141 309 5.52E-43 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_01831 6374d64528f9e19b6b2f2461bb5d3825 349 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 69 83 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 DB29_00836 11f9059fbd936c38c5bf639419f4a960 493 SUPERFAMILY SSF48179 280 490 3.4E-35 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 DB29_00836 11f9059fbd936c38c5bf639419f4a960 493 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 24 179 4.6E-20 T 14-10-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 DB29_00836 11f9059fbd936c38c5bf639419f4a960 493 SUPERFAMILY SSF51735 19 275 3.11E-66 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_00836 11f9059fbd936c38c5bf639419f4a960 493 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 212 414 7.3E-39 T 14-10-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 DB29_00836 11f9059fbd936c38c5bf639419f4a960 493 Gene3D G3DSA:1.10.1040.10 280 490 1.0E-45 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 DB29_00836 11f9059fbd936c38c5bf639419f4a960 493 Gene3D G3DSA:3.40.50.720 8 275 2.3E-55 T 14-10-2018 DB29_02096 e2f6a235e30a56a90c9c2b3ee75dd76e 344 Gene3D G3DSA:3.90.180.10 10 326 3.3E-97 T 14-10-2018 DB29_02096 e2f6a235e30a56a90c9c2b3ee75dd76e 344 SUPERFAMILY SSF50129 1 171 1.02E-49 T 14-10-2018 IPR011032 GroES-like superfamily DB29_02096 e2f6a235e30a56a90c9c2b3ee75dd76e 344 Pfam PF00107 Zinc-binding dehydrogenase 172 300 5.9E-23 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 DB29_02096 e2f6a235e30a56a90c9c2b3ee75dd76e 344 Gene3D G3DSA:3.40.50.720 149 285 3.3E-97 T 14-10-2018 DB29_02096 e2f6a235e30a56a90c9c2b3ee75dd76e 344 SMART SM00829 7 338 5.9E-4 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 DB29_02096 e2f6a235e30a56a90c9c2b3ee75dd76e 344 SUPERFAMILY SSF51735 136 304 4.11E-39 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_02096 e2f6a235e30a56a90c9c2b3ee75dd76e 344 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 25 132 2.1E-29 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 DB29_02096 e2f6a235e30a56a90c9c2b3ee75dd76e 344 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 58 72 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 DB29_04018 6e25282bb108b1f875a69966d48c1ef0 143 Pfam PF03748 Flagellar basal body-associated protein FliL 53 143 4.6E-12 T 14-10-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 DB29_03613 bd9ebdd381b8815fd055eed4e13d3566 470 Gene3D G3DSA:3.30.499.20 4 285 3.8E-101 T 14-10-2018 DB29_03613 bd9ebdd381b8815fd055eed4e13d3566 470 SUPERFAMILY SSF53732 2 464 9.55E-166 T 14-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 DB29_03613 bd9ebdd381b8815fd055eed4e13d3566 470 PRINTS PR00415 Aconitase family signature 208 221 7.4E-44 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DB29_03613 bd9ebdd381b8815fd055eed4e13d3566 470 PRINTS PR00415 Aconitase family signature 342 353 7.4E-44 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DB29_03613 bd9ebdd381b8815fd055eed4e13d3566 470 PRINTS PR00415 Aconitase family signature 398 411 7.4E-44 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DB29_03613 bd9ebdd381b8815fd055eed4e13d3566 470 PRINTS PR00415 Aconitase family signature 81 94 7.4E-44 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DB29_03613 bd9ebdd381b8815fd055eed4e13d3566 470 PRINTS PR00415 Aconitase family signature 118 131 7.4E-44 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DB29_03613 bd9ebdd381b8815fd055eed4e13d3566 470 PRINTS PR00415 Aconitase family signature 194 207 7.4E-44 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DB29_03613 bd9ebdd381b8815fd055eed4e13d3566 470 PRINTS PR00415 Aconitase family signature 285 299 7.4E-44 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DB29_03613 bd9ebdd381b8815fd055eed4e13d3566 470 PRINTS PR00415 Aconitase family signature 107 115 7.4E-44 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DB29_03613 bd9ebdd381b8815fd055eed4e13d3566 470 PRINTS PR00415 Aconitase family signature 132 147 7.4E-44 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DB29_03613 bd9ebdd381b8815fd055eed4e13d3566 470 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 1 465 58.563 T 14-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 DB29_03613 bd9ebdd381b8815fd055eed4e13d3566 470 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 1 464 9.6E-234 T 14-10-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 DB29_03613 bd9ebdd381b8815fd055eed4e13d3566 470 ProSitePatterns PS00450 Aconitase family signature 1. 338 354 - T 14-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 DB29_03613 bd9ebdd381b8815fd055eed4e13d3566 470 Pfam PF00330 Aconitase family (aconitate hydratase) 7 456 5.6E-161 T 14-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 DB29_03613 bd9ebdd381b8815fd055eed4e13d3566 470 Gene3D G3DSA:3.30.499.10 323 469 3.2E-51 T 14-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 DB29_00377 e0eea10eeb0379ffe3ca5dc0af6edcd3 162 PIRSF PIRSF019239 1 161 9.0E-45 T 14-10-2018 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 DB29_00377 e0eea10eeb0379ffe3ca5dc0af6edcd3 162 Pfam PF01899 Na+/H+ ion antiporter subunit 10 156 1.3E-40 T 14-10-2018 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 DB29_00678 98f9db15275544cf6000ab6da7108c6d 273 Hamap MF_01114 Regulatory protein RecX [recX]. 46 215 15.808 T 14-10-2018 IPR003783 Regulatory protein RecX GO:0006282 DB29_00678 98f9db15275544cf6000ab6da7108c6d 273 Pfam PF02631 RecX family 88 210 2.4E-25 T 14-10-2018 IPR003783 Regulatory protein RecX GO:0006282 DB29_00678 98f9db15275544cf6000ab6da7108c6d 273 Gene3D G3DSA:1.10.10.10 158 217 6.4E-7 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_00678 98f9db15275544cf6000ab6da7108c6d 273 Gene3D G3DSA:1.10.10.10 218 273 1.5E-9 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_00678 98f9db15275544cf6000ab6da7108c6d 273 Gene3D G3DSA:1.10.10.2800 1 111 7.7E-35 T 14-10-2018 DB29_00678 98f9db15275544cf6000ab6da7108c6d 273 Gene3D G3DSA:1.10.10.10 112 156 7.0E-13 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_03737 f49e3ffb4addf3cb4b2d78b93eea5880 131 SUPERFAMILY SSF46458 9 126 1.57E-38 T 14-10-2018 IPR009050 Globin-like superfamily DB29_03737 f49e3ffb4addf3cb4b2d78b93eea5880 131 Pfam PF01152 Bacterial-like globin 11 125 2.7E-31 T 14-10-2018 IPR001486 Truncated hemoglobin GO:0019825 DB29_03737 f49e3ffb4addf3cb4b2d78b93eea5880 131 Gene3D G3DSA:1.10.490.10 5 129 3.1E-49 T 14-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 DB29_03737 f49e3ffb4addf3cb4b2d78b93eea5880 131 ProSitePatterns PS01213 Protozoan/cyanobacterial globins signature. 55 79 - T 14-10-2018 IPR019795 Globin, bacterial-like, conserved site GO:0015671|GO:0019825 DB29_01529 404f6d72983ccb341b65aa8da7bbfea7 304 Gene3D G3DSA:3.40.50.2000 129 299 3.8E-30 T 14-10-2018 DB29_01529 404f6d72983ccb341b65aa8da7bbfea7 304 SUPERFAMILY SSF53756 94 298 3.99E-39 T 14-10-2018 DB29_01529 404f6d72983ccb341b65aa8da7bbfea7 304 Pfam PF00534 Glycosyl transferases group 1 185 276 1.2E-22 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 DB29_00477 7d2784ca01a4365bc7ee5c25fb0416dd 147 PIRSF PIRSF025624 1 146 1.6E-58 T 14-10-2018 IPR008310 UPF0735 ACT domain-containing protein DB29_00477 7d2784ca01a4365bc7ee5c25fb0416dd 147 Gene3D G3DSA:3.30.70.260 68 145 5.8E-8 T 14-10-2018 DB29_00477 7d2784ca01a4365bc7ee5c25fb0416dd 147 SUPERFAMILY SSF55021 70 142 1.78E-10 T 14-10-2018 DB29_00477 7d2784ca01a4365bc7ee5c25fb0416dd 147 Hamap MF_00707 UPF0735 ACT domain-containing protein . 2 146 32.742 T 14-10-2018 IPR008310 UPF0735 ACT domain-containing protein DB29_00477 7d2784ca01a4365bc7ee5c25fb0416dd 147 Pfam PF01842 ACT domain 71 127 5.2E-8 T 14-10-2018 IPR002912 ACT domain DB29_03041 73648ad5f22e06ba924c8b8401a866b3 418 SUPERFAMILY SSF51735 16 131 4.06E-18 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_03041 73648ad5f22e06ba924c8b8401a866b3 418 SMART SM00858 332 398 4.5E-7 T 14-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 DB29_03041 73648ad5f22e06ba924c8b8401a866b3 418 Gene3D G3DSA:3.40.50.720 10 167 2.1E-19 T 14-10-2018 DB29_03041 73648ad5f22e06ba924c8b8401a866b3 418 Pfam PF08666 SAF domain 333 398 1.0E-6 T 14-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 DB29_01897 9b9e1d96bd833beeb601b068eff8444f 114 ProSitePatterns PS00464 Ribosomal protein L22 signature. 84 108 - T 14-10-2018 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB29_01897 9b9e1d96bd833beeb601b068eff8444f 114 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 2 111 29.718 T 14-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB29_01897 9b9e1d96bd833beeb601b068eff8444f 114 Pfam PF00237 Ribosomal protein L22p/L17e 6 109 1.3E-37 T 14-10-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 DB29_01897 9b9e1d96bd833beeb601b068eff8444f 114 Gene3D G3DSA:3.90.470.10 1 114 2.4E-50 T 14-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 DB29_01897 9b9e1d96bd833beeb601b068eff8444f 114 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 6 108 8.8E-49 T 14-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB29_01897 9b9e1d96bd833beeb601b068eff8444f 114 SUPERFAMILY SSF54843 3 113 1.44E-44 T 14-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 DB29_04092 9683e4df14039528d548fbed3c01a8bc 155 Gene3D G3DSA:3.30.565.10 3 145 6.0E-43 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB29_04092 9683e4df14039528d548fbed3c01a8bc 155 SUPERFAMILY SSF55874 4 133 1.96E-34 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB29_04092 9683e4df14039528d548fbed3c01a8bc 155 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 27 86 3.5E-10 T 14-10-2018 DB29_04092 9683e4df14039528d548fbed3c01a8bc 155 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 94 100 - T 14-10-2018 IPR014762 DNA mismatch repair, conserved site DB29_02972 0e48261f3618c495e6f16e991d76d1b5 289 SUPERFAMILY SSF53335 23 269 1.53E-21 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DB29_02972 0e48261f3618c495e6f16e991d76d1b5 289 Pfam PF13649 Methyltransferase domain 103 185 3.6E-8 T 14-10-2018 DB29_02972 0e48261f3618c495e6f16e991d76d1b5 289 PIRSF PIRSF018249 7 287 9.2E-77 T 14-10-2018 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted GO:0008168 DB29_02972 0e48261f3618c495e6f16e991d76d1b5 289 Gene3D G3DSA:3.40.50.150 20 286 1.3E-57 T 14-10-2018 DB29_02146 2e7f0e81bbb5763ca875b0edaa7671a5 538 Gene3D G3DSA:1.10.10.2840 400 531 1.1E-19 T 14-10-2018 DB29_02146 2e7f0e81bbb5763ca875b0edaa7671a5 538 Pfam PF13556 PucR C-terminal helix-turn-helix domain 469 527 1.9E-20 T 14-10-2018 IPR025736 PucR C-terminal helix-turn-helix domain DB29_02146 2e7f0e81bbb5763ca875b0edaa7671a5 538 Pfam PF07905 Purine catabolism regulatory protein-like family 5 121 5.6E-24 T 14-10-2018 IPR012914 Purine catabolism PurC-like domain DB29_00380 db06128f7d83111d0634bd2d35120da5 91 SUPERFAMILY SSF47729 1 90 2.94E-35 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 DB29_00380 db06128f7d83111d0634bd2d35120da5 91 SMART SM00411 1 90 3.8E-49 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DB29_00380 db06128f7d83111d0634bd2d35120da5 91 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 14-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 DB29_00380 db06128f7d83111d0634bd2d35120da5 91 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 4.3E-20 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DB29_00380 db06128f7d83111d0634bd2d35120da5 91 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 4.3E-20 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DB29_00380 db06128f7d83111d0634bd2d35120da5 91 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 4.3E-20 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DB29_00380 db06128f7d83111d0634bd2d35120da5 91 Gene3D G3DSA:4.10.520.10 1 91 1.2E-40 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 DB29_00380 db06128f7d83111d0634bd2d35120da5 91 Pfam PF00216 Bacterial DNA-binding protein 1 90 1.1E-37 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DB29_01226 3fdc4d2d2c6193f91761efc8c383f22a 313 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 127 312 6.8E-29 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DB29_01226 3fdc4d2d2c6193f91761efc8c383f22a 313 SUPERFAMILY SSF161098 105 291 1.31E-26 T 14-10-2018 IPR035906 MetI-like superfamily DB29_01226 3fdc4d2d2c6193f91761efc8c383f22a 313 Gene3D G3DSA:1.10.3720.10 98 312 1.9E-21 T 14-10-2018 IPR035906 MetI-like superfamily DB29_01226 3fdc4d2d2c6193f91761efc8c383f22a 313 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 34 86 3.1E-13 T 14-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain DB29_03925 5e325b58b5d8f3b5762073038d97daea 274 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 36 271 9.1E-49 T 14-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase DB29_03925 5e325b58b5d8f3b5762073038d97daea 274 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 31 269 4.6E-70 T 14-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase DB29_03925 5e325b58b5d8f3b5762073038d97daea 274 Gene3D G3DSA:3.60.140.10 3 273 2.8E-87 T 14-10-2018 IPR038371 Multi-copper polyphenol oxidoreductase superfamily DB29_03925 5e325b58b5d8f3b5762073038d97daea 274 SUPERFAMILY SSF64438 21 272 1.81E-76 T 14-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic DB29_00740 8632b9139fe9c17ae9d3cccdacbf6565 125 Gene3D G3DSA:3.40.50.1240 1 123 1.7E-15 T 14-10-2018 IPR029033 Histidine phosphatase superfamily DB29_00740 8632b9139fe9c17ae9d3cccdacbf6565 125 SUPERFAMILY SSF53254 2 102 1.09E-11 T 14-10-2018 IPR029033 Histidine phosphatase superfamily DB29_00740 8632b9139fe9c17ae9d3cccdacbf6565 125 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 2 106 4.5E-11 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 DB29_01979 8b846aab9cd82208a5813673df92b482 297 Hamap MF_00061 Putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 3 279 36.092 T 14-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 DB29_01979 8b846aab9cd82208a5813673df92b482 297 SUPERFAMILY SSF54211 3 157 6.0E-46 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DB29_01979 8b846aab9cd82208a5813673df92b482 297 SUPERFAMILY SSF55060 161 281 8.06E-33 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily DB29_01979 8b846aab9cd82208a5813673df92b482 297 Pfam PF00288 GHMP kinases N terminal domain 86 144 9.7E-13 T 14-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 DB29_01979 8b846aab9cd82208a5813673df92b482 297 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 3 283 2.2E-101 T 14-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 DB29_01979 8b846aab9cd82208a5813673df92b482 297 Gene3D G3DSA:3.30.230.10 1 159 5.4E-59 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DB29_01979 8b846aab9cd82208a5813673df92b482 297 Pfam PF08544 GHMP kinases C terminal 197 270 1.7E-12 T 14-10-2018 IPR013750 GHMP kinase, C-terminal domain DB29_01979 8b846aab9cd82208a5813673df92b482 297 Gene3D G3DSA:3.30.70.890 162 287 8.2E-31 T 14-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily DB29_01979 8b846aab9cd82208a5813673df92b482 297 PIRSF PIRSF010376 1 291 2.2E-95 T 14-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 DB29_00027 cb48011c533011cb5cefe2495c4cf43e 440 Gene3D G3DSA:3.40.50.1100 25 427 1.9E-184 T 14-10-2018 DB29_00027 cb48011c533011cb5cefe2495c4cf43e 440 Gene3D G3DSA:3.40.50.1100 118 240 1.9E-184 T 14-10-2018 DB29_00027 cb48011c533011cb5cefe2495c4cf43e 440 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 82 417 1.5E-54 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme DB29_00027 cb48011c533011cb5cefe2495c4cf43e 440 Hamap MF_01030 D-serine dehydratase [dsdA]. 1 440 229.854 T 14-10-2018 IPR011780 D-serine ammonia-lyase GO:0008721|GO:0030170|GO:0046416 KEGG: 00260+4.3.1.18 DB29_00027 cb48011c533011cb5cefe2495c4cf43e 440 SUPERFAMILY SSF53686 51 432 2.75E-56 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme DB29_00027 cb48011c533011cb5cefe2495c4cf43e 440 TIGRFAM TIGR02035 D_Ser_am_lyase: D-serine ammonia-lyase 12 427 8.2E-199 T 14-10-2018 IPR011780 D-serine ammonia-lyase GO:0008721|GO:0030170|GO:0046416 KEGG: 00260+4.3.1.18 DB29_00027 cb48011c533011cb5cefe2495c4cf43e 440 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 110 124 - T 14-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 DB29_01803 2c11dc5a81ad01246e5222f1afa6d13c 318 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 10 21 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 DB29_01803 2c11dc5a81ad01246e5222f1afa6d13c 318 PRINTS PR00987 Glutamyl-tRNA synthetase signature 206 214 1.0E-14 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 DB29_01803 2c11dc5a81ad01246e5222f1afa6d13c 318 PRINTS PR00987 Glutamyl-tRNA synthetase signature 7 19 1.0E-14 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 DB29_01803 2c11dc5a81ad01246e5222f1afa6d13c 318 PRINTS PR00987 Glutamyl-tRNA synthetase signature 36 49 1.0E-14 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 DB29_01803 2c11dc5a81ad01246e5222f1afa6d13c 318 PRINTS PR00987 Glutamyl-tRNA synthetase signature 190 200 1.0E-14 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 DB29_01803 2c11dc5a81ad01246e5222f1afa6d13c 318 PRINTS PR00987 Glutamyl-tRNA synthetase signature 21 32 1.0E-14 T 14-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 DB29_01803 2c11dc5a81ad01246e5222f1afa6d13c 318 Gene3D G3DSA:3.40.50.620 1 318 1.8E-103 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DB29_01803 2c11dc5a81ad01246e5222f1afa6d13c 318 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 4 314 1.5E-55 T 14-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 DB29_01803 2c11dc5a81ad01246e5222f1afa6d13c 318 Hamap MF_01428 Glutamyl-Q tRNA(Asp) synthetase [gluQ]. 4 315 39.751 T 14-10-2018 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0004812|GO:0006400 DB29_01803 2c11dc5a81ad01246e5222f1afa6d13c 318 SUPERFAMILY SSF52374 4 301 1.04E-85 T 14-10-2018 DB29_03396 bf723f32747c503d0ae0457db6f511c7 77 Pfam PF04070 Domain of unknown function (DUF378) 4 60 6.5E-26 T 14-10-2018 IPR007211 Protein of unknown function DUF378 DB29_03378 fa7148e9d04a12e134e10bd558dc09d3 375 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 2 122 2.1E-26 T 14-10-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 DB29_03378 fa7148e9d04a12e134e10bd558dc09d3 375 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 150 369 4.7E-49 T 14-10-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 DB29_03378 fa7148e9d04a12e134e10bd558dc09d3 375 Hamap MF_00196 Mannitol-1-phosphate 5-dehydrogenase [mtlD]. 2 375 39.206 T 14-10-2018 IPR023028 Mannitol-1-phosphate 5-dehydrogenase GO:0008926|GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 DB29_03378 fa7148e9d04a12e134e10bd558dc09d3 375 Gene3D G3DSA:1.10.1040.10 205 375 7.7E-58 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 DB29_03378 fa7148e9d04a12e134e10bd558dc09d3 375 SUPERFAMILY SSF48179 202 373 9.18E-43 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 DB29_03378 fa7148e9d04a12e134e10bd558dc09d3 375 SUPERFAMILY SSF51735 2 190 6.39E-42 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_03378 fa7148e9d04a12e134e10bd558dc09d3 375 Gene3D G3DSA:3.40.50.720 2 203 1.5E-73 T 14-10-2018 DB29_03378 fa7148e9d04a12e134e10bd558dc09d3 375 PRINTS PR00084 Mannitol dehydrogenase signature 4 14 3.8E-15 T 14-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 DB29_03378 fa7148e9d04a12e134e10bd558dc09d3 375 PRINTS PR00084 Mannitol dehydrogenase signature 114 127 3.8E-15 T 14-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 DB29_03378 fa7148e9d04a12e134e10bd558dc09d3 375 PRINTS PR00084 Mannitol dehydrogenase signature 150 163 3.8E-15 T 14-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 DB29_03378 fa7148e9d04a12e134e10bd558dc09d3 375 PRINTS PR00084 Mannitol dehydrogenase signature 168 183 3.8E-15 T 14-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 DB29_02313 6b8f60ee94f2e30398be719b7371dc02 534 Pfam PF00117 Glutamine amidotransferase class-I 303 527 4.6E-59 T 14-10-2018 IPR017926 Glutamine amidotransferase DB29_02313 6b8f60ee94f2e30398be719b7371dc02 534 Gene3D G3DSA:3.40.50.300 1 287 1.0E-134 T 14-10-2018 DB29_02313 6b8f60ee94f2e30398be719b7371dc02 534 SUPERFAMILY SSF52317 290 531 6.27E-86 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like DB29_02313 6b8f60ee94f2e30398be719b7371dc02 534 Hamap MF_01227 CTP synthase [pyrG]. 3 533 53.644 T 14-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 DB29_02313 6b8f60ee94f2e30398be719b7371dc02 534 SUPERFAMILY SSF52540 3 271 1.1E-125 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_02313 6b8f60ee94f2e30398be719b7371dc02 534 Gene3D G3DSA:3.40.50.880 288 534 5.0E-105 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like DB29_02313 6b8f60ee94f2e30398be719b7371dc02 534 TIGRFAM TIGR00337 PyrG: CTP synthase 2 527 3.9E-263 T 14-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 DB29_02313 6b8f60ee94f2e30398be719b7371dc02 534 Pfam PF06418 CTP synthase N-terminus 4 268 1.3E-129 T 14-10-2018 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 DB29_01502 763a02e213bdc38922ecb31e1a440139 154 Gene3D G3DSA:3.40.630.30 17 141 8.7E-10 T 14-10-2018 DB29_01502 763a02e213bdc38922ecb31e1a440139 154 SUPERFAMILY SSF55729 23 133 4.71E-12 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase DB29_01502 763a02e213bdc38922ecb31e1a440139 154 Pfam PF00583 Acetyltransferase (GNAT) family 47 135 1.2E-5 T 14-10-2018 IPR000182 GNAT domain DB29_00541 5b2dc8b0ebbfe396af55ab71ebd0e8a7 234 Gene3D G3DSA:1.10.10.10 8 78 2.4E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_00541 5b2dc8b0ebbfe396af55ab71ebd0e8a7 234 SUPERFAMILY SSF64288 61 232 3.45E-33 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily DB29_00541 5b2dc8b0ebbfe396af55ab71ebd0e8a7 234 SUPERFAMILY SSF46785 3 85 3.9E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_00541 5b2dc8b0ebbfe396af55ab71ebd0e8a7 234 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 33 47 1.7E-6 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DB29_00541 5b2dc8b0ebbfe396af55ab71ebd0e8a7 234 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 47 63 1.7E-6 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DB29_00541 5b2dc8b0ebbfe396af55ab71ebd0e8a7 234 SMART SM00345 14 73 4.1E-14 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DB29_00541 5b2dc8b0ebbfe396af55ab71ebd0e8a7 234 Gene3D G3DSA:3.40.1410.10 91 233 5.5E-29 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily DB29_00541 5b2dc8b0ebbfe396af55ab71ebd0e8a7 234 Pfam PF00392 Bacterial regulatory proteins, gntR family 10 73 2.9E-16 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DB29_00541 5b2dc8b0ebbfe396af55ab71ebd0e8a7 234 SMART SM00866 90 228 7.9E-26 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 DB29_00541 5b2dc8b0ebbfe396af55ab71ebd0e8a7 234 Pfam PF07702 UTRA domain 96 227 4.6E-26 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 DB29_00753 f41719f99ed3325a97722373f60bd231 265 Pfam PF00005 ABC transporter 22 178 1.1E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB29_00753 f41719f99ed3325a97722373f60bd231 265 SUPERFAMILY SSF52540 2 236 3.31E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_00753 f41719f99ed3325a97722373f60bd231 265 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB29_00753 f41719f99ed3325a97722373f60bd231 265 Gene3D G3DSA:3.40.50.300 1 261 4.3E-60 T 14-10-2018 DB29_00753 f41719f99ed3325a97722373f60bd231 265 SMART SM00382 31 236 1.1E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_00773 552afd71c7696500e9d5a3a0dd7507d4 452 SUPERFAMILY SSF53850 22 446 3.02E-53 T 14-10-2018 DB29_00773 552afd71c7696500e9d5a3a0dd7507d4 452 Pfam PF13416 Bacterial extracellular solute-binding protein 53 367 1.5E-26 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein DB29_00773 552afd71c7696500e9d5a3a0dd7507d4 452 Gene3D G3DSA:3.40.190.10 30 444 6.5E-70 T 14-10-2018 DB29_01642 f2f5802cc7e79f53ac8eae826a64152f 535 Gene3D G3DSA:3.40.50.300 263 535 5.2E-43 T 14-10-2018 DB29_01642 f2f5802cc7e79f53ac8eae826a64152f 535 Pfam PF00005 ABC transporter 300 455 1.2E-18 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB29_01642 f2f5802cc7e79f53ac8eae826a64152f 535 SUPERFAMILY SSF52540 274 515 5.56E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_01642 f2f5802cc7e79f53ac8eae826a64152f 535 SMART SM00382 308 504 6.0E-4 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_01642 f2f5802cc7e79f53ac8eae826a64152f 535 SMART SM00382 49 239 1.7E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_01642 f2f5802cc7e79f53ac8eae826a64152f 535 Pfam PF00005 ABC transporter 40 191 5.6E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB29_01642 f2f5802cc7e79f53ac8eae826a64152f 535 SUPERFAMILY SSF52540 23 245 2.83E-53 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_01642 f2f5802cc7e79f53ac8eae826a64152f 535 ProSitePatterns PS00211 ABC transporters family signature. 428 442 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB29_01642 f2f5802cc7e79f53ac8eae826a64152f 535 Gene3D G3DSA:3.40.50.300 20 259 9.2E-56 T 14-10-2018 DB29_03091 c8d8bdec4ab4aee38793e93ddbfc3951 290 Gene3D G3DSA:1.10.10.10 1 89 7.9E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_03091 c8d8bdec4ab4aee38793e93ddbfc3951 290 SUPERFAMILY SSF53850 88 284 6.65E-34 T 14-10-2018 DB29_03091 c8d8bdec4ab4aee38793e93ddbfc3951 290 Gene3D G3DSA:3.40.190.10 90 278 3.6E-25 T 14-10-2018 DB29_03091 c8d8bdec4ab4aee38793e93ddbfc3951 290 SUPERFAMILY SSF46785 1 109 2.4E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_03091 c8d8bdec4ab4aee38793e93ddbfc3951 290 Gene3D G3DSA:3.40.190.10 162 258 3.6E-25 T 14-10-2018 DB29_03091 c8d8bdec4ab4aee38793e93ddbfc3951 290 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 2.3E-18 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DB29_03091 c8d8bdec4ab4aee38793e93ddbfc3951 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 7.9E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DB29_03091 c8d8bdec4ab4aee38793e93ddbfc3951 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 7.9E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DB29_03091 c8d8bdec4ab4aee38793e93ddbfc3951 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 7.9E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DB29_03091 c8d8bdec4ab4aee38793e93ddbfc3951 290 Pfam PF03466 LysR substrate binding domain 88 284 1.3E-34 T 14-10-2018 IPR005119 LysR, substrate-binding DB29_01737 8eb1f1b6ad2c27d2db161f3129db4d77 394 SUPERFAMILY SSF56796 4 386 6.67E-119 T 14-10-2018 DB29_01737 8eb1f1b6ad2c27d2db161f3129db4d77 394 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 173 201 - T 14-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 DB29_01737 8eb1f1b6ad2c27d2db161f3129db4d77 394 Pfam PF00465 Iron-containing alcohol dehydrogenase 9 377 1.1E-117 T 14-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 DB29_01737 8eb1f1b6ad2c27d2db161f3129db4d77 394 Gene3D G3DSA:3.40.50.1970 1 184 9.2E-53 T 14-10-2018 DB29_01737 8eb1f1b6ad2c27d2db161f3129db4d77 394 Gene3D G3DSA:1.20.1090.10 185 389 6.2E-66 T 14-10-2018 DB29_04163 ed39acf7c97e90b316ff391a4c637c40 267 Gene3D G3DSA:3.30.565.10 146 261 4.2E-19 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB29_04163 ed39acf7c97e90b316ff391a4c637c40 267 SUPERFAMILY SSF55874 140 259 6.45E-9 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB29_04163 ed39acf7c97e90b316ff391a4c637c40 267 Pfam PF07730 Histidine kinase 77 142 8.4E-14 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 DB29_02357 24803aeffefc3487a74a3cc59cce942d 104 Gene3D G3DSA:1.10.3730.20 1 104 1.4E-22 T 14-10-2018 DB29_02357 24803aeffefc3487a74a3cc59cce942d 104 Pfam PF00893 Small Multidrug Resistance protein 1 93 6.6E-23 T 14-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 DB29_02357 24803aeffefc3487a74a3cc59cce942d 104 SUPERFAMILY SSF103481 5 101 4.71E-15 T 14-10-2018 DB29_01439 e554d6809b8ca5e9bf897c2bc8b41ca9 93 Pfam PF01910 Thiamine-binding protein 7 91 1.3E-21 T 14-10-2018 IPR002767 Thiamine-binding protein DB29_01439 e554d6809b8ca5e9bf897c2bc8b41ca9 93 SUPERFAMILY SSF89957 4 91 8.9E-23 T 14-10-2018 IPR029756 MTH1187/YkoF-like DB29_01439 e554d6809b8ca5e9bf897c2bc8b41ca9 93 Gene3D G3DSA:3.30.70.930 1 93 5.9E-28 T 14-10-2018 IPR029756 MTH1187/YkoF-like DB29_01886 246634bdb7df3c26c920c55771b3a0e3 120 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 6 120 2.7E-47 T 14-10-2018 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB29_01886 246634bdb7df3c26c920c55771b3a0e3 120 SUPERFAMILY SSF53137 7 118 1.53E-52 T 14-10-2018 DB29_01886 246634bdb7df3c26c920c55771b3a0e3 120 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 7 120 1.4E-42 T 14-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 DB29_01886 246634bdb7df3c26c920c55771b3a0e3 120 Gene3D G3DSA:3.30.420.100 6 120 7.5E-43 T 14-10-2018 DB29_01886 246634bdb7df3c26c920c55771b3a0e3 120 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 6 120 28.937 T 14-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 DB29_02485 a0f262012bf3f2373f3cb165d5a3482d 170 Gene3D G3DSA:3.40.630.30 3 157 3.0E-20 T 14-10-2018 DB29_02485 a0f262012bf3f2373f3cb165d5a3482d 170 SUPERFAMILY SSF55729 30 166 5.72E-22 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase DB29_02485 a0f262012bf3f2373f3cb165d5a3482d 170 Pfam PF00583 Acetyltransferase (GNAT) family 43 135 1.5E-11 T 14-10-2018 IPR000182 GNAT domain DB29_02793 7fcec891361c0a90793b0e616b0e9159 326 SUPERFAMILY SSF55347 127 296 1.18E-20 T 14-10-2018 DB29_02793 7fcec891361c0a90793b0e616b0e9159 326 SUPERFAMILY SSF51735 5 154 4.18E-38 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_02793 7fcec891361c0a90793b0e616b0e9159 326 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 6 120 1.2E-22 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 DB29_02793 7fcec891361c0a90793b0e616b0e9159 326 Gene3D G3DSA:3.40.50.720 2 124 8.6E-24 T 14-10-2018 DB29_02793 7fcec891361c0a90793b0e616b0e9159 326 Gene3D G3DSA:3.30.360.10 125 326 2.7E-34 T 14-10-2018 DB29_02793 7fcec891361c0a90793b0e616b0e9159 326 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 134 195 7.1E-7 T 14-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 DB29_00491 8e1e06aae8351d5da8093db072bfa495 364 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 2 357 48.539 T 14-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 DB29_00491 8e1e06aae8351d5da8093db072bfa495 364 Pfam PF00266 Aminotransferase class-V 5 339 7.0E-45 T 14-10-2018 IPR000192 Aminotransferase class V domain DB29_00491 8e1e06aae8351d5da8093db072bfa495 364 Gene3D G3DSA:3.90.1150.10 255 357 2.0E-39 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DB29_00491 8e1e06aae8351d5da8093db072bfa495 364 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 184 203 - T 14-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site DB29_00491 8e1e06aae8351d5da8093db072bfa495 364 Gene3D G3DSA:3.40.640.10 17 254 2.0E-83 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DB29_00491 8e1e06aae8351d5da8093db072bfa495 364 SUPERFAMILY SSF53383 2 356 1.39E-109 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DB29_00491 8e1e06aae8351d5da8093db072bfa495 364 PIRSF PIRSF000525 1 358 1.2E-145 T 14-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 DB29_00491 8e1e06aae8351d5da8093db072bfa495 364 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 5 357 5.6E-150 T 14-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 DB29_02114 bd08f189fd4c462b7838c5458a4c863a 577 Gene3D G3DSA:3.90.76.10 100 232 6.9E-126 T 14-10-2018 DB29_02114 bd08f189fd4c462b7838c5458a4c863a 577 PIRSF PIRSF002741 40 573 3.9E-108 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 DB29_02114 bd08f189fd4c462b7838c5458a4c863a 577 Gene3D G3DSA:3.40.190.10 82 557 6.9E-126 T 14-10-2018 DB29_02114 bd08f189fd4c462b7838c5458a4c863a 577 Gene3D G3DSA:3.10.105.10 325 542 6.9E-126 T 14-10-2018 DB29_02114 bd08f189fd4c462b7838c5458a4c863a 577 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 114 490 1.3E-82 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain DB29_02114 bd08f189fd4c462b7838c5458a4c863a 577 SUPERFAMILY SSF53850 66 565 1.77E-121 T 14-10-2018 DB29_02114 bd08f189fd4c462b7838c5458a4c863a 577 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 117 139 - T 14-10-2018 IPR023765 Solute-binding protein family 5, conserved site DB29_02606 8927506a6e7548e41bf0f619429ce8c2 101 SUPERFAMILY SSF50249 3 92 1.68E-22 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DB29_02606 8927506a6e7548e41bf0f619429ce8c2 101 Pfam PF01796 DUF35 OB-fold domain, acyl-CoA-associated 32 88 2.6E-15 T 14-10-2018 IPR002878 Domain of unknown function DUF35, OB-fold, C-terminal DB29_00493 c2390518ba0c24a5aaf2e853dbd51a28 191 SMART SM00347 32 132 1.8E-13 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DB29_00493 c2390518ba0c24a5aaf2e853dbd51a28 191 Pfam PF01047 MarR family 39 96 1.8E-14 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DB29_00493 c2390518ba0c24a5aaf2e853dbd51a28 191 Gene3D G3DSA:1.10.10.10 2 162 1.1E-43 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_00493 c2390518ba0c24a5aaf2e853dbd51a28 191 ProSitePatterns PS01117 MarR-type HTH domain signature. 71 105 - T 14-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site DB29_00493 c2390518ba0c24a5aaf2e853dbd51a28 191 SUPERFAMILY SSF46785 15 125 7.87E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_02457 709ab89c0a92696de3814ad5d10b38d5 347 Gene3D G3DSA:3.40.190.10 49 139 5.7E-8 T 14-10-2018 DB29_02457 709ab89c0a92696de3814ad5d10b38d5 347 SUPERFAMILY SSF53850 47 282 3.32E-32 T 14-10-2018 DB29_02457 709ab89c0a92696de3814ad5d10b38d5 347 Gene3D G3DSA:3.40.190.10 151 345 1.6E-30 T 14-10-2018 DB29_02457 709ab89c0a92696de3814ad5d10b38d5 347 Pfam PF09084 NMT1/THI5 like 59 273 2.4E-24 T 14-10-2018 IPR015168 SsuA/THI5-like DB29_02636 6cadd9fc28c3b971d65145ad6ff5c8c9 577 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 475 576 2.5E-7 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DB29_02636 6cadd9fc28c3b971d65145ad6ff5c8c9 577 Pfam PF06580 Histidine kinase 377 454 1.4E-24 T 14-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 DB29_02636 6cadd9fc28c3b971d65145ad6ff5c8c9 577 SUPERFAMILY SSF55874 432 575 1.44E-15 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB29_02636 6cadd9fc28c3b971d65145ad6ff5c8c9 577 SMART SM00304 313 365 5.3E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DB29_02636 6cadd9fc28c3b971d65145ad6ff5c8c9 577 SUPERFAMILY SSF158472 313 364 3.92E-9 T 14-10-2018 DB29_02636 6cadd9fc28c3b971d65145ad6ff5c8c9 577 Gene3D G3DSA:3.30.565.10 439 577 5.1E-16 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB29_02636 6cadd9fc28c3b971d65145ad6ff5c8c9 577 Pfam PF00672 HAMP domain 313 360 7.4E-7 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DB29_02636 6cadd9fc28c3b971d65145ad6ff5c8c9 577 Gene3D G3DSA:1.20.1480.50 278 371 4.7E-12 T 14-10-2018 DB29_02636 6cadd9fc28c3b971d65145ad6ff5c8c9 577 Pfam PF02743 Cache domain 33 231 2.8E-17 T 14-10-2018 IPR033479 Double Cache domain 1 DB29_00144 c4bd0a594cb774ea610db388d97290bd 533 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 198 220 - T 14-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site DB29_00144 c4bd0a594cb774ea610db388d97290bd 533 Pfam PF01842 ACT domain 461 516 2.4E-8 T 14-10-2018 IPR002912 ACT domain DB29_00144 c4bd0a594cb774ea610db388d97290bd 533 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 113 287 1.0E-62 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 DB29_00144 c4bd0a594cb774ea610db388d97290bd 533 Gene3D G3DSA:3.30.1330.90 325 459 2.9E-35 T 14-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 DB29_00144 c4bd0a594cb774ea610db388d97290bd 533 SUPERFAMILY SSF51735 104 288 7.65E-60 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_00144 c4bd0a594cb774ea610db388d97290bd 533 Gene3D G3DSA:3.40.50.720 100 289 5.0E-114 T 14-10-2018 DB29_00144 c4bd0a594cb774ea610db388d97290bd 533 Gene3D G3DSA:3.30.70.260 460 533 1.6E-20 T 14-10-2018 DB29_00144 c4bd0a594cb774ea610db388d97290bd 533 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 15 319 7.0E-35 T 14-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 DB29_00144 c4bd0a594cb774ea610db388d97290bd 533 TIGRFAM TIGR01327 PGDH: phosphoglycerate dehydrogenase 14 533 3.2E-203 T 14-10-2018 IPR006236 D-3-phosphoglycerate dehydrogenase GO:0004617|GO:0006564 KEGG: 00260+1.1.1.95|KEGG: 00680+1.1.1.95|Reactome: R-HSA-977347 DB29_00144 c4bd0a594cb774ea610db388d97290bd 533 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 150 177 - T 14-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 DB29_00144 c4bd0a594cb774ea610db388d97290bd 533 Gene3D G3DSA:3.40.50.720 14 298 5.0E-114 T 14-10-2018 DB29_00144 c4bd0a594cb774ea610db388d97290bd 533 SUPERFAMILY SSF55021 449 522 1.03E-16 T 14-10-2018 DB29_00144 c4bd0a594cb774ea610db388d97290bd 533 SUPERFAMILY SSF143548 325 455 1.31E-34 T 14-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 DB29_00144 c4bd0a594cb774ea610db388d97290bd 533 SUPERFAMILY SSF52283 16 135 2.27E-35 T 14-10-2018 DB29_00144 c4bd0a594cb774ea610db388d97290bd 533 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 227 243 - T 14-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site DB29_00639 92c6b9febdf1e9199388b3a35ddc18f8 461 Pfam PF11954 Domain of unknown function (DUF3471) 365 455 1.3E-7 T 14-10-2018 IPR021860 Peptidase S12, Pab87-related, C-terminal DB29_00639 92c6b9febdf1e9199388b3a35ddc18f8 461 SUPERFAMILY SSF56601 5 344 5.94E-80 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like DB29_00639 92c6b9febdf1e9199388b3a35ddc18f8 461 Pfam PF00144 Beta-lactamase 12 337 5.1E-55 T 14-10-2018 IPR001466 Beta-lactamase-related DB29_00639 92c6b9febdf1e9199388b3a35ddc18f8 461 Gene3D G3DSA:3.40.710.10 9 348 1.3E-79 T 14-10-2018 DB29_01122 182bba4893d910360ffdbd6838b6031b 364 PIRSF PIRSF000112 1 359 4.7E-113 T 14-10-2018 IPR016205 Glycerol dehydrogenase GO:0016614|GO:0046872|GO:0055114 KEGG: 00564+1.1.1.261|MetaCyc: PWY-6349 DB29_01122 182bba4893d910360ffdbd6838b6031b 364 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 150 178 - T 14-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 DB29_01122 182bba4893d910360ffdbd6838b6031b 364 Pfam PF00465 Iron-containing alcohol dehydrogenase 10 345 2.2E-57 T 14-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 DB29_01122 182bba4893d910360ffdbd6838b6031b 364 Gene3D G3DSA:3.40.50.1970 3 158 9.3E-28 T 14-10-2018 DB29_01122 182bba4893d910360ffdbd6838b6031b 364 SUPERFAMILY SSF56796 9 353 3.93E-66 T 14-10-2018 DB29_01122 182bba4893d910360ffdbd6838b6031b 364 Gene3D G3DSA:1.20.1090.10 160 358 1.8E-64 T 14-10-2018 DB29_03427 c4cbc33f9ada3e544dc75df575414c10 260 Pfam PF00326 Prolyl oligopeptidase family 62 255 1.7E-16 T 14-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 DB29_03427 c4cbc33f9ada3e544dc75df575414c10 260 Gene3D G3DSA:3.40.50.1820 15 256 2.1E-36 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DB29_03427 c4cbc33f9ada3e544dc75df575414c10 260 SUPERFAMILY SSF53474 17 254 2.06E-42 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DB29_01621 5a80fa3800809ddce45c21fa196f64a8 346 Hamap MF_01671 Inositol 2-dehydrogenase/D-chiro-inositol 3-dehydrogenase [iolG]. 1 337 51.611 T 14-10-2018 IPR023794 Inositol 2-dehydrogenase/D-chiro-inositol 3-dehydrogenase GO:0019310|GO:0050112|GO:0055114 KEGG: 00521+1.1.1.18|KEGG: 00562+1.1.1.18|MetaCyc: PWY-5940|MetaCyc: PWY-7237|MetaCyc: PWY-7241 DB29_01621 5a80fa3800809ddce45c21fa196f64a8 346 SUPERFAMILY SSF51735 3 153 4.0E-41 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_01621 5a80fa3800809ddce45c21fa196f64a8 346 Gene3D G3DSA:3.30.360.10 144 266 7.1E-108 T 14-10-2018 DB29_01621 5a80fa3800809ddce45c21fa196f64a8 346 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 3 125 5.0E-27 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 DB29_01621 5a80fa3800809ddce45c21fa196f64a8 346 SUPERFAMILY SSF55347 132 283 1.31E-14 T 14-10-2018 DB29_01621 5a80fa3800809ddce45c21fa196f64a8 346 Gene3D G3DSA:3.40.50.720 4 320 7.1E-108 T 14-10-2018 DB29_01621 5a80fa3800809ddce45c21fa196f64a8 346 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 137 239 7.6E-9 T 14-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 DB29_02498 6237cdf2cd37809343038ed53826b096 220 SUPERFAMILY SSF53335 4 213 6.41E-40 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DB29_02498 6237cdf2cd37809343038ed53826b096 220 Pfam PF01596 O-methyltransferase 32 204 2.3E-37 T 14-10-2018 IPR002935 O-methyltransferase, family 3 GO:0008171 DB29_02498 6237cdf2cd37809343038ed53826b096 220 Gene3D G3DSA:3.40.50.150 1 220 8.2E-73 T 14-10-2018 DB29_00442 f7f8b8698c1875e75cbdbe29eb02044d 426 Gene3D G3DSA:3.30.930.10 1 324 4.1E-117 T 14-10-2018 DB29_00442 f7f8b8698c1875e75cbdbe29eb02044d 426 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 1 420 33.604 T 14-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 DB29_00442 f7f8b8698c1875e75cbdbe29eb02044d 426 SUPERFAMILY SSF52954 328 422 3.47E-25 T 14-10-2018 DB29_00442 f7f8b8698c1875e75cbdbe29eb02044d 426 Pfam PF03129 Anticodon binding domain 331 420 1.6E-14 T 14-10-2018 IPR004154 Anticodon-binding DB29_00442 f7f8b8698c1875e75cbdbe29eb02044d 426 SUPERFAMILY SSF55681 3 319 3.83E-96 T 14-10-2018 DB29_00442 f7f8b8698c1875e75cbdbe29eb02044d 426 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 4 410 3.2E-154 T 14-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 DB29_00442 f7f8b8698c1875e75cbdbe29eb02044d 426 Gene3D G3DSA:3.40.50.800 325 419 2.9E-24 T 14-10-2018 IPR036621 Anticodon-binding domain superfamily DB29_00442 f7f8b8698c1875e75cbdbe29eb02044d 426 Pfam PF13393 Histidyl-tRNA synthetase 8 312 2.2E-46 T 14-10-2018 DB29_00442 f7f8b8698c1875e75cbdbe29eb02044d 426 PIRSF PIRSF001549 1 422 2.7E-120 T 14-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 DB29_04104 6f13720b792ea5a83a7b551ad54e8276 437 Gene3D G3DSA:3.30.465.40 16 216 8.0E-53 T 14-10-2018 DB29_04104 6f13720b792ea5a83a7b551ad54e8276 437 Pfam PF01565 FAD binding domain 31 166 4.5E-32 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 DB29_04104 6f13720b792ea5a83a7b551ad54e8276 437 SUPERFAMILY SSF55103 218 434 7.41E-21 T 14-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 DB29_04104 6f13720b792ea5a83a7b551ad54e8276 437 SUPERFAMILY SSF56176 29 203 1.26E-47 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 DB29_01388 9bc2d9d5474145306efd19e18e375e09 98 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 2 94 1.2E-22 T 14-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 DB29_01388 9bc2d9d5474145306efd19e18e375e09 98 Gene3D G3DSA:3.40.50.2300 1 98 1.8E-35 T 14-10-2018 DB29_01388 9bc2d9d5474145306efd19e18e375e09 98 SUPERFAMILY SSF52794 1 97 1.75E-33 T 14-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 DB29_01620 5db14c9b4d10e7a6abb21e99e4d10f4d 293 PIRSF PIRSF001359 1 284 1.4E-109 T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 DB29_01620 5db14c9b4d10e7a6abb21e99e4d10f4d 293 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 134 145 - T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 DB29_01620 5db14c9b4d10e7a6abb21e99e4d10f4d 293 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 3 284 7.9E-103 T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 DB29_01620 5db14c9b4d10e7a6abb21e99e4d10f4d 293 Gene3D G3DSA:3.20.20.70 1 292 5.2E-102 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DB29_01620 5db14c9b4d10e7a6abb21e99e4d10f4d 293 TIGRFAM TIGR01859 fruc_bis_ald_: fructose-1,6-bisphosphate aldolase, class II 4 284 2.7E-114 T 14-10-2018 IPR011289 Fructose-1,6-bisphosphate aldolase, class 2 GO:0004332|GO:0006096|GO:0008270|GO:0030388 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385 DB29_01620 5db14c9b4d10e7a6abb21e99e4d10f4d 293 Pfam PF01116 Fructose-bisphosphate aldolase class-II 6 283 6.6E-92 T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 DB29_01620 5db14c9b4d10e7a6abb21e99e4d10f4d 293 SUPERFAMILY SSF51569 3 284 5.71E-94 T 14-10-2018 DB29_00165 6c46f8316f65f468d59ba28ed33e67d3 156 TIGRFAM TIGR02838 spore_V_AC: stage V sporulation protein AC 11 150 8.9E-62 T 14-10-2018 IPR014203 Sporulation stage V, protein AC DB29_00165 6c46f8316f65f468d59ba28ed33e67d3 156 Pfam PF03862 SpoVAC/SpoVAEB sporulation membrane protein 29 146 8.2E-37 T 14-10-2018 IPR005562 SpoVA DB29_00926 c79d130b2e8ab72ef6ec5ea752eb59e7 350 Pfam PF04055 Radical SAM superfamily 108 266 1.7E-12 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 DB29_00926 c79d130b2e8ab72ef6ec5ea752eb59e7 350 Gene3D G3DSA:1.10.150.530 6 60 6.7E-10 T 14-10-2018 DB29_00926 c79d130b2e8ab72ef6ec5ea752eb59e7 350 TIGRFAM TIGR04432 rSAM_Cfr: 23S rRNA (adenine(2503)-C(8))-methyltransferase Cfr 6 344 7.4E-188 T 14-10-2018 IPR022881 Ribosomal RNA large subunit methyltransferase, Cfr GO:0070475 MetaCyc: PWY-6828 DB29_00926 c79d130b2e8ab72ef6ec5ea752eb59e7 350 PIRSF PIRSF006004 3 350 2.7E-95 T 14-10-2018 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 DB29_00926 c79d130b2e8ab72ef6ec5ea752eb59e7 350 Gene3D G3DSA:3.20.20.70 70 332 4.3E-79 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DB29_00926 c79d130b2e8ab72ef6ec5ea752eb59e7 350 Hamap MF_01873 Ribosomal RNA large subunit methyltransferase Cfr [cfr]. 4 347 66.557 T 14-10-2018 IPR022881 Ribosomal RNA large subunit methyltransferase, Cfr GO:0070475 MetaCyc: PWY-6828 DB29_00926 c79d130b2e8ab72ef6ec5ea752eb59e7 350 SUPERFAMILY SSF102114 107 316 2.16E-11 T 14-10-2018 DB29_03843 8ea3f2d2406bbbc40f1237efa48e1a12 152 Gene3D G3DSA:3.40.30.10 3 147 7.0E-38 T 14-10-2018 DB29_03843 8ea3f2d2406bbbc40f1237efa48e1a12 152 Pfam PF00578 AhpC/TSA family 9 127 2.7E-13 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 DB29_03843 8ea3f2d2406bbbc40f1237efa48e1a12 152 SUPERFAMILY SSF52833 4 143 1.62E-32 T 14-10-2018 IPR036249 Thioredoxin-like superfamily DB29_00633 2e4d34585fa8c88b2c18be8bd51b867f 892 Gene3D G3DSA:3.40.50.300 1 300 7.3E-24 T 14-10-2018 DB29_00633 2e4d34585fa8c88b2c18be8bd51b867f 892 Gene3D G3DSA:3.40.50.300 634 872 2.1E-16 T 14-10-2018 DB29_00633 2e4d34585fa8c88b2c18be8bd51b867f 892 Pfam PF13476 AAA domain 5 346 9.4E-13 T 14-10-2018 IPR038729 Rad50/SbcC-type AAA domain DB29_00633 2e4d34585fa8c88b2c18be8bd51b867f 892 SUPERFAMILY SSF52540 1 858 6.66E-24 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_02225 c820f61f98649b551902966ce2cc5b03 557 SUPERFAMILY SSF54675 57 200 1.24E-37 T 14-10-2018 DB29_02225 c820f61f98649b551902966ce2cc5b03 557 TIGRFAM TIGR01513 NAPRTase_put: nicotinate phosphoribosyltransferase 62 540 7.1E-145 T 14-10-2018 IPR006405 Nicotinate phosphoribosyltransferase pncB-type GO:0004516|GO:0019358 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264|Reactome: R-HSA-6798695 DB29_02225 c820f61f98649b551902966ce2cc5b03 557 SUPERFAMILY SSF51690 204 553 1.11E-111 T 14-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 DB29_02225 c820f61f98649b551902966ce2cc5b03 557 Gene3D G3DSA:3.20.20.70 214 383 1.0E-173 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DB29_02225 c820f61f98649b551902966ce2cc5b03 557 PIRSF PIRSF000484 55 554 1.9E-132 T 14-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 DB29_02225 c820f61f98649b551902966ce2cc5b03 557 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 219 384 6.8E-7 T 14-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 DB29_02225 c820f61f98649b551902966ce2cc5b03 557 Gene3D G3DSA:3.20.140.10 63 544 1.0E-173 T 14-10-2018 DB29_03998 3aa1c788c0ee6c6c06e8ac6f9f881545 261 Pfam PF02481 DNA recombination-mediator protein A 35 237 7.8E-80 T 14-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 DB29_03998 3aa1c788c0ee6c6c06e8ac6f9f881545 261 SUPERFAMILY SSF102405 44 235 1.67E-38 T 14-10-2018 DB29_03998 3aa1c788c0ee6c6c06e8ac6f9f881545 261 Gene3D G3DSA:3.40.50.450 3 251 1.8E-92 T 14-10-2018 DB29_03998 3aa1c788c0ee6c6c06e8ac6f9f881545 261 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 35 246 9.2E-80 T 14-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 DB29_01454 b259425df5793c87af8bc794f2e469d7 391 Gene3D G3DSA:3.30.420.40 203 363 1.9E-83 T 14-10-2018 DB29_01454 b259425df5793c87af8bc794f2e469d7 391 SUPERFAMILY SSF46785 8 73 1.71E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_01454 b259425df5793c87af8bc794f2e469d7 391 Pfam PF00480 ROK family 83 377 8.8E-64 T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 DB29_01454 b259425df5793c87af8bc794f2e469d7 391 SUPERFAMILY SSF53067 82 381 1.87E-54 T 14-10-2018 DB29_01454 b259425df5793c87af8bc794f2e469d7 391 Gene3D G3DSA:3.30.420.40 88 371 1.9E-83 T 14-10-2018 DB29_01454 b259425df5793c87af8bc794f2e469d7 391 Gene3D G3DSA:1.10.10.10 2 75 5.9E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_01454 b259425df5793c87af8bc794f2e469d7 391 Pfam PF13412 Winged helix-turn-helix DNA-binding 19 55 1.1E-5 T 14-10-2018 DB29_00270 aff78711654475f39161abcaeff722f9 326 SUPERFAMILY SSF53067 5 313 2.64E-68 T 14-10-2018 DB29_00270 aff78711654475f39161abcaeff722f9 326 Gene3D G3DSA:3.30.420.40 126 296 3.1E-105 T 14-10-2018 DB29_00270 aff78711654475f39161abcaeff722f9 326 ProSitePatterns PS01125 ROK family signature. 135 162 - T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 DB29_00270 aff78711654475f39161abcaeff722f9 326 Pfam PF00480 ROK family 6 312 5.2E-74 T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 DB29_00270 aff78711654475f39161abcaeff722f9 326 TIGRFAM TIGR00744 ROK_glcA_fam: ROK family protein (putative glucokinase) 7 311 9.8E-103 T 14-10-2018 IPR004654 Glucokinase ROK GO:0004340|GO:0005737|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 DB29_00270 aff78711654475f39161abcaeff722f9 326 Gene3D G3DSA:3.30.420.40 8 308 3.1E-105 T 14-10-2018 DB29_03296 1ce04484a4be220eaaa708946f4bf592 156 ProSitePatterns PS01317 SsrA-binding protein. 28 40 - T 14-10-2018 IPR020081 SsrA-binding protein, conserved site DB29_03296 1ce04484a4be220eaaa708946f4bf592 156 TIGRFAM TIGR00086 smpB: SsrA-binding protein 10 151 9.7E-61 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 DB29_03296 1ce04484a4be220eaaa708946f4bf592 156 Gene3D G3DSA:2.40.280.10 3 129 1.5E-55 T 14-10-2018 IPR023620 Small protein B DB29_03296 1ce04484a4be220eaaa708946f4bf592 156 Hamap MF_00023 SsrA-binding protein [smpB]. 1 156 80.267 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 DB29_03296 1ce04484a4be220eaaa708946f4bf592 156 SUPERFAMILY SSF74982 5 133 8.24E-56 T 14-10-2018 IPR023620 Small protein B DB29_03296 1ce04484a4be220eaaa708946f4bf592 156 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 10 133 7.0E-68 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 DB29_03296 1ce04484a4be220eaaa708946f4bf592 156 Pfam PF01668 SmpB protein 10 152 1.7E-65 T 14-10-2018 IPR000037 SsrA-binding protein GO:0003723 DB29_01810 515055aa22a71a40428952410783f970 784 Pfam PF02687 FtsX-like permease family 288 368 2.2E-10 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 DB29_03239 c009f2ce798784e794680041b22bc343 354 Pfam PF13349 Putative adhesin 157 349 3.5E-14 T 14-10-2018 IPR025164 Putative adhesin DB29_03239 c009f2ce798784e794680041b22bc343 354 PIRSF PIRSF012569 1 354 5.0E-128 T 14-10-2018 IPR016599 Uncharacterised conserved protein UCP012569 DB29_02429 890a706e7ff68c1540e3a02a9d3b99c1 288 Gene3D G3DSA:1.10.3720.10 14 279 1.6E-67 T 14-10-2018 IPR035906 MetI-like superfamily DB29_02429 890a706e7ff68c1540e3a02a9d3b99c1 288 SUPERFAMILY SSF161098 18 288 6.54E-72 T 14-10-2018 IPR035906 MetI-like superfamily DB29_02429 890a706e7ff68c1540e3a02a9d3b99c1 288 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 98 281 6.4E-14 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DB29_00371 dadaa1b338697851830d55b6c3b9a6ca 173 TIGRFAM TIGR01668 YqeG_hyp_ppase: HAD phosphatase, family IIIA 5 166 2.5E-51 T 14-10-2018 IPR010021 HAD-superfamily phosphatase, YqeG-like DB29_00371 dadaa1b338697851830d55b6c3b9a6ca 173 Pfam PF09419 Mitochondrial PGP phosphatase 4 135 6.4E-12 T 14-10-2018 IPR027706 Mitochondrial PGP phosphatase KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 DB29_00371 dadaa1b338697851830d55b6c3b9a6ca 173 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 60 130 8.5E-7 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DB29_00371 dadaa1b338697851830d55b6c3b9a6ca 173 Gene3D G3DSA:3.40.50.1000 22 161 4.5E-24 T 14-10-2018 IPR023214 HAD superfamily DB29_00371 dadaa1b338697851830d55b6c3b9a6ca 173 SUPERFAMILY SSF56784 7 151 6.75E-26 T 14-10-2018 IPR036412 HAD-like superfamily DB29_00371 dadaa1b338697851830d55b6c3b9a6ca 173 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 28 138 7.6E-22 T 14-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 DB29_02213 8cde853fff8d92cad921e09fbe46bc3d 84 SUPERFAMILY SSF81301 3 78 1.57E-12 T 14-10-2018 DB29_02213 8cde853fff8d92cad921e09fbe46bc3d 84 Pfam PF04229 GrpB protein 2 77 8.8E-19 T 14-10-2018 IPR007344 GrpB/Dephospho-CoA kinase DB29_02213 8cde853fff8d92cad921e09fbe46bc3d 84 Gene3D G3DSA:3.30.460.10 1 82 1.3E-13 T 14-10-2018 DB29_03703 a37f80664f95e7839232ef5573fc1b59 314 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 11 313 1.3E-132 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 DB29_03703 a37f80664f95e7839232ef5573fc1b59 314 PRINTS PR00102 Ornithine carbamoyltransferase signature 54 68 1.1E-28 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 DB29_03703 a37f80664f95e7839232ef5573fc1b59 314 PRINTS PR00102 Ornithine carbamoyltransferase signature 127 141 1.1E-28 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 DB29_03703 a37f80664f95e7839232ef5573fc1b59 314 PRINTS PR00102 Ornithine carbamoyltransferase signature 87 100 1.1E-28 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 DB29_03703 a37f80664f95e7839232ef5573fc1b59 314 PRINTS PR00102 Ornithine carbamoyltransferase signature 230 240 1.1E-28 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 DB29_03703 a37f80664f95e7839232ef5573fc1b59 314 PRINTS PR00102 Ornithine carbamoyltransferase signature 292 303 1.1E-28 T 14-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 DB29_03703 a37f80664f95e7839232ef5573fc1b59 314 SUPERFAMILY SSF53671 8 313 6.42E-110 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 DB29_03703 a37f80664f95e7839232ef5573fc1b59 314 Gene3D G3DSA:3.40.50.1370 11 140 2.3E-127 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 DB29_03703 a37f80664f95e7839232ef5573fc1b59 314 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 10 314 81.277 T 14-10-2018 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 DB29_03703 a37f80664f95e7839232ef5573fc1b59 314 Gene3D G3DSA:3.40.50.1370 141 309 2.3E-127 T 14-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 DB29_03703 a37f80664f95e7839232ef5573fc1b59 314 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 266 275 2.1E-26 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 DB29_03703 a37f80664f95e7839232ef5573fc1b59 314 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 138 149 2.1E-26 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 DB29_03703 a37f80664f95e7839232ef5573fc1b59 314 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 278 301 2.1E-26 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 DB29_03703 a37f80664f95e7839232ef5573fc1b59 314 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 56 75 2.1E-26 T 14-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 DB29_03703 a37f80664f95e7839232ef5573fc1b59 314 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 11 151 1.7E-53 T 14-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 DB29_03703 a37f80664f95e7839232ef5573fc1b59 314 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 158 311 3.1E-59 T 14-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 DB29_00205 33c9eeedaef1779fe21f83346ea87917 157 PIRSF PIRSF030780 1 155 6.3E-20 T 14-10-2018 IPR016956 Inner membrane protein YdjM DB29_00205 33c9eeedaef1779fe21f83346ea87917 157 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 1 150 1.0E-33 T 14-10-2018 IPR007404 LexA-binding, inner membrane-associated putative hydrolase DB29_01958 9de55ac091852a8875d7f0623c68c5d6 348 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 155 173 4.6E-17 T 14-10-2018 DB29_01958 9de55ac091852a8875d7f0623c68c5d6 348 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 265 287 4.6E-17 T 14-10-2018 DB29_01958 9de55ac091852a8875d7f0623c68c5d6 348 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 4.6E-17 T 14-10-2018 DB29_01958 9de55ac091852a8875d7f0623c68c5d6 348 SUPERFAMILY SSF51905 6 315 2.72E-40 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB29_01958 9de55ac091852a8875d7f0623c68c5d6 348 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 112 120 1.4E-16 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DB29_01958 9de55ac091852a8875d7f0623c68c5d6 348 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 151 175 1.4E-16 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DB29_01958 9de55ac091852a8875d7f0623c68c5d6 348 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 64 74 1.4E-16 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DB29_01958 9de55ac091852a8875d7f0623c68c5d6 348 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 8 30 1.4E-16 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DB29_01958 9de55ac091852a8875d7f0623c68c5d6 348 Hamap MF_01685 Ferredoxin--NADP reductase. 6 328 36.977 T 14-10-2018 IPR022890 Ferredoxin--NADP reductase, type 2 GO:0004324|GO:0055114 KEGG: 00195+1.18.1.2|MetaCyc: PWY-101 DB29_01958 9de55ac091852a8875d7f0623c68c5d6 348 Gene3D G3DSA:3.50.50.60 127 245 1.7E-84 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB29_01958 9de55ac091852a8875d7f0623c68c5d6 348 Gene3D G3DSA:3.50.50.60 6 304 1.7E-84 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB29_01958 9de55ac091852a8875d7f0623c68c5d6 348 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 302 3.6E-29 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DB29_04347 906ec72db98d51a10ea14bcad37585f9 477 PIRSF PIRSF005690 3 475 5.0E-149 T 14-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 DB29_04347 906ec72db98d51a10ea14bcad37585f9 477 Pfam PF03323 Bacillus/Clostridium GerA spore germination protein 16 473 4.1E-154 T 14-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 DB29_03647 d23454f5efbcc2ee42eaf3c68731128b 305 Pfam PF00248 Aldo/keto reductase family 15 294 4.6E-59 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain DB29_03647 d23454f5efbcc2ee42eaf3c68731128b 305 SUPERFAMILY SSF51430 1 297 9.43E-73 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily DB29_03647 d23454f5efbcc2ee42eaf3c68731128b 305 Gene3D G3DSA:3.20.20.100 1 296 1.9E-102 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily DB29_03647 d23454f5efbcc2ee42eaf3c68731128b 305 PRINTS PR00069 Aldo-keto reductase signature 103 121 5.6E-7 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DB29_03647 d23454f5efbcc2ee42eaf3c68731128b 305 PRINTS PR00069 Aldo-keto reductase signature 37 61 5.6E-7 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DB29_03647 d23454f5efbcc2ee42eaf3c68731128b 305 PRINTS PR00069 Aldo-keto reductase signature 134 151 5.6E-7 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DB29_02324 bd7d56b4b7fe499992f38238e1ff5bd6 439 SUPERFAMILY SSF51905 2 311 2.02E-48 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB29_02324 bd7d56b4b7fe499992f38238e1ff5bd6 439 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 2 302 2.5E-61 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DB29_02324 bd7d56b4b7fe499992f38238e1ff5bd6 439 SUPERFAMILY SSF55424 318 436 8.59E-30 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 DB29_02324 bd7d56b4b7fe499992f38238e1ff5bd6 439 Gene3D G3DSA:3.50.50.60 108 434 5.9E-156 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB29_02324 bd7d56b4b7fe499992f38238e1ff5bd6 439 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 327 426 4.9E-10 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 DB29_02324 bd7d56b4b7fe499992f38238e1ff5bd6 439 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 198 214 1.4E-20 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DB29_02324 bd7d56b4b7fe499992f38238e1ff5bd6 439 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 232 253 1.4E-20 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DB29_02324 bd7d56b4b7fe499992f38238e1ff5bd6 439 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 141 165 1.4E-20 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DB29_02324 bd7d56b4b7fe499992f38238e1ff5bd6 439 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 2 24 1.4E-20 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DB29_02324 bd7d56b4b7fe499992f38238e1ff5bd6 439 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 100 108 1.4E-20 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DB29_02324 bd7d56b4b7fe499992f38238e1ff5bd6 439 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 267 285 1.4E-20 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DB29_02324 bd7d56b4b7fe499992f38238e1ff5bd6 439 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 145 163 4.5E-28 T 14-10-2018 DB29_02324 bd7d56b4b7fe499992f38238e1ff5bd6 439 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 257 279 4.5E-28 T 14-10-2018 DB29_02324 bd7d56b4b7fe499992f38238e1ff5bd6 439 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 3 22 4.5E-28 T 14-10-2018 DB29_02324 bd7d56b4b7fe499992f38238e1ff5bd6 439 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 99 117 4.5E-28 T 14-10-2018 DB29_02324 bd7d56b4b7fe499992f38238e1ff5bd6 439 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 230 246 4.5E-28 T 14-10-2018 DB29_02324 bd7d56b4b7fe499992f38238e1ff5bd6 439 Gene3D G3DSA:3.50.50.60 2 335 5.9E-156 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB29_02310 f87843af584984ea31255058f91b7e57 380 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 125 137 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 DB29_02310 f87843af584984ea31255058f91b7e57 380 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 337 356 - T 14-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 DB29_02310 f87843af584984ea31255058f91b7e57 380 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 230 377 6.8E-53 T 14-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 DB29_02310 f87843af584984ea31255058f91b7e57 380 Gene3D G3DSA:1.10.540.10 1 121 4.1E-43 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 DB29_02310 f87843af584984ea31255058f91b7e57 380 PIRSF PIRSF016578 6 378 4.9E-25 T 14-10-2018 DB29_02310 f87843af584984ea31255058f91b7e57 380 SUPERFAMILY SSF56645 4 242 1.03E-86 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 DB29_02310 f87843af584984ea31255058f91b7e57 380 Gene3D G3DSA:2.40.110.10 122 235 1.0E-45 T 14-10-2018 DB29_02310 f87843af584984ea31255058f91b7e57 380 Gene3D G3DSA:1.20.140.10 236 380 4.3E-58 T 14-10-2018 DB29_02310 f87843af584984ea31255058f91b7e57 380 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 7 119 2.7E-36 T 14-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 DB29_02310 f87843af584984ea31255058f91b7e57 380 SUPERFAMILY SSF47203 228 378 1.19E-60 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 DB29_02310 f87843af584984ea31255058f91b7e57 380 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 123 218 1.3E-28 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 DB29_02665 64d6a85d1b810860c4d671ca9a3553b3 299 Gene3D G3DSA:1.10.10.10 1 93 8.5E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_02665 64d6a85d1b810860c4d671ca9a3553b3 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 4.2E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DB29_02665 64d6a85d1b810860c4d671ca9a3553b3 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 4.2E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DB29_02665 64d6a85d1b810860c4d671ca9a3553b3 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 4.2E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DB29_02665 64d6a85d1b810860c4d671ca9a3553b3 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.3E-16 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DB29_02665 64d6a85d1b810860c4d671ca9a3553b3 299 Gene3D G3DSA:3.40.190.290 94 295 2.2E-31 T 14-10-2018 DB29_02665 64d6a85d1b810860c4d671ca9a3553b3 299 SUPERFAMILY SSF53850 91 295 3.58E-35 T 14-10-2018 DB29_02665 64d6a85d1b810860c4d671ca9a3553b3 299 Pfam PF03466 LysR substrate binding domain 89 290 2.1E-36 T 14-10-2018 IPR005119 LysR, substrate-binding DB29_02665 64d6a85d1b810860c4d671ca9a3553b3 299 SUPERFAMILY SSF46785 1 111 1.49E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_01356 e08396e7fe9e049114ce34e07c62ff0d 530 SUPERFAMILY SSF55874 421 525 4.06E-20 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB29_01356 e08396e7fe9e049114ce34e07c62ff0d 530 SMART SM00387 417 528 1.1E-12 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DB29_01356 e08396e7fe9e049114ce34e07c62ff0d 530 Gene3D G3DSA:3.30.450.20 36 172 1.8E-39 T 14-10-2018 DB29_01356 e08396e7fe9e049114ce34e07c62ff0d 530 Gene3D G3DSA:3.30.450.20 203 310 3.9E-11 T 14-10-2018 DB29_01356 e08396e7fe9e049114ce34e07c62ff0d 530 SUPERFAMILY SSF103190 42 170 9.42E-32 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily DB29_01356 e08396e7fe9e049114ce34e07c62ff0d 530 SUPERFAMILY SSF55890 323 371 4.05E-9 T 14-10-2018 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB GO:0000155|GO:0000160|GO:0016772 DB29_01356 e08396e7fe9e049114ce34e07c62ff0d 530 Gene3D G3DSA:3.30.565.10 384 529 2.1E-18 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB29_01356 e08396e7fe9e049114ce34e07c62ff0d 530 Pfam PF17203 Single cache domain 3 42 170 6.5E-23 T 14-10-2018 IPR033463 Single cache domain 3 DB29_01356 e08396e7fe9e049114ce34e07c62ff0d 530 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 419 526 3.9E-14 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DB29_01356 e08396e7fe9e049114ce34e07c62ff0d 530 PRINTS PR00344 Bacterial sensor protein C-terminal signature 488 506 1.5E-6 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB29_01356 e08396e7fe9e049114ce34e07c62ff0d 530 PRINTS PR00344 Bacterial sensor protein C-terminal signature 458 472 1.5E-6 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB29_01356 e08396e7fe9e049114ce34e07c62ff0d 530 PRINTS PR00344 Bacterial sensor protein C-terminal signature 512 525 1.5E-6 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB29_01356 e08396e7fe9e049114ce34e07c62ff0d 530 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 323 371 4.4E-8 T 14-10-2018 IPR039506 SpoOB, alpha-helical domain DB29_01915 1dd8f915d2de03b4c6c1f2b4d25df438 141 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 66 3.2E-31 T 14-10-2018 IPR020784 Ribosomal protein L11, N-terminal DB29_01915 1dd8f915d2de03b4c6c1f2b4d25df438 141 Pfam PF00298 Ribosomal protein L11, RNA binding domain 71 139 1.2E-25 T 14-10-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 DB29_01915 1dd8f915d2de03b4c6c1f2b4d25df438 141 Gene3D G3DSA:1.10.10.250 72 140 2.6E-29 T 14-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily DB29_01915 1dd8f915d2de03b4c6c1f2b4d25df438 141 SUPERFAMILY SSF46906 67 140 2.49E-27 T 14-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily DB29_01915 1dd8f915d2de03b4c6c1f2b4d25df438 141 SMART SM00649 9 140 6.5E-87 T 14-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 DB29_01915 1dd8f915d2de03b4c6c1f2b4d25df438 141 SUPERFAMILY SSF54747 2 84 1.57E-30 T 14-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily DB29_01915 1dd8f915d2de03b4c6c1f2b4d25df438 141 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 141 6.4E-65 T 14-10-2018 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB29_01915 1dd8f915d2de03b4c6c1f2b4d25df438 141 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 141 31.657 T 14-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 DB29_01915 1dd8f915d2de03b4c6c1f2b4d25df438 141 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 73 3.0E-16 T 14-10-2018 DB29_01915 1dd8f915d2de03b4c6c1f2b4d25df438 141 Gene3D G3DSA:3.30.1550.10 2 71 4.3E-34 T 14-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily DB29_01915 1dd8f915d2de03b4c6c1f2b4d25df438 141 ProSitePatterns PS00359 Ribosomal protein L11 signature. 126 141 - T 14-10-2018 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB29_03506 4649557863da1d09a3e465105b5536e8 398 SUPERFAMILY SSF103473 1 381 1.96E-61 T 14-10-2018 IPR036259 MFS transporter superfamily DB29_03506 4649557863da1d09a3e465105b5536e8 398 Gene3D G3DSA:1.20.1250.20 6 378 5.0E-54 T 14-10-2018 DB29_03506 4649557863da1d09a3e465105b5536e8 398 Pfam PF07690 Major Facilitator Superfamily 14 284 1.9E-38 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DB29_03799 a64761f0287dc1164f7eaf9f414d4655 452 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 287 294 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 DB29_03799 a64761f0287dc1164f7eaf9f414d4655 452 SUPERFAMILY SSF56059 83 349 5.3E-72 T 14-10-2018 DB29_03799 a64761f0287dc1164f7eaf9f414d4655 452 Gene3D G3DSA:3.30.470.130 1 449 5.1E-201 T 14-10-2018 DB29_03799 a64761f0287dc1164f7eaf9f414d4655 452 SUPERFAMILY SSF52440 1 113 2.95E-48 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily DB29_03799 a64761f0287dc1164f7eaf9f414d4655 452 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 153 167 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 DB29_03799 a64761f0287dc1164f7eaf9f414d4655 452 SMART SM00878 337 443 1.8E-70 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 DB29_03799 a64761f0287dc1164f7eaf9f414d4655 452 Pfam PF02785 Biotin carboxylase C-terminal domain 337 444 2.2E-43 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 DB29_03799 a64761f0287dc1164f7eaf9f414d4655 452 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 2.4E-45 T 14-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 DB29_03799 a64761f0287dc1164f7eaf9f414d4655 452 SUPERFAMILY SSF51246 332 445 1.52E-46 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 DB29_03799 a64761f0287dc1164f7eaf9f414d4655 452 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 116 323 4.1E-84 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 DB29_03799 a64761f0287dc1164f7eaf9f414d4655 452 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 448 8.4E-232 T 14-10-2018 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 DB29_01602 c4bcd41e27eceee5443c3911597f5a0e 608 Pfam PF05043 Mga helix-turn-helix domain 82 159 7.0E-5 T 14-10-2018 IPR007737 Mga helix-turn-helix domain DB29_01602 c4bcd41e27eceee5443c3911597f5a0e 608 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 486 587 1.1E-8 T 14-10-2018 IPR002178 PTS EIIA type-2 domain DB29_01602 c4bcd41e27eceee5443c3911597f5a0e 608 Gene3D G3DSA:3.40.930.10 476 604 1.1E-10 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 DB29_01602 c4bcd41e27eceee5443c3911597f5a0e 608 SUPERFAMILY SSF46785 4 49 3.62E-7 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_01602 c4bcd41e27eceee5443c3911597f5a0e 608 SMART SM00420 4 53 0.0065 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DB29_01602 c4bcd41e27eceee5443c3911597f5a0e 608 Gene3D G3DSA:1.10.10.10 1 65 1.5E-14 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_01602 c4bcd41e27eceee5443c3911597f5a0e 608 Gene3D G3DSA:1.10.1790.10 293 384 5.1E-15 T 14-10-2018 DB29_01602 c4bcd41e27eceee5443c3911597f5a0e 608 SUPERFAMILY SSF63520 285 385 2.09E-17 T 14-10-2018 IPR036634 PRD domain superfamily GO:0006355 DB29_01602 c4bcd41e27eceee5443c3911597f5a0e 608 SUPERFAMILY SSF55804 483 606 8.2E-15 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 DB29_01602 c4bcd41e27eceee5443c3911597f5a0e 608 Pfam PF08279 HTH domain 4 62 1.7E-13 T 14-10-2018 IPR013196 Helix-turn-helix, type 11 DB29_01602 c4bcd41e27eceee5443c3911597f5a0e 608 Pfam PF00874 PRD domain 296 382 4.3E-17 T 14-10-2018 IPR011608 PRD domain GO:0006355 DB29_00723 80f14192be04b84abff1b7e477fd4264 444 Pfam PF01943 Polysaccharide biosynthesis protein 5 295 5.3E-21 T 14-10-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 DB29_00723 80f14192be04b84abff1b7e477fd4264 444 PIRSF PIRSF038958 1 438 2.2E-65 T 14-10-2018 IPR024923 Peptidoglycan biosynthesis protein, SpoVB-type DB29_00723 80f14192be04b84abff1b7e477fd4264 444 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 347 434 1.4E-8 T 14-10-2018 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain DB29_02644 37f9088604701d393b7da4dd8ae266f6 255 SUPERFAMILY SSF53697 85 245 8.01E-19 T 14-10-2018 DB29_02644 37f9088604701d393b7da4dd8ae266f6 255 Gene3D G3DSA:1.10.10.10 2 74 6.1E-13 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_02644 37f9088604701d393b7da4dd8ae266f6 255 Pfam PF01380 SIS domain 113 217 3.0E-14 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 DB29_02644 37f9088604701d393b7da4dd8ae266f6 255 Gene3D G3DSA:3.40.50.10490 81 255 5.5E-21 T 14-10-2018 DB29_02644 37f9088604701d393b7da4dd8ae266f6 255 SUPERFAMILY SSF46689 6 73 2.69E-14 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DB29_02644 37f9088604701d393b7da4dd8ae266f6 255 Pfam PF01418 Helix-turn-helix domain, rpiR family 4 70 6.8E-13 T 14-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 DB29_01541 1e90b925945fe61f8d2aad0ba2a70e9d 430 Gene3D G3DSA:3.20.20.70 69 362 5.4E-47 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DB29_01541 1e90b925945fe61f8d2aad0ba2a70e9d 430 SMART SM00729 68 265 8.5E-4 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 DB29_01541 1e90b925945fe61f8d2aad0ba2a70e9d 430 Pfam PF13353 4Fe-4S single cluster domain 77 153 1.2E-6 T 14-10-2018 DB29_01541 1e90b925945fe61f8d2aad0ba2a70e9d 430 SUPERFAMILY SSF102114 65 372 8.89E-53 T 14-10-2018 DB29_01541 1e90b925945fe61f8d2aad0ba2a70e9d 430 Pfam PF04055 Radical SAM superfamily 72 223 7.6E-21 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 DB29_01541 1e90b925945fe61f8d2aad0ba2a70e9d 430 PIRSF PIRSF037420 55 401 2.8E-51 T 14-10-2018 IPR017200 Coenzyme PQQ synthesis protein E DB29_01541 1e90b925945fe61f8d2aad0ba2a70e9d 430 TIGRFAM TIGR04085 rSAM_more_4Fe4S: radical SAM additional 4Fe4S-binding SPASM domain 311 392 5.8E-8 T 14-10-2018 IPR023885 4Fe4S-binding SPASM domain DB29_01541 1e90b925945fe61f8d2aad0ba2a70e9d 430 Pfam PF13186 Iron-sulfur cluster-binding domain 310 370 4.8E-12 T 14-10-2018 IPR023885 4Fe4S-binding SPASM domain DB29_02682 a6d09d3bb6ca43a365fd8e9874baab47 987 SMART SM00448 661 774 1.9E-34 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DB29_02682 a6d09d3bb6ca43a365fd8e9874baab47 987 SUPERFAMILY SSF55874 462 626 5.76E-42 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB29_02682 a6d09d3bb6ca43a365fd8e9874baab47 987 Gene3D G3DSA:3.40.50.12740 661 835 6.4E-37 T 14-10-2018 DB29_02682 a6d09d3bb6ca43a365fd8e9874baab47 987 SMART SM00388 405 473 1.6E-9 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DB29_02682 a6d09d3bb6ca43a365fd8e9874baab47 987 Pfam PF00072 Response regulator receiver domain 663 774 3.2E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DB29_02682 a6d09d3bb6ca43a365fd8e9874baab47 987 PRINTS PR00344 Bacterial sensor protein C-terminal signature 555 569 1.5E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB29_02682 a6d09d3bb6ca43a365fd8e9874baab47 987 PRINTS PR00344 Bacterial sensor protein C-terminal signature 587 605 1.5E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB29_02682 a6d09d3bb6ca43a365fd8e9874baab47 987 PRINTS PR00344 Bacterial sensor protein C-terminal signature 611 624 1.5E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB29_02682 a6d09d3bb6ca43a365fd8e9874baab47 987 PRINTS PR00344 Bacterial sensor protein C-terminal signature 573 583 1.5E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB29_02682 a6d09d3bb6ca43a365fd8e9874baab47 987 SUPERFAMILY SSF55874 846 985 6.02E-18 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB29_02682 a6d09d3bb6ca43a365fd8e9874baab47 987 SUPERFAMILY SSF47384 394 469 3.73E-13 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DB29_02682 a6d09d3bb6ca43a365fd8e9874baab47 987 Gene3D G3DSA:3.30.565.10 869 987 4.2E-18 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB29_02682 a6d09d3bb6ca43a365fd8e9874baab47 987 SMART SM00387 519 627 4.2E-33 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DB29_02682 a6d09d3bb6ca43a365fd8e9874baab47 987 SMART SM00387 884 987 0.019 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DB29_02682 a6d09d3bb6ca43a365fd8e9874baab47 987 Pfam PF06580 Histidine kinase 791 870 1.3E-23 T 14-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 DB29_02682 a6d09d3bb6ca43a365fd8e9874baab47 987 Pfam PF00512 His Kinase A (phospho-acceptor) domain 406 468 9.7E-11 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DB29_02682 a6d09d3bb6ca43a365fd8e9874baab47 987 Gene3D G3DSA:3.30.565.10 474 631 4.1E-43 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB29_02682 a6d09d3bb6ca43a365fd8e9874baab47 987 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 520 626 1.3E-24 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DB29_02682 a6d09d3bb6ca43a365fd8e9874baab47 987 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 893 986 1.6E-8 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DB29_02682 a6d09d3bb6ca43a365fd8e9874baab47 987 Gene3D G3DSA:1.10.287.130 384 470 3.0E-13 T 14-10-2018 DB29_02682 a6d09d3bb6ca43a365fd8e9874baab47 987 Pfam PF07695 7TM diverse intracellular signalling 183 378 4.1E-8 T 14-10-2018 IPR011623 7TM-DISM receptor, extracellular domain, type 1 DB29_02682 a6d09d3bb6ca43a365fd8e9874baab47 987 SUPERFAMILY SSF52172 660 817 2.7E-36 T 14-10-2018 IPR011006 CheY-like superfamily DB29_04380 b3ffb26a5f3f6e7486217c9315296c2a 284 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 11 215 3.6E-65 T 14-10-2018 IPR003740 Uncharacterised membrane protein YitT DB29_04380 b3ffb26a5f3f6e7486217c9315296c2a 284 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 221 275 1.2E-19 T 14-10-2018 IPR019264 Domain of unknown function DUF2179 DB29_04380 b3ffb26a5f3f6e7486217c9315296c2a 284 PIRSF PIRSF006483 3 282 1.2E-86 T 14-10-2018 IPR003740 Uncharacterised membrane protein YitT DB29_04380 b3ffb26a5f3f6e7486217c9315296c2a 284 Gene3D G3DSA:3.30.70.120 192 268 4.3E-23 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal DB29_03170 a6debc412df37654d6e1fc6715cdd2ba 291 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 107 284 5.7E-21 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DB29_03170 a6debc412df37654d6e1fc6715cdd2ba 291 SUPERFAMILY SSF161098 19 291 5.51E-72 T 14-10-2018 IPR035906 MetI-like superfamily DB29_03170 a6debc412df37654d6e1fc6715cdd2ba 291 Gene3D G3DSA:1.10.3720.10 16 278 5.0E-66 T 14-10-2018 IPR035906 MetI-like superfamily DB29_01519 e629751a7c842a5ead4e10902be4ce8b 202 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 6 189 5.8E-14 T 14-10-2018 IPR013830 SGNH hydrolase-type esterase domain DB29_01519 e629751a7c842a5ead4e10902be4ce8b 202 Gene3D G3DSA:3.40.50.1110 2 197 1.3E-19 T 14-10-2018 IPR036514 SGNH hydrolase superfamily DB29_01519 e629751a7c842a5ead4e10902be4ce8b 202 SUPERFAMILY SSF52266 3 196 1.55E-21 T 14-10-2018 DB29_01917 b013792702c20b47d6e9bc17d6837cda 62 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 10 62 1.2E-20 T 14-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 DB29_01917 b013792702c20b47d6e9bc17d6837cda 62 ProSitePatterns PS01067 Protein secE/sec61-gamma signature. 11 39 - T 14-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 DB29_01917 b013792702c20b47d6e9bc17d6837cda 62 Gene3D G3DSA:1.20.5.1030 6 62 2.1E-17 T 14-10-2018 IPR038379 SecE superfamily DB29_01917 b013792702c20b47d6e9bc17d6837cda 62 Hamap MF_00422 Protein translocase subunit SecE [secE]. 6 62 13.46 T 14-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 DB29_01917 b013792702c20b47d6e9bc17d6837cda 62 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 9 61 4.5E-22 T 14-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 DB29_01779 009bfaa8ebf4393b737690e505cf40f3 288 SUPERFAMILY SSF53474 10 284 1.15E-44 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DB29_01779 009bfaa8ebf4393b737690e505cf40f3 288 Gene3D G3DSA:3.40.50.1820 5 285 5.2E-48 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DB29_01779 009bfaa8ebf4393b737690e505cf40f3 288 PRINTS PR00111 Alpha/beta hydrolase fold signature 49 64 3.1E-5 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DB29_01779 009bfaa8ebf4393b737690e505cf40f3 288 PRINTS PR00111 Alpha/beta hydrolase fold signature 106 119 3.1E-5 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DB29_01779 009bfaa8ebf4393b737690e505cf40f3 288 PRINTS PR00111 Alpha/beta hydrolase fold signature 92 105 3.1E-5 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DB29_01779 009bfaa8ebf4393b737690e505cf40f3 288 Pfam PF00561 alpha/beta hydrolase fold 25 267 4.6E-17 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DB29_00507 76188c97e91a30c870f671006b6fed29 379 Pfam PF04286 Protein of unknown function (DUF445) 12 377 4.4E-81 T 14-10-2018 IPR007383 Protein of unknown function DUF445 DB29_00507 76188c97e91a30c870f671006b6fed29 379 PIRSF PIRSF032178 1 379 6.2E-141 T 14-10-2018 IPR016991 Protein of unknown function UCP032178 DB29_04381 24ea51064dedd982a058a3308bd42872 228 Pfam PF05719 Golgi phosphoprotein 3 (GPP34) 4 207 7.6E-40 T 14-10-2018 IPR008628 Golgi phosphoprotein 3-like GO:0070273 DB29_04381 24ea51064dedd982a058a3308bd42872 228 Gene3D G3DSA:1.10.3630.10 3 217 9.0E-26 T 14-10-2018 IPR038261 Golgi phosphoprotein 3-like domain superfamily DB29_02461 a2d2dd687599f4a5c135f16493f5483a 334 Pfam PF02625 XdhC and CoxI family 15 76 1.1E-15 T 14-10-2018 IPR003777 XdhC- CoxI DB29_02461 a2d2dd687599f4a5c135f16493f5483a 334 Pfam PF13478 XdhC Rossmann domain 185 320 3.2E-31 T 14-10-2018 IPR027051 XdhC Rossmann domain DB29_02461 a2d2dd687599f4a5c135f16493f5483a 334 Gene3D G3DSA:3.40.50.720 184 334 2.4E-49 T 14-10-2018 DB29_03650 a57a17de429b8352905225177a169f07 497 Pfam PF00575 S1 RNA binding domain 37 118 2.0E-6 T 14-10-2018 IPR003029 S1 domain GO:0003676 DB29_03650 a57a17de429b8352905225177a169f07 497 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 16 414 8.1E-120 T 14-10-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 DB29_03650 a57a17de429b8352905225177a169f07 497 Gene3D G3DSA:2.40.50.140 31 126 3.0E-25 T 14-10-2018 DB29_03650 a57a17de429b8352905225177a169f07 497 SMART SM00316 37 120 4.3E-8 T 14-10-2018 IPR022967 RNA-binding domain, S1 DB29_03650 a57a17de429b8352905225177a169f07 497 Pfam PF10150 Ribonuclease E/G family 122 386 4.0E-86 T 14-10-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 DB29_03650 a57a17de429b8352905225177a169f07 497 SUPERFAMILY SSF50249 39 125 2.94E-16 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DB29_00180 e6775b9692b5657874b403630298b502 214 Pfam PF00677 Lumazine binding domain 99 183 1.3E-25 T 14-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 DB29_00180 e6775b9692b5657874b403630298b502 214 Pfam PF00677 Lumazine binding domain 3 86 7.4E-24 T 14-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 DB29_00180 e6775b9692b5657874b403630298b502 214 Gene3D G3DSA:2.40.30.20 1 88 3.1E-31 T 14-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DB29_00180 e6775b9692b5657874b403630298b502 214 SUPERFAMILY SSF63380 1 88 2.04E-26 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel DB29_00180 e6775b9692b5657874b403630298b502 214 SUPERFAMILY SSF63380 92 194 4.08E-34 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel DB29_00180 e6775b9692b5657874b403630298b502 214 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 194 1.1E-78 T 14-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 DB29_00180 e6775b9692b5657874b403630298b502 214 PIRSF PIRSF000498 1 208 4.5E-79 T 14-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 DB29_00180 e6775b9692b5657874b403630298b502 214 Gene3D G3DSA:2.40.30.20 101 202 7.9E-37 T 14-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DB29_02761 db5618c8bfd794744c52c68a5749ac31 706 Gene3D G3DSA:3.40.930.10 548 705 7.4E-54 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 DB29_02761 db5618c8bfd794744c52c68a5749ac31 706 SUPERFAMILY SSF63520 289 393 1.7E-20 T 14-10-2018 IPR036634 PRD domain superfamily GO:0006355 DB29_02761 db5618c8bfd794744c52c68a5749ac31 706 Gene3D G3DSA:1.10.1790.10 298 396 3.1E-15 T 14-10-2018 DB29_02761 db5618c8bfd794744c52c68a5749ac31 706 Gene3D G3DSA:1.10.10.10 1 149 9.9E-6 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_02761 db5618c8bfd794744c52c68a5749ac31 706 Pfam PF05043 Mga helix-turn-helix domain 87 161 4.1E-7 T 14-10-2018 IPR007737 Mga helix-turn-helix domain DB29_02761 db5618c8bfd794744c52c68a5749ac31 706 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 554 694 2.5E-33 T 14-10-2018 IPR002178 PTS EIIA type-2 domain DB29_02761 db5618c8bfd794744c52c68a5749ac31 706 SUPERFAMILY SSF55804 550 695 1.29E-35 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 DB29_02761 db5618c8bfd794744c52c68a5749ac31 706 Pfam PF00874 PRD domain 305 390 6.4E-18 T 14-10-2018 IPR011608 PRD domain GO:0006355 DB29_02782 98daca336ff7615b303018684c546a07 228 Pfam PF00486 Transcriptional regulatory protein, C terminal 137 218 3.8E-14 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DB29_02782 98daca336ff7615b303018684c546a07 228 SUPERFAMILY SSF49879 7 102 3.63E-22 T 14-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 DB29_02782 98daca336ff7615b303018684c546a07 228 Gene3D G3DSA:1.10.10.10 120 226 1.6E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_02782 98daca336ff7615b303018684c546a07 228 SUPERFAMILY SSF46894 120 219 7.09E-16 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DB29_02782 98daca336ff7615b303018684c546a07 228 Gene3D G3DSA:2.60.200.20 2 119 3.3E-20 T 14-10-2018 DB29_02782 98daca336ff7615b303018684c546a07 228 SMART SM00240 26 77 2.2E-7 T 14-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 DB29_02782 98daca336ff7615b303018684c546a07 228 Pfam PF00498 FHA domain 28 93 9.1E-15 T 14-10-2018 IPR000253 Forkhead-associated (FHA) domain GO:0005515 DB29_02782 98daca336ff7615b303018684c546a07 228 SMART SM00862 137 218 1.9E-16 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DB29_04363 d7b63be6c0968d51d0b522ea89faf734 389 SUPERFAMILY SSF103473 5 371 1.09E-43 T 14-10-2018 IPR036259 MFS transporter superfamily DB29_04363 d7b63be6c0968d51d0b522ea89faf734 389 Pfam PF07690 Major Facilitator Superfamily 23 333 1.5E-26 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DB29_04363 d7b63be6c0968d51d0b522ea89faf734 389 Gene3D G3DSA:1.20.1250.20 1 369 1.3E-35 T 14-10-2018 DB29_03853 24e06dc5a9d61b16d9801984022dde40 468 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 348 456 3.4E-37 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 DB29_03853 24e06dc5a9d61b16d9801984022dde40 468 Gene3D G3DSA:3.50.50.60 13 334 7.7E-125 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB29_03853 24e06dc5a9d61b16d9801984022dde40 468 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 44 54 - T 14-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 DB29_03853 24e06dc5a9d61b16d9801984022dde40 468 Gene3D G3DSA:3.50.50.60 152 272 7.7E-125 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB29_03853 24e06dc5a9d61b16d9801984022dde40 468 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 11 329 4.8E-77 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DB29_03853 24e06dc5a9d61b16d9801984022dde40 468 Gene3D G3DSA:3.30.390.30 347 467 2.7E-44 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 DB29_03853 24e06dc5a9d61b16d9801984022dde40 468 SUPERFAMILY SSF51905 8 338 1.75E-67 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB29_03853 24e06dc5a9d61b16d9801984022dde40 468 PIRSF PIRSF000350 2 458 2.8E-103 T 14-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 DB29_03853 24e06dc5a9d61b16d9801984022dde40 468 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 140 158 4.8E-41 T 14-10-2018 DB29_03853 24e06dc5a9d61b16d9801984022dde40 468 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 12 31 4.8E-41 T 14-10-2018 DB29_03853 24e06dc5a9d61b16d9801984022dde40 468 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 178 196 4.8E-41 T 14-10-2018 DB29_03853 24e06dc5a9d61b16d9801984022dde40 468 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 294 316 4.8E-41 T 14-10-2018 DB29_03853 24e06dc5a9d61b16d9801984022dde40 468 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 265 281 4.8E-41 T 14-10-2018 DB29_03853 24e06dc5a9d61b16d9801984022dde40 468 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 10 466 3.7E-175 T 14-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 DB29_03853 24e06dc5a9d61b16d9801984022dde40 468 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 178 203 2.3E-76 T 14-10-2018 DB29_03853 24e06dc5a9d61b16d9801984022dde40 468 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 309 316 2.3E-76 T 14-10-2018 DB29_03853 24e06dc5a9d61b16d9801984022dde40 468 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 43 58 2.3E-76 T 14-10-2018 DB29_03853 24e06dc5a9d61b16d9801984022dde40 468 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 344 365 2.3E-76 T 14-10-2018 DB29_03853 24e06dc5a9d61b16d9801984022dde40 468 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 431 451 2.3E-76 T 14-10-2018 DB29_03853 24e06dc5a9d61b16d9801984022dde40 468 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 143 152 2.3E-76 T 14-10-2018 DB29_03853 24e06dc5a9d61b16d9801984022dde40 468 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 11 33 2.3E-76 T 14-10-2018 DB29_03853 24e06dc5a9d61b16d9801984022dde40 468 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 409 424 2.3E-76 T 14-10-2018 DB29_03853 24e06dc5a9d61b16d9801984022dde40 468 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 266 280 2.3E-76 T 14-10-2018 DB29_03853 24e06dc5a9d61b16d9801984022dde40 468 SUPERFAMILY SSF55424 344 466 2.92E-42 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 DB29_01481 0b6cc13b0d6124681c6ab09de13a4bde 402 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 24 338 4.9E-66 T 14-10-2018 IPR017439 Amidohydrolase GO:0016787 DB29_01481 0b6cc13b0d6124681c6ab09de13a4bde 402 Gene3D G3DSA:3.40.630.10 25 367 5.1E-129 T 14-10-2018 DB29_01481 0b6cc13b0d6124681c6ab09de13a4bde 402 SUPERFAMILY SSF55031 176 278 1.83E-22 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain DB29_01481 0b6cc13b0d6124681c6ab09de13a4bde 402 Gene3D G3DSA:3.30.70.360 172 289 5.1E-129 T 14-10-2018 DB29_01481 0b6cc13b0d6124681c6ab09de13a4bde 402 Pfam PF07687 Peptidase dimerisation domain 180 266 1.3E-9 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain DB29_01481 0b6cc13b0d6124681c6ab09de13a4bde 402 PIRSF PIRSF037226 1 400 6.6E-171 T 14-10-2018 IPR017144 Peptidase M20A, amidohydrolase, predicted DB29_01481 0b6cc13b0d6124681c6ab09de13a4bde 402 Pfam PF01546 Peptidase family M20/M25/M40 86 343 1.4E-9 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 DB29_01481 0b6cc13b0d6124681c6ab09de13a4bde 402 SUPERFAMILY SSF53187 9 380 9.74E-58 T 14-10-2018 DB29_02260 67658302b0f1ef7f51544428497db773 500 Pfam PF00221 Aromatic amino acid lyase 9 466 8.2E-197 T 14-10-2018 IPR001106 Aromatic amino acid lyase Reactome: R-HSA-70921 DB29_02260 67658302b0f1ef7f51544428497db773 500 TIGRFAM TIGR01225 hutH: histidine ammonia-lyase 2 496 7.7E-220 T 14-10-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 DB29_02260 67658302b0f1ef7f51544428497db773 500 Hamap MF_00229 Histidine ammonia-lyase [hutH]. 1 500 45.953 T 14-10-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 DB29_02260 67658302b0f1ef7f51544428497db773 500 Gene3D G3DSA:1.20.200.10 196 495 4.6E-123 T 14-10-2018 DB29_02260 67658302b0f1ef7f51544428497db773 500 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 137 153 - T 14-10-2018 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 Reactome: R-HSA-70921 DB29_02260 67658302b0f1ef7f51544428497db773 500 SUPERFAMILY SSF48557 1 493 7.77E-198 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 DB29_02260 67658302b0f1ef7f51544428497db773 500 Gene3D G3DSA:1.10.275.10 1 195 1.2E-71 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal DB29_03007 e182000f05c888e482dafbebf6530f5b 236 SUPERFAMILY SSF51261 79 187 1.05E-13 T 14-10-2018 IPR011055 Duplicated hybrid motif DB29_03007 e182000f05c888e482dafbebf6530f5b 236 Pfam PF01551 Peptidase family M23 79 191 4.9E-11 T 14-10-2018 IPR016047 Peptidase M23 DB29_03007 e182000f05c888e482dafbebf6530f5b 236 Gene3D G3DSA:2.70.70.10 34 221 9.5E-19 T 14-10-2018 IPR011055 Duplicated hybrid motif DB29_04077 05435cb6ce92f225689a0b9a52675160 412 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 261 403 3.3E-37 T 14-10-2018 IPR008136 CinA, C-terminal DB29_04077 05435cb6ce92f225689a0b9a52675160 412 Gene3D G3DSA:3.90.950.20 247 408 4.4E-46 T 14-10-2018 IPR036653 CinA-like, C-terminal DB29_04077 05435cb6ce92f225689a0b9a52675160 412 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 1 161 2.7E-31 T 14-10-2018 IPR001453 MoaB/Mog domain DB29_04077 05435cb6ce92f225689a0b9a52675160 412 SUPERFAMILY SSF142433 245 405 1.28E-43 T 14-10-2018 IPR036653 CinA-like, C-terminal DB29_04077 05435cb6ce92f225689a0b9a52675160 412 Pfam PF02464 Competence-damaged protein 252 404 1.6E-45 T 14-10-2018 IPR008136 CinA, C-terminal DB29_04077 05435cb6ce92f225689a0b9a52675160 412 Hamap MF_00226_B Putative competence-damage inducible protein [cinA]. 1 412 158.625 T 14-10-2018 IPR008135 Competence-induced protein CinA DB29_04077 05435cb6ce92f225689a0b9a52675160 412 SUPERFAMILY SSF53218 2 201 1.83E-40 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily DB29_04077 05435cb6ce92f225689a0b9a52675160 412 SMART SM00852 1 167 8.7E-41 T 14-10-2018 IPR001453 MoaB/Mog domain DB29_04077 05435cb6ce92f225689a0b9a52675160 412 TIGRFAM TIGR00200 cinA_nterm: competence/damage-inducible protein CinA N-terminal domain 1 407 7.9E-141 T 14-10-2018 IPR008135 Competence-induced protein CinA DB29_04077 05435cb6ce92f225689a0b9a52675160 412 Gene3D G3DSA:3.40.980.10 1 166 7.2E-53 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily DB29_04077 05435cb6ce92f225689a0b9a52675160 412 Pfam PF00994 Probable molybdopterin binding domain 2 164 9.5E-36 T 14-10-2018 IPR001453 MoaB/Mog domain DB29_04077 05435cb6ce92f225689a0b9a52675160 412 PIRSF PIRSF006728 1 411 7.4E-151 T 14-10-2018 IPR008135 Competence-induced protein CinA DB29_02270 435f2bf067367f234eeac940fc7699f5 500 Gene3D G3DSA:1.20.1730.10 8 499 2.9E-94 T 14-10-2018 IPR038377 Sodium/glucose symporter superfamily DB29_02270 435f2bf067367f234eeac940fc7699f5 500 TIGRFAM TIGR02121 Na_Pro_sym: sodium/proline symporter 6 494 5.4E-208 T 14-10-2018 IPR011851 Sodium/proline symporter GO:0005298|GO:0006814|GO:0015824|GO:0016021|GO:0031402 DB29_02270 435f2bf067367f234eeac940fc7699f5 500 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 35 436 1.2E-93 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 DB29_02270 435f2bf067367f234eeac940fc7699f5 500 Pfam PF00474 Sodium:solute symporter family 35 436 1.2E-99 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 DB29_02270 435f2bf067367f234eeac940fc7699f5 500 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 157 182 - T 14-10-2018 IPR018212 Sodium/solute symporter, conserved site DB29_03922 1490e38cf5c4eeddbfd50dec76dfdcc9 237 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 84 97 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DB29_03922 1490e38cf5c4eeddbfd50dec76dfdcc9 237 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 203 229 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DB29_03922 1490e38cf5c4eeddbfd50dec76dfdcc9 237 SUPERFAMILY SSF88946 24 130 2.2E-34 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 DB29_03922 1490e38cf5c4eeddbfd50dec76dfdcc9 237 SUPERFAMILY SSF88659 141 233 2.24E-21 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like DB29_03922 1490e38cf5c4eeddbfd50dec76dfdcc9 237 Gene3D G3DSA:1.10.10.10 166 237 1.6E-12 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_03922 1490e38cf5c4eeddbfd50dec76dfdcc9 237 TIGRFAM TIGR02835 spore_sigmaE: RNA polymerase sigma-E factor 5 237 4.4E-133 T 14-10-2018 IPR014200 RNA polymerase sigma-E type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DB29_03922 1490e38cf5c4eeddbfd50dec76dfdcc9 237 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 58 232 4.5E-35 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 DB29_03922 1490e38cf5c4eeddbfd50dec76dfdcc9 237 Gene3D G3DSA:1.20.120.1810 26 129 2.1E-24 T 14-10-2018 DB29_03922 1490e38cf5c4eeddbfd50dec76dfdcc9 237 PRINTS PR00046 Major sigma-70 factor signature 203 218 4.9E-12 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DB29_03922 1490e38cf5c4eeddbfd50dec76dfdcc9 237 PRINTS PR00046 Major sigma-70 factor signature 84 97 4.9E-12 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DB29_03922 1490e38cf5c4eeddbfd50dec76dfdcc9 237 PRINTS PR00046 Major sigma-70 factor signature 182 194 4.9E-12 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DB29_03922 1490e38cf5c4eeddbfd50dec76dfdcc9 237 PRINTS PR00046 Major sigma-70 factor signature 218 229 4.9E-12 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DB29_03922 1490e38cf5c4eeddbfd50dec76dfdcc9 237 PIRSF PIRSF000770 3 237 1.6E-76 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DB29_03922 1490e38cf5c4eeddbfd50dec76dfdcc9 237 Pfam PF04545 Sigma-70, region 4 178 231 2.9E-16 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 DB29_03922 1490e38cf5c4eeddbfd50dec76dfdcc9 237 Pfam PF04542 Sigma-70 region 2 60 129 1.4E-18 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 DB29_00185 fcba8efbda5fc615386bbf073a62f41a 301 Gene3D G3DSA:3.40.50.720 1 163 5.1E-51 T 14-10-2018 DB29_00185 fcba8efbda5fc615386bbf073a62f41a 301 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 5 18 - T 14-10-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 DB29_00185 fcba8efbda5fc615386bbf073a62f41a 301 SUPERFAMILY SSF48179 166 288 4.65E-33 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 DB29_00185 fcba8efbda5fc615386bbf073a62f41a 301 Gene3D G3DSA:1.10.1040.10 165 294 9.2E-37 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 DB29_00185 fcba8efbda5fc615386bbf073a62f41a 301 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 2 160 3.5E-40 T 14-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 DB29_00185 fcba8efbda5fc615386bbf073a62f41a 301 PIRSF PIRSF000103 1 292 1.4E-74 T 14-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 DB29_00185 fcba8efbda5fc615386bbf073a62f41a 301 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 167 282 3.4E-29 T 14-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 DB29_00185 fcba8efbda5fc615386bbf073a62f41a 301 SUPERFAMILY SSF51735 2 159 4.28E-38 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_02240 fa42e9758181f0ed8375b272a1e5f0de 446 PRINTS PR00113 Alkaline phosphatase signature 45 65 2.0E-30 T 14-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 DB29_02240 fa42e9758181f0ed8375b272a1e5f0de 446 PRINTS PR00113 Alkaline phosphatase signature 252 281 2.0E-30 T 14-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 DB29_02240 fa42e9758181f0ed8375b272a1e5f0de 446 PRINTS PR00113 Alkaline phosphatase signature 131 151 2.0E-30 T 14-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 DB29_02240 fa42e9758181f0ed8375b272a1e5f0de 446 PRINTS PR00113 Alkaline phosphatase signature 176 186 2.0E-30 T 14-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 DB29_02240 fa42e9758181f0ed8375b272a1e5f0de 446 ProSitePatterns PS00123 Alkaline phosphatase active site. 94 102 - T 14-10-2018 IPR018299 Alkaline phosphatase, active site GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 DB29_02240 fa42e9758181f0ed8375b272a1e5f0de 446 SUPERFAMILY SSF53649 39 446 5.63E-121 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 DB29_02240 fa42e9758181f0ed8375b272a1e5f0de 446 Pfam PF00245 Alkaline phosphatase 45 445 6.1E-101 T 14-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 DB29_02240 fa42e9758181f0ed8375b272a1e5f0de 446 Gene3D G3DSA:3.40.720.10 46 421 2.8E-125 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 DB29_02240 fa42e9758181f0ed8375b272a1e5f0de 446 Gene3D G3DSA:1.10.1200.140 357 419 2.8E-125 T 14-10-2018 DB29_02240 fa42e9758181f0ed8375b272a1e5f0de 446 SMART SM00098 46 446 1.5E-95 T 14-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 DB29_00940 5c33e9b13b86bb21eeced45d39ac576f 309 Pfam PF13732 Domain of unknown function (DUF4162) 215 302 2.4E-6 T 14-10-2018 IPR025302 Domain of unknown function DUF4162 DB29_00940 5c33e9b13b86bb21eeced45d39ac576f 309 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB29_00940 5c33e9b13b86bb21eeced45d39ac576f 309 SMART SM00382 26 210 6.5E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_00940 5c33e9b13b86bb21eeced45d39ac576f 309 Pfam PF00005 ABC transporter 17 160 7.7E-37 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB29_00940 5c33e9b13b86bb21eeced45d39ac576f 309 SUPERFAMILY SSF52540 2 221 5.12E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_00940 5c33e9b13b86bb21eeced45d39ac576f 309 Gene3D G3DSA:3.40.50.300 1 237 3.9E-72 T 14-10-2018 DB29_03532 5ac88e81b091702e1e0c81a331323f0b 584 Pfam PF00224 Pyruvate kinase, barrel domain 1 342 1.9E-157 T 14-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DB29_03532 5ac88e81b091702e1e0c81a331323f0b 584 SUPERFAMILY SSF50800 70 165 5.41E-28 T 14-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily DB29_03532 5ac88e81b091702e1e0c81a331323f0b 584 Gene3D G3DSA:2.40.33.10 71 165 1.3E-151 T 14-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DB29_03532 5ac88e81b091702e1e0c81a331323f0b 584 SUPERFAMILY SSF52009 464 581 3.14E-29 T 14-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 DB29_03532 5ac88e81b091702e1e0c81a331323f0b 584 Gene3D G3DSA:3.20.20.60 4 330 1.3E-151 T 14-10-2018 DB29_03532 5ac88e81b091702e1e0c81a331323f0b 584 PRINTS PR01050 Pyruvate kinase family signature 292 310 9.7E-81 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DB29_03532 5ac88e81b091702e1e0c81a331323f0b 584 PRINTS PR01050 Pyruvate kinase family signature 242 266 9.7E-81 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DB29_03532 5ac88e81b091702e1e0c81a331323f0b 584 PRINTS PR01050 Pyruvate kinase family signature 311 327 9.7E-81 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DB29_03532 5ac88e81b091702e1e0c81a331323f0b 584 PRINTS PR01050 Pyruvate kinase family signature 267 291 9.7E-81 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DB29_03532 5ac88e81b091702e1e0c81a331323f0b 584 PRINTS PR01050 Pyruvate kinase family signature 59 75 9.7E-81 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DB29_03532 5ac88e81b091702e1e0c81a331323f0b 584 PRINTS PR01050 Pyruvate kinase family signature 184 198 9.7E-81 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DB29_03532 5ac88e81b091702e1e0c81a331323f0b 584 PRINTS PR01050 Pyruvate kinase family signature 215 241 9.7E-81 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DB29_03532 5ac88e81b091702e1e0c81a331323f0b 584 SUPERFAMILY SSF52935 321 471 1.96E-44 T 14-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DB29_03532 5ac88e81b091702e1e0c81a331323f0b 584 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 2 470 2.2E-193 T 14-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DB29_03532 5ac88e81b091702e1e0c81a331323f0b 584 SUPERFAMILY SSF51621 1 340 6.28E-104 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 DB29_03532 5ac88e81b091702e1e0c81a331323f0b 584 Gene3D G3DSA:3.40.1380.20 338 471 6.8E-47 T 14-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DB29_03532 5ac88e81b091702e1e0c81a331323f0b 584 Pfam PF00391 PEP-utilising enzyme, mobile domain 503 574 8.3E-21 T 14-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 DB29_03532 5ac88e81b091702e1e0c81a331323f0b 584 Pfam PF02887 Pyruvate kinase, alpha/beta domain 357 469 6.2E-38 T 14-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 DB29_03532 5ac88e81b091702e1e0c81a331323f0b 584 Gene3D G3DSA:3.50.30.10 473 584 7.9E-33 T 14-10-2018 DB29_03582 ba53f9cc62664259201f080be5e79c9c 256 Pfam PF01012 Electron transfer flavoprotein domain 23 205 1.0E-50 T 14-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 DB29_03582 ba53f9cc62664259201f080be5e79c9c 256 ProSitePatterns PS01065 Electron transfer flavoprotein beta-subunit signature. 154 174 - T 14-10-2018 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 DB29_03582 ba53f9cc62664259201f080be5e79c9c 256 Gene3D G3DSA:3.40.50.620 1 255 3.5E-85 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DB29_03582 ba53f9cc62664259201f080be5e79c9c 256 SMART SM00893 21 210 8.5E-63 T 14-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 DB29_03582 ba53f9cc62664259201f080be5e79c9c 256 PIRSF PIRSF000090 1 256 4.0E-78 T 14-10-2018 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 DB29_03582 ba53f9cc62664259201f080be5e79c9c 256 SUPERFAMILY SSF52402 1 250 1.81E-75 T 14-10-2018 DB29_02075 07bab991fa9b29e524ecec19e01a54d8 366 Gene3D G3DSA:3.40.50.300 4 281 2.0E-157 T 14-10-2018 DB29_02075 07bab991fa9b29e524ecec19e01a54d8 366 Pfam PF06071 Protein of unknown function (DUF933) 282 365 5.9E-41 T 14-10-2018 IPR013029 YchF, C-terminal domain Reactome: R-HSA-114608 DB29_02075 07bab991fa9b29e524ecec19e01a54d8 366 Gene3D G3DSA:1.10.150.300 113 200 2.0E-157 T 14-10-2018 IPR023192 TGS-like domain superfamily Reactome: R-HSA-114608 DB29_02075 07bab991fa9b29e524ecec19e01a54d8 366 Gene3D G3DSA:3.10.20.30 48 364 2.0E-157 T 14-10-2018 IPR012675 Beta-grasp domain superfamily DB29_02075 07bab991fa9b29e524ecec19e01a54d8 366 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 3 366 3.3E-157 T 14-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 DB29_02075 07bab991fa9b29e524ecec19e01a54d8 366 SUPERFAMILY SSF81271 282 363 5.23E-37 T 14-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 DB29_02075 07bab991fa9b29e524ecec19e01a54d8 366 PIRSF PIRSF006641 1 366 8.0E-164 T 14-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 DB29_02075 07bab991fa9b29e524ecec19e01a54d8 366 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 366 46.129 T 14-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 DB29_02075 07bab991fa9b29e524ecec19e01a54d8 366 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 3.1E-36 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 DB29_02075 07bab991fa9b29e524ecec19e01a54d8 366 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 3.1E-36 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 DB29_02075 07bab991fa9b29e524ecec19e01a54d8 366 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 3.1E-36 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 DB29_02075 07bab991fa9b29e524ecec19e01a54d8 366 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 3.1E-36 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 DB29_02075 07bab991fa9b29e524ecec19e01a54d8 366 SUPERFAMILY SSF52540 4 304 4.71E-88 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_02075 07bab991fa9b29e524ecec19e01a54d8 366 Pfam PF01926 50S ribosome-binding GTPase 6 115 1.2E-23 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 DB29_02361 6fec6c9ac1bbc23beea5228ed3cfd96a 262 SUPERFAMILY SSF117143 89 207 1.18E-9 T 14-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like DB29_02361 6fec6c9ac1bbc23beea5228ed3cfd96a 262 Pfam PF00460 Flagella basal body rod protein 6 34 1.9E-8 T 14-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 DB29_02361 6fec6c9ac1bbc23beea5228ed3cfd96a 262 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 10 30 - T 14-10-2018 IPR019776 Flagellar basal body rod protein, conserved site DB29_02361 6fec6c9ac1bbc23beea5228ed3cfd96a 262 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 185 259 1.5E-13 T 14-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain DB29_02361 6fec6c9ac1bbc23beea5228ed3cfd96a 262 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 5 137 8.7E-25 T 14-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G DB29_02133 7c4f668175f1842ae0d6a3588eade441 226 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 73 6.2E-17 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DB29_02133 7c4f668175f1842ae0d6a3588eade441 226 Gene3D G3DSA:1.10.10.10 7 74 1.0E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_02133 7c4f668175f1842ae0d6a3588eade441 226 SMART SM00895 83 207 2.1E-16 T 14-10-2018 IPR011711 GntR, C-terminal DB29_02133 7c4f668175f1842ae0d6a3588eade441 226 Pfam PF07729 FCD domain 87 206 1.2E-22 T 14-10-2018 IPR011711 GntR, C-terminal DB29_02133 7c4f668175f1842ae0d6a3588eade441 226 SUPERFAMILY SSF48008 80 206 7.85E-21 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DB29_02133 7c4f668175f1842ae0d6a3588eade441 226 SMART SM00345 15 73 1.2E-15 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DB29_02133 7c4f668175f1842ae0d6a3588eade441 226 SUPERFAMILY SSF46785 8 77 1.97E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_02133 7c4f668175f1842ae0d6a3588eade441 226 Gene3D G3DSA:1.20.120.530 77 211 5.3E-22 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DB29_02830 9c81b433c072135758cae5084185ed5d 418 Gene3D G3DSA:3.40.190.10 18 412 7.8E-90 T 14-10-2018 DB29_02830 9c81b433c072135758cae5084185ed5d 418 Pfam PF13416 Bacterial extracellular solute-binding protein 47 340 2.1E-39 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein DB29_02830 9c81b433c072135758cae5084185ed5d 418 SUPERFAMILY SSF53850 31 408 3.66E-76 T 14-10-2018 DB29_02603 d086dca01f2ae9be36d96db017deac01 162 Gene3D G3DSA:3.30.1330.80 7 158 7.3E-25 T 14-10-2018 DB29_02603 d086dca01f2ae9be36d96db017deac01 162 SUPERFAMILY SSF117856 14 151 4.45E-26 T 14-10-2018 DB29_02603 d086dca01f2ae9be36d96db017deac01 162 Pfam PF03479 Domain of unknown function (DUF296) 16 133 3.9E-23 T 14-10-2018 IPR005175 PPC domain DB29_03995 5c18731cf38c8fcc73067029817ba13c 161 SUPERFAMILY SSF160544 7 84 8.37E-15 T 14-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal DB29_03995 5c18731cf38c8fcc73067029817ba13c 161 Gene3D G3DSA:3.40.1690.10 3 84 2.8E-15 T 14-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal DB29_03995 5c18731cf38c8fcc73067029817ba13c 161 Pfam PF01312 FlhB HrpN YscU SpaS Family 9 79 6.6E-11 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 DB29_03602 04a84e261b12dfcd773cb8c2f70e2520 169 SUPERFAMILY SSF56300 1 157 5.52E-41 T 14-10-2018 DB29_03602 04a84e261b12dfcd773cb8c2f70e2520 169 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 1 144 2.4E-32 T 14-10-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 DB29_03602 04a84e261b12dfcd773cb8c2f70e2520 169 Gene3D G3DSA:3.60.21.10 1 169 2.5E-45 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like DB29_03602 04a84e261b12dfcd773cb8c2f70e2520 169 TIGRFAM TIGR00040 yfcE: phosphodiesterase, MJ0936 family 1 149 2.2E-30 T 14-10-2018 IPR000979 Phosphodiesterase MJ0936/Vps29 Reactome: R-HSA-3238698 DB29_03770 53fa7ed65e7cf0c332037e1296f45368 559 Gene3D G3DSA:3.40.50.10810 61 261 5.7E-42 T 14-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily DB29_03770 53fa7ed65e7cf0c332037e1296f45368 559 SMART SM00487 56 232 7.7E-30 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DB29_03770 53fa7ed65e7cf0c332037e1296f45368 559 SUPERFAMILY SSF52540 30 259 6.63E-46 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_03770 53fa7ed65e7cf0c332037e1296f45368 559 Pfam PF00271 Helicase conserved C-terminal domain 354 460 2.3E-20 T 14-10-2018 IPR001650 Helicase, C-terminal DB29_03770 53fa7ed65e7cf0c332037e1296f45368 559 Gene3D G3DSA:3.40.50.300 304 492 2.8E-44 T 14-10-2018 DB29_03770 53fa7ed65e7cf0c332037e1296f45368 559 SMART SM00490 380 460 7.8E-18 T 14-10-2018 IPR001650 Helicase, C-terminal DB29_03770 53fa7ed65e7cf0c332037e1296f45368 559 SUPERFAMILY SSF52540 168 513 4.94E-54 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_03770 53fa7ed65e7cf0c332037e1296f45368 559 Pfam PF00176 SNF2 family N-terminal domain 77 305 6.7E-36 T 14-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 DB29_03042 924a4b5e7e576689a8e5244f178ecf8c 139 Pfam PF06923 Glucitol operon activator protein (GutM) 3 110 4.2E-28 T 14-10-2018 IPR009693 Glucitol operon activator DB29_00746 f657e4ec7068e8a07c48f63168556cb8 329 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 234 319 2.3E-29 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DB29_00746 f657e4ec7068e8a07c48f63168556cb8 329 Gene3D G3DSA:3.40.50.300 3 327 1.4E-103 T 14-10-2018 DB29_00746 f657e4ec7068e8a07c48f63168556cb8 329 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 236 300 1.1E-20 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DB29_00746 f657e4ec7068e8a07c48f63168556cb8 329 SUPERFAMILY SSF52540 5 255 5.67E-69 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_00746 f657e4ec7068e8a07c48f63168556cb8 329 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB29_00746 f657e4ec7068e8a07c48f63168556cb8 329 Pfam PF00005 ABC transporter 26 184 1.6E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB29_00746 f657e4ec7068e8a07c48f63168556cb8 329 SMART SM00382 34 242 3.1E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_03244 f695821e25fa86a3e2338e3b51625d76 213 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 3 14 1.9E-8 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DB29_03244 f695821e25fa86a3e2338e3b51625d76 213 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 94 107 1.9E-8 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DB29_03244 f695821e25fa86a3e2338e3b51625d76 213 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 125 141 1.9E-8 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DB29_03244 f695821e25fa86a3e2338e3b51625d76 213 Gene3D G3DSA:1.10.150.240 18 80 3.6E-53 T 14-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 DB29_03244 f695821e25fa86a3e2338e3b51625d76 213 SUPERFAMILY SSF56784 1 211 2.94E-58 T 14-10-2018 IPR036412 HAD-like superfamily DB29_03244 f695821e25fa86a3e2338e3b51625d76 213 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 76 181 9.3E-14 T 14-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 DB29_03244 f695821e25fa86a3e2338e3b51625d76 213 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 53 175 3.8E-11 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DB29_03244 f695821e25fa86a3e2338e3b51625d76 213 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 59 181 5.7E-13 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DB29_03244 f695821e25fa86a3e2338e3b51625d76 213 Gene3D G3DSA:3.40.50.1000 6 185 3.6E-53 T 14-10-2018 IPR023214 HAD superfamily DB29_03244 f695821e25fa86a3e2338e3b51625d76 213 Hamap MF_01250 Pyrophosphatase PpaX [ppaX]. 1 213 41.367 T 14-10-2018 IPR023733 Pyrophosphatase PpaX GO:0016462 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 DB29_03244 f695821e25fa86a3e2338e3b51625d76 213 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 181 4.3E-54 T 14-10-2018 DB29_00445 994e765a27c227645ae518a6612008da 337 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 134 215 4.4E-9 T 14-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 DB29_00445 994e765a27c227645ae518a6612008da 337 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 5 122 3.6E-30 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 DB29_00445 994e765a27c227645ae518a6612008da 337 SUPERFAMILY SSF55347 131 280 6.7E-30 T 14-10-2018 DB29_00445 994e765a27c227645ae518a6612008da 337 Gene3D G3DSA:3.40.50.720 7 318 6.3E-91 T 14-10-2018 DB29_00445 994e765a27c227645ae518a6612008da 337 Gene3D G3DSA:3.30.360.10 127 334 6.3E-91 T 14-10-2018 DB29_00445 994e765a27c227645ae518a6612008da 337 SUPERFAMILY SSF51735 4 153 3.21E-50 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_00324 abd756309efd1a031c5400700d38b8f2 303 Gene3D G3DSA:3.30.300.20 188 302 2.8E-44 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta DB29_00324 abd756309efd1a031c5400700d38b8f2 303 Gene3D G3DSA:3.40.50.300 5 187 1.9E-50 T 14-10-2018 DB29_00324 abd756309efd1a031c5400700d38b8f2 303 Pfam PF01926 50S ribosome-binding GTPase 13 127 9.2E-25 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 DB29_00324 abd756309efd1a031c5400700d38b8f2 303 TIGRFAM TIGR00436 era: GTP-binding protein Era 11 281 5.3E-107 T 14-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB29_00324 abd756309efd1a031c5400700d38b8f2 303 SUPERFAMILY SSF52540 13 207 7.71E-51 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_00324 abd756309efd1a031c5400700d38b8f2 303 Pfam PF07650 KH domain 210 287 7.4E-22 T 14-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB29_00324 abd756309efd1a031c5400700d38b8f2 303 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 13 33 1.2E-5 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 DB29_00324 abd756309efd1a031c5400700d38b8f2 303 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 80 98 1.2E-5 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 DB29_00324 abd756309efd1a031c5400700d38b8f2 303 SUPERFAMILY SSF54814 184 299 2.94E-43 T 14-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 DB29_00324 abd756309efd1a031c5400700d38b8f2 303 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 11 169 1.2E-29 T 14-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 DB29_00324 abd756309efd1a031c5400700d38b8f2 303 Hamap MF_00367 GTPase Era [era]. 8 298 39.008 T 14-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB29_02155 c62559a0cc18c472d2f06111fb70e87a 237 Pfam PF01144 Coenzyme A transferase 7 215 1.0E-76 T 14-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 DB29_02155 c62559a0cc18c472d2f06111fb70e87a 237 Gene3D G3DSA:3.40.1080.10 1 226 3.9E-99 T 14-10-2018 DB29_02155 c62559a0cc18c472d2f06111fb70e87a 237 ProSitePatterns PS01273 Coenzyme A transferases signature 1. 17 32 - T 14-10-2018 IPR004163 Coenzyme A transferase binding site GO:0008410 Reactome: R-HSA-77108 DB29_02155 c62559a0cc18c472d2f06111fb70e87a 237 SUPERFAMILY SSF100950 2 228 6.58E-90 T 14-10-2018 IPR037171 NagB/RpiA transferase-like DB29_02155 c62559a0cc18c472d2f06111fb70e87a 237 SMART SM00882 5 216 6.9E-93 T 14-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 DB29_02155 c62559a0cc18c472d2f06111fb70e87a 237 TIGRFAM TIGR02429 pcaI_scoA_fam: 3-oxoacid CoA-transferase, A subunit 1 214 4.1E-81 T 14-10-2018 IPR012792 3-oxoacid CoA-transferase, subunit A GO:0008410 Reactome: R-HSA-77108 DB29_00498 c49b3f3ff9b69b9d70a79a99102299d6 346 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 181 202 - T 14-10-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 DB29_00498 c49b3f3ff9b69b9d70a79a99102299d6 346 Hamap MF_01145 Foldase protein PrsA [prsA]. 2 294 16.586 T 14-10-2018 IPR023059 Foldase protein PrsA GO:0003755 DB29_00498 c49b3f3ff9b69b9d70a79a99102299d6 346 SUPERFAMILY SSF54534 144 242 5.69E-34 T 14-10-2018 DB29_00498 c49b3f3ff9b69b9d70a79a99102299d6 346 Pfam PF13616 PPIC-type PPIASE domain 147 243 1.5E-28 T 14-10-2018 DB29_00498 c49b3f3ff9b69b9d70a79a99102299d6 346 Gene3D G3DSA:3.10.50.40 154 248 9.9E-39 T 14-10-2018 DB29_00498 c49b3f3ff9b69b9d70a79a99102299d6 346 Gene3D G3DSA:1.10.4030.30 47 261 9.9E-39 T 14-10-2018 DB29_00498 c49b3f3ff9b69b9d70a79a99102299d6 346 SUPERFAMILY SSF109998 34 182 2.08E-14 T 14-10-2018 IPR027304 Trigger factor/SurA domain superfamily DB29_03261 045a9c699fb0f77bb5f175fe2ae72f18 296 Pfam PF03668 P-loop ATPase protein family 6 291 9.2E-119 T 14-10-2018 IPR005337 RapZ-like family GO:0005524 DB29_03261 045a9c699fb0f77bb5f175fe2ae72f18 296 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 6 290 41.295 T 14-10-2018 IPR005337 RapZ-like family GO:0005524 DB29_03261 045a9c699fb0f77bb5f175fe2ae72f18 296 SUPERFAMILY SSF52540 8 163 6.58E-12 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_03261 045a9c699fb0f77bb5f175fe2ae72f18 296 Gene3D G3DSA:3.40.50.300 2 176 3.3E-5 T 14-10-2018 DB29_03261 045a9c699fb0f77bb5f175fe2ae72f18 296 PIRSF PIRSF005052 6 293 2.4E-108 T 14-10-2018 IPR005337 RapZ-like family GO:0005524 DB29_00066 413d157c813a0896ef1ebe4e630b2e5c 166 Gene3D G3DSA:3.40.630.30 1 158 4.4E-33 T 14-10-2018 DB29_00066 413d157c813a0896ef1ebe4e630b2e5c 166 SUPERFAMILY SSF55729 1 155 3.6E-26 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase DB29_00066 413d157c813a0896ef1ebe4e630b2e5c 166 Pfam PF13673 Acetyltransferase (GNAT) domain 36 139 5.0E-15 T 14-10-2018 IPR000182 GNAT domain DB29_03181 3317934e1246fef1e6eab020fd0b0dd3 430 SUPERFAMILY SSF51445 127 424 3.4E-36 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily DB29_03181 3317934e1246fef1e6eab020fd0b0dd3 430 SMART SM00636 103 412 1.6E-15 T 14-10-2018 IPR011583 Chitinase II GO:0008061 DB29_03181 3317934e1246fef1e6eab020fd0b0dd3 430 Gene3D G3DSA:3.10.50.10 324 383 1.3E-96 T 14-10-2018 IPR029070 Chitinase insertion domain superfamily DB29_03181 3317934e1246fef1e6eab020fd0b0dd3 430 Pfam PF01476 LysM domain 4 47 6.7E-13 T 14-10-2018 IPR018392 LysM domain DB29_03181 3317934e1246fef1e6eab020fd0b0dd3 430 Pfam PF01476 LysM domain 53 96 6.8E-9 T 14-10-2018 IPR018392 LysM domain DB29_03181 3317934e1246fef1e6eab020fd0b0dd3 430 SMART SM00257 52 96 4.3E-10 T 14-10-2018 IPR018392 LysM domain DB29_03181 3317934e1246fef1e6eab020fd0b0dd3 430 SMART SM00257 3 47 3.8E-10 T 14-10-2018 IPR018392 LysM domain DB29_03181 3317934e1246fef1e6eab020fd0b0dd3 430 SUPERFAMILY SSF54106 51 96 1.57E-10 T 14-10-2018 DB29_03181 3317934e1246fef1e6eab020fd0b0dd3 430 Pfam PF00704 Glycosyl hydrolases family 18 189 410 4.4E-16 T 14-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 DB29_03181 3317934e1246fef1e6eab020fd0b0dd3 430 Gene3D G3DSA:3.10.350.10 2 50 1.1E-14 T 14-10-2018 IPR036779 LysM domain superfamily DB29_03181 3317934e1246fef1e6eab020fd0b0dd3 430 Gene3D G3DSA:3.10.350.10 51 107 4.3E-12 T 14-10-2018 IPR036779 LysM domain superfamily DB29_03181 3317934e1246fef1e6eab020fd0b0dd3 430 Gene3D G3DSA:3.20.20.80 130 417 1.3E-96 T 14-10-2018 DB29_03181 3317934e1246fef1e6eab020fd0b0dd3 430 SUPERFAMILY SSF54106 2 47 2.62E-10 T 14-10-2018 DB29_00012 93449f121de10ca4176f8bda3be6ee2c 245 SUPERFAMILY SSF54001 15 232 1.57E-17 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily DB29_00944 a3342eb1e008c85c0c208874cc4821c4 315 SUPERFAMILY SSF53807 38 310 4.32E-50 T 14-10-2018 DB29_00944 a3342eb1e008c85c0c208874cc4821c4 315 Pfam PF01497 Periplasmic binding protein 102 287 1.7E-29 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain DB29_00944 a3342eb1e008c85c0c208874cc4821c4 315 Gene3D G3DSA:3.40.50.1980 23 159 2.9E-25 T 14-10-2018 DB29_00944 a3342eb1e008c85c0c208874cc4821c4 315 Gene3D G3DSA:3.40.50.1980 162 314 5.1E-34 T 14-10-2018 DB29_03324 332c794855de96b80a00865106d6b469 147 Pfam PF01592 NifU-like N terminal domain 10 129 2.5E-30 T 14-10-2018 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 DB29_03324 332c794855de96b80a00865106d6b469 147 SUPERFAMILY SSF82649 3 144 8.63E-51 T 14-10-2018 DB29_03324 332c794855de96b80a00865106d6b469 147 Gene3D G3DSA:3.90.1010.10 2 146 2.5E-57 T 14-10-2018 DB29_03324 332c794855de96b80a00865106d6b469 147 TIGRFAM TIGR01994 SUF_scaf_2: SUF system FeS assembly protein, NifU family 6 141 3.4E-55 T 14-10-2018 DB29_01570 8e0c578b4857b4fb5f66768055682b9b 231 SMART SM00895 103 221 9.7E-19 T 14-10-2018 IPR011711 GntR, C-terminal DB29_01570 8e0c578b4857b4fb5f66768055682b9b 231 Gene3D G3DSA:1.20.120.530 86 228 6.6E-24 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DB29_01570 8e0c578b4857b4fb5f66768055682b9b 231 Pfam PF00392 Bacterial regulatory proteins, gntR family 18 80 1.2E-19 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DB29_01570 8e0c578b4857b4fb5f66768055682b9b 231 SUPERFAMILY SSF46785 11 83 2.04E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_01570 8e0c578b4857b4fb5f66768055682b9b 231 Gene3D G3DSA:1.10.10.10 9 81 5.1E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_01570 8e0c578b4857b4fb5f66768055682b9b 231 Pfam PF07729 FCD domain 104 219 2.2E-22 T 14-10-2018 IPR011711 GntR, C-terminal DB29_01570 8e0c578b4857b4fb5f66768055682b9b 231 SMART SM00345 22 81 1.4E-20 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DB29_01570 8e0c578b4857b4fb5f66768055682b9b 231 SUPERFAMILY SSF48008 99 227 2.28E-23 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DB29_01570 8e0c578b4857b4fb5f66768055682b9b 231 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 55 71 8.1E-8 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DB29_01570 8e0c578b4857b4fb5f66768055682b9b 231 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 41 55 8.1E-8 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DB29_02819 7293c9ef67d290e31621607072f11e3a 699 Gene3D G3DSA:3.40.50.300 61 255 5.2E-67 T 14-10-2018 DB29_02819 7293c9ef67d290e31621607072f11e3a 699 Gene3D G3DSA:1.10.8.60 259 384 2.2E-36 T 14-10-2018 DB29_02819 7293c9ef67d290e31621607072f11e3a 699 Gene3D G3DSA:4.10.860.10 320 371 2.2E-36 T 14-10-2018 DB29_02819 7293c9ef67d290e31621607072f11e3a 699 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 609 680 2.1E-22 T 14-10-2018 IPR019489 Clp ATPase, C-terminal DB29_02819 7293c9ef67d290e31621607072f11e3a 699 SMART SM01086 609 696 1.9E-30 T 14-10-2018 IPR019489 Clp ATPase, C-terminal DB29_02819 7293c9ef67d290e31621607072f11e3a 699 Pfam PF02151 UvrB/uvrC motif 327 361 6.0E-6 T 14-10-2018 IPR001943 UVR domain GO:0005515 DB29_02819 7293c9ef67d290e31621607072f11e3a 699 SUPERFAMILY SSF52540 390 677 1.35E-75 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_02819 7293c9ef67d290e31621607072f11e3a 699 Gene3D G3DSA:1.10.8.60 609 698 5.4E-24 T 14-10-2018 DB29_02819 7293c9ef67d290e31621607072f11e3a 699 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 208 220 - T 14-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 DB29_02819 7293c9ef67d290e31621607072f11e3a 699 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 551 565 6.4E-37 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 DB29_02819 7293c9ef67d290e31621607072f11e3a 699 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 489 507 6.4E-37 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 DB29_02819 7293c9ef67d290e31621607072f11e3a 699 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 518 536 6.4E-37 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 DB29_02819 7293c9ef67d290e31621607072f11e3a 699 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 444 462 6.4E-37 T 14-10-2018 IPR001270 ClpA/B family GO:0005524 DB29_02819 7293c9ef67d290e31621607072f11e3a 699 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 474 492 - T 14-10-2018 IPR028299 ClpA/B, conserved site 2 DB29_02819 7293c9ef67d290e31621607072f11e3a 699 SUPERFAMILY SSF52540 74 375 3.65E-68 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_02819 7293c9ef67d290e31621607072f11e3a 699 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 117 247 2.6E-11 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 DB29_02819 7293c9ef67d290e31621607072f11e3a 699 Gene3D G3DSA:3.40.50.300 393 608 1.2E-80 T 14-10-2018 DB29_02819 7293c9ef67d290e31621607072f11e3a 699 Pfam PF07724 AAA domain (Cdc48 subfamily) 442 602 9.8E-50 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 DB29_02819 7293c9ef67d290e31621607072f11e3a 699 SMART SM00382 440 610 1.1E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_02819 7293c9ef67d290e31621607072f11e3a 699 SMART SM00382 112 256 6.3E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_02359 c95d308224be0cf45039b7ea77262035 334 Gene3D G3DSA:3.90.640.10 178 251 6.1E-125 T 14-10-2018 DB29_02359 c95d308224be0cf45039b7ea77262035 334 Pfam PF06723 MreB/Mbl protein 4 328 1.2E-148 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 DB29_02359 c95d308224be0cf45039b7ea77262035 334 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 61 84 1.2E-56 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 DB29_02359 c95d308224be0cf45039b7ea77262035 334 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 292 318 1.2E-56 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 DB29_02359 c95d308224be0cf45039b7ea77262035 334 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 179 199 1.2E-56 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 DB29_02359 c95d308224be0cf45039b7ea77262035 334 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 124 143 1.2E-56 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 DB29_02359 c95d308224be0cf45039b7ea77262035 334 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 41 59 1.2E-56 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 DB29_02359 c95d308224be0cf45039b7ea77262035 334 Gene3D G3DSA:3.30.420.40 146 309 6.1E-125 T 14-10-2018 DB29_02359 c95d308224be0cf45039b7ea77262035 334 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 2 328 2.9E-132 T 14-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 DB29_02359 c95d308224be0cf45039b7ea77262035 334 Gene3D G3DSA:3.30.420.40 6 319 6.1E-125 T 14-10-2018 DB29_02359 c95d308224be0cf45039b7ea77262035 334 SUPERFAMILY SSF53067 2 140 3.33E-38 T 14-10-2018 DB29_02359 c95d308224be0cf45039b7ea77262035 334 SUPERFAMILY SSF53067 142 326 1.12E-48 T 14-10-2018 DB29_02957 932e0c7a2d7251559dc08d6d9e056ff5 325 SUPERFAMILY SSF109604 4 246 2.9E-48 T 14-10-2018 DB29_02957 932e0c7a2d7251559dc08d6d9e056ff5 325 SMART SM00471 45 160 5.0E-9 T 14-10-2018 IPR003607 HD/PDEase domain DB29_02957 932e0c7a2d7251559dc08d6d9e056ff5 325 Gene3D G3DSA:1.10.3210.10 2 259 7.2E-49 T 14-10-2018 DB29_02957 932e0c7a2d7251559dc08d6d9e056ff5 325 Pfam PF01966 HD domain 49 150 9.7E-10 T 14-10-2018 IPR006674 HD domain DB29_02319 7ef4ba0c4cfeaaaf25481e530603eb4c 321 PIRSF PIRSF004532 1 321 1.3E-151 T 14-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 DB29_02319 7ef4ba0c4cfeaaaf25481e530603eb4c 321 Pfam PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded 3 310 1.3E-146 T 14-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 DB29_02319 7ef4ba0c4cfeaaaf25481e530603eb4c 321 TIGRFAM TIGR00330 glpX: fructose-1,6-bisphosphatase, class II 2 321 1.4E-147 T 14-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 DB29_02319 7ef4ba0c4cfeaaaf25481e530603eb4c 321 Gene3D G3DSA:3.40.190.90 121 285 2.6E-139 T 14-10-2018 DB29_02319 7ef4ba0c4cfeaaaf25481e530603eb4c 321 Gene3D G3DSA:3.30.540.10 5 310 2.6E-139 T 14-10-2018 DB29_02319 7ef4ba0c4cfeaaaf25481e530603eb4c 321 SUPERFAMILY SSF56655 2 313 1.91E-113 T 14-10-2018 DB29_01105 522b6893e0ad884220eb1b32c614cb27 428 Gene3D G3DSA:2.40.340.10 336 404 3.9E-116 T 14-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 DB29_01105 522b6893e0ad884220eb1b32c614cb27 428 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 184 321 1.9E-34 T 14-10-2018 IPR001453 MoaB/Mog domain DB29_01105 522b6893e0ad884220eb1b32c614cb27 428 Gene3D G3DSA:3.40.980.10 182 335 3.9E-116 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily DB29_01105 522b6893e0ad884220eb1b32c614cb27 428 SUPERFAMILY SSF63882 8 180 7.85E-51 T 14-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 DB29_01105 522b6893e0ad884220eb1b32c614cb27 428 Gene3D G3DSA:2.170.190.11 51 148 3.9E-116 T 14-10-2018 DB29_01105 522b6893e0ad884220eb1b32c614cb27 428 SMART SM00852 187 325 1.3E-46 T 14-10-2018 IPR001453 MoaB/Mog domain DB29_01105 522b6893e0ad884220eb1b32c614cb27 428 Gene3D G3DSA:3.90.105.10 27 181 3.9E-116 T 14-10-2018 DB29_01105 522b6893e0ad884220eb1b32c614cb27 428 SUPERFAMILY SSF63867 336 411 1.02E-15 T 14-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 DB29_01105 522b6893e0ad884220eb1b32c614cb27 428 Pfam PF00994 Probable molybdopterin binding domain 187 324 4.7E-28 T 14-10-2018 IPR001453 MoaB/Mog domain DB29_01105 522b6893e0ad884220eb1b32c614cb27 428 Pfam PF03454 MoeA C-terminal region (domain IV) 338 409 1.9E-16 T 14-10-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 DB29_01105 522b6893e0ad884220eb1b32c614cb27 428 Pfam PF03453 MoeA N-terminal region (domain I and II) 9 174 2.3E-39 T 14-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 DB29_01105 522b6893e0ad884220eb1b32c614cb27 428 SUPERFAMILY SSF53218 184 329 5.37E-42 T 14-10-2018 IPR036425 MoaB/Mog-like domain superfamily DB29_03106 3aecca032013f17b4ad0dded7b62c221 206 PIRSF PIRSF000349 1 206 8.6E-80 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DB29_03106 3aecca032013f17b4ad0dded7b62c221 206 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 167 174 - T 14-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DB29_03106 3aecca032013f17b4ad0dded7b62c221 206 Gene3D G3DSA:2.40.500.20 95 206 8.5E-48 T 14-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DB29_03106 3aecca032013f17b4ad0dded7b62c221 206 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 3 90 8.3E-30 T 14-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DB29_03106 3aecca032013f17b4ad0dded7b62c221 206 Gene3D G3DSA:1.10.287.990 21 91 2.4E-31 T 14-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DB29_03106 3aecca032013f17b4ad0dded7b62c221 206 SUPERFAMILY SSF54719 95 205 1.1E-43 T 14-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DB29_03106 3aecca032013f17b4ad0dded7b62c221 206 PRINTS PR01703 Manganese superoxide dismutase signature 165 177 5.1E-26 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DB29_03106 3aecca032013f17b4ad0dded7b62c221 206 PRINTS PR01703 Manganese superoxide dismutase signature 7 18 5.1E-26 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DB29_03106 3aecca032013f17b4ad0dded7b62c221 206 PRINTS PR01703 Manganese superoxide dismutase signature 28 41 5.1E-26 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DB29_03106 3aecca032013f17b4ad0dded7b62c221 206 PRINTS PR01703 Manganese superoxide dismutase signature 74 87 5.1E-26 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DB29_03106 3aecca032013f17b4ad0dded7b62c221 206 PRINTS PR01703 Manganese superoxide dismutase signature 128 136 5.1E-26 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DB29_03106 3aecca032013f17b4ad0dded7b62c221 206 SUPERFAMILY SSF46609 2 92 3.14E-35 T 14-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DB29_03106 3aecca032013f17b4ad0dded7b62c221 206 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 101 199 4.5E-41 T 14-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DB29_02744 3b3335298b88c026fd01f5a948b97b87 432 SUPERFAMILY SSF161098 179 414 1.57E-57 T 14-10-2018 IPR035906 MetI-like superfamily DB29_02744 3b3335298b88c026fd01f5a948b97b87 432 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 216 416 5.0E-21 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DB29_02744 3b3335298b88c026fd01f5a948b97b87 432 Gene3D G3DSA:1.10.3720.10 175 432 4.6E-68 T 14-10-2018 IPR035906 MetI-like superfamily DB29_02744 3b3335298b88c026fd01f5a948b97b87 432 SUPERFAMILY SSF160964 127 182 2.22E-7 T 14-10-2018 DB29_02418 440519b219fde03873b1b95c48381e88 138 Gene3D G3DSA:3.10.490.10 5 130 6.4E-27 T 14-10-2018 DB29_02418 440519b219fde03873b1b95c48381e88 138 SUPERFAMILY SSF110857 7 131 6.28E-26 T 14-10-2018 IPR036568 Gamma-glutamyl cyclotransferase-like superfamily DB29_02418 440519b219fde03873b1b95c48381e88 138 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 9 127 1.2E-19 T 14-10-2018 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like DB29_01045 f07d3a05872b4864645db893cd5110aa 996 Pfam PF04851 Type III restriction enzyme, res subunit 283 484 2.4E-12 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 DB29_01045 f07d3a05872b4864645db893cd5110aa 996 Gene3D G3DSA:3.90.1570.50 101 265 1.5E-13 T 14-10-2018 DB29_01045 f07d3a05872b4864645db893cd5110aa 996 Gene3D G3DSA:3.40.50.300 282 494 2.2E-22 T 14-10-2018 DB29_01045 f07d3a05872b4864645db893cd5110aa 996 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 77 210 1.4E-20 T 14-10-2018 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 DB29_01045 f07d3a05872b4864645db893cd5110aa 996 SUPERFAMILY SSF52540 303 724 2.13E-7 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_01045 f07d3a05872b4864645db893cd5110aa 996 SUPERFAMILY SSF52540 240 507 3.88E-22 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_01045 f07d3a05872b4864645db893cd5110aa 996 Gene3D G3DSA:3.40.50.300 506 729 1.3E-26 T 14-10-2018 DB29_01045 f07d3a05872b4864645db893cd5110aa 996 SMART SM00487 278 506 8.5E-11 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DB29_03516 dabdf4bf2e1cc21aa0a627b39130f3ec 250 SUPERFAMILY SSF51735 2 243 8.86E-61 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_03516 dabdf4bf2e1cc21aa0a627b39130f3ec 250 Gene3D G3DSA:3.40.50.720 1 250 3.2E-67 T 14-10-2018 DB29_03516 dabdf4bf2e1cc21aa0a627b39130f3ec 250 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 11 243 4.1E-48 T 14-10-2018 DB29_03516 dabdf4bf2e1cc21aa0a627b39130f3ec 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 1.5E-27 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_03516 dabdf4bf2e1cc21aa0a627b39130f3ec 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 1.5E-27 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_03516 dabdf4bf2e1cc21aa0a627b39130f3ec 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 76 87 1.5E-27 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_03516 dabdf4bf2e1cc21aa0a627b39130f3ec 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 1.5E-27 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_03516 dabdf4bf2e1cc21aa0a627b39130f3ec 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 1.5E-27 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_03516 dabdf4bf2e1cc21aa0a627b39130f3ec 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 1.5E-27 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_02848 e89cb88ccbfb8e04e3ab8d8f394dfce6 818 Pfam PF05031 Iron Transport-associated domain 602 715 9.8E-35 T 14-10-2018 IPR006635 NEAT domain DB29_02848 e89cb88ccbfb8e04e3ab8d8f394dfce6 818 Pfam PF05031 Iron Transport-associated domain 420 534 1.5E-30 T 14-10-2018 IPR006635 NEAT domain DB29_02848 e89cb88ccbfb8e04e3ab8d8f394dfce6 818 Pfam PF05031 Iron Transport-associated domain 215 325 4.8E-27 T 14-10-2018 IPR006635 NEAT domain DB29_02848 e89cb88ccbfb8e04e3ab8d8f394dfce6 818 Pfam PF05031 Iron Transport-associated domain 36 149 1.9E-34 T 14-10-2018 IPR006635 NEAT domain DB29_02848 e89cb88ccbfb8e04e3ab8d8f394dfce6 818 TIGRFAM TIGR03063 srtB_target: sortase B cell surface sorting signal 783 811 2.9E-13 T 14-10-2018 IPR017502 Sortase B cell surface sorting signal DB29_02848 e89cb88ccbfb8e04e3ab8d8f394dfce6 818 SUPERFAMILY SSF158911 600 726 1.44E-41 T 14-10-2018 IPR037250 NEAT domain superfamily DB29_02848 e89cb88ccbfb8e04e3ab8d8f394dfce6 818 Gene3D G3DSA:2.60.40.1850 592 719 1.3E-41 T 14-10-2018 DB29_02848 e89cb88ccbfb8e04e3ab8d8f394dfce6 818 Gene3D G3DSA:2.60.40.1850 201 337 1.7E-32 T 14-10-2018 DB29_02848 e89cb88ccbfb8e04e3ab8d8f394dfce6 818 Gene3D G3DSA:2.60.40.1850 21 153 4.2E-43 T 14-10-2018 DB29_02848 e89cb88ccbfb8e04e3ab8d8f394dfce6 818 SUPERFAMILY SSF158911 20 161 6.93E-43 T 14-10-2018 IPR037250 NEAT domain superfamily DB29_02848 e89cb88ccbfb8e04e3ab8d8f394dfce6 818 SUPERFAMILY SSF158911 205 344 8.11E-32 T 14-10-2018 IPR037250 NEAT domain superfamily DB29_02848 e89cb88ccbfb8e04e3ab8d8f394dfce6 818 Gene3D G3DSA:2.60.40.1850 423 544 1.9E-37 T 14-10-2018 DB29_02848 e89cb88ccbfb8e04e3ab8d8f394dfce6 818 SUPERFAMILY SSF158911 419 547 1.44E-38 T 14-10-2018 IPR037250 NEAT domain superfamily DB29_02848 e89cb88ccbfb8e04e3ab8d8f394dfce6 818 SMART SM00725 421 541 2.1E-38 T 14-10-2018 IPR006635 NEAT domain DB29_02848 e89cb88ccbfb8e04e3ab8d8f394dfce6 818 SMART SM00725 604 721 1.8E-40 T 14-10-2018 IPR006635 NEAT domain DB29_02848 e89cb88ccbfb8e04e3ab8d8f394dfce6 818 SMART SM00725 36 158 4.1E-39 T 14-10-2018 IPR006635 NEAT domain DB29_02848 e89cb88ccbfb8e04e3ab8d8f394dfce6 818 SMART SM00725 215 339 1.0E-23 T 14-10-2018 IPR006635 NEAT domain DB29_04156 76488bee1e5ab776eb9f12481283b366 459 TIGRFAM TIGR00835 agcS: amino acid carrier protein 15 438 6.2E-156 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 DB29_04156 76488bee1e5ab776eb9f12481283b366 459 Pfam PF01235 Sodium:alanine symporter family 55 447 1.7E-150 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 DB29_04156 76488bee1e5ab776eb9f12481283b366 459 PRINTS PR00175 Sodium/alanine symporter signature 184 202 3.9E-56 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 DB29_04156 76488bee1e5ab776eb9f12481283b366 459 PRINTS PR00175 Sodium/alanine symporter signature 408 428 3.9E-56 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 DB29_04156 76488bee1e5ab776eb9f12481283b366 459 PRINTS PR00175 Sodium/alanine symporter signature 93 115 3.9E-56 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 DB29_04156 76488bee1e5ab776eb9f12481283b366 459 PRINTS PR00175 Sodium/alanine symporter signature 212 231 3.9E-56 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 DB29_04156 76488bee1e5ab776eb9f12481283b366 459 PRINTS PR00175 Sodium/alanine symporter signature 349 371 3.9E-56 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 DB29_04156 76488bee1e5ab776eb9f12481283b366 459 PRINTS PR00175 Sodium/alanine symporter signature 303 321 3.9E-56 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 DB29_04156 76488bee1e5ab776eb9f12481283b366 459 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 93 108 - T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 DB29_01458 7a73870cabd9f185dbac84d8bd88ce8c 252 SUPERFAMILY SSF55781 67 244 5.76E-46 T 14-10-2018 DB29_01458 7a73870cabd9f185dbac84d8bd88ce8c 252 Pfam PF09339 IclR helix-turn-helix domain 7 54 4.8E-7 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 DB29_01458 7a73870cabd9f185dbac84d8bd88ce8c 252 SMART SM00346 2 92 1.1E-13 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 DB29_01458 7a73870cabd9f185dbac84d8bd88ce8c 252 Gene3D G3DSA:3.30.450.40 79 249 5.8E-49 T 14-10-2018 IPR029016 GAF-like domain superfamily DB29_01458 7a73870cabd9f185dbac84d8bd88ce8c 252 Gene3D G3DSA:1.10.10.10 1 76 2.7E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_01458 7a73870cabd9f185dbac84d8bd88ce8c 252 SUPERFAMILY SSF46785 3 76 4.22E-14 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_01458 7a73870cabd9f185dbac84d8bd88ce8c 252 Pfam PF01614 Bacterial transcriptional regulator 122 242 1.8E-29 T 14-10-2018 IPR014757 Transcription regulator IclR, C-terminal DB29_02095 b743ebe44698eb030c141d4130edad3c 206 SMART SM00345 7 65 1.9E-11 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DB29_02095 b743ebe44698eb030c141d4130edad3c 206 Pfam PF00392 Bacterial regulatory proteins, gntR family 5 65 9.3E-16 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DB29_02095 b743ebe44698eb030c141d4130edad3c 206 Gene3D G3DSA:1.20.120.530 69 204 6.0E-25 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DB29_02095 b743ebe44698eb030c141d4130edad3c 206 SMART SM00895 75 199 6.4E-15 T 14-10-2018 IPR011711 GntR, C-terminal DB29_02095 b743ebe44698eb030c141d4130edad3c 206 Gene3D G3DSA:1.10.10.10 1 66 9.5E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_02095 b743ebe44698eb030c141d4130edad3c 206 Pfam PF07729 FCD domain 75 197 3.7E-24 T 14-10-2018 IPR011711 GntR, C-terminal DB29_02095 b743ebe44698eb030c141d4130edad3c 206 SUPERFAMILY SSF46785 5 72 6.62E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_02095 b743ebe44698eb030c141d4130edad3c 206 SUPERFAMILY SSF48008 71 201 2.09E-24 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DB29_01985 96c906c45e38598ea003a41fd607d58e 437 Pfam PF06725 3D domain 376 436 1.4E-20 T 14-10-2018 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 DB29_01985 96c906c45e38598ea003a41fd607d58e 437 SMART SM01208 213 291 2.9E-24 T 14-10-2018 IPR011098 G5 domain DB29_01985 96c906c45e38598ea003a41fd607d58e 437 Gene3D G3DSA:2.20.230.10 211 298 4.8E-16 T 14-10-2018 DB29_01985 96c906c45e38598ea003a41fd607d58e 437 Pfam PF03990 Domain of unknown function (DUF348) 48 85 3.9E-12 T 14-10-2018 IPR007137 Resuscitation-promoting factor, domain of unknown function DUF348 DB29_01985 96c906c45e38598ea003a41fd607d58e 437 Pfam PF03990 Domain of unknown function (DUF348) 103 143 3.7E-10 T 14-10-2018 IPR007137 Resuscitation-promoting factor, domain of unknown function DUF348 DB29_01985 96c906c45e38598ea003a41fd607d58e 437 Pfam PF03990 Domain of unknown function (DUF348) 161 200 1.2E-10 T 14-10-2018 IPR007137 Resuscitation-promoting factor, domain of unknown function DUF348 DB29_01985 96c906c45e38598ea003a41fd607d58e 437 Pfam PF07501 G5 domain 218 290 1.2E-18 T 14-10-2018 IPR011098 G5 domain DB29_01985 96c906c45e38598ea003a41fd607d58e 437 SUPERFAMILY SSF50685 375 426 1.5E-7 T 14-10-2018 IPR036908 RlpA-like domain superfamily DB29_00562 47077e3e5f5b8bea85968d736ab35caf 157 Pfam PF00588 SpoU rRNA Methylase family 3 145 9.2E-31 T 14-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 DB29_00562 47077e3e5f5b8bea85968d736ab35caf 157 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 3 154 32.984 T 14-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 DB29_00562 47077e3e5f5b8bea85968d736ab35caf 157 PIRSF PIRSF029256 2 157 2.1E-63 T 14-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 DB29_00562 47077e3e5f5b8bea85968d736ab35caf 157 Gene3D G3DSA:3.40.1280.10 1 157 7.2E-63 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal DB29_00562 47077e3e5f5b8bea85968d736ab35caf 157 TIGRFAM TIGR00185 tRNA_yibK_trmL: tRNA (cytidine(34)-2'-O)-methyltransferase 3 156 2.8E-59 T 14-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 DB29_00562 47077e3e5f5b8bea85968d736ab35caf 157 SUPERFAMILY SSF75217 3 155 4.45E-42 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases DB29_00170 da58468a90494cde55d9412177e98176 554 Gene3D G3DSA:3.30.200.20 201 246 1.3E-6 T 14-10-2018 DB29_00170 da58468a90494cde55d9412177e98176 554 Gene3D G3DSA:1.10.510.10 247 311 1.3E-6 T 14-10-2018 DB29_00170 da58468a90494cde55d9412177e98176 554 Pfam PF03109 ABC1 family 112 230 6.0E-34 T 14-10-2018 IPR004147 UbiB domain DB29_00170 da58468a90494cde55d9412177e98176 554 SUPERFAMILY SSF56112 94 424 2.08E-30 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily DB29_03783 7cd186f23ddc0c0cd6858a3da41be681 374 Gene3D G3DSA:3.90.230.10 147 371 4.0E-85 T 14-10-2018 DB29_03783 7cd186f23ddc0c0cd6858a3da41be681 374 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 302 314 - T 14-10-2018 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site DB29_03783 7cd186f23ddc0c0cd6858a3da41be681 374 Pfam PF00557 Metallopeptidase family M24 154 356 4.0E-66 T 14-10-2018 IPR000994 Peptidase M24 DB29_03783 7cd186f23ddc0c0cd6858a3da41be681 374 SUPERFAMILY SSF53092 23 144 6.02E-26 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal DB29_03783 7cd186f23ddc0c0cd6858a3da41be681 374 Gene3D G3DSA:3.40.350.10 21 146 2.0E-35 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal DB29_03783 7cd186f23ddc0c0cd6858a3da41be681 374 Pfam PF01321 Creatinase/Prolidase N-terminal domain 23 146 1.1E-26 T 14-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 DB29_03783 7cd186f23ddc0c0cd6858a3da41be681 374 PRINTS PR00599 Methionine aminopeptidase-1 signature 226 242 5.6E-6 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 DB29_03783 7cd186f23ddc0c0cd6858a3da41be681 374 PRINTS PR00599 Methionine aminopeptidase-1 signature 324 336 5.6E-6 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 DB29_03783 7cd186f23ddc0c0cd6858a3da41be681 374 SUPERFAMILY SSF55920 104 366 6.67E-83 T 14-10-2018 IPR036005 Creatinase/aminopeptidase-like DB29_00140 56e70047112c2f61192c00df62b0a097 500 Pfam PF00270 DEAD/DEAH box helicase 18 176 1.1E-21 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 DB29_00140 56e70047112c2f61192c00df62b0a097 500 ProSitePatterns PS00690 DEAH-box subfamily ATP-dependent helicases signature. 129 138 - T 14-10-2018 IPR002464 DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site DB29_00140 56e70047112c2f61192c00df62b0a097 500 Pfam PF00271 Helicase conserved C-terminal domain 225 322 5.7E-19 T 14-10-2018 IPR001650 Helicase, C-terminal DB29_00140 56e70047112c2f61192c00df62b0a097 500 Pfam PF16124 RecQ zinc-binding 419 465 1.5E-7 T 14-10-2018 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain DB29_00140 56e70047112c2f61192c00df62b0a097 500 SUPERFAMILY SSF52540 54 343 1.65E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_00140 56e70047112c2f61192c00df62b0a097 500 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 6 347 4.3E-105 T 14-10-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 DB29_00140 56e70047112c2f61192c00df62b0a097 500 Gene3D G3DSA:3.40.50.300 1 196 7.5E-72 T 14-10-2018 DB29_00140 56e70047112c2f61192c00df62b0a097 500 SMART SM00490 240 323 1.3E-25 T 14-10-2018 IPR001650 Helicase, C-terminal DB29_00140 56e70047112c2f61192c00df62b0a097 500 SMART SM00487 11 202 8.3E-31 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DB29_02838 6e2e7e435bf171283dad4d460b1cf073 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 1.1E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_02838 6e2e7e435bf171283dad4d460b1cf073 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 1.1E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_02838 6e2e7e435bf171283dad4d460b1cf073 258 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 1.1E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_02838 6e2e7e435bf171283dad4d460b1cf073 258 SUPERFAMILY SSF51735 3 257 2.46E-81 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_02838 6e2e7e435bf171283dad4d460b1cf073 258 Gene3D G3DSA:3.40.50.720 1 258 2.8E-80 T 14-10-2018 DB29_02838 6e2e7e435bf171283dad4d460b1cf073 258 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 11 256 3.7E-64 T 14-10-2018 DB29_02838 6e2e7e435bf171283dad4d460b1cf073 258 TIGRFAM TIGR01963 PHB_DH: 3-hydroxybutyrate dehydrogenase 6 258 8.2E-106 T 14-10-2018 IPR011294 3-hydroxybutyrate dehydrogenase GO:0003858|GO:0055114 DB29_02838 6e2e7e435bf171283dad4d460b1cf073 258 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 DB29_02838 6e2e7e435bf171283dad4d460b1cf073 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 1.5E-40 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_02838 6e2e7e435bf171283dad4d460b1cf073 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 1.5E-40 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_02838 6e2e7e435bf171283dad4d460b1cf073 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 1.5E-40 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_02838 6e2e7e435bf171283dad4d460b1cf073 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 1.5E-40 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_02838 6e2e7e435bf171283dad4d460b1cf073 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 1.5E-40 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_02838 6e2e7e435bf171283dad4d460b1cf073 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 219 239 1.5E-40 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_00200 eaa80b853d4ee80f99b2c44c503effc6 254 Pfam PF04545 Sigma-70, region 4 202 248 7.3E-15 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 DB29_00200 eaa80b853d4ee80f99b2c44c503effc6 254 Gene3D G3DSA:1.10.10.10 106 159 6.9E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_00200 eaa80b853d4ee80f99b2c44c503effc6 254 Gene3D G3DSA:1.20.120.1810 2 105 1.7E-27 T 14-10-2018 DB29_00200 eaa80b853d4ee80f99b2c44c503effc6 254 Pfam PF04542 Sigma-70 region 2 38 104 5.6E-18 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 DB29_00200 eaa80b853d4ee80f99b2c44c503effc6 254 Gene3D G3DSA:1.10.10.10 179 253 9.2E-12 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_00200 eaa80b853d4ee80f99b2c44c503effc6 254 Pfam PF04539 Sigma-70 region 3 115 181 2.6E-12 T 14-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 DB29_00200 eaa80b853d4ee80f99b2c44c503effc6 254 PIRSF PIRSF000770 6 254 1.8E-35 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DB29_00200 eaa80b853d4ee80f99b2c44c503effc6 254 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 220 246 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DB29_00200 eaa80b853d4ee80f99b2c44c503effc6 254 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 61 74 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DB29_00200 eaa80b853d4ee80f99b2c44c503effc6 254 PRINTS PR00046 Major sigma-70 factor signature 61 74 3.7E-11 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DB29_00200 eaa80b853d4ee80f99b2c44c503effc6 254 PRINTS PR00046 Major sigma-70 factor signature 203 215 3.7E-11 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DB29_00200 eaa80b853d4ee80f99b2c44c503effc6 254 PRINTS PR00046 Major sigma-70 factor signature 85 93 3.7E-11 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DB29_00200 eaa80b853d4ee80f99b2c44c503effc6 254 PRINTS PR00046 Major sigma-70 factor signature 220 235 3.7E-11 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DB29_00200 eaa80b853d4ee80f99b2c44c503effc6 254 PRINTS PR00046 Major sigma-70 factor signature 235 246 3.7E-11 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DB29_00200 eaa80b853d4ee80f99b2c44c503effc6 254 SUPERFAMILY SSF88946 13 105 3.4E-33 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 DB29_00200 eaa80b853d4ee80f99b2c44c503effc6 254 SUPERFAMILY SSF88659 109 184 5.67E-17 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like DB29_00200 eaa80b853d4ee80f99b2c44c503effc6 254 TIGRFAM TIGR02885 spore_sigF: RNA polymerase sigma-F factor 22 250 1.0E-113 T 14-10-2018 IPR014236 RNA polymerase sigma-F type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DB29_00200 eaa80b853d4ee80f99b2c44c503effc6 254 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 32 249 2.2E-36 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 DB29_00200 eaa80b853d4ee80f99b2c44c503effc6 254 TIGRFAM TIGR02980 SigBFG: RNA polymerase sigma-70 factor, sigma-B/F/G subfamily 31 250 1.7E-88 T 14-10-2018 IPR014322 RNA polymerase sigma-B/F/G type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DB29_00200 eaa80b853d4ee80f99b2c44c503effc6 254 SUPERFAMILY SSF88659 171 251 8.04E-17 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like DB29_00303 45ee325b0c3084da52c7c95c23ae075c 379 SUPERFAMILY SSF55874 234 377 1.31E-33 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB29_00303 45ee325b0c3084da52c7c95c23ae075c 379 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 272 377 8.8E-19 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DB29_00303 45ee325b0c3084da52c7c95c23ae075c 379 SMART SM00388 167 229 1.5E-13 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DB29_00303 45ee325b0c3084da52c7c95c23ae075c 379 Pfam PF00512 His Kinase A (phospho-acceptor) domain 171 227 2.4E-14 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DB29_00303 45ee325b0c3084da52c7c95c23ae075c 379 Gene3D G3DSA:1.10.287.130 153 228 6.3E-15 T 14-10-2018 DB29_00303 45ee325b0c3084da52c7c95c23ae075c 379 Gene3D G3DSA:3.30.565.10 229 378 1.4E-36 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB29_00303 45ee325b0c3084da52c7c95c23ae075c 379 PRINTS PR00344 Bacterial sensor protein C-terminal signature 339 357 2.8E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB29_00303 45ee325b0c3084da52c7c95c23ae075c 379 PRINTS PR00344 Bacterial sensor protein C-terminal signature 310 324 2.8E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB29_00303 45ee325b0c3084da52c7c95c23ae075c 379 PRINTS PR00344 Bacterial sensor protein C-terminal signature 328 338 2.8E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB29_00303 45ee325b0c3084da52c7c95c23ae075c 379 PRINTS PR00344 Bacterial sensor protein C-terminal signature 363 376 2.8E-13 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB29_00303 45ee325b0c3084da52c7c95c23ae075c 379 SMART SM00387 270 379 1.4E-24 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DB29_00303 45ee325b0c3084da52c7c95c23ae075c 379 SUPERFAMILY SSF47384 161 228 7.26E-15 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DB29_01453 d1ae98800ff149525afde6df0483b799 216 Gene3D G3DSA:3.40.50.880 1 216 7.9E-39 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like DB29_01453 d1ae98800ff149525afde6df0483b799 216 SUPERFAMILY SSF52317 2 216 5.49E-46 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like DB29_01453 d1ae98800ff149525afde6df0483b799 216 Pfam PF06283 Trehalose utilisation 3 214 3.5E-46 T 14-10-2018 IPR029010 ThuA-like domain DB29_01022 b07780f936b46d7cd5577fd1526e016f 511 Gene3D G3DSA:1.10.10.60 448 511 1.7E-15 T 14-10-2018 DB29_01022 b07780f936b46d7cd5577fd1526e016f 511 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 230 243 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 DB29_01022 b07780f936b46d7cd5577fd1526e016f 511 SMART SM00382 226 370 8.7E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_01022 b07780f936b46d7cd5577fd1526e016f 511 Pfam PF02954 Bacterial regulatory protein, Fis family 473 509 1.5E-13 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DB29_01022 b07780f936b46d7cd5577fd1526e016f 511 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 475 492 1.4E-10 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DB29_01022 b07780f936b46d7cd5577fd1526e016f 511 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 492 511 1.4E-10 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DB29_01022 b07780f936b46d7cd5577fd1526e016f 511 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 70 184 2.1E-6 T 14-10-2018 IPR000014 PAS domain DB29_01022 b07780f936b46d7cd5577fd1526e016f 511 Gene3D G3DSA:1.10.8.60 378 442 2.1E-20 T 14-10-2018 DB29_01022 b07780f936b46d7cd5577fd1526e016f 511 Gene3D G3DSA:3.40.50.300 191 377 4.9E-68 T 14-10-2018 DB29_01022 b07780f936b46d7cd5577fd1526e016f 511 SUPERFAMILY SSF52540 206 442 7.94E-72 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_01022 b07780f936b46d7cd5577fd1526e016f 511 SUPERFAMILY SSF55785 64 175 1.03E-11 T 14-10-2018 IPR035965 PAS domain superfamily DB29_01022 b07780f936b46d7cd5577fd1526e016f 511 Gene3D G3DSA:3.30.450.20 61 175 1.4E-14 T 14-10-2018 DB29_01022 b07780f936b46d7cd5577fd1526e016f 511 Pfam PF00158 Sigma-54 interaction domain 206 373 6.1E-70 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 DB29_01022 b07780f936b46d7cd5577fd1526e016f 511 SUPERFAMILY SSF46689 420 511 4.18E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DB29_01022 b07780f936b46d7cd5577fd1526e016f 511 Pfam PF08448 PAS fold 79 178 1.9E-5 T 14-10-2018 IPR013656 PAS fold-4 DB29_01022 b07780f936b46d7cd5577fd1526e016f 511 SMART SM00091 72 137 8.1E-5 T 14-10-2018 IPR000014 PAS domain DB29_01763 3f94e241cd736999894fe78400936abf 257 SUPERFAMILY SSF46955 3 109 3.55E-25 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily DB29_01763 3f94e241cd736999894fe78400936abf 257 Pfam PF13411 MerR HTH family regulatory protein 3 70 1.1E-15 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DB29_01763 3f94e241cd736999894fe78400936abf 257 Gene3D G3DSA:1.10.1660.10 1 126 3.9E-31 T 14-10-2018 DB29_01763 3f94e241cd736999894fe78400936abf 257 SMART SM00422 3 72 3.5E-18 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DB29_01763 3f94e241cd736999894fe78400936abf 257 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 4 15 6.6E-6 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DB29_01763 3f94e241cd736999894fe78400936abf 257 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 15 28 6.6E-6 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DB29_01763 3f94e241cd736999894fe78400936abf 257 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 39 59 6.6E-6 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DB29_01612 c64da62ac1cecb0ff8314bd35d25f05c 308 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 96 300 4.9E-22 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DB29_01612 c64da62ac1cecb0ff8314bd35d25f05c 308 Gene3D G3DSA:1.10.3720.10 62 306 9.6E-74 T 14-10-2018 IPR035906 MetI-like superfamily DB29_01612 c64da62ac1cecb0ff8314bd35d25f05c 308 SUPERFAMILY SSF161098 66 292 1.13E-64 T 14-10-2018 IPR035906 MetI-like superfamily DB29_00761 5e146cbf83a05e1df2d0e348e64bc23a 539 SUPERFAMILY SSF55785 82 198 5.76E-13 T 14-10-2018 IPR035965 PAS domain superfamily DB29_00761 5e146cbf83a05e1df2d0e348e64bc23a 539 Pfam PF08448 PAS fold 78 191 5.6E-11 T 14-10-2018 IPR013656 PAS fold-4 DB29_00761 5e146cbf83a05e1df2d0e348e64bc23a 539 Pfam PF00512 His Kinase A (phospho-acceptor) domain 333 392 1.7E-13 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DB29_00761 5e146cbf83a05e1df2d0e348e64bc23a 539 SUPERFAMILY SSF55874 384 537 9.69E-37 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB29_00761 5e146cbf83a05e1df2d0e348e64bc23a 539 SMART SM00091 202 268 7.9E-14 T 14-10-2018 IPR000014 PAS domain DB29_00761 5e146cbf83a05e1df2d0e348e64bc23a 539 SMART SM00091 71 140 27.0 T 14-10-2018 IPR000014 PAS domain DB29_00761 5e146cbf83a05e1df2d0e348e64bc23a 539 Gene3D G3DSA:3.30.565.10 395 539 5.5E-38 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB29_00761 5e146cbf83a05e1df2d0e348e64bc23a 539 PRINTS PR00344 Bacterial sensor protein C-terminal signature 470 484 1.5E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB29_00761 5e146cbf83a05e1df2d0e348e64bc23a 539 PRINTS PR00344 Bacterial sensor protein C-terminal signature 488 498 1.5E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB29_00761 5e146cbf83a05e1df2d0e348e64bc23a 539 PRINTS PR00344 Bacterial sensor protein C-terminal signature 499 517 1.5E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB29_00761 5e146cbf83a05e1df2d0e348e64bc23a 539 PRINTS PR00344 Bacterial sensor protein C-terminal signature 523 536 1.5E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB29_00761 5e146cbf83a05e1df2d0e348e64bc23a 539 SUPERFAMILY SSF47384 324 392 1.96E-12 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DB29_00761 5e146cbf83a05e1df2d0e348e64bc23a 539 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 198 323 5.9E-23 T 14-10-2018 IPR000014 PAS domain DB29_00761 5e146cbf83a05e1df2d0e348e64bc23a 539 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 68 197 5.3E-12 T 14-10-2018 IPR000014 PAS domain DB29_00761 5e146cbf83a05e1df2d0e348e64bc23a 539 SMART SM00387 435 539 2.4E-27 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DB29_00761 5e146cbf83a05e1df2d0e348e64bc23a 539 Gene3D G3DSA:1.10.287.130 316 394 2.1E-17 T 14-10-2018 DB29_00761 5e146cbf83a05e1df2d0e348e64bc23a 539 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 436 537 2.2E-21 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DB29_00761 5e146cbf83a05e1df2d0e348e64bc23a 539 SUPERFAMILY SSF55785 187 314 1.61E-26 T 14-10-2018 IPR035965 PAS domain superfamily DB29_00761 5e146cbf83a05e1df2d0e348e64bc23a 539 Pfam PF00989 PAS fold 203 298 4.9E-11 T 14-10-2018 IPR013767 PAS fold GO:0006355 DB29_00761 5e146cbf83a05e1df2d0e348e64bc23a 539 Gene3D G3DSA:3.30.450.20 59 192 7.5E-19 T 14-10-2018 DB29_00761 5e146cbf83a05e1df2d0e348e64bc23a 539 Gene3D G3DSA:3.30.450.20 193 314 3.2E-24 T 14-10-2018 DB29_00761 5e146cbf83a05e1df2d0e348e64bc23a 539 SMART SM00388 331 394 1.2E-11 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DB29_01043 30173be2070ed38dd52da2dceafc7d0e 125 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 38 58 6.0E-8 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DB29_01043 30173be2070ed38dd52da2dceafc7d0e 125 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 3 14 6.0E-8 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DB29_01043 30173be2070ed38dd52da2dceafc7d0e 125 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 14 27 6.0E-8 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DB29_01043 30173be2070ed38dd52da2dceafc7d0e 125 SUPERFAMILY SSF46955 3 114 9.89E-31 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily DB29_01043 30173be2070ed38dd52da2dceafc7d0e 125 SMART SM00422 2 71 3.3E-25 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DB29_01043 30173be2070ed38dd52da2dceafc7d0e 125 Pfam PF13411 MerR HTH family regulatory protein 3 68 8.2E-19 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DB29_01043 30173be2070ed38dd52da2dceafc7d0e 125 Gene3D G3DSA:1.10.1660.10 2 124 7.6E-34 T 14-10-2018 DB29_02100 9e4de80adbbf4349b4782a9f6ca45116 218 SMART SM01007 8 181 1.8E-44 T 14-10-2018 IPR001303 Class II aldolase/adducin N-terminal DB29_02100 9e4de80adbbf4349b4782a9f6ca45116 218 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 9 180 2.7E-35 T 14-10-2018 IPR001303 Class II aldolase/adducin N-terminal DB29_02100 9e4de80adbbf4349b4782a9f6ca45116 218 Gene3D G3DSA:3.40.225.10 3 205 1.4E-49 T 14-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily DB29_02100 9e4de80adbbf4349b4782a9f6ca45116 218 SUPERFAMILY SSF53639 6 212 2.35E-52 T 14-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily DB29_04121 fb9e8d4389e918f85bef5e88d738a40e 71 ProDom PD048972 UPF0154 TRANSMEMBRANE MEMBRANE UNCHARACTERIZED FAMILY YNEF SUPERFAMILY MG335.1 EXPORTED MYCGA5700 10 54 1.0E-19 T 14-10-2018 IPR005359 Protein with unknown function UPF0154 DB29_04121 fb9e8d4389e918f85bef5e88d738a40e 71 Pfam PF03672 Uncharacterised protein family (UPF0154) 10 67 4.2E-29 T 14-10-2018 IPR005359 Protein with unknown function UPF0154 DB29_04121 fb9e8d4389e918f85bef5e88d738a40e 71 Hamap MF_00363 UPF0154 protein . 1 70 20.126 T 14-10-2018 IPR005359 Protein with unknown function UPF0154 DB29_00044 3d6fcaec5e7998e6c1d4901f66729f4f 307 SUPERFAMILY SSF54001 186 304 2.29E-37 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily DB29_00044 3d6fcaec5e7998e6c1d4901f66729f4f 307 SUPERFAMILY SSF47090 68 126 1.99E-16 T 14-10-2018 IPR036365 PGBD-like superfamily DB29_00044 3d6fcaec5e7998e6c1d4901f66729f4f 307 Pfam PF01471 Putative peptidoglycan binding domain 89 126 3.8E-13 T 14-10-2018 IPR002477 Peptidoglycan binding-like DB29_00044 3d6fcaec5e7998e6c1d4901f66729f4f 307 Gene3D G3DSA:3.90.1720.10 181 306 7.6E-42 T 14-10-2018 DB29_00044 3d6fcaec5e7998e6c1d4901f66729f4f 307 Gene3D G3DSA:1.10.101.10 63 133 1.1E-17 T 14-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 DB29_00044 3d6fcaec5e7998e6c1d4901f66729f4f 307 Pfam PF00877 NlpC/P60 family 201 303 1.5E-30 T 14-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain DB29_01864 2c467d8c16564e69ff5ead88e32421ac 233 Gene3D G3DSA:1.20.1260.10 106 233 5.9E-14 T 14-10-2018 IPR012347 Ferritin-like DB29_01864 2c467d8c16564e69ff5ead88e32421ac 233 SUPERFAMILY SSF47240 100 231 1.43E-24 T 14-10-2018 IPR009078 Ferritin-like superfamily DB29_01864 2c467d8c16564e69ff5ead88e32421ac 233 Pfam PF02915 Rubrerythrin 182 231 3.4E-5 T 14-10-2018 IPR003251 Rubrerythrin GO:0016491|GO:0046872|GO:0055114 DB29_00602 1f80b26df3b2cd83a84f8194b5d8307a 210 Pfam PF00196 Bacterial regulatory proteins, luxR family 149 204 2.9E-17 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DB29_00602 1f80b26df3b2cd83a84f8194b5d8307a 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 164 180 2.4E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DB29_00602 1f80b26df3b2cd83a84f8194b5d8307a 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 180 192 2.4E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DB29_00602 1f80b26df3b2cd83a84f8194b5d8307a 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 150 164 2.4E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DB29_00602 1f80b26df3b2cd83a84f8194b5d8307a 210 Pfam PF00072 Response regulator receiver domain 4 115 4.6E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DB29_00602 1f80b26df3b2cd83a84f8194b5d8307a 210 Gene3D G3DSA:3.40.50.12740 2 210 1.9E-66 T 14-10-2018 DB29_00602 1f80b26df3b2cd83a84f8194b5d8307a 210 SUPERFAMILY SSF52172 1 130 3.27E-33 T 14-10-2018 IPR011006 CheY-like superfamily DB29_00602 1f80b26df3b2cd83a84f8194b5d8307a 210 ProSitePatterns PS00622 LuxR-type HTH domain signature. 164 191 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DB29_00602 1f80b26df3b2cd83a84f8194b5d8307a 210 SMART SM00448 2 115 3.1E-30 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DB29_00602 1f80b26df3b2cd83a84f8194b5d8307a 210 SUPERFAMILY SSF46894 138 209 5.1E-22 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DB29_00602 1f80b26df3b2cd83a84f8194b5d8307a 210 SMART SM00421 147 204 1.4E-23 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DB29_03771 969f659b89fe58c9b7e43837e3c45d99 367 Gene3D G3DSA:2.40.30.110 283 365 2.0E-29 T 14-10-2018 DB29_03771 969f659b89fe58c9b7e43837e3c45d99 367 SUPERFAMILY SSF103025 5 284 1.02E-102 T 14-10-2018 DB29_03771 969f659b89fe58c9b7e43837e3c45d99 367 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 6 365 6.8E-137 T 14-10-2018 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 DB29_03771 969f659b89fe58c9b7e43837e3c45d99 367 Gene3D G3DSA:3.30.70.1400 54 139 6.1E-92 T 14-10-2018 DB29_03771 969f659b89fe58c9b7e43837e3c45d99 367 Gene3D G3DSA:3.30.1360.120 7 238 6.1E-92 T 14-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 DB29_03771 969f659b89fe58c9b7e43837e3c45d99 367 Hamap MF_00259 Aminomethyltransferase [gcvT]. 4 365 48.039 T 14-10-2018 IPR022903 Glycine cleavage system T protein, bacteria GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 DB29_03771 969f659b89fe58c9b7e43837e3c45d99 367 PIRSF PIRSF006487 1 367 2.1E-103 T 14-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 DB29_03771 969f659b89fe58c9b7e43837e3c45d99 367 Pfam PF01571 Aminomethyltransferase folate-binding domain 10 261 4.0E-95 T 14-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain DB29_03771 969f659b89fe58c9b7e43837e3c45d99 367 Gene3D G3DSA:4.10.1250.10 240 282 8.7E-18 T 14-10-2018 DB29_03771 969f659b89fe58c9b7e43837e3c45d99 367 SUPERFAMILY SSF101790 276 365 1.59E-26 T 14-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal DB29_03771 969f659b89fe58c9b7e43837e3c45d99 367 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 269 359 2.7E-27 T 14-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 DB29_03062 ec3c1fea791d2452f0f9cd7cd78a4a6c 647 SUPERFAMILY SSF53649 245 639 1.68E-73 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 DB29_03062 ec3c1fea791d2452f0f9cd7cd78a4a6c 647 Gene3D G3DSA:3.40.720.10 239 549 1.9E-75 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 DB29_03062 ec3c1fea791d2452f0f9cd7cd78a4a6c 647 Pfam PF00884 Sulfatase 247 539 3.6E-34 T 14-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 DB29_03062 ec3c1fea791d2452f0f9cd7cd78a4a6c 647 PIRSF PIRSF005091 1 622 3.0E-178 T 14-10-2018 IPR012160 Lipoteichoic acid synthase-like DB29_01626 341d47adb8f87e96b11ad30f91741139 491 SUPERFAMILY SSF53720 7 486 3.4E-154 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 DB29_01626 341d47adb8f87e96b11ad30f91741139 491 Gene3D G3DSA:3.40.309.10 256 454 2.6E-165 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 DB29_01626 341d47adb8f87e96b11ad30f91741139 491 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 281 292 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 DB29_01626 341d47adb8f87e96b11ad30f91741139 491 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 11 485 4.3E-181 T 14-10-2018 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00640+1.2.1.27|MetaCyc: PWY-5642|Reactome: R-HSA-70895 DB29_01626 341d47adb8f87e96b11ad30f91741139 491 Hamap MF_01670 Malonate-semialdehyde dehydrogenase [iolA]. 5 485 71.5 T 14-10-2018 IPR023510 Methylmalonate-semialdehyde dehydrogenase, Gram-positive bacteria GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00640+1.2.1.27|MetaCyc: PWY-5642 DB29_01626 341d47adb8f87e96b11ad30f91741139 491 Pfam PF00171 Aldehyde dehydrogenase family 19 481 2.9E-158 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 DB29_01626 341d47adb8f87e96b11ad30f91741139 491 Gene3D G3DSA:3.40.605.10 28 462 2.6E-165 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 DB29_03398 e1d2cd3aaca33dd2944677936d297198 387 Gene3D G3DSA:1.20.1090.10 185 387 1.1E-45 T 14-10-2018 DB29_03398 e1d2cd3aaca33dd2944677936d297198 387 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 264 284 - T 14-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 DB29_03398 e1d2cd3aaca33dd2944677936d297198 387 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 173 201 - T 14-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 DB29_03398 e1d2cd3aaca33dd2944677936d297198 387 Pfam PF00465 Iron-containing alcohol dehydrogenase 9 367 7.6E-100 T 14-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 DB29_03398 e1d2cd3aaca33dd2944677936d297198 387 Gene3D G3DSA:3.40.50.1970 1 184 1.1E-52 T 14-10-2018 DB29_03398 e1d2cd3aaca33dd2944677936d297198 387 SUPERFAMILY SSF56796 2 385 1.57E-112 T 14-10-2018 DB29_03785 6d3bb1b5c55cde60e5e14d22af74c60d 181 Pfam PF01202 Shikimate kinase 18 171 2.4E-39 T 14-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 DB29_03785 6d3bb1b5c55cde60e5e14d22af74c60d 181 SUPERFAMILY SSF52540 10 172 1.61E-22 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_03785 6d3bb1b5c55cde60e5e14d22af74c60d 181 Hamap MF_00109 Shikimate kinase [aroK]. 9 174 23.373 T 14-10-2018 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 DB29_03785 6d3bb1b5c55cde60e5e14d22af74c60d 181 Gene3D G3DSA:3.40.50.300 2 178 4.7E-43 T 14-10-2018 DB29_03785 6d3bb1b5c55cde60e5e14d22af74c60d 181 ProSitePatterns PS01128 Shikimate kinase signature. 65 90 - T 14-10-2018 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 DB29_03785 6d3bb1b5c55cde60e5e14d22af74c60d 181 PRINTS PR01100 Shikimate kinase family signature 12 27 1.7E-16 T 14-10-2018 DB29_03785 6d3bb1b5c55cde60e5e14d22af74c60d 181 PRINTS PR01100 Shikimate kinase family signature 103 120 1.7E-16 T 14-10-2018 DB29_03785 6d3bb1b5c55cde60e5e14d22af74c60d 181 PRINTS PR01100 Shikimate kinase family signature 36 49 1.7E-16 T 14-10-2018 DB29_03785 6d3bb1b5c55cde60e5e14d22af74c60d 181 PRINTS PR01100 Shikimate kinase family signature 82 91 1.7E-16 T 14-10-2018 DB29_03785 6d3bb1b5c55cde60e5e14d22af74c60d 181 PRINTS PR01100 Shikimate kinase family signature 64 72 1.7E-16 T 14-10-2018 DB29_00582 c409bbd95d230a95d73dc7022aa2d537 469 TIGRFAM TIGR01780 SSADH: succinate-semialdehyde dehydrogenase 19 463 4.8E-200 T 14-10-2018 IPR010102 Succinate semialdehyde dehydrogenase GO:0009013|GO:0009450|GO:0055114 Reactome: R-HSA-916853 DB29_00582 c409bbd95d230a95d73dc7022aa2d537 469 Pfam PF00171 Aldehyde dehydrogenase family 9 465 4.4E-175 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 DB29_00582 c409bbd95d230a95d73dc7022aa2d537 469 Gene3D G3DSA:3.40.309.10 250 437 2.1E-184 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 DB29_00582 c409bbd95d230a95d73dc7022aa2d537 469 SUPERFAMILY SSF53720 2 467 1.31E-171 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 DB29_00582 c409bbd95d230a95d73dc7022aa2d537 469 Gene3D G3DSA:3.40.605.10 9 460 2.1E-184 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 DB29_00582 c409bbd95d230a95d73dc7022aa2d537 469 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 271 282 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 DB29_03488 4e5eb942c724ab4084e02d7905124e24 217 Pfam PF00571 CBS domain 4 55 7.0E-12 T 14-10-2018 IPR000644 CBS domain DB29_03488 4e5eb942c724ab4084e02d7905124e24 217 Pfam PF00571 CBS domain 74 125 2.3E-14 T 14-10-2018 IPR000644 CBS domain DB29_03488 4e5eb942c724ab4084e02d7905124e24 217 Gene3D G3DSA:3.30.70.260 134 201 1.0E-6 T 14-10-2018 DB29_03488 4e5eb942c724ab4084e02d7905124e24 217 Gene3D G3DSA:3.10.580.10 1 133 1.3E-34 T 14-10-2018 DB29_03488 4e5eb942c724ab4084e02d7905124e24 217 SUPERFAMILY SSF55021 139 200 2.32E-9 T 14-10-2018 DB29_03488 4e5eb942c724ab4084e02d7905124e24 217 SUPERFAMILY SSF54631 1 129 3.54E-32 T 14-10-2018 DB29_03488 4e5eb942c724ab4084e02d7905124e24 217 SMART SM00116 10 58 6.7E-7 T 14-10-2018 IPR000644 CBS domain DB29_03488 4e5eb942c724ab4084e02d7905124e24 217 SMART SM00116 81 128 3.4E-14 T 14-10-2018 IPR000644 CBS domain DB29_03488 4e5eb942c724ab4084e02d7905124e24 217 Pfam PF01842 ACT domain 139 198 1.3E-10 T 14-10-2018 IPR002912 ACT domain DB29_03501 5196a763eb0d56f99a4e2d98e17975b8 66 Pfam PF00269 Small, acid-soluble spore proteins, alpha/beta type 7 61 7.4E-24 T 14-10-2018 IPR001448 Small acid-soluble spore protein, alpha/beta-type GO:0003690|GO:0006265 DB29_03501 5196a763eb0d56f99a4e2d98e17975b8 66 Gene3D G3DSA:1.10.8.910 7 66 2.0E-31 T 14-10-2018 IPR038300 SASP, alpha/beta-type superfamily DB29_03501 5196a763eb0d56f99a4e2d98e17975b8 66 ProSitePatterns PS00304 Small, acid-soluble spore proteins, alpha/beta type, signature 1. 22 31 - T 14-10-2018 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site GO:0003690|GO:0006265 DB29_03501 5196a763eb0d56f99a4e2d98e17975b8 66 ProSitePatterns PS00684 Small, acid-soluble spore proteins, alpha/beta type, signature 2. 40 54 - T 14-10-2018 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site GO:0003690|GO:0006265 DB29_03539 589c0164cbfa28d8e327f4ec680d903f 240 Pfam PF00072 Response regulator receiver domain 5 114 8.6E-30 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DB29_03539 589c0164cbfa28d8e327f4ec680d903f 240 SUPERFAMILY SSF52172 3 126 2.85E-43 T 14-10-2018 IPR011006 CheY-like superfamily DB29_03539 589c0164cbfa28d8e327f4ec680d903f 240 SMART SM00862 157 233 7.8E-30 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DB29_03539 589c0164cbfa28d8e327f4ec680d903f 240 SUPERFAMILY SSF46894 132 234 4.46E-33 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DB29_03539 589c0164cbfa28d8e327f4ec680d903f 240 Gene3D G3DSA:1.10.10.10 134 239 9.1E-38 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_03539 589c0164cbfa28d8e327f4ec680d903f 240 Pfam PF00486 Transcriptional regulatory protein, C terminal 160 233 8.1E-30 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DB29_03539 589c0164cbfa28d8e327f4ec680d903f 240 Gene3D G3DSA:3.40.50.2300 1 133 3.3E-39 T 14-10-2018 DB29_03539 589c0164cbfa28d8e327f4ec680d903f 240 SMART SM00448 3 114 3.0E-47 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DB29_02736 915913cacc04dcc80b8a90c69eaaeb2d 219 Pfam PF13346 ABC-2 family transporter protein 3 215 2.2E-39 T 14-10-2018 IPR025699 ABC-2 membrane transporter-like DB29_01893 b550fdd8a030eaa7be649b818b8e527a 86 SUPERFAMILY SSF50249 6 83 1.37E-31 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DB29_01893 b550fdd8a030eaa7be649b818b8e527a 86 PRINTS PR00973 Ribosomal protein S17 family signature 25 48 2.3E-10 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DB29_01893 b550fdd8a030eaa7be649b818b8e527a 86 PRINTS PR00973 Ribosomal protein S17 family signature 67 74 2.3E-10 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DB29_01893 b550fdd8a030eaa7be649b818b8e527a 86 PRINTS PR00973 Ribosomal protein S17 family signature 57 67 2.3E-10 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DB29_01893 b550fdd8a030eaa7be649b818b8e527a 86 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 6 77 8.0E-35 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DB29_01893 b550fdd8a030eaa7be649b818b8e527a 86 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 6 81 23.429 T 14-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DB29_01893 b550fdd8a030eaa7be649b818b8e527a 86 Pfam PF00366 Ribosomal protein S17 11 78 6.0E-32 T 14-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DB29_01893 b550fdd8a030eaa7be649b818b8e527a 86 Gene3D G3DSA:2.40.50.140 5 84 7.0E-35 T 14-10-2018 DB29_01893 b550fdd8a030eaa7be649b818b8e527a 86 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 6 77 1.1E-34 T 14-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DB29_01893 b550fdd8a030eaa7be649b818b8e527a 86 ProSitePatterns PS00056 Ribosomal protein S17 signature. 57 69 - T 14-10-2018 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB29_02281 a37cffc9a8d27c59fe0f438e546bab87 265 Pfam PF02096 60Kd inner membrane protein 59 249 1.3E-56 T 14-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 DB29_02281 a37cffc9a8d27c59fe0f438e546bab87 265 Hamap MF_01811 Membrane protein insertase YidC [yidC]. 3 254 30.336 T 14-10-2018 IPR023060 Membrane insertase YidC/YidC1/YidC2, Firmicutes GO:0016021|GO:0032977 DB29_02281 a37cffc9a8d27c59fe0f438e546bab87 265 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 59 249 3.0E-60 T 14-10-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB29_04037 9dadc5b67a36bad58c31f413d97a254d 236 Hamap MF_01220_B Uridylate kinase [pyrH]. 1 234 44.084 T 14-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 DB29_04037 9dadc5b67a36bad58c31f413d97a254d 236 SUPERFAMILY SSF53633 2 234 4.19E-74 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily DB29_04037 9dadc5b67a36bad58c31f413d97a254d 236 Gene3D G3DSA:3.40.1160.10 1 235 6.9E-81 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily DB29_04037 9dadc5b67a36bad58c31f413d97a254d 236 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 2 233 8.0E-101 T 14-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 DB29_04037 9dadc5b67a36bad58c31f413d97a254d 236 Pfam PF00696 Amino acid kinase family 3 213 6.9E-30 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 DB29_04037 9dadc5b67a36bad58c31f413d97a254d 236 PIRSF PIRSF005650 1 236 3.8E-96 T 14-10-2018 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 DB29_00986 3010be99a8efc0521a43f91db836878b 183 Gene3D G3DSA:1.20.120.1630 1 180 4.4E-20 T 14-10-2018 DB29_00986 3010be99a8efc0521a43f91db836878b 183 Pfam PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family 75 165 2.2E-30 T 14-10-2018 IPR007269 Isoprenylcysteine carboxyl methyltransferase GO:0004671|GO:0006481|GO:0016021 Reactome: R-HSA-163841 DB29_01696 bcd5d249c895e5252fb9b1587d302a12 535 SUPERFAMILY SSF53850 20 531 9.06E-86 T 14-10-2018 DB29_01696 bcd5d249c895e5252fb9b1587d302a12 535 Pfam PF13416 Bacterial extracellular solute-binding protein 71 381 2.2E-15 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein DB29_01696 bcd5d249c895e5252fb9b1587d302a12 535 Gene3D G3DSA:3.40.190.10 73 443 4.4E-127 T 14-10-2018 DB29_01696 bcd5d249c895e5252fb9b1587d302a12 535 Gene3D G3DSA:3.40.190.10 173 530 4.4E-127 T 14-10-2018 DB29_03498 527d0f8a5ee9e5e1e9e3acf095214be0 565 Pfam PF06160 Septation ring formation regulator, EzrA 7 561 2.5E-160 T 14-10-2018 IPR010379 Septation ring formation regulator EzrA GO:0000921|GO:0005940|GO:0016021 DB29_02614 366b1b5d7424eaf51a9213904665d707 318 TIGRFAM TIGR00330 glpX: fructose-1,6-bisphosphatase, class II 4 312 2.9E-106 T 14-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 DB29_02614 366b1b5d7424eaf51a9213904665d707 318 PIRSF PIRSF004532 1 317 8.0E-121 T 14-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 DB29_02614 366b1b5d7424eaf51a9213904665d707 318 Gene3D G3DSA:3.40.190.90 121 283 1.2E-117 T 14-10-2018 DB29_02614 366b1b5d7424eaf51a9213904665d707 318 SUPERFAMILY SSF56655 1 312 6.31E-96 T 14-10-2018 DB29_02614 366b1b5d7424eaf51a9213904665d707 318 Pfam PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded 4 310 1.6E-123 T 14-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 DB29_02614 366b1b5d7424eaf51a9213904665d707 318 Gene3D G3DSA:3.30.540.10 7 310 1.2E-117 T 14-10-2018 DB29_01681 b8d0ba65a88fcc8ba7f3632aaf4bd107 471 Gene3D G3DSA:1.20.1740.10 1 469 4.5E-55 T 14-10-2018 DB29_01681 b8d0ba65a88fcc8ba7f3632aaf4bd107 471 Pfam PF13520 Amino acid permease 10 426 1.8E-42 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 DB29_01681 b8d0ba65a88fcc8ba7f3632aaf4bd107 471 PIRSF PIRSF006060 1 467 2.0E-79 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 DB29_03384 1b153c47767bfd35a4f7ef2d4f6b2a61 496 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 2 495 34.535 T 14-10-2018 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 DB29_03384 1b153c47767bfd35a4f7ef2d4f6b2a61 496 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 180 486 2.2E-115 T 14-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 DB29_03384 1b153c47767bfd35a4f7ef2d4f6b2a61 496 Gene3D G3DSA:3.40.220.10 2 156 5.6E-32 T 14-10-2018 DB29_03384 1b153c47767bfd35a4f7ef2d4f6b2a61 496 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 18 145 8.1E-20 T 14-10-2018 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 DB29_03384 1b153c47767bfd35a4f7ef2d4f6b2a61 496 SUPERFAMILY SSF53187 177 492 1.44E-111 T 14-10-2018 DB29_03384 1b153c47767bfd35a4f7ef2d4f6b2a61 496 PRINTS PR00481 Cytosol aminopeptidase signature 257 274 2.2E-52 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 DB29_03384 1b153c47767bfd35a4f7ef2d4f6b2a61 496 PRINTS PR00481 Cytosol aminopeptidase signature 366 381 2.2E-52 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 DB29_03384 1b153c47767bfd35a4f7ef2d4f6b2a61 496 PRINTS PR00481 Cytosol aminopeptidase signature 279 300 2.2E-52 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 DB29_03384 1b153c47767bfd35a4f7ef2d4f6b2a61 496 PRINTS PR00481 Cytosol aminopeptidase signature 316 337 2.2E-52 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 DB29_03384 1b153c47767bfd35a4f7ef2d4f6b2a61 496 PRINTS PR00481 Cytosol aminopeptidase signature 338 358 2.2E-52 T 14-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 DB29_03384 1b153c47767bfd35a4f7ef2d4f6b2a61 496 Gene3D G3DSA:3.40.630.10 168 492 1.3E-124 T 14-10-2018 DB29_03384 1b153c47767bfd35a4f7ef2d4f6b2a61 496 SUPERFAMILY SSF52949 2 178 1.41E-32 T 14-10-2018 DB29_02776 a33320b7e90b6b28b3d82e8f3d86ad19 509 SUPERFAMILY SSF46689 151 198 8.06E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DB29_02776 a33320b7e90b6b28b3d82e8f3d86ad19 509 Pfam PF12833 Helix-turn-helix domain 171 249 1.7E-19 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DB29_02776 a33320b7e90b6b28b3d82e8f3d86ad19 509 Pfam PF01497 Periplasmic binding protein 256 485 3.4E-44 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain DB29_02776 a33320b7e90b6b28b3d82e8f3d86ad19 509 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 232 248 8.4E-7 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DB29_02776 a33320b7e90b6b28b3d82e8f3d86ad19 509 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 217 232 8.4E-7 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DB29_02776 a33320b7e90b6b28b3d82e8f3d86ad19 509 Gene3D G3DSA:1.10.10.60 149 198 3.4E-11 T 14-10-2018 DB29_02776 a33320b7e90b6b28b3d82e8f3d86ad19 509 Gene3D G3DSA:1.10.10.60 199 250 1.0E-16 T 14-10-2018 DB29_02776 a33320b7e90b6b28b3d82e8f3d86ad19 509 SUPERFAMILY SSF46689 202 251 1.21E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DB29_02776 a33320b7e90b6b28b3d82e8f3d86ad19 509 Gene3D G3DSA:3.40.50.1980 251 363 7.9E-7 T 14-10-2018 DB29_02776 a33320b7e90b6b28b3d82e8f3d86ad19 509 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 202 244 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 DB29_02776 a33320b7e90b6b28b3d82e8f3d86ad19 509 SUPERFAMILY SSF53807 250 506 1.02E-32 T 14-10-2018 DB29_02776 a33320b7e90b6b28b3d82e8f3d86ad19 509 Gene3D G3DSA:3.40.50.1980 366 506 1.1E-15 T 14-10-2018 DB29_02776 a33320b7e90b6b28b3d82e8f3d86ad19 509 SMART SM00342 165 248 7.5E-31 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DB29_03953 247a33842667768ab34f92fad76e3eed 70 Pfam PF01192 RNA polymerase Rpb6 9 61 3.2E-11 T 14-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 DB29_03953 247a33842667768ab34f92fad76e3eed 70 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 64 15.023 T 14-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DB29_03953 247a33842667768ab34f92fad76e3eed 70 SMART SM01409 8 63 1.3E-10 T 14-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 DB29_03953 247a33842667768ab34f92fad76e3eed 70 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 61 4.3E-17 T 14-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DB29_03953 247a33842667768ab34f92fad76e3eed 70 Gene3D G3DSA:3.90.940.10 1 70 9.6E-18 T 14-10-2018 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 DB29_03953 247a33842667768ab34f92fad76e3eed 70 SUPERFAMILY SSF63562 1 68 5.41E-20 T 14-10-2018 IPR036161 RPB6/omega subunit-like superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 DB29_04013 81849df65d1f6da188a183bb7a66f91d 186 SUPERFAMILY SSF158791 115 182 2.09E-7 T 14-10-2018 DB29_04013 81849df65d1f6da188a183bb7a66f91d 186 Gene3D G3DSA:1.25.60.10 103 185 4.7E-5 T 14-10-2018 IPR038076 MgtE, N-terminal domain superfamily DB29_04013 81849df65d1f6da188a183bb7a66f91d 186 Pfam PF03448 MgtE intracellular N domain 115 183 6.3E-6 T 14-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain DB29_02066 987aef47561d9f3ec33ae6f19ca148ad 629 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 8 621 1.3E-291 T 14-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 DB29_02066 987aef47561d9f3ec33ae6f19ca148ad 629 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 273 287 - T 14-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 DB29_02066 987aef47561d9f3ec33ae6f19ca148ad 629 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 9 31 2.0E-6 T 14-10-2018 DB29_02066 987aef47561d9f3ec33ae6f19ca148ad 629 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 152 161 2.0E-6 T 14-10-2018 DB29_02066 987aef47561d9f3ec33ae6f19ca148ad 629 Gene3D G3DSA:3.50.50.60 2 222 8.8E-82 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB29_02066 987aef47561d9f3ec33ae6f19ca148ad 629 Gene3D G3DSA:3.50.50.60 296 458 1.3E-57 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB29_02066 987aef47561d9f3ec33ae6f19ca148ad 629 Pfam PF01134 Glucose inhibited division protein A 9 399 1.7E-169 T 14-10-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 DB29_02066 987aef47561d9f3ec33ae6f19ca148ad 629 SUPERFAMILY SSF51905 8 260 3.11E-44 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB29_02066 987aef47561d9f3ec33ae6f19ca148ad 629 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 6 624 42.793 T 14-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 DB29_02066 987aef47561d9f3ec33ae6f19ca148ad 629 Pfam PF13932 GidA associated domain 401 616 4.4E-80 T 14-10-2018 IPR026904 GidA associated domain 3 Reactome: R-HSA-6787450 DB29_02066 987aef47561d9f3ec33ae6f19ca148ad 629 Gene3D G3DSA:1.10.150.570 569 621 2.7E-24 T 14-10-2018 DB29_02066 987aef47561d9f3ec33ae6f19ca148ad 629 SMART SM01228 546 617 3.4E-43 T 14-10-2018 DB29_02066 987aef47561d9f3ec33ae6f19ca148ad 629 Gene3D G3DSA:1.10.10.1800 459 550 2.3E-24 T 14-10-2018 DB29_02066 987aef47561d9f3ec33ae6f19ca148ad 629 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 368 391 - T 14-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 DB29_02785 335efbbffd31da20a68d438e82b73bf3 276 Pfam PF01909 Nucleotidyltransferase domain 15 106 1.0E-7 T 14-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 DB29_02785 335efbbffd31da20a68d438e82b73bf3 276 SUPERFAMILY SSF81301 4 84 1.59E-8 T 14-10-2018 DB29_02785 335efbbffd31da20a68d438e82b73bf3 276 Gene3D G3DSA:3.30.460.10 1 158 3.8E-7 T 14-10-2018 DB29_01674 14e730d459126b4f11d3d58d9ae48838 390 Gene3D G3DSA:3.40.50.720 1 140 3.4E-36 T 14-10-2018 DB29_01674 14e730d459126b4f11d3d58d9ae48838 390 Gene3D G3DSA:3.30.360.10 141 381 5.8E-62 T 14-10-2018 DB29_01674 14e730d459126b4f11d3d58d9ae48838 390 SUPERFAMILY SSF55347 146 341 2.62E-27 T 14-10-2018 DB29_01674 14e730d459126b4f11d3d58d9ae48838 390 SUPERFAMILY SSF51735 50 173 2.56E-28 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_01674 14e730d459126b4f11d3d58d9ae48838 390 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 50 136 6.9E-10 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 DB29_03358 90d2121b513ec4ca4e504fd18c91cbbe 162 Gene3D G3DSA:1.10.3760.10 2 162 6.0E-73 T 14-10-2018 DB29_03358 90d2121b513ec4ca4e504fd18c91cbbe 162 SUPERFAMILY SSF101307 8 160 2.22E-53 T 14-10-2018 IPR036681 PgpA-like superfamily GO:0006629|GO:0008962 DB29_03358 90d2121b513ec4ca4e504fd18c91cbbe 162 Pfam PF04608 Phosphatidylglycerophosphatase A 25 155 6.2E-18 T 14-10-2018 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 DB29_03358 90d2121b513ec4ca4e504fd18c91cbbe 162 PIRSF PIRSF019587 1 162 1.0E-77 T 14-10-2018 IPR026038 Putative phosphatidylglycerophosphatase DB29_0P0030 96ed115b671472df092ca0366e514ed9 462 SMART SM00942 223 288 1.0E-8 T 14-10-2018 IPR014820 Primase, C-terminal 1 DB29_0P0030 96ed115b671472df092ca0366e514ed9 462 Pfam PF08708 Primase C terminal 1 (PriCT-1) 226 285 6.9E-11 T 14-10-2018 IPR014820 Primase, C-terminal 1 DB29_02729 5b878eb297989f35f4bdfde54b9698fe 406 SUPERFAMILY SSF159501 19 401 9.94E-72 T 14-10-2018 DB29_02729 5b878eb297989f35f4bdfde54b9698fe 406 Gene3D G3DSA:1.20.1440.30 140 268 3.8E-34 T 14-10-2018 DB29_02729 5b878eb297989f35f4bdfde54b9698fe 406 Pfam PF05139 Erythromycin esterase 73 396 5.5E-30 T 14-10-2018 IPR007815 Erythromycin esterase GO:0046677 DB29_02729 5b878eb297989f35f4bdfde54b9698fe 406 Gene3D G3DSA:3.30.1870.10 75 139 3.8E-34 T 14-10-2018 DB29_02729 5b878eb297989f35f4bdfde54b9698fe 406 Gene3D G3DSA:3.40.1660.10 35 396 3.8E-34 T 14-10-2018 DB29_01429 e70a1efa4c6fd02fa41ffe8f066b4489 327 SUPERFAMILY SSF53850 41 319 3.98E-48 T 14-10-2018 DB29_01429 e70a1efa4c6fd02fa41ffe8f066b4489 327 Gene3D G3DSA:3.40.190.10 42 316 1.3E-103 T 14-10-2018 DB29_01429 e70a1efa4c6fd02fa41ffe8f066b4489 327 TIGRFAM TIGR01728 SsuA_fam: ABC transporter, substrate-binding protein, aliphatic sulfonates family 42 321 4.1E-70 T 14-10-2018 IPR010067 Aliphatic sulfonates-binding protein GO:0016020|GO:0042626 DB29_01429 e70a1efa4c6fd02fa41ffe8f066b4489 327 Pfam PF13379 NMT1-like family 40 266 6.7E-15 T 14-10-2018 DB29_01429 e70a1efa4c6fd02fa41ffe8f066b4489 327 Gene3D G3DSA:3.40.190.10 121 221 1.3E-103 T 14-10-2018 DB29_01429 e70a1efa4c6fd02fa41ffe8f066b4489 327 Gene3D G3DSA:1.10.8.450 253 285 1.3E-103 T 14-10-2018 DB29_01429 e70a1efa4c6fd02fa41ffe8f066b4489 327 SMART SM00062 41 258 2.4E-14 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DB29_00302 68b08e1794918e0e1fe2df82a60c5279 238 SUPERFAMILY SSF53955 88 209 3.66E-26 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily DB29_00302 68b08e1794918e0e1fe2df82a60c5279 238 Pfam PF01464 Transglycosylase SLT domain 99 214 2.8E-18 T 14-10-2018 IPR008258 Transglycosylase SLT domain 1 DB29_00302 68b08e1794918e0e1fe2df82a60c5279 238 Gene3D G3DSA:1.10.530.10 87 234 1.7E-24 T 14-10-2018 DB29_01471 8ef3f145ef3645e4d74a1c47cc7dd35b 540 SUPERFAMILY SSF53850 24 537 6.86E-89 T 14-10-2018 DB29_01471 8ef3f145ef3645e4d74a1c47cc7dd35b 540 Gene3D G3DSA:3.40.190.10 79 448 1.1E-100 T 14-10-2018 DB29_01471 8ef3f145ef3645e4d74a1c47cc7dd35b 540 Pfam PF13416 Bacterial extracellular solute-binding protein 78 393 1.1E-23 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein DB29_01471 8ef3f145ef3645e4d74a1c47cc7dd35b 540 Gene3D G3DSA:3.40.190.10 178 535 1.1E-100 T 14-10-2018 DB29_01103 8e6b14984dbb8ab9a065cfeed836499a 142 Pfam PF02391 MoaE protein 4 115 3.4E-39 T 14-10-2018 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 DB29_01103 8e6b14984dbb8ab9a065cfeed836499a 142 SUPERFAMILY SSF54690 2 134 2.88E-49 T 14-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 DB29_01103 8e6b14984dbb8ab9a065cfeed836499a 142 Gene3D G3DSA:3.90.1170.40 1 141 1.8E-56 T 14-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 DB29_03952 5e764faf9e152097a787eca465d72d67 206 Pfam PF00625 Guanylate kinase 9 186 3.8E-46 T 14-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit DB29_03952 5e764faf9e152097a787eca465d72d67 206 Gene3D G3DSA:3.30.63.10 38 97 1.2E-65 T 14-10-2018 DB29_03952 5e764faf9e152097a787eca465d72d67 206 SUPERFAMILY SSF52540 5 191 1.79E-67 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_03952 5e764faf9e152097a787eca465d72d67 206 SMART SM00072 6 188 5.1E-70 T 14-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit DB29_03952 5e764faf9e152097a787eca465d72d67 206 Hamap MF_00328 Guanylate kinase [gmk]. 5 188 36.091 T 14-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 DB29_03952 5e764faf9e152097a787eca465d72d67 206 Gene3D G3DSA:3.40.50.300 11 184 1.2E-65 T 14-10-2018 DB29_03952 5e764faf9e152097a787eca465d72d67 206 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 7 185 8.9E-71 T 14-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 DB29_03952 5e764faf9e152097a787eca465d72d67 206 ProSitePatterns PS00856 Guanylate kinase-like signature. 41 58 - T 14-10-2018 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 DB29_04301 4e3952fcb6851e5d726b06ad2232c8af 163 Gene3D G3DSA:3.10.450.40 25 93 4.7E-12 T 14-10-2018 DB29_04301 4e3952fcb6851e5d726b06ad2232c8af 163 Gene3D G3DSA:3.10.450.40 98 159 2.0E-8 T 14-10-2018 DB29_04301 4e3952fcb6851e5d726b06ad2232c8af 163 SUPERFAMILY SSF54403 98 159 2.04E-12 T 14-10-2018 DB29_04301 4e3952fcb6851e5d726b06ad2232c8af 163 SUPERFAMILY SSF54403 33 87 2.89E-13 T 14-10-2018 DB29_03903 df08a247c707aacd175725bdb4195327 165 Pfam PF13508 Acetyltransferase (GNAT) domain 67 131 3.8E-7 T 14-10-2018 IPR000182 GNAT domain DB29_03903 df08a247c707aacd175725bdb4195327 165 Hamap MF_00824 Uncharacterized N-acetyltransferase . 2 149 43.201 T 14-10-2018 IPR017274 Putative N-acetyltransferase YlbP DB29_03903 df08a247c707aacd175725bdb4195327 165 PIRSF PIRSF037732 1 162 6.4E-85 T 14-10-2018 IPR017274 Putative N-acetyltransferase YlbP DB29_03903 df08a247c707aacd175725bdb4195327 165 Gene3D G3DSA:3.40.630.30 1 162 3.0E-52 T 14-10-2018 DB29_03903 df08a247c707aacd175725bdb4195327 165 SUPERFAMILY SSF55729 24 134 6.62E-13 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase DB29_00042 0d97709f418850da16dc091c25ee27ba 195 Gene3D G3DSA:1.10.357.10 1 189 1.7E-51 T 14-10-2018 DB29_00042 0d97709f418850da16dc091c25ee27ba 195 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 28 51 1.1E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DB29_00042 0d97709f418850da16dc091c25ee27ba 195 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 7 20 1.1E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DB29_00042 0d97709f418850da16dc091c25ee27ba 195 SUPERFAMILY SSF46689 3 67 1.15E-15 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DB29_00042 0d97709f418850da16dc091c25ee27ba 195 Pfam PF00440 Bacterial regulatory proteins, tetR family 7 52 4.5E-16 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DB29_00042 0d97709f418850da16dc091c25ee27ba 195 SUPERFAMILY SSF48498 74 167 7.91E-9 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily DB29_01654 4af9f7993d08a713ac6be8b8a47e90cb 293 Gene3D G3DSA:1.10.3720.10 49 289 4.2E-73 T 14-10-2018 IPR035906 MetI-like superfamily DB29_01654 4af9f7993d08a713ac6be8b8a47e90cb 293 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 85 279 7.3E-18 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DB29_01654 4af9f7993d08a713ac6be8b8a47e90cb 293 SUPERFAMILY SSF161098 53 281 2.75E-62 T 14-10-2018 IPR035906 MetI-like superfamily DB29_01999 a6c56c263db0f72544d306de487ae658 288 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 14 212 2.9E-30 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 DB29_01999 a6c56c263db0f72544d306de487ae658 288 Gene3D G3DSA:3.40.1010.10 1 120 1.9E-45 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 DB29_01999 a6c56c263db0f72544d306de487ae658 288 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 13 231 36.461 T 14-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 DB29_01999 a6c56c263db0f72544d306de487ae658 288 PIRSF PIRSF005917 1 288 2.2E-101 T 14-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 DB29_01999 a6c56c263db0f72544d306de487ae658 288 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 14 287 1.8E-80 T 14-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 DB29_01999 a6c56c263db0f72544d306de487ae658 288 SUPERFAMILY SSF53790 12 229 6.28E-81 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 DB29_01999 a6c56c263db0f72544d306de487ae658 288 Gene3D G3DSA:3.30.950.10 121 236 1.5E-39 T 14-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 DB29_01999 a6c56c263db0f72544d306de487ae658 288 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 91 102 - T 14-10-2018 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 DB29_00520 4f119beb418fccd56ea7246de823edca 182 Gene3D G3DSA:1.20.1440.20 14 182 9.3E-62 T 14-10-2018 IPR023353 LemA-like domain superfamily DB29_00520 4f119beb418fccd56ea7246de823edca 182 Pfam PF04011 LemA family 4 182 8.3E-71 T 14-10-2018 IPR007156 LemA DB29_00520 4f119beb418fccd56ea7246de823edca 182 SUPERFAMILY SSF140478 23 171 3.66E-55 T 14-10-2018 IPR023353 LemA-like domain superfamily DB29_04060 6042a696bbb85a5a1bcecc874680b57b 294 SUPERFAMILY SSF51735 132 248 1.7E-19 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_04060 6042a696bbb85a5a1bcecc874680b57b 294 Gene3D G3DSA:3.40.50.720 126 272 2.5E-98 T 14-10-2018 DB29_04060 6042a696bbb85a5a1bcecc874680b57b 294 Gene3D G3DSA:3.40.50.720 8 287 2.5E-98 T 14-10-2018 DB29_04060 6042a696bbb85a5a1bcecc874680b57b 294 TIGRFAM TIGR02853 spore_dpaA: dipicolinic acid synthetase, A subunit 4 290 8.8E-141 T 14-10-2018 IPR014215 Dipicolinic acid synthetase subunit A DB29_04060 6042a696bbb85a5a1bcecc874680b57b 294 Pfam PF16924 Dipicolinate synthase subunit A N-terminal domain 6 123 8.3E-27 T 14-10-2018 IPR031629 Dipicolinate synthase subunit A, N-terminal DB29_04060 6042a696bbb85a5a1bcecc874680b57b 294 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 151 291 6.8E-9 T 14-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain DB29_00172 d4536a0240704c0f1d279475720c624d 288 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 174 276 1.1E-36 T 14-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DB29_00172 d4536a0240704c0f1d279475720c624d 288 SUPERFAMILY SSF46609 86 172 2.23E-32 T 14-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DB29_00172 d4536a0240704c0f1d279475720c624d 288 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 87 167 4.1E-27 T 14-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DB29_00172 d4536a0240704c0f1d279475720c624d 288 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 243 250 - T 14-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DB29_00172 d4536a0240704c0f1d279475720c624d 288 PRINTS PR01703 Manganese superoxide dismutase signature 241 253 1.5E-21 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DB29_00172 d4536a0240704c0f1d279475720c624d 288 PRINTS PR01703 Manganese superoxide dismutase signature 150 163 1.5E-21 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DB29_00172 d4536a0240704c0f1d279475720c624d 288 PRINTS PR01703 Manganese superoxide dismutase signature 203 211 1.5E-21 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DB29_00172 d4536a0240704c0f1d279475720c624d 288 PRINTS PR01703 Manganese superoxide dismutase signature 90 101 1.5E-21 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DB29_00172 d4536a0240704c0f1d279475720c624d 288 PRINTS PR01703 Manganese superoxide dismutase signature 111 124 1.5E-21 T 14-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DB29_00172 d4536a0240704c0f1d279475720c624d 288 SUPERFAMILY SSF54719 166 280 2.23E-42 T 14-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DB29_00172 d4536a0240704c0f1d279475720c624d 288 Gene3D G3DSA:2.40.500.20 167 286 5.5E-46 T 14-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DB29_00172 d4536a0240704c0f1d279475720c624d 288 Gene3D G3DSA:1.10.287.990 104 166 1.4E-22 T 14-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 DB29_03623 99dc5eea4ae2ecc5444165f7a1c6c4e2 311 SUPERFAMILY SSF53850 2 217 7.06E-81 T 14-10-2018 DB29_03623 99dc5eea4ae2ecc5444165f7a1c6c4e2 311 PIRSF PIRSF001438 1 309 4.3E-122 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 DB29_03623 99dc5eea4ae2ecc5444165f7a1c6c4e2 311 Gene3D G3DSA:3.40.190.10 101 201 1.0E-84 T 14-10-2018 DB29_03623 99dc5eea4ae2ecc5444165f7a1c6c4e2 311 PRINTS PR00151 Porphobilinogen deaminase signature 43 63 4.6E-48 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 DB29_03623 99dc5eea4ae2ecc5444165f7a1c6c4e2 311 PRINTS PR00151 Porphobilinogen deaminase signature 74 93 4.6E-48 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 DB29_03623 99dc5eea4ae2ecc5444165f7a1c6c4e2 311 PRINTS PR00151 Porphobilinogen deaminase signature 229 246 4.6E-48 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 DB29_03623 99dc5eea4ae2ecc5444165f7a1c6c4e2 311 PRINTS PR00151 Porphobilinogen deaminase signature 141 158 4.6E-48 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 DB29_03623 99dc5eea4ae2ecc5444165f7a1c6c4e2 311 PRINTS PR00151 Porphobilinogen deaminase signature 122 139 4.6E-48 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 DB29_03623 99dc5eea4ae2ecc5444165f7a1c6c4e2 311 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 226 292 2.8E-18 T 14-10-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 DB29_03623 99dc5eea4ae2ecc5444165f7a1c6c4e2 311 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 4 294 1.8E-109 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 DB29_03623 99dc5eea4ae2ecc5444165f7a1c6c4e2 311 SUPERFAMILY SSF54782 219 307 2.62E-21 T 14-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 DB29_03623 99dc5eea4ae2ecc5444165f7a1c6c4e2 311 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 3 295 39.426 T 14-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 DB29_03623 99dc5eea4ae2ecc5444165f7a1c6c4e2 311 Gene3D G3DSA:3.30.160.40 220 304 1.2E-26 T 14-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 DB29_03623 99dc5eea4ae2ecc5444165f7a1c6c4e2 311 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 4 211 7.0E-80 T 14-10-2018 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 DB29_03623 99dc5eea4ae2ecc5444165f7a1c6c4e2 311 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 230 246 - T 14-10-2018 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 DB29_03623 99dc5eea4ae2ecc5444165f7a1c6c4e2 311 Gene3D G3DSA:3.40.190.10 4 208 1.0E-84 T 14-10-2018 DB29_03101 f0cc9ec060aab5a2e01b4e126be9b0c8 481 SUPERFAMILY SSF53187 7 449 1.48E-51 T 14-10-2018 DB29_03101 f0cc9ec060aab5a2e01b4e126be9b0c8 481 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 21 431 5.3E-82 T 14-10-2018 IPR017439 Amidohydrolase GO:0016787 DB29_03101 f0cc9ec060aab5a2e01b4e126be9b0c8 481 SUPERFAMILY SSF55031 190 293 1.26E-17 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain DB29_03101 f0cc9ec060aab5a2e01b4e126be9b0c8 481 Gene3D G3DSA:3.40.630.10 21 325 4.3E-79 T 14-10-2018 DB29_03101 f0cc9ec060aab5a2e01b4e126be9b0c8 481 Gene3D G3DSA:3.30.70.360 184 301 4.3E-79 T 14-10-2018 DB29_03101 f0cc9ec060aab5a2e01b4e126be9b0c8 481 PIRSF PIRSF037227 1 481 1.2E-230 T 14-10-2018 IPR017145 Aminobenzoyl-glutamate utilization protein B DB29_03101 f0cc9ec060aab5a2e01b4e126be9b0c8 481 Gene3D G3DSA:3.40.630.10 331 465 7.2E-19 T 14-10-2018 DB29_01395 90c51807d6460f3ff0d24a4fef2b96f8 194 Gene3D G3DSA:3.40.50.1950 1 191 2.6E-82 T 14-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 DB29_01395 90c51807d6460f3ff0d24a4fef2b96f8 194 Pfam PF02441 Flavoprotein 1 163 3.6E-28 T 14-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 DB29_01395 90c51807d6460f3ff0d24a4fef2b96f8 194 Hamap MF_01984 Flavin prenyltransferase UbiX [ubiX]. 1 184 37.449 T 14-10-2018 IPR004507 Flavin prenyltransferase UbiX-like DB29_01395 90c51807d6460f3ff0d24a4fef2b96f8 194 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 2 182 2.8E-82 T 14-10-2018 IPR004507 Flavin prenyltransferase UbiX-like DB29_01395 90c51807d6460f3ff0d24a4fef2b96f8 194 Hamap MF_01986 Probable UbiX-like flavin prenyltransferase. 1 188 50.442 T 14-10-2018 IPR032901 Probable UbiX-like flavin prenyltransferase DB29_01395 90c51807d6460f3ff0d24a4fef2b96f8 194 SUPERFAMILY SSF52507 1 184 6.15E-65 T 14-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 DB29_02640 e760a96848b4f1f56eab890225f2e3f6 454 Gene3D G3DSA:3.50.50.60 2 183 1.1E-19 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB29_02640 e760a96848b4f1f56eab890225f2e3f6 454 SUPERFAMILY SSF51905 10 427 3.59E-27 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB29_02640 e760a96848b4f1f56eab890225f2e3f6 454 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 18 40 1.4E-6 T 14-10-2018 DB29_02640 e760a96848b4f1f56eab890225f2e3f6 454 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 158 167 1.4E-6 T 14-10-2018 DB29_02640 e760a96848b4f1f56eab890225f2e3f6 454 Pfam PF12831 FAD dependent oxidoreductase 18 446 2.0E-118 T 14-10-2018 IPR039649 Digeranylgeranylglycerophospholipid reductase, N-terminal DB29_01010 f9d5d48f390afdea75c11622b337b8d4 239 Hamap MF_02105 Lactate utilization protein A [lutA]. 1 238 62.492 T 14-10-2018 IPR022822 Lactate utilization protein A GO:0006089 DB29_01010 f9d5d48f390afdea75c11622b337b8d4 239 Pfam PF02754 Cysteine-rich domain 3 83 1.0E-15 T 14-10-2018 IPR004017 Cysteine-rich domain DB29_01010 f9d5d48f390afdea75c11622b337b8d4 239 Pfam PF02754 Cysteine-rich domain 132 215 1.2E-15 T 14-10-2018 IPR004017 Cysteine-rich domain DB29_00752 46b72c8f21a533e440d9671a40f6094d 336 Pfam PF02653 Branched-chain amino acid transport system / permease component 7 292 1.2E-32 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 DB29_00720 5672b1f6f45e2aadf7a40dca09743016 490 Gene3D G3DSA:3.30.1360.60 14 93 1.4E-27 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 DB29_00720 5672b1f6f45e2aadf7a40dca09743016 490 SUPERFAMILY SSF55604 21 96 2.22E-20 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 DB29_00720 5672b1f6f45e2aadf7a40dca09743016 490 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 34 51 - T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 DB29_00720 5672b1f6f45e2aadf7a40dca09743016 490 TIGRFAM TIGR01992 PTS-IIBC-Tre: PTS system, trehalose-specific IIBC component 20 477 2.0E-192 T 14-10-2018 IPR011296 Phosphotransferase system, trehalose-specific IIBC component GO:0015574|GO:0015771|GO:0016021 KEGG: 00500+2.7.1.201 DB29_00720 5672b1f6f45e2aadf7a40dca09743016 490 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 43 126 5.3E-19 T 14-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 DB29_00720 5672b1f6f45e2aadf7a40dca09743016 490 Pfam PF00367 phosphotransferase system, EIIB 24 56 3.3E-15 T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 DB29_00720 5672b1f6f45e2aadf7a40dca09743016 490 Pfam PF02378 Phosphotransferase system, EIIC 126 420 3.7E-44 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 DB29_00088 0c3dfeab785020d4ebcec27fbe468f8f 341 Pfam PF02885 Glycosyl transferase family, helical bundle domain 4 64 6.7E-17 T 14-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 DB29_00088 0c3dfeab785020d4ebcec27fbe468f8f 341 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 6 333 2.9E-125 T 14-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 DB29_00088 0c3dfeab785020d4ebcec27fbe468f8f 341 Pfam PF00591 Glycosyl transferase family, a/b domain 75 321 1.6E-93 T 14-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 DB29_00088 0c3dfeab785020d4ebcec27fbe468f8f 341 SUPERFAMILY SSF47648 1 68 5.36E-18 T 14-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 DB29_00088 0c3dfeab785020d4ebcec27fbe468f8f 341 Gene3D G3DSA:1.20.970.10 6 183 4.3E-126 T 14-10-2018 DB29_00088 0c3dfeab785020d4ebcec27fbe468f8f 341 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 4 334 38.248 T 14-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 DB29_00088 0c3dfeab785020d4ebcec27fbe468f8f 341 SUPERFAMILY SSF52418 74 336 3.4E-91 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 DB29_00088 0c3dfeab785020d4ebcec27fbe468f8f 341 Gene3D G3DSA:3.40.1030.10 73 317 4.3E-126 T 14-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 DB29_01021 bf22b8dcf22f27629153b44b486b6504 516 SUPERFAMILY SSF53720 4 512 2.09E-157 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 DB29_01021 bf22b8dcf22f27629153b44b486b6504 516 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 285 292 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 DB29_01021 bf22b8dcf22f27629153b44b486b6504 516 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 313 324 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 DB29_01021 bf22b8dcf22f27629153b44b486b6504 516 Gene3D G3DSA:3.40.309.10 290 481 8.7E-193 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 DB29_01021 bf22b8dcf22f27629153b44b486b6504 516 TIGRFAM TIGR01237 D1pyr5carbox2: putative delta-1-pyrroline-5-carboxylate dehydrogenase 5 516 1.7E-256 T 14-10-2018 IPR005932 Putative 1-pyrroline-5-carboxylate dehydrogenase, Bacillales KEGG: 00250+1.2.1.88|KEGG: 00330+1.2.1.88|MetaCyc: PWY-6853 DB29_01021 bf22b8dcf22f27629153b44b486b6504 516 Pfam PF00171 Aldehyde dehydrogenase family 49 512 4.4E-159 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 DB29_01021 bf22b8dcf22f27629153b44b486b6504 516 Gene3D G3DSA:3.40.605.10 10 512 8.7E-193 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 DB29_02509 888e61240a7f9f89f78325ef5ff84a28 300 Pfam PF00669 Bacterial flagellin N-terminal helical region 3 146 2.0E-40 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 DB29_02509 888e61240a7f9f89f78325ef5ff84a28 300 Gene3D G3DSA:1.20.1330.10 52 251 6.5E-61 T 14-10-2018 DB29_02509 888e61240a7f9f89f78325ef5ff84a28 300 PRINTS PR00207 Flagellin signature 74 93 7.4E-18 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 DB29_02509 888e61240a7f9f89f78325ef5ff84a28 300 PRINTS PR00207 Flagellin signature 35 52 7.4E-18 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 DB29_02509 888e61240a7f9f89f78325ef5ff84a28 300 PRINTS PR00207 Flagellin signature 110 133 7.4E-18 T 14-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 DB29_02509 888e61240a7f9f89f78325ef5ff84a28 300 Pfam PF00700 Bacterial flagellin C-terminal helical region 215 299 9.5E-30 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 DB29_02509 888e61240a7f9f89f78325ef5ff84a28 300 Gene3D G3DSA:1.10.8.410 252 299 2.0E-27 T 14-10-2018 DB29_02509 888e61240a7f9f89f78325ef5ff84a28 300 SUPERFAMILY SSF64518 1 299 3.66E-91 T 14-10-2018 DB29_00234 9aa315641f9f531d6a2850ac2732127d 452 Gene3D G3DSA:3.40.1160.10 3 287 1.0E-73 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily DB29_00234 9aa315641f9f531d6a2850ac2732127d 452 Gene3D G3DSA:1.20.120.1320 39 135 1.0E-73 T 14-10-2018 DB29_00234 9aa315641f9f531d6a2850ac2732127d 452 SUPERFAMILY SSF53633 2 290 8.9E-69 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily DB29_00234 9aa315641f9f531d6a2850ac2732127d 452 Pfam PF01842 ACT domain 393 442 1.6E-9 T 14-10-2018 IPR002912 ACT domain DB29_00234 9aa315641f9f531d6a2850ac2732127d 452 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 3 448 1.7E-86 T 14-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 DB29_00234 9aa315641f9f531d6a2850ac2732127d 452 SUPERFAMILY SSF55021 371 448 1.37E-23 T 14-10-2018 DB29_00234 9aa315641f9f531d6a2850ac2732127d 452 ProSitePatterns PS00324 Aspartokinase signature. 3 11 - T 14-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 DB29_00234 9aa315641f9f531d6a2850ac2732127d 452 Gene3D G3DSA:3.30.2130.10 290 452 2.3E-56 T 14-10-2018 DB29_00234 9aa315641f9f531d6a2850ac2732127d 452 PIRSF PIRSF000726 1 452 4.7E-82 T 14-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 DB29_00234 9aa315641f9f531d6a2850ac2732127d 452 Pfam PF00696 Amino acid kinase family 2 276 1.3E-44 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 DB29_00234 9aa315641f9f531d6a2850ac2732127d 452 SUPERFAMILY SSF55021 297 361 9.16E-10 T 14-10-2018 DB29_04304 74775c85ba73543e28975d068b2d72c2 219 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 35 170 4.5E-26 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 DB29_04304 74775c85ba73543e28975d068b2d72c2 219 PIRSF PIRSF001435 1 214 5.4E-60 T 14-10-2018 DB29_04304 74775c85ba73543e28975d068b2d72c2 219 SMART SM00478 39 187 1.5E-64 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 DB29_04304 74775c85ba73543e28975d068b2d72c2 219 SUPERFAMILY SSF48150 1 211 1.54E-72 T 14-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 DB29_04304 74775c85ba73543e28975d068b2d72c2 219 ProSitePatterns PS01155 Endonuclease III family signature. 103 130 - T 14-10-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 DB29_04304 74775c85ba73543e28975d068b2d72c2 219 Gene3D G3DSA:1.10.1670.10 16 205 3.6E-82 T 14-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 DB29_04304 74775c85ba73543e28975d068b2d72c2 219 Gene3D G3DSA:1.10.340.30 22 133 3.6E-82 T 14-10-2018 DB29_04304 74775c85ba73543e28975d068b2d72c2 219 Pfam PF00633 Helix-hairpin-helix motif 101 128 8.6E-7 T 14-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 DB29_04304 74775c85ba73543e28975d068b2d72c2 219 TIGRFAM TIGR01083 nth: endonuclease III 7 196 2.1E-84 T 14-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 DB29_04304 74775c85ba73543e28975d068b2d72c2 219 Hamap MF_00942 Endonuclease III [nth]. 2 211 38.535 T 14-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 DB29_01927 4f26d17076a10e320b3a58666064b936 367 SMART SM00670 167 274 5.6E-14 T 14-10-2018 IPR002716 PIN domain DB29_01927 4f26d17076a10e320b3a58666064b936 367 Gene3D G3DSA:3.40.50.1010 164 298 6.1E-55 T 14-10-2018 DB29_01927 4f26d17076a10e320b3a58666064b936 367 SUPERFAMILY SSF88723 168 295 2.19E-24 T 14-10-2018 IPR029060 PIN-like domain superfamily DB29_01977 4a8f4d290935a4db54cbab2171c1b7ed 123 Gene3D G3DSA:3.30.1330.40 1 123 5.6E-55 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 DB29_01977 4a8f4d290935a4db54cbab2171c1b7ed 123 SUPERFAMILY SSF55298 2 123 1.05E-47 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 DB29_01977 4a8f4d290935a4db54cbab2171c1b7ed 123 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 1 122 3.9E-55 T 14-10-2018 IPR006056 RidA family Reactome: R-HSA-8849175 DB29_01977 4a8f4d290935a4db54cbab2171c1b7ed 123 Pfam PF01042 Endoribonuclease L-PSP 7 122 2.8E-45 T 14-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 DB29_02368 d13b09a6f45033c2211d300af1200735 142 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 2 138 2.0E-56 T 14-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 DB29_02368 d13b09a6f45033c2211d300af1200735 142 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 2 141 33.192 T 14-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 DB29_02368 d13b09a6f45033c2211d300af1200735 142 SUPERFAMILY SSF54637 1 139 8.73E-47 T 14-10-2018 IPR029069 HotDog domain superfamily DB29_02368 d13b09a6f45033c2211d300af1200735 142 Gene3D G3DSA:3.10.129.10 1 142 3.1E-57 T 14-10-2018 DB29_02368 d13b09a6f45033c2211d300af1200735 142 Pfam PF07977 FabA-like domain 11 133 2.2E-33 T 14-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 DB29_00712 5c1adf4c0eee8ec93791c5f72e88e79f 630 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 284 624 4.7E-122 T 14-10-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 DB29_00712 5c1adf4c0eee8ec93791c5f72e88e79f 630 SUPERFAMILY SSF52794 174 274 3.31E-35 T 14-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 DB29_00712 5c1adf4c0eee8ec93791c5f72e88e79f 630 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 176 265 1.6E-17 T 14-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 DB29_00712 5c1adf4c0eee8ec93791c5f72e88e79f 630 TIGRFAM TIGR00848 fruA: PTS system, fructose subfamily, IIA component 6 133 1.8E-40 T 14-10-2018 IPR004715 Phosphotransferase system, IIA component fructose subfamily GO:0008982|GO:0009401|GO:0016021 DB29_00712 5c1adf4c0eee8ec93791c5f72e88e79f 630 Gene3D G3DSA:3.40.50.2300 162 273 2.9E-39 T 14-10-2018 DB29_00712 5c1adf4c0eee8ec93791c5f72e88e79f 630 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 176 255 1.3E-30 T 14-10-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202 DB29_00712 5c1adf4c0eee8ec93791c5f72e88e79f 630 SUPERFAMILY SSF55804 1 148 6.67E-43 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 DB29_00712 5c1adf4c0eee8ec93791c5f72e88e79f 630 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 6 148 2.4E-38 T 14-10-2018 IPR002178 PTS EIIA type-2 domain DB29_00712 5c1adf4c0eee8ec93791c5f72e88e79f 630 Gene3D G3DSA:3.40.930.10 1 151 2.2E-47 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 DB29_00712 5c1adf4c0eee8ec93791c5f72e88e79f 630 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 52 68 - T 14-10-2018 IPR002178 PTS EIIA type-2 domain DB29_03965 558261d75231142a2278e6691f7f0836 557 TIGRFAM TIGR03599 YloV: DAK2 domain fusion protein YloV 10 557 9.3E-216 T 14-10-2018 IPR019986 DAK2 domain-containing protein YloV DB29_03965 558261d75231142a2278e6691f7f0836 557 SMART SM01120 35 200 1.7E-74 T 14-10-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 DB29_03965 558261d75231142a2278e6691f7f0836 557 Pfam PF02734 DAK2 domain 35 199 3.7E-45 T 14-10-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 DB29_03965 558261d75231142a2278e6691f7f0836 557 Gene3D G3DSA:1.25.40.340 10 189 1.5E-13 T 14-10-2018 IPR036117 DhaL domain superfamily GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 DB29_03965 558261d75231142a2278e6691f7f0836 557 SUPERFAMILY SSF101473 4 201 1.44E-47 T 14-10-2018 IPR036117 DhaL domain superfamily GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 DB29_03965 558261d75231142a2278e6691f7f0836 557 SMART SM01121 240 557 4.4E-186 T 14-10-2018 IPR033470 Uncharacterised protein, DhaK domain DB29_03965 558261d75231142a2278e6691f7f0836 557 Pfam PF13684 Dihydroxyacetone kinase family 240 557 1.6E-121 T 14-10-2018 IPR033470 Uncharacterised protein, DhaK domain DB29_03452 c222ec1f4623cdedacb4a910a4596e90 274 Pfam PF00106 short chain dehydrogenase 3 183 2.5E-51 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_03452 c222ec1f4623cdedacb4a910a4596e90 274 SUPERFAMILY SSF51735 1 248 6.71E-65 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_03452 c222ec1f4623cdedacb4a910a4596e90 274 Gene3D G3DSA:3.40.50.720 2 272 1.3E-68 T 14-10-2018 DB29_03452 c222ec1f4623cdedacb4a910a4596e90 274 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 126 134 3.2E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_03452 c222ec1f4623cdedacb4a910a4596e90 274 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 73 84 3.2E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_03452 c222ec1f4623cdedacb4a910a4596e90 274 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 146 165 3.2E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_03452 c222ec1f4623cdedacb4a910a4596e90 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 165 7.4E-25 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_03452 c222ec1f4623cdedacb4a910a4596e90 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 7.4E-25 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_03452 c222ec1f4623cdedacb4a910a4596e90 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 120 136 7.4E-25 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_03452 c222ec1f4623cdedacb4a910a4596e90 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 184 7.4E-25 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_03452 c222ec1f4623cdedacb4a910a4596e90 274 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 7.4E-25 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_01889 9ec7ac0adc31e3b7cfc9c504c0fe4bce 61 SUPERFAMILY SSF57716 3 61 1.71E-21 T 14-10-2018 DB29_01889 9ec7ac0adc31e3b7cfc9c504c0fe4bce 61 Gene3D G3DSA:4.10.830.10 1 61 4.1E-30 T 14-10-2018 DB29_01889 9ec7ac0adc31e3b7cfc9c504c0fe4bce 61 Hamap MF_01364_B 30S ribosomal protein S14 type Z [rpsZ]. 1 61 25.894 T 14-10-2018 IPR023053 Ribosomal protein S14, type Z DB29_01889 9ec7ac0adc31e3b7cfc9c504c0fe4bce 61 ProSitePatterns PS00527 Ribosomal protein S14 signature. 23 45 - T 14-10-2018 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB29_01889 9ec7ac0adc31e3b7cfc9c504c0fe4bce 61 Pfam PF00253 Ribosomal protein S14p/S29e 9 60 5.5E-25 T 14-10-2018 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DB29_00280 8fa89a43166d25f15669dc09f7d28ad7 187 PIRSF PIRSF006806 1 184 5.2E-41 T 14-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase DB29_00280 8fa89a43166d25f15669dc09f7d28ad7 187 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 4 180 1.2E-41 T 14-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase DB29_00280 8fa89a43166d25f15669dc09f7d28ad7 187 SUPERFAMILY SSF100950 3 184 1.3E-47 T 14-10-2018 IPR037171 NagB/RpiA transferase-like DB29_00280 8fa89a43166d25f15669dc09f7d28ad7 187 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 4 180 2.3E-52 T 14-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase DB29_00280 8fa89a43166d25f15669dc09f7d28ad7 187 Gene3D G3DSA:3.40.50.10420 1 186 1.4E-57 T 14-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily DB29_00204 880dd97112d4f50eba803c40be7c6b98 254 Pfam PF01522 Polysaccharide deacetylase 57 174 1.3E-34 T 14-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 DB29_00204 880dd97112d4f50eba803c40be7c6b98 254 Gene3D G3DSA:3.20.20.370 43 253 1.0E-73 T 14-10-2018 DB29_00204 880dd97112d4f50eba803c40be7c6b98 254 SUPERFAMILY SSF88713 55 251 2.89E-64 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 DB29_02026 043ba48b72af62169dacd6e6432cfcc8 316 SUPERFAMILY SSF161098 89 300 9.29E-25 T 14-10-2018 IPR035906 MetI-like superfamily DB29_02026 043ba48b72af62169dacd6e6432cfcc8 316 Gene3D G3DSA:1.10.3720.10 85 312 4.5E-30 T 14-10-2018 IPR035906 MetI-like superfamily DB29_02026 043ba48b72af62169dacd6e6432cfcc8 316 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 314 2.2E-44 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DB29_02430 fcf6a5414abf94f3e3059c79219ddd9d 312 SUPERFAMILY SSF161098 70 297 2.88E-58 T 14-10-2018 IPR035906 MetI-like superfamily DB29_02430 fcf6a5414abf94f3e3059c79219ddd9d 312 Gene3D G3DSA:1.10.3720.10 66 308 3.4E-70 T 14-10-2018 IPR035906 MetI-like superfamily DB29_02430 fcf6a5414abf94f3e3059c79219ddd9d 312 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 103 301 3.6E-15 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DB29_00632 2de176afb05643c05b4e671157c837fb 283 Pfam PF12833 Helix-turn-helix domain 191 270 1.3E-20 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DB29_00632 2de176afb05643c05b4e671157c837fb 283 Pfam PF02311 AraC-like ligand binding domain 23 104 1.4E-13 T 14-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 DB29_00632 2de176afb05643c05b4e671157c837fb 283 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 222 265 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 DB29_00632 2de176afb05643c05b4e671157c837fb 283 Gene3D G3DSA:1.10.10.60 167 270 7.9E-26 T 14-10-2018 DB29_00632 2de176afb05643c05b4e671157c837fb 283 SUPERFAMILY SSF46689 168 219 2.42E-5 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DB29_00632 2de176afb05643c05b4e671157c837fb 283 SUPERFAMILY SSF51215 1 151 3.27E-21 T 14-10-2018 IPR037923 Transcription regulator HTH-like DB29_00632 2de176afb05643c05b4e671157c837fb 283 Gene3D G3DSA:2.60.120.280 21 110 5.4E-9 T 14-10-2018 DB29_00632 2de176afb05643c05b4e671157c837fb 283 SMART SM00342 185 269 1.7E-25 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DB29_00632 2de176afb05643c05b4e671157c837fb 283 SUPERFAMILY SSF46689 221 270 5.38E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DB29_03055 41aae8bd56995983bbb5d89b9cb71222 297 Gene3D G3DSA:3.30.420.40 106 295 4.6E-67 T 14-10-2018 DB29_03055 41aae8bd56995983bbb5d89b9cb71222 297 SUPERFAMILY SSF53067 6 286 5.94E-47 T 14-10-2018 DB29_03055 41aae8bd56995983bbb5d89b9cb71222 297 Gene3D G3DSA:3.30.420.40 3 105 5.7E-26 T 14-10-2018 DB29_03055 41aae8bd56995983bbb5d89b9cb71222 297 Pfam PF00480 ROK family 6 285 2.5E-67 T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 DB29_03055 41aae8bd56995983bbb5d89b9cb71222 297 ProSitePatterns PS01125 ROK family signature. 131 156 - T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 DB29_01625 145f66a33721282e705336e27a05e2e7 271 Gene3D G3DSA:2.60.120.10 18 125 2.2E-29 T 14-10-2018 IPR014710 RmlC-like jelly roll fold DB29_01625 145f66a33721282e705336e27a05e2e7 271 Hamap MF_01673 5-deoxy-glucuronate isomerase [iolB]. 1 271 61.719 T 14-10-2018 IPR023770 5-deoxy-glucuronate isomerase, Bacilli GO:0008880|GO:0019310 KEGG: 00562+5.3.1.30 DB29_01625 145f66a33721282e705336e27a05e2e7 271 Gene3D G3DSA:2.60.120.10 126 271 6.4E-58 T 14-10-2018 IPR014710 RmlC-like jelly roll fold DB29_01625 145f66a33721282e705336e27a05e2e7 271 Pfam PF04962 KduI/IolB family 13 268 9.6E-102 T 14-10-2018 IPR021120 KduI/IolB isomerase GO:0016861 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 DB29_01625 145f66a33721282e705336e27a05e2e7 271 TIGRFAM TIGR04378 myo_inos_iolB: 5-deoxy-glucuronate isomerase 23 268 7.9E-101 T 14-10-2018 IPR024203 5-deoxy-glucuronate isomerase, IolB GO:0008880|GO:0019310 KEGG: 00562+5.3.1.30 DB29_01625 145f66a33721282e705336e27a05e2e7 271 PIRSF PIRSF036628 1 271 2.8E-106 T 14-10-2018 IPR024203 5-deoxy-glucuronate isomerase, IolB GO:0008880|GO:0019310 KEGG: 00562+5.3.1.30 DB29_01625 145f66a33721282e705336e27a05e2e7 271 SUPERFAMILY SSF51182 5 257 5.67E-72 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily DB29_04294 7c77f2d671ef87dfb2ad83610f11c19c 302 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 4 277 2.1E-94 T 14-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 DB29_04294 7c77f2d671ef87dfb2ad83610f11c19c 302 Gene3D G3DSA:3.30.1300.10 177 291 2.4E-25 T 14-10-2018 DB29_04294 7c77f2d671ef87dfb2ad83610f11c19c 302 SUPERFAMILY SSF52374 2 279 2.36E-102 T 14-10-2018 DB29_04294 7c77f2d671ef87dfb2ad83610f11c19c 302 Hamap MF_00158 Pantothenate synthetase [panC]. 2 276 37.668 T 14-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 DB29_04294 7c77f2d671ef87dfb2ad83610f11c19c 302 Pfam PF02569 Pantoate-beta-alanine ligase 4 274 9.0E-100 T 14-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 DB29_04294 7c77f2d671ef87dfb2ad83610f11c19c 302 Gene3D G3DSA:3.40.50.620 1 176 6.4E-75 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DB29_03103 ef85957370db33f4c998416c4861031d 422 PIRSF PIRSF005962 1 422 3.4E-112 T 14-10-2018 IPR017439 Amidohydrolase GO:0016787 DB29_03103 ef85957370db33f4c998416c4861031d 422 Pfam PF07687 Peptidase dimerisation domain 222 316 8.6E-13 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain DB29_03103 ef85957370db33f4c998416c4861031d 422 SUPERFAMILY SSF55031 219 326 2.49E-23 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain DB29_03103 ef85957370db33f4c998416c4861031d 422 Pfam PF01546 Peptidase family M20/M25/M40 106 414 1.8E-22 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 DB29_03103 ef85957370db33f4c998416c4861031d 422 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 9 410 1.3E-88 T 14-10-2018 IPR017439 Amidohydrolase GO:0016787 DB29_03103 ef85957370db33f4c998416c4861031d 422 Gene3D G3DSA:3.40.630.10 1 312 2.1E-82 T 14-10-2018 DB29_03103 ef85957370db33f4c998416c4861031d 422 Gene3D G3DSA:3.40.630.10 316 422 6.3E-14 T 14-10-2018 DB29_03103 ef85957370db33f4c998416c4861031d 422 SUPERFAMILY SSF53187 2 421 9.61E-59 T 14-10-2018 DB29_03967 2a6212ca3b068bf44c05b5152cd173dc 220 Pfam PF01842 ACT domain 151 210 7.7E-12 T 14-10-2018 IPR002912 ACT domain DB29_03967 2a6212ca3b068bf44c05b5152cd173dc 220 Gene3D G3DSA:3.30.1330.90 13 135 1.3E-21 T 14-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 DB29_03967 2a6212ca3b068bf44c05b5152cd173dc 220 TIGRFAM TIGR00719 sda_beta: L-serine dehydratase, iron-sulfur-dependent, beta subunit 1 205 1.6E-84 T 14-10-2018 IPR004643 Iron-sulphur-dependent L-serine dehydratase beta subunit GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 DB29_03967 2a6212ca3b068bf44c05b5152cd173dc 220 PIRSF PIRSF036692 1 220 1.6E-97 T 14-10-2018 IPR004643 Iron-sulphur-dependent L-serine dehydratase beta subunit GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 DB29_03967 2a6212ca3b068bf44c05b5152cd173dc 220 Pfam PF03315 Serine dehydratase beta chain 6 75 8.7E-12 T 14-10-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 DB29_03967 2a6212ca3b068bf44c05b5152cd173dc 220 Gene3D G3DSA:3.30.70.260 139 217 7.2E-14 T 14-10-2018 DB29_03967 2a6212ca3b068bf44c05b5152cd173dc 220 SUPERFAMILY SSF55021 136 216 2.29E-16 T 14-10-2018 DB29_03967 2a6212ca3b068bf44c05b5152cd173dc 220 SUPERFAMILY SSF143548 19 137 3.79E-31 T 14-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 DB29_02560 c713229c8697beeb174934225950ced4 344 Gene3D G3DSA:3.40.50.300 12 338 2.3E-100 T 14-10-2018 DB29_02560 c713229c8697beeb174934225950ced4 344 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 242 331 4.9E-29 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DB29_02560 c713229c8697beeb174934225950ced4 344 SUPERFAMILY SSF52540 15 263 2.34E-75 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_02560 c713229c8697beeb174934225950ced4 344 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 244 311 6.0E-18 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DB29_02560 c713229c8697beeb174934225950ced4 344 Pfam PF00005 ABC transporter 42 192 2.0E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB29_02560 c713229c8697beeb174934225950ced4 344 ProSitePatterns PS00211 ABC transporters family signature. 165 179 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB29_02560 c713229c8697beeb174934225950ced4 344 SMART SM00382 50 242 7.2E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_02021 1aad17077584e62216fae2203b755804 221 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 9 156 3.2E-12 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 DB29_02021 1aad17077584e62216fae2203b755804 221 Gene3D G3DSA:1.10.10.10 103 159 4.6E-7 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_02021 1aad17077584e62216fae2203b755804 221 Pfam PF08281 Sigma-70, region 4 108 152 2.0E-6 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DB29_02021 1aad17077584e62216fae2203b755804 221 Gene3D G3DSA:1.10.1740.10 1 82 1.6E-13 T 14-10-2018 DB29_02021 1aad17077584e62216fae2203b755804 221 SUPERFAMILY SSF88659 103 157 9.38E-7 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like DB29_02021 1aad17077584e62216fae2203b755804 221 SUPERFAMILY SSF88946 2 75 1.02E-12 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 DB29_02021 1aad17077584e62216fae2203b755804 221 Pfam PF04542 Sigma-70 region 2 15 79 4.3E-11 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 DB29_04255 a47191c84ddc6afd772921f1928eab9a 273 SMART SM00849 38 227 7.8E-16 T 14-10-2018 IPR001279 Metallo-beta-lactamase DB29_04255 a47191c84ddc6afd772921f1928eab9a 273 Gene3D G3DSA:3.60.15.10 28 271 1.8E-63 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DB29_04255 a47191c84ddc6afd772921f1928eab9a 273 Pfam PF00753 Metallo-beta-lactamase superfamily 35 210 1.6E-15 T 14-10-2018 IPR001279 Metallo-beta-lactamase DB29_04255 a47191c84ddc6afd772921f1928eab9a 273 SUPERFAMILY SSF56281 30 270 4.19E-50 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DB29_01242 88e5a0948ca15d1d5d9cb5f16b21b1f3 419 SUPERFAMILY SSF48452 109 217 1.77E-5 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DB29_01242 88e5a0948ca15d1d5d9cb5f16b21b1f3 419 Pfam PF01381 Helix-turn-helix 7 58 2.0E-7 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DB29_01242 88e5a0948ca15d1d5d9cb5f16b21b1f3 419 SMART SM00028 265 298 30.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DB29_01242 88e5a0948ca15d1d5d9cb5f16b21b1f3 419 SMART SM00028 185 218 10.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DB29_01242 88e5a0948ca15d1d5d9cb5f16b21b1f3 419 Gene3D G3DSA:1.10.260.40 2 62 6.5E-12 T 14-10-2018 DB29_01242 88e5a0948ca15d1d5d9cb5f16b21b1f3 419 SUPERFAMILY SSF48452 188 335 8.86E-15 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DB29_01242 88e5a0948ca15d1d5d9cb5f16b21b1f3 419 SMART SM00530 6 60 2.7E-7 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DB29_01242 88e5a0948ca15d1d5d9cb5f16b21b1f3 419 Pfam PF13181 Tetratricopeptide repeat 189 215 0.13 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DB29_01242 88e5a0948ca15d1d5d9cb5f16b21b1f3 419 Pfam PF13181 Tetratricopeptide repeat 266 293 0.014 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DB29_01242 88e5a0948ca15d1d5d9cb5f16b21b1f3 419 Gene3D G3DSA:1.25.40.10 184 414 3.6E-29 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DB29_01242 88e5a0948ca15d1d5d9cb5f16b21b1f3 419 SUPERFAMILY SSF47413 2 58 1.69E-12 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DB29_03494 095b2c28e0f399214a3855ed3cfa8031 162 SUPERFAMILY SSF55781 13 152 3.93E-38 T 14-10-2018 DB29_03494 095b2c28e0f399214a3855ed3cfa8031 162 Pfam PF13185 GAF domain 40 151 4.7E-10 T 14-10-2018 IPR003018 GAF domain GO:0005515 DB29_03494 095b2c28e0f399214a3855ed3cfa8031 162 Gene3D G3DSA:3.30.450.40 10 161 3.5E-59 T 14-10-2018 IPR029016 GAF-like domain superfamily DB29_03081 691d125d712f3a8af3c56d0e1396dd69 266 SUPERFAMILY SSF53697 91 263 1.09E-28 T 14-10-2018 DB29_03081 691d125d712f3a8af3c56d0e1396dd69 266 Pfam PF01418 Helix-turn-helix domain, rpiR family 13 75 9.6E-16 T 14-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 DB29_03081 691d125d712f3a8af3c56d0e1396dd69 266 SUPERFAMILY SSF46689 4 75 7.7E-18 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DB29_03081 691d125d712f3a8af3c56d0e1396dd69 266 Pfam PF01380 SIS domain 122 230 6.8E-16 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 DB29_03081 691d125d712f3a8af3c56d0e1396dd69 266 Gene3D G3DSA:1.10.10.10 8 78 1.0E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_03081 691d125d712f3a8af3c56d0e1396dd69 266 Gene3D G3DSA:3.40.50.10490 90 264 2.5E-28 T 14-10-2018 DB29_00908 0afaed42260c3b3d5a10f03850683758 512 SUPERFAMILY SSF52540 3 222 3.29E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_00908 0afaed42260c3b3d5a10f03850683758 512 SUPERFAMILY SSF52540 255 487 4.75E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_00908 0afaed42260c3b3d5a10f03850683758 512 Gene3D G3DSA:3.40.50.300 1 238 6.1E-55 T 14-10-2018 DB29_00908 0afaed42260c3b3d5a10f03850683758 512 Gene3D G3DSA:3.40.50.300 252 494 2.4E-42 T 14-10-2018 DB29_00908 0afaed42260c3b3d5a10f03850683758 512 ProSitePatterns PS00211 ABC transporters family signature. 402 416 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB29_00908 0afaed42260c3b3d5a10f03850683758 512 SMART SM00382 282 478 1.4 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_00908 0afaed42260c3b3d5a10f03850683758 512 SMART SM00382 29 220 1.2E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_00908 0afaed42260c3b3d5a10f03850683758 512 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB29_00908 0afaed42260c3b3d5a10f03850683758 512 Pfam PF00005 ABC transporter 274 429 7.3E-18 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB29_00908 0afaed42260c3b3d5a10f03850683758 512 Pfam PF00005 ABC transporter 21 169 2.4E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB29_00381 4c30e0c553a066c26675049e0d8ff95d 275 SUPERFAMILY SSF53613 5 263 1.5E-77 T 14-10-2018 IPR029056 Ribokinase-like DB29_00381 4c30e0c553a066c26675049e0d8ff95d 275 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 7 261 8.1E-98 T 14-10-2018 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 DB29_00381 4c30e0c553a066c26675049e0d8ff95d 275 Pfam PF08543 Phosphomethylpyrimidine kinase 14 259 4.1E-93 T 14-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 DB29_00381 4c30e0c553a066c26675049e0d8ff95d 275 Gene3D G3DSA:3.40.1190.20 2 267 7.5E-98 T 14-10-2018 IPR029056 Ribokinase-like DB29_04032 a76db0146758b6d0689550d468aa1363 159 Gene3D G3DSA:3.30.1330.200 2 158 2.0E-49 T 14-10-2018 IPR038592 CheD-like superfamily DB29_04032 a76db0146758b6d0689550d468aa1363 159 Pfam PF03975 CheD chemotactic sensory transduction 48 151 5.4E-33 T 14-10-2018 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 DB29_04032 a76db0146758b6d0689550d468aa1363 159 SUPERFAMILY SSF64438 7 157 1.74E-44 T 14-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic DB29_04032 a76db0146758b6d0689550d468aa1363 159 Hamap MF_01440 Chemoreceptor glutamine deamidase CheD [cheD]. 1 155 27.179 T 14-10-2018 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 DB29_04181 1862679e4b0703e4a937ea60da908654 125 TIGRFAM TIGR04019 B_thiol_YtxJ: bacillithiol system protein YtxJ 17 118 9.9E-36 T 14-10-2018 IPR022551 Protein of unknown function DUF2847 DB29_04181 1862679e4b0703e4a937ea60da908654 125 SUPERFAMILY SSF52833 12 110 9.91E-6 T 14-10-2018 IPR036249 Thioredoxin-like superfamily DB29_04181 1862679e4b0703e4a937ea60da908654 125 Gene3D G3DSA:3.40.30.10 10 122 1.0E-32 T 14-10-2018 DB29_04181 1862679e4b0703e4a937ea60da908654 125 Pfam PF11009 Protein of unknown function (DUF2847) 17 117 2.0E-34 T 14-10-2018 IPR022551 Protein of unknown function DUF2847 DB29_02888 3012ce5570c38797c4664438802d1af1 206 Pfam PF00080 Copper/zinc superoxide dismutase (SODC) 54 201 1.5E-34 T 14-10-2018 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 DB29_02888 3012ce5570c38797c4664438802d1af1 206 ProSitePatterns PS00332 Copper/Zinc superoxide dismutase signature 2. 190 201 - T 14-10-2018 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 DB29_02888 3012ce5570c38797c4664438802d1af1 206 Gene3D G3DSA:2.60.40.200 45 202 1.4E-46 T 14-10-2018 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 DB29_02888 3012ce5570c38797c4664438802d1af1 206 SUPERFAMILY SSF49329 49 201 2.23E-41 T 14-10-2018 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 DB29_02976 93e3e361a6d3c9ab93d44ba679ae5c77 107 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 5 101 1.3E-23 T 14-10-2018 IPR008407 Branched-chain amino acid transport, AzlD DB29_00396 888bc81d8ca852a35242ed3443d4e683 390 Gene3D G3DSA:3.40.630.10 17 360 8.5E-138 T 14-10-2018 DB29_00396 888bc81d8ca852a35242ed3443d4e683 390 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 18 342 1.4E-67 T 14-10-2018 IPR017439 Amidohydrolase GO:0016787 DB29_00396 888bc81d8ca852a35242ed3443d4e683 390 Pfam PF07687 Peptidase dimerisation domain 171 261 1.6E-10 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain DB29_00396 888bc81d8ca852a35242ed3443d4e683 390 SUPERFAMILY SSF53187 3 373 2.88E-62 T 14-10-2018 DB29_00396 888bc81d8ca852a35242ed3443d4e683 390 SUPERFAMILY SSF55031 166 273 3.72E-24 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain DB29_00396 888bc81d8ca852a35242ed3443d4e683 390 PIRSF PIRSF037226 1 390 4.9E-177 T 14-10-2018 IPR017144 Peptidase M20A, amidohydrolase, predicted DB29_00396 888bc81d8ca852a35242ed3443d4e683 390 Pfam PF01546 Peptidase family M20/M25/M40 78 345 3.3E-6 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 DB29_00396 888bc81d8ca852a35242ed3443d4e683 390 Gene3D G3DSA:3.30.70.360 164 281 8.5E-138 T 14-10-2018 DB29_01713 8b30ec6cb88a7e463dc37f139ed92c06 583 Pfam PF04740 LXG domain of WXG superfamily 3 198 1.1E-51 T 14-10-2018 IPR006829 LXG domain DB29_03869 4b09429e6ea4acd60d09bf84b8ec6163 299 SUPERFAMILY SSF48179 162 289 9.41E-31 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 DB29_03869 4b09429e6ea4acd60d09bf84b8ec6163 299 Gene3D G3DSA:3.40.50.720 1 161 7.9E-52 T 14-10-2018 DB29_03869 4b09429e6ea4acd60d09bf84b8ec6163 299 PIRSF PIRSF000103 1 290 9.1E-73 T 14-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 DB29_03869 4b09429e6ea4acd60d09bf84b8ec6163 299 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 2 159 4.6E-46 T 14-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 DB29_03869 4b09429e6ea4acd60d09bf84b8ec6163 299 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 164 283 9.3E-33 T 14-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 DB29_03869 4b09429e6ea4acd60d09bf84b8ec6163 299 SUPERFAMILY SSF51735 1 162 5.18E-46 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_03869 4b09429e6ea4acd60d09bf84b8ec6163 299 Gene3D G3DSA:1.10.1040.10 162 290 5.2E-33 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 DB29_02424 dcf791574be6f51edccfec87aea911a2 419 Gene3D G3DSA:3.30.70.20 306 412 1.0E-22 T 14-10-2018 DB29_02424 dcf791574be6f51edccfec87aea911a2 419 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 379 390 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DB29_02424 dcf791574be6f51edccfec87aea911a2 419 SUPERFAMILY SSF54862 325 399 1.08E-12 T 14-10-2018 DB29_02424 dcf791574be6f51edccfec87aea911a2 419 TIGRFAM TIGR01037 pyrD_sub1_fam: dihydroorotate dehydrogenase family protein 6 317 9.3E-56 T 14-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 DB29_02424 dcf791574be6f51edccfec87aea911a2 419 Gene3D G3DSA:3.20.20.70 5 305 8.6E-102 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DB29_02424 dcf791574be6f51edccfec87aea911a2 419 SUPERFAMILY SSF51395 1 317 6.11E-71 T 14-10-2018 DB29_02424 dcf791574be6f51edccfec87aea911a2 419 Pfam PF14697 4Fe-4S dicluster domain 335 397 1.9E-22 T 14-10-2018 DB29_02424 dcf791574be6f51edccfec87aea911a2 419 Pfam PF01180 Dihydroorotate dehydrogenase 8 302 5.1E-31 T 14-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 DB29_00486 01011c93ac1825f90421ad3dd064d1fb 238 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 8 219 2.0E-57 T 14-10-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 DB29_00737 e9e52d7f292045afb0a5c9f689350bfc 266 Gene3D G3DSA:1.10.3730.10 163 266 7.9E-27 T 14-10-2018 DB29_00737 e9e52d7f292045afb0a5c9f689350bfc 266 PIRSF PIRSF000193 2 266 1.7E-63 T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 DB29_00737 e9e52d7f292045afb0a5c9f689350bfc 266 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 2 264 20.3 T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 DB29_00737 e9e52d7f292045afb0a5c9f689350bfc 266 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 161 262 9.9E-27 T 14-10-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 DB29_00737 e9e52d7f292045afb0a5c9f689350bfc 266 SUPERFAMILY SSF48179 160 263 4.08E-24 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 DB29_00737 e9e52d7f292045afb0a5c9f689350bfc 266 SUPERFAMILY SSF51735 4 155 1.03E-27 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_00737 e9e52d7f292045afb0a5c9f689350bfc 266 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 4 98 1.7E-16 T 14-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal DB29_00737 e9e52d7f292045afb0a5c9f689350bfc 266 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 4 262 6.4E-65 T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 DB29_00737 e9e52d7f292045afb0a5c9f689350bfc 266 Gene3D G3DSA:3.40.50.720 2 162 1.3E-36 T 14-10-2018 DB29_00024 0446914f08fb2365d5d8c0bdea9590a5 238 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 235 3.6E-71 T 14-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DB29_00024 0446914f08fb2365d5d8c0bdea9590a5 238 SUPERFAMILY SSF75625 1 236 1.83E-81 T 14-10-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DB29_00024 0446914f08fb2365d5d8c0bdea9590a5 238 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 1 237 31.275 T 14-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DB29_00024 0446914f08fb2365d5d8c0bdea9590a5 238 Gene3D G3DSA:1.10.10.200 2 79 2.5E-25 T 14-10-2018 IPR017856 Integrase-like, N-terminal DB29_00024 0446914f08fb2365d5d8c0bdea9590a5 238 Gene3D G3DSA:3.30.70.980 83 234 6.8E-46 T 14-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DB29_00024 0446914f08fb2365d5d8c0bdea9590a5 238 Pfam PF01709 Transcriptional regulator 4 235 3.8E-82 T 14-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DB29_00024 0446914f08fb2365d5d8c0bdea9590a5 238 Hamap MF_00918 Probable transcriptional regulatory protein YeeN [yeeN]. 1 238 56.18 T 14-10-2018 IPR026562 Probable transcriptional regulatory protein YeeN DB29_00024 0446914f08fb2365d5d8c0bdea9590a5 238 Gene3D G3DSA:3.30.70.980 131 201 6.8E-46 T 14-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DB29_03974 314c02f737aff8fa31bdfdba48640088 77 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 55 76 6.0E-5 T 14-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 DB29_03974 314c02f737aff8fa31bdfdba48640088 77 SUPERFAMILY SSF47336 3 76 3.01E-21 T 14-10-2018 IPR036736 ACP-like superfamily DB29_03974 314c02f737aff8fa31bdfdba48640088 77 Pfam PF00550 Phosphopantetheine attachment site 6 73 5.0E-14 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain DB29_03974 314c02f737aff8fa31bdfdba48640088 77 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 22.05 T 14-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 DB29_03974 314c02f737aff8fa31bdfdba48640088 77 Gene3D G3DSA:1.10.1200.10 1 77 3.7E-27 T 14-10-2018 IPR036736 ACP-like superfamily DB29_03974 314c02f737aff8fa31bdfdba48640088 77 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 3 77 4.1E-33 T 14-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 DB29_02851 8f8407cc52247a40036e25195bf6ba6a 256 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB29_02851 8f8407cc52247a40036e25195bf6ba6a 256 SUPERFAMILY SSF52540 2 228 5.22E-57 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_02851 8f8407cc52247a40036e25195bf6ba6a 256 Pfam PF00005 ABC transporter 18 165 2.3E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB29_02851 8f8407cc52247a40036e25195bf6ba6a 256 Gene3D G3DSA:3.40.50.300 1 251 2.4E-64 T 14-10-2018 DB29_02851 8f8407cc52247a40036e25195bf6ba6a 256 SMART SM00382 26 215 1.3E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_00355 748f4361c7facc8e55afc04d6f4f245b 372 Pfam PF03418 Germination protease 16 371 1.9E-190 T 14-10-2018 IPR005080 Peptidase A25, germination protease GO:0006508|GO:0008233|GO:0009847 DB29_00355 748f4361c7facc8e55afc04d6f4f245b 372 Hamap MF_00626 Germination protease [gpr]. 1 372 156.217 T 14-10-2018 IPR005080 Peptidase A25, germination protease GO:0006508|GO:0008233|GO:0009847 DB29_00355 748f4361c7facc8e55afc04d6f4f245b 372 PIRSF PIRSF019549 2 372 5.0E-184 T 14-10-2018 IPR005080 Peptidase A25, germination protease GO:0006508|GO:0008233|GO:0009847 DB29_00355 748f4361c7facc8e55afc04d6f4f245b 372 Gene3D G3DSA:3.40.50.1450 2 372 1.1E-127 T 14-10-2018 IPR023430 Peptidase HybD-like domain superfamily DB29_00355 748f4361c7facc8e55afc04d6f4f245b 372 ProDom PD041835 PROTEASE GERMINATION HYDROLASE SPORE GPR ENDOPEPTIDASE PROTEINASE ZYMOGEN PRECURSOR PEPTIDASE 9 372 0.0 T 14-10-2018 IPR005080 Peptidase A25, germination protease GO:0006508|GO:0008233|GO:0009847 DB29_00355 748f4361c7facc8e55afc04d6f4f245b 372 SUPERFAMILY SSF53163 3 372 1.26E-127 T 14-10-2018 IPR023430 Peptidase HybD-like domain superfamily DB29_00355 748f4361c7facc8e55afc04d6f4f245b 372 TIGRFAM TIGR01441 GPR: GPR endopeptidase 10 372 1.2E-173 T 14-10-2018 IPR005080 Peptidase A25, germination protease GO:0006508|GO:0008233|GO:0009847 DB29_00230 a173f8eb945f18ac66992c7b1d4afe11 372 Pfam PF00696 Amino acid kinase family 5 234 1.5E-46 T 14-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 DB29_00230 a173f8eb945f18ac66992c7b1d4afe11 372 Pfam PF01472 PUA domain 277 345 5.1E-16 T 14-10-2018 IPR002478 PUA domain GO:0003723 DB29_00230 a173f8eb945f18ac66992c7b1d4afe11 372 SMART SM00359 277 355 2.6E-11 T 14-10-2018 IPR002478 PUA domain GO:0003723 DB29_00230 a173f8eb945f18ac66992c7b1d4afe11 372 Gene3D G3DSA:2.30.130.10 266 365 1.2E-24 T 14-10-2018 IPR036974 PUA domain superfamily GO:0003723 DB29_00230 a173f8eb945f18ac66992c7b1d4afe11 372 Hamap MF_00456 Glutamate 5-kinase [proB]. 4 258 33.485 T 14-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 DB29_00230 a173f8eb945f18ac66992c7b1d4afe11 372 TIGRFAM TIGR01027 proB: glutamate 5-kinase 5 364 3.2E-121 T 14-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 DB29_00230 a173f8eb945f18ac66992c7b1d4afe11 372 ProSitePatterns PS00902 Glutamate 5-kinase signature. 206 223 - T 14-10-2018 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 DB29_00230 a173f8eb945f18ac66992c7b1d4afe11 372 PIRSF PIRSF000729 1 367 1.6E-126 T 14-10-2018 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 DB29_00230 a173f8eb945f18ac66992c7b1d4afe11 372 SUPERFAMILY SSF53633 5 254 5.76E-65 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily DB29_00230 a173f8eb945f18ac66992c7b1d4afe11 372 Gene3D G3DSA:3.40.1160.10 2 262 5.1E-82 T 14-10-2018 IPR036393 Acetylglutamate kinase-like superfamily DB29_00230 a173f8eb945f18ac66992c7b1d4afe11 372 PRINTS PR00474 Glutamate 5-kinase family signature 75 103 1.6E-48 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 DB29_00230 a173f8eb945f18ac66992c7b1d4afe11 372 PRINTS PR00474 Glutamate 5-kinase family signature 115 136 1.6E-48 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 DB29_00230 a173f8eb945f18ac66992c7b1d4afe11 372 PRINTS PR00474 Glutamate 5-kinase family signature 41 55 1.6E-48 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 DB29_00230 a173f8eb945f18ac66992c7b1d4afe11 372 PRINTS PR00474 Glutamate 5-kinase family signature 147 174 1.6E-48 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 DB29_00230 a173f8eb945f18ac66992c7b1d4afe11 372 PRINTS PR00474 Glutamate 5-kinase family signature 208 228 1.6E-48 T 14-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 DB29_00230 a173f8eb945f18ac66992c7b1d4afe11 372 SUPERFAMILY SSF88697 277 363 6.63E-14 T 14-10-2018 IPR015947 PUA-like superfamily DB29_04095 38f0825ed19709d541abd59c5ff48155 310 Gene3D G3DSA:1.10.20.140 117 188 4.7E-102 T 14-10-2018 DB29_04095 38f0825ed19709d541abd59c5ff48155 310 SUPERFAMILY SSF52540 6 161 2.2E-19 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_04095 38f0825ed19709d541abd59c5ff48155 310 Gene3D G3DSA:3.40.50.300 6 199 4.7E-102 T 14-10-2018 DB29_04095 38f0825ed19709d541abd59c5ff48155 310 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 7 289 3.4E-102 T 14-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 DB29_04095 38f0825ed19709d541abd59c5ff48155 310 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 6 305 30.504 T 14-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 DB29_04095 38f0825ed19709d541abd59c5ff48155 310 Pfam PF01715 IPP transferase 39 281 2.5E-84 T 14-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 DB29_04095 38f0825ed19709d541abd59c5ff48155 310 Gene3D G3DSA:1.10.287.890 200 279 4.7E-102 T 14-10-2018 DB29_00370 599332e5619b6aa0fbbda0acb7e9b655 372 TIGRFAM TIGR03597 GTPase_YqeH: ribosome biogenesis GTPase YqeH 9 370 2.9E-148 T 14-10-2018 IPR019988 GTP-binding protein, riobosome biogenesis, YqeH DB29_00370 599332e5619b6aa0fbbda0acb7e9b655 372 Pfam PF01926 50S ribosome-binding GTPase 166 228 1.2E-11 T 14-10-2018 IPR006073 GTP binding domain GO:0005525 DB29_00370 599332e5619b6aa0fbbda0acb7e9b655 372 SUPERFAMILY SSF52540 74 282 1.4E-26 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_00370 599332e5619b6aa0fbbda0acb7e9b655 372 Gene3D G3DSA:3.40.50.300 60 229 4.4E-45 T 14-10-2018 DB29_01800 f117119218c71728d54188d3b8571694 588 SUPERFAMILY SSF56601 363 583 9.39E-34 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like DB29_01800 f117119218c71728d54188d3b8571694 588 Pfam PF00905 Penicillin binding protein transpeptidase domain 386 578 7.8E-32 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 DB29_01800 f117119218c71728d54188d3b8571694 588 Pfam PF05569 BlaR1 peptidase M56 11 302 6.4E-57 T 14-10-2018 IPR008756 Peptidase M56 DB29_01800 f117119218c71728d54188d3b8571694 588 Gene3D G3DSA:3.40.710.10 335 588 1.9E-88 T 14-10-2018 DB29_01880 878ae191da6385224c6e52c6b8f7c2d9 248 Gene3D G3DSA:3.90.230.10 1 248 4.0E-106 T 14-10-2018 DB29_01880 878ae191da6385224c6e52c6b8f7c2d9 248 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 2 247 1.2E-99 T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 DB29_01880 878ae191da6385224c6e52c6b8f7c2d9 248 Pfam PF00557 Metallopeptidase family M24 12 239 1.8E-55 T 14-10-2018 IPR000994 Peptidase M24 DB29_01880 878ae191da6385224c6e52c6b8f7c2d9 248 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 165 183 - T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 DB29_01880 878ae191da6385224c6e52c6b8f7c2d9 248 SUPERFAMILY SSF55920 1 247 2.36E-91 T 14-10-2018 IPR036005 Creatinase/aminopeptidase-like DB29_01880 878ae191da6385224c6e52c6b8f7c2d9 248 Hamap MF_01974 Methionine aminopeptidase [map]. 2 248 42.526 T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 DB29_01880 878ae191da6385224c6e52c6b8f7c2d9 248 PRINTS PR00599 Methionine aminopeptidase-1 signature 159 171 6.8E-24 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 DB29_01880 878ae191da6385224c6e52c6b8f7c2d9 248 PRINTS PR00599 Methionine aminopeptidase-1 signature 89 105 6.8E-24 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 DB29_01880 878ae191da6385224c6e52c6b8f7c2d9 248 PRINTS PR00599 Methionine aminopeptidase-1 signature 67 80 6.8E-24 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 DB29_01880 878ae191da6385224c6e52c6b8f7c2d9 248 PRINTS PR00599 Methionine aminopeptidase-1 signature 190 202 6.8E-24 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 DB29_03425 b0ce33195ba3a2dcd90eca1ca9d99999 252 Pfam PF00005 ABC transporter 23 158 2.7E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB29_03425 b0ce33195ba3a2dcd90eca1ca9d99999 252 SMART SM00382 32 208 6.5E-19 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_03425 b0ce33195ba3a2dcd90eca1ca9d99999 252 Gene3D G3DSA:3.40.50.300 2 247 1.2E-61 T 14-10-2018 DB29_03425 b0ce33195ba3a2dcd90eca1ca9d99999 252 ProSitePatterns PS00211 ABC transporters family signature. 131 145 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB29_03425 b0ce33195ba3a2dcd90eca1ca9d99999 252 SUPERFAMILY SSF52540 4 223 4.53E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_04122 e0264cc62d1e7ab6ac19268ecd447f4e 584 ProSitePatterns PS00211 ABC transporters family signature. 474 488 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB29_04122 e0264cc62d1e7ab6ac19268ecd447f4e 584 SUPERFAMILY SSF52540 330 573 3.26E-81 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_04122 e0264cc62d1e7ab6ac19268ecd447f4e 584 SUPERFAMILY SSF90123 7 320 1.7E-70 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DB29_04122 e0264cc62d1e7ab6ac19268ecd447f4e 584 Gene3D G3DSA:3.40.50.300 331 582 2.2E-80 T 14-10-2018 DB29_04122 e0264cc62d1e7ab6ac19268ecd447f4e 584 Pfam PF00005 ABC transporter 353 501 4.2E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB29_04122 e0264cc62d1e7ab6ac19268ecd447f4e 584 Gene3D G3DSA:1.20.1560.10 6 320 1.8E-76 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DB29_04122 e0264cc62d1e7ab6ac19268ecd447f4e 584 Pfam PF00664 ABC transporter transmembrane region 22 291 1.3E-40 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 DB29_04122 e0264cc62d1e7ab6ac19268ecd447f4e 584 SMART SM00382 362 548 1.7E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_02367 5ceced1be3dbcf9543fa745e3324b6f1 252 Gene3D G3DSA:3.40.50.1820 1 248 1.4E-67 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DB29_02367 5ceced1be3dbcf9543fa745e3324b6f1 252 SUPERFAMILY SSF53474 3 242 1.55E-41 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DB29_02367 5ceced1be3dbcf9543fa745e3324b6f1 252 Pfam PF00756 Putative esterase 10 235 1.8E-21 T 14-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 DB29_02839 8be2e37040d3997c130e08e8dc88eac3 417 SUPERFAMILY SSF103473 8 410 2.75E-46 T 14-10-2018 IPR036259 MFS transporter superfamily DB29_02839 8be2e37040d3997c130e08e8dc88eac3 417 Pfam PF07690 Major Facilitator Superfamily 263 400 1.3E-8 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DB29_02839 8be2e37040d3997c130e08e8dc88eac3 417 Pfam PF07690 Major Facilitator Superfamily 21 240 9.8E-22 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DB29_02839 8be2e37040d3997c130e08e8dc88eac3 417 Gene3D G3DSA:1.20.1250.20 14 400 2.6E-41 T 14-10-2018 DB29_02839 8be2e37040d3997c130e08e8dc88eac3 417 ProSitePatterns PS00216 Sugar transport proteins signature 1. 62 79 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 DB29_01955 dfb3b55e447699cdf4e97fd870dd08c0 187 Pfam PF09578 Spore cortex protein YabQ (Spore_YabQ) 12 87 3.5E-19 T 14-10-2018 IPR019074 Spore cortex biosynthesis protein, YabQ-like DB29_01955 dfb3b55e447699cdf4e97fd870dd08c0 187 TIGRFAM TIGR02893 spore_yabQ: spore cortex biosynthesis protein YabQ 3 130 1.3E-48 T 14-10-2018 IPR014242 Spore cortex biosynthesis protein, YabQ DB29_00886 10d597908690ab565037574b0dff1c7f 660 SUPERFAMILY SSF52016 440 638 3.53E-38 T 14-10-2018 DB29_00886 10d597908690ab565037574b0dff1c7f 660 Pfam PF00920 Dehydratase family 86 581 5.2E-117 T 14-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 DB29_00886 10d597908690ab565037574b0dff1c7f 660 Gene3D G3DSA:3.50.30.80 437 587 1.4E-39 T 14-10-2018 DB29_00886 10d597908690ab565037574b0dff1c7f 660 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 162 172 - T 14-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 DB29_00886 10d597908690ab565037574b0dff1c7f 660 SUPERFAMILY SSF143975 48 408 5.36E-92 T 14-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 DB29_00886 10d597908690ab565037574b0dff1c7f 660 TIGRFAM TIGR03432 yjhG_yagF: putative dehydratase, YjhG/YagF family 8 646 0.0 T 14-10-2018 IPR017798 D-xylonate dehydratase YjhG/YagF GO:0050401 KEGG: 00040+4.2.1.82|MetaCyc: PWY-6760|MetaCyc: PWY-7178|MetaCyc: PWY-7294 DB29_00886 10d597908690ab565037574b0dff1c7f 660 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 529 540 - T 14-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 DB29_00375 0cea46662ab97eddb7bc9d04e5eb50fb 112 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 5 107 1.4E-29 T 14-10-2018 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like DB29_03051 c879dce6060d7e7b4575000d9703c8d3 259 SUPERFAMILY SSF52540 3 226 9.63E-66 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_03051 c879dce6060d7e7b4575000d9703c8d3 259 SMART SM00382 34 222 9.3E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_03051 c879dce6060d7e7b4575000d9703c8d3 259 Pfam PF00005 ABC transporter 28 173 2.8E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB29_03051 c879dce6060d7e7b4575000d9703c8d3 259 Gene3D G3DSA:3.40.50.300 1 248 1.4E-65 T 14-10-2018 DB29_03856 da3e218c7c84d1b0f1244e3875a12cb7 585 Gene3D G3DSA:3.90.76.10 82 216 2.0E-133 T 14-10-2018 DB29_03856 da3e218c7c84d1b0f1244e3875a12cb7 585 Gene3D G3DSA:3.40.190.10 63 567 2.0E-133 T 14-10-2018 DB29_03856 da3e218c7c84d1b0f1244e3875a12cb7 585 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 99 121 - T 14-10-2018 IPR023765 Solute-binding protein family 5, conserved site DB29_03856 da3e218c7c84d1b0f1244e3875a12cb7 585 Gene3D G3DSA:3.10.105.10 312 553 2.0E-133 T 14-10-2018 DB29_03856 da3e218c7c84d1b0f1244e3875a12cb7 585 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 94 492 6.7E-89 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain DB29_03856 da3e218c7c84d1b0f1244e3875a12cb7 585 SUPERFAMILY SSF53850 46 576 6.52E-118 T 14-10-2018 DB29_03856 da3e218c7c84d1b0f1244e3875a12cb7 585 PIRSF PIRSF002741 6 585 1.4E-93 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 DB29_00456 c88e0a86b2e781cee452b70809ee1b47 516 PIRSF PIRSF038958 1 516 1.8E-200 T 14-10-2018 IPR024923 Peptidoglycan biosynthesis protein, SpoVB-type DB29_00456 c88e0a86b2e781cee452b70809ee1b47 516 Pfam PF01943 Polysaccharide biosynthesis protein 6 306 2.6E-49 T 14-10-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 DB29_00456 c88e0a86b2e781cee452b70809ee1b47 516 TIGRFAM TIGR02900 spore_V_B: stage V sporulation protein B 6 493 2.4E-167 T 14-10-2018 IPR014249 Sporulation stage V protein B DB29_00456 c88e0a86b2e781cee452b70809ee1b47 516 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 358 500 3.3E-17 T 14-10-2018 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain DB29_03877 fd85fbd00fb43ed338b45eec16400a19 1149 Pfam PF00364 Biotin-requiring enzyme 1081 1147 7.6E-17 T 14-10-2018 IPR000089 Biotin/lipoyl attachment DB29_03877 fd85fbd00fb43ed338b45eec16400a19 1149 SUPERFAMILY SSF52440 3 118 7.91E-45 T 14-10-2018 IPR016185 Pre-ATP-grasp domain superfamily DB29_03877 fd85fbd00fb43ed338b45eec16400a19 1149 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 292 299 - T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 DB29_03877 fd85fbd00fb43ed338b45eec16400a19 1149 Pfam PF02436 Conserved carboxylase domain 831 1031 8.1E-78 T 14-10-2018 IPR003379 Carboxylase, conserved domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 DB29_03877 fd85fbd00fb43ed338b45eec16400a19 1149 Gene3D G3DSA:1.10.472.90 821 945 8.5E-284 T 14-10-2018 DB29_03877 fd85fbd00fb43ed338b45eec16400a19 1149 Gene3D G3DSA:3.20.20.70 516 820 8.5E-284 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DB29_03877 fd85fbd00fb43ed338b45eec16400a19 1149 Pfam PF00682 HMGL-like 536 805 3.8E-23 T 14-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 DB29_03877 fd85fbd00fb43ed338b45eec16400a19 1149 TIGRFAM TIGR01235 pyruv_carbox: pyruvate carboxylase 9 1147 0.0 T 14-10-2018 IPR005930 Pyruvate carboxylase GO:0004736|GO:0005524|GO:0006090|GO:0006094|GO:0009374 KEGG: 00020+6.4.1.1|KEGG: 00620+6.4.1.1|KEGG: 00720+6.4.1.1|MetaCyc: PWY-5750|MetaCyc: PWY-6142|MetaCyc: PWY-6146|Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 DB29_03877 fd85fbd00fb43ed338b45eec16400a19 1149 Gene3D G3DSA:3.30.470.130 1 463 2.1E-197 T 14-10-2018 DB29_03877 fd85fbd00fb43ed338b45eec16400a19 1149 SUPERFAMILY SSF56059 89 370 4.77E-71 T 14-10-2018 DB29_03877 fd85fbd00fb43ed338b45eec16400a19 1149 SUPERFAMILY SSF51569 528 839 2.01E-81 T 14-10-2018 DB29_03877 fd85fbd00fb43ed338b45eec16400a19 1149 Gene3D G3DSA:1.10.10.2790 946 981 8.5E-284 T 14-10-2018 DB29_03877 fd85fbd00fb43ed338b45eec16400a19 1149 Gene3D G3DSA:2.40.50.100 1071 1148 2.4E-25 T 14-10-2018 DB29_03877 fd85fbd00fb43ed338b45eec16400a19 1149 Pfam PF02785 Biotin carboxylase C-terminal domain 348 456 2.4E-31 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 DB29_03877 fd85fbd00fb43ed338b45eec16400a19 1149 SUPERFAMILY SSF51230 1069 1147 1.09E-21 T 14-10-2018 IPR011053 Single hybrid motif DB29_03877 fd85fbd00fb43ed338b45eec16400a19 1149 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 121 329 2.0E-82 T 14-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 DB29_03877 fd85fbd00fb43ed338b45eec16400a19 1149 PIRSF PIRSF001594 2 1149 0.0 T 14-10-2018 IPR005930 Pyruvate carboxylase GO:0004736|GO:0005524|GO:0006090|GO:0006094|GO:0009374 KEGG: 00020+6.4.1.1|KEGG: 00620+6.4.1.1|KEGG: 00720+6.4.1.1|MetaCyc: PWY-5750|MetaCyc: PWY-6142|MetaCyc: PWY-6146|Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 DB29_03877 fd85fbd00fb43ed338b45eec16400a19 1149 SMART SM00878 348 455 1.7E-51 T 14-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 DB29_03877 fd85fbd00fb43ed338b45eec16400a19 1149 SUPERFAMILY SSF51246 344 462 7.32E-37 T 14-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 DB29_03877 fd85fbd00fb43ed338b45eec16400a19 1149 Pfam PF00289 Biotin carboxylase, N-terminal domain 7 115 4.4E-42 T 14-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 DB29_03877 fd85fbd00fb43ed338b45eec16400a19 1149 Gene3D G3DSA:3.10.600.10 509 1062 8.5E-284 T 14-10-2018 DB29_03877 fd85fbd00fb43ed338b45eec16400a19 1149 SUPERFAMILY SSF89000 836 1012 5.89E-59 T 14-10-2018 DB29_01412 5ae2c9313ebbfe54bbba281b57fb0f2d 259 Pfam PF01903 CbiX 142 243 1.9E-19 T 14-10-2018 IPR002762 Cobalamin (vitamin B12) biosynthesis CbiX GO:0009236|GO:0016852 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377 DB29_01412 5ae2c9313ebbfe54bbba281b57fb0f2d 259 Pfam PF01903 CbiX 9 113 1.5E-22 T 14-10-2018 IPR002762 Cobalamin (vitamin B12) biosynthesis CbiX GO:0009236|GO:0016852 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377 DB29_01412 5ae2c9313ebbfe54bbba281b57fb0f2d 259 Gene3D G3DSA:3.40.50.1400 1 121 1.3E-23 T 14-10-2018 DB29_01412 5ae2c9313ebbfe54bbba281b57fb0f2d 259 Gene3D G3DSA:3.40.50.1400 134 257 7.2E-21 T 14-10-2018 DB29_01412 5ae2c9313ebbfe54bbba281b57fb0f2d 259 SUPERFAMILY SSF53800 1 251 9.81E-49 T 14-10-2018 DB29_01756 70ee1fb46cdd956f3665d921f6585ad5 531 Gene3D G3DSA:1.10.10.60 477 531 9.7E-16 T 14-10-2018 DB29_01756 70ee1fb46cdd956f3665d921f6585ad5 531 Pfam PF02954 Bacterial regulatory protein, Fis family 492 531 6.9E-14 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DB29_01756 70ee1fb46cdd956f3665d921f6585ad5 531 SUPERFAMILY SSF46689 451 531 6.09E-15 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DB29_01756 70ee1fb46cdd956f3665d921f6585ad5 531 Gene3D G3DSA:3.40.50.2300 6 181 2.0E-50 T 14-10-2018 DB29_01756 70ee1fb46cdd956f3665d921f6585ad5 531 Gene3D G3DSA:3.40.50.10660 79 168 2.0E-50 T 14-10-2018 DB29_01756 70ee1fb46cdd956f3665d921f6585ad5 531 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 516 531 3.2E-6 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DB29_01756 70ee1fb46cdd956f3665d921f6585ad5 531 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 499 516 3.2E-6 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DB29_01756 70ee1fb46cdd956f3665d921f6585ad5 531 SUPERFAMILY SSF159800 5 182 1.83E-44 T 14-10-2018 DB29_01756 70ee1fb46cdd956f3665d921f6585ad5 531 Pfam PF06506 Propionate catabolism activator 27 184 6.0E-45 T 14-10-2018 IPR010524 Signal transduction response regulator, propionate catabolism activator, N-terminal GO:0000156|GO:0000160|GO:0003677|GO:0005524 DB29_00813 2025bc755926c5fe5a089ef060a1c782 215 Pfam PF13309 HTH domain 149 208 1.2E-19 T 14-10-2018 IPR039445 Transcriptional regulator DauR-like, HTH domain DB29_00813 2025bc755926c5fe5a089ef060a1c782 215 ProDom PD037769 DNA-BINDING YHEO UNCHARACTERIZED BACTERIA SIMILAR HI0575 CONTAINING TRANSCRIPTION REGULATOR HELIX-TURN-HELIX 1 120 7.0E-63 T 14-10-2018 IPR013559 YheO-like DB29_00813 2025bc755926c5fe5a089ef060a1c782 215 Pfam PF08348 YheO-like PAS domain 7 116 5.5E-32 T 14-10-2018 IPR013559 YheO-like DB29_02642 f9eab16b2479319050fa68966e4704e9 441 SUPERFAMILY SSF51735 3 165 9.57E-54 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_02642 f9eab16b2479319050fa68966e4704e9 441 SUPERFAMILY SSF56327 168 441 5.48E-91 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 DB29_02642 f9eab16b2479319050fa68966e4704e9 441 Gene3D G3DSA:3.40.50.720 1 166 2.9E-58 T 14-10-2018 DB29_02642 f9eab16b2479319050fa68966e4704e9 441 Gene3D G3DSA:3.90.110.10 167 441 1.8E-95 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 DB29_02642 f9eab16b2479319050fa68966e4704e9 441 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 195 416 1.7E-48 T 14-10-2018 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 DB29_02642 f9eab16b2479319050fa68966e4704e9 441 ProSitePatterns PS01324 Glycosyl hydrolases family 4 signature. 138 169 - T 14-10-2018 IPR019802 Glycoside hydrolase, family 4, conserved site GO:0004553|GO:0005975 DB29_02642 f9eab16b2479319050fa68966e4704e9 441 Pfam PF02056 Family 4 glycosyl hydrolase 6 183 2.7E-65 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 DB29_02642 f9eab16b2479319050fa68966e4704e9 441 PRINTS PR00732 Glycosyl hydrolase family 4 signature 164 175 2.6E-58 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 DB29_02642 f9eab16b2479319050fa68966e4704e9 441 PRINTS PR00732 Glycosyl hydrolase family 4 signature 95 108 2.6E-58 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 DB29_02642 f9eab16b2479319050fa68966e4704e9 441 PRINTS PR00732 Glycosyl hydrolase family 4 signature 191 203 2.6E-58 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 DB29_02642 f9eab16b2479319050fa68966e4704e9 441 PRINTS PR00732 Glycosyl hydrolase family 4 signature 109 129 2.6E-58 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 DB29_02642 f9eab16b2479319050fa68966e4704e9 441 PRINTS PR00732 Glycosyl hydrolase family 4 signature 138 155 2.6E-58 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 DB29_02642 f9eab16b2479319050fa68966e4704e9 441 PRINTS PR00732 Glycosyl hydrolase family 4 signature 5 20 2.6E-58 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 DB29_02642 f9eab16b2479319050fa68966e4704e9 441 PRINTS PR00732 Glycosyl hydrolase family 4 signature 74 90 2.6E-58 T 14-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 DB29_03954 46d8fa113e7e9eea7d71dd24d96ab99c 401 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 185 367 2.1E-72 T 14-10-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 DB29_03954 46d8fa113e7e9eea7d71dd24d96ab99c 401 SUPERFAMILY SSF52507 1 177 3.01E-62 T 14-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 DB29_03954 46d8fa113e7e9eea7d71dd24d96ab99c 401 Gene3D G3DSA:3.40.50.10300 186 400 1.9E-81 T 14-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 DB29_03954 46d8fa113e7e9eea7d71dd24d96ab99c 401 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 2 392 7.7E-152 T 14-10-2018 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|MetaCyc: PWY-7851 DB29_03954 46d8fa113e7e9eea7d71dd24d96ab99c 401 SUPERFAMILY SSF102645 184 397 1.11E-74 T 14-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 DB29_03954 46d8fa113e7e9eea7d71dd24d96ab99c 401 Gene3D G3DSA:3.40.50.1950 1 185 1.8E-61 T 14-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 DB29_03954 46d8fa113e7e9eea7d71dd24d96ab99c 401 Pfam PF02441 Flavoprotein 5 175 1.4E-45 T 14-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 DB29_01287 9d9f2d9109373c3866436cc506951ee5 502 SUPERFAMILY SSF55785 387 494 2.62E-29 T 14-10-2018 IPR035965 PAS domain superfamily DB29_01287 9d9f2d9109373c3866436cc506951ee5 502 SMART SM00091 382 448 2.0E-6 T 14-10-2018 IPR000014 PAS domain DB29_01287 9d9f2d9109373c3866436cc506951ee5 502 Pfam PF07690 Major Facilitator Superfamily 14 339 5.9E-40 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DB29_01287 9d9f2d9109373c3866436cc506951ee5 502 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 385 496 2.9E-19 T 14-10-2018 IPR000014 PAS domain DB29_01287 9d9f2d9109373c3866436cc506951ee5 502 SMART SM00086 454 496 1.1E-6 T 14-10-2018 IPR001610 PAC motif DB29_01287 9d9f2d9109373c3866436cc506951ee5 502 Gene3D G3DSA:3.30.450.20 379 502 3.3E-38 T 14-10-2018 DB29_01287 9d9f2d9109373c3866436cc506951ee5 502 Pfam PF13426 PAS domain 394 495 1.9E-16 T 14-10-2018 IPR000014 PAS domain DB29_01287 9d9f2d9109373c3866436cc506951ee5 502 SUPERFAMILY SSF103473 11 379 8.76E-55 T 14-10-2018 IPR036259 MFS transporter superfamily DB29_01287 9d9f2d9109373c3866436cc506951ee5 502 Gene3D G3DSA:1.20.1250.20 1 378 5.7E-84 T 14-10-2018 DB29_01430 ef0539696519dcb83803dece74d63b42 181 SUPERFAMILY SSF52218 3 170 2.99E-29 T 14-10-2018 IPR029039 Flavoprotein-like superfamily DB29_01430 ef0539696519dcb83803dece74d63b42 181 Pfam PF03358 NADPH-dependent FMN reductase 3 142 4.5E-30 T 14-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 DB29_01430 ef0539696519dcb83803dece74d63b42 181 TIGRFAM TIGR03567 FMN_reduc_SsuE: FMN reductase 3 172 2.6E-68 T 14-10-2018 IPR020048 NADPH-dependent FMN reductase, SsuE GO:0008752|GO:0046306|GO:0055114 KEGG: 00740+1.5.1.38|MetaCyc: PWY-7723 DB29_01430 ef0539696519dcb83803dece74d63b42 181 Gene3D G3DSA:3.40.50.360 2 179 1.9E-42 T 14-10-2018 IPR029039 Flavoprotein-like superfamily DB29_03177 fd0151785b8d9353890ac00adf3936a7 534 Gene3D G3DSA:3.40.190.10 173 525 1.9E-129 T 14-10-2018 DB29_03177 fd0151785b8d9353890ac00adf3936a7 534 Gene3D G3DSA:3.40.190.10 71 432 1.9E-129 T 14-10-2018 DB29_03177 fd0151785b8d9353890ac00adf3936a7 534 Pfam PF13416 Bacterial extracellular solute-binding protein 69 281 7.1E-10 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein DB29_03177 fd0151785b8d9353890ac00adf3936a7 534 SUPERFAMILY SSF53850 17 527 7.14E-84 T 14-10-2018 DB29_02024 74b753f5db565cd8912f7a4d3fd7b879 534 PIRSF PIRSF002741 1 534 2.0E-120 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 DB29_02024 74b753f5db565cd8912f7a4d3fd7b879 534 Gene3D G3DSA:3.90.76.10 54 212 1.7E-145 T 14-10-2018 DB29_02024 74b753f5db565cd8912f7a4d3fd7b879 534 SUPERFAMILY SSF53850 42 533 2.95E-143 T 14-10-2018 DB29_02024 74b753f5db565cd8912f7a4d3fd7b879 534 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 87 451 5.2E-95 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain DB29_02024 74b753f5db565cd8912f7a4d3fd7b879 534 Gene3D G3DSA:3.40.190.10 213 516 1.7E-145 T 14-10-2018 DB29_02024 74b753f5db565cd8912f7a4d3fd7b879 534 Gene3D G3DSA:3.10.105.10 289 507 1.7E-145 T 14-10-2018 DB29_01398 0ccf82fc112c980e8007527aa769cb4d 352 SUPERFAMILY SSF51735 142 309 2.84E-35 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_01398 0ccf82fc112c980e8007527aa769cb4d 352 Gene3D G3DSA:3.40.50.720 156 291 6.5E-99 T 14-10-2018 DB29_01398 0ccf82fc112c980e8007527aa769cb4d 352 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 33 139 1.9E-35 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 DB29_01398 0ccf82fc112c980e8007527aa769cb4d 352 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 66 80 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 DB29_01398 0ccf82fc112c980e8007527aa769cb4d 352 SMART SM00829 17 343 1.6E-5 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 DB29_01398 0ccf82fc112c980e8007527aa769cb4d 352 Gene3D G3DSA:3.90.180.10 16 331 6.5E-99 T 14-10-2018 DB29_01398 0ccf82fc112c980e8007527aa769cb4d 352 Pfam PF00107 Zinc-binding dehydrogenase 179 304 3.5E-23 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 DB29_01398 0ccf82fc112c980e8007527aa769cb4d 352 SUPERFAMILY SSF50129 7 178 2.89E-53 T 14-10-2018 IPR011032 GroES-like superfamily DB29_02048 970effec35818e6d9bcab1647516805e 284 Pfam PF14175 YaaC-like Protein 2 280 3.5E-77 T 14-10-2018 IPR026988 YaaC-like protein DB29_00481 2a64e8fb39baca49f0bb77b84f336368 49 Pfam PF09501 Probable sporulation protein (Bac_small_yrzI) 1 48 9.5E-15 T 14-10-2018 IPR012655 Uncharacterised protein YrzI DB29_02197 3ff6736e2d9f4c230e8e5d31a026d490 610 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 119 228 2.5E-28 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DB29_02197 3ff6736e2d9f4c230e8e5d31a026d490 610 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 508 605 1.9E-12 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DB29_02197 3ff6736e2d9f4c230e8e5d31a026d490 610 SMART SM00388 4 72 1.7E-5 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DB29_02197 3ff6736e2d9f4c230e8e5d31a026d490 610 SUPERFAMILY SSF47384 2 72 4.32E-9 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DB29_02197 3ff6736e2d9f4c230e8e5d31a026d490 610 Gene3D G3DSA:3.30.565.10 473 608 1.6E-20 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB29_02197 3ff6736e2d9f4c230e8e5d31a026d490 610 SUPERFAMILY SSF55874 61 227 3.54E-43 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB29_02197 3ff6736e2d9f4c230e8e5d31a026d490 610 Gene3D G3DSA:3.40.50.12740 280 472 2.6E-40 T 14-10-2018 DB29_02197 3ff6736e2d9f4c230e8e5d31a026d490 610 PRINTS PR00344 Bacterial sensor protein C-terminal signature 172 182 2.0E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB29_02197 3ff6736e2d9f4c230e8e5d31a026d490 610 PRINTS PR00344 Bacterial sensor protein C-terminal signature 213 226 2.0E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB29_02197 3ff6736e2d9f4c230e8e5d31a026d490 610 PRINTS PR00344 Bacterial sensor protein C-terminal signature 189 207 2.0E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB29_02197 3ff6736e2d9f4c230e8e5d31a026d490 610 PRINTS PR00344 Bacterial sensor protein C-terminal signature 154 168 2.0E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB29_02197 3ff6736e2d9f4c230e8e5d31a026d490 610 Pfam PF00512 His Kinase A (phospho-acceptor) domain 5 72 2.2E-8 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DB29_02197 3ff6736e2d9f4c230e8e5d31a026d490 610 SUPERFAMILY SSF55874 467 602 6.42E-19 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB29_02197 3ff6736e2d9f4c230e8e5d31a026d490 610 Pfam PF00072 Response regulator receiver domain 283 395 4.9E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DB29_02197 3ff6736e2d9f4c230e8e5d31a026d490 610 SMART SM00448 281 394 1.4E-35 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DB29_02197 3ff6736e2d9f4c230e8e5d31a026d490 610 Gene3D G3DSA:1.10.287.130 1 73 5.4E-9 T 14-10-2018 DB29_02197 3ff6736e2d9f4c230e8e5d31a026d490 610 Gene3D G3DSA:3.30.565.10 74 232 7.9E-45 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB29_02197 3ff6736e2d9f4c230e8e5d31a026d490 610 SUPERFAMILY SSF52172 280 436 1.85E-37 T 14-10-2018 IPR011006 CheY-like superfamily DB29_02197 3ff6736e2d9f4c230e8e5d31a026d490 610 SMART SM00387 118 229 1.4E-36 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DB29_02197 3ff6736e2d9f4c230e8e5d31a026d490 610 SMART SM00387 503 607 1.2E-8 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DB29_02197 3ff6736e2d9f4c230e8e5d31a026d490 610 Pfam PF06580 Histidine kinase 411 490 7.0E-22 T 14-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 DB29_01034 22959af460ec26af7476cc5d67bacc88 129 Pfam PF03610 PTS system fructose IIA component 8 117 3.4E-19 T 14-10-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 DB29_01034 22959af460ec26af7476cc5d67bacc88 129 Gene3D G3DSA:3.40.50.510 2 129 5.7E-37 T 14-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 DB29_01034 22959af460ec26af7476cc5d67bacc88 129 SUPERFAMILY SSF53062 6 126 8.24E-28 T 14-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 DB29_01034 22959af460ec26af7476cc5d67bacc88 129 TIGRFAM TIGR02364 dha_pts: dihydroxyacetone kinase, phosphotransfer subunit 6 123 1.5E-33 T 14-10-2018 IPR012844 Dihydroxyacetone kinase phosphotransferase subunit, N-terminal domain DB29_02746 2c6c2d07579e3671cc8e5d41b13b98c6 400 SUPERFAMILY SSF51445 11 394 8.05E-98 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily DB29_02746 2c6c2d07579e3671cc8e5d41b13b98c6 400 Pfam PF07745 Glycosyl hydrolase family 53 41 393 2.3E-118 T 14-10-2018 IPR011683 Glycosyl hydrolase family 53 GO:0015926 DB29_02746 2c6c2d07579e3671cc8e5d41b13b98c6 400 Gene3D G3DSA:3.20.20.80 21 400 5.8E-146 T 14-10-2018 DB29_03640 3b60d76c90250ddc412dfe214fb7dfe7 293 Pfam PF04085 rod shape-determining protein MreC 123 275 1.4E-40 T 14-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 DB29_03640 3b60d76c90250ddc412dfe214fb7dfe7 293 PIRSF PIRSF038471 1 289 5.1E-64 T 14-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 DB29_03640 3b60d76c90250ddc412dfe214fb7dfe7 293 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 7 280 7.7E-57 T 14-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 DB29_03640 3b60d76c90250ddc412dfe214fb7dfe7 293 Gene3D G3DSA:2.40.10.340 120 272 1.6E-49 T 14-10-2018 DB29_03640 3b60d76c90250ddc412dfe214fb7dfe7 293 Gene3D G3DSA:2.40.10.350 175 265 1.6E-49 T 14-10-2018 DB29_01734 b211bd0d786cefe203988b148ff384a1 392 Gene3D G3DSA:3.40.50.1970 3 189 9.9E-52 T 14-10-2018 DB29_01734 b211bd0d786cefe203988b148ff384a1 392 Pfam PF00465 Iron-containing alcohol dehydrogenase 18 380 2.5E-121 T 14-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 DB29_01734 b211bd0d786cefe203988b148ff384a1 392 SUPERFAMILY SSF56796 11 391 2.22E-125 T 14-10-2018 DB29_01734 b211bd0d786cefe203988b148ff384a1 392 Gene3D G3DSA:1.20.1090.10 191 391 1.7E-71 T 14-10-2018 DB29_04137 00fcd996376e296f8107e6a7bb18846f 159 Gene3D G3DSA:2.60.40.1240 39 152 1.9E-19 T 14-10-2018 IPR029050 Immunoprotective extracellular, immunoglobulin-like domain superfamily DB29_04137 00fcd996376e296f8107e6a7bb18846f 159 Pfam PF11611 Domain of unknown function (DUF4352) 45 146 5.2E-17 T 14-10-2018 IPR029051 Domain of unknown function DUF4352 DB29_02787 5d4c480fab21a3c40ecdd8f97aa8b17e 342 Gene3D G3DSA:3.40.50.2300 162 293 1.6E-77 T 14-10-2018 DB29_02787 5d4c480fab21a3c40ecdd8f97aa8b17e 342 Gene3D G3DSA:1.10.260.40 3 61 4.7E-23 T 14-10-2018 DB29_02787 5d4c480fab21a3c40ecdd8f97aa8b17e 342 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 94 102 - T 14-10-2018 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 DB29_02787 5d4c480fab21a3c40ecdd8f97aa8b17e 342 Pfam PF00356 Bacterial regulatory proteins, lacI family 5 50 9.5E-17 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DB29_02787 5d4c480fab21a3c40ecdd8f97aa8b17e 342 ProSitePatterns PS00356 LacI-type HTH domain signature. 6 24 - T 14-10-2018 DB29_02787 5d4c480fab21a3c40ecdd8f97aa8b17e 342 SMART SM00354 3 73 3.2E-29 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DB29_02787 5d4c480fab21a3c40ecdd8f97aa8b17e 342 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 15 25 4.5E-7 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DB29_02787 5d4c480fab21a3c40ecdd8f97aa8b17e 342 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 5 15 4.5E-7 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DB29_02787 5d4c480fab21a3c40ecdd8f97aa8b17e 342 SUPERFAMILY SSF47413 2 61 1.3E-17 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DB29_02787 5d4c480fab21a3c40ecdd8f97aa8b17e 342 Gene3D G3DSA:3.40.50.2300 63 309 1.6E-77 T 14-10-2018 DB29_02787 5d4c480fab21a3c40ecdd8f97aa8b17e 342 Pfam PF13377 Periplasmic binding protein-like domain 171 332 2.6E-35 T 14-10-2018 DB29_02787 5d4c480fab21a3c40ecdd8f97aa8b17e 342 SUPERFAMILY SSF53822 63 335 3.99E-75 T 14-10-2018 IPR028082 Periplasmic binding protein-like I DB29_03277 b73ec6b0acca60a8cfb668b390d950cb 335 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 150 157 - T 14-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DB29_03277 b73ec6b0acca60a8cfb668b390d950cb 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 173 189 6.9E-42 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DB29_03277 b73ec6b0acca60a8cfb668b390d950cb 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 146 164 6.9E-42 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DB29_03277 b73ec6b0acca60a8cfb668b390d950cb 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 229 246 6.9E-42 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DB29_03277 b73ec6b0acca60a8cfb668b390d950cb 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 269 284 6.9E-42 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DB29_03277 b73ec6b0acca60a8cfb668b390d950cb 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 109 122 6.9E-42 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DB29_03277 b73ec6b0acca60a8cfb668b390d950cb 335 SUPERFAMILY SSF51735 4 168 1.42E-67 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_03277 b73ec6b0acca60a8cfb668b390d950cb 335 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 157 313 8.9E-73 T 14-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DB29_03277 b73ec6b0acca60a8cfb668b390d950cb 335 Gene3D G3DSA:3.30.360.10 151 315 7.4E-162 T 14-10-2018 DB29_03277 b73ec6b0acca60a8cfb668b390d950cb 335 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 4 102 3.1E-40 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DB29_03277 b73ec6b0acca60a8cfb668b390d950cb 335 PIRSF PIRSF000149 1 334 4.0E-142 T 14-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DB29_03277 b73ec6b0acca60a8cfb668b390d950cb 335 Gene3D G3DSA:3.40.50.720 4 329 7.4E-162 T 14-10-2018 DB29_03277 b73ec6b0acca60a8cfb668b390d950cb 335 SUPERFAMILY SSF55347 152 314 1.46E-75 T 14-10-2018 DB29_03277 b73ec6b0acca60a8cfb668b390d950cb 335 SMART SM00846 3 152 4.7E-98 T 14-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 DB29_03277 b73ec6b0acca60a8cfb668b390d950cb 335 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 325 1.4E-141 T 14-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DB29_02256 2bdaa8f312545b83a5ff4a24238c39a6 235 SUPERFAMILY SSF56037 53 221 4.71E-33 T 14-10-2018 DB29_02256 2bdaa8f312545b83a5ff4a24238c39a6 235 Pfam PF03483 B3/4 domain 65 195 1.1E-22 T 14-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 DB29_02256 2bdaa8f312545b83a5ff4a24238c39a6 235 SMART SM00873 63 216 6.7E-13 T 14-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 DB29_02256 2bdaa8f312545b83a5ff4a24238c39a6 235 Gene3D G3DSA:3.50.40.10 66 218 1.9E-8 T 14-10-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 KEGG: 00970+6.1.1.20 DB29_00130 8257a406b7c24ed303690c37f3acd30a 395 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 16 377 1.7E-125 T 14-10-2018 IPR017439 Amidohydrolase GO:0016787 DB29_00130 8257a406b7c24ed303690c37f3acd30a 395 SUPERFAMILY SSF55031 185 298 6.41E-30 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain DB29_00130 8257a406b7c24ed303690c37f3acd30a 395 Gene3D G3DSA:3.30.70.360 183 297 7.2E-147 T 14-10-2018 DB29_00130 8257a406b7c24ed303690c37f3acd30a 395 Pfam PF01546 Peptidase family M20/M25/M40 74 378 1.4E-34 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 DB29_00130 8257a406b7c24ed303690c37f3acd30a 395 PIRSF PIRSF005962 1 393 9.1E-132 T 14-10-2018 IPR017439 Amidohydrolase GO:0016787 DB29_00130 8257a406b7c24ed303690c37f3acd30a 395 Pfam PF07687 Peptidase dimerisation domain 187 282 3.0E-9 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain DB29_00130 8257a406b7c24ed303690c37f3acd30a 395 Gene3D G3DSA:3.40.630.10 16 374 7.2E-147 T 14-10-2018 DB29_00130 8257a406b7c24ed303690c37f3acd30a 395 SUPERFAMILY SSF53187 3 389 2.42E-91 T 14-10-2018 DB29_02791 6f95b94ad14b8b743beb433a836ab932 120 Pfam PF12680 SnoaL-like domain 15 111 1.1E-14 T 14-10-2018 IPR037401 SnoaL-like domain DB29_02791 6f95b94ad14b8b743beb433a836ab932 120 Gene3D G3DSA:3.10.450.50 11 117 2.1E-27 T 14-10-2018 DB29_02791 6f95b94ad14b8b743beb433a836ab932 120 SUPERFAMILY SSF54427 9 117 3.6E-20 T 14-10-2018 IPR032710 NTF2-like domain superfamily DB29_03664 941fe76897b7d7c06d1f76f9630c7f74 311 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 109 308 1.8E-26 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DB29_03664 941fe76897b7d7c06d1f76f9630c7f74 311 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 25 308 2.9E-88 T 14-10-2018 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 DB29_03664 941fe76897b7d7c06d1f76f9630c7f74 311 Gene3D G3DSA:1.10.3720.10 86 309 2.4E-35 T 14-10-2018 IPR035906 MetI-like superfamily DB29_03664 941fe76897b7d7c06d1f76f9630c7f74 311 SUPERFAMILY SSF161098 24 304 1.4E-38 T 14-10-2018 IPR035906 MetI-like superfamily DB29_01946 6ff80f8f6ce6c1e1ed177d9384067878 662 ProSitePatterns PS00674 AAA-protein family signature. 304 322 - T 14-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 DB29_01946 6ff80f8f6ce6c1e1ed177d9384067878 662 Gene3D G3DSA:3.40.50.300 151 334 9.8E-71 T 14-10-2018 DB29_01946 6ff80f8f6ce6c1e1ed177d9384067878 662 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 109 605 4.3E-242 T 14-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 DB29_01946 6ff80f8f6ce6c1e1ed177d9384067878 662 SUPERFAMILY SSF52540 157 405 3.87E-74 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_01946 6ff80f8f6ce6c1e1ed177d9384067878 662 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 3 614 38.521 T 14-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 DB29_01946 6ff80f8f6ce6c1e1ed177d9384067878 662 Pfam PF01434 Peptidase family M41 395 604 2.1E-86 T 14-10-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 DB29_01946 6ff80f8f6ce6c1e1ed177d9384067878 662 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 201 332 5.4E-46 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 DB29_01946 6ff80f8f6ce6c1e1ed177d9384067878 662 Gene3D G3DSA:1.20.58.760 410 616 1.3E-73 T 14-10-2018 DB29_01946 6ff80f8f6ce6c1e1ed177d9384067878 662 SMART SM00382 197 336 2.3E-26 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_01946 6ff80f8f6ce6c1e1ed177d9384067878 662 Pfam PF06480 FtsH Extracellular 10 83 1.2E-7 T 14-10-2018 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 Reactome: R-HSA-8949664 DB29_01946 6ff80f8f6ce6c1e1ed177d9384067878 662 Gene3D G3DSA:1.10.8.60 335 409 2.3E-30 T 14-10-2018 DB29_01946 6ff80f8f6ce6c1e1ed177d9384067878 662 SUPERFAMILY SSF140990 415 612 1.96E-72 T 14-10-2018 IPR037219 Peptidase M41-like GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 DB29_02067 1fcc29ab6bc1ef89bdadf593011e77fa 237 PIRSF PIRSF003078 3 219 1.4E-52 T 14-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 DB29_02067 1fcc29ab6bc1ef89bdadf593011e77fa 237 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 14 213 27.247 T 14-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 DB29_02067 1fcc29ab6bc1ef89bdadf593011e77fa 237 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 25 215 1.8E-49 T 14-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 DB29_02067 1fcc29ab6bc1ef89bdadf593011e77fa 237 Pfam PF02527 rRNA small subunit methyltransferase G 21 203 1.2E-52 T 14-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 DB29_02067 1fcc29ab6bc1ef89bdadf593011e77fa 237 SUPERFAMILY SSF53335 4 236 8.72E-41 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DB29_02067 1fcc29ab6bc1ef89bdadf593011e77fa 237 Gene3D G3DSA:3.40.50.150 2 237 6.3E-79 T 14-10-2018 DB29_00499 c6096b2659067c62926a19948f315695 50 Pfam PF14147 Sporulation protein YhaL 2 45 3.6E-23 T 14-10-2018 IPR025428 Sporulation protein YhaL DB29_03562 eec6a882ba28c3c4732d93d8f0e73e06 67 Pfam PF01632 Ribosomal protein L35 2 62 1.6E-25 T 14-10-2018 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB29_03562 eec6a882ba28c3c4732d93d8f0e73e06 67 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 64 9.4E-28 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 DB29_03562 eec6a882ba28c3c4732d93d8f0e73e06 67 PRINTS PR00064 Ribosomal protein L35 signature 36 54 1.6E-21 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 DB29_03562 eec6a882ba28c3c4732d93d8f0e73e06 67 PRINTS PR00064 Ribosomal protein L35 signature 21 35 1.6E-21 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 DB29_03562 eec6a882ba28c3c4732d93d8f0e73e06 67 PRINTS PR00064 Ribosomal protein L35 signature 3 20 1.6E-21 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 DB29_03562 eec6a882ba28c3c4732d93d8f0e73e06 67 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 64 19.509 T 14-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 DB29_03562 eec6a882ba28c3c4732d93d8f0e73e06 67 SUPERFAMILY SSF143034 2 64 1.14E-22 T 14-10-2018 IPR037229 Ribosomal protein L35 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB29_03562 eec6a882ba28c3c4732d93d8f0e73e06 67 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 31 - T 14-10-2018 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 DB29_03562 eec6a882ba28c3c4732d93d8f0e73e06 67 Gene3D G3DSA:2.40.50.530 1 65 6.3E-22 T 14-10-2018 DB29_02460 4a9fbc393c75268bd5e3c5b4abaca6db 326 Gene3D G3DSA:3.40.190.10 40 323 5.9E-61 T 14-10-2018 DB29_02460 4a9fbc393c75268bd5e3c5b4abaca6db 326 Gene3D G3DSA:3.40.190.10 117 211 5.9E-61 T 14-10-2018 DB29_02460 4a9fbc393c75268bd5e3c5b4abaca6db 326 Pfam PF09084 NMT1/THI5 like 47 250 9.3E-38 T 14-10-2018 IPR015168 SsuA/THI5-like DB29_02460 4a9fbc393c75268bd5e3c5b4abaca6db 326 SUPERFAMILY SSF53850 33 257 3.53E-24 T 14-10-2018 DB29_00528 894d747c100e2e2b989042b2fe14267a 232 Gene3D G3DSA:2.40.50.580 3 80 1.7E-18 T 14-10-2018 DB29_00528 894d747c100e2e2b989042b2fe14267a 232 TIGRFAM TIGR00230 sfsA: sugar fermentation stimulation protein 2 232 2.4E-52 T 14-10-2018 IPR005224 Sugar fermentation stimulation protein DB29_00528 894d747c100e2e2b989042b2fe14267a 232 Gene3D G3DSA:3.40.1350.60 81 232 5.4E-45 T 14-10-2018 DB29_00528 894d747c100e2e2b989042b2fe14267a 232 Hamap MF_00095 Sugar fermentation stimulation protein A [sfsA]. 1 232 47.213 T 14-10-2018 IPR005224 Sugar fermentation stimulation protein DB29_00528 894d747c100e2e2b989042b2fe14267a 232 Pfam PF03749 Sugar fermentation stimulation protein 12 222 7.3E-55 T 14-10-2018 IPR005224 Sugar fermentation stimulation protein DB29_01978 d5d6a2cb821a51a48d5e88d5cf968824 277 SUPERFAMILY SSF53271 97 257 3.15E-37 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like DB29_01978 d5d6a2cb821a51a48d5e88d5cf968824 277 Gene3D G3DSA:3.40.50.2020 75 275 4.2E-56 T 14-10-2018 DB29_01978 d5d6a2cb821a51a48d5e88d5cf968824 277 TIGRFAM TIGR01743 purR_Bsub: pur operon repressor PurR 4 271 5.1E-118 T 14-10-2018 IPR010078 Pur operon repressor GO:0003677|GO:0045892|GO:0045982 DB29_01978 d5d6a2cb821a51a48d5e88d5cf968824 277 Pfam PF00156 Phosphoribosyl transferase domain 110 247 2.3E-20 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 DB29_01978 d5d6a2cb821a51a48d5e88d5cf968824 277 SUPERFAMILY SSF46785 3 74 8.16E-26 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_01978 d5d6a2cb821a51a48d5e88d5cf968824 277 Gene3D G3DSA:1.10.10.10 2 74 5.5E-30 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_01978 d5d6a2cb821a51a48d5e88d5cf968824 277 Pfam PF09182 Bacterial purine repressor, N-terminal 5 74 1.2E-30 T 14-10-2018 IPR015265 Bacterial purine repressor, N-terminal GO:0003677|GO:0006355 DB29_01978 d5d6a2cb821a51a48d5e88d5cf968824 277 ProDom PD029816 REPRESSOR OPERON PUR TRANSCRIPTION PURINE TRANSCRIPTIONAL PURR REGULATION DNA-BINDING GLYCOSYLTRANSFERASE 10 75 1.0E-32 T 14-10-2018 IPR015265 Bacterial purine repressor, N-terminal GO:0003677|GO:0006355 DB29_03618 c045b719c782b90bfd958e6adf71489e 555 SUPERFAMILY SSF54211 352 533 5.31E-42 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DB29_03618 c045b719c782b90bfd958e6adf71489e 555 Gene3D G3DSA:3.40.50.300 52 263 4.2E-34 T 14-10-2018 DB29_03618 c045b719c782b90bfd958e6adf71489e 555 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 97 116 5.5E-34 T 14-10-2018 DB29_03618 c045b719c782b90bfd958e6adf71489e 555 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 469 488 5.5E-34 T 14-10-2018 DB29_03618 c045b719c782b90bfd958e6adf71489e 555 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 492 510 5.5E-34 T 14-10-2018 DB29_03618 c045b719c782b90bfd958e6adf71489e 555 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 352 368 5.5E-34 T 14-10-2018 DB29_03618 c045b719c782b90bfd958e6adf71489e 555 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 439 458 5.5E-34 T 14-10-2018 DB29_03618 c045b719c782b90bfd958e6adf71489e 555 TIGRFAM TIGR02902 spore_lonB: ATP-dependent protease LonB 6 532 3.0E-258 T 14-10-2018 IPR014251 Sporulation protease LonB DB29_03618 c045b719c782b90bfd958e6adf71489e 555 SMART SM00382 89 267 6.0E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_03618 c045b719c782b90bfd958e6adf71489e 555 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 93 264 2.4E-17 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 DB29_03618 c045b719c782b90bfd958e6adf71489e 555 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 173 188 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 DB29_03618 c045b719c782b90bfd958e6adf71489e 555 SUPERFAMILY SSF52540 55 328 1.24E-46 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_03618 c045b719c782b90bfd958e6adf71489e 555 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 442 450 - T 14-10-2018 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 DB29_03618 c045b719c782b90bfd958e6adf71489e 555 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 345 534 4.0E-36 T 14-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 DB29_03618 c045b719c782b90bfd958e6adf71489e 555 Gene3D G3DSA:3.30.230.10 345 547 1.6E-48 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DB29_02168 e3ba7c86534e87461ffcc7734ba89b12 227 SUPERFAMILY SSF158560 6 100 2.75E-21 T 14-10-2018 DB29_02168 e3ba7c86534e87461ffcc7734ba89b12 227 Pfam PF06570 Protein of unknown function (DUF1129) 44 220 1.6E-15 T 14-10-2018 IPR009214 Protein of unknown function DUF1129 DB29_01970 cf511072a5810d556d3ec11eccab144d 75 Pfam PF10955 Protein of unknown function (DUF2757) 1 75 5.7E-30 T 14-10-2018 IPR020115 Anti-sigma-F factor Fin GO:0010468 DB29_01970 cf511072a5810d556d3ec11eccab144d 75 ProDom PD057826 YABK 1 74 2.0E-38 T 14-10-2018 IPR020115 Anti-sigma-F factor Fin GO:0010468 DB29_02383 f1ffc69487aa479709222319016430bc 156 Gene3D G3DSA:3.40.140.10 1 156 3.8E-60 T 14-10-2018 DB29_02383 f1ffc69487aa479709222319016430bc 156 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 53 90 - T 14-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 DB29_02383 f1ffc69487aa479709222319016430bc 156 SUPERFAMILY SSF53927 2 138 1.67E-43 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 DB29_02383 f1ffc69487aa479709222319016430bc 156 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 3 101 5.6E-24 T 14-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain DB29_01221 fec75735d9332d2a45464c42cfaa6f1e 332 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 229 296 3.1E-17 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DB29_01221 fec75735d9332d2a45464c42cfaa6f1e 332 SMART SM00382 35 227 3.0E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_01221 fec75735d9332d2a45464c42cfaa6f1e 332 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB29_01221 fec75735d9332d2a45464c42cfaa6f1e 332 SUPERFAMILY SSF52540 5 248 2.42E-73 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_01221 fec75735d9332d2a45464c42cfaa6f1e 332 Gene3D G3DSA:3.40.50.300 3 331 3.6E-102 T 14-10-2018 DB29_01221 fec75735d9332d2a45464c42cfaa6f1e 332 Pfam PF00005 ABC transporter 27 177 3.8E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB29_01221 fec75735d9332d2a45464c42cfaa6f1e 332 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 227 316 4.5E-27 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DB29_01130 319fdeb37d8769b51ca355cd0a172697 637 SUPERFAMILY SSF52540 5 247 6.05E-49 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_01130 319fdeb37d8769b51ca355cd0a172697 637 ProSitePatterns PS00211 ABC transporters family signature. 446 460 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB29_01130 319fdeb37d8769b51ca355cd0a172697 637 ProSitePatterns PS00211 ABC transporters family signature. 166 180 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB29_01130 319fdeb37d8769b51ca355cd0a172697 637 Pfam PF00005 ABC transporter 346 474 2.8E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB29_01130 319fdeb37d8769b51ca355cd0a172697 637 Pfam PF12848 ABC transporter 233 313 3.4E-27 T 14-10-2018 IPR032781 ABC-transporter extension domain DB29_01130 319fdeb37d8769b51ca355cd0a172697 637 SMART SM00382 353 519 3.5E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_01130 319fdeb37d8769b51ca355cd0a172697 637 SMART SM00382 28 241 9.3E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_01130 319fdeb37d8769b51ca355cd0a172697 637 Gene3D G3DSA:1.10.287.380 564 637 2.3E-9 T 14-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 DB29_01130 319fdeb37d8769b51ca355cd0a172697 637 Gene3D G3DSA:3.40.50.300 1 288 1.0E-71 T 14-10-2018 DB29_01130 319fdeb37d8769b51ca355cd0a172697 637 SUPERFAMILY SSF52540 312 535 8.77E-51 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_01130 319fdeb37d8769b51ca355cd0a172697 637 Gene3D G3DSA:3.40.50.300 291 555 3.1E-67 T 14-10-2018 DB29_01130 319fdeb37d8769b51ca355cd0a172697 637 Pfam PF16326 ABC transporter C-terminal domain 571 636 6.9E-16 T 14-10-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 DB29_01130 319fdeb37d8769b51ca355cd0a172697 637 Pfam PF00005 ABC transporter 19 194 1.3E-27 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB29_03211 1a4edc4486891ba65b843f82ffd249dd 374 SMART SM00487 37 220 2.1E-18 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DB29_03211 1a4edc4486891ba65b843f82ffd249dd 374 SMART SM00490 259 340 3.4E-5 T 14-10-2018 IPR001650 Helicase, C-terminal DB29_03211 1a4edc4486891ba65b843f82ffd249dd 374 SUPERFAMILY SSF52540 62 348 7.45E-33 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_03211 1a4edc4486891ba65b843f82ffd249dd 374 Gene3D G3DSA:3.40.50.300 41 208 3.0E-18 T 14-10-2018 DB29_03211 1a4edc4486891ba65b843f82ffd249dd 374 Pfam PF00270 DEAD/DEAH box helicase 61 190 6.9E-8 T 14-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 DB29_03211 1a4edc4486891ba65b843f82ffd249dd 374 Gene3D G3DSA:3.40.50.300 218 354 4.2E-22 T 14-10-2018 DB29_03211 1a4edc4486891ba65b843f82ffd249dd 374 Pfam PF00271 Helicase conserved C-terminal domain 241 339 5.4E-10 T 14-10-2018 IPR001650 Helicase, C-terminal DB29_04173 1c91915e342519a4b83c69c0b2126942 362 SUPERFAMILY SSF53335 132 341 9.73E-31 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DB29_04173 1c91915e342519a4b83c69c0b2126942 362 Pfam PF13649 Methyltransferase domain 195 288 9.5E-11 T 14-10-2018 DB29_04173 1c91915e342519a4b83c69c0b2126942 362 Gene3D G3DSA:3.40.50.150 142 347 3.3E-26 T 14-10-2018 DB29_04173 1c91915e342519a4b83c69c0b2126942 362 SUPERFAMILY SSF46785 45 124 1.63E-5 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_00558 7ae5bd331e53316601e39e8b6d177f68 614 Pfam PF00912 Transglycosylase 60 236 1.6E-65 T 14-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DB29_00558 7ae5bd331e53316601e39e8b6d177f68 614 Pfam PF00905 Penicillin binding protein transpeptidase domain 335 574 1.8E-21 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 DB29_00558 7ae5bd331e53316601e39e8b6d177f68 614 SUPERFAMILY SSF53955 49 264 4.5E-74 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily DB29_00558 7ae5bd331e53316601e39e8b6d177f68 614 Gene3D G3DSA:1.10.3810.10 53 253 1.9E-76 T 14-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DB29_00558 7ae5bd331e53316601e39e8b6d177f68 614 Gene3D G3DSA:3.40.710.10 282 614 4.9E-76 T 14-10-2018 DB29_00558 7ae5bd331e53316601e39e8b6d177f68 614 SUPERFAMILY SSF56601 225 609 1.33E-75 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like DB29_01081 3aca2eca39e94099a8b95201189eaff9 236 PIRSF PIRSF006171 1 228 2.6E-75 T 14-10-2018 IPR024187 Signal transduction response regulator, citrate/malate metabolism GO:0000160|GO:0003700 DB29_01081 3aca2eca39e94099a8b95201189eaff9 236 SMART SM00448 2 116 3.0E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DB29_01081 3aca2eca39e94099a8b95201189eaff9 236 Pfam PF00072 Response regulator receiver domain 4 116 1.7E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DB29_01081 3aca2eca39e94099a8b95201189eaff9 236 SUPERFAMILY SSF52172 1 171 3.7E-34 T 14-10-2018 IPR011006 CheY-like superfamily DB29_01081 3aca2eca39e94099a8b95201189eaff9 236 Gene3D G3DSA:3.40.50.12740 2 205 5.5E-32 T 14-10-2018 DB29_00920 94198153246199910ee1c831a7a7f40e 293 Gene3D G3DSA:2.70.98.10 1 293 4.9E-92 T 14-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 DB29_00920 94198153246199910ee1c831a7a7f40e 293 SUPERFAMILY SSF74650 1 292 1.31E-49 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 DB29_00920 94198153246199910ee1c831a7a7f40e 293 Pfam PF01263 Aldose 1-epimerase 3 203 2.8E-27 T 14-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 DB29_03090 69b2183ecc31edaaa3006e4750744cae 76 TIGRFAM TIGR03090 SASP_tlp: small, acid-soluble spore protein tlp 2 72 7.9E-31 T 14-10-2018 IPR017524 Small acid-soluble spore protein, thioredoxin-like DB29_03090 69b2183ecc31edaaa3006e4750744cae 76 Hamap MF_01506 Small, acid-soluble spore protein Tlp [tlp]. 1 76 25.388 T 14-10-2018 IPR017524 Small acid-soluble spore protein, thioredoxin-like DB29_02480 cc98565fe292f17e74e2ae38f1205d69 401 Pfam PF02230 Phospholipase/Carboxylesterase 279 370 4.1E-7 T 14-10-2018 IPR003140 Phospholipase/carboxylesterase/thioesterase GO:0016787 DB29_02480 cc98565fe292f17e74e2ae38f1205d69 401 Gene3D G3DSA:2.60.40.2180 30 167 1.5E-33 T 14-10-2018 DB29_02480 cc98565fe292f17e74e2ae38f1205d69 401 SUPERFAMILY SSF53474 184 381 4.63E-32 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DB29_02480 cc98565fe292f17e74e2ae38f1205d69 401 Gene3D G3DSA:3.40.50.1820 172 399 4.4E-67 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DB29_02231 f3153aabea64c3bd2e0db70b57bc0758 318 Pfam PF01297 Zinc-uptake complex component A periplasmic 41 309 4.3E-68 T 14-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 DB29_02231 f3153aabea64c3bd2e0db70b57bc0758 318 Gene3D G3DSA:3.40.50.1980 34 179 1.2E-41 T 14-10-2018 DB29_02231 f3153aabea64c3bd2e0db70b57bc0758 318 PRINTS PR00690 Adhesin family signature 193 214 2.9E-37 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 DB29_02231 f3153aabea64c3bd2e0db70b57bc0758 318 PRINTS PR00690 Adhesin family signature 246 264 2.9E-37 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 DB29_02231 f3153aabea64c3bd2e0db70b57bc0758 318 PRINTS PR00690 Adhesin family signature 82 99 2.9E-37 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 DB29_02231 f3153aabea64c3bd2e0db70b57bc0758 318 PRINTS PR00690 Adhesin family signature 38 56 2.9E-37 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 DB29_02231 f3153aabea64c3bd2e0db70b57bc0758 318 PRINTS PR00690 Adhesin family signature 277 296 2.9E-37 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 DB29_02231 f3153aabea64c3bd2e0db70b57bc0758 318 PRINTS PR00690 Adhesin family signature 69 82 2.9E-37 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 DB29_02231 f3153aabea64c3bd2e0db70b57bc0758 318 PRINTS PR00691 Adhesin B signature 82 101 1.0E-21 T 14-10-2018 IPR006129 Adhesin B GO:0007155 DB29_02231 f3153aabea64c3bd2e0db70b57bc0758 318 PRINTS PR00691 Adhesin B signature 193 210 1.0E-21 T 14-10-2018 IPR006129 Adhesin B GO:0007155 DB29_02231 f3153aabea64c3bd2e0db70b57bc0758 318 PRINTS PR00691 Adhesin B signature 38 59 1.0E-21 T 14-10-2018 IPR006129 Adhesin B GO:0007155 DB29_02231 f3153aabea64c3bd2e0db70b57bc0758 318 PRINTS PR00691 Adhesin B signature 242 259 1.0E-21 T 14-10-2018 IPR006129 Adhesin B GO:0007155 DB29_02231 f3153aabea64c3bd2e0db70b57bc0758 318 PRINTS PR00691 Adhesin B signature 63 81 1.0E-21 T 14-10-2018 IPR006129 Adhesin B GO:0007155 DB29_02231 f3153aabea64c3bd2e0db70b57bc0758 318 Gene3D G3DSA:3.40.50.1980 183 312 6.9E-45 T 14-10-2018 DB29_02231 f3153aabea64c3bd2e0db70b57bc0758 318 SUPERFAMILY SSF53807 37 311 8.34E-76 T 14-10-2018 DB29_03571 185190496e7038a9c520d0a9c9347a96 246 SUPERFAMILY SSF55315 2 93 2.59E-26 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like DB29_03571 185190496e7038a9c520d0a9c9347a96 246 Gene3D G3DSA:3.30.1330.30 2 93 4.9E-25 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like DB29_03571 185190496e7038a9c520d0a9c9347a96 246 Pfam PF00588 SpoU rRNA Methylase family 104 242 1.1E-34 T 14-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 DB29_03571 185190496e7038a9c520d0a9c9347a96 246 Gene3D G3DSA:3.40.1280.10 94 246 4.8E-48 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal DB29_03571 185190496e7038a9c520d0a9c9347a96 246 SMART SM00967 31 95 2.7E-13 T 14-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 DB29_03571 185190496e7038a9c520d0a9c9347a96 246 SUPERFAMILY SSF75217 83 244 1.18E-39 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases DB29_03571 185190496e7038a9c520d0a9c9347a96 246 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 31 93 8.5E-8 T 14-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 DB29_01941 ca0b7a0e1b601cca1e83b8003cc85450 197 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 186 1.5E-86 T 14-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 DB29_01941 ca0b7a0e1b601cca1e83b8003cc85450 197 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 44 58 7.3E-8 T 14-10-2018 DB29_01941 ca0b7a0e1b601cca1e83b8003cc85450 197 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 74 90 7.3E-8 T 14-10-2018 DB29_01941 ca0b7a0e1b601cca1e83b8003cc85450 197 SUPERFAMILY SSF52317 1 188 2.65E-56 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like DB29_01941 ca0b7a0e1b601cca1e83b8003cc85450 197 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 9.7E-14 T 14-10-2018 DB29_01941 ca0b7a0e1b601cca1e83b8003cc85450 197 PRINTS PR00096 Glutamine amidotransferase superfamily signature 164 177 9.7E-14 T 14-10-2018 DB29_01941 ca0b7a0e1b601cca1e83b8003cc85450 197 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 9.7E-14 T 14-10-2018 DB29_01941 ca0b7a0e1b601cca1e83b8003cc85450 197 Pfam PF00117 Glutamine amidotransferase class-I 4 185 2.4E-56 T 14-10-2018 IPR017926 Glutamine amidotransferase DB29_01941 ca0b7a0e1b601cca1e83b8003cc85450 197 Gene3D G3DSA:3.40.50.880 1 189 2.1E-63 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like DB29_01941 ca0b7a0e1b601cca1e83b8003cc85450 197 PRINTS PR00097 Anthranilate synthase component II signature 164 177 1.3E-36 T 14-10-2018 DB29_01941 ca0b7a0e1b601cca1e83b8003cc85450 197 PRINTS PR00097 Anthranilate synthase component II signature 99 107 1.3E-36 T 14-10-2018 DB29_01941 ca0b7a0e1b601cca1e83b8003cc85450 197 PRINTS PR00097 Anthranilate synthase component II signature 2 16 1.3E-36 T 14-10-2018 DB29_01941 ca0b7a0e1b601cca1e83b8003cc85450 197 PRINTS PR00097 Anthranilate synthase component II signature 47 56 1.3E-36 T 14-10-2018 DB29_01941 ca0b7a0e1b601cca1e83b8003cc85450 197 PRINTS PR00097 Anthranilate synthase component II signature 119 131 1.3E-36 T 14-10-2018 DB29_01941 ca0b7a0e1b601cca1e83b8003cc85450 197 PRINTS PR00097 Anthranilate synthase component II signature 74 85 1.3E-36 T 14-10-2018 DB29_02477 1db8d346edd02a28e402ababbaa36380 124 Pfam PF10710 Protein of unknown function (DUF2512) 1 112 6.7E-31 T 14-10-2018 IPR019649 Protein of unknown function DUF2512 DB29_00941 40281bc305cd97a7efcad07ff3cd89a2 210 SUPERFAMILY SSF52172 3 118 8.11E-36 T 14-10-2018 IPR011006 CheY-like superfamily DB29_00941 40281bc305cd97a7efcad07ff3cd89a2 210 SMART SM00448 2 114 1.3E-32 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DB29_00941 40281bc305cd97a7efcad07ff3cd89a2 210 Pfam PF00196 Bacterial regulatory proteins, luxR family 150 205 1.9E-14 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DB29_00941 40281bc305cd97a7efcad07ff3cd89a2 210 SMART SM00421 148 205 3.7E-22 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DB29_00941 40281bc305cd97a7efcad07ff3cd89a2 210 Pfam PF00072 Response regulator receiver domain 4 114 1.7E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DB29_00941 40281bc305cd97a7efcad07ff3cd89a2 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 181 193 2.3E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DB29_00941 40281bc305cd97a7efcad07ff3cd89a2 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 165 181 2.3E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DB29_00941 40281bc305cd97a7efcad07ff3cd89a2 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 151 165 2.3E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DB29_00941 40281bc305cd97a7efcad07ff3cd89a2 210 SUPERFAMILY SSF46894 141 209 2.07E-19 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DB29_00941 40281bc305cd97a7efcad07ff3cd89a2 210 Gene3D G3DSA:3.40.50.12740 3 210 1.7E-65 T 14-10-2018 DB29_02369 ad166172f68eedcc62cfa5604611805f 886 SUPERFAMILY SSF58104 200 388 2.88E-5 T 14-10-2018 DB29_02369 ad166172f68eedcc62cfa5604611805f 886 TIGRFAM TIGR03062 pip_yhgE_Cterm: YhgE/Pip C-terminal domain 664 865 5.0E-54 T 14-10-2018 IPR017501 Phage infection protein, YhgE, C-terminal DB29_02369 ad166172f68eedcc62cfa5604611805f 886 Pfam PF12051 Protein of unknown function (DUF3533) 39 136 3.3E-9 T 14-10-2018 IPR022703 Domain of unknown function DUF3533 DB29_02369 ad166172f68eedcc62cfa5604611805f 886 TIGRFAM TIGR03061 pip_yhgE_Nterm: YhgE/Pip N-terminal domain 11 173 1.9E-48 T 14-10-2018 IPR017500 Phage infection protein, YhgE, N-terminal DB29_02369 ad166172f68eedcc62cfa5604611805f 886 Pfam PF12698 ABC-2 family transporter protein 719 862 1.4E-9 T 14-10-2018 DB29_02369 ad166172f68eedcc62cfa5604611805f 886 Gene3D G3DSA:1.20.120.20 504 624 9.7E-6 T 14-10-2018 DB29_00250 3a14f904f7020f20acf56686d8158136 327 Gene3D G3DSA:1.20.120.940 142 313 3.2E-48 T 14-10-2018 IPR038323 Putative aromatic acid exporter, C-terminal domain superfamily DB29_00250 3a14f904f7020f20acf56686d8158136 327 Pfam PF06081 Aromatic acid exporter family member 1 3 143 7.9E-51 T 14-10-2018 IPR010343 Aromatic acid exporter family member 1 DB29_00250 3a14f904f7020f20acf56686d8158136 327 Pfam PF11728 Putative aromatic acid exporter C-terminal domain 148 310 2.3E-52 T 14-10-2018 IPR021062 Putative aromatic acid exporter, C-terminal DB29_00790 8d0f2a7906822133a15fd8d82e4094fc 72 Pfam PF13930 DNA/RNA non-specific endonuclease 1 52 4.2E-15 T 14-10-2018 DB29_01764 ec75c8a6336e5e66e101b592514acf87 324 ProSitePatterns PS00356 LacI-type HTH domain signature. 5 23 - T 14-10-2018 DB29_01764 ec75c8a6336e5e66e101b592514acf87 324 SUPERFAMILY SSF47413 2 61 1.52E-17 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DB29_01764 ec75c8a6336e5e66e101b592514acf87 324 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 14 24 7.7E-5 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DB29_01764 ec75c8a6336e5e66e101b592514acf87 324 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 4 14 7.7E-5 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DB29_01764 ec75c8a6336e5e66e101b592514acf87 324 Pfam PF13377 Periplasmic binding protein-like domain 161 320 3.0E-31 T 14-10-2018 DB29_01764 ec75c8a6336e5e66e101b592514acf87 324 SMART SM00354 2 72 1.3E-21 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DB29_01764 ec75c8a6336e5e66e101b592514acf87 324 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 49 1.4E-14 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DB29_01764 ec75c8a6336e5e66e101b592514acf87 324 SUPERFAMILY SSF53822 59 314 2.16E-48 T 14-10-2018 IPR028082 Periplasmic binding protein-like I DB29_01764 ec75c8a6336e5e66e101b592514acf87 324 Gene3D G3DSA:3.40.50.2300 153 281 9.3E-48 T 14-10-2018 DB29_01764 ec75c8a6336e5e66e101b592514acf87 324 Gene3D G3DSA:1.10.260.40 1 56 1.8E-21 T 14-10-2018 DB29_01764 ec75c8a6336e5e66e101b592514acf87 324 Gene3D G3DSA:3.40.50.2300 57 298 9.3E-48 T 14-10-2018 DB29_03491 21279fe6bedc1511093c7a28d8b5b72b 769 SUPERFAMILY SSF53955 81 303 8.15E-63 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily DB29_03491 21279fe6bedc1511093c7a28d8b5b72b 769 Pfam PF00905 Penicillin binding protein transpeptidase domain 406 645 1.3E-27 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 DB29_03491 21279fe6bedc1511093c7a28d8b5b72b 769 Pfam PF00912 Transglycosylase 92 279 8.1E-56 T 14-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DB29_03491 21279fe6bedc1511093c7a28d8b5b72b 769 SUPERFAMILY SSF56601 267 730 4.54E-93 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like DB29_03491 21279fe6bedc1511093c7a28d8b5b72b 769 Gene3D G3DSA:1.10.20.80 316 581 3.9E-106 T 14-10-2018 DB29_03491 21279fe6bedc1511093c7a28d8b5b72b 769 Gene3D G3DSA:3.40.710.10 374 692 3.9E-106 T 14-10-2018 DB29_03491 21279fe6bedc1511093c7a28d8b5b72b 769 Gene3D G3DSA:1.10.3810.10 101 312 4.5E-69 T 14-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DB29_02743 4b281a69e3f373d2c272b43813ae857f 419 Gene3D G3DSA:3.40.190.10 59 371 2.1E-104 T 14-10-2018 DB29_02743 4b281a69e3f373d2c272b43813ae857f 419 PRINTS PR00181 Maltose binding protein signature 371 390 9.1E-9 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 DB29_02743 4b281a69e3f373d2c272b43813ae857f 419 PRINTS PR00181 Maltose binding protein signature 138 157 9.1E-9 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 DB29_02743 4b281a69e3f373d2c272b43813ae857f 419 PRINTS PR00181 Maltose binding protein signature 159 178 9.1E-9 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 DB29_02743 4b281a69e3f373d2c272b43813ae857f 419 PRINTS PR00181 Maltose binding protein signature 313 334 9.1E-9 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 DB29_02743 4b281a69e3f373d2c272b43813ae857f 419 PRINTS PR00181 Maltose binding protein signature 246 265 9.1E-9 T 14-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 DB29_02743 4b281a69e3f373d2c272b43813ae857f 419 Gene3D G3DSA:3.40.190.10 147 404 2.1E-104 T 14-10-2018 DB29_02743 4b281a69e3f373d2c272b43813ae857f 419 Pfam PF13416 Bacterial extracellular solute-binding protein 54 358 7.0E-50 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein DB29_02743 4b281a69e3f373d2c272b43813ae857f 419 SUPERFAMILY SSF53850 43 409 1.73E-82 T 14-10-2018 DB29_00616 74ea9b18361c132938ee1a22a19205ac 111 SUPERFAMILY SSF54593 2 100 1.88E-20 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DB29_00616 74ea9b18361c132938ee1a22a19205ac 111 Gene3D G3DSA:3.10.180.10 2 107 6.4E-19 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DB29_03529 a4d273105fc9ab57239d6ac44fa06658 280 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 16 280 4.2E-124 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 DB29_03529 a4d273105fc9ab57239d6ac44fa06658 280 SUPERFAMILY SSF52096 28 279 5.68E-81 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily DB29_03529 a4d273105fc9ab57239d6ac44fa06658 280 Pfam PF01039 Carboxyl transferase domain 59 240 1.5E-17 T 14-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 DB29_03529 a4d273105fc9ab57239d6ac44fa06658 280 Gene3D G3DSA:3.90.226.10 28 280 2.6E-91 T 14-10-2018 DB29_03529 a4d273105fc9ab57239d6ac44fa06658 280 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 3 280 38.7 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 DB29_03529 a4d273105fc9ab57239d6ac44fa06658 280 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 163 181 2.8E-36 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 DB29_03529 a4d273105fc9ab57239d6ac44fa06658 280 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 200 217 2.8E-36 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 DB29_03529 a4d273105fc9ab57239d6ac44fa06658 280 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 229 240 2.8E-36 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 DB29_03529 a4d273105fc9ab57239d6ac44fa06658 280 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 129 143 2.8E-36 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 DB29_03529 a4d273105fc9ab57239d6ac44fa06658 280 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 251 260 2.8E-36 T 14-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 DB29_00913 6ce74ee003017d619742e90b3f2c962b 240 TIGRFAM TIGR01768 GGGP-family: geranylgeranylglyceryl phosphate synthase family protein 17 231 1.6E-65 T 14-10-2018 IPR008205 Geranylgeranylglyceryl phosphate synthase/Heptaprenylglyceryl phosphate synthase GO:0016765 DB29_00913 6ce74ee003017d619742e90b3f2c962b 240 Pfam PF01884 PcrB family 13 234 9.9E-74 T 14-10-2018 IPR008205 Geranylgeranylglyceryl phosphate synthase/Heptaprenylglyceryl phosphate synthase GO:0016765 DB29_00913 6ce74ee003017d619742e90b3f2c962b 240 SUPERFAMILY SSF51395 12 231 2.01E-50 T 14-10-2018 DB29_00913 6ce74ee003017d619742e90b3f2c962b 240 Hamap MF_00112 Geranylgeranylglyceryl phosphate synthase [pcrB]. 10 234 27.771 T 14-10-2018 IPR008205 Geranylgeranylglyceryl phosphate synthase/Heptaprenylglyceryl phosphate synthase GO:0016765 DB29_00913 6ce74ee003017d619742e90b3f2c962b 240 Gene3D G3DSA:3.20.20.390 4 238 5.6E-89 T 14-10-2018 IPR038597 GGGP/HepGP synthase superfamily DB29_03246 4fc9fb0a6152e55117d9986892890e8f 393 TIGRFAM TIGR00443 hisZ_biosyn_reg: ATP phosphoribosyltransferase, regulatory subunit 14 324 2.2E-96 T 14-10-2018 IPR004517 ATP phosphoribosyltransferase regulatory subunit GO:0000105|GO:0005737 DB29_03246 4fc9fb0a6152e55117d9986892890e8f 393 Pfam PF13393 Histidyl-tRNA synthetase 12 318 2.1E-72 T 14-10-2018 DB29_03246 4fc9fb0a6152e55117d9986892890e8f 393 Gene3D G3DSA:3.40.50.12590 327 393 2.2E-21 T 14-10-2018 DB29_03246 4fc9fb0a6152e55117d9986892890e8f 393 Gene3D G3DSA:3.30.930.10 1 325 8.2E-100 T 14-10-2018 DB29_03246 4fc9fb0a6152e55117d9986892890e8f 393 Hamap MF_00125 ATP phosphoribosyltransferase regulatory subunit [hisZ]. 19 374 31.481 T 14-10-2018 IPR004517 ATP phosphoribosyltransferase regulatory subunit GO:0000105|GO:0005737 DB29_03246 4fc9fb0a6152e55117d9986892890e8f 393 SUPERFAMILY SSF55681 7 327 3.78E-60 T 14-10-2018 DB29_03246 4fc9fb0a6152e55117d9986892890e8f 393 PIRSF PIRSF001549 3 390 1.1E-78 T 14-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 DB29_00437 476d9d3f8ab89e8338c02a788547838f 255 Pfam PF00899 ThiF family 6 158 2.0E-38 T 14-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 DB29_00437 476d9d3f8ab89e8338c02a788547838f 255 Gene3D G3DSA:3.40.50.720 1 254 1.0E-81 T 14-10-2018 DB29_00437 476d9d3f8ab89e8338c02a788547838f 255 SUPERFAMILY SSF69572 4 246 2.88E-64 T 14-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 DB29_00976 1357f622f8ce75da5188cbcf76fa8fa2 530 SUPERFAMILY SSF55785 215 286 3.05E-6 T 14-10-2018 IPR035965 PAS domain superfamily DB29_00976 1357f622f8ce75da5188cbcf76fa8fa2 530 SMART SM00387 416 525 2.4E-21 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DB29_00976 1357f622f8ce75da5188cbcf76fa8fa2 530 Pfam PF00989 PAS fold 213 282 4.5E-5 T 14-10-2018 IPR013767 PAS fold GO:0006355 DB29_00976 1357f622f8ce75da5188cbcf76fa8fa2 530 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 320 362 9.2E-8 T 14-10-2018 IPR039506 SpoOB, alpha-helical domain DB29_00976 1357f622f8ce75da5188cbcf76fa8fa2 530 SUPERFAMILY SSF55890 324 388 1.12E-8 T 14-10-2018 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB GO:0000155|GO:0000160|GO:0016772 DB29_00976 1357f622f8ce75da5188cbcf76fa8fa2 530 Gene3D G3DSA:3.30.450.20 29 163 9.1E-45 T 14-10-2018 DB29_00976 1357f622f8ce75da5188cbcf76fa8fa2 530 Gene3D G3DSA:3.30.565.10 371 521 3.9E-27 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB29_00976 1357f622f8ce75da5188cbcf76fa8fa2 530 Pfam PF17203 Single cache domain 3 33 164 1.8E-28 T 14-10-2018 IPR033463 Single cache domain 3 DB29_00976 1357f622f8ce75da5188cbcf76fa8fa2 530 SUPERFAMILY SSF103190 35 167 1.69E-37 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily DB29_00976 1357f622f8ce75da5188cbcf76fa8fa2 530 PRINTS PR00344 Bacterial sensor protein C-terminal signature 485 503 3.1E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB29_00976 1357f622f8ce75da5188cbcf76fa8fa2 530 PRINTS PR00344 Bacterial sensor protein C-terminal signature 509 522 3.1E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB29_00976 1357f622f8ce75da5188cbcf76fa8fa2 530 PRINTS PR00344 Bacterial sensor protein C-terminal signature 473 483 3.1E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB29_00976 1357f622f8ce75da5188cbcf76fa8fa2 530 PRINTS PR00344 Bacterial sensor protein C-terminal signature 455 469 3.1E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB29_00976 1357f622f8ce75da5188cbcf76fa8fa2 530 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 420 524 5.9E-18 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DB29_00976 1357f622f8ce75da5188cbcf76fa8fa2 530 SUPERFAMILY SSF55874 393 523 5.76E-25 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB29_00976 1357f622f8ce75da5188cbcf76fa8fa2 530 Gene3D G3DSA:3.30.450.20 198 310 4.1E-20 T 14-10-2018 DB29_00976 1357f622f8ce75da5188cbcf76fa8fa2 530 SMART SM00091 212 278 2.9E-5 T 14-10-2018 IPR000014 PAS domain DB29_00635 8abad41a9ee873913483b797e2d7297c 550 Pfam PF14130 Domain of unknown function (DUF4297) 49 270 1.3E-12 T 14-10-2018 IPR025382 Domain of unknown function DUF4297 DB29_03028 56e766545103fb1c7b9967d8ba31ef04 425 Pfam PF11700 Vacuole effluxer Atg22 like 10 416 1.8E-61 T 14-10-2018 IPR024671 Autophagy-related protein 22-like DB29_03028 56e766545103fb1c7b9967d8ba31ef04 425 Gene3D G3DSA:1.20.1250.20 13 205 1.1E-7 T 14-10-2018 DB29_03028 56e766545103fb1c7b9967d8ba31ef04 425 Gene3D G3DSA:1.20.1250.20 228 422 1.1E-21 T 14-10-2018 DB29_03028 56e766545103fb1c7b9967d8ba31ef04 425 SUPERFAMILY SSF103473 14 420 9.02E-43 T 14-10-2018 IPR036259 MFS transporter superfamily DB29_00902 46547183fcc3177b45bfa85b103716c5 95 Hamap MF_00122 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C [gatC]. 3 93 24.015 T 14-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 DB29_00902 46547183fcc3177b45bfa85b103716c5 95 Pfam PF02686 Glu-tRNAGln amidotransferase C subunit 20 91 2.8E-21 T 14-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 DB29_00902 46547183fcc3177b45bfa85b103716c5 95 TIGRFAM TIGR00135 gatC: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit 4 94 1.9E-33 T 14-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 DB29_00902 46547183fcc3177b45bfa85b103716c5 95 SUPERFAMILY SSF141000 3 94 3.01E-32 T 14-10-2018 IPR036113 Glu-tRNAGln amidotransferase superfamily, subunit C GO:0006450 DB29_00902 46547183fcc3177b45bfa85b103716c5 95 Gene3D G3DSA:1.10.20.60 1 94 3.4E-32 T 14-10-2018 DB29_00333 326e02a6f2aa443a9fe37537cda2f3fb 341 Hamap MF_01562 UPF0365 protein . 4 324 48.629 T 14-10-2018 IPR022853 Uncharacterised protein family YdfA-immunity DB29_00333 326e02a6f2aa443a9fe37537cda2f3fb 341 Pfam PF12127 SigmaW regulon antibacterial 10 321 2.1E-163 T 14-10-2018 IPR022853 Uncharacterised protein family YdfA-immunity DB29_01358 9d126f9f12ecad2d988798f3916900b5 441 Pfam PF03600 Citrate transporter 13 385 1.3E-45 T 14-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 DB29_01358 9d126f9f12ecad2d988798f3916900b5 441 TIGRFAM TIGR00784 citMHS: citrate transporter 1 441 9.0E-182 T 14-10-2018 IPR014738 Citrate transporter GO:0015137|GO:0015746 DB29_02392 0b54c3540d1862be314f1f324eea3094 483 SUPERFAMILY SSF53720 2 482 7.72E-152 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 DB29_02392 0b54c3540d1862be314f1f324eea3094 483 Gene3D G3DSA:3.40.605.10 9 477 4.4E-156 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 DB29_02392 0b54c3540d1862be314f1f324eea3094 483 Gene3D G3DSA:3.40.309.10 254 448 4.4E-156 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 DB29_02392 0b54c3540d1862be314f1f324eea3094 483 Pfam PF00171 Aldehyde dehydrogenase family 22 479 6.9E-157 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 DB29_02392 0b54c3540d1862be314f1f324eea3094 483 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 249 256 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 DB29_02392 0b54c3540d1862be314f1f324eea3094 483 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 277 288 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 DB29_02774 1dc4cf1585a4b5359bf4dce1317b4bd8 311 SUPERFAMILY SSF51197 27 291 5.4E-63 T 14-10-2018 DB29_02774 1dc4cf1585a4b5359bf4dce1317b4bd8 311 TIGRFAM TIGR02408 ectoine_ThpD: ectoine hydroxylase 21 296 3.9E-113 T 14-10-2018 IPR012774 Ectoine dioxygenase GO:0016706|GO:0055114 DB29_02774 1dc4cf1585a4b5359bf4dce1317b4bd8 311 Pfam PF05721 Phytanoyl-CoA dioxygenase (PhyH) 42 259 2.4E-33 T 14-10-2018 IPR008775 Phytanoyl-CoA dioxygenase DB29_02774 1dc4cf1585a4b5359bf4dce1317b4bd8 311 Gene3D G3DSA:2.60.120.620 4 311 6.6E-113 T 14-10-2018 DB29_01981 76287595005b16a1a4de19feff1bfd02 87 PIRSF PIRSF037257 1 85 3.3E-35 T 14-10-2018 IPR009366 Protein Veg GO:0006355 DB29_01981 76287595005b16a1a4de19feff1bfd02 87 Pfam PF06257 Biofilm formation stimulator VEG 3 74 2.0E-30 T 14-10-2018 IPR009366 Protein Veg GO:0006355 DB29_01981 76287595005b16a1a4de19feff1bfd02 87 Gene3D G3DSA:2.30.30.100 1 77 4.8E-25 T 14-10-2018 DB29_02050 e1b0acbb896b0de733fa82f48e1658b6 199 Pfam PF01569 PAP2 superfamily 90 171 2.2E-18 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase DB29_02050 e1b0acbb896b0de733fa82f48e1658b6 199 Gene3D G3DSA:1.20.144.10 74 197 1.5E-21 T 14-10-2018 DB29_02050 e1b0acbb896b0de733fa82f48e1658b6 199 SUPERFAMILY SSF48317 3 177 2.35E-35 T 14-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily DB29_02050 e1b0acbb896b0de733fa82f48e1658b6 199 SMART SM00014 61 166 5.4E-18 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase DB29_02475 e2dbf89f2e47be0408bf9e240cb1fe5d 386 Pfam PF01425 Amidase 283 372 8.3E-10 T 14-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 DB29_02475 e2dbf89f2e47be0408bf9e240cb1fe5d 386 Pfam PF01425 Amidase 8 187 1.0E-55 T 14-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 DB29_02475 e2dbf89f2e47be0408bf9e240cb1fe5d 386 SUPERFAMILY SSF75304 4 381 2.88E-90 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 DB29_02475 e2dbf89f2e47be0408bf9e240cb1fe5d 386 ProSitePatterns PS00571 Amidases signature. 104 135 - T 14-10-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 DB29_02475 e2dbf89f2e47be0408bf9e240cb1fe5d 386 Gene3D G3DSA:3.90.1300.10 4 383 3.2E-95 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 DB29_02684 4f16b6264b3250dc7a3919156a1652a1 2433 SUPERFAMILY SSF49478 1588 1655 1.14E-6 T 14-10-2018 DB29_02684 4f16b6264b3250dc7a3919156a1652a1 2433 SUPERFAMILY SSF49478 2056 2121 5.1E-8 T 14-10-2018 DB29_02684 4f16b6264b3250dc7a3919156a1652a1 2433 SUPERFAMILY SSF49478 2244 2310 1.33E-8 T 14-10-2018 DB29_02684 4f16b6264b3250dc7a3919156a1652a1 2433 SUPERFAMILY SSF49401 961 1096 2.98E-23 T 14-10-2018 IPR008966 Adhesion domain superfamily DB29_02684 4f16b6264b3250dc7a3919156a1652a1 2433 SUPERFAMILY SSF49478 1683 1745 7.85E-8 T 14-10-2018 DB29_02684 4f16b6264b3250dc7a3919156a1652a1 2433 Gene3D G3DSA:2.60.40.10 1670 1762 9.2E-28 T 14-10-2018 IPR013783 Immunoglobulin-like fold DB29_02684 4f16b6264b3250dc7a3919156a1652a1 2433 Gene3D G3DSA:2.60.40.10 2139 2231 7.3E-26 T 14-10-2018 IPR013783 Immunoglobulin-like fold DB29_02684 4f16b6264b3250dc7a3919156a1652a1 2433 Gene3D G3DSA:2.60.40.10 1107 1200 5.5E-20 T 14-10-2018 IPR013783 Immunoglobulin-like fold DB29_02684 4f16b6264b3250dc7a3919156a1652a1 2433 Gene3D G3DSA:2.60.40.10 1484 1576 2.5E-27 T 14-10-2018 IPR013783 Immunoglobulin-like fold DB29_02684 4f16b6264b3250dc7a3919156a1652a1 2433 Gene3D G3DSA:2.60.40.10 1386 1483 7.0E-27 T 14-10-2018 IPR013783 Immunoglobulin-like fold DB29_02684 4f16b6264b3250dc7a3919156a1652a1 2433 Gene3D G3DSA:2.60.40.10 2232 2328 1.2E-27 T 14-10-2018 IPR013783 Immunoglobulin-like fold DB29_02684 4f16b6264b3250dc7a3919156a1652a1 2433 Gene3D G3DSA:2.60.40.10 1201 1294 2.6E-24 T 14-10-2018 IPR013783 Immunoglobulin-like fold DB29_02684 4f16b6264b3250dc7a3919156a1652a1 2433 Gene3D G3DSA:2.60.40.10 1763 1855 4.3E-25 T 14-10-2018 IPR013783 Immunoglobulin-like fold DB29_02684 4f16b6264b3250dc7a3919156a1652a1 2433 Gene3D G3DSA:2.60.40.10 1577 1669 8.4E-26 T 14-10-2018 IPR013783 Immunoglobulin-like fold DB29_02684 4f16b6264b3250dc7a3919156a1652a1 2433 Gene3D G3DSA:2.60.40.10 1951 2046 3.4E-25 T 14-10-2018 IPR013783 Immunoglobulin-like fold DB29_02684 4f16b6264b3250dc7a3919156a1652a1 2433 Gene3D G3DSA:2.60.40.10 2047 2138 2.8E-24 T 14-10-2018 IPR013783 Immunoglobulin-like fold DB29_02684 4f16b6264b3250dc7a3919156a1652a1 2433 Gene3D G3DSA:2.60.40.10 1295 1385 1.2E-20 T 14-10-2018 IPR013783 Immunoglobulin-like fold DB29_02684 4f16b6264b3250dc7a3919156a1652a1 2433 Gene3D G3DSA:2.60.40.10 1856 1950 1.2E-23 T 14-10-2018 IPR013783 Immunoglobulin-like fold DB29_02684 4f16b6264b3250dc7a3919156a1652a1 2433 Pfam PF00746 LPXTG cell wall anchor motif 2392 2428 1.1E-5 T 14-10-2018 IPR019948 Gram-positive LPXTG cell wall anchor DB29_02684 4f16b6264b3250dc7a3919156a1652a1 2433 Pfam PF05737 Collagen binding domain 563 661 4.0E-12 T 14-10-2018 IPR008456 Collagen binding domain GO:0005518 DB29_02684 4f16b6264b3250dc7a3919156a1652a1 2433 Pfam PF05737 Collagen binding domain 821 945 4.2E-23 T 14-10-2018 IPR008456 Collagen binding domain GO:0005518 DB29_02684 4f16b6264b3250dc7a3919156a1652a1 2433 Pfam PF05737 Collagen binding domain 421 543 1.6E-30 T 14-10-2018 IPR008456 Collagen binding domain GO:0005518 DB29_02684 4f16b6264b3250dc7a3919156a1652a1 2433 Pfam PF05737 Collagen binding domain 967 1091 8.5E-13 T 14-10-2018 IPR008456 Collagen binding domain GO:0005518 DB29_02684 4f16b6264b3250dc7a3919156a1652a1 2433 Pfam PF05737 Collagen binding domain 690 792 1.1E-7 T 14-10-2018 IPR008456 Collagen binding domain GO:0005518 DB29_02684 4f16b6264b3250dc7a3919156a1652a1 2433 Gene3D G3DSA:2.60.40.1280 288 415 1.7E-16 T 14-10-2018 IPR011252 Fibrogen-binding domain 1 GO:0007155 DB29_02684 4f16b6264b3250dc7a3919156a1652a1 2433 SUPERFAMILY SSF49478 1398 1464 6.28E-7 T 14-10-2018 DB29_02684 4f16b6264b3250dc7a3919156a1652a1 2433 SUPERFAMILY SSF49401 274 443 2.36E-17 T 14-10-2018 IPR008966 Adhesion domain superfamily DB29_02684 4f16b6264b3250dc7a3919156a1652a1 2433 SUPERFAMILY SSF49401 420 550 1.62E-24 T 14-10-2018 IPR008966 Adhesion domain superfamily DB29_02684 4f16b6264b3250dc7a3919156a1652a1 2433 SUPERFAMILY SSF49478 1210 1280 4.71E-6 T 14-10-2018 DB29_02684 4f16b6264b3250dc7a3919156a1652a1 2433 SUPERFAMILY SSF49401 693 803 1.54E-17 T 14-10-2018 IPR008966 Adhesion domain superfamily DB29_02684 4f16b6264b3250dc7a3919156a1652a1 2433 SUPERFAMILY SSF49401 822 959 9.19E-25 T 14-10-2018 IPR008966 Adhesion domain superfamily DB29_02684 4f16b6264b3250dc7a3919156a1652a1 2433 SUPERFAMILY SSF49478 1958 2029 9.42E-7 T 14-10-2018 DB29_02684 4f16b6264b3250dc7a3919156a1652a1 2433 SUPERFAMILY SSF49478 2148 2212 7.06E-7 T 14-10-2018 DB29_02684 4f16b6264b3250dc7a3919156a1652a1 2433 SUPERFAMILY SSF49401 556 690 6.21E-22 T 14-10-2018 IPR008966 Adhesion domain superfamily DB29_02684 4f16b6264b3250dc7a3919156a1652a1 2433 SUPERFAMILY SSF49478 1777 1836 1.45E-6 T 14-10-2018 DB29_02684 4f16b6264b3250dc7a3919156a1652a1 2433 SUPERFAMILY SSF49478 1868 1938 8.63E-9 T 14-10-2018 DB29_02684 4f16b6264b3250dc7a3919156a1652a1 2433 TIGRFAM TIGR01167 LPXTG_anchor: LPXTG cell wall anchor domain 2396 2424 1.4E-5 T 14-10-2018 DB29_02684 4f16b6264b3250dc7a3919156a1652a1 2433 SUPERFAMILY SSF49478 1497 1554 2.47E-6 T 14-10-2018 DB29_02684 4f16b6264b3250dc7a3919156a1652a1 2433 SUPERFAMILY SSF49478 1120 1178 2.86E-7 T 14-10-2018 DB29_02684 4f16b6264b3250dc7a3919156a1652a1 2433 SUPERFAMILY SSF49478 1304 1369 1.61E-6 T 14-10-2018 DB29_02975 3a8ecfc0e525e582134939753580d5d7 230 Pfam PF03591 AzlC protein 17 154 2.4E-34 T 14-10-2018 IPR011606 Branched-chain amino acid transport, permease DB29_02514 f501d1d4da6550ae9d00011c59447578 292 SUPERFAMILY SSF53448 6 245 7.13E-19 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DB29_02514 f501d1d4da6550ae9d00011c59447578 292 Pfam PF00535 Glycosyl transferase family 2 6 181 2.9E-12 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 DB29_02514 f501d1d4da6550ae9d00011c59447578 292 Gene3D G3DSA:3.90.550.10 1 222 2.3E-14 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DB29_00617 a19b431fb0071f5614cc721efe908e31 117 Pfam PF04237 YjbR 12 99 2.7E-12 T 14-10-2018 IPR007351 Uncharacterised protein YjbR DB29_00617 a19b431fb0071f5614cc721efe908e31 117 SUPERFAMILY SSF142906 1 110 2.09E-14 T 14-10-2018 IPR038056 YjbR-like superfamily DB29_01007 e6c4a8da717a612650ce1634fac7a582 272 Gene3D G3DSA:1.20.120.530 115 268 5.2E-31 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DB29_01007 e6c4a8da717a612650ce1634fac7a582 272 Gene3D G3DSA:1.10.10.10 33 106 2.6E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_01007 e6c4a8da717a612650ce1634fac7a582 272 SMART SM00895 127 254 5.4E-24 T 14-10-2018 IPR011711 GntR, C-terminal DB29_01007 e6c4a8da717a612650ce1634fac7a582 272 Pfam PF07729 FCD domain 127 252 1.1E-26 T 14-10-2018 IPR011711 GntR, C-terminal DB29_01007 e6c4a8da717a612650ce1634fac7a582 272 SUPERFAMILY SSF48008 124 261 1.83E-29 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DB29_01007 e6c4a8da717a612650ce1634fac7a582 272 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 62 76 2.2E-5 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DB29_01007 e6c4a8da717a612650ce1634fac7a582 272 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 76 92 2.2E-5 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DB29_01007 e6c4a8da717a612650ce1634fac7a582 272 Pfam PF00392 Bacterial regulatory proteins, gntR family 42 102 6.1E-19 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DB29_01007 e6c4a8da717a612650ce1634fac7a582 272 SUPERFAMILY SSF46785 34 106 7.64E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_01007 e6c4a8da717a612650ce1634fac7a582 272 SMART SM00345 43 102 4.7E-22 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DB29_00661 1eec7688bb1a04f0d3eb7e06daa7c256 98 Pfam PF06153 Cyclic-di-AMP receptor 1 66 8.1E-16 T 14-10-2018 IPR010375 Cyclic-di-AMP receptor DB29_00661 1eec7688bb1a04f0d3eb7e06daa7c256 98 Gene3D G3DSA:3.30.70.120 1 69 8.4E-23 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal DB29_00661 1eec7688bb1a04f0d3eb7e06daa7c256 98 SUPERFAMILY SSF54913 1 64 6.35E-9 T 14-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta DB29_02924 e71a5d3748b45ee969393c80bc69fa26 183 Pfam PF01380 SIS domain 35 130 5.7E-9 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 DB29_02924 e71a5d3748b45ee969393c80bc69fa26 183 SUPERFAMILY SSF53697 4 172 8.29E-29 T 14-10-2018 DB29_02924 e71a5d3748b45ee969393c80bc69fa26 183 TIGRFAM TIGR03127 RuMP_HxlB: 6-phospho 3-hexuloisomerase 9 183 1.2E-69 T 14-10-2018 IPR017552 3-hexulose-6-phosphate isomerase GO:0016853 DB29_02924 e71a5d3748b45ee969393c80bc69fa26 183 Gene3D G3DSA:3.40.50.10490 3 183 9.3E-44 T 14-10-2018 DB29_00854 2e61e42bf7c82043d258262caf7b55c1 782 Gene3D G3DSA:2.70.98.50 16 290 4.9E-212 T 14-10-2018 DB29_00854 2e61e42bf7c82043d258262caf7b55c1 782 Gene3D G3DSA:1.50.10.10 12 734 4.9E-212 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 DB29_00854 2e61e42bf7c82043d258262caf7b55c1 782 SUPERFAMILY SSF48208 257 731 4.08E-77 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 DB29_00854 2e61e42bf7c82043d258262caf7b55c1 782 PIRSF PIRSF007663 1 777 3.5E-242 T 14-10-2018 IPR016518 Alpha-L-fucosidase GO:0004560 KEGG: 00511+3.2.1.51|MetaCyc: PWY-6807 DB29_00854 2e61e42bf7c82043d258262caf7b55c1 782 Pfam PF14498 Glycosyl hydrolase family 65, N-terminal domain 3 247 5.3E-60 T 14-10-2018 IPR027414 Glycosyl hydrolase family 95, N-terminal domain KEGG: 00511+3.2.1.51|MetaCyc: PWY-6807 DB29_00854 2e61e42bf7c82043d258262caf7b55c1 782 Gene3D G3DSA:2.60.40.1180 291 777 4.9E-212 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta DB29_00447 7423d1ea12e7e3acd476e07c47c02c08 335 Gene3D G3DSA:1.10.260.40 1 57 1.6E-23 T 14-10-2018 DB29_00447 7423d1ea12e7e3acd476e07c47c02c08 335 Gene3D G3DSA:3.40.50.2300 160 295 3.7E-67 T 14-10-2018 DB29_00447 7423d1ea12e7e3acd476e07c47c02c08 335 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 14-10-2018 DB29_00447 7423d1ea12e7e3acd476e07c47c02c08 335 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 60 313 5.4E-34 T 14-10-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain DB29_00447 7423d1ea12e7e3acd476e07c47c02c08 335 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 4.9E-21 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DB29_00447 7423d1ea12e7e3acd476e07c47c02c08 335 Gene3D G3DSA:3.40.50.2300 62 308 3.7E-67 T 14-10-2018 DB29_00447 7423d1ea12e7e3acd476e07c47c02c08 335 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 6.4E-6 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DB29_00447 7423d1ea12e7e3acd476e07c47c02c08 335 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 6.4E-6 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DB29_00447 7423d1ea12e7e3acd476e07c47c02c08 335 SUPERFAMILY SSF47413 1 59 2.65E-18 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DB29_00447 7423d1ea12e7e3acd476e07c47c02c08 335 SMART SM00354 1 71 6.6E-33 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DB29_00447 7423d1ea12e7e3acd476e07c47c02c08 335 SUPERFAMILY SSF53822 60 335 1.59E-70 T 14-10-2018 IPR028082 Periplasmic binding protein-like I DB29_00295 1e728197703205016597e46b9bc41288 367 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 5 355 34.598 T 14-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 DB29_00295 1e728197703205016597e46b9bc41288 367 SUPERFAMILY SSF51717 15 236 3.53E-17 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DB29_00295 1e728197703205016597e46b9bc41288 367 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 7 350 3.4E-132 T 14-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 DB29_00295 1e728197703205016597e46b9bc41288 367 Gene3D G3DSA:3.20.20.20 1 259 1.1E-110 T 14-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 DB29_00295 1e728197703205016597e46b9bc41288 367 SUPERFAMILY SSF56014 264 362 1.21E-14 T 14-10-2018 DB29_00295 1e728197703205016597e46b9bc41288 367 Gene3D G3DSA:3.30.413.10 261 360 7.3E-36 T 14-10-2018 DB29_00295 1e728197703205016597e46b9bc41288 367 Pfam PF04551 GcpE protein 10 351 2.7E-140 T 14-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 DB29_00295 1e728197703205016597e46b9bc41288 367 PIRSF PIRSF004640 1 361 9.4E-157 T 14-10-2018 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 DB29_04371 41b334dfa59453370d2059a0730ad985 135 Pfam PF13380 CoA binding domain 17 131 3.4E-39 T 14-10-2018 IPR003781 CoA-binding GO:0048037 DB29_04371 41b334dfa59453370d2059a0730ad985 135 Gene3D G3DSA:3.40.50.720 1 135 9.0E-42 T 14-10-2018 DB29_04371 41b334dfa59453370d2059a0730ad985 135 SUPERFAMILY SSF51735 3 132 2.81E-42 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_04371 41b334dfa59453370d2059a0730ad985 135 SMART SM00881 12 105 4.2E-23 T 14-10-2018 IPR003781 CoA-binding GO:0048037 DB29_01558 d2dcc07d5371c9dca93e373ef137f389 162 Pfam PF06445 GyrI-like small molecule binding domain 5 134 2.8E-16 T 14-10-2018 IPR029442 GyrI-like small molecule binding domain DB29_01558 d2dcc07d5371c9dca93e373ef137f389 162 SMART SM00871 4 160 1.1E-14 T 14-10-2018 IPR010499 Bacterial transcription activator, effector binding DB29_01558 d2dcc07d5371c9dca93e373ef137f389 162 SUPERFAMILY SSF55136 6 160 6.63E-17 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily DB29_01558 d2dcc07d5371c9dca93e373ef137f389 162 Gene3D G3DSA:3.20.80.10 5 162 5.1E-15 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily DB29_03768 d62e30d0636c15e2473e7a3009673af1 61 Pfam PF10958 Protein of unknown function (DUF2759) 6 55 5.8E-19 T 14-10-2018 IPR024490 Protein of unknown function DUF2759 DB29_03768 d62e30d0636c15e2473e7a3009673af1 61 ProDom PD052097 RELATED ALKALIPHILY YQGW MEMBRANE TRANSMEMBRANE SPANNING 1 55 3.0E-15 T 14-10-2018 IPR024490 Protein of unknown function DUF2759 DB29_04295 3b72107bb07e90cad30193db4fdd2319 127 PIRSF PIRSF006246 1 126 5.6E-55 T 14-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 DB29_04295 3b72107bb07e90cad30193db4fdd2319 127 ProDom PD009294 ASPARTATE 1-DECARBOXYLASE DECARBOXYLASE CHAIN LYASE ALPHA ALPHA- CONTAINS: PRECURSOR BETA 5 93 1.0E-46 T 14-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 DB29_04295 3b72107bb07e90cad30193db4fdd2319 127 TIGRFAM TIGR00223 panD: aspartate 1-decarboxylase 1 125 2.8E-60 T 14-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 DB29_04295 3b72107bb07e90cad30193db4fdd2319 127 SUPERFAMILY SSF50692 1 121 7.46E-52 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily DB29_04295 3b72107bb07e90cad30193db4fdd2319 127 Gene3D G3DSA:2.40.40.20 1 125 2.0E-55 T 14-10-2018 DB29_04295 3b72107bb07e90cad30193db4fdd2319 127 Pfam PF02261 Aspartate decarboxylase 1 114 2.4E-54 T 14-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 DB29_04295 3b72107bb07e90cad30193db4fdd2319 127 Hamap MF_00446 Aspartate 1-decarboxylase [panD]. 1 127 75.642 T 14-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 DB29_01823 a05ae6793f88b235fb68348686a25c52 407 Pfam PF07949 YbbR-like protein 235 313 5.2E-15 T 14-10-2018 IPR012505 YbbR-like DB29_01823 a05ae6793f88b235fb68348686a25c52 407 Pfam PF07949 YbbR-like protein 143 226 2.5E-17 T 14-10-2018 IPR012505 YbbR-like DB29_01823 a05ae6793f88b235fb68348686a25c52 407 Gene3D G3DSA:2.170.120.30 40 142 9.2E-17 T 14-10-2018 DB29_01823 a05ae6793f88b235fb68348686a25c52 407 Gene3D G3DSA:2.170.120.30 316 402 5.0E-11 T 14-10-2018 DB29_01823 a05ae6793f88b235fb68348686a25c52 407 Gene3D G3DSA:2.170.120.40 232 315 1.8E-16 T 14-10-2018 DB29_01823 a05ae6793f88b235fb68348686a25c52 407 Gene3D G3DSA:2.170.120.40 143 230 8.1E-8 T 14-10-2018 DB29_03817 5ce9ff59f504bd9bea528ad97ccbdcac 473 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 4 472 2.5E-162 T 14-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 DB29_03817 5ce9ff59f504bd9bea528ad97ccbdcac 473 SUPERFAMILY SSF51905 2 343 6.07E-56 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB29_03817 5ce9ff59f504bd9bea528ad97ccbdcac 473 Gene3D G3DSA:3.50.50.60 162 285 2.8E-108 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB29_03817 5ce9ff59f504bd9bea528ad97ccbdcac 473 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 39 49 - T 14-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 DB29_03817 5ce9ff59f504bd9bea528ad97ccbdcac 473 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 354 462 2.6E-33 T 14-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 DB29_03817 5ce9ff59f504bd9bea528ad97ccbdcac 473 SUPERFAMILY SSF55424 350 472 5.67E-39 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 DB29_03817 5ce9ff59f504bd9bea528ad97ccbdcac 473 PIRSF PIRSF000350 1 469 4.4E-80 T 14-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 DB29_03817 5ce9ff59f504bd9bea528ad97ccbdcac 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 415 430 2.2E-63 T 14-10-2018 DB29_03817 5ce9ff59f504bd9bea528ad97ccbdcac 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 146 155 2.2E-63 T 14-10-2018 DB29_03817 5ce9ff59f504bd9bea528ad97ccbdcac 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 272 286 2.2E-63 T 14-10-2018 DB29_03817 5ce9ff59f504bd9bea528ad97ccbdcac 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 437 457 2.2E-63 T 14-10-2018 DB29_03817 5ce9ff59f504bd9bea528ad97ccbdcac 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 2.2E-63 T 14-10-2018 DB29_03817 5ce9ff59f504bd9bea528ad97ccbdcac 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 38 53 2.2E-63 T 14-10-2018 DB29_03817 5ce9ff59f504bd9bea528ad97ccbdcac 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 182 207 2.2E-63 T 14-10-2018 DB29_03817 5ce9ff59f504bd9bea528ad97ccbdcac 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 314 321 2.2E-63 T 14-10-2018 DB29_03817 5ce9ff59f504bd9bea528ad97ccbdcac 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 350 371 2.2E-63 T 14-10-2018 DB29_03817 5ce9ff59f504bd9bea528ad97ccbdcac 473 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 334 8.1E-61 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DB29_03817 5ce9ff59f504bd9bea528ad97ccbdcac 473 Gene3D G3DSA:3.30.390.30 353 473 4.8E-43 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 DB29_03817 5ce9ff59f504bd9bea528ad97ccbdcac 473 Gene3D G3DSA:3.50.50.60 5 338 2.8E-108 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB29_03817 5ce9ff59f504bd9bea528ad97ccbdcac 473 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 182 200 9.5E-33 T 14-10-2018 DB29_03817 5ce9ff59f504bd9bea528ad97ccbdcac 473 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 9.5E-33 T 14-10-2018 DB29_03817 5ce9ff59f504bd9bea528ad97ccbdcac 473 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 143 161 9.5E-33 T 14-10-2018 DB29_03817 5ce9ff59f504bd9bea528ad97ccbdcac 473 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 271 287 9.5E-33 T 14-10-2018 DB29_03817 5ce9ff59f504bd9bea528ad97ccbdcac 473 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 299 321 9.5E-33 T 14-10-2018 DB29_04292 f649cfa1f19c4b5bb655c09db100361f 321 Gene3D G3DSA:1.10.10.10 1 57 1.2E-20 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_04292 f649cfa1f19c4b5bb655c09db100361f 321 Hamap MF_00978 Bifunctional ligase/repressor BirA [birA]. 2 320 34.841 T 14-10-2018 IPR030855 Bifunctional ligase/repressor BirA GO:0004077|GO:0006355 KEGG: 00780+6.3.4.15 DB29_04292 f649cfa1f19c4b5bb655c09db100361f 321 Pfam PF02237 Biotin protein ligase C terminal domain 281 319 4.9E-6 T 14-10-2018 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 DB29_04292 f649cfa1f19c4b5bb655c09db100361f 321 Pfam PF08279 HTH domain 4 54 1.1E-13 T 14-10-2018 IPR013196 Helix-turn-helix, type 11 DB29_04292 f649cfa1f19c4b5bb655c09db100361f 321 Gene3D G3DSA:2.30.30.100 275 319 6.1E-7 T 14-10-2018 DB29_04292 f649cfa1f19c4b5bb655c09db100361f 321 Pfam PF03099 Biotin/lipoate A/B protein ligase family 97 208 2.1E-14 T 14-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 DB29_04292 f649cfa1f19c4b5bb655c09db100361f 321 SUPERFAMILY SSF46785 4 55 1.07E-10 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_04292 f649cfa1f19c4b5bb655c09db100361f 321 SUPERFAMILY SSF55681 68 271 4.6E-58 T 14-10-2018 DB29_04292 f649cfa1f19c4b5bb655c09db100361f 321 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 80 319 1.8E-59 T 14-10-2018 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 DB29_04292 f649cfa1f19c4b5bb655c09db100361f 321 Gene3D G3DSA:3.30.930.10 62 272 7.1E-65 T 14-10-2018 DB29_01159 c222355cd44b0442aac7cbeba4bf4f6c 109 SUPERFAMILY SSF46785 8 102 7.8E-24 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_01159 c222355cd44b0442aac7cbeba4bf4f6c 109 SMART SM00418 9 91 2.2E-18 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DB29_01159 c222355cd44b0442aac7cbeba4bf4f6c 109 Pfam PF12840 Helix-turn-helix domain 9 68 6.1E-13 T 14-10-2018 DB29_01159 c222355cd44b0442aac7cbeba4bf4f6c 109 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 59 74 2.2E-9 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DB29_01159 c222355cd44b0442aac7cbeba4bf4f6c 109 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 11 26 2.2E-9 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DB29_01159 c222355cd44b0442aac7cbeba4bf4f6c 109 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 44 59 2.2E-9 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DB29_01159 c222355cd44b0442aac7cbeba4bf4f6c 109 Gene3D G3DSA:1.10.10.10 1 109 2.5E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_00079 95f8764c7d9a0a6882e1f6c3c16171b4 181 Gene3D G3DSA:4.10.810.10 127 181 2.1E-14 T 14-10-2018 IPR027393 Virus scaffolding protein, C-terminal GO:0005515 DB29_00079 95f8764c7d9a0a6882e1f6c3c16171b4 181 PIRSF PIRSF007165 1 181 3.6E-64 T 14-10-2018 IPR011188 Uncharacterised protein family UPF0302 DB29_00079 95f8764c7d9a0a6882e1f6c3c16171b4 181 Gene3D G3DSA:1.20.1440.290 1 123 1.9E-47 T 14-10-2018 IPR038091 UPF0302, N-terminal domain superfamily DB29_00079 95f8764c7d9a0a6882e1f6c3c16171b4 181 Pfam PF08864 UPF0302 domain 9 113 5.4E-43 T 14-10-2018 IPR014963 Uncharacterised domain UPF0302, N-terminal DB29_00079 95f8764c7d9a0a6882e1f6c3c16171b4 181 SMART SM00914 139 175 4.9E-14 T 14-10-2018 IPR014957 IDEAL domain DB29_00079 95f8764c7d9a0a6882e1f6c3c16171b4 181 Hamap MF_00760 UPF0302 protein . 2 178 27.487 T 14-10-2018 IPR011188 Uncharacterised protein family UPF0302 DB29_00079 95f8764c7d9a0a6882e1f6c3c16171b4 181 Pfam PF08858 IDEAL domain 139 175 3.5E-14 T 14-10-2018 IPR014957 IDEAL domain DB29_01871 0a3e7d437c2cda240dec3568f1308e7d 261 SUPERFAMILY SSF55120 1 252 1.14E-84 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 DB29_01871 0a3e7d437c2cda240dec3568f1308e7d 261 Pfam PF01416 tRNA pseudouridine synthase 144 245 1.1E-28 T 14-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 DB29_01871 0a3e7d437c2cda240dec3568f1308e7d 261 Pfam PF01416 tRNA pseudouridine synthase 9 104 3.8E-11 T 14-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 DB29_01871 0a3e7d437c2cda240dec3568f1308e7d 261 Gene3D G3DSA:3.30.70.580 1 106 2.5E-35 T 14-10-2018 DB29_01871 0a3e7d437c2cda240dec3568f1308e7d 261 Gene3D G3DSA:3.30.70.660 107 244 5.1E-49 T 14-10-2018 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0003723|GO:0009982 DB29_01871 0a3e7d437c2cda240dec3568f1308e7d 261 PIRSF PIRSF001430 1 260 2.5E-82 T 14-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 DB29_01871 0a3e7d437c2cda240dec3568f1308e7d 261 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 2 245 36.165 T 14-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 DB29_01871 0a3e7d437c2cda240dec3568f1308e7d 261 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 3 240 2.7E-69 T 14-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 DB29_01856 341c69a6f58156ec9eccbc93ecd065ca 145 Pfam PF06713 Bacterial PH domain 65 138 3.8E-26 T 14-10-2018 IPR009589 Sublancin immunity protein SunI GO:0030153 DB29_00655 9658cbf0741c61cd998dd3b2ac308dbb 98 Pfam PF14278 Transcriptional regulator C-terminal region 3 66 8.9E-10 T 14-10-2018 IPR039532 Transcriptional regulator TetR, C-terminal, Firmicutes type DB29_00655 9658cbf0741c61cd998dd3b2ac308dbb 98 Gene3D G3DSA:1.10.357.10 1 92 2.8E-10 T 14-10-2018 DB29_02778 39bc133041f2b79a3d2769e69c5c98c5 303 Gene3D G3DSA:1.10.3470.10 2 301 1.5E-78 T 14-10-2018 IPR037294 ABC transporter, BtuC-like DB29_02778 39bc133041f2b79a3d2769e69c5c98c5 303 SUPERFAMILY SSF81345 13 293 6.41E-71 T 14-10-2018 IPR037294 ABC transporter, BtuC-like DB29_02778 39bc133041f2b79a3d2769e69c5c98c5 303 Pfam PF01032 FecCD transport family 2 293 2.9E-78 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 DB29_01733 b9779424d0a79f5269a31245541c3543 472 SUPERFAMILY SSF53720 4 470 1.44E-163 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 DB29_01733 b9779424d0a79f5269a31245541c3543 472 Gene3D G3DSA:3.40.605.10 14 463 3.4E-175 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 DB29_01733 b9779424d0a79f5269a31245541c3543 472 PIRSF PIRSF036492 24 471 9.3E-84 T 14-10-2018 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0006081|GO:0055114 DB29_01733 b9779424d0a79f5269a31245541c3543 472 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 272 283 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 DB29_01733 b9779424d0a79f5269a31245541c3543 472 Pfam PF00171 Aldehyde dehydrogenase family 16 467 3.5E-166 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 DB29_01733 b9779424d0a79f5269a31245541c3543 472 Gene3D G3DSA:3.40.309.10 251 440 3.4E-175 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 DB29_03513 70de571d80c1c180182bf4d35737b309 462 Hamap MF_00006 Argininosuccinate lyase [argH]. 3 454 44.238 T 14-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 DB29_03513 70de571d80c1c180182bf4d35737b309 462 Gene3D G3DSA:1.20.200.10 120 446 6.3E-195 T 14-10-2018 DB29_03513 70de571d80c1c180182bf4d35737b309 462 Pfam PF14698 Argininosuccinate lyase C-terminal 364 431 3.8E-23 T 14-10-2018 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 DB29_03513 70de571d80c1c180182bf4d35737b309 462 Gene3D G3DSA:1.10.40.30 361 433 6.3E-195 T 14-10-2018 DB29_03513 70de571d80c1c180182bf4d35737b309 462 PRINTS PR00145 Argininosuccinate lyase family signature 194 210 1.4E-68 T 14-10-2018 DB29_03513 70de571d80c1c180182bf4d35737b309 462 PRINTS PR00145 Argininosuccinate lyase family signature 276 292 1.4E-68 T 14-10-2018 DB29_03513 70de571d80c1c180182bf4d35737b309 462 PRINTS PR00145 Argininosuccinate lyase family signature 102 124 1.4E-68 T 14-10-2018 DB29_03513 70de571d80c1c180182bf4d35737b309 462 PRINTS PR00145 Argininosuccinate lyase family signature 311 330 1.4E-68 T 14-10-2018 DB29_03513 70de571d80c1c180182bf4d35737b309 462 PRINTS PR00145 Argininosuccinate lyase family signature 232 256 1.4E-68 T 14-10-2018 DB29_03513 70de571d80c1c180182bf4d35737b309 462 PRINTS PR00145 Argininosuccinate lyase family signature 143 163 1.4E-68 T 14-10-2018 DB29_03513 70de571d80c1c180182bf4d35737b309 462 TIGRFAM TIGR00838 argH: argininosuccinate lyase 4 453 9.0E-206 T 14-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 DB29_03513 70de571d80c1c180182bf4d35737b309 462 Gene3D G3DSA:1.10.275.10 26 230 6.3E-195 T 14-10-2018 IPR024083 Fumarase/histidase, N-terminal DB29_03513 70de571d80c1c180182bf4d35737b309 462 PRINTS PR00149 Fumarate lyase superfamily signature 276 292 2.7E-30 T 14-10-2018 IPR000362 Fumarate lyase family DB29_03513 70de571d80c1c180182bf4d35737b309 462 PRINTS PR00149 Fumarate lyase superfamily signature 232 259 2.7E-30 T 14-10-2018 IPR000362 Fumarate lyase family DB29_03513 70de571d80c1c180182bf4d35737b309 462 PRINTS PR00149 Fumarate lyase superfamily signature 148 166 2.7E-30 T 14-10-2018 IPR000362 Fumarate lyase family DB29_03513 70de571d80c1c180182bf4d35737b309 462 PRINTS PR00149 Fumarate lyase superfamily signature 103 121 2.7E-30 T 14-10-2018 IPR000362 Fumarate lyase family DB29_03513 70de571d80c1c180182bf4d35737b309 462 SUPERFAMILY SSF48557 4 456 9.58E-151 T 14-10-2018 IPR008948 L-Aspartase-like GO:0003824 DB29_03513 70de571d80c1c180182bf4d35737b309 462 ProSitePatterns PS00163 Fumarate lyases signature. 276 285 - T 14-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 DB29_03513 70de571d80c1c180182bf4d35737b309 462 Pfam PF00206 Lyase 7 301 2.9E-77 T 14-10-2018 IPR022761 Fumarate lyase, N-terminal DB29_03507 b3a7b0cbe078ec63c5be7e824fc33182 164 Pfam PF08534 Redoxin 18 158 7.3E-25 T 14-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 DB29_03507 b3a7b0cbe078ec63c5be7e824fc33182 164 Hamap MF_00269 Thiol peroxidase [tpx]. 2 162 38.606 T 14-10-2018 IPR002065 Thiol peroxidase Tpx GO:0008379|GO:0016209|GO:0055114 KEGG: 00480+1.11.1.15 DB29_03507 b3a7b0cbe078ec63c5be7e824fc33182 164 SUPERFAMILY SSF52833 2 159 3.8E-45 T 14-10-2018 IPR036249 Thioredoxin-like superfamily DB29_03507 b3a7b0cbe078ec63c5be7e824fc33182 164 Gene3D G3DSA:3.40.30.10 1 163 8.8E-51 T 14-10-2018 DB29_03507 b3a7b0cbe078ec63c5be7e824fc33182 164 ProSitePatterns PS01265 Tpx family signature. 82 93 - T 14-10-2018 IPR018219 Thiol peroxidase conserved site GO:0016684|GO:0055114 KEGG: 00480+1.11.1.15 DB29_01586 116385ac12f5cbfe8961e3a1ad638580 397 SMART SM00304 39 91 3.4E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DB29_01586 116385ac12f5cbfe8961e3a1ad638580 397 Pfam PF00672 HAMP domain 45 87 1.5E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DB29_01586 116385ac12f5cbfe8961e3a1ad638580 397 Gene3D G3DSA:1.10.287.950 92 395 4.1E-53 T 14-10-2018 DB29_01586 116385ac12f5cbfe8961e3a1ad638580 397 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 183 341 5.0E-33 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DB29_01586 116385ac12f5cbfe8961e3a1ad638580 397 Gene3D G3DSA:1.20.1480.50 2 91 3.1E-10 T 14-10-2018 DB29_01586 116385ac12f5cbfe8961e3a1ad638580 397 SUPERFAMILY SSF58104 61 393 3.92E-59 T 14-10-2018 DB29_01586 116385ac12f5cbfe8961e3a1ad638580 397 SMART SM00283 120 381 2.5E-41 T 14-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 DB29_01162 090805d0b3a00de195390c60ce02fb72 235 Pfam PF00175 Oxidoreductase NAD-binding domain 119 214 5.8E-9 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 DB29_01162 090805d0b3a00de195390c60ce02fb72 235 Gene3D G3DSA:2.40.30.10 19 110 5.2E-14 T 14-10-2018 DB29_01162 090805d0b3a00de195390c60ce02fb72 235 Gene3D G3DSA:3.40.50.80 111 232 3.2E-22 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain DB29_01162 090805d0b3a00de195390c60ce02fb72 235 SUPERFAMILY SSF52343 100 228 1.22E-22 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain DB29_01162 090805d0b3a00de195390c60ce02fb72 235 SUPERFAMILY SSF63380 14 111 4.66E-13 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel DB29_01162 090805d0b3a00de195390c60ce02fb72 235 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 61 68 1.8E-5 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 DB29_01162 090805d0b3a00de195390c60ce02fb72 235 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 118 137 1.8E-5 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 DB29_01162 090805d0b3a00de195390c60ce02fb72 235 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 156 167 1.8E-5 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 DB29_01162 090805d0b3a00de195390c60ce02fb72 235 Pfam PF08022 FAD-binding domain 26 107 1.1E-4 T 14-10-2018 IPR013112 FAD-binding 8 GO:0016491|GO:0055114 DB29_01338 47bfeb035a2cfa6bb03b8238c1eb4d0d 425 Pfam PF13416 Bacterial extracellular solute-binding protein 54 357 4.8E-37 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein DB29_01338 47bfeb035a2cfa6bb03b8238c1eb4d0d 425 Gene3D G3DSA:3.40.190.10 21 422 1.6E-82 T 14-10-2018 DB29_01338 47bfeb035a2cfa6bb03b8238c1eb4d0d 425 SUPERFAMILY SSF53850 20 424 8.89E-72 T 14-10-2018 DB29_02970 536d13b73ba75d1a1c56333ce06957b3 82 Pfam PF04226 Transglycosylase associated protein 33 78 2.0E-10 T 14-10-2018 IPR007341 Transglycosylase-associated protein GO:0016021 DB29_03423 89087f968405db222d0b2ce8f33daf53 160 PRINTS PR00502 NUDIX hydrolase family signature 49 63 6.4E-7 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 DB29_03423 89087f968405db222d0b2ce8f33daf53 160 PRINTS PR00502 NUDIX hydrolase family signature 63 78 6.4E-7 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 DB29_03423 89087f968405db222d0b2ce8f33daf53 160 Pfam PF00293 NUDIX domain 26 88 4.8E-12 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 DB29_03423 89087f968405db222d0b2ce8f33daf53 160 Gene3D G3DSA:3.90.79.10 1 159 1.4E-38 T 14-10-2018 DB29_03423 89087f968405db222d0b2ce8f33daf53 160 SUPERFAMILY SSF55811 28 112 7.58E-19 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 DB29_03423 89087f968405db222d0b2ce8f33daf53 160 ProSitePatterns PS00893 Nudix box signature. 54 75 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 DB29_03423 89087f968405db222d0b2ce8f33daf53 160 TIGRFAM TIGR02705 nudix_YtkD: nucleoside triphosphatase YtkD 3 158 2.0E-69 T 14-10-2018 IPR014078 Nucleoside triphosphatase YtkD MetaCyc: PWY-6502 DB29_01690 2832602a9aa121e30102121b7d88fe7e 307 Gene3D G3DSA:3.20.20.150 1 285 3.2E-55 T 14-10-2018 DB29_01690 2832602a9aa121e30102121b7d88fe7e 307 Pfam PF01261 Xylose isomerase-like TIM barrel 25 223 1.3E-23 T 14-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain DB29_01690 2832602a9aa121e30102121b7d88fe7e 307 SUPERFAMILY SSF51658 4 288 3.45E-44 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily DB29_00448 4d212a2cf46a53122449efb5c7094df1 146 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 2 145 5.5E-56 T 14-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 DB29_00448 4d212a2cf46a53122449efb5c7094df1 146 SUPERFAMILY SSF69500 1 144 1.44E-55 T 14-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily DB29_00448 4d212a2cf46a53122449efb5c7094df1 146 Gene3D G3DSA:3.50.80.10 1 146 7.8E-56 T 14-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily DB29_00448 4d212a2cf46a53122449efb5c7094df1 146 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 2 144 3.9E-55 T 14-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 DB29_00448 4d212a2cf46a53122449efb5c7094df1 146 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 145 34.063 T 14-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 DB29_04033 87d79de8bc1ee8b50f104129f333a970 254 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 19 246 2.7E-32 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 DB29_04033 87d79de8bc1ee8b50f104129f333a970 254 PRINTS PR00046 Major sigma-70 factor signature 217 232 1.5E-8 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DB29_04033 87d79de8bc1ee8b50f104129f333a970 254 PRINTS PR00046 Major sigma-70 factor signature 74 82 1.5E-8 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DB29_04033 87d79de8bc1ee8b50f104129f333a970 254 PRINTS PR00046 Major sigma-70 factor signature 200 212 1.5E-8 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DB29_04033 87d79de8bc1ee8b50f104129f333a970 254 PRINTS PR00046 Major sigma-70 factor signature 50 63 1.5E-8 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DB29_04033 87d79de8bc1ee8b50f104129f333a970 254 PRINTS PR00046 Major sigma-70 factor signature 232 243 1.5E-8 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DB29_04033 87d79de8bc1ee8b50f104129f333a970 254 Gene3D G3DSA:1.20.140.160 94 250 1.4E-38 T 14-10-2018 DB29_04033 87d79de8bc1ee8b50f104129f333a970 254 Gene3D G3DSA:1.10.1740.10 9 92 2.5E-24 T 14-10-2018 DB29_04033 87d79de8bc1ee8b50f104129f333a970 254 Pfam PF04542 Sigma-70 region 2 23 95 1.7E-11 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 DB29_04033 87d79de8bc1ee8b50f104129f333a970 254 Pfam PF04545 Sigma-70, region 4 197 245 4.5E-16 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 DB29_04033 87d79de8bc1ee8b50f104129f333a970 254 SUPERFAMILY SSF88659 96 162 1.26E-11 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like DB29_04033 87d79de8bc1ee8b50f104129f333a970 254 PIRSF PIRSF000770 1 254 2.2E-36 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DB29_04033 87d79de8bc1ee8b50f104129f333a970 254 SUPERFAMILY SSF88659 165 249 7.1E-19 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like DB29_04033 87d79de8bc1ee8b50f104129f333a970 254 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 23 247 2.2E-69 T 14-10-2018 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 DB29_04033 87d79de8bc1ee8b50f104129f333a970 254 Pfam PF04539 Sigma-70 region 3 103 158 2.4E-7 T 14-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 DB29_04033 87d79de8bc1ee8b50f104129f333a970 254 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 217 243 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DB29_04033 87d79de8bc1ee8b50f104129f333a970 254 SUPERFAMILY SSF88946 3 95 1.49E-21 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 DB29_04008 06120cd0936823e6b06d4450fe015f15 527 PRINTS PR01009 Flagellar M-ring protein signature 346 370 2.0E-21 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 DB29_04008 06120cd0936823e6b06d4450fe015f15 527 PRINTS PR01009 Flagellar M-ring protein signature 122 140 2.0E-21 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 DB29_04008 06120cd0936823e6b06d4450fe015f15 527 PRINTS PR01009 Flagellar M-ring protein signature 154 168 2.0E-21 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 DB29_04008 06120cd0936823e6b06d4450fe015f15 527 PRINTS PR01009 Flagellar M-ring protein signature 198 216 2.0E-21 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 DB29_04008 06120cd0936823e6b06d4450fe015f15 527 PRINTS PR01009 Flagellar M-ring protein signature 269 287 2.0E-21 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 DB29_04008 06120cd0936823e6b06d4450fe015f15 527 PIRSF PIRSF004862 1 527 4.6E-155 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 DB29_04008 06120cd0936823e6b06d4450fe015f15 527 Pfam PF08345 Flagellar M-ring protein C-terminal 256 424 1.9E-29 T 14-10-2018 IPR013556 Flagellar M-ring C-terminal DB29_04008 06120cd0936823e6b06d4450fe015f15 527 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 1 526 2.4E-107 T 14-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 DB29_04008 06120cd0936823e6b06d4450fe015f15 527 Pfam PF01514 Secretory protein of YscJ/FliF family 31 220 3.7E-56 T 14-10-2018 IPR006182 Secretory protein YscJ/FliF DB29_04008 06120cd0936823e6b06d4450fe015f15 527 Gene3D G3DSA:3.30.300.30 133 219 1.7E-6 T 14-10-2018 DB29_04048 24d967c049d8b947da5fdc19a875c381 102 Gene3D G3DSA:3.30.1330.30 2 102 8.3E-36 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like DB29_04048 24d967c049d8b947da5fdc19a875c381 102 SUPERFAMILY SSF55315 5 99 3.14E-25 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like DB29_04048 24d967c049d8b947da5fdc19a875c381 102 Pfam PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 6 95 7.2E-17 T 14-10-2018 IPR004038 Ribosomal protein L7Ae/L30e/S12e/Gadd45 DB29_00862 7808c9187166f7c69b233d87b6e2c0b6 407 Gene3D G3DSA:1.20.1250.20 4 183 9.2E-19 T 14-10-2018 DB29_00862 7808c9187166f7c69b233d87b6e2c0b6 407 Pfam PF07690 Major Facilitator Superfamily 9 327 1.2E-22 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DB29_00862 7808c9187166f7c69b233d87b6e2c0b6 407 SUPERFAMILY SSF103473 2 390 4.58E-45 T 14-10-2018 IPR036259 MFS transporter superfamily DB29_00862 7808c9187166f7c69b233d87b6e2c0b6 407 Gene3D G3DSA:1.20.1250.20 207 388 3.2E-28 T 14-10-2018 DB29_04350 c8fce65cccfd9de71fe270d354b4676a 400 Gene3D G3DSA:1.25.40.10 238 400 1.3E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DB29_04350 c8fce65cccfd9de71fe270d354b4676a 400 SUPERFAMILY SSF48452 283 385 3.79E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DB29_04350 c8fce65cccfd9de71fe270d354b4676a 400 SUPERFAMILY SSF53098 95 269 2.95E-28 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily DB29_04350 c8fce65cccfd9de71fe270d354b4676a 400 Pfam PF13482 RNase_H superfamily 96 266 1.1E-40 T 14-10-2018 IPR038720 YprB, ribonuclease H-like domain DB29_03828 33ba96c6bf917715e77139dc27502ed9 340 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 6 324 1.7E-79 T 14-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 DB29_03828 33ba96c6bf917715e77139dc27502ed9 340 Gene3D G3DSA:3.20.20.70 2 340 2.8E-120 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DB29_03828 33ba96c6bf917715e77139dc27502ed9 340 SUPERFAMILY SSF51395 2 336 6.41E-110 T 14-10-2018 DB29_02558 4a58d289bdd332536b8f7da6a8a5c0f5 307 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 120 301 2.8E-28 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DB29_02558 4a58d289bdd332536b8f7da6a8a5c0f5 307 SUPERFAMILY SSF161098 97 288 1.7E-27 T 14-10-2018 IPR035906 MetI-like superfamily DB29_02558 4a58d289bdd332536b8f7da6a8a5c0f5 307 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 26 73 7.3E-10 T 14-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain DB29_02558 4a58d289bdd332536b8f7da6a8a5c0f5 307 Gene3D G3DSA:1.10.3720.10 91 304 2.9E-22 T 14-10-2018 IPR035906 MetI-like superfamily DB29_03523 cf1f7519ac154921fd6cb219358dab60 309 SUPERFAMILY SSF64182 12 301 5.89E-72 T 14-10-2018 IPR038763 DHH phosphoesterase superfamily DB29_03523 cf1f7519ac154921fd6cb219358dab60 309 Pfam PF01368 DHH family 15 151 2.1E-12 T 14-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 DB29_03523 cf1f7519ac154921fd6cb219358dab60 309 Gene3D G3DSA:3.90.1640.10 1 195 4.5E-58 T 14-10-2018 DB29_03523 cf1f7519ac154921fd6cb219358dab60 309 Pfam PF02272 DHHA1 domain 176 307 2.8E-13 T 14-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 DB29_03523 cf1f7519ac154921fd6cb219358dab60 309 Gene3D G3DSA:3.10.310.30 197 309 1.2E-33 T 14-10-2018 DB29_01237 9a85537e3d278f067696852bf78ad0c0 374 TIGRFAM TIGR00518 alaDH: alanine dehydrogenase 1 371 3.7E-179 T 14-10-2018 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 DB29_01237 9a85537e3d278f067696852bf78ad0c0 374 ProSitePatterns PS00837 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 2. 172 197 - T 14-10-2018 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 GO:0016491|GO:0055114 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|Reactome: R-HSA-71403 DB29_01237 9a85537e3d278f067696852bf78ad0c0 374 SUPERFAMILY SSF52283 1 360 1.53E-65 T 14-10-2018 DB29_01237 9a85537e3d278f067696852bf78ad0c0 374 PIRSF PIRSF000183 1 371 2.9E-182 T 14-10-2018 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 DB29_01237 9a85537e3d278f067696852bf78ad0c0 374 Gene3D G3DSA:3.40.50.720 3 353 9.9E-137 T 14-10-2018 DB29_01237 9a85537e3d278f067696852bf78ad0c0 374 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 140 352 1.8E-78 T 14-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain DB29_01237 9a85537e3d278f067696852bf78ad0c0 374 Gene3D G3DSA:3.40.50.720 129 305 9.9E-137 T 14-10-2018 DB29_01237 9a85537e3d278f067696852bf78ad0c0 374 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 136 2.0E-47 T 14-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal DB29_01237 9a85537e3d278f067696852bf78ad0c0 374 SMART SM01003 4 136 1.2E-75 T 14-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal DB29_01237 9a85537e3d278f067696852bf78ad0c0 374 SUPERFAMILY SSF51735 136 303 8.62E-46 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_01237 9a85537e3d278f067696852bf78ad0c0 374 SMART SM01002 148 297 3.9E-82 T 14-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain DB29_01500 edd3aa6cc7f1e8ac5f83b39dd651a98c 256 TIGRFAM TIGR01093 aroD: 3-dehydroquinate dehydratase, type I 18 245 1.2E-61 T 14-10-2018 IPR001381 3-dehydroquinate dehydratase type I GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 DB29_01500 edd3aa6cc7f1e8ac5f83b39dd651a98c 256 Pfam PF01487 Type I 3-dehydroquinase 19 246 1.0E-67 T 14-10-2018 IPR001381 3-dehydroquinate dehydratase type I GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 DB29_01500 edd3aa6cc7f1e8ac5f83b39dd651a98c 256 Gene3D G3DSA:3.20.20.70 10 254 2.3E-85 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DB29_01500 edd3aa6cc7f1e8ac5f83b39dd651a98c 256 SUPERFAMILY SSF51569 12 250 8.06E-69 T 14-10-2018 DB29_01500 edd3aa6cc7f1e8ac5f83b39dd651a98c 256 Hamap MF_00214 3-dehydroquinate dehydratase [aroD]. 17 249 31.432 T 14-10-2018 IPR001381 3-dehydroquinate dehydratase type I GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 DB29_00017 29f86bf964c60737f252868e76988d99 286 SUPERFAMILY SSF46689 57 114 8.51E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DB29_00017 29f86bf964c60737f252868e76988d99 286 Pfam PF12833 Helix-turn-helix domain 27 105 4.0E-21 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DB29_00017 29f86bf964c60737f252868e76988d99 286 Pfam PF06445 GyrI-like small molecule binding domain 128 285 3.9E-27 T 14-10-2018 IPR029442 GyrI-like small molecule binding domain DB29_00017 29f86bf964c60737f252868e76988d99 286 SUPERFAMILY SSF55136 128 286 2.25E-31 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily DB29_00017 29f86bf964c60737f252868e76988d99 286 SMART SM00871 128 285 6.1E-37 T 14-10-2018 IPR010499 Bacterial transcription activator, effector binding DB29_00017 29f86bf964c60737f252868e76988d99 286 SMART SM00342 21 104 6.6E-28 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DB29_00017 29f86bf964c60737f252868e76988d99 286 Gene3D G3DSA:3.20.80.10 128 286 8.1E-50 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily DB29_00017 29f86bf964c60737f252868e76988d99 286 Gene3D G3DSA:1.10.10.60 2 57 1.3E-17 T 14-10-2018 DB29_00017 29f86bf964c60737f252868e76988d99 286 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 58 100 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 DB29_00017 29f86bf964c60737f252868e76988d99 286 Gene3D G3DSA:1.10.10.60 58 117 5.2E-14 T 14-10-2018 DB29_00017 29f86bf964c60737f252868e76988d99 286 SUPERFAMILY SSF46689 5 55 4.93E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DB29_00017 29f86bf964c60737f252868e76988d99 286 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 88 104 7.1E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DB29_00017 29f86bf964c60737f252868e76988d99 286 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 73 88 7.1E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DB29_03595 a654a2533090818cd24e118be3d0ffa5 154 PRINTS PR00598 Bacterial regulatory protein MarR family signature 73 88 1.1E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DB29_03595 a654a2533090818cd24e118be3d0ffa5 154 PRINTS PR00598 Bacterial regulatory protein MarR family signature 92 108 1.1E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DB29_03595 a654a2533090818cd24e118be3d0ffa5 154 PRINTS PR00598 Bacterial regulatory protein MarR family signature 122 142 1.1E-7 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DB29_03595 a654a2533090818cd24e118be3d0ffa5 154 SMART SM00347 32 132 1.4E-25 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DB29_03595 a654a2533090818cd24e118be3d0ffa5 154 SUPERFAMILY SSF46785 7 148 2.37E-31 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_03595 a654a2533090818cd24e118be3d0ffa5 154 Gene3D G3DSA:1.10.10.10 2 148 2.7E-36 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_03595 a654a2533090818cd24e118be3d0ffa5 154 Pfam PF01047 MarR family 39 97 5.5E-19 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DB29_03585 cb6feb4134c7a3e63626e277d8608231 594 SUPERFAMILY SSF47781 497 591 1.02E-22 T 14-10-2018 IPR010994 RuvA domain 2-like DB29_03585 cb6feb4134c7a3e63626e277d8608231 594 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 373 523 3.8E-54 T 14-10-2018 IPR001162 UvrC family homology region DB29_03585 cb6feb4134c7a3e63626e277d8608231 594 Pfam PF02151 UvrB/uvrC motif 200 230 5.9E-8 T 14-10-2018 IPR001943 UVR domain GO:0005515 DB29_03585 cb6feb4134c7a3e63626e277d8608231 594 SUPERFAMILY SSF82771 14 97 1.96E-21 T 14-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 DB29_03585 cb6feb4134c7a3e63626e277d8608231 594 SMART SM00465 15 95 5.4E-23 T 14-10-2018 IPR000305 GIY-YIG endonuclease DB29_03585 cb6feb4134c7a3e63626e277d8608231 594 Hamap MF_00203 UvrABC system protein C [uvrC]. 2 586 28.232 T 14-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 DB29_03585 cb6feb4134c7a3e63626e277d8608231 594 Pfam PF14520 Helix-hairpin-helix domain 539 583 3.1E-6 T 14-10-2018 DB29_03585 cb6feb4134c7a3e63626e277d8608231 594 Gene3D G3DSA:3.30.420.340 365 523 9.2E-60 T 14-10-2018 IPR038476 UvrC homology region 2 superfamily DB29_03585 cb6feb4134c7a3e63626e277d8608231 594 SUPERFAMILY SSF46600 183 235 8.37E-13 T 14-10-2018 IPR036876 UVR domain superfamily DB29_03585 cb6feb4134c7a3e63626e277d8608231 594 Pfam PF01541 GIY-YIG catalytic domain 16 90 3.8E-9 T 14-10-2018 IPR000305 GIY-YIG endonuclease DB29_03585 cb6feb4134c7a3e63626e277d8608231 594 Gene3D G3DSA:1.10.150.20 527 588 5.8E-22 T 14-10-2018 DB29_03585 cb6feb4134c7a3e63626e277d8608231 594 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 7 570 3.1E-213 T 14-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 DB29_03585 cb6feb4134c7a3e63626e277d8608231 594 Gene3D G3DSA:3.40.1440.10 1 99 5.5E-37 T 14-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 DB29_00096 6ca9e7b0672fabc3ea69e48196dcf22f 323 Pfam PF00348 Polyprenyl synthetase 30 274 2.5E-65 T 14-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 DB29_00096 6ca9e7b0672fabc3ea69e48196dcf22f 323 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 203 215 - T 14-10-2018 IPR033749 Polyprenyl synthetase, conserved site DB29_00096 6ca9e7b0672fabc3ea69e48196dcf22f 323 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 81 95 - T 14-10-2018 IPR033749 Polyprenyl synthetase, conserved site DB29_00096 6ca9e7b0672fabc3ea69e48196dcf22f 323 TIGRFAM TIGR02748 GerC3_HepT: heptaprenyl diphosphate synthase component II 2 323 9.4E-166 T 14-10-2018 IPR014119 Heptaprenyl diphosphate synthase component II KEGG: 00900+2.5.1.30|MetaCyc: PWY-5807 DB29_00096 6ca9e7b0672fabc3ea69e48196dcf22f 323 SUPERFAMILY SSF48576 4 322 3.04E-80 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily DB29_00096 6ca9e7b0672fabc3ea69e48196dcf22f 323 Gene3D G3DSA:1.10.600.10 7 323 4.4E-94 T 14-10-2018 IPR008949 Isoprenoid synthase domain superfamily DB29_03972 422a1f74734bc917e712883848b5f4d4 317 Pfam PF00698 Acyl transferase domain 6 281 3.7E-48 T 14-10-2018 IPR014043 Acyl transferase DB29_03972 422a1f74734bc917e712883848b5f4d4 317 Gene3D G3DSA:3.40.366.10 6 286 4.4E-99 T 14-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 DB29_03972 422a1f74734bc917e712883848b5f4d4 317 SUPERFAMILY SSF52151 4 309 1.12E-78 T 14-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase DB29_03972 422a1f74734bc917e712883848b5f4d4 317 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 3 291 3.1E-110 T 14-10-2018 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 DB29_03972 422a1f74734bc917e712883848b5f4d4 317 PIRSF PIRSF000446 1 311 5.5E-112 T 14-10-2018 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 DB29_03972 422a1f74734bc917e712883848b5f4d4 317 SUPERFAMILY SSF55048 127 197 1.23E-14 T 14-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding DB29_03972 422a1f74734bc917e712883848b5f4d4 317 Gene3D G3DSA:3.30.70.250 124 197 4.4E-99 T 14-10-2018 DB29_03972 422a1f74734bc917e712883848b5f4d4 317 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 7 314 2.8E-58 T 14-10-2018 IPR020801 Polyketide synthase, acyl transferase domain DB29_01427 b6318dff24f9a34159d6cf1767b41f74 255 Gene3D G3DSA:1.10.3720.10 53 243 3.2E-25 T 14-10-2018 IPR035906 MetI-like superfamily DB29_01427 b6318dff24f9a34159d6cf1767b41f74 255 SUPERFAMILY SSF161098 53 234 2.75E-34 T 14-10-2018 IPR035906 MetI-like superfamily DB29_01427 b6318dff24f9a34159d6cf1767b41f74 255 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 75 246 4.1E-24 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DB29_01693 c7e76cf4cfd9af8f45b98569478f4b69 315 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 102 309 2.1E-14 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DB29_01693 c7e76cf4cfd9af8f45b98569478f4b69 315 SUPERFAMILY SSF161098 72 300 5.23E-50 T 14-10-2018 IPR035906 MetI-like superfamily DB29_01693 c7e76cf4cfd9af8f45b98569478f4b69 315 Gene3D G3DSA:1.10.3720.10 68 315 4.0E-59 T 14-10-2018 IPR035906 MetI-like superfamily DB29_00696 6b737d81dad946667e066a10114b584d 445 PIRSF PIRSF006446 1 444 3.4E-106 T 14-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 DB29_00696 6b737d81dad946667e066a10114b584d 445 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 6 436 2.6E-116 T 14-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 DB29_02666 2dc3ab91f4dbd62ed825d5446d81798c 237 Pfam PF01925 Sulfite exporter TauE/SafE 2 231 3.2E-26 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 DB29_03717 02b6e55769cc17c908ec6280254ea9b9 253 SUPERFAMILY SSF55797 129 251 4.97E-25 T 14-10-2018 IPR035940 CAP superfamily DB29_03717 02b6e55769cc17c908ec6280254ea9b9 253 Gene3D G3DSA:3.40.33.10 28 252 6.8E-60 T 14-10-2018 IPR035940 CAP superfamily DB29_03717 02b6e55769cc17c908ec6280254ea9b9 253 TIGRFAM TIGR02909 spore_YkwD: uncharacterized protein, YkwD family 128 252 3.2E-62 T 14-10-2018 IPR014258 CAP domain, YkwD-like DB29_03717 02b6e55769cc17c908ec6280254ea9b9 253 Pfam PF00188 Cysteine-rich secretory protein family 137 251 6.1E-19 T 14-10-2018 IPR014044 CAP domain DB29_01655 c6b82b912f0bd2c96d0200ba4ea59676 421 Gene3D G3DSA:3.40.190.10 28 420 7.7E-56 T 14-10-2018 DB29_01655 c6b82b912f0bd2c96d0200ba4ea59676 421 Pfam PF13416 Bacterial extracellular solute-binding protein 51 362 3.6E-23 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein DB29_01655 c6b82b912f0bd2c96d0200ba4ea59676 421 SUPERFAMILY SSF53850 34 413 1.63E-55 T 14-10-2018 DB29_00728 04109de2c792307161e950ebe16c4ef0 419 SMART SM00387 309 416 9.5E-27 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DB29_00728 04109de2c792307161e950ebe16c4ef0 419 Pfam PF00512 His Kinase A (phospho-acceptor) domain 205 263 2.1E-13 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DB29_00728 04109de2c792307161e950ebe16c4ef0 419 PRINTS PR00344 Bacterial sensor protein C-terminal signature 400 413 1.4E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB29_00728 04109de2c792307161e950ebe16c4ef0 419 PRINTS PR00344 Bacterial sensor protein C-terminal signature 376 394 1.4E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB29_00728 04109de2c792307161e950ebe16c4ef0 419 PRINTS PR00344 Bacterial sensor protein C-terminal signature 347 361 1.4E-10 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB29_00728 04109de2c792307161e950ebe16c4ef0 419 SMART SM00388 205 267 1.2E-11 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DB29_00728 04109de2c792307161e950ebe16c4ef0 419 SUPERFAMILY SSF47384 200 265 1.04E-11 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DB29_00728 04109de2c792307161e950ebe16c4ef0 419 Gene3D G3DSA:1.10.1760.20 29 191 3.5E-5 T 14-10-2018 DB29_00728 04109de2c792307161e950ebe16c4ef0 419 SUPERFAMILY SSF55874 269 414 1.31E-32 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB29_00728 04109de2c792307161e950ebe16c4ef0 419 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 310 414 3.5E-21 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DB29_00728 04109de2c792307161e950ebe16c4ef0 419 Gene3D G3DSA:1.10.287.130 208 264 1.8E-14 T 14-10-2018 DB29_00728 04109de2c792307161e950ebe16c4ef0 419 Gene3D G3DSA:3.30.565.10 266 418 2.1E-36 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB29_00728 04109de2c792307161e950ebe16c4ef0 419 Pfam PF07694 5TMR of 5TMR-LYT 26 152 2.1E-10 T 14-10-2018 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region GO:0000155|GO:0000160|GO:0004673|GO:0016021|GO:0071555 DB29_04011 bfec9b07638bda0d93e7da1b94b6c6a9 440 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 28 90 8.3E-7 T 14-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DB29_04011 bfec9b07638bda0d93e7da1b94b6c6a9 440 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 148 357 1.8E-78 T 14-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DB29_04011 bfec9b07638bda0d93e7da1b94b6c6a9 440 Gene3D G3DSA:3.40.50.12240 12 440 5.8E-151 T 14-10-2018 DB29_04011 bfec9b07638bda0d93e7da1b94b6c6a9 440 SUPERFAMILY SSF52540 94 363 2.19E-93 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_04011 bfec9b07638bda0d93e7da1b94b6c6a9 440 TIGRFAM TIGR03497 FliI_clade2: flagellar protein export ATPase FliI 21 436 1.8E-196 T 14-10-2018 IPR022425 Flagellar export ATPase FliI, clade 2 GO:0016887|GO:0044780|GO:0071973 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DB29_04011 bfec9b07638bda0d93e7da1b94b6c6a9 440 SMART SM00382 160 341 1.4E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_04011 bfec9b07638bda0d93e7da1b94b6c6a9 440 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 9 437 1.2E-184 T 14-10-2018 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DB29_04011 bfec9b07638bda0d93e7da1b94b6c6a9 440 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 348 357 - T 14-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 DB29_03065 73f014d2f1bf07facca2c76d2df5f2b0 297 SUPERFAMILY SSF160964 6 46 9.15E-5 T 14-10-2018 DB29_03065 73f014d2f1bf07facca2c76d2df5f2b0 297 Gene3D G3DSA:1.10.3720.10 49 296 3.6E-64 T 14-10-2018 IPR035906 MetI-like superfamily DB29_03065 73f014d2f1bf07facca2c76d2df5f2b0 297 SUPERFAMILY SSF161098 53 284 1.57E-54 T 14-10-2018 IPR035906 MetI-like superfamily DB29_03065 73f014d2f1bf07facca2c76d2df5f2b0 297 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 88 291 2.5E-18 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DB29_00412 1088be95b3b7afc63a2cd7252fa133fd 79 Pfam PF14143 YrhC-like protein 7 79 1.2E-6 T 14-10-2018 IPR025418 YrhC-like protein DB29_01846 c8259225b47bf488c832f3ef2ee6cd33 299 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 42 287 3.1E-15 T 14-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase DB29_01846 c8259225b47bf488c832f3ef2ee6cd33 299 SUPERFAMILY SSF56219 37 292 1.05E-41 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily DB29_01846 c8259225b47bf488c832f3ef2ee6cd33 299 Gene3D G3DSA:3.60.10.10 34 299 2.0E-91 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily DB29_02950 1a2a3aec88391e8725de242d8b2b8f4e 341 Gene3D G3DSA:3.30.70.360 133 248 9.9E-109 T 14-10-2018 DB29_02950 1a2a3aec88391e8725de242d8b2b8f4e 341 SUPERFAMILY SSF55031 133 250 3.49E-24 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain DB29_02950 1a2a3aec88391e8725de242d8b2b8f4e 341 SUPERFAMILY SSF53187 1 330 4.57E-53 T 14-10-2018 DB29_02950 1a2a3aec88391e8725de242d8b2b8f4e 341 TIGRFAM TIGR01879 hydantase: amidase, hydantoinase/carbamoylase family 1 329 2.6E-90 T 14-10-2018 IPR010158 Amidase, carbamoylase-type GO:0016813 DB29_02950 1a2a3aec88391e8725de242d8b2b8f4e 341 Pfam PF07687 Peptidase dimerisation domain 133 234 7.0E-5 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain DB29_02950 1a2a3aec88391e8725de242d8b2b8f4e 341 Pfam PF01546 Peptidase family M20/M25/M40 1 327 4.1E-25 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 DB29_02950 1a2a3aec88391e8725de242d8b2b8f4e 341 Gene3D G3DSA:3.40.630.10 1 323 9.9E-109 T 14-10-2018 DB29_00313 b703d73bde12030642e47fda2cbbfcf8 373 Gene3D G3DSA:1.10.10.10 301 373 1.3E-36 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_00313 b703d73bde12030642e47fda2cbbfcf8 373 Pfam PF03979 Sigma-70 factor, region 1.1 16 84 1.6E-15 T 14-10-2018 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 DB29_00313 b703d73bde12030642e47fda2cbbfcf8 373 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 164 177 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DB29_00313 b703d73bde12030642e47fda2cbbfcf8 373 Gene3D G3DSA:1.10.10.10 213 288 2.0E-34 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_00313 b703d73bde12030642e47fda2cbbfcf8 373 Gene3D G3DSA:1.10.220.120 15 73 1.6E-9 T 14-10-2018 DB29_00313 b703d73bde12030642e47fda2cbbfcf8 373 PRINTS PR00046 Major sigma-70 factor signature 188 196 3.1E-32 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DB29_00313 b703d73bde12030642e47fda2cbbfcf8 373 PRINTS PR00046 Major sigma-70 factor signature 348 359 3.1E-32 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DB29_00313 b703d73bde12030642e47fda2cbbfcf8 373 PRINTS PR00046 Major sigma-70 factor signature 333 348 3.1E-32 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DB29_00313 b703d73bde12030642e47fda2cbbfcf8 373 PRINTS PR00046 Major sigma-70 factor signature 312 324 3.1E-32 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DB29_00313 b703d73bde12030642e47fda2cbbfcf8 373 PRINTS PR00046 Major sigma-70 factor signature 164 177 3.1E-32 T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DB29_00313 b703d73bde12030642e47fda2cbbfcf8 373 Pfam PF04545 Sigma-70, region 4 308 361 5.1E-20 T 14-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 DB29_00313 b703d73bde12030642e47fda2cbbfcf8 373 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 333 359 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DB29_00313 b703d73bde12030642e47fda2cbbfcf8 373 SUPERFAMILY SSF88946 101 210 2.22E-55 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 DB29_00313 b703d73bde12030642e47fda2cbbfcf8 373 SUPERFAMILY SSF88659 213 286 1.5E-22 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like DB29_00313 b703d73bde12030642e47fda2cbbfcf8 373 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 10 373 34.292 T 14-10-2018 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 DB29_00313 b703d73bde12030642e47fda2cbbfcf8 373 Pfam PF00140 Sigma-70 factor, region 1.2 102 135 7.0E-20 T 14-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DB29_00313 b703d73bde12030642e47fda2cbbfcf8 373 Pfam PF04542 Sigma-70 region 2 140 209 2.0E-22 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 DB29_00313 b703d73bde12030642e47fda2cbbfcf8 373 SUPERFAMILY SSF88659 270 372 1.4E-29 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like DB29_00313 b703d73bde12030642e47fda2cbbfcf8 373 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 136 372 1.6E-123 T 14-10-2018 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 DB29_00313 b703d73bde12030642e47fda2cbbfcf8 373 Pfam PF04539 Sigma-70 region 3 219 295 1.9E-30 T 14-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 DB29_00313 b703d73bde12030642e47fda2cbbfcf8 373 Gene3D G3DSA:1.10.601.10 135 212 9.7E-51 T 14-10-2018 DB29_00313 b703d73bde12030642e47fda2cbbfcf8 373 Gene3D G3DSA:1.10.601.10 100 134 1.1E-12 T 14-10-2018 DB29_00313 b703d73bde12030642e47fda2cbbfcf8 373 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 136 361 6.2E-39 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 DB29_02515 2e492522dd7ccc33e106778df2dcf917 426 Pfam PF04932 O-Antigen ligase 222 333 2.8E-6 T 14-10-2018 IPR007016 O-antigen ligase-related DB29_03228 6ad3d00dd0fd9fbf103e215be52187e5 328 SUPERFAMILY SSF75620 1 324 9.55E-138 T 14-10-2018 DB29_03228 6ad3d00dd0fd9fbf103e215be52187e5 328 Gene3D G3DSA:3.30.160.20 186 281 1.8E-99 T 14-10-2018 DB29_03228 6ad3d00dd0fd9fbf103e215be52187e5 328 Pfam PF00472 RF-1 domain 189 298 1.1E-42 T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 DB29_03228 6ad3d00dd0fd9fbf103e215be52187e5 328 SMART SM00937 45 155 3.4E-58 T 14-10-2018 IPR005139 Peptide chain release factor GO:0006415 DB29_03228 6ad3d00dd0fd9fbf103e215be52187e5 328 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 205 221 - T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 DB29_03228 6ad3d00dd0fd9fbf103e215be52187e5 328 Hamap MF_00094 Peptide chain release factor 2 [prfB]. 1 326 37.723 T 14-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 DB29_03228 6ad3d00dd0fd9fbf103e215be52187e5 328 Gene3D G3DSA:1.20.58.410 1 76 1.0E-19 T 14-10-2018 DB29_03228 6ad3d00dd0fd9fbf103e215be52187e5 328 Pfam PF03462 PCRF domain 1 179 3.7E-61 T 14-10-2018 IPR005139 Peptide chain release factor GO:0006415 DB29_03228 6ad3d00dd0fd9fbf103e215be52187e5 328 Gene3D G3DSA:3.30.70.1660 90 319 1.8E-99 T 14-10-2018 DB29_03228 6ad3d00dd0fd9fbf103e215be52187e5 328 TIGRFAM TIGR00020 prfB: peptide chain release factor 2 1 324 1.2E-165 T 14-10-2018 IPR004374 Peptide chain release factor 2 GO:0005737|GO:0006415|GO:0016149 DB29_04328 16d0163cf0e64aee1701a846346a1990 335 PIRSF PIRSF026508 2 335 1.3E-83 T 14-10-2018 IPR008863 Toxic anion resistance DB29_04328 16d0163cf0e64aee1701a846346a1990 335 Pfam PF05816 Toxic anion resistance protein (TelA) 26 333 1.8E-59 T 14-10-2018 IPR008863 Toxic anion resistance DB29_00638 ed286f0b9a01959ac5b0dc738aa5a64e 115 Gene3D G3DSA:1.10.10.10 1 108 4.4E-35 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_00638 ed286f0b9a01959ac5b0dc738aa5a64e 115 Pfam PF01638 HxlR-like helix-turn-helix 14 102 5.1E-36 T 14-10-2018 IPR002577 Helix-turn-helix, HxlR type DB29_00638 ed286f0b9a01959ac5b0dc738aa5a64e 115 SUPERFAMILY SSF46785 2 96 1.3E-29 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_03332 d7dc9008891984e8f693d8592cd61419 329 SUPERFAMILY SSF51430 12 324 4.71E-91 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily DB29_03332 d7dc9008891984e8f693d8592cd61419 329 Gene3D G3DSA:3.20.20.100 14 329 1.1E-114 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily DB29_03332 d7dc9008891984e8f693d8592cd61419 329 Pfam PF00248 Aldo/keto reductase family 27 324 5.3E-71 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain DB29_03985 43ea62b1740a99782cfa6c8e0d3aa405 173 SUPERFAMILY SSF50346 100 170 5.34E-23 T 14-10-2018 IPR011033 PRC-barrel-like superfamily DB29_03985 43ea62b1740a99782cfa6c8e0d3aa405 173 Gene3D G3DSA:2.30.30.240 95 173 1.4E-24 T 14-10-2018 DB29_03985 43ea62b1740a99782cfa6c8e0d3aa405 173 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 4 170 26.027 T 14-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 DB29_03985 43ea62b1740a99782cfa6c8e0d3aa405 173 Pfam PF01782 RimM N-terminal domain 7 91 8.0E-23 T 14-10-2018 IPR002676 RimM, N-terminal GO:0006364 DB29_03985 43ea62b1740a99782cfa6c8e0d3aa405 173 Gene3D G3DSA:2.40.30.60 5 93 4.2E-20 T 14-10-2018 IPR036976 RimM, N-terminal domain superfamily GO:0006364 DB29_03985 43ea62b1740a99782cfa6c8e0d3aa405 173 Pfam PF05239 PRC-barrel domain 98 170 8.0E-15 T 14-10-2018 IPR027275 PRC-barrel domain DB29_03985 43ea62b1740a99782cfa6c8e0d3aa405 173 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 4 170 1.6E-54 T 14-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 DB29_03985 43ea62b1740a99782cfa6c8e0d3aa405 173 SUPERFAMILY SSF50447 3 92 2.59E-21 T 14-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily DB29_01931 35895d1a36810a10a7334054bd68f536 356 Gene3D G3DSA:3.30.590.10 8 262 7.4E-77 T 14-10-2018 DB29_01931 35895d1a36810a10a7334054bd68f536 356 SUPERFAMILY SSF55931 3 271 1.79E-85 T 14-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 DB29_01931 35895d1a36810a10a7334054bd68f536 356 Hamap MF_00602 Protein-arginine kinase [mcsB]. 11 349 38.654 T 14-10-2018 IPR023660 Protein arginine kinase GO:0016775 DB29_01931 35895d1a36810a10a7334054bd68f536 356 Pfam PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain 51 251 1.4E-74 T 14-10-2018 IPR022414 ATP:guanido phosphotransferase, catalytic domain GO:0016301|GO:0016772 Reactome: R-HSA-71288 DB29_01931 35895d1a36810a10a7334054bd68f536 356 ProSitePatterns PS00112 Phosphagen kinase active site signature. 166 172 - T 14-10-2018 IPR022415 ATP:guanido phosphotransferase active site GO:0016301|GO:0016772 Reactome: R-HSA-71288 DB29_03249 fb6b045f948a30bad09592e099058d0d 195 Gene3D G3DSA:3.30.230.40 91 195 2.0E-39 T 14-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 DB29_03249 fb6b045f948a30bad09592e099058d0d 195 Gene3D G3DSA:3.30.230.40 1 90 8.4E-35 T 14-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 DB29_03249 fb6b045f948a30bad09592e099058d0d 195 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 62 75 - T 14-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 DB29_03249 fb6b045f948a30bad09592e099058d0d 195 SUPERFAMILY SSF54211 88 180 7.59E-36 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DB29_03249 fb6b045f948a30bad09592e099058d0d 195 SUPERFAMILY SSF54211 3 86 1.14E-30 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DB29_03249 fb6b045f948a30bad09592e099058d0d 195 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 157 169 - T 14-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 DB29_03249 fb6b045f948a30bad09592e099058d0d 195 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 3 195 41.415 T 14-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 DB29_03249 fb6b045f948a30bad09592e099058d0d 195 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 32 175 1.3E-63 T 14-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 DB29_01622 6f712688903c0f8f4c10ae90de713594 303 TIGRFAM TIGR04379 myo_inos_iolE: myo-inosose-2 dehydratase 5 291 2.0E-110 T 14-10-2018 IPR030823 IolE/MocC family KEGG: 00562+4.2.1.44 DB29_01622 6f712688903c0f8f4c10ae90de713594 303 Hamap MF_01672 Inosose dehydratase [iolE]. 1 295 56.261 T 14-10-2018 IPR023952 Inosose dehydratase GO:0019310|GO:0030145|GO:0050114 KEGG: 00562+4.2.1.44 DB29_01622 6f712688903c0f8f4c10ae90de713594 303 Pfam PF01261 Xylose isomerase-like TIM barrel 82 231 5.8E-20 T 14-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain DB29_01622 6f712688903c0f8f4c10ae90de713594 303 Gene3D G3DSA:3.20.20.150 1 294 6.3E-76 T 14-10-2018 DB29_01622 6f712688903c0f8f4c10ae90de713594 303 SUPERFAMILY SSF51658 7 292 1.66E-46 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily DB29_01168 dae41bcf51a2275bceb7fc613ea593d7 286 ProSitePatterns PS00934 Glyoxalase I signature 1. 14 35 - T 14-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 DB29_01168 dae41bcf51a2275bceb7fc613ea593d7 286 Gene3D G3DSA:3.10.180.10 12 141 1.1E-26 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DB29_01168 dae41bcf51a2275bceb7fc613ea593d7 286 SUPERFAMILY SSF54593 169 285 3.36E-23 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DB29_01168 dae41bcf51a2275bceb7fc613ea593d7 286 Gene3D G3DSA:3.10.180.10 170 286 8.7E-19 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DB29_01168 dae41bcf51a2275bceb7fc613ea593d7 286 ProSitePatterns PS00934 Glyoxalase I signature 1. 174 195 - T 14-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 DB29_01168 dae41bcf51a2275bceb7fc613ea593d7 286 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 12 125 2.9E-11 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain DB29_01168 dae41bcf51a2275bceb7fc613ea593d7 286 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 172 219 3.4E-6 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain DB29_01168 dae41bcf51a2275bceb7fc613ea593d7 286 SUPERFAMILY SSF54593 7 170 1.36E-31 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DB29_01664 793c70f63b53e8da05377cf8821796dd 442 SMART SM00388 217 284 1.1E-17 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DB29_01664 793c70f63b53e8da05377cf8821796dd 442 SMART SM00387 325 438 5.7E-35 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DB29_01664 793c70f63b53e8da05377cf8821796dd 442 PRINTS PR00344 Bacterial sensor protein C-terminal signature 362 376 4.0E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB29_01664 793c70f63b53e8da05377cf8821796dd 442 PRINTS PR00344 Bacterial sensor protein C-terminal signature 397 415 4.0E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB29_01664 793c70f63b53e8da05377cf8821796dd 442 PRINTS PR00344 Bacterial sensor protein C-terminal signature 380 390 4.0E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB29_01664 793c70f63b53e8da05377cf8821796dd 442 PRINTS PR00344 Bacterial sensor protein C-terminal signature 422 435 4.0E-15 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB29_01664 793c70f63b53e8da05377cf8821796dd 442 Gene3D G3DSA:1.10.287.130 169 285 5.7E-27 T 14-10-2018 DB29_01664 793c70f63b53e8da05377cf8821796dd 442 SUPERFAMILY SSF47384 200 281 3.53E-17 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DB29_01664 793c70f63b53e8da05377cf8821796dd 442 SUPERFAMILY SSF55874 275 436 7.91E-37 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB29_01664 793c70f63b53e8da05377cf8821796dd 442 SUPERFAMILY SSF158472 168 214 1.7E-5 T 14-10-2018 DB29_01664 793c70f63b53e8da05377cf8821796dd 442 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 329 437 1.1E-22 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DB29_01664 793c70f63b53e8da05377cf8821796dd 442 SMART SM00304 163 216 2.1E-5 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DB29_01664 793c70f63b53e8da05377cf8821796dd 442 Gene3D G3DSA:3.30.565.10 291 441 1.5E-37 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB29_01664 793c70f63b53e8da05377cf8821796dd 442 Pfam PF00512 His Kinase A (phospho-acceptor) domain 218 283 2.4E-14 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DB29_00589 fd0a2e0cc779630911bf9d1fd651fb8e 923 Pfam PF00149 Calcineurin-like phosphoesterase 37 231 4.3E-10 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 DB29_00589 fd0a2e0cc779630911bf9d1fd651fb8e 923 SUPERFAMILY SSF51055 875 922 2.22E-14 T 14-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 DB29_00589 fd0a2e0cc779630911bf9d1fd651fb8e 923 SMART SM00495 876 921 4.8E-16 T 14-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 DB29_00589 fd0a2e0cc779630911bf9d1fd651fb8e 923 SMART SM00495 821 866 1.3E-14 T 14-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 DB29_00589 fd0a2e0cc779630911bf9d1fd651fb8e 923 SUPERFAMILY SSF55816 505 688 6.93E-31 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DB29_00589 fd0a2e0cc779630911bf9d1fd651fb8e 923 PRINTS PR01607 Apyrase family signature 214 237 2.9E-33 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DB29_00589 fd0a2e0cc779630911bf9d1fd651fb8e 923 PRINTS PR01607 Apyrase family signature 430 449 2.9E-33 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DB29_00589 fd0a2e0cc779630911bf9d1fd651fb8e 923 PRINTS PR01607 Apyrase family signature 242 262 2.9E-33 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DB29_00589 fd0a2e0cc779630911bf9d1fd651fb8e 923 PRINTS PR01607 Apyrase family signature 358 381 2.9E-33 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DB29_00589 fd0a2e0cc779630911bf9d1fd651fb8e 923 PRINTS PR01607 Apyrase family signature 195 212 2.9E-33 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DB29_00589 fd0a2e0cc779630911bf9d1fd651fb8e 923 PRINTS PR01607 Apyrase family signature 34 52 2.9E-33 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DB29_00589 fd0a2e0cc779630911bf9d1fd651fb8e 923 ProSitePatterns PS00785 5'-nucleotidase signature 1. 36 48 - T 14-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DB29_00589 fd0a2e0cc779630911bf9d1fd651fb8e 923 SUPERFAMILY SSF56300 33 304 7.82E-75 T 14-10-2018 DB29_00589 fd0a2e0cc779630911bf9d1fd651fb8e 923 Gene3D G3DSA:3.90.780.10 307 488 4.8E-36 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DB29_00589 fd0a2e0cc779630911bf9d1fd651fb8e 923 Gene3D G3DSA:3.90.780.10 510 692 1.6E-29 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DB29_00589 fd0a2e0cc779630911bf9d1fd651fb8e 923 SUPERFAMILY SSF51055 817 869 2.09E-15 T 14-10-2018 IPR036573 Carbohydrate-binding module superfamily 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 DB29_00589 fd0a2e0cc779630911bf9d1fd651fb8e 923 Pfam PF02872 5'-nucleotidase, C-terminal domain 507 645 1.3E-26 T 14-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DB29_00589 fd0a2e0cc779630911bf9d1fd651fb8e 923 Pfam PF02872 5'-nucleotidase, C-terminal domain 307 453 1.8E-35 T 14-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DB29_00589 fd0a2e0cc779630911bf9d1fd651fb8e 923 Gene3D G3DSA:2.10.10.20 876 919 2.4E-17 T 14-10-2018 DB29_00589 fd0a2e0cc779630911bf9d1fd651fb8e 923 Gene3D G3DSA:2.10.10.20 821 864 1.6E-16 T 14-10-2018 DB29_00589 fd0a2e0cc779630911bf9d1fd651fb8e 923 SUPERFAMILY SSF55816 303 491 4.71E-38 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DB29_00589 fd0a2e0cc779630911bf9d1fd651fb8e 923 Pfam PF02839 Carbohydrate binding domain 893 918 3.6E-5 T 14-10-2018 IPR003610 Carbohydrate-binding module family 5/12 GO:0004553|GO:0005576|GO:0005975|GO:0030246 DB29_00589 fd0a2e0cc779630911bf9d1fd651fb8e 923 Gene3D G3DSA:3.60.21.10 31 305 5.0E-78 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like DB29_02902 b7f6338e8970243ddda7d652167ce4fb 354 SMART SM00387 251 343 2.2E-7 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DB29_02902 b7f6338e8970243ddda7d652167ce4fb 354 Gene3D G3DSA:3.30.565.10 213 344 5.9E-30 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB29_02902 b7f6338e8970243ddda7d652167ce4fb 354 SUPERFAMILY SSF55874 222 340 8.64E-19 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB29_02902 b7f6338e8970243ddda7d652167ce4fb 354 Pfam PF07730 Histidine kinase 148 214 1.3E-18 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 DB29_02902 b7f6338e8970243ddda7d652167ce4fb 354 PIRSF PIRSF037431 1 349 7.4E-128 T 14-10-2018 IPR017202 Sensor histidine kinase LiaS/VraS GO:0000155|GO:0000160|GO:0004673|GO:0016021 DB29_02051 bfb0f9dbe1d578b70774d8329ff7a5ea 326 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 160 171 8.7E-35 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_02051 bfb0f9dbe1d578b70774d8329ff7a5ea 326 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 286 306 8.7E-35 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_02051 bfb0f9dbe1d578b70774d8329ff7a5ea 326 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 253 270 8.7E-35 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_02051 bfb0f9dbe1d578b70774d8329ff7a5ea 326 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 206 222 8.7E-35 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_02051 bfb0f9dbe1d578b70774d8329ff7a5ea 326 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 232 251 8.7E-35 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_02051 bfb0f9dbe1d578b70774d8329ff7a5ea 326 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 102 8.7E-35 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_02051 bfb0f9dbe1d578b70774d8329ff7a5ea 326 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 160 171 6.2E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_02051 bfb0f9dbe1d578b70774d8329ff7a5ea 326 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 212 220 6.2E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_02051 bfb0f9dbe1d578b70774d8329ff7a5ea 326 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 232 251 6.2E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_02051 bfb0f9dbe1d578b70774d8329ff7a5ea 326 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 219 247 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 DB29_02051 bfb0f9dbe1d578b70774d8329ff7a5ea 326 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 93 322 1.0E-64 T 14-10-2018 DB29_02051 bfb0f9dbe1d578b70774d8329ff7a5ea 326 SUPERFAMILY SSF51735 83 323 9.71E-82 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_02051 bfb0f9dbe1d578b70774d8329ff7a5ea 326 Gene3D G3DSA:3.40.50.720 41 324 1.0E-85 T 14-10-2018 DB29_00349 a029cb3a3bebac8ac8882b9b8b9b8c08 192 Hamap MF_01151 Protein GrpE [grpE]. 4 192 21.229 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 DB29_00349 a029cb3a3bebac8ac8882b9b8b9b8c08 192 SUPERFAMILY SSF51064 137 192 7.72E-19 T 14-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 DB29_00349 a029cb3a3bebac8ac8882b9b8b9b8c08 192 PRINTS PR00773 GrpE protein signature 144 159 1.9E-28 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 DB29_00349 a029cb3a3bebac8ac8882b9b8b9b8c08 192 PRINTS PR00773 GrpE protein signature 62 78 1.9E-28 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 DB29_00349 a029cb3a3bebac8ac8882b9b8b9b8c08 192 PRINTS PR00773 GrpE protein signature 90 105 1.9E-28 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 DB29_00349 a029cb3a3bebac8ac8882b9b8b9b8c08 192 PRINTS PR00773 GrpE protein signature 171 190 1.9E-28 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 DB29_00349 a029cb3a3bebac8ac8882b9b8b9b8c08 192 Pfam PF01025 GrpE 30 192 3.3E-52 T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 DB29_00349 a029cb3a3bebac8ac8882b9b8b9b8c08 192 Gene3D G3DSA:2.30.22.10 136 192 6.5E-24 T 14-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 DB29_00349 a029cb3a3bebac8ac8882b9b8b9b8c08 192 Gene3D G3DSA:3.90.20.20 2 134 1.5E-23 T 14-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 DB29_00349 a029cb3a3bebac8ac8882b9b8b9b8c08 192 SUPERFAMILY SSF58014 42 136 1.31E-24 T 14-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 DB29_00349 a029cb3a3bebac8ac8882b9b8b9b8c08 192 ProSitePatterns PS01071 grpE protein signature. 147 190 - T 14-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 DB29_03786 fc7d4e61c23e9f93139d1760993824b2 98 Pfam PF14118 YfzA-like protein 4 96 1.2E-44 T 14-10-2018 IPR025627 YfzA-like protein DB29_00953 00ec5517ccac95316ea3f411c36b5dff 511 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 2 511 44.191 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 DB29_00953 00ec5517ccac95316ea3f411c36b5dff 511 Gene3D G3DSA:3.40.140.20 204 359 2.9E-60 T 14-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 DB29_00953 00ec5517ccac95316ea3f411c36b5dff 511 SMART SM00798 135 446 2.4E-198 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 DB29_00953 00ec5517ccac95316ea3f411c36b5dff 511 Pfam PF01808 AICARFT/IMPCHase bienzyme 135 445 3.4E-118 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 DB29_00953 00ec5517ccac95316ea3f411c36b5dff 511 Pfam PF02142 MGS-like domain 14 129 9.5E-25 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain DB29_00953 00ec5517ccac95316ea3f411c36b5dff 511 SMART SM00851 14 130 1.6E-54 T 14-10-2018 IPR011607 Methylglyoxal synthase-like domain DB29_00953 00ec5517ccac95316ea3f411c36b5dff 511 Gene3D G3DSA:3.40.140.20 385 511 7.9E-56 T 14-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 DB29_00953 00ec5517ccac95316ea3f411c36b5dff 511 SUPERFAMILY SSF52335 2 194 6.87E-68 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily DB29_00953 00ec5517ccac95316ea3f411c36b5dff 511 PIRSF PIRSF000414 1 511 1.4E-211 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 DB29_00953 00ec5517ccac95316ea3f411c36b5dff 511 Gene3D G3DSA:3.40.50.1380 1 198 3.2E-84 T 14-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily DB29_00953 00ec5517ccac95316ea3f411c36b5dff 511 SUPERFAMILY SSF53927 208 511 3.81E-125 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 DB29_00953 00ec5517ccac95316ea3f411c36b5dff 511 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 3 511 2.5E-228 T 14-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 DB29_00685 60c28d12d50a8c37fdb5a13c027c3651 139 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 131 1.4E-36 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type DB29_00685 60c28d12d50a8c37fdb5a13c027c3651 139 SUPERFAMILY SSF46785 2 135 2.1E-32 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_00685 60c28d12d50a8c37fdb5a13c027c3651 139 Gene3D G3DSA:1.10.10.10 1 139 1.2E-32 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_00685 60c28d12d50a8c37fdb5a13c027c3651 139 Pfam PF02082 Transcriptional regulator 1 83 7.6E-27 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type DB29_00685 60c28d12d50a8c37fdb5a13c027c3651 139 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 14-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site DB29_02494 5a05b5b82738dcc7ad03b47a672bb112 274 Pfam PF13714 Phosphoenolpyruvate phosphomutase 12 249 9.9E-76 T 14-10-2018 DB29_02494 5a05b5b82738dcc7ad03b47a672bb112 274 Gene3D G3DSA:3.20.20.60 3 271 8.6E-74 T 14-10-2018 DB29_02494 5a05b5b82738dcc7ad03b47a672bb112 274 SUPERFAMILY SSF51621 4 272 1.7E-67 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 DB29_00784 2d597151a9139d369ce6a2cc3ac851bf 471 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 50 66 7.0E-8 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DB29_00784 2d597151a9139d369ce6a2cc3ac851bf 471 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 36 50 7.0E-8 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DB29_00784 2d597151a9139d369ce6a2cc3ac851bf 471 SUPERFAMILY SSF46785 6 88 1.43E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_00784 2d597151a9139d369ce6a2cc3ac851bf 471 SMART SM00345 17 76 1.2E-20 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DB29_00784 2d597151a9139d369ce6a2cc3ac851bf 471 Gene3D G3DSA:3.40.640.10 151 363 2.4E-89 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DB29_00784 2d597151a9139d369ce6a2cc3ac851bf 471 Pfam PF00392 Bacterial regulatory proteins, gntR family 15 76 7.8E-19 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DB29_00784 2d597151a9139d369ce6a2cc3ac851bf 471 Gene3D G3DSA:1.10.10.10 1 77 4.4E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_00784 2d597151a9139d369ce6a2cc3ac851bf 471 SUPERFAMILY SSF53383 102 468 3.39E-81 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DB29_00784 2d597151a9139d369ce6a2cc3ac851bf 471 Pfam PF00155 Aminotransferase class I and II 117 459 4.3E-34 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 DB29_00784 2d597151a9139d369ce6a2cc3ac851bf 471 Gene3D G3DSA:3.90.1150.10 110 467 2.4E-89 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DB29_02407 620554fd5069b4a08b611c500ed8e179 144 Pfam PF14567 SMI1-KNR4 cell-wall 6 138 5.0E-30 T 14-10-2018 DB29_02407 620554fd5069b4a08b611c500ed8e179 144 SMART SM00860 23 138 6.7E-9 T 14-10-2018 IPR018958 Knr4/Smi1-like domain DB29_02407 620554fd5069b4a08b611c500ed8e179 144 Gene3D G3DSA:3.40.1580.10 4 140 1.7E-22 T 14-10-2018 IPR037883 Knr4/Smi1-like domain superfamily DB29_02407 620554fd5069b4a08b611c500ed8e179 144 SUPERFAMILY SSF160631 4 140 3.4E-31 T 14-10-2018 DB29_02920 27336a95b28b210958ae9d2b30ae2d91 334 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 5 15 9.1E-5 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DB29_02920 27336a95b28b210958ae9d2b30ae2d91 334 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 15 25 9.1E-5 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DB29_02920 27336a95b28b210958ae9d2b30ae2d91 334 Gene3D G3DSA:3.40.50.2300 163 331 1.3E-73 T 14-10-2018 DB29_02920 27336a95b28b210958ae9d2b30ae2d91 334 ProSitePatterns PS00356 LacI-type HTH domain signature. 6 24 - T 14-10-2018 DB29_02920 27336a95b28b210958ae9d2b30ae2d91 334 Gene3D G3DSA:3.40.50.2300 65 326 1.3E-73 T 14-10-2018 DB29_02920 27336a95b28b210958ae9d2b30ae2d91 334 Pfam PF00356 Bacterial regulatory proteins, lacI family 5 51 5.0E-20 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DB29_02920 27336a95b28b210958ae9d2b30ae2d91 334 Gene3D G3DSA:1.10.260.40 5 62 1.7E-23 T 14-10-2018 DB29_02920 27336a95b28b210958ae9d2b30ae2d91 334 Pfam PF13377 Periplasmic binding protein-like domain 171 334 9.4E-31 T 14-10-2018 DB29_02920 27336a95b28b210958ae9d2b30ae2d91 334 SMART SM00354 3 74 9.5E-35 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DB29_02920 27336a95b28b210958ae9d2b30ae2d91 334 SUPERFAMILY SSF53822 63 334 1.34E-69 T 14-10-2018 IPR028082 Periplasmic binding protein-like I DB29_02920 27336a95b28b210958ae9d2b30ae2d91 334 SUPERFAMILY SSF47413 3 62 6.95E-17 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DB29_00347 43e32eccf074d5d43388d51241f065ad 372 SUPERFAMILY SSF46565 2 102 1.96E-36 T 14-10-2018 IPR036869 Chaperone J-domain superfamily DB29_00347 43e32eccf074d5d43388d51241f065ad 372 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 368 41.685 T 14-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 DB29_00347 43e32eccf074d5d43388d51241f065ad 372 SMART SM00271 4 61 9.4E-31 T 14-10-2018 IPR001623 DnaJ domain DB29_00347 43e32eccf074d5d43388d51241f065ad 372 SUPERFAMILY SSF57938 129 210 6.93E-19 T 14-10-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily DB29_00347 43e32eccf074d5d43388d51241f065ad 372 SUPERFAMILY SSF49493 109 256 3.53E-20 T 14-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 DB29_00347 43e32eccf074d5d43388d51241f065ad 372 Pfam PF01556 DnaJ C terminal domain 115 332 1.5E-45 T 14-10-2018 IPR002939 Chaperone DnaJ, C-terminal DB29_00347 43e32eccf074d5d43388d51241f065ad 372 Pfam PF00684 DnaJ central domain 142 206 1.4E-13 T 14-10-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 DB29_00347 43e32eccf074d5d43388d51241f065ad 372 PRINTS PR00625 DnaJ domain signature 25 40 6.9E-31 T 14-10-2018 IPR001623 DnaJ domain DB29_00347 43e32eccf074d5d43388d51241f065ad 372 PRINTS PR00625 DnaJ domain signature 41 61 6.9E-31 T 14-10-2018 IPR001623 DnaJ domain DB29_00347 43e32eccf074d5d43388d51241f065ad 372 PRINTS PR00625 DnaJ domain signature 61 80 6.9E-31 T 14-10-2018 IPR001623 DnaJ domain DB29_00347 43e32eccf074d5d43388d51241f065ad 372 PRINTS PR00625 DnaJ domain signature 7 25 6.9E-31 T 14-10-2018 IPR001623 DnaJ domain DB29_00347 43e32eccf074d5d43388d51241f065ad 372 Gene3D G3DSA:2.60.260.20 253 332 5.5E-31 T 14-10-2018 DB29_00347 43e32eccf074d5d43388d51241f065ad 372 Pfam PF00226 DnaJ domain 5 66 1.0E-25 T 14-10-2018 IPR001623 DnaJ domain DB29_00347 43e32eccf074d5d43388d51241f065ad 372 Gene3D G3DSA:2.60.260.20 112 248 2.3E-36 T 14-10-2018 DB29_00347 43e32eccf074d5d43388d51241f065ad 372 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 347 2.8E-143 T 14-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 DB29_00347 43e32eccf074d5d43388d51241f065ad 372 Gene3D G3DSA:1.10.287.110 1 107 1.9E-38 T 14-10-2018 IPR036869 Chaperone J-domain superfamily DB29_00347 43e32eccf074d5d43388d51241f065ad 372 SUPERFAMILY SSF49493 257 343 1.24E-23 T 14-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 DB29_00347 43e32eccf074d5d43388d51241f065ad 372 ProSitePatterns PS00636 Nt-dnaJ domain signature. 46 65 - T 14-10-2018 IPR018253 DnaJ domain, conserved site DB29_00347 43e32eccf074d5d43388d51241f065ad 372 Gene3D G3DSA:2.10.230.10 142 206 2.3E-36 T 14-10-2018 DB29_03361 c8a4d15cb3b301111779ff07e993d180 356 Gene3D G3DSA:3.40.50.1100 15 323 9.0E-121 T 14-10-2018 DB29_03361 c8a4d15cb3b301111779ff07e993d180 356 TIGRFAM TIGR00260 thrC: threonine synthase 11 323 3.0E-97 T 14-10-2018 IPR004450 Threonine synthase-like DB29_03361 c8a4d15cb3b301111779ff07e993d180 356 Gene3D G3DSA:3.40.50.1100 60 156 9.0E-121 T 14-10-2018 DB29_03361 c8a4d15cb3b301111779ff07e993d180 356 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 25 317 1.3E-77 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme DB29_03361 c8a4d15cb3b301111779ff07e993d180 356 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 52 65 - T 14-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 DB29_03361 c8a4d15cb3b301111779ff07e993d180 356 PIRSF PIRSF038945 1 349 3.4E-156 T 14-10-2018 IPR026260 Threonine synthase, bacterial/archaeal GO:0004795|GO:0009088 KEGG: 00260+4.2.3.1|KEGG: 00750+4.2.3.1 DB29_03361 c8a4d15cb3b301111779ff07e993d180 356 SUPERFAMILY SSF53686 6 349 1.57E-103 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme DB29_03191 a00016084b77ac6f0d68dcb2f60a2937 380 Gene3D G3DSA:3.40.50.11820 9 369 8.7E-143 T 14-10-2018 DB29_03191 a00016084b77ac6f0d68dcb2f60a2937 380 Pfam PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase 2 376 1.5E-127 T 14-10-2018 IPR007554 CDP-glycerol glycerophosphotransferase GO:0016020|GO:0047355 DB29_03191 a00016084b77ac6f0d68dcb2f60a2937 380 SUPERFAMILY SSF53756 136 374 2.98E-16 T 14-10-2018 DB29_03191 a00016084b77ac6f0d68dcb2f60a2937 380 Gene3D G3DSA:3.40.50.12580 179 362 8.7E-143 T 14-10-2018 DB29_04273 ca196d2379325cde04504ab984cfe4cf 142 SMART SM00347 20 120 7.9E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DB29_04273 ca196d2379325cde04504ab984cfe4cf 142 Pfam PF01047 MarR family 27 85 5.8E-10 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DB29_04273 ca196d2379325cde04504ab984cfe4cf 142 Gene3D G3DSA:1.10.10.10 2 134 1.3E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_04273 ca196d2379325cde04504ab984cfe4cf 142 SUPERFAMILY SSF46785 15 133 5.01E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_04093 f04129a6f4df1e88710b964846fbb288 486 SUPERFAMILY SSF118116 296 484 2.35E-57 T 14-10-2018 IPR037198 MutL, C-terminal domain superfamily DB29_04093 f04129a6f4df1e88710b964846fbb288 486 SMART SM00853 300 442 6.7E-56 T 14-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 DB29_04093 f04129a6f4df1e88710b964846fbb288 486 Gene3D G3DSA:3.30.1370.100 342 435 2.6E-67 T 14-10-2018 DB29_04093 f04129a6f4df1e88710b964846fbb288 486 SMART SM01340 39 157 3.9E-56 T 14-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 DB29_04093 f04129a6f4df1e88710b964846fbb288 486 Pfam PF08676 MutL C terminal dimerisation domain 300 442 1.3E-48 T 14-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 DB29_04093 f04129a6f4df1e88710b964846fbb288 486 SUPERFAMILY SSF54211 21 157 6.83E-39 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DB29_04093 f04129a6f4df1e88710b964846fbb288 486 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 39 156 3.9E-39 T 14-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 DB29_04093 f04129a6f4df1e88710b964846fbb288 486 Gene3D G3DSA:3.30.230.10 44 156 5.5E-33 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DB29_04093 f04129a6f4df1e88710b964846fbb288 486 Gene3D G3DSA:2.30.42.20 301 484 2.6E-67 T 14-10-2018 DB29_01119 c0ad43d4d92604af9f9a253e1f68a43f 94 Gene3D G3DSA:2.30.33.40 1 93 4.9E-39 T 14-10-2018 IPR037124 GroES chaperonin superfamily GO:0005737|GO:0006457 DB29_01119 c0ad43d4d92604af9f9a253e1f68a43f 94 PRINTS PR00297 10kDa chaperonin signature 80 93 1.4E-33 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 DB29_01119 c0ad43d4d92604af9f9a253e1f68a43f 94 PRINTS PR00297 10kDa chaperonin signature 24 45 1.4E-33 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 DB29_01119 c0ad43d4d92604af9f9a253e1f68a43f 94 PRINTS PR00297 10kDa chaperonin signature 2 17 1.4E-33 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 DB29_01119 c0ad43d4d92604af9f9a253e1f68a43f 94 PRINTS PR00297 10kDa chaperonin signature 59 71 1.4E-33 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 DB29_01119 c0ad43d4d92604af9f9a253e1f68a43f 94 ProSitePatterns PS00681 Chaperonins cpn10 signature. 2 26 - T 14-10-2018 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 DB29_01119 c0ad43d4d92604af9f9a253e1f68a43f 94 Pfam PF00166 Chaperonin 10 Kd subunit 2 93 9.0E-37 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 DB29_01119 c0ad43d4d92604af9f9a253e1f68a43f 94 SMART SM00883 1 93 9.3E-56 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 DB29_01119 c0ad43d4d92604af9f9a253e1f68a43f 94 Hamap MF_00580 10 kDa chaperonin [groS]. 1 94 27.248 T 14-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 DB29_01119 c0ad43d4d92604af9f9a253e1f68a43f 94 SUPERFAMILY SSF50129 2 93 1.13E-34 T 14-10-2018 IPR011032 GroES-like superfamily DB29_00910 b8b5788eaf354b3feea8ea0381732df6 384 PIRSF PIRSF012509 1 384 3.9E-135 T 14-10-2018 IPR011426 CamS sex pheromone cAM373 DB29_00910 b8b5788eaf354b3feea8ea0381732df6 384 Gene3D G3DSA:3.10.570.10 38 384 5.5E-106 T 14-10-2018 DB29_00910 b8b5788eaf354b3feea8ea0381732df6 384 Pfam PF07537 CamS sex pheromone cAM373 precursor 63 376 9.1E-102 T 14-10-2018 IPR011426 CamS sex pheromone cAM373 DB29_00905 8d615007878d723559dd016a8c07ed35 119 Gene3D G3DSA:3.90.20.10 42 119 1.6E-6 T 14-10-2018 DB29_01982 83869191c7444ffced407b7be4488f77 292 ProDom PD127708 YABG PROTEASE SPORULATION-SPECIFIC PEPTIDASE U57 BH0058 ORTHOLOG SPORE FAMILY B.SUBTILIS 3 276 1.0E-162 T 14-10-2018 IPR008764 Peptidase U57, YabG DB29_01982 83869191c7444ffced407b7be4488f77 292 Pfam PF05582 YabG peptidase U57 4 281 1.3E-107 T 14-10-2018 IPR008764 Peptidase U57, YabG DB29_01982 83869191c7444ffced407b7be4488f77 292 PIRSF PIRSF011575 2 286 1.2E-100 T 14-10-2018 IPR008764 Peptidase U57, YabG DB29_01982 83869191c7444ffced407b7be4488f77 292 TIGRFAM TIGR02855 spore_yabG: sporulation peptidase YabG 4 281 6.3E-133 T 14-10-2018 IPR008764 Peptidase U57, YabG DB29_01227 bb666be928f451b33ae8337972a5cb75 307 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 300 2.9E-40 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DB29_01227 bb666be928f451b33ae8337972a5cb75 307 Gene3D G3DSA:1.10.3720.10 84 296 4.1E-21 T 14-10-2018 IPR035906 MetI-like superfamily DB29_01227 bb666be928f451b33ae8337972a5cb75 307 SUPERFAMILY SSF161098 88 283 5.56E-19 T 14-10-2018 IPR035906 MetI-like superfamily DB29_01876 0e49fdaa4620041fcc77680ab143de91 314 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 26 221 3.6E-25 T 14-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DB29_01876 0e49fdaa4620041fcc77680ab143de91 314 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 240 304 3.7E-29 T 14-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DB29_01876 0e49fdaa4620041fcc77680ab143de91 314 SMART SM00662 20 227 2.7E-110 T 14-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DB29_01876 0e49fdaa4620041fcc77680ab143de91 314 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 20 312 2.6E-126 T 14-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DB29_01876 0e49fdaa4620041fcc77680ab143de91 314 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 1 313 37.45 T 14-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DB29_01876 0e49fdaa4620041fcc77680ab143de91 314 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 253 295 6.0E-18 T 14-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DB29_01876 0e49fdaa4620041fcc77680ab143de91 314 Gene3D G3DSA:1.10.150.20 237 314 2.9E-33 T 14-10-2018 DB29_01876 0e49fdaa4620041fcc77680ab143de91 314 Gene3D G3DSA:2.170.120.12 50 170 2.0E-91 T 14-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DB29_01876 0e49fdaa4620041fcc77680ab143de91 314 SUPERFAMILY SSF56553 50 171 4.19E-45 T 14-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DB29_01876 0e49fdaa4620041fcc77680ab143de91 314 SUPERFAMILY SSF47789 247 311 2.75E-24 T 14-10-2018 DB29_01876 0e49fdaa4620041fcc77680ab143de91 314 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 56 152 9.7E-27 T 14-10-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DB29_01876 0e49fdaa4620041fcc77680ab143de91 314 Gene3D G3DSA:3.30.1360.10 16 221 2.0E-91 T 14-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DB29_01876 0e49fdaa4620041fcc77680ab143de91 314 SUPERFAMILY SSF55257 5 226 7.98E-32 T 14-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 DB29_03973 7d40104e010a35564f0baccf3ff49e4b 247 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 5 185 3.4E-6 T 14-10-2018 DB29_03973 7d40104e010a35564f0baccf3ff49e4b 247 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 DB29_03973 7d40104e010a35564f0baccf3ff49e4b 247 Gene3D G3DSA:3.40.50.720 1 246 5.6E-91 T 14-10-2018 DB29_03973 7d40104e010a35564f0baccf3ff49e4b 247 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 11 244 2.2E-72 T 14-10-2018 DB29_03973 7d40104e010a35564f0baccf3ff49e4b 247 SUPERFAMILY SSF51735 4 246 2.79E-92 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_03973 7d40104e010a35564f0baccf3ff49e4b 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 4.9E-50 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_03973 7d40104e010a35564f0baccf3ff49e4b 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 4.9E-50 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_03973 7d40104e010a35564f0baccf3ff49e4b 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 4.9E-50 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_03973 7d40104e010a35564f0baccf3ff49e4b 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 208 228 4.9E-50 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_03973 7d40104e010a35564f0baccf3ff49e4b 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 4.9E-50 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_03973 7d40104e010a35564f0baccf3ff49e4b 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 4.9E-50 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_03973 7d40104e010a35564f0baccf3ff49e4b 247 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 7 245 1.2E-107 T 14-10-2018 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 DB29_03973 7d40104e010a35564f0baccf3ff49e4b 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 8.3E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_03973 7d40104e010a35564f0baccf3ff49e4b 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 8.3E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_03973 7d40104e010a35564f0baccf3ff49e4b 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 8.3E-16 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_00376 81368dc74f8d21203d97354b5a917ad7 493 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 215 236 4.4E-13 T 14-10-2018 DB29_00376 81368dc74f8d21203d97354b5a917ad7 493 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 75 100 4.4E-13 T 14-10-2018 DB29_00376 81368dc74f8d21203d97354b5a917ad7 493 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 237 263 4.4E-13 T 14-10-2018 DB29_00376 81368dc74f8d21203d97354b5a917ad7 493 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 411 430 4.4E-13 T 14-10-2018 DB29_00376 81368dc74f8d21203d97354b5a917ad7 493 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 307 319 4.4E-13 T 14-10-2018 DB29_00376 81368dc74f8d21203d97354b5a917ad7 493 Pfam PF00361 Proton-conducting membrane transporter 127 413 2.8E-59 T 14-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DB29_02591 3e5b1e9e692cdfc40c633cda67cf1a3f 444 Gene3D G3DSA:2.30.40.10 12 421 5.1E-108 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DB29_02591 3e5b1e9e692cdfc40c633cda67cf1a3f 444 Gene3D G3DSA:3.20.20.140 60 426 5.1E-108 T 14-10-2018 DB29_02591 3e5b1e9e692cdfc40c633cda67cf1a3f 444 Pfam PF01979 Amidohydrolase family 55 414 3.2E-27 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 DB29_02591 3e5b1e9e692cdfc40c633cda67cf1a3f 444 SUPERFAMILY SSF51338 5 438 4.89E-24 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DB29_02591 3e5b1e9e692cdfc40c633cda67cf1a3f 444 SUPERFAMILY SSF51556 58 367 1.83E-62 T 14-10-2018 IPR032466 Metal-dependent hydrolase DB29_02613 bc0a2e9876e1c214c43e5a87096ea167 209 Gene3D G3DSA:1.25.40.340 1 204 6.7E-57 T 14-10-2018 IPR036117 DhaL domain superfamily GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 DB29_02613 bc0a2e9876e1c214c43e5a87096ea167 209 TIGRFAM TIGR02365 dha_L_ycgS: dihydroxyacetone kinase, L subunit 9 200 2.8E-52 T 14-10-2018 IPR012737 Dihydroxyacetone kinase, subunit L GO:0016772 KEGG: 00561+2.7.1.121 DB29_02613 bc0a2e9876e1c214c43e5a87096ea167 209 SMART SM01120 31 201 2.4E-58 T 14-10-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 DB29_02613 bc0a2e9876e1c214c43e5a87096ea167 209 SUPERFAMILY SSF101473 2 202 2.35E-50 T 14-10-2018 IPR036117 DhaL domain superfamily GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 DB29_02613 bc0a2e9876e1c214c43e5a87096ea167 209 Pfam PF02734 DAK2 domain 32 200 3.9E-46 T 14-10-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 DB29_00471 022342bb01102b5b1c72dcecfb3da051 282 Gene3D G3DSA:3.20.20.70 122 264 2.2E-98 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DB29_00471 022342bb01102b5b1c72dcecfb3da051 282 PIRSF PIRSF006250 2 277 7.2E-94 T 14-10-2018 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 DB29_00471 022342bb01102b5b1c72dcecfb3da051 282 Gene3D G3DSA:3.90.1170.20 13 272 2.2E-98 T 14-10-2018 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily GO:0016763 Reactome: R-HSA-196807 DB29_00471 022342bb01102b5b1c72dcecfb3da051 282 SUPERFAMILY SSF51690 108 273 3.73E-55 T 14-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 DB29_00471 022342bb01102b5b1c72dcecfb3da051 282 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 108 272 3.1E-58 T 14-10-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 Reactome: R-HSA-196807 DB29_00471 022342bb01102b5b1c72dcecfb3da051 282 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 10 273 1.0E-95 T 14-10-2018 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|Reactome: R-HSA-196807 DB29_00471 022342bb01102b5b1c72dcecfb3da051 282 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 18 106 6.5E-24 T 14-10-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 DB29_00471 022342bb01102b5b1c72dcecfb3da051 282 SUPERFAMILY SSF54675 2 107 9.03E-28 T 14-10-2018 DB29_03349 366dcfc849badca61097c47270667341 255 Pfam PF09560 Sporulation protein YunB (Spo_YunB) 139 227 1.3E-23 T 14-10-2018 IPR014197 Sporulation protein YunB DB29_03349 366dcfc849badca61097c47270667341 255 TIGRFAM TIGR02832 spo_yunB: sporulation protein YunB 19 231 1.5E-74 T 14-10-2018 IPR014197 Sporulation protein YunB DB29_03349 366dcfc849badca61097c47270667341 255 PIRSF PIRSF021383 7 238 5.1E-52 T 14-10-2018 IPR014197 Sporulation protein YunB DB29_02937 932efd6fa121582d30993b1117841214 540 Pfam PF00005 ABC transporter 91 125 5.7E-6 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB29_02937 932efd6fa121582d30993b1117841214 540 Gene3D G3DSA:3.40.50.300 77 224 7.4E-32 T 14-10-2018 DB29_02937 932efd6fa121582d30993b1117841214 540 Pfam PF00005 ABC transporter 24 55 1.6E-7 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB29_02937 932efd6fa121582d30993b1117841214 540 SUPERFAMILY SSF52540 5 190 3.7E-35 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_02937 932efd6fa121582d30993b1117841214 540 SUPERFAMILY SSF52540 273 472 4.35E-34 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_02937 932efd6fa121582d30993b1117841214 540 Gene3D G3DSA:3.40.50.300 281 487 2.9E-42 T 14-10-2018 DB29_02937 932efd6fa121582d30993b1117841214 540 ProSitePatterns PS00211 ABC transporters family signature. 400 414 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB29_02937 932efd6fa121582d30993b1117841214 540 SMART SM00382 312 477 3.8E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_02937 932efd6fa121582d30993b1117841214 540 SMART SM00382 28 168 1.2E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_02937 932efd6fa121582d30993b1117841214 540 Gene3D G3DSA:3.40.50.300 4 76 1.4E-10 T 14-10-2018 DB29_02937 932efd6fa121582d30993b1117841214 540 Pfam PF12848 ABC transporter 164 227 1.9E-10 T 14-10-2018 IPR032781 ABC-transporter extension domain DB29_02937 932efd6fa121582d30993b1117841214 540 Pfam PF00005 ABC transporter 305 428 2.1E-18 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB29_02906 63cc4f2df10c6bac94e72161f18cce4c 513 SUPERFAMILY SSF51445 31 393 2.11E-103 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily DB29_02906 63cc4f2df10c6bac94e72161f18cce4c 513 SUPERFAMILY SSF51011 374 511 3.96E-27 T 14-10-2018 DB29_02906 63cc4f2df10c6bac94e72161f18cce4c 513 Gene3D G3DSA:2.60.40.1180 29 507 1.0E-197 T 14-10-2018 IPR013780 Glycosyl hydrolase, all-beta DB29_02906 63cc4f2df10c6bac94e72161f18cce4c 513 Pfam PF06964 Alpha-L-arabinofuranosidase C-terminal domain 311 505 1.0E-40 T 14-10-2018 IPR010720 Alpha-L-arabinofuranosidase, C-terminal GO:0046373|GO:0046556 KEGG: 00520+3.2.1.55 DB29_02906 63cc4f2df10c6bac94e72161f18cce4c 513 SMART SM00813 311 505 7.8E-89 T 14-10-2018 IPR010720 Alpha-L-arabinofuranosidase, C-terminal GO:0046373|GO:0046556 KEGG: 00520+3.2.1.55 DB29_02906 63cc4f2df10c6bac94e72161f18cce4c 513 Gene3D G3DSA:3.20.20.80 32 393 1.0E-197 T 14-10-2018 DB29_03550 d1b8a2956512d4d2fc1a2a25ce4fc46b 309 Pfam PF07319 Primosomal protein DnaI N-terminus 1 97 9.9E-27 T 14-10-2018 IPR009928 Primosomal DnaI, N-terminal DB29_03550 d1b8a2956512d4d2fc1a2a25ce4fc46b 309 SMART SM00382 158 284 1.2E-5 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_03550 d1b8a2956512d4d2fc1a2a25ce4fc46b 309 Gene3D G3DSA:3.40.50.300 108 301 9.7E-53 T 14-10-2018 DB29_03550 d1b8a2956512d4d2fc1a2a25ce4fc46b 309 SUPERFAMILY SSF52540 124 272 2.6E-22 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_03550 d1b8a2956512d4d2fc1a2a25ce4fc46b 309 Pfam PF01695 IstB-like ATP binding protein 157 273 1.5E-13 T 14-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 DB29_00057 e80e32be3cde050f6c67914580179fb7 469 PIRSF PIRSF000109 1 469 6.9E-233 T 14-10-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 DB29_00057 e80e32be3cde050f6c67914580179fb7 469 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 178 467 4.8E-134 T 14-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 DB29_00057 e80e32be3cde050f6c67914580179fb7 469 TIGRFAM TIGR00873 gnd: 6-phosphogluconate dehydrogenase (decarboxylating) 5 468 1.2E-219 T 14-10-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 DB29_00057 e80e32be3cde050f6c67914580179fb7 469 Gene3D G3DSA:1.20.5.320 437 469 1.2E-21 T 14-10-2018 DB29_00057 e80e32be3cde050f6c67914580179fb7 469 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 119 144 1.6E-84 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 DB29_00057 e80e32be3cde050f6c67914580179fb7 469 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 167 195 1.6E-84 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 DB29_00057 e80e32be3cde050f6c67914580179fb7 469 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 249 276 1.6E-84 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 DB29_00057 e80e32be3cde050f6c67914580179fb7 469 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 357 379 1.6E-84 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 DB29_00057 e80e32be3cde050f6c67914580179fb7 469 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 66 95 1.6E-84 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 DB29_00057 e80e32be3cde050f6c67914580179fb7 469 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 4 27 1.6E-84 T 14-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 DB29_00057 e80e32be3cde050f6c67914580179fb7 469 ProSitePatterns PS00461 6-phosphogluconate dehydrogenase signature. 253 265 - T 14-10-2018 IPR006184 6-phosphogluconate-binding site GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 DB29_00057 e80e32be3cde050f6c67914580179fb7 469 Gene3D G3DSA:3.40.50.720 1 179 7.3E-58 T 14-10-2018 DB29_00057 e80e32be3cde050f6c67914580179fb7 469 SUPERFAMILY SSF51735 4 176 5.73E-53 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_00057 e80e32be3cde050f6c67914580179fb7 469 SUPERFAMILY SSF48179 176 468 4.9E-131 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 DB29_00057 e80e32be3cde050f6c67914580179fb7 469 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 5 168 1.4E-49 T 14-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 DB29_00057 e80e32be3cde050f6c67914580179fb7 469 Gene3D G3DSA:1.10.1040.10 180 435 4.8E-109 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 DB29_00057 e80e32be3cde050f6c67914580179fb7 469 SMART SM01350 178 468 5.9E-225 T 14-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 DB29_02308 51d07dbc1f3c8e5291ab2018bfc7a01b 394 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 5 389 9.4E-132 T 14-10-2018 IPR002155 Thiolase GO:0016747 DB29_02308 51d07dbc1f3c8e5291ab2018bfc7a01b 394 Gene3D G3DSA:3.40.47.10 125 388 7.4E-139 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 DB29_02308 51d07dbc1f3c8e5291ab2018bfc7a01b 394 Gene3D G3DSA:3.40.47.10 5 275 7.4E-139 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 DB29_02308 51d07dbc1f3c8e5291ab2018bfc7a01b 394 PIRSF PIRSF000429 1 392 1.0E-108 T 14-10-2018 IPR002155 Thiolase GO:0016747 DB29_02308 51d07dbc1f3c8e5291ab2018bfc7a01b 394 ProSitePatterns PS00737 Thiolases signature 2. 338 354 - T 14-10-2018 IPR020613 Thiolase, conserved site GO:0016747 DB29_02308 51d07dbc1f3c8e5291ab2018bfc7a01b 394 SUPERFAMILY SSF53901 271 390 1.22E-34 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 DB29_02308 51d07dbc1f3c8e5291ab2018bfc7a01b 394 Pfam PF02803 Thiolase, C-terminal domain 271 389 5.3E-41 T 14-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 DB29_02308 51d07dbc1f3c8e5291ab2018bfc7a01b 394 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 83 101 - T 14-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 DB29_02308 51d07dbc1f3c8e5291ab2018bfc7a01b 394 ProSitePatterns PS00099 Thiolases active site. 373 386 - T 14-10-2018 IPR020610 Thiolase, active site GO:0016747 DB29_02308 51d07dbc1f3c8e5291ab2018bfc7a01b 394 Pfam PF00108 Thiolase, N-terminal domain 4 261 4.1E-94 T 14-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 DB29_02308 51d07dbc1f3c8e5291ab2018bfc7a01b 394 SUPERFAMILY SSF53901 4 268 2.25E-80 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 DB29_03347 c8de7f29733a9fb2e38bbb28f3f4a63e 264 Hamap MF_00008 Thymidylate synthase [thyA]. 1 264 41.257 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 DB29_03347 c8de7f29733a9fb2e38bbb28f3f4a63e 264 Gene3D G3DSA:3.30.572.10 1 264 2.5E-133 T 14-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 DB29_03347 c8de7f29733a9fb2e38bbb28f3f4a63e 264 PRINTS PR00108 Thymidylate synthase family signature 197 214 4.9E-50 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 DB29_03347 c8de7f29733a9fb2e38bbb28f3f4a63e 264 PRINTS PR00108 Thymidylate synthase family signature 115 134 4.9E-50 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 DB29_03347 c8de7f29733a9fb2e38bbb28f3f4a63e 264 PRINTS PR00108 Thymidylate synthase family signature 42 63 4.9E-50 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 DB29_03347 c8de7f29733a9fb2e38bbb28f3f4a63e 264 PRINTS PR00108 Thymidylate synthase family signature 141 156 4.9E-50 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 DB29_03347 c8de7f29733a9fb2e38bbb28f3f4a63e 264 PRINTS PR00108 Thymidylate synthase family signature 159 185 4.9E-50 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 DB29_03347 c8de7f29733a9fb2e38bbb28f3f4a63e 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 84 264 2.1E-98 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 DB29_03347 c8de7f29733a9fb2e38bbb28f3f4a63e 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 2 85 1.9E-42 T 14-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 DB29_03347 c8de7f29733a9fb2e38bbb28f3f4a63e 264 SUPERFAMILY SSF55831 1 264 1.14E-130 T 14-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 DB29_03347 c8de7f29733a9fb2e38bbb28f3f4a63e 264 ProSitePatterns PS00091 Thymidylate synthase active site. 126 154 - T 14-10-2018 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 DB29_03347 c8de7f29733a9fb2e38bbb28f3f4a63e 264 Pfam PF00303 Thymidylate synthase 2 264 6.7E-129 T 14-10-2018 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 DB29_01506 0ac6d040c16c259867769aa4cf66a67f 212 Pfam PF10067 Predicted membrane protein (DUF2306) 56 202 1.8E-44 T 14-10-2018 IPR018750 Protein of unknown function DUF2306, membrane DB29_01691 26660bc346b2119ac02584f9bae5211f 233 SUPERFAMILY SSF51695 4 211 4.19E-63 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 DB29_01691 26660bc346b2119ac02584f9bae5211f 233 Gene3D G3DSA:3.20.20.190 1 229 1.8E-66 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 DB29_01691 26660bc346b2119ac02584f9bae5211f 233 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 8 213 1.7E-36 T 14-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 DB29_04300 7da2373515eda964752a103ea9c5a750 54 PIRSF PIRSF036698 1 54 5.2E-21 T 14-10-2018 IPR012190 Uncharacterised conserved protein UCP036698, YpmA DB29_04300 7da2373515eda964752a103ea9c5a750 54 Pfam PF14084 Protein of unknown function (DUF4264) 2 54 1.9E-22 T 14-10-2018 IPR012190 Uncharacterised conserved protein UCP036698, YpmA DB29_03660 7a2eb23c11816f31ea68372ad68c3389 491 SUPERFAMILY SSF75304 3 481 1.31E-108 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 DB29_03660 7a2eb23c11816f31ea68372ad68c3389 491 Pfam PF01425 Amidase 40 473 1.4E-73 T 14-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 DB29_03660 7a2eb23c11816f31ea68372ad68c3389 491 Gene3D G3DSA:3.90.1300.10 4 491 8.3E-134 T 14-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 DB29_03660 7a2eb23c11816f31ea68372ad68c3389 491 ProSitePatterns PS00571 Amidases signature. 148 179 - T 14-10-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 DB29_01086 c54b40451ec8292969fc108743a185b4 223 SUPERFAMILY SSF161098 10 208 2.35E-39 T 14-10-2018 IPR035906 MetI-like superfamily DB29_01086 c54b40451ec8292969fc108743a185b4 223 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 35 216 1.1E-20 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DB29_01086 c54b40451ec8292969fc108743a185b4 223 Gene3D G3DSA:1.10.3720.10 1 220 7.9E-49 T 14-10-2018 IPR035906 MetI-like superfamily DB29_01086 c54b40451ec8292969fc108743a185b4 223 TIGRFAM TIGR03004 ectoine_ehuC: ectoine/hydroxyectoine ABC transporter, permease protein EhuC 7 220 6.7E-65 T 14-10-2018 IPR014342 Ectoine/hydroxyectoine ABC transporter, permease protein EhuC DB29_01086 c54b40451ec8292969fc108743a185b4 223 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 9 108 3.6E-25 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 DB29_04221 9abe9e86d578f9eacba15e78590060cb 279 Gene3D G3DSA:1.10.10.1400 72 136 3.1E-20 T 14-10-2018 IPR038713 Terminase small subunit, N-terminal domain superfamily DB29_04221 9abe9e86d578f9eacba15e78590060cb 279 Pfam PF03592 Terminase small subunit 77 246 5.8E-45 T 14-10-2018 IPR005335 Terminase small subunit GO:0006323 DB29_02556 4cd39d51ba32872da375e9a1cae20114 526 SUPERFAMILY SSF53850 44 508 8.87E-122 T 14-10-2018 DB29_02556 4cd39d51ba32872da375e9a1cae20114 526 Gene3D G3DSA:3.90.76.10 80 192 1.8E-121 T 14-10-2018 DB29_02556 4cd39d51ba32872da375e9a1cae20114 526 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 91 440 1.0E-83 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain DB29_02556 4cd39d51ba32872da375e9a1cae20114 526 Gene3D G3DSA:3.40.190.10 55 292 1.8E-121 T 14-10-2018 DB29_02556 4cd39d51ba32872da375e9a1cae20114 526 PIRSF PIRSF002741 6 515 2.3E-112 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 DB29_02556 4cd39d51ba32872da375e9a1cae20114 526 Gene3D G3DSA:3.10.105.10 293 504 1.8E-121 T 14-10-2018 DB29_00384 f3b39ee61b8e38d9e5ec25d47c2e44c8 401 SUPERFAMILY SSF103473 8 390 3.01E-59 T 14-10-2018 IPR036259 MFS transporter superfamily DB29_00384 f3b39ee61b8e38d9e5ec25d47c2e44c8 401 Gene3D G3DSA:1.20.1250.20 4 188 3.8E-39 T 14-10-2018 DB29_00384 f3b39ee61b8e38d9e5ec25d47c2e44c8 401 Pfam PF07690 Major Facilitator Superfamily 19 350 8.6E-40 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DB29_00384 f3b39ee61b8e38d9e5ec25d47c2e44c8 401 Gene3D G3DSA:1.20.1250.20 195 398 1.6E-50 T 14-10-2018 DB29_00372 bc691e418be4bfb6fa64e4adbc53338b 46 Gene3D G3DSA:1.10.287.1100 4 37 4.1E-16 T 14-10-2018 IPR036916 Sporulation inhibitor A superfamily DB29_00372 bc691e418be4bfb6fa64e4adbc53338b 46 Pfam PF08970 Sporulation inhibitor A 1 44 9.6E-20 T 14-10-2018 IPR015064 Sporulation inhibitor A DB29_00372 bc691e418be4bfb6fa64e4adbc53338b 46 SUPERFAMILY SSF100985 1 45 1.83E-16 T 14-10-2018 IPR036916 Sporulation inhibitor A superfamily DB29_03792 1a45bff142e2907a295faca28336dcd9 99 Pfam PF06686 Stage III sporulation protein AC/AD protein family 39 94 5.0E-21 T 14-10-2018 IPR025664 Stage III sporulation protein AC/AD family DB29_03792 1a45bff142e2907a295faca28336dcd9 99 TIGRFAM TIGR02849 spore_III_AD: stage III sporulation protein AD 1 95 1.9E-35 T 14-10-2018 IPR014211 Stage III sporulation protein AD DB29_04081 57dec75754b179a35d662c6170033f7b 478 Gene3D G3DSA:3.40.50.300 5 291 6.4E-25 T 14-10-2018 DB29_04081 57dec75754b179a35d662c6170033f7b 478 Pfam PF13476 AAA domain 8 384 1.9E-12 T 14-10-2018 IPR038729 Rad50/SbcC-type AAA domain DB29_04081 57dec75754b179a35d662c6170033f7b 478 SUPERFAMILY SSF52540 6 201 3.91E-12 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_03810 df7556cbe788802aa25eabfe5973f5de 424 SUPERFAMILY SSF50156 132 195 1.31E-11 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 DB29_03810 df7556cbe788802aa25eabfe5973f5de 424 Pfam PF13180 PDZ domain 131 184 1.8E-7 T 14-10-2018 IPR001478 PDZ domain GO:0005515 DB29_03810 df7556cbe788802aa25eabfe5973f5de 424 Pfam PF05580 SpoIVB peptidase S55 200 409 3.3E-84 T 14-10-2018 IPR008763 Peptidase S55, SpoIVB DB29_03810 df7556cbe788802aa25eabfe5973f5de 424 SMART SM00228 106 182 1.0E-4 T 14-10-2018 IPR001478 PDZ domain GO:0005515 DB29_03810 df7556cbe788802aa25eabfe5973f5de 424 Gene3D G3DSA:2.30.42.10 130 208 5.6E-14 T 14-10-2018 DB29_03810 df7556cbe788802aa25eabfe5973f5de 424 SUPERFAMILY SSF50494 349 406 6.75E-6 T 14-10-2018 IPR009003 Peptidase S1, PA clan DB29_03810 df7556cbe788802aa25eabfe5973f5de 424 TIGRFAM TIGR02860 spore_IV_B: stage IV sporulation protein B 4 415 1.9E-174 T 14-10-2018 IPR014219 Peptidase S55, sporulation stage IV, protein B DB29_01787 d1637b09fab4122e661b58f3ad8cdd7a 202 Gene3D G3DSA:3.40.630.30 1 150 9.6E-19 T 14-10-2018 DB29_01787 d1637b09fab4122e661b58f3ad8cdd7a 202 Pfam PF00583 Acetyltransferase (GNAT) family 25 129 2.1E-10 T 14-10-2018 IPR000182 GNAT domain DB29_01787 d1637b09fab4122e661b58f3ad8cdd7a 202 SUPERFAMILY SSF55729 3 139 2.9E-20 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase DB29_01836 08d40462493bd60aa2f083e34898aa77 105 Gene3D G3DSA:1.10.10.10 10 104 5.4E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_01836 08d40462493bd60aa2f083e34898aa77 105 SUPERFAMILY SSF46785 8 97 3.62E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_01836 08d40462493bd60aa2f083e34898aa77 105 Pfam PF03551 Transcriptional regulator PadR-like family 19 84 3.3E-14 T 14-10-2018 IPR005149 Transcription regulator PadR, N-terminal DB29_01258 57279ae08efcb1c186e9a3a2c77d3337 356 Pfam PF13039 Protein of unknown function (DUF3900) 2 252 3.2E-124 T 14-10-2018 IPR025006 Protein of unknown function DUF3900 DB29_01258 57279ae08efcb1c186e9a3a2c77d3337 356 Pfam PF13037 Domain of unknown function (DUF3898) 259 348 8.7E-39 T 14-10-2018 IPR025012 Domain of unknown function DUF3898 DB29_01914 062f3d65350271ba34dcd1d7c563cbbd 231 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 45.647 T 14-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 DB29_01914 062f3d65350271ba34dcd1d7c563cbbd 231 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 14-10-2018 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB29_01914 062f3d65350271ba34dcd1d7c563cbbd 231 Pfam PF00687 Ribosomal protein L1p/L10e family 30 220 2.5E-60 T 14-10-2018 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein DB29_01914 062f3d65350271ba34dcd1d7c563cbbd 231 PIRSF PIRSF002155 1 227 2.9E-85 T 14-10-2018 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB29_01914 062f3d65350271ba34dcd1d7c563cbbd 231 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 227 1.1E-108 T 14-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 DB29_01914 062f3d65350271ba34dcd1d7c563cbbd 231 SUPERFAMILY SSF56808 6 224 3.53E-88 T 14-10-2018 IPR023674 Ribosomal protein L1-like DB29_01914 062f3d65350271ba34dcd1d7c563cbbd 231 Gene3D G3DSA:3.40.50.790 68 159 4.0E-88 T 14-10-2018 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich DB29_01914 062f3d65350271ba34dcd1d7c563cbbd 231 Gene3D G3DSA:3.30.190.20 24 224 4.0E-88 T 14-10-2018 DB29_04372 c8ffbbefd584dc0c3aa698b59c61bca3 656 ProSitePatterns PS00177 DNA topoisomerase II signature. 428 436 - T 14-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 DB29_04372 c8ffbbefd584dc0c3aa698b59c61bca3 656 Gene3D G3DSA:3.30.230.10 223 404 3.1E-68 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DB29_04372 c8ffbbefd584dc0c3aa698b59c61bca3 656 TIGRFAM TIGR01058 parE_Gpos: DNA topoisomerase IV, B subunit 4 644 0.0 T 14-10-2018 IPR005740 DNA topoisomerase 4 subunit B, Firmicutes/Mollicutes GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 DB29_04372 c8ffbbefd584dc0c3aa698b59c61bca3 656 Gene3D G3DSA:3.40.50.670 412 644 7.1E-101 T 14-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 DB29_04372 c8ffbbefd584dc0c3aa698b59c61bca3 656 Hamap MF_00939 DNA topoisomerase 4 subunit B [parE]. 6 640 47.245 T 14-10-2018 IPR005740 DNA topoisomerase 4 subunit B, Firmicutes/Mollicutes GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 DB29_04372 c8ffbbefd584dc0c3aa698b59c61bca3 656 SMART SM00433 37 635 0.0 T 14-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 DB29_04372 c8ffbbefd584dc0c3aa698b59c61bca3 656 PRINTS PR00418 DNA topoisomerase II family signature 37 52 2.4E-70 T 14-10-2018 DB29_04372 c8ffbbefd584dc0c3aa698b59c61bca3 656 PRINTS PR00418 DNA topoisomerase II family signature 114 128 2.4E-70 T 14-10-2018 DB29_04372 c8ffbbefd584dc0c3aa698b59c61bca3 656 PRINTS PR00418 DNA topoisomerase II family signature 270 283 2.4E-70 T 14-10-2018 DB29_04372 c8ffbbefd584dc0c3aa698b59c61bca3 656 PRINTS PR00418 DNA topoisomerase II family signature 530 542 2.4E-70 T 14-10-2018 DB29_04372 c8ffbbefd584dc0c3aa698b59c61bca3 656 PRINTS PR00418 DNA topoisomerase II family signature 492 508 2.4E-70 T 14-10-2018 DB29_04372 c8ffbbefd584dc0c3aa698b59c61bca3 656 PRINTS PR00418 DNA topoisomerase II family signature 510 527 2.4E-70 T 14-10-2018 DB29_04372 c8ffbbefd584dc0c3aa698b59c61bca3 656 PRINTS PR00418 DNA topoisomerase II family signature 72 85 2.4E-70 T 14-10-2018 DB29_04372 c8ffbbefd584dc0c3aa698b59c61bca3 656 PRINTS PR00418 DNA topoisomerase II family signature 574 590 2.4E-70 T 14-10-2018 DB29_04372 c8ffbbefd584dc0c3aa698b59c61bca3 656 PRINTS PR00418 DNA topoisomerase II family signature 426 440 2.4E-70 T 14-10-2018 DB29_04372 c8ffbbefd584dc0c3aa698b59c61bca3 656 SUPERFAMILY SSF54211 224 395 2.09E-51 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DB29_04372 c8ffbbefd584dc0c3aa698b59c61bca3 656 Gene3D G3DSA:3.30.565.10 5 222 3.5E-87 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB29_04372 c8ffbbefd584dc0c3aa698b59c61bca3 656 SUPERFAMILY SSF56719 400 635 3.4E-85 T 14-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 DB29_04372 c8ffbbefd584dc0c3aa698b59c61bca3 656 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 572 631 2.7E-29 T 14-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 DB29_04372 c8ffbbefd584dc0c3aa698b59c61bca3 656 Pfam PF00204 DNA gyrase B 224 394 2.1E-55 T 14-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 DB29_04372 c8ffbbefd584dc0c3aa698b59c61bca3 656 PRINTS PR01159 DNA gyrase subunit B signature 476 485 1.9E-58 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 DB29_04372 c8ffbbefd584dc0c3aa698b59c61bca3 656 PRINTS PR01159 DNA gyrase subunit B signature 611 627 1.9E-58 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 DB29_04372 c8ffbbefd584dc0c3aa698b59c61bca3 656 PRINTS PR01159 DNA gyrase subunit B signature 595 607 1.9E-58 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 DB29_04372 c8ffbbefd584dc0c3aa698b59c61bca3 656 PRINTS PR01159 DNA gyrase subunit B signature 182 197 1.9E-58 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 DB29_04372 c8ffbbefd584dc0c3aa698b59c61bca3 656 PRINTS PR01159 DNA gyrase subunit B signature 223 245 1.9E-58 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 DB29_04372 c8ffbbefd584dc0c3aa698b59c61bca3 656 PRINTS PR01159 DNA gyrase subunit B signature 314 330 1.9E-58 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 DB29_04372 c8ffbbefd584dc0c3aa698b59c61bca3 656 PRINTS PR01159 DNA gyrase subunit B signature 364 378 1.9E-58 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 DB29_04372 c8ffbbefd584dc0c3aa698b59c61bca3 656 PRINTS PR01159 DNA gyrase subunit B signature 8 18 1.9E-58 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 DB29_04372 c8ffbbefd584dc0c3aa698b59c61bca3 656 PRINTS PR01159 DNA gyrase subunit B signature 378 398 1.9E-58 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 DB29_04372 c8ffbbefd584dc0c3aa698b59c61bca3 656 PRINTS PR01159 DNA gyrase subunit B signature 197 210 1.9E-58 T 14-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 DB29_04372 c8ffbbefd584dc0c3aa698b59c61bca3 656 SMART SM00387 33 177 7.3E-29 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DB29_04372 c8ffbbefd584dc0c3aa698b59c61bca3 656 SUPERFAMILY SSF55874 7 216 3.29E-66 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB29_04372 c8ffbbefd584dc0c3aa698b59c61bca3 656 Pfam PF01751 Toprim domain 425 533 3.1E-18 T 14-10-2018 IPR006171 TOPRIM domain DB29_04372 c8ffbbefd584dc0c3aa698b59c61bca3 656 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 33 176 8.1E-23 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DB29_00385 72dd22525ed29687ca1d7806478afaeb 719 Gene3D G3DSA:3.40.50.740 83 549 1.8E-162 T 14-10-2018 DB29_00385 72dd22525ed29687ca1d7806478afaeb 719 SMART SM00926 16 72 1.3E-6 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DB29_00385 72dd22525ed29687ca1d7806478afaeb 719 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 446 463 - T 14-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 DB29_00385 72dd22525ed29687ca1d7806478afaeb 719 Gene3D G3DSA:3.40.228.10 153 352 1.8E-162 T 14-10-2018 DB29_00385 72dd22525ed29687ca1d7806478afaeb 719 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 18 69 1.4E-8 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DB29_00385 72dd22525ed29687ca1d7806478afaeb 719 Pfam PF00384 Molybdopterin oxidoreductase 75 500 6.4E-87 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DB29_00385 72dd22525ed29687ca1d7806478afaeb 719 Gene3D G3DSA:2.40.40.20 584 707 2.6E-36 T 14-10-2018 DB29_00385 72dd22525ed29687ca1d7806478afaeb 719 SUPERFAMILY SSF53706 18 596 2.75E-172 T 14-10-2018 DB29_00385 72dd22525ed29687ca1d7806478afaeb 719 Gene3D G3DSA:2.20.25.90 19 71 9.6E-9 T 14-10-2018 DB29_00385 72dd22525ed29687ca1d7806478afaeb 719 Pfam PF01568 Molydopterin dinucleotide binding domain 594 699 2.8E-27 T 14-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 DB29_00385 72dd22525ed29687ca1d7806478afaeb 719 SUPERFAMILY SSF50692 547 706 5.65E-38 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily DB29_00465 a588c5d85f2631a2126823ffc360bdc7 199 SUPERFAMILY SSF47781 65 136 5.56E-21 T 14-10-2018 IPR010994 RuvA domain 2-like DB29_00465 a588c5d85f2631a2126823ffc360bdc7 199 SMART SM00278 107 126 0.97 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 DB29_00465 a588c5d85f2631a2126823ffc360bdc7 199 SMART SM00278 72 91 0.049 T 14-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 DB29_00465 a588c5d85f2631a2126823ffc360bdc7 199 Pfam PF14520 Helix-hairpin-helix domain 71 128 6.8E-16 T 14-10-2018 DB29_00465 a588c5d85f2631a2126823ffc360bdc7 199 SUPERFAMILY SSF46929 150 195 1.83E-9 T 14-10-2018 IPR036267 RuvA, C-terminal domain superfamily DB29_00465 a588c5d85f2631a2126823ffc360bdc7 199 Pfam PF07499 RuvA, C-terminal domain 152 195 8.6E-12 T 14-10-2018 IPR011114 Holliday junction DNA helicase RuvA, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 DB29_00465 a588c5d85f2631a2126823ffc360bdc7 199 Gene3D G3DSA:1.10.150.20 66 138 4.2E-25 T 14-10-2018 DB29_00465 a588c5d85f2631a2126823ffc360bdc7 199 Pfam PF01330 RuvA N terminal domain 2 61 3.2E-16 T 14-10-2018 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 DB29_00465 a588c5d85f2631a2126823ffc360bdc7 199 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 196 28.947 T 14-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 DB29_00465 a588c5d85f2631a2126823ffc360bdc7 199 Gene3D G3DSA:2.40.50.140 1 63 9.4E-15 T 14-10-2018 DB29_00465 a588c5d85f2631a2126823ffc360bdc7 199 SUPERFAMILY SSF50249 2 62 3.08E-14 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DB29_00465 a588c5d85f2631a2126823ffc360bdc7 199 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 195 2.8E-52 T 14-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 DB29_00465 a588c5d85f2631a2126823ffc360bdc7 199 Gene3D G3DSA:1.10.8.10 148 195 2.1E-5 T 14-10-2018 DB29_00359 3fcd8885e6136bf75d7d630b17c0de0c 768 Gene3D G3DSA:3.60.15.10 498 764 4.7E-66 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DB29_00359 3fcd8885e6136bf75d7d630b17c0de0c 768 TIGRFAM TIGR00361 ComEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 79 748 7.4E-117 T 14-10-2018 IPR004797 Competence protein ComEC/Rec2 GO:0016021|GO:0030420 DB29_00359 3fcd8885e6136bf75d7d630b17c0de0c 768 Pfam PF13567 Domain of unknown function (DUF4131) 24 169 9.0E-22 T 14-10-2018 IPR025405 Domain of unknown function DUF4131 DB29_00359 3fcd8885e6136bf75d7d630b17c0de0c 768 Pfam PF03772 Competence protein 211 471 1.0E-63 T 14-10-2018 IPR004477 ComEC/Rec2-related protein DB29_00359 3fcd8885e6136bf75d7d630b17c0de0c 768 SMART SM00849 510 719 4.7E-10 T 14-10-2018 IPR001279 Metallo-beta-lactamase DB29_00359 3fcd8885e6136bf75d7d630b17c0de0c 768 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 232 402 3.2E-33 T 14-10-2018 IPR004477 ComEC/Rec2-related protein DB29_00359 3fcd8885e6136bf75d7d630b17c0de0c 768 Pfam PF00753 Metallo-beta-lactamase superfamily 508 718 7.1E-19 T 14-10-2018 IPR001279 Metallo-beta-lactamase DB29_00359 3fcd8885e6136bf75d7d630b17c0de0c 768 SUPERFAMILY SSF56281 502 761 1.31E-47 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DB29_00490 fd3bef7b97db225fcb306f371c8004c0 141 Pfam PF01230 HIT domain 13 107 6.6E-26 T 14-10-2018 IPR001310 Histidine triad (HIT) protein DB29_00490 fd3bef7b97db225fcb306f371c8004c0 141 PRINTS PR00332 Histidine triad family signature 6 22 3.6E-17 T 14-10-2018 IPR001310 Histidine triad (HIT) protein DB29_00490 fd3bef7b97db225fcb306f371c8004c0 141 PRINTS PR00332 Histidine triad family signature 27 45 3.6E-17 T 14-10-2018 IPR001310 Histidine triad (HIT) protein DB29_00490 fd3bef7b97db225fcb306f371c8004c0 141 PRINTS PR00332 Histidine triad family signature 94 104 3.6E-17 T 14-10-2018 IPR001310 Histidine triad (HIT) protein DB29_00490 fd3bef7b97db225fcb306f371c8004c0 141 ProSitePatterns PS00892 HIT domain signature. 87 105 - T 14-10-2018 IPR019808 Histidine triad, conserved site DB29_00490 fd3bef7b97db225fcb306f371c8004c0 141 Gene3D G3DSA:3.30.428.10 1 140 1.9E-45 T 14-10-2018 IPR036265 HIT-like superfamily DB29_00490 fd3bef7b97db225fcb306f371c8004c0 141 SUPERFAMILY SSF54197 1 137 8.82E-43 T 14-10-2018 IPR036265 HIT-like superfamily DB29_01190 8bf3aadda996543aedf005bb962fba6b 143 SMART SM00387 34 138 9.8E-8 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DB29_01190 8bf3aadda996543aedf005bb962fba6b 143 SUPERFAMILY SSF55874 25 133 2.33E-14 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB29_01190 8bf3aadda996543aedf005bb962fba6b 143 Gene3D G3DSA:3.30.565.10 4 141 6.8E-18 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB29_01190 8bf3aadda996543aedf005bb962fba6b 143 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 35 133 3.9E-9 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DB29_00087 3675d1ce4e05fe2f48dab3ee9b9b4157 255 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 42 60 - T 14-10-2018 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48 DB29_00087 3675d1ce4e05fe2f48dab3ee9b9b4157 255 SUPERFAMILY SSF51366 14 249 9.42E-77 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 DB29_00087 3675d1ce4e05fe2f48dab3ee9b9b4157 255 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 1 249 31.694 T 14-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 DB29_00087 3675d1ce4e05fe2f48dab3ee9b9b4157 255 Gene3D G3DSA:3.20.20.70 1 254 3.9E-91 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DB29_00087 3675d1ce4e05fe2f48dab3ee9b9b4157 255 Pfam PF00218 Indole-3-glycerol phosphate synthase 7 246 3.2E-84 T 14-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 DB29_03518 2e3fc20082ad4113f05021cf0112f31b 369 Gene3D G3DSA:3.40.350.10 3 137 8.2E-28 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal DB29_03518 2e3fc20082ad4113f05021cf0112f31b 369 Gene3D G3DSA:3.90.230.10 140 363 3.6E-79 T 14-10-2018 DB29_03518 2e3fc20082ad4113f05021cf0112f31b 369 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 295 307 - T 14-10-2018 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site DB29_03518 2e3fc20082ad4113f05021cf0112f31b 369 Pfam PF00557 Metallopeptidase family M24 148 349 9.1E-64 T 14-10-2018 IPR000994 Peptidase M24 DB29_03518 2e3fc20082ad4113f05021cf0112f31b 369 Pfam PF01321 Creatinase/Prolidase N-terminal domain 5 138 2.3E-23 T 14-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 DB29_03518 2e3fc20082ad4113f05021cf0112f31b 369 SUPERFAMILY SSF53092 4 137 1.06E-24 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal DB29_03518 2e3fc20082ad4113f05021cf0112f31b 369 SUPERFAMILY SSF55920 141 365 2.09E-74 T 14-10-2018 IPR036005 Creatinase/aminopeptidase-like DB29_00858 002b938350b5cd9b8ff0a8c1d5eeb2ad 493 Gene3D G3DSA:3.40.50.12740 3 156 2.2E-36 T 14-10-2018 DB29_00858 002b938350b5cd9b8ff0a8c1d5eeb2ad 493 SUPERFAMILY SSF52172 1 142 1.14E-36 T 14-10-2018 IPR011006 CheY-like superfamily DB29_00858 002b938350b5cd9b8ff0a8c1d5eeb2ad 493 Pfam PF12833 Helix-turn-helix domain 415 491 2.0E-17 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DB29_00858 002b938350b5cd9b8ff0a8c1d5eeb2ad 493 Gene3D G3DSA:1.10.10.60 389 440 9.1E-13 T 14-10-2018 DB29_00858 002b938350b5cd9b8ff0a8c1d5eeb2ad 493 SUPERFAMILY SSF46689 444 492 1.08E-10 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DB29_00858 002b938350b5cd9b8ff0a8c1d5eeb2ad 493 SUPERFAMILY SSF46689 392 441 3.76E-5 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DB29_00858 002b938350b5cd9b8ff0a8c1d5eeb2ad 493 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 445 486 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 DB29_00858 002b938350b5cd9b8ff0a8c1d5eeb2ad 493 Gene3D G3DSA:1.10.10.60 441 493 5.1E-16 T 14-10-2018 DB29_00858 002b938350b5cd9b8ff0a8c1d5eeb2ad 493 SMART SM00342 408 490 1.5E-24 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DB29_00858 002b938350b5cd9b8ff0a8c1d5eeb2ad 493 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 459 474 4.8E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DB29_00858 002b938350b5cd9b8ff0a8c1d5eeb2ad 493 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 474 490 4.8E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DB29_00858 002b938350b5cd9b8ff0a8c1d5eeb2ad 493 Pfam PF00072 Response regulator receiver domain 4 116 5.3E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DB29_00858 002b938350b5cd9b8ff0a8c1d5eeb2ad 493 SMART SM00448 2 116 1.4E-30 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DB29_01814 bfa4cab52ed1a451fd6e4c984a4a09a1 224 SUPERFAMILY SSF52172 3 124 2.99E-32 T 14-10-2018 IPR011006 CheY-like superfamily DB29_01814 bfa4cab52ed1a451fd6e4c984a4a09a1 224 Gene3D G3DSA:3.40.50.2300 1 121 1.6E-29 T 14-10-2018 DB29_01814 bfa4cab52ed1a451fd6e4c984a4a09a1 224 Gene3D G3DSA:1.10.10.10 125 223 8.7E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_01814 bfa4cab52ed1a451fd6e4c984a4a09a1 224 SMART SM00862 144 219 3.9E-16 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DB29_01814 bfa4cab52ed1a451fd6e4c984a4a09a1 224 SMART SM00448 2 112 2.7E-33 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DB29_01814 bfa4cab52ed1a451fd6e4c984a4a09a1 224 SUPERFAMILY SSF46894 120 219 9.92E-23 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DB29_01814 bfa4cab52ed1a451fd6e4c984a4a09a1 224 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 219 3.1E-19 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DB29_01814 bfa4cab52ed1a451fd6e4c984a4a09a1 224 Pfam PF00072 Response regulator receiver domain 4 113 1.7E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DB29_03152 982a3d6145dca37849f6936ccd445f8b 154 SUPERFAMILY SSF56112 6 101 1.83E-13 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily DB29_03152 982a3d6145dca37849f6936ccd445f8b 154 Gene3D G3DSA:1.10.510.10 46 101 1.7E-5 T 14-10-2018 DB29_03152 982a3d6145dca37849f6936ccd445f8b 154 Gene3D G3DSA:3.30.200.20 29 45 1.7E-5 T 14-10-2018 DB29_04146 3ff7de3b08ed2ad5bfa2388fa6daf4e7 103 Pfam PF01521 Iron-sulphur cluster biosynthesis 1 98 6.0E-7 T 14-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 DB29_04146 3ff7de3b08ed2ad5bfa2388fa6daf4e7 103 SUPERFAMILY SSF89360 1 87 3.79E-11 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 DB29_04146 3ff7de3b08ed2ad5bfa2388fa6daf4e7 103 PIRSF PIRSF034852 1 97 1.7E-36 T 14-10-2018 IPR008326 Uncharacterised conserved protein UCP034852 DB29_03789 78493cb3c332830cad65d5dc7987294e 309 Gene3D G3DSA:3.40.50.300 108 289 2.1E-23 T 14-10-2018 DB29_03789 78493cb3c332830cad65d5dc7987294e 309 SMART SM00382 142 291 3.8E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_03789 78493cb3c332830cad65d5dc7987294e 309 SUPERFAMILY SSF52540 55 271 4.77E-21 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_03789 78493cb3c332830cad65d5dc7987294e 309 TIGRFAM TIGR02858 spore_III_AA: stage III sporulation protein AA 29 300 4.8E-129 T 14-10-2018 IPR014217 Sporulation stage III, protein AA DB29_00004 91f940832b3dc1c21b414e5e0293f35b 317 Gene3D G3DSA:3.40.50.1820 3 295 8.6E-51 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DB29_00004 91f940832b3dc1c21b414e5e0293f35b 317 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 95 109 6.7E-9 T 14-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 DB29_00004 91f940832b3dc1c21b414e5e0293f35b 317 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 52 63 6.7E-9 T 14-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 DB29_00004 91f940832b3dc1c21b414e5e0293f35b 317 PRINTS PR00793 Prolyl aminopeptidase (S33) family signature 24 32 6.7E-9 T 14-10-2018 IPR002410 Peptidase S33 GO:0006508|GO:0008233 KEGG: 00330+3.4.11.5 DB29_00004 91f940832b3dc1c21b414e5e0293f35b 317 SUPERFAMILY SSF53474 6 293 2.77E-50 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DB29_00004 91f940832b3dc1c21b414e5e0293f35b 317 Pfam PF00561 alpha/beta hydrolase fold 22 278 2.3E-26 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DB29_02978 dad32f6a61b1dbff3103cbe3307a180d 301 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 97 291 2.5E-18 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DB29_02978 dad32f6a61b1dbff3103cbe3307a180d 301 SUPERFAMILY SSF161098 64 292 2.62E-65 T 14-10-2018 IPR035906 MetI-like superfamily DB29_02978 dad32f6a61b1dbff3103cbe3307a180d 301 Gene3D G3DSA:1.10.3720.10 60 299 2.8E-74 T 14-10-2018 IPR035906 MetI-like superfamily DB29_01816 fc9b5610dd990ae620d9b8f7d303c2ae 390 SUPERFAMILY SSF53756 1 386 2.08E-77 T 14-10-2018 DB29_01816 fc9b5610dd990ae620d9b8f7d303c2ae 390 TIGRFAM TIGR01426 MGT: glycosyltransferase, MGT family 7 386 1.1E-102 T 14-10-2018 IPR006326 UDP-glycosyltransferase, MGT GO:0016758|GO:0016999 DB29_01816 fc9b5610dd990ae620d9b8f7d303c2ae 390 Gene3D G3DSA:3.40.50.2000 6 385 1.1E-121 T 14-10-2018 DB29_01816 fc9b5610dd990ae620d9b8f7d303c2ae 390 Pfam PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 229 370 6.9E-14 T 14-10-2018 IPR002213 UDP-glucuronosyl/UDP-glucosyltransferase GO:0016758 Reactome: R-HSA-156588 DB29_01816 fc9b5610dd990ae620d9b8f7d303c2ae 390 Gene3D G3DSA:3.40.50.2000 217 374 1.1E-121 T 14-10-2018 DB29_01433 a0bdd4c91968e038afa6f1457c16665e 218 SUPERFAMILY SSF50800 5 215 1.26E-65 T 14-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily DB29_01433 a0bdd4c91968e038afa6f1457c16665e 218 Pfam PF03475 3-alpha domain 173 215 1.0E-13 T 14-10-2018 IPR005163 3-alpha domain DB29_01433 a0bdd4c91968e038afa6f1457c16665e 218 Gene3D G3DSA:2.40.33.20 2 218 6.8E-68 T 14-10-2018 DB29_01433 a0bdd4c91968e038afa6f1457c16665e 218 Pfam PF03473 MOSC domain 53 163 1.2E-21 T 14-10-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 DB29_00849 1f4d112e4070e1be35675999660317c8 292 Pfam PF02311 AraC-like ligand binding domain 30 153 1.2E-8 T 14-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 DB29_00849 1f4d112e4070e1be35675999660317c8 292 SMART SM00342 195 278 6.9E-29 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DB29_00849 1f4d112e4070e1be35675999660317c8 292 Pfam PF12833 Helix-turn-helix domain 201 279 4.8E-21 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DB29_00849 1f4d112e4070e1be35675999660317c8 292 SUPERFAMILY SSF46689 181 229 7.97E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DB29_00849 1f4d112e4070e1be35675999660317c8 292 SUPERFAMILY SSF46689 231 282 1.36E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DB29_00849 1f4d112e4070e1be35675999660317c8 292 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 232 274 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 DB29_00849 1f4d112e4070e1be35675999660317c8 292 SUPERFAMILY SSF51215 21 155 5.89E-16 T 14-10-2018 IPR037923 Transcription regulator HTH-like DB29_00849 1f4d112e4070e1be35675999660317c8 292 Gene3D G3DSA:1.10.10.60 176 228 1.1E-17 T 14-10-2018 DB29_00849 1f4d112e4070e1be35675999660317c8 292 Gene3D G3DSA:1.10.10.60 229 282 3.2E-16 T 14-10-2018 DB29_02842 738f6581dfb0335392270506abbf25eb 261 Pfam PF08241 Methyltransferase domain 43 132 1.5E-23 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 DB29_02842 738f6581dfb0335392270506abbf25eb 261 Gene3D G3DSA:3.40.50.150 22 258 9.5E-69 T 14-10-2018 DB29_02842 738f6581dfb0335392270506abbf25eb 261 SUPERFAMILY SSF53335 8 220 8.44E-42 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DB29_02411 c9211738a8554151791ffe1f30e0044f 477 Gene3D G3DSA:3.20.20.80 1 477 8.3E-152 T 14-10-2018 DB29_02411 c9211738a8554151791ffe1f30e0044f 477 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 10 24 - T 14-10-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site DB29_02411 c9211738a8554151791ffe1f30e0044f 477 Pfam PF00232 Glycosyl hydrolase family 1 5 474 8.8E-137 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DB29_02411 c9211738a8554151791ffe1f30e0044f 477 PRINTS PR00131 Glycosyl hydrolase family 1 signature 393 404 1.3E-16 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DB29_02411 c9211738a8554151791ffe1f30e0044f 477 PRINTS PR00131 Glycosyl hydrolase family 1 signature 439 451 1.3E-16 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DB29_02411 c9211738a8554151791ffe1f30e0044f 477 PRINTS PR00131 Glycosyl hydrolase family 1 signature 372 380 1.3E-16 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DB29_02411 c9211738a8554151791ffe1f30e0044f 477 PRINTS PR00131 Glycosyl hydrolase family 1 signature 414 431 1.3E-16 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DB29_02411 c9211738a8554151791ffe1f30e0044f 477 PRINTS PR00131 Glycosyl hydrolase family 1 signature 305 319 1.3E-16 T 14-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 DB29_02411 c9211738a8554151791ffe1f30e0044f 477 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 372 380 - T 14-10-2018 IPR018120 Glycoside hydrolase family 1, active site DB29_02411 c9211738a8554151791ffe1f30e0044f 477 SUPERFAMILY SSF51445 2 470 1.62E-158 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily DB29_01082 c71a0a08cd86ed6f41044d14b80d58a6 539 Pfam PF17203 Single cache domain 3 44 177 1.7E-25 T 14-10-2018 IPR033463 Single cache domain 3 DB29_01082 c71a0a08cd86ed6f41044d14b80d58a6 539 Gene3D G3DSA:3.30.450.20 207 322 3.8E-22 T 14-10-2018 DB29_01082 c71a0a08cd86ed6f41044d14b80d58a6 539 SUPERFAMILY SSF55890 331 400 6.67E-14 T 14-10-2018 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB GO:0000155|GO:0000160|GO:0016772 DB29_01082 c71a0a08cd86ed6f41044d14b80d58a6 539 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 330 381 2.9E-12 T 14-10-2018 IPR039506 SpoOB, alpha-helical domain DB29_01082 c71a0a08cd86ed6f41044d14b80d58a6 539 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 431 534 1.5E-18 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DB29_01082 c71a0a08cd86ed6f41044d14b80d58a6 539 SUPERFAMILY SSF55874 405 532 1.83E-27 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB29_01082 c71a0a08cd86ed6f41044d14b80d58a6 539 SMART SM00387 427 535 6.6E-22 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DB29_01082 c71a0a08cd86ed6f41044d14b80d58a6 539 SUPERFAMILY SSF55785 231 331 1.43E-7 T 14-10-2018 IPR035965 PAS domain superfamily DB29_01082 c71a0a08cd86ed6f41044d14b80d58a6 539 Gene3D G3DSA:3.30.565.10 381 534 1.0E-27 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB29_01082 c71a0a08cd86ed6f41044d14b80d58a6 539 PRINTS PR00344 Bacterial sensor protein C-terminal signature 466 480 5.6E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB29_01082 c71a0a08cd86ed6f41044d14b80d58a6 539 PRINTS PR00344 Bacterial sensor protein C-terminal signature 519 532 5.6E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB29_01082 c71a0a08cd86ed6f41044d14b80d58a6 539 PRINTS PR00344 Bacterial sensor protein C-terminal signature 495 513 5.6E-9 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB29_01082 c71a0a08cd86ed6f41044d14b80d58a6 539 SUPERFAMILY SSF103190 46 175 1.02E-36 T 14-10-2018 IPR029151 Periplasmic sensor-like domain superfamily DB29_01082 c71a0a08cd86ed6f41044d14b80d58a6 539 Pfam PF00989 PAS fold 220 320 3.7E-7 T 14-10-2018 IPR013767 PAS fold GO:0006355 DB29_01082 c71a0a08cd86ed6f41044d14b80d58a6 539 Gene3D G3DSA:3.30.450.20 40 179 6.0E-43 T 14-10-2018 DB29_01591 7c865e8f85a3bc0674d922176f0efab6 451 Pfam PF00158 Sigma-54 interaction domain 137 304 3.3E-67 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 DB29_01591 7c865e8f85a3bc0674d922176f0efab6 451 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 351 360 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site DB29_01591 7c865e8f85a3bc0674d922176f0efab6 451 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 224 239 - T 14-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 DB29_01591 7c865e8f85a3bc0674d922176f0efab6 451 SMART SM00382 157 301 6.3E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_01591 7c865e8f85a3bc0674d922176f0efab6 451 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 5 56 1.1E-6 T 14-10-2018 IPR000014 PAS domain DB29_01591 7c865e8f85a3bc0674d922176f0efab6 451 Pfam PF00989 PAS fold 4 92 3.2E-9 T 14-10-2018 IPR013767 PAS fold GO:0006355 DB29_01591 7c865e8f85a3bc0674d922176f0efab6 451 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 161 174 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 DB29_01591 7c865e8f85a3bc0674d922176f0efab6 451 Gene3D G3DSA:3.30.450.20 4 104 1.9E-17 T 14-10-2018 DB29_01591 7c865e8f85a3bc0674d922176f0efab6 451 SMART SM00091 1 68 5.7E-4 T 14-10-2018 IPR000014 PAS domain DB29_01591 7c865e8f85a3bc0674d922176f0efab6 451 SUPERFAMILY SSF46689 351 451 2.66E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DB29_01591 7c865e8f85a3bc0674d922176f0efab6 451 SUPERFAMILY SSF52540 136 382 1.46E-69 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_01591 7c865e8f85a3bc0674d922176f0efab6 451 Gene3D G3DSA:3.40.50.300 123 308 5.1E-64 T 14-10-2018 DB29_01591 7c865e8f85a3bc0674d922176f0efab6 451 Pfam PF02954 Bacterial regulatory protein, Fis family 406 449 2.0E-9 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DB29_01591 7c865e8f85a3bc0674d922176f0efab6 451 Gene3D G3DSA:1.10.10.60 405 451 4.2E-13 T 14-10-2018 DB29_01591 7c865e8f85a3bc0674d922176f0efab6 451 Gene3D G3DSA:1.10.8.60 309 387 8.0E-22 T 14-10-2018 DB29_01591 7c865e8f85a3bc0674d922176f0efab6 451 SUPERFAMILY SSF55785 5 95 1.17E-13 T 14-10-2018 IPR035965 PAS domain superfamily DB29_00948 dac03381659a21fe54b191878227677f 250 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 DB29_00948 dac03381659a21fe54b191878227677f 250 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 247 4.4E-59 T 14-10-2018 DB29_00948 dac03381659a21fe54b191878227677f 250 Gene3D G3DSA:3.40.50.720 1 249 1.7E-72 T 14-10-2018 DB29_00948 dac03381659a21fe54b191878227677f 250 SUPERFAMILY SSF51735 6 248 1.32E-72 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_00948 dac03381659a21fe54b191878227677f 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 6.3E-42 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_00948 dac03381659a21fe54b191878227677f 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 211 231 6.3E-42 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_00948 dac03381659a21fe54b191878227677f 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 6.3E-42 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_00948 dac03381659a21fe54b191878227677f 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 6.3E-42 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_00948 dac03381659a21fe54b191878227677f 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 6.3E-42 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_00948 dac03381659a21fe54b191878227677f 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 6.3E-42 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_00948 dac03381659a21fe54b191878227677f 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 9.8E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_00948 dac03381659a21fe54b191878227677f 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 9.8E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_00948 dac03381659a21fe54b191878227677f 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 9.8E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_00198 ef5a9c55906fa20a70690233b062a8d6 334 SUPERFAMILY SSF53901 55 316 1.03E-12 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 DB29_00198 ef5a9c55906fa20a70690233b062a8d6 334 Pfam PF07451 Stage V sporulation protein AD (SpoVAD) 5 331 7.0E-143 T 14-10-2018 IPR010894 Stage V sporulation AD DB29_00198 ef5a9c55906fa20a70690233b062a8d6 334 Gene3D G3DSA:3.40.47.40 2 334 2.1E-141 T 14-10-2018 IPR038369 Stage V sporulation AD superfamily DB29_00198 ef5a9c55906fa20a70690233b062a8d6 334 TIGRFAM TIGR02845 spore_V_AD: stage V sporulation protein AD 5 331 8.0E-162 T 14-10-2018 IPR010894 Stage V sporulation AD DB29_00198 ef5a9c55906fa20a70690233b062a8d6 334 PIRSF PIRSF011570 1 334 1.2E-163 T 14-10-2018 IPR010894 Stage V sporulation AD DB29_03906 a4f8ea1b4f22432e5c0d9274f227e2dc 540 PIRSF PIRSF012535 1 539 1.3E-165 T 14-10-2018 IPR011199 Bacillithiol biosynthesis BshC DB29_03906 a4f8ea1b4f22432e5c0d9274f227e2dc 540 TIGRFAM TIGR03998 thiol_BshC: bacillithiol biosynthesis cysteine-adding enzyme BshC 12 537 2.9E-194 T 14-10-2018 IPR011199 Bacillithiol biosynthesis BshC DB29_03906 a4f8ea1b4f22432e5c0d9274f227e2dc 540 Hamap MF_01867 Putative cysteine ligase BshC [bshC]. 1 540 29.944 T 14-10-2018 IPR011199 Bacillithiol biosynthesis BshC DB29_03906 a4f8ea1b4f22432e5c0d9274f227e2dc 540 Pfam PF10079 Bacillithiol biosynthesis BshC 1 536 3.9E-162 T 14-10-2018 IPR011199 Bacillithiol biosynthesis BshC DB29_00111 ec97dffe85c3b135dfe16004f98f12f7 384 Gene3D G3DSA:2.40.50.140 3 95 6.6E-22 T 14-10-2018 DB29_00111 ec97dffe85c3b135dfe16004f98f12f7 384 Gene3D G3DSA:2.40.50.140 96 182 3.7E-13 T 14-10-2018 DB29_00111 ec97dffe85c3b135dfe16004f98f12f7 384 SUPERFAMILY SSF50249 187 274 5.63E-28 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DB29_00111 ec97dffe85c3b135dfe16004f98f12f7 384 SMART SM00316 272 343 1.5E-24 T 14-10-2018 IPR022967 RNA-binding domain, S1 DB29_00111 ec97dffe85c3b135dfe16004f98f12f7 384 SMART SM00316 16 85 8.0E-19 T 14-10-2018 IPR022967 RNA-binding domain, S1 DB29_00111 ec97dffe85c3b135dfe16004f98f12f7 384 SMART SM00316 101 168 1.5E-10 T 14-10-2018 IPR022967 RNA-binding domain, S1 DB29_00111 ec97dffe85c3b135dfe16004f98f12f7 384 SMART SM00316 187 257 5.4E-28 T 14-10-2018 IPR022967 RNA-binding domain, S1 DB29_00111 ec97dffe85c3b135dfe16004f98f12f7 384 SUPERFAMILY SSF50249 6 110 6.45E-25 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DB29_00111 ec97dffe85c3b135dfe16004f98f12f7 384 SUPERFAMILY SSF50249 252 354 1.04E-25 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DB29_00111 ec97dffe85c3b135dfe16004f98f12f7 384 Gene3D G3DSA:2.40.50.140 184 263 7.4E-30 T 14-10-2018 DB29_00111 ec97dffe85c3b135dfe16004f98f12f7 384 Pfam PF00575 S1 RNA binding domain 101 166 3.6E-16 T 14-10-2018 IPR003029 S1 domain GO:0003676 DB29_00111 ec97dffe85c3b135dfe16004f98f12f7 384 Pfam PF00575 S1 RNA binding domain 16 84 5.2E-18 T 14-10-2018 IPR003029 S1 domain GO:0003676 DB29_00111 ec97dffe85c3b135dfe16004f98f12f7 384 Pfam PF00575 S1 RNA binding domain 271 343 8.0E-21 T 14-10-2018 IPR003029 S1 domain GO:0003676 DB29_00111 ec97dffe85c3b135dfe16004f98f12f7 384 Pfam PF00575 S1 RNA binding domain 188 257 2.9E-25 T 14-10-2018 IPR003029 S1 domain GO:0003676 DB29_00111 ec97dffe85c3b135dfe16004f98f12f7 384 PRINTS PR00681 Ribosomal protein S1 signature 36 50 1.1E-58 T 14-10-2018 DB29_00111 ec97dffe85c3b135dfe16004f98f12f7 384 PRINTS PR00681 Ribosomal protein S1 signature 152 172 1.1E-58 T 14-10-2018 DB29_00111 ec97dffe85c3b135dfe16004f98f12f7 384 PRINTS PR00681 Ribosomal protein S1 signature 82 101 1.1E-58 T 14-10-2018 DB29_00111 ec97dffe85c3b135dfe16004f98f12f7 384 PRINTS PR00681 Ribosomal protein S1 signature 18 36 1.1E-58 T 14-10-2018 DB29_00111 ec97dffe85c3b135dfe16004f98f12f7 384 PRINTS PR00681 Ribosomal protein S1 signature 209 230 1.1E-58 T 14-10-2018 DB29_00111 ec97dffe85c3b135dfe16004f98f12f7 384 PRINTS PR00681 Ribosomal protein S1 signature 123 140 1.1E-58 T 14-10-2018 DB29_00111 ec97dffe85c3b135dfe16004f98f12f7 384 PRINTS PR00681 Ribosomal protein S1 signature 287 306 1.1E-58 T 14-10-2018 DB29_00111 ec97dffe85c3b135dfe16004f98f12f7 384 PRINTS PR00681 Ribosomal protein S1 signature 106 122 1.1E-58 T 14-10-2018 DB29_00111 ec97dffe85c3b135dfe16004f98f12f7 384 PRINTS PR00681 Ribosomal protein S1 signature 326 344 1.1E-58 T 14-10-2018 DB29_00111 ec97dffe85c3b135dfe16004f98f12f7 384 Gene3D G3DSA:2.40.50.140 264 348 7.1E-28 T 14-10-2018 DB29_00111 ec97dffe85c3b135dfe16004f98f12f7 384 SUPERFAMILY SSF50249 89 171 2.0E-16 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DB29_00129 e923e6c795138e4015806aa3e9a68d7c 262 Gene3D G3DSA:3.60.21.10 49 227 5.8E-23 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like DB29_00129 e923e6c795138e4015806aa3e9a68d7c 262 SUPERFAMILY SSF56300 47 256 3.01E-33 T 14-10-2018 DB29_00129 e923e6c795138e4015806aa3e9a68d7c 262 Pfam PF00149 Calcineurin-like phosphoesterase 51 202 6.0E-15 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 DB29_03838 4a999ad167cee06625fed904ce637a5c 403 Gene3D G3DSA:3.40.640.10 54 299 2.5E-125 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DB29_03838 4a999ad167cee06625fed904ce637a5c 403 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 217 254 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DB29_03838 4a999ad167cee06625fed904ce637a5c 403 Gene3D G3DSA:3.90.1150.10 19 386 2.5E-125 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DB29_03838 4a999ad167cee06625fed904ce637a5c 403 PIRSF PIRSF000521 16 397 4.5E-50 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DB29_03838 4a999ad167cee06625fed904ce637a5c 403 Pfam PF00202 Aminotransferase class-III 17 394 2.0E-105 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DB29_03838 4a999ad167cee06625fed904ce637a5c 403 SUPERFAMILY SSF53383 10 396 7.86E-109 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DB29_04101 35397e74ac42557ce68db3a220b2466d 449 SUPERFAMILY SSF54368 5 100 4.32E-33 T 14-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 DB29_04101 35397e74ac42557ce68db3a220b2466d 449 Pfam PF00120 Glutamine synthetase, catalytic domain 111 444 1.3E-141 T 14-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 DB29_04101 35397e74ac42557ce68db3a220b2466d 449 ProSitePatterns PS00180 Glutamine synthetase signature 1. 52 70 - T 14-10-2018 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 DB29_04101 35397e74ac42557ce68db3a220b2466d 449 SMART SM01230 110 359 3.8E-141 T 14-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 DB29_04101 35397e74ac42557ce68db3a220b2466d 449 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 8 446 1.2E-179 T 14-10-2018 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 DB29_04101 35397e74ac42557ce68db3a220b2466d 449 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 17 99 4.7E-33 T 14-10-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 DB29_04101 35397e74ac42557ce68db3a220b2466d 449 Gene3D G3DSA:3.30.590.10 113 449 2.3E-145 T 14-10-2018 DB29_04101 35397e74ac42557ce68db3a220b2466d 449 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 239 254 - T 14-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 DB29_04101 35397e74ac42557ce68db3a220b2466d 449 SUPERFAMILY SSF55931 110 446 3.92E-128 T 14-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 DB29_04101 35397e74ac42557ce68db3a220b2466d 449 Gene3D G3DSA:3.10.20.70 2 112 2.8E-41 T 14-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 DB29_02083 f18025fa175384f8ace89d4edd2e02af 428 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 428 210.512 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 DB29_02083 f18025fa175384f8ace89d4edd2e02af 428 Gene3D G3DSA:3.90.170.10 265 428 4.0E-69 T 14-10-2018 DB29_02083 f18025fa175384f8ace89d4edd2e02af 428 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 10 17 - T 14-10-2018 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 DB29_02083 f18025fa175384f8ace89d4edd2e02af 428 Gene3D G3DSA:1.10.300.10 100 199 2.0E-105 T 14-10-2018 DB29_02083 f18025fa175384f8ace89d4edd2e02af 428 Gene3D G3DSA:3.40.440.10 5 252 2.0E-105 T 14-10-2018 DB29_02083 f18025fa175384f8ace89d4edd2e02af 428 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 5 426 1.5E-192 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 DB29_02083 f18025fa175384f8ace89d4edd2e02af 428 SUPERFAMILY SSF52540 1 427 1.06E-174 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_02083 f18025fa175384f8ace89d4edd2e02af 428 SMART SM00788 3 422 3.4E-288 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 DB29_02083 f18025fa175384f8ace89d4edd2e02af 428 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 131 142 - T 14-10-2018 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 DB29_02083 f18025fa175384f8ace89d4edd2e02af 428 Pfam PF00709 Adenylosuccinate synthetase 4 420 1.8E-184 T 14-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 DB29_01401 0d9ea5b4493e371acdfef2d7c982541f 289 SUPERFAMILY SSF53850 89 287 1.45E-27 T 14-10-2018 DB29_01401 0d9ea5b4493e371acdfef2d7c982541f 289 Gene3D G3DSA:3.40.190.290 82 283 3.7E-68 T 14-10-2018 DB29_01401 0d9ea5b4493e371acdfef2d7c982541f 289 SUPERFAMILY SSF46785 1 111 5.45E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_01401 0d9ea5b4493e371acdfef2d7c982541f 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 7.1E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DB29_01401 0d9ea5b4493e371acdfef2d7c982541f 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 7.1E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DB29_01401 0d9ea5b4493e371acdfef2d7c982541f 289 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 7.1E-6 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DB29_01401 0d9ea5b4493e371acdfef2d7c982541f 289 Pfam PF03466 LysR substrate binding domain 88 281 6.8E-30 T 14-10-2018 IPR005119 LysR, substrate-binding DB29_01401 0d9ea5b4493e371acdfef2d7c982541f 289 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 6.5E-14 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DB29_01401 0d9ea5b4493e371acdfef2d7c982541f 289 Gene3D G3DSA:1.10.10.10 1 81 6.2E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_01963 d8002ade0fb6ffbc74bf2bf3b2a678b8 488 SUPERFAMILY SSF101386 230 332 1.74E-23 T 14-10-2018 DB29_01963 d8002ade0fb6ffbc74bf2bf3b2a678b8 488 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 393 451 1.6E-4 T 14-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core DB29_01963 d8002ade0fb6ffbc74bf2bf3b2a678b8 488 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 254 327 4.5E-29 T 14-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core DB29_01963 d8002ade0fb6ffbc74bf2bf3b2a678b8 488 TIGRFAM TIGR00444 mazG: MazG family protein 238 483 8.3E-90 T 14-10-2018 IPR011551 NTP pyrophosphohydrolase MazG DB29_01963 d8002ade0fb6ffbc74bf2bf3b2a678b8 488 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 4 205 1.6E-26 T 14-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 DB29_01963 d8002ade0fb6ffbc74bf2bf3b2a678b8 488 SUPERFAMILY SSF101386 375 463 2.62E-17 T 14-10-2018 DB29_01963 d8002ade0fb6ffbc74bf2bf3b2a678b8 488 SUPERFAMILY SSF53790 2 262 1.57E-34 T 14-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 DB29_01963 d8002ade0fb6ffbc74bf2bf3b2a678b8 488 Gene3D G3DSA:3.40.1010.10 1 118 2.9E-11 T 14-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 DB29_01963 d8002ade0fb6ffbc74bf2bf3b2a678b8 488 Gene3D G3DSA:1.10.287.1080 357 486 2.0E-31 T 14-10-2018 DB29_01963 d8002ade0fb6ffbc74bf2bf3b2a678b8 488 PIRSF PIRSF002845 1 487 8.8E-201 T 14-10-2018 IPR024180 Bifunctional tetrapyrrole methylase/MazG NTP pyrophosphohydrolase, predicted DB29_01963 d8002ade0fb6ffbc74bf2bf3b2a678b8 488 Gene3D G3DSA:1.10.287.1080 229 352 2.4E-42 T 14-10-2018 DB29_04379 392134e8fc61164d33a21d057356382b 268 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 186 203 - T 14-10-2018 IPR000540 Flagellar motor protein MotA, conserved site DB29_04379 392134e8fc61164d33a21d057356382b 268 Pfam PF01618 MotA/TolQ/ExbB proton channel family 102 217 6.7E-25 T 14-10-2018 IPR002898 MotA/TolQ/ExbB proton channel DB29_03136 0c564c390ea802a6a099b47ebb41ba34 177 Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain 9 87 1.9E-11 T 14-10-2018 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 DB29_03136 0c564c390ea802a6a099b47ebb41ba34 177 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 140 146 - T 14-10-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 DB29_03136 0c564c390ea802a6a099b47ebb41ba34 177 SUPERFAMILY SSF53155 11 87 2.75E-8 T 14-10-2018 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily GO:0003908|GO:0006281 Reactome: R-HSA-5657655 DB29_03136 0c564c390ea802a6a099b47ebb41ba34 177 Gene3D G3DSA:1.10.10.10 89 173 4.2E-34 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_03136 0c564c390ea802a6a099b47ebb41ba34 177 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 90 169 4.2E-36 T 14-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 DB29_03136 0c564c390ea802a6a099b47ebb41ba34 177 SUPERFAMILY SSF46767 89 170 5.23E-31 T 14-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 DB29_03136 0c564c390ea802a6a099b47ebb41ba34 177 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 91 170 8.7E-31 T 14-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 DB29_03136 0c564c390ea802a6a099b47ebb41ba34 177 Hamap MF_00772 Methylated-DNA--protein-cysteine methyltransferase [ogt]. 22 170 34.2 T 14-10-2018 IPR023546 Methylated-DNA--protein-cysteine methyltransferase GO:0003824|GO:0006281 DB29_03390 e0a3b825ed57bfe79680d39a11e3f188 156 Gene3D G3DSA:3.30.1360.80 1 156 5.0E-58 T 14-10-2018 IPR037005 S-ribosylhomocysteinase (LuxS) superfamily GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 DB29_03390 e0a3b825ed57bfe79680d39a11e3f188 156 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 78 96 1.4E-36 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 DB29_03390 e0a3b825ed57bfe79680d39a11e3f188 156 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 5 23 1.4E-36 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 DB29_03390 e0a3b825ed57bfe79680d39a11e3f188 156 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 119 138 1.4E-36 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 DB29_03390 e0a3b825ed57bfe79680d39a11e3f188 156 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 28 46 1.4E-36 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 DB29_03390 e0a3b825ed57bfe79680d39a11e3f188 156 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 49 67 1.4E-36 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 DB29_03390 e0a3b825ed57bfe79680d39a11e3f188 156 PIRSF PIRSF006160 1 156 2.5E-61 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 DB29_03390 e0a3b825ed57bfe79680d39a11e3f188 156 Pfam PF02664 S-Ribosylhomocysteinase (LuxS) 4 150 9.3E-49 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 DB29_03390 e0a3b825ed57bfe79680d39a11e3f188 156 Hamap MF_00091 S-ribosylhomocysteine lyase [luxS]. 1 156 30.405 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 DB29_03390 e0a3b825ed57bfe79680d39a11e3f188 156 SUPERFAMILY SSF63411 4 153 2.56E-58 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 DB29_03390 e0a3b825ed57bfe79680d39a11e3f188 156 ProDom PD013172 LYASE SYNTHESIS LUXS AUTOINDUCER-2 PRODUCTION AUTOINDUCER S-RIBOSYLHOMOCYSTEINE AI-2 QUORUM SENSING 8 148 4.0E-80 T 14-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 DB29_00991 0adf0b883b154ac3840cf185a33514c2 276 PIRSF PIRSF006625 1 276 4.2E-139 T 14-10-2018 IPR007045 5-keto 4-deoxyuronate isomerase GO:0008697|GO:0045490 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 DB29_00991 0adf0b883b154ac3840cf185a33514c2 276 Pfam PF04962 KduI/IolB family 33 267 4.0E-44 T 14-10-2018 IPR021120 KduI/IolB isomerase GO:0016861 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 DB29_00991 0adf0b883b154ac3840cf185a33514c2 276 SUPERFAMILY SSF51182 1 260 3.62E-109 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily DB29_00991 0adf0b883b154ac3840cf185a33514c2 276 Gene3D G3DSA:2.60.120.10 10 261 2.0E-120 T 14-10-2018 IPR014710 RmlC-like jelly roll fold DB29_00991 0adf0b883b154ac3840cf185a33514c2 276 Hamap MF_00687 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase [kduI]. 1 276 57.558 T 14-10-2018 IPR007045 5-keto 4-deoxyuronate isomerase GO:0008697|GO:0045490 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 DB29_00991 0adf0b883b154ac3840cf185a33514c2 276 Gene3D G3DSA:2.60.120.520 30 142 2.0E-120 T 14-10-2018 IPR027449 5-keto-4-deoxyuronate isomerase, N-terminal KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 DB29_03743 fc72b5230ee6a98d29fc258c84aaee1c 267 Gene3D G3DSA:3.40.50.10330 16 265 1.0E-89 T 14-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 DB29_03743 fc72b5230ee6a98d29fc258c84aaee1c 267 Gene3D G3DSA:2.60.200.30 102 243 1.0E-89 T 14-10-2018 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal GO:0003951|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 DB29_03743 fc72b5230ee6a98d29fc258c84aaee1c 267 SUPERFAMILY SSF111331 25 264 3.79E-61 T 14-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily DB29_03743 fc72b5230ee6a98d29fc258c84aaee1c 267 Hamap MF_00361 NAD kinase [nadK]. 1 266 23.414 T 14-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 DB29_03743 fc72b5230ee6a98d29fc258c84aaee1c 267 Pfam PF01513 ATP-NAD kinase 30 249 7.2E-27 T 14-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 DB29_00115 cd7cf968c2d3dab0c0d671d90a29705e 296 Gene3D G3DSA:1.10.10.2520 181 260 3.0E-30 T 14-10-2018 DB29_00115 cd7cf968c2d3dab0c0d671d90a29705e 296 Gene3D G3DSA:1.10.101.10 27 106 1.7E-20 T 14-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 DB29_00115 cd7cf968c2d3dab0c0d671d90a29705e 296 Pfam PF07486 Cell Wall Hydrolase 197 295 7.2E-28 T 14-10-2018 IPR011105 Cell wall hydrolase, SleB GO:0016787 DB29_00115 cd7cf968c2d3dab0c0d671d90a29705e 296 Pfam PF01471 Putative peptidoglycan binding domain 41 97 3.9E-14 T 14-10-2018 IPR002477 Peptidoglycan binding-like DB29_00115 cd7cf968c2d3dab0c0d671d90a29705e 296 TIGRFAM TIGR02869 spore_SleB: spore cortex-lytic enzyme 30 295 6.4E-92 T 14-10-2018 IPR014224 Spore cortex-lytic enzyme SleB GO:0003824|GO:0009847 DB29_00115 cd7cf968c2d3dab0c0d671d90a29705e 296 Gene3D G3DSA:2.40.10.420 261 295 4.0E-22 T 14-10-2018 DB29_00115 cd7cf968c2d3dab0c0d671d90a29705e 296 SUPERFAMILY SSF47090 33 99 9.42E-19 T 14-10-2018 IPR036365 PGBD-like superfamily DB29_04108 a87c592f420c3a1d94cd7a34481e0a68 254 Gene3D G3DSA:3.90.850.10 32 252 1.8E-70 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 DB29_04108 a87c592f420c3a1d94cd7a34481e0a68 254 SUPERFAMILY SSF56529 47 251 6.54E-68 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 DB29_04108 a87c592f420c3a1d94cd7a34481e0a68 254 Pfam PF10370 Domain of unknown function (DUF2437) 1 50 3.3E-15 T 14-10-2018 IPR018833 Domain of unknown function DUF2437 DB29_04108 a87c592f420c3a1d94cd7a34481e0a68 254 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 56 249 1.9E-57 T 14-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 DB29_02818 a4d4f92838238d7402e0c0e7b97c39c2 562 Gene3D G3DSA:1.10.1370.30 3 562 3.3E-153 T 14-10-2018 DB29_02818 a4d4f92838238d7402e0c0e7b97c39c2 562 Pfam PF01432 Peptidase family M3 167 546 9.5E-39 T 14-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 DB29_02818 a4d4f92838238d7402e0c0e7b97c39c2 562 SUPERFAMILY SSF55486 57 546 2.32E-75 T 14-10-2018 DB29_02818 a4d4f92838238d7402e0c0e7b97c39c2 562 TIGRFAM TIGR02289 M3_not_pepF: oligoendopeptidase, M3 family 16 561 1.7E-176 T 14-10-2018 IPR011976 Peptidase M3B, oligoendopeptidase-related DB29_02246 77603b48c264a540bf70cf852428d89e 505 SUPERFAMILY SSF50022 403 502 3.93E-26 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 DB29_02246 77603b48c264a540bf70cf852428d89e 505 Pfam PF00355 Rieske [2Fe-2S] domain 422 501 1.3E-14 T 14-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 DB29_02246 77603b48c264a540bf70cf852428d89e 505 Gene3D G3DSA:3.30.9.10 123 336 7.5E-43 T 14-10-2018 DB29_02246 77603b48c264a540bf70cf852428d89e 505 PRINTS PR00162 Rieske 2Fe-2S subunit signature 477 489 1.8E-7 T 14-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 DB29_02246 77603b48c264a540bf70cf852428d89e 505 PRINTS PR00162 Rieske 2Fe-2S subunit signature 456 467 1.8E-7 T 14-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 DB29_02246 77603b48c264a540bf70cf852428d89e 505 PRINTS PR00162 Rieske 2Fe-2S subunit signature 489 501 1.8E-7 T 14-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 DB29_02246 77603b48c264a540bf70cf852428d89e 505 Gene3D G3DSA:2.102.10.10 402 504 1.0E-25 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 DB29_02246 77603b48c264a540bf70cf852428d89e 505 Pfam PF01266 FAD dependent oxidoreductase 30 377 7.9E-37 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 DB29_02246 77603b48c264a540bf70cf852428d89e 505 SUPERFAMILY SSF51905 29 386 4.32E-32 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB29_02246 77603b48c264a540bf70cf852428d89e 505 Gene3D G3DSA:3.50.50.60 30 378 7.5E-43 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB29_01348 29616aec6d53a8dc36a875cc6759ea4a 306 SUPERFAMILY SSF51556 1 301 1.91E-86 T 14-10-2018 IPR032466 Metal-dependent hydrolase DB29_01348 29616aec6d53a8dc36a875cc6759ea4a 306 PIRSF PIRSF016839 1 303 2.4E-82 T 14-10-2018 IPR001559 Phosphotriesterase GO:0008270|GO:0009056 DB29_01348 29616aec6d53a8dc36a875cc6759ea4a 306 Gene3D G3DSA:3.20.20.140 1 305 4.6E-99 T 14-10-2018 DB29_01348 29616aec6d53a8dc36a875cc6759ea4a 306 Pfam PF02126 Phosphotriesterase family 9 299 1.9E-72 T 14-10-2018 IPR001559 Phosphotriesterase GO:0008270|GO:0009056 DB29_00454 f36f3755e643370f7096dec0fd51b1f4 433 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 1 421 32.153 T 14-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 DB29_00454 f36f3755e643370f7096dec0fd51b1f4 433 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 194 400 1.3E-54 T 14-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial DB29_00454 f36f3755e643370f7096dec0fd51b1f4 433 Pfam PF02355 Protein export membrane protein 241 408 3.8E-13 T 14-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial DB29_00454 f36f3755e643370f7096dec0fd51b1f4 433 SUPERFAMILY SSF82866 143 412 2.88E-38 T 14-10-2018 DB29_00454 f36f3755e643370f7096dec0fd51b1f4 433 Gene3D G3DSA:3.30.70.3400 34 122 1.2E-21 T 14-10-2018 DB29_00454 f36f3755e643370f7096dec0fd51b1f4 433 Gene3D G3DSA:1.20.1640.10 226 419 1.6E-9 T 14-10-2018 DB29_00454 f36f3755e643370f7096dec0fd51b1f4 433 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 34 407 4.4E-105 T 14-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 DB29_00829 2b18bc630597c4aba6b2f896a9765292 260 Gene3D G3DSA:3.40.50.720 5 259 1.6E-70 T 14-10-2018 DB29_00829 2b18bc630597c4aba6b2f896a9765292 260 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 DB29_00829 2b18bc630597c4aba6b2f896a9765292 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 6.8E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_00829 2b18bc630597c4aba6b2f896a9765292 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 6.8E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_00829 2b18bc630597c4aba6b2f896a9765292 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 6.8E-10 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_00829 2b18bc630597c4aba6b2f896a9765292 260 Pfam PF00106 short chain dehydrogenase 6 197 8.5E-54 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_00829 2b18bc630597c4aba6b2f896a9765292 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 221 241 1.2E-30 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_00829 2b18bc630597c4aba6b2f896a9765292 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 1.2E-30 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_00829 2b18bc630597c4aba6b2f896a9765292 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 1.2E-30 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_00829 2b18bc630597c4aba6b2f896a9765292 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 1.2E-30 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_00829 2b18bc630597c4aba6b2f896a9765292 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 1.2E-30 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_00829 2b18bc630597c4aba6b2f896a9765292 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 1.2E-30 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_00829 2b18bc630597c4aba6b2f896a9765292 260 SUPERFAMILY SSF51735 5 259 3.08E-71 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_00261 a5db869c0fafa89566d5d728ac8cda12 152 Gene3D G3DSA:3.40.630.30 3 146 7.3E-41 T 14-10-2018 DB29_00261 a5db869c0fafa89566d5d728ac8cda12 152 Pfam PF13673 Acetyltransferase (GNAT) domain 23 142 1.4E-22 T 14-10-2018 IPR000182 GNAT domain DB29_00261 a5db869c0fafa89566d5d728ac8cda12 152 SUPERFAMILY SSF55729 3 144 1.05E-36 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase DB29_02142 dfa948249442e1b0199d6ad97c0c38e7 241 Gene3D G3DSA:1.10.10.10 4 76 3.4E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_02142 dfa948249442e1b0199d6ad97c0c38e7 241 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 35 49 2.3E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DB29_02142 dfa948249442e1b0199d6ad97c0c38e7 241 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 49 65 2.3E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DB29_02142 dfa948249442e1b0199d6ad97c0c38e7 241 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 74 4.6E-19 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DB29_02142 dfa948249442e1b0199d6ad97c0c38e7 241 SUPERFAMILY SSF46785 6 79 1.18E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_02142 dfa948249442e1b0199d6ad97c0c38e7 241 Pfam PF07729 FCD domain 100 225 6.5E-26 T 14-10-2018 IPR011711 GntR, C-terminal DB29_02142 dfa948249442e1b0199d6ad97c0c38e7 241 SUPERFAMILY SSF48008 98 231 4.71E-26 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DB29_02142 dfa948249442e1b0199d6ad97c0c38e7 241 SMART SM00895 100 226 7.6E-22 T 14-10-2018 IPR011711 GntR, C-terminal DB29_02142 dfa948249442e1b0199d6ad97c0c38e7 241 Gene3D G3DSA:1.20.120.530 81 235 3.5E-29 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DB29_02142 dfa948249442e1b0199d6ad97c0c38e7 241 SMART SM00345 16 75 1.0E-16 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DB29_00863 484adc85a669e61464e6ffac84d05b67 332 SUPERFAMILY SSF46785 10 75 7.99E-13 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_00863 484adc85a669e61464e6ffac84d05b67 332 SUPERFAMILY SSF53067 97 246 5.46E-13 T 14-10-2018 DB29_00863 484adc85a669e61464e6ffac84d05b67 332 Pfam PF00480 ROK family 114 240 7.0E-9 T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 DB29_00863 484adc85a669e61464e6ffac84d05b67 332 Gene3D G3DSA:3.30.420.40 197 273 7.0E-15 T 14-10-2018 DB29_00863 484adc85a669e61464e6ffac84d05b67 332 Gene3D G3DSA:3.30.420.40 100 196 7.0E-15 T 14-10-2018 DB29_00863 484adc85a669e61464e6ffac84d05b67 332 Gene3D G3DSA:1.10.10.10 3 76 5.3E-14 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_01465 6a9da3824019130ab8f3ce11035463c0 529 Gene3D G3DSA:3.40.190.10 207 512 7.5E-129 T 14-10-2018 DB29_01465 6a9da3824019130ab8f3ce11035463c0 529 PIRSF PIRSF002741 1 522 8.8E-114 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 DB29_01465 6a9da3824019130ab8f3ce11035463c0 529 Gene3D G3DSA:3.90.76.10 56 206 7.5E-129 T 14-10-2018 DB29_01465 6a9da3824019130ab8f3ce11035463c0 529 SUPERFAMILY SSF53850 40 518 1.23E-131 T 14-10-2018 DB29_01465 6a9da3824019130ab8f3ce11035463c0 529 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 87 442 9.5E-84 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain DB29_01465 6a9da3824019130ab8f3ce11035463c0 529 Gene3D G3DSA:3.10.105.10 286 500 7.5E-129 T 14-10-2018 DB29_00219 5c3cc717d7faf3b0fc2de3499d32618c 172 Gene3D G3DSA:3.40.30.10 24 172 6.3E-38 T 14-10-2018 DB29_00219 5c3cc717d7faf3b0fc2de3499d32618c 172 Pfam PF00578 AhpC/TSA family 35 152 4.9E-24 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 DB29_00219 5c3cc717d7faf3b0fc2de3499d32618c 172 SUPERFAMILY SSF52833 5 172 1.68E-35 T 14-10-2018 IPR036249 Thioredoxin-like superfamily DB29_01761 9d9519b56ff2ea4535b515aa6792be61 282 SUPERFAMILY SSF46689 3 75 1.97E-17 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DB29_01761 9d9519b56ff2ea4535b515aa6792be61 282 Gene3D G3DSA:1.10.10.10 1 80 5.1E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_01761 9d9519b56ff2ea4535b515aa6792be61 282 Pfam PF01418 Helix-turn-helix domain, rpiR family 4 76 3.7E-18 T 14-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 DB29_01761 9d9519b56ff2ea4535b515aa6792be61 282 Gene3D G3DSA:3.40.50.10490 96 274 4.9E-44 T 14-10-2018 DB29_01761 9d9519b56ff2ea4535b515aa6792be61 282 Pfam PF01380 SIS domain 129 255 6.5E-24 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 DB29_01761 9d9519b56ff2ea4535b515aa6792be61 282 SUPERFAMILY SSF53697 95 266 4.19E-42 T 14-10-2018 DB29_03600 6de0d47089257a8bb58c6e8a88999dd6 250 SUPERFAMILY SSF54211 1 140 4.25E-44 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DB29_03600 6de0d47089257a8bb58c6e8a88999dd6 250 ProSitePatterns PS01277 Ribonuclease PH signature. 116 128 - T 14-10-2018 IPR018336 Ribonuclease PH, conserved site DB29_03600 6de0d47089257a8bb58c6e8a88999dd6 250 Pfam PF03725 3' exoribonuclease family, domain 2 159 224 3.2E-8 T 14-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 DB29_03600 6de0d47089257a8bb58c6e8a88999dd6 250 Hamap MF_00564 Ribonuclease PH [rph]. 11 238 43.089 T 14-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 DB29_03600 6de0d47089257a8bb58c6e8a88999dd6 250 Pfam PF01138 3' exoribonuclease family, domain 1 10 140 2.3E-23 T 14-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 DB29_03600 6de0d47089257a8bb58c6e8a88999dd6 250 Gene3D G3DSA:3.30.230.70 14 244 6.4E-58 T 14-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 DB29_03600 6de0d47089257a8bb58c6e8a88999dd6 250 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 2 235 2.1E-113 T 14-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 DB29_03600 6de0d47089257a8bb58c6e8a88999dd6 250 SUPERFAMILY SSF55666 153 236 1.44E-20 T 14-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 DB29_03535 864d95a3cca63aaab83e17ac4d485678 371 PIRSF PIRSF001369 1 371 5.1E-158 T 14-10-2018 IPR024176 Citrate synthase, bacterial-type DB29_03535 864d95a3cca63aaab83e17ac4d485678 371 PRINTS PR00143 Citrate synthase signature 172 187 3.2E-46 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 DB29_03535 864d95a3cca63aaab83e17ac4d485678 371 PRINTS PR00143 Citrate synthase signature 324 338 3.2E-46 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 DB29_03535 864d95a3cca63aaab83e17ac4d485678 371 PRINTS PR00143 Citrate synthase signature 304 320 3.2E-46 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 DB29_03535 864d95a3cca63aaab83e17ac4d485678 371 PRINTS PR00143 Citrate synthase signature 123 136 3.2E-46 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 DB29_03535 864d95a3cca63aaab83e17ac4d485678 371 PRINTS PR00143 Citrate synthase signature 194 222 3.2E-46 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 DB29_03535 864d95a3cca63aaab83e17ac4d485678 371 PRINTS PR00143 Citrate synthase signature 247 267 3.2E-46 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 DB29_03535 864d95a3cca63aaab83e17ac4d485678 371 Gene3D G3DSA:1.10.230.10 220 318 9.4E-130 T 14-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain DB29_03535 864d95a3cca63aaab83e17ac4d485678 371 TIGRFAM TIGR01800 cit_synth_II: 2-methylcitrate synthase/citrate synthase II 5 371 3.1E-164 T 14-10-2018 IPR011278 2-methylcitrate synthase/citrate synthase type I GO:0005737|GO:0046912 DB29_03535 864d95a3cca63aaab83e17ac4d485678 371 Gene3D G3DSA:1.10.580.10 25 351 9.4E-130 T 14-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 DB29_03535 864d95a3cca63aaab83e17ac4d485678 371 Pfam PF00285 Citrate synthase, C-terminal domain 6 354 2.0E-132 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 DB29_03535 864d95a3cca63aaab83e17ac4d485678 371 SUPERFAMILY SSF48256 2 371 7.98E-137 T 14-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 DB29_03535 864d95a3cca63aaab83e17ac4d485678 371 ProSitePatterns PS00480 Citrate synthase signature. 254 266 - T 14-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 DB29_01994 c63f53f7de2962e3f856a74bc19882f1 154 SMART SM00418 12 107 0.0072 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DB29_01994 c63f53f7de2962e3f856a74bc19882f1 154 Pfam PF01022 Bacterial regulatory protein, arsR family 19 64 3.0E-11 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DB29_01994 c63f53f7de2962e3f856a74bc19882f1 154 Gene3D G3DSA:1.10.10.10 2 84 6.1E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_01994 c63f53f7de2962e3f856a74bc19882f1 154 SUPERFAMILY SSF46785 7 149 1.42E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_02863 47b72f34e990274d632ba1639344cb29 122 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 74 1.2E-11 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DB29_02863 47b72f34e990274d632ba1639344cb29 122 SMART SM00345 15 74 2.9E-10 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DB29_02863 47b72f34e990274d632ba1639344cb29 122 SUPERFAMILY SSF46785 6 87 1.93E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_02863 47b72f34e990274d632ba1639344cb29 122 Gene3D G3DSA:1.10.10.10 8 122 8.1E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_00430 d47567b80d488b7afafb2465bfd9c5ea 761 Gene3D G3DSA:3.40.50.300 511 738 7.4E-138 T 14-10-2018 DB29_00430 d47567b80d488b7afafb2465bfd9c5ea 761 SUPERFAMILY SSF52540 463 747 3.81E-56 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_00430 d47567b80d488b7afafb2465bfd9c5ea 761 Gene3D G3DSA:2.30.30.940 597 676 7.4E-138 T 14-10-2018 DB29_00430 d47567b80d488b7afafb2465bfd9c5ea 761 Hamap MF_01488 ATP-dependent RecD-like DNA helicase [recD2]. 11 751 28.492 T 14-10-2018 IPR006345 DNA helicase, RecD-like GO:0003677|GO:0032508|GO:0043141 DB29_00430 d47567b80d488b7afafb2465bfd9c5ea 761 Gene3D G3DSA:3.40.50.300 322 744 7.4E-138 T 14-10-2018 DB29_00430 d47567b80d488b7afafb2465bfd9c5ea 761 Pfam PF13604 AAA domain 340 543 3.0E-49 T 14-10-2018 DB29_00430 d47567b80d488b7afafb2465bfd9c5ea 761 Pfam PF14490 Helix-hairpin-helix containing domain 155 246 2.9E-27 T 14-10-2018 IPR029493 RecD helicase-like helix-hairpin-helix domain DB29_00430 d47567b80d488b7afafb2465bfd9c5ea 761 Gene3D G3DSA:1.10.10.2220 197 309 2.3E-15 T 14-10-2018 DB29_00430 d47567b80d488b7afafb2465bfd9c5ea 761 SUPERFAMILY SSF52540 195 511 8.08E-43 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_00430 d47567b80d488b7afafb2465bfd9c5ea 761 Pfam PF13538 UvrD-like helicase C-terminal domain 675 723 1.1E-17 T 14-10-2018 IPR027785 UvrD-like helicase C-terminal domain DB29_00430 d47567b80d488b7afafb2465bfd9c5ea 761 TIGRFAM TIGR01448 recD_rel: helicase, RecD/TraA family 14 748 3.5E-247 T 14-10-2018 IPR006345 DNA helicase, RecD-like GO:0003677|GO:0032508|GO:0043141 DB29_00762 75457299dc5c0a3ccaf3f112dc4783e8 461 SUPERFAMILY SSF55103 218 454 5.89E-62 T 14-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 DB29_00762 75457299dc5c0a3ccaf3f112dc4783e8 461 Pfam PF01565 FAD binding domain 39 176 1.3E-39 T 14-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 DB29_00762 75457299dc5c0a3ccaf3f112dc4783e8 461 Pfam PF02913 FAD linked oxidases, C-terminal domain 212 452 1.2E-54 T 14-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 DB29_00762 75457299dc5c0a3ccaf3f112dc4783e8 461 Gene3D G3DSA:3.30.465.40 2 233 8.3E-69 T 14-10-2018 DB29_00762 75457299dc5c0a3ccaf3f112dc4783e8 461 SUPERFAMILY SSF56176 2 213 5.14E-65 T 14-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 DB29_00762 75457299dc5c0a3ccaf3f112dc4783e8 461 Gene3D G3DSA:3.30.70.2740 332 413 3.0E-11 T 14-10-2018 DB29_00762 75457299dc5c0a3ccaf3f112dc4783e8 461 Gene3D G3DSA:1.10.45.10 414 453 1.8E-5 T 14-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 DB29_03098 7cd2abfd61f8c003b41a767e779c7c61 375 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 69 364 1.9E-69 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme DB29_03098 7cd2abfd61f8c003b41a767e779c7c61 375 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 93 106 - T 14-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 DB29_03098 7cd2abfd61f8c003b41a767e779c7c61 375 Gene3D G3DSA:3.40.50.1100 52 369 2.1E-97 T 14-10-2018 DB29_03098 7cd2abfd61f8c003b41a767e779c7c61 375 Gene3D G3DSA:3.40.50.1100 101 199 2.1E-97 T 14-10-2018 DB29_03098 7cd2abfd61f8c003b41a767e779c7c61 375 SUPERFAMILY SSF53686 4 373 1.44E-91 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme DB29_02301 d0bf4669da70e71b5423eb9025219ab7 292 PIRSF PIRSF036979 1 292 1.5E-98 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 DB29_02301 d0bf4669da70e71b5423eb9025219ab7 292 Gene3D G3DSA:3.40.800.10 16 291 2.1E-94 T 14-10-2018 DB29_02301 d0bf4669da70e71b5423eb9025219ab7 292 Pfam PF00491 Arginase family 22 285 1.1E-78 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 DB29_02301 d0bf4669da70e71b5423eb9025219ab7 292 TIGRFAM TIGR01230 agmatinase: agmatinase 10 286 2.0E-110 T 14-10-2018 IPR005925 Agmatinase-related KEGG: 00330+3.5.3.11|MetaCyc: PWY-40|MetaCyc: PWY-6305|Reactome: R-HSA-351143 DB29_02301 d0bf4669da70e71b5423eb9025219ab7 292 SUPERFAMILY SSF52768 17 291 2.7E-86 T 14-10-2018 IPR023696 Ureohydrolase domain superfamily DB29_02301 d0bf4669da70e71b5423eb9025219ab7 292 ProSitePatterns PS01053 Arginase family signature. 214 235 - T 14-10-2018 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 DB29_03024 8353712796ccba52308203abc0fa828d 320 Gene3D G3DSA:2.60.120.10 232 320 2.5E-24 T 14-10-2018 IPR014710 RmlC-like jelly roll fold DB29_03024 8353712796ccba52308203abc0fa828d 320 Gene3D G3DSA:2.60.120.10 3 229 9.3E-87 T 14-10-2018 IPR014710 RmlC-like jelly roll fold DB29_03024 8353712796ccba52308203abc0fa828d 320 Pfam PF01238 Phosphomannose isomerase type I 10 319 2.2E-37 T 14-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 DB29_03024 8353712796ccba52308203abc0fa828d 320 PIRSF PIRSF036894 6 320 4.5E-120 T 14-10-2018 IPR014628 Mannose-6-phosphate isomerase, Firmicutes type, short form GO:0004476|GO:0005975 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882 DB29_03024 8353712796ccba52308203abc0fa828d 320 TIGRFAM TIGR00218 manA: mannose-6-phosphate isomerase, class I 104 319 3.8E-41 T 14-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 DB29_03024 8353712796ccba52308203abc0fa828d 320 SUPERFAMILY SSF51182 7 318 1.62E-93 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily DB29_03319 42d6759925335463c94e21b1bca72918 121 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 45 94 3.6E-8 T 14-10-2018 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 DB29_03319 42d6759925335463c94e21b1bca72918 121 SUPERFAMILY SSF69118 8 116 4.97E-27 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 DB29_03319 42d6759925335463c94e21b1bca72918 121 Gene3D G3DSA:1.20.1290.10 2 121 1.6E-28 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 DB29_03319 42d6759925335463c94e21b1bca72918 121 Pfam PF02627 Carboxymuconolactone decarboxylase family 28 109 2.8E-17 T 14-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 DB29_00537 acdab4c602a057ae024a0712d0cd5388 247 Gene3D G3DSA:3.40.50.1360 1 241 9.7E-103 T 14-10-2018 DB29_00537 acdab4c602a057ae024a0712d0cd5388 247 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 11 228 1.6E-24 T 14-10-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 DB29_00537 acdab4c602a057ae024a0712d0cd5388 247 TIGRFAM TIGR00502 nagB: glucosamine-6-phosphate deaminase 1 241 3.9E-94 T 14-10-2018 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 DB29_00537 acdab4c602a057ae024a0712d0cd5388 247 ProSitePatterns PS01161 Glucosamine/galactosamine-6-phosphate isomerases signature. 120 138 - T 14-10-2018 IPR018321 Glucosamine-6-phosphate isomerase, conserved site GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 DB29_00537 acdab4c602a057ae024a0712d0cd5388 247 Hamap MF_01241 Glucosamine-6-phosphate deaminase [nagB]. 1 241 42.867 T 14-10-2018 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 DB29_00537 acdab4c602a057ae024a0712d0cd5388 247 SUPERFAMILY SSF100950 1 241 1.78E-95 T 14-10-2018 IPR037171 NagB/RpiA transferase-like DB29_01549 fe3b7020c4dce1a9a506b882e7d3785f 451 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 339 447 1.7E-24 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DB29_01549 fe3b7020c4dce1a9a506b882e7d3785f 451 SUPERFAMILY SSF55874 294 448 1.96E-38 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB29_01549 fe3b7020c4dce1a9a506b882e7d3785f 451 Gene3D G3DSA:3.30.565.10 300 450 1.7E-38 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB29_01549 fe3b7020c4dce1a9a506b882e7d3785f 451 PRINTS PR00344 Bacterial sensor protein C-terminal signature 374 388 4.3E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB29_01549 fe3b7020c4dce1a9a506b882e7d3785f 451 PRINTS PR00344 Bacterial sensor protein C-terminal signature 409 427 4.3E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB29_01549 fe3b7020c4dce1a9a506b882e7d3785f 451 PRINTS PR00344 Bacterial sensor protein C-terminal signature 433 446 4.3E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB29_01549 fe3b7020c4dce1a9a506b882e7d3785f 451 PRINTS PR00344 Bacterial sensor protein C-terminal signature 392 402 4.3E-16 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB29_01549 fe3b7020c4dce1a9a506b882e7d3785f 451 SUPERFAMILY SSF158472 176 225 1.83E-5 T 14-10-2018 DB29_01549 fe3b7020c4dce1a9a506b882e7d3785f 451 SMART SM00304 175 229 5.8E-5 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DB29_01549 fe3b7020c4dce1a9a506b882e7d3785f 451 SMART SM00388 230 297 6.1E-15 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DB29_01549 fe3b7020c4dce1a9a506b882e7d3785f 451 Gene3D G3DSA:1.10.287.130 179 297 1.0E-25 T 14-10-2018 DB29_01549 fe3b7020c4dce1a9a506b882e7d3785f 451 SMART SM00387 339 449 3.5E-35 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DB29_01549 fe3b7020c4dce1a9a506b882e7d3785f 451 Pfam PF00512 His Kinase A (phospho-acceptor) domain 231 296 1.8E-14 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DB29_01549 fe3b7020c4dce1a9a506b882e7d3785f 451 SUPERFAMILY SSF47384 213 295 1.08E-15 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DB29_00434 95c05ebd2541996679212b6ea91832b6 139 SUPERFAMILY SSF46785 2 125 1.09E-32 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_00434 95c05ebd2541996679212b6ea91832b6 139 Pfam PF02082 Transcriptional regulator 2 82 2.5E-27 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type DB29_00434 95c05ebd2541996679212b6ea91832b6 139 Gene3D G3DSA:1.10.10.10 1 139 3.3E-51 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_00434 95c05ebd2541996679212b6ea91832b6 139 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 2 124 4.0E-34 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type DB29_03548 963482a93528e4c2bd33ec91d582f417 117 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 2 113 1.9E-47 T 14-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 DB29_03548 963482a93528e4c2bd33ec91d582f417 117 Pfam PF03477 ATP cone domain 16 102 5.5E-18 T 14-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 DB29_03548 963482a93528e4c2bd33ec91d582f417 117 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 117 62.483 T 14-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 DB29_00735 1e89a9b11579c3ebce39d60dab9136ec 262 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 100 253 3.1E-13 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DB29_00735 1e89a9b11579c3ebce39d60dab9136ec 262 TIGRFAM TIGR01097 PhnE: phosphonate ABC transporter, permease protein PhnE 14 262 1.7E-88 T 14-10-2018 IPR005769 ABC transporter, permease PhnE/PtxC GO:0005887|GO:0015604|GO:0015716 DB29_00735 1e89a9b11579c3ebce39d60dab9136ec 262 Gene3D G3DSA:1.10.3720.10 62 261 1.4E-28 T 14-10-2018 IPR035906 MetI-like superfamily DB29_00735 1e89a9b11579c3ebce39d60dab9136ec 262 SUPERFAMILY SSF161098 69 253 1.44E-33 T 14-10-2018 IPR035906 MetI-like superfamily DB29_01148 c39d9e8d92331bf4785735cc971ad65b 284 Gene3D G3DSA:3.30.460.10 9 149 2.4E-58 T 14-10-2018 DB29_01148 c39d9e8d92331bf4785735cc971ad65b 284 SUPERFAMILY SSF81631 139 280 2.12E-55 T 14-10-2018 DB29_01148 c39d9e8d92331bf4785735cc971ad65b 284 PIRSF PIRSF000812 1 283 1.2E-121 T 14-10-2018 IPR007530 Aminoglycoside 6-adenylyltransferase DB29_01148 c39d9e8d92331bf4785735cc971ad65b 284 Pfam PF04439 Streptomycin adenylyltransferase 2 277 2.2E-117 T 14-10-2018 IPR007530 Aminoglycoside 6-adenylyltransferase DB29_01148 c39d9e8d92331bf4785735cc971ad65b 284 SUPERFAMILY SSF81301 1 132 4.25E-48 T 14-10-2018 DB29_01148 c39d9e8d92331bf4785735cc971ad65b 284 Gene3D G3DSA:1.20.120.330 150 284 8.9E-51 T 14-10-2018 DB29_03456 2d30311209fcc5f4385bb7cb647010bb 186 Pfam PF13563 2'-5' RNA ligase superfamily 25 136 1.6E-11 T 14-10-2018 DB29_03456 2d30311209fcc5f4385bb7cb647010bb 186 Gene3D G3DSA:3.90.1140.10 4 186 8.0E-38 T 14-10-2018 DB29_03456 2d30311209fcc5f4385bb7cb647010bb 186 Hamap MF_01940 RNA 2',3'-cyclic phosphodiesterase [thpR]. 4 180 18.75 T 14-10-2018 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 DB29_03456 2d30311209fcc5f4385bb7cb647010bb 186 TIGRFAM TIGR02258 2_5_ligase: 2'-5' RNA ligase 5 179 8.4E-35 T 14-10-2018 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 DB29_03456 2d30311209fcc5f4385bb7cb647010bb 186 SUPERFAMILY SSF55144 5 182 3.66E-40 T 14-10-2018 IPR009097 Cyclic phosphodiesterase DB29_02253 e223dda2da72710939d13bc1cfb08b0e 452 Gene3D G3DSA:3.30.590.10 115 452 5.4E-128 T 14-10-2018 DB29_02253 e223dda2da72710939d13bc1cfb08b0e 452 SUPERFAMILY SSF55931 112 448 9.81E-119 T 14-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 DB29_02253 e223dda2da72710939d13bc1cfb08b0e 452 SMART SM01230 112 362 5.2E-126 T 14-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 DB29_02253 e223dda2da72710939d13bc1cfb08b0e 452 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 240 255 - T 14-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 DB29_02253 e223dda2da72710939d13bc1cfb08b0e 452 Pfam PF00120 Glutamine synthetase, catalytic domain 113 448 8.3E-132 T 14-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 DB29_02253 e223dda2da72710939d13bc1cfb08b0e 452 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 14 448 2.8E-159 T 14-10-2018 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 DB29_02253 e223dda2da72710939d13bc1cfb08b0e 452 ProSitePatterns PS00180 Glutamine synthetase signature 1. 58 76 - T 14-10-2018 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 DB29_02253 e223dda2da72710939d13bc1cfb08b0e 452 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 23 106 5.3E-26 T 14-10-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 DB29_02253 e223dda2da72710939d13bc1cfb08b0e 452 SUPERFAMILY SSF54368 12 111 7.46E-26 T 14-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 DB29_02253 e223dda2da72710939d13bc1cfb08b0e 452 Gene3D G3DSA:3.10.20.70 10 114 1.4E-34 T 14-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 DB29_01936 bcff3ed90b266d3bdd747ccbd15e992a 333 Pfam PF01207 Dihydrouridine synthase (Dus) 14 316 6.1E-106 T 14-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 DB29_01936 bcff3ed90b266d3bdd747ccbd15e992a 333 PIRSF PIRSF006621 1 329 1.1E-104 T 14-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 DB29_01936 bcff3ed90b266d3bdd747ccbd15e992a 333 Gene3D G3DSA:3.20.20.70 7 249 7.9E-82 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DB29_01936 bcff3ed90b266d3bdd747ccbd15e992a 333 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 96 114 - T 14-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 DB29_01936 bcff3ed90b266d3bdd747ccbd15e992a 333 SUPERFAMILY SSF51395 11 320 3.3E-90 T 14-10-2018 DB29_01936 bcff3ed90b266d3bdd747ccbd15e992a 333 Gene3D G3DSA:1.10.1200.80 254 329 6.2E-21 T 14-10-2018 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 DB29_01936 bcff3ed90b266d3bdd747ccbd15e992a 333 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 4 319 4.5E-130 T 14-10-2018 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 DB29_01231 8ae6e42374aba73f8d2e1d27eb919c3e 217 Gene3D G3DSA:1.10.3720.10 7 216 2.5E-51 T 14-10-2018 IPR035906 MetI-like superfamily DB29_01231 8ae6e42374aba73f8d2e1d27eb919c3e 217 SUPERFAMILY SSF161098 15 202 3.92E-41 T 14-10-2018 IPR035906 MetI-like superfamily DB29_01231 8ae6e42374aba73f8d2e1d27eb919c3e 217 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 14 110 7.4E-25 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 DB29_01231 8ae6e42374aba73f8d2e1d27eb919c3e 217 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 35 211 3.4E-19 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DB29_01950 48e32ec2b9cecadb000e3884d6afe04e 245 Pfam PF13519 von Willebrand factor type A domain 134 228 1.4E-8 T 14-10-2018 IPR002035 von Willebrand factor, type A DB29_01950 48e32ec2b9cecadb000e3884d6afe04e 245 SUPERFAMILY SSF53300 3 66 2.08E-8 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily DB29_01950 48e32ec2b9cecadb000e3884d6afe04e 245 Gene3D G3DSA:3.40.50.410 1 240 2.3E-55 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily DB29_01950 48e32ec2b9cecadb000e3884d6afe04e 245 Pfam PF00092 von Willebrand factor type A domain 6 54 3.8E-6 T 14-10-2018 IPR002035 von Willebrand factor, type A DB29_01950 48e32ec2b9cecadb000e3884d6afe04e 245 SUPERFAMILY SSF53300 132 230 4.75E-12 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily DB29_02660 378e2704424b7590584243421af55afe 158 Pfam PF11188 Protein of unknown function (DUF2975) 37 158 1.1E-35 T 14-10-2018 IPR021354 Protein of unknown function DUF2975 DB29_03830 e9cff8a6a097cb329462e0bd14c0ab0d 214 Pfam PF13460 NAD(P)H-binding 7 189 8.2E-50 T 14-10-2018 IPR016040 NAD(P)-binding domain DB29_03830 e9cff8a6a097cb329462e0bd14c0ab0d 214 Gene3D G3DSA:3.40.50.720 2 214 1.3E-53 T 14-10-2018 DB29_03830 e9cff8a6a097cb329462e0bd14c0ab0d 214 SUPERFAMILY SSF51735 2 204 1.82E-44 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_00640 932406ccdcf3fec126965ba60d1789c1 266 SUPERFAMILY SSF46955 4 108 5.13E-26 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily DB29_00640 932406ccdcf3fec126965ba60d1789c1 266 Gene3D G3DSA:1.10.1660.10 2 139 1.3E-29 T 14-10-2018 DB29_00640 932406ccdcf3fec126965ba60d1789c1 266 Pfam PF13411 MerR HTH family regulatory protein 5 71 4.5E-17 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DB29_00640 932406ccdcf3fec126965ba60d1789c1 266 SMART SM00422 5 73 9.9E-24 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DB29_0P0004 2543b204514a9da8a53da1f7c89a0c98 207 Gene3D G3DSA:1.10.10.60 147 204 6.1E-15 T 14-10-2018 DB29_0P0004 2543b204514a9da8a53da1f7c89a0c98 207 SUPERFAMILY SSF53041 1 146 1.7E-31 T 14-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 DB29_0P0004 2543b204514a9da8a53da1f7c89a0c98 207 SMART SM00857 2 146 4.2E-34 T 14-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 DB29_0P0004 2543b204514a9da8a53da1f7c89a0c98 207 Gene3D G3DSA:3.40.50.1390 1 127 8.2E-32 T 14-10-2018 DB29_0P0004 2543b204514a9da8a53da1f7c89a0c98 207 Pfam PF02796 Helix-turn-helix domain of resolvase 150 198 8.4E-7 T 14-10-2018 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 DB29_0P0004 2543b204514a9da8a53da1f7c89a0c98 207 ProSitePatterns PS00397 Site-specific recombinases active site. 5 13 - T 14-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 DB29_0P0004 2543b204514a9da8a53da1f7c89a0c98 207 Pfam PF00239 Resolvase, N terminal domain 2 146 4.0E-27 T 14-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 DB29_03391 5cdba9ffe17101c77fd3f105cee87e0c 165 Gene3D G3DSA:3.30.70.920 56 152 8.4E-20 T 14-10-2018 DB29_03391 5cdba9ffe17101c77fd3f105cee87e0c 165 Gene3D G3DSA:1.10.10.10 1 55 1.3E-8 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_03391 5cdba9ffe17101c77fd3f105cee87e0c 165 SUPERFAMILY SSF46785 1 60 1.23E-8 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_03391 5cdba9ffe17101c77fd3f105cee87e0c 165 Pfam PF13412 Winged helix-turn-helix DNA-binding 2 48 1.4E-7 T 14-10-2018 DB29_03391 5cdba9ffe17101c77fd3f105cee87e0c 165 SUPERFAMILY SSF54909 66 146 1.34E-17 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel DB29_03391 5cdba9ffe17101c77fd3f105cee87e0c 165 SMART SM00344 2 113 5.4E-5 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 DB29_03391 5cdba9ffe17101c77fd3f105cee87e0c 165 Pfam PF01037 Lrp/AsnC ligand binding domain 71 144 7.9E-14 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain DB29_02884 2780fd763e7598c2176ba853feb65eb9 301 Pfam PF03466 LysR substrate binding domain 89 291 4.8E-45 T 14-10-2018 IPR005119 LysR, substrate-binding DB29_02884 2780fd763e7598c2176ba853feb65eb9 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 6.1E-20 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DB29_02884 2780fd763e7598c2176ba853feb65eb9 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 5.9E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DB29_02884 2780fd763e7598c2176ba853feb65eb9 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 5.9E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DB29_02884 2780fd763e7598c2176ba853feb65eb9 301 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 5.9E-9 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DB29_02884 2780fd763e7598c2176ba853feb65eb9 301 SUPERFAMILY SSF53850 89 296 1.71E-39 T 14-10-2018 DB29_02884 2780fd763e7598c2176ba853feb65eb9 301 Gene3D G3DSA:3.40.190.290 90 298 7.1E-48 T 14-10-2018 DB29_02884 2780fd763e7598c2176ba853feb65eb9 301 SUPERFAMILY SSF46785 1 84 1.03E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_02884 2780fd763e7598c2176ba853feb65eb9 301 Gene3D G3DSA:1.10.10.10 1 84 2.0E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_00771 e18440102bd07a643dc1d40f5262a21e 275 SUPERFAMILY SSF161098 2 275 6.15E-73 T 14-10-2018 IPR035906 MetI-like superfamily DB29_00771 e18440102bd07a643dc1d40f5262a21e 275 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 90 268 2.2E-22 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DB29_00771 e18440102bd07a643dc1d40f5262a21e 275 Gene3D G3DSA:1.10.3720.10 1 266 1.1E-61 T 14-10-2018 IPR035906 MetI-like superfamily DB29_03292 b3cd5ce628d13d0ed32c0c3167b059c0 244 Pfam PF12146 Serine aminopeptidase, S33 5 213 1.2E-17 T 14-10-2018 IPR022742 Serine aminopeptidase, S33 DB29_03292 b3cd5ce628d13d0ed32c0c3167b059c0 244 Gene3D G3DSA:3.40.50.1820 3 230 4.3E-56 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DB29_03292 b3cd5ce628d13d0ed32c0c3167b059c0 244 SUPERFAMILY SSF53474 5 231 2.53E-39 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DB29_03292 b3cd5ce628d13d0ed32c0c3167b059c0 244 PIRSF PIRSF017388 1 233 4.7E-59 T 14-10-2018 IPR012354 Esterase/lipase GO:0052689 DB29_02072 cd726b72dd7b830f085554daa33bf419 210 SUPERFAMILY SSF53163 24 193 9.68E-47 T 14-10-2018 IPR023430 Peptidase HybD-like domain superfamily DB29_02072 cd726b72dd7b830f085554daa33bf419 210 TIGRFAM TIGR02841 spore_YyaC: putative sporulation protein YyaC 42 181 1.2E-66 T 14-10-2018 IPR009665 Protein of unknown function DUF1256 DB29_02072 cd726b72dd7b830f085554daa33bf419 210 Pfam PF06866 Protein of unknown function (DUF1256) 18 179 5.6E-58 T 14-10-2018 IPR009665 Protein of unknown function DUF1256 DB29_00745 75444e71aea920aef7f790b529e63be8 332 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 235 321 1.3E-26 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DB29_00745 75444e71aea920aef7f790b529e63be8 332 Gene3D G3DSA:3.40.50.300 4 332 1.1E-104 T 14-10-2018 DB29_00745 75444e71aea920aef7f790b529e63be8 332 SMART SM00382 42 234 1.5E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_00745 75444e71aea920aef7f790b529e63be8 332 SUPERFAMILY SSF52540 6 256 1.74E-76 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_00745 75444e71aea920aef7f790b529e63be8 332 Pfam PF00005 ABC transporter 34 184 4.9E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB29_00745 75444e71aea920aef7f790b529e63be8 332 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB29_00745 75444e71aea920aef7f790b529e63be8 332 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 236 301 1.0E-16 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DB29_00859 17bd0a2279b578ddf42164d883f01dda 599 SUPERFAMILY SSF158472 324 371 1.96E-8 T 14-10-2018 DB29_00859 17bd0a2279b578ddf42164d883f01dda 599 Gene3D G3DSA:3.30.565.10 448 597 9.5E-20 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB29_00859 17bd0a2279b578ddf42164d883f01dda 599 SMART SM00387 486 595 5.8E-6 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DB29_00859 17bd0a2279b578ddf42164d883f01dda 599 Gene3D G3DSA:1.20.1480.50 281 379 1.6E-10 T 14-10-2018 DB29_00859 17bd0a2279b578ddf42164d883f01dda 599 Pfam PF00672 HAMP domain 325 369 3.7E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DB29_00859 17bd0a2279b578ddf42164d883f01dda 599 SUPERFAMILY SSF55874 446 592 1.02E-19 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB29_00859 17bd0a2279b578ddf42164d883f01dda 599 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 492 594 4.7E-10 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DB29_00859 17bd0a2279b578ddf42164d883f01dda 599 SMART SM00304 321 373 1.0E-9 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DB29_00859 17bd0a2279b578ddf42164d883f01dda 599 Pfam PF06580 Histidine kinase 392 471 3.4E-23 T 14-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 DB29_03185 a44f2d80deca03e0cfd45c4c383514b5 334 Gene3D G3DSA:1.10.620.20 3 293 3.4E-111 T 14-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 DB29_03185 a44f2d80deca03e0cfd45c4c383514b5 334 ProSitePatterns PS00368 Ribonucleotide reductase small subunit signature. 96 113 - T 14-10-2018 IPR030475 Ribonucleotide reductase small subunit, acitve site KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 DB29_03185 a44f2d80deca03e0cfd45c4c383514b5 334 Pfam PF00268 Ribonucleotide reductase, small chain 8 284 1.4E-83 T 14-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 DB29_03185 a44f2d80deca03e0cfd45c4c383514b5 334 TIGRFAM TIGR04171 RNR_1b_NrdF: ribonucleoside-diphosphate reductase, class 1b, beta subunit 5 322 5.9E-146 T 14-10-2018 IPR026494 Ribonucleoside reductase subunit beta, NrdF GO:0005971|GO:0009263 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 DB29_03185 a44f2d80deca03e0cfd45c4c383514b5 334 SUPERFAMILY SSF47240 3 320 2.11E-92 T 14-10-2018 IPR009078 Ferritin-like superfamily DB29_03185 a44f2d80deca03e0cfd45c4c383514b5 334 PIRSF PIRSF000355 1 319 2.9E-92 T 14-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 DB29_02436 7450390f4bd249fb659c0fa2a6641a1d 122 Pfam PF13411 MerR HTH family regulatory protein 1 70 1.7E-17 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DB29_02436 7450390f4bd249fb659c0fa2a6641a1d 122 SMART SM00422 1 72 1.7E-15 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DB29_02436 7450390f4bd249fb659c0fa2a6641a1d 122 SUPERFAMILY SSF46955 1 109 3.37E-24 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily DB29_02436 7450390f4bd249fb659c0fa2a6641a1d 122 Gene3D G3DSA:1.10.1660.10 1 116 1.9E-24 T 14-10-2018 DB29_03146 13940025907e64a29b82dc16e80829c0 332 Gene3D G3DSA:2.40.10.240 63 155 1.7E-69 T 14-10-2018 DB29_03146 13940025907e64a29b82dc16e80829c0 332 Pfam PF02547 Queuosine biosynthesis protein 7 326 3.4E-69 T 14-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 DB29_03146 13940025907e64a29b82dc16e80829c0 332 Gene3D G3DSA:3.40.1780.10 20 325 1.7E-69 T 14-10-2018 DB29_03146 13940025907e64a29b82dc16e80829c0 332 SUPERFAMILY SSF111337 11 326 6.93E-79 T 14-10-2018 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 DB29_02805 e0a6cd6099c7c74e9e70ed7bb8145980 488 Gene3D G3DSA:3.40.1190.10 98 331 1.1E-68 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 DB29_02805 e0a6cd6099c7c74e9e70ed7bb8145980 488 ProSitePatterns PS01011 Folylpolyglutamate synthase signature 1. 105 128 - T 14-10-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 DB29_02805 e0a6cd6099c7c74e9e70ed7bb8145980 488 Pfam PF02875 Mur ligase family, glutamate ligase domain 327 409 1.4E-11 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 DB29_02805 e0a6cd6099c7c74e9e70ed7bb8145980 488 Gene3D G3DSA:3.40.1390.10 3 97 4.0E-29 T 14-10-2018 DB29_02805 e0a6cd6099c7c74e9e70ed7bb8145980 488 Gene3D G3DSA:3.90.190.20 332 485 4.4E-37 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 DB29_02805 e0a6cd6099c7c74e9e70ed7bb8145980 488 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 22 463 2.3E-128 T 14-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 DB29_02805 e0a6cd6099c7c74e9e70ed7bb8145980 488 Pfam PF08245 Mur ligase middle domain 107 306 1.1E-45 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 DB29_02805 e0a6cd6099c7c74e9e70ed7bb8145980 488 SUPERFAMILY SSF53244 327 460 4.58E-32 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 DB29_02805 e0a6cd6099c7c74e9e70ed7bb8145980 488 SUPERFAMILY SSF63418 3 96 1.83E-23 T 14-10-2018 IPR035911 MurE/MurF, N-terminal DB29_02805 e0a6cd6099c7c74e9e70ed7bb8145980 488 SUPERFAMILY SSF53623 100 326 4.97E-61 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 DB29_02805 e0a6cd6099c7c74e9e70ed7bb8145980 488 Pfam PF01225 Mur ligase family, catalytic domain 23 95 1.8E-14 T 14-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 DB29_02805 e0a6cd6099c7c74e9e70ed7bb8145980 488 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 1 486 26.571 T 14-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 DB29_01935 8ae0b1b9914ad0184a3b5b751f7e7438 499 SUPERFAMILY SSF55681 154 493 1.53E-125 T 14-10-2018 DB29_01935 8ae0b1b9914ad0184a3b5b751f7e7438 499 Gene3D G3DSA:3.30.930.10 148 492 2.0E-139 T 14-10-2018 DB29_01935 8ae0b1b9914ad0184a3b5b751f7e7438 499 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 13 496 45.898 T 14-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 DB29_01935 8ae0b1b9914ad0184a3b5b751f7e7438 499 Gene3D G3DSA:2.40.50.140 8 147 1.7E-43 T 14-10-2018 DB29_01935 8ae0b1b9914ad0184a3b5b751f7e7438 499 PRINTS PR00982 Lysyl-tRNA synthetase signature 191 201 4.0E-40 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 DB29_01935 8ae0b1b9914ad0184a3b5b751f7e7438 499 PRINTS PR00982 Lysyl-tRNA synthetase signature 377 393 4.0E-40 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 DB29_01935 8ae0b1b9914ad0184a3b5b751f7e7438 499 PRINTS PR00982 Lysyl-tRNA synthetase signature 207 223 4.0E-40 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 DB29_01935 8ae0b1b9914ad0184a3b5b751f7e7438 499 PRINTS PR00982 Lysyl-tRNA synthetase signature 254 271 4.0E-40 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 DB29_01935 8ae0b1b9914ad0184a3b5b751f7e7438 499 PRINTS PR00982 Lysyl-tRNA synthetase signature 236 249 4.0E-40 T 14-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 DB29_01935 8ae0b1b9914ad0184a3b5b751f7e7438 499 Pfam PF01336 OB-fold nucleic acid binding domain 61 138 2.0E-12 T 14-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 DB29_01935 8ae0b1b9914ad0184a3b5b751f7e7438 499 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 9 495 6.4E-223 T 14-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 DB29_01935 8ae0b1b9914ad0184a3b5b751f7e7438 499 PIRSF PIRSF039101 2 499 1.7E-204 T 14-10-2018 IPR034762 Bacterial/eukaryotic lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 DB29_01935 8ae0b1b9914ad0184a3b5b751f7e7438 499 SUPERFAMILY SSF50249 6 147 4.41E-43 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DB29_01935 8ae0b1b9914ad0184a3b5b751f7e7438 499 Pfam PF00152 tRNA synthetases class II (D, K and N) 155 492 2.3E-85 T 14-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 DB29_01988 010f59c4212721c2ecc23fca7caeffb7 567 Pfam PF11738 Protein of unknown function (DUF3298) 471 544 1.9E-16 T 14-10-2018 IPR021729 Domain of unknown function DUF3298 DB29_01988 010f59c4212721c2ecc23fca7caeffb7 567 Gene3D G3DSA:3.90.640.20 469 561 7.4E-21 T 14-10-2018 IPR037126 PdaC/RsiV-like superfamily DB29_01988 010f59c4212721c2ecc23fca7caeffb7 567 Pfam PF14903 WG containing repeat 193 222 3.5E-6 T 14-10-2018 IPR032774 WG containing repeat DB29_01988 010f59c4212721c2ecc23fca7caeffb7 567 Pfam PF14903 WG containing repeat 124 154 5.8E-7 T 14-10-2018 IPR032774 WG containing repeat DB29_01988 010f59c4212721c2ecc23fca7caeffb7 567 Pfam PF14903 WG containing repeat 274 303 0.0025 T 14-10-2018 IPR032774 WG containing repeat DB29_01988 010f59c4212721c2ecc23fca7caeffb7 567 Pfam PF14903 WG containing repeat 230 256 0.0018 T 14-10-2018 IPR032774 WG containing repeat DB29_01988 010f59c4212721c2ecc23fca7caeffb7 567 Pfam PF14903 WG containing repeat 21 55 1.3E-6 T 14-10-2018 IPR032774 WG containing repeat DB29_01988 010f59c4212721c2ecc23fca7caeffb7 567 Pfam PF14903 WG containing repeat 57 87 9.7E-4 T 14-10-2018 IPR032774 WG containing repeat DB29_01988 010f59c4212721c2ecc23fca7caeffb7 567 Gene3D G3DSA:3.30.565.40 374 466 5.1E-10 T 14-10-2018 DB29_03424 dc464b0085e2c0262830280c6455c7ca 255 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 77 251 4.1E-26 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DB29_03424 dc464b0085e2c0262830280c6455c7ca 255 SUPERFAMILY SSF161098 57 246 7.33E-29 T 14-10-2018 IPR035906 MetI-like superfamily DB29_03424 dc464b0085e2c0262830280c6455c7ca 255 Gene3D G3DSA:1.10.3720.10 52 253 3.6E-25 T 14-10-2018 IPR035906 MetI-like superfamily DB29_03718 e096908795a0ce40e4c86518ccab150e 316 Gene3D G3DSA:3.40.50.300 4 316 1.1E-88 T 14-10-2018 DB29_03718 e096908795a0ce40e4c86518ccab150e 316 TIGRFAM TIGR00554 panK_bact: pantothenate kinase 13 316 7.8E-130 T 14-10-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 DB29_03718 e096908795a0ce40e4c86518ccab150e 316 Hamap MF_00215 Pantothenate kinase [coaA]. 1 316 156.132 T 14-10-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 DB29_03718 e096908795a0ce40e4c86518ccab150e 316 SUPERFAMILY SSF52540 12 316 5.08E-69 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_03718 e096908795a0ce40e4c86518ccab150e 316 PIRSF PIRSF000545 2 316 2.5E-134 T 14-10-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 DB29_03718 e096908795a0ce40e4c86518ccab150e 316 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 91 243 7.0E-13 T 14-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 DB29_00547 e87d8e9c6a46f960413a8789237c1ec2 279 PIRSF PIRSF006648 10 279 3.0E-73 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 DB29_00547 e87d8e9c6a46f960413a8789237c1ec2 279 Pfam PF01061 ABC-2 type transporter 37 243 8.7E-27 T 14-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 DB29_02817 6555577cec5358c82438e4d5f4bfab89 387 Gene3D G3DSA:1.10.3860.10 1 379 1.1E-50 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 DB29_02817 6555577cec5358c82438e4d5f4bfab89 387 Pfam PF00375 Sodium:dicarboxylate symporter family 3 374 1.2E-75 T 14-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 DB29_02817 6555577cec5358c82438e4d5f4bfab89 387 SUPERFAMILY SSF118215 3 374 4.97E-76 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 DB29_02817 6555577cec5358c82438e4d5f4bfab89 387 PRINTS PR00173 Glutamate-aspartate symporter signature 1 18 1.0E-9 T 14-10-2018 DB29_02817 6555577cec5358c82438e4d5f4bfab89 387 PRINTS PR00173 Glutamate-aspartate symporter signature 330 350 1.0E-9 T 14-10-2018 DB29_02817 6555577cec5358c82438e4d5f4bfab89 387 PRINTS PR00173 Glutamate-aspartate symporter signature 68 93 1.0E-9 T 14-10-2018 DB29_02817 6555577cec5358c82438e4d5f4bfab89 387 PRINTS PR00173 Glutamate-aspartate symporter signature 265 291 1.0E-9 T 14-10-2018 DB29_02817 6555577cec5358c82438e4d5f4bfab89 387 PRINTS PR00173 Glutamate-aspartate symporter signature 39 59 1.0E-9 T 14-10-2018 DB29_01676 63adea4e854ed73900d286272c331445 424 Gene3D G3DSA:1.20.1250.20 7 423 1.1E-59 T 14-10-2018 DB29_01676 63adea4e854ed73900d286272c331445 424 ProSitePatterns PS00217 Sugar transport proteins signature 2. 108 133 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 DB29_01676 63adea4e854ed73900d286272c331445 424 SUPERFAMILY SSF103473 9 418 1.05E-62 T 14-10-2018 IPR036259 MFS transporter superfamily DB29_01676 63adea4e854ed73900d286272c331445 424 Pfam PF00083 Sugar (and other) transporter 52 417 9.4E-31 T 14-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 DB29_03980 9ec49b17081d26ff4dee73632a0ec1e4 109 Pfam PF04297 Putative helix-turn-helix protein, YlxM / p13 like 2 96 7.0E-40 T 14-10-2018 IPR007394 Putative helix-turn-helix protein, YlxM/p13-like DB29_03980 9ec49b17081d26ff4dee73632a0ec1e4 109 SUPERFAMILY SSF88659 1 91 1.7E-32 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like DB29_03980 9ec49b17081d26ff4dee73632a0ec1e4 109 Gene3D G3DSA:1.10.10.10 1 109 7.5E-37 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_03980 9ec49b17081d26ff4dee73632a0ec1e4 109 Hamap MF_00245 UPF0122 protein . 2 105 21.768 T 14-10-2018 IPR007394 Putative helix-turn-helix protein, YlxM/p13-like DB29_01901 ebd4ddbf04eb26b9500e6338efbba217 207 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 17 204 3.7E-86 T 14-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB29_01901 ebd4ddbf04eb26b9500e6338efbba217 207 SUPERFAMILY SSF52166 1 206 1.31E-88 T 14-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 DB29_01901 ebd4ddbf04eb26b9500e6338efbba217 207 Pfam PF00573 Ribosomal protein L4/L1 family 17 204 6.0E-77 T 14-10-2018 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 DB29_01901 ebd4ddbf04eb26b9500e6338efbba217 207 Gene3D G3DSA:3.40.1370.10 3 207 6.6E-89 T 14-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 DB29_01901 ebd4ddbf04eb26b9500e6338efbba217 207 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 9 207 38.622 T 14-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB29_00034 bed41588582c82de08639cfe71d9e0f4 605 Pfam PF06276 Ferric iron reductase FhuF-like transporter 411 570 7.3E-31 T 14-10-2018 IPR022770 Ferric iron reductase FhuF domain DB29_00034 bed41588582c82de08639cfe71d9e0f4 605 Pfam PF04183 IucA / IucC family 155 378 1.3E-50 T 14-10-2018 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal GO:0019290 DB29_00034 bed41588582c82de08639cfe71d9e0f4 605 Gene3D G3DSA:1.10.510.40 391 521 3.7E-10 T 14-10-2018 DB29_00766 61dad8a3e00f5b953c119dfb264d6852 533 Gene3D G3DSA:3.40.190.10 210 516 3.0E-143 T 14-10-2018 DB29_00766 61dad8a3e00f5b953c119dfb264d6852 533 PIRSF PIRSF002741 1 533 8.3E-115 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 DB29_00766 61dad8a3e00f5b953c119dfb264d6852 533 Gene3D G3DSA:3.90.76.10 52 209 3.0E-143 T 14-10-2018 DB29_00766 61dad8a3e00f5b953c119dfb264d6852 533 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 85 451 1.6E-93 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain DB29_00766 61dad8a3e00f5b953c119dfb264d6852 533 SUPERFAMILY SSF53850 41 529 1.36E-137 T 14-10-2018 DB29_00766 61dad8a3e00f5b953c119dfb264d6852 533 Gene3D G3DSA:3.10.105.10 286 506 3.0E-143 T 14-10-2018 DB29_00566 947c3f9c059abad10aa6d91c78b20070 193 Hamap MF_00772 Methylated-DNA--protein-cysteine methyltransferase [ogt]. 29 187 37.054 T 14-10-2018 IPR023546 Methylated-DNA--protein-cysteine methyltransferase GO:0003824|GO:0006281 DB29_00566 947c3f9c059abad10aa6d91c78b20070 193 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 108 187 6.5E-30 T 14-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 DB29_00566 947c3f9c059abad10aa6d91c78b20070 193 Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain 25 96 3.1E-5 T 14-10-2018 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 DB29_00566 947c3f9c059abad10aa6d91c78b20070 193 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 107 186 7.1E-35 T 14-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 DB29_00566 947c3f9c059abad10aa6d91c78b20070 193 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 157 163 - T 14-10-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 DB29_00566 947c3f9c059abad10aa6d91c78b20070 193 SUPERFAMILY SSF53155 25 110 8.24E-14 T 14-10-2018 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily GO:0003908|GO:0006281 Reactome: R-HSA-5657655 DB29_00566 947c3f9c059abad10aa6d91c78b20070 193 Gene3D G3DSA:3.30.160.70 25 103 3.9E-10 T 14-10-2018 DB29_00566 947c3f9c059abad10aa6d91c78b20070 193 SUPERFAMILY SSF46767 106 187 3.79E-30 T 14-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 DB29_00566 947c3f9c059abad10aa6d91c78b20070 193 Gene3D G3DSA:1.10.10.10 106 190 2.0E-33 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_03919 bbe260a41b79e59673a7fc0f7b668c9a 430 Pfam PF14450 Cell division protein FtsA 204 365 1.3E-22 T 14-10-2018 DB29_03919 bbe260a41b79e59673a7fc0f7b668c9a 430 Gene3D G3DSA:3.30.420.40 9 353 2.0E-111 T 14-10-2018 DB29_03919 bbe260a41b79e59673a7fc0f7b668c9a 430 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 6 368 3.1E-122 T 14-10-2018 IPR020823 Cell division protein FtsA DB29_03919 bbe260a41b79e59673a7fc0f7b668c9a 430 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 205 218 - T 14-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 DB29_03919 bbe260a41b79e59673a7fc0f7b668c9a 430 SUPERFAMILY SSF53067 4 191 7.13E-59 T 14-10-2018 DB29_03919 bbe260a41b79e59673a7fc0f7b668c9a 430 Gene3D G3DSA:3.90.640.10 232 297 2.0E-111 T 14-10-2018 DB29_03919 bbe260a41b79e59673a7fc0f7b668c9a 430 SMART SM00842 6 193 8.7E-94 T 14-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 DB29_03919 bbe260a41b79e59673a7fc0f7b668c9a 430 PIRSF PIRSF003101 1 429 5.9E-147 T 14-10-2018 IPR020823 Cell division protein FtsA DB29_03919 bbe260a41b79e59673a7fc0f7b668c9a 430 Gene3D G3DSA:3.30.1490.110 82 166 2.0E-111 T 14-10-2018 DB29_03919 bbe260a41b79e59673a7fc0f7b668c9a 430 Pfam PF02491 SHS2 domain inserted in FTSA 80 159 3.4E-27 T 14-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 DB29_03919 bbe260a41b79e59673a7fc0f7b668c9a 430 Gene3D G3DSA:3.30.420.40 194 348 2.0E-111 T 14-10-2018 DB29_03919 bbe260a41b79e59673a7fc0f7b668c9a 430 Hamap MF_02033 Cell division protein FtsA [ftsA]. 2 429 30.341 T 14-10-2018 IPR020823 Cell division protein FtsA DB29_03919 bbe260a41b79e59673a7fc0f7b668c9a 430 SUPERFAMILY SSF53067 196 367 3.51E-43 T 14-10-2018 DB29_03919 bbe260a41b79e59673a7fc0f7b668c9a 430 Pfam PF14450 Cell division protein FtsA 8 177 3.9E-9 T 14-10-2018 DB29_03005 c0b55eeb844a6c38b5f25030a133361c 281 Gene3D G3DSA:1.10.3720.10 2 272 8.1E-70 T 14-10-2018 IPR035906 MetI-like superfamily DB29_03005 c0b55eeb844a6c38b5f25030a133361c 281 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 101 273 3.0E-23 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DB29_03005 c0b55eeb844a6c38b5f25030a133361c 281 SUPERFAMILY SSF161098 8 280 1.57E-68 T 14-10-2018 IPR035906 MetI-like superfamily DB29_00216 48158073bef0fc7c11a8e4441866008e 214 PIRSF PIRSF038973 1 214 2.2E-73 T 14-10-2018 IPR014196 Stage II sporulation protein M DB29_00216 48158073bef0fc7c11a8e4441866008e 214 Pfam PF01944 Stage II sporulation protein M 26 204 2.1E-25 T 14-10-2018 IPR002798 Stage II sporulation protein M-like DB29_00216 48158073bef0fc7c11a8e4441866008e 214 TIGRFAM TIGR02831 spo_II_M: stage II sporulation protein M 10 208 5.3E-74 T 14-10-2018 IPR014196 Stage II sporulation protein M DB29_00717 d7bfa1d34c8343f26d13e74bc12b7492 161 PIRSF PIRSF000303 1 161 4.2E-63 T 14-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 DB29_00717 d7bfa1d34c8343f26d13e74bc12b7492 161 ProSitePatterns PS00763 Glutathione peroxidases signature 2. 59 66 - T 14-10-2018 IPR029760 Glutathione peroxidase conserved site Reactome: R-HSA-3299685 DB29_00717 d7bfa1d34c8343f26d13e74bc12b7492 161 PRINTS PR01011 Glutathione peroxidase family signature 21 38 2.1E-15 T 14-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 DB29_00717 d7bfa1d34c8343f26d13e74bc12b7492 161 PRINTS PR01011 Glutathione peroxidase family signature 56 72 2.1E-15 T 14-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 DB29_00717 d7bfa1d34c8343f26d13e74bc12b7492 161 PRINTS PR01011 Glutathione peroxidase family signature 121 130 2.1E-15 T 14-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 DB29_00717 d7bfa1d34c8343f26d13e74bc12b7492 161 SUPERFAMILY SSF52833 2 157 2.52E-56 T 14-10-2018 IPR036249 Thioredoxin-like superfamily DB29_00717 d7bfa1d34c8343f26d13e74bc12b7492 161 ProSitePatterns PS00460 Glutathione peroxidases active site. 23 38 - T 14-10-2018 IPR029759 Glutathione peroxidase active site Reactome: R-HSA-3299685 DB29_00717 d7bfa1d34c8343f26d13e74bc12b7492 161 Pfam PF00255 Glutathione peroxidase 3 110 2.1E-37 T 14-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 DB29_00717 d7bfa1d34c8343f26d13e74bc12b7492 161 Gene3D G3DSA:3.40.30.10 1 161 3.9E-66 T 14-10-2018 DB29_01526 6834904d212ad03759d3bbab610bfcb6 447 Gene3D G3DSA:3.40.50.720 212 439 1.0E-57 T 14-10-2018 DB29_01526 6834904d212ad03759d3bbab610bfcb6 447 PIRSF PIRSF000124 15 435 1.2E-72 T 14-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 DB29_01526 6834904d212ad03759d3bbab610bfcb6 447 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 16 192 6.4E-43 T 14-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 DB29_01526 6834904d212ad03759d3bbab610bfcb6 447 SUPERFAMILY SSF48179 212 303 4.76E-29 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 DB29_01526 6834904d212ad03759d3bbab610bfcb6 447 SUPERFAMILY SSF51735 16 205 7.67E-42 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_01526 6834904d212ad03759d3bbab610bfcb6 447 Gene3D G3DSA:3.40.50.720 3 207 1.1E-62 T 14-10-2018 DB29_01526 6834904d212ad03759d3bbab610bfcb6 447 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 330 423 1.8E-19 T 14-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 DB29_01526 6834904d212ad03759d3bbab610bfcb6 447 SMART SM00984 329 424 3.7E-29 T 14-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 DB29_01526 6834904d212ad03759d3bbab610bfcb6 447 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 16 420 3.2E-125 T 14-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 DB29_01526 6834904d212ad03759d3bbab610bfcb6 447 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 213 303 8.1E-28 T 14-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 DB29_01526 6834904d212ad03759d3bbab610bfcb6 447 SUPERFAMILY SSF52413 314 422 3.66E-24 T 14-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 DB29_01526 6834904d212ad03759d3bbab610bfcb6 447 PIRSF PIRSF500136 5 437 1.8E-145 T 14-10-2018 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 DB29_00657 a8496f0af7638eeb0144023e18743019 794 Pfam PF11962 Peptidase_G2, IMC autoproteolytic cleavage domain 560 794 6.1E-97 T 14-10-2018 IPR021865 Peptidase G2, IMC autoproteolytic cleavage domain DB29_00657 a8496f0af7638eeb0144023e18743019 794 SUPERFAMILY SSF51126 46 282 4.56E-26 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor DB29_00657 a8496f0af7638eeb0144023e18743019 794 Gene3D G3DSA:2.160.20.10 14 477 2.1E-116 T 14-10-2018 IPR012334 Pectin lyase fold DB29_00657 a8496f0af7638eeb0144023e18743019 794 SMART SM00710 240 261 60.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat DB29_00657 a8496f0af7638eeb0144023e18743019 794 SMART SM00710 366 390 4600.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat DB29_00657 a8496f0af7638eeb0144023e18743019 794 SMART SM00710 149 171 8900.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat DB29_00657 a8496f0af7638eeb0144023e18743019 794 SMART SM00710 395 418 57.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat DB29_00657 a8496f0af7638eeb0144023e18743019 794 SMART SM00710 189 211 2400.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat DB29_00657 a8496f0af7638eeb0144023e18743019 794 SMART SM00710 115 137 3300.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat DB29_00657 a8496f0af7638eeb0144023e18743019 794 SMART SM00710 212 238 330.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat DB29_00657 a8496f0af7638eeb0144023e18743019 794 SMART SM00710 420 457 1700.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat DB29_00657 a8496f0af7638eeb0144023e18743019 794 Gene3D G3DSA:2.40.300.10 616 792 1.1E-60 T 14-10-2018 DB29_00657 a8496f0af7638eeb0144023e18743019 794 Gene3D G3DSA:4.10.80.40 669 722 1.1E-60 T 14-10-2018 DB29_04287 6929b25817a3c08f47aeee4c8346d66a 266 Pfam PF01909 Nucleotidyltransferase domain 39 88 5.5E-5 T 14-10-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 DB29_04287 6929b25817a3c08f47aeee4c8346d66a 266 SUPERFAMILY SSF81301 37 98 1.7E-10 T 14-10-2018 DB29_04287 6929b25817a3c08f47aeee4c8346d66a 266 Gene3D G3DSA:3.30.460.10 21 127 4.0E-9 T 14-10-2018 DB29_04269 83e7b00f9c121cd1a93d35edbfca1317 516 Pfam PF02378 Phosphotransferase system, EIIC 15 356 6.2E-57 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 DB29_04269 83e7b00f9c121cd1a93d35edbfca1317 516 SUPERFAMILY SSF55604 442 513 6.02E-17 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 DB29_04269 83e7b00f9c121cd1a93d35edbfca1317 516 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 415 498 3.0E-15 T 14-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 DB29_04269 83e7b00f9c121cd1a93d35edbfca1317 516 Gene3D G3DSA:3.30.1360.60 438 516 1.1E-21 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 DB29_04269 83e7b00f9c121cd1a93d35edbfca1317 516 Pfam PF00367 phosphotransferase system, EIIB 445 479 4.1E-12 T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 DB29_04269 83e7b00f9c121cd1a93d35edbfca1317 516 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 455 472 - T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 DB29_02929 8ebc560053b3681a4e83c9dbae9c7c5d 637 Gene3D G3DSA:3.40.1110.10 344 464 4.3E-85 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 DB29_02929 8ebc560053b3681a4e83c9dbae9c7c5d 637 SUPERFAMILY SSF81660 344 467 8.83E-26 T 14-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 DB29_02929 8ebc560053b3681a4e83c9dbae9c7c5d 637 SUPERFAMILY SSF81653 135 232 8.89E-26 T 14-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 DB29_02929 8ebc560053b3681a4e83c9dbae9c7c5d 637 Gene3D G3DSA:3.40.50.1000 314 583 4.3E-85 T 14-10-2018 IPR023214 HAD superfamily DB29_02929 8ebc560053b3681a4e83c9dbae9c7c5d 637 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 82 634 1.0E-179 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 DB29_02929 8ebc560053b3681a4e83c9dbae9c7c5d 637 SUPERFAMILY SSF81665 72 610 8.89E-16 T 14-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 DB29_02929 8ebc560053b3681a4e83c9dbae9c7c5d 637 SUPERFAMILY SSF56784 332 631 2.42E-56 T 14-10-2018 IPR036412 HAD-like superfamily DB29_02929 8ebc560053b3681a4e83c9dbae9c7c5d 637 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 105 608 1.6E-82 T 14-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 DB29_02929 8ebc560053b3681a4e83c9dbae9c7c5d 637 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 182 196 9.8E-30 T 14-10-2018 DB29_02929 8ebc560053b3681a4e83c9dbae9c7c5d 637 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 479 489 9.8E-30 T 14-10-2018 DB29_02929 8ebc560053b3681a4e83c9dbae9c7c5d 637 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 555 567 9.8E-30 T 14-10-2018 DB29_02929 8ebc560053b3681a4e83c9dbae9c7c5d 637 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 333 347 9.8E-30 T 14-10-2018 DB29_02929 8ebc560053b3681a4e83c9dbae9c7c5d 637 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 457 468 9.8E-30 T 14-10-2018 DB29_02929 8ebc560053b3681a4e83c9dbae9c7c5d 637 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 532 551 9.8E-30 T 14-10-2018 DB29_02929 8ebc560053b3681a4e83c9dbae9c7c5d 637 Gene3D G3DSA:2.70.150.20 126 236 6.2E-34 T 14-10-2018 DB29_02929 8ebc560053b3681a4e83c9dbae9c7c5d 637 PRINTS PR00941 Cadmium-transporting ATPase signature 137 153 1.4E-13 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 DB29_02929 8ebc560053b3681a4e83c9dbae9c7c5d 637 PRINTS PR00941 Cadmium-transporting ATPase signature 117 137 1.4E-13 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 DB29_02929 8ebc560053b3681a4e83c9dbae9c7c5d 637 PRINTS PR00941 Cadmium-transporting ATPase signature 217 231 1.4E-13 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 DB29_02929 8ebc560053b3681a4e83c9dbae9c7c5d 637 PRINTS PR00941 Cadmium-transporting ATPase signature 62 74 1.4E-13 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 DB29_02929 8ebc560053b3681a4e83c9dbae9c7c5d 637 PRINTS PR00941 Cadmium-transporting ATPase signature 198 214 1.4E-13 T 14-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 DB29_02929 8ebc560053b3681a4e83c9dbae9c7c5d 637 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 335 341 - T 14-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 DB29_02929 8ebc560053b3681a4e83c9dbae9c7c5d 637 ProSitePatterns PS01229 Hypothetical cof family signature 2. 532 554 - T 14-10-2018 DB29_02929 8ebc560053b3681a4e83c9dbae9c7c5d 637 Pfam PF00702 haloacid dehalogenase-like hydrolase 329 546 6.7E-38 T 14-10-2018 DB29_02929 8ebc560053b3681a4e83c9dbae9c7c5d 637 Pfam PF00122 E1-E2 ATPase 132 312 4.3E-48 T 14-10-2018 DB29_01841 a49031ca202e34e7a760e2f7c04553b8 265 Gene3D G3DSA:1.10.1660.10 1 135 1.7E-27 T 14-10-2018 DB29_01841 a49031ca202e34e7a760e2f7c04553b8 265 SMART SM00422 2 71 1.1E-16 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DB29_01841 a49031ca202e34e7a760e2f7c04553b8 265 Pfam PF13411 MerR HTH family regulatory protein 3 70 2.7E-16 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DB29_01841 a49031ca202e34e7a760e2f7c04553b8 265 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 3 14 1.1E-5 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DB29_01841 a49031ca202e34e7a760e2f7c04553b8 265 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 38 58 1.1E-5 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DB29_01841 a49031ca202e34e7a760e2f7c04553b8 265 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 14 27 1.1E-5 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DB29_01841 a49031ca202e34e7a760e2f7c04553b8 265 SUPERFAMILY SSF46955 3 113 1.94E-24 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily DB29_03325 4ed455ef0aaec2e27513b4fba1446a1a 465 SUPERFAMILY SSF101960 32 462 1.16E-139 T 14-10-2018 IPR037284 SUF system FeS cluster assembly, SufBD superfamily DB29_03325 4ed455ef0aaec2e27513b4fba1446a1a 465 TIGRFAM TIGR01980 sufB: FeS assembly protein SufB 10 456 4.8E-228 T 14-10-2018 IPR010231 SUF system FeS cluster assembly, SufB GO:0016226 DB29_03325 4ed455ef0aaec2e27513b4fba1446a1a 465 Pfam PF01458 Uncharacterized protein family (UPF0051) 211 436 2.7E-73 T 14-10-2018 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 DB29_03175 31bfa47950a173eaaddbba685b30a15d 323 Gene3D G3DSA:1.10.3720.10 75 323 4.8E-60 T 14-10-2018 IPR035906 MetI-like superfamily DB29_03175 31bfa47950a173eaaddbba685b30a15d 323 SUPERFAMILY SSF161098 79 307 1.7E-50 T 14-10-2018 IPR035906 MetI-like superfamily DB29_03175 31bfa47950a173eaaddbba685b30a15d 323 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 111 317 2.4E-14 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DB29_01166 979424737d38ed8f0b4d29e4934e55ad 351 TIGRFAM TIGR02089 TTC: tartrate dehydrogenase 1 348 1.7E-182 T 14-10-2018 IPR011829 Tartrate dehydrogenase GO:0016616|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.93|KEGG: 00650+1.1.1.83 DB29_01166 979424737d38ed8f0b4d29e4934e55ad 351 SUPERFAMILY SSF53659 3 349 2.5E-115 T 14-10-2018 DB29_01166 979424737d38ed8f0b4d29e4934e55ad 351 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 5 347 5.7E-83 T 14-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 DB29_01166 979424737d38ed8f0b4d29e4934e55ad 351 SMART SM01329 5 345 8.9E-166 T 14-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 DB29_01166 979424737d38ed8f0b4d29e4934e55ad 351 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 239 258 - T 14-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 DB29_01166 979424737d38ed8f0b4d29e4934e55ad 351 Gene3D G3DSA:3.40.718.10 1 351 1.0E-126 T 14-10-2018 DB29_00102 be5c9e33173af30e6ff757f679403365 189 SUPERFAMILY SSF55620 3 185 8.15E-76 T 14-10-2018 DB29_00102 be5c9e33173af30e6ff757f679403365 189 Gene3D G3DSA:3.30.1130.10 53 187 1.8E-59 T 14-10-2018 DB29_00102 be5c9e33173af30e6ff757f679403365 189 Pfam PF01227 GTP cyclohydrolase I 8 184 1.3E-78 T 14-10-2018 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 DB29_00102 be5c9e33173af30e6ff757f679403365 189 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 63 79 - T 14-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 DB29_00102 be5c9e33173af30e6ff757f679403365 189 Gene3D G3DSA:1.10.286.10 1 52 1.9E-23 T 14-10-2018 DB29_00102 be5c9e33173af30e6ff757f679403365 189 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 8 185 1.3E-74 T 14-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 DB29_00102 be5c9e33173af30e6ff757f679403365 189 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 3 185 41.065 T 14-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 DB29_00102 be5c9e33173af30e6ff757f679403365 189 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 112 122 - T 14-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 DB29_02983 25039ba462ab879d2ece977efd711c78 284 Pfam PF08239 Bacterial SH3 domain 42 89 5.7E-11 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type DB29_02983 25039ba462ab879d2ece977efd711c78 284 SUPERFAMILY SSF53187 113 283 8.79E-59 T 14-10-2018 DB29_02983 25039ba462ab879d2ece977efd711c78 284 SMART SM00287 32 93 4.9E-8 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type DB29_02983 25039ba462ab879d2ece977efd711c78 284 Gene3D G3DSA:3.40.630.40 110 283 1.1E-63 T 14-10-2018 DB29_02983 25039ba462ab879d2ece977efd711c78 284 Gene3D G3DSA:2.30.30.40 31 101 1.4E-11 T 14-10-2018 DB29_02983 25039ba462ab879d2ece977efd711c78 284 SMART SM00646 172 282 3.8E-41 T 14-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 DB29_02983 25039ba462ab879d2ece977efd711c78 284 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 114 281 1.7E-57 T 14-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 DB29_00594 33caf38134ee493a7e0dae11a6778913 436 Pfam PF01471 Putative peptidoglycan binding domain 154 211 1.8E-10 T 14-10-2018 IPR002477 Peptidoglycan binding-like DB29_00594 33caf38134ee493a7e0dae11a6778913 436 Pfam PF01471 Putative peptidoglycan binding domain 86 139 6.0E-12 T 14-10-2018 IPR002477 Peptidoglycan binding-like DB29_00594 33caf38134ee493a7e0dae11a6778913 436 Pfam PF01471 Putative peptidoglycan binding domain 18 72 6.0E-11 T 14-10-2018 IPR002477 Peptidoglycan binding-like DB29_00594 33caf38134ee493a7e0dae11a6778913 436 Gene3D G3DSA:1.10.101.10 11 77 5.1E-14 T 14-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 DB29_00594 33caf38134ee493a7e0dae11a6778913 436 Gene3D G3DSA:1.10.101.10 143 215 2.3E-17 T 14-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 DB29_00594 33caf38134ee493a7e0dae11a6778913 436 Gene3D G3DSA:1.10.101.10 78 142 6.9E-14 T 14-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 DB29_00594 33caf38134ee493a7e0dae11a6778913 436 SUPERFAMILY SSF47090 145 212 1.02E-14 T 14-10-2018 IPR036365 PGBD-like superfamily DB29_00594 33caf38134ee493a7e0dae11a6778913 436 SUPERFAMILY SSF47090 77 140 5.23E-14 T 14-10-2018 IPR036365 PGBD-like superfamily DB29_00594 33caf38134ee493a7e0dae11a6778913 436 SUPERFAMILY SSF47090 14 76 2.46E-12 T 14-10-2018 IPR036365 PGBD-like superfamily DB29_03265 d46c9ea0ef07dd509d08cfd2888a50c3 220 SUPERFAMILY SSF161098 16 202 1.83E-32 T 14-10-2018 IPR035906 MetI-like superfamily DB29_03265 d46c9ea0ef07dd509d08cfd2888a50c3 220 Gene3D G3DSA:1.10.3720.10 13 211 7.0E-30 T 14-10-2018 IPR035906 MetI-like superfamily DB29_03265 d46c9ea0ef07dd509d08cfd2888a50c3 220 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 41 209 1.7E-21 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DB29_02041 a7e1312e585081539bf47f9f143b8da3 404 TIGRFAM TIGR01885 Orn_aminotrans: ornithine--oxo-acid transaminase 7 397 3.4E-165 T 14-10-2018 IPR010164 Ornithine aminotransferase GO:0004587 KEGG: 00330+2.6.1.13|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|MetaCyc: PWY-6922|Reactome: R-HSA-70614 DB29_02041 a7e1312e585081539bf47f9f143b8da3 404 Gene3D G3DSA:3.90.1150.10 25 387 9.1E-151 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DB29_02041 a7e1312e585081539bf47f9f143b8da3 404 Gene3D G3DSA:3.40.640.10 60 308 9.1E-151 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DB29_02041 a7e1312e585081539bf47f9f143b8da3 404 SUPERFAMILY SSF53383 5 398 6.72E-127 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DB29_02041 a7e1312e585081539bf47f9f143b8da3 404 Hamap MF_01689 Ornithine aminotransferase [rocD]. 6 398 65.642 T 14-10-2018 IPR034757 Ornithine aminotransferase, bacterial type GO:0004587 KEGG: 00330+2.6.1.13|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|MetaCyc: PWY-6922 DB29_02041 a7e1312e585081539bf47f9f143b8da3 404 Pfam PF00202 Aminotransferase class-III 17 396 5.2E-135 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DB29_02041 a7e1312e585081539bf47f9f143b8da3 404 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 225 262 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DB29_02041 a7e1312e585081539bf47f9f143b8da3 404 PIRSF PIRSF000521 171 400 3.5E-36 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DB29_02041 a7e1312e585081539bf47f9f143b8da3 404 PIRSF PIRSF000521 2 165 1.1E-8 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DB29_00257 146df0839763962de401d119123c8999 101 Pfam PF01381 Helix-turn-helix 6 60 5.9E-18 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DB29_00257 146df0839763962de401d119123c8999 101 SMART SM00530 5 60 8.4E-18 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DB29_00257 146df0839763962de401d119123c8999 101 SUPERFAMILY SSF47413 2 67 1.82E-18 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DB29_00257 146df0839763962de401d119123c8999 101 Gene3D G3DSA:1.10.260.40 1 64 1.9E-25 T 14-10-2018 DB29_02652 1c1ae1296a746d5073af4d8b8e2973eb 91 SUPERFAMILY SSF52794 1 90 6.02E-21 T 14-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 DB29_02652 1c1ae1296a746d5073af4d8b8e2973eb 91 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 3 76 2.4E-13 T 14-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 DB29_02652 1c1ae1296a746d5073af4d8b8e2973eb 91 Gene3D G3DSA:3.40.50.2300 1 91 1.0E-31 T 14-10-2018 DB29_01102 5a79528bb829ef3622a1fc9a351a9e19 79 Pfam PF02597 ThiS family 4 79 1.3E-15 T 14-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 DB29_01102 5a79528bb829ef3622a1fc9a351a9e19 79 TIGRFAM TIGR01682 moaD: molybdopterin converting factor, subunit 1 2 79 2.6E-22 T 14-10-2018 DB29_01102 5a79528bb829ef3622a1fc9a351a9e19 79 SUPERFAMILY SSF54285 1 79 3.92E-17 T 14-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp DB29_01102 5a79528bb829ef3622a1fc9a351a9e19 79 Gene3D G3DSA:3.10.20.30 1 79 7.6E-23 T 14-10-2018 IPR012675 Beta-grasp domain superfamily DB29_03915 aeb64631c6544ed675c12e6ba134d3dc 451 SUPERFAMILY SSF51984 10 99 1.05E-14 T 14-10-2018 DB29_03915 aeb64631c6544ed675c12e6ba134d3dc 451 Gene3D G3DSA:3.40.1190.10 101 307 1.8E-64 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 DB29_03915 aeb64631c6544ed675c12e6ba134d3dc 451 Pfam PF08245 Mur ligase middle domain 116 290 1.5E-34 T 14-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 DB29_03915 aeb64631c6544ed675c12e6ba134d3dc 451 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 10 447 35.319 T 14-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 DB29_03915 aeb64631c6544ed675c12e6ba134d3dc 451 Gene3D G3DSA:3.90.190.20 314 446 1.6E-42 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 DB29_03915 aeb64631c6544ed675c12e6ba134d3dc 451 Pfam PF02875 Mur ligase family, glutamate ligase domain 310 370 4.3E-9 T 14-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 DB29_03915 aeb64631c6544ed675c12e6ba134d3dc 451 SUPERFAMILY SSF53623 102 307 6.8E-54 T 14-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 DB29_03915 aeb64631c6544ed675c12e6ba134d3dc 451 SUPERFAMILY SSF53244 309 445 8.79E-42 T 14-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 DB29_03915 aeb64631c6544ed675c12e6ba134d3dc 451 Gene3D G3DSA:3.40.50.720 10 94 1.1E-26 T 14-10-2018 DB29_03915 aeb64631c6544ed675c12e6ba134d3dc 451 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 11 445 1.0E-133 T 14-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 DB29_02616 87370cd9db93afec653a254e961f0f30 323 Gene3D G3DSA:3.40.190.10 128 250 3.8E-88 T 14-10-2018 DB29_02616 87370cd9db93afec653a254e961f0f30 323 SUPERFAMILY SSF53850 118 288 1.16E-11 T 14-10-2018 DB29_02616 87370cd9db93afec653a254e961f0f30 323 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 52 319 1.3E-55 T 14-10-2018 IPR005064 Bordetella uptake gene GO:0030288 DB29_02616 87370cd9db93afec653a254e961f0f30 323 Gene3D G3DSA:3.40.190.150 33 314 3.8E-88 T 14-10-2018 DB29_02616 87370cd9db93afec653a254e961f0f30 323 PIRSF PIRSF017082 1 323 2.1E-94 T 14-10-2018 IPR005064 Bordetella uptake gene GO:0030288 DB29_03437 033c8037dfdb650079ea1d3ca747e05f 325 PIRSF PIRSF000102 7 324 5.1E-109 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 DB29_03437 033c8037dfdb650079ea1d3ca747e05f 325 SUPERFAMILY SSF51735 7 150 6.33E-52 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_03437 033c8037dfdb650079ea1d3ca747e05f 325 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 12 150 1.2E-46 T 14-10-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 DB29_03437 033c8037dfdb650079ea1d3ca747e05f 325 PRINTS PR00086 L-lactate dehydrogenase signature 12 36 8.0E-45 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 DB29_03437 033c8037dfdb650079ea1d3ca747e05f 325 PRINTS PR00086 L-lactate dehydrogenase signature 124 144 8.0E-45 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 DB29_03437 033c8037dfdb650079ea1d3ca747e05f 325 PRINTS PR00086 L-lactate dehydrogenase signature 178 191 8.0E-45 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 DB29_03437 033c8037dfdb650079ea1d3ca747e05f 325 PRINTS PR00086 L-lactate dehydrogenase signature 148 166 8.0E-45 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 DB29_03437 033c8037dfdb650079ea1d3ca747e05f 325 PRINTS PR00086 L-lactate dehydrogenase signature 37 61 8.0E-45 T 14-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 DB29_03437 033c8037dfdb650079ea1d3ca747e05f 325 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 153 318 5.2E-37 T 14-10-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 DB29_03437 033c8037dfdb650079ea1d3ca747e05f 325 Gene3D G3DSA:3.40.50.720 6 152 4.8E-55 T 14-10-2018 DB29_03437 033c8037dfdb650079ea1d3ca747e05f 325 Hamap MF_00488 L-lactate dehydrogenase [ldh]. 10 319 45.312 T 14-10-2018 IPR011304 L-lactate dehydrogenase GO:0004459|GO:0005737|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|Reactome: R-HSA-70268 DB29_03437 033c8037dfdb650079ea1d3ca747e05f 325 TIGRFAM TIGR01771 L-LDH-NAD: L-lactate dehydrogenase 15 312 1.9E-126 T 14-10-2018 IPR011304 L-lactate dehydrogenase GO:0004459|GO:0005737|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|Reactome: R-HSA-70268 DB29_03437 033c8037dfdb650079ea1d3ca747e05f 325 Gene3D G3DSA:3.90.110.10 153 325 1.4E-60 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 DB29_03437 033c8037dfdb650079ea1d3ca747e05f 325 SUPERFAMILY SSF56327 151 318 1.34E-56 T 14-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 DB29_03437 033c8037dfdb650079ea1d3ca747e05f 325 ProSitePatterns PS00064 L-lactate dehydrogenase active site. 180 186 - T 14-10-2018 IPR018177 L-lactate dehydrogenase, active site GO:0004459|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|Reactome: R-HSA-70268 DB29_00253 fa641c270f2a6408ac2079b412f45a3d 178 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 5 156 2.8E-64 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 DB29_00253 fa641c270f2a6408ac2079b412f45a3d 178 Pfam PF01625 Peptide methionine sulfoxide reductase 6 157 1.6E-60 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 DB29_00253 fa641c270f2a6408ac2079b412f45a3d 178 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 4 163 36.84 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 DB29_00253 fa641c270f2a6408ac2079b412f45a3d 178 Gene3D G3DSA:3.30.1060.10 1 164 8.9E-66 T 14-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 DB29_00253 fa641c270f2a6408ac2079b412f45a3d 178 SUPERFAMILY SSF55068 3 168 1.31E-72 T 14-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 DB29_04233 8e885e910fb9ee3bfa2a499e79289987 136 Gene3D G3DSA:3.30.2000.30 1 134 1.6E-37 T 14-10-2018 DB29_04233 8e885e910fb9ee3bfa2a499e79289987 136 Pfam PF11367 Protein of unknown function (DUF3168) 13 127 1.2E-20 T 14-10-2018 IPR021508 Tail completion protein DB29_01875 35ba0e43b45c76dbabfeb1be216dcc89 120 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 1 120 28.933 T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB29_01875 35ba0e43b45c76dbabfeb1be216dcc89 120 TIGRFAM TIGR00059 L17: ribosomal protein bL17 3 120 2.5E-47 T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB29_01875 35ba0e43b45c76dbabfeb1be216dcc89 120 Gene3D G3DSA:3.90.1030.10 1 120 3.8E-50 T 14-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB29_01875 35ba0e43b45c76dbabfeb1be216dcc89 120 SUPERFAMILY SSF64263 2 120 1.24E-45 T 14-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB29_01875 35ba0e43b45c76dbabfeb1be216dcc89 120 Pfam PF01196 Ribosomal protein L17 16 120 3.9E-40 T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB29_01875 35ba0e43b45c76dbabfeb1be216dcc89 120 ProSitePatterns PS01167 Ribosomal protein L17 signature. 30 52 - T 14-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB29_03598 75d266492a257fd01615b4d0b17b81b4 322 Pfam PF00581 Rhodanese-like domain 119 211 4.6E-10 T 14-10-2018 IPR001763 Rhodanese-like domain DB29_03598 75d266492a257fd01615b4d0b17b81b4 322 Gene3D G3DSA:3.40.250.10 101 251 1.6E-46 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily DB29_03598 75d266492a257fd01615b4d0b17b81b4 322 SUPERFAMILY SSF52821 103 248 1.78E-33 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily DB29_03598 75d266492a257fd01615b4d0b17b81b4 322 SMART SM00450 116 217 9.2E-21 T 14-10-2018 IPR001763 Rhodanese-like domain DB29_03598 75d266492a257fd01615b4d0b17b81b4 322 Hamap MF_00469 UPF0176 protein YceA [yceA]. 3 268 39.471 T 14-10-2018 IPR020936 Uncharacterised protein family UPF0176 DB29_03598 75d266492a257fd01615b4d0b17b81b4 322 Gene3D G3DSA:3.30.70.100 1 97 8.6E-28 T 14-10-2018 DB29_03598 75d266492a257fd01615b4d0b17b81b4 322 Pfam PF12368 Rhodanase C-terminal 223 289 7.2E-15 T 14-10-2018 IPR022111 Rhodanase, C-terminal DB29_00834 7afa967c05af4d4289b42c4741329c7f 317 Gene3D G3DSA:3.40.50.1360 54 316 1.6E-77 T 14-10-2018 DB29_00834 7afa967c05af4d4289b42c4741329c7f 317 SUPERFAMILY SSF100950 62 314 5.76E-67 T 14-10-2018 IPR037171 NagB/RpiA transferase-like DB29_00834 7afa967c05af4d4289b42c4741329c7f 317 SUPERFAMILY SSF46785 6 59 8.71E-7 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_00834 7afa967c05af4d4289b42c4741329c7f 317 Pfam PF13545 Crp-like helix-turn-helix domain 20 69 5.3E-7 T 14-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 DB29_00834 7afa967c05af4d4289b42c4741329c7f 317 Gene3D G3DSA:1.10.10.60 2 52 9.7E-22 T 14-10-2018 DB29_00834 7afa967c05af4d4289b42c4741329c7f 317 Pfam PF04198 Putative sugar-binding domain 62 312 6.7E-68 T 14-10-2018 IPR007324 Sugar-binding domain, putative GO:0030246 DB29_00175 f6562db3b69bc8eac18cc1db5ffff8c5 191 Gene3D G3DSA:1.10.10.10 2 82 3.0E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_00175 f6562db3b69bc8eac18cc1db5ffff8c5 191 Gene3D G3DSA:1.10.10.10 83 179 2.5E-36 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_00175 f6562db3b69bc8eac18cc1db5ffff8c5 191 Hamap MF_01804 Segregation and condensation protein B [scpB]. 1 183 33.774 T 14-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 DB29_00175 f6562db3b69bc8eac18cc1db5ffff8c5 191 SUPERFAMILY SSF46785 85 158 8.56E-24 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_00175 f6562db3b69bc8eac18cc1db5ffff8c5 191 Pfam PF04079 Segregation and condensation complex subunit ScpB 7 167 4.3E-53 T 14-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 DB29_00175 f6562db3b69bc8eac18cc1db5ffff8c5 191 TIGRFAM TIGR00281 TIGR00281: segregation and condensation protein B 7 185 5.8E-50 T 14-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 DB29_00175 f6562db3b69bc8eac18cc1db5ffff8c5 191 PIRSF PIRSF019345 1 189 3.5E-53 T 14-10-2018 IPR005234 Chromosome segregation/condensation protein ScpB GO:0051304 DB29_00175 f6562db3b69bc8eac18cc1db5ffff8c5 191 SUPERFAMILY SSF46785 6 79 2.3E-13 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_00545 6a454dc69c73534bbb4d22bd2dbc249e 157 SUPERFAMILY SSF109854 25 152 2.75E-19 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes DB29_00545 6a454dc69c73534bbb4d22bd2dbc249e 157 Pfam PF12867 DinB superfamily 26 146 2.6E-7 T 14-10-2018 IPR024775 DinB-like domain DB29_00545 6a454dc69c73534bbb4d22bd2dbc249e 157 Gene3D G3DSA:1.20.120.450 24 152 1.8E-17 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes DB29_03608 035ad809ffd67ba6e231477b781cbb69 576 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 438 457 - T 14-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 DB29_03608 035ad809ffd67ba6e231477b781cbb69 576 Gene3D G3DSA:3.40.50.970 12 191 2.7E-70 T 14-10-2018 DB29_03608 035ad809ffd67ba6e231477b781cbb69 576 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 401 549 5.9E-48 T 14-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 DB29_03608 035ad809ffd67ba6e231477b781cbb69 576 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 209 344 1.3E-43 T 14-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 DB29_03608 035ad809ffd67ba6e231477b781cbb69 576 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 21 181 8.0E-57 T 14-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 DB29_03608 035ad809ffd67ba6e231477b781cbb69 576 Gene3D G3DSA:3.40.50.1220 202 368 6.1E-61 T 14-10-2018 DB29_03608 035ad809ffd67ba6e231477b781cbb69 576 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 21 570 1.1E-252 T 14-10-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 DB29_03608 035ad809ffd67ba6e231477b781cbb69 576 SUPERFAMILY SSF52467 201 370 2.5E-61 T 14-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily DB29_03608 035ad809ffd67ba6e231477b781cbb69 576 SUPERFAMILY SSF52518 19 198 2.78E-61 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold DB29_03608 035ad809ffd67ba6e231477b781cbb69 576 Gene3D G3DSA:3.40.50.970 373 574 4.7E-68 T 14-10-2018 DB29_03608 035ad809ffd67ba6e231477b781cbb69 576 SUPERFAMILY SSF52518 379 571 5.53E-68 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold DB29_04042 5464f326c7c437974253fb0ec381c887 418 SUPERFAMILY SSF50156 172 264 1.16E-17 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 DB29_04042 5464f326c7c437974253fb0ec381c887 418 Pfam PF02163 Peptidase family M50 6 404 1.1E-73 T 14-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 DB29_04042 5464f326c7c437974253fb0ec381c887 418 SMART SM00228 180 256 0.0016 T 14-10-2018 IPR001478 PDZ domain GO:0005515 DB29_04042 5464f326c7c437974253fb0ec381c887 418 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 1 417 5.7E-96 T 14-10-2018 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 DB29_04042 5464f326c7c437974253fb0ec381c887 418 Pfam PF13180 PDZ domain 207 265 1.0E-11 T 14-10-2018 IPR001478 PDZ domain GO:0005515 DB29_04042 5464f326c7c437974253fb0ec381c887 418 Gene3D G3DSA:2.30.42.10 206 283 7.1E-19 T 14-10-2018 DB29_00388 b491e278f897a88fdf9f0ff89434f517 813 Gene3D G3DSA:3.50.50.60 7 303 3.2E-88 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB29_00388 b491e278f897a88fdf9f0ff89434f517 813 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 281 6.9E-55 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DB29_00388 b491e278f897a88fdf9f0ff89434f517 813 PRINTS PR00397 Sirohaem Fe-binding site signature 631 649 1.8E-6 T 14-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DB29_00388 b491e278f897a88fdf9f0ff89434f517 813 PRINTS PR00397 Sirohaem Fe-binding site signature 674 692 1.8E-6 T 14-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DB29_00388 b491e278f897a88fdf9f0ff89434f517 813 TIGRFAM TIGR02374 nitri_red_nirB: nitrite reductase [NAD(P)H], large subunit 6 792 0.0 T 14-10-2018 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB GO:0008942|GO:0042128|GO:0050660|GO:0050661|GO:0055114 DB29_00388 b491e278f897a88fdf9f0ff89434f517 813 Gene3D G3DSA:3.30.413.10 631 806 2.2E-37 T 14-10-2018 DB29_00388 b491e278f897a88fdf9f0ff89434f517 813 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 627 761 8.4E-27 T 14-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DB29_00388 b491e278f897a88fdf9f0ff89434f517 813 Gene3D G3DSA:3.50.50.60 115 239 3.2E-88 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB29_00388 b491e278f897a88fdf9f0ff89434f517 813 Gene3D G3DSA:3.90.480.10 562 630 2.6E-6 T 14-10-2018 DB29_00388 b491e278f897a88fdf9f0ff89434f517 813 SUPERFAMILY SSF56014 628 796 4.84E-51 T 14-10-2018 DB29_00388 b491e278f897a88fdf9f0ff89434f517 813 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 1.1E-20 T 14-10-2018 DB29_00388 b491e278f897a88fdf9f0ff89434f517 813 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 257 279 1.1E-20 T 14-10-2018 DB29_00388 b491e278f897a88fdf9f0ff89434f517 813 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 147 165 1.1E-20 T 14-10-2018 DB29_00388 b491e278f897a88fdf9f0ff89434f517 813 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 232 248 1.1E-20 T 14-10-2018 DB29_00388 b491e278f897a88fdf9f0ff89434f517 813 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 102 120 1.1E-20 T 14-10-2018 DB29_00388 b491e278f897a88fdf9f0ff89434f517 813 SUPERFAMILY SSF51905 5 192 1.22E-39 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB29_00388 b491e278f897a88fdf9f0ff89434f517 813 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 557 618 1.8E-13 T 14-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DB29_00388 b491e278f897a88fdf9f0ff89434f517 813 SUPERFAMILY SSF51905 147 306 2.85E-27 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB29_00388 b491e278f897a88fdf9f0ff89434f517 813 Gene3D G3DSA:3.30.390.30 319 399 5.7E-11 T 14-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 DB29_00388 b491e278f897a88fdf9f0ff89434f517 813 PIRSF PIRSF037149 1 811 0.0 T 14-10-2018 IPR017121 Nitrite reductase [NAD(P)H], large subunit GO:0042128 DB29_00388 b491e278f897a88fdf9f0ff89434f517 813 Pfam PF04324 BFD-like [2Fe-2S] binding domain 482 531 1.9E-11 T 14-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain DB29_00388 b491e278f897a88fdf9f0ff89434f517 813 Pfam PF04324 BFD-like [2Fe-2S] binding domain 419 468 1.2E-13 T 14-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain DB29_00388 b491e278f897a88fdf9f0ff89434f517 813 SUPERFAMILY SSF55124 519 636 1.45E-24 T 14-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 DB29_00388 b491e278f897a88fdf9f0ff89434f517 813 Gene3D G3DSA:1.10.10.1100 419 472 1.5E-8 T 14-10-2018 DB29_00388 b491e278f897a88fdf9f0ff89434f517 813 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 147 172 3.1E-10 T 14-10-2018 DB29_00388 b491e278f897a88fdf9f0ff89434f517 813 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 3.1E-10 T 14-10-2018 DB29_00388 b491e278f897a88fdf9f0ff89434f517 813 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 272 279 3.1E-10 T 14-10-2018 DB29_00388 b491e278f897a88fdf9f0ff89434f517 813 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 233 247 3.1E-10 T 14-10-2018 DB29_03551 c303639852b0200a384fd4a6c8f1e144 370 TIGRFAM TIGR03699 menaquin_MqnC: dehypoxanthine futalosine cyclase 14 353 6.3E-149 T 14-10-2018 IPR022431 Cyclic dehypoxanthine futalosine synthase GO:0009234 KEGG: 00130+1.21.98.1|MetaCyc: PWY-7371|MetaCyc: PWY-7374 DB29_03551 c303639852b0200a384fd4a6c8f1e144 370 Gene3D G3DSA:3.20.20.70 2 352 4.5E-54 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DB29_03551 c303639852b0200a384fd4a6c8f1e144 370 SUPERFAMILY SSF102114 13 344 2.88E-52 T 14-10-2018 DB29_03551 c303639852b0200a384fd4a6c8f1e144 370 Hamap MF_00992 Cyclic dehypoxanthine futalosine synthase [mqnC]. 13 356 49.828 T 14-10-2018 IPR022431 Cyclic dehypoxanthine futalosine synthase GO:0009234 KEGG: 00130+1.21.98.1|MetaCyc: PWY-7371|MetaCyc: PWY-7374 DB29_03551 c303639852b0200a384fd4a6c8f1e144 370 SMART SM00729 54 277 8.4E-4 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 DB29_03551 c303639852b0200a384fd4a6c8f1e144 370 Pfam PF04055 Radical SAM superfamily 59 229 4.2E-17 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 DB29_03551 c303639852b0200a384fd4a6c8f1e144 370 PIRSF PIRSF004762 1 364 1.3E-103 T 14-10-2018 DB29_03551 c303639852b0200a384fd4a6c8f1e144 370 TIGRFAM TIGR00423 TIGR00423: radical SAM domain protein, CofH subfamily 51 353 2.9E-102 T 14-10-2018 IPR020050 FO synthase, subunit 2 GO:0016765 KEGG: 00680+2.5.1.77 DB29_03746 dc7ea6b945ae7b377df55080c06b8cbc 115 Pfam PF07098 Protein of unknown function (DUF1360) 9 110 3.9E-37 T 14-10-2018 IPR010773 Mycobacterium phage PG1, Gp7 DB29_01951 3ffb6736ed06d80c992d618dcc621e28 840 SUPERFAMILY SSF81606 604 809 3.14E-21 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 DB29_01951 3ffb6736ed06d80c992d618dcc621e28 840 SMART SM00332 587 806 4.0E-4 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 DB29_01951 3ffb6736ed06d80c992d618dcc621e28 840 Gene3D G3DSA:3.60.40.10 589 831 4.5E-52 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 DB29_01951 3ffb6736ed06d80c992d618dcc621e28 840 SMART SM00331 595 808 5.1E-46 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 DB29_01951 3ffb6736ed06d80c992d618dcc621e28 840 TIGRFAM TIGR02865 spore_II_E: stage II sporulation protein E 51 808 1.2E-246 T 14-10-2018 IPR014221 Sporulation stage II, protein E KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 DB29_01951 3ffb6736ed06d80c992d618dcc621e28 840 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 623 808 1.5E-33 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 DB29_03948 70016ecdd3da47302d71627015eb9f2f 568 Pfam PF05670 Domain of unknown function (DUF814) 452 536 1.2E-27 T 14-10-2018 IPR008532 Domain of unknown function DUF814 DB29_03948 70016ecdd3da47302d71627015eb9f2f 568 Gene3D G3DSA:2.30.310.10 1 166 2.9E-69 T 14-10-2018 DB29_03948 70016ecdd3da47302d71627015eb9f2f 568 Gene3D G3DSA:1.10.8.50 167 235 2.0E-21 T 14-10-2018 DB29_03948 70016ecdd3da47302d71627015eb9f2f 568 Pfam PF05833 Fibronectin-binding protein A N-terminus (FbpA) 4 442 4.7E-166 T 14-10-2018 DB29_03948 70016ecdd3da47302d71627015eb9f2f 568 Gene3D G3DSA:3.40.970.40 241 287 2.5E-10 T 14-10-2018 DB29_03867 3f7dcd1e42a684935ff925c39e9616b5 211 Gene3D G3DSA:3.30.930.20 3 208 1.1E-80 T 14-10-2018 DB29_03867 3f7dcd1e42a684935ff925c39e9616b5 211 Hamap MF_01851 UPF0637 protein . 5 202 40.443 T 14-10-2018 IPR009403 Protein of unknown function UPF0637 DB29_03867 3f7dcd1e42a684935ff925c39e9616b5 211 SUPERFAMILY SSF142913 5 203 4.18E-80 T 14-10-2018 DB29_03867 3f7dcd1e42a684935ff925c39e9616b5 211 PIRSF PIRSF021332 1 206 3.3E-94 T 14-10-2018 IPR009403 Protein of unknown function UPF0637 DB29_03867 3f7dcd1e42a684935ff925c39e9616b5 211 Pfam PF06335 Protein of unknown function (DUF1054) 6 200 3.2E-81 T 14-10-2018 IPR009403 Protein of unknown function UPF0637 DB29_01205 0136662a59be0177cdd4f1ca20ea858b 383 Pfam PF06224 Winged helix DNA-binding domain 30 370 2.6E-76 T 14-10-2018 IPR009351 Protein of unknown function DUF1006 DB29_0P0027 f47fdee39d8e33c473a2db89ffadd51e 185 Pfam PF13411 MerR HTH family regulatory protein 22 90 2.9E-13 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DB29_0P0027 f47fdee39d8e33c473a2db89ffadd51e 185 Gene3D G3DSA:1.10.1660.10 19 178 3.4E-17 T 14-10-2018 DB29_0P0027 f47fdee39d8e33c473a2db89ffadd51e 185 SMART SM00422 21 92 0.0015 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DB29_0P0027 f47fdee39d8e33c473a2db89ffadd51e 185 SUPERFAMILY SSF46955 21 137 1.03E-13 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily DB29_03352 9a4e876025e91a88bec1dbe38fa2f533 309 Gene3D G3DSA:3.20.20.70 15 269 4.8E-24 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DB29_03352 9a4e876025e91a88bec1dbe38fa2f533 309 SMART SM00729 60 268 3.2E-20 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 DB29_03352 9a4e876025e91a88bec1dbe38fa2f533 309 TIGRFAM TIGR00510 lipA: lipoyl synthase 5 292 1.1E-123 T 14-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 DB29_03352 9a4e876025e91a88bec1dbe38fa2f533 309 Pfam PF04055 Radical SAM superfamily 67 227 7.7E-15 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 DB29_03352 9a4e876025e91a88bec1dbe38fa2f533 309 SUPERFAMILY SSF102114 23 291 4.19E-66 T 14-10-2018 DB29_03352 9a4e876025e91a88bec1dbe38fa2f533 309 PIRSF PIRSF005963 1 309 1.5E-140 T 14-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 DB29_03352 9a4e876025e91a88bec1dbe38fa2f533 309 Hamap MF_00206 Lipoyl synthase [lipA]. 1 298 150.077 T 14-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 DB29_03352 9a4e876025e91a88bec1dbe38fa2f533 309 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 5 48 2.5E-11 T 14-10-2018 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 DB29_03000 1635045ce37821ec381c5636ed25e73d 363 SUPERFAMILY SSF51735 20 172 2.85E-20 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_03000 1635045ce37821ec381c5636ed25e73d 363 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 158 240 1.4E-8 T 14-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 DB29_03000 1635045ce37821ec381c5636ed25e73d 363 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 47 143 2.0E-7 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 DB29_03000 1635045ce37821ec381c5636ed25e73d 363 Gene3D G3DSA:3.30.360.10 143 333 2.2E-122 T 14-10-2018 DB29_03000 1635045ce37821ec381c5636ed25e73d 363 SUPERFAMILY SSF55347 155 327 8.34E-24 T 14-10-2018 DB29_03000 1635045ce37821ec381c5636ed25e73d 363 Gene3D G3DSA:3.40.50.720 25 332 2.2E-122 T 14-10-2018 DB29_00006 8aed69c105634634b90531fa97e4afd3 126 Pfam PF17280 Family of unknown function (DUF5345) 34 109 7.2E-24 T 14-10-2018 IPR035238 Protein of unknown function DUF5345 DB29_00006 8aed69c105634634b90531fa97e4afd3 126 ProDom PD070249 YXLC MEMBRANE TRANSMEMBRANE 34 111 5.0E-39 T 14-10-2018 IPR035238 Protein of unknown function DUF5345 DB29_02493 c55643fbbb2da517720b35591691ee83 277 Gene3D G3DSA:3.10.180.10 2 163 6.1E-50 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DB29_02493 c55643fbbb2da517720b35591691ee83 277 Pfam PF13468 Glyoxalase-like domain 5 198 1.2E-39 T 14-10-2018 IPR025870 Glyoxalase-like domain DB29_02493 c55643fbbb2da517720b35591691ee83 277 SUPERFAMILY SSF54593 3 244 7.62E-12 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DB29_01598 a6fb9cba492205efad219bb4098b7250 361 Pfam PF02378 Phosphotransferase system, EIIC 15 266 1.9E-8 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 DB29_01598 a6fb9cba492205efad219bb4098b7250 361 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 7 331 3.3E-85 T 14-10-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 DB29_02187 81cb95529746b115ff6a43c033cc8cb3 117 Pfam PF05495 CHY zinc finger 28 100 4.3E-12 T 14-10-2018 IPR008913 Zinc finger, CHY-type GO:0008270 Reactome: R-HSA-110320|Reactome: R-HSA-983168 DB29_02187 81cb95529746b115ff6a43c033cc8cb3 117 SUPERFAMILY SSF161219 18 103 2.22E-18 T 14-10-2018 IPR037274 Zinc finger, CHY-type superfamily GO:0008270 Reactome: R-HSA-110320|Reactome: R-HSA-983168 DB29_02187 81cb95529746b115ff6a43c033cc8cb3 117 PIRSF PIRSF017292 12 117 2.9E-35 T 14-10-2018 IPR016694 Protein of unknown function UCP017292, zinc finger, CHY-type DB29_00955 783ce5ef79033736fcc74d45cfb2673b 201 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 1 189 2.2E-73 T 14-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 DB29_00955 783ce5ef79033736fcc74d45cfb2673b 201 SUPERFAMILY SSF56042 24 195 7.03E-63 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily DB29_00955 783ce5ef79033736fcc74d45cfb2673b 201 Pfam PF02769 AIR synthase related protein, C-terminal domain 29 195 4.7E-41 T 14-10-2018 IPR010918 PurM-like, C-terminal domain DB29_00955 783ce5ef79033736fcc74d45cfb2673b 201 Gene3D G3DSA:3.90.650.10 24 200 1.7E-71 T 14-10-2018 IPR036676 PurM-like, C-terminal domain superfamily DB29_00964 e2adb899d346d9859f18fe84c2c21bce 163 Gene3D G3DSA:3.40.50.7700 1 160 6.3E-75 T 14-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 DB29_00964 e2adb899d346d9859f18fe84c2c21bce 163 SMART SM01001 4 155 1.0E-106 T 14-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 DB29_00964 e2adb899d346d9859f18fe84c2c21bce 163 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 6 161 7.5E-69 T 14-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 DB29_00964 e2adb899d346d9859f18fe84c2c21bce 163 SUPERFAMILY SSF52255 5 160 3.01E-69 T 14-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 DB29_00964 e2adb899d346d9859f18fe84c2c21bce 163 Pfam PF00731 AIR carboxylase 6 152 2.0E-67 T 14-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 DB29_00964 e2adb899d346d9859f18fe84c2c21bce 163 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 6 159 34.479 T 14-10-2018 IPR033747 Class I PurE DB29_00964 e2adb899d346d9859f18fe84c2c21bce 163 PIRSF PIRSF001338 1 163 4.4E-71 T 14-10-2018 IPR024694 PurE, prokaryotic type GO:0006189 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234 DB29_03697 927e9cf25a46282d35399474156de7bb 344 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 1 344 3.2E-138 T 14-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 DB29_03697 927e9cf25a46282d35399474156de7bb 344 Gene3D G3DSA:3.30.360.10 147 312 9.4E-128 T 14-10-2018 DB29_03697 927e9cf25a46282d35399474156de7bb 344 SUPERFAMILY SSF51735 2 178 6.61E-47 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_03697 927e9cf25a46282d35399474156de7bb 344 SMART SM00859 2 141 1.1E-45 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 DB29_03697 927e9cf25a46282d35399474156de7bb 344 SUPERFAMILY SSF55347 149 312 6.98E-55 T 14-10-2018 DB29_03697 927e9cf25a46282d35399474156de7bb 344 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 3 141 2.3E-32 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 DB29_03697 927e9cf25a46282d35399474156de7bb 344 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 1 338 43.717 T 14-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 DB29_03697 927e9cf25a46282d35399474156de7bb 344 Gene3D G3DSA:3.40.50.720 3 330 9.4E-128 T 14-10-2018 DB29_03697 927e9cf25a46282d35399474156de7bb 344 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 158 315 1.3E-22 T 14-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 DB29_03697 927e9cf25a46282d35399474156de7bb 344 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 144 160 - T 14-10-2018 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 DB29_01554 912c88f07b4f45700cd51a313d208827 193 Pfam PF06725 3D domain 133 192 1.1E-19 T 14-10-2018 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 DB29_01554 912c88f07b4f45700cd51a313d208827 193 SUPERFAMILY SSF54106 22 67 6.02E-10 T 14-10-2018 DB29_01554 912c88f07b4f45700cd51a313d208827 193 SUPERFAMILY SSF50685 134 180 6.28E-8 T 14-10-2018 IPR036908 RlpA-like domain superfamily DB29_01554 912c88f07b4f45700cd51a313d208827 193 SMART SM00257 22 67 6.2E-14 T 14-10-2018 IPR018392 LysM domain DB29_01554 912c88f07b4f45700cd51a313d208827 193 Gene3D G3DSA:3.10.350.10 14 83 1.0E-17 T 14-10-2018 IPR036779 LysM domain superfamily DB29_01554 912c88f07b4f45700cd51a313d208827 193 Pfam PF01476 LysM domain 23 67 7.5E-14 T 14-10-2018 IPR018392 LysM domain DB29_01651 03add952c64545a46698d0275d981f8f 303 Gene3D G3DSA:1.10.10.10 11 94 5.3E-12 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_01651 03add952c64545a46698d0275d981f8f 303 PIRSF PIRSF030050 1 303 9.6E-145 T 14-10-2018 IPR016943 Uncharacterised conserved protein UCP030050, HTH transcriptional regulator, BH1869 DB29_01651 03add952c64545a46698d0275d981f8f 303 Pfam PF12840 Helix-turn-helix domain 16 69 7.2E-8 T 14-10-2018 DB29_01651 03add952c64545a46698d0275d981f8f 303 SUPERFAMILY SSF46785 10 233 3.45E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_03255 97c1a02633117bef00ff3132386b1d54 61 Pfam PF00892 EamA-like transporter family 2 51 1.9E-6 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DB29_03255 97c1a02633117bef00ff3132386b1d54 61 SUPERFAMILY SSF103481 3 54 1.22E-7 T 14-10-2018 DB29_00973 80f3ff67d3aeadad5b74af48eb683664 336 PIRSF PIRSF017082 3 336 9.8E-104 T 14-10-2018 IPR005064 Bordetella uptake gene GO:0030288 DB29_00973 80f3ff67d3aeadad5b74af48eb683664 336 Gene3D G3DSA:3.40.190.150 38 326 7.2E-70 T 14-10-2018 DB29_00973 80f3ff67d3aeadad5b74af48eb683664 336 Gene3D G3DSA:3.40.190.10 134 261 7.2E-70 T 14-10-2018 DB29_00973 80f3ff67d3aeadad5b74af48eb683664 336 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 58 332 3.7E-26 T 14-10-2018 IPR005064 Bordetella uptake gene GO:0030288 DB29_00973 80f3ff67d3aeadad5b74af48eb683664 336 SUPERFAMILY SSF53850 50 280 2.33E-11 T 14-10-2018 DB29_02942 efc350c2b12b83002d32a5bb3be8dec2 277 SUPERFAMILY SSF63520 57 165 6.41E-23 T 14-10-2018 IPR036634 PRD domain superfamily GO:0006355 DB29_02942 efc350c2b12b83002d32a5bb3be8dec2 277 Pfam PF00874 PRD domain 181 272 4.2E-18 T 14-10-2018 IPR011608 PRD domain GO:0006355 DB29_02942 efc350c2b12b83002d32a5bb3be8dec2 277 Pfam PF00874 PRD domain 76 162 2.1E-16 T 14-10-2018 IPR011608 PRD domain GO:0006355 DB29_02942 efc350c2b12b83002d32a5bb3be8dec2 277 Pfam PF03123 CAT RNA binding domain 1 54 1.4E-15 T 14-10-2018 IPR004341 CAT RNA-binding domain GO:0003723 DB29_02942 efc350c2b12b83002d32a5bb3be8dec2 277 SMART SM01061 1 62 9.6E-17 T 14-10-2018 IPR004341 CAT RNA-binding domain GO:0003723 DB29_02942 efc350c2b12b83002d32a5bb3be8dec2 277 SUPERFAMILY SSF50151 1 52 2.22E-12 T 14-10-2018 IPR036650 CAT RNA-binding domain superfamily GO:0003723 DB29_02942 efc350c2b12b83002d32a5bb3be8dec2 277 Gene3D G3DSA:2.30.24.10 1 54 8.0E-15 T 14-10-2018 IPR036650 CAT RNA-binding domain superfamily GO:0003723 DB29_02942 efc350c2b12b83002d32a5bb3be8dec2 277 Gene3D G3DSA:1.10.1790.10 168 277 7.0E-33 T 14-10-2018 DB29_02942 efc350c2b12b83002d32a5bb3be8dec2 277 SUPERFAMILY SSF63520 171 275 3.79E-24 T 14-10-2018 IPR036634 PRD domain superfamily GO:0006355 DB29_02942 efc350c2b12b83002d32a5bb3be8dec2 277 Gene3D G3DSA:1.10.1790.10 63 165 1.5E-24 T 14-10-2018 DB29_03759 8784ed911ba28539d3932ccfe6866698 80 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 16 68 9.0E-25 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor DB29_03759 8784ed911ba28539d3932ccfe6866698 80 SMART SM01234 1 68 2.5E-50 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor DB29_03759 8784ed911ba28539d3932ccfe6866698 80 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 5 76 8.4E-37 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor DB29_03759 8784ed911ba28539d3932ccfe6866698 80 Pfam PF01809 Haemolytic domain 2 68 2.1E-32 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor DB29_03759 8784ed911ba28539d3932ccfe6866698 80 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 1 69 26.282 T 14-10-2018 IPR002696 Putative membrane protein insertion efficiency factor DB29_02103 9a3c65843d2783b73320d6cde4306a8b 364 Gene3D G3DSA:3.40.50.10490 189 340 2.1E-49 T 14-10-2018 DB29_02103 9a3c65843d2783b73320d6cde4306a8b 364 SUPERFAMILY SSF53697 12 353 1.3E-57 T 14-10-2018 DB29_02103 9a3c65843d2783b73320d6cde4306a8b 364 Gene3D G3DSA:3.40.50.10490 2 187 7.1E-40 T 14-10-2018 DB29_02103 9a3c65843d2783b73320d6cde4306a8b 364 Pfam PF01380 SIS domain 213 285 4.2E-8 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 DB29_02103 9a3c65843d2783b73320d6cde4306a8b 364 Pfam PF01380 SIS domain 44 165 1.1E-15 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 DB29_04320 3cf4e55415635b69e53323b7cd903e65 136 SUPERFAMILY SSF52833 2 129 2.42E-18 T 14-10-2018 IPR036249 Thioredoxin-like superfamily DB29_04320 3cf4e55415635b69e53323b7cd903e65 136 Pfam PF13905 Thioredoxin-like 22 112 9.2E-9 T 14-10-2018 IPR012336 Thioredoxin-like fold DB29_04320 3cf4e55415635b69e53323b7cd903e65 136 Gene3D G3DSA:3.40.30.10 1 133 3.1E-19 T 14-10-2018 DB29_02756 62de9f2af70c8f96f47c22b82ae76f89 183 TIGRFAM TIGR01382 PfpI: intracellular protease, PfpI family 3 181 9.3E-44 T 14-10-2018 IPR006286 Deglycase PfpI DB29_02756 62de9f2af70c8f96f47c22b82ae76f89 183 SUPERFAMILY SSF52317 2 181 2.37E-44 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like DB29_02756 62de9f2af70c8f96f47c22b82ae76f89 183 Pfam PF01965 DJ-1/PfpI family 3 180 1.3E-37 T 14-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 DB29_02756 62de9f2af70c8f96f47c22b82ae76f89 183 Gene3D G3DSA:3.40.50.880 1 183 8.5E-42 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like DB29_00395 d68956cd30072749ea09c8b79b23a0c7 309 Gene3D G3DSA:1.20.1530.20 1 299 2.3E-51 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily DB29_00395 d68956cd30072749ea09c8b79b23a0c7 309 Pfam PF01758 Sodium Bile acid symporter family 29 201 1.1E-14 T 14-10-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 DB29_02325 95219bb1c6254c55e4400427d0d96b3c 356 Gene3D G3DSA:1.20.58.410 3 94 6.1E-7 T 14-10-2018 DB29_02325 95219bb1c6254c55e4400427d0d96b3c 356 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 2 354 9.0E-166 T 14-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 DB29_02325 95219bb1c6254c55e4400427d0d96b3c 356 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 1 355 39.795 T 14-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 DB29_02325 95219bb1c6254c55e4400427d0d96b3c 356 SUPERFAMILY SSF75620 8 351 7.85E-132 T 14-10-2018 DB29_02325 95219bb1c6254c55e4400427d0d96b3c 356 Gene3D G3DSA:3.30.160.20 209 295 6.6E-95 T 14-10-2018 DB29_02325 95219bb1c6254c55e4400427d0d96b3c 356 Pfam PF00472 RF-1 domain 210 319 4.9E-39 T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 DB29_02325 95219bb1c6254c55e4400427d0d96b3c 356 Pfam PF03462 PCRF domain 9 202 2.3E-73 T 14-10-2018 IPR005139 Peptide chain release factor GO:0006415 DB29_02325 95219bb1c6254c55e4400427d0d96b3c 356 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 226 242 - T 14-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 DB29_02325 95219bb1c6254c55e4400427d0d96b3c 356 SMART SM00937 63 177 8.3E-63 T 14-10-2018 IPR005139 Peptide chain release factor GO:0006415 DB29_02325 95219bb1c6254c55e4400427d0d96b3c 356 Gene3D G3DSA:3.30.70.1660 110 340 6.6E-95 T 14-10-2018 DB29_01789 aed5f9f74bf50ea812f3aae10656dabc 284 Pfam PF00892 EamA-like transporter family 9 134 1.9E-24 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DB29_01789 aed5f9f74bf50ea812f3aae10656dabc 284 Pfam PF00892 EamA-like transporter family 145 279 6.8E-20 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DB29_01789 aed5f9f74bf50ea812f3aae10656dabc 284 SUPERFAMILY SSF103481 181 282 1.03E-15 T 14-10-2018 DB29_01789 aed5f9f74bf50ea812f3aae10656dabc 284 SUPERFAMILY SSF103481 37 138 2.88E-16 T 14-10-2018 DB29_03298 4d9dc8a485f0dc1133140d2299878e1b 76 Gene3D G3DSA:3.10.180.10 1 73 1.1E-7 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DB29_03298 4d9dc8a485f0dc1133140d2299878e1b 76 SUPERFAMILY SSF54593 3 74 3.1E-8 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DB29_00543 4b729930b5018d3d057e0a09cb0e77a3 289 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 181 209 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 DB29_00543 4b729930b5018d3d057e0a09cb0e77a3 289 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 122 133 2.0E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_00543 4b729930b5018d3d057e0a09cb0e77a3 289 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 194 213 2.0E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_00543 4b729930b5018d3d057e0a09cb0e77a3 289 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 174 182 2.0E-9 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_00543 4b729930b5018d3d057e0a09cb0e77a3 289 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 55 284 6.4E-59 T 14-10-2018 DB29_00543 4b729930b5018d3d057e0a09cb0e77a3 289 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 249 269 5.2E-37 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_00543 4b729930b5018d3d057e0a09cb0e77a3 289 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 184 5.2E-37 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_00543 4b729930b5018d3d057e0a09cb0e77a3 289 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 194 213 5.2E-37 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_00543 4b729930b5018d3d057e0a09cb0e77a3 289 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 47 64 5.2E-37 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_00543 4b729930b5018d3d057e0a09cb0e77a3 289 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 232 5.2E-37 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_00543 4b729930b5018d3d057e0a09cb0e77a3 289 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 122 133 5.2E-37 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_00543 4b729930b5018d3d057e0a09cb0e77a3 289 Gene3D G3DSA:3.40.50.720 3 287 8.8E-87 T 14-10-2018 DB29_00543 4b729930b5018d3d057e0a09cb0e77a3 289 SUPERFAMILY SSF51735 44 286 2.03E-79 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_04041 905832cb3896efe34ccbd8ba9bd83fb8 379 Gene3D G3DSA:3.40.50.720 1 147 4.9E-51 T 14-10-2018 DB29_04041 905832cb3896efe34ccbd8ba9bd83fb8 379 Pfam PF13288 DXP reductoisomerase C-terminal domain 258 375 2.0E-44 T 14-10-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 DB29_04041 905832cb3896efe34ccbd8ba9bd83fb8 379 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 143 226 1.4E-40 T 14-10-2018 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 DB29_04041 905832cb3896efe34ccbd8ba9bd83fb8 379 SUPERFAMILY SSF55347 123 261 5.89E-60 T 14-10-2018 DB29_04041 905832cb3896efe34ccbd8ba9bd83fb8 379 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 4 129 1.4E-43 T 14-10-2018 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 DB29_04041 905832cb3896efe34ccbd8ba9bd83fb8 379 Gene3D G3DSA:1.10.1740.10 300 379 5.7E-28 T 14-10-2018 DB29_04041 905832cb3896efe34ccbd8ba9bd83fb8 379 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1 376 2.8E-166 T 14-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 DB29_04041 905832cb3896efe34ccbd8ba9bd83fb8 379 PIRSF PIRSF006205 1 379 1.3E-161 T 14-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 DB29_04041 905832cb3896efe34ccbd8ba9bd83fb8 379 SUPERFAMILY SSF51735 2 147 1.79E-41 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_04041 905832cb3896efe34ccbd8ba9bd83fb8 379 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 4 379 46.154 T 14-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 DB29_04041 905832cb3896efe34ccbd8ba9bd83fb8 379 SUPERFAMILY SSF69055 289 377 3.27E-30 T 14-10-2018 IPR036169 DXP reductoisomerase, C-terminal domain superfamily KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 DB29_01420 a55a74cd163f7452cfdd796dc859d51c 336 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 42 321 1.9E-87 T 14-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 DB29_01420 a55a74cd163f7452cfdd796dc859d51c 336 Gene3D G3DSA:3.40.190.170 41 336 6.4E-99 T 14-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily DB29_01420 a55a74cd163f7452cfdd796dc859d51c 336 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 42 287 4.0E-71 T 14-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 DB29_01420 a55a74cd163f7452cfdd796dc859d51c 336 PIRSF PIRSF006470 7 334 9.6E-88 T 14-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 DB29_02885 38535a1b727b5f83d5c3ef25776b2061 101 SMART SM00418 18 96 8.8E-33 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DB29_02885 38535a1b727b5f83d5c3ef25776b2061 101 Gene3D G3DSA:1.10.10.10 2 101 1.7E-30 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_02885 38535a1b727b5f83d5c3ef25776b2061 101 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 39 50 2.9E-13 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DB29_02885 38535a1b727b5f83d5c3ef25776b2061 101 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 52 67 2.9E-13 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DB29_02885 38535a1b727b5f83d5c3ef25776b2061 101 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 20 35 2.9E-13 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DB29_02885 38535a1b727b5f83d5c3ef25776b2061 101 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 67 82 2.9E-13 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DB29_02885 38535a1b727b5f83d5c3ef25776b2061 101 SUPERFAMILY SSF46785 5 99 2.06E-26 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_02885 38535a1b727b5f83d5c3ef25776b2061 101 Pfam PF01022 Bacterial regulatory protein, arsR family 25 71 6.1E-17 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DB29_03966 7b63935a13d2b015ad036cb725b4b8c7 286 Pfam PF02645 Uncharacterised protein, DegV family COG1307 3 281 6.4E-93 T 14-10-2018 IPR003797 DegV DB29_03966 7b63935a13d2b015ad036cb725b4b8c7 286 SUPERFAMILY SSF82549 2 280 9.42E-88 T 14-10-2018 DB29_03966 7b63935a13d2b015ad036cb725b4b8c7 286 Gene3D G3DSA:3.40.50.10170 1 154 7.1E-54 T 14-10-2018 DB29_03966 7b63935a13d2b015ad036cb725b4b8c7 286 TIGRFAM TIGR00762 DegV: EDD domain protein, DegV family 4 279 7.0E-101 T 14-10-2018 IPR003797 DegV DB29_03966 7b63935a13d2b015ad036cb725b4b8c7 286 Gene3D G3DSA:3.30.1180.10 158 283 4.2E-40 T 14-10-2018 DB29_00846 d6904ddca018df26d3ad890fdfc15877 504 Gene3D G3DSA:3.40.190.10 158 502 9.7E-65 T 14-10-2018 DB29_00846 d6904ddca018df26d3ad890fdfc15877 504 Gene3D G3DSA:3.40.190.10 65 424 9.7E-65 T 14-10-2018 DB29_00846 d6904ddca018df26d3ad890fdfc15877 504 SUPERFAMILY SSF53850 22 503 7.97E-92 T 14-10-2018 DB29_00846 d6904ddca018df26d3ad890fdfc15877 504 Pfam PF01547 Bacterial extracellular solute-binding protein 62 341 1.1E-18 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein DB29_00734 44d9e00d904f3bd21b9c8c6a2d6ad142 266 SMART SM00382 27 223 1.8E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_00734 44d9e00d904f3bd21b9c8c6a2d6ad142 266 Pfam PF00005 ABC transporter 18 174 8.1E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB29_00734 44d9e00d904f3bd21b9c8c6a2d6ad142 266 Gene3D G3DSA:3.40.50.300 1 263 1.2E-64 T 14-10-2018 DB29_00734 44d9e00d904f3bd21b9c8c6a2d6ad142 266 TIGRFAM TIGR02315 ABC_phnC: phosphonate ABC transporter, ATP-binding protein 1 243 2.0E-110 T 14-10-2018 IPR012693 ABC transporter, phosphonate import, PhnC GO:0005524|GO:0015416|GO:0015716|GO:0016020 DB29_00734 44d9e00d904f3bd21b9c8c6a2d6ad142 266 SUPERFAMILY SSF52540 1 236 2.13E-63 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_00734 44d9e00d904f3bd21b9c8c6a2d6ad142 266 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB29_03939 5d47b0afe2431d03f0f3a298ca51bcdc 361 SUPERFAMILY SSF52021 1 141 1.12E-56 T 14-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DB29_03939 5d47b0afe2431d03f0f3a298ca51bcdc 361 PRINTS PR00096 Glutamine amidotransferase superfamily signature 241 252 1.6E-12 T 14-10-2018 DB29_03939 5d47b0afe2431d03f0f3a298ca51bcdc 361 PRINTS PR00096 Glutamine amidotransferase superfamily signature 327 340 1.6E-12 T 14-10-2018 DB29_03939 5d47b0afe2431d03f0f3a298ca51bcdc 361 PRINTS PR00096 Glutamine amidotransferase superfamily signature 214 223 1.6E-12 T 14-10-2018 DB29_03939 5d47b0afe2431d03f0f3a298ca51bcdc 361 Gene3D G3DSA:3.50.30.20 1 144 1.6E-58 T 14-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DB29_03939 5d47b0afe2431d03f0f3a298ca51bcdc 361 Gene3D G3DSA:3.40.50.880 145 356 2.3E-63 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like DB29_03939 5d47b0afe2431d03f0f3a298ca51bcdc 361 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 283 294 8.1E-36 T 14-10-2018 DB29_03939 5d47b0afe2431d03f0f3a298ca51bcdc 361 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 172 186 8.1E-36 T 14-10-2018 DB29_03939 5d47b0afe2431d03f0f3a298ca51bcdc 361 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 211 225 8.1E-36 T 14-10-2018 DB29_03939 5d47b0afe2431d03f0f3a298ca51bcdc 361 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 241 257 8.1E-36 T 14-10-2018 DB29_03939 5d47b0afe2431d03f0f3a298ca51bcdc 361 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 258 275 8.1E-36 T 14-10-2018 DB29_03939 5d47b0afe2431d03f0f3a298ca51bcdc 361 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 1 356 47.097 T 14-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DB29_03939 5d47b0afe2431d03f0f3a298ca51bcdc 361 SMART SM01097 1 131 2.6E-88 T 14-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DB29_03939 5d47b0afe2431d03f0f3a298ca51bcdc 361 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 3 130 1.0E-53 T 14-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DB29_03939 5d47b0afe2431d03f0f3a298ca51bcdc 361 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 4 353 1.2E-146 T 14-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DB29_03939 5d47b0afe2431d03f0f3a298ca51bcdc 361 SUPERFAMILY SSF52317 150 355 3.67E-57 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like DB29_03939 5d47b0afe2431d03f0f3a298ca51bcdc 361 Pfam PF00117 Glutamine amidotransferase class-I 174 350 3.7E-45 T 14-10-2018 IPR017926 Glutamine amidotransferase DB29_03939 5d47b0afe2431d03f0f3a298ca51bcdc 361 PRINTS PR00097 Anthranilate synthase component II signature 214 223 3.1E-7 T 14-10-2018 DB29_03939 5d47b0afe2431d03f0f3a298ca51bcdc 361 PRINTS PR00097 Anthranilate synthase component II signature 241 252 3.1E-7 T 14-10-2018 DB29_03939 5d47b0afe2431d03f0f3a298ca51bcdc 361 PRINTS PR00097 Anthranilate synthase component II signature 327 340 3.1E-7 T 14-10-2018 DB29_03149 ac5bcc71154bd302a8bae2ce5d0e7ecd 370 Gene3D G3DSA:3.30.450.40 1 176 5.4E-24 T 14-10-2018 IPR029016 GAF-like domain superfamily DB29_03149 ac5bcc71154bd302a8bae2ce5d0e7ecd 370 Gene3D G3DSA:3.30.565.10 238 368 3.2E-23 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB29_03149 ac5bcc71154bd302a8bae2ce5d0e7ecd 370 Pfam PF13185 GAF domain 18 160 6.2E-16 T 14-10-2018 IPR003018 GAF domain GO:0005515 DB29_03149 ac5bcc71154bd302a8bae2ce5d0e7ecd 370 SUPERFAMILY SSF55874 244 363 3.8E-15 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB29_03149 ac5bcc71154bd302a8bae2ce5d0e7ecd 370 SMART SM00065 19 170 1.2E-6 T 14-10-2018 IPR003018 GAF domain GO:0005515 DB29_03149 ac5bcc71154bd302a8bae2ce5d0e7ecd 370 SUPERFAMILY SSF55781 20 165 1.92E-20 T 14-10-2018 DB29_03149 ac5bcc71154bd302a8bae2ce5d0e7ecd 370 Pfam PF07730 Histidine kinase 177 236 6.4E-14 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 DB29_04278 92e7f5a7be9101d8eb46782e41dbea6c 466 Pfam PF00367 phosphotransferase system, EIIB 393 426 3.5E-13 T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 DB29_04278 92e7f5a7be9101d8eb46782e41dbea6c 466 SUPERFAMILY SSF55604 391 465 1.31E-19 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 DB29_04278 92e7f5a7be9101d8eb46782e41dbea6c 466 Pfam PF02378 Phosphotransferase system, EIIC 10 298 8.2E-54 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 DB29_04278 92e7f5a7be9101d8eb46782e41dbea6c 466 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 404 421 - T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 DB29_04278 92e7f5a7be9101d8eb46782e41dbea6c 466 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 363 451 1.5E-15 T 14-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 DB29_04278 92e7f5a7be9101d8eb46782e41dbea6c 466 Gene3D G3DSA:3.30.1360.60 387 466 3.5E-23 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 DB29_01959 4fdcd252822eb9a414c8c4a6f3980e91 165 Pfam PF00583 Acetyltransferase (GNAT) family 46 139 2.1E-15 T 14-10-2018 IPR000182 GNAT domain DB29_01959 4fdcd252822eb9a414c8c4a6f3980e91 165 SUPERFAMILY SSF55729 1 165 1.6E-33 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase DB29_01959 4fdcd252822eb9a414c8c4a6f3980e91 165 Gene3D G3DSA:3.40.630.30 1 165 1.5E-39 T 14-10-2018 DB29_02861 bd684f5b6c4f4d2c5ee733f2908d113a 268 Pfam PF02602 Uroporphyrinogen-III synthase HemD 19 259 3.3E-32 T 14-10-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 DB29_02861 bd684f5b6c4f4d2c5ee733f2908d113a 268 Gene3D G3DSA:3.40.50.10090 37 173 7.8E-69 T 14-10-2018 DB29_02861 bd684f5b6c4f4d2c5ee733f2908d113a 268 SUPERFAMILY SSF69618 6 266 1.31E-49 T 14-10-2018 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 DB29_02861 bd684f5b6c4f4d2c5ee733f2908d113a 268 Gene3D G3DSA:3.40.50.10090 10 258 7.8E-69 T 14-10-2018 DB29_00127 cfc29b582250f73492596d3cec5d6437 200 Pfam PF05389 Negative regulator of genetic competence (MecA) 1 87 3.1E-21 T 14-10-2018 IPR008681 Negative regulator of genetic competence, MecA DB29_00127 cfc29b582250f73492596d3cec5d6437 200 Pfam PF05389 Negative regulator of genetic competence (MecA) 102 192 5.7E-12 T 14-10-2018 IPR008681 Negative regulator of genetic competence, MecA DB29_00127 cfc29b582250f73492596d3cec5d6437 200 Hamap MF_01124 Adapter protein MecA [mecA]. 1 196 22.132 T 14-10-2018 IPR008681 Negative regulator of genetic competence, MecA DB29_00127 cfc29b582250f73492596d3cec5d6437 200 PIRSF PIRSF029008 1 198 4.9E-59 T 14-10-2018 IPR008681 Negative regulator of genetic competence, MecA DB29_00127 cfc29b582250f73492596d3cec5d6437 200 Gene3D G3DSA:3.30.70.1950 105 197 8.8E-23 T 14-10-2018 IPR038471 MecA, C-terminal domain superfamily DB29_01755 0530bb53093a5d02ee19872b180307e5 296 ProSitePatterns PS01272 Glucokinase regulatory protein family signature. 184 201 - T 14-10-2018 IPR005486 Glucokinase regulatory protein, conserved site KEGG: 00520+4.2.1.126|Reactome: R-HSA-170822|Reactome: R-HSA-5619107 DB29_01755 0530bb53093a5d02ee19872b180307e5 296 TIGRFAM TIGR00274 TIGR00274: N-acetylmuramic acid 6-phosphate etherase 5 294 1.4E-113 T 14-10-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 DB29_01755 0530bb53093a5d02ee19872b180307e5 296 Hamap MF_00068 N-acetylmuramic acid 6-phosphate etherase [murQ]. 1 294 41.298 T 14-10-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 DB29_01755 0530bb53093a5d02ee19872b180307e5 296 Gene3D G3DSA:3.40.50.10490 2 217 4.0E-71 T 14-10-2018 DB29_01755 0530bb53093a5d02ee19872b180307e5 296 SUPERFAMILY SSF53697 4 246 1.42E-68 T 14-10-2018 DB29_01755 0530bb53093a5d02ee19872b180307e5 296 Gene3D G3DSA:1.10.8.1080 218 296 3.0E-29 T 14-10-2018 DB29_01755 0530bb53093a5d02ee19872b180307e5 296 Pfam PF01380 SIS domain 126 203 6.4E-10 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 DB29_00659 35a459ed5dd7a14b6c31b092d7f23f90 121 Pfam PF11023 Zinc-ribbon containing domain 4 113 1.4E-60 T 14-10-2018 IPR020912 Uncharacterised protein family UPF0295 GO:0005887 DB29_00659 35a459ed5dd7a14b6c31b092d7f23f90 121 Hamap MF_01502 UPF0295 protein . 2 116 37.405 T 14-10-2018 IPR020912 Uncharacterised protein family UPF0295 GO:0005887 DB29_00659 35a459ed5dd7a14b6c31b092d7f23f90 121 ProDom PD355753 MEMBRANE TRANSMEMBRANE UPF0295 BLI00901/BL05075 BT9727_0449 GK0479 BCE0593 YGZB PRECURSOR BA0538/GBAA0538/BAS0506 4 112 1.0E-59 T 14-10-2018 IPR020912 Uncharacterised protein family UPF0295 GO:0005887 DB29_03473 34286de8368d5575f68f2a0b5cdbdb17 357 SUPERFAMILY SSF101821 71 180 6.11E-32 T 14-10-2018 DB29_03473 34286de8368d5575f68f2a0b5cdbdb17 357 Pfam PF05343 M42 glutamyl aminopeptidase 46 337 1.6E-107 T 14-10-2018 IPR008007 Peptidase M42 DB29_03473 34286de8368d5575f68f2a0b5cdbdb17 357 Gene3D G3DSA:3.40.630.10 11 340 1.3E-115 T 14-10-2018 DB29_03473 34286de8368d5575f68f2a0b5cdbdb17 357 Gene3D G3DSA:2.40.30.40 75 162 1.3E-115 T 14-10-2018 IPR023367 Peptidase M42, domain 2 DB29_03473 34286de8368d5575f68f2a0b5cdbdb17 357 PIRSF PIRSF001123 2 356 2.4E-144 T 14-10-2018 IPR008007 Peptidase M42 DB29_03473 34286de8368d5575f68f2a0b5cdbdb17 357 SUPERFAMILY SSF53187 6 352 7.26E-70 T 14-10-2018 DB29_00750 f1a70138d615039353487026c1262508 415 Pfam PF04143 Sulphur transport 67 395 2.4E-75 T 14-10-2018 IPR007272 Sulphur transport domain DB29_03006 264ac12b2f3f17f11ebb6e8c16288b73 441 Pfam PF01547 Bacterial extracellular solute-binding protein 59 352 5.9E-26 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein DB29_03006 264ac12b2f3f17f11ebb6e8c16288b73 441 Gene3D G3DSA:3.40.190.10 28 436 1.1E-55 T 14-10-2018 DB29_03006 264ac12b2f3f17f11ebb6e8c16288b73 441 SUPERFAMILY SSF53850 59 433 4.74E-49 T 14-10-2018 DB29_00342 8ea3969d8f9ca8d5bfb621c1c37ae512 417 SUPERFAMILY SSF118215 12 404 4.84E-86 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 DB29_00342 8ea3969d8f9ca8d5bfb621c1c37ae512 417 Gene3D G3DSA:1.10.3860.10 1 408 5.1E-84 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 DB29_00342 8ea3969d8f9ca8d5bfb621c1c37ae512 417 Pfam PF00375 Sodium:dicarboxylate symporter family 14 404 5.1E-98 T 14-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 DB29_00342 8ea3969d8f9ca8d5bfb621c1c37ae512 417 PRINTS PR00173 Glutamate-aspartate symporter signature 9 29 1.0E-14 T 14-10-2018 DB29_00342 8ea3969d8f9ca8d5bfb621c1c37ae512 417 PRINTS PR00173 Glutamate-aspartate symporter signature 359 379 1.0E-14 T 14-10-2018 DB29_00342 8ea3969d8f9ca8d5bfb621c1c37ae512 417 PRINTS PR00173 Glutamate-aspartate symporter signature 194 213 1.0E-14 T 14-10-2018 DB29_00342 8ea3969d8f9ca8d5bfb621c1c37ae512 417 PRINTS PR00173 Glutamate-aspartate symporter signature 296 322 1.0E-14 T 14-10-2018 DB29_00342 8ea3969d8f9ca8d5bfb621c1c37ae512 417 PRINTS PR00173 Glutamate-aspartate symporter signature 147 169 1.0E-14 T 14-10-2018 DB29_01392 e8135db02cf419c66e20733ebac209f8 395 SUPERFAMILY SSF103473 6 378 2.62E-57 T 14-10-2018 IPR036259 MFS transporter superfamily DB29_01392 e8135db02cf419c66e20733ebac209f8 395 Gene3D G3DSA:1.20.1250.20 3 389 1.4E-45 T 14-10-2018 DB29_01392 e8135db02cf419c66e20733ebac209f8 395 Pfam PF07690 Major Facilitator Superfamily 11 344 1.4E-43 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DB29_01392 e8135db02cf419c66e20733ebac209f8 395 PRINTS PR01035 Tetracycline resistance protein signature 267 288 8.8E-5 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 DB29_01392 e8135db02cf419c66e20733ebac209f8 395 PRINTS PR01035 Tetracycline resistance protein signature 43 62 8.8E-5 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 DB29_01392 e8135db02cf419c66e20733ebac209f8 395 PRINTS PR01035 Tetracycline resistance protein signature 161 181 8.8E-5 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 DB29_00473 094c3c48d178227d1cc76d62403e8dd0 317 Pfam PF00266 Aminotransferase class-V 6 305 1.6E-45 T 14-10-2018 IPR000192 Aminotransferase class V domain DB29_00473 094c3c48d178227d1cc76d62403e8dd0 317 Gene3D G3DSA:3.90.1150.10 199 314 9.9E-90 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DB29_00473 094c3c48d178227d1cc76d62403e8dd0 317 Gene3D G3DSA:3.40.640.10 2 198 9.9E-90 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DB29_00473 094c3c48d178227d1cc76d62403e8dd0 317 SUPERFAMILY SSF53383 4 314 1.51E-70 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DB29_00473 094c3c48d178227d1cc76d62403e8dd0 317 PIRSF PIRSF005572 1 317 7.4E-84 T 14-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 DB29_00473 094c3c48d178227d1cc76d62403e8dd0 317 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 135 154 - T 14-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site DB29_01093 e919cbce14a92265580700f91e57015a 863 Pfam PF09586 Bacterial membrane protein YfhO 15 845 1.4E-195 T 14-10-2018 IPR018580 Uncharacterised protein family YfhO DB29_00637 f172d560c71969887700b06da138c7c9 111 SUPERFAMILY SSF54909 2 97 2.24E-12 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel DB29_00637 f172d560c71969887700b06da138c7c9 111 Pfam PF03992 Antibiotic biosynthesis monooxygenase 6 61 4.5E-7 T 14-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain DB29_00637 f172d560c71969887700b06da138c7c9 111 Gene3D G3DSA:3.30.70.100 1 100 3.4E-9 T 14-10-2018 DB29_03663 49b40950cfce5a00ce3e92148fd60534 306 Gene3D G3DSA:3.40.190.10 50 287 2.0E-78 T 14-10-2018 DB29_03663 49b40950cfce5a00ce3e92148fd60534 306 Pfam PF12849 PBP superfamily domain 38 273 3.7E-34 T 14-10-2018 IPR024370 PBP domain DB29_03663 49b40950cfce5a00ce3e92148fd60534 306 TIGRFAM TIGR02136 ptsS_2: phosphate binding protein 1 289 4.1E-72 T 14-10-2018 IPR011862 Phosphate binding protein GO:0042301 DB29_03663 49b40950cfce5a00ce3e92148fd60534 306 SUPERFAMILY SSF53850 48 302 1.21E-65 T 14-10-2018 DB29_03663 49b40950cfce5a00ce3e92148fd60534 306 Gene3D G3DSA:3.40.190.10 122 246 2.0E-78 T 14-10-2018 DB29_00081 d2ee8b60acfd4715eadfc3cb1d65b4f5 430 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 13 430 32.787 T 14-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 DB29_00081 d2ee8b60acfd4715eadfc3cb1d65b4f5 430 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 17 429 4.4E-127 T 14-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 DB29_00081 d2ee8b60acfd4715eadfc3cb1d65b4f5 430 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 12 426 1.0E-125 T 14-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 DB29_00081 d2ee8b60acfd4715eadfc3cb1d65b4f5 430 PIRSF PIRSF000505 4 430 8.8E-119 T 14-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 DB29_00081 d2ee8b60acfd4715eadfc3cb1d65b4f5 430 SUPERFAMILY SSF55205 12 429 4.09E-137 T 14-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 DB29_00081 d2ee8b60acfd4715eadfc3cb1d65b4f5 430 ProSitePatterns PS00104 EPSP synthase signature 1. 91 105 - T 14-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 DB29_00081 d2ee8b60acfd4715eadfc3cb1d65b4f5 430 Gene3D G3DSA:3.65.10.10 25 233 7.2E-160 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 DB29_00081 d2ee8b60acfd4715eadfc3cb1d65b4f5 430 Gene3D G3DSA:3.65.10.10 15 426 7.2E-160 T 14-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 DB29_00081 d2ee8b60acfd4715eadfc3cb1d65b4f5 430 ProSitePatterns PS00885 EPSP synthase signature 2. 343 361 - T 14-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 DB29_04168 bffc0b06ae8f791ce637dbb142e7ceaf 43 SUPERFAMILY SSF100985 3 39 1.96E-9 T 14-10-2018 IPR036916 Sporulation inhibitor A superfamily DB29_04168 bffc0b06ae8f791ce637dbb142e7ceaf 43 Pfam PF08970 Sporulation inhibitor A 4 37 1.5E-10 T 14-10-2018 IPR015064 Sporulation inhibitor A DB29_04168 bffc0b06ae8f791ce637dbb142e7ceaf 43 Gene3D G3DSA:1.10.287.1100 5 38 1.7E-8 T 14-10-2018 IPR036916 Sporulation inhibitor A superfamily DB29_02121 a15d8750d0eee164284c8d926b6579fd 193 SUPERFAMILY SSF46689 6 73 3.99E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DB29_02121 a15d8750d0eee164284c8d926b6579fd 193 Gene3D G3DSA:1.10.357.10 4 184 5.6E-40 T 14-10-2018 DB29_02121 a15d8750d0eee164284c8d926b6579fd 193 Pfam PF14278 Transcriptional regulator C-terminal region 88 161 9.2E-16 T 14-10-2018 IPR039532 Transcriptional regulator TetR, C-terminal, Firmicutes type DB29_02780 8a3dfe8e269c0b6b2c700a76b2ea5dd9 273 SUPERFAMILY SSF53474 8 264 1.45E-55 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DB29_02780 8a3dfe8e269c0b6b2c700a76b2ea5dd9 273 Pfam PF00756 Putative esterase 27 234 3.0E-14 T 14-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 DB29_02780 8a3dfe8e269c0b6b2c700a76b2ea5dd9 273 Gene3D G3DSA:3.40.50.1820 16 264 5.9E-67 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DB29_00095 401f112d7e2becbfbedb0bd46c76bf2a 147 SMART SM00562 1 138 5.9E-93 T 14-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 DB29_00095 401f112d7e2becbfbedb0bd46c76bf2a 147 SUPERFAMILY SSF54919 1 146 5.5E-61 T 14-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 DB29_00095 401f112d7e2becbfbedb0bd46c76bf2a 147 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 112 120 - T 14-10-2018 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 DB29_00095 401f112d7e2becbfbedb0bd46c76bf2a 147 PRINTS PR01243 Nucleoside diphosphate kinase signature 89 105 3.1E-51 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 DB29_00095 401f112d7e2becbfbedb0bd46c76bf2a 147 PRINTS PR01243 Nucleoside diphosphate kinase signature 68 85 3.1E-51 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 DB29_00095 401f112d7e2becbfbedb0bd46c76bf2a 147 PRINTS PR01243 Nucleoside diphosphate kinase signature 112 131 3.1E-51 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 DB29_00095 401f112d7e2becbfbedb0bd46c76bf2a 147 PRINTS PR01243 Nucleoside diphosphate kinase signature 4 26 3.1E-51 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 DB29_00095 401f112d7e2becbfbedb0bd46c76bf2a 147 PRINTS PR01243 Nucleoside diphosphate kinase signature 48 67 3.1E-51 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 DB29_00095 401f112d7e2becbfbedb0bd46c76bf2a 147 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 1 136 37.695 T 14-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 DB29_00095 401f112d7e2becbfbedb0bd46c76bf2a 147 Gene3D G3DSA:3.30.70.141 1 147 2.4E-63 T 14-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 DB29_00095 401f112d7e2becbfbedb0bd46c76bf2a 147 Pfam PF00334 Nucleoside diphosphate kinase 2 135 9.1E-59 T 14-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 DB29_01294 f11b821140b565da3aa6c006ce839acc 1224 SMART SM00926 41 103 0.0019 T 14-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DB29_01294 f11b821140b565da3aa6c006ce839acc 1224 Pfam PF14710 Respiratory nitrate reductase alpha N-terminal 7 38 1.0E-10 T 14-10-2018 IPR028189 Nitrate reductase, alpha subunit, N-terminal KEGG: 00910+1.7.5.1|MetaCyc: PWY-6748 DB29_01294 f11b821140b565da3aa6c006ce839acc 1224 SUPERFAMILY SSF50692 1070 1222 7.46E-46 T 14-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily DB29_01294 f11b821140b565da3aa6c006ce839acc 1224 Gene3D G3DSA:3.40.50.12440 42 1224 0.0 T 14-10-2018 DB29_01294 f11b821140b565da3aa6c006ce839acc 1224 Pfam PF00384 Molybdopterin oxidoreductase 106 817 2.6E-156 T 14-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DB29_01294 f11b821140b565da3aa6c006ce839acc 1224 SUPERFAMILY SSF53706 9 1052 0.0 T 14-10-2018 DB29_01294 f11b821140b565da3aa6c006ce839acc 1224 Pfam PF01568 Molydopterin dinucleotide binding domain 1075 1186 1.1E-20 T 14-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 DB29_01294 f11b821140b565da3aa6c006ce839acc 1224 TIGRFAM TIGR01580 narG: nitrate reductase, alpha subunit 7 1223 0.0 T 14-10-2018 IPR006468 Nitrate reductase, alpha subunit GO:0008940|GO:0009325|GO:0042126|GO:0055114 KEGG: 00910+1.7.5.1|MetaCyc: PWY-6748 DB29_00997 13a80ea4a2150e6e83ebe67316ac24a9 224 Gene3D G3DSA:3.40.50.1580 1 215 1.1E-31 T 14-10-2018 DB29_00997 13a80ea4a2150e6e83ebe67316ac24a9 224 Pfam PF01048 Phosphorylase superfamily 33 211 4.5E-16 T 14-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 DB29_00997 13a80ea4a2150e6e83ebe67316ac24a9 224 Hamap MF_00991 Futalosine hydrolase [mqnB]. 20 211 22.566 T 14-10-2018 IPR019963 Futalosine hydrolase GO:0009234|GO:0016799 KEGG: 00130+3.2.2.26|MetaCyc: PWY-7374 DB29_00997 13a80ea4a2150e6e83ebe67316ac24a9 224 SUPERFAMILY SSF53167 7 194 4.71E-25 T 14-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 DB29_00997 13a80ea4a2150e6e83ebe67316ac24a9 224 TIGRFAM TIGR03664 fut_nucase: futalosine hydrolase 7 209 9.2E-64 T 14-10-2018 IPR019963 Futalosine hydrolase GO:0009234|GO:0016799 KEGG: 00130+3.2.2.26|MetaCyc: PWY-7374 DB29_00405 40f7c5d1ec004c8be339df423a486b84 203 Pfam PF00440 Bacterial regulatory proteins, tetR family 10 54 1.1E-18 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DB29_00405 40f7c5d1ec004c8be339df423a486b84 203 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 31 54 6.2E-12 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DB29_00405 40f7c5d1ec004c8be339df423a486b84 203 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 10 23 6.2E-12 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DB29_00405 40f7c5d1ec004c8be339df423a486b84 203 SUPERFAMILY SSF46689 5 69 8.98E-18 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DB29_00405 40f7c5d1ec004c8be339df423a486b84 203 Gene3D G3DSA:1.10.357.10 2 190 7.7E-38 T 14-10-2018 DB29_00405 40f7c5d1ec004c8be339df423a486b84 203 SUPERFAMILY SSF48498 87 176 4.13E-9 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily DB29_01707 18737c532102657dad5e6c8230d85cc9 340 Gene3D G3DSA:1.10.10.60 230 337 8.3E-22 T 14-10-2018 DB29_01707 18737c532102657dad5e6c8230d85cc9 340 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 23 205 9.5E-18 T 14-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal DB29_01707 18737c532102657dad5e6c8230d85cc9 340 Pfam PF12833 Helix-turn-helix domain 256 331 3.2E-18 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DB29_01707 18737c532102657dad5e6c8230d85cc9 340 SUPERFAMILY SSF46689 285 331 1.25E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DB29_01707 18737c532102657dad5e6c8230d85cc9 340 SMART SM00342 249 331 1.0E-17 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DB29_04076 141aa2b3d19d894dcc3061af6d4c4a3d 210 PIRSF PIRSF000847 17 210 6.6E-54 T 14-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 DB29_04076 141aa2b3d19d894dcc3061af6d4c4a3d 210 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 77 99 - T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 DB29_04076 141aa2b3d19d894dcc3061af6d4c4a3d 210 Pfam PF01066 CDP-alcohol phosphatidyltransferase 20 99 1.1E-16 T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 DB29_04076 141aa2b3d19d894dcc3061af6d4c4a3d 210 Gene3D G3DSA:1.20.120.1760 21 206 7.8E-10 T 14-10-2018 DB29_04076 141aa2b3d19d894dcc3061af6d4c4a3d 210 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 20 207 1.3E-60 T 14-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 DB29_04348 4ce50455afac1428203815148520039f 597 SUPERFAMILY SSF55486 6 577 9.0E-93 T 14-10-2018 DB29_04348 4ce50455afac1428203815148520039f 597 TIGRFAM TIGR00181 pepF: oligoendopeptidase F 6 595 8.2E-175 T 14-10-2018 IPR004438 Peptidase M3B, oligoendopeptidase F GO:0004222|GO:0006508 DB29_04348 4ce50455afac1428203815148520039f 597 Pfam PF08439 Oligopeptidase F 113 181 6.5E-17 T 14-10-2018 IPR013647 Oligopeptidase F, N-terminal domain DB29_04348 4ce50455afac1428203815148520039f 597 Gene3D G3DSA:1.20.140.70 23 177 2.1E-26 T 14-10-2018 DB29_04348 4ce50455afac1428203815148520039f 597 Pfam PF01432 Peptidase family M3 206 583 7.2E-32 T 14-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 DB29_04348 4ce50455afac1428203815148520039f 597 Gene3D G3DSA:1.10.1370.20 227 597 2.1E-110 T 14-10-2018 DB29_02650 570b7f86eb85c02e94ade74c613d4d6b 262 SUPERFAMILY SSF46785 4 77 5.0E-16 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_02650 570b7f86eb85c02e94ade74c613d4d6b 262 SUPERFAMILY SSF100950 74 234 7.64E-35 T 14-10-2018 IPR037171 NagB/RpiA transferase-like DB29_02650 570b7f86eb85c02e94ade74c613d4d6b 262 Gene3D G3DSA:1.10.10.10 2 58 5.9E-7 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_02650 570b7f86eb85c02e94ade74c613d4d6b 262 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 7.7E-9 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DB29_02650 570b7f86eb85c02e94ade74c613d4d6b 262 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 7.7E-9 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DB29_02650 570b7f86eb85c02e94ade74c613d4d6b 262 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 14-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 DB29_02650 570b7f86eb85c02e94ade74c613d4d6b 262 Pfam PF00455 DeoR C terminal sensor domain 76 233 8.2E-50 T 14-10-2018 IPR014036 DeoR C-terminal sensor domain DB29_02650 570b7f86eb85c02e94ade74c613d4d6b 262 SMART SM01134 72 234 5.3E-69 T 14-10-2018 DB29_02650 570b7f86eb85c02e94ade74c613d4d6b 262 SMART SM00420 6 58 1.1E-15 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DB29_02650 570b7f86eb85c02e94ade74c613d4d6b 262 Pfam PF08220 DeoR-like helix-turn-helix domain 6 60 9.7E-16 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DB29_03380 0cd64149058b0b4b157119ff758a5a55 402 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 102 120 2.6E-8 T 14-10-2018 DB29_03380 0cd64149058b0b4b157119ff758a5a55 402 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 2.6E-8 T 14-10-2018 DB29_03380 0cd64149058b0b4b157119ff758a5a55 402 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 160 178 2.6E-8 T 14-10-2018 DB29_03380 0cd64149058b0b4b157119ff758a5a55 402 SUPERFAMILY SSF51905 4 333 1.37E-32 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB29_03380 0cd64149058b0b4b157119ff758a5a55 402 Gene3D G3DSA:3.50.50.100 3 402 8.2E-139 T 14-10-2018 DB29_03380 0cd64149058b0b4b157119ff758a5a55 402 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 323 3.9E-50 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DB29_03075 e6166137c81b774409461afd9d34b76f 310 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 3 301 4.5E-88 T 14-10-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain DB29_03075 e6166137c81b774409461afd9d34b76f 310 SUPERFAMILY SSF53590 3 308 1.15E-91 T 14-10-2018 IPR036452 Ribonucleoside hydrolase-like DB29_03075 e6166137c81b774409461afd9d34b76f 310 Gene3D G3DSA:3.90.245.10 2 310 4.8E-105 T 14-10-2018 IPR036452 Ribonucleoside hydrolase-like DB29_02311 1b79c09483e7e9297b65abcf81132c2f 208 Gene3D G3DSA:1.10.357.10 7 203 4.8E-37 T 14-10-2018 DB29_02311 1b79c09483e7e9297b65abcf81132c2f 208 SUPERFAMILY SSF46689 17 95 1.21E-17 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DB29_02311 1b79c09483e7e9297b65abcf81132c2f 208 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 23 36 4.6E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DB29_02311 1b79c09483e7e9297b65abcf81132c2f 208 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 44 67 4.6E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DB29_02311 1b79c09483e7e9297b65abcf81132c2f 208 SUPERFAMILY SSF48498 90 202 3.28E-9 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily DB29_02311 1b79c09483e7e9297b65abcf81132c2f 208 Pfam PF00440 Bacterial regulatory proteins, tetR family 23 66 3.5E-14 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DB29_01098 66e5913357d16e6cc610ca5328903571 269 SUPERFAMILY SSF53927 8 265 1.02E-73 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 DB29_01098 66e5913357d16e6cc610ca5328903571 269 Gene3D G3DSA:3.40.140.10 120 269 3.3E-47 T 14-10-2018 DB29_01098 66e5913357d16e6cc610ca5328903571 269 Gene3D G3DSA:3.10.20.10 31 114 2.1E-14 T 14-10-2018 DB29_01098 66e5913357d16e6cc610ca5328903571 269 Pfam PF02634 FdhD/NarQ family 30 265 5.6E-78 T 14-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 DB29_01098 66e5913357d16e6cc610ca5328903571 269 TIGRFAM TIGR00129 fdhD_narQ: formate dehydrogenase family accessory protein FdhD 26 266 6.1E-73 T 14-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 DB29_01098 66e5913357d16e6cc610ca5328903571 269 Hamap MF_00187 Sulfur carrier protein FdhD [fdhD]. 5 266 32.664 T 14-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 DB29_01098 66e5913357d16e6cc610ca5328903571 269 PIRSF PIRSF015626 1 269 3.2E-77 T 14-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 DB29_00768 255965c4da677ba1d6b66b2023fd6ef9 135 SMART SM00530 7 62 2.0E-15 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DB29_00768 255965c4da677ba1d6b66b2023fd6ef9 135 Pfam PF01381 Helix-turn-helix 8 62 9.8E-17 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DB29_00768 255965c4da677ba1d6b66b2023fd6ef9 135 Gene3D G3DSA:1.10.260.40 1 65 2.6E-24 T 14-10-2018 DB29_00768 255965c4da677ba1d6b66b2023fd6ef9 135 SUPERFAMILY SSF47413 2 67 5.9E-19 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DB29_02451 7455a59bff2dee9d62d51af377ee6237 153 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 4 132 1.1E-32 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type DB29_02451 7455a59bff2dee9d62d51af377ee6237 153 Gene3D G3DSA:1.10.10.10 1 142 3.2E-35 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_02451 7455a59bff2dee9d62d51af377ee6237 153 SUPERFAMILY SSF46785 4 134 4.31E-33 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_02451 7455a59bff2dee9d62d51af377ee6237 153 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 51 69 - T 14-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site DB29_02451 7455a59bff2dee9d62d51af377ee6237 153 Pfam PF02082 Transcriptional regulator 4 84 1.9E-21 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type DB29_02980 f173eaa644b5b87b5287aed56e9792da 214 SUPERFAMILY SSF141571 43 212 1.24E-38 T 14-10-2018 DB29_02980 f173eaa644b5b87b5287aed56e9792da 214 Gene3D G3DSA:2.160.20.100 3 212 1.3E-45 T 14-10-2018 DB29_02980 f173eaa644b5b87b5287aed56e9792da 214 Pfam PF13599 Pentapeptide repeats (9 copies) 78 152 3.5E-20 T 14-10-2018 IPR001646 Pentapeptide repeat DB29_00780 aba9808333e838aa26a0780487980558 467 Gene3D G3DSA:1.10.287.130 175 297 8.8E-12 T 14-10-2018 DB29_00780 aba9808333e838aa26a0780487980558 467 SUPERFAMILY SSF47384 222 300 3.73E-11 T 14-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 DB29_00780 aba9808333e838aa26a0780487980558 467 SUPERFAMILY SSF55874 299 457 7.73E-31 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB29_00780 aba9808333e838aa26a0780487980558 467 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 347 454 1.3E-14 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DB29_00780 aba9808333e838aa26a0780487980558 467 PRINTS PR01780 Lantibiotic regulatory protein signature 407 422 3.2E-11 T 14-10-2018 IPR008358 Signal transduction histidine kinase/phosphatase, lantibiotic regulatory protein MprB GO:0000155|GO:0000160|GO:0004673|GO:0016020 DB29_00780 aba9808333e838aa26a0780487980558 467 PRINTS PR01780 Lantibiotic regulatory protein signature 209 223 3.2E-11 T 14-10-2018 IPR008358 Signal transduction histidine kinase/phosphatase, lantibiotic regulatory protein MprB GO:0000155|GO:0000160|GO:0004673|GO:0016020 DB29_00780 aba9808333e838aa26a0780487980558 467 PRINTS PR01780 Lantibiotic regulatory protein signature 246 262 3.2E-11 T 14-10-2018 IPR008358 Signal transduction histidine kinase/phosphatase, lantibiotic regulatory protein MprB GO:0000155|GO:0000160|GO:0004673|GO:0016020 DB29_00780 aba9808333e838aa26a0780487980558 467 PRINTS PR01780 Lantibiotic regulatory protein signature 342 357 3.2E-11 T 14-10-2018 IPR008358 Signal transduction histidine kinase/phosphatase, lantibiotic regulatory protein MprB GO:0000155|GO:0000160|GO:0004673|GO:0016020 DB29_00780 aba9808333e838aa26a0780487980558 467 Gene3D G3DSA:3.30.565.10 306 464 5.6E-28 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB29_00780 aba9808333e838aa26a0780487980558 467 SMART SM00388 237 302 8.7E-11 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DB29_00780 aba9808333e838aa26a0780487980558 467 SMART SM00387 346 457 3.6E-23 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DB29_00780 aba9808333e838aa26a0780487980558 467 Pfam PF00512 His Kinase A (phospho-acceptor) domain 237 300 1.8E-9 T 14-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 DB29_01885 c3ee69ed49053340c9970fe21bee9551 166 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 163 37.322 T 14-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 DB29_01885 c3ee69ed49053340c9970fe21bee9551 166 SUPERFAMILY SSF54211 80 159 1.57E-27 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DB29_01885 c3ee69ed49053340c9970fe21bee9551 166 Pfam PF00333 Ribosomal protein S5, N-terminal domain 11 75 3.1E-33 T 14-10-2018 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 DB29_01885 c3ee69ed49053340c9970fe21bee9551 166 SUPERFAMILY SSF54768 7 76 4.92E-26 T 14-10-2018 DB29_01885 c3ee69ed49053340c9970fe21bee9551 166 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 10 163 9.7E-73 T 14-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 DB29_01885 c3ee69ed49053340c9970fe21bee9551 166 ProSitePatterns PS00585 Ribosomal protein S5 signature. 28 60 - T 14-10-2018 IPR018192 Ribosomal protein S5, N-terminal, conserved site DB29_01885 c3ee69ed49053340c9970fe21bee9551 166 Gene3D G3DSA:3.30.160.20 1 73 1.1E-35 T 14-10-2018 DB29_01885 c3ee69ed49053340c9970fe21bee9551 166 Pfam PF03719 Ribosomal protein S5, C-terminal domain 87 157 5.6E-32 T 14-10-2018 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 DB29_01885 c3ee69ed49053340c9970fe21bee9551 166 Gene3D G3DSA:3.30.230.10 74 166 2.7E-38 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DB29_03643 e7c7bcc036d17f2c3f8d9365b195e20e 264 SUPERFAMILY SSF52540 5 245 2.06E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_03643 e7c7bcc036d17f2c3f8d9365b195e20e 264 Pfam PF13614 AAA domain 4 160 2.0E-26 T 14-10-2018 IPR025669 AAA domain DB29_03643 e7c7bcc036d17f2c3f8d9365b195e20e 264 Gene3D G3DSA:3.40.50.300 3 253 8.3E-70 T 14-10-2018 DB29_03643 e7c7bcc036d17f2c3f8d9365b195e20e 264 TIGRFAM TIGR01968 minD_bact: septum site-determining protein MinD 3 261 3.1E-124 T 14-10-2018 IPR010223 ATP binding protein MinD, bacterial-type GO:0016887 DB29_03643 e7c7bcc036d17f2c3f8d9365b195e20e 264 PIRSF PIRSF003092 1 264 8.9E-95 T 14-10-2018 IPR025501 ATP binding protein MinD DB29_01361 6f7bb7e99a27f22a44215c68d9c78d8d 309 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 103 301 2.9E-12 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DB29_01361 6f7bb7e99a27f22a44215c68d9c78d8d 309 Gene3D G3DSA:1.10.3720.10 67 309 8.6E-67 T 14-10-2018 IPR035906 MetI-like superfamily DB29_01361 6f7bb7e99a27f22a44215c68d9c78d8d 309 SUPERFAMILY SSF161098 71 301 4.32E-59 T 14-10-2018 IPR035906 MetI-like superfamily DB29_00279 1467bd1b443f6726e537b28e2f8b3c45 219 Pfam PF01940 Integral membrane protein DUF92 2 207 3.3E-48 T 14-10-2018 IPR002794 Protein of unknown function DUF92, TMEM19 GO:0016021 DB29_02344 8e9ecb11353c7f1a762494a5b0a0ac26 161 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 11 156 4.8E-39 T 14-10-2018 IPR005864 ATP synthase, F0 complex, subunit b, bacterial GO:0015078|GO:0015986|GO:0045263 DB29_02344 8e9ecb11353c7f1a762494a5b0a0ac26 161 SUPERFAMILY SSF81573 64 122 3.53E-11 T 14-10-2018 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily DB29_02344 8e9ecb11353c7f1a762494a5b0a0ac26 161 Pfam PF00430 ATP synthase B/B' CF(0) 8 138 3.2E-40 T 14-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 DB29_02344 8e9ecb11353c7f1a762494a5b0a0ac26 161 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 139 13.961 T 14-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 DB29_00743 d04274218b87b016f26f4898e20c7efc 334 SUPERFAMILY SSF161098 90 318 1.29E-21 T 14-10-2018 IPR035906 MetI-like superfamily DB29_00743 d04274218b87b016f26f4898e20c7efc 334 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 332 4.2E-43 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DB29_04289 ebf9f6fa71aa20d98ff34aa2f7a853ea 233 Gene3D G3DSA:3.40.50.10320 3 233 3.6E-72 T 14-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 DB29_04289 ebf9f6fa71aa20d98ff34aa2f7a853ea 233 TIGRFAM TIGR04001 thiol_BshB1: bacillithiol biosynthesis deacetylase BshB1 4 223 8.1E-90 T 14-10-2018 IPR023842 Bacillithiol biosynthesis deacetylase, BshB1 GO:0019213|GO:0071793 DB29_04289 ebf9f6fa71aa20d98ff34aa2f7a853ea 233 Pfam PF02585 GlcNAc-PI de-N-acetylase 9 124 2.9E-20 T 14-10-2018 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related Reactome: R-HSA-162710 DB29_04289 ebf9f6fa71aa20d98ff34aa2f7a853ea 233 SUPERFAMILY SSF102588 6 227 8.11E-51 T 14-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 DB29_01197 070efbf5514bb53fa629d0bf6a513d13 117 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 8 116 5.0E-51 T 14-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 DB29_01197 070efbf5514bb53fa629d0bf6a513d13 117 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 1 116 1.6E-33 T 14-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 DB29_01197 070efbf5514bb53fa629d0bf6a513d13 117 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 1 116 1.6E-29 T 14-10-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 DB29_01197 070efbf5514bb53fa629d0bf6a513d13 117 Gene3D G3DSA:3.90.470.20 1 117 2.3E-37 T 14-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 DB29_01197 070efbf5514bb53fa629d0bf6a513d13 117 SUPERFAMILY SSF56214 1 116 1.22E-33 T 14-10-2018 IPR037143 4'-phosphopantetheinyl transferase domain superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 DB29_01197 070efbf5514bb53fa629d0bf6a513d13 117 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 3 117 24.556 T 14-10-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289 DB29_01197 070efbf5514bb53fa629d0bf6a513d13 117 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 4 111 1.7E-19 T 14-10-2018 IPR008278 4'-phosphopantetheinyl transferase domain GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|MetaCyc: PWY-6289|Reactome: R-HSA-199220 DB29_04192 60686b8e27374ae2b723d75a8d5ab2a9 416 Pfam PF08028 Acyl-CoA dehydrogenase, C-terminal domain 274 393 6.4E-14 T 14-10-2018 IPR013107 Acyl-CoA dehydrogenase, C-terminal domain DB29_04192 60686b8e27374ae2b723d75a8d5ab2a9 416 PIRSF PIRSF016578 27 416 3.1E-28 T 14-10-2018 DB29_04192 60686b8e27374ae2b723d75a8d5ab2a9 416 Gene3D G3DSA:2.40.110.10 156 260 3.2E-24 T 14-10-2018 DB29_04192 60686b8e27374ae2b723d75a8d5ab2a9 416 Gene3D G3DSA:1.10.540.10 37 147 3.5E-12 T 14-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 DB29_04192 60686b8e27374ae2b723d75a8d5ab2a9 416 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 156 249 8.0E-18 T 14-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 DB29_04192 60686b8e27374ae2b723d75a8d5ab2a9 416 SUPERFAMILY SSF47203 269 414 2.09E-22 T 14-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 DB29_04192 60686b8e27374ae2b723d75a8d5ab2a9 416 Gene3D G3DSA:1.20.140.10 267 410 6.2E-27 T 14-10-2018 DB29_04192 60686b8e27374ae2b723d75a8d5ab2a9 416 SUPERFAMILY SSF56645 56 258 2.88E-40 T 14-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 DB29_02687 f839d967175942dfa5040e633c1f8ad2 112 SMART SM00530 7 62 1.1E-15 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DB29_02687 f839d967175942dfa5040e633c1f8ad2 112 Pfam PF01381 Helix-turn-helix 8 62 4.3E-15 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DB29_02687 f839d967175942dfa5040e633c1f8ad2 112 Gene3D G3DSA:1.10.260.40 1 66 5.6E-21 T 14-10-2018 DB29_02687 f839d967175942dfa5040e633c1f8ad2 112 SUPERFAMILY SSF47413 2 67 9.12E-17 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DB29_04143 bdaee2e8e34e2bfe03ab7dedc3729448 141 Gene3D G3DSA:2.60.40.790 12 141 1.2E-20 T 14-10-2018 IPR008978 HSP20-like chaperone DB29_04143 bdaee2e8e34e2bfe03ab7dedc3729448 141 Pfam PF00011 Hsp20/alpha crystallin family 44 135 1.1E-9 T 14-10-2018 IPR002068 Alpha crystallin/Hsp20 domain DB29_04143 bdaee2e8e34e2bfe03ab7dedc3729448 141 SUPERFAMILY SSF49764 17 134 1.12E-17 T 14-10-2018 IPR008978 HSP20-like chaperone DB29_02985 8e9ec51aa32741abb497ce725a248277 612 SUPERFAMILY SSF53649 241 610 2.13E-63 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 DB29_02985 8e9ec51aa32741abb497ce725a248277 612 PIRSF PIRSF005091 1 612 2.9E-155 T 14-10-2018 IPR012160 Lipoteichoic acid synthase-like DB29_02985 8e9ec51aa32741abb497ce725a248277 612 Gene3D G3DSA:3.40.720.10 235 540 2.5E-70 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 DB29_02985 8e9ec51aa32741abb497ce725a248277 612 Pfam PF00884 Sulfatase 243 530 1.3E-37 T 14-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 DB29_03975 2994fc0fde0f2ef08a639b412c430f27 260 ProSitePatterns PS00517 Ribonuclease III family signature. 72 80 - T 14-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 DB29_03975 2994fc0fde0f2ef08a639b412c430f27 260 Hamap MF_00104 Ribonuclease 3 [rnc]. 36 252 31.369 T 14-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 DB29_03975 2994fc0fde0f2ef08a639b412c430f27 260 Pfam PF00035 Double-stranded RNA binding motif 190 255 1.3E-16 T 14-10-2018 IPR014720 Double-stranded RNA-binding domain DB29_03975 2994fc0fde0f2ef08a639b412c430f27 260 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 39 253 3.9E-78 T 14-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 DB29_03975 2994fc0fde0f2ef08a639b412c430f27 260 SMART SM00535 48 183 1.2E-56 T 14-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 DB29_03975 2994fc0fde0f2ef08a639b412c430f27 260 SUPERFAMILY SSF69065 32 186 5.06E-51 T 14-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 DB29_03975 2994fc0fde0f2ef08a639b412c430f27 260 Gene3D G3DSA:1.10.1520.10 29 182 1.0E-46 T 14-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 DB29_03975 2994fc0fde0f2ef08a639b412c430f27 260 SMART SM00358 189 256 1.3E-21 T 14-10-2018 IPR014720 Double-stranded RNA-binding domain DB29_03975 2994fc0fde0f2ef08a639b412c430f27 260 SUPERFAMILY SSF54768 145 257 1.43E-23 T 14-10-2018 DB29_03975 2994fc0fde0f2ef08a639b412c430f27 260 Gene3D G3DSA:3.30.160.20 188 254 3.2E-22 T 14-10-2018 DB29_03975 2994fc0fde0f2ef08a639b412c430f27 260 Pfam PF14622 Ribonuclease-III-like 46 175 1.0E-36 T 14-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 DB29_02749 21c456a52b2dd40039faa9bea79802f7 175 SUPERFAMILY SSF109854 3 154 1.83E-32 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes DB29_02749 21c456a52b2dd40039faa9bea79802f7 175 Pfam PF12867 DinB superfamily 12 150 4.2E-14 T 14-10-2018 IPR024775 DinB-like domain DB29_02749 21c456a52b2dd40039faa9bea79802f7 175 Gene3D G3DSA:1.20.120.450 1 171 9.2E-44 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes DB29_00975 efcca49e09126aff9acaeb4db73af7a5 223 Pfam PF00072 Response regulator receiver domain 3 114 3.0E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DB29_00975 efcca49e09126aff9acaeb4db73af7a5 223 SMART SM00448 1 114 2.8E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DB29_00975 efcca49e09126aff9acaeb4db73af7a5 223 Pfam PF12431 Transcriptional regulator 130 159 3.6E-9 T 14-10-2018 IPR028141 Transcriptional regulator DB29_00975 efcca49e09126aff9acaeb4db73af7a5 223 PIRSF PIRSF006171 1 223 4.2E-74 T 14-10-2018 IPR024187 Signal transduction response regulator, citrate/malate metabolism GO:0000160|GO:0003700 DB29_00975 efcca49e09126aff9acaeb4db73af7a5 223 SUPERFAMILY SSF52172 1 133 1.37E-30 T 14-10-2018 IPR011006 CheY-like superfamily DB29_00975 efcca49e09126aff9acaeb4db73af7a5 223 Gene3D G3DSA:3.40.50.12740 1 213 9.9E-32 T 14-10-2018 DB29_03160 3f37f9bac39422482ad4ea2eb18af0dc 126 SMART SM00345 15 74 6.2E-6 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DB29_03160 3f37f9bac39422482ad4ea2eb18af0dc 126 Gene3D G3DSA:1.10.10.10 8 126 1.8E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_03160 3f37f9bac39422482ad4ea2eb18af0dc 126 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 73 5.4E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DB29_03160 3f37f9bac39422482ad4ea2eb18af0dc 126 SUPERFAMILY SSF46785 4 78 1.13E-12 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_03167 94d4b639dfea05c01b56654ee4c56e94 521 SUPERFAMILY SSF51445 7 346 4.95E-92 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily DB29_03167 94d4b639dfea05c01b56654ee4c56e94 521 Gene3D G3DSA:3.40.50.1700 343 520 1.3E-12 T 14-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 DB29_03167 94d4b639dfea05c01b56654ee4c56e94 521 Gene3D G3DSA:3.20.20.300 2 342 7.9E-118 T 14-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 DB29_03167 94d4b639dfea05c01b56654ee4c56e94 521 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 9 325 8.1E-95 T 14-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 DB29_02264 75773d7c36bb9459b95b96d820d58253 346 Pfam PF05145 Transition state regulatory protein AbrB 27 337 7.4E-67 T 14-10-2018 IPR007820 AbrB family GO:0010468|GO:0016021 DB29_02264 75773d7c36bb9459b95b96d820d58253 346 PIRSF PIRSF038991 1 346 4.8E-95 T 14-10-2018 IPR007820 AbrB family GO:0010468|GO:0016021 DB29_02264 75773d7c36bb9459b95b96d820d58253 346 TIGRFAM TIGR03082 Gneg_AbrB_dup: membrane protein AbrB duplication 5 158 4.3E-38 T 14-10-2018 IPR017516 AbrB duplication DB29_02264 75773d7c36bb9459b95b96d820d58253 346 TIGRFAM TIGR03082 Gneg_AbrB_dup: membrane protein AbrB duplication 183 337 3.9E-32 T 14-10-2018 IPR017516 AbrB duplication DB29_01524 ac9191610053c57bc10a86b0fc21182e 427 SUPERFAMILY SSF53448 196 413 3.09E-36 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DB29_01524 ac9191610053c57bc10a86b0fc21182e 427 Pfam PF00535 Glycosyl transferase family 2 200 308 6.3E-18 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 DB29_01524 ac9191610053c57bc10a86b0fc21182e 427 Gene3D G3DSA:3.90.550.10 146 425 1.2E-35 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DB29_00683 bcd752176de8e5196418e6c160a77399 120 SUPERFAMILY SSF55781 11 114 8.63E-8 T 14-10-2018 DB29_00943 02167fec2b6206e82bb9e05a5a22c4e0 171 Pfam PF00583 Acetyltransferase (GNAT) family 43 139 2.6E-11 T 14-10-2018 IPR000182 GNAT domain DB29_00943 02167fec2b6206e82bb9e05a5a22c4e0 171 SUPERFAMILY SSF55729 13 167 7.2E-24 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase DB29_00943 02167fec2b6206e82bb9e05a5a22c4e0 171 Gene3D G3DSA:3.40.630.30 2 169 7.1E-41 T 14-10-2018 DB29_02194 ee4c7f72a6114985fae3f494d0ac8f54 220 SMART SM00382 32 211 7.4E-5 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_02194 ee4c7f72a6114985fae3f494d0ac8f54 220 Pfam PF00005 ABC transporter 23 169 3.3E-20 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB29_02194 ee4c7f72a6114985fae3f494d0ac8f54 220 SUPERFAMILY SSF52540 3 217 2.17E-34 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_02194 ee4c7f72a6114985fae3f494d0ac8f54 220 Gene3D G3DSA:3.40.50.300 1 219 2.0E-36 T 14-10-2018 DB29_01907 3908aa0bf4e964148930fa0494c20310 139 PRINTS PR01034 Ribosomal protein S12 signature 40 55 3.5E-59 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DB29_01907 3908aa0bf4e964148930fa0494c20310 139 PRINTS PR01034 Ribosomal protein S12 signature 55 70 3.5E-59 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DB29_01907 3908aa0bf4e964148930fa0494c20310 139 PRINTS PR01034 Ribosomal protein S12 signature 71 90 3.5E-59 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DB29_01907 3908aa0bf4e964148930fa0494c20310 139 PRINTS PR01034 Ribosomal protein S12 signature 90 107 3.5E-59 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DB29_01907 3908aa0bf4e964148930fa0494c20310 139 PRINTS PR01034 Ribosomal protein S12 signature 107 123 3.5E-59 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DB29_01907 3908aa0bf4e964148930fa0494c20310 139 PRINTS PR01034 Ribosomal protein S12 signature 123 135 3.5E-59 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DB29_01907 3908aa0bf4e964148930fa0494c20310 139 SUPERFAMILY SSF50249 2 137 2.66E-49 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DB29_01907 3908aa0bf4e964148930fa0494c20310 139 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 136 40.846 T 14-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB29_01907 3908aa0bf4e964148930fa0494c20310 139 PIRSF PIRSF002133 1 137 2.2E-49 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DB29_01907 3908aa0bf4e964148930fa0494c20310 139 ProSitePatterns PS00055 Ribosomal protein S12 signature. 56 63 - T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DB29_01907 3908aa0bf4e964148930fa0494c20310 139 Pfam PF00164 Ribosomal protein S12/S23 32 136 3.6E-38 T 14-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DB29_01907 3908aa0bf4e964148930fa0494c20310 139 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 136 8.9E-69 T 14-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB29_01907 3908aa0bf4e964148930fa0494c20310 139 Gene3D G3DSA:2.40.50.140 1 139 1.8E-62 T 14-10-2018 DB29_00867 6a134dac1f4db461dd11d1d41a18fb89 311 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 4 302 8.4E-82 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit DB29_00867 6a134dac1f4db461dd11d1d41a18fb89 311 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 3 307 7.4E-92 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 DB29_04170 609eeafc3bf6719e088d526fb81d00e1 148 SUPERFAMILY SSF82784 2 139 3.8E-34 T 14-10-2018 IPR036102 OsmC/Ohr superfamily DB29_04170 609eeafc3bf6719e088d526fb81d00e1 148 Gene3D G3DSA:3.30.300.20 6 141 1.3E-33 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta DB29_04170 609eeafc3bf6719e088d526fb81d00e1 148 Pfam PF02566 OsmC-like protein 38 137 4.3E-19 T 14-10-2018 IPR003718 OsmC/Ohr family DB29_04170 609eeafc3bf6719e088d526fb81d00e1 148 TIGRFAM TIGR03563 perox_SACOL1771: peroxiredoxin, SACOL1771 subfamily 3 137 3.7E-64 T 14-10-2018 IPR019905 Peroxiredoxin OsmC-like protein, Firmicutes DB29_00194 c5eb6d628b35ebc4249ca413a684be2d 443 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 19 431 39.568 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DB29_00194 c5eb6d628b35ebc4249ca413a684be2d 443 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 40 296 1.0E-64 T 14-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 DB29_00194 c5eb6d628b35ebc4249ca413a684be2d 443 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 9 430 2.3E-151 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DB29_00194 c5eb6d628b35ebc4249ca413a684be2d 443 SUPERFAMILY SSF51419 30 299 4.22E-79 T 14-10-2018 IPR029066 PLP-binding barrel DB29_00194 c5eb6d628b35ebc4249ca413a684be2d 443 Gene3D G3DSA:2.40.37.10 17 427 1.0E-153 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 DB29_00194 c5eb6d628b35ebc4249ca413a684be2d 443 Gene3D G3DSA:3.20.20.10 38 297 1.0E-153 T 14-10-2018 IPR029066 PLP-binding barrel DB29_00194 c5eb6d628b35ebc4249ca413a684be2d 443 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 35 388 1.0E-15 T 14-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 DB29_00194 c5eb6d628b35ebc4249ca413a684be2d 443 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 83 95 5.3E-16 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 DB29_00194 c5eb6d628b35ebc4249ca413a684be2d 443 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 388 401 5.3E-16 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 DB29_00194 c5eb6d628b35ebc4249ca413a684be2d 443 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 287 306 5.3E-16 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 DB29_00194 c5eb6d628b35ebc4249ca413a684be2d 443 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 198 211 5.3E-16 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 DB29_00194 c5eb6d628b35ebc4249ca413a684be2d 443 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 63 81 5.3E-16 T 14-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 DB29_00194 c5eb6d628b35ebc4249ca413a684be2d 443 SUPERFAMILY SSF50621 275 431 1.05E-51 T 14-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 DB29_00194 c5eb6d628b35ebc4249ca413a684be2d 443 PRINTS PR01181 Diaminopimelate decarboxylase signature 398 420 5.9E-27 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DB29_00194 c5eb6d628b35ebc4249ca413a684be2d 443 PRINTS PR01181 Diaminopimelate decarboxylase signature 316 334 5.9E-27 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DB29_00194 c5eb6d628b35ebc4249ca413a684be2d 443 PRINTS PR01181 Diaminopimelate decarboxylase signature 81 98 5.9E-27 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DB29_00194 c5eb6d628b35ebc4249ca413a684be2d 443 PRINTS PR01181 Diaminopimelate decarboxylase signature 170 179 5.9E-27 T 14-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DB29_02373 f21fc2a4f13fe2d4b3e34449d1bb0d88 417 Gene3D G3DSA:3.90.1720.10 293 417 4.0E-41 T 14-10-2018 DB29_02373 f21fc2a4f13fe2d4b3e34449d1bb0d88 417 SUPERFAMILY SSF47090 121 186 6.02E-20 T 14-10-2018 IPR036365 PGBD-like superfamily DB29_02373 f21fc2a4f13fe2d4b3e34449d1bb0d88 417 Gene3D G3DSA:1.10.101.10 201 276 1.3E-23 T 14-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 DB29_02373 f21fc2a4f13fe2d4b3e34449d1bb0d88 417 Gene3D G3DSA:1.10.101.10 115 190 8.8E-23 T 14-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 DB29_02373 f21fc2a4f13fe2d4b3e34449d1bb0d88 417 Gene3D G3DSA:1.10.101.10 28 102 4.8E-21 T 14-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 DB29_02373 f21fc2a4f13fe2d4b3e34449d1bb0d88 417 SUPERFAMILY SSF54001 294 416 8.83E-41 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily DB29_02373 f21fc2a4f13fe2d4b3e34449d1bb0d88 417 Pfam PF00877 NlpC/P60 family 313 414 3.6E-31 T 14-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain DB29_02373 f21fc2a4f13fe2d4b3e34449d1bb0d88 417 Pfam PF01471 Putative peptidoglycan binding domain 131 186 4.8E-19 T 14-10-2018 IPR002477 Peptidoglycan binding-like DB29_02373 f21fc2a4f13fe2d4b3e34449d1bb0d88 417 Pfam PF01471 Putative peptidoglycan binding domain 42 98 5.7E-17 T 14-10-2018 IPR002477 Peptidoglycan binding-like DB29_02373 f21fc2a4f13fe2d4b3e34449d1bb0d88 417 Pfam PF01471 Putative peptidoglycan binding domain 217 272 5.3E-20 T 14-10-2018 IPR002477 Peptidoglycan binding-like DB29_02373 f21fc2a4f13fe2d4b3e34449d1bb0d88 417 SUPERFAMILY SSF47090 32 98 2.56E-19 T 14-10-2018 IPR036365 PGBD-like superfamily DB29_02373 f21fc2a4f13fe2d4b3e34449d1bb0d88 417 SUPERFAMILY SSF47090 204 273 1.22E-21 T 14-10-2018 IPR036365 PGBD-like superfamily DB29_04144 4cf6d6d203eb9c42dc976b99f48cf744 307 Pfam PF01244 Membrane dipeptidase (Peptidase family M19) 2 301 1.8E-91 T 14-10-2018 IPR008257 Peptidase M19 GO:0006508|GO:0016805 MetaCyc: PWY-7533|Reactome: R-HSA-2142691|Reactome: R-HSA-5423646 DB29_04144 4cf6d6d203eb9c42dc976b99f48cf744 307 Gene3D G3DSA:3.20.20.140 1 304 3.8E-103 T 14-10-2018 DB29_04144 4cf6d6d203eb9c42dc976b99f48cf744 307 SUPERFAMILY SSF51556 1 301 1.5E-73 T 14-10-2018 IPR032466 Metal-dependent hydrolase DB29_01641 4bae34a09539a0b95a90a4945b4441fd 386 Pfam PF02653 Branched-chain amino acid transport system / permease component 41 376 1.7E-45 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 DB29_00660 c57339f7419be202ac371f54a85c8990 143 SUPERFAMILY SSF46785 8 138 8.35E-42 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_00660 c57339f7419be202ac371f54a85c8990 143 Gene3D G3DSA:1.10.10.10 1 87 2.9E-32 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_00660 c57339f7419be202ac371f54a85c8990 143 Pfam PF01475 Ferric uptake regulator family 17 133 8.1E-39 T 14-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 DB29_00660 c57339f7419be202ac371f54a85c8990 143 Gene3D G3DSA:3.30.1490.190 88 143 1.6E-24 T 14-10-2018 DB29_02329 2c7e2ba21b8dd40c6d7fef21cad41d10 342 Gene3D G3DSA:3.90.870.10 10 221 4.6E-82 T 14-10-2018 DB29_02329 2c7e2ba21b8dd40c6d7fef21cad41d10 342 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 18 216 1.2E-63 T 14-10-2018 IPR006070 YrdC-like domain GO:0003725 DB29_02329 2c7e2ba21b8dd40c6d7fef21cad41d10 342 PIRSF PIRSF004930 4 342 9.6E-124 T 14-10-2018 IPR010923 tRNA threonylcarbamoyladenosine biosynthesis protein SUA5 DB29_02329 2c7e2ba21b8dd40c6d7fef21cad41d10 342 Pfam PF03481 Putative GTP-binding controlling metal-binding 207 338 3.1E-26 T 14-10-2018 IPR005145 Putative GTP-binding controlling metal-binding domain DB29_02329 2c7e2ba21b8dd40c6d7fef21cad41d10 342 Pfam PF01300 Telomere recombination 31 205 2.7E-57 T 14-10-2018 IPR006070 YrdC-like domain GO:0003725 DB29_02329 2c7e2ba21b8dd40c6d7fef21cad41d10 342 Gene3D G3DSA:3.40.50.11030 224 342 1.9E-33 T 14-10-2018 IPR038385 Threonylcarbamoyl-AMP synthase, C-terminal domain superfamily DB29_02329 2c7e2ba21b8dd40c6d7fef21cad41d10 342 SUPERFAMILY SSF55821 18 218 1.71E-65 T 14-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily DB29_03413 1d624d36d740b7160c2b08663b51c59b 273 Pfam PF00005 ABC transporter 39 185 5.1E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB29_03413 1d624d36d740b7160c2b08663b51c59b 273 SUPERFAMILY SSF52540 23 250 5.55E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_03413 1d624d36d740b7160c2b08663b51c59b 273 Gene3D G3DSA:3.40.50.300 17 272 1.2E-67 T 14-10-2018 DB29_03413 1d624d36d740b7160c2b08663b51c59b 273 SMART SM00382 47 234 1.3E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_00591 5de11ba1862a0931eb56a593bfc231d4 201 SUPERFAMILY SSF53271 1 189 1.56E-43 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like DB29_00591 5de11ba1862a0931eb56a593bfc231d4 201 Pfam PF00156 Phosphoribosyl transferase domain 43 157 5.5E-9 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 DB29_00591 5de11ba1862a0931eb56a593bfc231d4 201 Hamap MF_01184 Xanthine phosphoribosyltransferase [xpt]. 1 190 41.419 T 14-10-2018 IPR010079 Xanthine phosphoribosyltransferase GO:0016763|GO:0043101|GO:0046110 KEGG: 00230+2.4.2.22 DB29_00591 5de11ba1862a0931eb56a593bfc231d4 201 TIGRFAM TIGR01744 XPRTase: xanthine phosphoribosyltransferase 1 192 2.5E-81 T 14-10-2018 IPR010079 Xanthine phosphoribosyltransferase GO:0016763|GO:0043101|GO:0046110 KEGG: 00230+2.4.2.22 DB29_00591 5de11ba1862a0931eb56a593bfc231d4 201 Gene3D G3DSA:3.40.50.2020 3 189 4.7E-51 T 14-10-2018 DB29_03487 e716847476d38c0a631fb21ba58c5adf 396 PRINTS PR01270 Histone deacetylase superfamily signature 250 260 2.8E-17 T 14-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 DB29_03487 e716847476d38c0a631fb21ba58c5adf 396 PRINTS PR01270 Histone deacetylase superfamily signature 164 179 2.8E-17 T 14-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 DB29_03487 e716847476d38c0a631fb21ba58c5adf 396 PRINTS PR01270 Histone deacetylase superfamily signature 131 154 2.8E-17 T 14-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 DB29_03487 e716847476d38c0a631fb21ba58c5adf 396 Gene3D G3DSA:3.40.800.20 4 378 5.7E-98 T 14-10-2018 IPR037138 Histone deacetylase domain superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 DB29_03487 e716847476d38c0a631fb21ba58c5adf 396 SUPERFAMILY SSF52768 6 358 1.92E-104 T 14-10-2018 IPR023696 Ureohydrolase domain superfamily DB29_03487 e716847476d38c0a631fb21ba58c5adf 396 PRINTS PR01272 Acetoin utilisation ACUC protein signature 314 333 1.2E-28 T 14-10-2018 IPR003085 Acetoin utilization protein AcuC GO:0045149 DB29_03487 e716847476d38c0a631fb21ba58c5adf 396 PRINTS PR01272 Acetoin utilisation ACUC protein signature 87 101 1.2E-28 T 14-10-2018 IPR003085 Acetoin utilization protein AcuC GO:0045149 DB29_03487 e716847476d38c0a631fb21ba58c5adf 396 PRINTS PR01272 Acetoin utilisation ACUC protein signature 17 37 1.2E-28 T 14-10-2018 IPR003085 Acetoin utilization protein AcuC GO:0045149 DB29_03487 e716847476d38c0a631fb21ba58c5adf 396 PRINTS PR01272 Acetoin utilisation ACUC protein signature 108 121 1.2E-28 T 14-10-2018 IPR003085 Acetoin utilization protein AcuC GO:0045149 DB29_03487 e716847476d38c0a631fb21ba58c5adf 396 PRINTS PR01272 Acetoin utilisation ACUC protein signature 351 370 1.2E-28 T 14-10-2018 IPR003085 Acetoin utilization protein AcuC GO:0045149 DB29_03487 e716847476d38c0a631fb21ba58c5adf 396 PRINTS PR01272 Acetoin utilisation ACUC protein signature 275 291 1.2E-28 T 14-10-2018 IPR003085 Acetoin utilization protein AcuC GO:0045149 DB29_03487 e716847476d38c0a631fb21ba58c5adf 396 Pfam PF00850 Histone deacetylase domain 23 317 5.5E-75 T 14-10-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 DB29_03430 5c280f547c01fcc1fbf98fefa660b9de 405 PIRSF PIRSF000497 2 400 2.1E-178 T 14-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 DB29_03430 5c280f547c01fcc1fbf98fefa660b9de 405 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 275 283 - T 14-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 DB29_03430 5c280f547c01fcc1fbf98fefa660b9de 405 Pfam PF02772 S-adenosylmethionine synthetase, central domain 130 247 6.6E-49 T 14-10-2018 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 DB29_03430 5c280f547c01fcc1fbf98fefa660b9de 405 Gene3D G3DSA:3.30.300.10 106 391 2.0E-180 T 14-10-2018 DB29_03430 5c280f547c01fcc1fbf98fefa660b9de 405 SUPERFAMILY SSF55973 127 248 2.55E-52 T 14-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 DB29_03430 5c280f547c01fcc1fbf98fefa660b9de 405 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 6 399 58.87 T 14-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 DB29_03430 5c280f547c01fcc1fbf98fefa660b9de 405 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 249 387 1.2E-69 T 14-10-2018 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 DB29_03430 5c280f547c01fcc1fbf98fefa660b9de 405 SUPERFAMILY SSF55973 7 113 1.96E-48 T 14-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 DB29_03430 5c280f547c01fcc1fbf98fefa660b9de 405 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 131 141 - T 14-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 DB29_03430 5c280f547c01fcc1fbf98fefa660b9de 405 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 9 397 2.7E-186 T 14-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 DB29_03430 5c280f547c01fcc1fbf98fefa660b9de 405 Gene3D G3DSA:3.30.300.10 9 249 2.0E-180 T 14-10-2018 DB29_03430 5c280f547c01fcc1fbf98fefa660b9de 405 Gene3D G3DSA:3.30.300.10 15 286 2.0E-180 T 14-10-2018 DB29_03430 5c280f547c01fcc1fbf98fefa660b9de 405 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 8 105 1.4E-44 T 14-10-2018 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 DB29_03430 5c280f547c01fcc1fbf98fefa660b9de 405 SUPERFAMILY SSF55973 249 397 1.02E-69 T 14-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 DB29_00188 124d4f1cf5c55ac4eed1daedaba2672f 373 Gene3D G3DSA:1.10.580.10 33 357 1.6E-110 T 14-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 DB29_00188 124d4f1cf5c55ac4eed1daedaba2672f 373 ProSitePatterns PS00480 Citrate synthase signature. 259 272 - T 14-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 DB29_00188 124d4f1cf5c55ac4eed1daedaba2672f 373 PRINTS PR00143 Citrate synthase signature 330 344 2.8E-35 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 DB29_00188 124d4f1cf5c55ac4eed1daedaba2672f 373 PRINTS PR00143 Citrate synthase signature 128 141 2.8E-35 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 DB29_00188 124d4f1cf5c55ac4eed1daedaba2672f 373 PRINTS PR00143 Citrate synthase signature 177 192 2.8E-35 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 DB29_00188 124d4f1cf5c55ac4eed1daedaba2672f 373 PRINTS PR00143 Citrate synthase signature 252 272 2.8E-35 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 DB29_00188 124d4f1cf5c55ac4eed1daedaba2672f 373 PRINTS PR00143 Citrate synthase signature 310 326 2.8E-35 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 DB29_00188 124d4f1cf5c55ac4eed1daedaba2672f 373 PRINTS PR00143 Citrate synthase signature 199 227 2.8E-35 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 DB29_00188 124d4f1cf5c55ac4eed1daedaba2672f 373 SUPERFAMILY SSF48256 6 368 1.83E-121 T 14-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 DB29_00188 124d4f1cf5c55ac4eed1daedaba2672f 373 Gene3D G3DSA:1.10.230.10 225 324 1.6E-110 T 14-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain DB29_00188 124d4f1cf5c55ac4eed1daedaba2672f 373 PIRSF PIRSF001369 1 373 7.3E-136 T 14-10-2018 IPR024176 Citrate synthase, bacterial-type DB29_00188 124d4f1cf5c55ac4eed1daedaba2672f 373 Pfam PF00285 Citrate synthase, C-terminal domain 10 360 4.8E-112 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 DB29_01815 22a8ec260f376b3378fc121cf11f6ae5 977 Gene3D G3DSA:3.40.50.300 5 279 4.4E-72 T 14-10-2018 DB29_01815 22a8ec260f376b3378fc121cf11f6ae5 977 SMART SM00382 36 239 3.9E-18 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_01815 22a8ec260f376b3378fc121cf11f6ae5 977 Pfam PF02687 FtsX-like permease family 345 429 1.8E-7 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 DB29_01815 22a8ec260f376b3378fc121cf11f6ae5 977 SUPERFAMILY SSF52540 7 229 5.8E-67 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_01815 22a8ec260f376b3378fc121cf11f6ae5 977 Pfam PF00005 ABC transporter 27 175 2.0E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB29_03712 9fac4a2806e073736cad5c0c16868fed 46 Pfam PF12323 Helix-turn-helix domain 1 35 3.1E-13 T 14-10-2018 IPR021027 Transposase, putative, helix-turn-helix domain DB29_00470 e5f06e004d078a72a20bc1d39f0258a7 364 Pfam PF02445 Quinolinate synthetase A protein 24 362 1.9E-105 T 14-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 DB29_00470 e5f06e004d078a72a20bc1d39f0258a7 364 Gene3D G3DSA:3.40.50.10800 226 314 3.1E-84 T 14-10-2018 DB29_00470 e5f06e004d078a72a20bc1d39f0258a7 364 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 20 362 2.2E-107 T 14-10-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 DB29_00470 e5f06e004d078a72a20bc1d39f0258a7 364 Hamap MF_00569 Quinolinate synthase A [nadA]. 17 363 52.828 T 14-10-2018 IPR023515 Quinolinate synthase A, type 3 GO:0016765 MetaCyc: PWY-5316|MetaCyc: PWY-7342 DB29_00470 e5f06e004d078a72a20bc1d39f0258a7 364 SUPERFAMILY SSF142754 30 362 6.8E-95 T 14-10-2018 IPR036094 Quinolinate synthetase A superfamily GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 DB29_00470 e5f06e004d078a72a20bc1d39f0258a7 364 Gene3D G3DSA:3.40.50.10800 34 344 3.1E-84 T 14-10-2018 DB29_00470 e5f06e004d078a72a20bc1d39f0258a7 364 Gene3D G3DSA:3.40.50.10800 106 361 3.1E-84 T 14-10-2018 DB29_03328 a67030823bf1acb2dd7b3dfe39dedf45 109 SMART SM01061 1 59 7.3E-31 T 14-10-2018 IPR004341 CAT RNA-binding domain GO:0003723 DB29_03328 a67030823bf1acb2dd7b3dfe39dedf45 109 SUPERFAMILY SSF63520 58 106 3.4E-7 T 14-10-2018 IPR036634 PRD domain superfamily GO:0006355 DB29_03328 a67030823bf1acb2dd7b3dfe39dedf45 109 SUPERFAMILY SSF50151 1 53 7.19E-19 T 14-10-2018 IPR036650 CAT RNA-binding domain superfamily GO:0003723 DB29_03328 a67030823bf1acb2dd7b3dfe39dedf45 109 Gene3D G3DSA:1.10.1790.10 65 109 3.8E-7 T 14-10-2018 DB29_03328 a67030823bf1acb2dd7b3dfe39dedf45 109 Gene3D G3DSA:2.30.24.10 1 55 2.9E-25 T 14-10-2018 IPR036650 CAT RNA-binding domain superfamily GO:0003723 DB29_03328 a67030823bf1acb2dd7b3dfe39dedf45 109 Pfam PF03123 CAT RNA binding domain 1 53 2.2E-25 T 14-10-2018 IPR004341 CAT RNA-binding domain GO:0003723 DB29_00929 809bec38d987944be5ad2146838ddd90 405 SMART SM00116 343 389 1.3 T 14-10-2018 IPR000644 CBS domain DB29_00929 809bec38d987944be5ad2146838ddd90 405 SMART SM00116 281 330 2.0 T 14-10-2018 IPR000644 CBS domain DB29_00929 809bec38d987944be5ad2146838ddd90 405 Gene3D G3DSA:3.10.580.10 277 390 3.8E-13 T 14-10-2018 DB29_00929 809bec38d987944be5ad2146838ddd90 405 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 35 391 1.2E-145 T 14-10-2018 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 DB29_00929 809bec38d987944be5ad2146838ddd90 405 SUPERFAMILY SSF54631 273 390 1.07E-16 T 14-10-2018 DB29_00929 809bec38d987944be5ad2146838ddd90 405 SUPERFAMILY SSF52540 38 263 2.2E-75 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_00929 809bec38d987944be5ad2146838ddd90 405 Pfam PF00005 ABC transporter 44 191 1.9E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB29_00929 809bec38d987944be5ad2146838ddd90 405 Gene3D G3DSA:3.40.50.300 29 268 1.4E-71 T 14-10-2018 DB29_00929 809bec38d987944be5ad2146838ddd90 405 Pfam PF00571 CBS domain 339 389 0.0012 T 14-10-2018 IPR000644 CBS domain DB29_00929 809bec38d987944be5ad2146838ddd90 405 Pfam PF00571 CBS domain 279 329 4.5E-5 T 14-10-2018 IPR000644 CBS domain DB29_00929 809bec38d987944be5ad2146838ddd90 405 SMART SM00382 52 241 5.6E-21 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_00929 809bec38d987944be5ad2146838ddd90 405 ProSitePatterns PS00211 ABC transporters family signature. 164 178 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB29_00080 3aef18c1ee2fbfcab2da05b5c59701e1 419 Gene3D G3DSA:1.25.40.10 4 197 6.5E-24 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DB29_00080 3aef18c1ee2fbfcab2da05b5c59701e1 419 Pfam PF14559 Tetratricopeptide repeat 44 109 2.2E-7 T 14-10-2018 DB29_00080 3aef18c1ee2fbfcab2da05b5c59701e1 419 Pfam PF14559 Tetratricopeptide repeat 213 268 6.2E-8 T 14-10-2018 DB29_00080 3aef18c1ee2fbfcab2da05b5c59701e1 419 Gene3D G3DSA:1.25.40.10 198 271 1.9E-11 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DB29_00080 3aef18c1ee2fbfcab2da05b5c59701e1 419 Gene3D G3DSA:1.25.40.10 272 418 2.0E-19 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DB29_00080 3aef18c1ee2fbfcab2da05b5c59701e1 419 SUPERFAMILY SSF48452 30 338 6.07E-30 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DB29_00080 3aef18c1ee2fbfcab2da05b5c59701e1 419 Pfam PF13432 Tetratricopeptide repeat 121 163 0.0014 T 14-10-2018 DB29_00080 3aef18c1ee2fbfcab2da05b5c59701e1 419 SUPERFAMILY SSF48452 309 415 1.58E-9 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DB29_00080 3aef18c1ee2fbfcab2da05b5c59701e1 419 SMART SM00028 237 270 42.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DB29_00080 3aef18c1ee2fbfcab2da05b5c59701e1 419 SMART SM00028 32 65 4.1 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DB29_00080 3aef18c1ee2fbfcab2da05b5c59701e1 419 SMART SM00028 134 167 0.28 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DB29_00080 3aef18c1ee2fbfcab2da05b5c59701e1 419 SMART SM00028 373 406 1.7 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DB29_00080 3aef18c1ee2fbfcab2da05b5c59701e1 419 SMART SM00028 203 236 1.1 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DB29_00080 3aef18c1ee2fbfcab2da05b5c59701e1 419 SMART SM00028 100 133 490.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DB29_00080 3aef18c1ee2fbfcab2da05b5c59701e1 419 SMART SM00028 271 304 21.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DB29_00677 46f6df0ca7fb70a4d0dae6c8d7f6b499 106 Gene3D G3DSA:1.10.287.880 1 50 2.0E-20 T 14-10-2018 DB29_00677 46f6df0ca7fb70a4d0dae6c8d7f6b499 106 SUPERFAMILY SSF101697 1 102 1.96E-45 T 14-10-2018 IPR036289 Hypothetical protein YfhH DB29_00677 46f6df0ca7fb70a4d0dae6c8d7f6b499 106 Pfam PF08838 Protein of unknown function (DUF1811) 3 99 1.7E-38 T 14-10-2018 IPR014938 Protein of unknown function DUF1811 DB29_00677 46f6df0ca7fb70a4d0dae6c8d7f6b499 106 Gene3D G3DSA:2.30.30.340 51 103 1.8E-17 T 14-10-2018 DB29_00733 d05a17cc4138abbf95491079721f460d 312 Gene3D G3DSA:3.40.190.10 134 247 4.9E-67 T 14-10-2018 DB29_00733 d05a17cc4138abbf95491079721f460d 312 TIGRFAM TIGR01098 3A0109s03R: phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein 8 271 2.2E-63 T 14-10-2018 IPR005770 Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein GO:0043190|GO:0055085 DB29_00733 d05a17cc4138abbf95491079721f460d 312 Gene3D G3DSA:3.40.190.10 48 280 4.9E-67 T 14-10-2018 DB29_00733 d05a17cc4138abbf95491079721f460d 312 SMART SM00062 43 289 0.0029 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DB29_00733 d05a17cc4138abbf95491079721f460d 312 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 48 298 7.4E-64 T 14-10-2018 DB29_00733 d05a17cc4138abbf95491079721f460d 312 SUPERFAMILY SSF53850 42 310 1.75E-48 T 14-10-2018 DB29_03414 3ee73895a9afa298fb9cafc2e358065b 323 Gene3D G3DSA:3.40.50.12260 193 296 7.3E-90 T 14-10-2018 DB29_03414 3ee73895a9afa298fb9cafc2e358065b 323 SUPERFAMILY SSF53807 45 305 2.39E-63 T 14-10-2018 DB29_03414 3ee73895a9afa298fb9cafc2e358065b 323 Pfam PF01497 Periplasmic binding protein 64 296 4.1E-37 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain DB29_03414 3ee73895a9afa298fb9cafc2e358065b 323 Gene3D G3DSA:3.40.50.1980 55 313 7.3E-90 T 14-10-2018 DB29_03896 181a4930f2621fde70b719df3b86cb1a 159 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 3 155 1.9E-60 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 DB29_03896 181a4930f2621fde70b719df3b86cb1a 159 Pfam PF01467 Cytidylyltransferase-like 6 133 2.0E-17 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 DB29_03896 181a4930f2621fde70b719df3b86cb1a 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 20 41 3.0E-45 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 DB29_03896 181a4930f2621fde70b719df3b86cb1a 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 2 20 3.0E-45 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 DB29_03896 181a4930f2621fde70b719df3b86cb1a 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 49 73 3.0E-45 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 DB29_03896 181a4930f2621fde70b719df3b86cb1a 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 112 134 3.0E-45 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 DB29_03896 181a4930f2621fde70b719df3b86cb1a 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 85 101 3.0E-45 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 DB29_03896 181a4930f2621fde70b719df3b86cb1a 159 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 2 158 34.164 T 14-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 DB29_03896 181a4930f2621fde70b719df3b86cb1a 159 Gene3D G3DSA:3.40.50.620 1 159 1.3E-55 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DB29_03896 181a4930f2621fde70b719df3b86cb1a 159 SUPERFAMILY SSF52374 1 156 4.29E-43 T 14-10-2018 DB29_03896 181a4930f2621fde70b719df3b86cb1a 159 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 3 62 2.9E-15 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 DB29_03641 22e824af3336732a6fa6b45ba34ec75c 174 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 8 158 4.9E-21 T 14-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 DB29_03641 22e824af3336732a6fa6b45ba34ec75c 174 Pfam PF04093 rod shape-determining protein MreD 4 162 3.4E-28 T 14-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 DB29_00436 31c3b7e43cb567cd01f283acab80f061 209 Pfam PF13921 Myb-like DNA-binding domain 8 62 2.9E-5 T 14-10-2018 DB29_00436 31c3b7e43cb567cd01f283acab80f061 209 TIGRFAM TIGR02894 DNA_bind_RsfA: transcription factor, RsfA family 2 79 1.4E-43 T 14-10-2018 IPR014243 Transcription factor, RsfA DB29_02163 775d0a4a9b5ca1d643f084654f3e516c 282 Gene3D G3DSA:3.40.50.10170 1 155 3.1E-54 T 14-10-2018 DB29_02163 775d0a4a9b5ca1d643f084654f3e516c 282 SUPERFAMILY SSF82549 1 281 1.1E-85 T 14-10-2018 DB29_02163 775d0a4a9b5ca1d643f084654f3e516c 282 Pfam PF02645 Uncharacterised protein, DegV family COG1307 4 281 1.4E-89 T 14-10-2018 IPR003797 DegV DB29_02163 775d0a4a9b5ca1d643f084654f3e516c 282 Gene3D G3DSA:3.30.1180.10 156 281 1.4E-33 T 14-10-2018 DB29_02163 775d0a4a9b5ca1d643f084654f3e516c 282 TIGRFAM TIGR00762 DegV: EDD domain protein, DegV family 4 280 8.7E-96 T 14-10-2018 IPR003797 DegV DB29_03169 c8f7f78415a13a6d1c08742f8e52c905 301 Gene3D G3DSA:1.10.3720.10 57 298 1.4E-65 T 14-10-2018 IPR035906 MetI-like superfamily DB29_03169 c8f7f78415a13a6d1c08742f8e52c905 301 SUPERFAMILY SSF161098 61 289 9.81E-58 T 14-10-2018 IPR035906 MetI-like superfamily DB29_03169 c8f7f78415a13a6d1c08742f8e52c905 301 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 109 291 1.1E-6 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DB29_00191 9673d7eb15103084f655afe602b04b2f 305 Gene3D G3DSA:3.40.190.290 99 293 3.5E-55 T 14-10-2018 DB29_00191 9673d7eb15103084f655afe602b04b2f 305 SUPERFAMILY SSF46785 6 125 9.8E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_00191 9673d7eb15103084f655afe602b04b2f 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 25 77 2.3E-15 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DB29_00191 9673d7eb15103084f655afe602b04b2f 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 44 2.0E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DB29_00191 9673d7eb15103084f655afe602b04b2f 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 54 2.0E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DB29_00191 9673d7eb15103084f655afe602b04b2f 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 54 65 2.0E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DB29_00191 9673d7eb15103084f655afe602b04b2f 305 SUPERFAMILY SSF53850 101 298 2.53E-24 T 14-10-2018 DB29_00191 9673d7eb15103084f655afe602b04b2f 305 Gene3D G3DSA:1.10.10.10 21 98 6.1E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_00191 9673d7eb15103084f655afe602b04b2f 305 Pfam PF03466 LysR substrate binding domain 103 295 8.1E-26 T 14-10-2018 IPR005119 LysR, substrate-binding DB29_03145 89a99e6ce6f0a558cdb9f71a5dc81eb7 238 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 4.1E-22 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_03145 89a99e6ce6f0a558cdb9f71a5dc81eb7 238 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 4.1E-22 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_03145 89a99e6ce6f0a558cdb9f71a5dc81eb7 238 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 4.1E-22 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_03145 89a99e6ce6f0a558cdb9f71a5dc81eb7 238 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 4.1E-22 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_03145 89a99e6ce6f0a558cdb9f71a5dc81eb7 238 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 4.1E-22 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_03145 89a99e6ce6f0a558cdb9f71a5dc81eb7 238 Pfam PF00106 short chain dehydrogenase 4 194 1.7E-46 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_03145 89a99e6ce6f0a558cdb9f71a5dc81eb7 238 Gene3D G3DSA:3.40.50.720 2 212 2.0E-52 T 14-10-2018 DB29_03145 89a99e6ce6f0a558cdb9f71a5dc81eb7 238 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 DB29_03145 89a99e6ce6f0a558cdb9f71a5dc81eb7 238 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 1.5E-6 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_03145 89a99e6ce6f0a558cdb9f71a5dc81eb7 238 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 1.5E-6 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_03145 89a99e6ce6f0a558cdb9f71a5dc81eb7 238 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 1.5E-6 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_03145 89a99e6ce6f0a558cdb9f71a5dc81eb7 238 SUPERFAMILY SSF51735 4 197 9.39E-52 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_01722 8675d17f4877cb851ab78f3b34ca1078 354 SUPERFAMILY SSF52540 7 245 3.25E-80 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_01722 8675d17f4877cb851ab78f3b34ca1078 354 Gene3D G3DSA:2.40.50.140 269 324 1.3E-9 T 14-10-2018 DB29_01722 8675d17f4877cb851ab78f3b34ca1078 354 Gene3D G3DSA:3.40.50.300 1 241 2.7E-70 T 14-10-2018 DB29_01722 8675d17f4877cb851ab78f3b34ca1078 354 Pfam PF00005 ABC transporter 25 164 1.8E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB29_01722 8675d17f4877cb851ab78f3b34ca1078 354 Gene3D G3DSA:2.40.50.100 261 337 1.3E-9 T 14-10-2018 DB29_01722 8675d17f4877cb851ab78f3b34ca1078 354 SMART SM00382 31 222 1.0E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_01722 8675d17f4877cb851ab78f3b34ca1078 354 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB29_01722 8675d17f4877cb851ab78f3b34ca1078 354 Pfam PF08402 TOBE domain 262 332 1.7E-7 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 DB29_01722 8675d17f4877cb851ab78f3b34ca1078 354 SUPERFAMILY SSF50331 239 339 2.08E-17 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal DB29_02132 caeb7b608b7bebe550497a0d8e2b75e9 345 Pfam PF02615 Malate/L-lactate dehydrogenase 6 332 5.2E-125 T 14-10-2018 IPR003767 Malate/L-lactate dehydrogenase-like GO:0016491|GO:0055114 DB29_02132 caeb7b608b7bebe550497a0d8e2b75e9 345 SUPERFAMILY SSF89733 4 335 2.35E-116 T 14-10-2018 IPR036111 Malate/L-sulfolactate/L-lactate dehydrogenase-like superfamily GO:0016491|GO:0055114 DB29_02132 caeb7b608b7bebe550497a0d8e2b75e9 345 Gene3D G3DSA:1.10.1530.10 11 327 1.1E-123 T 14-10-2018 DB29_02132 caeb7b608b7bebe550497a0d8e2b75e9 345 Gene3D G3DSA:3.30.1370.60 69 307 1.1E-123 T 14-10-2018 DB29_01499 ca649ff3ab9ad06fd3c9bcd851afae66 893 Pfam PF00271 Helicase conserved C-terminal domain 455 561 8.2E-5 T 14-10-2018 IPR001650 Helicase, C-terminal DB29_01499 ca649ff3ab9ad06fd3c9bcd851afae66 893 SMART SM00487 10 223 1.5E-17 T 14-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain DB29_01499 ca649ff3ab9ad06fd3c9bcd851afae66 893 SUPERFAMILY SSF52540 9 201 4.46E-27 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_01499 ca649ff3ab9ad06fd3c9bcd851afae66 893 Gene3D G3DSA:3.40.50.300 438 588 2.5E-10 T 14-10-2018 DB29_01499 ca649ff3ab9ad06fd3c9bcd851afae66 893 SUPERFAMILY SSF52540 152 564 8.43E-16 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_01499 ca649ff3ab9ad06fd3c9bcd851afae66 893 Pfam PF04851 Type III restriction enzyme, res subunit 12 192 5.4E-18 T 14-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 DB29_01906 f24065985e67de35e1329fc24699187e 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 14-10-2018 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB29_01906 f24065985e67de35e1329fc24699187e 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 5.3E-66 T 14-10-2018 IPR023798 Ribosomal protein S7 domain DB29_01906 f24065985e67de35e1329fc24699187e 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 36.098 T 14-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 DB29_01906 f24065985e67de35e1329fc24699187e 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 156 3.0E-70 T 14-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 DB29_01906 f24065985e67de35e1329fc24699187e 156 PIRSF PIRSF002122 5 156 1.2E-58 T 14-10-2018 IPR000235 Ribosomal protein S5/S7 GO:0006412 DB29_01906 f24065985e67de35e1329fc24699187e 156 Gene3D G3DSA:1.10.455.10 2 156 7.6E-64 T 14-10-2018 IPR036823 Ribosomal protein S7 domain superfamily DB29_01906 f24065985e67de35e1329fc24699187e 156 SUPERFAMILY SSF47973 1 149 3.27E-61 T 14-10-2018 IPR036823 Ribosomal protein S7 domain superfamily DB29_02991 6bcb0a3104f62b0424a061d6885c9dcd 335 SUPERFAMILY SSF55347 126 304 9.97E-31 T 14-10-2018 DB29_02991 6bcb0a3104f62b0424a061d6885c9dcd 335 SUPERFAMILY SSF51735 12 150 1.11E-33 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_02991 6bcb0a3104f62b0424a061d6885c9dcd 335 Gene3D G3DSA:3.30.360.10 130 328 7.1E-40 T 14-10-2018 DB29_02991 6bcb0a3104f62b0424a061d6885c9dcd 335 Gene3D G3DSA:3.40.50.720 1 129 1.9E-26 T 14-10-2018 DB29_02991 6bcb0a3104f62b0424a061d6885c9dcd 335 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 23 118 2.4E-17 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 DB29_01297 b254d59c7eeeff9b360cb1a14a5e48d8 512 Pfam PF00367 phosphotransferase system, EIIB 439 471 7.1E-12 T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 DB29_01297 b254d59c7eeeff9b360cb1a14a5e48d8 512 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 412 495 1.8E-21 T 14-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 DB29_01297 b254d59c7eeeff9b360cb1a14a5e48d8 512 Pfam PF02378 Phosphotransferase system, EIIC 13 351 3.7E-92 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 DB29_01297 b254d59c7eeeff9b360cb1a14a5e48d8 512 SUPERFAMILY SSF55604 436 509 3.14E-20 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 DB29_01297 b254d59c7eeeff9b360cb1a14a5e48d8 512 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 449 466 - T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 DB29_01297 b254d59c7eeeff9b360cb1a14a5e48d8 512 Gene3D G3DSA:3.30.1360.60 432 512 2.6E-28 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 DB29_02548 c346a424f31668a95afd513036ae1dd8 422 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 17 418 1.1E-125 T 14-10-2018 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 DB29_02548 c346a424f31668a95afd513036ae1dd8 422 PIRSF PIRSF006351 1 422 1.6E-152 T 14-10-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 DB29_02548 c346a424f31668a95afd513036ae1dd8 422 Pfam PF02378 Phosphotransferase system, EIIC 29 344 1.9E-58 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 DB29_04318 0ad0304756e7b572ea0a8cd13834efd3 108 SUPERFAMILY SSF52833 2 98 8.34E-14 T 14-10-2018 IPR036249 Thioredoxin-like superfamily DB29_04318 0ad0304756e7b572ea0a8cd13834efd3 108 Pfam PF00085 Thioredoxin 17 88 6.6E-9 T 14-10-2018 IPR013766 Thioredoxin domain GO:0045454 DB29_04318 0ad0304756e7b572ea0a8cd13834efd3 108 Gene3D G3DSA:3.40.30.10 4 103 1.8E-12 T 14-10-2018 DB29_03854 9d944d2094b478df75ef718f01d188ee 338 Pfam PF00005 ABC transporter 27 183 6.5E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB29_03854 9d944d2094b478df75ef718f01d188ee 338 SUPERFAMILY SSF52540 36 312 1.3E-67 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_03854 9d944d2094b478df75ef718f01d188ee 338 ProSitePatterns PS00211 ABC transporters family signature. 156 170 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB29_03854 9d944d2094b478df75ef718f01d188ee 338 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 235 299 8.5E-23 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DB29_03854 9d944d2094b478df75ef718f01d188ee 338 Gene3D G3DSA:3.40.50.300 3 334 1.8E-97 T 14-10-2018 DB29_03854 9d944d2094b478df75ef718f01d188ee 338 SMART SM00382 35 233 1.2E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_03854 9d944d2094b478df75ef718f01d188ee 338 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 233 319 1.2E-26 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DB29_01117 031f6bd73243978625b5f28aefa31ce2 634 Pfam PF05043 Mga helix-turn-helix domain 82 161 9.5E-10 T 14-10-2018 IPR007737 Mga helix-turn-helix domain DB29_01117 031f6bd73243978625b5f28aefa31ce2 634 Gene3D G3DSA:1.10.1790.10 287 381 2.5E-12 T 14-10-2018 DB29_01117 031f6bd73243978625b5f28aefa31ce2 634 Pfam PF00874 PRD domain 296 378 4.9E-16 T 14-10-2018 IPR011608 PRD domain GO:0006355 DB29_01117 031f6bd73243978625b5f28aefa31ce2 634 SUPERFAMILY SSF46785 2 64 2.04E-5 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_01117 031f6bd73243978625b5f28aefa31ce2 634 SUPERFAMILY SSF52794 392 479 2.46E-9 T 14-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 DB29_01117 031f6bd73243978625b5f28aefa31ce2 634 Pfam PF08279 HTH domain 5 62 2.5E-6 T 14-10-2018 IPR013196 Helix-turn-helix, type 11 DB29_01117 031f6bd73243978625b5f28aefa31ce2 634 SUPERFAMILY SSF63520 288 381 1.96E-16 T 14-10-2018 IPR036634 PRD domain superfamily GO:0006355 DB29_01117 031f6bd73243978625b5f28aefa31ce2 634 Gene3D G3DSA:1.10.10.10 2 148 2.1E-11 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_01117 031f6bd73243978625b5f28aefa31ce2 634 Gene3D G3DSA:3.40.50.2300 391 481 7.0E-10 T 14-10-2018 DB29_01117 031f6bd73243978625b5f28aefa31ce2 634 SUPERFAMILY SSF55804 509 624 2.44E-20 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 DB29_01117 031f6bd73243978625b5f28aefa31ce2 634 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 503 624 2.7E-18 T 14-10-2018 IPR002178 PTS EIIA type-2 domain DB29_01117 031f6bd73243978625b5f28aefa31ce2 634 Gene3D G3DSA:3.40.930.10 504 627 5.3E-31 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 DB29_02263 3d215a134d0c17aa1c100e805b02243b 232 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 5 220 41.514 T 14-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 DB29_02263 3d215a134d0c17aa1c100e805b02243b 232 Pfam PF03167 Uracil DNA glycosylase superfamily 51 209 6.3E-26 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 DB29_02263 3d215a134d0c17aa1c100e805b02243b 232 SUPERFAMILY SSF52141 3 221 8.5E-94 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 DB29_02263 3d215a134d0c17aa1c100e805b02243b 232 Gene3D G3DSA:3.40.470.10 1 227 8.7E-100 T 14-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 DB29_02263 3d215a134d0c17aa1c100e805b02243b 232 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 6 213 3.6E-83 T 14-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 DB29_02263 3d215a134d0c17aa1c100e805b02243b 232 SMART SM00987 49 209 2.0E-36 T 14-10-2018 DB29_02263 3d215a134d0c17aa1c100e805b02243b 232 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 57 66 - T 14-10-2018 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 DB29_02263 3d215a134d0c17aa1c100e805b02243b 232 SMART SM00986 49 209 2.0E-36 T 14-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 DB29_00103 5ab63bff3635f6a38cde206744019a53 493 TIGRFAM TIGR02836 spore_IV_A: stage IV sporulation protein A 2 493 6.7E-264 T 14-10-2018 IPR014201 Sporulation stage IV, protein A GO:0005524|GO:0016887|GO:0043934 KEGG: 00230+3.6.1.3 DB29_00103 5ab63bff3635f6a38cde206744019a53 493 Pfam PF09547 Stage IV sporulation protein A (spore_IV_A) 3 493 7.3E-228 T 14-10-2018 IPR014201 Sporulation stage IV, protein A GO:0005524|GO:0016887|GO:0043934 KEGG: 00230+3.6.1.3 DB29_00103 5ab63bff3635f6a38cde206744019a53 493 PIRSF PIRSF007466 2 493 7.6E-268 T 14-10-2018 IPR014201 Sporulation stage IV, protein A GO:0005524|GO:0016887|GO:0043934 KEGG: 00230+3.6.1.3 DB29_00103 5ab63bff3635f6a38cde206744019a53 493 Gene3D G3DSA:3.40.50.300 21 236 2.8E-9 T 14-10-2018 DB29_00103 5ab63bff3635f6a38cde206744019a53 493 SUPERFAMILY SSF52540 20 242 7.71E-13 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_01266 5388ea4917cda43deb7265e5a04dd738 151 Pfam PF00583 Acetyltransferase (GNAT) family 25 116 3.3E-13 T 14-10-2018 IPR000182 GNAT domain DB29_01266 5388ea4917cda43deb7265e5a04dd738 151 SUPERFAMILY SSF55729 12 148 5.66E-28 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase DB29_01266 5388ea4917cda43deb7265e5a04dd738 151 Gene3D G3DSA:3.40.630.30 1 151 1.3E-43 T 14-10-2018 DB29_03596 3aa9280d29b0a0be8b7ee07e08add7f6 276 SUPERFAMILY SSF53681 108 260 8.99E-42 T 14-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 DB29_03596 3aa9280d29b0a0be8b7ee07e08add7f6 276 Hamap MF_00258 Glutamate racemase [murI]. 3 254 39.445 T 14-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 DB29_03596 3aa9280d29b0a0be8b7ee07e08add7f6 276 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 179 189 - T 14-10-2018 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 DB29_03596 3aa9280d29b0a0be8b7ee07e08add7f6 276 Gene3D G3DSA:3.40.50.1860 5 252 2.7E-94 T 14-10-2018 DB29_03596 3aa9280d29b0a0be8b7ee07e08add7f6 276 TIGRFAM TIGR00067 glut_race: glutamate racemase 5 251 8.6E-79 T 14-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 DB29_03596 3aa9280d29b0a0be8b7ee07e08add7f6 276 Gene3D G3DSA:3.40.50.1860 94 205 2.7E-94 T 14-10-2018 DB29_03596 3aa9280d29b0a0be8b7ee07e08add7f6 276 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 69 77 - T 14-10-2018 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 DB29_03596 3aa9280d29b0a0be8b7ee07e08add7f6 276 Pfam PF01177 Asp/Glu/Hydantoin racemase 5 213 4.0E-38 T 14-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 DB29_03596 3aa9280d29b0a0be8b7ee07e08add7f6 276 SUPERFAMILY SSF53681 4 105 1.47E-34 T 14-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 DB29_01217 4671b51836fb71bf5e3b528fc240bad7 805 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 64 116 1.4E-11 T 14-10-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DB29_01217 4671b51836fb71bf5e3b528fc240bad7 805 Pfam PF13244 Domain of unknown function (DUF4040) 639 702 2.2E-19 T 14-10-2018 IPR025383 Domain of unknown function DUF4040 DB29_01217 4671b51836fb71bf5e3b528fc240bad7 805 TIGRFAM TIGR00940 2a6301s01: monovalent cation:proton antiporter 6 797 0.0 T 14-10-2018 IPR005663 Monovalent cation proton antiporter subunit A GO:0015077|GO:0030004 DB29_01217 4671b51836fb71bf5e3b528fc240bad7 805 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 476 497 8.3E-5 T 14-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 DB29_01217 4671b51836fb71bf5e3b528fc240bad7 805 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 79 99 8.3E-5 T 14-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 DB29_01217 4671b51836fb71bf5e3b528fc240bad7 805 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 259 281 8.3E-5 T 14-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 DB29_01217 4671b51836fb71bf5e3b528fc240bad7 805 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 77 102 8.9E-47 T 14-10-2018 DB29_01217 4671b51836fb71bf5e3b528fc240bad7 805 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 241 267 8.9E-47 T 14-10-2018 DB29_01217 4671b51836fb71bf5e3b528fc240bad7 805 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 106 126 8.9E-47 T 14-10-2018 DB29_01217 4671b51836fb71bf5e3b528fc240bad7 805 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 438 457 8.9E-47 T 14-10-2018 DB29_01217 4671b51836fb71bf5e3b528fc240bad7 805 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 153 174 8.9E-47 T 14-10-2018 DB29_01217 4671b51836fb71bf5e3b528fc240bad7 805 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 219 240 8.9E-47 T 14-10-2018 DB29_01217 4671b51836fb71bf5e3b528fc240bad7 805 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 309 321 8.9E-47 T 14-10-2018 DB29_01217 4671b51836fb71bf5e3b528fc240bad7 805 Pfam PF00361 Proton-conducting membrane transporter 129 419 8.0E-66 T 14-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DB29_02316 c3104c90387ad94b7be15b7773422545 287 SUPERFAMILY SSF51569 1 287 1.05E-106 T 14-10-2018 DB29_02316 c3104c90387ad94b7be15b7773422545 287 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 74 87 - T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 DB29_02316 c3104c90387ad94b7be15b7773422545 287 TIGRFAM TIGR01859 fruc_bis_ald_: fructose-1,6-bisphosphate aldolase, class II 3 287 3.7E-130 T 14-10-2018 IPR011289 Fructose-1,6-bisphosphate aldolase, class 2 GO:0004332|GO:0006096|GO:0008270|GO:0030388 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385 DB29_02316 c3104c90387ad94b7be15b7773422545 287 Pfam PF01116 Fructose-bisphosphate aldolase class-II 4 286 6.2E-106 T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 DB29_02316 c3104c90387ad94b7be15b7773422545 287 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 134 145 - T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 DB29_02316 c3104c90387ad94b7be15b7773422545 287 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 287 1.2E-115 T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 DB29_02316 c3104c90387ad94b7be15b7773422545 287 PIRSF PIRSF001359 1 287 2.0E-129 T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 DB29_02316 c3104c90387ad94b7be15b7773422545 287 Gene3D G3DSA:3.20.20.70 1 287 7.9E-117 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DB29_03594 81b218577aa9e3d7b7bddcc06911d202 573 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 448 466 - T 14-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 DB29_03594 81b218577aa9e3d7b7bddcc06911d202 573 Gene3D G3DSA:3.20.20.60 235 573 2.0E-130 T 14-10-2018 DB29_03594 81b218577aa9e3d7b7bddcc06911d202 573 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 448 463 3.8E-32 T 14-10-2018 DB29_03594 81b218577aa9e3d7b7bddcc06911d202 573 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 294 313 3.8E-32 T 14-10-2018 DB29_03594 81b218577aa9e3d7b7bddcc06911d202 573 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 465 480 3.8E-32 T 14-10-2018 DB29_03594 81b218577aa9e3d7b7bddcc06911d202 573 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 501 513 3.8E-32 T 14-10-2018 DB29_03594 81b218577aa9e3d7b7bddcc06911d202 573 SUPERFAMILY SSF47831 24 144 8.11E-37 T 14-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 DB29_03594 81b218577aa9e3d7b7bddcc06911d202 573 Gene3D G3DSA:3.50.30.10 7 234 1.5E-80 T 14-10-2018 DB29_03594 81b218577aa9e3d7b7bddcc06911d202 573 SUPERFAMILY SSF52009 126 246 2.75E-38 T 14-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 DB29_03594 81b218577aa9e3d7b7bddcc06911d202 573 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 185 196 - T 14-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 DB29_03594 81b218577aa9e3d7b7bddcc06911d202 573 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 251 541 9.1E-131 T 14-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 DB29_03594 81b218577aa9e3d7b7bddcc06911d202 573 Pfam PF00391 PEP-utilising enzyme, mobile domain 153 226 8.0E-23 T 14-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 DB29_03594 81b218577aa9e3d7b7bddcc06911d202 573 Pfam PF05524 PEP-utilising enzyme, N-terminal 6 127 1.4E-33 T 14-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 DB29_03594 81b218577aa9e3d7b7bddcc06911d202 573 SUPERFAMILY SSF51621 250 550 6.28E-116 T 14-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 DB29_03594 81b218577aa9e3d7b7bddcc06911d202 573 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 5 566 3.9E-247 T 14-10-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 DB29_03594 81b218577aa9e3d7b7bddcc06911d202 573 PIRSF PIRSF000732 1 573 1.1E-229 T 14-10-2018 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 DB29_03594 81b218577aa9e3d7b7bddcc06911d202 573 Gene3D G3DSA:1.10.274.10 24 147 1.5E-80 T 14-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 DB29_00262 8495b601b999cb8278b03c04f2e69aeb 353 Gene3D G3DSA:3.30.70.930 245 350 7.1E-33 T 14-10-2018 IPR029756 MTH1187/YkoF-like DB29_00262 8495b601b999cb8278b03c04f2e69aeb 353 Pfam PF01910 Thiamine-binding protein 252 347 2.7E-31 T 14-10-2018 IPR002767 Thiamine-binding protein DB29_00262 8495b601b999cb8278b03c04f2e69aeb 353 TIGRFAM TIGR00106 TIGR00106: uncharacterized protein, MTH1187 family 250 349 1.8E-31 T 14-10-2018 IPR002767 Thiamine-binding protein DB29_00262 8495b601b999cb8278b03c04f2e69aeb 353 SUPERFAMILY SSF89957 249 349 7.85E-28 T 14-10-2018 IPR029756 MTH1187/YkoF-like DB29_00262 8495b601b999cb8278b03c04f2e69aeb 353 Pfam PF07136 Protein of unknown function (DUF1385) 59 226 1.0E-13 T 14-10-2018 IPR010787 Protein of unknown function DUF1385 DB29_01892 435802c2acc3f717d826441bcfef36c6 122 SUPERFAMILY SSF50193 1 122 1.83E-50 T 14-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 DB29_01892 435802c2acc3f717d826441bcfef36c6 122 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 122 3.5E-58 T 14-10-2018 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 DB29_01892 435802c2acc3f717d826441bcfef36c6 122 Pfam PF00238 Ribosomal protein L14p/L23e 1 122 1.6E-54 T 14-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 DB29_01892 435802c2acc3f717d826441bcfef36c6 122 Gene3D G3DSA:2.40.150.20 1 122 1.0E-53 T 14-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 DB29_01892 435802c2acc3f717d826441bcfef36c6 122 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 14-10-2018 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB29_01892 435802c2acc3f717d826441bcfef36c6 122 SMART SM01374 1 122 2.8E-85 T 14-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 DB29_01892 435802c2acc3f717d826441bcfef36c6 122 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 122 26.624 T 14-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 DB29_01008 39a8ddddf516e21d3738dbf9313088b1 229 Gene3D G3DSA:3.40.50.10420 41 227 6.0E-38 T 14-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily DB29_01008 39a8ddddf516e21d3738dbf9313088b1 229 Pfam PF02589 LUD domain 52 226 4.6E-31 T 14-10-2018 IPR003741 LUD domain DB29_01008 39a8ddddf516e21d3738dbf9313088b1 229 SUPERFAMILY SSF100950 43 227 1.13E-40 T 14-10-2018 IPR037171 NagB/RpiA transferase-like DB29_01008 39a8ddddf516e21d3738dbf9313088b1 229 Hamap MF_02104 Lactate utilization protein C [lutC]. 1 226 48.022 T 14-10-2018 IPR022823 Lactate utilization protein C DB29_01588 9c0484c99e4916702ed96a85f3804e3e 431 Pfam PF03600 Citrate transporter 17 374 4.4E-46 T 14-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 DB29_01588 9c0484c99e4916702ed96a85f3804e3e 431 TIGRFAM TIGR00784 citMHS: citrate transporter 1 429 5.1E-154 T 14-10-2018 IPR014738 Citrate transporter GO:0015137|GO:0015746 DB29_01127 6b96e9dff843297467cee22d4c0c96ff 269 Pfam PF00902 Sec-independent protein translocase protein (TatC) 29 237 6.7E-56 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 DB29_01127 6b96e9dff843297467cee22d4c0c96ff 269 ProSitePatterns PS01218 TatC family signature. 170 189 - T 14-10-2018 IPR019820 Sec-independent periplasmic protein translocase, conserved site DB29_01127 6b96e9dff843297467cee22d4c0c96ff 269 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 16 255 16.116 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 DB29_01127 6b96e9dff843297467cee22d4c0c96ff 269 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 27 242 1.8E-67 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 DB29_01127 6b96e9dff843297467cee22d4c0c96ff 269 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 100 118 2.6E-39 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 DB29_01127 6b96e9dff843297467cee22d4c0c96ff 269 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 170 198 2.6E-39 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 DB29_01127 6b96e9dff843297467cee22d4c0c96ff 269 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 26 53 2.6E-39 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 DB29_01127 6b96e9dff843297467cee22d4c0c96ff 269 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 118 144 2.6E-39 T 14-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 DB29_03022 7b6abdc60ba097303c7ed7fb1829c1c7 522 Pfam PF13193 AMP-binding enzyme C-terminal domain 432 510 8.2E-23 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain DB29_03022 7b6abdc60ba097303c7ed7fb1829c1c7 522 Gene3D G3DSA:3.30.300.310 419 522 4.5E-28 T 14-10-2018 DB29_03022 7b6abdc60ba097303c7ed7fb1829c1c7 522 Pfam PF00501 AMP-binding enzyme 27 423 4.5E-78 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 DB29_03022 7b6abdc60ba097303c7ed7fb1829c1c7 522 SUPERFAMILY SSF56801 23 519 1.09E-135 T 14-10-2018 DB29_03022 7b6abdc60ba097303c7ed7fb1829c1c7 522 ProSitePatterns PS00455 Putative AMP-binding domain signature. 175 186 - T 14-10-2018 IPR020845 AMP-binding, conserved site DB29_03022 7b6abdc60ba097303c7ed7fb1829c1c7 522 Gene3D G3DSA:3.40.50.12780 2 417 5.9E-111 T 14-10-2018 DB29_04150 8044333bc254a81accc48d1cde19a92e 350 TIGRFAM TIGR01432 QOXA: cytochrome aa3 quinol oxidase, subunit II 37 264 4.9E-106 T 14-10-2018 IPR006332 Quinol oxidase subunit II GO:0009486|GO:0016021|GO:0016682|GO:0055114 DB29_04150 8044333bc254a81accc48d1cde19a92e 350 SUPERFAMILY SSF49503 149 305 5.42E-43 T 14-10-2018 IPR008972 Cupredoxin DB29_04150 8044333bc254a81accc48d1cde19a92e 350 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 173 242 3.0E-5 T 14-10-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DB29_04150 8044333bc254a81accc48d1cde19a92e 350 Pfam PF02790 Cytochrome C oxidase subunit II, transmembrane domain 54 130 4.5E-11 T 14-10-2018 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DB29_04150 8044333bc254a81accc48d1cde19a92e 350 SUPERFAMILY SSF81464 40 139 1.03E-25 T 14-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DB29_04150 8044333bc254a81accc48d1cde19a92e 350 PIRSF PIRSF000292 24 335 1.3E-112 T 14-10-2018 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 DB29_04150 8044333bc254a81accc48d1cde19a92e 350 Gene3D G3DSA:1.10.287.90 51 136 1.7E-30 T 14-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DB29_04150 8044333bc254a81accc48d1cde19a92e 350 PRINTS PR01166 Cytochrome c oxidase subunit II signature 215 232 2.3E-8 T 14-10-2018 DB29_04150 8044333bc254a81accc48d1cde19a92e 350 PRINTS PR01166 Cytochrome c oxidase subunit II signature 107 119 2.3E-8 T 14-10-2018 DB29_04150 8044333bc254a81accc48d1cde19a92e 350 PRINTS PR01166 Cytochrome c oxidase subunit II signature 119 139 2.3E-8 T 14-10-2018 DB29_04150 8044333bc254a81accc48d1cde19a92e 350 PRINTS PR01166 Cytochrome c oxidase subunit II signature 195 215 2.3E-8 T 14-10-2018 DB29_04150 8044333bc254a81accc48d1cde19a92e 350 Gene3D G3DSA:2.60.40.420 137 301 1.7E-41 T 14-10-2018 IPR008972 Cupredoxin DB29_01248 44726cd8254e610144b7475a49377b03 337 Pfam PF13303 Phosphotransferase system, EIIC 10 333 1.7E-96 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 DB29_00487 c30fd5a224351b22747de83f6649cd4e 236 ProDom PD038378 ECSC YDBA CC1715 BH1193 ECSC-LIKE ESCC 2 232 4.0E-120 T 14-10-2018 DB29_00487 c30fd5a224351b22747de83f6649cd4e 236 Pfam PF12787 EcsC protein family 6 230 1.9E-65 T 14-10-2018 IPR024787 EcsC protein DB29_00336 5a384d90765bd31c1a211957b261584c 57 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 16 43 2.0E-8 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB29_00336 5a384d90765bd31c1a211957b261584c 57 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 6.2E-15 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB29_00336 5a384d90765bd31c1a211957b261584c 57 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 6.2E-15 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB29_00336 5a384d90765bd31c1a211957b261584c 57 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 6.2E-15 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB29_00336 5a384d90765bd31c1a211957b261584c 57 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 6.2E-15 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB29_00336 5a384d90765bd31c1a211957b261584c 57 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 3 56 1.7E-21 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB29_00336 5a384d90765bd31c1a211957b261584c 57 Pfam PF01165 Ribosomal protein S21 5 57 1.7E-20 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB29_00336 5a384d90765bd31c1a211957b261584c 57 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 14-10-2018 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 DB29_00336 5a384d90765bd31c1a211957b261584c 57 Gene3D G3DSA:1.20.5.1150 16 56 3.6E-16 T 14-10-2018 IPR038380 Ribosomal protein S21 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB29_00336 5a384d90765bd31c1a211957b261584c 57 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 21.359 T 14-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB29_00026 bbdd3c2abcc9db128e6c7e9205fb17cd 260 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 28 37 - T 14-10-2018 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 DB29_00026 bbdd3c2abcc9db128e6c7e9205fb17cd 260 ProSitePatterns PS00727 AP endonucleases family 1 signature 2. 184 200 - T 14-10-2018 IPR020848 AP endonuclease 1, conserved site GO:0003677|GO:0004519|GO:0005622|GO:0006281 Reactome: R-HSA-110357|Reactome: R-HSA-110362|Reactome: R-HSA-110373|Reactome: R-HSA-5651801|Reactome: R-HSA-73930|Reactome: R-HSA-73933 DB29_00026 bbdd3c2abcc9db128e6c7e9205fb17cd 260 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 4 242 2.5E-23 T 14-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase DB29_00026 bbdd3c2abcc9db128e6c7e9205fb17cd 260 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 248 1.5E-88 T 14-10-2018 DB29_00026 bbdd3c2abcc9db128e6c7e9205fb17cd 260 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 249 5.5E-95 T 14-10-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 DB29_00026 bbdd3c2abcc9db128e6c7e9205fb17cd 260 ProSitePatterns PS00728 AP endonucleases family 1 signature 3. 210 221 - T 14-10-2018 IPR020848 AP endonuclease 1, conserved site GO:0003677|GO:0004519|GO:0005622|GO:0006281 Reactome: R-HSA-110357|Reactome: R-HSA-110362|Reactome: R-HSA-110373|Reactome: R-HSA-5651801|Reactome: R-HSA-73930|Reactome: R-HSA-73933 DB29_00026 bbdd3c2abcc9db128e6c7e9205fb17cd 260 SUPERFAMILY SSF56219 1 251 6.02E-79 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily DB29_00026 bbdd3c2abcc9db128e6c7e9205fb17cd 260 Gene3D G3DSA:3.60.10.10 1 250 1.2E-92 T 14-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily DB29_01817 2b617e41c65187c6dcec0bc9a24eab25 145 SMART SM00966 83 130 1.3E-6 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 DB29_01817 2b617e41c65187c6dcec0bc9a24eab25 145 TIGRFAM TIGR01439 lp_hng_hel_AbrB: transcriptional regulator, AbrB family 83 116 7.8E-10 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 DB29_01817 2b617e41c65187c6dcec0bc9a24eab25 145 Gene3D G3DSA:1.10.260.40 1 62 1.1E-21 T 14-10-2018 DB29_01817 2b617e41c65187c6dcec0bc9a24eab25 145 Gene3D G3DSA:2.10.260.10 81 122 8.0E-9 T 14-10-2018 DB29_01817 2b617e41c65187c6dcec0bc9a24eab25 145 SUPERFAMILY SSF47413 1 66 1.53E-16 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DB29_01817 2b617e41c65187c6dcec0bc9a24eab25 145 SUPERFAMILY SSF89447 79 127 3.66E-9 T 14-10-2018 IPR037914 SpoVT-AbrB domain superfamily DB29_01817 2b617e41c65187c6dcec0bc9a24eab25 145 Pfam PF01381 Helix-turn-helix 6 60 5.3E-14 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DB29_01817 2b617e41c65187c6dcec0bc9a24eab25 145 SMART SM00530 5 60 4.1E-15 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DB29_02829 a3c157615e94c4597cf37d51dd54b75b 403 SUPERFAMILY SSF46785 4 67 1.43E-13 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_02829 a3c157615e94c4597cf37d51dd54b75b 403 Gene3D G3DSA:1.10.10.10 5 70 5.4E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_02829 a3c157615e94c4597cf37d51dd54b75b 403 ProSitePatterns PS01125 ROK family signature. 206 233 - T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 DB29_02829 a3c157615e94c4597cf37d51dd54b75b 403 Gene3D G3DSA:3.30.420.40 197 371 4.2E-77 T 14-10-2018 DB29_02829 a3c157615e94c4597cf37d51dd54b75b 403 Gene3D G3DSA:3.30.420.40 83 380 4.2E-77 T 14-10-2018 DB29_02829 a3c157615e94c4597cf37d51dd54b75b 403 Pfam PF00480 ROK family 85 385 3.3E-52 T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 DB29_02829 a3c157615e94c4597cf37d51dd54b75b 403 SUPERFAMILY SSF53067 76 386 2.99E-49 T 14-10-2018 DB29_02700 72d04b3420e01ea6c3a6351fb2bfe219 224 Gene3D G3DSA:1.10.10.10 128 224 2.8E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_02700 72d04b3420e01ea6c3a6351fb2bfe219 224 SMART SM00862 147 223 2.1E-17 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DB29_02700 72d04b3420e01ea6c3a6351fb2bfe219 224 Pfam PF00072 Response regulator receiver domain 4 113 6.6E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DB29_02700 72d04b3420e01ea6c3a6351fb2bfe219 224 Gene3D G3DSA:3.40.50.2300 1 127 2.7E-38 T 14-10-2018 DB29_02700 72d04b3420e01ea6c3a6351fb2bfe219 224 SMART SM00448 2 112 2.1E-38 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DB29_02700 72d04b3420e01ea6c3a6351fb2bfe219 224 SUPERFAMILY SSF52172 2 180 1.71E-40 T 14-10-2018 IPR011006 CheY-like superfamily DB29_02700 72d04b3420e01ea6c3a6351fb2bfe219 224 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 223 1.1E-20 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DB29_00210 f297a8f5f7f0e158bc7cb646096ae87d 137 Gene3D G3DSA:3.30.300.20 43 134 1.5E-33 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta DB29_00210 f297a8f5f7f0e158bc7cb646096ae87d 137 SUPERFAMILY SSF82784 5 133 3.01E-37 T 14-10-2018 IPR036102 OsmC/Ohr superfamily DB29_00210 f297a8f5f7f0e158bc7cb646096ae87d 137 Gene3D G3DSA:2.20.25.10 4 42 7.2E-18 T 14-10-2018 DB29_00210 f297a8f5f7f0e158bc7cb646096ae87d 137 TIGRFAM TIGR03561 organ_hyd_perox: peroxiredoxin, Ohr subfamily 5 133 5.8E-51 T 14-10-2018 IPR019953 Organic hydroperoxide resistance protein famiy GO:0006979 DB29_00210 f297a8f5f7f0e158bc7cb646096ae87d 137 Pfam PF02566 OsmC-like protein 38 132 4.9E-17 T 14-10-2018 IPR003718 OsmC/Ohr family DB29_03123 f2899ca92aac6288ec5cb6bd6b8a490d 435 Pfam PF04740 LXG domain of WXG superfamily 1 105 7.6E-26 T 14-10-2018 IPR006829 LXG domain DB29_03782 fe65c47357e549be5558f59d81c64df8 164 ProDom PD101610 MEMBRANE YQHR BH2802 TRANSMEMBRANE IG 12 161 8.0E-72 T 14-10-2018 IPR024563 Uncharacterised protein family YqhR DB29_03782 fe65c47357e549be5558f59d81c64df8 164 Pfam PF11085 Conserved membrane protein YqhR 8 162 1.2E-64 T 14-10-2018 IPR024563 Uncharacterised protein family YqhR DB29_01463 94712f92cb68f77251be78351559312e 296 SUPERFAMILY SSF161098 89 277 3.27E-30 T 14-10-2018 IPR035906 MetI-like superfamily DB29_01463 94712f92cb68f77251be78351559312e 296 Gene3D G3DSA:1.10.3720.10 83 292 5.7E-23 T 14-10-2018 IPR035906 MetI-like superfamily DB29_01463 94712f92cb68f77251be78351559312e 296 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 295 5.3E-29 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DB29_01463 94712f92cb68f77251be78351559312e 296 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 23 69 2.4E-10 T 14-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain DB29_04160 e956f33193c30a890e115cb028ca05d0 237 SUPERFAMILY SSF102114 27 112 2.88E-17 T 14-10-2018 DB29_04160 e956f33193c30a890e115cb028ca05d0 237 TIGRFAM TIGR03365 Bsubt_queE: 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE 5 237 7.9E-108 T 14-10-2018 IPR017742 7-carboxy-7-deazaguanine synthase KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 DB29_04160 e956f33193c30a890e115cb028ca05d0 237 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 5 234 37.459 T 14-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 DB29_04160 e956f33193c30a890e115cb028ca05d0 237 Pfam PF13394 4Fe-4S single cluster domain 27 110 2.7E-10 T 14-10-2018 DB29_04160 e956f33193c30a890e115cb028ca05d0 237 Pfam PF04055 Radical SAM superfamily 29 121 1.1E-13 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 DB29_04160 e956f33193c30a890e115cb028ca05d0 237 PIRSF PIRSF000370 3 237 2.9E-54 T 14-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 DB29_04160 e956f33193c30a890e115cb028ca05d0 237 Gene3D G3DSA:3.20.20.70 5 231 7.4E-33 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DB29_03740 30542fa2f847002f40de4bd673f6e51c 187 Gene3D G3DSA:2.40.320.10 1 186 3.3E-47 T 14-10-2018 DB29_03740 30542fa2f847002f40de4bd673f6e51c 187 Pfam PF01928 CYTH domain 4 182 3.0E-24 T 14-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 DB29_03740 30542fa2f847002f40de4bd673f6e51c 187 PIRSF PIRSF012526 1 187 3.7E-55 T 14-10-2018 IPR009195 Uncharacterised protein family YjbK DB29_03740 30542fa2f847002f40de4bd673f6e51c 187 SUPERFAMILY SSF55154 5 185 2.94E-28 T 14-10-2018 IPR033469 CYTH-like domain superfamily Reactome: R-HSA-196819 DB29_03740 30542fa2f847002f40de4bd673f6e51c 187 SMART SM01118 4 185 2.1E-22 T 14-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 DB29_00570 63f3998ee2ded8ee1d84fe71676e4f01 349 Gene3D G3DSA:2.40.30.40 78 172 3.5E-118 T 14-10-2018 IPR023367 Peptidase M42, domain 2 DB29_00570 63f3998ee2ded8ee1d84fe71676e4f01 349 PIRSF PIRSF001123 7 344 3.7E-36 T 14-10-2018 IPR008007 Peptidase M42 DB29_00570 63f3998ee2ded8ee1d84fe71676e4f01 349 SUPERFAMILY SSF53187 9 344 1.28E-53 T 14-10-2018 DB29_00570 63f3998ee2ded8ee1d84fe71676e4f01 349 Gene3D G3DSA:3.40.630.10 16 342 3.5E-118 T 14-10-2018 DB29_00570 63f3998ee2ded8ee1d84fe71676e4f01 349 SUPERFAMILY SSF101821 75 187 2.9E-29 T 14-10-2018 DB29_00570 63f3998ee2ded8ee1d84fe71676e4f01 349 Pfam PF05343 M42 glutamyl aminopeptidase 50 338 1.7E-82 T 14-10-2018 IPR008007 Peptidase M42 DB29_01438 f007c7206a9d17bafca14193579fffca 545 ProSitePatterns PS00455 Putative AMP-binding domain signature. 194 205 - T 14-10-2018 IPR020845 AMP-binding, conserved site DB29_01438 f007c7206a9d17bafca14193579fffca 545 Gene3D G3DSA:3.40.50.12780 2 434 3.6E-122 T 14-10-2018 DB29_01438 f007c7206a9d17bafca14193579fffca 545 Pfam PF00501 AMP-binding enzyme 13 444 1.7E-109 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 DB29_01438 f007c7206a9d17bafca14193579fffca 545 Gene3D G3DSA:3.30.300.310 440 544 5.1E-33 T 14-10-2018 DB29_01438 f007c7206a9d17bafca14193579fffca 545 Pfam PF13193 AMP-binding enzyme C-terminal domain 453 528 1.8E-16 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain DB29_01438 f007c7206a9d17bafca14193579fffca 545 SUPERFAMILY SSF56801 6 539 9.16E-158 T 14-10-2018 DB29_03774 54ba27485d7e2e3bb822bd5ac5bf2abd 127 SUPERFAMILY SSF52821 10 122 8.77E-32 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily DB29_03774 54ba27485d7e2e3bb822bd5ac5bf2abd 127 SMART SM00450 30 126 3.6E-25 T 14-10-2018 IPR001763 Rhodanese-like domain DB29_03774 54ba27485d7e2e3bb822bd5ac5bf2abd 127 Gene3D G3DSA:3.40.250.10 33 127 1.5E-27 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily DB29_03774 54ba27485d7e2e3bb822bd5ac5bf2abd 127 Pfam PF00581 Rhodanese-like domain 39 121 1.8E-19 T 14-10-2018 IPR001763 Rhodanese-like domain DB29_00357 d39bc5ec0eff84e9e5d20a0c24567eaa 340 SUPERFAMILY SSF52540 5 215 2.75E-30 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_00357 d39bc5ec0eff84e9e5d20a0c24567eaa 340 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 16 338 1.3E-82 T 14-10-2018 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 DB29_00357 d39bc5ec0eff84e9e5d20a0c24567eaa 340 Gene3D G3DSA:1.20.272.10 217 340 2.2E-37 T 14-10-2018 DB29_00357 d39bc5ec0eff84e9e5d20a0c24567eaa 340 Gene3D G3DSA:1.10.8.60 149 216 2.7E-11 T 14-10-2018 DB29_00357 d39bc5ec0eff84e9e5d20a0c24567eaa 340 Pfam PF06144 DNA polymerase III, delta subunit 19 193 2.4E-37 T 14-10-2018 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 DB29_00357 d39bc5ec0eff84e9e5d20a0c24567eaa 340 SUPERFAMILY SSF48019 218 338 1.19E-28 T 14-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 DB29_00357 d39bc5ec0eff84e9e5d20a0c24567eaa 340 Gene3D G3DSA:3.40.50.300 5 143 2.2E-37 T 14-10-2018 DB29_03653 8bd03c1ff7bb428a9a4a7d8d28d9171a 92 TIGRFAM TIGR00062 L27: ribosomal protein bL27 9 89 9.1E-40 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB29_03653 8bd03c1ff7bb428a9a4a7d8d28d9171a 92 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 36 77 4.0E-17 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB29_03653 8bd03c1ff7bb428a9a4a7d8d28d9171a 92 PRINTS PR00063 Ribosomal protein L27 signature 12 36 8.9E-39 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB29_03653 8bd03c1ff7bb428a9a4a7d8d28d9171a 92 PRINTS PR00063 Ribosomal protein L27 signature 37 61 8.9E-39 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB29_03653 8bd03c1ff7bb428a9a4a7d8d28d9171a 92 PRINTS PR00063 Ribosomal protein L27 signature 62 86 8.9E-39 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB29_03653 8bd03c1ff7bb428a9a4a7d8d28d9171a 92 Gene3D G3DSA:2.40.50.100 28 92 1.9E-25 T 14-10-2018 DB29_03653 8bd03c1ff7bb428a9a4a7d8d28d9171a 92 ProSitePatterns PS00831 Ribosomal protein L27 signature. 42 56 - T 14-10-2018 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 DB29_03653 8bd03c1ff7bb428a9a4a7d8d28d9171a 92 SUPERFAMILY SSF110324 10 91 2.02E-31 T 14-10-2018 DB29_03653 8bd03c1ff7bb428a9a4a7d8d28d9171a 92 Pfam PF01016 Ribosomal L27 protein 10 89 7.2E-34 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB29_03653 8bd03c1ff7bb428a9a4a7d8d28d9171a 92 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 9 92 27.157 T 14-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB29_03900 10786abe5a0a3e1a4247bec575e5ccf9 405 Hamap MF_01539 UPF0348 protein . 2 400 39.327 T 14-10-2018 IPR008513 Uncharacterised protein family UPF0348 DB29_03900 10786abe5a0a3e1a4247bec575e5ccf9 405 Pfam PF05636 HIGH Nucleotidyl Transferase 3 379 2.0E-126 T 14-10-2018 IPR008513 Uncharacterised protein family UPF0348 DB29_03900 10786abe5a0a3e1a4247bec575e5ccf9 405 Gene3D G3DSA:3.40.50.620 1 238 6.1E-39 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DB29_03900 10786abe5a0a3e1a4247bec575e5ccf9 405 SUPERFAMILY SSF52374 9 233 2.53E-23 T 14-10-2018 DB29_00363 58f31de1883321df18bdfec00d78c41f 246 SUPERFAMILY SSF53335 3 245 1.04E-49 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DB29_00363 58f31de1883321df18bdfec00d78c41f 246 Gene3D G3DSA:2.20.25.110 143 204 1.9E-76 T 14-10-2018 DB29_00363 58f31de1883321df18bdfec00d78c41f 246 Gene3D G3DSA:3.40.50.150 9 243 1.9E-76 T 14-10-2018 DB29_00363 58f31de1883321df18bdfec00d78c41f 246 Pfam PF13649 Methyltransferase domain 40 135 4.3E-20 T 14-10-2018 DB29_04305 fd501b57efed089e68522b7a9b96c082 1195 Pfam PF00350 Dynamin family 613 835 3.3E-38 T 14-10-2018 IPR022812 Dynamin superfamily DB29_04305 fd501b57efed089e68522b7a9b96c082 1195 Pfam PF00350 Dynamin family 32 185 4.0E-25 T 14-10-2018 IPR022812 Dynamin superfamily DB29_04305 fd501b57efed089e68522b7a9b96c082 1195 Gene3D G3DSA:3.40.50.300 31 266 1.6E-37 T 14-10-2018 DB29_04305 fd501b57efed089e68522b7a9b96c082 1195 SUPERFAMILY SSF52540 595 898 1.56E-29 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_04305 fd501b57efed089e68522b7a9b96c082 1195 SUPERFAMILY SSF52540 27 236 6.18E-31 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_00990 74db8c82b9d3334981bcc508fd1f9569 472 Hamap MF_00675 Uronate isomerase [uxaC]. 6 470 50.173 T 14-10-2018 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248 DB29_00990 74db8c82b9d3334981bcc508fd1f9569 472 SUPERFAMILY SSF51556 6 468 7.71E-184 T 14-10-2018 IPR032466 Metal-dependent hydrolase DB29_00990 74db8c82b9d3334981bcc508fd1f9569 472 Pfam PF02614 Glucuronate isomerase 6 468 3.4E-219 T 14-10-2018 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248 DB29_00990 74db8c82b9d3334981bcc508fd1f9569 472 Gene3D G3DSA:3.20.20.140 11 468 1.7E-198 T 14-10-2018 DB29_00990 74db8c82b9d3334981bcc508fd1f9569 472 Gene3D G3DSA:1.10.2020.10 50 140 1.7E-198 T 14-10-2018 DB29_02243 16338d25d3d1bf106de7937c261a1656 485 Pfam PF01145 SPFH domain / Band 7 family 30 219 5.5E-24 T 14-10-2018 IPR001107 Band 7 domain DB29_02243 16338d25d3d1bf106de7937c261a1656 485 SUPERFAMILY SSF117892 68 210 4.45E-34 T 14-10-2018 IPR036013 Band 7/SPFH domain superfamily DB29_02243 16338d25d3d1bf106de7937c261a1656 485 Pfam PF15975 Flotillin 368 454 6.2E-15 T 14-10-2018 IPR031905 Flotillin, C-terminal domain Reactome: R-HSA-8849932 DB29_02243 16338d25d3d1bf106de7937c261a1656 485 Gene3D G3DSA:3.30.479.30 77 192 1.7E-37 T 14-10-2018 DB29_02243 16338d25d3d1bf106de7937c261a1656 485 SMART SM00244 119 301 1.1E-7 T 14-10-2018 IPR001107 Band 7 domain DB29_03013 4ef491f2de3491d5836220e3083ab3b5 127 Pfam PF17329 Family of unknown function (DUF5367) 25 120 4.4E-39 T 14-10-2018 IPR020509 Uncharacterised protein family YnzE DB29_03478 5f4bd9fdcd55c3577ebb0f5fa7a0aa23 108 SUPERFAMILY SSF52833 3 103 2.29E-25 T 14-10-2018 IPR036249 Thioredoxin-like superfamily DB29_03478 5f4bd9fdcd55c3577ebb0f5fa7a0aa23 108 Pfam PF00085 Thioredoxin 7 102 8.9E-16 T 14-10-2018 IPR013766 Thioredoxin domain GO:0045454 DB29_03478 5f4bd9fdcd55c3577ebb0f5fa7a0aa23 108 Gene3D G3DSA:3.40.30.10 1 107 7.2E-23 T 14-10-2018 DB29_02385 d5e32e6a4b3c25cd53ae9daad21994f3 307 TIGRFAM TIGR00350 lytR_cpsA_psr: cell envelope-related function transcriptional attenuator common domain 82 225 9.2E-45 T 14-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain DB29_02385 d5e32e6a4b3c25cd53ae9daad21994f3 307 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 83 225 1.7E-46 T 14-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain DB29_02385 d5e32e6a4b3c25cd53ae9daad21994f3 307 Gene3D G3DSA:1.10.260.150 53 307 1.7E-79 T 14-10-2018 DB29_00174 6644b238a7dca25b276e0af31a2294f7 190 SUPERFAMILY SSF46785 1 189 4.06E-29 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_00174 6644b238a7dca25b276e0af31a2294f7 190 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 42 57 1.4E-8 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DB29_00174 6644b238a7dca25b276e0af31a2294f7 190 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 57 72 1.4E-8 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DB29_00174 6644b238a7dca25b276e0af31a2294f7 190 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 10 25 1.4E-8 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DB29_00174 6644b238a7dca25b276e0af31a2294f7 190 Pfam PF01022 Bacterial regulatory protein, arsR family 15 60 3.0E-11 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DB29_00174 6644b238a7dca25b276e0af31a2294f7 190 Gene3D G3DSA:1.10.10.10 1 92 1.8E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_00174 6644b238a7dca25b276e0af31a2294f7 190 SMART SM00418 8 86 8.8E-16 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DB29_00174 6644b238a7dca25b276e0af31a2294f7 190 Pfam PF09860 Uncharacterized protein conserved in bacteria (DUF2087) 116 181 7.3E-20 T 14-10-2018 IPR018656 Domain of unknown function DUF2087 DB29_02824 a47586602f2fd334c124fca2b7b97edb 47 Gene3D G3DSA:1.10.287.1100 5 38 2.0E-12 T 14-10-2018 IPR036916 Sporulation inhibitor A superfamily DB29_02824 a47586602f2fd334c124fca2b7b97edb 47 SUPERFAMILY SSF100985 3 42 5.23E-11 T 14-10-2018 IPR036916 Sporulation inhibitor A superfamily DB29_02824 a47586602f2fd334c124fca2b7b97edb 47 Pfam PF08970 Sporulation inhibitor A 3 41 1.7E-14 T 14-10-2018 IPR015064 Sporulation inhibitor A DB29_02089 c71b2c9d24c330485cb480ff097ea947 406 Pfam PF13180 PDZ domain 302 400 1.9E-19 T 14-10-2018 IPR001478 PDZ domain GO:0005515 DB29_02089 c71b2c9d24c330485cb480ff097ea947 406 PRINTS PR00834 HtrA/DegQ protease family signature 151 171 3.5E-37 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 DB29_02089 c71b2c9d24c330485cb480ff097ea947 406 PRINTS PR00834 HtrA/DegQ protease family signature 192 216 3.5E-37 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 DB29_02089 c71b2c9d24c330485cb480ff097ea947 406 PRINTS PR00834 HtrA/DegQ protease family signature 348 360 3.5E-37 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 DB29_02089 c71b2c9d24c330485cb480ff097ea947 406 PRINTS PR00834 HtrA/DegQ protease family signature 258 275 3.5E-37 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 DB29_02089 c71b2c9d24c330485cb480ff097ea947 406 PRINTS PR00834 HtrA/DegQ protease family signature 236 253 3.5E-37 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 DB29_02089 c71b2c9d24c330485cb480ff097ea947 406 PRINTS PR00834 HtrA/DegQ protease family signature 130 142 3.5E-37 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 DB29_02089 c71b2c9d24c330485cb480ff097ea947 406 SMART SM00228 302 391 4.2E-13 T 14-10-2018 IPR001478 PDZ domain GO:0005515 DB29_02089 c71b2c9d24c330485cb480ff097ea947 406 SUPERFAMILY SSF50494 83 298 2.33E-57 T 14-10-2018 IPR009003 Peptidase S1, PA clan DB29_02089 c71b2c9d24c330485cb480ff097ea947 406 Gene3D G3DSA:2.30.42.10 302 405 2.8E-26 T 14-10-2018 DB29_02089 c71b2c9d24c330485cb480ff097ea947 406 Gene3D G3DSA:2.40.10.120 74 297 2.5E-66 T 14-10-2018 DB29_02089 c71b2c9d24c330485cb480ff097ea947 406 SUPERFAMILY SSF50156 301 402 1.26E-21 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 DB29_02089 c71b2c9d24c330485cb480ff097ea947 406 Pfam PF13365 Trypsin-like peptidase domain 118 265 5.4E-31 T 14-10-2018 DB29_02297 972c337c14219d8ae045096c524374ee 595 Gene3D G3DSA:1.10.1370.20 227 595 4.9E-135 T 14-10-2018 DB29_02297 972c337c14219d8ae045096c524374ee 595 SUPERFAMILY SSF55486 5 579 2.37E-119 T 14-10-2018 DB29_02297 972c337c14219d8ae045096c524374ee 595 TIGRFAM TIGR00181 pepF: oligoendopeptidase F 7 594 1.3E-194 T 14-10-2018 IPR004438 Peptidase M3B, oligoendopeptidase F GO:0004222|GO:0006508 DB29_02297 972c337c14219d8ae045096c524374ee 595 Gene3D G3DSA:1.10.287.830 180 225 9.1E-16 T 14-10-2018 DB29_02297 972c337c14219d8ae045096c524374ee 595 Pfam PF01432 Peptidase family M3 203 583 7.3E-69 T 14-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 DB29_02297 972c337c14219d8ae045096c524374ee 595 Pfam PF08439 Oligopeptidase F 114 182 4.3E-19 T 14-10-2018 IPR013647 Oligopeptidase F, N-terminal domain DB29_02297 972c337c14219d8ae045096c524374ee 595 Gene3D G3DSA:1.20.140.70 24 178 1.8E-38 T 14-10-2018 DB29_01000 eb331b8350bed01708eb5084db6bf416 196 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 113 122 - T 14-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 DB29_01000 eb331b8350bed01708eb5084db6bf416 196 Gene3D G3DSA:2.40.260.10 60 195 2.2E-36 T 14-10-2018 IPR023365 Sortase domain superfamily DB29_01000 eb331b8350bed01708eb5084db6bf416 196 TIGRFAM TIGR01076 sortase_fam: sortase 73 191 5.9E-28 T 14-10-2018 IPR005754 Sortase family DB29_01000 eb331b8350bed01708eb5084db6bf416 196 Pfam PF04203 Sortase family 74 193 2.2E-27 T 14-10-2018 IPR005754 Sortase family DB29_01000 eb331b8350bed01708eb5084db6bf416 196 SUPERFAMILY SSF63817 55 194 2.75E-30 T 14-10-2018 IPR023365 Sortase domain superfamily DB29_01273 68d4c004a7acdb8717eb129cdf9d906c 199 SUPERFAMILY SSF52172 1 131 9.68E-29 T 14-10-2018 IPR011006 CheY-like superfamily DB29_01273 68d4c004a7acdb8717eb129cdf9d906c 199 SMART SM00421 135 192 4.9E-21 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DB29_01273 68d4c004a7acdb8717eb129cdf9d906c 199 Pfam PF00072 Response regulator receiver domain 4 114 1.9E-24 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DB29_01273 68d4c004a7acdb8717eb129cdf9d906c 199 Gene3D G3DSA:3.40.50.12740 2 198 1.5E-57 T 14-10-2018 DB29_01273 68d4c004a7acdb8717eb129cdf9d906c 199 SMART SM00448 2 113 9.5E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DB29_01273 68d4c004a7acdb8717eb129cdf9d906c 199 SUPERFAMILY SSF46894 121 198 2.01E-19 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DB29_01273 68d4c004a7acdb8717eb129cdf9d906c 199 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 168 180 7.7E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DB29_01273 68d4c004a7acdb8717eb129cdf9d906c 199 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 138 152 7.7E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DB29_01273 68d4c004a7acdb8717eb129cdf9d906c 199 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 152 168 7.7E-12 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DB29_01273 68d4c004a7acdb8717eb129cdf9d906c 199 Pfam PF00196 Bacterial regulatory proteins, luxR family 137 191 4.9E-18 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DB29_04376 3b5448c3de6d8b8644edc1363dcfe7a9 174 SUPERFAMILY SSF109635 3 86 1.24E-15 T 14-10-2018 IPR037187 DksA, N-terminal domain superfamily DB29_04376 3b5448c3de6d8b8644edc1363dcfe7a9 174 SUPERFAMILY SSF57716 87 120 3.42E-6 T 14-10-2018 DB29_04376 3b5448c3de6d8b8644edc1363dcfe7a9 174 Gene3D G3DSA:1.20.120.910 1 129 2.6E-30 T 14-10-2018 DB29_04376 3b5448c3de6d8b8644edc1363dcfe7a9 174 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 85 119 7.2E-10 T 14-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 DB29_01357 6f3ffa7a22fd6721ada9fca9d0b08fb3 240 Gene3D G3DSA:3.40.50.2300 4 146 1.1E-26 T 14-10-2018 DB29_01357 6f3ffa7a22fd6721ada9fca9d0b08fb3 240 SMART SM00448 6 119 9.3E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DB29_01357 6f3ffa7a22fd6721ada9fca9d0b08fb3 240 PIRSF PIRSF006171 4 240 2.2E-62 T 14-10-2018 IPR024187 Signal transduction response regulator, citrate/malate metabolism GO:0000160|GO:0003700 DB29_01357 6f3ffa7a22fd6721ada9fca9d0b08fb3 240 Pfam PF00072 Response regulator receiver domain 8 118 1.7E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DB29_01357 6f3ffa7a22fd6721ada9fca9d0b08fb3 240 SUPERFAMILY SSF52172 5 126 4.84E-29 T 14-10-2018 IPR011006 CheY-like superfamily DB29_01357 6f3ffa7a22fd6721ada9fca9d0b08fb3 240 Pfam PF12431 Transcriptional regulator 136 171 1.5E-11 T 14-10-2018 IPR028141 Transcriptional regulator DB29_00301 2a1275f8139b1ce205fa32a938cc4ee7 257 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB29_00301 2a1275f8139b1ce205fa32a938cc4ee7 257 SUPERFAMILY SSF52540 9 238 7.2E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_00301 2a1275f8139b1ce205fa32a938cc4ee7 257 SMART SM00382 32 228 1.3E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_00301 2a1275f8139b1ce205fa32a938cc4ee7 257 Gene3D G3DSA:3.40.50.300 2 254 8.4E-70 T 14-10-2018 DB29_00301 2a1275f8139b1ce205fa32a938cc4ee7 257 Pfam PF00005 ABC transporter 23 171 6.6E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB29_03190 9a8bca07e5f54dd1553bf819f0ba635a 458 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 16 435 1.3E-121 T 14-10-2018 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase DB29_03190 9a8bca07e5f54dd1553bf819f0ba635a 458 Pfam PF02397 Bacterial sugar transferase 251 431 1.4E-70 T 14-10-2018 IPR003362 Bacterial sugar transferase DB29_01839 63540747946fee9648bf21c6a0b91512 386 SMART SM00922 162 259 4.7E-11 T 14-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal DB29_01839 63540747946fee9648bf21c6a0b91512 386 Gene3D G3DSA:3.30.390.10 1 127 2.0E-59 T 14-10-2018 IPR029017 Enolase-like, N-terminal DB29_01839 63540747946fee9648bf21c6a0b91512 386 Pfam PF13378 Enolase C-terminal domain-like 165 378 9.2E-40 T 14-10-2018 IPR029065 Enolase C-terminal domain-like DB29_01839 63540747946fee9648bf21c6a0b91512 386 SUPERFAMILY SSF54826 1 139 1.77E-25 T 14-10-2018 DB29_01839 63540747946fee9648bf21c6a0b91512 386 SUPERFAMILY SSF51604 123 380 1.25E-52 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily DB29_01839 63540747946fee9648bf21c6a0b91512 386 Gene3D G3DSA:3.20.20.120 128 384 3.5E-63 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily DB29_00837 085e4afc5a172797f360d600cac2541f 498 Gene3D G3DSA:3.90.1210.30 3 84 1.3E-29 T 14-10-2018 DB29_00837 085e4afc5a172797f360d600cac2541f 498 Pfam PF08666 SAF domain 10 81 3.0E-13 T 14-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 DB29_00837 085e4afc5a172797f360d600cac2541f 498 Pfam PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus 111 496 7.6E-159 T 14-10-2018 IPR007392 D-galactarate/Altronate dehydratase, C-terminal GO:0016829 DB29_00837 085e4afc5a172797f360d600cac2541f 498 SMART SM00858 10 81 3.6E-15 T 14-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 DB29_01957 614f8849d3fc266235ee3b1255de28ee 193 Pfam PF09335 SNARE associated Golgi protein 29 137 1.8E-15 T 14-10-2018 IPR032816 SNARE associated Golgi protein DB29_02672 49fad3bd2a8b07eb723a18962c9de984 294 Gene3D G3DSA:1.10.3720.10 48 293 5.0E-66 T 14-10-2018 IPR035906 MetI-like superfamily DB29_02672 49fad3bd2a8b07eb723a18962c9de984 294 SUPERFAMILY SSF161098 52 284 2.49E-57 T 14-10-2018 IPR035906 MetI-like superfamily DB29_02672 49fad3bd2a8b07eb723a18962c9de984 294 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 83 291 5.4E-17 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DB29_03536 5f71a76e0c6445e20db4f108ea941a08 421 SMART SM01329 20 417 1.2E-184 T 14-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 DB29_03536 5f71a76e0c6445e20db4f108ea941a08 421 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 21 416 1.3E-121 T 14-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 DB29_03536 5f71a76e0c6445e20db4f108ea941a08 421 SUPERFAMILY SSF53659 4 421 5.95E-141 T 14-10-2018 DB29_03536 5f71a76e0c6445e20db4f108ea941a08 421 TIGRFAM TIGR00183 prok_nadp_idh: isocitrate dehydrogenase, NADP-dependent 3 421 1.2E-217 T 14-10-2018 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 DB29_03536 5f71a76e0c6445e20db4f108ea941a08 421 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 306 325 - T 14-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 DB29_03536 5f71a76e0c6445e20db4f108ea941a08 421 Gene3D G3DSA:3.40.718.10 1 421 1.1E-179 T 14-10-2018 DB29_02215 b60d826450e05d900b6d46852abf93d4 257 SUPERFAMILY SSF89082 162 248 2.35E-22 T 14-10-2018 IPR036244 TipA-like multidrug resistance regulator, antibiotic-recognition domain DB29_02215 b60d826450e05d900b6d46852abf93d4 257 Gene3D G3DSA:1.10.1660.10 4 140 3.6E-33 T 14-10-2018 DB29_02215 b60d826450e05d900b6d46852abf93d4 257 SMART SM00422 6 75 7.9E-19 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DB29_02215 b60d826450e05d900b6d46852abf93d4 257 Pfam PF07739 TipAS antibiotic-recognition domain 131 246 2.7E-24 T 14-10-2018 IPR012925 TipAS antibiotic-recognition domain DB29_02215 b60d826450e05d900b6d46852abf93d4 257 SUPERFAMILY SSF46955 6 107 1.61E-24 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily DB29_02215 b60d826450e05d900b6d46852abf93d4 257 Pfam PF13411 MerR HTH family regulatory protein 8 73 6.3E-14 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DB29_02215 b60d826450e05d900b6d46852abf93d4 257 Gene3D G3DSA:1.10.490.50 142 249 2.0E-10 T 14-10-2018 IPR036244 TipA-like multidrug resistance regulator, antibiotic-recognition domain DB29_02715 b7e769e512d1b4a760d8713a0ac97014 293 SUPERFAMILY SSF53613 4 289 3.74E-77 T 14-10-2018 IPR029056 Ribokinase-like DB29_02715 b7e769e512d1b4a760d8713a0ac97014 293 Gene3D G3DSA:3.40.1190.20 2 293 8.7E-91 T 14-10-2018 IPR029056 Ribokinase-like DB29_02715 b7e769e512d1b4a760d8713a0ac97014 293 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 233 246 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 DB29_02715 b7e769e512d1b4a760d8713a0ac97014 293 PRINTS PR00990 Ribokinase signature 35 54 4.2E-31 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 DB29_02715 b7e769e512d1b4a760d8713a0ac97014 293 PRINTS PR00990 Ribokinase signature 204 215 4.2E-31 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 DB29_02715 b7e769e512d1b4a760d8713a0ac97014 293 PRINTS PR00990 Ribokinase signature 106 119 4.2E-31 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 DB29_02715 b7e769e512d1b4a760d8713a0ac97014 293 PRINTS PR00990 Ribokinase signature 8 29 4.2E-31 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 DB29_02715 b7e769e512d1b4a760d8713a0ac97014 293 PRINTS PR00990 Ribokinase signature 174 189 4.2E-31 T 14-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 DB29_02715 b7e769e512d1b4a760d8713a0ac97014 293 TIGRFAM TIGR02152 D_ribokin_bact: ribokinase 6 286 3.0E-99 T 14-10-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 DB29_02715 b7e769e512d1b4a760d8713a0ac97014 293 Hamap MF_01987 Ribokinase [rbsK]. 4 288 24.877 T 14-10-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 DB29_02715 b7e769e512d1b4a760d8713a0ac97014 293 Pfam PF00294 pfkB family carbohydrate kinase 4 281 9.7E-63 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB DB29_00475 fdf67e3bb188aada5cb95fdc811c455a 178 ProDom PD469575 TRANSCRIPTION DNA-BINDING REGULATION TRANSCRIPTIONAL REGULATOR REPRESSOR FAMILY BIOTIN REGULATOR 3H 82 176 3.0E-50 T 14-10-2018 IPR004173 3H domain GO:0036094 DB29_00475 fdf67e3bb188aada5cb95fdc811c455a 178 SUPERFAMILY SSF75500 74 177 1.44E-32 T 14-10-2018 IPR035922 3H domain superfamily DB29_00475 fdf67e3bb188aada5cb95fdc811c455a 178 SUPERFAMILY SSF46785 8 67 2.72E-10 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_00475 fdf67e3bb188aada5cb95fdc811c455a 178 Gene3D G3DSA:1.10.10.10 1 67 6.6E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_00475 fdf67e3bb188aada5cb95fdc811c455a 178 Pfam PF08279 HTH domain 12 64 9.5E-13 T 14-10-2018 IPR013196 Helix-turn-helix, type 11 DB29_00475 fdf67e3bb188aada5cb95fdc811c455a 178 Gene3D G3DSA:3.30.1340.20 72 178 3.6E-34 T 14-10-2018 IPR035922 3H domain superfamily DB29_00475 fdf67e3bb188aada5cb95fdc811c455a 178 Pfam PF02829 3H domain 79 175 1.1E-31 T 14-10-2018 IPR004173 3H domain GO:0036094 DB29_00475 fdf67e3bb188aada5cb95fdc811c455a 178 PIRSF PIRSF037847 7 178 1.8E-67 T 14-10-2018 IPR026043 Transcription repressor NadR DB29_03059 6d65312759393dee8205276f49f2313f 508 ProSitePatterns PS01163 Galactose-1-phosphate uridyl transferase family 2 signature. 263 280 - T 14-10-2018 IPR023425 Galactose-1-phosphate uridyl transferase, class II, conserved site GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527 DB29_03059 6d65312759393dee8205276f49f2313f 508 Pfam PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain 59 235 6.8E-27 T 14-10-2018 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 DB29_03059 6d65312759393dee8205276f49f2313f 508 PIRSF PIRSF006005 3 507 2.0E-203 T 14-10-2018 IPR000766 Galactose-1-phosphate uridyl transferase, class II GO:0005737|GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527 DB29_03059 6d65312759393dee8205276f49f2313f 508 Pfam PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain 250 451 9.6E-31 T 14-10-2018 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-5609978|Reactome: R-HSA-70370 DB29_03059 6d65312759393dee8205276f49f2313f 508 Hamap MF_00571 Galactose-1-phosphate uridylyltransferase [galT]. 1 508 244.269 T 14-10-2018 IPR000766 Galactose-1-phosphate uridyl transferase, class II GO:0005737|GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527 DB29_03059 6d65312759393dee8205276f49f2313f 508 TIGRFAM TIGR01239 galT_2: galactose-1-phosphate uridylyltransferase 9 503 1.9E-199 T 14-10-2018 IPR000766 Galactose-1-phosphate uridyl transferase, class II GO:0005737|GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527 DB29_02120 4b4098eea3dc60dfd235f90dc46f2b55 701 Gene3D G3DSA:1.20.1640.10 146 351 1.2E-13 T 14-10-2018 DB29_02120 4b4098eea3dc60dfd235f90dc46f2b55 701 Gene3D G3DSA:1.20.1640.10 499 700 1.7E-9 T 14-10-2018 DB29_02120 4b4098eea3dc60dfd235f90dc46f2b55 701 SUPERFAMILY SSF82866 127 342 1.44E-31 T 14-10-2018 DB29_02120 4b4098eea3dc60dfd235f90dc46f2b55 701 SUPERFAMILY SSF82866 461 685 1.11E-21 T 14-10-2018 DB29_02120 4b4098eea3dc60dfd235f90dc46f2b55 701 Pfam PF03176 MMPL family 134 339 4.9E-26 T 14-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 DB29_02120 4b4098eea3dc60dfd235f90dc46f2b55 701 Pfam PF03176 MMPL family 421 684 9.9E-23 T 14-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 DB29_01177 cfd3e7d3e87876619baa79373415dd08 64 Pfam PF07883 Cupin domain 13 44 6.6E-7 T 14-10-2018 IPR013096 Cupin 2, conserved barrel DB29_01177 cfd3e7d3e87876619baa79373415dd08 64 SUPERFAMILY SSF51182 8 51 1.89E-11 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily DB29_01177 cfd3e7d3e87876619baa79373415dd08 64 Gene3D G3DSA:2.60.120.10 1 64 9.0E-18 T 14-10-2018 IPR014710 RmlC-like jelly roll fold DB29_02721 b1090f1fed441a52634efc2a0ebf92d7 132 Pfam PF14526 Integron-associated effector binding protein 9 130 1.5E-10 T 14-10-2018 IPR029441 Integron-associated effector binding protein DB29_02721 b1090f1fed441a52634efc2a0ebf92d7 132 SMART SM00871 1 131 3.5E-4 T 14-10-2018 IPR010499 Bacterial transcription activator, effector binding DB29_02721 b1090f1fed441a52634efc2a0ebf92d7 132 Gene3D G3DSA:3.20.80.10 3 131 2.3E-25 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily DB29_02721 b1090f1fed441a52634efc2a0ebf92d7 132 SUPERFAMILY SSF55136 21 131 2.43E-7 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily DB29_03777 43274e4ee0fbbc8a2790cb83512c0e50 284 Gene3D G3DSA:3.20.10.10 122 282 4.2E-54 T 14-10-2018 DB29_03777 43274e4ee0fbbc8a2790cb83512c0e50 284 TIGRFAM TIGR01121 D_amino_aminoT: D-amino-acid transaminase 4 276 1.5E-103 T 14-10-2018 IPR005784 D-amino acid aminotransferase GO:0008483|GO:0030170|GO:0046416 KEGG: 00310+2.6.1.21|KEGG: 00330+2.6.1.21|KEGG: 00360+2.6.1.21|KEGG: 00472+2.6.1.21|KEGG: 00473+2.6.1.21 DB29_03777 43274e4ee0fbbc8a2790cb83512c0e50 284 SUPERFAMILY SSF56752 4 278 8.24E-77 T 14-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 DB29_03777 43274e4ee0fbbc8a2790cb83512c0e50 284 ProSitePatterns PS00770 Aminotransferases class-IV signature. 177 206 - T 14-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 DB29_03777 43274e4ee0fbbc8a2790cb83512c0e50 284 Pfam PF01063 Amino-transferase class IV 30 249 7.7E-48 T 14-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 DB29_03777 43274e4ee0fbbc8a2790cb83512c0e50 284 Gene3D G3DSA:3.30.470.10 2 121 5.6E-31 T 14-10-2018 DB29_02529 62cf1b9aaa03fa0de9a06fe4390a547d 204 Pfam PF01965 DJ-1/PfpI family 7 185 1.6E-26 T 14-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 DB29_02529 62cf1b9aaa03fa0de9a06fe4390a547d 204 SUPERFAMILY SSF52317 6 202 6.11E-45 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like DB29_02529 62cf1b9aaa03fa0de9a06fe4390a547d 204 Gene3D G3DSA:3.40.50.880 2 203 6.5E-61 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like DB29_02570 46a7cd4e3a64e9d208a369bd22f5b239 551 SUPERFAMILY SSF161098 292 547 4.39E-52 T 14-10-2018 IPR035906 MetI-like superfamily DB29_02570 46a7cd4e3a64e9d208a369bd22f5b239 551 SUPERFAMILY SSF161098 9 270 1.59E-54 T 14-10-2018 IPR035906 MetI-like superfamily DB29_02570 46a7cd4e3a64e9d208a369bd22f5b239 551 Gene3D G3DSA:1.10.3720.10 299 550 1.4E-51 T 14-10-2018 IPR035906 MetI-like superfamily DB29_02570 46a7cd4e3a64e9d208a369bd22f5b239 551 Gene3D G3DSA:1.10.3720.10 9 278 2.3E-62 T 14-10-2018 IPR035906 MetI-like superfamily DB29_02570 46a7cd4e3a64e9d208a369bd22f5b239 551 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 77 273 1.2E-17 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DB29_02570 46a7cd4e3a64e9d208a369bd22f5b239 551 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 365 540 7.0E-17 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DB29_02412 0a492717ebb01ed775e4ce2beac6c8b7 163 ProSitePatterns PS00654 PRD domain signature. 97 109 - T 14-10-2018 IPR001550 Transcription antiterminator, conserved site GO:0003723|GO:0045893 DB29_02412 0a492717ebb01ed775e4ce2beac6c8b7 163 Gene3D G3DSA:1.10.1790.10 63 149 3.7E-27 T 14-10-2018 DB29_02412 0a492717ebb01ed775e4ce2beac6c8b7 163 Gene3D G3DSA:2.30.24.10 1 53 7.6E-22 T 14-10-2018 IPR036650 CAT RNA-binding domain superfamily GO:0003723 DB29_02412 0a492717ebb01ed775e4ce2beac6c8b7 163 SUPERFAMILY SSF50151 1 52 1.15E-16 T 14-10-2018 IPR036650 CAT RNA-binding domain superfamily GO:0003723 DB29_02412 0a492717ebb01ed775e4ce2beac6c8b7 163 Pfam PF00874 PRD domain 74 141 8.0E-17 T 14-10-2018 IPR011608 PRD domain GO:0006355 DB29_02412 0a492717ebb01ed775e4ce2beac6c8b7 163 Pfam PF03123 CAT RNA binding domain 1 55 1.2E-22 T 14-10-2018 IPR004341 CAT RNA-binding domain GO:0003723 DB29_02412 0a492717ebb01ed775e4ce2beac6c8b7 163 SMART SM01061 1 58 1.7E-26 T 14-10-2018 IPR004341 CAT RNA-binding domain GO:0003723 DB29_02412 0a492717ebb01ed775e4ce2beac6c8b7 163 SUPERFAMILY SSF63520 56 141 2.49E-22 T 14-10-2018 IPR036634 PRD domain superfamily GO:0006355 DB29_03218 858e1fbd2f5d66010f8fc78ad70ac160 146 Gene3D G3DSA:2.30.290.10 1 143 4.1E-48 T 14-10-2018 IPR024046 Flagellar assembly factor FliW domain superfamily DB29_03218 858e1fbd2f5d66010f8fc78ad70ac160 146 Hamap MF_01185 Flagellar assembly factor FliW [fliW]. 17 141 24.441 T 14-10-2018 IPR003775 Flagellar assembly factor FliW GO:0044780 DB29_03218 858e1fbd2f5d66010f8fc78ad70ac160 146 SUPERFAMILY SSF141457 2 140 4.58E-46 T 14-10-2018 IPR024046 Flagellar assembly factor FliW domain superfamily DB29_03218 858e1fbd2f5d66010f8fc78ad70ac160 146 Pfam PF02623 FliW protein 19 138 9.1E-36 T 14-10-2018 IPR003775 Flagellar assembly factor FliW GO:0044780 DB29_02116 da7b1c5e68bf3b2e8e9db075fbee8bec 309 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 22 74 1.6E-13 T 14-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain DB29_02116 da7b1c5e68bf3b2e8e9db075fbee8bec 309 Gene3D G3DSA:1.10.3720.10 87 307 1.5E-21 T 14-10-2018 IPR035906 MetI-like superfamily DB29_02116 da7b1c5e68bf3b2e8e9db075fbee8bec 309 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 115 307 1.7E-32 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DB29_02116 da7b1c5e68bf3b2e8e9db075fbee8bec 309 SUPERFAMILY SSF161098 93 289 3.01E-22 T 14-10-2018 IPR035906 MetI-like superfamily DB29_01072 3bef24646074d6634aebf674011e2632 1329 SUPERFAMILY SSF57997 573 739 5.56E-5 T 14-10-2018 DB29_01072 3bef24646074d6634aebf674011e2632 1329 Gene3D G3DSA:2.60.40.10 405 498 1.3E-9 T 14-10-2018 IPR013783 Immunoglobulin-like fold DB29_01072 3bef24646074d6634aebf674011e2632 1329 TIGRFAM TIGR01665 put_anti_recept: phage minor structural protein, N-terminal region 28 362 6.1E-37 T 14-10-2018 IPR007119 Phage minor structural protein, N-terminal domain DB29_01072 3bef24646074d6634aebf674011e2632 1329 Gene3D G3DSA:1.20.5.340 644 740 8.0E-9 T 14-10-2018 DB29_01072 3bef24646074d6634aebf674011e2632 1329 SUPERFAMILY SSF49265 406 502 4.22E-10 T 14-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 DB29_01072 3bef24646074d6634aebf674011e2632 1329 Pfam PF02018 Carbohydrate binding domain 759 879 1.2E-10 T 14-10-2018 IPR003305 Carbohydrate-binding, CenC-like GO:0016798 DB29_01072 3bef24646074d6634aebf674011e2632 1329 SUPERFAMILY SSF49785 757 902 3.91E-20 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily DB29_01072 3bef24646074d6634aebf674011e2632 1329 Pfam PF06605 Prophage endopeptidase tail 33 371 9.0E-34 T 14-10-2018 IPR010572 Prophage tail endopeptidase DB29_01072 3bef24646074d6634aebf674011e2632 1329 Gene3D G3DSA:2.60.120.260 758 900 3.7E-17 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily DB29_00015 4d202f0fda9d744a3053f5e92f28e907 154 Pfam PF13826 Domain of unknown function (DUF4188) 15 132 4.3E-43 T 14-10-2018 IPR025444 Monooxygenase af470-like DB29_03818 c270cf603b05205190d1c78b5562d110 333 Gene3D G3DSA:3.40.50.970 1 333 1.9E-119 T 14-10-2018 DB29_03818 c270cf603b05205190d1c78b5562d110 333 SUPERFAMILY SSF52518 7 330 1.26E-100 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold DB29_03818 c270cf603b05205190d1c78b5562d110 333 Pfam PF00676 Dehydrogenase E1 component 20 320 8.6E-105 T 14-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 DB29_03866 b279470c05700d0244c04727afc12e9b 87 PIRSF PIRSF037260 1 87 2.7E-32 T 14-10-2018 IPR007920 Protein of unknown function UPF0223 DB29_03866 b279470c05700d0244c04727afc12e9b 87 SUPERFAMILY SSF158504 2 82 6.28E-26 T 14-10-2018 IPR023324 BH2638-like superfamily DB29_03866 b279470c05700d0244c04727afc12e9b 87 Pfam PF05256 Uncharacterised protein family (UPF0223) 1 84 4.8E-28 T 14-10-2018 IPR007920 Protein of unknown function UPF0223 DB29_03866 b279470c05700d0244c04727afc12e9b 87 Gene3D G3DSA:1.10.220.80 10 86 2.7E-24 T 14-10-2018 IPR023324 BH2638-like superfamily DB29_03866 b279470c05700d0244c04727afc12e9b 87 ProDom PD062738 UPF0223 FAMILY UNCHARACTERISED CYTOSOLIC SUPERFAMILY YKTA LMO1058/LIN1050 INOSITOL MW0980 M6_SPY0948 1 84 1.0E-42 T 14-10-2018 IPR007920 Protein of unknown function UPF0223 DB29_04089 500a65e5b5325d4046dd281fc7b4f579 139 Pfam PF06133 Control of competence regulator ComK, YlbF/YmcA 10 114 1.8E-23 T 14-10-2018 IPR010368 Control of competence regulator ComK, YlbF/YmcA DB29_04089 500a65e5b5325d4046dd281fc7b4f579 139 PIRSF PIRSF021287 2 124 7.3E-52 T 14-10-2018 IPR016783 Biofilm formation YmcA DB29_04089 500a65e5b5325d4046dd281fc7b4f579 139 Gene3D G3DSA:1.20.1500.10 2 124 7.2E-35 T 14-10-2018 IPR023378 YheA/YmcA-like domain superfamily DB29_04089 500a65e5b5325d4046dd281fc7b4f579 139 SUPERFAMILY SSF158622 5 123 6.02E-33 T 14-10-2018 IPR023378 YheA/YmcA-like domain superfamily DB29_04028 731a33180962b0f3a355498cc8001bca 325 Gene3D G3DSA:3.40.50.300 127 309 8.4E-61 T 14-10-2018 DB29_04028 731a33180962b0f3a355498cc8001bca 325 SMART SM01245 5 55 7.1E-4 T 14-10-2018 IPR032782 Jag, N-terminal DB29_04028 731a33180962b0f3a355498cc8001bca 325 Pfam PF00448 SRP54-type protein, GTPase domain 135 321 4.5E-38 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 DB29_04028 731a33180962b0f3a355498cc8001bca 325 SMART SM00962 133 323 1.3E-48 T 14-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 DB29_04028 731a33180962b0f3a355498cc8001bca 325 Gene3D G3DSA:1.20.120.1380 89 126 8.4E-61 T 14-10-2018 DB29_04028 731a33180962b0f3a355498cc8001bca 325 SUPERFAMILY SSF52540 131 322 8.2E-30 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_04028 731a33180962b0f3a355498cc8001bca 325 SMART SM00382 132 273 2.3E-5 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_01434 ac754fa6b4ec5bbee374d1a4e8df42af 301 Gene3D G3DSA:1.25.40.10 29 297 3.2E-36 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DB29_01434 ac754fa6b4ec5bbee374d1a4e8df42af 301 SUPERFAMILY SSF48452 160 271 2.88E-10 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DB29_01434 ac754fa6b4ec5bbee374d1a4e8df42af 301 Pfam PF13181 Tetratricopeptide repeat 203 233 0.0051 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DB29_01434 ac754fa6b4ec5bbee374d1a4e8df42af 301 Pfam PF13176 Tetratricopeptide repeat 161 186 0.026 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DB29_00969 3f0699b232850fd765faedec8c423e7a 121 Gene3D G3DSA:3.10.450.50 2 121 2.0E-18 T 14-10-2018 DB29_00969 3f0699b232850fd765faedec8c423e7a 121 Pfam PF13474 SnoaL-like domain 5 118 4.2E-10 T 14-10-2018 IPR037401 SnoaL-like domain DB29_00969 3f0699b232850fd765faedec8c423e7a 121 SUPERFAMILY SSF54427 5 118 1.01E-27 T 14-10-2018 IPR032710 NTF2-like domain superfamily DB29_02923 4a92902b70466df6fd6ec8c3aa75295b 427 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 17 421 1.7E-124 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 DB29_02923 4a92902b70466df6fd6ec8c3aa75295b 427 PIRSF PIRSF006066 1 427 4.3E-147 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 DB29_02923 4a92902b70466df6fd6ec8c3aa75295b 427 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 8 415 1.0E-117 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit DB29_04045 a3d20abe9bb9dd34b19e2f7af54c3322 156 Gene3D G3DSA:3.30.300.70 2 81 2.8E-31 T 14-10-2018 IPR035956 RimP, N-terminal domain superfamily DB29_04045 a3d20abe9bb9dd34b19e2f7af54c3322 156 SUPERFAMILY SSF75420 4 84 5.1E-27 T 14-10-2018 IPR035956 RimP, N-terminal domain superfamily DB29_04045 a3d20abe9bb9dd34b19e2f7af54c3322 156 Pfam PF02576 RimP N-terminal domain 12 84 5.5E-31 T 14-10-2018 IPR028989 Ribosome maturation factor RimP, N-terminal DB29_04045 a3d20abe9bb9dd34b19e2f7af54c3322 156 Gene3D G3DSA:2.30.30.180 88 154 7.2E-21 T 14-10-2018 DB29_04045 a3d20abe9bb9dd34b19e2f7af54c3322 156 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 7 156 24.25 T 14-10-2018 IPR003728 Ribosome maturation factor RimP GO:0042274 DB29_04045 a3d20abe9bb9dd34b19e2f7af54c3322 156 SUPERFAMILY SSF74942 85 153 3.01E-17 T 14-10-2018 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily DB29_04045 a3d20abe9bb9dd34b19e2f7af54c3322 156 Pfam PF17384 RimP C-terminal SH3 domain 87 154 1.1E-15 T 14-10-2018 IPR028998 Ribosome maturation factor RimP, C-terminal DB29_03666 c02a85d81bc36c090201799bd0c38e4a 270 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 25 270 4.8E-120 T 14-10-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 DB29_03666 c02a85d81bc36c090201799bd0c38e4a 270 Pfam PF00005 ABC transporter 41 194 1.4E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB29_03666 c02a85d81bc36c090201799bd0c38e4a 270 Gene3D G3DSA:3.40.50.300 22 268 1.0E-62 T 14-10-2018 DB29_03666 c02a85d81bc36c090201799bd0c38e4a 270 SUPERFAMILY SSF52540 24 264 3.03E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_03666 c02a85d81bc36c090201799bd0c38e4a 270 ProSitePatterns PS00211 ABC transporters family signature. 167 181 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB29_03666 c02a85d81bc36c090201799bd0c38e4a 270 SMART SM00382 49 242 1.5E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_03097 60047829297f4353d4863b790179523a 249 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 32 213 8.8E-20 T 14-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain DB29_03097 60047829297f4353d4863b790179523a 249 Gene3D G3DSA:2.40.50.100 35 162 2.5E-29 T 14-10-2018 DB29_03097 60047829297f4353d4863b790179523a 249 Gene3D G3DSA:2.40.30.170 24 242 2.5E-29 T 14-10-2018 DB29_03097 60047829297f4353d4863b790179523a 249 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 23 246 2.0E-32 T 14-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 DB29_03097 60047829297f4353d4863b790179523a 249 Gene3D G3DSA:1.10.287.470 68 127 2.5E-29 T 14-10-2018 DB29_03097 60047829297f4353d4863b790179523a 249 SUPERFAMILY SSF111369 27 212 1.96E-18 T 14-10-2018 DB29_04062 353d5eaa98fb9a5d0cd431528ea7ef47 350 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 141 329 2.1E-55 T 14-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 DB29_04062 353d5eaa98fb9a5d0cd431528ea7ef47 350 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 239 253 - T 14-10-2018 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 DB29_04062 353d5eaa98fb9a5d0cd431528ea7ef47 350 PIRSF PIRSF000148 6 348 1.6E-128 T 14-10-2018 DB29_04062 353d5eaa98fb9a5d0cd431528ea7ef47 350 SUPERFAMILY SSF51735 7 158 8.16E-49 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_04062 353d5eaa98fb9a5d0cd431528ea7ef47 350 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 9 122 1.4E-33 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 DB29_04062 353d5eaa98fb9a5d0cd431528ea7ef47 350 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 6 343 36.607 T 14-10-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 DB29_04062 353d5eaa98fb9a5d0cd431528ea7ef47 350 Gene3D G3DSA:3.40.50.720 9 340 2.8E-138 T 14-10-2018 DB29_04062 353d5eaa98fb9a5d0cd431528ea7ef47 350 SUPERFAMILY SSF55347 131 330 3.42E-71 T 14-10-2018 DB29_04062 353d5eaa98fb9a5d0cd431528ea7ef47 350 TIGRFAM TIGR01296 asd_B: aspartate-semialdehyde dehydrogenase 9 344 3.6E-155 T 14-10-2018 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 DB29_04062 353d5eaa98fb9a5d0cd431528ea7ef47 350 Gene3D G3DSA:3.30.360.10 130 326 2.8E-138 T 14-10-2018 DB29_04062 353d5eaa98fb9a5d0cd431528ea7ef47 350 SMART SM00859 8 123 7.2E-43 T 14-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 DB29_01288 a3eb379d85934cfa1e181f3b1ba14237 215 SUPERFAMILY SSF52172 1 131 1.71E-31 T 14-10-2018 IPR011006 CheY-like superfamily DB29_01288 a3eb379d85934cfa1e181f3b1ba14237 215 SMART SM00421 150 207 1.3E-24 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DB29_01288 a3eb379d85934cfa1e181f3b1ba14237 215 SUPERFAMILY SSF46894 144 213 2.21E-21 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DB29_01288 a3eb379d85934cfa1e181f3b1ba14237 215 SMART SM00448 1 115 1.3E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DB29_01288 a3eb379d85934cfa1e181f3b1ba14237 215 Gene3D G3DSA:3.40.50.12740 1 213 3.6E-67 T 14-10-2018 DB29_01288 a3eb379d85934cfa1e181f3b1ba14237 215 Pfam PF00072 Response regulator receiver domain 3 116 7.2E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DB29_01288 a3eb379d85934cfa1e181f3b1ba14237 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 167 183 3.0E-14 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DB29_01288 a3eb379d85934cfa1e181f3b1ba14237 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 153 167 3.0E-14 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DB29_01288 a3eb379d85934cfa1e181f3b1ba14237 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 183 195 3.0E-14 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DB29_01288 a3eb379d85934cfa1e181f3b1ba14237 215 Pfam PF00196 Bacterial regulatory proteins, luxR family 153 207 7.1E-21 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DB29_02518 1816dfc3880d48d3d7596e1fe35cad4a 389 Pfam PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase 18 383 8.1E-59 T 14-10-2018 IPR007554 CDP-glycerol glycerophosphotransferase GO:0016020|GO:0047355 DB29_02518 1816dfc3880d48d3d7596e1fe35cad4a 389 SUPERFAMILY SSF53756 147 384 3.24E-9 T 14-10-2018 DB29_02518 1816dfc3880d48d3d7596e1fe35cad4a 389 Gene3D G3DSA:3.40.50.11820 20 380 1.0E-46 T 14-10-2018 DB29_02518 1816dfc3880d48d3d7596e1fe35cad4a 389 Gene3D G3DSA:3.40.50.12580 189 373 1.0E-46 T 14-10-2018 DB29_00414 c4574ebe257d1f35bb49440cd32bb9aa 278 Pfam PF02735 Ku70/Ku80 beta-barrel domain 11 191 6.5E-38 T 14-10-2018 IPR006164 Ku70/Ku80 beta-barrel domain GO:0003677|GO:0006303 Reactome: R-HSA-164843|Reactome: R-HSA-1834949|Reactome: R-HSA-3270619|Reactome: R-HSA-5693571|Reactome: R-HSA-6798695 DB29_00414 c4574ebe257d1f35bb49440cd32bb9aa 278 Gene3D G3DSA:2.40.290.10 2 180 7.0E-19 T 14-10-2018 IPR016194 SPOC-like, C-terminal domain superfamily DB29_00414 c4574ebe257d1f35bb49440cd32bb9aa 278 TIGRFAM TIGR02772 Ku_bact: Ku protein 1 258 1.6E-91 T 14-10-2018 IPR009187 Non-homologous end joining protein Ku, prokaryotic type DB29_00414 c4574ebe257d1f35bb49440cd32bb9aa 278 SUPERFAMILY SSF100939 2 262 3.14E-48 T 14-10-2018 IPR016194 SPOC-like, C-terminal domain superfamily DB29_00414 c4574ebe257d1f35bb49440cd32bb9aa 278 SMART SM00559 52 181 2.0E-40 T 14-10-2018 IPR006164 Ku70/Ku80 beta-barrel domain GO:0003677|GO:0006303 Reactome: R-HSA-164843|Reactome: R-HSA-1834949|Reactome: R-HSA-3270619|Reactome: R-HSA-5693571|Reactome: R-HSA-6798695 DB29_00414 c4574ebe257d1f35bb49440cd32bb9aa 278 PIRSF PIRSF006493 1 278 1.4E-100 T 14-10-2018 IPR009187 Non-homologous end joining protein Ku, prokaryotic type DB29_00414 c4574ebe257d1f35bb49440cd32bb9aa 278 Hamap MF_01875 Non-homologous end joining protein Ku [ku]. 1 256 32.589 T 14-10-2018 IPR009187 Non-homologous end joining protein Ku, prokaryotic type DB29_01372 879b8f93e5a35d150bb3efcc59ab2184 285 SUPERFAMILY SSF140959 28 284 2.22E-98 T 14-10-2018 IPR037217 Tryptophan/Indoleamine 2,3-dioxygenase-like GO:0019441|GO:0020037|GO:0046872 KEGG: 00380+1.13.11.11|Reactome: R-HSA-71240 DB29_01372 879b8f93e5a35d150bb3efcc59ab2184 285 Hamap MF_01972 Tryptophan 2,3-dioxygenase [kynA]. 22 285 39.822 T 14-10-2018 IPR004981 Tryptophan 2,3-dioxygenase GO:0004833|GO:0019441|GO:0020037 KEGG: 00380+1.13.11.11|Reactome: R-HSA-71240 DB29_01372 879b8f93e5a35d150bb3efcc59ab2184 285 Pfam PF03301 Tryptophan 2,3-dioxygenase 20 211 1.5E-41 T 14-10-2018 IPR004981 Tryptophan 2,3-dioxygenase GO:0004833|GO:0019441|GO:0020037 KEGG: 00380+1.13.11.11|Reactome: R-HSA-71240 DB29_01372 879b8f93e5a35d150bb3efcc59ab2184 285 TIGRFAM TIGR03036 trp_2_3_diox: tryptophan 2,3-dioxygenase 22 285 3.2E-128 T 14-10-2018 IPR017485 Tryptophan 2,3-dioxygenase, bacterial GO:0004833|GO:0019441 KEGG: 00380+1.13.11.11 DB29_01372 879b8f93e5a35d150bb3efcc59ab2184 285 Gene3D G3DSA:1.20.58.480 26 285 3.5E-94 T 14-10-2018 DB29_03273 30b85704bb58ba985e182ab8da8c19d7 83 Gene3D G3DSA:3.40.30.10 1 75 1.7E-16 T 14-10-2018 DB29_03273 30b85704bb58ba985e182ab8da8c19d7 83 SUPERFAMILY SSF52833 3 78 9.69E-18 T 14-10-2018 IPR036249 Thioredoxin-like superfamily DB29_03273 30b85704bb58ba985e182ab8da8c19d7 83 Pfam PF05768 Glutaredoxin-like domain (DUF836) 4 76 4.0E-15 T 14-10-2018 IPR008554 Glutaredoxin-like DB29_01485 d52381c9e1c8350d39a060af0cf8eef6 281 Pfam PF01380 SIS domain 126 255 1.4E-23 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 DB29_01485 d52381c9e1c8350d39a060af0cf8eef6 281 Gene3D G3DSA:1.10.10.10 2 79 5.9E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_01485 d52381c9e1c8350d39a060af0cf8eef6 281 Gene3D G3DSA:3.40.50.10490 95 279 3.6E-46 T 14-10-2018 DB29_01485 d52381c9e1c8350d39a060af0cf8eef6 281 SUPERFAMILY SSF46689 4 75 5.38E-14 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DB29_01485 d52381c9e1c8350d39a060af0cf8eef6 281 Pfam PF01418 Helix-turn-helix domain, rpiR family 5 76 9.8E-17 T 14-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 DB29_01485 d52381c9e1c8350d39a060af0cf8eef6 281 SUPERFAMILY SSF53697 99 264 1.7E-39 T 14-10-2018 DB29_00438 7762c018e9e1f59629010dc8b3fc94e5 368 SUPERFAMILY SSF51726 12 368 9.16E-79 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 DB29_00438 7762c018e9e1f59629010dc8b3fc94e5 368 Gene3D G3DSA:3.20.20.210 5 368 4.1E-115 T 14-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 DB29_00438 7762c018e9e1f59629010dc8b3fc94e5 368 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 15 364 6.9E-13 T 14-10-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 DB29_00215 50e6272fc2b7c1aa2415b5adca71a9ad 163 Gene3D G3DSA:3.30.1490.190 92 151 7.8E-16 T 14-10-2018 DB29_00215 50e6272fc2b7c1aa2415b5adca71a9ad 163 Pfam PF01475 Ferric uptake regulator family 16 136 1.5E-36 T 14-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 DB29_00215 50e6272fc2b7c1aa2415b5adca71a9ad 163 Gene3D G3DSA:1.10.10.10 1 88 9.4E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_00215 50e6272fc2b7c1aa2415b5adca71a9ad 163 SUPERFAMILY SSF46785 6 140 1.39E-35 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_03649 a4bfbd7ce9ced8ed6c316fa8725c0e1a 281 Pfam PF02163 Peptidase family M50 30 101 5.0E-7 T 14-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 DB29_02836 73c1f7834d5574a8bfea5be30c2341bc 303 Gene3D G3DSA:3.40.50.1820 11 298 3.2E-86 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DB29_02836 73c1f7834d5574a8bfea5be30c2341bc 303 Pfam PF00561 alpha/beta hydrolase fold 35 284 2.6E-29 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DB29_02836 73c1f7834d5574a8bfea5be30c2341bc 303 PRINTS PR00111 Alpha/beta hydrolase fold signature 120 133 3.0E-8 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DB29_02836 73c1f7834d5574a8bfea5be30c2341bc 303 PRINTS PR00111 Alpha/beta hydrolase fold signature 60 75 3.0E-8 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DB29_02836 73c1f7834d5574a8bfea5be30c2341bc 303 PRINTS PR00111 Alpha/beta hydrolase fold signature 106 119 3.0E-8 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DB29_02836 73c1f7834d5574a8bfea5be30c2341bc 303 SUPERFAMILY SSF53474 9 299 2.78E-76 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DB29_02836 73c1f7834d5574a8bfea5be30c2341bc 303 PRINTS PR00412 Epoxide hydrolase signature 120 133 2.3E-11 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 DB29_02836 73c1f7834d5574a8bfea5be30c2341bc 303 PRINTS PR00412 Epoxide hydrolase signature 274 296 2.3E-11 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 DB29_02836 73c1f7834d5574a8bfea5be30c2341bc 303 PRINTS PR00412 Epoxide hydrolase signature 106 119 2.3E-11 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 DB29_02836 73c1f7834d5574a8bfea5be30c2341bc 303 PRINTS PR00412 Epoxide hydrolase signature 41 59 2.3E-11 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 DB29_02147 af49506579025ae50a4e77cd7bfafb75 413 Gene3D G3DSA:1.10.4160.10 13 413 2.1E-47 T 14-10-2018 IPR038271 Purine-cytosine permease superfamily DB29_02147 af49506579025ae50a4e77cd7bfafb75 413 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 15 396 3.5E-44 T 14-10-2018 IPR001248 Purine-cytosine permease GO:0016020|GO:0022857|GO:0055085 DB29_02228 39264c1923352da1f9e040f82fe17b5b 457 Pfam PF01546 Peptidase family M20/M25/M40 84 452 6.7E-42 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 DB29_02228 39264c1923352da1f9e040f82fe17b5b 457 SUPERFAMILY SSF53187 3 456 5.78E-65 T 14-10-2018 DB29_02228 39264c1923352da1f9e040f82fe17b5b 457 Gene3D G3DSA:3.40.630.10 15 447 3.9E-169 T 14-10-2018 DB29_02228 39264c1923352da1f9e040f82fe17b5b 457 Pfam PF07687 Peptidase dimerisation domain 196 355 3.1E-28 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain DB29_02228 39264c1923352da1f9e040f82fe17b5b 457 Gene3D G3DSA:3.30.70.360 198 368 3.9E-169 T 14-10-2018 DB29_02228 39264c1923352da1f9e040f82fe17b5b 457 SUPERFAMILY SSF55031 198 363 4.85E-6 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain DB29_03025 f92761c978b25bf313e82c5c15048aa4 371 SMART SM00028 175 208 460.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DB29_03025 f92761c978b25bf313e82c5c15048aa4 371 SMART SM00028 213 246 99.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DB29_03025 f92761c978b25bf313e82c5c15048aa4 371 SMART SM00028 134 167 0.0036 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DB29_03025 f92761c978b25bf313e82c5c15048aa4 371 SMART SM00028 94 127 220.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DB29_03025 f92761c978b25bf313e82c5c15048aa4 371 SUPERFAMILY SSF48452 96 237 2.39E-12 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DB29_03025 f92761c978b25bf313e82c5c15048aa4 371 Gene3D G3DSA:1.25.40.10 1 365 1.2E-70 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DB29_01225 09d4cd63f426dcf595afc6a27afd3e6e 331 ProSitePatterns PS00211 ABC transporters family signature. 155 169 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB29_01225 09d4cd63f426dcf595afc6a27afd3e6e 331 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 232 318 1.8E-26 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DB29_01225 09d4cd63f426dcf595afc6a27afd3e6e 331 SUPERFAMILY SSF52540 31 316 5.08E-71 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_01225 09d4cd63f426dcf595afc6a27afd3e6e 331 Gene3D G3DSA:3.40.50.300 1 329 3.7E-103 T 14-10-2018 DB29_01225 09d4cd63f426dcf595afc6a27afd3e6e 331 Pfam PF00005 ABC transporter 24 182 3.0E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB29_01225 09d4cd63f426dcf595afc6a27afd3e6e 331 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 234 298 3.3E-20 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DB29_01225 09d4cd63f426dcf595afc6a27afd3e6e 331 SMART SM00382 32 232 7.4E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_01849 d622a963dbc5a7223432098149d19692 253 SUPERFAMILY SSF88713 13 242 3.78E-58 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 DB29_01849 d622a963dbc5a7223432098149d19692 253 Pfam PF01522 Polysaccharide deacetylase 54 174 7.0E-29 T 14-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 DB29_01849 d622a963dbc5a7223432098149d19692 253 TIGRFAM TIGR02764 spore_ybaN_pdaB: polysaccharide deacetylase family sporulation protein PdaB 52 242 1.8E-83 T 14-10-2018 IPR014132 Sporulation polysaccharide deacetylase, PdaB DB29_01849 d622a963dbc5a7223432098149d19692 253 Gene3D G3DSA:3.20.20.370 47 252 1.1E-57 T 14-10-2018 DB29_02847 75df79ad02164c40c57be98ea2c8cfc2 230 TIGRFAM TIGR03063 srtB_target: sortase B cell surface sorting signal 198 225 3.5E-11 T 14-10-2018 IPR017502 Sortase B cell surface sorting signal DB29_02847 75df79ad02164c40c57be98ea2c8cfc2 230 Pfam PF05031 Iron Transport-associated domain 30 145 2.1E-37 T 14-10-2018 IPR006635 NEAT domain DB29_02847 75df79ad02164c40c57be98ea2c8cfc2 230 SUPERFAMILY SSF158911 28 155 4.45E-41 T 14-10-2018 IPR037250 NEAT domain superfamily DB29_02847 75df79ad02164c40c57be98ea2c8cfc2 230 SMART SM00725 31 152 1.3E-44 T 14-10-2018 IPR006635 NEAT domain DB29_02847 75df79ad02164c40c57be98ea2c8cfc2 230 TIGRFAM TIGR03656 IsdC: heme uptake protein IsdC 8 227 2.2E-62 T 14-10-2018 IPR019909 Haem uptake protein IsdC GO:0009274|GO:0015886|GO:0030492 DB29_02847 75df79ad02164c40c57be98ea2c8cfc2 230 Gene3D G3DSA:2.60.40.1850 22 151 5.3E-43 T 14-10-2018 DB29_01131 7b92c9c500379880f71a01b8af9b8c0d 335 Pfam PF00814 Glycoprotease family 25 307 1.0E-98 T 14-10-2018 IPR000905 Gcp-like domain DB29_01131 7b92c9c500379880f71a01b8af9b8c0d 335 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 5 307 6.3E-105 T 14-10-2018 IPR017861 Kae1/TsaD family DB29_01131 7b92c9c500379880f71a01b8af9b8c0d 335 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 98 117 2.2E-48 T 14-10-2018 IPR017861 Kae1/TsaD family DB29_01131 7b92c9c500379880f71a01b8af9b8c0d 335 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 131 143 2.2E-48 T 14-10-2018 IPR017861 Kae1/TsaD family DB29_01131 7b92c9c500379880f71a01b8af9b8c0d 335 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 264 273 2.2E-48 T 14-10-2018 IPR017861 Kae1/TsaD family DB29_01131 7b92c9c500379880f71a01b8af9b8c0d 335 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 77 97 2.2E-48 T 14-10-2018 IPR017861 Kae1/TsaD family DB29_01131 7b92c9c500379880f71a01b8af9b8c0d 335 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 5 18 2.2E-48 T 14-10-2018 IPR017861 Kae1/TsaD family DB29_01131 7b92c9c500379880f71a01b8af9b8c0d 335 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 154 175 2.2E-48 T 14-10-2018 IPR017861 Kae1/TsaD family DB29_01131 7b92c9c500379880f71a01b8af9b8c0d 335 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 4 312 9.5E-129 T 14-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 DB29_01131 7b92c9c500379880f71a01b8af9b8c0d 335 ProSitePatterns PS01016 Glycoprotease family signature. 97 117 - T 14-10-2018 IPR017860 Peptidase M22, conserved site Reactome: R-HSA-6782315 DB29_01131 7b92c9c500379880f71a01b8af9b8c0d 335 Gene3D G3DSA:3.30.420.40 129 294 9.4E-120 T 14-10-2018 DB29_01131 7b92c9c500379880f71a01b8af9b8c0d 335 Gene3D G3DSA:3.30.420.40 4 314 9.4E-120 T 14-10-2018 DB29_01131 7b92c9c500379880f71a01b8af9b8c0d 335 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 2 332 61.154 T 14-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 DB29_01131 7b92c9c500379880f71a01b8af9b8c0d 335 SUPERFAMILY SSF53067 4 309 4.99E-40 T 14-10-2018 DB29_03579 bbab57a0f47c84ebb8ad8729e15d91e5 566 Pfam PF00501 AMP-binding enzyme 31 459 2.2E-116 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 DB29_03579 bbab57a0f47c84ebb8ad8729e15d91e5 566 Gene3D G3DSA:3.30.300.310 456 559 2.1E-32 T 14-10-2018 DB29_03579 bbab57a0f47c84ebb8ad8729e15d91e5 566 ProSitePatterns PS00455 Putative AMP-binding domain signature. 212 223 - T 14-10-2018 IPR020845 AMP-binding, conserved site DB29_03579 bbab57a0f47c84ebb8ad8729e15d91e5 566 Pfam PF13193 AMP-binding enzyme C-terminal domain 469 544 2.2E-20 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain DB29_03579 bbab57a0f47c84ebb8ad8729e15d91e5 566 Gene3D G3DSA:3.40.50.12780 12 451 1.6E-130 T 14-10-2018 DB29_03579 bbab57a0f47c84ebb8ad8729e15d91e5 566 SUPERFAMILY SSF56801 8 554 1.57E-162 T 14-10-2018 DB29_04086 3e0ab1a89989172859c13ad7ad354c7b 87 Gene3D G3DSA:3.30.110.20 1 86 1.8E-35 T 14-10-2018 IPR036882 Alba-like domain superfamily GO:0003676 DB29_04086 3e0ab1a89989172859c13ad7ad354c7b 87 ProDom PD061837 SPORULATION V STAGE S SPOVS-RELATED SPOVS CELL SEPTATION SPOVS3 RELATED 3 86 3.0E-33 T 14-10-2018 IPR007347 Sporulation stage V, protein S DB29_04086 3e0ab1a89989172859c13ad7ad354c7b 87 Pfam PF04232 Stage V sporulation protein S (SpoVS) 2 84 9.5E-40 T 14-10-2018 IPR007347 Sporulation stage V, protein S DB29_03344 e43f04aafe06e1208bf73e511ee8dc2e 281 Pfam PF01925 Sulfite exporter TauE/SafE 15 274 2.1E-52 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 DB29_01607 65281197ae376f1074ac16f4ea608b95 300 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 5 258 1.1E-55 T 14-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 DB29_01607 65281197ae376f1074ac16f4ea608b95 300 PIRSF PIRSF006470 1 298 6.1E-68 T 14-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 DB29_01607 65281197ae376f1074ac16f4ea608b95 300 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 6 280 2.8E-70 T 14-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 DB29_01607 65281197ae376f1074ac16f4ea608b95 300 Gene3D G3DSA:3.40.190.170 1 297 8.7E-84 T 14-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily DB29_02034 5a53b71c08f4ee7bac8320a786e7bc5d 352 Gene3D G3DSA:3.40.50.720 3 328 9.3E-97 T 14-10-2018 DB29_02034 5a53b71c08f4ee7bac8320a786e7bc5d 352 Gene3D G3DSA:3.30.360.10 160 321 9.3E-97 T 14-10-2018 DB29_02034 5a53b71c08f4ee7bac8320a786e7bc5d 352 SUPERFAMILY SSF51735 2 222 8.42E-23 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_02034 5a53b71c08f4ee7bac8320a786e7bc5d 352 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 7 151 3.6E-7 T 14-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 DB29_02034 5a53b71c08f4ee7bac8320a786e7bc5d 352 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 205 227 - T 14-10-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 DB29_02034 5a53b71c08f4ee7bac8320a786e7bc5d 352 PIRSF PIRSF036497 1 345 8.8E-101 T 14-10-2018 IPR022697 Homoserine dehydrogenase lacking ACT domain GO:0004412 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 DB29_02034 5a53b71c08f4ee7bac8320a786e7bc5d 352 Pfam PF00742 Homoserine dehydrogenase 160 337 1.7E-54 T 14-10-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 DB29_02034 5a53b71c08f4ee7bac8320a786e7bc5d 352 SUPERFAMILY SSF55347 160 324 9.15E-47 T 14-10-2018 DB29_01138 317293273f5a78cd31e48a51a9ff01cb 378 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 7 373 1.5E-111 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 DB29_01138 317293273f5a78cd31e48a51a9ff01cb 378 Gene3D G3DSA:3.40.640.10 2 251 2.4E-83 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DB29_01138 317293273f5a78cd31e48a51a9ff01cb 378 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 195 209 - T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 DB29_01138 317293273f5a78cd31e48a51a9ff01cb 378 PIRSF PIRSF001434 2 376 5.2E-118 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 DB29_01138 317293273f5a78cd31e48a51a9ff01cb 378 SUPERFAMILY SSF53383 25 374 1.46E-91 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DB29_01138 317293273f5a78cd31e48a51a9ff01cb 378 Gene3D G3DSA:3.90.1150.10 252 375 1.8E-28 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DB29_01918 2a4a55a6734e8d28e8c3587aa659dca8 220 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 36 212 6.3E-25 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 DB29_01918 2a4a55a6734e8d28e8c3587aa659dca8 220 SUPERFAMILY SSF88946 12 109 7.85E-24 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 DB29_01918 2a4a55a6734e8d28e8c3587aa659dca8 220 Pfam PF04542 Sigma-70 region 2 40 109 5.9E-14 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 DB29_01918 2a4a55a6734e8d28e8c3587aa659dca8 220 ProSitePatterns PS00622 LuxR-type HTH domain signature. 181 208 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DB29_01918 2a4a55a6734e8d28e8c3587aa659dca8 220 TIGRFAM TIGR02859 spore_sigH: RNA polymerase sigma-H factor 17 214 8.9E-109 T 14-10-2018 IPR014218 RNA polymerase sigma-H type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DB29_01918 2a4a55a6734e8d28e8c3587aa659dca8 220 PIRSF PIRSF002939 5 220 9.7E-110 T 14-10-2018 IPR016371 RNA polymerase sigma-H factor GO:0003677|GO:0006351|GO:0016987 DB29_01918 2a4a55a6734e8d28e8c3587aa659dca8 220 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 64 77 - T 14-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 DB29_01918 2a4a55a6734e8d28e8c3587aa659dca8 220 SUPERFAMILY SSF88659 127 213 2.75E-10 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like DB29_01918 2a4a55a6734e8d28e8c3587aa659dca8 220 Pfam PF08281 Sigma-70, region 4 167 209 1.5E-8 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DB29_03721 77e165f1a141cab13a581df7536af0a3 248 Pfam PF12227 Protein of unknown function (DUF3603) 35 248 6.6E-102 T 14-10-2018 IPR020909 UPF0736 DB29_03721 77e165f1a141cab13a581df7536af0a3 248 Hamap MF_01860 UPF0736 protein . 1 248 48.772 T 14-10-2018 IPR020909 UPF0736 DB29_00830 7b4ad8954891acfd269e0d85fd3310bc 118 Gene3D G3DSA:2.40.33.40 1 118 5.1E-31 T 14-10-2018 IPR036665 Phosphotransferase system, glucitol/sorbitol-specific IIA component superfamily GO:0005737|GO:0008982|GO:0009401 DB29_00830 7b4ad8954891acfd269e0d85fd3310bc 118 ProDom PD015842 PTS IIA COMPONENT GLUCITOL/SORBITOL-SPECIFIC SYSTEM ENZYME TRANSFERASE SYSTEM PHOSPHOTRANSFERASE EIIA 7 114 1.0E-54 T 14-10-2018 IPR004716 Phosphotransferase system, glucitol/sorbitol-specific IIA component GO:0005737|GO:0008982|GO:0009401 DB29_00830 7b4ad8954891acfd269e0d85fd3310bc 118 SUPERFAMILY SSF141530 1 116 1.01E-36 T 14-10-2018 IPR036665 Phosphotransferase system, glucitol/sorbitol-specific IIA component superfamily GO:0005737|GO:0008982|GO:0009401 DB29_00830 7b4ad8954891acfd269e0d85fd3310bc 118 Pfam PF03829 PTS system glucitol/sorbitol-specific IIA component 2 114 9.5E-39 T 14-10-2018 IPR004716 Phosphotransferase system, glucitol/sorbitol-specific IIA component GO:0005737|GO:0008982|GO:0009401 DB29_02974 58d81d07a987a96eb0416ca90d9c07e0 190 Gene3D G3DSA:2.60.120.10 102 189 1.1E-23 T 14-10-2018 IPR014710 RmlC-like jelly roll fold DB29_02974 58d81d07a987a96eb0416ca90d9c07e0 190 Gene3D G3DSA:1.10.260.40 1 80 5.7E-19 T 14-10-2018 DB29_02974 58d81d07a987a96eb0416ca90d9c07e0 190 Pfam PF01381 Helix-turn-helix 20 72 8.1E-14 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DB29_02974 58d81d07a987a96eb0416ca90d9c07e0 190 Pfam PF07883 Cupin domain 125 181 2.5E-9 T 14-10-2018 IPR013096 Cupin 2, conserved barrel DB29_02974 58d81d07a987a96eb0416ca90d9c07e0 190 SMART SM00530 19 74 2.2E-14 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DB29_02974 58d81d07a987a96eb0416ca90d9c07e0 190 SUPERFAMILY SSF47413 14 78 2.39E-17 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DB29_02974 58d81d07a987a96eb0416ca90d9c07e0 190 SUPERFAMILY SSF51182 60 187 7.29E-19 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily DB29_01735 50eebaa4f93ffa52faeb38a9bbb12f5f 356 TIGRFAM TIGR03814 Gln_ase: glutaminase A 57 356 1.8E-124 T 14-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 DB29_01735 50eebaa4f93ffa52faeb38a9bbb12f5f 356 SUPERFAMILY SSF56601 55 356 3.78E-115 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like DB29_01735 50eebaa4f93ffa52faeb38a9bbb12f5f 356 Pfam PF04960 Glutaminase 70 356 9.1E-114 T 14-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 DB29_01735 50eebaa4f93ffa52faeb38a9bbb12f5f 356 Hamap MF_00313 Glutaminase [glsA]. 52 356 46.701 T 14-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 DB29_01735 50eebaa4f93ffa52faeb38a9bbb12f5f 356 Gene3D G3DSA:3.40.710.10 51 356 3.4E-113 T 14-10-2018 DB29_00613 91049fdb2ec21a5ef3bb9b55a1bcdbe5 269 Gene3D G3DSA:3.40.50.1820 3 269 8.7E-59 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DB29_00613 91049fdb2ec21a5ef3bb9b55a1bcdbe5 269 SUPERFAMILY SSF53474 3 267 1.86E-42 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DB29_00613 91049fdb2ec21a5ef3bb9b55a1bcdbe5 269 Pfam PF12146 Serine aminopeptidase, S33 25 252 3.0E-68 T 14-10-2018 IPR022742 Serine aminopeptidase, S33 DB29_00613 91049fdb2ec21a5ef3bb9b55a1bcdbe5 269 PRINTS PR00111 Alpha/beta hydrolase fold signature 117 130 1.5E-6 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DB29_00613 91049fdb2ec21a5ef3bb9b55a1bcdbe5 269 PRINTS PR00111 Alpha/beta hydrolase fold signature 54 69 1.5E-6 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DB29_00613 91049fdb2ec21a5ef3bb9b55a1bcdbe5 269 PRINTS PR00111 Alpha/beta hydrolase fold signature 103 116 1.5E-6 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DB29_00613 91049fdb2ec21a5ef3bb9b55a1bcdbe5 269 PRINTS PR00111 Alpha/beta hydrolase fold signature 208 222 1.5E-6 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DB29_03726 fa0a82e8169dd47838354d842c1caa01 179 Gene3D G3DSA:1.10.3210.10 6 168 2.3E-17 T 14-10-2018 DB29_03726 fa0a82e8169dd47838354d842c1caa01 179 SUPERFAMILY SSF109604 18 137 6.73E-22 T 14-10-2018 DB29_03726 fa0a82e8169dd47838354d842c1caa01 179 Pfam PF01966 HD domain 25 137 6.2E-14 T 14-10-2018 IPR006674 HD domain DB29_03726 fa0a82e8169dd47838354d842c1caa01 179 SMART SM00471 19 148 2.7E-6 T 14-10-2018 IPR003607 HD/PDEase domain DB29_02620 011e98292bc2afd44ccaa5d96afc4c4f 336 ProSitePatterns PS00356 LacI-type HTH domain signature. 5 23 - T 14-10-2018 DB29_02620 011e98292bc2afd44ccaa5d96afc4c4f 336 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 4 14 1.5E-5 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DB29_02620 011e98292bc2afd44ccaa5d96afc4c4f 336 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 14 24 1.5E-5 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DB29_02620 011e98292bc2afd44ccaa5d96afc4c4f 336 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 49 2.3E-19 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DB29_02620 011e98292bc2afd44ccaa5d96afc4c4f 336 SMART SM00354 2 72 3.2E-27 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DB29_02620 011e98292bc2afd44ccaa5d96afc4c4f 336 SUPERFAMILY SSF47413 2 59 1.3E-17 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DB29_02620 011e98292bc2afd44ccaa5d96afc4c4f 336 Gene3D G3DSA:1.10.260.40 1 60 4.4E-23 T 14-10-2018 DB29_02620 011e98292bc2afd44ccaa5d96afc4c4f 336 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 61 308 8.4E-28 T 14-10-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain DB29_02620 011e98292bc2afd44ccaa5d96afc4c4f 336 SUPERFAMILY SSF53822 62 331 2.55E-57 T 14-10-2018 IPR028082 Periplasmic binding protein-like I DB29_02620 011e98292bc2afd44ccaa5d96afc4c4f 336 Gene3D G3DSA:3.40.50.2300 159 290 1.4E-62 T 14-10-2018 DB29_02620 011e98292bc2afd44ccaa5d96afc4c4f 336 Gene3D G3DSA:3.40.50.2300 63 308 1.4E-62 T 14-10-2018 DB29_03581 c8fe228981007cb474da60a0feaa6449 256 Gene3D G3DSA:3.90.226.10 1 256 3.8E-91 T 14-10-2018 DB29_03581 c8fe228981007cb474da60a0feaa6449 256 Pfam PF00378 Enoyl-CoA hydratase/isomerase 9 255 2.6E-67 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 DB29_03581 c8fe228981007cb474da60a0feaa6449 256 SUPERFAMILY SSF52096 3 256 1.05E-84 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily DB29_03581 c8fe228981007cb474da60a0feaa6449 256 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 98 118 - T 14-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 DB29_03899 f8cebe7d0898f7a5a650ce94cc02965f 350 SMART SM00228 120 187 7.2E-6 T 14-10-2018 IPR001478 PDZ domain GO:0005515 DB29_03899 f8cebe7d0898f7a5a650ce94cc02965f 350 SUPERFAMILY SSF50156 129 200 2.89E-16 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 DB29_03899 f8cebe7d0898f7a5a650ce94cc02965f 350 SUPERFAMILY SSF54211 232 339 6.07E-23 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DB29_03899 f8cebe7d0898f7a5a650ce94cc02965f 350 Gene3D G3DSA:3.30.230.10 220 347 1.6E-19 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DB29_03899 f8cebe7d0898f7a5a650ce94cc02965f 350 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 235 337 1.8E-11 T 14-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 DB29_03899 f8cebe7d0898f7a5a650ce94cc02965f 350 Pfam PF13180 PDZ domain 129 188 1.2E-10 T 14-10-2018 IPR001478 PDZ domain GO:0005515 DB29_03899 f8cebe7d0898f7a5a650ce94cc02965f 350 Gene3D G3DSA:2.30.42.10 123 219 1.6E-21 T 14-10-2018 DB29_02903 8b8bb8b1d2ce89a06925ac77330bd25e 209 SMART SM00448 2 115 2.1E-29 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DB29_02903 8b8bb8b1d2ce89a06925ac77330bd25e 209 Pfam PF00072 Response regulator receiver domain 4 115 4.7E-27 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DB29_02903 8b8bb8b1d2ce89a06925ac77330bd25e 209 SUPERFAMILY SSF52172 1 132 6.4E-33 T 14-10-2018 IPR011006 CheY-like superfamily DB29_02903 8b8bb8b1d2ce89a06925ac77330bd25e 209 ProSitePatterns PS00622 LuxR-type HTH domain signature. 161 188 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DB29_02903 8b8bb8b1d2ce89a06925ac77330bd25e 209 SMART SM00421 144 201 5.8E-27 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DB29_02903 8b8bb8b1d2ce89a06925ac77330bd25e 209 Gene3D G3DSA:3.40.50.12740 2 207 1.4E-72 T 14-10-2018 DB29_02903 8b8bb8b1d2ce89a06925ac77330bd25e 209 SUPERFAMILY SSF46894 139 206 1.09E-21 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DB29_02903 8b8bb8b1d2ce89a06925ac77330bd25e 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 177 189 5.5E-15 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DB29_02903 8b8bb8b1d2ce89a06925ac77330bd25e 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 161 177 5.5E-15 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DB29_02903 8b8bb8b1d2ce89a06925ac77330bd25e 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 147 161 5.5E-15 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DB29_02903 8b8bb8b1d2ce89a06925ac77330bd25e 209 Pfam PF00196 Bacterial regulatory proteins, luxR family 146 201 1.4E-20 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DB29_01976 25da6941d2bab014b280137c1daef387 98 Hamap MF_00819 Putative septation protein SpoVG [spoVG]. 1 92 28.626 T 14-10-2018 IPR007170 Stage V sporulation protein G GO:0030435 DB29_01976 25da6941d2bab014b280137c1daef387 98 Pfam PF04026 SpoVG 1 81 2.0E-35 T 14-10-2018 IPR007170 Stage V sporulation protein G GO:0030435 DB29_01976 25da6941d2bab014b280137c1daef387 98 SUPERFAMILY SSF160537 1 86 1.29E-32 T 14-10-2018 IPR036751 Stage V sporulation protein G superfamily GO:0030435 DB29_01976 25da6941d2bab014b280137c1daef387 98 Gene3D G3DSA:3.30.1120.40 1 98 5.1E-37 T 14-10-2018 IPR036751 Stage V sporulation protein G superfamily GO:0030435 DB29_02261 59dbd2d2d63b556dc28a8835b31f15d3 270 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 6 261 2.0E-86 T 14-10-2018 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 DB29_02261 59dbd2d2d63b556dc28a8835b31f15d3 270 SUPERFAMILY SSF53613 5 265 1.71E-76 T 14-10-2018 IPR029056 Ribokinase-like DB29_02261 59dbd2d2d63b556dc28a8835b31f15d3 270 Pfam PF08543 Phosphomethylpyrimidine kinase 13 259 1.8E-89 T 14-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 DB29_02261 59dbd2d2d63b556dc28a8835b31f15d3 270 Gene3D G3DSA:3.40.1190.20 3 270 2.7E-90 T 14-10-2018 IPR029056 Ribokinase-like DB29_00466 18b726a66cf8a40bb0ab103dcbff04e0 172 Pfam PF08955 BofC C-terminal domain 101 170 1.0E-20 T 14-10-2018 IPR015050 Bypass of forespore C, C-terminal DB29_00466 18b726a66cf8a40bb0ab103dcbff04e0 172 Gene3D G3DSA:3.30.70.1740 100 172 2.4E-12 T 14-10-2018 IPR038117 Bypass of forespore C, C-terminal domain superfamily DB29_00466 18b726a66cf8a40bb0ab103dcbff04e0 172 Gene3D G3DSA:3.10.20.420 45 99 4.9E-23 T 14-10-2018 IPR038118 Bypass-of-forespore C, N-terminal domain superfamily DB29_00466 18b726a66cf8a40bb0ab103dcbff04e0 172 Pfam PF08977 Bypass of Forespore C, N terminal 49 98 2.2E-23 T 14-10-2018 IPR015071 Bypass-of-forespore C, N-terminal DB29_01884 3a2b88c7600b24d9d1796cbf49bf1af0 62 Pfam PF00327 Ribosomal protein L30p/L7e 6 55 7.3E-20 T 14-10-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain DB29_01884 3a2b88c7600b24d9d1796cbf49bf1af0 62 SUPERFAMILY SSF55129 3 61 1.16E-20 T 14-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily DB29_01884 3a2b88c7600b24d9d1796cbf49bf1af0 62 ProSitePatterns PS00634 Ribosomal protein L30 signature. 23 55 - T 14-10-2018 IPR018038 Ribosomal protein L30, conserved site DB29_01884 3a2b88c7600b24d9d1796cbf49bf1af0 62 PIRSF PIRSF002211 1 61 1.0E-28 T 14-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB29_01884 3a2b88c7600b24d9d1796cbf49bf1af0 62 Gene3D G3DSA:3.30.1390.20 1 59 1.8E-26 T 14-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily DB29_01884 3a2b88c7600b24d9d1796cbf49bf1af0 62 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 5 59 4.8E-26 T 14-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB29_01884 3a2b88c7600b24d9d1796cbf49bf1af0 62 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 2 59 19.625 T 14-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB29_0P0007 059a6be37065857d6b61e1a8ee9937ff 50 SUPERFAMILY SSF140500 3 45 1.7E-13 T 14-10-2018 IPR037208 Aspartyl-phosphate phosphatase Spo0E-like superfamily GO:0043937 DB29_0P0007 059a6be37065857d6b61e1a8ee9937ff 50 Pfam PF09388 Spo0E like sporulation regulatory protein 3 44 7.7E-16 T 14-10-2018 IPR018540 Aspartyl-phosphate phosphatase Spo0E-like GO:0043937 DB29_0P0007 059a6be37065857d6b61e1a8ee9937ff 50 Gene3D G3DSA:1.20.58.990 1 50 2.9E-14 T 14-10-2018 IPR037208 Aspartyl-phosphate phosphatase Spo0E-like superfamily GO:0043937 DB29_03496 ed6b152314020baed521c02a550b959f 211 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 9 22 4.0E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DB29_03496 ed6b152314020baed521c02a550b959f 211 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 30 53 4.0E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DB29_03496 ed6b152314020baed521c02a550b959f 211 SUPERFAMILY SSF46689 3 74 4.16E-18 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DB29_03496 ed6b152314020baed521c02a550b959f 211 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 54 1.0E-16 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DB29_03496 ed6b152314020baed521c02a550b959f 211 ProSitePatterns PS01081 TetR-type HTH domain signature. 21 51 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site DB29_03496 ed6b152314020baed521c02a550b959f 211 Gene3D G3DSA:1.10.357.10 1 204 3.3E-38 T 14-10-2018 DB29_03058 5480a931a95cce731979e86659eea1d8 304 Gene3D G3DSA:3.40.50.150 2 303 7.4E-49 T 14-10-2018 DB29_03058 5480a931a95cce731979e86659eea1d8 304 Pfam PF04072 Leucine carboxyl methyltransferase 11 205 1.1E-47 T 14-10-2018 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp GO:0008168|GO:0032259 DB29_03058 5480a931a95cce731979e86659eea1d8 304 TIGRFAM TIGR00027 mthyl_TIGR00027: methyltransferase, TIGR00027 family 9 284 7.7E-42 T 14-10-2018 IPR011610 S-adenosyl-L-methionine-dependent methyltransferase, putative GO:0008168 DB29_03058 5480a931a95cce731979e86659eea1d8 304 SUPERFAMILY SSF53335 6 303 2.27E-63 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DB29_02820 c666cb1ee6341f80ec7785226e2402d3 207 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 37 204 7.4E-55 T 14-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 DB29_02820 c666cb1ee6341f80ec7785226e2402d3 207 SMART SM00646 95 204 3.3E-42 T 14-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 DB29_02820 c666cb1ee6341f80ec7785226e2402d3 207 SUPERFAMILY SSF53187 35 206 1.51E-58 T 14-10-2018 DB29_02820 c666cb1ee6341f80ec7785226e2402d3 207 Gene3D G3DSA:3.40.630.40 33 207 4.9E-65 T 14-10-2018 DB29_00957 d814a2eaa0a9595894c7f46e62e6cf85 470 SUPERFAMILY SSF53271 246 464 5.77E-75 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like DB29_00957 d814a2eaa0a9595894c7f46e62e6cf85 470 SUPERFAMILY SSF56235 12 235 1.97E-70 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DB29_00957 d814a2eaa0a9595894c7f46e62e6cf85 470 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 11 455 47.095 T 14-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 DB29_00957 d814a2eaa0a9595894c7f46e62e6cf85 470 Gene3D G3DSA:3.40.50.2020 270 434 7.9E-169 T 14-10-2018 DB29_00957 d814a2eaa0a9595894c7f46e62e6cf85 470 Pfam PF00156 Phosphoribosyl transferase domain 280 381 1.5E-6 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 DB29_00957 d814a2eaa0a9595894c7f46e62e6cf85 470 PIRSF PIRSF000485 8 470 3.8E-186 T 14-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 DB29_00957 d814a2eaa0a9595894c7f46e62e6cf85 470 Gene3D G3DSA:3.60.20.10 12 457 7.9E-169 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DB29_00957 d814a2eaa0a9595894c7f46e62e6cf85 470 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 12 456 1.6E-170 T 14-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 DB29_00957 d814a2eaa0a9595894c7f46e62e6cf85 470 Pfam PF13522 Glutamine amidotransferase domain 73 204 8.5E-23 T 14-10-2018 DB29_03405 322b28cf57c41c1bdcda1805ba00dd50 165 Pfam PF07301 Protein of unknown function (DUF1453) 11 153 1.0E-55 T 14-10-2018 IPR009916 Protein of unknown function DUF1453 DB29_03405 322b28cf57c41c1bdcda1805ba00dd50 165 PIRSF PIRSF021441 3 165 1.5E-67 T 14-10-2018 IPR031306 CcdC protein DB29_02387 6eeec8ce66ad43767197bb33af6f48f7 231 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 30 230 2.0E-71 T 14-10-2018 IPR005702 Exopolysaccharide synthesis protein GO:0045226 DB29_02387 6eeec8ce66ad43767197bb33af6f48f7 231 Pfam PF13614 AAA domain 59 193 4.4E-15 T 14-10-2018 IPR025669 AAA domain DB29_02387 6eeec8ce66ad43767197bb33af6f48f7 231 Gene3D G3DSA:3.40.50.300 1 231 7.8E-75 T 14-10-2018 DB29_02387 6eeec8ce66ad43767197bb33af6f48f7 231 SUPERFAMILY SSF52540 50 224 7.21E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_01830 90bb17662bb550d43f3b1f0de606b571 198 SUPERFAMILY SSF52266 1 186 8.18E-44 T 14-10-2018 DB29_01830 90bb17662bb550d43f3b1f0de606b571 198 Gene3D G3DSA:3.40.50.1110 1 187 5.3E-49 T 14-10-2018 IPR036514 SGNH hydrolase superfamily DB29_01830 90bb17662bb550d43f3b1f0de606b571 198 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 5 174 2.2E-31 T 14-10-2018 IPR013830 SGNH hydrolase-type esterase domain DB29_04342 6dd4d0bd042a0bdb53a0ea5678395498 320 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 161 274 1.5E-15 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain DB29_04342 6dd4d0bd042a0bdb53a0ea5678395498 320 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 9 108 3.5E-12 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain DB29_04342 6dd4d0bd042a0bdb53a0ea5678395498 320 Gene3D G3DSA:3.10.180.10 8 313 4.6E-116 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DB29_04342 6dd4d0bd042a0bdb53a0ea5678395498 320 SUPERFAMILY SSF54593 1 290 1.33E-50 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DB29_04342 6dd4d0bd042a0bdb53a0ea5678395498 320 Gene3D G3DSA:3.10.180.10 68 218 4.6E-116 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DB29_02994 f980912cf5533b8b24f28b6930e23bac 370 Gene3D G3DSA:3.40.50.720 9 334 1.9E-98 T 14-10-2018 DB29_02994 f980912cf5533b8b24f28b6930e23bac 370 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 6 128 9.3E-31 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 DB29_02994 f980912cf5533b8b24f28b6930e23bac 370 SUPERFAMILY SSF55347 137 338 8.67E-26 T 14-10-2018 DB29_02994 f980912cf5533b8b24f28b6930e23bac 370 SUPERFAMILY SSF51735 3 186 5.59E-57 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_02994 f980912cf5533b8b24f28b6930e23bac 370 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 140 218 5.0E-9 T 14-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 DB29_02994 f980912cf5533b8b24f28b6930e23bac 370 Gene3D G3DSA:3.30.360.10 133 356 1.9E-98 T 14-10-2018 DB29_00318 53b33c560b94e2d2b4a37c3eb5e1db7f 214 SUPERFAMILY SSF46785 5 79 2.8E-13 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_00318 53b33c560b94e2d2b4a37c3eb5e1db7f 214 PIRSF PIRSF026546 4 212 1.5E-103 T 14-10-2018 IPR016842 Protein of unknown function UCP026546, HtH-CBS DB29_00318 53b33c560b94e2d2b4a37c3eb5e1db7f 214 SMART SM00116 153 206 4.7E-4 T 14-10-2018 IPR000644 CBS domain DB29_00318 53b33c560b94e2d2b4a37c3eb5e1db7f 214 SMART SM00116 86 134 0.083 T 14-10-2018 IPR000644 CBS domain DB29_00318 53b33c560b94e2d2b4a37c3eb5e1db7f 214 Pfam PF08279 HTH domain 9 61 3.7E-11 T 14-10-2018 IPR013196 Helix-turn-helix, type 11 DB29_00318 53b33c560b94e2d2b4a37c3eb5e1db7f 214 Gene3D G3DSA:1.10.10.10 2 63 2.6E-7 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_00318 53b33c560b94e2d2b4a37c3eb5e1db7f 214 SUPERFAMILY SSF54631 72 207 3.03E-21 T 14-10-2018 DB29_00318 53b33c560b94e2d2b4a37c3eb5e1db7f 214 Pfam PF00571 CBS domain 147 206 9.7E-6 T 14-10-2018 IPR000644 CBS domain DB29_00318 53b33c560b94e2d2b4a37c3eb5e1db7f 214 Pfam PF00571 CBS domain 85 134 2.8E-5 T 14-10-2018 IPR000644 CBS domain DB29_00318 53b33c560b94e2d2b4a37c3eb5e1db7f 214 Gene3D G3DSA:3.10.580.10 64 214 2.4E-54 T 14-10-2018 DB29_00277 84f0313ff02a0352c1d23add14b31ae1 437 TIGRFAM TIGR00931 antiport_nhaC: Na+/H+ antiporter NhaC 1 427 1.2E-153 T 14-10-2018 IPR004770 Na+/H+ antiporter NhaC GO:0015297|GO:0016021 DB29_00277 84f0313ff02a0352c1d23add14b31ae1 437 Pfam PF03553 Na+/H+ antiporter family 133 424 6.3E-60 T 14-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 DB29_00535 bdfe33c46ee82949e49cb43d6c186116 247 Pfam PF00881 Nitroreductase family 11 164 1.0E-20 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 DB29_00535 bdfe33c46ee82949e49cb43d6c186116 247 Gene3D G3DSA:3.40.109.10 3 246 5.3E-77 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 DB29_00535 bdfe33c46ee82949e49cb43d6c186116 247 SUPERFAMILY SSF55469 4 244 4.84E-74 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 DB29_00535 bdfe33c46ee82949e49cb43d6c186116 247 PIRSF PIRSF005426 2 246 5.1E-93 T 14-10-2018 IPR016446 Flavin oxidoreductase Frp family GO:0016491|GO:0055114 DB29_02078 07f4ecc8cb962ad3691bc79846731eaa 77 ProSitePatterns PS00057 Ribosomal protein S18 signature. 23 46 - T 14-10-2018 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB29_02078 07f4ecc8cb962ad3691bc79846731eaa 77 Pfam PF01084 Ribosomal protein S18 19 70 1.7E-28 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB29_02078 07f4ecc8cb962ad3691bc79846731eaa 77 TIGRFAM TIGR00165 S18: ribosomal protein bS18 8 75 2.0E-37 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB29_02078 07f4ecc8cb962ad3691bc79846731eaa 77 SUPERFAMILY SSF46911 2 75 5.62E-32 T 14-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB29_02078 07f4ecc8cb962ad3691bc79846731eaa 77 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 4 75 23.242 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB29_02078 07f4ecc8cb962ad3691bc79846731eaa 77 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 22 75 2.0E-24 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB29_02078 07f4ecc8cb962ad3691bc79846731eaa 77 Gene3D G3DSA:4.10.640.10 1 76 1.5E-32 T 14-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB29_02078 07f4ecc8cb962ad3691bc79846731eaa 77 PRINTS PR00974 Ribosomal protein S18 family signature 30 40 5.6E-22 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB29_02078 07f4ecc8cb962ad3691bc79846731eaa 77 PRINTS PR00974 Ribosomal protein S18 family signature 48 62 5.6E-22 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB29_02078 07f4ecc8cb962ad3691bc79846731eaa 77 PRINTS PR00974 Ribosomal protein S18 family signature 40 47 5.6E-22 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB29_02078 07f4ecc8cb962ad3691bc79846731eaa 77 PRINTS PR00974 Ribosomal protein S18 family signature 62 72 5.6E-22 T 14-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB29_02011 aadedce1c36887aa14c24cf375c7bab7 349 Gene3D G3DSA:3.90.180.10 14 336 2.9E-137 T 14-10-2018 DB29_02011 aadedce1c36887aa14c24cf375c7bab7 349 SUPERFAMILY SSF51735 147 313 5.74E-47 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_02011 aadedce1c36887aa14c24cf375c7bab7 349 Pfam PF00107 Zinc-binding dehydrogenase 184 309 7.8E-32 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 DB29_02011 aadedce1c36887aa14c24cf375c7bab7 349 SMART SM00829 17 343 9.9E-7 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 DB29_02011 aadedce1c36887aa14c24cf375c7bab7 349 Gene3D G3DSA:3.40.50.720 157 294 2.9E-137 T 14-10-2018 DB29_02011 aadedce1c36887aa14c24cf375c7bab7 349 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 35 143 5.6E-37 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 DB29_02011 aadedce1c36887aa14c24cf375c7bab7 349 SUPERFAMILY SSF50129 8 343 1.77E-60 T 14-10-2018 IPR011032 GroES-like superfamily DB29_02011 aadedce1c36887aa14c24cf375c7bab7 349 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 69 83 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 DB29_00457 2ba5b3099ee2bbcca92a8a45ee91c3ba 79 ProDom PD710533 YODI TRANSMEMBRANE MEMBRANE 6 46 4.0E-16 T 14-10-2018 DB29_03993 1a0d2b05135bc8ea374d506e9110dfc3 259 Pfam PF01351 Ribonuclease HII 72 246 3.9E-38 T 14-10-2018 IPR024567 Ribonuclease HII/HIII domain DB29_03993 1a0d2b05135bc8ea374d506e9110dfc3 259 SUPERFAMILY SSF53098 59 250 1.97E-67 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily DB29_03993 1a0d2b05135bc8ea374d506e9110dfc3 259 Hamap MF_00052_B Ribonuclease HII [rnhB]. 70 248 35.411 T 14-10-2018 IPR022898 Ribonuclease HII GO:0004523 DB29_03993 1a0d2b05135bc8ea374d506e9110dfc3 259 Gene3D G3DSA:3.30.420.10 46 256 1.2E-76 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 DB29_01631 f7faa65ee093fbd385d800fd5762b7f6 117 Pfam PF00893 Small Multidrug Resistance protein 4 92 2.4E-13 T 14-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 DB29_01631 f7faa65ee093fbd385d800fd5762b7f6 117 Gene3D G3DSA:1.10.3730.20 2 107 5.6E-18 T 14-10-2018 DB29_01631 f7faa65ee093fbd385d800fd5762b7f6 117 SUPERFAMILY SSF103481 8 105 8.24E-13 T 14-10-2018 DB29_03831 9c6e03653c10719e0ebd827741a6915f 362 TIGRFAM TIGR02872 spore_ytvI: sporulation integral membrane protein YtvI 7 347 8.8E-118 T 14-10-2018 IPR014227 Putative transport protein YtvI-like DB29_03831 9c6e03653c10719e0ebd827741a6915f 362 PRINTS PR00303 Preprotein translocase SecY subunit signature 68 88 9.4E-5 T 14-10-2018 DB29_03831 9c6e03653c10719e0ebd827741a6915f 362 PRINTS PR00303 Preprotein translocase SecY subunit signature 250 269 9.4E-5 T 14-10-2018 DB29_03831 9c6e03653c10719e0ebd827741a6915f 362 PRINTS PR00303 Preprotein translocase SecY subunit signature 14 32 9.4E-5 T 14-10-2018 DB29_03831 9c6e03653c10719e0ebd827741a6915f 362 Pfam PF01594 AI-2E family transporter 11 344 2.7E-47 T 14-10-2018 IPR002549 Transmembrane protein TqsA-like DB29_04128 06496288fae2190509e8198bf664ee4d 483 Pfam PF05598 Transposase domain (DUF772) 52 127 3.4E-23 T 14-10-2018 IPR008490 Transposase InsH, N-terminal DB29_04128 06496288fae2190509e8198bf664ee4d 483 Pfam PF13751 Transposase DDE domain 322 439 1.8E-26 T 14-10-2018 IPR025668 Transposase DDE domain DB29_02251 a01b5f0b2b453af77d93d3b3c1ba427a 158 Gene3D G3DSA:3.40.630.30 1 144 9.9E-28 T 14-10-2018 DB29_02251 a01b5f0b2b453af77d93d3b3c1ba427a 158 SUPERFAMILY SSF55729 1 138 2.87E-27 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase DB29_02251 a01b5f0b2b453af77d93d3b3c1ba427a 158 Pfam PF00583 Acetyltransferase (GNAT) family 38 131 1.5E-13 T 14-10-2018 IPR000182 GNAT domain DB29_02315 c7611507eb93a939ef76e44a5e354d9e 120 SUPERFAMILY SSF52172 3 119 1.57E-38 T 14-10-2018 IPR011006 CheY-like superfamily DB29_02315 c7611507eb93a939ef76e44a5e354d9e 120 SMART SM00448 3 114 2.7E-36 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DB29_02315 c7611507eb93a939ef76e44a5e354d9e 120 Pfam PF00072 Response regulator receiver domain 5 114 1.4E-31 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DB29_02315 c7611507eb93a939ef76e44a5e354d9e 120 Gene3D G3DSA:3.40.50.2300 1 120 5.2E-41 T 14-10-2018 DB29_03910 6dffcf6c3ac63ccf42fae82085fe3488 762 Gene3D G3DSA:3.30.70.2110 79 161 6.0E-38 T 14-10-2018 DB29_03910 6dffcf6c3ac63ccf42fae82085fe3488 762 Pfam PF03793 PASTA domain 596 646 1.3E-4 T 14-10-2018 IPR005543 PASTA domain DB29_03910 6dffcf6c3ac63ccf42fae82085fe3488 762 SUPERFAMILY SSF56519 55 234 5.23E-35 T 14-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 DB29_03910 6dffcf6c3ac63ccf42fae82085fe3488 762 SUPERFAMILY SSF54184 592 648 1.27E-9 T 14-10-2018 DB29_03910 6dffcf6c3ac63ccf42fae82085fe3488 762 Gene3D G3DSA:3.90.1310.10 60 202 6.0E-38 T 14-10-2018 DB29_03910 6dffcf6c3ac63ccf42fae82085fe3488 762 Pfam PF03717 Penicillin-binding Protein dimerisation domain 59 207 1.5E-17 T 14-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 DB29_03910 6dffcf6c3ac63ccf42fae82085fe3488 762 Gene3D G3DSA:3.40.710.10 229 580 5.1E-100 T 14-10-2018 DB29_03910 6dffcf6c3ac63ccf42fae82085fe3488 762 Pfam PF00905 Penicillin binding protein transpeptidase domain 261 570 3.6E-80 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 DB29_03910 6dffcf6c3ac63ccf42fae82085fe3488 762 SUPERFAMILY SSF56601 189 581 2.73E-90 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like DB29_03910 6dffcf6c3ac63ccf42fae82085fe3488 762 SUPERFAMILY SSF54184 649 697 8.37E-11 T 14-10-2018 DB29_03910 6dffcf6c3ac63ccf42fae82085fe3488 762 Gene3D G3DSA:2.20.70.70 55 217 6.0E-38 T 14-10-2018 DB29_03910 6dffcf6c3ac63ccf42fae82085fe3488 762 SMART SM00740 649 705 2.0 T 14-10-2018 IPR005543 PASTA domain DB29_03910 6dffcf6c3ac63ccf42fae82085fe3488 762 SMART SM00740 591 648 0.005 T 14-10-2018 IPR005543 PASTA domain DB29_00041 59048bc8d10fe0b82d3076243544b27a 332 SUPERFAMILY SSF51679 7 326 4.59E-82 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 DB29_00041 59048bc8d10fe0b82d3076243544b27a 332 Pfam PF00296 Luciferase-like monooxygenase 22 298 3.3E-41 T 14-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 DB29_00041 59048bc8d10fe0b82d3076243544b27a 332 Gene3D G3DSA:3.20.20.30 2 332 3.1E-97 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 DB29_00041 59048bc8d10fe0b82d3076243544b27a 332 TIGRFAM TIGR03558 oxido_grp_1: luciferase family oxidoreductase, group 1 7 326 8.7E-133 T 14-10-2018 IPR019949 Luciferase family oxidoreductase, group 1 DB29_01036 c0b32f5bda2159bca695d3679d07f616 325 SUPERFAMILY SSF82549 1 324 3.66E-122 T 14-10-2018 DB29_01036 c0b32f5bda2159bca695d3679d07f616 325 Gene3D G3DSA:3.30.1180.20 181 324 4.1E-46 T 14-10-2018 DB29_01036 c0b32f5bda2159bca695d3679d07f616 325 Gene3D G3DSA:3.40.50.10440 12 180 8.8E-69 T 14-10-2018 DB29_01036 c0b32f5bda2159bca695d3679d07f616 325 TIGRFAM TIGR02363 dhaK1: dihydroxyacetone kinase, DhaK subunit 1 323 2.4E-132 T 14-10-2018 IPR012736 Dihydroxyacetone kinase DhaK, subunit 1 KEGG: 00561+2.7.1.121 DB29_01036 c0b32f5bda2159bca695d3679d07f616 325 Pfam PF02733 Dak1 domain 18 320 1.2E-119 T 14-10-2018 IPR004006 DhaK domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 DB29_02192 614fab9d4e38fdae192305eeb1d9e281 232 SUPERFAMILY SSF52172 3 126 1.57E-29 T 14-10-2018 IPR011006 CheY-like superfamily DB29_02192 614fab9d4e38fdae192305eeb1d9e281 232 Gene3D G3DSA:3.40.50.2300 1 139 6.1E-27 T 14-10-2018 DB29_02192 614fab9d4e38fdae192305eeb1d9e281 232 SMART SM00448 2 115 2.4E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DB29_02192 614fab9d4e38fdae192305eeb1d9e281 232 SUPERFAMILY SSF46785 149 223 6.97E-7 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_02192 614fab9d4e38fdae192305eeb1d9e281 232 Pfam PF00072 Response regulator receiver domain 4 115 4.7E-21 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DB29_02192 614fab9d4e38fdae192305eeb1d9e281 232 PIRSF PIRSF006171 1 223 5.1E-69 T 14-10-2018 IPR024187 Signal transduction response regulator, citrate/malate metabolism GO:0000160|GO:0003700 DB29_02000 5c4e092a5b850aa9477c5d143c769b5e 87 SUPERFAMILY SSF82771 4 73 1.31E-13 T 14-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 DB29_02000 5c4e092a5b850aa9477c5d143c769b5e 87 Gene3D G3DSA:3.40.1440.10 1 86 8.6E-35 T 14-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 DB29_02000 5c4e092a5b850aa9477c5d143c769b5e 87 Pfam PF01541 GIY-YIG catalytic domain 3 72 9.2E-19 T 14-10-2018 IPR000305 GIY-YIG endonuclease DB29_04194 b33a6134d6e49efc47f10f232af948d3 162 Pfam PF12728 Helix-turn-helix domain 19 67 1.8E-8 T 14-10-2018 DB29_01908 a4ff58951e17c6baef29d94330fec0a5 83 Gene3D G3DSA:3.30.1330.30 2 81 4.7E-19 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like DB29_01908 a4ff58951e17c6baef29d94330fec0a5 83 Pfam PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 7 80 2.7E-9 T 14-10-2018 IPR004038 Ribosomal protein L7Ae/L30e/S12e/Gadd45 DB29_01908 a4ff58951e17c6baef29d94330fec0a5 83 SUPERFAMILY SSF55315 5 82 4.99E-15 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like DB29_00567 6ae49b050a4223d12fb7fbe7bab36e36 383 Pfam PF13646 HEAT repeats 300 373 3.0E-10 T 14-10-2018 DB29_00567 6ae49b050a4223d12fb7fbe7bab36e36 383 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 12 342 8.2E-121 T 14-10-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 DB29_00567 6ae49b050a4223d12fb7fbe7bab36e36 383 Gene3D G3DSA:1.25.10.10 293 380 2.7E-8 T 14-10-2018 IPR011989 Armadillo-like helical DB29_00567 6ae49b050a4223d12fb7fbe7bab36e36 383 SUPERFAMILY SSF46548 136 250 2.35E-13 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 DB29_00567 6ae49b050a4223d12fb7fbe7bab36e36 383 SUPERFAMILY SSF48371 264 373 4.11E-10 T 14-10-2018 IPR016024 Armadillo-type fold DB29_00567 6ae49b050a4223d12fb7fbe7bab36e36 383 Pfam PF13484 4Fe-4S double cluster binding domain 188 250 1.2E-16 T 14-10-2018 DB29_00567 6ae49b050a4223d12fb7fbe7bab36e36 383 SMART SM00567 E-Z type HEAT repeats 298 327 79.0 T 14-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 DB29_00567 6ae49b050a4223d12fb7fbe7bab36e36 383 SMART SM00567 E-Z type HEAT repeats 330 360 6.8 T 14-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 DB29_00567 6ae49b050a4223d12fb7fbe7bab36e36 383 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 188 199 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DB29_00567 6ae49b050a4223d12fb7fbe7bab36e36 383 Pfam PF08331 Domain of unknown function (DUF1730) 57 135 5.7E-18 T 14-10-2018 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700 DB29_00856 6cc2392b613a2a8236e871e360c7d1ec 304 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 82 298 1.8E-9 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DB29_00856 6cc2392b613a2a8236e871e360c7d1ec 304 SUPERFAMILY SSF161098 15 303 4.84E-58 T 14-10-2018 IPR035906 MetI-like superfamily DB29_00856 6cc2392b613a2a8236e871e360c7d1ec 304 Gene3D G3DSA:1.10.3720.10 8 295 1.9E-72 T 14-10-2018 IPR035906 MetI-like superfamily DB29_02218 5d65adfde9d16e7f254fc409e3817732 216 Gene3D G3DSA:3.30.240.20 155 214 1.7E-10 T 14-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily DB29_02218 5d65adfde9d16e7f254fc409e3817732 216 Gene3D G3DSA:3.30.240.20 80 154 4.2E-24 T 14-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily DB29_02218 5d65adfde9d16e7f254fc409e3817732 216 Pfam PF04239 Protein of unknown function (DUF421) 89 190 9.7E-29 T 14-10-2018 IPR007353 Protein of unknown function DUF421 DB29_03591 507b08b994ee732e7575272f27d8be9f 151 Gene3D G3DSA:3.10.129.10 6 147 9.9E-38 T 14-10-2018 DB29_03591 507b08b994ee732e7575272f27d8be9f 151 SUPERFAMILY SSF54637 15 145 4.67E-35 T 14-10-2018 IPR029069 HotDog domain superfamily DB29_03591 507b08b994ee732e7575272f27d8be9f 151 Pfam PF03061 Thioesterase superfamily 33 114 2.4E-14 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 DB29_01860 47362ba061a95d1de247e0e16523a89b 243 SMART SM00646 117 228 1.5E-35 T 14-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 DB29_01860 47362ba061a95d1de247e0e16523a89b 243 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 44 228 2.6E-51 T 14-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 DB29_01860 47362ba061a95d1de247e0e16523a89b 243 SUPERFAMILY SSF53187 42 231 2.95E-52 T 14-10-2018 DB29_01860 47362ba061a95d1de247e0e16523a89b 243 TIGRFAM TIGR02883 spore_cwlD: N-acetylmuramoyl-L-alanine amidase CwlD 42 230 1.1E-86 T 14-10-2018 IPR014234 N-acetylmuramoyl-L-alanine amidase CwlD MetaCyc: PWY-7883 DB29_01860 47362ba061a95d1de247e0e16523a89b 243 Gene3D G3DSA:3.40.630.40 34 240 6.7E-58 T 14-10-2018 DB29_02488 2fd56007b2aa4b8a8750870a3a860012 209 SUPERFAMILY SSF52317 4 177 5.31E-30 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like DB29_02488 2fd56007b2aa4b8a8750870a3a860012 209 Pfam PF01965 DJ-1/PfpI family 3 175 1.4E-33 T 14-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 DB29_02488 2fd56007b2aa4b8a8750870a3a860012 209 Gene3D G3DSA:3.40.50.880 1 209 1.1E-52 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like DB29_02241 b4fb30499f2b4cce64538ac336391e16 208 SUPERFAMILY SSF54909 2 91 4.74E-13 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel DB29_02241 b4fb30499f2b4cce64538ac336391e16 208 Pfam PF16291 Domain of unknown function (DUF4937 3 90 3.5E-34 T 14-10-2018 IPR032555 Domain of unknown function DUF4937 DB29_02241 b4fb30499f2b4cce64538ac336391e16 208 Gene3D G3DSA:3.30.70.100 37 202 1.8E-8 T 14-10-2018 DB29_02241 b4fb30499f2b4cce64538ac336391e16 208 SUPERFAMILY SSF54909 109 175 1.57E-5 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel DB29_00045 79cb8a6b6e2cf7a7fa36da86b19b0a47 196 SUPERFAMILY SSF102405 7 184 1.36E-62 T 14-10-2018 DB29_00045 79cb8a6b6e2cf7a7fa36da86b19b0a47 196 Pfam PF03641 Possible lysine decarboxylase 51 180 3.4E-43 T 14-10-2018 IPR031100 LOG family DB29_00045 79cb8a6b6e2cf7a7fa36da86b19b0a47 196 TIGRFAM TIGR00730 TIGR00730: TIGR00730 family protein 8 184 1.9E-55 T 14-10-2018 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG DB29_00045 79cb8a6b6e2cf7a7fa36da86b19b0a47 196 Gene3D G3DSA:3.40.50.450 2 196 1.8E-77 T 14-10-2018 DB29_01811 98b24a7a3b0f2a05897644288d01e3cf 441 Gene3D G3DSA:1.20.1250.20 10 390 2.6E-38 T 14-10-2018 DB29_01811 98b24a7a3b0f2a05897644288d01e3cf 441 Pfam PF07690 Major Facilitator Superfamily 30 360 5.3E-28 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DB29_01811 98b24a7a3b0f2a05897644288d01e3cf 441 SUPERFAMILY SSF103473 1 421 3.27E-45 T 14-10-2018 IPR036259 MFS transporter superfamily DB29_03272 84d1e88ebc274e4b977dc811702213f7 445 PRINTS PR00045 Sigma-54 factor signature 154 171 8.8E-25 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 DB29_03272 84d1e88ebc274e4b977dc811702213f7 445 PRINTS PR00045 Sigma-54 factor signature 414 432 8.8E-25 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 DB29_03272 84d1e88ebc274e4b977dc811702213f7 445 PRINTS PR00045 Sigma-54 factor signature 340 352 8.8E-25 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 DB29_03272 84d1e88ebc274e4b977dc811702213f7 445 PRINTS PR00045 Sigma-54 factor signature 356 367 8.8E-25 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 DB29_03272 84d1e88ebc274e4b977dc811702213f7 445 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 5 49 2.6E-14 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 DB29_03272 84d1e88ebc274e4b977dc811702213f7 445 Gene3D G3DSA:1.10.10.1330 88 204 7.4E-18 T 14-10-2018 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily DB29_03272 84d1e88ebc274e4b977dc811702213f7 445 PIRSF PIRSF000774 1 441 2.5E-147 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 DB29_03272 84d1e88ebc274e4b977dc811702213f7 445 Pfam PF04552 Sigma-54, DNA binding domain 281 439 3.5E-52 T 14-10-2018 IPR007634 RNA polymerase sigma factor 54, DNA-binding DB29_03272 84d1e88ebc274e4b977dc811702213f7 445 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 328 347 - T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 DB29_03272 84d1e88ebc274e4b977dc811702213f7 445 Gene3D G3DSA:1.10.10.60 379 438 5.1E-20 T 14-10-2018 DB29_03272 84d1e88ebc274e4b977dc811702213f7 445 Pfam PF04963 Sigma-54 factor, core binding domain 81 269 6.4E-47 T 14-10-2018 IPR007046 RNA polymerase sigma factor 54, core-binding domain GO:0003677|GO:0006352 DB29_03272 84d1e88ebc274e4b977dc811702213f7 445 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 9 438 1.5E-116 T 14-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 DB29_01754 a6e4cd064d73c33f7a71593c8939158e 450 Pfam PF00367 phosphotransferase system, EIIB 10 42 5.1E-15 T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 DB29_01754 a6e4cd064d73c33f7a71593c8939158e 450 SUPERFAMILY SSF55604 7 80 1.57E-19 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 DB29_01754 a6e4cd064d73c33f7a71593c8939158e 450 Gene3D G3DSA:3.30.1360.60 1 78 2.1E-22 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 DB29_01754 a6e4cd064d73c33f7a71593c8939158e 450 Pfam PF02378 Phosphotransferase system, EIIC 115 384 9.0E-33 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 DB29_01754 a6e4cd064d73c33f7a71593c8939158e 450 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 20 37 - T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 DB29_03504 20d21c44a9c1290306e50da04937d9c4 227 Pfam PF11167 Protein of unknown function (DUF2953) 131 182 9.8E-14 T 14-10-2018 IPR021338 Protein of unknown function DUF2953 DB29_00669 6fb55e9e06ad59982ba9c88119a8629c 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 2.2E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_00669 6fb55e9e06ad59982ba9c88119a8629c 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 2.2E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_00669 6fb55e9e06ad59982ba9c88119a8629c 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 2.2E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_00669 6fb55e9e06ad59982ba9c88119a8629c 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 209 229 2.2E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_00669 6fb55e9e06ad59982ba9c88119a8629c 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 2.2E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_00669 6fb55e9e06ad59982ba9c88119a8629c 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 2.2E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_00669 6fb55e9e06ad59982ba9c88119a8629c 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 2.3E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_00669 6fb55e9e06ad59982ba9c88119a8629c 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 2.3E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_00669 6fb55e9e06ad59982ba9c88119a8629c 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 2.3E-7 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_00669 6fb55e9e06ad59982ba9c88119a8629c 249 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 10 246 1.2E-70 T 14-10-2018 DB29_00669 6fb55e9e06ad59982ba9c88119a8629c 249 Gene3D G3DSA:3.40.50.720 1 248 7.7E-82 T 14-10-2018 DB29_00669 6fb55e9e06ad59982ba9c88119a8629c 249 SUPERFAMILY SSF51735 2 247 1.88E-82 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_03082 60912dd977293a87314e8d03059d32f9 340 Gene3D G3DSA:3.40.1190.20 31 335 6.7E-86 T 14-10-2018 IPR029056 Ribokinase-like DB29_03082 60912dd977293a87314e8d03059d32f9 340 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 32 332 1.9E-96 T 14-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 DB29_03082 60912dd977293a87314e8d03059d32f9 340 TIGRFAM TIGR03828 pfkB: 1-phosphofructokinase 32 332 1.7E-97 T 14-10-2018 IPR022463 Fructose 1-phosphate kinase GO:0008662 KEGG: 00051+2.7.1.56 DB29_03082 60912dd977293a87314e8d03059d32f9 340 PIRSF PIRSF000535 29 334 2.5E-72 T 14-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 DB29_03082 60912dd977293a87314e8d03059d32f9 340 Pfam PF00294 pfkB family carbohydrate kinase 39 317 1.9E-46 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB DB29_03082 60912dd977293a87314e8d03059d32f9 340 SUPERFAMILY SSF53613 31 316 2.81E-58 T 14-10-2018 IPR029056 Ribokinase-like DB29_02322 1f02092a526cf284823e1f086c208088 192 PIRSF PIRSF035805 1 191 1.0E-57 T 14-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 DB29_02322 1f02092a526cf284823e1f086c208088 192 SUPERFAMILY SSF57716 140 189 4.66E-19 T 14-10-2018 DB29_02322 1f02092a526cf284823e1f086c208088 192 Gene3D G3DSA:3.30.60.20 141 186 8.4E-14 T 14-10-2018 DB29_02322 1f02092a526cf284823e1f086c208088 192 SUPERFAMILY SSF52540 1 139 4.69E-37 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_02322 1f02092a526cf284823e1f086c208088 192 Pfam PF00265 Thymidine kinase 3 185 1.4E-47 T 14-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 DB29_02322 1f02092a526cf284823e1f086c208088 192 Gene3D G3DSA:3.40.50.300 1 139 5.5E-27 T 14-10-2018 DB29_02322 1f02092a526cf284823e1f086c208088 192 Hamap MF_00124 Thymidine kinase [tdk]. 1 188 33.367 T 14-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 DB29_02322 1f02092a526cf284823e1f086c208088 192 ProSitePatterns PS00603 Thymidine kinase cellular-type signature. 172 185 - T 14-10-2018 IPR020633 Thymidine kinase, conserved site GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 DB29_02963 23329ec0863e4906803d7af2c098c790 429 Pfam PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin 15 369 1.4E-27 T 14-10-2018 IPR001248 Purine-cytosine permease GO:0016020|GO:0022857|GO:0055085 DB29_02963 23329ec0863e4906803d7af2c098c790 429 Gene3D G3DSA:1.10.4160.10 2 428 5.8E-48 T 14-10-2018 IPR038271 Purine-cytosine permease superfamily DB29_00362 d3b83ca5074d690f0bc264c5f70421f1 276 Gene3D G3DSA:3.40.50.720 1 160 2.3E-31 T 14-10-2018 DB29_00362 d3b83ca5074d690f0bc264c5f70421f1 276 SUPERFAMILY SSF48179 158 263 1.48E-18 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 DB29_00362 d3b83ca5074d690f0bc264c5f70421f1 276 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 163 262 7.2E-16 T 14-10-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 DB29_00362 d3b83ca5074d690f0bc264c5f70421f1 276 PIRSF PIRSF000193 1 266 2.3E-67 T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 DB29_00362 d3b83ca5074d690f0bc264c5f70421f1 276 SUPERFAMILY SSF51735 1 153 8.49E-24 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_00362 d3b83ca5074d690f0bc264c5f70421f1 276 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 220 242 - T 14-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 DB29_00362 d3b83ca5074d690f0bc264c5f70421f1 276 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 3 97 2.9E-20 T 14-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal DB29_00362 d3b83ca5074d690f0bc264c5f70421f1 276 Gene3D G3DSA:1.10.3730.10 161 268 4.8E-15 T 14-10-2018 DB29_01234 58fee16bf7bf84c55cb398a6b90f7529 241 SUPERFAMILY SSF52540 1 235 5.2E-81 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_01234 58fee16bf7bf84c55cb398a6b90f7529 241 PIRSF PIRSF039085 1 241 1.1E-113 T 14-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 DB29_01234 58fee16bf7bf84c55cb398a6b90f7529 241 Pfam PF00005 ABC transporter 17 165 8.8E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB29_01234 58fee16bf7bf84c55cb398a6b90f7529 241 SMART SM00382 26 213 1.5E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_01234 58fee16bf7bf84c55cb398a6b90f7529 241 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB29_01234 58fee16bf7bf84c55cb398a6b90f7529 241 Gene3D G3DSA:3.40.50.300 1 240 2.3E-77 T 14-10-2018 DB29_00415 984106380f48c6a7d14b550ec0dad012 601 TIGRFAM TIGR02779 NHEJ_ligase_lig: DNA ligase D, ligase domain 3 303 1.6E-75 T 14-10-2018 IPR014146 DNA ligase D, ligase domain DB29_00415 984106380f48c6a7d14b550ec0dad012 601 SUPERFAMILY SSF56091 11 201 1.87E-32 T 14-10-2018 DB29_00415 984106380f48c6a7d14b550ec0dad012 601 TIGRFAM TIGR02778 ligD_pol: DNA ligase D, polymerase domain 317 554 4.6E-88 T 14-10-2018 IPR014145 DNA ligase D, polymerase domain DB29_00415 984106380f48c6a7d14b550ec0dad012 601 Gene3D G3DSA:3.90.920.30 327 596 9.3E-71 T 14-10-2018 DB29_00415 984106380f48c6a7d14b550ec0dad012 601 Pfam PF01068 ATP dependent DNA ligase domain 14 201 2.3E-26 T 14-10-2018 IPR012310 DNA ligase, ATP-dependent, central GO:0003910|GO:0005524|GO:0006281|GO:0006310 DB29_00415 984106380f48c6a7d14b550ec0dad012 601 Gene3D G3DSA:3.30.470.30 1 200 1.4E-32 T 14-10-2018 DB29_00415 984106380f48c6a7d14b550ec0dad012 601 TIGRFAM TIGR02776 NHEJ_ligase_prk: DNA ligase D 12 583 8.1E-185 T 14-10-2018 IPR014143 DNA ligase D DB29_00415 984106380f48c6a7d14b550ec0dad012 601 ProSitePatterns PS00333 ATP-dependent DNA ligase signature 2. 177 201 - T 14-10-2018 IPR016059 DNA ligase, ATP-dependent, conserved site GO:0003909|GO:0051103 DB29_00196 c67a47eb0a89c857557f87643124defe 195 Pfam PF14097 Stage V sporulation protein AE1 4 183 5.7E-77 T 14-10-2018 IPR025914 Stage V sporulation protein AE DB29_03217 8da0541fcddc21995b985c214e6e8b6c 353 Gene3D G3DSA:1.20.1330.10 39 210 4.6E-38 T 14-10-2018 DB29_03217 8da0541fcddc21995b985c214e6e8b6c 353 Pfam PF00700 Bacterial flagellin C-terminal helical region 269 352 1.0E-6 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 DB29_03217 8da0541fcddc21995b985c214e6e8b6c 353 Gene3D G3DSA:1.20.1330.10 213 326 1.9E-9 T 14-10-2018 DB29_03217 8da0541fcddc21995b985c214e6e8b6c 353 SUPERFAMILY SSF64518 1 353 5.62E-59 T 14-10-2018 DB29_03217 8da0541fcddc21995b985c214e6e8b6c 353 Pfam PF00669 Bacterial flagellin N-terminal helical region 8 140 5.0E-16 T 14-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 DB29_03217 8da0541fcddc21995b985c214e6e8b6c 353 TIGRFAM TIGR02550 flagell_flgL: flagellar hook-associated protein 3 2 352 3.1E-76 T 14-10-2018 IPR013384 Flagellar hook-associated protein 3 GO:0009424|GO:0071973 DB29_04151 7b5d0871c6b917188ce15dda924d91e5 647 TIGRFAM TIGR02882 QoxB: cytochrome aa3 quinol oxidase, subunit I 3 643 0.0 T 14-10-2018 IPR014233 Quinol oxidase subunit I GO:0005507|GO:0016021|GO:0016682|GO:0020037|GO:0055114 DB29_04151 7b5d0871c6b917188ce15dda924d91e5 647 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 53 499 3.9E-144 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DB29_04151 7b5d0871c6b917188ce15dda924d91e5 647 SUPERFAMILY SSF81442 42 553 4.06E-181 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DB29_04151 7b5d0871c6b917188ce15dda924d91e5 647 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 274 328 - T 14-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DB29_04151 7b5d0871c6b917188ce15dda924d91e5 647 Gene3D G3DSA:1.20.210.10 27 560 4.0E-204 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DB29_04151 7b5d0871c6b917188ce15dda924d91e5 647 PRINTS PR01165 Cytochrome c oxidase subunit I signature 118 142 1.3E-103 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DB29_04151 7b5d0871c6b917188ce15dda924d91e5 647 PRINTS PR01165 Cytochrome c oxidase subunit I signature 318 333 1.3E-103 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DB29_04151 7b5d0871c6b917188ce15dda924d91e5 647 PRINTS PR01165 Cytochrome c oxidase subunit I signature 377 395 1.3E-103 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DB29_04151 7b5d0871c6b917188ce15dda924d91e5 647 PRINTS PR01165 Cytochrome c oxidase subunit I signature 221 240 1.3E-103 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DB29_04151 7b5d0871c6b917188ce15dda924d91e5 647 PRINTS PR01165 Cytochrome c oxidase subunit I signature 405 424 1.3E-103 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DB29_04151 7b5d0871c6b917188ce15dda924d91e5 647 PRINTS PR01165 Cytochrome c oxidase subunit I signature 91 114 1.3E-103 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DB29_04151 7b5d0871c6b917188ce15dda924d91e5 647 PRINTS PR01165 Cytochrome c oxidase subunit I signature 342 363 1.3E-103 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DB29_04151 7b5d0871c6b917188ce15dda924d91e5 647 PRINTS PR01165 Cytochrome c oxidase subunit I signature 272 293 1.3E-103 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DB29_04151 7b5d0871c6b917188ce15dda924d91e5 647 PRINTS PR01165 Cytochrome c oxidase subunit I signature 44 69 1.3E-103 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DB29_04151 7b5d0871c6b917188ce15dda924d91e5 647 PRINTS PR01165 Cytochrome c oxidase subunit I signature 192 210 1.3E-103 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DB29_04151 7b5d0871c6b917188ce15dda924d91e5 647 PRINTS PR01165 Cytochrome c oxidase subunit I signature 455 476 1.3E-103 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DB29_04151 7b5d0871c6b917188ce15dda924d91e5 647 PRINTS PR01165 Cytochrome c oxidase subunit I signature 160 172 1.3E-103 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DB29_00721 6fed189b4ea03fe5585c3811655d6976 536 Pfam PF01019 Gamma-glutamyltranspeptidase 37 531 2.8E-162 T 14-10-2018 DB29_00721 6fed189b4ea03fe5585c3811655d6976 536 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 44 69 2.1E-40 T 14-10-2018 DB29_00721 6fed189b4ea03fe5585c3811655d6976 536 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 131 150 2.1E-40 T 14-10-2018 DB29_00721 6fed189b4ea03fe5585c3811655d6976 536 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 264 283 2.1E-40 T 14-10-2018 DB29_00721 6fed189b4ea03fe5585c3811655d6976 536 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 113 131 2.1E-40 T 14-10-2018 DB29_00721 6fed189b4ea03fe5585c3811655d6976 536 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 379 397 2.1E-40 T 14-10-2018 DB29_00721 6fed189b4ea03fe5585c3811655d6976 536 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 410 425 2.1E-40 T 14-10-2018 DB29_00721 6fed189b4ea03fe5585c3811655d6976 536 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 355 373 2.1E-40 T 14-10-2018 DB29_00721 6fed189b4ea03fe5585c3811655d6976 536 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 434 451 2.1E-40 T 14-10-2018 DB29_00721 6fed189b4ea03fe5585c3811655d6976 536 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 235 251 2.1E-40 T 14-10-2018 DB29_00721 6fed189b4ea03fe5585c3811655d6976 536 Gene3D G3DSA:1.10.246.130 251 355 2.5E-24 T 14-10-2018 DB29_00721 6fed189b4ea03fe5585c3811655d6976 536 SUPERFAMILY SSF56235 5 534 1.47E-184 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DB29_00721 6fed189b4ea03fe5585c3811655d6976 536 Gene3D G3DSA:3.60.20.40 356 536 2.2E-67 T 14-10-2018 DB29_03305 0e9349506ab3558c117962d047c05ac7 222 Pfam PF13712 Glycosyltransferase like family 7 202 7.1E-74 T 14-10-2018 DB29_03305 0e9349506ab3558c117962d047c05ac7 222 Gene3D G3DSA:3.90.550.10 6 220 1.2E-37 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DB29_01765 7d54a4c196c1bac1d3a4b193177d600a 337 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 34 313 3.2E-84 T 14-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 DB29_01765 7d54a4c196c1bac1d3a4b193177d600a 337 Gene3D G3DSA:3.40.190.170 32 335 8.4E-97 T 14-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily DB29_01765 7d54a4c196c1bac1d3a4b193177d600a 337 PIRSF PIRSF006470 1 329 3.1E-86 T 14-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 DB29_01765 7d54a4c196c1bac1d3a4b193177d600a 337 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 34 289 7.3E-73 T 14-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 DB29_02727 6c65ee21b75732bf8f014fa433cbab1d 318 Gene3D G3DSA:1.20.58.840 147 311 1.3E-42 T 14-10-2018 DB29_02727 6c65ee21b75732bf8f014fa433cbab1d 318 Gene3D G3DSA:1.10.510.10 115 265 1.3E-42 T 14-10-2018 DB29_02727 6c65ee21b75732bf8f014fa433cbab1d 318 Pfam PF01636 Phosphotransferase enzyme family 19 248 1.0E-20 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase DB29_02727 6c65ee21b75732bf8f014fa433cbab1d 318 Gene3D G3DSA:3.30.200.20 1 105 1.6E-6 T 14-10-2018 DB29_02727 6c65ee21b75732bf8f014fa433cbab1d 318 SUPERFAMILY SSF56112 2 278 2.77E-32 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily DB29_00032 278c7ef8c24beb8efed56c34b6b01b0d 412 Pfam PF13193 AMP-binding enzyme C-terminal domain 327 401 2.5E-12 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain DB29_00032 278c7ef8c24beb8efed56c34b6b01b0d 412 Pfam PF00501 AMP-binding enzyme 105 272 1.2E-14 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 DB29_00032 278c7ef8c24beb8efed56c34b6b01b0d 412 SUPERFAMILY SSF56801 33 407 1.57E-64 T 14-10-2018 DB29_00032 278c7ef8c24beb8efed56c34b6b01b0d 412 ProSitePatterns PS00455 Putative AMP-binding domain signature. 106 117 - T 14-10-2018 IPR020845 AMP-binding, conserved site DB29_00032 278c7ef8c24beb8efed56c34b6b01b0d 412 Gene3D G3DSA:3.40.50.12780 2 314 2.8E-32 T 14-10-2018 DB29_00032 278c7ef8c24beb8efed56c34b6b01b0d 412 Gene3D G3DSA:3.30.300.30 315 411 2.1E-24 T 14-10-2018 DB29_00807 4e12fb2600c189d68a42e896d0f86595 444 SUPERFAMILY SSF103473 165 441 1.4E-6 T 14-10-2018 IPR036259 MFS transporter superfamily DB29_00807 4e12fb2600c189d68a42e896d0f86595 444 PIRSF PIRSF006060 2 440 3.4E-54 T 14-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 DB29_00807 4e12fb2600c189d68a42e896d0f86595 444 Pfam PF00324 Amino acid permease 20 385 1.8E-50 T 14-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 DB29_00807 4e12fb2600c189d68a42e896d0f86595 444 Gene3D G3DSA:1.20.1740.10 7 444 1.2E-52 T 14-10-2018 DB29_02841 700820b0adf914cee9a9351dff966759 207 Pfam PF16859 Bacterial transcriptional repressor C-terminal 93 197 2.3E-11 T 14-10-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal DB29_02841 700820b0adf914cee9a9351dff966759 207 SUPERFAMILY SSF48498 93 203 8.67E-9 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily DB29_02841 700820b0adf914cee9a9351dff966759 207 ProSitePatterns PS01081 TetR-type HTH domain signature. 39 70 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site DB29_02841 700820b0adf914cee9a9351dff966759 207 Gene3D G3DSA:1.10.10.60 12 65 1.1E-22 T 14-10-2018 DB29_02841 700820b0adf914cee9a9351dff966759 207 Gene3D G3DSA:1.10.357.10 66 205 5.5E-12 T 14-10-2018 DB29_02841 700820b0adf914cee9a9351dff966759 207 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 48 71 8.6E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DB29_02841 700820b0adf914cee9a9351dff966759 207 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 27 40 8.6E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DB29_02841 700820b0adf914cee9a9351dff966759 207 Pfam PF00440 Bacterial regulatory proteins, tetR family 27 71 2.5E-15 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DB29_02841 700820b0adf914cee9a9351dff966759 207 SUPERFAMILY SSF46689 25 76 1.05E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DB29_02123 33beeb40563a1a4b9a43635e75c18bf4 244 Pfam PF04397 LytTr DNA-binding domain 146 242 7.6E-29 T 14-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 DB29_02123 33beeb40563a1a4b9a43635e75c18bf4 244 SUPERFAMILY SSF52172 4 138 3.56E-29 T 14-10-2018 IPR011006 CheY-like superfamily DB29_02123 33beeb40563a1a4b9a43635e75c18bf4 244 SMART SM00850 145 243 1.4E-33 T 14-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 DB29_02123 33beeb40563a1a4b9a43635e75c18bf4 244 Gene3D G3DSA:3.40.50.2300 1 134 5.5E-29 T 14-10-2018 DB29_02123 33beeb40563a1a4b9a43635e75c18bf4 244 Pfam PF00072 Response regulator receiver domain 9 117 8.1E-19 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DB29_02123 33beeb40563a1a4b9a43635e75c18bf4 244 SMART SM00448 6 117 1.9E-18 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DB29_02123 33beeb40563a1a4b9a43635e75c18bf4 244 Gene3D G3DSA:2.40.50.40 137 204 1.7E-12 T 14-10-2018 DB29_01373 2692c38136ebc24f6c4fb83c7495234e 213 SUPERFAMILY SSF102198 7 211 1.12E-57 T 14-10-2018 IPR037175 Kynurenine formamidase superfamily GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 DB29_01373 2692c38136ebc24f6c4fb83c7495234e 213 Hamap MF_01969 Kynurenine formamidase [kynB]. 9 213 41.397 T 14-10-2018 IPR017484 Kynurenine formamidase, bacteria GO:0004328|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 DB29_01373 2692c38136ebc24f6c4fb83c7495234e 213 Pfam PF04199 Putative cyclase 11 156 6.0E-20 T 14-10-2018 IPR007325 Kynurenine formamidase/cyclase-like GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 DB29_01373 2692c38136ebc24f6c4fb83c7495234e 213 Gene3D G3DSA:3.50.30.50 4 213 5.7E-72 T 14-10-2018 IPR037175 Kynurenine formamidase superfamily GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 DB29_01373 2692c38136ebc24f6c4fb83c7495234e 213 TIGRFAM TIGR03035 trp_arylform: arylformamidase 9 213 2.7E-98 T 14-10-2018 IPR017484 Kynurenine formamidase, bacteria GO:0004328|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 DB29_01281 d290dfd499fdb29c87444387767305b7 293 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 115 286 1.8E-13 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DB29_01281 d290dfd499fdb29c87444387767305b7 293 SUPERFAMILY SSF161098 9 292 5.32E-54 T 14-10-2018 IPR035906 MetI-like superfamily DB29_01281 d290dfd499fdb29c87444387767305b7 293 Gene3D G3DSA:1.10.3720.10 1 284 8.6E-70 T 14-10-2018 IPR035906 MetI-like superfamily DB29_02417 939c2b23eaf87b73f029bce70d01f8db 213 Gene3D G3DSA:3.40.50.720 1 211 7.3E-43 T 14-10-2018 DB29_02417 939c2b23eaf87b73f029bce70d01f8db 213 SUPERFAMILY SSF51735 1 211 3.76E-24 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_02417 939c2b23eaf87b73f029bce70d01f8db 213 Pfam PF13460 NAD(P)H-binding 7 194 1.4E-18 T 14-10-2018 IPR016040 NAD(P)-binding domain DB29_03214 a22256b6fe7d7509fb4f205ba696cdc6 88 TIGRFAM TIGR03824 FlgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM 1 83 2.1E-14 T 14-10-2018 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 DB29_03214 a22256b6fe7d7509fb4f205ba696cdc6 88 SUPERFAMILY SSF101498 1 83 1.05E-18 T 14-10-2018 IPR035890 Anti-sigma-28 factor FlgM superfamily DB29_03214 a22256b6fe7d7509fb4f205ba696cdc6 88 Pfam PF04316 Anti-sigma-28 factor, FlgM 33 80 4.0E-13 T 14-10-2018 IPR031316 Anti-sigma-28 factor FlgM, C-terminal DB29_03815 cd93a18e12782cf7c21c7f340561667d 657 Pfam PF08448 PAS fold 102 198 5.4E-6 T 14-10-2018 IPR013656 PAS fold-4 DB29_03815 cd93a18e12782cf7c21c7f340561667d 657 Pfam PF00158 Sigma-54 interaction domain 345 512 1.9E-67 T 14-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 DB29_03815 cd93a18e12782cf7c21c7f340561667d 657 SUPERFAMILY SSF55785 199 313 1.22E-15 T 14-10-2018 IPR035965 PAS domain superfamily DB29_03815 cd93a18e12782cf7c21c7f340561667d 657 Pfam PF02954 Bacterial regulatory protein, Fis family 614 654 3.0E-13 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DB29_03815 cd93a18e12782cf7c21c7f340561667d 657 Gene3D G3DSA:1.10.10.60 586 657 2.6E-15 T 14-10-2018 DB29_03815 cd93a18e12782cf7c21c7f340561667d 657 SMART SM00382 365 509 3.6E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_03815 cd93a18e12782cf7c21c7f340561667d 657 Gene3D G3DSA:3.30.450.20 90 196 2.8E-16 T 14-10-2018 DB29_03815 cd93a18e12782cf7c21c7f340561667d 657 Gene3D G3DSA:3.30.450.20 200 316 8.4E-17 T 14-10-2018 DB29_03815 cd93a18e12782cf7c21c7f340561667d 657 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 637 657 4.6E-8 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DB29_03815 cd93a18e12782cf7c21c7f340561667d 657 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 620 637 4.6E-8 T 14-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 DB29_03815 cd93a18e12782cf7c21c7f340561667d 657 Gene3D G3DSA:1.10.8.60 517 581 6.6E-18 T 14-10-2018 DB29_03815 cd93a18e12782cf7c21c7f340561667d 657 SUPERFAMILY SSF46689 559 656 3.37E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DB29_03815 cd93a18e12782cf7c21c7f340561667d 657 Gene3D G3DSA:3.40.50.300 330 516 6.3E-66 T 14-10-2018 DB29_03815 cd93a18e12782cf7c21c7f340561667d 657 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 559 568 - T 14-10-2018 IPR025944 Sigma-54 interaction domain, conserved site DB29_03815 cd93a18e12782cf7c21c7f340561667d 657 SMART SM00091 95 161 4.3E-5 T 14-10-2018 IPR000014 PAS domain DB29_03815 cd93a18e12782cf7c21c7f340561667d 657 SMART SM00091 213 278 1.9E-6 T 14-10-2018 IPR000014 PAS domain DB29_03815 cd93a18e12782cf7c21c7f340561667d 657 SUPERFAMILY SSF52540 344 578 1.21E-67 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_03815 cd93a18e12782cf7c21c7f340561667d 657 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 212 323 9.1E-15 T 14-10-2018 IPR000014 PAS domain DB29_03815 cd93a18e12782cf7c21c7f340561667d 657 Pfam PF00989 PAS fold 214 316 1.8E-13 T 14-10-2018 IPR013767 PAS fold GO:0006355 DB29_03815 cd93a18e12782cf7c21c7f340561667d 657 SUPERFAMILY SSF55785 106 204 2.79E-8 T 14-10-2018 IPR035965 PAS domain superfamily DB29_03815 cd93a18e12782cf7c21c7f340561667d 657 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 369 382 - T 14-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 DB29_03072 1a37235b88e3ead5429794676f19a6d6 351 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB29_03072 1a37235b88e3ead5429794676f19a6d6 351 Pfam PF08402 TOBE domain 276 348 1.1E-9 T 14-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 DB29_03072 1a37235b88e3ead5429794676f19a6d6 351 SUPERFAMILY SSF52540 3 241 1.1E-82 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_03072 1a37235b88e3ead5429794676f19a6d6 351 Gene3D G3DSA:2.40.50.940 222 348 1.6E-8 T 14-10-2018 DB29_03072 1a37235b88e3ead5429794676f19a6d6 351 Gene3D G3DSA:3.40.50.300 3 221 1.5E-62 T 14-10-2018 DB29_03072 1a37235b88e3ead5429794676f19a6d6 351 Gene3D G3DSA:2.40.50.140 282 342 1.6E-8 T 14-10-2018 DB29_03072 1a37235b88e3ead5429794676f19a6d6 351 SUPERFAMILY SSF50331 238 348 4.08E-12 T 14-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal DB29_03072 1a37235b88e3ead5429794676f19a6d6 351 SMART SM00382 28 219 1.2E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_03072 1a37235b88e3ead5429794676f19a6d6 351 Pfam PF00005 ABC transporter 19 161 4.9E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB29_04020 00933c98f98e64b2602db803a4029cf2 396 SUPERFAMILY SSF103039 52 240 3.79E-47 T 14-10-2018 IPR028976 CheC-like superfamily DB29_04020 00933c98f98e64b2602db803a4029cf2 396 PRINTS PR00956 Flagellar motor switch protein FliN signature 362 377 1.1E-28 T 14-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 DB29_04020 00933c98f98e64b2602db803a4029cf2 396 PRINTS PR00956 Flagellar motor switch protein FliN signature 349 362 1.1E-28 T 14-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 DB29_04020 00933c98f98e64b2602db803a4029cf2 396 PRINTS PR00956 Flagellar motor switch protein FliN signature 316 332 1.1E-28 T 14-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 DB29_04020 00933c98f98e64b2602db803a4029cf2 396 PRINTS PR00956 Flagellar motor switch protein FliN signature 333 349 1.1E-28 T 14-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 DB29_04020 00933c98f98e64b2602db803a4029cf2 396 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 316 386 2.7E-25 T 14-10-2018 IPR001543 Surface presentation of antigen (SpoA) DB29_04020 00933c98f98e64b2602db803a4029cf2 396 Pfam PF04509 CheC-like family 57 93 9.9E-14 T 14-10-2018 IPR007597 CheC-like protein GO:0016787 DB29_04020 00933c98f98e64b2602db803a4029cf2 396 Pfam PF04509 CheC-like family 154 190 2.9E-16 T 14-10-2018 IPR007597 CheC-like protein GO:0016787 DB29_04020 00933c98f98e64b2602db803a4029cf2 396 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 313 388 4.1E-31 T 14-10-2018 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 DB29_04020 00933c98f98e64b2602db803a4029cf2 396 Gene3D G3DSA:2.30.330.10 302 396 3.0E-36 T 14-10-2018 IPR036429 SpoA-like superfamily DB29_04020 00933c98f98e64b2602db803a4029cf2 396 Gene3D G3DSA:3.40.1550.10 52 244 1.4E-54 T 14-10-2018 IPR028976 CheC-like superfamily DB29_04020 00933c98f98e64b2602db803a4029cf2 396 SUPERFAMILY SSF101801 313 394 7.46E-25 T 14-10-2018 IPR036429 SpoA-like superfamily DB29_03044 8da33409dbcdfd2a9ff75250e64cc7f4 337 Pfam PF07663 Sorbitol phosphotransferase enzyme II C-terminus 245 337 1.6E-45 T 14-10-2018 IPR011638 Sorbitol phosphotransferase enzyme II, C-terminal GO:0008982|GO:0009401|GO:0016021 KEGG: 00051+2.7.1.198 DB29_03044 8da33409dbcdfd2a9ff75250e64cc7f4 337 Pfam PF03612 Sorbitol phosphotransferase enzyme II N-terminus 6 190 4.5E-73 T 14-10-2018 IPR011618 Sorbitol phosphotransferase enzyme II, N-terminal GO:0008982|GO:0009401|GO:0016021 KEGG: 00051+2.7.1.198 DB29_02157 35b67727ca53564a1e435783414777b4 608 SUPERFAMILY SSF143968 522 603 4.05E-6 T 14-10-2018 DB29_02157 35b67727ca53564a1e435783414777b4 608 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 7 455 1.3E-79 T 14-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 DB29_02157 35b67727ca53564a1e435783414777b4 608 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 11 433 3.2E-119 T 14-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 DB29_02157 35b67727ca53564a1e435783414777b4 608 SUPERFAMILY SSF143968 316 456 6.02E-25 T 14-10-2018 DB29_02157 35b67727ca53564a1e435783414777b4 608 SUPERFAMILY SSF50475 2 315 1.37E-91 T 14-10-2018 DB29_02157 35b67727ca53564a1e435783414777b4 608 Gene3D G3DSA:3.40.1670.10 332 456 1.1E-5 T 14-10-2018 DB29_00555 d641ed213da45b6eb464cb65a4505d9b 247 SMART SM00382 40 215 2.8E-6 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_00555 d641ed213da45b6eb464cb65a4505d9b 247 Gene3D G3DSA:3.40.50.300 32 110 7.1E-7 T 14-10-2018 DB29_00555 d641ed213da45b6eb464cb65a4505d9b 247 Gene3D G3DSA:3.40.50.300 127 220 4.6E-9 T 14-10-2018 DB29_00555 d641ed213da45b6eb464cb65a4505d9b 247 SUPERFAMILY SSF52540 36 219 5.04E-22 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_00555 d641ed213da45b6eb464cb65a4505d9b 247 Pfam PF13476 AAA domain 32 64 9.6E-7 T 14-10-2018 IPR038729 Rad50/SbcC-type AAA domain DB29_00757 3eb9da23b77a572fa7e45219ffa12bc4 274 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 8 263 1.1E-91 T 14-10-2018 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 DB29_00757 3eb9da23b77a572fa7e45219ffa12bc4 274 SUPERFAMILY SSF161098 12 259 9.42E-55 T 14-10-2018 IPR035906 MetI-like superfamily DB29_00757 3eb9da23b77a572fa7e45219ffa12bc4 274 TIGRFAM TIGR02139 permease_CysT: sulfate ABC transporter, permease protein CysT 5 267 3.8E-119 T 14-10-2018 IPR011865 Sulphate ABC transporter, permease protein CysT GO:0008272|GO:0015116|GO:0016021 DB29_00757 3eb9da23b77a572fa7e45219ffa12bc4 274 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 73 269 2.0E-23 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DB29_00757 3eb9da23b77a572fa7e45219ffa12bc4 274 Gene3D G3DSA:1.10.3720.10 9 266 1.0E-64 T 14-10-2018 IPR035906 MetI-like superfamily DB29_04026 eefde7955cd8d9315d945f5fe1377d47 362 SUPERFAMILY SSF160544 251 358 1.57E-40 T 14-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal DB29_04026 eefde7955cd8d9315d945f5fe1377d47 362 Gene3D G3DSA:3.40.1690.10 225 362 4.3E-54 T 14-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal DB29_04026 eefde7955cd8d9315d945f5fe1377d47 362 Pfam PF01312 FlhB HrpN YscU SpaS Family 13 354 1.8E-126 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 DB29_04026 eefde7955cd8d9315d945f5fe1377d47 362 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 13 360 4.3E-121 T 14-10-2018 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 DB29_04026 eefde7955cd8d9315d945f5fe1377d47 362 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 235 252 5.2E-41 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 DB29_04026 eefde7955cd8d9315d945f5fe1377d47 362 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 309 330 5.2E-41 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 DB29_04026 eefde7955cd8d9315d945f5fe1377d47 362 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 16 38 5.2E-41 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 DB29_04026 eefde7955cd8d9315d945f5fe1377d47 362 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 215 233 5.2E-41 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 DB29_04026 eefde7955cd8d9315d945f5fe1377d47 362 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 279 294 5.2E-41 T 14-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 DB29_04080 a0b25b8a87e728174116b81bd9935db5 330 SUPERFAMILY SSF56300 3 243 3.93E-33 T 14-10-2018 DB29_04080 a0b25b8a87e728174116b81bd9935db5 330 Gene3D G3DSA:3.60.21.10 2 247 1.0E-27 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like DB29_04080 a0b25b8a87e728174116b81bd9935db5 330 Pfam PF00149 Calcineurin-like phosphoesterase 3 198 9.3E-14 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 DB29_03808 527d90030765d611677434ae4eb0aa9c 149 SUPERFAMILY SSF55252 80 149 3.14E-22 T 14-10-2018 IPR036251 Arginine repressor, C-terminal domain superfamily GO:0034618|GO:0051259 DB29_03808 527d90030765d611677434ae4eb0aa9c 149 Pfam PF02863 Arginine repressor, C-terminal domain 81 145 3.6E-27 T 14-10-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 DB29_03808 527d90030765d611677434ae4eb0aa9c 149 Hamap MF_00173 Arginine repressor [argR]. 1 149 70.75 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 DB29_03808 527d90030765d611677434ae4eb0aa9c 149 Gene3D G3DSA:3.30.1360.40 68 149 6.8E-33 T 14-10-2018 DB29_03808 527d90030765d611677434ae4eb0aa9c 149 Pfam PF01316 Arginine repressor, DNA binding domain 1 70 8.8E-30 T 14-10-2018 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 DB29_03808 527d90030765d611677434ae4eb0aa9c 149 TIGRFAM TIGR01529 argR_whole: arginine repressor 5 149 2.4E-54 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 DB29_03808 527d90030765d611677434ae4eb0aa9c 149 Gene3D G3DSA:1.10.10.10 4 67 2.0E-29 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_03808 527d90030765d611677434ae4eb0aa9c 149 ProDom PD007402 ARGININE REPRESSOR TRANSCRIPTION BIOSYNTHESIS DNA-BINDING REGULATION AMINO-ACID ARGR TRANSCRIPTIONAL FAMILY 87 149 3.0E-23 T 14-10-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 DB29_03808 527d90030765d611677434ae4eb0aa9c 149 PRINTS PR01467 Bacterial arginine repressor signature 21 34 3.6E-27 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 DB29_03808 527d90030765d611677434ae4eb0aa9c 149 PRINTS PR01467 Bacterial arginine repressor signature 118 133 3.6E-27 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 DB29_03808 527d90030765d611677434ae4eb0aa9c 149 PRINTS PR01467 Bacterial arginine repressor signature 88 101 3.6E-27 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 DB29_03808 527d90030765d611677434ae4eb0aa9c 149 PRINTS PR01467 Bacterial arginine repressor signature 37 52 3.6E-27 T 14-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 DB29_03808 527d90030765d611677434ae4eb0aa9c 149 SUPERFAMILY SSF46785 5 78 2.54E-24 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_00254 7c19515f5e59793c5b9f7f4681d6ace9 144 SUPERFAMILY SSF51316 4 143 3.77E-61 T 14-10-2018 IPR011057 Mss4-like superfamily DB29_00254 7c19515f5e59793c5b9f7f4681d6ace9 144 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 2 128 38.73 T 14-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 DB29_00254 7c19515f5e59793c5b9f7f4681d6ace9 144 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 4 136 1.6E-65 T 14-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 DB29_00254 7c19515f5e59793c5b9f7f4681d6ace9 144 Gene3D G3DSA:2.170.150.20 2 144 2.3E-61 T 14-10-2018 DB29_00254 7c19515f5e59793c5b9f7f4681d6ace9 144 Pfam PF01641 SelR domain 8 127 2.1E-50 T 14-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 DB29_02474 1a8024e52d348b705c7eb70023a9dfb3 448 Gene3D G3DSA:3.20.20.140 53 415 1.6E-144 T 14-10-2018 DB29_02474 1a8024e52d348b705c7eb70023a9dfb3 448 Hamap MF_01645 Allantoinase [allB]. 1 447 53.578 T 14-10-2018 IPR017593 Allantoinase GO:0000256|GO:0004038|GO:0008270|GO:0050897 KEGG: 00230+3.5.2.5|MetaCyc: PWY-5697|MetaCyc: PWY-5698 DB29_02474 1a8024e52d348b705c7eb70023a9dfb3 448 Pfam PF01979 Amidohydrolase family 50 428 1.1E-27 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 DB29_02474 1a8024e52d348b705c7eb70023a9dfb3 448 Gene3D G3DSA:2.30.40.10 4 430 1.6E-144 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DB29_02474 1a8024e52d348b705c7eb70023a9dfb3 448 SUPERFAMILY SSF51556 54 375 3.89E-97 T 14-10-2018 IPR032466 Metal-dependent hydrolase DB29_02474 1a8024e52d348b705c7eb70023a9dfb3 448 SUPERFAMILY SSF51338 1 445 5.33E-26 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DB29_02474 1a8024e52d348b705c7eb70023a9dfb3 448 TIGRFAM TIGR03178 allantoinase: allantoinase 3 446 3.1E-204 T 14-10-2018 IPR017593 Allantoinase GO:0000256|GO:0004038|GO:0008270|GO:0050897 KEGG: 00230+3.5.2.5|MetaCyc: PWY-5697|MetaCyc: PWY-5698 DB29_02082 3eae0ffb2b1fed28f91df4f26d83ac73 453 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 10 442 1.5E-187 T 14-10-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 DB29_02082 3eae0ffb2b1fed28f91df4f26d83ac73 453 Pfam PF00772 DnaB-like helicase N terminal domain 10 111 1.8E-35 T 14-10-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 DB29_02082 3eae0ffb2b1fed28f91df4f26d83ac73 453 Pfam PF03796 DnaB-like helicase C terminal domain 185 440 1.0E-118 T 14-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 DB29_02082 3eae0ffb2b1fed28f91df4f26d83ac73 453 SMART SM00382 202 391 0.0034 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_02082 3eae0ffb2b1fed28f91df4f26d83ac73 453 SUPERFAMILY SSF48024 8 119 2.22E-37 T 14-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 DB29_02082 3eae0ffb2b1fed28f91df4f26d83ac73 453 SUPERFAMILY SSF52540 183 433 5.69E-54 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_02082 3eae0ffb2b1fed28f91df4f26d83ac73 453 Gene3D G3DSA:3.40.50.300 167 453 2.6E-117 T 14-10-2018 DB29_02082 3eae0ffb2b1fed28f91df4f26d83ac73 453 Gene3D G3DSA:1.10.860.10 1 166 1.8E-63 T 14-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal DB29_01685 1489dae013851c51e0fdc26b202743a6 249 Gene3D G3DSA:1.10.10.60 139 245 2.8E-15 T 14-10-2018 DB29_01685 1489dae013851c51e0fdc26b202743a6 249 SMART SM00342 155 239 1.2E-9 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DB29_01685 1489dae013851c51e0fdc26b202743a6 249 Pfam PF12833 Helix-turn-helix domain 161 238 6.6E-13 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DB29_02069 d785e1083416a02cb555f87827b8d514 253 SUPERFAMILY SSF52540 3 251 8.2E-70 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_02069 d785e1083416a02cb555f87827b8d514 253 Gene3D G3DSA:3.40.50.300 1 252 1.2E-83 T 14-10-2018 DB29_02069 d785e1083416a02cb555f87827b8d514 253 PRINTS PR00091 Nitrogenase component II signature 31 46 8.7E-5 T 14-10-2018 DB29_02069 d785e1083416a02cb555f87827b8d514 253 PRINTS PR00091 Nitrogenase component II signature 9 22 8.7E-5 T 14-10-2018 DB29_02069 d785e1083416a02cb555f87827b8d514 253 Pfam PF13614 AAA domain 3 178 3.5E-73 T 14-10-2018 IPR025669 AAA domain DB29_00608 3f0b2bf1ab5bd6c4365393fc58e1332a 425 PRINTS PR00981 Seryl-tRNA synthetase signature 275 288 1.3E-24 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 DB29_00608 3f0b2bf1ab5bd6c4365393fc58e1332a 425 PRINTS PR00981 Seryl-tRNA synthetase signature 263 275 1.3E-24 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 DB29_00608 3f0b2bf1ab5bd6c4365393fc58e1332a 425 PRINTS PR00981 Seryl-tRNA synthetase signature 334 350 1.3E-24 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 DB29_00608 3f0b2bf1ab5bd6c4365393fc58e1332a 425 PRINTS PR00981 Seryl-tRNA synthetase signature 317 330 1.3E-24 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 DB29_00608 3f0b2bf1ab5bd6c4365393fc58e1332a 425 PRINTS PR00981 Seryl-tRNA synthetase signature 352 368 1.3E-24 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 DB29_00608 3f0b2bf1ab5bd6c4365393fc58e1332a 425 SUPERFAMILY SSF46589 1 114 2.3E-24 T 14-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 DB29_00608 3f0b2bf1ab5bd6c4365393fc58e1332a 425 Gene3D G3DSA:1.10.287.40 1 106 5.6E-22 T 14-10-2018 DB29_00608 3f0b2bf1ab5bd6c4365393fc58e1332a 425 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 223 399 7.1E-21 T 14-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 DB29_00608 3f0b2bf1ab5bd6c4365393fc58e1332a 425 Gene3D G3DSA:3.30.930.10 107 424 4.0E-110 T 14-10-2018 DB29_00608 3f0b2bf1ab5bd6c4365393fc58e1332a 425 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 109 1.3E-22 T 14-10-2018 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: R-HSA-2408557|Reactome: R-HSA-379716 DB29_00608 3f0b2bf1ab5bd6c4365393fc58e1332a 425 PIRSF PIRSF001529 1 425 5.5E-134 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 DB29_00608 3f0b2bf1ab5bd6c4365393fc58e1332a 425 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 417 1.5E-129 T 14-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 DB29_00608 3f0b2bf1ab5bd6c4365393fc58e1332a 425 SUPERFAMILY SSF55681 117 418 6.11E-81 T 14-10-2018 DB29_02148 5ce123c18438c2cff021064da6f90250 420 SUPERFAMILY SSF51556 49 369 1.02E-104 T 14-10-2018 IPR032466 Metal-dependent hydrolase DB29_02148 5ce123c18438c2cff021064da6f90250 420 Gene3D G3DSA:2.30.40.10 6 403 1.2E-176 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DB29_02148 5ce123c18438c2cff021064da6f90250 420 Gene3D G3DSA:3.20.20.140 50 357 1.2E-176 T 14-10-2018 DB29_02148 5ce123c18438c2cff021064da6f90250 420 Pfam PF07969 Amidohydrolase family 37 398 2.0E-47 T 14-10-2018 IPR013108 Amidohydrolase 3 DB29_02148 5ce123c18438c2cff021064da6f90250 420 SUPERFAMILY SSF51338 14 400 3.57E-11 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DB29_00782 c1a50b288f0cf07f6f8a1c304973daec 143 Gene3D G3DSA:3.30.70.920 51 140 1.7E-24 T 14-10-2018 DB29_00782 c1a50b288f0cf07f6f8a1c304973daec 143 SMART SM00344 3 109 1.1E-41 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 DB29_00782 c1a50b288f0cf07f6f8a1c304973daec 143 ProSitePatterns PS00519 AsnC-type HTH domain signature. 21 47 - T 14-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site DB29_00782 c1a50b288f0cf07f6f8a1c304973daec 143 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 3 19 2.0E-14 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 DB29_00782 c1a50b288f0cf07f6f8a1c304973daec 143 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 19 30 2.0E-14 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 DB29_00782 c1a50b288f0cf07f6f8a1c304973daec 143 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 30 49 2.0E-14 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 DB29_00782 c1a50b288f0cf07f6f8a1c304973daec 143 SUPERFAMILY SSF46785 2 62 7.49E-17 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_00782 c1a50b288f0cf07f6f8a1c304973daec 143 SUPERFAMILY SSF54909 64 137 1.47E-15 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel DB29_00782 c1a50b288f0cf07f6f8a1c304973daec 143 Pfam PF13404 AsnC-type helix-turn-helix domain 3 44 1.9E-16 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 DB29_00782 c1a50b288f0cf07f6f8a1c304973daec 143 Gene3D G3DSA:1.10.10.10 1 50 2.4E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_00782 c1a50b288f0cf07f6f8a1c304973daec 143 Pfam PF01037 Lrp/AsnC ligand binding domain 70 136 1.1E-13 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain DB29_02835 523788fda44b949a235df07e3e24ff3d 279 SUPERFAMILY SSF51658 1 258 5.63E-49 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily DB29_02835 523788fda44b949a235df07e3e24ff3d 279 Gene3D G3DSA:3.20.20.150 1 268 2.0E-62 T 14-10-2018 DB29_02835 523788fda44b949a235df07e3e24ff3d 279 Pfam PF01261 Xylose isomerase-like TIM barrel 20 212 8.0E-30 T 14-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain DB29_00644 a2929f3e870f3717597c3ead57c99f1d 148 Gene3D G3DSA:1.10.10.10 14 148 5.8E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_00644 a2929f3e870f3717597c3ead57c99f1d 148 SUPERFAMILY SSF46785 13 145 3.32E-25 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_00644 a2929f3e870f3717597c3ead57c99f1d 148 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 56 74 - T 14-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site DB29_00644 a2929f3e870f3717597c3ead57c99f1d 148 Pfam PF02082 Transcriptional regulator 16 90 1.7E-20 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type DB29_00730 d455082a4d090383b7e4b3b211e483a1 572 Pfam PF00664 ABC transporter transmembrane region 17 283 5.7E-45 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 DB29_00730 d455082a4d090383b7e4b3b211e483a1 572 SUPERFAMILY SSF52540 325 567 1.13E-82 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_00730 d455082a4d090383b7e4b3b211e483a1 572 SMART SM00382 359 543 3.6E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_00730 d455082a4d090383b7e4b3b211e483a1 572 ProSitePatterns PS00211 ABC transporters family signature. 471 485 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB29_00730 d455082a4d090383b7e4b3b211e483a1 572 Gene3D G3DSA:1.20.1560.10 1 313 1.7E-85 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DB29_00730 d455082a4d090383b7e4b3b211e483a1 572 SUPERFAMILY SSF90123 2 315 1.96E-73 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DB29_00730 d455082a4d090383b7e4b3b211e483a1 572 Pfam PF00005 ABC transporter 350 499 1.9E-37 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB29_00730 d455082a4d090383b7e4b3b211e483a1 572 Gene3D G3DSA:3.40.50.300 327 572 1.4E-82 T 14-10-2018 DB29_01878 064f8958a2c4c13938c6145f24bc5956 121 Gene3D G3DSA:1.10.8.50 1 71 4.8E-29 T 14-10-2018 DB29_01878 064f8958a2c4c13938c6145f24bc5956 121 SUPERFAMILY SSF46946 2 120 4.06E-44 T 14-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 DB29_01878 064f8958a2c4c13938c6145f24bc5956 121 Gene3D G3DSA:4.10.910.10 72 121 9.6E-25 T 14-10-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB29_01878 064f8958a2c4c13938c6145f24bc5956 121 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 6.0E-52 T 14-10-2018 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 DB29_01878 064f8958a2c4c13938c6145f24bc5956 121 PIRSF PIRSF002134 1 121 1.5E-43 T 14-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB29_01878 064f8958a2c4c13938c6145f24bc5956 121 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 14-10-2018 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB29_01878 064f8958a2c4c13938c6145f24bc5956 121 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 118 27.775 T 14-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB29_01878 064f8958a2c4c13938c6145f24bc5956 121 Pfam PF00416 Ribosomal protein S13/S18 3 108 1.2E-32 T 14-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB29_01047 fdab155af22474bf50a5a13958da0853 670 SUPERFAMILY SSF53335 6 513 1.81E-116 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DB29_01047 fdab155af22474bf50a5a13958da0853 670 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 279 291 2.8E-7 T 14-10-2018 DB29_01047 fdab155af22474bf50a5a13958da0853 670 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 173 189 2.8E-7 T 14-10-2018 DB29_01047 fdab155af22474bf50a5a13958da0853 670 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 207 221 2.8E-7 T 14-10-2018 DB29_01047 fdab155af22474bf50a5a13958da0853 670 Gene3D G3DSA:3.40.50.150 154 471 8.6E-89 T 14-10-2018 DB29_01047 fdab155af22474bf50a5a13958da0853 670 Pfam PF02384 N-6 DNA Methylase 155 456 1.1E-56 T 14-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 DB29_01047 fdab155af22474bf50a5a13958da0853 670 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 282 288 - T 14-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 DB29_01047 fdab155af22474bf50a5a13958da0853 670 Pfam PF12161 HsdM N-terminal domain 9 140 6.0E-23 T 14-10-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain DB29_02713 799571c7478379e554c35870333a8b5b 326 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 4 306 7.3E-63 T 14-10-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain DB29_02713 799571c7478379e554c35870333a8b5b 326 Gene3D G3DSA:3.90.245.10 1 317 8.0E-78 T 14-10-2018 IPR036452 Ribonucleoside hydrolase-like DB29_02713 799571c7478379e554c35870333a8b5b 326 SUPERFAMILY SSF53590 2 316 1.26E-78 T 14-10-2018 IPR036452 Ribonucleoside hydrolase-like DB29_02365 62b3a8204dfcf71b6a8ad03379e75416 358 Pfam PF05504 Spore germination B3/ GerAC like, C-terminal 198 355 1.2E-20 T 14-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 DB29_02365 62b3a8204dfcf71b6a8ad03379e75416 358 TIGRFAM TIGR02887 spore_ger_x_C: germination protein, Ger(x)C family 9 357 4.4E-66 T 14-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 DB29_02365 62b3a8204dfcf71b6a8ad03379e75416 358 Gene3D G3DSA:3.30.300.210 215 358 1.2E-8 T 14-10-2018 IPR038501 Spore germination GerAC superfamily DB29_03474 ae359479b0b7c938cf133f7d1f8578f1 173 SUPERFAMILY SSF52972 5 166 3.79E-39 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like DB29_03474 ae359479b0b7c938cf133f7d1f8578f1 173 Pfam PF01931 Protein of unknown function DUF84 9 158 1.3E-36 T 14-10-2018 IPR026533 Non-canonical purine NTP phosphatase/PRRC1 DB29_03474 ae359479b0b7c938cf133f7d1f8578f1 173 Gene3D G3DSA:3.90.950.10 2 172 4.6E-41 T 14-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like DB29_01569 f122d4528fcc0068f7519528ce1978c6 230 Gene3D G3DSA:1.10.10.10 1 74 7.9E-22 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_01569 f122d4528fcc0068f7519528ce1978c6 230 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 73 7.5E-19 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DB29_01569 f122d4528fcc0068f7519528ce1978c6 230 SMART SM00345 14 73 2.1E-19 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DB29_01569 f122d4528fcc0068f7519528ce1978c6 230 SUPERFAMILY SSF46785 1 77 2.22E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_01569 f122d4528fcc0068f7519528ce1978c6 230 SUPERFAMILY SSF48008 91 222 1.83E-24 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DB29_01569 f122d4528fcc0068f7519528ce1978c6 230 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 33 47 6.7E-8 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DB29_01569 f122d4528fcc0068f7519528ce1978c6 230 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 47 63 6.7E-8 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DB29_01569 f122d4528fcc0068f7519528ce1978c6 230 Pfam PF07729 FCD domain 95 216 3.3E-24 T 14-10-2018 IPR011711 GntR, C-terminal DB29_01569 f122d4528fcc0068f7519528ce1978c6 230 SMART SM00895 94 217 1.9E-19 T 14-10-2018 IPR011711 GntR, C-terminal DB29_01569 f122d4528fcc0068f7519528ce1978c6 230 Gene3D G3DSA:1.20.120.530 89 225 2.6E-25 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DB29_03902 9af3556c235479a168d81a33e867a205 182 TIGRFAM TIGR02894 DNA_bind_RsfA: transcription factor, RsfA family 4 80 3.1E-39 T 14-10-2018 IPR014243 Transcription factor, RsfA DB29_03463 c21a2a90c47c0a508380a900934360ff 410 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 185 409 6.2E-68 T 14-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 DB29_03463 c21a2a90c47c0a508380a900934360ff 410 SUPERFAMILY SSF47005 114 157 4.84E-12 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 DB29_03463 c21a2a90c47c0a508380a900934360ff 410 SUPERFAMILY SSF52777 185 410 4.31E-64 T 14-10-2018 DB29_03463 c21a2a90c47c0a508380a900934360ff 410 Gene3D G3DSA:4.10.320.10 111 166 6.1E-17 T 14-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 DB29_03463 c21a2a90c47c0a508380a900934360ff 410 Pfam PF00364 Biotin-requiring enzyme 3 75 1.4E-11 T 14-10-2018 IPR000089 Biotin/lipoyl attachment DB29_03463 c21a2a90c47c0a508380a900934360ff 410 SUPERFAMILY SSF51230 3 91 8.11E-21 T 14-10-2018 IPR011053 Single hybrid motif DB29_03463 c21a2a90c47c0a508380a900934360ff 410 Gene3D G3DSA:3.30.559.10 167 408 3.6E-69 T 14-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 DB29_03463 c21a2a90c47c0a508380a900934360ff 410 Pfam PF02817 e3 binding domain 119 154 9.4E-16 T 14-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 DB29_03463 c21a2a90c47c0a508380a900934360ff 410 Gene3D G3DSA:2.40.50.100 2 100 9.9E-22 T 14-10-2018 DB29_00704 29e278f6dd85d9670b26eaa797d7f019 199 Pfam PF01693 Caulimovirus viroplasmin 5 47 3.8E-21 T 14-10-2018 IPR011320 Ribonuclease H1, N-terminal DB29_00704 29e278f6dd85d9670b26eaa797d7f019 199 Gene3D G3DSA:3.30.420.10 68 197 8.0E-46 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 DB29_00704 29e278f6dd85d9670b26eaa797d7f019 199 SUPERFAMILY SSF55658 5 49 1.88E-15 T 14-10-2018 IPR009027 Ribosomal protein L9/RNase H1, N-terminal DB29_00704 29e278f6dd85d9670b26eaa797d7f019 199 PIRSF PIRSF037839 1 199 6.2E-104 T 14-10-2018 IPR017290 Ribonuclease H, Bacteroides-type GO:0004523 DB29_00704 29e278f6dd85d9670b26eaa797d7f019 199 Gene3D G3DSA:3.40.970.10 2 53 2.3E-20 T 14-10-2018 IPR037056 Ribonuclease H1, N-terminal domain superfamily DB29_00704 29e278f6dd85d9670b26eaa797d7f019 199 SUPERFAMILY SSF53098 70 195 1.16E-24 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily DB29_02844 c9cbdeebb790342b2a28186fecc4b5c0 316 SUPERFAMILY SSF53807 34 307 1.18E-53 T 14-10-2018 DB29_02844 c9cbdeebb790342b2a28186fecc4b5c0 316 Gene3D G3DSA:3.40.50.1980 137 311 7.7E-47 T 14-10-2018 DB29_02844 c9cbdeebb790342b2a28186fecc4b5c0 316 Gene3D G3DSA:3.40.50.1980 30 134 5.9E-15 T 14-10-2018 DB29_02844 c9cbdeebb790342b2a28186fecc4b5c0 316 Pfam PF01497 Periplasmic binding protein 54 287 2.1E-36 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain DB29_02964 1a347af989e51297462175d674f82115 363 Gene3D G3DSA:2.40.390.10 226 337 1.1E-7 T 14-10-2018 IPR024071 Protein of unknown function DUF917, C-terminal DB29_02964 1a347af989e51297462175d674f82115 363 Pfam PF06032 Protein of unknown function (DUF917) 8 354 2.8E-126 T 14-10-2018 IPR010318 Protein of unknown function DUF917 DB29_02964 1a347af989e51297462175d674f82115 363 Gene3D G3DSA:3.40.1610.10 3 218 7.4E-61 T 14-10-2018 IPR027479 Protein of unknown function DUF917, N-terminal DB29_02964 1a347af989e51297462175d674f82115 363 SUPERFAMILY SSF160991 1 355 4.32E-123 T 14-10-2018 DB29_00873 de5fe5ec6f14b6d22db777bd67b7bc74 234 Pfam PF03575 Peptidase family S51 4 199 1.4E-61 T 14-10-2018 IPR005320 Peptidase S51 GO:0006508|GO:0008236 DB29_00873 de5fe5ec6f14b6d22db777bd67b7bc74 234 SUPERFAMILY SSF52317 4 197 2.5E-29 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like DB29_00873 de5fe5ec6f14b6d22db777bd67b7bc74 234 Gene3D G3DSA:3.40.50.880 21 222 4.6E-40 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like DB29_01229 d7a6ecdca169990911144798e4f93c1d 422 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 311 414 3.3E-13 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DB29_01229 d7a6ecdca169990911144798e4f93c1d 422 SMART SM00387 307 416 1.2E-19 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DB29_01229 d7a6ecdca169990911144798e4f93c1d 422 Gene3D G3DSA:3.30.565.10 280 421 5.2E-24 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB29_01229 d7a6ecdca169990911144798e4f93c1d 422 PRINTS PR00344 Bacterial sensor protein C-terminal signature 378 396 5.1E-5 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB29_01229 d7a6ecdca169990911144798e4f93c1d 422 PRINTS PR00344 Bacterial sensor protein C-terminal signature 344 358 5.1E-5 T 14-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 DB29_01229 d7a6ecdca169990911144798e4f93c1d 422 SUPERFAMILY SSF55874 267 413 3.27E-23 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB29_02309 0c9197c0575b9f7d8d05a5bdfb672836 281 SUPERFAMILY SSF48179 183 281 5.02E-35 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 DB29_02309 0c9197c0575b9f7d8d05a5bdfb672836 281 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 181 206 - T 14-10-2018 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 DB29_02309 0c9197c0575b9f7d8d05a5bdfb672836 281 Gene3D G3DSA:1.10.1040.10 191 276 3.8E-37 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 DB29_02309 0c9197c0575b9f7d8d05a5bdfb672836 281 SUPERFAMILY SSF51735 1 183 7.09E-56 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_02309 0c9197c0575b9f7d8d05a5bdfb672836 281 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 184 280 4.8E-36 T 14-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 DB29_02309 0c9197c0575b9f7d8d05a5bdfb672836 281 PIRSF PIRSF000105 1 281 1.3E-82 T 14-10-2018 IPR022694 3-hydroxyacyl-CoA dehydrogenase GO:0003857|GO:0006631|GO:0055114|GO:0070403 DB29_02309 0c9197c0575b9f7d8d05a5bdfb672836 281 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 5 181 5.8E-62 T 14-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 DB29_02309 0c9197c0575b9f7d8d05a5bdfb672836 281 Gene3D G3DSA:3.40.50.720 1 186 6.5E-67 T 14-10-2018 DB29_02046 40d9cb9a690fdfc5641f55f04dd6787f 429 Gene3D G3DSA:2.60.410.10 295 398 3.2E-20 T 14-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 DB29_02046 40d9cb9a690fdfc5641f55f04dd6787f 429 Gene3D G3DSA:3.40.710.10 15 292 8.5E-93 T 14-10-2018 DB29_02046 40d9cb9a690fdfc5641f55f04dd6787f 429 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 18 272 8.1E-78 T 14-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 DB29_02046 40d9cb9a690fdfc5641f55f04dd6787f 429 SUPERFAMILY SSF56601 2 292 1.52E-76 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like DB29_02046 40d9cb9a690fdfc5641f55f04dd6787f 429 SMART SM00936 292 398 4.7E-22 T 14-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 DB29_02046 40d9cb9a690fdfc5641f55f04dd6787f 429 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 292 398 9.7E-16 T 14-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 DB29_02046 40d9cb9a690fdfc5641f55f04dd6787f 429 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 136 149 1.7E-14 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 DB29_02046 40d9cb9a690fdfc5641f55f04dd6787f 429 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 52 63 1.7E-14 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 DB29_02046 40d9cb9a690fdfc5641f55f04dd6787f 429 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 109 126 1.7E-14 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 DB29_02046 40d9cb9a690fdfc5641f55f04dd6787f 429 SUPERFAMILY SSF69189 284 378 2.55E-17 T 14-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 DB29_04351 0c745b44dd7ef4cf494998ebe521ea20 163 Pfam PF11122 Inner spore coat protein D 47 135 8.2E-33 T 14-10-2018 IPR020108 Spore coat protein CotD DB29_04351 0c745b44dd7ef4cf494998ebe521ea20 163 ProDom PD057197 SPORE COAT CAPSID D INNER D COTD SPORULATION 46 107 3.0E-22 T 14-10-2018 IPR020108 Spore coat protein CotD DB29_00551 f638e1761ce30f5de8e044812b8853cb 296 Pfam PF00440 Bacterial regulatory proteins, tetR family 9 51 3.2E-12 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DB29_00551 f638e1761ce30f5de8e044812b8853cb 296 SUPERFAMILY SSF46689 3 68 2.14E-15 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DB29_00551 f638e1761ce30f5de8e044812b8853cb 296 Gene3D G3DSA:1.10.357.10 2 181 5.3E-24 T 14-10-2018 DB29_00551 f638e1761ce30f5de8e044812b8853cb 296 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 8 21 1.4E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DB29_00551 f638e1761ce30f5de8e044812b8853cb 296 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 29 52 1.4E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DB29_00551 f638e1761ce30f5de8e044812b8853cb 296 ProSitePatterns PS01081 TetR-type HTH domain signature. 20 51 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site DB29_01062 8395d09c0c2a31b0f530c0ea8824635d 319 PIRSF PIRSF002849 2 313 7.1E-133 T 14-10-2018 DB29_01062 8395d09c0c2a31b0f530c0ea8824635d 319 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 39 169 3.8E-63 T 14-10-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 DB29_01062 8395d09c0c2a31b0f530c0ea8824635d 319 SUPERFAMILY SSF52540 4 294 6.0E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_01062 8395d09c0c2a31b0f530c0ea8824635d 319 Gene3D G3DSA:1.10.8.300 200 308 3.2E-33 T 14-10-2018 DB29_01062 8395d09c0c2a31b0f530c0ea8824635d 319 Gene3D G3DSA:3.40.50.300 20 186 1.3E-46 T 14-10-2018 DB29_03188 4585fcf061adae51ce5577353647415c 256 SUPERFAMILY SSF52266 69 253 6.0E-14 T 14-10-2018 DB29_03188 4585fcf061adae51ce5577353647415c 256 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 81 243 1.4E-7 T 14-10-2018 IPR013830 SGNH hydrolase-type esterase domain DB29_03188 4585fcf061adae51ce5577353647415c 256 Gene3D G3DSA:3.40.50.1110 33 253 2.9E-14 T 14-10-2018 IPR036514 SGNH hydrolase superfamily DB29_01942 d4b15a3430afe0566a770c5c1ad629f8 477 PRINTS PR00095 Anthranilate synthase component I signature 397 411 3.0E-20 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 DB29_01942 d4b15a3430afe0566a770c5c1ad629f8 477 PRINTS PR00095 Anthranilate synthase component I signature 412 426 3.0E-20 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 DB29_01942 d4b15a3430afe0566a770c5c1ad629f8 477 PRINTS PR00095 Anthranilate synthase component I signature 303 316 3.0E-20 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 DB29_01942 d4b15a3430afe0566a770c5c1ad629f8 477 PRINTS PR00095 Anthranilate synthase component I signature 317 330 3.0E-20 T 14-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 DB29_01942 d4b15a3430afe0566a770c5c1ad629f8 477 Pfam PF00425 chorismate binding enzyme 202 455 3.6E-99 T 14-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal DB29_01942 d4b15a3430afe0566a770c5c1ad629f8 477 SUPERFAMILY SSF56322 16 467 1.96E-150 T 14-10-2018 IPR005801 ADC synthase GO:0009058 DB29_01942 d4b15a3430afe0566a770c5c1ad629f8 477 Gene3D G3DSA:3.60.120.10 2 473 3.0E-168 T 14-10-2018 IPR005801 ADC synthase GO:0009058 DB29_01942 d4b15a3430afe0566a770c5c1ad629f8 477 TIGRFAM TIGR00553 pabB: aminodeoxychorismate synthase, component I 108 458 1.4E-99 T 14-10-2018 IPR005802 Para-aminobenzoate synthase, component I GO:0009396 KEGG: 00790+2.6.1.85|MetaCyc: PWY-6543 DB29_01942 d4b15a3430afe0566a770c5c1ad629f8 477 TIGRFAM TIGR01824 PabB-clade2: aminodeoxychorismate synthase, component I 105 459 4.8E-127 T 14-10-2018 IPR010118 Para-aminobenzoate synthase/anthranilate synthase, component I DB29_01942 d4b15a3430afe0566a770c5c1ad629f8 477 Pfam PF04715 Anthranilate synthase component I, N terminal region 27 155 4.2E-31 T 14-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 DB29_01962 b81161dbcbfde176ad256540efbbf6ce 84 SMART SM00363 1 64 3.0E-10 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB29_01962 b81161dbcbfde176ad256540efbbf6ce 84 Gene3D G3DSA:3.10.290.10 1 84 2.4E-24 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 DB29_01962 b81161dbcbfde176ad256540efbbf6ce 84 SUPERFAMILY SSF55174 1 77 1.83E-20 T 14-10-2018 DB29_01962 b81161dbcbfde176ad256540efbbf6ce 84 Pfam PF01479 S4 domain 1 47 6.1E-12 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB29_01962 b81161dbcbfde176ad256540efbbf6ce 84 PIRSF PIRSF038881 1 84 4.4E-34 T 14-10-2018 IPR025490 RNA-binding protein, HP1423 type DB29_02611 e63531108cf9d0636d84693a709768a8 153 TIGRFAM TIGR00689 rpiB_lacA_lacB: sugar-phosphate isomerase, RpiB/LacA/LacB family 3 145 1.6E-45 T 14-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 DB29_02611 e63531108cf9d0636d84693a709768a8 153 PIRSF PIRSF005384 1 147 1.9E-52 T 14-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 DB29_02611 e63531108cf9d0636d84693a709768a8 153 SUPERFAMILY SSF89623 2 144 7.19E-53 T 14-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 DB29_02611 e63531108cf9d0636d84693a709768a8 153 Gene3D G3DSA:3.40.1400.10 1 147 6.3E-53 T 14-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 DB29_02611 e63531108cf9d0636d84693a709768a8 153 TIGRFAM TIGR01120 rpiB: ribose 5-phosphate isomerase B 2 143 1.1E-45 T 14-10-2018 IPR004785 Ribose 5-phosphate isomerase B GO:0004751|GO:0006098 DB29_02611 e63531108cf9d0636d84693a709768a8 153 Pfam PF02502 Ribose/Galactose Isomerase 3 140 2.4E-50 T 14-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 DB29_02651 b2c04b92a8140383bdf964ba4e89ea27 159 SUPERFAMILY SSF55804 4 149 1.57E-35 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 DB29_02651 b2c04b92a8140383bdf964ba4e89ea27 159 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 5 149 1.1E-32 T 14-10-2018 IPR002178 PTS EIIA type-2 domain DB29_02651 b2c04b92a8140383bdf964ba4e89ea27 159 Gene3D G3DSA:3.40.930.10 1 157 2.5E-41 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 DB29_04290 0f2d25e382eac4432cea46a152559851 380 Pfam PF00534 Glycosyl transferases group 1 191 352 6.9E-39 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 DB29_04290 0f2d25e382eac4432cea46a152559851 380 TIGRFAM TIGR03999 thiol_BshA: N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA 5 375 3.2E-173 T 14-10-2018 IPR023881 N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA GO:0016757|GO:0071793 DB29_04290 0f2d25e382eac4432cea46a152559851 380 Gene3D G3DSA:3.40.50.2000 177 358 1.2E-113 T 14-10-2018 DB29_04290 0f2d25e382eac4432cea46a152559851 380 Gene3D G3DSA:3.40.50.2000 23 371 1.2E-113 T 14-10-2018 DB29_04290 0f2d25e382eac4432cea46a152559851 380 SUPERFAMILY SSF53756 10 376 1.11E-86 T 14-10-2018 DB29_04290 0f2d25e382eac4432cea46a152559851 380 Pfam PF13439 Glycosyltransferase Family 4 14 180 1.3E-25 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 DB29_04006 acd636b41d4eb4cb6da68422a6d53faf 148 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 97 144 5.7E-10 T 14-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain DB29_04006 acd636b41d4eb4cb6da68422a6d53faf 148 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 4 148 2.0E-46 T 14-10-2018 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 DB29_04006 acd636b41d4eb4cb6da68422a6d53faf 148 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 13 33 - T 14-10-2018 IPR019776 Flagellar basal body rod protein, conserved site DB29_04006 acd636b41d4eb4cb6da68422a6d53faf 148 Pfam PF00460 Flagella basal body rod protein 7 35 1.0E-9 T 14-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 DB29_00945 5b177df5e570171382c99c6c08d4b6fa 252 Pfam PF00106 short chain dehydrogenase 10 198 3.5E-60 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_00945 5b177df5e570171382c99c6c08d4b6fa 252 SUPERFAMILY SSF51735 9 249 1.4E-79 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_00945 5b177df5e570171382c99c6c08d4b6fa 252 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 10 202 0.0027 T 14-10-2018 DB29_00945 5b177df5e570171382c99c6c08d4b6fa 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 213 233 3.1E-44 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_00945 5b177df5e570171382c99c6c08d4b6fa 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 3.1E-44 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_00945 5b177df5e570171382c99c6c08d4b6fa 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 3.1E-44 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_00945 5b177df5e570171382c99c6c08d4b6fa 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 3.1E-44 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_00945 5b177df5e570171382c99c6c08d4b6fa 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 3.1E-44 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_00945 5b177df5e570171382c99c6c08d4b6fa 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 3.1E-44 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_00945 5b177df5e570171382c99c6c08d4b6fa 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 5.2E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_00945 5b177df5e570171382c99c6c08d4b6fa 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 5.2E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_00945 5b177df5e570171382c99c6c08d4b6fa 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 145 5.2E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_00945 5b177df5e570171382c99c6c08d4b6fa 252 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 144 172 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 DB29_00945 5b177df5e570171382c99c6c08d4b6fa 252 Gene3D G3DSA:3.40.50.720 1 250 2.4E-83 T 14-10-2018 DB29_01300 5ae87b314afa050250d7d1d27ff8fb62 154 Pfam PF00583 Acetyltransferase (GNAT) family 36 138 8.7E-20 T 14-10-2018 IPR000182 GNAT domain DB29_01300 5ae87b314afa050250d7d1d27ff8fb62 154 SUPERFAMILY SSF55729 1 142 1.06E-28 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase DB29_01300 5ae87b314afa050250d7d1d27ff8fb62 154 Gene3D G3DSA:3.40.630.30 1 147 2.3E-31 T 14-10-2018 DB29_03096 9fcd08e369a06083c29f97bb3f6c5513 257 Pfam PF00005 ABC transporter 22 165 8.7E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB29_03096 9fcd08e369a06083c29f97bb3f6c5513 257 SMART SM00382 30 212 7.1E-7 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_03096 9fcd08e369a06083c29f97bb3f6c5513 257 SUPERFAMILY SSF52540 6 227 1.22E-63 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_03096 9fcd08e369a06083c29f97bb3f6c5513 257 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB29_03096 9fcd08e369a06083c29f97bb3f6c5513 257 Gene3D G3DSA:3.40.50.300 1 245 4.6E-70 T 14-10-2018 DB29_03138 caef986aedde6b917945fd00c46cc8ba 303 ProSitePatterns PS00516 Alkylbase DNA glycosidases alkA family signature. 234 258 - T 14-10-2018 IPR000035 Alkylbase DNA glycosidase, conserved site GO:0003905|GO:0006281 DB29_03138 caef986aedde6b917945fd00c46cc8ba 303 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 138 287 3.2E-14 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 DB29_03138 caef986aedde6b917945fd00c46cc8ba 303 SUPERFAMILY SSF55945 63 125 3.85E-5 T 14-10-2018 DB29_03138 caef986aedde6b917945fd00c46cc8ba 303 Gene3D G3DSA:1.10.1670.40 106 301 5.5E-41 T 14-10-2018 DB29_03138 caef986aedde6b917945fd00c46cc8ba 303 SUPERFAMILY SSF48150 118 302 2.09E-43 T 14-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 DB29_03138 caef986aedde6b917945fd00c46cc8ba 303 Pfam PF07934 8-oxoguanine DNA glycosylase, N-terminal domain 35 134 1.2E-12 T 14-10-2018 IPR012904 8-oxoguanine DNA glycosylase, N-terminal GO:0003684|GO:0006289|GO:0008534 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357|Reactome: R-HSA-5649702 DB29_03138 caef986aedde6b917945fd00c46cc8ba 303 Gene3D G3DSA:1.10.340.30 127 250 5.5E-41 T 14-10-2018 DB29_03138 caef986aedde6b917945fd00c46cc8ba 303 SMART SM00478 139 303 4.2E-39 T 14-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 DB29_02772 144daaa0ec2c756307ce8a64881621b5 477 PIRSF PIRSF005690 1 477 2.0E-175 T 14-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 DB29_02772 144daaa0ec2c756307ce8a64881621b5 477 Pfam PF03323 Bacillus/Clostridium GerA spore germination protein 10 462 2.0E-154 T 14-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 DB29_04083 12261a301fcc9a0e082db6abeb1a2331 220 Gene3D G3DSA:3.40.50.300 2 216 9.4E-23 T 14-10-2018 DB29_04083 12261a301fcc9a0e082db6abeb1a2331 220 SUPERFAMILY SSF52540 4 213 1.65E-16 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_00844 b17ee6bff4e524bf7a5ce1d2bb96b70c 291 SUPERFAMILY SSF161098 9 291 1.14E-57 T 14-10-2018 IPR035906 MetI-like superfamily DB29_00844 b17ee6bff4e524bf7a5ce1d2bb96b70c 291 Gene3D G3DSA:1.10.3720.10 3 282 6.8E-69 T 14-10-2018 IPR035906 MetI-like superfamily DB29_00844 b17ee6bff4e524bf7a5ce1d2bb96b70c 291 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 91 283 1.0E-19 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DB29_02081 5802093437176c77cf19591844a8b86b 147 Gene3D G3DSA:3.40.5.10 1 52 2.8E-25 T 14-10-2018 IPR036935 Ribosomal protein L9, N-terminal domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB29_02081 5802093437176c77cf19591844a8b86b 147 Pfam PF03948 Ribosomal protein L9, C-terminal domain 63 146 2.6E-29 T 14-10-2018 IPR020069 Ribosomal protein L9, C-terminal DB29_02081 5802093437176c77cf19591844a8b86b 147 SUPERFAMILY SSF55658 1 57 5.58E-19 T 14-10-2018 IPR009027 Ribosomal protein L9/RNase H1, N-terminal DB29_02081 5802093437176c77cf19591844a8b86b 147 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 47 6.0E-24 T 14-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB29_02081 5802093437176c77cf19591844a8b86b 147 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 146 2.0E-49 T 14-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 DB29_02081 5802093437176c77cf19591844a8b86b 147 SUPERFAMILY SSF55653 56 146 2.09E-27 T 14-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily DB29_02081 5802093437176c77cf19591844a8b86b 147 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 147 26.277 T 14-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 DB29_02081 5802093437176c77cf19591844a8b86b 147 Gene3D G3DSA:3.10.430.100 60 147 9.4E-31 T 14-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily DB29_02081 5802093437176c77cf19591844a8b86b 147 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 14-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB29_02997 52f0b5ea02a54e3a898eed7118160448 278 SUPERFAMILY SSF161098 6 278 8.78E-79 T 14-10-2018 IPR035906 MetI-like superfamily DB29_02997 52f0b5ea02a54e3a898eed7118160448 278 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 97 271 4.4E-26 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DB29_02997 52f0b5ea02a54e3a898eed7118160448 278 Gene3D G3DSA:1.10.3720.10 2 265 1.1E-72 T 14-10-2018 IPR035906 MetI-like superfamily DB29_03201 d47a44aaeb79b2dcfd3b4c9792124a0e 311 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 232 275 2.3E-9 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DB29_03201 d47a44aaeb79b2dcfd3b4c9792124a0e 311 Gene3D G3DSA:3.40.50.300 1 305 1.1E-86 T 14-10-2018 DB29_03201 d47a44aaeb79b2dcfd3b4c9792124a0e 311 Pfam PF00005 ABC transporter 31 180 6.6E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB29_03201 d47a44aaeb79b2dcfd3b4c9792124a0e 311 SMART SM00382 39 230 7.5E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_03201 d47a44aaeb79b2dcfd3b4c9792124a0e 311 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB29_03201 d47a44aaeb79b2dcfd3b4c9792124a0e 311 SUPERFAMILY SSF52540 3 252 8.79E-72 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_02036 7af98db11f47b7308655a71eab300df9 399 SUPERFAMILY SSF53383 19 394 9.28E-107 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DB29_02036 7af98db11f47b7308655a71eab300df9 399 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 11 393 1.2E-127 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 DB29_02036 7af98db11f47b7308655a71eab300df9 399 Gene3D G3DSA:3.40.640.10 1 260 6.6E-78 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DB29_02036 7af98db11f47b7308655a71eab300df9 399 PIRSF PIRSF001434 1 396 1.7E-135 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 DB29_02036 7af98db11f47b7308655a71eab300df9 399 Gene3D G3DSA:3.90.1150.10 261 398 6.2E-45 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DB29_03034 86202b8cce1915ca349ea4dda7b257d5 322 Gene3D G3DSA:1.10.8.450 245 282 7.1E-44 T 14-10-2018 DB29_03034 86202b8cce1915ca349ea4dda7b257d5 322 SUPERFAMILY SSF53850 29 259 7.25E-43 T 14-10-2018 DB29_03034 86202b8cce1915ca349ea4dda7b257d5 322 TIGRFAM TIGR01728 SsuA_fam: ABC transporter, substrate-binding protein, aliphatic sulfonates family 30 320 3.9E-59 T 14-10-2018 IPR010067 Aliphatic sulfonates-binding protein GO:0016020|GO:0042626 DB29_03034 86202b8cce1915ca349ea4dda7b257d5 322 Gene3D G3DSA:3.40.190.10 30 301 7.1E-44 T 14-10-2018 DB29_03034 86202b8cce1915ca349ea4dda7b257d5 322 Pfam PF13379 NMT1-like family 26 256 4.3E-24 T 14-10-2018 DB29_03034 86202b8cce1915ca349ea4dda7b257d5 322 Gene3D G3DSA:3.40.190.10 109 209 7.1E-44 T 14-10-2018 DB29_02777 5d1c34662162b857148afe551724c05c 325 Pfam PF01497 Periplasmic binding protein 107 295 6.2E-28 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain DB29_02777 5d1c34662162b857148afe551724c05c 325 Gene3D G3DSA:3.40.50.1980 170 325 3.0E-32 T 14-10-2018 DB29_02777 5d1c34662162b857148afe551724c05c 325 Gene3D G3DSA:3.40.50.1980 45 169 7.3E-33 T 14-10-2018 DB29_02777 5d1c34662162b857148afe551724c05c 325 SUPERFAMILY SSF53807 51 318 2.86E-54 T 14-10-2018 DB29_00626 be40b5237d33637b9f954a5bcb4bccbb 120 TIGRFAM TIGR03577 EF_0830: conserved hypothetical protein EF_0830/AHA_3911 4 118 4.6E-67 T 14-10-2018 IPR020034 Conserved hypothetical protein CHP03577, EF0830/AHA3911 DB29_00626 be40b5237d33637b9f954a5bcb4bccbb 120 Pfam PF14272 Glycine-rich SFCGS 4 117 1.8E-63 T 14-10-2018 IPR020034 Conserved hypothetical protein CHP03577, EF0830/AHA3911 DB29_03538 ef40916abe2c22a7bcdeed73cea513b9 149 SMART SM00344 1 107 2.5E-24 T 14-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 DB29_03538 ef40916abe2c22a7bcdeed73cea513b9 149 SUPERFAMILY SSF54909 64 136 1.39E-12 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel DB29_03538 ef40916abe2c22a7bcdeed73cea513b9 149 ProSitePatterns PS00519 AsnC-type HTH domain signature. 19 45 - T 14-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site DB29_03538 ef40916abe2c22a7bcdeed73cea513b9 149 Pfam PF13412 Winged helix-turn-helix DNA-binding 1 48 8.2E-15 T 14-10-2018 DB29_03538 ef40916abe2c22a7bcdeed73cea513b9 149 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 6.2E-13 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 DB29_03538 ef40916abe2c22a7bcdeed73cea513b9 149 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 6.2E-13 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 DB29_03538 ef40916abe2c22a7bcdeed73cea513b9 149 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 6.2E-13 T 14-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 DB29_03538 ef40916abe2c22a7bcdeed73cea513b9 149 SUPERFAMILY SSF46785 1 60 3.09E-14 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_03538 ef40916abe2c22a7bcdeed73cea513b9 149 Gene3D G3DSA:3.30.70.920 52 135 1.1E-15 T 14-10-2018 DB29_03538 ef40916abe2c22a7bcdeed73cea513b9 149 Gene3D G3DSA:1.10.10.10 1 51 2.6E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_03538 ef40916abe2c22a7bcdeed73cea513b9 149 Pfam PF01037 Lrp/AsnC ligand binding domain 74 133 2.8E-11 T 14-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain DB29_00967 1520800549005aaeffd42253b5c7106c 210 Gene3D G3DSA:3.10.490.10 1 202 5.0E-16 T 14-10-2018 DB29_01014 de7fc80dff4a2eb143f8ad30777a36d2 510 Pfam PF03806 AbgT putative transporter family 13 508 3.0E-204 T 14-10-2018 IPR004697 p-Aminobenzoyl-glutamate transport protein AbgT GO:0015558|GO:1902604 DB29_01428 03fd16f9026765058deb3f9c60a9c079 369 TIGRFAM TIGR03565 alk_sulf_monoox: alkanesulfonate monooxygenase, FMNH(2)-dependent 3 346 2.5E-188 T 14-10-2018 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent GO:0008726|GO:0055114 KEGG: 00920+1.14.14.5 DB29_01428 03fd16f9026765058deb3f9c60a9c079 369 Pfam PF00296 Luciferase-like monooxygenase 1 323 3.5E-86 T 14-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 DB29_01428 03fd16f9026765058deb3f9c60a9c079 369 Hamap MF_01229 Alkanesulfonate monooxygenase [ssuD]. 1 369 77.438 T 14-10-2018 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent GO:0008726|GO:0055114 KEGG: 00920+1.14.14.5 DB29_01428 03fd16f9026765058deb3f9c60a9c079 369 Gene3D G3DSA:3.20.20.30 1 360 6.3E-141 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 DB29_01428 03fd16f9026765058deb3f9c60a9c079 369 SUPERFAMILY SSF51679 1 349 1.2E-94 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 DB29_00408 6b47df6e1b449748488755766f4af848 267 Pfam PF00005 ABC transporter 27 184 3.4E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB29_00408 6b47df6e1b449748488755766f4af848 267 SUPERFAMILY SSF52540 6 254 1.08E-68 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_00408 6b47df6e1b449748488755766f4af848 267 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 236 264 4.1E-6 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DB29_00408 6b47df6e1b449748488755766f4af848 267 Gene3D G3DSA:3.40.50.300 4 266 1.2E-87 T 14-10-2018 DB29_00408 6b47df6e1b449748488755766f4af848 267 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB29_00408 6b47df6e1b449748488755766f4af848 267 SMART SM00382 35 234 5.3E-18 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_03311 effa58c75f6bd14db0ef8692009459a3 120 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 3 117 4.7E-33 T 14-10-2018 IPR006504 Transcriptional regulator Spx/MgsR DB29_03311 effa58c75f6bd14db0ef8692009459a3 120 Gene3D G3DSA:3.40.30.10 1 116 2.7E-46 T 14-10-2018 DB29_03311 effa58c75f6bd14db0ef8692009459a3 120 Pfam PF03960 ArsC family 7 115 3.5E-16 T 14-10-2018 IPR006660 Arsenate reductase-like DB29_03311 effa58c75f6bd14db0ef8692009459a3 120 SUPERFAMILY SSF52833 3 117 4.98E-36 T 14-10-2018 IPR036249 Thioredoxin-like superfamily DB29_03253 f566eba20f2e6202fb0cd7472f12944d 206 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 27 98 1.6E-35 T 14-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 DB29_03253 f566eba20f2e6202fb0cd7472f12944d 206 Hamap MF_01019 Histidine biosynthesis bifunctional protein HisIE [hisI]. 2 205 37.954 T 14-10-2018 IPR023019 Histidine biosynthesis bifunctional protein HisIE GO:0000105|GO:0004635|GO:0004636 KEGG: 00340+3.6.1.31+3.5.4.19 DB29_03253 f566eba20f2e6202fb0cd7472f12944d 206 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 114 200 20.501 T 14-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 DB29_03253 f566eba20f2e6202fb0cd7472f12944d 206 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 49 98 6.0E-25 T 14-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 DB29_03253 f566eba20f2e6202fb0cd7472f12944d 206 Gene3D G3DSA:3.10.20.400 2 90 4.9E-41 T 14-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 DB29_03253 f566eba20f2e6202fb0cd7472f12944d 206 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 117 200 2.0E-31 T 14-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 DB29_03253 f566eba20f2e6202fb0cd7472f12944d 206 SUPERFAMILY SSF101386 116 204 2.06E-26 T 14-10-2018 DB29_03253 f566eba20f2e6202fb0cd7472f12944d 206 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 117 204 6.0E-18 T 14-10-2018 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 DB29_03253 f566eba20f2e6202fb0cd7472f12944d 206 Hamap MF_01021 Phosphoribosyl-AMP cyclohydrolase [hisI]. 1 103 29.32 T 14-10-2018 IPR026660 Phosphoribosyl-AMP cyclohydrolase GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 DB29_03253 f566eba20f2e6202fb0cd7472f12944d 206 Gene3D G3DSA:1.10.287.1080 113 206 1.2E-32 T 14-10-2018 DB29_03253 f566eba20f2e6202fb0cd7472f12944d 206 SUPERFAMILY SSF141734 3 105 4.58E-48 T 14-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 DB29_03534 cfa300f54eab881cf55b02861306f087 157 ProDom PD021096 MEMBRANE YEAL PRECURSOR SIGNAL PROTEIN TRANSMEMBRANE YTWI HI1074 INTEGRAL SPANNING 20 131 1.0E-48 T 14-10-2018 IPR007382 Uncharacterised protein family UPF0756, transmembrame DB29_03534 cfa300f54eab881cf55b02861306f087 157 Pfam PF04284 Protein of unknown function (DUF441) 7 146 7.0E-47 T 14-10-2018 IPR007382 Uncharacterised protein family UPF0756, transmembrame DB29_03534 cfa300f54eab881cf55b02861306f087 157 Hamap MF_01874 UPF0756 membrane protein YeaL [yeaL]. 3 149 18.748 T 14-10-2018 IPR007382 Uncharacterised protein family UPF0756, transmembrame DB29_00716 69b1dcc85e6951defd039a9fdc25ef5c 363 SUPERFAMILY SSF56512 4 355 1.83E-162 T 14-10-2018 IPR036119 Nitric oxide synthase, N-terminal domain superfamily GO:0004517|GO:0006809|GO:0055114 Reactome: R-HSA-1222556|Reactome: R-HSA-392154 DB29_00716 69b1dcc85e6951defd039a9fdc25ef5c 363 Pfam PF02898 Nitric oxide synthase, oxygenase domain 3 354 6.0E-157 T 14-10-2018 IPR004030 Nitric oxide synthase, N-terminal GO:0004517|GO:0006809|GO:0055114 Reactome: R-HSA-1222556|Reactome: R-HSA-392154 DB29_00716 69b1dcc85e6951defd039a9fdc25ef5c 363 Gene3D G3DSA:3.90.1230.10 186 292 4.4E-144 T 14-10-2018 DB29_00716 69b1dcc85e6951defd039a9fdc25ef5c 363 PIRSF PIRSF037219 1 362 2.4E-182 T 14-10-2018 IPR017142 Nitric oxide synthase, oxygenase subunit GO:0004517|GO:0006809|GO:0020037 KEGG: 00220+1.14.14.47|KEGG: 00330+1.14.14.47 DB29_00716 69b1dcc85e6951defd039a9fdc25ef5c 363 Gene3D G3DSA:3.90.440.10 79 185 4.4E-144 T 14-10-2018 DB29_00716 69b1dcc85e6951defd039a9fdc25ef5c 363 Gene3D G3DSA:3.90.340.10 5 347 4.4E-144 T 14-10-2018 DB29_00716 69b1dcc85e6951defd039a9fdc25ef5c 363 ProSitePatterns PS60001 Nitric oxide synthase (NOS) signature. 62 69 - T 14-10-2018 IPR004030 Nitric oxide synthase, N-terminal GO:0004517|GO:0006809|GO:0055114 Reactome: R-HSA-1222556|Reactome: R-HSA-392154 DB29_02491 2dffb24ade9a970ec7cc315dc8a50b49 255 SUPERFAMILY SSF161098 53 234 3.66E-35 T 14-10-2018 IPR035906 MetI-like superfamily DB29_02491 2dffb24ade9a970ec7cc315dc8a50b49 255 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 76 245 8.1E-27 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DB29_02491 2dffb24ade9a970ec7cc315dc8a50b49 255 Gene3D G3DSA:1.10.3720.10 49 243 5.5E-27 T 14-10-2018 IPR035906 MetI-like superfamily DB29_02255 9a39c037abbf54fcda9c06877db1dac3 402 Gene3D G3DSA:3.90.1150.10 268 402 3.0E-52 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DB29_02255 9a39c037abbf54fcda9c06877db1dac3 402 PIRSF PIRSF001434 6 402 7.4E-146 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 DB29_02255 9a39c037abbf54fcda9c06877db1dac3 402 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 210 224 - T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 DB29_02255 9a39c037abbf54fcda9c06877db1dac3 402 Gene3D G3DSA:3.40.640.10 16 267 4.4E-81 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DB29_02255 9a39c037abbf54fcda9c06877db1dac3 402 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 19 399 1.3E-128 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 DB29_02255 9a39c037abbf54fcda9c06877db1dac3 402 SUPERFAMILY SSF53383 36 401 3.7E-109 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DB29_04085 1bf3ca513e4a2f1c41df8ddcacfa9ed7 265 Gene3D G3DSA:3.60.21.10 1 264 3.0E-117 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like DB29_04085 1bf3ca513e4a2f1c41df8ddcacfa9ed7 265 TIGRFAM TIGR00282 TIGR00282: metallophosphoesterase, MG_246/BB_0505 family 1 263 1.4E-103 T 14-10-2018 IPR005235 Metallophosphoesterase, YmdB-like DB29_04085 1bf3ca513e4a2f1c41df8ddcacfa9ed7 265 SUPERFAMILY SSF56300 1 254 2.0E-92 T 14-10-2018 DB29_04085 1bf3ca513e4a2f1c41df8ddcacfa9ed7 265 Pfam PF13277 YmdB-like protein 4 254 2.0E-112 T 14-10-2018 IPR005235 Metallophosphoesterase, YmdB-like DB29_04085 1bf3ca513e4a2f1c41df8ddcacfa9ed7 265 PIRSF PIRSF004789 1 263 6.2E-102 T 14-10-2018 IPR005235 Metallophosphoesterase, YmdB-like DB29_03790 d5aacaedee4ed1920c1e797331bb6ed7 170 PIRSF PIRSF021435 1 170 6.0E-54 T 14-10-2018 IPR014198 Stage III sporulation protein AB DB29_03790 d5aacaedee4ed1920c1e797331bb6ed7 170 Pfam PF09548 Stage III sporulation protein AB (spore_III_AB) 2 170 2.1E-49 T 14-10-2018 IPR014198 Stage III sporulation protein AB DB29_03790 d5aacaedee4ed1920c1e797331bb6ed7 170 TIGRFAM TIGR02833 spore_III_AB: stage III sporulation protein AB 2 170 4.2E-56 T 14-10-2018 IPR014198 Stage III sporulation protein AB DB29_02948 514c03262c1e21a21147fc989003226f 559 Hamap MF_00577 Urocanate hydratase [hutU]. 4 552 50.769 T 14-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 DB29_02948 514c03262c1e21a21147fc989003226f 559 Gene3D G3DSA:3.40.1770.10 13 538 5.2E-255 T 14-10-2018 DB29_02948 514c03262c1e21a21147fc989003226f 559 SUPERFAMILY SSF111326 4 551 3.53E-259 T 14-10-2018 IPR036190 Urocanase superfamily KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 DB29_02948 514c03262c1e21a21147fc989003226f 559 TIGRFAM TIGR01228 hutU: urocanate hydratase 8 549 1.1E-295 T 14-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 DB29_02948 514c03262c1e21a21147fc989003226f 559 Pfam PF01175 Urocanase Rossmann-like domain 137 345 5.9E-89 T 14-10-2018 IPR035085 Urocanase, Rossmann-like domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 DB29_02948 514c03262c1e21a21147fc989003226f 559 Gene3D G3DSA:3.40.50.10730 138 345 5.2E-255 T 14-10-2018 IPR038364 Urocanase, central domain superfamily KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 DB29_02948 514c03262c1e21a21147fc989003226f 559 Pfam PF17391 Urocanase N-terminal domain 8 134 6.5E-61 T 14-10-2018 IPR035400 Urocanase, N-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 DB29_02948 514c03262c1e21a21147fc989003226f 559 Pfam PF17392 Urocanase C-terminal domain 348 542 1.6E-95 T 14-10-2018 IPR035401 Urocanase, C-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 DB29_02948 514c03262c1e21a21147fc989003226f 559 ProSitePatterns PS01233 Urocanase signature. 438 453 - T 14-10-2018 IPR023636 Urocanase conserved site GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 DB29_02948 514c03262c1e21a21147fc989003226f 559 PIRSF PIRSF001423 2 557 5.6E-295 T 14-10-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 DB29_01116 db96ab8e891119d09fa651ca197f5c11 145 SUPERFAMILY SSF55804 2 144 7.19E-38 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 DB29_01116 db96ab8e891119d09fa651ca197f5c11 145 Gene3D G3DSA:3.40.930.10 1 145 8.8E-50 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 DB29_01116 db96ab8e891119d09fa651ca197f5c11 145 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 4 145 3.2E-34 T 14-10-2018 IPR002178 PTS EIIA type-2 domain DB29_01405 b98620aa03d1838b2aa0cbddbae3a13f 384 Gene3D G3DSA:3.10.310.10 174 358 1.8E-128 T 14-10-2018 DB29_01405 b98620aa03d1838b2aa0cbddbae3a13f 384 Pfam PF04303 PrpF protein 6 376 6.5E-121 T 14-10-2018 IPR007400 PrpF protein DB29_01405 b98620aa03d1838b2aa0cbddbae3a13f 384 Gene3D G3DSA:3.10.310.10 7 374 1.8E-128 T 14-10-2018 DB29_01405 b98620aa03d1838b2aa0cbddbae3a13f 384 SUPERFAMILY SSF54506 4 169 8.63E-57 T 14-10-2018 DB29_01405 b98620aa03d1838b2aa0cbddbae3a13f 384 SUPERFAMILY SSF54506 172 379 1.15E-52 T 14-10-2018 DB29_02025 525a9c47c0a6a127a1ba5862cb9928f6 296 Gene3D G3DSA:1.10.3720.10 83 294 3.0E-27 T 14-10-2018 IPR035906 MetI-like superfamily DB29_02025 525a9c47c0a6a127a1ba5862cb9928f6 296 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 295 2.7E-32 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DB29_02025 525a9c47c0a6a127a1ba5862cb9928f6 296 SUPERFAMILY SSF161098 90 278 6.67E-32 T 14-10-2018 IPR035906 MetI-like superfamily DB29_02025 525a9c47c0a6a127a1ba5862cb9928f6 296 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 22 72 2.1E-9 T 14-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain DB29_00779 9d3767752f6a317421912af009cc53c8 220 SUPERFAMILY SSF52172 1 123 1.85E-33 T 14-10-2018 IPR011006 CheY-like superfamily DB29_00779 9d3767752f6a317421912af009cc53c8 220 SMART SM00448 2 111 1.3E-37 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DB29_00779 9d3767752f6a317421912af009cc53c8 220 Gene3D G3DSA:1.10.10.10 128 220 8.8E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_00779 9d3767752f6a317421912af009cc53c8 220 SUPERFAMILY SSF46894 123 219 2.72E-22 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DB29_00779 9d3767752f6a317421912af009cc53c8 220 Pfam PF00072 Response regulator receiver domain 4 112 2.9E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DB29_00779 9d3767752f6a317421912af009cc53c8 220 SMART SM00862 145 219 7.7E-17 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DB29_00779 9d3767752f6a317421912af009cc53c8 220 Gene3D G3DSA:3.40.50.2300 1 127 4.3E-32 T 14-10-2018 DB29_00779 9d3767752f6a317421912af009cc53c8 220 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 218 2.3E-17 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DB29_03245 fe907c7d858a538ae47ed629a10b13c3 144 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 93 126 3.7E-11 T 14-10-2018 IPR001451 Hexapeptide repeat DB29_03245 fe907c7d858a538ae47ed629a10b13c3 144 Gene3D G3DSA:2.160.10.10 26 144 1.7E-32 T 14-10-2018 DB29_03245 fe907c7d858a538ae47ed629a10b13c3 144 SUPERFAMILY SSF51161 33 144 3.19E-37 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily DB29_03745 1d93e52445ed61ded6a2838666306f36 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 161 180 3.2E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_03745 1d93e52445ed61ded6a2838666306f36 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 182 199 3.2E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_03745 1d93e52445ed61ded6a2838666306f36 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 217 237 3.2E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_03745 1d93e52445ed61ded6a2838666306f36 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 135 151 3.2E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_03745 1d93e52445ed61ded6a2838666306f36 259 PIRSF PIRSF000094 3 259 2.2E-102 T 14-10-2018 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 DB29_03745 1d93e52445ed61ded6a2838666306f36 259 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 254 1.0E-87 T 14-10-2018 DB29_03745 1d93e52445ed61ded6a2838666306f36 259 SUPERFAMILY SSF51735 8 255 1.05E-67 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_03745 1d93e52445ed61ded6a2838666306f36 259 Gene3D G3DSA:3.40.50.720 10 203 1.7E-38 T 14-10-2018 DB29_03745 1d93e52445ed61ded6a2838666306f36 259 Gene3D G3DSA:1.10.8.400 205 259 1.6E-19 T 14-10-2018 DB29_03307 d619cdf6c3b24dd35b71799b4b0c2738 416 SUPERFAMILY SSF103473 18 413 4.71E-40 T 14-10-2018 IPR036259 MFS transporter superfamily DB29_03307 d619cdf6c3b24dd35b71799b4b0c2738 416 Gene3D G3DSA:1.20.1250.20 12 409 8.5E-39 T 14-10-2018 DB29_03307 d619cdf6c3b24dd35b71799b4b0c2738 416 Pfam PF07690 Major Facilitator Superfamily 25 274 3.5E-18 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DB29_02005 f499d5439df3a514f3f24b446b393a05 109 SUPERFAMILY SSF54913 1 106 1.29E-14 T 14-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta DB29_02005 f499d5439df3a514f3f24b446b393a05 109 Gene3D G3DSA:3.30.70.120 1 103 2.1E-45 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal DB29_02005 f499d5439df3a514f3f24b446b393a05 109 Pfam PF06153 Cyclic-di-AMP receptor 1 109 3.7E-54 T 14-10-2018 IPR010375 Cyclic-di-AMP receptor DB29_00514 9a1bdce6f2c0ec63c869f6e98c29d3f8 49 Pfam PF09501 Probable sporulation protein (Bac_small_yrzI) 1 48 2.5E-19 T 14-10-2018 IPR012655 Uncharacterised protein YrzI DB29_02734 a962a7c35104495f412047dfecba59cb 319 Gene3D G3DSA:1.10.10.60 21 81 2.2E-20 T 14-10-2018 DB29_02734 a962a7c35104495f412047dfecba59cb 319 Gene3D G3DSA:2.60.120.260 137 300 1.2E-18 T 14-10-2018 IPR008979 Galactose-binding-like domain superfamily DB29_02734 a962a7c35104495f412047dfecba59cb 319 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 81 123 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 DB29_02734 a962a7c35104495f412047dfecba59cb 319 SUPERFAMILY SSF46689 80 133 1.51E-14 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DB29_02734 a962a7c35104495f412047dfecba59cb 319 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 96 111 2.9E-7 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DB29_02734 a962a7c35104495f412047dfecba59cb 319 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 111 127 2.9E-7 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DB29_02734 a962a7c35104495f412047dfecba59cb 319 SMART SM00342 44 127 3.4E-35 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DB29_02734 a962a7c35104495f412047dfecba59cb 319 Gene3D G3DSA:1.10.10.60 82 136 1.4E-16 T 14-10-2018 DB29_02734 a962a7c35104495f412047dfecba59cb 319 Pfam PF12833 Helix-turn-helix domain 50 129 6.9E-25 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DB29_02734 a962a7c35104495f412047dfecba59cb 319 SUPERFAMILY SSF46689 29 78 7.32E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DB29_01672 8786ff9d266374e73b11782a2f17a55a 273 Pfam PF01261 Xylose isomerase-like TIM barrel 29 225 1.0E-28 T 14-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain DB29_01672 8786ff9d266374e73b11782a2f17a55a 273 Gene3D G3DSA:3.20.20.150 6 272 7.1E-66 T 14-10-2018 DB29_01672 8786ff9d266374e73b11782a2f17a55a 273 SUPERFAMILY SSF51658 8 271 9.43E-56 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily DB29_02706 68923c31dc9f74fda7a72a7c9a01c726 235 Pfam PF00459 Inositol monophosphatase family 93 222 8.6E-14 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 DB29_02706 68923c31dc9f74fda7a72a7c9a01c726 235 PRINTS PR00377 Inositol monophosphatase superfamily signature 125 148 9.6E-6 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 DB29_02706 68923c31dc9f74fda7a72a7c9a01c726 235 PRINTS PR00377 Inositol monophosphatase superfamily signature 195 219 9.6E-6 T 14-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 DB29_02706 68923c31dc9f74fda7a72a7c9a01c726 235 SUPERFAMILY SSF56655 92 231 1.57E-24 T 14-10-2018 DB29_02706 68923c31dc9f74fda7a72a7c9a01c726 235 Gene3D G3DSA:3.30.540.10 83 135 4.1E-8 T 14-10-2018 DB29_02706 68923c31dc9f74fda7a72a7c9a01c726 235 Gene3D G3DSA:3.40.190.80 142 234 1.9E-12 T 14-10-2018 DB29_04218 797265bf845d84fcb826a9a4f1f63b34 298 Gene3D G3DSA:3.40.50.450 3 296 5.7E-78 T 14-10-2018 DB29_04218 797265bf845d84fcb826a9a4f1f63b34 298 Pfam PF02481 DNA recombination-mediator protein A 77 282 4.7E-69 T 14-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 DB29_04218 797265bf845d84fcb826a9a4f1f63b34 298 SUPERFAMILY SSF102405 89 293 1.35E-25 T 14-10-2018 DB29_04218 797265bf845d84fcb826a9a4f1f63b34 298 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 74 295 6.2E-64 T 14-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 DB29_02312 6140dbf6312c2674b230837ea8cac38e 168 Pfam PF05066 HB1, ASXL, restriction endonuclease HTH domain 14 81 2.0E-15 T 14-10-2018 IPR007759 HB1/Asxl, restriction endonuclease HTH domain GO:0006351|GO:0006355 DB29_02312 6140dbf6312c2674b230837ea8cac38e 168 Hamap MF_00357 Probable DNA-directed RNA polymerase subunit delta [rpoE]. 9 158 13.823 T 14-10-2018 IPR029757 DNA-directed RNA polymerase subunit delta GO:0006351|GO:0006355 DB29_02312 6140dbf6312c2674b230837ea8cac38e 168 Gene3D G3DSA:1.10.10.1250 2 82 1.0E-31 T 14-10-2018 IPR038087 DNA-directed RNA polymerase subunit delta domain superfamily DB29_02312 6140dbf6312c2674b230837ea8cac38e 168 TIGRFAM TIGR04567 RNAP_delt_lowGC: DNA-directed RNA polymerase delta subunit 12 93 7.0E-34 T 14-10-2018 IPR029757 DNA-directed RNA polymerase subunit delta GO:0006351|GO:0006355 DB29_02752 cef3b8c1c36279777b99962f7e23d9db 142 SMART SM00422 1 69 4.8E-17 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DB29_02752 cef3b8c1c36279777b99962f7e23d9db 142 Pfam PF13411 MerR HTH family regulatory protein 1 66 7.6E-19 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DB29_02752 cef3b8c1c36279777b99962f7e23d9db 142 SUPERFAMILY SSF46955 1 120 1.03E-24 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily DB29_02752 cef3b8c1c36279777b99962f7e23d9db 142 Gene3D G3DSA:1.10.1660.10 1 125 3.8E-26 T 14-10-2018 DB29_01812 684503354ff3cac13581e487d80d69d3 215 ProSitePatterns PS01081 TetR-type HTH domain signature. 26 57 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site DB29_01812 684503354ff3cac13581e487d80d69d3 215 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 60 4.3E-19 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DB29_01812 684503354ff3cac13581e487d80d69d3 215 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 14 27 1.3E-13 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DB29_01812 684503354ff3cac13581e487d80d69d3 215 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 35 58 1.3E-13 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DB29_01812 684503354ff3cac13581e487d80d69d3 215 SUPERFAMILY SSF46689 3 78 1.41E-20 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DB29_01812 684503354ff3cac13581e487d80d69d3 215 Gene3D G3DSA:1.10.357.10 2 203 2.3E-52 T 14-10-2018 DB29_02360 cb1a39246f34fb625badb30e6626b587 265 Pfam PF00460 Flagella basal body rod protein 5 35 4.7E-10 T 14-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 DB29_02360 cb1a39246f34fb625badb30e6626b587 265 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 185 259 4.0E-15 T 14-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain DB29_02360 cb1a39246f34fb625badb30e6626b587 265 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 144 1.1E-29 T 14-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G DB29_02360 cb1a39246f34fb625badb30e6626b587 265 SUPERFAMILY SSF117143 108 222 4.97E-14 T 14-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like DB29_00328 e1c9480633720ab31021e57a75e1c120 723 SUPERFAMILY SSF109604 509 655 5.65E-13 T 14-10-2018 DB29_00328 e1c9480633720ab31021e57a75e1c120 723 SMART SM00471 506 662 1.1E-7 T 14-10-2018 IPR003607 HD/PDEase domain DB29_00328 e1c9480633720ab31021e57a75e1c120 723 TIGRFAM TIGR00277 HDIG: HDIG domain 507 605 2.1E-24 T 14-10-2018 IPR006675 HDIG domain DB29_00328 e1c9480633720ab31021e57a75e1c120 723 Gene3D G3DSA:1.10.3210.10 497 696 2.6E-21 T 14-10-2018 DB29_00328 e1c9480633720ab31021e57a75e1c120 723 Pfam PF07698 7TM receptor with intracellular HD hydrolase 285 485 3.1E-43 T 14-10-2018 IPR011621 Metal-dependent phosphohydrolase, 7TM intracellular domain DB29_00328 e1c9480633720ab31021e57a75e1c120 723 Pfam PF01966 HD domain 510 652 7.1E-17 T 14-10-2018 IPR006674 HD domain DB29_00328 e1c9480633720ab31021e57a75e1c120 723 Pfam PF07697 7TM-HD extracellular 55 278 6.6E-36 T 14-10-2018 IPR011624 Metal-dependent phosphohydrolase, 7TM extracellular domain DB29_01347 a461bd2c283714b4f995139262542ed7 368 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 53 278 1.7E-13 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 DB29_01347 a461bd2c283714b4f995139262542ed7 368 Gene3D G3DSA:3.40.640.10 5 250 1.9E-62 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DB29_01347 a461bd2c283714b4f995139262542ed7 368 Gene3D G3DSA:3.90.1150.130 251 364 1.5E-41 T 14-10-2018 DB29_01347 a461bd2c283714b4f995139262542ed7 368 SUPERFAMILY SSF53383 39 348 6.37E-36 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DB29_02267 ef767951d01c76ac7db7ef043036c872 239 SUPERFAMILY SSF53098 45 218 2.24E-39 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily DB29_02267 ef767951d01c76ac7db7ef043036c872 239 SMART SM00479 54 222 3.7E-24 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III DB29_02267 ef767951d01c76ac7db7ef043036c872 239 Gene3D G3DSA:3.30.420.10 51 221 9.1E-38 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 DB29_02267 ef767951d01c76ac7db7ef043036c872 239 Pfam PF00929 Exonuclease 56 212 4.0E-23 T 14-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III DB29_03099 a721af03e4137ee95e0973747817fb03 263 Pfam PF00194 Eukaryotic-type carbonic anhydrase 39 258 3.9E-47 T 14-10-2018 IPR001148 Alpha carbonic anhydrase domain DB29_03099 a721af03e4137ee95e0973747817fb03 263 SUPERFAMILY SSF51069 39 258 6.8E-72 T 14-10-2018 IPR036398 Alpha carbonic anhydrase domain superfamily DB29_03099 a721af03e4137ee95e0973747817fb03 263 ProSitePatterns PS00162 Alpha-carbonic anhydrases signature. 132 148 - T 14-10-2018 IPR018338 Carbonic anhydrase, alpha-class, conserved site GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117|Reactome: R-HSA-1475029 DB29_03099 a721af03e4137ee95e0973747817fb03 263 Gene3D G3DSA:3.10.200.10 37 262 7.0E-75 T 14-10-2018 IPR036398 Alpha carbonic anhydrase domain superfamily DB29_03099 a721af03e4137ee95e0973747817fb03 263 SMART SM01057 40 260 3.4E-91 T 14-10-2018 IPR001148 Alpha carbonic anhydrase domain DB29_03836 058fa008aae341daefa62db2fc239346 298 Pfam PF03547 Membrane transport protein 6 138 1.4E-7 T 14-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 DB29_03836 058fa008aae341daefa62db2fc239346 298 Pfam PF03547 Membrane transport protein 156 293 2.8E-14 T 14-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 DB29_03733 b02d415091eb6508b8e3bbde7d8dc97a 209 Pfam PF05389 Negative regulator of genetic competence (MecA) 1 204 5.1E-51 T 14-10-2018 IPR008681 Negative regulator of genetic competence, MecA DB29_03733 b02d415091eb6508b8e3bbde7d8dc97a 209 Gene3D G3DSA:3.30.70.1950 110 209 5.0E-28 T 14-10-2018 IPR038471 MecA, C-terminal domain superfamily DB29_03733 b02d415091eb6508b8e3bbde7d8dc97a 209 Hamap MF_01124 Adapter protein MecA [mecA]. 1 208 25.73 T 14-10-2018 IPR008681 Negative regulator of genetic competence, MecA DB29_03733 b02d415091eb6508b8e3bbde7d8dc97a 209 PIRSF PIRSF029008 1 209 1.7E-67 T 14-10-2018 IPR008681 Negative regulator of genetic competence, MecA DB29_03580 c6b5050a081d4931d1c354e594e5b001 195 Gene3D G3DSA:1.10.357.10 51 195 3.1E-36 T 14-10-2018 DB29_03580 c6b5050a081d4931d1c354e594e5b001 195 SUPERFAMILY SSF48498 81 193 1.28E-26 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily DB29_03580 c6b5050a081d4931d1c354e594e5b001 195 Gene3D G3DSA:1.10.10.60 2 50 1.2E-22 T 14-10-2018 DB29_03580 c6b5050a081d4931d1c354e594e5b001 195 SUPERFAMILY SSF46689 4 80 1.21E-17 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DB29_03580 c6b5050a081d4931d1c354e594e5b001 195 Pfam PF08359 YsiA-like protein, C-terminal region 59 191 1.1E-59 T 14-10-2018 IPR013570 Transcription regulator YsiA, C-terminal DB29_03580 c6b5050a081d4931d1c354e594e5b001 195 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 7.1E-11 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DB29_03580 c6b5050a081d4931d1c354e594e5b001 195 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 7.1E-11 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DB29_03580 c6b5050a081d4931d1c354e594e5b001 195 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 56 1.3E-17 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DB29_02030 88a573ff4fe3de6146ee6aeb05814558 212 Gene3D G3DSA:1.10.3720.10 3 212 1.3E-55 T 14-10-2018 IPR035906 MetI-like superfamily DB29_02030 88a573ff4fe3de6146ee6aeb05814558 212 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 6 104 8.6E-28 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 DB29_02030 88a573ff4fe3de6146ee6aeb05814558 212 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 27 210 2.9E-22 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DB29_02030 88a573ff4fe3de6146ee6aeb05814558 212 SUPERFAMILY SSF161098 7 210 6.02E-46 T 14-10-2018 IPR035906 MetI-like superfamily DB29_04010 c185a9b74cc94d80d7533b2d587ed367 256 Pfam PF02108 Flagellar assembly protein FliH 114 239 5.7E-10 T 14-10-2018 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE DB29_04010 c185a9b74cc94d80d7533b2d587ed367 256 TIGRFAM TIGR03825 FliH_bacil: flagellar assembly protein FliH 1 254 5.9E-103 T 14-10-2018 IPR022524 Flagellar assembly FliH, Bacilli DB29_02472 44c76b8eb7e40a53956f8e193e6af1ab 112 SUPERFAMILY SSF49472 1 112 9.16E-43 T 14-10-2018 IPR036817 Transthyretin/hydroxyisourate hydrolase domain superfamily Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 DB29_02472 44c76b8eb7e40a53956f8e193e6af1ab 112 Pfam PF00576 HIUase/Transthyretin family 4 111 7.6E-36 T 14-10-2018 IPR023416 Transthyretin/hydroxyisourate hydrolase domain Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 DB29_02472 44c76b8eb7e40a53956f8e193e6af1ab 112 ProSitePatterns PS00768 Transthyretin signature 1. 7 22 - T 14-10-2018 IPR023418 Transthyretin, thyroxine binding site Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 DB29_02472 44c76b8eb7e40a53956f8e193e6af1ab 112 PRINTS PR00189 Transthyretin signature 35 60 3.8E-8 T 14-10-2018 IPR000895 Transthyretin/hydroxyisourate hydrolase Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 DB29_02472 44c76b8eb7e40a53956f8e193e6af1ab 112 PRINTS PR00189 Transthyretin signature 3 23 3.8E-8 T 14-10-2018 IPR000895 Transthyretin/hydroxyisourate hydrolase Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 DB29_02472 44c76b8eb7e40a53956f8e193e6af1ab 112 PRINTS PR00189 Transthyretin signature 90 112 3.8E-8 T 14-10-2018 IPR000895 Transthyretin/hydroxyisourate hydrolase Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 DB29_02472 44c76b8eb7e40a53956f8e193e6af1ab 112 TIGRFAM TIGR02962 hdxy_isourate: hydroxyisourate hydrolase 2 112 1.4E-42 T 14-10-2018 IPR014306 Hydroxyisourate hydrolase GO:0006144|GO:0033971 KEGG: 00230+3.5.2.17|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 DB29_02472 44c76b8eb7e40a53956f8e193e6af1ab 112 ProSitePatterns PS00769 Transthyretin signature 2. 95 107 - T 14-10-2018 IPR023419 Transthyretin, conserved site Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 DB29_02472 44c76b8eb7e40a53956f8e193e6af1ab 112 Gene3D G3DSA:2.60.40.180 1 112 1.6E-38 T 14-10-2018 IPR036817 Transthyretin/hydroxyisourate hydrolase domain superfamily Reactome: R-HSA-2453864|Reactome: R-HSA-2453902|Reactome: R-HSA-3000171|Reactome: R-HSA-6798695|Reactome: R-HSA-975634|Reactome: R-HSA-977225 DB29_00239 eaf1be2c616c2dd54f41e333e4c5c319 591 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 375 385 - T 14-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site DB29_00239 eaf1be2c616c2dd54f41e333e4c5c319 591 SUPERFAMILY SSF52743 315 586 7.07E-96 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 DB29_00239 eaf1be2c616c2dd54f41e333e4c5c319 591 PRINTS PR00723 Subtilisin serine protease family (S8) signature 333 352 2.1E-21 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related DB29_00239 eaf1be2c616c2dd54f41e333e4c5c319 591 PRINTS PR00723 Subtilisin serine protease family (S8) signature 371 384 2.1E-21 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related DB29_00239 eaf1be2c616c2dd54f41e333e4c5c319 591 PRINTS PR00723 Subtilisin serine protease family (S8) signature 526 542 2.1E-21 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related DB29_00239 eaf1be2c616c2dd54f41e333e4c5c319 591 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 338 349 - T 14-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site DB29_00239 eaf1be2c616c2dd54f41e333e4c5c319 591 Pfam PF00082 Subtilase family 333 572 2.7E-55 T 14-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 DB29_00239 eaf1be2c616c2dd54f41e333e4c5c319 591 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 527 537 - T 14-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site DB29_00239 eaf1be2c616c2dd54f41e333e4c5c319 591 Gene3D G3DSA:3.40.50.200 276 589 1.5E-99 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 DB29_02806 2fd46362e98c2bec52186317656f211f 280 Gene3D G3DSA:3.30.750.24 160 278 6.0E-35 T 14-10-2018 IPR036513 STAS domain superfamily DB29_02806 2fd46362e98c2bec52186317656f211f 280 Pfam PF01740 STAS domain 169 269 5.2E-12 T 14-10-2018 IPR002645 STAS domain DB29_02806 2fd46362e98c2bec52186317656f211f 280 SUPERFAMILY SSF52091 163 273 4.32E-19 T 14-10-2018 IPR036513 STAS domain superfamily DB29_03809 d327940156cf28f141f4663edc3d536e 565 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 558 1.7E-180 T 14-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 DB29_03809 d327940156cf28f141f4663edc3d536e 565 SUPERFAMILY SSF52540 3 516 1.27E-31 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_03809 d327940156cf28f141f4663edc3d536e 565 Gene3D G3DSA:3.40.50.300 1 273 9.5E-51 T 14-10-2018 DB29_03809 d327940156cf28f141f4663edc3d536e 565 Gene3D G3DSA:3.40.50.300 274 559 2.0E-55 T 14-10-2018 DB29_03809 d327940156cf28f141f4663edc3d536e 565 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 514 6.4E-15 T 14-10-2018 IPR003395 RecF/RecN/SMC, N-terminal DB29_03809 d327940156cf28f141f4663edc3d536e 565 PIRSF PIRSF003128 1 563 2.0E-177 T 14-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 DB29_03809 d327940156cf28f141f4663edc3d536e 565 SUPERFAMILY SSF52540 1 220 5.22E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_03681 939626caac70d04f4d6a082a26de0979 280 SUPERFAMILY SSF55909 5 279 7.5E-75 T 14-10-2018 DB29_03681 939626caac70d04f4d6a082a26de0979 280 Gene3D G3DSA:3.75.10.10 1 280 8.7E-75 T 14-10-2018 DB29_03681 939626caac70d04f4d6a082a26de0979 280 Pfam PF02274 Amidinotransferase 20 278 4.3E-46 T 14-10-2018 DB29_00452 5f722930d1f1e2257479f06020b070eb 100 Pfam PF06305 Lipopolysaccharide assembly protein A domain 24 78 4.0E-14 T 14-10-2018 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 DB29_00569 c8c4592bd7f58af02c220fd51adb2bc6 153 SUPERFAMILY SSF47240 4 144 1.87E-48 T 14-10-2018 IPR009078 Ferritin-like superfamily DB29_00569 c8c4592bd7f58af02c220fd51adb2bc6 153 PIRSF PIRSF005900 1 150 2.7E-51 T 14-10-2018 IPR002177 DNA-binding protein Dps DB29_00569 c8c4592bd7f58af02c220fd51adb2bc6 153 Pfam PF00210 Ferritin-like domain 8 147 4.8E-36 T 14-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 DB29_00569 c8c4592bd7f58af02c220fd51adb2bc6 153 ProSitePatterns PS00818 Dps protein family signature 1. 28 44 - T 14-10-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 DB29_00569 c8c4592bd7f58af02c220fd51adb2bc6 153 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 123 141 1.9E-15 T 14-10-2018 IPR002177 DNA-binding protein Dps DB29_00569 c8c4592bd7f58af02c220fd51adb2bc6 153 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 52 68 1.9E-15 T 14-10-2018 IPR002177 DNA-binding protein Dps DB29_00569 c8c4592bd7f58af02c220fd51adb2bc6 153 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 28 44 1.9E-15 T 14-10-2018 IPR002177 DNA-binding protein Dps DB29_00569 c8c4592bd7f58af02c220fd51adb2bc6 153 Gene3D G3DSA:1.20.1260.10 1 152 4.7E-58 T 14-10-2018 IPR012347 Ferritin-like DB29_01900 98927280c15e9a1ebc31db4015131c57 95 Pfam PF00276 Ribosomal protein L23 6 88 1.5E-34 T 14-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 DB29_01900 98927280c15e9a1ebc31db4015131c57 95 Gene3D G3DSA:3.30.70.330 1 95 2.3E-34 T 14-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily DB29_01900 98927280c15e9a1ebc31db4015131c57 95 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 5 95 22.861 T 14-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 DB29_01900 98927280c15e9a1ebc31db4015131c57 95 SUPERFAMILY SSF54189 2 93 1.01E-33 T 14-10-2018 IPR012678 Ribosomal protein L23/L15e core domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 DB29_01462 c99c27db8750e797529508597cfaec0b 338 SMART SM00382 36 236 3.8E-17 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_01462 c99c27db8750e797529508597cfaec0b 338 SUPERFAMILY SSF52540 7 257 4.82E-72 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_01462 c99c27db8750e797529508597cfaec0b 338 Gene3D G3DSA:3.40.50.300 5 337 2.9E-105 T 14-10-2018 DB29_01462 c99c27db8750e797529508597cfaec0b 338 Pfam PF00005 ABC transporter 28 186 2.2E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB29_01462 c99c27db8750e797529508597cfaec0b 338 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 238 303 1.6E-15 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DB29_01462 c99c27db8750e797529508597cfaec0b 338 ProSitePatterns PS00211 ABC transporters family signature. 159 173 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB29_01462 c99c27db8750e797529508597cfaec0b 338 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 237 323 3.5E-25 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DB29_00022 e1efad068b6417d3d038a5989747c9eb 294 SUPERFAMILY SSF103481 37 138 6.41E-11 T 14-10-2018 DB29_00022 e1efad068b6417d3d038a5989747c9eb 294 Pfam PF00892 EamA-like transporter family 147 280 1.7E-20 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DB29_00022 e1efad068b6417d3d038a5989747c9eb 294 Pfam PF00892 EamA-like transporter family 4 135 7.1E-15 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DB29_00022 e1efad068b6417d3d038a5989747c9eb 294 SUPERFAMILY SSF103481 184 283 3.53E-12 T 14-10-2018 DB29_01153 0fdb43b112875cd3d2cf312d4be8e023 414 Pfam PF13242 HAD-hyrolase-like 181 253 1.1E-15 T 14-10-2018 DB29_01153 0fdb43b112875cd3d2cf312d4be8e023 414 TIGRFAM TIGR01460 HAD-SF-IIA: HAD hydrolase, family IIA 10 227 1.1E-43 T 14-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA DB29_01153 0fdb43b112875cd3d2cf312d4be8e023 414 Pfam PF13344 Haloacid dehalogenase-like hydrolase 10 108 9.3E-25 T 14-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA DB29_01153 0fdb43b112875cd3d2cf312d4be8e023 414 Gene3D G3DSA:3.40.50.1000 10 228 6.4E-71 T 14-10-2018 IPR023214 HAD superfamily DB29_01153 0fdb43b112875cd3d2cf312d4be8e023 414 SUPERFAMILY SSF56784 6 255 4.94E-57 T 14-10-2018 IPR036412 HAD-like superfamily DB29_01153 0fdb43b112875cd3d2cf312d4be8e023 414 Pfam PF00293 NUDIX domain 277 393 1.4E-19 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 DB29_01153 0fdb43b112875cd3d2cf312d4be8e023 414 Gene3D G3DSA:3.90.79.10 264 409 1.1E-33 T 14-10-2018 DB29_01153 0fdb43b112875cd3d2cf312d4be8e023 414 PRINTS PR00502 NUDIX hydrolase family signature 301 315 1.8E-8 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 DB29_01153 0fdb43b112875cd3d2cf312d4be8e023 414 PRINTS PR00502 NUDIX hydrolase family signature 315 330 1.8E-8 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 DB29_01153 0fdb43b112875cd3d2cf312d4be8e023 414 SUPERFAMILY SSF55811 256 406 5.15E-32 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 DB29_01153 0fdb43b112875cd3d2cf312d4be8e023 414 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 183 221 5.6E-6 T 14-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 DB29_01153 0fdb43b112875cd3d2cf312d4be8e023 414 Gene3D G3DSA:3.40.50.1000 87 182 6.4E-71 T 14-10-2018 IPR023214 HAD superfamily DB29_01153 0fdb43b112875cd3d2cf312d4be8e023 414 ProSitePatterns PS00893 Nudix box signature. 306 327 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 DB29_02877 e9770c37f98526dab4e1db20758f8586 434 TIGRFAM TIGR03860 FMN_nitrolo: FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family 7 426 3.4E-171 T 14-10-2018 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 DB29_02877 e9770c37f98526dab4e1db20758f8586 434 SUPERFAMILY SSF51679 1 430 1.44E-131 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 DB29_02877 e9770c37f98526dab4e1db20758f8586 434 Pfam PF00296 Luciferase-like monooxygenase 16 377 1.6E-60 T 14-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 DB29_02877 e9770c37f98526dab4e1db20758f8586 434 PIRSF PIRSF000337 1 434 1.4E-154 T 14-10-2018 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 DB29_02877 e9770c37f98526dab4e1db20758f8586 434 Gene3D G3DSA:3.20.20.30 1 434 7.5E-156 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 DB29_03626 048629396842a222da4a0567b6ee92c3 430 SUPERFAMILY SSF53383 3 425 7.58E-127 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DB29_03626 048629396842a222da4a0567b6ee92c3 430 Gene3D G3DSA:3.40.640.10 72 319 2.3E-178 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DB29_03626 048629396842a222da4a0567b6ee92c3 430 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 6 427 102.69 T 14-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 DB29_03626 048629396842a222da4a0567b6ee92c3 430 Gene3D G3DSA:3.90.1150.10 10 421 2.3E-178 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DB29_03626 048629396842a222da4a0567b6ee92c3 430 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 237 273 - T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DB29_03626 048629396842a222da4a0567b6ee92c3 430 Pfam PF00202 Aminotransferase class-III 35 368 1.8E-75 T 14-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 DB29_03626 048629396842a222da4a0567b6ee92c3 430 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 6 426 8.6E-193 T 14-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 DB29_03855 c423c4a2d39cdf65870bc4e7c1e80297 330 SUPERFAMILY SSF52540 5 255 1.45E-76 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_03855 c423c4a2d39cdf65870bc4e7c1e80297 330 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 234 321 3.4E-30 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DB29_03855 c423c4a2d39cdf65870bc4e7c1e80297 330 Gene3D G3DSA:3.40.50.300 3 328 2.8E-105 T 14-10-2018 DB29_03855 c423c4a2d39cdf65870bc4e7c1e80297 330 SMART SM00382 41 234 1.1E-18 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_03855 c423c4a2d39cdf65870bc4e7c1e80297 330 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB29_03855 c423c4a2d39cdf65870bc4e7c1e80297 330 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 236 301 9.4E-17 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DB29_03855 c423c4a2d39cdf65870bc4e7c1e80297 330 Pfam PF00005 ABC transporter 33 184 8.4E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB29_01824 b6ba988c35cf92805c34f148ce073931 274 PIRSF PIRSF004793 5 270 7.1E-94 T 14-10-2018 IPR014046 Diadenylate cyclase GO:0004016|GO:0006171 DB29_01824 b6ba988c35cf92805c34f148ce073931 274 Gene3D G3DSA:3.40.1700.10 105 258 1.4E-61 T 14-10-2018 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily DB29_01824 b6ba988c35cf92805c34f148ce073931 274 Hamap MF_01499 Diadenylate cyclase [dacA]. 17 257 34.25 T 14-10-2018 IPR034701 Diadenylate cyclase CdaA GO:0004016|GO:0006171 DB29_01824 b6ba988c35cf92805c34f148ce073931 274 Pfam PF02457 DisA bacterial checkpoint controller nucleotide-binding 121 238 5.6E-43 T 14-10-2018 IPR003390 DNA integrity scanning protein, DisA, N-terminal DB29_01824 b6ba988c35cf92805c34f148ce073931 274 SUPERFAMILY SSF143597 43 243 1.96E-69 T 14-10-2018 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily DB29_01824 b6ba988c35cf92805c34f148ce073931 274 TIGRFAM TIGR00159 TIGR00159: TIGR00159 family protein 6 258 2.3E-92 T 14-10-2018 IPR034701 Diadenylate cyclase CdaA GO:0004016|GO:0006171 DB29_00695 a3e3084afc20240b3302638d5881a445 56 Pfam PF13040 Fur-regulated basic protein B 2 40 1.2E-15 T 14-10-2018 IPR025004 Transcriptional regulatory protein SenN/SenS DB29_01659 7d8bd7225a1bc98efc20a39eeec2a639 430 Gene3D G3DSA:3.40.190.10 150 425 4.3E-123 T 14-10-2018 DB29_01659 7d8bd7225a1bc98efc20a39eeec2a639 430 Gene3D G3DSA:3.40.190.10 40 376 4.3E-123 T 14-10-2018 DB29_01659 7d8bd7225a1bc98efc20a39eeec2a639 430 Pfam PF13416 Bacterial extracellular solute-binding protein 57 350 3.7E-24 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein DB29_01659 7d8bd7225a1bc98efc20a39eeec2a639 430 SUPERFAMILY SSF53850 35 429 2.06E-58 T 14-10-2018 DB29_00900 1e0cb0d6c5762c00fb34c95be2c3d9be 476 Pfam PF02934 GatB/GatE catalytic domain 6 286 9.6E-112 T 14-10-2018 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic GO:0016874 DB29_00900 1e0cb0d6c5762c00fb34c95be2c3d9be 476 SUPERFAMILY SSF55931 4 294 1.63E-121 T 14-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 DB29_00900 1e0cb0d6c5762c00fb34c95be2c3d9be 476 Hamap MF_00121 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [gatB]. 2 474 39.54 T 14-10-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 DB29_00900 1e0cb0d6c5762c00fb34c95be2c3d9be 476 SUPERFAMILY SSF89095 295 401 8.29E-37 T 14-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 DB29_00900 1e0cb0d6c5762c00fb34c95be2c3d9be 476 Pfam PF02637 GatB domain 326 472 7.6E-60 T 14-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 DB29_00900 1e0cb0d6c5762c00fb34c95be2c3d9be 476 Gene3D G3DSA:1.10.10.410 413 476 3.8E-28 T 14-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal DB29_00900 1e0cb0d6c5762c00fb34c95be2c3d9be 476 ProSitePatterns PS01234 Glutamyl-tRNA(Gln) amidotransferase subunit B signature. 142 156 - T 14-10-2018 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site GO:0016884 DB29_00900 1e0cb0d6c5762c00fb34c95be2c3d9be 476 Gene3D G3DSA:1.10.150.380 298 411 2.9E-38 T 14-10-2018 DB29_00900 1e0cb0d6c5762c00fb34c95be2c3d9be 476 SMART SM00845 326 473 3.9E-84 T 14-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 DB29_00900 1e0cb0d6c5762c00fb34c95be2c3d9be 476 TIGRFAM TIGR00133 gatB: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit 1 473 4.5E-184 T 14-10-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 DB29_01551 8fa08a327c212364ff760c850d9a8d33 246 SUPERFAMILY SSF53697 6 206 3.84E-25 T 14-10-2018 DB29_01551 8fa08a327c212364ff760c850d9a8d33 246 Gene3D G3DSA:3.40.50.10490 3 243 2.6E-82 T 14-10-2018 DB29_01551 8fa08a327c212364ff760c850d9a8d33 246 Pfam PF13580 SIS domain 9 144 1.0E-47 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 DB29_02579 97625fbf92176d061d8d828d9c5901d7 307 Pfam PF00005 ABC transporter 21 161 7.9E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB29_02579 97625fbf92176d061d8d828d9c5901d7 307 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB29_02579 97625fbf92176d061d8d828d9c5901d7 307 Gene3D G3DSA:3.40.50.300 1 242 2.8E-59 T 14-10-2018 DB29_02579 97625fbf92176d061d8d828d9c5901d7 307 SUPERFAMILY SSF52540 4 228 1.11E-59 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_02579 97625fbf92176d061d8d828d9c5901d7 307 SMART SM00382 29 210 4.2E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_00167 8a35d83a9d544614b7c62e88cd9841f6 228 Gene3D G3DSA:3.30.240.20 169 227 1.2E-17 T 14-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily DB29_00167 8a35d83a9d544614b7c62e88cd9841f6 228 Gene3D G3DSA:3.30.240.20 79 155 2.3E-21 T 14-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily DB29_00167 8a35d83a9d544614b7c62e88cd9841f6 228 Pfam PF04239 Protein of unknown function (DUF421) 89 203 2.4E-31 T 14-10-2018 IPR007353 Protein of unknown function DUF421 DB29_03879 2bcda6cd95e8eaccd8afbc36f6b7d5fe 344 Gene3D G3DSA:1.10.287.90 24 115 2.1E-26 T 14-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DB29_03879 2bcda6cd95e8eaccd8afbc36f6b7d5fe 344 Gene3D G3DSA:2.60.40.2600 122 343 9.3E-74 T 14-10-2018 DB29_03879 2bcda6cd95e8eaccd8afbc36f6b7d5fe 344 Pfam PF02790 Cytochrome C oxidase subunit II, transmembrane domain 37 107 5.1E-9 T 14-10-2018 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DB29_03879 2bcda6cd95e8eaccd8afbc36f6b7d5fe 344 PRINTS PR01166 Cytochrome c oxidase subunit II signature 84 96 1.5E-5 T 14-10-2018 DB29_03879 2bcda6cd95e8eaccd8afbc36f6b7d5fe 344 PRINTS PR01166 Cytochrome c oxidase subunit II signature 188 205 1.5E-5 T 14-10-2018 DB29_03879 2bcda6cd95e8eaccd8afbc36f6b7d5fe 344 PRINTS PR01166 Cytochrome c oxidase subunit II signature 206 223 1.5E-5 T 14-10-2018 DB29_03879 2bcda6cd95e8eaccd8afbc36f6b7d5fe 344 SUPERFAMILY SSF46626 246 335 3.57E-12 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DB29_03879 2bcda6cd95e8eaccd8afbc36f6b7d5fe 344 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 150 221 2.0E-17 T 14-10-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DB29_03879 2bcda6cd95e8eaccd8afbc36f6b7d5fe 344 SUPERFAMILY SSF49503 123 285 1.29E-46 T 14-10-2018 IPR008972 Cupredoxin DB29_03879 2bcda6cd95e8eaccd8afbc36f6b7d5fe 344 TIGRFAM TIGR02866 CoxB: cytochrome c oxidase, subunit II 32 234 1.2E-79 T 14-10-2018 IPR014222 Cytochrome c oxidase, subunit II GO:0016021|GO:0016491 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DB29_03879 2bcda6cd95e8eaccd8afbc36f6b7d5fe 344 SUPERFAMILY SSF81464 30 111 1.8E-20 T 14-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DB29_03879 2bcda6cd95e8eaccd8afbc36f6b7d5fe 344 ProSitePatterns PS00078 CO II and nitrous oxide reductase dinuclear copper centers signature. 169 217 - T 14-10-2018 IPR001505 Copper centre Cu(A) GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DB29_03879 2bcda6cd95e8eaccd8afbc36f6b7d5fe 344 Pfam PF00034 Cytochrome c 248 335 3.4E-13 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DB29_04147 a738d961af4c6167bce9403bef84ad47 178 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 3 162 36.239 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 DB29_04147 a738d961af4c6167bce9403bef84ad47 178 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 4 155 1.6E-60 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 DB29_04147 a738d961af4c6167bce9403bef84ad47 178 SUPERFAMILY SSF55068 3 167 5.23E-70 T 14-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 DB29_04147 a738d961af4c6167bce9403bef84ad47 178 Pfam PF01625 Peptide methionine sulfoxide reductase 5 156 1.1E-60 T 14-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 DB29_04147 a738d961af4c6167bce9403bef84ad47 178 Gene3D G3DSA:3.30.1060.10 2 163 6.4E-64 T 14-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 DB29_00451 329a436e0970db94c651771008972fdd 785 Gene3D G3DSA:3.90.1640.30 57 318 1.3E-93 T 14-10-2018 DB29_00451 329a436e0970db94c651771008972fdd 785 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 30 562 1.1E-181 T 14-10-2018 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 DB29_00451 329a436e0970db94c651771008972fdd 785 Pfam PF01368 DHH family 83 209 1.8E-8 T 14-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 DB29_00451 329a436e0970db94c651771008972fdd 785 SUPERFAMILY SSF64182 57 451 4.97E-121 T 14-10-2018 IPR038763 DHH phosphoesterase superfamily DB29_00451 329a436e0970db94c651771008972fdd 785 Gene3D G3DSA:3.10.310.30 319 444 5.0E-34 T 14-10-2018 DB29_00451 329a436e0970db94c651771008972fdd 785 Pfam PF02272 DHHA1 domain 315 438 6.5E-19 T 14-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 DB29_00451 329a436e0970db94c651771008972fdd 785 Pfam PF10141 Single-strand DNA-specific exonuclease, C terminal domain 568 766 3.8E-61 T 14-10-2018 IPR018779 Single-stranded-DNA-specific exonuclease RecJ, C-terminal DB29_02578 4a372422f101fe020f7a3b206fb53389 238 SUPERFAMILY SSF46894 129 229 6.07E-26 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DB29_02578 4a372422f101fe020f7a3b206fb53389 238 SUPERFAMILY SSF52172 3 127 1.07E-37 T 14-10-2018 IPR011006 CheY-like superfamily DB29_02578 4a372422f101fe020f7a3b206fb53389 238 Pfam PF00486 Transcriptional regulatory protein, C terminal 153 228 4.5E-25 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DB29_02578 4a372422f101fe020f7a3b206fb53389 238 SMART SM00448 4 115 7.4E-40 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DB29_02578 4a372422f101fe020f7a3b206fb53389 238 Gene3D G3DSA:3.40.50.2300 1 130 1.7E-35 T 14-10-2018 DB29_02578 4a372422f101fe020f7a3b206fb53389 238 SMART SM00862 152 228 9.0E-24 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DB29_02578 4a372422f101fe020f7a3b206fb53389 238 Pfam PF00072 Response regulator receiver domain 6 115 4.1E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DB29_02578 4a372422f101fe020f7a3b206fb53389 238 Gene3D G3DSA:1.10.10.10 131 235 4.3E-29 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_01953 50f14316bd7fecfc751d22c4bcbbbbbf 142 Pfam PF00575 S1 RNA binding domain 4 74 1.7E-20 T 14-10-2018 IPR003029 S1 domain GO:0003676 DB29_01953 50f14316bd7fecfc751d22c4bcbbbbbf 142 SUPERFAMILY SSF50249 4 81 8.92E-24 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DB29_01953 50f14316bd7fecfc751d22c4bcbbbbbf 142 Gene3D G3DSA:2.40.50.140 1 84 2.9E-27 T 14-10-2018 DB29_01953 50f14316bd7fecfc751d22c4bcbbbbbf 142 SMART SM00316 4 74 1.1E-25 T 14-10-2018 IPR022967 RNA-binding domain, S1 DB29_00843 0b208b9c9460dcb05edf581287ac0e19 310 SUPERFAMILY SSF53474 53 287 3.52E-21 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DB29_00843 0b208b9c9460dcb05edf581287ac0e19 310 Gene3D G3DSA:3.40.50.1820 1 308 2.6E-54 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DB29_00843 0b208b9c9460dcb05edf581287ac0e19 310 Pfam PF09752 Abhydrolase domain containing 18 71 201 3.0E-4 T 14-10-2018 IPR019149 Abhydrolase domain containing 18 DB29_00907 00c4d64c62f2ad89b87111bdb06f4b50 353 Pfam PF02653 Branched-chain amino acid transport system / permease component 59 335 1.4E-39 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 DB29_03226 b12a5722886b40a18f25cfc8a57c138b 184 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 4 95 1.1E-28 T 14-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 DB29_03226 b12a5722886b40a18f25cfc8a57c138b 184 Gene3D G3DSA:3.30.160.100 1 98 1.1E-30 T 14-10-2018 IPR036567 Ribosome hibernation promotion factor-like DB29_03226 b12a5722886b40a18f25cfc8a57c138b 184 Hamap MF_00839 Ribosome hibernation promoting factor [hpf]. 1 183 24.956 T 14-10-2018 IPR034694 Ribosome hibernation promoting factor, long/plastid DB29_03226 b12a5722886b40a18f25cfc8a57c138b 184 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 101 2.6E-31 T 14-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 DB29_03226 b12a5722886b40a18f25cfc8a57c138b 184 Pfam PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus 124 179 1.2E-29 T 14-10-2018 IPR032528 Sigma 54 modulation/S30EA ribosomal protein, C-terminal DB29_03226 b12a5722886b40a18f25cfc8a57c138b 184 Gene3D G3DSA:3.30.505.50 137 183 1.1E-26 T 14-10-2018 IPR038416 Sigma 54 modulation/S30EA ribosomal protein, C-terminal domain superfamily DB29_03226 b12a5722886b40a18f25cfc8a57c138b 184 SUPERFAMILY SSF69754 3 112 1.83E-32 T 14-10-2018 IPR036567 Ribosome hibernation promotion factor-like DB29_02609 0b4bea2de55ceff0ccc18b030fa11281 257 Gene3D G3DSA:3.40.50.720 2 256 9.8E-83 T 14-10-2018 DB29_02609 0b4bea2de55ceff0ccc18b030fa11281 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 13 30 5.4E-43 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_02609 0b4bea2de55ceff0ccc18b030fa11281 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 135 151 5.4E-43 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_02609 0b4bea2de55ceff0ccc18b030fa11281 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 162 181 5.4E-43 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_02609 0b4bea2de55ceff0ccc18b030fa11281 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 183 200 5.4E-43 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_02609 0b4bea2de55ceff0ccc18b030fa11281 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 88 99 5.4E-43 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_02609 0b4bea2de55ceff0ccc18b030fa11281 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 218 238 5.4E-43 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_02609 0b4bea2de55ceff0ccc18b030fa11281 257 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 18 255 2.9E-68 T 14-10-2018 DB29_02609 0b4bea2de55ceff0ccc18b030fa11281 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 88 99 3.0E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_02609 0b4bea2de55ceff0ccc18b030fa11281 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 141 149 3.0E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_02609 0b4bea2de55ceff0ccc18b030fa11281 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 162 181 3.0E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_02609 0b4bea2de55ceff0ccc18b030fa11281 257 SUPERFAMILY SSF51735 12 256 3.36E-82 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_03383 b26441bc7cc03f4150afc0f9cc25f4df 156 Pfam PF02681 Divergent PAP2 family 5 145 1.2E-50 T 14-10-2018 IPR003832 Protein of unknown function DUF212 DB29_02571 04e3b17333c3f62ba99daeaa895d38bd 556 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 450 555 9.3E-7 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DB29_02571 04e3b17333c3f62ba99daeaa895d38bd 556 Gene3D G3DSA:3.30.565.10 414 556 7.8E-18 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB29_02571 04e3b17333c3f62ba99daeaa895d38bd 556 SUPERFAMILY SSF55874 410 554 2.1E-15 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB29_02571 04e3b17333c3f62ba99daeaa895d38bd 556 SMART SM00387 442 556 5.9E-4 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DB29_02571 04e3b17333c3f62ba99daeaa895d38bd 556 Pfam PF06580 Histidine kinase 354 431 1.6E-20 T 14-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 DB29_01283 5df632d00c0c7f66ddb752282a99808e 407 SUPERFAMILY SSF52172 8 140 2.85E-28 T 14-10-2018 IPR011006 CheY-like superfamily DB29_01283 5df632d00c0c7f66ddb752282a99808e 407 Gene3D G3DSA:3.40.50.2300 6 145 1.2E-28 T 14-10-2018 DB29_01283 5df632d00c0c7f66ddb752282a99808e 407 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 374 389 4.0E-7 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DB29_01283 5df632d00c0c7f66ddb752282a99808e 407 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 389 405 4.0E-7 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DB29_01283 5df632d00c0c7f66ddb752282a99808e 407 Gene3D G3DSA:1.10.10.60 303 354 7.4E-17 T 14-10-2018 DB29_01283 5df632d00c0c7f66ddb752282a99808e 407 Pfam PF12833 Helix-turn-helix domain 329 407 4.6E-23 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DB29_01283 5df632d00c0c7f66ddb752282a99808e 407 SMART SM00448 8 121 1.9E-25 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DB29_01283 5df632d00c0c7f66ddb752282a99808e 407 Gene3D G3DSA:1.10.10.60 355 407 1.1E-20 T 14-10-2018 DB29_01283 5df632d00c0c7f66ddb752282a99808e 407 SUPERFAMILY SSF46689 309 356 4.03E-6 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DB29_01283 5df632d00c0c7f66ddb752282a99808e 407 Pfam PF00072 Response regulator receiver domain 11 121 7.7E-23 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DB29_01283 5df632d00c0c7f66ddb752282a99808e 407 SMART SM00342 322 405 2.0E-34 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DB29_01283 5df632d00c0c7f66ddb752282a99808e 407 SUPERFAMILY SSF46689 358 406 1.16E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DB29_01895 d873f13a458bcc45fdfe6da3bfb7d693 145 SUPERFAMILY SSF54686 1 137 5.36E-60 T 14-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 DB29_01895 d873f13a458bcc45fdfe6da3bfb7d693 145 Pfam PF00252 Ribosomal protein L16p/L10e 4 132 1.2E-53 T 14-10-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 DB29_01895 d873f13a458bcc45fdfe6da3bfb7d693 145 PRINTS PR00060 Ribosomal protein L16 signature 58 87 1.4E-40 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB29_01895 d873f13a458bcc45fdfe6da3bfb7d693 145 PRINTS PR00060 Ribosomal protein L16 signature 88 117 1.4E-40 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB29_01895 d873f13a458bcc45fdfe6da3bfb7d693 145 PRINTS PR00060 Ribosomal protein L16 signature 24 36 1.4E-40 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB29_01895 d873f13a458bcc45fdfe6da3bfb7d693 145 PRINTS PR00060 Ribosomal protein L16 signature 42 53 1.4E-40 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB29_01895 d873f13a458bcc45fdfe6da3bfb7d693 145 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 59 70 - T 14-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 DB29_01895 d873f13a458bcc45fdfe6da3bfb7d693 145 Gene3D G3DSA:3.90.1170.10 1 144 2.4E-56 T 14-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 DB29_01895 d873f13a458bcc45fdfe6da3bfb7d693 145 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 127 6.4E-64 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB29_01895 d873f13a458bcc45fdfe6da3bfb7d693 145 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 82 93 - T 14-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 DB29_01895 d873f13a458bcc45fdfe6da3bfb7d693 145 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 134 41.544 T 14-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB29_03970 8f32d4ea39f41121a1055af9f413679b 191 Hamap MF_01814 Transcription factor FapR [fapR]. 1 185 35.309 T 14-10-2018 IPR017275 Transcription factor FapR GO:0003700|GO:0045717|GO:0045892 DB29_03970 8f32d4ea39f41121a1055af9f413679b 191 Gene3D G3DSA:3.10.129.10 67 185 2.8E-36 T 14-10-2018 DB29_03970 8f32d4ea39f41121a1055af9f413679b 191 SUPERFAMILY SSF54637 74 179 3.88E-25 T 14-10-2018 IPR029069 HotDog domain superfamily DB29_03970 8f32d4ea39f41121a1055af9f413679b 191 Gene3D G3DSA:1.10.10.10 1 60 1.3E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_03970 8f32d4ea39f41121a1055af9f413679b 191 PIRSF PIRSF037733 1 188 7.7E-83 T 14-10-2018 IPR017275 Transcription factor FapR GO:0003700|GO:0045717|GO:0045892 DB29_03970 8f32d4ea39f41121a1055af9f413679b 191 Pfam PF01575 MaoC like domain 103 168 6.9E-5 T 14-10-2018 IPR002539 MaoC-like dehydratase domain DB29_01990 3c6e40ae57594a038f6cb0170e97802b 217 Gene3D G3DSA:3.40.50.620 1 136 2.4E-8 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DB29_01990 3c6e40ae57594a038f6cb0170e97802b 217 SUPERFAMILY SSF52402 7 133 4.66E-12 T 14-10-2018 DB29_01990 3c6e40ae57594a038f6cb0170e97802b 217 Pfam PF00582 Universal stress protein family 6 132 3.4E-6 T 14-10-2018 IPR006016 UspA DB29_03477 2203a8800b067795da32e0ba50e73b25 336 Pfam PF13303 Phosphotransferase system, EIIC 19 332 1.9E-105 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 DB29_01540 08a250dea91a9dc0c896f7446d1df9d6 478 Pfam PF04055 Radical SAM superfamily 63 234 3.7E-11 T 14-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 DB29_01540 08a250dea91a9dc0c896f7446d1df9d6 478 SUPERFAMILY SSF102114 50 462 1.57E-65 T 14-10-2018 DB29_01540 08a250dea91a9dc0c896f7446d1df9d6 478 SMART SM00729 57 280 3.8E-32 T 14-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 DB29_01540 08a250dea91a9dc0c896f7446d1df9d6 478 Gene3D G3DSA:3.80.30.20 11 386 5.2E-66 T 14-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe DB29_01125 cca93f3e8d6b5036cadb93794f1f9e41 341 Gene3D G3DSA:3.40.50.300 1 237 2.2E-72 T 14-10-2018 DB29_01125 cca93f3e8d6b5036cadb93794f1f9e41 341 SMART SM00382 30 218 1.2E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_01125 cca93f3e8d6b5036cadb93794f1f9e41 341 SUPERFAMILY SSF52540 1 240 7.37E-81 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_01125 cca93f3e8d6b5036cadb93794f1f9e41 341 SUPERFAMILY SSF55021 249 335 1.6E-18 T 14-10-2018 DB29_01125 cca93f3e8d6b5036cadb93794f1f9e41 341 Pfam PF00005 ABC transporter 21 169 8.2E-35 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB29_01125 cca93f3e8d6b5036cadb93794f1f9e41 341 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB29_01125 cca93f3e8d6b5036cadb93794f1f9e41 341 Gene3D G3DSA:3.30.70.260 238 334 8.0E-25 T 14-10-2018 DB29_01125 cca93f3e8d6b5036cadb93794f1f9e41 341 Pfam PF09383 NIL domain 260 332 5.0E-17 T 14-10-2018 IPR018449 NIL domain DB29_01125 cca93f3e8d6b5036cadb93794f1f9e41 341 SMART SM00930 258 333 4.8E-24 T 14-10-2018 IPR018449 NIL domain DB29_02033 ac0c29ac08a05ef3aa81793206470ea1 481 SUPERFAMILY SSF53720 6 477 8.12E-147 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 DB29_02033 ac0c29ac08a05ef3aa81793206470ea1 481 Gene3D G3DSA:3.40.309.10 258 445 5.0E-153 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 DB29_02033 ac0c29ac08a05ef3aa81793206470ea1 481 Gene3D G3DSA:3.40.605.10 21 473 5.0E-153 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 DB29_02033 ac0c29ac08a05ef3aa81793206470ea1 481 Pfam PF00171 Aldehyde dehydrogenase family 16 473 1.9E-157 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 DB29_01516 c06cb5f91addfc817a8fd95a305d1994 315 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 251 264 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 DB29_01516 c06cb5f91addfc817a8fd95a305d1994 315 SUPERFAMILY SSF53613 1 306 3.74E-82 T 14-10-2018 IPR029056 Ribokinase-like DB29_01516 c06cb5f91addfc817a8fd95a305d1994 315 Gene3D G3DSA:3.40.1190.20 1 311 2.9E-90 T 14-10-2018 IPR029056 Ribokinase-like DB29_01516 c06cb5f91addfc817a8fd95a305d1994 315 Pfam PF00294 pfkB family carbohydrate kinase 2 299 8.6E-65 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB DB29_00117 8ce6a7ac621a4412176ac1b79521a29d 621 Pfam PF02219 Methylenetetrahydrofolate reductase 319 578 2.9E-27 T 14-10-2018 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 DB29_00117 8ce6a7ac621a4412176ac1b79521a29d 621 Gene3D G3DSA:3.20.20.330 1 294 6.4E-83 T 14-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 DB29_00117 8ce6a7ac621a4412176ac1b79521a29d 621 Pfam PF02574 Homocysteine S-methyltransferase 13 283 4.3E-52 T 14-10-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 DB29_00117 8ce6a7ac621a4412176ac1b79521a29d 621 Gene3D G3DSA:3.20.20.220 316 603 8.8E-54 T 14-10-2018 DB29_00117 8ce6a7ac621a4412176ac1b79521a29d 621 SUPERFAMILY SSF51730 317 603 1.63E-67 T 14-10-2018 IPR029041 FAD-linked oxidoreductase-like DB29_00117 8ce6a7ac621a4412176ac1b79521a29d 621 SUPERFAMILY SSF82282 2 364 8.89E-96 T 14-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 DB29_03204 f8995114cd02a5316882e7113f22c4b3 611 SUPERFAMILY SSF53850 72 589 1.45E-111 T 14-10-2018 DB29_03204 f8995114cd02a5316882e7113f22c4b3 611 Gene3D G3DSA:3.40.190.10 55 333 1.0E-54 T 14-10-2018 DB29_03204 f8995114cd02a5316882e7113f22c4b3 611 Gene3D G3DSA:3.10.105.10 334 569 7.4E-75 T 14-10-2018 DB29_03204 f8995114cd02a5316882e7113f22c4b3 611 PIRSF PIRSF002741 6 600 7.7E-86 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 DB29_03204 f8995114cd02a5316882e7113f22c4b3 611 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 126 518 2.0E-77 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain DB29_02859 a3aac3e2e10bd25f6974dbe55aef9944 379 Gene3D G3DSA:3.40.50.720 170 339 8.7E-124 T 14-10-2018 DB29_02859 a3aac3e2e10bd25f6974dbe55aef9944 379 SUPERFAMILY SSF51735 157 340 8.24E-45 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_02859 a3aac3e2e10bd25f6974dbe55aef9944 379 Pfam PF13823 Alcohol dehydrogenase GroES-associated 1 23 1.4E-8 T 14-10-2018 IPR027399 Alcohol dehydrogenase GroES-associated DB29_02859 a3aac3e2e10bd25f6974dbe55aef9944 379 Gene3D G3DSA:3.90.180.10 4 367 8.7E-124 T 14-10-2018 DB29_02859 a3aac3e2e10bd25f6974dbe55aef9944 379 Pfam PF00107 Zinc-binding dehydrogenase 190 262 2.9E-10 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 DB29_02859 a3aac3e2e10bd25f6974dbe55aef9944 379 SUPERFAMILY SSF50129 1 178 1.28E-59 T 14-10-2018 IPR011032 GroES-like superfamily DB29_02859 a3aac3e2e10bd25f6974dbe55aef9944 379 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 139 1.9E-28 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 DB29_02859 a3aac3e2e10bd25f6974dbe55aef9944 379 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 58 72 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 DB29_02458 21510110b77551990a22de1c6b183437 264 SUPERFAMILY SSF52540 9 233 1.88E-65 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_02458 21510110b77551990a22de1c6b183437 264 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB29_02458 21510110b77551990a22de1c6b183437 264 Pfam PF00005 ABC transporter 25 168 6.2E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB29_02458 21510110b77551990a22de1c6b183437 264 SMART SM00382 34 230 9.9E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_02458 21510110b77551990a22de1c6b183437 264 Gene3D G3DSA:3.40.50.300 2 227 1.4E-60 T 14-10-2018 DB29_00048 547a90224a205189635cc1f8a5ec69c7 478 SMART SM00382 286 463 1.9E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_00048 547a90224a205189635cc1f8a5ec69c7 478 SMART SM00382 33 210 9.6E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_00048 547a90224a205189635cc1f8a5ec69c7 478 SUPERFAMILY SSF52540 7 225 2.07E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_00048 547a90224a205189635cc1f8a5ec69c7 478 Gene3D G3DSA:3.40.50.300 263 474 2.6E-41 T 14-10-2018 DB29_00048 547a90224a205189635cc1f8a5ec69c7 478 SUPERFAMILY SSF52540 282 464 6.63E-39 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_00048 547a90224a205189635cc1f8a5ec69c7 478 Gene3D G3DSA:3.40.50.300 3 238 4.9E-56 T 14-10-2018 DB29_00048 547a90224a205189635cc1f8a5ec69c7 478 Pfam PF00005 ABC transporter 25 164 1.1E-20 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB29_00048 547a90224a205189635cc1f8a5ec69c7 478 Pfam PF00005 ABC transporter 284 414 1.4E-22 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB29_00048 547a90224a205189635cc1f8a5ec69c7 478 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB29_00654 3c9aee6027009f924fd170a29681c195 48 SUPERFAMILY SSF46785 1 45 3.16E-10 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_00654 3c9aee6027009f924fd170a29681c195 48 Gene3D G3DSA:1.10.10.10 1 48 5.2E-12 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_03345 83a915db3fbd6391ca223668547f859c 448 Pfam PF02872 5'-nucleotidase, C-terminal domain 281 409 9.2E-9 T 14-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DB29_03345 83a915db3fbd6391ca223668547f859c 448 Gene3D G3DSA:3.60.21.10 1 271 4.0E-52 T 14-10-2018 IPR029052 Metallo-dependent phosphatase-like DB29_03345 83a915db3fbd6391ca223668547f859c 448 Gene3D G3DSA:3.90.780.10 285 448 2.9E-12 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DB29_03345 83a915db3fbd6391ca223668547f859c 448 PRINTS PR01607 Apyrase family signature 211 231 4.9E-20 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DB29_03345 83a915db3fbd6391ca223668547f859c 448 PRINTS PR01607 Apyrase family signature 164 181 4.9E-20 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DB29_03345 83a915db3fbd6391ca223668547f859c 448 PRINTS PR01607 Apyrase family signature 3 21 4.9E-20 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DB29_03345 83a915db3fbd6391ca223668547f859c 448 PRINTS PR01607 Apyrase family signature 398 417 4.9E-20 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DB29_03345 83a915db3fbd6391ca223668547f859c 448 PRINTS PR01607 Apyrase family signature 183 206 4.9E-20 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DB29_03345 83a915db3fbd6391ca223668547f859c 448 PRINTS PR01607 Apyrase family signature 324 347 4.9E-20 T 14-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DB29_03345 83a915db3fbd6391ca223668547f859c 448 Pfam PF00149 Calcineurin-like phosphoesterase 6 200 6.6E-9 T 14-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 DB29_03345 83a915db3fbd6391ca223668547f859c 448 PIRSF PIRSF036361 1 448 1.3E-150 T 14-10-2018 IPR011240 Phosphoesterase-related protein YunD DB29_03345 83a915db3fbd6391ca223668547f859c 448 SUPERFAMILY SSF55816 276 447 2.22E-24 T 14-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 DB29_03345 83a915db3fbd6391ca223668547f859c 448 SUPERFAMILY SSF56300 3 271 1.23E-60 T 14-10-2018 DB29_02575 2d55729df9524c23f362123bbe5e9aa0 240 Gene3D G3DSA:3.40.50.880 1 239 1.1E-70 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like DB29_02575 2d55729df9524c23f362123bbe5e9aa0 240 SUPERFAMILY SSF52317 16 234 4.13E-33 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like DB29_02575 2d55729df9524c23f362123bbe5e9aa0 240 Pfam PF07722 Peptidase C26 4 215 1.2E-65 T 14-10-2018 IPR011697 Peptidase C26 GO:0016787 Reactome: R-HSA-6798695 DB29_02282 2e6c3a7d138313d729bc9fcb05f60334 249 Gene3D G3DSA:3.30.70.1030 1 138 3.7E-57 T 14-10-2018 DB29_02282 2e6c3a7d138313d729bc9fcb05f60334 249 Gene3D G3DSA:3.30.70.1100 139 249 6.8E-48 T 14-10-2018 DB29_02282 2e6c3a7d138313d729bc9fcb05f60334 249 Hamap MF_01442 Putative heme-dependent peroxidase . 1 249 57.405 T 14-10-2018 IPR031332 Putative heme-dependent peroxidase, UPF0447 family DB29_02282 2e6c3a7d138313d729bc9fcb05f60334 249 SUPERFAMILY SSF54909 1 248 9.12E-97 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel DB29_02282 2e6c3a7d138313d729bc9fcb05f60334 249 Pfam PF06778 Chlorite dismutase 33 237 1.3E-78 T 14-10-2018 IPR010644 Putative heme-dependent peroxidase/Chlorite dismutase DB29_03165 95a849ccf754d5832bfb9f9d95d0d74d 109 Gene3D G3DSA:1.10.260.40 4 98 2.9E-22 T 14-10-2018 DB29_03165 95a849ccf754d5832bfb9f9d95d0d74d 109 SMART SM00530 7 62 1.4E-16 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DB29_03165 95a849ccf754d5832bfb9f9d95d0d74d 109 Pfam PF01381 Helix-turn-helix 8 62 5.4E-15 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DB29_03165 95a849ccf754d5832bfb9f9d95d0d74d 109 SUPERFAMILY SSF47413 2 68 4.9E-18 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DB29_01399 5e9df430d58d9b377b31f461e64d832e 500 Gene3D G3DSA:3.50.50.60 6 486 3.8E-116 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB29_01399 5e9df430d58d9b377b31f461e64d832e 500 SUPERFAMILY SSF56425 280 427 4.88E-25 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 DB29_01399 5e9df430d58d9b377b31f461e64d832e 500 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 6.3E-5 T 14-10-2018 DB29_01399 5e9df430d58d9b377b31f461e64d832e 500 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 363 383 6.3E-5 T 14-10-2018 DB29_01399 5e9df430d58d9b377b31f461e64d832e 500 Pfam PF00890 FAD binding domain 7 470 1.7E-41 T 14-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 DB29_01399 5e9df430d58d9b377b31f461e64d832e 500 Gene3D G3DSA:3.90.700.10 261 428 3.8E-116 T 14-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 DB29_01399 5e9df430d58d9b377b31f461e64d832e 500 SUPERFAMILY SSF51905 2 495 1.2E-42 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB29_04009 9c1af1d8f3ad786aa886412dc7aef215 335 SUPERFAMILY SSF48029 6 100 7.59E-21 T 14-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical DB29_04009 9c1af1d8f3ad786aa886412dc7aef215 335 Gene3D G3DSA:1.10.220.30 196 335 1.7E-49 T 14-10-2018 DB29_04009 9c1af1d8f3ad786aa886412dc7aef215 335 SUPERFAMILY SSF48029 115 326 1.83E-68 T 14-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical DB29_04009 9c1af1d8f3ad786aa886412dc7aef215 335 Pfam PF14842 FliG N-terminal domain 5 108 2.2E-35 T 14-10-2018 IPR028263 Flagellar motor switch protein FliG, N-terminal domain DB29_04009 9c1af1d8f3ad786aa886412dc7aef215 335 Pfam PF14841 FliG middle domain 117 190 1.3E-28 T 14-10-2018 IPR032779 Flagellar motor switch protein FliG, middle domain DB29_04009 9c1af1d8f3ad786aa886412dc7aef215 335 Gene3D G3DSA:1.10.220.30 2 86 4.0E-22 T 14-10-2018 DB29_04009 9c1af1d8f3ad786aa886412dc7aef215 335 Gene3D G3DSA:1.10.220.30 104 195 5.8E-33 T 14-10-2018 DB29_04009 9c1af1d8f3ad786aa886412dc7aef215 335 PRINTS PR00954 Flagellar motor switch protein FliG signature 35 61 1.8E-73 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 DB29_04009 9c1af1d8f3ad786aa886412dc7aef215 335 PRINTS PR00954 Flagellar motor switch protein FliG signature 273 299 1.8E-73 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 DB29_04009 9c1af1d8f3ad786aa886412dc7aef215 335 PRINTS PR00954 Flagellar motor switch protein FliG signature 6 22 1.8E-73 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 DB29_04009 9c1af1d8f3ad786aa886412dc7aef215 335 PRINTS PR00954 Flagellar motor switch protein FliG signature 227 247 1.8E-73 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 DB29_04009 9c1af1d8f3ad786aa886412dc7aef215 335 PRINTS PR00954 Flagellar motor switch protein FliG signature 196 221 1.8E-73 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 DB29_04009 9c1af1d8f3ad786aa886412dc7aef215 335 PRINTS PR00954 Flagellar motor switch protein FliG signature 249 269 1.8E-73 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 DB29_04009 9c1af1d8f3ad786aa886412dc7aef215 335 PRINTS PR00954 Flagellar motor switch protein FliG signature 115 138 1.8E-73 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 DB29_04009 9c1af1d8f3ad786aa886412dc7aef215 335 Pfam PF01706 FliG C-terminal domain 220 325 5.3E-42 T 14-10-2018 IPR023087 Flagellar motor switch protein FliG, C-terminal DB29_04009 9c1af1d8f3ad786aa886412dc7aef215 335 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 4 335 2.2E-137 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 DB29_04009 9c1af1d8f3ad786aa886412dc7aef215 335 PIRSF PIRSF003161 1 335 1.4E-120 T 14-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 DB29_03422 bede4031bc1913a84b278180fa0f8c04 404 SUPERFAMILY SSF103473 8 400 9.29E-63 T 14-10-2018 IPR036259 MFS transporter superfamily DB29_03422 bede4031bc1913a84b278180fa0f8c04 404 PRINTS PR01035 Tetracycline resistance protein signature 168 188 2.5E-6 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 DB29_03422 bede4031bc1913a84b278180fa0f8c04 404 PRINTS PR01035 Tetracycline resistance protein signature 340 363 2.5E-6 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 DB29_03422 bede4031bc1913a84b278180fa0f8c04 404 PRINTS PR01035 Tetracycline resistance protein signature 140 162 2.5E-6 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 DB29_03422 bede4031bc1913a84b278180fa0f8c04 404 PRINTS PR01035 Tetracycline resistance protein signature 19 35 2.5E-6 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 DB29_03422 bede4031bc1913a84b278180fa0f8c04 404 PRINTS PR01035 Tetracycline resistance protein signature 81 105 2.5E-6 T 14-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 DB29_03422 bede4031bc1913a84b278180fa0f8c04 404 Pfam PF07690 Major Facilitator Superfamily 18 360 3.1E-50 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DB29_03422 bede4031bc1913a84b278180fa0f8c04 404 Gene3D G3DSA:1.20.1250.20 3 400 1.5E-61 T 14-10-2018 DB29_03422 bede4031bc1913a84b278180fa0f8c04 404 ProSitePatterns PS00216 Sugar transport proteins signature 1. 63 79 - T 14-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 DB29_03351 b8696d0fd84121e63773c1a1fa091bf7 339 SUPERFAMILY SSF51261 132 324 3.61E-35 T 14-10-2018 IPR011055 Duplicated hybrid motif DB29_03351 b8696d0fd84121e63773c1a1fa091bf7 339 Gene3D G3DSA:2.70.70.10 121 336 4.6E-57 T 14-10-2018 IPR011055 Duplicated hybrid motif DB29_03351 b8696d0fd84121e63773c1a1fa091bf7 339 Pfam PF01551 Peptidase family M23 213 310 1.4E-19 T 14-10-2018 IPR016047 Peptidase M23 DB29_01156 d55127f8d839090ca5517f4cc7e81dc6 238 Pfam PF03591 AzlC protein 20 159 2.4E-38 T 14-10-2018 IPR011606 Branched-chain amino acid transport, permease DB29_01156 d55127f8d839090ca5517f4cc7e81dc6 238 TIGRFAM TIGR00346 azlC: azaleucine resistance protein AzlC 10 229 8.4E-105 T 14-10-2018 IPR004471 Branched-chain amino acid transport, AzlC GO:0016021 DB29_01033 968e2d2e1ad9f933d7cb248bd88e14cd 63 Pfam PF14151 YfhD-like protein 1 58 2.3E-25 T 14-10-2018 IPR025435 YfhD-like protein DB29_01033 968e2d2e1ad9f933d7cb248bd88e14cd 63 ProDom PD053407 YFHD 1 38 2.0E-15 T 14-10-2018 DB29_03370 04d6438cef94f3c909cf0319eeac0a5b 41 SUPERFAMILY SSF140500 1 32 4.84E-5 T 14-10-2018 IPR037208 Aspartyl-phosphate phosphatase Spo0E-like superfamily GO:0043937 DB29_03370 04d6438cef94f3c909cf0319eeac0a5b 41 Gene3D G3DSA:1.20.58.990 1 40 1.2E-5 T 14-10-2018 IPR037208 Aspartyl-phosphate phosphatase Spo0E-like superfamily GO:0043937 DB29_01776 14b57e2f9aea328869e516034b46a26d 164 Gene3D G3DSA:1.20.1260.10 1 164 1.1E-49 T 14-10-2018 IPR012347 Ferritin-like DB29_01776 14b57e2f9aea328869e516034b46a26d 164 SUPERFAMILY SSF47240 1 160 2.14E-55 T 14-10-2018 IPR009078 Ferritin-like superfamily DB29_01776 14b57e2f9aea328869e516034b46a26d 164 Pfam PF00210 Ferritin-like domain 8 144 4.1E-40 T 14-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 DB29_03159 af06e028c9107ce4150fefa030c897e5 229 Gene3D G3DSA:3.40.50.300 1 227 5.3E-45 T 14-10-2018 DB29_03159 af06e028c9107ce4150fefa030c897e5 229 SUPERFAMILY SSF52540 2 212 3.59E-44 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_03159 af06e028c9107ce4150fefa030c897e5 229 Pfam PF00005 ABC transporter 17 152 1.6E-16 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB29_03159 af06e028c9107ce4150fefa030c897e5 229 SMART SM00382 26 201 2.8E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_00884 e95f08db87ebf4d7233a96e4a578abd8 258 SUPERFAMILY SSF55781 77 250 1.24E-36 T 14-10-2018 DB29_00884 e95f08db87ebf4d7233a96e4a578abd8 258 Gene3D G3DSA:1.10.10.10 2 77 3.3E-15 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_00884 e95f08db87ebf4d7233a96e4a578abd8 258 SUPERFAMILY SSF46785 7 79 5.47E-12 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_00884 e95f08db87ebf4d7233a96e4a578abd8 258 Gene3D G3DSA:3.30.450.40 81 253 7.6E-41 T 14-10-2018 IPR029016 GAF-like domain superfamily DB29_00884 e95f08db87ebf4d7233a96e4a578abd8 258 Pfam PF09339 IclR helix-turn-helix domain 12 58 5.4E-8 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 DB29_00884 e95f08db87ebf4d7233a96e4a578abd8 258 Pfam PF01614 Bacterial transcriptional regulator 125 245 1.1E-23 T 14-10-2018 IPR014757 Transcription regulator IclR, C-terminal DB29_00884 e95f08db87ebf4d7233a96e4a578abd8 258 SMART SM00346 7 100 6.5E-10 T 14-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 DB29_01967 f869fdebc0c2858741336773f3ca2e47 212 Pfam PF04893 Yip1 domain 7 196 2.6E-20 T 14-10-2018 IPR006977 Yip1 domain GO:0016020 DB29_01278 3004390f5457a62415cd7dda74434390 203 Pfam PF09335 SNARE associated Golgi protein 30 160 1.1E-23 T 14-10-2018 IPR032816 SNARE associated Golgi protein DB29_02366 134053bad1b433f7852120113301577c 207 Gene3D G3DSA:3.40.50.360 1 207 7.8E-50 T 14-10-2018 IPR029039 Flavoprotein-like superfamily DB29_02366 134053bad1b433f7852120113301577c 207 Pfam PF02525 Flavodoxin-like fold 3 202 5.4E-36 T 14-10-2018 IPR003680 Flavodoxin-like fold DB29_02366 134053bad1b433f7852120113301577c 207 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 2 207 26.301 T 14-10-2018 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 DB29_02366 134053bad1b433f7852120113301577c 207 SUPERFAMILY SSF52218 1 200 3.39E-43 T 14-10-2018 IPR029039 Flavoprotein-like superfamily DB29_03235 825d2d0c99407356fa44c5760a5c8906 322 SUPERFAMILY SSF103481 199 300 2.62E-8 T 14-10-2018 DB29_03235 825d2d0c99407356fa44c5760a5c8906 322 Pfam PF00892 EamA-like transporter family 11 148 2.8E-11 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DB29_03235 825d2d0c99407356fa44c5760a5c8906 322 Pfam PF00892 EamA-like transporter family 164 299 2.5E-15 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DB29_04286 f29b6e829a7e3154a6e1ae5725863855 284 SUPERFAMILY SSF47240 2 282 2.27E-85 T 14-10-2018 IPR009078 Ferritin-like superfamily DB29_04286 f29b6e829a7e3154a6e1ae5725863855 284 Pfam PF05067 Manganese containing catalase 2 278 2.5E-65 T 14-10-2018 IPR007760 Manganese catalase DB29_04286 f29b6e829a7e3154a6e1ae5725863855 284 Gene3D G3DSA:1.20.1260.130 3 283 1.0E-100 T 14-10-2018 DB29_00650 f7be2ed460e5842373130336181e4123 158 Gene3D G3DSA:1.10.10.10 2 156 2.5E-25 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_00650 f7be2ed460e5842373130336181e4123 158 SUPERFAMILY SSF46785 28 155 1.95E-22 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_00650 f7be2ed460e5842373130336181e4123 158 Pfam PF01047 MarR family 47 105 4.6E-16 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DB29_00650 f7be2ed460e5842373130336181e4123 158 SMART SM00347 40 143 3.2E-24 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DB29_04219 d5e0a5fe451aae0e5e62c72b16b62b48 373 Gene3D G3DSA:3.40.50.2020 234 352 6.0E-7 T 14-10-2018 DB29_04219 d5e0a5fe451aae0e5e62c72b16b62b48 373 SUPERFAMILY SSF53271 236 316 3.8E-8 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like DB29_04030 c2ea7e8591afaf1fe4fa33ed144ebaed 309 PIRSF PIRSF000876 1 47 11.0 T 14-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 DB29_04030 c2ea7e8591afaf1fe4fa33ed144ebaed 309 PIRSF PIRSF000876 52 305 3.5E-67 T 14-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 DB29_04030 c2ea7e8591afaf1fe4fa33ed144ebaed 309 Pfam PF01339 CheB methylesterase 119 296 4.6E-49 T 14-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 DB29_04030 c2ea7e8591afaf1fe4fa33ed144ebaed 309 SUPERFAMILY SSF52738 115 302 1.11E-54 T 14-10-2018 IPR035909 Methylesterase CheB, C-terminal DB29_04030 c2ea7e8591afaf1fe4fa33ed144ebaed 309 Gene3D G3DSA:3.40.50.180 113 300 6.9E-57 T 14-10-2018 IPR035909 Methylesterase CheB, C-terminal DB29_04222 5e55c4173845375a831e43742bef8f7f 398 Gene3D G3DSA:3.30.420.280 218 395 8.5E-37 T 14-10-2018 DB29_04222 5e55c4173845375a831e43742bef8f7f 398 Pfam PF03237 Terminase-like family 24 226 5.8E-13 T 14-10-2018 IPR004921 Terminase large subunit, T4likevirus-type DB29_04222 5e55c4173845375a831e43742bef8f7f 398 Gene3D G3DSA:3.40.50.300 8 203 3.9E-25 T 14-10-2018 DB29_04222 5e55c4173845375a831e43742bef8f7f 398 TIGRFAM TIGR01547 phage_term_2: phage terminase, large subunit, PBSX family 21 392 6.7E-64 T 14-10-2018 IPR006437 Bacteriophage terminase, large subunit GO:0006323 DB29_01993 bd5c9667237b256230c8a6bd5b38d090 334 Gene3D G3DSA:2.160.20.10 35 333 4.2E-109 T 14-10-2018 IPR012334 Pectin lyase fold DB29_01993 bd5c9667237b256230c8a6bd5b38d090 334 Pfam PF00544 Pectate lyase 103 265 1.8E-34 T 14-10-2018 IPR002022 Pectate lyase DB29_01993 bd5c9667237b256230c8a6bd5b38d090 334 SMART SM00656 51 271 3.6E-29 T 14-10-2018 IPR002022 Pectate lyase DB29_01993 bd5c9667237b256230c8a6bd5b38d090 334 SUPERFAMILY SSF51126 37 332 1.57E-83 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor DB29_03544 0ee3c64de2f5a8b33ad4f62a017a3959 197 SUPERFAMILY SSF52540 1 191 1.54E-42 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_03544 0ee3c64de2f5a8b33ad4f62a017a3959 197 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 3 187 1.0E-63 T 14-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 DB29_03544 0ee3c64de2f5a8b33ad4f62a017a3959 197 Gene3D G3DSA:3.40.50.300 1 197 2.6E-80 T 14-10-2018 DB29_03544 0ee3c64de2f5a8b33ad4f62a017a3959 197 Pfam PF01121 Dephospho-CoA kinase 2 180 1.6E-64 T 14-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 DB29_03544 0ee3c64de2f5a8b33ad4f62a017a3959 197 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 1 197 27.772 T 14-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 DB29_01728 ac8798baf564cc99b2c6b85c560caa57 134 Hamap MF_01255 L-ectoine synthase [ectC]. 1 127 36.64 T 14-10-2018 IPR010462 Ectoine synthase GO:0019491|GO:0033990 KEGG: 00260+4.2.1.108 DB29_01728 ac8798baf564cc99b2c6b85c560caa57 134 Pfam PF06339 Ectoine synthase 1 125 1.4E-59 T 14-10-2018 IPR010462 Ectoine synthase GO:0019491|GO:0033990 KEGG: 00260+4.2.1.108 DB29_01728 ac8798baf564cc99b2c6b85c560caa57 134 SUPERFAMILY SSF51182 1 132 5.4E-23 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily DB29_01728 ac8798baf564cc99b2c6b85c560caa57 134 Gene3D G3DSA:2.60.120.10 1 115 8.2E-43 T 14-10-2018 IPR014710 RmlC-like jelly roll fold DB29_01728 ac8798baf564cc99b2c6b85c560caa57 134 ProDom PD080544 SYNTHASE 4.2.1.- LYASE L-ECTOINE DEHYDRATASE N-ACETYLDIAMINOBUTYRATE ECTOINE ENZYME SYNTHASE:ECTOINE ECTC 1 120 5.0E-65 T 14-10-2018 IPR010462 Ectoine synthase GO:0019491|GO:0033990 KEGG: 00260+4.2.1.108 DB29_00769 64b0c3355ff34e44b41fc073c853b334 177 Gene3D G3DSA:3.40.630.30 1 177 9.1E-49 T 14-10-2018 DB29_00769 64b0c3355ff34e44b41fc073c853b334 177 SUPERFAMILY SSF55729 3 173 1.2E-47 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase DB29_00769 64b0c3355ff34e44b41fc073c853b334 177 Pfam PF13302 Acetyltransferase (GNAT) domain 8 148 2.1E-32 T 14-10-2018 IPR000182 GNAT domain DB29_02099 bdfa7d9519b79f2d2819b717904e76c8 424 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 16 418 6.3E-133 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 DB29_02099 bdfa7d9519b79f2d2819b717904e76c8 424 PIRSF PIRSF006066 1 424 4.5E-154 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 DB29_02099 bdfa7d9519b79f2d2819b717904e76c8 424 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 6 414 5.5E-128 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit DB29_01704 afdb3e08e305631324e0281b30d828f8 407 Pfam PF00175 Oxidoreductase NAD-binding domain 272 379 1.1E-14 T 14-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 DB29_01704 afdb3e08e305631324e0281b30d828f8 407 SUPERFAMILY SSF63380 151 262 1.41E-30 T 14-10-2018 IPR017938 Riboflavin synthase-like beta-barrel DB29_01704 afdb3e08e305631324e0281b30d828f8 407 SUPERFAMILY SSF46458 1 147 3.49E-44 T 14-10-2018 IPR009050 Globin-like superfamily DB29_01704 afdb3e08e305631324e0281b30d828f8 407 PRINTS PR00406 Cytochrome B5 reductase signature 271 290 4.5E-5 T 14-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 DB29_01704 afdb3e08e305631324e0281b30d828f8 407 PRINTS PR00406 Cytochrome B5 reductase signature 248 262 4.5E-5 T 14-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 DB29_01704 afdb3e08e305631324e0281b30d828f8 407 PRINTS PR00406 Cytochrome B5 reductase signature 366 374 4.5E-5 T 14-10-2018 IPR001834 NADH:cytochrome b5 reductase (CBR) GO:0016491|GO:0055114 Reactome: R-HSA-1237044 DB29_01704 afdb3e08e305631324e0281b30d828f8 407 Gene3D G3DSA:3.40.50.80 261 405 7.9E-35 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain DB29_01704 afdb3e08e305631324e0281b30d828f8 407 Gene3D G3DSA:1.10.490.10 1 145 8.6E-60 T 14-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 DB29_01704 afdb3e08e305631324e0281b30d828f8 407 Hamap MF_01252 Flavohemoprotein [hmp]. 1 404 58.357 T 14-10-2018 IPR023950 Flavohemoprotein GO:0008941|GO:0019825|GO:0020037|GO:0051409|GO:0055114|GO:0071949 DB29_01704 afdb3e08e305631324e0281b30d828f8 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 235 244 7.8E-7 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 DB29_01704 afdb3e08e305631324e0281b30d828f8 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 271 290 7.8E-7 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 DB29_01704 afdb3e08e305631324e0281b30d828f8 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 366 374 7.8E-7 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 DB29_01704 afdb3e08e305631324e0281b30d828f8 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 206 213 7.8E-7 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 DB29_01704 afdb3e08e305631324e0281b30d828f8 407 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 185 195 7.8E-7 T 14-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 DB29_01704 afdb3e08e305631324e0281b30d828f8 407 Gene3D G3DSA:2.40.30.10 151 260 7.5E-41 T 14-10-2018 DB29_01704 afdb3e08e305631324e0281b30d828f8 407 Pfam PF00970 Oxidoreductase FAD-binding domain 157 260 4.4E-12 T 14-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 DB29_01704 afdb3e08e305631324e0281b30d828f8 407 Pfam PF00042 Globin 7 102 1.1E-11 T 14-10-2018 IPR000971 Globin GO:0020037 DB29_01704 afdb3e08e305631324e0281b30d828f8 407 SUPERFAMILY SSF52343 265 402 1.44E-37 T 14-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain DB29_01998 8b70fe3e235d113a4d98a26cd29907d0 94 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 8 50 1.4E-11 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 DB29_01998 8b70fe3e235d113a4d98a26cd29907d0 94 SUPERFAMILY SSF89447 1 51 6.8E-16 T 14-10-2018 IPR037914 SpoVT-AbrB domain superfamily DB29_01998 8b70fe3e235d113a4d98a26cd29907d0 94 Gene3D G3DSA:2.10.260.10 1 53 5.2E-25 T 14-10-2018 DB29_01998 8b70fe3e235d113a4d98a26cd29907d0 94 SMART SM00966 8 51 2.0E-9 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 DB29_01998 8b70fe3e235d113a4d98a26cd29907d0 94 TIGRFAM TIGR01439 lp_hng_hel_AbrB: transcriptional regulator, AbrB family 8 49 1.8E-10 T 14-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 DB29_00068 cd7e1f26ea32c75c3203a0bfab7a40bf 264 Gene3D G3DSA:3.40.50.720 3 261 1.3E-75 T 14-10-2018 DB29_00068 cd7e1f26ea32c75c3203a0bfab7a40bf 264 SUPERFAMILY SSF51735 1 151 6.5E-36 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_00068 cd7e1f26ea32c75c3203a0bfab7a40bf 264 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 129 262 1.8E-32 T 14-10-2018 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DB29_00068 cd7e1f26ea32c75c3203a0bfab7a40bf 264 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 2 264 29.662 T 14-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DB29_00068 cd7e1f26ea32c75c3203a0bfab7a40bf 264 SUPERFAMILY SSF55347 127 235 1.09E-37 T 14-10-2018 DB29_00068 cd7e1f26ea32c75c3203a0bfab7a40bf 264 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 2 264 6.0E-84 T 14-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DB29_00068 cd7e1f26ea32c75c3203a0bfab7a40bf 264 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 3 126 5.8E-30 T 14-10-2018 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DB29_00068 cd7e1f26ea32c75c3203a0bfab7a40bf 264 PIRSF PIRSF000161 1 264 1.7E-69 T 14-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DB29_00068 cd7e1f26ea32c75c3203a0bfab7a40bf 264 Gene3D G3DSA:3.30.360.10 128 233 1.3E-75 T 14-10-2018 DB29_00068 cd7e1f26ea32c75c3203a0bfab7a40bf 264 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 148 165 - T 14-10-2018 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 DB29_01719 6558394e035f173da0e4f936356bbdbb 378 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 373 3.4E-106 T 14-10-2018 IPR002155 Thiolase GO:0016747 DB29_01719 6558394e035f173da0e4f936356bbdbb 378 Gene3D G3DSA:3.40.47.10 5 259 1.3E-112 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 DB29_01719 6558394e035f173da0e4f936356bbdbb 378 SUPERFAMILY SSF53901 2 376 2.41E-51 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 DB29_01719 6558394e035f173da0e4f936356bbdbb 378 ProSitePatterns PS00737 Thiolases signature 2. 322 338 - T 14-10-2018 IPR020613 Thiolase, conserved site GO:0016747 DB29_01719 6558394e035f173da0e4f936356bbdbb 378 Pfam PF00108 Thiolase, N-terminal domain 4 245 7.6E-48 T 14-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 DB29_01719 6558394e035f173da0e4f936356bbdbb 378 PIRSF PIRSF000429 1 377 5.3E-99 T 14-10-2018 IPR002155 Thiolase GO:0016747 DB29_01719 6558394e035f173da0e4f936356bbdbb 378 Gene3D G3DSA:3.40.47.10 122 372 1.3E-112 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 DB29_01719 6558394e035f173da0e4f936356bbdbb 378 Pfam PF02803 Thiolase, C-terminal domain 254 373 1.0E-34 T 14-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 DB29_00610 5946a3a750fa4834c36d436812725f3e 304 Pfam PF00491 Arginase family 65 286 2.9E-13 T 14-10-2018 IPR006035 Ureohydrolase GO:0046872 DB29_00610 5946a3a750fa4834c36d436812725f3e 304 SUPERFAMILY SSF52768 4 289 1.39E-39 T 14-10-2018 IPR023696 Ureohydrolase domain superfamily DB29_00610 5946a3a750fa4834c36d436812725f3e 304 Gene3D G3DSA:3.40.800.10 31 294 5.8E-26 T 14-10-2018 DB29_01397 21349a1c11fa06bc3b1cce849a90a188 356 Pfam PF03786 D-mannonate dehydratase (UxuA) 1 348 7.0E-161 T 14-10-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 DB29_01397 21349a1c11fa06bc3b1cce849a90a188 356 TIGRFAM TIGR00695 uxuA: mannonate dehydratase 1 142 1.9E-59 T 14-10-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 DB29_01397 21349a1c11fa06bc3b1cce849a90a188 356 TIGRFAM TIGR00695 uxuA: mannonate dehydratase 143 352 2.5E-76 T 14-10-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 DB29_01397 21349a1c11fa06bc3b1cce849a90a188 356 Hamap MF_00106 Mannonate dehydratase [uxuA]. 1 356 167.202 T 14-10-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 DB29_01397 21349a1c11fa06bc3b1cce849a90a188 356 Gene3D G3DSA:3.20.20.150 1 354 1.5E-149 T 14-10-2018 DB29_01397 21349a1c11fa06bc3b1cce849a90a188 356 PIRSF PIRSF016049 1 354 1.0E-122 T 14-10-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 DB29_01397 21349a1c11fa06bc3b1cce849a90a188 356 SUPERFAMILY SSF51658 1 345 1.57E-90 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily DB29_03248 92feab5857c4cfb07a6b5c806ca198d7 425 Gene3D G3DSA:3.40.50.1980 228 344 9.2E-129 T 14-10-2018 DB29_03248 92feab5857c4cfb07a6b5c806ca198d7 425 PIRSF PIRSF000099 2 425 3.7E-175 T 14-10-2018 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 DB29_03248 92feab5857c4cfb07a6b5c806ca198d7 425 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 29 421 4.6E-171 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 DB29_03248 92feab5857c4cfb07a6b5c806ca198d7 425 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 1 422 42.998 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 DB29_03248 92feab5857c4cfb07a6b5c806ca198d7 425 Gene3D G3DSA:3.40.50.1980 28 226 9.2E-129 T 14-10-2018 DB29_03248 92feab5857c4cfb07a6b5c806ca198d7 425 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 224 256 - T 14-10-2018 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23 DB29_03248 92feab5857c4cfb07a6b5c806ca198d7 425 SUPERFAMILY SSF53720 23 422 9.22E-89 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 DB29_03248 92feab5857c4cfb07a6b5c806ca198d7 425 Pfam PF00815 Histidinol dehydrogenase 25 422 1.0E-173 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 DB29_03248 92feab5857c4cfb07a6b5c806ca198d7 425 PRINTS PR00083 Histidinol dehydrogenase signature 29 53 9.0E-90 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 DB29_03248 92feab5857c4cfb07a6b5c806ca198d7 425 PRINTS PR00083 Histidinol dehydrogenase signature 130 156 9.0E-90 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 DB29_03248 92feab5857c4cfb07a6b5c806ca198d7 425 PRINTS PR00083 Histidinol dehydrogenase signature 246 265 9.0E-90 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 DB29_03248 92feab5857c4cfb07a6b5c806ca198d7 425 PRINTS PR00083 Histidinol dehydrogenase signature 315 340 9.0E-90 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 DB29_03248 92feab5857c4cfb07a6b5c806ca198d7 425 PRINTS PR00083 Histidinol dehydrogenase signature 356 374 9.0E-90 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 DB29_03248 92feab5857c4cfb07a6b5c806ca198d7 425 PRINTS PR00083 Histidinol dehydrogenase signature 195 220 9.0E-90 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 DB29_03248 92feab5857c4cfb07a6b5c806ca198d7 425 PRINTS PR00083 Histidinol dehydrogenase signature 224 245 9.0E-90 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 DB29_03248 92feab5857c4cfb07a6b5c806ca198d7 425 PRINTS PR00083 Histidinol dehydrogenase signature 165 191 9.0E-90 T 14-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 DB29_01215 dbc74446d3f3bcb1df20e75613868ccb 114 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 4 108 2.8E-30 T 14-10-2018 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like DB29_03230 f000602ca0c04d087a02008850be0bb6 230 SUPERFAMILY SSF52540 3 222 4.96E-71 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_03230 f000602ca0c04d087a02008850be0bb6 230 SMART SM00382 29 216 1.2E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_03230 f000602ca0c04d087a02008850be0bb6 230 Pfam PF00005 ABC transporter 20 167 9.7E-37 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB29_03230 f000602ca0c04d087a02008850be0bb6 230 Gene3D G3DSA:3.40.50.300 1 226 4.1E-68 T 14-10-2018 DB29_03230 f000602ca0c04d087a02008850be0bb6 230 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB29_03230 f000602ca0c04d087a02008850be0bb6 230 TIGRFAM TIGR02673 FtsE: cell division ATP-binding protein FtsE 3 216 7.1E-87 T 14-10-2018 IPR005286 Cell division protein FtsE, ATP-binding GO:0005524|GO:0051301 DB29_03445 193715238cdcb9a98e8b6953f7a4f2f4 135 Pfam PF01894 Uncharacterised protein family UPF0047 16 130 1.5E-38 T 14-10-2018 IPR001602 Uncharacterised protein family UPF0047 DB29_03445 193715238cdcb9a98e8b6953f7a4f2f4 135 ProSitePatterns PS01314 Uncharacterized protein family UPF0047 signature. 94 112 - T 14-10-2018 IPR001602 Uncharacterised protein family UPF0047 DB29_03445 193715238cdcb9a98e8b6953f7a4f2f4 135 SUPERFAMILY SSF111038 3 132 2.49E-46 T 14-10-2018 IPR035917 YjbQ-like superfamily DB29_03445 193715238cdcb9a98e8b6953f7a4f2f4 135 PIRSF PIRSF004681 1 133 2.6E-38 T 14-10-2018 IPR001602 Uncharacterised protein family UPF0047 DB29_03445 193715238cdcb9a98e8b6953f7a4f2f4 135 TIGRFAM TIGR00149 TIGR00149_YjbQ: secondary thiamine-phosphate synthase enzyme 3 132 3.5E-47 T 14-10-2018 IPR001602 Uncharacterised protein family UPF0047 DB29_03445 193715238cdcb9a98e8b6953f7a4f2f4 135 Gene3D G3DSA:2.60.120.460 1 132 1.1E-54 T 14-10-2018 IPR035917 YjbQ-like superfamily DB29_01932 b690b9b7943c6e988befefee4c0dce7a 171 Gene3D G3DSA:4.10.860.10 127 171 5.7E-7 T 14-10-2018 DB29_01932 b690b9b7943c6e988befefee4c0dce7a 171 SUPERFAMILY SSF46600 130 168 2.88E-6 T 14-10-2018 IPR036876 UVR domain superfamily DB29_01932 b690b9b7943c6e988befefee4c0dce7a 171 PIRSF PIRSF015034 1 171 6.4E-73 T 14-10-2018 IPR025542 YacH protein DB29_01932 b690b9b7943c6e988befefee4c0dce7a 171 Pfam PF02151 UvrB/uvrC motif 131 166 4.1E-7 T 14-10-2018 IPR001943 UVR domain GO:0005515 DB29_02549 1a8e65f77766e8205333f352bc7790e6 102 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 3 85 1.4E-14 T 14-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 DB29_02549 1a8e65f77766e8205333f352bc7790e6 102 SUPERFAMILY SSF52794 1 102 8.89E-27 T 14-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 DB29_02549 1a8e65f77766e8205333f352bc7790e6 102 Gene3D G3DSA:3.40.50.2300 2 102 8.8E-27 T 14-10-2018 DB29_00494 c1d78dbc9ae15c38e1e27c984cfc2995 205 Pfam PF09911 Uncharacterized protein conserved in bacteria (DUF2140) 12 196 3.0E-46 T 14-10-2018 IPR018672 Protein of unknown function DUF2140 DB29_01078 01380be9aee55479038d85c4586022ad 276 Pfam PF09851 Short C-terminal domain 248 275 8.8E-10 T 14-10-2018 IPR018649 SHOCT domain DB29_02496 ee86ac06e12675455da600b9f1d4e2c1 90 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 5 20 2.9E-15 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DB29_02496 ee86ac06e12675455da600b9f1d4e2c1 90 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 37 52 2.9E-15 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DB29_02496 ee86ac06e12675455da600b9f1d4e2c1 90 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 52 67 2.9E-15 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DB29_02496 ee86ac06e12675455da600b9f1d4e2c1 90 SUPERFAMILY SSF46785 3 82 3.16E-27 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_02496 ee86ac06e12675455da600b9f1d4e2c1 90 SMART SM00418 3 81 1.1E-29 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DB29_02496 ee86ac06e12675455da600b9f1d4e2c1 90 Gene3D G3DSA:1.10.10.10 1 87 2.2E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_02496 ee86ac06e12675455da600b9f1d4e2c1 90 Pfam PF01022 Bacterial regulatory protein, arsR family 10 55 5.6E-16 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DB29_00298 a3bc55a2168aa59eececc160321a1028 74 Pfam PF07561 Domain of Unknown Function (DUF1540) 5 68 5.9E-16 T 14-10-2018 IPR011437 Domain of unknown function DUF1540 DB29_02242 8461567d54a899ab060f4d38d05b7102 247 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 2 247 1.1E-81 T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 DB29_02242 8461567d54a899ab060f4d38d05b7102 247 Hamap MF_01974 Methionine aminopeptidase [map]. 1 247 32.361 T 14-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 DB29_02242 8461567d54a899ab060f4d38d05b7102 247 Pfam PF00557 Metallopeptidase family M24 12 239 5.3E-45 T 14-10-2018 IPR000994 Peptidase M24 DB29_02242 8461567d54a899ab060f4d38d05b7102 247 SUPERFAMILY SSF55920 3 246 7.72E-65 T 14-10-2018 IPR036005 Creatinase/aminopeptidase-like DB29_02242 8461567d54a899ab060f4d38d05b7102 247 PRINTS PR00599 Methionine aminopeptidase-1 signature 190 202 1.3E-18 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 DB29_02242 8461567d54a899ab060f4d38d05b7102 247 PRINTS PR00599 Methionine aminopeptidase-1 signature 158 170 1.3E-18 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 DB29_02242 8461567d54a899ab060f4d38d05b7102 247 PRINTS PR00599 Methionine aminopeptidase-1 signature 88 104 1.3E-18 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 DB29_02242 8461567d54a899ab060f4d38d05b7102 247 PRINTS PR00599 Methionine aminopeptidase-1 signature 66 79 1.3E-18 T 14-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 DB29_02242 8461567d54a899ab060f4d38d05b7102 247 Gene3D G3DSA:3.90.230.10 2 247 1.2E-77 T 14-10-2018 DB29_03728 f376c22d9e897cb430f204ff3184dc56 75 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 2 50 1.3E-9 T 14-10-2018 IPR010093 SinI-like, DNA-binding domain GO:0003677 DB29_00609 c23b0ba6152f5d13736856dbfcc6d36c 113 SUPERFAMILY SSF46785 14 110 6.03E-32 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_00609 c23b0ba6152f5d13736856dbfcc6d36c 113 Pfam PF01638 HxlR-like helix-turn-helix 24 110 6.4E-32 T 14-10-2018 IPR002577 Helix-turn-helix, HxlR type DB29_00609 c23b0ba6152f5d13736856dbfcc6d36c 113 Gene3D G3DSA:1.10.10.10 3 113 3.9E-36 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_03291 460f43cf4c2cf90a2a73a89fe636783e 324 SUPERFAMILY SSF51679 2 319 6.15E-68 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 DB29_03291 460f43cf4c2cf90a2a73a89fe636783e 324 Pfam PF00296 Luciferase-like monooxygenase 15 296 4.6E-35 T 14-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 DB29_03291 460f43cf4c2cf90a2a73a89fe636783e 324 TIGRFAM TIGR03558 oxido_grp_1: luciferase family oxidoreductase, group 1 3 319 1.0E-100 T 14-10-2018 IPR019949 Luciferase family oxidoreductase, group 1 DB29_03291 460f43cf4c2cf90a2a73a89fe636783e 324 Gene3D G3DSA:3.20.20.30 1 323 1.2E-86 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 DB29_00838 6beb41bbfe3fedade1dcd544af31c55e 413 SUPERFAMILY SSF55347 119 323 6.54E-29 T 14-10-2018 DB29_00838 6beb41bbfe3fedade1dcd544af31c55e 413 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 126 259 1.2E-22 T 14-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 DB29_00838 6beb41bbfe3fedade1dcd544af31c55e 413 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 11 114 2.0E-16 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 DB29_00838 6beb41bbfe3fedade1dcd544af31c55e 413 SUPERFAMILY SSF51735 11 145 1.47E-31 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_00838 6beb41bbfe3fedade1dcd544af31c55e 413 Gene3D G3DSA:3.40.50.720 4 124 1.8E-19 T 14-10-2018 DB29_03604 62bbdf18b81fba0b87151d285493017d 499 Pfam PF13632 Glycosyl transferase family group 2 190 359 1.7E-10 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 DB29_03604 62bbdf18b81fba0b87151d285493017d 499 Gene3D G3DSA:3.90.550.10 3 291 1.4E-24 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DB29_03604 62bbdf18b81fba0b87151d285493017d 499 SUPERFAMILY SSF53448 13 341 5.44E-30 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DB29_03604 62bbdf18b81fba0b87151d285493017d 499 Pfam PF00535 Glycosyl transferase family 2 22 153 1.0E-12 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 DB29_01673 9dd0c2bcfa4490578a37a27e88fbe627 392 SUPERFAMILY SSF51569 56 332 2.2E-11 T 14-10-2018 DB29_01673 9dd0c2bcfa4490578a37a27e88fbe627 392 Gene3D G3DSA:3.20.20.500 2 382 4.3E-165 T 14-10-2018 DB29_01673 9dd0c2bcfa4490578a37a27e88fbe627 392 Pfam PF06187 Protein of unknown function (DUF993) 5 386 5.2E-181 T 14-10-2018 IPR009334 Protein of unknown function DUF993 DB29_00429 d5cb3b6a525c57b2b1249ba15d23d1cc 156 SUPERFAMILY SSF50346 3 66 2.75E-5 T 14-10-2018 IPR011033 PRC-barrel-like superfamily DB29_00429 d5cb3b6a525c57b2b1249ba15d23d1cc 156 SUPERFAMILY SSF50346 90 153 1.46E-8 T 14-10-2018 IPR011033 PRC-barrel-like superfamily DB29_00429 d5cb3b6a525c57b2b1249ba15d23d1cc 156 Pfam PF05239 PRC-barrel domain 90 139 1.9E-6 T 14-10-2018 IPR027275 PRC-barrel domain DB29_02771 a2b92669ade9e52d6a508657912a1fe1 362 Pfam PF03845 Spore germination protein 7 323 1.1E-52 T 14-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 DB29_02771 a2b92669ade9e52d6a508657912a1fe1 362 TIGRFAM TIGR00912 2A0309: spore germination protein (amino acid permease) 7 358 4.3E-52 T 14-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 DB29_00197 a69a09ef22316888b32dc6bfc7af497a 118 TIGRFAM TIGR02839 spore_V_AE: stage V sporulation protein AE 3 115 1.1E-48 T 14-10-2018 IPR014204 Sporulation stage V, protein AE DB29_00197 a69a09ef22316888b32dc6bfc7af497a 118 Pfam PF03862 SpoVAC/SpoVAEB sporulation membrane protein 3 109 3.5E-33 T 14-10-2018 IPR005562 SpoVA DB29_02998 ceadce2785f106e1e526e188ae185be7 252 SUPERFAMILY SSF51658 24 248 7.0E-32 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily DB29_02998 ceadce2785f106e1e526e188ae185be7 252 Pfam PF01261 Xylose isomerase-like TIM barrel 25 206 1.6E-10 T 14-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain DB29_02998 ceadce2785f106e1e526e188ae185be7 252 Gene3D G3DSA:3.20.20.150 1 249 5.2E-51 T 14-10-2018 DB29_02007 e6defb723389f23df524321dfa97b0ec 478 Gene3D G3DSA:3.40.640.10 46 281 2.9E-94 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DB29_02007 e6defb723389f23df524321dfa97b0ec 478 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 411 468 3.5E-10 T 14-10-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 DB29_02007 e6defb723389f23df524321dfa97b0ec 478 SUPERFAMILY SSF53383 5 362 1.5E-75 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DB29_02007 e6defb723389f23df524321dfa97b0ec 478 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 5 298 1.6E-60 T 14-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 DB29_02007 e6defb723389f23df524321dfa97b0ec 478 Gene3D G3DSA:3.90.105.10 413 469 1.7E-16 T 14-10-2018 DB29_02007 e6defb723389f23df524321dfa97b0ec 478 SUPERFAMILY SSF55904 340 475 1.24E-23 T 14-10-2018 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily GO:0003824 DB29_02007 e6defb723389f23df524321dfa97b0ec 478 Gene3D G3DSA:3.90.1150.150 282 373 2.9E-94 T 14-10-2018 DB29_04285 bdb38b9504ca7daa91d675f3e468a278 375 SMART SM00646 268 374 5.6E-21 T 14-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 DB29_04285 bdb38b9504ca7daa91d675f3e468a278 375 SMART SM00287 118 181 0.0018 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type DB29_04285 bdb38b9504ca7daa91d675f3e468a278 375 SMART SM00287 30 91 3.7E-14 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type DB29_04285 bdb38b9504ca7daa91d675f3e468a278 375 SUPERFAMILY SSF53187 209 374 2.7E-45 T 14-10-2018 DB29_04285 bdb38b9504ca7daa91d675f3e468a278 375 Gene3D G3DSA:3.40.630.40 195 375 1.8E-49 T 14-10-2018 DB29_04285 bdb38b9504ca7daa91d675f3e468a278 375 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 210 374 5.3E-46 T 14-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 DB29_04285 bdb38b9504ca7daa91d675f3e468a278 375 Pfam PF08239 Bacterial SH3 domain 127 178 2.2E-8 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type DB29_04285 bdb38b9504ca7daa91d675f3e468a278 375 Pfam PF08239 Bacterial SH3 domain 39 87 1.4E-11 T 14-10-2018 IPR003646 SH3-like domain, bacterial-type DB29_04285 bdb38b9504ca7daa91d675f3e468a278 375 Gene3D G3DSA:2.30.30.40 29 96 3.0E-14 T 14-10-2018 DB29_04285 bdb38b9504ca7daa91d675f3e468a278 375 Gene3D G3DSA:2.30.30.40 119 185 2.0E-10 T 14-10-2018 DB29_00804 c8794d69a781051254d4360ac2ac4c5d 127 Pfam PF16888 Domain of unknown function (DUF5082) 5 124 1.3E-37 T 14-10-2018 IPR031681 Protein of unknown function DUF5082 DB29_00804 c8794d69a781051254d4360ac2ac4c5d 127 ProDom PD338809 BH2346 YXIB BH4015 BH0976 PREFOLDIN 17 108 1.0E-47 T 14-10-2018 DB29_01867 1ad227d875c0ea60b73882082022654a 70 SUPERFAMILY SSF47413 2 67 8.16E-18 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DB29_01867 1ad227d875c0ea60b73882082022654a 70 Gene3D G3DSA:1.10.260.40 1 69 4.5E-12 T 14-10-2018 DB29_01867 1ad227d875c0ea60b73882082022654a 70 SMART SM00530 5 61 1.8E-6 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DB29_01867 1ad227d875c0ea60b73882082022654a 70 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 5 65 6.0E-23 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DB29_01176 50ab6c941dc2d18502927f28f4e09439 263 Pfam PF05857 TraX protein 2 259 8.7E-38 T 14-10-2018 IPR008875 TraX DB29_00458 fbadf80fb38d789e13f17eb1bb9f7771 154 Gene3D G3DSA:3.30.240.20 97 154 6.2E-16 T 14-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily DB29_00458 fbadf80fb38d789e13f17eb1bb9f7771 154 Pfam PF04239 Protein of unknown function (DUF421) 88 133 6.8E-7 T 14-10-2018 IPR007353 Protein of unknown function DUF421 DB29_03521 eec6a4461bef71d572ec6f52b5e1eb0e 435 Gene3D G3DSA:3.10.129.10 319 432 9.1E-9 T 14-10-2018 DB29_03521 eec6a4461bef71d572ec6f52b5e1eb0e 435 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 58 1.9E-6 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DB29_03521 eec6a4461bef71d572ec6f52b5e1eb0e 435 Pfam PF03061 Thioesterase superfamily 351 424 1.0E-6 T 14-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 DB29_03521 eec6a4461bef71d572ec6f52b5e1eb0e 435 Gene3D G3DSA:1.10.10.10 3 70 1.6E-6 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_03521 eec6a4461bef71d572ec6f52b5e1eb0e 435 Gene3D G3DSA:3.10.580.10 186 314 3.0E-23 T 14-10-2018 DB29_03521 eec6a4461bef71d572ec6f52b5e1eb0e 435 SMART SM00116 259 307 1.7E-9 T 14-10-2018 IPR000644 CBS domain DB29_03521 eec6a4461bef71d572ec6f52b5e1eb0e 435 SMART SM00116 200 248 3.9 T 14-10-2018 IPR000644 CBS domain DB29_03521 eec6a4461bef71d572ec6f52b5e1eb0e 435 Pfam PF00571 CBS domain 253 307 2.8E-9 T 14-10-2018 IPR000644 CBS domain DB29_03521 eec6a4461bef71d572ec6f52b5e1eb0e 435 Pfam PF00571 CBS domain 219 245 5.8E-4 T 14-10-2018 IPR000644 CBS domain DB29_03521 eec6a4461bef71d572ec6f52b5e1eb0e 435 SUPERFAMILY SSF54631 182 310 4.55E-30 T 14-10-2018 DB29_03521 eec6a4461bef71d572ec6f52b5e1eb0e 435 Pfam PF07085 DRTGG domain 76 178 1.3E-28 T 14-10-2018 IPR010766 DRTGG KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 DB29_03521 eec6a4461bef71d572ec6f52b5e1eb0e 435 SUPERFAMILY SSF75138 72 185 3.53E-28 T 14-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily DB29_03521 eec6a4461bef71d572ec6f52b5e1eb0e 435 SUPERFAMILY SSF54637 333 432 7.99E-18 T 14-10-2018 IPR029069 HotDog domain superfamily DB29_03521 eec6a4461bef71d572ec6f52b5e1eb0e 435 SUPERFAMILY SSF46785 5 54 1.3E-6 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_03521 eec6a4461bef71d572ec6f52b5e1eb0e 435 Gene3D G3DSA:3.40.1390.20 71 178 1.1E-25 T 14-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily DB29_03727 2722cf5136a44686f413e7e833ea7470 216 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 11 209 5.4E-65 T 14-10-2018 IPR005744 Hly-III GO:0016021|GO:0019835 DB29_03727 2722cf5136a44686f413e7e833ea7470 216 Pfam PF03006 Haemolysin-III related 7 204 6.3E-42 T 14-10-2018 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 DB29_00959 6cc8a2b764fe872f1076f0d6d755902b 227 TIGRFAM TIGR01737 FGAM_synth_I: phosphoribosylformylglycinamidine synthase I 1 217 1.4E-90 T 14-10-2018 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 DB29_00959 6cc8a2b764fe872f1076f0d6d755902b 227 SMART SM01211 1 219 9.3E-131 T 14-10-2018 DB29_00959 6cc8a2b764fe872f1076f0d6d755902b 227 PIRSF PIRSF001586 1 222 1.3E-83 T 14-10-2018 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 DB29_00959 6cc8a2b764fe872f1076f0d6d755902b 227 SUPERFAMILY SSF52317 1 218 6.81E-72 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like DB29_00959 6cc8a2b764fe872f1076f0d6d755902b 227 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 2 204 6.6E-41 T 14-10-2018 DB29_00959 6cc8a2b764fe872f1076f0d6d755902b 227 Gene3D G3DSA:3.40.50.880 1 220 5.2E-68 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like DB29_00959 6cc8a2b764fe872f1076f0d6d755902b 227 Hamap MF_00421 Phosphoribosylformylglycinamidine synthase subunit PurQ [purQ]. 1 217 43.17 T 14-10-2018 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 DB29_02738 ae9faeedd3aee60c1e9b5ce1faae9bc0 288 Pfam PF00892 EamA-like transporter family 149 276 3.3E-20 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DB29_02738 ae9faeedd3aee60c1e9b5ce1faae9bc0 288 Pfam PF00892 EamA-like transporter family 9 134 4.3E-19 T 14-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 DB29_02738 ae9faeedd3aee60c1e9b5ce1faae9bc0 288 SUPERFAMILY SSF103481 35 135 6.15E-15 T 14-10-2018 DB29_02738 ae9faeedd3aee60c1e9b5ce1faae9bc0 288 SUPERFAMILY SSF103481 183 276 2.62E-13 T 14-10-2018 DB29_00544 36930154cdc3bb66bc818914bce368f5 591 Gene3D G3DSA:2.160.20.10 334 557 7.3E-11 T 14-10-2018 IPR012334 Pectin lyase fold DB29_00544 36930154cdc3bb66bc818914bce368f5 591 Gene3D G3DSA:2.160.20.10 14 290 8.7E-18 T 14-10-2018 IPR012334 Pectin lyase fold DB29_00544 36930154cdc3bb66bc818914bce368f5 591 SUPERFAMILY SSF51126 271 522 1.78E-13 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor DB29_00544 36930154cdc3bb66bc818914bce368f5 591 Pfam PF13229 Right handed beta helix region 94 241 4.4E-14 T 14-10-2018 IPR039448 Right handed beta helix domain DB29_00544 36930154cdc3bb66bc818914bce368f5 591 Pfam PF13229 Right handed beta helix region 382 523 4.5E-10 T 14-10-2018 IPR039448 Right handed beta helix domain DB29_00544 36930154cdc3bb66bc818914bce368f5 591 SUPERFAMILY SSF51126 3 240 1.04E-27 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor DB29_04001 54583b6c9a77fc42d816869389c96c17 300 Pfam PF00589 Phage integrase family 114 286 1.0E-44 T 14-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 DB29_04001 54583b6c9a77fc42d816869389c96c17 300 Gene3D G3DSA:1.10.443.10 113 294 1.1E-58 T 14-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 DB29_04001 54583b6c9a77fc42d816869389c96c17 300 SUPERFAMILY SSF47823 6 100 9.42E-17 T 14-10-2018 DB29_04001 54583b6c9a77fc42d816869389c96c17 300 SUPERFAMILY SSF56349 108 298 2.83E-53 T 14-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 DB29_04001 54583b6c9a77fc42d816869389c96c17 300 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 7 300 52.757 T 14-10-2018 IPR023009 Tyrosine recombinase XerC/XerD DB29_04001 54583b6c9a77fc42d816869389c96c17 300 TIGRFAM TIGR02224 recomb_XerC: tyrosine recombinase XerC 11 300 6.0E-105 T 14-10-2018 IPR011931 Tyrosine recombinase XerC GO:0003677|GO:0006310|GO:0007059|GO:0015074|GO:0051301 DB29_04001 54583b6c9a77fc42d816869389c96c17 300 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 9 92 2.4E-21 T 14-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 DB29_04001 54583b6c9a77fc42d816869389c96c17 300 Gene3D G3DSA:1.10.150.130 5 101 3.8E-25 T 14-10-2018 IPR010998 Integrase/recombinase, N-terminal DB29_03895 0971eae631633a3c8699366e0c1ad866 183 SUPERFAMILY SSF53335 1 180 7.03E-49 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DB29_03895 0971eae631633a3c8699366e0c1ad866 183 Gene3D G3DSA:3.40.50.150 1 183 1.1E-56 T 14-10-2018 DB29_03895 0971eae631633a3c8699366e0c1ad866 183 Pfam PF03602 Conserved hypothetical protein 95 1 181 3.2E-56 T 14-10-2018 DB29_03895 0971eae631633a3c8699366e0c1ad866 183 PIRSF PIRSF004553 1 182 8.6E-48 T 14-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 DB29_03895 0971eae631633a3c8699366e0c1ad866 183 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 2 182 8.6E-53 T 14-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 DB29_03642 bcbcbb321813af479ee1411c382877ac 227 Gene3D G3DSA:3.30.160.540 6 87 1.4E-26 T 14-10-2018 DB29_03642 bcbcbb321813af479ee1411c382877ac 227 Pfam PF03775 Septum formation inhibitor MinC, C-terminal domain 108 208 5.5E-25 T 14-10-2018 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 DB29_03642 bcbcbb321813af479ee1411c382877ac 227 SUPERFAMILY SSF63848 105 210 8.89E-25 T 14-10-2018 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily GO:0000902 DB29_03642 bcbcbb321813af479ee1411c382877ac 227 Gene3D G3DSA:2.160.20.70 101 225 5.1E-30 T 14-10-2018 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal GO:0000902 DB29_03642 bcbcbb321813af479ee1411c382877ac 227 TIGRFAM TIGR01222 minC: septum site-determining protein MinC 8 210 8.8E-28 T 14-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 DB29_03642 bcbcbb321813af479ee1411c382877ac 227 Hamap MF_00267 Probable septum site-determining protein MinC [minC]. 7 212 20.265 T 14-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 DB29_02846 8dc8880324e5fdabb243b9c4114cc430 107 SUPERFAMILY SSF54909 1 96 5.78E-25 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel DB29_02846 8dc8880324e5fdabb243b9c4114cc430 107 Gene3D G3DSA:3.30.70.100 1 106 1.1E-30 T 14-10-2018 DB29_02846 8dc8880324e5fdabb243b9c4114cc430 107 Hamap MF_01272 Heme oxygenase (staphylobilin-producing) [isdG]. 1 102 27.02 T 14-10-2018 IPR023953 Heme oxygenase IsdG GO:0004392|GO:0033212|GO:0055114 DB29_02846 8dc8880324e5fdabb243b9c4114cc430 107 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 76 3.2E-13 T 14-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain DB29_01344 88a71c066c977fafb3af4be89c3c4c48 648 SMART SM00028 197 230 190.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DB29_01344 88a71c066c977fafb3af4be89c3c4c48 648 SMART SM00028 299 332 350.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DB29_01344 88a71c066c977fafb3af4be89c3c4c48 648 SMART SM00028 265 298 93.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DB29_01344 88a71c066c977fafb3af4be89c3c4c48 648 SMART SM00028 231 264 0.089 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DB29_01344 88a71c066c977fafb3af4be89c3c4c48 648 SUPERFAMILY SSF48452 221 349 3.8E-19 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DB29_01344 88a71c066c977fafb3af4be89c3c4c48 648 SUPERFAMILY SSF46565 2 53 9.68E-7 T 14-10-2018 IPR036869 Chaperone J-domain superfamily DB29_01344 88a71c066c977fafb3af4be89c3c4c48 648 SMART SM00271 1 53 0.0039 T 14-10-2018 IPR001623 DnaJ domain DB29_01344 88a71c066c977fafb3af4be89c3c4c48 648 Gene3D G3DSA:1.10.287.110 1 56 4.4E-5 T 14-10-2018 IPR036869 Chaperone J-domain superfamily DB29_01344 88a71c066c977fafb3af4be89c3c4c48 648 Pfam PF06889 Protein of unknown function (DUF1266) 476 640 5.9E-32 T 14-10-2018 IPR009677 Protein of unknown function DUF1266 DB29_01344 88a71c066c977fafb3af4be89c3c4c48 648 Gene3D G3DSA:1.25.40.10 87 353 3.9E-19 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DB29_03457 40930316f07c266d74ce0805535eba7c 134 Pfam PF03788 LrgA family 19 109 3.9E-25 T 14-10-2018 IPR005538 LrgA/CidA family GO:0016021 DB29_03552 803525b8657bb4dc5048177abcfeca98 282 Pfam PF08812 YtxC-like family 61 273 2.9E-55 T 14-10-2018 IPR014199 Sporulation protein YtxC DB29_03552 803525b8657bb4dc5048177abcfeca98 282 TIGRFAM TIGR02834 spo_ytxC: putative sporulation protein YtxC 2 275 3.2E-98 T 14-10-2018 IPR014199 Sporulation protein YtxC DB29_03552 803525b8657bb4dc5048177abcfeca98 282 PIRSF PIRSF012563 1 282 3.8E-90 T 14-10-2018 IPR014199 Sporulation protein YtxC DB29_01214 426d3868735050add4ff23b8e8eb3c29 495 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 321 340 5.3E-16 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DB29_01214 426d3868735050add4ff23b8e8eb3c29 495 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 373 399 5.3E-16 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DB29_01214 426d3868735050add4ff23b8e8eb3c29 495 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 132 151 5.3E-16 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DB29_01214 426d3868735050add4ff23b8e8eb3c29 495 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 162 186 5.3E-16 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DB29_01214 426d3868735050add4ff23b8e8eb3c29 495 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 233 257 5.3E-16 T 14-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DB29_01214 426d3868735050add4ff23b8e8eb3c29 495 Pfam PF00361 Proton-conducting membrane transporter 127 415 5.2E-48 T 14-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 DB29_03761 b8ff891c4a69d0aa542ee98acdca17da 146 SUPERFAMILY SSF54523 11 92 4.24E-5 T 14-10-2018 DB29_03761 b8ff891c4a69d0aa542ee98acdca17da 146 PIRSF PIRSF021292 5 146 2.2E-47 T 14-10-2018 IPR016785 ComG operon protein 4 GO:0030420 DB29_03761 b8ff891c4a69d0aa542ee98acdca17da 146 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 10 29 4.4E-5 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site DB29_03761 b8ff891c4a69d0aa542ee98acdca17da 146 Pfam PF07963 Prokaryotic N-terminal methylation motif 9 28 1.7E-4 T 14-10-2018 IPR012902 Prokaryotic N-terminal methylation site DB29_01534 9d28d36849a54f47d3f170c634bcdeef 182 SUPERFAMILY SSF55729 3 162 2.93E-31 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase DB29_01534 9d28d36849a54f47d3f170c634bcdeef 182 Pfam PF13302 Acetyltransferase (GNAT) domain 3 134 2.4E-18 T 14-10-2018 IPR000182 GNAT domain DB29_01534 9d28d36849a54f47d3f170c634bcdeef 182 Gene3D G3DSA:3.40.630.30 1 164 1.7E-33 T 14-10-2018 DB29_00212 3389bfb1ae9c5d222f539b2c384bd4f9 394 SUPERFAMILY SSF53649 4 391 8.77E-76 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 DB29_00212 3389bfb1ae9c5d222f539b2c384bd4f9 394 SUPERFAMILY SSF143856 102 218 6.8E-50 T 14-10-2018 IPR024052 Phosphopentomutase DeoB cap domain superfamily GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 DB29_00212 3389bfb1ae9c5d222f539b2c384bd4f9 394 TIGRFAM TIGR01696 deoB: phosphopentomutase 7 385 2.5E-186 T 14-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 DB29_00212 3389bfb1ae9c5d222f539b2c384bd4f9 394 Hamap MF_00740 Phosphopentomutase [deoB]. 5 388 53.98 T 14-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 DB29_00212 3389bfb1ae9c5d222f539b2c384bd4f9 394 Gene3D G3DSA:3.30.70.1250 100 218 5.8E-172 T 14-10-2018 IPR024052 Phosphopentomutase DeoB cap domain superfamily GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 DB29_00212 3389bfb1ae9c5d222f539b2c384bd4f9 394 Pfam PF01676 Metalloenzyme superfamily 7 379 3.6E-42 T 14-10-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 DB29_00212 3389bfb1ae9c5d222f539b2c384bd4f9 394 PIRSF PIRSF001491 4 392 2.7E-164 T 14-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 DB29_00212 3389bfb1ae9c5d222f539b2c384bd4f9 394 Gene3D G3DSA:3.40.720.10 7 388 5.8E-172 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 DB29_00643 4440b492ac3bd3d9b10147a8ba56b368 477 Pfam PF07690 Major Facilitator Superfamily 20 409 4.0E-56 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DB29_00643 4440b492ac3bd3d9b10147a8ba56b368 477 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 16 427 1.7E-111 T 14-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 DB29_00643 4440b492ac3bd3d9b10147a8ba56b368 477 SUPERFAMILY SSF103473 16 461 4.32E-71 T 14-10-2018 IPR036259 MFS transporter superfamily DB29_00643 4440b492ac3bd3d9b10147a8ba56b368 477 Gene3D G3DSA:1.20.1250.20 259 463 5.1E-27 T 14-10-2018 DB29_00643 4440b492ac3bd3d9b10147a8ba56b368 477 Gene3D G3DSA:1.20.1720.10 16 204 7.4E-51 T 14-10-2018 DB29_00293 c8c5ba1e913e86d16b15279fe3f1f9ba 384 Pfam PF07690 Major Facilitator Superfamily 10 342 2.9E-24 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DB29_00293 c8c5ba1e913e86d16b15279fe3f1f9ba 384 Gene3D G3DSA:1.20.1250.20 2 374 2.9E-31 T 14-10-2018 DB29_00293 c8c5ba1e913e86d16b15279fe3f1f9ba 384 SUPERFAMILY SSF103473 8 377 7.46E-34 T 14-10-2018 IPR036259 MFS transporter superfamily DB29_03936 904565bb6899d6d6e96792ac13183e4e 433 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 337 357 - T 14-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 DB29_03936 904565bb6899d6d6e96792ac13183e4e 433 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 18 411 6.1E-124 T 14-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 DB29_03936 904565bb6899d6d6e96792ac13183e4e 433 Pfam PF00860 Permease family 18 390 1.2E-102 T 14-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 DB29_00882 3d6992a71209ff5fdf47e87fd292f5be 302 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 133 164 - T 14-10-2018 IPR020625 Schiff base-forming aldolase, active site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 DB29_00882 3d6992a71209ff5fdf47e87fd292f5be 302 PRINTS PR00146 Dihydrodipicolinate synthase signature 71 89 1.6E-15 T 14-10-2018 IPR002220 DapA-like GO:0016829 DB29_00882 3d6992a71209ff5fdf47e87fd292f5be 302 PRINTS PR00146 Dihydrodipicolinate synthase signature 128 145 1.6E-15 T 14-10-2018 IPR002220 DapA-like GO:0016829 DB29_00882 3d6992a71209ff5fdf47e87fd292f5be 302 PRINTS PR00146 Dihydrodipicolinate synthase signature 35 56 1.6E-15 T 14-10-2018 IPR002220 DapA-like GO:0016829 DB29_00882 3d6992a71209ff5fdf47e87fd292f5be 302 PRINTS PR00146 Dihydrodipicolinate synthase signature 103 119 1.6E-15 T 14-10-2018 IPR002220 DapA-like GO:0016829 DB29_00882 3d6992a71209ff5fdf47e87fd292f5be 302 Gene3D G3DSA:3.20.20.70 1 296 2.2E-76 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DB29_00882 3d6992a71209ff5fdf47e87fd292f5be 302 SMART SM01130 1 296 9.3E-68 T 14-10-2018 IPR002220 DapA-like GO:0016829 DB29_00882 3d6992a71209ff5fdf47e87fd292f5be 302 Pfam PF00701 Dihydrodipicolinate synthetase family 2 293 2.8E-63 T 14-10-2018 IPR002220 DapA-like GO:0016829 DB29_00882 3d6992a71209ff5fdf47e87fd292f5be 302 SUPERFAMILY SSF51569 2 295 5.13E-68 T 14-10-2018 DB29_00882 3d6992a71209ff5fdf47e87fd292f5be 302 PIRSF PIRSF001365 2 302 1.9E-64 T 14-10-2018 IPR002220 DapA-like GO:0016829 DB29_00345 0f56fd13dab9add5faecc5b62627ab73 248 Gene3D G3DSA:3.40.1280.10 72 248 3.0E-60 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal DB29_00345 0f56fd13dab9add5faecc5b62627ab73 248 SUPERFAMILY SSF88697 1 68 1.54E-15 T 14-10-2018 IPR015947 PUA-like superfamily DB29_00345 0f56fd13dab9add5faecc5b62627ab73 248 Pfam PF04452 RNA methyltransferase 16 244 5.4E-70 T 14-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 DB29_00345 0f56fd13dab9add5faecc5b62627ab73 248 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 4 247 1.1E-62 T 14-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 DB29_00345 0f56fd13dab9add5faecc5b62627ab73 248 SUPERFAMILY SSF75217 72 247 5.23E-52 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases DB29_00345 0f56fd13dab9add5faecc5b62627ab73 248 Gene3D G3DSA:2.40.240.20 1 70 9.0E-21 T 14-10-2018 DB29_00345 0f56fd13dab9add5faecc5b62627ab73 248 PIRSF PIRSF015601 1 248 5.9E-63 T 14-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 DB29_01614 345fe160323a0e6a0ea1ddbe51316fb5 104 Pfam PF03692 Putative zinc- or iron-chelating domain 2 67 4.3E-8 T 14-10-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein DB29_03193 af96cd22fb79125ecc5010d5813fd3c3 132 TIGRFAM TIGR01518 g3p_cytidyltrns: glycerol-3-phosphate cytidylyltransferase 4 126 2.8E-64 T 14-10-2018 IPR006409 Glycerol-3-phosphate cytidylyltransferase GO:0005737|GO:0019350|GO:0046872|GO:0047348 KEGG: 00564+2.7.7.39|MetaCyc: PWY-7815|MetaCyc: PWY-7816|MetaCyc: PWY-7819 DB29_03193 af96cd22fb79125ecc5010d5813fd3c3 132 Pfam PF01467 Cytidylyltransferase-like 5 123 8.1E-24 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 DB29_03193 af96cd22fb79125ecc5010d5813fd3c3 132 Gene3D G3DSA:3.40.50.620 1 127 2.7E-43 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DB29_03193 af96cd22fb79125ecc5010d5813fd3c3 132 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 4 68 6.0E-21 T 14-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 DB29_03193 af96cd22fb79125ecc5010d5813fd3c3 132 SUPERFAMILY SSF52374 2 124 5.9E-35 T 14-10-2018 DB29_02635 968cfb68f18a32de125506a674650b4d 249 SMART SM00448 13 127 3.5E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DB29_02635 968cfb68f18a32de125506a674650b4d 249 Pfam PF00072 Response regulator receiver domain 15 126 1.2E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DB29_02635 968cfb68f18a32de125506a674650b4d 249 SUPERFAMILY SSF52172 11 141 5.83E-33 T 14-10-2018 IPR011006 CheY-like superfamily DB29_02635 968cfb68f18a32de125506a674650b4d 249 SUPERFAMILY SSF46689 198 246 4.93E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DB29_02635 968cfb68f18a32de125506a674650b4d 249 SUPERFAMILY SSF46689 145 195 2.6E-8 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DB29_02635 968cfb68f18a32de125506a674650b4d 249 Gene3D G3DSA:3.40.50.2300 11 143 2.7E-32 T 14-10-2018 DB29_02635 968cfb68f18a32de125506a674650b4d 249 Gene3D G3DSA:1.10.10.60 194 247 1.7E-17 T 14-10-2018 DB29_02635 968cfb68f18a32de125506a674650b4d 249 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 198 240 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 DB29_02635 968cfb68f18a32de125506a674650b4d 249 Gene3D G3DSA:1.10.10.60 144 193 2.2E-19 T 14-10-2018 DB29_02635 968cfb68f18a32de125506a674650b4d 249 SMART SM00342 161 244 1.4E-24 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DB29_02635 968cfb68f18a32de125506a674650b4d 249 Pfam PF12833 Helix-turn-helix domain 168 246 5.9E-20 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DB29_00091 72bc708bf4c937d0fa4200bf19fd04f7 358 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 13 348 2.5E-112 T 14-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 DB29_00091 72bc708bf4c937d0fa4200bf19fd04f7 358 Gene3D G3DSA:1.20.1090.10 169 353 2.1E-53 T 14-10-2018 DB29_00091 72bc708bf4c937d0fa4200bf19fd04f7 358 PIRSF PIRSF001455 3 354 7.3E-102 T 14-10-2018 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 DB29_00091 72bc708bf4c937d0fa4200bf19fd04f7 358 Pfam PF01761 3-dehydroquinate synthase 64 320 1.2E-96 T 14-10-2018 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 DB29_00091 72bc708bf4c937d0fa4200bf19fd04f7 358 Gene3D G3DSA:3.40.50.1970 1 168 4.5E-59 T 14-10-2018 DB29_00091 72bc708bf4c937d0fa4200bf19fd04f7 358 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 1 355 61.214 T 14-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 DB29_00091 72bc708bf4c937d0fa4200bf19fd04f7 358 SUPERFAMILY SSF56796 1 351 1.7E-98 T 14-10-2018 DB29_03321 b7d59f6659f538b8f4dc692ad3cd978f 263 TIGRFAM TIGR01978 sufC: FeS assembly ATPase SufC 6 246 2.6E-114 T 14-10-2018 IPR010230 FeS cluster assembly SUF system, ATPase SufC GO:0005524 DB29_03321 b7d59f6659f538b8f4dc692ad3cd978f 263 Gene3D G3DSA:3.40.50.300 5 250 4.9E-57 T 14-10-2018 DB29_03321 b7d59f6659f538b8f4dc692ad3cd978f 263 SUPERFAMILY SSF52540 5 231 8.05E-45 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_03321 b7d59f6659f538b8f4dc692ad3cd978f 263 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB29_03321 b7d59f6659f538b8f4dc692ad3cd978f 263 SMART SM00382 30 225 5.8E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_03321 b7d59f6659f538b8f4dc692ad3cd978f 263 Pfam PF00005 ABC transporter 21 173 1.6E-22 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB29_03744 01e4d81d65553ca2d7027588e27cd6b9 301 Pfam PF00849 RNA pseudouridylate synthase 90 240 6.8E-28 T 14-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 DB29_03744 01e4d81d65553ca2d7027588e27cd6b9 301 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 18 294 1.9E-66 T 14-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 DB29_03744 01e4d81d65553ca2d7027588e27cd6b9 301 SUPERFAMILY SSF55120 80 295 2.72E-62 T 14-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 DB29_03744 01e4d81d65553ca2d7027588e27cd6b9 301 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 133 147 - T 14-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 DB29_03744 01e4d81d65553ca2d7027588e27cd6b9 301 Gene3D G3DSA:3.30.2350.10 83 299 1.7E-60 T 14-10-2018 DB29_02858 a7d595616b9e30a510f528389063a2c4 285 Gene3D G3DSA:3.60.15.10 12 274 1.0E-42 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DB29_02858 a7d595616b9e30a510f528389063a2c4 285 SMART SM00849 40 252 2.7E-31 T 14-10-2018 IPR001279 Metallo-beta-lactamase DB29_02858 a7d595616b9e30a510f528389063a2c4 285 SUPERFAMILY SSF56281 27 272 7.99E-47 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DB29_02858 a7d595616b9e30a510f528389063a2c4 285 Pfam PF00753 Metallo-beta-lactamase superfamily 40 252 2.1E-33 T 14-10-2018 IPR001279 Metallo-beta-lactamase DB29_00979 da67b868b65ab3ca34aabc33f7baacdb 583 Pfam PF00005 ABC transporter 355 502 1.1E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB29_00979 da67b868b65ab3ca34aabc33f7baacdb 583 SUPERFAMILY SSF52540 334 574 2.88E-79 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_00979 da67b868b65ab3ca34aabc33f7baacdb 583 Gene3D G3DSA:3.40.50.300 334 582 1.0E-83 T 14-10-2018 DB29_00979 da67b868b65ab3ca34aabc33f7baacdb 583 SUPERFAMILY SSF90123 6 319 2.22E-69 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DB29_00979 da67b868b65ab3ca34aabc33f7baacdb 583 SMART SM00382 364 550 2.5E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_00979 da67b868b65ab3ca34aabc33f7baacdb 583 Gene3D G3DSA:1.20.1560.10 2 319 3.7E-75 T 14-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 DB29_00979 da67b868b65ab3ca34aabc33f7baacdb 583 ProSitePatterns PS00211 ABC transporters family signature. 476 490 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB29_00979 da67b868b65ab3ca34aabc33f7baacdb 583 Pfam PF00664 ABC transporter transmembrane region 21 292 4.4E-44 T 14-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 DB29_03104 4281112798b72d92c123d9cac3d1dd71 79 PRINTS PR00354 7Fe ferredoxin signature 19 29 7.7E-13 T 14-10-2018 IPR000813 7Fe ferredoxin GO:0009055 DB29_03104 4281112798b72d92c123d9cac3d1dd71 79 PRINTS PR00354 7Fe ferredoxin signature 35 52 7.7E-13 T 14-10-2018 IPR000813 7Fe ferredoxin GO:0009055 DB29_03104 4281112798b72d92c123d9cac3d1dd71 79 PRINTS PR00354 7Fe ferredoxin signature 9 19 7.7E-13 T 14-10-2018 IPR000813 7Fe ferredoxin GO:0009055 DB29_03104 4281112798b72d92c123d9cac3d1dd71 79 SUPERFAMILY SSF54862 3 63 3.14E-18 T 14-10-2018 DB29_03104 4281112798b72d92c123d9cac3d1dd71 79 Pfam PF00037 4Fe-4S binding domain 34 55 5.3E-8 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DB29_03104 4281112798b72d92c123d9cac3d1dd71 79 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 40 51 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DB29_03104 4281112798b72d92c123d9cac3d1dd71 79 Gene3D G3DSA:3.30.70.20 2 79 6.3E-27 T 14-10-2018 DB29_00400 26df9f983544714fb2ed8012680ca2e9 47 SUPERFAMILY SSF54747 3 40 2.09E-6 T 14-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily DB29_00400 26df9f983544714fb2ed8012680ca2e9 47 Gene3D G3DSA:3.30.1550.10 2 44 9.8E-8 T 14-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily DB29_00400 26df9f983544714fb2ed8012680ca2e9 47 Pfam PF03946 Ribosomal protein L11, N-terminal domain 11 40 2.4E-5 T 14-10-2018 IPR020784 Ribosomal protein L11, N-terminal DB29_03363 112067b5948bf5595026ecc9ea1a6e2c 79 Pfam PF01106 NifU-like domain 11 76 1.8E-28 T 14-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 DB29_03363 112067b5948bf5595026ecc9ea1a6e2c 79 Gene3D G3DSA:3.30.300.130 1 79 5.1E-33 T 14-10-2018 IPR034904 Fe-S cluster assembly domain superfamily DB29_03363 112067b5948bf5595026ecc9ea1a6e2c 79 SUPERFAMILY SSF117916 4 78 2.75E-27 T 14-10-2018 IPR034904 Fe-S cluster assembly domain superfamily DB29_03363 112067b5948bf5595026ecc9ea1a6e2c 79 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 15 78 3.0E-29 T 14-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 DB29_04306 352f1594edf08dfc377e77341ebbaf99 570 Pfam PF05598 Transposase domain (DUF772) 55 122 7.6E-16 T 14-10-2018 IPR008490 Transposase InsH, N-terminal DB29_04306 352f1594edf08dfc377e77341ebbaf99 570 Pfam PF13751 Transposase DDE domain 405 528 2.4E-31 T 14-10-2018 IPR025668 Transposase DDE domain DB29_03302 aa184703ede3f0e634036ca101dcda4c 204 Pfam PF01674 Lipase (class 2) 38 137 2.2E-11 T 14-10-2018 IPR002918 Lipase EstA/Esterase EstB GO:0016787 KEGG: 00561+3.1.1.3|MetaCyc: PWY-6857 DB29_03302 aa184703ede3f0e634036ca101dcda4c 204 SUPERFAMILY SSF53474 38 203 7.95E-23 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DB29_03302 aa184703ede3f0e634036ca101dcda4c 204 Gene3D G3DSA:3.40.50.1820 37 204 1.0E-43 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DB29_03076 2ea99b0dee03f2a8d5a88e30641b98c2 348 Gene3D G3DSA:3.40.190.10 46 313 7.5E-91 T 14-10-2018 DB29_03076 2ea99b0dee03f2a8d5a88e30641b98c2 348 Gene3D G3DSA:3.40.190.10 136 342 7.5E-91 T 14-10-2018 DB29_03076 2ea99b0dee03f2a8d5a88e30641b98c2 348 SUPERFAMILY SSF53850 34 346 5.12E-60 T 14-10-2018 DB29_03076 2ea99b0dee03f2a8d5a88e30641b98c2 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 98 111 7.8E-6 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DB29_03076 2ea99b0dee03f2a8d5a88e30641b98c2 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 82 96 7.8E-6 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DB29_03076 2ea99b0dee03f2a8d5a88e30641b98c2 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 251 270 7.8E-6 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DB29_03076 2ea99b0dee03f2a8d5a88e30641b98c2 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 151 165 7.8E-6 T 14-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 DB29_03076 2ea99b0dee03f2a8d5a88e30641b98c2 348 Pfam PF13343 Bacterial extracellular solute-binding protein 83 332 1.8E-32 T 14-10-2018 DB29_04038 cb482f67740e5fe37d772b5beb0aa60c 185 Gene3D G3DSA:1.10.132.20 12 182 4.0E-71 T 14-10-2018 DB29_04038 cb482f67740e5fe37d772b5beb0aa60c 185 SUPERFAMILY SSF55194 1 185 4.97E-73 T 14-10-2018 IPR036191 RRF superfamily Reactome: R-HSA-5419276 DB29_04038 cb482f67740e5fe37d772b5beb0aa60c 185 Pfam PF01765 Ribosome recycling factor 20 183 2.0E-67 T 14-10-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 DB29_04038 cb482f67740e5fe37d772b5beb0aa60c 185 TIGRFAM TIGR00496 frr: ribosome recycling factor 10 185 3.3E-77 T 14-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 DB29_04038 cb482f67740e5fe37d772b5beb0aa60c 185 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 185 29.035 T 14-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 DB29_04038 cb482f67740e5fe37d772b5beb0aa60c 185 Gene3D G3DSA:3.30.1360.40 31 105 4.0E-71 T 14-10-2018 DB29_03087 2529ca49d1f32a43c7be910a867ace41 165 PIRSF PIRSF019587 1 165 7.0E-85 T 14-10-2018 IPR026038 Putative phosphatidylglycerophosphatase DB29_03087 2529ca49d1f32a43c7be910a867ace41 165 Pfam PF04608 Phosphatidylglycerophosphatase A 19 155 8.7E-21 T 14-10-2018 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 DB29_03087 2529ca49d1f32a43c7be910a867ace41 165 SUPERFAMILY SSF101307 3 157 2.22E-54 T 14-10-2018 IPR036681 PgpA-like superfamily GO:0006629|GO:0008962 DB29_03087 2529ca49d1f32a43c7be910a867ace41 165 Gene3D G3DSA:1.10.3760.10 3 164 4.3E-71 T 14-10-2018 DB29_02759 333dc6e6ce562cfad971980a5138c715 99 SUPERFAMILY SSF52794 4 94 5.23E-20 T 14-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 DB29_02759 333dc6e6ce562cfad971980a5138c715 99 Gene3D G3DSA:3.40.50.2300 5 94 3.5E-20 T 14-10-2018 DB29_02759 333dc6e6ce562cfad971980a5138c715 99 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 7 89 4.4E-13 T 14-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 DB29_02607 2f544a76a2b1629114d537cfc74b12c2 420 SUPERFAMILY SSF103473 14 402 5.75E-49 T 14-10-2018 IPR036259 MFS transporter superfamily DB29_02607 2f544a76a2b1629114d537cfc74b12c2 420 Gene3D G3DSA:1.20.1250.20 11 202 1.1E-16 T 14-10-2018 DB29_02607 2f544a76a2b1629114d537cfc74b12c2 420 Pfam PF07690 Major Facilitator Superfamily 20 268 5.4E-18 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DB29_02607 2f544a76a2b1629114d537cfc74b12c2 420 Gene3D G3DSA:1.20.1250.20 219 415 2.7E-22 T 14-10-2018 DB29_01965 aa62bad1f8c713ed7c693c9acde4a965 185 Pfam PF04893 Yip1 domain 14 171 1.4E-9 T 14-10-2018 IPR006977 Yip1 domain GO:0016020 DB29_03481 4f177c9c0508aa5bb24f2eae3ebb9b07 963 SUPERFAMILY SSF52540 572 860 2.79E-49 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_03481 4f177c9c0508aa5bb24f2eae3ebb9b07 963 Gene3D G3DSA:1.10.10.10 878 945 2.7E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_03481 4f177c9c0508aa5bb24f2eae3ebb9b07 963 Pfam PF09397 Ftsk gamma domain 885 946 1.6E-25 T 14-10-2018 IPR018541 FtsK gamma domain DB29_03481 4f177c9c0508aa5bb24f2eae3ebb9b07 963 Gene3D G3DSA:3.40.50.300 596 874 2.9E-114 T 14-10-2018 DB29_03481 4f177c9c0508aa5bb24f2eae3ebb9b07 963 Gene3D G3DSA:3.30.980.40 492 594 9.3E-36 T 14-10-2018 DB29_03481 4f177c9c0508aa5bb24f2eae3ebb9b07 963 SUPERFAMILY SSF46785 884 950 2.04E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_03481 4f177c9c0508aa5bb24f2eae3ebb9b07 963 SMART SM00843 884 949 4.0E-35 T 14-10-2018 IPR018541 FtsK gamma domain DB29_03481 4f177c9c0508aa5bb24f2eae3ebb9b07 963 Pfam PF01580 FtsK/SpoIIIE family 740 789 2.2E-15 T 14-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 DB29_03481 4f177c9c0508aa5bb24f2eae3ebb9b07 963 Pfam PF01580 FtsK/SpoIIIE family 599 735 8.8E-50 T 14-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 DB29_02967 7e3388c0523585babe0e34e2a220a16e 216 Pfam PF01966 HD domain 31 127 2.2E-8 T 14-10-2018 IPR006674 HD domain DB29_02967 7e3388c0523585babe0e34e2a220a16e 216 SUPERFAMILY SSF109604 10 214 1.62E-70 T 14-10-2018 DB29_02967 7e3388c0523585babe0e34e2a220a16e 216 Gene3D G3DSA:1.20.58.1910 104 216 5.6E-48 T 14-10-2018 DB29_02967 7e3388c0523585babe0e34e2a220a16e 216 Gene3D G3DSA:1.10.472.50 2 103 5.6E-33 T 14-10-2018 DB29_02967 7e3388c0523585babe0e34e2a220a16e 216 SMART SM00471 25 137 9.1E-12 T 14-10-2018 IPR003607 HD/PDEase domain DB29_00864 38893c0bb51872a670dc214cc5cf3495 486 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 6 455 9.0E-121 T 14-10-2018 IPR003846 Uncharacterised protein family UPF0061 DB29_00864 38893c0bb51872a670dc214cc5cf3495 486 Hamap MF_00692 UPF0061 protein YdiU [ydiU]. 5 472 46.033 T 14-10-2018 IPR003846 Uncharacterised protein family UPF0061 DB29_01630 593ca26fb9be535ab3bfcea4fe5e0e24 192 SUPERFAMILY SSF46689 3 68 7.48E-15 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DB29_01630 593ca26fb9be535ab3bfcea4fe5e0e24 192 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 28 51 2.2E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DB29_01630 593ca26fb9be535ab3bfcea4fe5e0e24 192 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 7 20 2.2E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DB29_01630 593ca26fb9be535ab3bfcea4fe5e0e24 192 Pfam PF00440 Bacterial regulatory proteins, tetR family 7 48 3.3E-12 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DB29_01630 593ca26fb9be535ab3bfcea4fe5e0e24 192 SUPERFAMILY SSF48498 76 187 2.87E-11 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily DB29_01630 593ca26fb9be535ab3bfcea4fe5e0e24 192 Gene3D G3DSA:1.10.357.10 1 189 1.7E-50 T 14-10-2018 DB29_02299 ce501d8b2859f1d5ab6ad5afe36312ee 708 Gene3D G3DSA:1.10.3810.10 63 258 2.4E-76 T 14-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DB29_02299 ce501d8b2859f1d5ab6ad5afe36312ee 708 SUPERFAMILY SSF53955 52 257 3.66E-75 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily DB29_02299 ce501d8b2859f1d5ab6ad5afe36312ee 708 SUPERFAMILY SSF56601 218 656 2.18E-114 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like DB29_02299 ce501d8b2859f1d5ab6ad5afe36312ee 708 Pfam PF00905 Penicillin binding protein transpeptidase domain 326 598 6.0E-33 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 DB29_02299 ce501d8b2859f1d5ab6ad5afe36312ee 708 Gene3D G3DSA:3.40.710.10 259 662 2.0E-109 T 14-10-2018 DB29_02299 ce501d8b2859f1d5ab6ad5afe36312ee 708 Pfam PF00912 Transglycosylase 62 236 4.4E-64 T 14-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DB29_02299 ce501d8b2859f1d5ab6ad5afe36312ee 708 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 73 606 2.1E-178 T 14-10-2018 DB29_00930 7d177c98e19af5b99c14eee126c338d8 180 SUPERFAMILY SSF46785 14 163 2.82E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_00930 7d177c98e19af5b99c14eee126c338d8 180 Gene3D G3DSA:1.10.10.10 14 96 2.9E-23 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_00930 7d177c98e19af5b99c14eee126c338d8 180 PIRSF PIRSF006707 1 180 8.5E-56 T 14-10-2018 IPR026282 DNA-binding protein, MJ1563 type DB29_03389 032c57a36495a7124a893640443c3496 276 PIRSF PIRSF035875 1 276 2.3E-76 T 14-10-2018 IPR017039 Virulence factor BrkB DB29_03389 032c57a36495a7124a893640443c3496 276 Pfam PF03631 Virulence factor BrkB 20 270 1.4E-68 T 14-10-2018 IPR017039 Virulence factor BrkB DB29_03389 032c57a36495a7124a893640443c3496 276 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 9 270 2.2E-51 T 14-10-2018 IPR017039 Virulence factor BrkB DB29_03045 7f77f984aa579de2969fdb405e92f71c 118 ProDom PD015842 PTS IIA COMPONENT GLUCITOL/SORBITOL-SPECIFIC SYSTEM ENZYME TRANSFERASE SYSTEM PHOSPHOTRANSFERASE EIIA 6 117 3.0E-58 T 14-10-2018 IPR004716 Phosphotransferase system, glucitol/sorbitol-specific IIA component GO:0005737|GO:0008982|GO:0009401 DB29_03045 7f77f984aa579de2969fdb405e92f71c 118 Gene3D G3DSA:2.40.33.40 1 118 8.5E-34 T 14-10-2018 IPR036665 Phosphotransferase system, glucitol/sorbitol-specific IIA component superfamily GO:0005737|GO:0008982|GO:0009401 DB29_03045 7f77f984aa579de2969fdb405e92f71c 118 SUPERFAMILY SSF141530 1 117 4.32E-35 T 14-10-2018 IPR036665 Phosphotransferase system, glucitol/sorbitol-specific IIA component superfamily GO:0005737|GO:0008982|GO:0009401 DB29_03045 7f77f984aa579de2969fdb405e92f71c 118 Pfam PF03829 PTS system glucitol/sorbitol-specific IIA component 1 115 5.0E-36 T 14-10-2018 IPR004716 Phosphotransferase system, glucitol/sorbitol-specific IIA component GO:0005737|GO:0008982|GO:0009401 DB29_01809 865bc4fedd9dad076078c18cc70973de 255 SUPERFAMILY SSF52540 4 232 1.98E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_01809 865bc4fedd9dad076078c18cc70973de 255 Gene3D G3DSA:3.40.50.300 1 249 2.0E-62 T 14-10-2018 DB29_01809 865bc4fedd9dad076078c18cc70973de 255 SMART SM00382 34 229 2.2E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_01809 865bc4fedd9dad076078c18cc70973de 255 Pfam PF00005 ABC transporter 25 174 7.6E-28 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB29_01747 ff047f7c47aec17fe80b8bb8bf14d3e4 421 Pfam PF01547 Bacterial extracellular solute-binding protein 52 329 2.6E-41 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein DB29_01747 ff047f7c47aec17fe80b8bb8bf14d3e4 421 SUPERFAMILY SSF53850 18 417 3.78E-75 T 14-10-2018 DB29_01747 ff047f7c47aec17fe80b8bb8bf14d3e4 421 Gene3D G3DSA:3.40.190.10 18 416 1.2E-87 T 14-10-2018 DB29_01753 217f9b58cf2fce0bcad25a635c441192 352 Pfam PF05913 Bacterial protein of unknown function (DUF871) 3 350 5.6E-115 T 14-10-2018 IPR008589 Protein of unknown function DUF871, prokaryotic DB29_01753 217f9b58cf2fce0bcad25a635c441192 352 Gene3D G3DSA:2.40.100.10 238 352 4.7E-39 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily DB29_01753 217f9b58cf2fce0bcad25a635c441192 352 Gene3D G3DSA:3.20.20.70 1 237 3.6E-79 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DB29_01753 217f9b58cf2fce0bcad25a635c441192 352 SUPERFAMILY SSF50891 245 350 2.16E-31 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily DB29_01753 217f9b58cf2fce0bcad25a635c441192 352 SUPERFAMILY SSF51445 2 235 7.72E-71 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily DB29_03178 16f3363b95d780a9a3f8f3bf67a03774 611 SUPERFAMILY SSF75005 39 348 6.91E-92 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily DB29_03178 16f3363b95d780a9a3f8f3bf67a03774 611 Pfam PF08244 Glycosyl hydrolases family 32 C terminal 358 505 3.5E-22 T 14-10-2018 IPR013189 Glycosyl hydrolase family 32, C-terminal DB29_03178 16f3363b95d780a9a3f8f3bf67a03774 611 Gene3D G3DSA:2.115.10.20 37 350 1.7E-108 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily DB29_03178 16f3363b95d780a9a3f8f3bf67a03774 611 SUPERFAMILY SSF49899 347 512 6.73E-28 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily DB29_03178 16f3363b95d780a9a3f8f3bf67a03774 611 SMART SM00640 49 472 8.5E-118 T 14-10-2018 IPR001362 Glycoside hydrolase, family 32 GO:0004553|GO:0005975 DB29_03178 16f3363b95d780a9a3f8f3bf67a03774 611 Gene3D G3DSA:2.60.40.1080 520 604 8.0E-8 T 14-10-2018 DB29_03178 16f3363b95d780a9a3f8f3bf67a03774 611 Pfam PF00251 Glycosyl hydrolases family 32 N-terminal domain 49 347 6.8E-85 T 14-10-2018 IPR013148 Glycosyl hydrolase family 32, N-terminal DB29_03178 16f3363b95d780a9a3f8f3bf67a03774 611 Gene3D G3DSA:2.60.120.560 351 509 6.2E-31 T 14-10-2018 DB29_03036 5ffc876e6a8ace1a614ecf5c4c30fdb1 150 SMART SM00347 21 121 1.8E-18 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DB29_03036 5ffc876e6a8ace1a614ecf5c4c30fdb1 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 111 131 6.8E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DB29_03036 5ffc876e6a8ace1a614ecf5c4c30fdb1 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 81 97 6.8E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DB29_03036 5ffc876e6a8ace1a614ecf5c4c30fdb1 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 62 77 6.8E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DB29_03036 5ffc876e6a8ace1a614ecf5c4c30fdb1 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 45 61 6.8E-12 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DB29_03036 5ffc876e6a8ace1a614ecf5c4c30fdb1 150 SUPERFAMILY SSF46785 3 142 6.2E-33 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_03036 5ffc876e6a8ace1a614ecf5c4c30fdb1 150 Pfam PF01047 MarR family 28 85 6.7E-15 T 14-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 DB29_03036 5ffc876e6a8ace1a614ecf5c4c30fdb1 150 Gene3D G3DSA:1.10.10.10 2 145 9.1E-36 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_03036 5ffc876e6a8ace1a614ecf5c4c30fdb1 150 ProSitePatterns PS01117 MarR-type HTH domain signature. 60 94 - T 14-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site DB29_03407 521f4e0d91c31acdeffb1a8519638a33 152 SUPERFAMILY SSF109854 6 140 7.51E-16 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes DB29_03407 521f4e0d91c31acdeffb1a8519638a33 152 Pfam PF12867 DinB superfamily 7 142 1.5E-12 T 14-10-2018 IPR024775 DinB-like domain DB29_03407 521f4e0d91c31acdeffb1a8519638a33 152 Gene3D G3DSA:1.20.120.450 2 149 1.6E-7 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes DB29_01523 f7d5ce29ccc6ce407123e3bfa521ce32 93 Pfam PF10842 Protein of unknown function (DUF2642) 40 87 9.7E-7 T 14-10-2018 IPR020139 Protein of unknown function DUF2642 DB29_04242 5286b5eae60e62c9d4d379012743b121 817 Pfam PF13884 Chaperone of endosialidase 689 745 8.1E-14 T 14-10-2018 IPR030392 Intramolecular chaperone auto-processing domain DB29_04242 5286b5eae60e62c9d4d379012743b121 817 Gene3D G3DSA:1.10.10.10 689 816 1.9E-48 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_01175 c7473bc1f0085dbbe8b595061cfd679d 309 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 4 120 1.2E-25 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 DB29_01175 c7473bc1f0085dbbe8b595061cfd679d 309 SUPERFAMILY SSF51735 3 139 1.48E-39 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_01175 c7473bc1f0085dbbe8b595061cfd679d 309 SUPERFAMILY SSF55347 122 266 1.52E-34 T 14-10-2018 DB29_01175 c7473bc1f0085dbbe8b595061cfd679d 309 Gene3D G3DSA:3.40.50.720 1 119 3.5E-28 T 14-10-2018 DB29_01175 c7473bc1f0085dbbe8b595061cfd679d 309 Gene3D G3DSA:3.30.360.10 120 308 9.7E-45 T 14-10-2018 DB29_02307 7d00daf942aa442709d36b88caf24c71 693 Gene3D G3DSA:1.10.1060.10 243 404 2.9E-9 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 DB29_02307 7d00daf942aa442709d36b88caf24c71 693 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 369 380 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DB29_02307 7d00daf942aa442709d36b88caf24c71 693 SUPERFAMILY SSF46548 239 397 2.09E-20 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 DB29_02307 7d00daf942aa442709d36b88caf24c71 693 Pfam PF13183 4Fe-4S dicluster domain 278 381 1.8E-12 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DB29_02307 7d00daf942aa442709d36b88caf24c71 693 SUPERFAMILY SSF103501 12 242 4.84E-13 T 14-10-2018 IPR036197 NarG-like superfamily DB29_02307 7d00daf942aa442709d36b88caf24c71 693 Pfam PF02754 Cysteine-rich domain 457 540 9.2E-6 T 14-10-2018 IPR004017 Cysteine-rich domain DB29_02307 7d00daf942aa442709d36b88caf24c71 693 Pfam PF02754 Cysteine-rich domain 580 667 2.6E-17 T 14-10-2018 IPR004017 Cysteine-rich domain DB29_00560 3fa33d53e5eab49162fee215031ac585 104 Gene3D G3DSA:3.30.70.100 1 101 1.0E-25 T 14-10-2018 DB29_00560 3fa33d53e5eab49162fee215031ac585 104 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 75 6.4E-18 T 14-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain DB29_00560 3fa33d53e5eab49162fee215031ac585 104 SUPERFAMILY SSF54909 1 97 2.38E-22 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel DB29_01877 7e0eeabadf0bbd0f7557e9daa4962331 133 Gene3D G3DSA:3.30.420.80 4 133 9.2E-55 T 14-10-2018 IPR036967 Ribosomal protein S11 superfamily GO:0003735|GO:0005840|GO:0006412 DB29_01877 7e0eeabadf0bbd0f7557e9daa4962331 133 ProSitePatterns PS00054 Ribosomal protein S11 signature. 101 123 - T 14-10-2018 IPR018102 Ribosomal S11, conserved site DB29_01877 7e0eeabadf0bbd0f7557e9daa4962331 133 Pfam PF00411 Ribosomal protein S11 23 132 1.5E-51 T 14-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 DB29_01877 7e0eeabadf0bbd0f7557e9daa4962331 133 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 14 130 3.7E-60 T 14-10-2018 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 DB29_01877 7e0eeabadf0bbd0f7557e9daa4962331 133 PIRSF PIRSF002131 1 133 1.2E-55 T 14-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 DB29_01877 7e0eeabadf0bbd0f7557e9daa4962331 133 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 2 133 34.5 T 14-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 DB29_01877 7e0eeabadf0bbd0f7557e9daa4962331 133 SUPERFAMILY SSF53137 18 133 2.03E-50 T 14-10-2018 DB29_03454 6c7e27b0d49604364a4a3a885c2aa78e 292 Pfam PF06445 GyrI-like small molecule binding domain 128 287 1.5E-26 T 14-10-2018 IPR029442 GyrI-like small molecule binding domain DB29_03454 6c7e27b0d49604364a4a3a885c2aa78e 292 Gene3D G3DSA:3.20.80.10 128 291 7.0E-38 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily DB29_03454 6c7e27b0d49604364a4a3a885c2aa78e 292 SUPERFAMILY SSF46689 57 114 4.48E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DB29_03454 6c7e27b0d49604364a4a3a885c2aa78e 292 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 58 100 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 DB29_03454 6c7e27b0d49604364a4a3a885c2aa78e 292 Gene3D G3DSA:1.10.10.60 58 116 6.4E-13 T 14-10-2018 DB29_03454 6c7e27b0d49604364a4a3a885c2aa78e 292 Gene3D G3DSA:1.10.10.60 4 57 3.5E-16 T 14-10-2018 DB29_03454 6c7e27b0d49604364a4a3a885c2aa78e 292 Pfam PF12833 Helix-turn-helix domain 28 101 4.2E-17 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DB29_03454 6c7e27b0d49604364a4a3a885c2aa78e 292 SUPERFAMILY SSF46689 7 55 2.2E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DB29_03454 6c7e27b0d49604364a4a3a885c2aa78e 292 SMART SM00342 21 104 5.2E-26 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DB29_03454 6c7e27b0d49604364a4a3a885c2aa78e 292 SMART SM00871 128 288 1.5E-32 T 14-10-2018 IPR010499 Bacterial transcription activator, effector binding DB29_03454 6c7e27b0d49604364a4a3a885c2aa78e 292 SUPERFAMILY SSF55136 128 289 4.71E-29 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily DB29_02077 1d676e542b9f62288b5ddf56253ea6b9 161 SUPERFAMILY SSF50249 2 161 7.88E-54 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DB29_02077 1d676e542b9f62288b5ddf56253ea6b9 161 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 2 161 3.9E-46 T 14-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 DB29_02077 1d676e542b9f62288b5ddf56253ea6b9 161 PIRSF PIRSF002070 2 151 5.9E-39 T 14-10-2018 DB29_02077 1d676e542b9f62288b5ddf56253ea6b9 161 Pfam PF00436 Single-strand binding protein family 2 103 6.9E-36 T 14-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 DB29_02077 1d676e542b9f62288b5ddf56253ea6b9 161 Gene3D G3DSA:2.40.50.140 1 113 5.5E-45 T 14-10-2018 DB29_02077 1d676e542b9f62288b5ddf56253ea6b9 161 Hamap MF_00984 Single-stranded DNA-binding protein. 2 107 36.507 T 14-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 DB29_03293 68ac0436b97c6ee1bc0de2a02a8158c8 248 PIRSF PIRSF017388 1 246 2.3E-88 T 14-10-2018 IPR012354 Esterase/lipase GO:0052689 DB29_03293 68ac0436b97c6ee1bc0de2a02a8158c8 248 SUPERFAMILY SSF53474 8 245 1.9E-38 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DB29_03293 68ac0436b97c6ee1bc0de2a02a8158c8 248 Pfam PF12146 Serine aminopeptidase, S33 16 225 7.7E-20 T 14-10-2018 IPR022742 Serine aminopeptidase, S33 DB29_03293 68ac0436b97c6ee1bc0de2a02a8158c8 248 Gene3D G3DSA:3.40.50.1820 1 246 9.6E-59 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DB29_00085 8429f2f941b8869ebd3bb4196ef1fcd6 399 Gene3D G3DSA:3.40.50.1100 13 209 2.9E-181 T 14-10-2018 DB29_00085 8429f2f941b8869ebd3bb4196ef1fcd6 399 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 84 98 - T 14-10-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 DB29_00085 8429f2f941b8869ebd3bb4196ef1fcd6 399 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 10 391 1.3E-187 T 14-10-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 DB29_00085 8429f2f941b8869ebd3bb4196ef1fcd6 399 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 5 393 51.922 T 14-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 DB29_00085 8429f2f941b8869ebd3bb4196ef1fcd6 399 Gene3D G3DSA:3.40.50.1100 57 386 2.9E-181 T 14-10-2018 DB29_00085 8429f2f941b8869ebd3bb4196ef1fcd6 399 SUPERFAMILY SSF53686 6 390 1.96E-141 T 14-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme DB29_00085 8429f2f941b8869ebd3bb4196ef1fcd6 399 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 55 380 1.3E-45 T 14-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme DB29_00085 8429f2f941b8869ebd3bb4196ef1fcd6 399 PIRSF PIRSF001413 1 399 5.2E-164 T 14-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 DB29_03426 4e2237aa2798e15ac29e613aaa50be2f 328 Pfam PF09084 NMT1/THI5 like 41 248 2.5E-16 T 14-10-2018 IPR015168 SsuA/THI5-like DB29_03426 4e2237aa2798e15ac29e613aaa50be2f 328 SUPERFAMILY SSF53850 26 283 7.72E-30 T 14-10-2018 DB29_03426 4e2237aa2798e15ac29e613aaa50be2f 328 Gene3D G3DSA:3.40.190.10 22 123 1.0E-13 T 14-10-2018 DB29_03426 4e2237aa2798e15ac29e613aaa50be2f 328 Gene3D G3DSA:3.40.190.10 139 325 9.7E-25 T 14-10-2018 DB29_04188 ffbeabb8716bdfab5dd14ab8aba818c6 258 Pfam PF13365 Trypsin-like peptidase domain 98 226 1.0E-25 T 14-10-2018 DB29_04188 ffbeabb8716bdfab5dd14ab8aba818c6 258 SUPERFAMILY SSF50494 80 254 3.78E-41 T 14-10-2018 IPR009003 Peptidase S1, PA clan DB29_04188 ffbeabb8716bdfab5dd14ab8aba818c6 258 PRINTS PR00834 HtrA/DegQ protease family signature 107 119 1.1E-10 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 DB29_04188 ffbeabb8716bdfab5dd14ab8aba818c6 258 PRINTS PR00834 HtrA/DegQ protease family signature 219 236 1.1E-10 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 DB29_04188 ffbeabb8716bdfab5dd14ab8aba818c6 258 PRINTS PR00834 HtrA/DegQ protease family signature 197 214 1.1E-10 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 DB29_04188 ffbeabb8716bdfab5dd14ab8aba818c6 258 PRINTS PR00834 HtrA/DegQ protease family signature 128 148 1.1E-10 T 14-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 DB29_04188 ffbeabb8716bdfab5dd14ab8aba818c6 258 Gene3D G3DSA:2.40.10.10 160 256 5.9E-17 T 14-10-2018 DB29_04188 ffbeabb8716bdfab5dd14ab8aba818c6 258 Gene3D G3DSA:2.40.10.10 86 159 5.9E-21 T 14-10-2018 DB29_01285 1b7efa9efe4d7eaf0bb7d629ee8a42d9 557 Pfam PF01547 Bacterial extracellular solute-binding protein 65 378 2.2E-15 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein DB29_01285 1b7efa9efe4d7eaf0bb7d629ee8a42d9 557 SUPERFAMILY SSF53850 19 551 5.0E-78 T 14-10-2018 DB29_01285 1b7efa9efe4d7eaf0bb7d629ee8a42d9 557 Gene3D G3DSA:3.40.190.10 443 555 8.9E-6 T 14-10-2018 DB29_01285 1b7efa9efe4d7eaf0bb7d629ee8a42d9 557 Gene3D G3DSA:3.40.190.10 180 418 2.2E-49 T 14-10-2018 DB29_03490 224dc20bc5748283059c12229e480f62 569 SUPERFAMILY SSF56801 15 559 1.31E-163 T 14-10-2018 DB29_03490 224dc20bc5748283059c12229e480f62 569 Pfam PF13193 AMP-binding enzyme C-terminal domain 468 546 9.2E-25 T 14-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain DB29_03490 224dc20bc5748283059c12229e480f62 569 Gene3D G3DSA:3.40.50.12780 13 452 1.3E-123 T 14-10-2018 DB29_03490 224dc20bc5748283059c12229e480f62 569 ProSitePatterns PS00455 Putative AMP-binding domain signature. 208 219 - T 14-10-2018 IPR020845 AMP-binding, conserved site DB29_03490 224dc20bc5748283059c12229e480f62 569 Gene3D G3DSA:3.30.300.310 455 558 2.8E-27 T 14-10-2018 DB29_03490 224dc20bc5748283059c12229e480f62 569 Pfam PF00501 AMP-binding enzyme 54 458 6.5E-96 T 14-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 DB29_02871 b0e10103bbbcfa11e499e0d1c73adefe 67 ProSitePatterns PS00684 Small, acid-soluble spore proteins, alpha/beta type, signature 2. 41 55 - T 14-10-2018 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site GO:0003690|GO:0006265 DB29_02871 b0e10103bbbcfa11e499e0d1c73adefe 67 Gene3D G3DSA:1.10.8.910 8 67 5.4E-32 T 14-10-2018 IPR038300 SASP, alpha/beta-type superfamily DB29_02871 b0e10103bbbcfa11e499e0d1c73adefe 67 ProSitePatterns PS00304 Small, acid-soluble spore proteins, alpha/beta type, signature 1. 23 32 - T 14-10-2018 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site GO:0003690|GO:0006265 DB29_02871 b0e10103bbbcfa11e499e0d1c73adefe 67 Pfam PF00269 Small, acid-soluble spore proteins, alpha/beta type 8 62 8.8E-24 T 14-10-2018 IPR001448 Small acid-soluble spore protein, alpha/beta-type GO:0003690|GO:0006265 DB29_01113 5aa4db8549be65dc998e980a551f9820 246 SUPERFAMILY SSF53697 2 209 7.08E-25 T 14-10-2018 DB29_01113 5aa4db8549be65dc998e980a551f9820 246 Pfam PF13580 SIS domain 6 141 1.2E-43 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 DB29_01113 5aa4db8549be65dc998e980a551f9820 246 Hamap MF_01240 UPF0309 protein . 3 246 38.688 T 14-10-2018 IPR022951 Uncharacterised protein family UPF0309 DB29_01113 5aa4db8549be65dc998e980a551f9820 246 Gene3D G3DSA:3.40.50.10490 1 242 1.9E-82 T 14-10-2018 DB29_00231 d91b83cea6b090fb15997241e3d766a6 415 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 11 404 1.0E-156 T 14-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 DB29_00231 d91b83cea6b090fb15997241e3d766a6 415 Gene3D G3DSA:3.40.309.10 224 372 6.9E-160 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 DB29_00231 d91b83cea6b090fb15997241e3d766a6 415 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 321 343 - T 14-10-2018 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 DB29_00231 d91b83cea6b090fb15997241e3d766a6 415 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 3 414 39.403 T 14-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 DB29_00231 d91b83cea6b090fb15997241e3d766a6 415 SUPERFAMILY SSF53720 3 413 1.1E-109 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 DB29_00231 d91b83cea6b090fb15997241e3d766a6 415 Pfam PF00171 Aldehyde dehydrogenase family 5 282 1.0E-14 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 DB29_00231 d91b83cea6b090fb15997241e3d766a6 415 PIRSF PIRSF000151 1 415 6.7E-171 T 14-10-2018 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922 DB29_00231 d91b83cea6b090fb15997241e3d766a6 415 Gene3D G3DSA:3.40.605.10 17 409 6.9E-160 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 DB29_00993 2a06db21134728836e54ddbdd4ee0025 251 SUPERFAMILY SSF100950 74 233 5.37E-30 T 14-10-2018 IPR037171 NagB/RpiA transferase-like DB29_00993 2a06db21134728836e54ddbdd4ee0025 251 SMART SM00420 6 58 2.0E-18 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DB29_00993 2a06db21134728836e54ddbdd4ee0025 251 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 3.3E-5 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DB29_00993 2a06db21134728836e54ddbdd4ee0025 251 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 3.3E-5 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DB29_00993 2a06db21134728836e54ddbdd4ee0025 251 Pfam PF08220 DeoR-like helix-turn-helix domain 6 61 5.2E-17 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DB29_00993 2a06db21134728836e54ddbdd4ee0025 251 SUPERFAMILY SSF46785 5 65 7.49E-12 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_00993 2a06db21134728836e54ddbdd4ee0025 251 Pfam PF00455 DeoR C terminal sensor domain 75 231 6.5E-45 T 14-10-2018 IPR014036 DeoR C-terminal sensor domain DB29_00993 2a06db21134728836e54ddbdd4ee0025 251 SMART SM01134 73 233 2.7E-62 T 14-10-2018 DB29_02145 1b80c99d46b96e5e5873e4745984fba6 396 SUPERFAMILY SSF51905 1 283 1.73E-46 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB29_02145 1b80c99d46b96e5e5873e4745984fba6 396 Pfam PF01266 FAD dependent oxidoreductase 3 390 1.1E-61 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 DB29_00248 d94d1b247452889c6cd2a5b5ff718d6c 137 Gene3D G3DSA:3.10.180.10 4 135 3.5E-29 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DB29_00248 d94d1b247452889c6cd2a5b5ff718d6c 137 SUPERFAMILY SSF54593 4 135 2.6E-20 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DB29_00248 d94d1b247452889c6cd2a5b5ff718d6c 137 Pfam PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 7 119 1.2E-12 T 14-10-2018 DB29_03778 ec389a179a486f5728b2afd1ec92179d 341 Gene3D G3DSA:3.40.50.12110 2 114 5.8E-48 T 14-10-2018 DB29_03778 ec389a179a486f5728b2afd1ec92179d 341 TIGRFAM TIGR04070 photo_TT_lyase: spore photoproduct lyase 4 341 1.2E-156 T 14-10-2018 IPR023897 Spore photoproduct lyase GO:0003913 DB29_03778 ec389a179a486f5728b2afd1ec92179d 341 Gene3D G3DSA:3.80.30.30 115 341 1.2E-88 T 14-10-2018 DB29_00611 6de0209df216f985ca0135031ab016ea 47 Pfam PF06983 3-demethylubiquinone-9 3-methyltransferase 1 37 1.4E-10 T 14-10-2018 IPR028973 PhnB-like DB29_00611 6de0209df216f985ca0135031ab016ea 47 SUPERFAMILY SSF54593 1 37 3.19E-6 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DB29_00611 6de0209df216f985ca0135031ab016ea 47 Gene3D G3DSA:3.10.180.70 1 39 1.6E-11 T 14-10-2018 DB29_01128 b57c809dfcbb37ca70cbe3078fb3215f 63 Pfam PF02416 mttA/Hcf106 family 4 54 7.3E-23 T 14-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 DB29_01128 b57c809dfcbb37ca70cbe3078fb3215f 63 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 62 19.017 T 14-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 DB29_01128 b57c809dfcbb37ca70cbe3078fb3215f 63 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 3 48 6.2E-19 T 14-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 DB29_02855 9d573ef8a318700183c4c001a64a8c10 285 Gene3D G3DSA:3.40.190.100 109 218 1.2E-86 T 14-10-2018 DB29_02855 9d573ef8a318700183c4c001a64a8c10 285 Gene3D G3DSA:3.40.190.10 27 283 1.2E-86 T 14-10-2018 DB29_02855 9d573ef8a318700183c4c001a64a8c10 285 SUPERFAMILY SSF53850 20 285 2.49E-75 T 14-10-2018 DB29_02855 9d573ef8a318700183c4c001a64a8c10 285 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 26 274 9.7E-68 T 14-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 DB29_01291 12671ecc9691a47ba0ee041c5bae3045 228 Pfam PF02665 Nitrate reductase gamma subunit 6 224 2.1E-86 T 14-10-2018 IPR023234 NarG-like domain DB29_01291 12671ecc9691a47ba0ee041c5bae3045 228 Gene3D G3DSA:1.20.950.20 2 217 6.1E-78 T 14-10-2018 DB29_01291 12671ecc9691a47ba0ee041c5bae3045 228 TIGRFAM TIGR00351 narI: respiratory nitrate reductase, gamma subunit 3 225 9.9E-70 T 14-10-2018 IPR003816 Nitrate reductase, gamma subunit GO:0008940|GO:0009325|GO:0055114 DB29_01291 12671ecc9691a47ba0ee041c5bae3045 228 SUPERFAMILY SSF103501 1 225 3.66E-69 T 14-10-2018 IPR036197 NarG-like superfamily DB29_00597 03497f2123913c4583b7f953a686394c 161 Gene3D G3DSA:3.20.90.20 1 157 9.4E-14 T 14-10-2018 IPR038595 LURP-one-related superfamily DB29_00597 03497f2123913c4583b7f953a686394c 161 Pfam PF04525 LURP-one-related 10 147 3.3E-18 T 14-10-2018 IPR007612 LURP-one-related DB29_00597 03497f2123913c4583b7f953a686394c 161 SUPERFAMILY SSF54518 1 153 6.54E-37 T 14-10-2018 IPR025659 Tubby-like, C-terminal DB29_04016 8dc74d316412aef2c299f9ff24a7e6c7 267 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 3 134 5.2E-40 T 14-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G DB29_04016 8dc74d316412aef2c299f9ff24a7e6c7 267 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 154 248 1.7E-29 T 14-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G DB29_04016 8dc74d316412aef2c299f9ff24a7e6c7 267 SUPERFAMILY SSF117143 92 227 1.07E-34 T 14-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like DB29_04016 8dc74d316412aef2c299f9ff24a7e6c7 267 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 188 265 2.5E-23 T 14-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain DB29_04016 8dc74d316412aef2c299f9ff24a7e6c7 267 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 14-10-2018 IPR019776 Flagellar basal body rod protein, conserved site DB29_04016 8dc74d316412aef2c299f9ff24a7e6c7 267 TIGRFAM TIGR02490 flgF: flagellar basal-body rod protein FlgF 5 246 2.9E-54 T 14-10-2018 IPR012836 Flagellar basal-body rod FlgF GO:0030694|GO:0071973 DB29_04016 8dc74d316412aef2c299f9ff24a7e6c7 267 Pfam PF00460 Flagella basal body rod protein 5 35 3.3E-11 T 14-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 DB29_03016 1d61586662c49cf169cb77ba459697d9 239 Pfam PF00106 short chain dehydrogenase 5 192 1.2E-35 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_03016 1d61586662c49cf169cb77ba459697d9 239 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 135 163 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 DB29_03016 1d61586662c49cf169cb77ba459697d9 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 122 138 1.2E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_03016 1d61586662c49cf169cb77ba459697d9 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 171 188 1.2E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_03016 1d61586662c49cf169cb77ba459697d9 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 1.2E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_03016 1d61586662c49cf169cb77ba459697d9 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 1.2E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_03016 1d61586662c49cf169cb77ba459697d9 239 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 148 167 1.2E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_03016 1d61586662c49cf169cb77ba459697d9 239 Gene3D G3DSA:3.40.50.720 2 238 1.3E-42 T 14-10-2018 DB29_03016 1d61586662c49cf169cb77ba459697d9 239 SUPERFAMILY SSF51735 5 233 5.63E-43 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_02959 bd916918044c1b797840db20cdcd83b6 286 Pfam PF00069 Protein kinase domain 57 244 1.8E-8 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 DB29_02959 bd916918044c1b797840db20cdcd83b6 286 SUPERFAMILY SSF56112 59 281 3.19E-19 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily DB29_02959 bd916918044c1b797840db20cdcd83b6 286 Gene3D G3DSA:1.10.510.10 70 283 3.4E-17 T 14-10-2018 DB29_01012 8dcf30a7d6b8083cc7926d0681ea7fa1 90 Gene3D G3DSA:1.20.5.170 14 62 9.8E-8 T 14-10-2018 DB29_03286 add7124408b0afeaa1deeabf141d1af2 324 SUPERFAMILY SSF53850 105 284 6.15E-9 T 14-10-2018 DB29_03286 add7124408b0afeaa1deeabf141d1af2 324 Gene3D G3DSA:3.40.190.10 129 250 5.3E-70 T 14-10-2018 DB29_03286 add7124408b0afeaa1deeabf141d1af2 324 Gene3D G3DSA:3.40.190.150 34 313 5.3E-70 T 14-10-2018 DB29_03286 add7124408b0afeaa1deeabf141d1af2 324 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 54 316 1.1E-38 T 14-10-2018 IPR005064 Bordetella uptake gene GO:0030288 DB29_03286 add7124408b0afeaa1deeabf141d1af2 324 PIRSF PIRSF017082 1 320 1.3E-76 T 14-10-2018 IPR005064 Bordetella uptake gene GO:0030288 DB29_00628 2e638128a2cbf9d00bfa27373aa90ba8 388 SUPERFAMILY SSF51338 4 375 5.13E-12 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DB29_00628 2e638128a2cbf9d00bfa27373aa90ba8 388 Gene3D G3DSA:3.20.20.140 58 323 2.5E-111 T 14-10-2018 DB29_00628 2e638128a2cbf9d00bfa27373aa90ba8 388 SUPERFAMILY SSF51556 58 323 2.39E-57 T 14-10-2018 IPR032466 Metal-dependent hydrolase DB29_00628 2e638128a2cbf9d00bfa27373aa90ba8 388 PIRSF PIRSF039004 1 387 4.0E-138 T 14-10-2018 IPR020043 Deacetylase Atu3266-like GO:0019213 DB29_00628 2e638128a2cbf9d00bfa27373aa90ba8 388 Gene3D G3DSA:2.30.40.10 6 370 2.5E-111 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DB29_00628 2e638128a2cbf9d00bfa27373aa90ba8 388 Pfam PF01979 Amidohydrolase family 54 339 4.8E-6 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 DB29_02723 608dbed23cc5d80b18c447b3986fbc82 123 SUPERFAMILY SSF46955 3 113 1.47E-29 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily DB29_02723 608dbed23cc5d80b18c447b3986fbc82 123 Gene3D G3DSA:1.10.1660.10 2 119 2.5E-29 T 14-10-2018 DB29_02723 608dbed23cc5d80b18c447b3986fbc82 123 Pfam PF13411 MerR HTH family regulatory protein 4 71 3.0E-17 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DB29_02723 608dbed23cc5d80b18c447b3986fbc82 123 SMART SM00422 4 73 2.7E-21 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DB29_03527 d2b3f8e6593cad869a2ff8f8095fdb07 410 Pfam PF00390 Malic enzyme, N-terminal domain 16 149 1.6E-28 T 14-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 DB29_03527 d2b3f8e6593cad869a2ff8f8095fdb07 410 PIRSF PIRSF000106 41 408 5.2E-86 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 DB29_03527 d2b3f8e6593cad869a2ff8f8095fdb07 410 Pfam PF03949 Malic enzyme, NAD binding domain 163 384 4.8E-28 T 14-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 DB29_03527 d2b3f8e6593cad869a2ff8f8095fdb07 410 ProSitePatterns PS00331 Malic enzymes signature. 157 173 - T 14-10-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 DB29_03527 d2b3f8e6593cad869a2ff8f8095fdb07 410 SUPERFAMILY SSF51735 161 405 2.56E-85 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_03527 d2b3f8e6593cad869a2ff8f8095fdb07 410 PRINTS PR00072 Malic enzyme signature 277 293 3.4E-8 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 DB29_03527 d2b3f8e6593cad869a2ff8f8095fdb07 410 PRINTS PR00072 Malic enzyme signature 78 100 3.4E-8 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 DB29_03527 d2b3f8e6593cad869a2ff8f8095fdb07 410 PRINTS PR00072 Malic enzyme signature 157 173 3.4E-8 T 14-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 DB29_03527 d2b3f8e6593cad869a2ff8f8095fdb07 410 SMART SM01274 16 149 1.6E-83 T 14-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 DB29_03527 d2b3f8e6593cad869a2ff8f8095fdb07 410 SUPERFAMILY SSF53223 7 159 5.25E-56 T 14-10-2018 DB29_03527 d2b3f8e6593cad869a2ff8f8095fdb07 410 Gene3D G3DSA:3.40.50.720 159 409 2.6E-91 T 14-10-2018 DB29_03527 d2b3f8e6593cad869a2ff8f8095fdb07 410 Gene3D G3DSA:3.40.50.10380 2 158 1.4E-73 T 14-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 DB29_03527 d2b3f8e6593cad869a2ff8f8095fdb07 410 SMART SM00919 161 385 2.0E-138 T 14-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 DB29_02433 05611fdb557eece590b561f8fb05b67a 338 Gene3D G3DSA:2.40.100.10 192 330 1.7E-47 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily DB29_02433 05611fdb557eece590b561f8fb05b67a 338 Pfam PF02626 Carboxyltransferase domain, subdomain A and B 26 303 2.6E-91 T 14-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B DB29_02433 05611fdb557eece590b561f8fb05b67a 338 SMART SM00797 24 320 5.0E-141 T 14-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B DB29_02433 05611fdb557eece590b561f8fb05b67a 338 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 3 323 8.2E-91 T 14-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B DB29_02433 05611fdb557eece590b561f8fb05b67a 338 SUPERFAMILY SSF50891 195 310 6.45E-8 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily DB29_01080 239e5fd941f1c2df0dbdb053bffad085 449 Pfam PF03390 2-hydroxycarboxylate transporter family 34 441 6.5E-152 T 14-10-2018 IPR004679 2-hydroxycarboxylate transporter GO:0008514|GO:0015711|GO:0016021 DB29_01080 239e5fd941f1c2df0dbdb053bffad085 449 PIRSF PIRSF005348 14 448 4.0E-170 T 14-10-2018 IPR004679 2-hydroxycarboxylate transporter GO:0008514|GO:0015711|GO:0016021 DB29_02288 baa838ce53645e9b320812faef81ec4a 428 SUPERFAMILY SSF109604 5 409 1.49E-118 T 14-10-2018 DB29_02288 baa838ce53645e9b320812faef81ec4a 428 Gene3D G3DSA:1.10.3210.10 8 396 1.9E-167 T 14-10-2018 DB29_02288 baa838ce53645e9b320812faef81ec4a 428 Gene3D G3DSA:1.20.1250.30 231 407 1.9E-167 T 14-10-2018 DB29_02288 baa838ce53645e9b320812faef81ec4a 428 Pfam PF01966 HD domain 58 176 1.5E-15 T 14-10-2018 IPR006674 HD domain DB29_02288 baa838ce53645e9b320812faef81ec4a 428 SMART SM00471 54 183 2.3E-13 T 14-10-2018 IPR003607 HD/PDEase domain DB29_02925 36dff2ff648a70351ed249292a4526f1 228 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 1 220 31.1 T 14-10-2018 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 DB29_02925 36dff2ff648a70351ed249292a4526f1 228 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 49 216 3.8E-59 T 14-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 DB29_02925 36dff2ff648a70351ed249292a4526f1 228 SUPERFAMILY SSF75445 126 203 3.14E-23 T 14-10-2018 DB29_02925 36dff2ff648a70351ed249292a4526f1 228 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 4 217 1.0E-75 T 14-10-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-5659996|Reactome: R-HSA-6791461|Reactome: R-HSA-71336 DB29_02925 36dff2ff648a70351ed249292a4526f1 228 Gene3D G3DSA:3.30.70.260 125 200 1.9E-75 T 14-10-2018 DB29_02925 36dff2ff648a70351ed249292a4526f1 228 SUPERFAMILY SSF100950 2 147 2.17E-41 T 14-10-2018 IPR037171 NagB/RpiA transferase-like DB29_02925 36dff2ff648a70351ed249292a4526f1 228 Gene3D G3DSA:3.40.50.1360 5 216 1.9E-75 T 14-10-2018 DB29_02887 1a6076be84f2e92f371602cb14055c36 275 SUPERFAMILY SSF53223 2 118 2.59E-37 T 14-10-2018 DB29_02887 1a6076be84f2e92f371602cb14055c36 275 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 2 117 4.5E-42 T 14-10-2018 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 DB29_02887 1a6076be84f2e92f371602cb14055c36 275 SUPERFAMILY SSF51735 132 273 3.15E-44 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_02887 1a6076be84f2e92f371602cb14055c36 275 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 71 98 2.1E-48 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 DB29_02887 1a6076be84f2e92f371602cb14055c36 275 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 248 266 2.1E-48 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 DB29_02887 1a6076be84f2e92f371602cb14055c36 275 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 231 247 2.1E-48 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 DB29_02887 1a6076be84f2e92f371602cb14055c36 275 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 30 52 2.1E-48 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 DB29_02887 1a6076be84f2e92f371602cb14055c36 275 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 151 171 2.1E-48 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 DB29_02887 1a6076be84f2e92f371602cb14055c36 275 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 106 127 2.1E-48 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 DB29_02887 1a6076be84f2e92f371602cb14055c36 275 Hamap MF_01576 Bifunctional protein FolD [folD]. 1 275 33.937 T 14-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 DB29_02887 1a6076be84f2e92f371602cb14055c36 275 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 134 274 2.7E-57 T 14-10-2018 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0004488 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 DB29_02887 1a6076be84f2e92f371602cb14055c36 275 Gene3D G3DSA:3.40.50.720 3 251 4.7E-101 T 14-10-2018 DB29_02887 1a6076be84f2e92f371602cb14055c36 275 Gene3D G3DSA:3.40.50.10860 5 269 4.7E-101 T 14-10-2018 DB29_03881 07b55c8e75379fe4c47ce9e70604886f 207 Pfam PF00510 Cytochrome c oxidase subunit III 27 203 5.1E-18 T 14-10-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DB29_03881 07b55c8e75379fe4c47ce9e70604886f 207 SUPERFAMILY SSF81452 14 203 3.14E-55 T 14-10-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DB29_03881 07b55c8e75379fe4c47ce9e70604886f 207 Gene3D G3DSA:1.20.120.80 20 204 4.7E-53 T 14-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DB29_03155 5f2be3b59989a232a840b387c3e4bcca 242 Gene3D G3DSA:3.60.15.10 2 241 1.8E-28 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DB29_03155 5f2be3b59989a232a840b387c3e4bcca 242 SUPERFAMILY SSF56281 3 231 2.17E-30 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DB29_03155 5f2be3b59989a232a840b387c3e4bcca 242 Pfam PF12706 Beta-lactamase superfamily domain 29 218 1.2E-15 T 14-10-2018 IPR001279 Metallo-beta-lactamase DB29_03155 5f2be3b59989a232a840b387c3e4bcca 242 SMART SM00849 16 218 5.2E-4 T 14-10-2018 IPR001279 Metallo-beta-lactamase DB29_03066 07dff047059dbc44197e23d11477bbce 290 SUPERFAMILY SSF161098 18 290 7.2E-65 T 14-10-2018 IPR035906 MetI-like superfamily DB29_03066 07dff047059dbc44197e23d11477bbce 290 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 102 278 9.0E-18 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DB29_03066 07dff047059dbc44197e23d11477bbce 290 Gene3D G3DSA:1.10.3720.10 12 280 3.9E-58 T 14-10-2018 IPR035906 MetI-like superfamily DB29_03827 b9e2501d62f7a1efbaa05bb9e1ed98b2 180 Pfam PF13302 Acetyltransferase (GNAT) domain 11 150 2.3E-30 T 14-10-2018 IPR000182 GNAT domain DB29_03827 b9e2501d62f7a1efbaa05bb9e1ed98b2 180 Gene3D G3DSA:3.40.630.30 2 180 1.5E-46 T 14-10-2018 DB29_03827 b9e2501d62f7a1efbaa05bb9e1ed98b2 180 SUPERFAMILY SSF55729 6 176 7.28E-48 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase DB29_01451 085f32bf2913a569107ff2a4c16211ea 510 Pfam PF07905 Purine catabolism regulatory protein-like family 6 118 8.9E-29 T 14-10-2018 IPR012914 Purine catabolism PurC-like domain DB29_01451 085f32bf2913a569107ff2a4c16211ea 510 Gene3D G3DSA:1.10.10.2840 376 510 7.1E-19 T 14-10-2018 DB29_01451 085f32bf2913a569107ff2a4c16211ea 510 SUPERFAMILY SSF46689 455 484 1.88E-5 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DB29_01451 085f32bf2913a569107ff2a4c16211ea 510 Pfam PF13556 PucR C-terminal helix-turn-helix domain 450 507 1.8E-21 T 14-10-2018 IPR025736 PucR C-terminal helix-turn-helix domain DB29_02172 30de854cbbe59a4b42f1d1927e6a4ecb 381 Gene3D G3DSA:1.20.1250.20 2 192 5.4E-18 T 14-10-2018 DB29_02172 30de854cbbe59a4b42f1d1927e6a4ecb 381 Pfam PF07690 Major Facilitator Superfamily 203 371 1.7E-9 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DB29_02172 30de854cbbe59a4b42f1d1927e6a4ecb 381 Pfam PF07690 Major Facilitator Superfamily 19 177 2.5E-14 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DB29_02172 30de854cbbe59a4b42f1d1927e6a4ecb 381 Gene3D G3DSA:1.20.1250.20 193 379 8.8E-19 T 14-10-2018 DB29_02172 30de854cbbe59a4b42f1d1927e6a4ecb 381 SUPERFAMILY SSF103473 4 378 6.28E-46 T 14-10-2018 IPR036259 MFS transporter superfamily DB29_03434 191a740b58890051cc1a4bf49d415029 194 Gene3D G3DSA:3.40.50.150 1 193 2.7E-66 T 14-10-2018 DB29_03434 191a740b58890051cc1a4bf49d415029 194 SUPERFAMILY SSF53335 13 159 8.97E-25 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DB29_03434 191a740b58890051cc1a4bf49d415029 194 Pfam PF06962 Putative rRNA methylase 48 187 4.2E-48 T 14-10-2018 IPR010719 Putative rRNA methylase DB29_03711 1a3f8ffd67e1d04ec093ddd47b176d68 413 PIRSF PIRSF000447 1 413 1.1E-184 T 14-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 DB29_03711 1a3f8ffd67e1d04ec093ddd47b176d68 413 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 4 409 2.6E-198 T 14-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 DB29_03711 1a3f8ffd67e1d04ec093ddd47b176d68 413 SUPERFAMILY SSF53901 213 411 4.09E-76 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 DB29_03711 1a3f8ffd67e1d04ec093ddd47b176d68 413 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 254 368 5.1E-41 T 14-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal DB29_03711 1a3f8ffd67e1d04ec093ddd47b176d68 413 SUPERFAMILY SSF53901 4 251 1.05E-74 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 DB29_03711 1a3f8ffd67e1d04ec093ddd47b176d68 413 Gene3D G3DSA:3.40.47.10 1 254 1.0E-99 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 DB29_03711 1a3f8ffd67e1d04ec093ddd47b176d68 413 SMART SM00825 Beta-ketoacyl synthase 6 413 5.7E-16 T 14-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain DB29_03711 1a3f8ffd67e1d04ec093ddd47b176d68 413 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 4 246 2.3E-58 T 14-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal DB29_03711 1a3f8ffd67e1d04ec093ddd47b176d68 413 Gene3D G3DSA:3.40.47.10 256 400 3.8E-58 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 DB29_02478 cd59edd8ea1d0568b65082bcd26a38c2 171 Gene3D G3DSA:1.20.1260.10 1 156 9.9E-58 T 14-10-2018 IPR012347 Ferritin-like DB29_02478 cd59edd8ea1d0568b65082bcd26a38c2 171 Pfam PF11553 Protein of unknown function (DUF3231) 3 166 2.9E-36 T 14-10-2018 IPR021617 Protein of unknown function DUF3231 DB29_00506 e75d274b0e195ec62c40ab44f9269713 118 Gene3D G3DSA:1.20.1500.10 1 111 2.0E-33 T 14-10-2018 IPR023378 YheA/YmcA-like domain superfamily DB29_00506 e75d274b0e195ec62c40ab44f9269713 118 Pfam PF06133 Control of competence regulator ComK, YlbF/YmcA 5 107 2.3E-23 T 14-10-2018 IPR010368 Control of competence regulator ComK, YlbF/YmcA DB29_00506 e75d274b0e195ec62c40ab44f9269713 118 SUPERFAMILY SSF158622 3 112 2.88E-34 T 14-10-2018 IPR023378 YheA/YmcA-like domain superfamily DB29_00506 e75d274b0e195ec62c40ab44f9269713 118 Hamap MF_01526 UPF0342 protein . 1 112 18.286 T 14-10-2018 IPR010368 Control of competence regulator ComK, YlbF/YmcA DB29_03935 cca82a22c0943ce85d1e05785fc62e41 197 Hamap MF_01219 Bifunctional protein PyrR [pyrR]. 23 197 37.78 T 14-10-2018 IPR023050 Bifunctional protein PyrR KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 DB29_03935 cca82a22c0943ce85d1e05785fc62e41 197 SUPERFAMILY SSF53271 23 191 2.49E-43 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like DB29_03935 cca82a22c0943ce85d1e05785fc62e41 197 Pfam PF00156 Phosphoribosyl transferase domain 25 170 6.4E-23 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 DB29_03935 cca82a22c0943ce85d1e05785fc62e41 197 Gene3D G3DSA:3.40.50.2020 17 197 1.7E-60 T 14-10-2018 DB29_00184 1aa4f1042c5d6df1e5d02e78d1086a04 486 Gene3D G3DSA:3.40.309.10 254 453 3.7E-149 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 DB29_00184 1aa4f1042c5d6df1e5d02e78d1086a04 486 Hamap MF_01670 Malonate-semialdehyde dehydrogenase [iolA]. 3 484 67.224 T 14-10-2018 IPR023510 Methylmalonate-semialdehyde dehydrogenase, Gram-positive bacteria GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00640+1.2.1.27|MetaCyc: PWY-5642 DB29_00184 1aa4f1042c5d6df1e5d02e78d1086a04 486 Pfam PF00171 Aldehyde dehydrogenase family 17 480 5.8E-146 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 DB29_00184 1aa4f1042c5d6df1e5d02e78d1086a04 486 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 279 290 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 DB29_00184 1aa4f1042c5d6df1e5d02e78d1086a04 486 Gene3D G3DSA:3.40.605.10 28 461 3.7E-149 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 DB29_00184 1aa4f1042c5d6df1e5d02e78d1086a04 486 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 9 484 2.2E-180 T 14-10-2018 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00640+1.2.1.27|MetaCyc: PWY-5642|Reactome: R-HSA-70895 DB29_00184 1aa4f1042c5d6df1e5d02e78d1086a04 486 SUPERFAMILY SSF53720 4 485 7.72E-147 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 DB29_04135 7cee27837df4e217d81a3201a0525e0e 140 PIRSF PIRSF003230 1 136 2.0E-30 T 14-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 DB29_04135 7cee27837df4e217d81a3201a0525e0e 140 Gene3D G3DSA:3.10.129.10 2 139 4.7E-35 T 14-10-2018 DB29_04135 7cee27837df4e217d81a3201a0525e0e 140 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 12 123 2.1E-29 T 14-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 DB29_04135 7cee27837df4e217d81a3201a0525e0e 140 Pfam PF13279 Thioesterase-like superfamily 14 127 1.7E-10 T 14-10-2018 DB29_04135 7cee27837df4e217d81a3201a0525e0e 140 SUPERFAMILY SSF54637 5 134 1.39E-37 T 14-10-2018 IPR029069 HotDog domain superfamily DB29_00516 371aac536ffe5f1d40e7fdc109fdcc23 262 Pfam PF00378 Enoyl-CoA hydratase/isomerase 13 261 3.5E-65 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 DB29_00516 371aac536ffe5f1d40e7fdc109fdcc23 262 Gene3D G3DSA:3.90.226.10 2 203 1.1E-68 T 14-10-2018 DB29_00516 371aac536ffe5f1d40e7fdc109fdcc23 262 SUPERFAMILY SSF52096 7 261 3.02E-84 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily DB29_00516 371aac536ffe5f1d40e7fdc109fdcc23 262 Gene3D G3DSA:1.10.12.10 204 262 3.2E-24 T 14-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal DB29_00308 8d4caf79fe4de51e73704852e3208ea4 163 Gene3D G3DSA:2.30.30.840 1 63 1.2E-22 T 14-10-2018 DB29_00308 8d4caf79fe4de51e73704852e3208ea4 163 Gene3D G3DSA:1.20.58.1290 64 158 1.5E-12 T 14-10-2018 DB29_00308 8d4caf79fe4de51e73704852e3208ea4 163 SMART SM01058 1 110 6.1E-22 T 14-10-2018 IPR003711 CarD-like/TRCF domain DB29_00308 8d4caf79fe4de51e73704852e3208ea4 163 Pfam PF02559 CarD-like/TRCF domain 2 108 4.7E-14 T 14-10-2018 IPR003711 CarD-like/TRCF domain DB29_00308 8d4caf79fe4de51e73704852e3208ea4 163 SUPERFAMILY SSF141259 1 64 2.35E-11 T 14-10-2018 IPR036101 CarD-like/TRCF domain superfamily DB29_03419 ef539babd117a70e2eef8297d8f4898b 391 Gene3D G3DSA:3.90.1150.10 12 382 2.4E-149 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DB29_03419 ef539babd117a70e2eef8297d8f4898b 391 SUPERFAMILY SSF53383 3 387 1.32E-102 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DB29_03419 ef539babd117a70e2eef8297d8f4898b 391 TIGRFAM TIGR04350 C_S_lyase_PatB: putative C-S lyase 4 386 3.6E-150 T 14-10-2018 IPR027619 Putative C-S lyase KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8 DB29_03419 ef539babd117a70e2eef8297d8f4898b 391 Gene3D G3DSA:3.40.640.10 67 290 2.4E-149 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DB29_03419 ef539babd117a70e2eef8297d8f4898b 391 Pfam PF00155 Aminotransferase class I and II 52 382 4.3E-40 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 DB29_01335 664b661c3eb0e92c7445c951fd58565f 97 Pfam PF06013 Proteins of 100 residues with WXG 5 89 3.8E-23 T 14-10-2018 IPR010310 Type VII secretion system ESAT-6-like DB29_01335 664b661c3eb0e92c7445c951fd58565f 97 TIGRFAM TIGR03930 WXG100_ESAT6: WXG100 family type VII secretion target 5 92 5.1E-26 T 14-10-2018 IPR010310 Type VII secretion system ESAT-6-like DB29_01335 664b661c3eb0e92c7445c951fd58565f 97 Gene3D G3DSA:1.10.287.1060 1 97 1.5E-25 T 14-10-2018 DB29_01335 664b661c3eb0e92c7445c951fd58565f 97 SUPERFAMILY SSF140453 4 97 4.97E-25 T 14-10-2018 IPR036689 ESAT-6-like superfamily DB29_04059 e0517dbc166bd5ea56e292241adefa27 78 Pfam PF05239 PRC-barrel domain 3 77 6.0E-15 T 14-10-2018 IPR027275 PRC-barrel domain DB29_04059 e0517dbc166bd5ea56e292241adefa27 78 TIGRFAM TIGR02888 spore_YlmC_YmxH: sporulation protein, YlmC/YmxH family 4 77 6.8E-25 T 14-10-2018 IPR014238 Sporulation protein YlmC/YmxH DB29_04059 e0517dbc166bd5ea56e292241adefa27 78 Gene3D G3DSA:2.30.30.240 4 78 1.5E-7 T 14-10-2018 DB29_04059 e0517dbc166bd5ea56e292241adefa27 78 SUPERFAMILY SSF50346 3 76 7.06E-14 T 14-10-2018 IPR011033 PRC-barrel-like superfamily DB29_00304 6a740353935fbd8a92a836f6313bba0e 88 ProDom PD060869 YQFT IG BH1387 1 73 2.0E-35 T 14-10-2018 IPR020277 Protein of unknown function DUF2624 DB29_00304 6a740353935fbd8a92a836f6313bba0e 88 Pfam PF11116 Protein of unknown function (DUF2624) 2 84 5.7E-28 T 14-10-2018 IPR020277 Protein of unknown function DUF2624 DB29_00093 88377310feed40d7e2ccea42d1380d5c 262 SUPERFAMILY SSF53335 71 243 3.93E-44 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DB29_00093 88377310feed40d7e2ccea42d1380d5c 262 Gene3D G3DSA:3.40.50.150 70 261 2.1E-62 T 14-10-2018 DB29_00093 88377310feed40d7e2ccea42d1380d5c 262 SMART SM00138 5 259 2.1E-80 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 DB29_00093 88377310feed40d7e2ccea42d1380d5c 262 Pfam PF01739 CheR methyltransferase, SAM binding domain 71 246 3.6E-54 T 14-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal DB29_00093 88377310feed40d7e2ccea42d1380d5c 262 PRINTS PR00996 Glutamate methyltransferase family signature 27 40 2.4E-36 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 DB29_00093 88377310feed40d7e2ccea42d1380d5c 262 PRINTS PR00996 Glutamate methyltransferase family signature 134 150 2.4E-36 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 DB29_00093 88377310feed40d7e2ccea42d1380d5c 262 PRINTS PR00996 Glutamate methyltransferase family signature 200 214 2.4E-36 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 DB29_00093 88377310feed40d7e2ccea42d1380d5c 262 PRINTS PR00996 Glutamate methyltransferase family signature 64 76 2.4E-36 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 DB29_00093 88377310feed40d7e2ccea42d1380d5c 262 PRINTS PR00996 Glutamate methyltransferase family signature 101 121 2.4E-36 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 DB29_00093 88377310feed40d7e2ccea42d1380d5c 262 PRINTS PR00996 Glutamate methyltransferase family signature 219 242 2.4E-36 T 14-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 DB29_00093 88377310feed40d7e2ccea42d1380d5c 262 Pfam PF03705 CheR methyltransferase, all-alpha domain 6 58 1.4E-12 T 14-10-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal DB29_00093 88377310feed40d7e2ccea42d1380d5c 262 SUPERFAMILY SSF47757 5 70 5.49E-12 T 14-10-2018 DB29_02039 7d4c2bd2a874c65311509ad5c52362e4 472 Pfam PF03553 Na+/H+ antiporter family 157 450 1.9E-63 T 14-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 DB29_02039 7d4c2bd2a874c65311509ad5c52362e4 472 TIGRFAM TIGR00931 antiport_nhaC: Na+/H+ antiporter NhaC 8 455 5.6E-134 T 14-10-2018 IPR004770 Na+/H+ antiporter NhaC GO:0015297|GO:0016021 DB29_00653 ae86f6fa535163f8405f46d42b3dfdbe 397 SUPERFAMILY SSF103473 5 382 1.7E-55 T 14-10-2018 IPR036259 MFS transporter superfamily DB29_00653 ae86f6fa535163f8405f46d42b3dfdbe 397 Gene3D G3DSA:1.20.1250.20 2 383 1.2E-45 T 14-10-2018 DB29_00653 ae86f6fa535163f8405f46d42b3dfdbe 397 Pfam PF07690 Major Facilitator Superfamily 10 346 9.8E-40 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DB29_03667 b56a1a3789d81fd136cb15c6a3da75cd 260 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 15 260 5.4E-123 T 14-10-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 DB29_03667 b56a1a3789d81fd136cb15c6a3da75cd 260 Gene3D G3DSA:3.40.50.300 14 258 8.0E-65 T 14-10-2018 DB29_03667 b56a1a3789d81fd136cb15c6a3da75cd 260 SMART SM00382 38 247 1.5E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_03667 b56a1a3789d81fd136cb15c6a3da75cd 260 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB29_03667 b56a1a3789d81fd136cb15c6a3da75cd 260 SUPERFAMILY SSF52540 11 249 2.2E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_03667 b56a1a3789d81fd136cb15c6a3da75cd 260 Pfam PF00005 ABC transporter 29 185 7.7E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB29_01040 a5d11afa236cd08b6dacc52ffd667a89 92 SUPERFAMILY SSF52794 1 89 1.91E-17 T 14-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 DB29_01040 a5d11afa236cd08b6dacc52ffd667a89 92 Gene3D G3DSA:3.40.50.2300 1 89 4.9E-21 T 14-10-2018 DB29_01040 a5d11afa236cd08b6dacc52ffd667a89 92 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 4 86 2.9E-12 T 14-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 DB29_03279 e664e924a61830f5de1af8424a4584a3 251 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 2 249 60.354 T 14-10-2018 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DB29_03279 e664e924a61830f5de1af8424a4584a3 251 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 5 241 8.2E-59 T 14-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DB29_03279 e664e924a61830f5de1af8424a4584a3 251 ProSitePatterns PS00171 Triosephosphate isomerase active site. 165 175 - T 14-10-2018 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DB29_03279 e664e924a61830f5de1af8424a4584a3 251 SUPERFAMILY SSF51351 1 249 1.96E-94 T 14-10-2018 IPR035990 Triosephosphate isomerase superfamily GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DB29_03279 e664e924a61830f5de1af8424a4584a3 251 Gene3D G3DSA:3.20.20.70 2 251 3.3E-105 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DB29_03279 e664e924a61830f5de1af8424a4584a3 251 Pfam PF00121 Triosephosphate isomerase 5 247 2.9E-95 T 14-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 DB29_03905 75a8da7e0ae18b15a1a043ae06d0ca53 126 Pfam PF11877 Protein of unknown function (DUF3397) 9 118 1.2E-23 T 14-10-2018 IPR024515 Protein of unknown function DUF3397 DB29_03905 75a8da7e0ae18b15a1a043ae06d0ca53 126 PIRSF PIRSF030092 1 126 2.8E-47 T 14-10-2018 IPR016945 Uncharacterised conserved protein UCP030092 DB29_01084 9d1e6aa244db9d72c138a815918bf7d6 273 SUPERFAMILY SSF52540 22 267 1.33E-77 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_01084 9d1e6aa244db9d72c138a815918bf7d6 273 Pfam PF00005 ABC transporter 38 196 1.2E-37 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB29_01084 9d1e6aa244db9d72c138a815918bf7d6 273 Gene3D G3DSA:3.40.50.300 18 271 2.5E-79 T 14-10-2018 DB29_01084 9d1e6aa244db9d72c138a815918bf7d6 273 SMART SM00382 47 245 1.1E-18 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_01084 9d1e6aa244db9d72c138a815918bf7d6 273 PIRSF PIRSF039085 19 273 1.9E-106 T 14-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 DB29_01084 9d1e6aa244db9d72c138a815918bf7d6 273 ProSitePatterns PS00211 ABC transporters family signature. 168 182 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB29_01084 9d1e6aa244db9d72c138a815918bf7d6 273 TIGRFAM TIGR03005 ectoine_ehuA: ectoine/hydroxyectoine ABC transporter, ATP-binding protein EhuA 23 269 5.7E-114 T 14-10-2018 IPR014343 Ectoine/hydroxyectoine ABC transporter, ATP-binding protein DB29_01782 3e409ccf34bb9cf638007f7e897ad5d0 157 SUPERFAMILY SSF55729 11 153 2.34E-17 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase DB29_01782 3e409ccf34bb9cf638007f7e897ad5d0 157 Gene3D G3DSA:3.40.630.30 7 156 6.8E-18 T 14-10-2018 DB29_01782 3e409ccf34bb9cf638007f7e897ad5d0 157 Pfam PF13302 Acetyltransferase (GNAT) domain 12 131 5.0E-10 T 14-10-2018 IPR000182 GNAT domain DB29_04055 5f19de699273571d46e997145a4dde9e 89 Gene3D G3DSA:1.10.287.10 2 89 1.0E-37 T 14-10-2018 DB29_04055 5f19de699273571d46e997145a4dde9e 89 Pfam PF00312 Ribosomal protein S15 8 88 2.9E-38 T 14-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DB29_04055 5f19de699273571d46e997145a4dde9e 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 4 89 1.8E-42 T 14-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB29_04055 5f19de699273571d46e997145a4dde9e 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 23.01 T 14-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB29_04055 5f19de699273571d46e997145a4dde9e 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 14-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DB29_04055 5f19de699273571d46e997145a4dde9e 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 10 88 8.0E-40 T 14-10-2018 DB29_04055 5f19de699273571d46e997145a4dde9e 89 SMART SM01387 8 88 1.9E-52 T 14-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DB29_04055 5f19de699273571d46e997145a4dde9e 89 SUPERFAMILY SSF47060 3 89 6.77E-37 T 14-10-2018 IPR009068 S15/NS1, RNA-binding DB29_02108 eee473846cd734c46d3088c55aca3f90 282 SMART SM00382 30 209 1.2E-12 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_02108 eee473846cd734c46d3088c55aca3f90 282 Pfam PF00005 ABC transporter 21 160 2.5E-25 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB29_02108 eee473846cd734c46d3088c55aca3f90 282 SUPERFAMILY SSF52540 3 225 2.71E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_02108 eee473846cd734c46d3088c55aca3f90 282 Gene3D G3DSA:3.40.50.300 2 272 3.6E-48 T 14-10-2018 DB29_02390 24cf5d6110b7553885eddd0f959070fe 264 Pfam PF11299 Protein of unknown function (DUF3100) 22 254 5.5E-94 T 14-10-2018 IPR021450 Protein of unknown function DUF3100 DB29_02193 8852ba5522589877e6cfd04936e73a5f 556 Pfam PF00939 Sodium:sulfate symporter transmembrane region 75 543 2.7E-90 T 14-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 DB29_02193 8852ba5522589877e6cfd04936e73a5f 556 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 86 539 4.3E-86 T 14-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 DB29_02440 de27203b63b3c9df0c44321e60e4e820 467 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 37 110 1.4E-13 T 14-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 DB29_02440 de27203b63b3c9df0c44321e60e4e820 467 Pfam PF02378 Phosphotransferase system, EIIC 111 402 2.6E-36 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 DB29_02440 de27203b63b3c9df0c44321e60e4e820 467 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 21 38 - T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 DB29_02440 de27203b63b3c9df0c44321e60e4e820 467 TIGRFAM TIGR01996 PTS-II-BC-sucr: PTS system, sucrose-specific IIBC component 4 456 3.3E-183 T 14-10-2018 IPR010973 Phosphotransferase system, sucrose-specific IIBC component GO:0008982|GO:0009401|GO:0016021 DB29_02440 de27203b63b3c9df0c44321e60e4e820 467 Gene3D G3DSA:3.30.1360.60 3 80 7.1E-26 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 DB29_02440 de27203b63b3c9df0c44321e60e4e820 467 SUPERFAMILY SSF55604 7 81 4.71E-21 T 14-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 DB29_02440 de27203b63b3c9df0c44321e60e4e820 467 Pfam PF00367 phosphotransferase system, EIIB 10 43 3.5E-15 T 14-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 DB29_01781 f9447a3ee66077bddb41d37031b4016e 632 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 15 500 1.9E-174 T 14-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 DB29_01781 f9447a3ee66077bddb41d37031b4016e 632 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 53 497 9.8E-145 T 14-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 DB29_01781 f9447a3ee66077bddb41d37031b4016e 632 Pfam PF02080 TrkA-C domain 564 624 3.5E-13 T 14-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 DB29_01781 f9447a3ee66077bddb41d37031b4016e 632 SUPERFAMILY SSF116726 556 625 1.06E-12 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 DB29_01781 f9447a3ee66077bddb41d37031b4016e 632 Gene3D G3DSA:3.30.70.1450 549 629 3.5E-17 T 14-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 DB29_02115 7e5fe4715561cc0de453f0d511bdec43 318 SUPERFAMILY SSF161098 88 299 6.15E-15 T 14-10-2018 IPR035906 MetI-like superfamily DB29_02115 7e5fe4715561cc0de453f0d511bdec43 318 Gene3D G3DSA:1.10.3720.10 83 309 1.2E-16 T 14-10-2018 IPR035906 MetI-like superfamily DB29_02115 7e5fe4715561cc0de453f0d511bdec43 318 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 316 1.5E-38 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DB29_01169 f3feec0cf6e8c9c1c95c6f6fc80e81ef 394 Gene3D G3DSA:2.60.120.10 66 239 1.9E-165 T 14-10-2018 IPR014710 RmlC-like jelly roll fold DB29_01169 f3feec0cf6e8c9c1c95c6f6fc80e81ef 394 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 92 172 0.002 T 14-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 DB29_01169 f3feec0cf6e8c9c1c95c6f6fc80e81ef 394 Gene3D G3DSA:2.60.120.10 17 383 1.9E-165 T 14-10-2018 IPR014710 RmlC-like jelly roll fold DB29_01169 f3feec0cf6e8c9c1c95c6f6fc80e81ef 394 SUPERFAMILY SSF51182 31 388 6.38E-104 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily DB29_01169 f3feec0cf6e8c9c1c95c6f6fc80e81ef 394 Pfam PF00190 Cupin 70 196 2.9E-18 T 14-10-2018 IPR006045 Cupin 1 GO:0045735 DB29_01169 f3feec0cf6e8c9c1c95c6f6fc80e81ef 394 Pfam PF00190 Cupin 239 376 8.4E-24 T 14-10-2018 IPR006045 Cupin 1 GO:0045735 DB29_01169 f3feec0cf6e8c9c1c95c6f6fc80e81ef 394 TIGRFAM TIGR03404 bicupin_oxalic: bicupin, oxalate decarboxylase family 24 389 3.2E-177 T 14-10-2018 IPR017774 Bicupin, oxalate decarboxylase/oxidase GO:0033609 KEGG: 00630+4.1.1.2|MetaCyc: PWY-6698 DB29_01169 f3feec0cf6e8c9c1c95c6f6fc80e81ef 394 SMART SM00835 238 379 4.9E-26 T 14-10-2018 IPR006045 Cupin 1 GO:0045735 DB29_01169 f3feec0cf6e8c9c1c95c6f6fc80e81ef 394 SMART SM00835 60 202 1.8E-17 T 14-10-2018 IPR006045 Cupin 1 GO:0045735 DB29_04377 67fafcdd2e16ccb95484a93b3d13a946 375 TIGRFAM TIGR02872 spore_ytvI: sporulation integral membrane protein YtvI 11 356 7.6E-78 T 14-10-2018 IPR014227 Putative transport protein YtvI-like DB29_04377 67fafcdd2e16ccb95484a93b3d13a946 375 Pfam PF01594 AI-2E family transporter 14 352 6.7E-55 T 14-10-2018 IPR002549 Transmembrane protein TqsA-like DB29_03323 6832e70caabc89d6cd69c4bcbf2563c4 407 Pfam PF00266 Aminotransferase class-V 23 391 1.8E-154 T 14-10-2018 IPR000192 Aminotransferase class V domain DB29_03323 6832e70caabc89d6cd69c4bcbf2563c4 407 Gene3D G3DSA:3.90.1150.10 6 394 1.8E-176 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DB29_03323 6832e70caabc89d6cd69c4bcbf2563c4 407 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 215 234 - T 14-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site DB29_03323 6832e70caabc89d6cd69c4bcbf2563c4 407 SUPERFAMILY SSF53383 2 398 1.46E-127 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DB29_03323 6832e70caabc89d6cd69c4bcbf2563c4 407 PIRSF PIRSF005572 20 397 2.3E-49 T 14-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 DB29_03323 6832e70caabc89d6cd69c4bcbf2563c4 407 Gene3D G3DSA:3.40.640.10 34 294 1.8E-176 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DB29_03323 6832e70caabc89d6cd69c4bcbf2563c4 407 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 4 402 7.5E-185 T 14-10-2018 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 DB29_04136 33935c8d0a5454b21939688ba9cb4a6c 383 TIGRFAM TIGR00552 nadE: NAD+ synthetase 128 382 3.6E-75 T 14-10-2018 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|Reactome: R-HSA-196807 DB29_04136 33935c8d0a5454b21939688ba9cb4a6c 383 SUPERFAMILY SSF52402 113 382 9.61E-82 T 14-10-2018 DB29_04136 33935c8d0a5454b21939688ba9cb4a6c 383 Pfam PF02540 NAD synthase 132 373 1.7E-70 T 14-10-2018 IPR022310 NAD/GMP synthase DB29_04136 33935c8d0a5454b21939688ba9cb4a6c 383 Gene3D G3DSA:3.40.50.620 105 383 1.8E-78 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DB29_04136 33935c8d0a5454b21939688ba9cb4a6c 383 Hamap MF_00193 NH(3)-dependent NAD(+) synthetase [nadE]. 127 376 49.467 T 14-10-2018 IPR022926 NH(3)-dependent NAD(+) synthetase GO:0008795|GO:0009435 KEGG: 00760+6.3.1.5 DB29_01241 d54d755ff6a8a80165e7389366f7a3da 200 Pfam PF13539 D-alanyl-D-alanine carboxypeptidase 107 178 6.1E-19 T 14-10-2018 IPR039561 Peptidase M15C GO:0008233 DB29_01241 d54d755ff6a8a80165e7389366f7a3da 200 Gene3D G3DSA:3.30.1380.10 45 178 1.0E-39 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 DB29_01241 d54d755ff6a8a80165e7389366f7a3da 200 SUPERFAMILY SSF55166 55 178 6.28E-33 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 DB29_01478 bffd84f9bbd24b62af501ba014c5074a 346 Pfam PF00005 ABC transporter 21 169 9.6E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB29_01478 bffd84f9bbd24b62af501ba014c5074a 346 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB29_01478 bffd84f9bbd24b62af501ba014c5074a 346 SMART SM00382 30 218 3.7E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_01478 bffd84f9bbd24b62af501ba014c5074a 346 SMART SM00930 263 338 1.6E-15 T 14-10-2018 IPR018449 NIL domain DB29_01478 bffd84f9bbd24b62af501ba014c5074a 346 Gene3D G3DSA:3.30.70.260 233 340 2.8E-18 T 14-10-2018 DB29_01478 bffd84f9bbd24b62af501ba014c5074a 346 SUPERFAMILY SSF55021 249 339 2.17E-14 T 14-10-2018 DB29_01478 bffd84f9bbd24b62af501ba014c5074a 346 Gene3D G3DSA:3.40.50.300 1 232 3.3E-76 T 14-10-2018 DB29_01478 bffd84f9bbd24b62af501ba014c5074a 346 Pfam PF09383 NIL domain 266 332 5.4E-13 T 14-10-2018 IPR018449 NIL domain DB29_01478 bffd84f9bbd24b62af501ba014c5074a 346 SUPERFAMILY SSF52540 1 240 1.31E-84 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_01844 dd16cbc993a25d612c866902df12a930 262 SMART SM00422 7 76 3.0E-19 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DB29_01844 dd16cbc993a25d612c866902df12a930 262 Gene3D G3DSA:1.10.1660.10 5 140 3.5E-31 T 14-10-2018 DB29_01844 dd16cbc993a25d612c866902df12a930 262 SUPERFAMILY SSF46955 6 110 9.89E-26 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily DB29_01844 dd16cbc993a25d612c866902df12a930 262 Pfam PF13411 MerR HTH family regulatory protein 7 74 2.5E-16 T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DB29_01844 dd16cbc993a25d612c866902df12a930 262 ProSitePatterns PS00552 MerR-type HTH domain signature. 10 32 - T 14-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 DB29_03958 5c6d3b091db620efec96b749bd7023bf 249 Pfam PF13672 Protein phosphatase 2C 15 204 1.2E-18 T 14-10-2018 DB29_03958 5c6d3b091db620efec96b749bd7023bf 249 Gene3D G3DSA:3.60.40.10 3 247 1.0E-66 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 DB29_03958 5c6d3b091db620efec96b749bd7023bf 249 SMART SM00332 1 241 2.0E-20 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 DB29_03958 5c6d3b091db620efec96b749bd7023bf 249 SMART SM00331 9 243 1.8E-40 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 DB29_03958 5c6d3b091db620efec96b749bd7023bf 249 SUPERFAMILY SSF81606 4 243 8.24E-61 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 DB29_03932 035f77bef738d302627cfa6b366cc6a2 207 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 79 103 1.4E-6 T 14-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 DB29_03932 035f77bef738d302627cfa6b366cc6a2 207 SUPERFAMILY SSF109635 3 80 2.75E-10 T 14-10-2018 IPR037187 DksA, N-terminal domain superfamily DB29_03932 035f77bef738d302627cfa6b366cc6a2 207 SUPERFAMILY SSF57716 81 115 4.13E-5 T 14-10-2018 DB29_03932 035f77bef738d302627cfa6b366cc6a2 207 TIGRFAM TIGR02890 bacill_yteA: regulatory protein, yteA family 3 151 6.3E-59 T 14-10-2018 IPR014240 Regulatory protein, YteA family DB29_03932 035f77bef738d302627cfa6b366cc6a2 207 Gene3D G3DSA:1.20.120.910 1 117 3.3E-27 T 14-10-2018 DB29_03758 b9debf21a79719b95be8d3b8a99a3c75 345 Pfam PF00482 Type II secretion system (T2SS), protein F 15 135 2.4E-13 T 14-10-2018 IPR018076 Type II secretion system F domain DB29_03758 b9debf21a79719b95be8d3b8a99a3c75 345 Pfam PF00482 Type II secretion system (T2SS), protein F 214 336 1.3E-17 T 14-10-2018 IPR018076 Type II secretion system F domain DB29_03758 b9debf21a79719b95be8d3b8a99a3c75 345 Gene3D G3DSA:1.20.81.30 201 310 1.2E-11 T 14-10-2018 DB29_03758 b9debf21a79719b95be8d3b8a99a3c75 345 Gene3D G3DSA:1.20.81.30 4 111 6.5E-14 T 14-10-2018 DB29_03758 b9debf21a79719b95be8d3b8a99a3c75 345 PRINTS PR00812 Bacterial general secretion pathway protein F signature 107 135 7.4E-5 T 14-10-2018 IPR003004 GspF/PilC family DB29_03758 b9debf21a79719b95be8d3b8a99a3c75 345 PRINTS PR00812 Bacterial general secretion pathway protein F signature 309 323 7.4E-5 T 14-10-2018 IPR003004 GspF/PilC family DB29_03758 b9debf21a79719b95be8d3b8a99a3c75 345 PRINTS PR00812 Bacterial general secretion pathway protein F signature 325 344 7.4E-5 T 14-10-2018 IPR003004 GspF/PilC family DB29_01302 f6316a1723feb8f229deaaefcd17aeea 168 Pfam PF03551 Transcriptional regulator PadR-like family 7 78 1.0E-12 T 14-10-2018 IPR005149 Transcription regulator PadR, N-terminal DB29_01302 f6316a1723feb8f229deaaefcd17aeea 168 Gene3D G3DSA:1.10.10.10 1 86 8.2E-17 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_01302 f6316a1723feb8f229deaaefcd17aeea 168 SUPERFAMILY SSF46785 3 164 2.01E-26 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_00827 d5956fbc9466a04e938cd3e24081ad64 68 Pfam PF08970 Sporulation inhibitor A 1 43 4.1E-21 T 14-10-2018 IPR015064 Sporulation inhibitor A DB29_00827 d5956fbc9466a04e938cd3e24081ad64 68 Gene3D G3DSA:1.10.287.1100 4 37 2.6E-11 T 14-10-2018 IPR036916 Sporulation inhibitor A superfamily DB29_00827 d5956fbc9466a04e938cd3e24081ad64 68 SUPERFAMILY SSF100985 1 44 1.02E-17 T 14-10-2018 IPR036916 Sporulation inhibitor A superfamily DB29_01104 074c9cf208f8311d25dc7d0e93bd0d01 171 Gene3D G3DSA:3.40.50.300 6 166 3.1E-41 T 14-10-2018 DB29_01104 074c9cf208f8311d25dc7d0e93bd0d01 171 TIGRFAM TIGR00176 mobB: molybdopterin-guanine dinucleotide biosynthesis protein B 7 160 1.5E-25 T 14-10-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 DB29_01104 074c9cf208f8311d25dc7d0e93bd0d01 171 Pfam PF03205 Molybdopterin guanine dinucleotide synthesis protein B 7 125 7.2E-26 T 14-10-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 DB29_01104 074c9cf208f8311d25dc7d0e93bd0d01 171 SUPERFAMILY SSF52540 6 161 3.7E-16 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_00084 94279bf26e5a7ee8b2517bd8e7eb7898 269 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 44 57 - T 14-10-2018 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 DB29_00084 94279bf26e5a7ee8b2517bd8e7eb7898 269 SUPERFAMILY SSF51366 10 236 2.83E-80 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 DB29_00084 94279bf26e5a7ee8b2517bd8e7eb7898 269 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 10 262 7.2E-87 T 14-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 DB29_00084 94279bf26e5a7ee8b2517bd8e7eb7898 269 Pfam PF00290 Tryptophan synthase alpha chain 10 256 2.5E-89 T 14-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 DB29_00084 94279bf26e5a7ee8b2517bd8e7eb7898 269 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 10 265 34.967 T 14-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 DB29_00084 94279bf26e5a7ee8b2517bd8e7eb7898 269 Gene3D G3DSA:3.20.20.70 2 265 3.5E-97 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DB29_01185 1433ce4f2e57258ce340e5b8edf61394 208 SMART SM00331 7 199 9.3E-15 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 DB29_01185 1433ce4f2e57258ce340e5b8edf61394 208 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 36 170 7.8E-13 T 14-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 DB29_01185 1433ce4f2e57258ce340e5b8edf61394 208 Gene3D G3DSA:3.60.40.10 2 199 1.1E-36 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 DB29_01185 1433ce4f2e57258ce340e5b8edf61394 208 SUPERFAMILY SSF81606 11 198 5.89E-11 T 14-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 DB29_00178 a747ab1f38fb19c77581c4fbb9271490 156 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 9 154 32.078 T 14-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 DB29_00178 a747ab1f38fb19c77581c4fbb9271490 156 SUPERFAMILY SSF52121 5 154 2.22E-65 T 14-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 DB29_00178 a747ab1f38fb19c77581c4fbb9271490 156 Gene3D G3DSA:3.40.50.960 3 155 4.5E-66 T 14-10-2018 IPR036467 Lumazine/riboflavin synthase superfamily GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 DB29_00178 a747ab1f38fb19c77581c4fbb9271490 156 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 13 151 1.7E-61 T 14-10-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 DB29_00178 a747ab1f38fb19c77581c4fbb9271490 156 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 14 150 9.9E-60 T 14-10-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 DB29_01799 b877832e6ac1a3cfc9763791768b31c6 126 Gene3D G3DSA:1.10.4040.10 73 123 2.8E-17 T 14-10-2018 DB29_01799 b877832e6ac1a3cfc9763791768b31c6 126 Pfam PF03965 Penicillinase repressor 8 122 1.2E-34 T 14-10-2018 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 DB29_01799 b877832e6ac1a3cfc9763791768b31c6 126 PIRSF PIRSF019455 1 126 4.2E-38 T 14-10-2018 IPR005650 BlaI transcriptional regulatory family GO:0003677|GO:0045892 DB29_01799 b877832e6ac1a3cfc9763791768b31c6 126 Gene3D G3DSA:1.10.10.10 9 72 1.1E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_01799 b877832e6ac1a3cfc9763791768b31c6 126 SUPERFAMILY SSF46785 7 125 1.85E-32 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_03198 6a6867818665a2e2006b034c15b60bb5 362 TIGRFAM TIGR00350 lytR_cpsA_psr: cell envelope-related function transcriptional attenuator common domain 92 245 3.6E-42 T 14-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain DB29_03198 6a6867818665a2e2006b034c15b60bb5 362 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 92 245 1.2E-43 T 14-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain DB29_03198 6a6867818665a2e2006b034c15b60bb5 362 Gene3D G3DSA:1.10.260.150 57 352 7.9E-80 T 14-10-2018 DB29_01284 07544d7a6d0ba7075657c4fb83dac7dc 565 Gene3D G3DSA:3.30.565.10 421 564 2.2E-8 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB29_01284 07544d7a6d0ba7075657c4fb83dac7dc 565 SMART SM00304 298 350 1.2E-4 T 14-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 DB29_01284 07544d7a6d0ba7075657c4fb83dac7dc 565 SUPERFAMILY SSF55874 432 544 4.89E-8 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB29_01284 07544d7a6d0ba7075657c4fb83dac7dc 565 Pfam PF06580 Histidine kinase 363 437 2.7E-18 T 14-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 DB29_01545 680b839c18a697d15f54d4dbd0e66df9 63 SUPERFAMILY SSF110738 12 53 9.94E-5 T 14-10-2018 IPR036129 Glycerate kinase superfamily GO:0008887|GO:0031388 DB29_01694 692c46f10ef77eb8bdce29ceabfa8fe6 176 PIRSF PIRSF016897 1 175 1.1E-62 T 14-10-2018 IPR006699 Glycerol uptake operon antiterminator GO:0006071|GO:0006355 DB29_01694 692c46f10ef77eb8bdce29ceabfa8fe6 176 Pfam PF04309 Glycerol-3-phosphate responsive antiterminator 7 174 1.6E-57 T 14-10-2018 IPR006699 Glycerol uptake operon antiterminator GO:0006071|GO:0006355 DB29_01694 692c46f10ef77eb8bdce29ceabfa8fe6 176 Gene3D G3DSA:3.20.20.400 1 175 2.2E-56 T 14-10-2018 IPR035928 GlpP-like superfamily DB29_01694 692c46f10ef77eb8bdce29ceabfa8fe6 176 SUPERFAMILY SSF110391 5 174 2.75E-51 T 14-10-2018 IPR035928 GlpP-like superfamily DB29_01670 fb862e11315f8d9abc4300a1aae5873f 581 Pfam PF06580 Histidine kinase 367 439 4.9E-20 T 14-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 DB29_01670 fb862e11315f8d9abc4300a1aae5873f 581 Gene3D G3DSA:1.20.1480.50 271 361 3.2E-5 T 14-10-2018 DB29_01670 fb862e11315f8d9abc4300a1aae5873f 581 SMART SM00387 456 558 0.0044 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DB29_01670 fb862e11315f8d9abc4300a1aae5873f 581 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 465 557 2.3E-5 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DB29_01670 fb862e11315f8d9abc4300a1aae5873f 581 Gene3D G3DSA:3.30.565.10 422 563 7.6E-20 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB29_01670 fb862e11315f8d9abc4300a1aae5873f 581 SUPERFAMILY SSF55874 421 555 2.23E-18 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB29_03986 f84205f5761ecbecf7fd5901085b4d12 244 Gene3D G3DSA:3.40.1280.10 1 174 3.0E-71 T 14-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal DB29_03986 f84205f5761ecbecf7fd5901085b4d12 244 SUPERFAMILY SSF75217 1 241 1.46E-101 T 14-10-2018 IPR029028 Alpha/beta knot methyltransferases DB29_03986 f84205f5761ecbecf7fd5901085b4d12 244 PIRSF PIRSF000386 1 244 8.2E-105 T 14-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 DB29_03986 f84205f5761ecbecf7fd5901085b4d12 244 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 231 1.1E-102 T 14-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 DB29_03986 f84205f5761ecbecf7fd5901085b4d12 244 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 244 110.899 T 14-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 DB29_03986 f84205f5761ecbecf7fd5901085b4d12 244 Gene3D G3DSA:1.10.1270.20 175 243 4.8E-31 T 14-10-2018 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 DB29_03986 f84205f5761ecbecf7fd5901085b4d12 244 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 23 220 2.2E-74 T 14-10-2018 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 DB29_02031 9d8342c4b553853ac3450a44fcfa1fce 266 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 43 261 1.9E-64 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DB29_02031 9d8342c4b553853ac3450a44fcfa1fce 266 SMART SM00079 41 261 2.8E-8 T 14-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 DB29_02031 9d8342c4b553853ac3450a44fcfa1fce 266 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 65 78 - T 14-10-2018 IPR018313 Solute-binding protein family 3, conserved site DB29_02031 9d8342c4b553853ac3450a44fcfa1fce 266 Gene3D G3DSA:3.40.190.10 127 222 2.1E-71 T 14-10-2018 DB29_02031 9d8342c4b553853ac3450a44fcfa1fce 266 SUPERFAMILY SSF53850 1 261 1.84E-69 T 14-10-2018 DB29_02031 9d8342c4b553853ac3450a44fcfa1fce 266 Gene3D G3DSA:3.40.190.10 44 259 2.1E-71 T 14-10-2018 DB29_02031 9d8342c4b553853ac3450a44fcfa1fce 266 SMART SM00062 41 262 1.6E-64 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DB29_01850 cca6546fd1dc553c05264cb2d1294362 46 Pfam PF14089 KinB-signalling pathway activation in sporulation 1 42 1.9E-16 T 14-10-2018 IPR024164 KinB-signalling pathway activation protein GO:0045881 DB29_04050 c2e861c040afd5ead0fdaf0100cceb99 92 Pfam PF04456 Protein of unknown function (DUF503) 3 86 2.3E-25 T 14-10-2018 IPR007546 Protein of unknown function DUF503 DB29_04050 c2e861c040afd5ead0fdaf0100cceb99 92 SUPERFAMILY SSF103007 1 91 8.37E-25 T 14-10-2018 IPR036746 TT1725-like superfamily DB29_04050 c2e861c040afd5ead0fdaf0100cceb99 92 Gene3D G3DSA:3.30.70.1120 1 91 2.9E-19 T 14-10-2018 IPR036746 TT1725-like superfamily DB29_00426 bd535abc6db4cc42f2401e67910cfb6f 358 Pfam PF01594 AI-2E family transporter 18 346 6.0E-71 T 14-10-2018 IPR002549 Transmembrane protein TqsA-like DB29_01513 9454a09c97d4a10a77e64c4cf5900431 273 SUPERFAMILY SSF56281 38 247 1.57E-33 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DB29_01513 9454a09c97d4a10a77e64c4cf5900431 273 Gene3D G3DSA:3.60.15.10 12 226 1.4E-26 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DB29_01513 9454a09c97d4a10a77e64c4cf5900431 273 Pfam PF00753 Metallo-beta-lactamase superfamily 38 199 7.3E-12 T 14-10-2018 IPR001279 Metallo-beta-lactamase DB29_01513 9454a09c97d4a10a77e64c4cf5900431 273 SMART SM00849 30 199 1.1E-20 T 14-10-2018 IPR001279 Metallo-beta-lactamase DB29_03658 9686df6747ceacd060ec065158772fe2 373 Gene3D G3DSA:3.50.50.60 4 350 2.3E-79 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB29_03658 9686df6747ceacd060ec065158772fe2 373 Pfam PF01266 FAD dependent oxidoreductase 3 349 6.7E-54 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 DB29_03658 9686df6747ceacd060ec065158772fe2 373 SUPERFAMILY SSF54373 224 311 5.1E-14 T 14-10-2018 DB29_03658 9686df6747ceacd060ec065158772fe2 373 Gene3D G3DSA:3.30.9.10 88 310 2.3E-79 T 14-10-2018 DB29_03658 9686df6747ceacd060ec065158772fe2 373 SUPERFAMILY SSF51905 1 365 1.81E-42 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB29_01303 36563419583d3b69eaeb886d11554aa2 820 Pfam PF02687 FtsX-like permease family 722 812 6.0E-12 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 DB29_01303 36563419583d3b69eaeb886d11554aa2 820 Pfam PF02687 FtsX-like permease family 283 376 4.2E-13 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 DB29_01303 36563419583d3b69eaeb886d11554aa2 820 Pfam PF12704 MacB-like periplasmic core domain 468 634 2.8E-7 T 14-10-2018 IPR025857 MacB-like periplasmic core domain DB29_01303 36563419583d3b69eaeb886d11554aa2 820 Pfam PF12704 MacB-like periplasmic core domain 20 194 1.9E-7 T 14-10-2018 IPR025857 MacB-like periplasmic core domain DB29_01455 040f2eded6b845b6361472fcdcdde42e 344 Gene3D G3DSA:2.70.98.10 4 344 3.3E-109 T 14-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 DB29_01455 040f2eded6b845b6361472fcdcdde42e 344 PIRSF PIRSF005096 4 344 5.2E-114 T 14-10-2018 IPR015443 Aldose 1-epimerase GO:0016853|GO:0019318 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 DB29_01455 040f2eded6b845b6361472fcdcdde42e 344 Pfam PF01263 Aldose 1-epimerase 14 340 7.9E-79 T 14-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 DB29_01455 040f2eded6b845b6361472fcdcdde42e 344 SUPERFAMILY SSF74650 9 342 1.88E-101 T 14-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 DB29_00887 c8bf9beed4952c6af0b64dcf2c77b73e 480 PIRSF PIRSF002746 1 451 2.6E-176 T 14-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 DB29_00887 c8bf9beed4952c6af0b64dcf2c77b73e 480 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 1 444 3.2E-193 T 14-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 DB29_00887 c8bf9beed4952c6af0b64dcf2c77b73e 480 Pfam PF02447 GntP family permease 1 445 8.3E-178 T 14-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 DB29_00777 f6ec9666b1d6d4fa5afe207f19d121fb 251 Pfam PF12730 ABC-2 family transporter protein 7 166 3.5E-9 T 14-10-2018 IPR032688 ABC-2 family transporter protein GO:0055085 DB29_00777 f6ec9666b1d6d4fa5afe207f19d121fb 251 TIGRFAM TIGR03732 lanti_perm_MutE: lantibiotic protection ABC transporter permease subunit, MutE/EpiE family 5 247 1.1E-97 T 14-10-2018 IPR021205 Lantibiotic ABC transporter permease subunit, SpaE/MutE DB29_00961 694e698c269e310616192f21c53522a5 239 ProSitePatterns PS01058 SAICAR synthetase signature 2. 173 181 - T 14-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 DB29_00961 694e698c269e310616192f21c53522a5 239 Pfam PF01259 SAICAR synthetase 7 231 5.8E-66 T 14-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 DB29_00961 694e698c269e310616192f21c53522a5 239 ProSitePatterns PS01057 SAICAR synthetase signature 1. 86 100 - T 14-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 DB29_00961 694e698c269e310616192f21c53522a5 239 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 5 230 8.4E-73 T 14-10-2018 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234 DB29_00961 694e698c269e310616192f21c53522a5 239 Gene3D G3DSA:3.30.200.20 7 232 5.4E-95 T 14-10-2018 DB29_00961 694e698c269e310616192f21c53522a5 239 Gene3D G3DSA:3.30.470.20 85 221 5.4E-95 T 14-10-2018 DB29_00961 694e698c269e310616192f21c53522a5 239 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 4 235 32.796 T 14-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 DB29_00961 694e698c269e310616192f21c53522a5 239 SUPERFAMILY SSF56104 2 235 1.54E-79 T 14-10-2018 DB29_02516 843986a10552a1275a70bea38844044c 322 SUPERFAMILY SSF53448 6 296 2.58E-25 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DB29_02516 843986a10552a1275a70bea38844044c 322 Pfam PF00535 Glycosyl transferase family 2 9 157 4.7E-14 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 DB29_02516 843986a10552a1275a70bea38844044c 322 Gene3D G3DSA:3.90.550.10 2 240 1.2E-20 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DB29_00818 24ac50f99140c9e671a885eef71e075a 302 SUPERFAMILY SSF56601 12 296 1.48E-53 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like DB29_00818 24ac50f99140c9e671a885eef71e075a 302 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 50 276 6.2E-47 T 14-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 DB29_00818 24ac50f99140c9e671a885eef71e075a 302 Gene3D G3DSA:3.40.710.10 30 301 5.4E-70 T 14-10-2018 DB29_00818 24ac50f99140c9e671a885eef71e075a 302 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 152 165 5.1E-14 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 DB29_00818 24ac50f99140c9e671a885eef71e075a 302 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 125 142 5.1E-14 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 DB29_00818 24ac50f99140c9e671a885eef71e075a 302 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 72 83 5.1E-14 T 14-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 DB29_00420 20ef3dd6f9f633047d37b2c21a6e73a1 379 Pfam PF02618 YceG-like family 66 365 1.4E-73 T 14-10-2018 IPR003770 Endolytic murein transglycosylase DB29_00420 20ef3dd6f9f633047d37b2c21a6e73a1 379 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 24 370 1.1E-83 T 14-10-2018 IPR003770 Endolytic murein transglycosylase DB29_00420 20ef3dd6f9f633047d37b2c21a6e73a1 379 Hamap MF_02065 Endolytic murein transglycosylase [mltG]. 25 370 31.155 T 14-10-2018 IPR003770 Endolytic murein transglycosylase DB29_00420 20ef3dd6f9f633047d37b2c21a6e73a1 379 Gene3D G3DSA:1.10.8.1150 61 135 6.0E-27 T 14-10-2018 DB29_04184 a231a650f0b46750e0847da2f728ec2b 179 SUPERFAMILY SSF55729 6 168 8.77E-26 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase DB29_04184 a231a650f0b46750e0847da2f728ec2b 179 Pfam PF13302 Acetyltransferase (GNAT) domain 24 143 7.8E-17 T 14-10-2018 IPR000182 GNAT domain DB29_04184 a231a650f0b46750e0847da2f728ec2b 179 Gene3D G3DSA:3.40.630.30 2 179 1.6E-30 T 14-10-2018 DB29_00878 09271434db973e2ddb518399926c549f 524 Gene3D G3DSA:3.40.50.1980 299 411 5.6E-20 T 14-10-2018 DB29_00878 09271434db973e2ddb518399926c549f 524 Pfam PF01297 Zinc-uptake complex component A periplasmic 37 520 7.6E-64 T 14-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 DB29_00878 09271434db973e2ddb518399926c549f 524 PRINTS PR00690 Adhesin family signature 65 78 5.5E-5 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 DB29_00878 09271434db973e2ddb518399926c549f 524 PRINTS PR00690 Adhesin family signature 78 95 5.5E-5 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 DB29_00878 09271434db973e2ddb518399926c549f 524 PRINTS PR00690 Adhesin family signature 34 52 5.5E-5 T 14-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 DB29_00878 09271434db973e2ddb518399926c549f 524 SUPERFAMILY SSF53807 33 136 5.89E-26 T 14-10-2018 DB29_00878 09271434db973e2ddb518399926c549f 524 Gene3D G3DSA:3.40.50.1980 412 524 1.7E-35 T 14-10-2018 DB29_00878 09271434db973e2ddb518399926c549f 524 SUPERFAMILY SSF53807 347 520 1.37E-50 T 14-10-2018 DB29_00878 09271434db973e2ddb518399926c549f 524 Gene3D G3DSA:3.40.50.1980 25 183 3.4E-31 T 14-10-2018 DB29_01643 e9b331bf2acd1daa003abf9e60c7403c 358 SUPERFAMILY SSF53822 32 344 4.71E-72 T 14-10-2018 IPR028082 Periplasmic binding protein-like I DB29_01643 e9b331bf2acd1daa003abf9e60c7403c 358 Gene3D G3DSA:3.40.50.2300 34 331 5.6E-134 T 14-10-2018 DB29_01643 e9b331bf2acd1daa003abf9e60c7403c 358 Gene3D G3DSA:3.40.50.2300 136 352 5.6E-134 T 14-10-2018 DB29_01643 e9b331bf2acd1daa003abf9e60c7403c 358 Pfam PF13407 Periplasmic binding protein domain 34 310 2.4E-65 T 14-10-2018 IPR025997 Periplasmic binding protein DB29_01192 b5f5266687170700e61c403924383d77 272 Gene3D G3DSA:1.10.490.10 2 136 2.2E-12 T 14-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 DB29_01192 b5f5266687170700e61c403924383d77 272 SUPERFAMILY SSF52091 150 254 8.44E-17 T 14-10-2018 IPR036513 STAS domain superfamily DB29_01192 b5f5266687170700e61c403924383d77 272 ProDom PD936484 POLYPROTEIN GLYCOPROTEIN M G2 TRANSMEMBRANE NONSTRUCTURAL MEMBRANE CONTAINS: PRECURSOR SIGNAL 1 135 2.0E-77 T 14-10-2018 DB29_01192 b5f5266687170700e61c403924383d77 272 Pfam PF08678 Rsbr N terminal 10 136 7.9E-38 T 14-10-2018 IPR014792 RsbS co-antagonist protein RsbRA N-terminal domain DB29_01192 b5f5266687170700e61c403924383d77 272 Pfam PF01740 STAS domain 155 244 4.9E-13 T 14-10-2018 IPR002645 STAS domain DB29_01192 b5f5266687170700e61c403924383d77 272 Gene3D G3DSA:3.30.750.24 148 266 5.1E-36 T 14-10-2018 IPR036513 STAS domain superfamily DB29_02933 c885ba5eb6e706116454cfe1892211db 419 Pfam PF03611 PTS system sugar-specific permease component 11 393 8.4E-90 T 14-10-2018 IPR004703 Phosphotransferase system, sugar-specific permease component GO:0009401|GO:0016021 DB29_02933 c885ba5eb6e706116454cfe1892211db 419 PIRSF PIRSF006304 4 419 4.5E-165 T 14-10-2018 IPR013853 Galactitol permease IIC component GO:0015577|GO:0015796 DB29_02933 c885ba5eb6e706116454cfe1892211db 419 TIGRFAM TIGR00827 EIIC-GAT: PTS system, galactitol-specific IIC component 11 415 1.0E-199 T 14-10-2018 IPR013853 Galactitol permease IIC component GO:0015577|GO:0015796 DB29_02180 4e714115775bf60b646d14c7e1824d1a 443 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 10 31 1.5E-13 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 DB29_02180 4e714115775bf60b646d14c7e1824d1a 443 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 39 58 1.5E-13 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 DB29_02180 4e714115775bf60b646d14c7e1824d1a 443 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 85 111 1.5E-13 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 DB29_02180 4e714115775bf60b646d14c7e1824d1a 443 SUPERFAMILY SSF161070 3 442 3.01E-124 T 14-10-2018 IPR037272 Sodium:neurotransmitter symporter superfamily GO:0005328 DB29_02180 4e714115775bf60b646d14c7e1824d1a 443 Pfam PF00209 Sodium:neurotransmitter symporter family 145 440 3.8E-31 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 DB29_02180 4e714115775bf60b646d14c7e1824d1a 443 Pfam PF00209 Sodium:neurotransmitter symporter family 3 117 1.9E-23 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 DB29_02180 4e714115775bf60b646d14c7e1824d1a 443 ProSitePatterns PS00610 Sodium:neurotransmitter symporter family signature 1. 26 40 - T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 DB29_03644 4d8918c4f3efc9c5cf1071947fee8f3c 172 Pfam PF01965 DJ-1/PfpI family 3 167 8.3E-54 T 14-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 DB29_03644 4d8918c4f3efc9c5cf1071947fee8f3c 172 SUPERFAMILY SSF52317 1 170 8.46E-48 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like DB29_03644 4d8918c4f3efc9c5cf1071947fee8f3c 172 Gene3D G3DSA:3.40.50.880 1 171 1.8E-53 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like DB29_03644 4d8918c4f3efc9c5cf1071947fee8f3c 172 TIGRFAM TIGR01382 PfpI: intracellular protease, PfpI family 4 170 1.8E-59 T 14-10-2018 IPR006286 Deglycase PfpI DB29_01507 b6f5cae5b19ccb8a1368ca2e3ff1c21c 344 Pfam PF01965 DJ-1/PfpI family 3 182 1.5E-14 T 14-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 DB29_01507 b6f5cae5b19ccb8a1368ca2e3ff1c21c 344 Gene3D G3DSA:3.40.50.880 1 231 7.1E-44 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like DB29_01507 b6f5cae5b19ccb8a1368ca2e3ff1c21c 344 SUPERFAMILY SSF52317 1 200 8.21E-30 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like DB29_01564 88386b42d80c340c3403a302738a0374 210 Pfam PF00805 Pentapeptide repeats (8 copies) 147 181 7.5E-10 T 14-10-2018 IPR001646 Pentapeptide repeat DB29_01564 88386b42d80c340c3403a302738a0374 210 SUPERFAMILY SSF141571 123 199 1.7E-17 T 14-10-2018 DB29_01564 88386b42d80c340c3403a302738a0374 210 Gene3D G3DSA:2.160.20.80 105 197 6.1E-18 T 14-10-2018 DB29_03412 d290f772cde9d20738816b2a3aafa267 317 Pfam PF01032 FecCD transport family 35 312 9.5E-54 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 DB29_03412 d290f772cde9d20738816b2a3aafa267 317 Gene3D G3DSA:1.10.3470.10 4 317 5.1E-56 T 14-10-2018 IPR037294 ABC transporter, BtuC-like DB29_03412 d290f772cde9d20738816b2a3aafa267 317 SUPERFAMILY SSF81345 5 312 5.89E-59 T 14-10-2018 IPR037294 ABC transporter, BtuC-like DB29_01538 14c170026f47e6f8944ac1918bfc19fc 252 SUPERFAMILY SSF53335 19 218 5.78E-34 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DB29_01538 14c170026f47e6f8944ac1918bfc19fc 252 Pfam PF08241 Methyltransferase domain 44 136 6.8E-20 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 DB29_01538 14c170026f47e6f8944ac1918bfc19fc 252 Gene3D G3DSA:3.40.50.150 20 252 5.1E-43 T 14-10-2018 DB29_01057 31ac2cb3f6f30f0b4158efa8a42295a4 144 Gene3D G3DSA:3.10.180.10 5 126 6.2E-13 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DB29_01057 31ac2cb3f6f30f0b4158efa8a42295a4 144 SUPERFAMILY SSF54593 8 124 4.56E-15 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DB29_03365 871957a24beb7e88ceb2f9cc4da1e88e 544 ProSitePatterns PS01081 TetR-type HTH domain signature. 26 57 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site DB29_03365 871957a24beb7e88ceb2f9cc4da1e88e 544 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 60 1.3E-16 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DB29_03365 871957a24beb7e88ceb2f9cc4da1e88e 544 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 191 476 2.9E-35 T 14-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 DB29_03365 871957a24beb7e88ceb2f9cc4da1e88e 544 SUPERFAMILY SSF46689 6 66 3.03E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DB29_03365 871957a24beb7e88ceb2f9cc4da1e88e 544 Gene3D G3DSA:3.50.50.100 189 544 3.9E-75 T 14-10-2018 DB29_03365 871957a24beb7e88ceb2f9cc4da1e88e 544 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 455 462 5.9E-6 T 14-10-2018 DB29_03365 871957a24beb7e88ceb2f9cc4da1e88e 544 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 332 357 5.9E-6 T 14-10-2018 DB29_03365 871957a24beb7e88ceb2f9cc4da1e88e 544 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 192 214 5.9E-6 T 14-10-2018 DB29_03365 871957a24beb7e88ceb2f9cc4da1e88e 544 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 35 58 6.1E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DB29_03365 871957a24beb7e88ceb2f9cc4da1e88e 544 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 14 27 6.1E-8 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DB29_03365 871957a24beb7e88ceb2f9cc4da1e88e 544 Gene3D G3DSA:1.10.357.10 4 186 3.9E-26 T 14-10-2018 DB29_03365 871957a24beb7e88ceb2f9cc4da1e88e 544 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 193 212 9.9E-7 T 14-10-2018 DB29_03365 871957a24beb7e88ceb2f9cc4da1e88e 544 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 332 350 9.9E-7 T 14-10-2018 DB29_03365 871957a24beb7e88ceb2f9cc4da1e88e 544 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 440 462 9.9E-7 T 14-10-2018 DB29_03365 871957a24beb7e88ceb2f9cc4da1e88e 544 SUPERFAMILY SSF51905 190 493 1.49E-27 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB29_00870 e784971a2c2a8c62ab161ba6f6de82f7 344 SUPERFAMILY SSF53850 158 286 7.06E-7 T 14-10-2018 DB29_00870 e784971a2c2a8c62ab161ba6f6de82f7 344 Gene3D G3DSA:3.40.190.170 31 337 2.2E-82 T 14-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily DB29_00870 e784971a2c2a8c62ab161ba6f6de82f7 344 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 45 320 6.3E-67 T 14-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 DB29_02989 3671f73557640cb54105a32145c53bcb 296 Pfam PF02567 Phenazine biosynthesis-like protein 9 287 1.2E-73 T 14-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 DB29_02989 3671f73557640cb54105a32145c53bcb 296 Gene3D G3DSA:3.10.310.10 129 283 4.9E-36 T 14-10-2018 DB29_02989 3671f73557640cb54105a32145c53bcb 296 SUPERFAMILY SSF54506 4 290 7.29E-62 T 14-10-2018 DB29_02989 3671f73557640cb54105a32145c53bcb 296 Gene3D G3DSA:3.10.310.10 1 128 1.8E-38 T 14-10-2018 DB29_02989 3671f73557640cb54105a32145c53bcb 296 PIRSF PIRSF016184 1 294 1.9E-80 T 14-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 DB29_02989 3671f73557640cb54105a32145c53bcb 296 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 3 289 2.2E-91 T 14-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 DB29_02716 632249bef745d13869c459532a2cb08c 129 SUPERFAMILY SSF102546 1 129 2.35E-42 T 14-10-2018 IPR023750 RbsD-like superfamily GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 DB29_02716 632249bef745d13869c459532a2cb08c 129 Pfam PF05025 RbsD / FucU transport protein family 1 128 1.6E-46 T 14-10-2018 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 DB29_02716 632249bef745d13869c459532a2cb08c 129 Hamap MF_01661 D-ribose pyranase [rbsD]. 1 129 31.574 T 14-10-2018 IPR023064 D-ribose pyranase GO:0016872 DB29_02716 632249bef745d13869c459532a2cb08c 129 Gene3D G3DSA:3.40.1650.10 8 125 3.3E-38 T 14-10-2018 IPR023750 RbsD-like superfamily GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 DB29_03215 487b392854d6a684a86f64508a11bd01 144 Pfam PF05130 FlgN protein 2 130 7.0E-19 T 14-10-2018 IPR007809 FlgN-like protein GO:0005515|GO:0044780 DB29_03215 487b392854d6a684a86f64508a11bd01 144 SUPERFAMILY SSF140566 8 118 2.88E-12 T 14-10-2018 IPR036679 FlgN-like superfamily GO:0005515|GO:0044780 DB29_03148 1b0ee42192da46985020a79316df13f2 219 SUPERFAMILY SSF52172 1 132 2.42E-36 T 14-10-2018 IPR011006 CheY-like superfamily DB29_03148 1b0ee42192da46985020a79316df13f2 219 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 164 180 3.8E-15 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DB29_03148 1b0ee42192da46985020a79316df13f2 219 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 180 192 3.8E-15 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DB29_03148 1b0ee42192da46985020a79316df13f2 219 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 150 164 3.8E-15 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DB29_03148 1b0ee42192da46985020a79316df13f2 219 SMART SM00448 1 114 4.8E-35 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DB29_03148 1b0ee42192da46985020a79316df13f2 219 Gene3D G3DSA:3.40.50.12740 1 210 2.6E-72 T 14-10-2018 DB29_03148 1b0ee42192da46985020a79316df13f2 219 Pfam PF00196 Bacterial regulatory proteins, luxR family 149 204 1.9E-21 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DB29_03148 1b0ee42192da46985020a79316df13f2 219 SUPERFAMILY SSF46894 133 210 8.16E-22 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DB29_03148 1b0ee42192da46985020a79316df13f2 219 SMART SM00421 147 204 9.1E-26 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DB29_03148 1b0ee42192da46985020a79316df13f2 219 ProSitePatterns PS00622 LuxR-type HTH domain signature. 164 191 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DB29_03148 1b0ee42192da46985020a79316df13f2 219 Pfam PF00072 Response regulator receiver domain 3 114 5.4E-28 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DB29_01247 96f6d543ec64ee11d2a6f81e5217c34b 269 Pfam PF03741 Integral membrane protein TerC family 15 208 5.1E-50 T 14-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 DB29_01247 96f6d543ec64ee11d2a6f81e5217c34b 269 TIGRFAM TIGR03716 R_switched_YkoY: integral membrane protein, YkoY family 12 248 2.6E-92 T 14-10-2018 IPR022493 Integral membrane YkoY DB29_04360 746b2ec677a7f0e14e31a62127264e9d 506 SUPERFAMILY SSF53067 249 494 1.88E-61 T 14-10-2018 DB29_04360 746b2ec677a7f0e14e31a62127264e9d 506 Gene3D G3DSA:3.30.420.40 248 506 6.6E-82 T 14-10-2018 DB29_04360 746b2ec677a7f0e14e31a62127264e9d 506 Gene3D G3DSA:3.30.420.40 1 247 2.0E-68 T 14-10-2018 DB29_04360 746b2ec677a7f0e14e31a62127264e9d 506 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 256 448 1.6E-36 T 14-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 DB29_04360 746b2ec677a7f0e14e31a62127264e9d 506 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 361 381 - T 14-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 DB29_04360 746b2ec677a7f0e14e31a62127264e9d 506 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 2 246 6.8E-59 T 14-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 DB29_04360 746b2ec677a7f0e14e31a62127264e9d 506 SUPERFAMILY SSF53067 2 247 1.89E-60 T 14-10-2018 DB29_04360 746b2ec677a7f0e14e31a62127264e9d 506 PIRSF PIRSF000538 1 501 4.1E-130 T 14-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 DB29_00268 0fddd46f1ce809f44e8163e4a4353d0b 209 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 4 205 30.342 T 14-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 DB29_00268 0fddd46f1ce809f44e8163e4a4353d0b 209 SUPERFAMILY SSF51391 3 204 7.72E-70 T 14-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 DB29_00268 0fddd46f1ce809f44e8163e4a4353d0b 209 Pfam PF02581 Thiamine monophosphate synthase 6 187 4.9E-71 T 14-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 DB29_00268 0fddd46f1ce809f44e8163e4a4353d0b 209 Gene3D G3DSA:3.20.20.70 1 208 2.1E-76 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DB29_00268 0fddd46f1ce809f44e8163e4a4353d0b 209 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 5 199 4.4E-75 T 14-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 DB29_00312 eb2434e63bec3bad112611d9eb31c8a6 127 PRINTS PR00605 Class IC cytochrome C signature 60 71 1.5E-7 T 14-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 DB29_00312 eb2434e63bec3bad112611d9eb31c8a6 127 PRINTS PR00605 Class IC cytochrome C signature 100 122 1.5E-7 T 14-10-2018 IPR008168 Cytochrome c, class IC GO:0005506|GO:0009055 DB29_00312 eb2434e63bec3bad112611d9eb31c8a6 127 PIRSF PIRSF000025 1 126 9.5E-28 T 14-10-2018 IPR012218 Cytochrome c, Bacillus subtilis c550-related GO:0005506|GO:0009055|GO:0016021|GO:0020037 DB29_00312 eb2434e63bec3bad112611d9eb31c8a6 127 SUPERFAMILY SSF46626 10 125 1.75E-20 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DB29_00312 eb2434e63bec3bad112611d9eb31c8a6 127 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 52 122 2.8E-14 T 14-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DB29_00312 eb2434e63bec3bad112611d9eb31c8a6 127 Gene3D G3DSA:1.10.760.10 53 125 9.7E-18 T 14-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 DB29_03392 3da1f33ecb3a3994683dc0024de01d1b 395 SUPERFAMILY SSF53383 11 391 5.85E-120 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DB29_03392 3da1f33ecb3a3994683dc0024de01d1b 395 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 238 251 - T 14-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 DB29_03392 3da1f33ecb3a3994683dc0024de01d1b 395 Gene3D G3DSA:3.40.640.10 67 288 1.5E-129 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DB29_03392 3da1f33ecb3a3994683dc0024de01d1b 395 Gene3D G3DSA:3.90.1150.10 36 384 1.5E-129 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DB29_03392 3da1f33ecb3a3994683dc0024de01d1b 395 Pfam PF00155 Aminotransferase class I and II 36 385 2.6E-68 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 DB29_01211 7ce2d47e500f420bb0b4b1e3639c88af 130 Pfam PF03334 Na+/H+ antiporter subunit 14 95 7.3E-25 T 14-10-2018 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:1902600 DB29_01211 7ce2d47e500f420bb0b4b1e3639c88af 130 TIGRFAM TIGR01300 CPA3_mnhG_phaG: monovalent cation/proton antiporter, MnhG/PhaG subunit 13 109 4.0E-29 T 14-10-2018 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:1902600 DB29_03586 dafe1aeea062271a38e313375cb84b27 140 Gene3D G3DSA:3.30.1380.20 1 136 7.9E-41 T 14-10-2018 DB29_03586 dafe1aeea062271a38e313375cb84b27 140 Pfam PF10702 Protein of unknown function (DUF2507) 14 128 3.0E-39 T 14-10-2018 IPR019642 Protein of unknown function DUF2507 DB29_03586 dafe1aeea062271a38e313375cb84b27 140 SUPERFAMILY SSF111126 14 119 2.2E-21 T 14-10-2018 IPR024096 NO signalling/Golgi transport ligand-binding domain superfamily DB29_01112 72e486d598f7d58fbf5299231599f7c3 228 Hamap MF_02088 Probable queuosine precursor transporter. 26 226 16.465 T 14-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 DB29_01112 72e486d598f7d58fbf5299231599f7c3 228 TIGRFAM TIGR00697 TIGR00697: conserved hypothetical integral membrane protein 26 220 1.1E-61 T 14-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 DB29_01112 72e486d598f7d58fbf5299231599f7c3 228 Pfam PF02592 Putative vitamin uptake transporter 57 217 1.3E-47 T 14-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 DB29_02300 332150dd22d92199f33d532f23b56cde 275 ProSitePatterns PS01330 Polyamine biosynthesis (PABS) domain signature. 79 92 - T 14-10-2018 IPR030373 Polyamine biosynthesis domain, conserved site KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 DB29_02300 332150dd22d92199f33d532f23b56cde 275 Pfam PF17284 Spermidine synthase tetramerisation domain 4 55 2.0E-20 T 14-10-2018 IPR035246 Spermidine synthase, tetramerisation domain KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 DB29_02300 332150dd22d92199f33d532f23b56cde 275 Gene3D G3DSA:3.40.50.150 53 274 1.6E-77 T 14-10-2018 DB29_02300 332150dd22d92199f33d532f23b56cde 275 Gene3D G3DSA:2.30.140.10 1 52 7.5E-24 T 14-10-2018 IPR037163 Spermidine synthase, tetramerisation domain superfamily KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 DB29_02300 332150dd22d92199f33d532f23b56cde 275 Pfam PF01564 Spermine/spermidine synthase domain 58 236 4.8E-71 T 14-10-2018 DB29_02300 332150dd22d92199f33d532f23b56cde 275 Hamap MF_00198 Polyamine aminopropyltransferase [speE]. 3 275 42.019 T 14-10-2018 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 DB29_02300 332150dd22d92199f33d532f23b56cde 275 SUPERFAMILY SSF53335 2 274 2.66E-89 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DB29_02300 332150dd22d92199f33d532f23b56cde 275 TIGRFAM TIGR00417 speE: spermidine synthase 4 269 4.6E-123 T 14-10-2018 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 DB29_03587 41a661d8916181014bee600a4d86b642 451 Pfam PF02386 Cation transport protein 5 437 3.3E-58 T 14-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 DB29_02628 1b14be9dcf23200c87f3d1a17dc2d0bf 693 Pfam PF09700 CRISPR-associated protein (Cas_Cmr3) 409 552 7.2E-5 T 14-10-2018 IPR019117 CRISPR-associated protein, Cmr3 DB29_00485 2150d058d1fb9feb806845c4ee150483 715 Pfam PF00912 Transglycosylase 52 226 1.3E-63 T 14-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DB29_00485 2150d058d1fb9feb806845c4ee150483 715 Gene3D G3DSA:3.90.1310.20 47 501 4.2E-186 T 14-10-2018 DB29_00485 2150d058d1fb9feb806845c4ee150483 715 SUPERFAMILY SSF53955 40 252 6.19E-75 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily DB29_00485 2150d058d1fb9feb806845c4ee150483 715 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 62 594 2.5E-178 T 14-10-2018 DB29_00485 2150d058d1fb9feb806845c4ee150483 715 Gene3D G3DSA:3.40.710.10 292 608 4.2E-186 T 14-10-2018 DB29_00485 2150d058d1fb9feb806845c4ee150483 715 Gene3D G3DSA:1.10.3810.10 62 251 4.2E-186 T 14-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DB29_00485 2150d058d1fb9feb806845c4ee150483 715 SUPERFAMILY SSF56601 208 610 5.45E-99 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like DB29_00485 2150d058d1fb9feb806845c4ee150483 715 Pfam PF00905 Penicillin binding protein transpeptidase domain 320 590 4.6E-39 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 DB29_03343 6fa4b1dbcc178b390d690b07a0b890ad 283 Gene3D G3DSA:3.20.20.410 1 283 2.0E-95 T 14-10-2018 IPR036520 UPF0759 superfamily DB29_03343 6fa4b1dbcc178b390d690b07a0b890ad 283 SUPERFAMILY SSF117396 2 270 1.44E-84 T 14-10-2018 IPR036520 UPF0759 superfamily DB29_03343 6fa4b1dbcc178b390d690b07a0b890ad 283 Pfam PF01904 Protein of unknown function DUF72 17 267 1.4E-61 T 14-10-2018 IPR002763 Protein of unknown function DUF72 DB29_00805 6063a5aecf35c7952504227f13169724 261 SUPERFAMILY SSF47240 1 236 2.33E-79 T 14-10-2018 IPR009078 Ferritin-like superfamily DB29_00805 6063a5aecf35c7952504227f13169724 261 Gene3D G3DSA:3.30.1530.10 171 234 1.1E-12 T 14-10-2018 IPR027407 Manganese catalase, C-terminal DB29_00805 6063a5aecf35c7952504227f13169724 261 Pfam PF05067 Manganese containing catalase 1 234 1.1E-99 T 14-10-2018 IPR007760 Manganese catalase DB29_00805 6063a5aecf35c7952504227f13169724 261 Gene3D G3DSA:1.20.1260.10 1 160 6.3E-54 T 14-10-2018 IPR012347 Ferritin-like DB29_03469 d22091b6c857dcff45bf8c6f2a011527 294 SUPERFAMILY SSF56112 29 257 3.76E-31 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily DB29_03469 d22091b6c857dcff45bf8c6f2a011527 294 Pfam PF01636 Phosphotransferase enzyme family 70 245 2.2E-19 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase DB29_03469 d22091b6c857dcff45bf8c6f2a011527 294 Gene3D G3DSA:3.90.1200.10 104 291 2.3E-17 T 14-10-2018 DB29_01089 3cf76e88e6bc12aa2604e28ef41a1d92 268 SUPERFAMILY SSF56784 1 249 4.99E-24 T 14-10-2018 IPR036412 HAD-like superfamily DB29_01089 3cf76e88e6bc12aa2604e28ef41a1d92 268 Gene3D G3DSA:3.40.50.1000 139 267 4.6E-22 T 14-10-2018 IPR023214 HAD superfamily DB29_01089 3cf76e88e6bc12aa2604e28ef41a1d92 268 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 244 9.1E-13 T 14-10-2018 DB29_02707 a54d778f26bc8453fb1056fd3976bedd 126 SUPERFAMILY SSF140931 67 118 3.92E-7 T 14-10-2018 IPR036597 Fido-like domain superfamily DB29_02707 a54d778f26bc8453fb1056fd3976bedd 126 Gene3D G3DSA:1.10.3290.10 1 121 1.6E-30 T 14-10-2018 IPR036597 Fido-like domain superfamily DB29_03835 e0b0ad7874ee59ad29df59b680e0faf1 339 Pfam PF01966 HD domain 122 234 7.2E-12 T 14-10-2018 IPR006674 HD domain DB29_03835 e0b0ad7874ee59ad29df59b680e0faf1 339 SMART SM00471 117 245 4.7E-5 T 14-10-2018 IPR003607 HD/PDEase domain DB29_03835 e0b0ad7874ee59ad29df59b680e0faf1 339 SUPERFAMILY SSF109604 108 269 5.03E-20 T 14-10-2018 DB29_03835 e0b0ad7874ee59ad29df59b680e0faf1 339 Gene3D G3DSA:1.10.3210.10 2 275 2.0E-38 T 14-10-2018 DB29_01267 71ac60b3adf66e34fb762992d7b0d9b4 426 Gene3D G3DSA:3.40.640.10 60 304 1.8E-182 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DB29_01267 71ac60b3adf66e34fb762992d7b0d9b4 426 Gene3D G3DSA:3.90.1150.10 21 418 1.8E-182 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DB29_01267 71ac60b3adf66e34fb762992d7b0d9b4 426 Pfam PF12897 Alanine-glyoxylate amino-transferase 10 424 2.1E-183 T 14-10-2018 IPR024551 Aminotransferase, putative DB29_01267 71ac60b3adf66e34fb762992d7b0d9b4 426 SUPERFAMILY SSF53383 39 412 2.7E-46 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DB29_01232 49f1876748eb6c746ff24c63a88085ad 211 SUPERFAMILY SSF161098 9 195 2.22E-43 T 14-10-2018 IPR035906 MetI-like superfamily DB29_01232 49f1876748eb6c746ff24c63a88085ad 211 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 32 207 3.1E-17 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DB29_01232 49f1876748eb6c746ff24c63a88085ad 211 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 10 101 3.5E-20 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 DB29_01232 49f1876748eb6c746ff24c63a88085ad 211 Gene3D G3DSA:1.10.3720.10 2 209 1.2E-51 T 14-10-2018 IPR035906 MetI-like superfamily DB29_03200 20f9651ac0fedfaf723834b0bb5431ad 343 Pfam PF00005 ABC transporter 27 185 2.3E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB29_03200 20f9651ac0fedfaf723834b0bb5431ad 343 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 237 294 3.2E-14 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DB29_03200 20f9651ac0fedfaf723834b0bb5431ad 343 Gene3D G3DSA:3.40.50.300 5 336 4.0E-94 T 14-10-2018 DB29_03200 20f9651ac0fedfaf723834b0bb5431ad 343 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 235 321 1.5E-21 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DB29_03200 20f9651ac0fedfaf723834b0bb5431ad 343 SUPERFAMILY SSF52540 7 257 1.65E-68 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_03200 20f9651ac0fedfaf723834b0bb5431ad 343 ProSitePatterns PS00211 ABC transporters family signature. 158 172 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB29_03200 20f9651ac0fedfaf723834b0bb5431ad 343 SMART SM00382 36 235 6.6E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_03143 49cef59b7c8a8f1f2d195dec1f9afdca 304 Gene3D G3DSA:1.10.10.10 2 62 3.7E-12 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_03143 49cef59b7c8a8f1f2d195dec1f9afdca 304 Pfam PF08279 HTH domain 5 57 1.7E-11 T 14-10-2018 IPR013196 Helix-turn-helix, type 11 DB29_03143 49cef59b7c8a8f1f2d195dec1f9afdca 304 Pfam PF13280 WYL domain 132 297 3.3E-31 T 14-10-2018 IPR026881 WYL domain DB29_03143 49cef59b7c8a8f1f2d195dec1f9afdca 304 SUPERFAMILY SSF46785 4 56 1.5E-8 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_03143 49cef59b7c8a8f1f2d195dec1f9afdca 304 PIRSF PIRSF016838 77 303 1.6E-23 T 14-10-2018 IPR028349 Protein PafC DB29_03143 49cef59b7c8a8f1f2d195dec1f9afdca 304 PIRSF PIRSF016838 1 51 0.23 T 14-10-2018 IPR028349 Protein PafC DB29_02880 a0cdb7f85b40e1416b38dc5f3fff66c6 368 Pfam PF00296 Luciferase-like monooxygenase 16 334 6.0E-81 T 14-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 DB29_02880 a0cdb7f85b40e1416b38dc5f3fff66c6 368 Gene3D G3DSA:3.20.20.30 2 366 5.3E-112 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 DB29_02880 a0cdb7f85b40e1416b38dc5f3fff66c6 368 SUPERFAMILY SSF51679 20 361 1.44E-82 T 14-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 DB29_04152 843f49ac256d32e84298f28289f8ebdb 204 Pfam PF00510 Cytochrome c oxidase subunit III 25 200 1.9E-16 T 14-10-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DB29_04152 843f49ac256d32e84298f28289f8ebdb 204 Gene3D G3DSA:1.20.120.80 18 201 6.7E-54 T 14-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DB29_04152 843f49ac256d32e84298f28289f8ebdb 204 SUPERFAMILY SSF81452 19 200 8.11E-56 T 14-10-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DB29_04152 843f49ac256d32e84298f28289f8ebdb 204 TIGRFAM TIGR02897 QoxC: cytochrome aa3 quinol oxidase, subunit III 14 201 1.6E-85 T 14-10-2018 IPR014246 Quinol oxidase subunit III GO:0015002|GO:0016021|GO:0042773 DB29_02667 9852a84b2ebd635501e591d738e5132f 567 SMART SM00387 459 560 4.4E-8 T 14-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase DB29_02667 9852a84b2ebd635501e591d738e5132f 567 Pfam PF06580 Histidine kinase 369 447 3.4E-26 T 14-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 DB29_02667 9852a84b2ebd635501e591d738e5132f 567 Gene3D G3DSA:3.30.565.10 399 562 4.7E-21 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB29_02667 9852a84b2ebd635501e591d738e5132f 567 SUPERFAMILY SSF55874 424 556 1.01E-17 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB29_01031 5508406ec55edb1cdacd640f63e0b871 306 Gene3D G3DSA:3.90.1200.10 94 282 4.6E-26 T 14-10-2018 DB29_01031 5508406ec55edb1cdacd640f63e0b871 306 SUPERFAMILY SSF56112 12 256 3.51E-37 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily DB29_01031 5508406ec55edb1cdacd640f63e0b871 306 Pfam PF01636 Phosphotransferase enzyme family 18 217 1.1E-24 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase DB29_01377 90d0518020eaf9cc6ecdbf094305e988 408 SUPERFAMILY SSF103473 5 405 6.54E-69 T 14-10-2018 IPR036259 MFS transporter superfamily DB29_01377 90d0518020eaf9cc6ecdbf094305e988 408 Pfam PF07690 Major Facilitator Superfamily 15 274 4.9E-36 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DB29_01377 90d0518020eaf9cc6ecdbf094305e988 408 Gene3D G3DSA:1.20.1250.20 3 203 4.7E-34 T 14-10-2018 DB29_01377 90d0518020eaf9cc6ecdbf094305e988 408 Gene3D G3DSA:1.20.1250.20 215 408 1.1E-25 T 14-10-2018 DB29_03154 474e306af2177379cd23902ed56af05d 169 Gene3D G3DSA:1.10.10.10 1 149 1.8E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_03154 474e306af2177379cd23902ed56af05d 169 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 135 3.0E-26 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type DB29_03154 474e306af2177379cd23902ed56af05d 169 Pfam PF02082 Transcriptional regulator 1 83 4.3E-24 T 14-10-2018 IPR000944 Transcription regulator Rrf2-type DB29_03154 474e306af2177379cd23902ed56af05d 169 SUPERFAMILY SSF46785 3 138 7.13E-25 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_03605 b2c1d642f202ff972548e9beff61a1f2 136 Gene3D G3DSA:3.40.960.10 40 129 4.2E-5 T 14-10-2018 DB29_00871 315805f07c58d27d7aab217631df0647 283 SMART SM00342 197 280 3.4E-30 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DB29_00871 315805f07c58d27d7aab217631df0647 283 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 234 276 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 DB29_00871 315805f07c58d27d7aab217631df0647 283 Gene3D G3DSA:2.60.120.10 8 85 2.0E-8 T 14-10-2018 IPR014710 RmlC-like jelly roll fold DB29_00871 315805f07c58d27d7aab217631df0647 283 Gene3D G3DSA:1.10.10.60 181 230 3.5E-13 T 14-10-2018 DB29_00871 315805f07c58d27d7aab217631df0647 283 SUPERFAMILY SSF51215 31 113 8.76E-13 T 14-10-2018 IPR037923 Transcription regulator HTH-like DB29_00871 315805f07c58d27d7aab217631df0647 283 Pfam PF12833 Helix-turn-helix domain 203 281 2.4E-23 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DB29_00871 315805f07c58d27d7aab217631df0647 283 Gene3D G3DSA:1.10.10.60 231 283 3.2E-18 T 14-10-2018 DB29_00871 315805f07c58d27d7aab217631df0647 283 Pfam PF02311 AraC-like ligand binding domain 27 139 7.6E-11 T 14-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 DB29_00871 315805f07c58d27d7aab217631df0647 283 SUPERFAMILY SSF46689 182 230 2.62E-7 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DB29_00871 315805f07c58d27d7aab217631df0647 283 SUPERFAMILY SSF46689 234 282 1.0E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DB29_02702 2f1545f2540d63ea126f4c7323ffa3a7 280 Pfam PF12836 Helix-hairpin-helix motif 220 273 1.3E-11 T 14-10-2018 DB29_02702 2f1545f2540d63ea126f4c7323ffa3a7 280 SUPERFAMILY SSF47781 205 277 3.11E-13 T 14-10-2018 IPR010994 RuvA domain 2-like DB29_02702 2f1545f2540d63ea126f4c7323ffa3a7 280 Gene3D G3DSA:1.10.150.320 200 274 1.6E-15 T 14-10-2018 DB29_00016 2b0a02a0b363ae1749c67d5ed8d4312a 170 Gene3D G3DSA:1.10.10.10 4 86 2.4E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_00016 2b0a02a0b363ae1749c67d5ed8d4312a 170 Pfam PF03551 Transcriptional regulator PadR-like family 9 78 1.5E-16 T 14-10-2018 IPR005149 Transcription regulator PadR, N-terminal DB29_00016 2b0a02a0b363ae1749c67d5ed8d4312a 170 Pfam PF10400 Virulence activator alpha C-term 92 170 1.5E-15 T 14-10-2018 IPR018309 Transcription regulator PadR, C-terminal DB29_00016 2b0a02a0b363ae1749c67d5ed8d4312a 170 SUPERFAMILY SSF46785 6 169 2.73E-37 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_03377 299a9fb3a1b27b05185926214b44350d 143 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 47 63 - T 14-10-2018 IPR002178 PTS EIIA type-2 domain DB29_03377 299a9fb3a1b27b05185926214b44350d 143 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 3 139 5.4E-35 T 14-10-2018 IPR002178 PTS EIIA type-2 domain DB29_03377 299a9fb3a1b27b05185926214b44350d 143 SUPERFAMILY SSF55804 2 140 3.53E-40 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 DB29_03377 299a9fb3a1b27b05185926214b44350d 143 Gene3D G3DSA:3.40.930.10 1 140 3.0E-41 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 DB29_03834 346383b9f1fbd8d3ed3e25fe2eeaade2 366 Gene3D G3DSA:2.30.30.60 200 249 1.9E-14 T 14-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily DB29_03834 346383b9f1fbd8d3ed3e25fe2eeaade2 366 SUPERFAMILY SSF82689 252 351 1.16E-16 T 14-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 DB29_03834 346383b9f1fbd8d3ed3e25fe2eeaade2 366 SUPERFAMILY SSF50182 185 250 3.11E-18 T 14-10-2018 IPR010920 LSM domain superfamily DB29_03834 346383b9f1fbd8d3ed3e25fe2eeaade2 366 Pfam PF00924 Mechanosensitive ion channel 142 343 1.4E-64 T 14-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 DB29_03834 346383b9f1fbd8d3ed3e25fe2eeaade2 366 SUPERFAMILY SSF82861 100 183 6.28E-12 T 14-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 DB29_03834 346383b9f1fbd8d3ed3e25fe2eeaade2 366 Gene3D G3DSA:3.30.70.100 251 347 2.1E-15 T 14-10-2018 DB29_01016 bd11c478cc496f6bdb71a6853fe7bf2c 185 SUPERFAMILY SSF52499 2 183 8.63E-46 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 DB29_01016 bd11c478cc496f6bdb71a6853fe7bf2c 185 Pfam PF00857 Isochorismatase family 6 167 3.1E-29 T 14-10-2018 IPR000868 Isochorismatase-like GO:0003824 DB29_01016 bd11c478cc496f6bdb71a6853fe7bf2c 185 Gene3D G3DSA:3.40.50.850 1 179 3.7E-44 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 DB29_00738 24072007cfe12c2443153f72ae27adb7 450 Pfam PF01554 MatE 25 186 2.5E-24 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 DB29_00738 24072007cfe12c2443153f72ae27adb7 450 Pfam PF01554 MatE 245 395 1.3E-13 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 DB29_00738 24072007cfe12c2443153f72ae27adb7 450 PIRSF PIRSF006603 2 448 1.2E-52 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 DB29_02696 639d586147f9a36155e291a62ce02159 190 Pfam PF02441 Flavoprotein 7 181 4.4E-35 T 14-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 DB29_02696 639d586147f9a36155e291a62ce02159 190 SUPERFAMILY SSF52507 4 182 5.89E-46 T 14-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 DB29_02696 639d586147f9a36155e291a62ce02159 190 Gene3D G3DSA:3.40.50.1950 3 190 7.4E-47 T 14-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 DB29_00158 b77a82292e0e3d152433860112373672 177 SUPERFAMILY SSF52833 38 173 1.58E-37 T 14-10-2018 IPR036249 Thioredoxin-like superfamily DB29_00158 b77a82292e0e3d152433860112373672 177 ProSitePatterns PS00194 Thioredoxin family active site. 68 86 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 DB29_00158 b77a82292e0e3d152433860112373672 177 Gene3D G3DSA:3.40.30.10 30 175 1.4E-40 T 14-10-2018 DB29_00158 b77a82292e0e3d152433860112373672 177 Pfam PF00578 AhpC/TSA family 40 155 6.1E-29 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 DB29_03874 4ad1647153d27ccb2130f64c38734a64 445 Gene3D G3DSA:3.40.50.1010 3 152 1.7E-22 T 14-10-2018 DB29_03874 4ad1647153d27ccb2130f64c38734a64 445 SUPERFAMILY SSF88723 7 152 1.24E-8 T 14-10-2018 IPR029060 PIN-like domain superfamily DB29_03874 4ad1647153d27ccb2130f64c38734a64 445 Pfam PF02562 PhoH-like protein 236 439 4.5E-55 T 14-10-2018 IPR003714 PhoH-like protein GO:0005524 DB29_03874 4ad1647153d27ccb2130f64c38734a64 445 SUPERFAMILY SSF52540 143 425 8.46E-29 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_03874 4ad1647153d27ccb2130f64c38734a64 445 Pfam PF13638 PIN domain 8 150 9.9E-32 T 14-10-2018 IPR002716 PIN domain DB29_03874 4ad1647153d27ccb2130f64c38734a64 445 SMART SM00670 6 138 6.0E-18 T 14-10-2018 IPR002716 PIN domain DB29_03874 4ad1647153d27ccb2130f64c38734a64 445 Gene3D G3DSA:3.40.50.300 234 444 5.8E-69 T 14-10-2018 DB29_00152 5ac83e74fadd9bc26afc7694aa5ce18d 356 Pfam PF01032 FecCD transport family 26 345 5.1E-91 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 DB29_00152 5ac83e74fadd9bc26afc7694aa5ce18d 356 Gene3D G3DSA:1.10.3470.10 12 352 5.0E-100 T 14-10-2018 IPR037294 ABC transporter, BtuC-like DB29_00152 5ac83e74fadd9bc26afc7694aa5ce18d 356 SUPERFAMILY SSF81345 8 345 1.14E-81 T 14-10-2018 IPR037294 ABC transporter, BtuC-like DB29_00005 68d0f0afa26a5100a855d5b232255323 136 ProSitePatterns PS00893 Nudix box signature. 35 56 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 DB29_00005 68d0f0afa26a5100a855d5b232255323 136 PRINTS PR00502 NUDIX hydrolase family signature 30 44 2.3E-7 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 DB29_00005 68d0f0afa26a5100a855d5b232255323 136 PRINTS PR00502 NUDIX hydrolase family signature 44 59 2.3E-7 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 DB29_00005 68d0f0afa26a5100a855d5b232255323 136 SUPERFAMILY SSF55811 3 130 2.98E-30 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 DB29_00005 68d0f0afa26a5100a855d5b232255323 136 Pfam PF00293 NUDIX domain 4 113 8.1E-19 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 DB29_00005 68d0f0afa26a5100a855d5b232255323 136 Gene3D G3DSA:3.90.79.10 2 124 1.8E-29 T 14-10-2018 DB29_02573 e14971282e991fd2699367de4780aef9 365 SUPERFAMILY SSF48452 94 240 5.5E-12 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DB29_02573 e14971282e991fd2699367de4780aef9 365 Gene3D G3DSA:1.25.40.10 1 363 7.9E-76 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DB29_02690 8f0ea5dcd6e474ffd02e9b5f011438b1 41 Gene3D G3DSA:1.20.5.420 1 36 1.8E-5 T 14-10-2018 DB29_02690 8f0ea5dcd6e474ffd02e9b5f011438b1 41 SUPERFAMILY SSF47240 1 40 2.78E-7 T 14-10-2018 IPR009078 Ferritin-like superfamily DB29_04268 2e7bc9d7cdd1670bd4f25672a1acfb3b 246 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 6 211 9.2E-25 T 14-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 DB29_04268 2e7bc9d7cdd1670bd4f25672a1acfb3b 246 Gene3D G3DSA:3.40.50.1000 169 238 9.4E-35 T 14-10-2018 IPR023214 HAD superfamily DB29_04268 2e7bc9d7cdd1670bd4f25672a1acfb3b 246 ProSitePatterns PS01229 Hypothetical cof family signature 2. 192 214 - T 14-10-2018 DB29_04268 2e7bc9d7cdd1670bd4f25672a1acfb3b 246 Gene3D G3DSA:3.30.1240.10 84 116 1.1E-25 T 14-10-2018 DB29_04268 2e7bc9d7cdd1670bd4f25672a1acfb3b 246 Gene3D G3DSA:3.30.1240.10 126 168 9.4E-35 T 14-10-2018 DB29_04268 2e7bc9d7cdd1670bd4f25672a1acfb3b 246 Gene3D G3DSA:3.40.50.1000 5 83 1.1E-25 T 14-10-2018 IPR023214 HAD superfamily DB29_04268 2e7bc9d7cdd1670bd4f25672a1acfb3b 246 SUPERFAMILY SSF56784 1 242 2.23E-68 T 14-10-2018 IPR036412 HAD-like superfamily DB29_04268 2e7bc9d7cdd1670bd4f25672a1acfb3b 246 Pfam PF08282 haloacid dehalogenase-like hydrolase 7 117 1.8E-24 T 14-10-2018 DB29_04268 2e7bc9d7cdd1670bd4f25672a1acfb3b 246 Pfam PF08282 haloacid dehalogenase-like hydrolase 128 238 1.1E-30 T 14-10-2018 DB29_00114 a2fc4fc5ef486f3bc52cb99102621689 448 TIGRFAM TIGR02889 spore_YpeB: germination protein YpeB 3 441 7.0E-181 T 14-10-2018 IPR014239 Spore germination YpeB GO:0009847 DB29_00114 a2fc4fc5ef486f3bc52cb99102621689 448 Pfam PF14620 YpeB sporulation 13 375 4.1E-125 T 14-10-2018 IPR014239 Spore germination YpeB GO:0009847 DB29_00114 a2fc4fc5ef486f3bc52cb99102621689 448 Pfam PF03413 Peptidase propeptide and YPEB domain 378 438 2.4E-5 T 14-10-2018 IPR025711 PepSY domain DB29_04072 baf400a325f0309c043ad54c4d4d9422 237 Gene3D G3DSA:3.40.50.720 1 236 5.2E-63 T 14-10-2018 DB29_04072 baf400a325f0309c043ad54c4d4d9422 237 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 125 133 1.5E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_04072 baf400a325f0309c043ad54c4d4d9422 237 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 145 164 1.5E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_04072 baf400a325f0309c043ad54c4d4d9422 237 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 72 83 1.5E-5 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_04072 baf400a325f0309c043ad54c4d4d9422 237 SUPERFAMILY SSF51735 2 236 3.24E-64 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_04072 baf400a325f0309c043ad54c4d4d9422 237 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 8 235 4.5E-47 T 14-10-2018 DB29_04072 baf400a325f0309c043ad54c4d4d9422 237 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 132 160 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 DB29_04072 baf400a325f0309c043ad54c4d4d9422 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 145 164 8.6E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_04072 baf400a325f0309c043ad54c4d4d9422 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 166 183 8.6E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_04072 baf400a325f0309c043ad54c4d4d9422 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 119 135 8.6E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_04072 baf400a325f0309c043ad54c4d4d9422 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 8.6E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_04072 baf400a325f0309c043ad54c4d4d9422 237 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 199 219 8.6E-36 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_00679 1cabd43a2cc638d24b7af0996fd42beb 300 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 216 1.1E-18 T 14-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 DB29_00679 1cabd43a2cc638d24b7af0996fd42beb 300 Pfam PF08338 Domain of unknown function (DUF1731) 252 297 2.9E-14 T 14-10-2018 IPR013549 Domain of unknown function DUF1731 DB29_00679 1cabd43a2cc638d24b7af0996fd42beb 300 TIGRFAM TIGR01777 yfcH: TIGR01777 family protein 3 295 3.2E-104 T 14-10-2018 IPR010099 Epimerase family protein SDR39U1 DB29_00679 1cabd43a2cc638d24b7af0996fd42beb 300 Gene3D G3DSA:3.40.50.720 1 289 1.7E-69 T 14-10-2018 DB29_00679 1cabd43a2cc638d24b7af0996fd42beb 300 SUPERFAMILY SSF51735 1 279 1.17E-38 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_00225 e6c1fe25dc0040e14b1e93f9f441fd34 181 PIRSF PIRSF006707 1 181 9.4E-48 T 14-10-2018 IPR026282 DNA-binding protein, MJ1563 type DB29_00225 e6c1fe25dc0040e14b1e93f9f441fd34 181 Gene3D G3DSA:1.10.10.10 8 91 7.7E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_00225 e6c1fe25dc0040e14b1e93f9f441fd34 181 SUPERFAMILY SSF46785 9 163 1.06E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_00604 a5b2e733073f3c57c97c2a0509319734 201 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 24 179 4.2E-24 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 DB29_00604 a5b2e733073f3c57c97c2a0509319734 201 Gene3D G3DSA:3.40.50.1240 5 195 1.9E-31 T 14-10-2018 IPR029033 Histidine phosphatase superfamily DB29_00604 a5b2e733073f3c57c97c2a0509319734 201 SUPERFAMILY SSF53254 22 194 2.2E-32 T 14-10-2018 IPR029033 Histidine phosphatase superfamily DB29_00604 a5b2e733073f3c57c97c2a0509319734 201 SMART SM00855 23 164 8.9E-9 T 14-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 DB29_03706 5a62c0b13d1eead8724c134faee927d6 109 Pfam PF10815 ComZ 54 108 4.6E-30 T 14-10-2018 IPR024558 ComZ DB29_03706 5a62c0b13d1eead8724c134faee927d6 109 ProDom PD027277 REPRESSOR COMZ COMG OPERON TRANSCRIPTION POSSIBLE COMPETENCE PROTEIN-RELATED BH2888 REGULATION 53 109 6.0E-26 T 14-10-2018 IPR024558 ComZ DB29_04031 43ff41cd49bfc26cf122d3152090e3b5 204 SUPERFAMILY SSF103039 4 199 3.4E-31 T 14-10-2018 IPR028976 CheC-like superfamily DB29_04031 43ff41cd49bfc26cf122d3152090e3b5 204 Pfam PF04509 CheC-like family 106 135 4.4E-5 T 14-10-2018 IPR007597 CheC-like protein GO:0016787 DB29_04031 43ff41cd49bfc26cf122d3152090e3b5 204 Pfam PF04509 CheC-like family 9 37 2.5E-5 T 14-10-2018 IPR007597 CheC-like protein GO:0016787 DB29_04031 43ff41cd49bfc26cf122d3152090e3b5 204 Gene3D G3DSA:3.40.1550.10 2 199 3.0E-38 T 14-10-2018 IPR028976 CheC-like superfamily DB29_00709 91b10c6240136248f8ff041e08979e0f 455 SUPERFAMILY SSF161070 6 445 3.79E-124 T 14-10-2018 IPR037272 Sodium:neurotransmitter symporter superfamily GO:0005328 DB29_00709 91b10c6240136248f8ff041e08979e0f 455 ProSitePatterns PS00610 Sodium:neurotransmitter symporter family signature 1. 28 42 - T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 DB29_00709 91b10c6240136248f8ff041e08979e0f 455 Pfam PF00209 Sodium:neurotransmitter symporter family 5 122 9.5E-25 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 DB29_00709 91b10c6240136248f8ff041e08979e0f 455 Pfam PF00209 Sodium:neurotransmitter symporter family 151 444 4.4E-29 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 DB29_00709 91b10c6240136248f8ff041e08979e0f 455 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 12 33 7.3E-12 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 DB29_00709 91b10c6240136248f8ff041e08979e0f 455 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 87 113 7.3E-12 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 DB29_00709 91b10c6240136248f8ff041e08979e0f 455 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 41 60 7.3E-12 T 14-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 DB29_00229 ed0c704d9a7bd013ac696b7a7ed7b3f3 619 Gene3D G3DSA:3.60.20.10 5 187 5.9E-64 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DB29_00229 ed0c704d9a7bd013ac696b7a7ed7b3f3 619 Pfam PF13537 Glutamine amidotransferase domain 51 172 1.3E-48 T 14-10-2018 IPR017932 Glutamine amidotransferase type 2 domain DB29_00229 ed0c704d9a7bd013ac696b7a7ed7b3f3 619 SUPERFAMILY SSF56235 3 229 3.52E-65 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DB29_00229 ed0c704d9a7bd013ac696b7a7ed7b3f3 619 SUPERFAMILY SSF52402 232 577 4.97E-72 T 14-10-2018 DB29_00229 ed0c704d9a7bd013ac696b7a7ed7b3f3 619 PIRSF PIRSF001589 4 619 1.3E-142 T 14-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 DB29_00229 ed0c704d9a7bd013ac696b7a7ed7b3f3 619 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 5 537 3.4E-165 T 14-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 DB29_00229 ed0c704d9a7bd013ac696b7a7ed7b3f3 619 Pfam PF00733 Asparagine synthase 245 608 2.1E-90 T 14-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 DB29_03147 8375e23e45d939644abe7db442c7d603 120 SUPERFAMILY SSF54593 2 116 3.16E-16 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DB29_03147 8375e23e45d939644abe7db442c7d603 120 Gene3D G3DSA:3.10.180.10 1 120 5.3E-15 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DB29_03147 8375e23e45d939644abe7db442c7d603 120 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 2 64 2.6E-6 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain DB29_03627 18d8704fa3147f58cb8c9163a0cd7f64 377 TIGRFAM TIGR02907 spore_VI_D: stage VI sporulation protein D 9 373 4.0E-153 T 14-10-2018 IPR014256 Sporulation stage VI, protein D DB29_03627 18d8704fa3147f58cb8c9163a0cd7f64 377 Pfam PF01476 LysM domain 332 373 1.5E-6 T 14-10-2018 IPR018392 LysM domain DB29_03627 18d8704fa3147f58cb8c9163a0cd7f64 377 SMART SM00257 330 373 4.0E-5 T 14-10-2018 IPR018392 LysM domain DB29_03627 18d8704fa3147f58cb8c9163a0cd7f64 377 Gene3D G3DSA:3.10.350.10 321 377 1.6E-9 T 14-10-2018 IPR036779 LysM domain superfamily DB29_03627 18d8704fa3147f58cb8c9163a0cd7f64 377 SUPERFAMILY SSF54106 329 374 4.71E-8 T 14-10-2018 DB29_00778 ccc73f9b1942407cd2528822e28c702a 201 TIGRFAM TIGR03733 lanti_perm_MutG: lantibiotic protection ABC transporter permease subunit, MutG family 1 198 5.1E-73 T 14-10-2018 IPR022294 Lantibiotic protection ABC transporter permease subunit, MutG family DB29_02834 f9bf16f07a49277c4ec3edce4f41f4b5 307 SUPERFAMILY SSF55347 99 266 2.35E-32 T 14-10-2018 DB29_02834 f9bf16f07a49277c4ec3edce4f41f4b5 307 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 104 168 1.7E-6 T 14-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 DB29_02834 f9bf16f07a49277c4ec3edce4f41f4b5 307 Gene3D G3DSA:3.40.50.720 1 269 2.3E-78 T 14-10-2018 DB29_02834 f9bf16f07a49277c4ec3edce4f41f4b5 307 SUPERFAMILY SSF51735 1 119 6.43E-34 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_02834 f9bf16f07a49277c4ec3edce4f41f4b5 307 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 1 90 9.5E-20 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 DB29_02834 f9bf16f07a49277c4ec3edce4f41f4b5 307 Gene3D G3DSA:3.30.360.10 100 288 2.3E-78 T 14-10-2018 DB29_01933 cae2f0049955b982406596b2ce4731f9 157 Gene3D G3DSA:1.10.10.1240 2 72 3.5E-35 T 14-10-2018 DB29_01933 cae2f0049955b982406596b2ce4731f9 157 Pfam PF05848 Firmicute transcriptional repressor of class III stress genes (CtsR) 3 150 1.9E-57 T 14-10-2018 IPR008463 Transcriptional repressor of class III stress genes GO:0003677|GO:0006355 DB29_01933 cae2f0049955b982406596b2ce4731f9 157 PIRSF PIRSF010607 1 154 5.5E-63 T 14-10-2018 IPR008463 Transcriptional repressor of class III stress genes GO:0003677|GO:0006355 DB29_01933 cae2f0049955b982406596b2ce4731f9 157 Gene3D G3DSA:1.10.1200.150 73 155 4.2E-29 T 14-10-2018 DB29_03008 3e01cae9105226f00e9775d862bc79bb 194 SUPERFAMILY SSF54593 16 147 1.48E-19 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DB29_03008 3e01cae9105226f00e9775d862bc79bb 194 Gene3D G3DSA:3.10.180.10 14 147 9.9E-16 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DB29_03008 3e01cae9105226f00e9775d862bc79bb 194 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 18 137 8.1E-12 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain DB29_01134 460c2dc01810f0c20821703c2f441a9a 155 Gene3D G3DSA:3.40.50.300 3 149 2.3E-37 T 14-10-2018 DB29_01134 460c2dc01810f0c20821703c2f441a9a 155 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 12 131 5.7E-35 T 14-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 DB29_01134 460c2dc01810f0c20821703c2f441a9a 155 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 9 128 1.2E-34 T 14-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 DB29_01134 460c2dc01810f0c20821703c2f441a9a 155 SUPERFAMILY SSF52540 25 118 2.02E-18 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_01585 df1a5ef9aaf6a63d98cd4c0f88c052bf 456 PIRSF PIRSF006603 1 454 5.5E-94 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 DB29_01585 df1a5ef9aaf6a63d98cd4c0f88c052bf 456 Pfam PF01554 MatE 25 186 1.2E-28 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 DB29_01585 df1a5ef9aaf6a63d98cd4c0f88c052bf 456 Pfam PF01554 MatE 247 406 1.7E-23 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 DB29_01585 df1a5ef9aaf6a63d98cd4c0f88c052bf 456 TIGRFAM TIGR00797 matE: MATE efflux family protein 25 416 5.7E-55 T 14-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 DB29_02009 045d1eaae2c3572fd4f9150066b20272 322 SMART SM00471 45 157 7.1E-4 T 14-10-2018 IPR003607 HD/PDEase domain DB29_02009 045d1eaae2c3572fd4f9150066b20272 322 Gene3D G3DSA:1.10.3210.10 1 251 1.9E-29 T 14-10-2018 DB29_02009 045d1eaae2c3572fd4f9150066b20272 322 SUPERFAMILY SSF109604 1 246 6.73E-36 T 14-10-2018 DB29_02009 045d1eaae2c3572fd4f9150066b20272 322 Pfam PF01966 HD domain 49 102 6.4E-10 T 14-10-2018 IPR006674 HD domain DB29_01172 c58229141e5ba743d2c0f04cf0506154 113 Pfam PF01022 Bacterial regulatory protein, arsR family 19 63 5.1E-17 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DB29_01172 c58229141e5ba743d2c0f04cf0506154 113 SMART SM00418 12 91 1.3E-27 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DB29_01172 c58229141e5ba743d2c0f04cf0506154 113 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 61 76 5.0E-19 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DB29_01172 c58229141e5ba743d2c0f04cf0506154 113 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 33 44 5.0E-19 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DB29_01172 c58229141e5ba743d2c0f04cf0506154 113 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 14 29 5.0E-19 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DB29_01172 c58229141e5ba743d2c0f04cf0506154 113 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 46 61 5.0E-19 T 14-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 DB29_01172 c58229141e5ba743d2c0f04cf0506154 113 SUPERFAMILY SSF46785 8 82 6.81E-24 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_01172 c58229141e5ba743d2c0f04cf0506154 113 Gene3D G3DSA:1.10.10.10 3 98 1.1E-26 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_02337 1904ecde1b7790819b2f5393792e84ea 209 SUPERFAMILY SSF53271 4 207 2.62E-72 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like DB29_02337 1904ecde1b7790819b2f5393792e84ea 209 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 3 209 47.688 T 14-10-2018 IPR034332 Uracil phosphoribosyltransferase, bacterial-type KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 DB29_02337 1904ecde1b7790819b2f5393792e84ea 209 Gene3D G3DSA:3.40.50.2020 1 209 2.6E-81 T 14-10-2018 DB29_02337 1904ecde1b7790819b2f5393792e84ea 209 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 3 209 8.9E-92 T 14-10-2018 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 DB29_02337 1904ecde1b7790819b2f5393792e84ea 209 Pfam PF14681 Uracil phosphoribosyltransferase 6 208 1.6E-72 T 14-10-2018 DB29_00877 31c2079b789b1aaf44f17291531913fb 333 SUPERFAMILY SSF50814 150 333 4.87E-79 T 14-10-2018 IPR012674 Calycin DB29_00877 31c2079b789b1aaf44f17291531913fb 333 Gene3D G3DSA:2.40.128.20 150 333 9.2E-80 T 14-10-2018 IPR012674 Calycin DB29_00877 31c2079b789b1aaf44f17291531913fb 333 Pfam PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment 156 333 1.5E-80 T 14-10-2018 IPR015304 ZinT domain GO:0008270 DB29_02370 6b4266a49ad6825fd9b637b6201768d1 179 SUPERFAMILY SSF55729 2 169 3.06E-39 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase DB29_02370 6b4266a49ad6825fd9b637b6201768d1 179 Pfam PF13302 Acetyltransferase (GNAT) domain 8 145 5.0E-21 T 14-10-2018 IPR000182 GNAT domain DB29_02370 6b4266a49ad6825fd9b637b6201768d1 179 Gene3D G3DSA:3.40.630.30 3 177 2.4E-44 T 14-10-2018 DB29_00776 cb3562e2f0bae811d1871b9832cf359d 233 SUPERFAMILY SSF52540 3 213 1.04E-58 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_00776 cb3562e2f0bae811d1871b9832cf359d 233 Gene3D G3DSA:3.40.50.300 2 233 3.5E-59 T 14-10-2018 DB29_00776 cb3562e2f0bae811d1871b9832cf359d 233 Pfam PF00005 ABC transporter 22 158 1.7E-32 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB29_00776 cb3562e2f0bae811d1871b9832cf359d 233 SMART SM00382 30 214 2.1E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_00776 cb3562e2f0bae811d1871b9832cf359d 233 TIGRFAM TIGR03740 galliderm_ABC: lantibiotic protection ABC transporter, ATP-binding subunit 6 228 3.4E-119 T 14-10-2018 IPR022501 Gallidermin ABC transporter, ATP-binding subunit DB29_00909 1f1197db7f6859c9faa876f1ef1e6d3b 364 Pfam PF02608 ABC transporter substrate-binding protein PnrA-like 46 355 3.5E-77 T 14-10-2018 IPR003760 ABC transporter substrate-binding protein PnrA-like GO:0005886 DB29_00909 1f1197db7f6859c9faa876f1ef1e6d3b 364 Gene3D G3DSA:3.40.50.2300 154 350 2.6E-105 T 14-10-2018 DB29_00909 1f1197db7f6859c9faa876f1ef1e6d3b 364 Gene3D G3DSA:3.40.50.2300 46 317 2.6E-105 T 14-10-2018 DB29_00909 1f1197db7f6859c9faa876f1ef1e6d3b 364 SUPERFAMILY SSF53822 122 270 8.63E-6 T 14-10-2018 IPR028082 Periplasmic binding protein-like I DB29_01158 b7750ef63de35ae5d2763dd9191a4b15 122 Gene3D G3DSA:1.10.10.810 1 115 3.4E-54 T 14-10-2018 DB29_01158 b7750ef63de35ae5d2763dd9191a4b15 122 SUPERFAMILY SSF159888 1 122 9.42E-42 T 14-10-2018 DB29_01158 b7750ef63de35ae5d2763dd9191a4b15 122 Pfam PF08818 Domain of unknown function (DU1801) 17 110 1.4E-11 T 14-10-2018 IPR014922 Domain of unknown function DUF1801 DB29_01657 59bee538a9e18acbeedf6258a3d3bc40 280 Gene3D G3DSA:1.10.3720.10 1 268 2.4E-69 T 14-10-2018 IPR035906 MetI-like superfamily DB29_01657 59bee538a9e18acbeedf6258a3d3bc40 280 SUPERFAMILY SSF161098 4 280 7.38E-75 T 14-10-2018 IPR035906 MetI-like superfamily DB29_01657 59bee538a9e18acbeedf6258a3d3bc40 280 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 93 271 3.2E-21 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DB29_01282 4b4e4e42d5dfcf1ebc2937412e063597 316 SUPERFAMILY SSF161098 72 302 1.7E-49 T 14-10-2018 IPR035906 MetI-like superfamily DB29_01282 4b4e4e42d5dfcf1ebc2937412e063597 316 Gene3D G3DSA:1.10.3720.10 68 316 2.8E-60 T 14-10-2018 IPR035906 MetI-like superfamily DB29_01282 4b4e4e42d5dfcf1ebc2937412e063597 316 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 103 311 4.3E-9 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DB29_00126 0db905900ed4192eef2a185b1ac524b9 228 SUPERFAMILY SSF46894 120 223 2.78E-29 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DB29_00126 0db905900ed4192eef2a185b1ac524b9 228 Gene3D G3DSA:3.40.50.2300 1 120 6.4E-34 T 14-10-2018 DB29_00126 0db905900ed4192eef2a185b1ac524b9 228 SUPERFAMILY SSF52172 2 125 2.56E-36 T 14-10-2018 IPR011006 CheY-like superfamily DB29_00126 0db905900ed4192eef2a185b1ac524b9 228 SMART SM00448 1 111 4.5E-37 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DB29_00126 0db905900ed4192eef2a185b1ac524b9 228 Pfam PF00486 Transcriptional regulatory protein, C terminal 147 222 3.9E-27 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DB29_00126 0db905900ed4192eef2a185b1ac524b9 228 Gene3D G3DSA:1.10.10.10 123 226 2.2E-34 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_00126 0db905900ed4192eef2a185b1ac524b9 228 Pfam PF00072 Response regulator receiver domain 3 111 1.1E-26 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DB29_00126 0db905900ed4192eef2a185b1ac524b9 228 SMART SM00862 147 222 1.7E-29 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DB29_01233 bbfee16ae2d4deaa576e857720995d48 273 SMART SM00079 48 270 1.4E-4 T 14-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 DB29_01233 bbfee16ae2d4deaa576e857720995d48 273 SMART SM00062 48 271 7.4E-79 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DB29_01233 bbfee16ae2d4deaa576e857720995d48 273 Gene3D G3DSA:3.40.190.10 50 267 6.9E-84 T 14-10-2018 DB29_01233 bbfee16ae2d4deaa576e857720995d48 273 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 50 270 2.6E-60 T 14-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF DB29_01233 bbfee16ae2d4deaa576e857720995d48 273 SUPERFAMILY SSF53850 1 271 5.11E-70 T 14-10-2018 DB29_01233 bbfee16ae2d4deaa576e857720995d48 273 Gene3D G3DSA:3.40.190.10 136 233 6.9E-84 T 14-10-2018 DB29_01233 bbfee16ae2d4deaa576e857720995d48 273 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 72 85 - T 14-10-2018 IPR018313 Solute-binding protein family 3, conserved site DB29_0P0013 d235e45e1e3e6b994f3698dd86e255d4 120 Pfam PF08863 YolD-like protein 21 118 9.2E-24 T 14-10-2018 IPR014962 YolD-like protein DB29_02621 62d7b2969ec6139402e63abd95babaa2 156 Pfam PF05360 yiaA/B two helix domain 32 84 2.4E-21 T 14-10-2018 IPR008024 YiaAB two helix DB29_02621 62d7b2969ec6139402e63abd95babaa2 156 Pfam PF05360 yiaA/B two helix domain 95 148 1.3E-20 T 14-10-2018 IPR008024 YiaAB two helix DB29_01732 d35c5c664587cc6d403ab1d5551f4379 483 PIRSF PIRSF005690 1 481 8.6E-148 T 14-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 DB29_01732 d35c5c664587cc6d403ab1d5551f4379 483 Pfam PF03323 Bacillus/Clostridium GerA spore germination protein 12 465 2.5E-103 T 14-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 DB29_04346 54e5c366334f69ad89256e5eff1373e6 362 Pfam PF03845 Spore germination protein 6 324 9.4E-59 T 14-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 DB29_04346 54e5c366334f69ad89256e5eff1373e6 362 TIGRFAM TIGR00912 2A0309: spore germination protein (amino acid permease) 6 359 3.4E-61 T 14-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 DB29_00097 fd52b9010eab75aad8b046f37b72287b 285 Hamap MF_00995 Chorismate dehydratase [mqnA]. 4 264 26.96 T 14-10-2018 IPR030868 Chorismate dehydratase GO:0009234|GO:0016829 KEGG: 00130+4.2.1.151|MetaCyc: PWY-7371|MetaCyc: PWY-7374 DB29_00097 fd52b9010eab75aad8b046f37b72287b 285 Pfam PF02621 Menaquinone biosynthesis 3 260 3.7E-67 T 14-10-2018 IPR003773 Menaquinone biosynthesis enzyme DB29_00097 fd52b9010eab75aad8b046f37b72287b 285 SUPERFAMILY SSF53850 3 265 2.99E-68 T 14-10-2018 DB29_00097 fd52b9010eab75aad8b046f37b72287b 285 Gene3D G3DSA:3.40.190.10 78 175 2.6E-72 T 14-10-2018 DB29_00097 fd52b9010eab75aad8b046f37b72287b 285 Gene3D G3DSA:3.40.190.10 5 252 2.6E-72 T 14-10-2018 DB29_03701 1ffe3c0b90baf61d2c669c03add0cde1 360 Pfam PF00117 Glutamine amidotransferase class-I 172 347 1.1E-40 T 14-10-2018 IPR017926 Glutamine amidotransferase DB29_03701 1ffe3c0b90baf61d2c669c03add0cde1 360 Gene3D G3DSA:3.40.50.880 143 350 5.5E-58 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like DB29_03701 1ffe3c0b90baf61d2c669c03add0cde1 360 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 281 292 3.9E-32 T 14-10-2018 DB29_03701 1ffe3c0b90baf61d2c669c03add0cde1 360 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 239 255 3.9E-32 T 14-10-2018 DB29_03701 1ffe3c0b90baf61d2c669c03add0cde1 360 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 209 223 3.9E-32 T 14-10-2018 DB29_03701 1ffe3c0b90baf61d2c669c03add0cde1 360 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 170 184 3.9E-32 T 14-10-2018 DB29_03701 1ffe3c0b90baf61d2c669c03add0cde1 360 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 256 273 3.9E-32 T 14-10-2018 DB29_03701 1ffe3c0b90baf61d2c669c03add0cde1 360 PRINTS PR00097 Anthranilate synthase component II signature 212 221 3.4E-7 T 14-10-2018 DB29_03701 1ffe3c0b90baf61d2c669c03add0cde1 360 PRINTS PR00097 Anthranilate synthase component II signature 239 250 3.4E-7 T 14-10-2018 DB29_03701 1ffe3c0b90baf61d2c669c03add0cde1 360 PRINTS PR00097 Anthranilate synthase component II signature 325 338 3.4E-7 T 14-10-2018 DB29_03701 1ffe3c0b90baf61d2c669c03add0cde1 360 SUPERFAMILY SSF52021 1 139 3.4E-51 T 14-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DB29_03701 1ffe3c0b90baf61d2c669c03add0cde1 360 SMART SM01097 1 131 2.4E-74 T 14-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DB29_03701 1ffe3c0b90baf61d2c669c03add0cde1 360 Gene3D G3DSA:3.50.30.20 1 142 4.5E-55 T 14-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DB29_03701 1ffe3c0b90baf61d2c669c03add0cde1 360 SUPERFAMILY SSF52317 155 349 3.79E-53 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like DB29_03701 1ffe3c0b90baf61d2c669c03add0cde1 360 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 5 348 2.4E-134 T 14-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DB29_03701 1ffe3c0b90baf61d2c669c03add0cde1 360 PRINTS PR00096 Glutamine amidotransferase superfamily signature 212 221 7.8E-12 T 14-10-2018 DB29_03701 1ffe3c0b90baf61d2c669c03add0cde1 360 PRINTS PR00096 Glutamine amidotransferase superfamily signature 325 338 7.8E-12 T 14-10-2018 DB29_03701 1ffe3c0b90baf61d2c669c03add0cde1 360 PRINTS PR00096 Glutamine amidotransferase superfamily signature 239 250 7.8E-12 T 14-10-2018 DB29_03701 1ffe3c0b90baf61d2c669c03add0cde1 360 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 4 130 2.9E-48 T 14-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DB29_03701 1ffe3c0b90baf61d2c669c03add0cde1 360 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 1 354 42.734 T 14-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 DB29_00622 5ea6c46e1f5555c12fbd9872d56928fa 370 TIGRFAM TIGR01437 selA_rel: uncharacterized pyridoxal phosphate-dependent enzyme 3 364 1.4E-165 T 14-10-2018 IPR006337 Pyridoxal phosphate-dependent enzyme, SelA-like KEGG: 00030+4.3.1.29|MetaCyc: PWY-7310 DB29_00622 5ea6c46e1f5555c12fbd9872d56928fa 370 Pfam PF03841 L-seryl-tRNA selenium transferase 12 292 2.8E-20 T 14-10-2018 IPR018319 L-seryl-tRNA selenium transferase-like KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 DB29_00622 5ea6c46e1f5555c12fbd9872d56928fa 370 SUPERFAMILY SSF53383 8 365 9.94E-42 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DB29_00622 5ea6c46e1f5555c12fbd9872d56928fa 370 Gene3D G3DSA:3.40.640.10 22 277 5.8E-61 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DB29_01539 5881c3ad1b81205cd0988ccd76d37fcb 226 SUPERFAMILY SSF53474 40 202 2.16E-6 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DB29_01539 5881c3ad1b81205cd0988ccd76d37fcb 226 Gene3D G3DSA:3.40.50.1820 8 211 1.6E-6 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DB29_04111 a1ed22c479eedca6f12f6f222e9145a5 177 Pfam PF14091 Domain of unknown function (DUF4269) 20 168 8.9E-57 T 14-10-2018 IPR025365 Protein of unknown function DUF4269 DB29_02984 c9bda03b6f0cbdd104cced57ce5673fa 131 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 7 125 1.0E-10 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain DB29_02984 c9bda03b6f0cbdd104cced57ce5673fa 131 SUPERFAMILY SSF54593 7 128 9.8E-22 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DB29_02984 c9bda03b6f0cbdd104cced57ce5673fa 131 Gene3D G3DSA:3.10.180.10 3 131 7.4E-25 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DB29_04199 196a3e683ec50bb7943726ef0fc81636 47 Pfam PF01381 Helix-turn-helix 1 33 1.9E-5 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DB29_04199 196a3e683ec50bb7943726ef0fc81636 47 SUPERFAMILY SSF47413 3 39 1.48E-6 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DB29_04199 196a3e683ec50bb7943726ef0fc81636 47 Gene3D G3DSA:1.10.260.40 2 39 4.4E-6 T 14-10-2018 DB29_03796 b3ff5732e9125119b21d81cfae4c4cab 184 Gene3D G3DSA:3.30.300.270 68 182 1.3E-25 T 14-10-2018 IPR038503 Stage III sporulation protein AH-like superfamily DB29_03796 b3ff5732e9125119b21d81cfae4c4cab 184 Pfam PF12685 SpoIIIAH-like protein 6 174 5.8E-23 T 14-10-2018 IPR024232 Stage III sporulation protein AH-like DB29_03720 7479c570e83df243b0ad2c7776bba55a 271 Pfam PF10026 Predicted Zn-dependent protease (DUF2268) 73 265 1.0E-61 T 14-10-2018 IPR018728 Domain of unknown function DUF2268 DB29_01870 451c511ca0fa83e39f6d3df5a1dd717b 145 ProSitePatterns PS00783 Ribosomal protein L13 signature. 106 128 - T 14-10-2018 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 DB29_01870 451c511ca0fa83e39f6d3df5a1dd717b 145 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 16 144 28.764 T 14-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 DB29_01870 451c511ca0fa83e39f6d3df5a1dd717b 145 PIRSF PIRSF002181 1 143 2.4E-52 T 14-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 DB29_01870 451c511ca0fa83e39f6d3df5a1dd717b 145 SUPERFAMILY SSF52161 5 143 5.49E-61 T 14-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 DB29_01870 451c511ca0fa83e39f6d3df5a1dd717b 145 Pfam PF00572 Ribosomal protein L13 15 139 9.9E-60 T 14-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 DB29_01870 451c511ca0fa83e39f6d3df5a1dd717b 145 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 5 142 1.4E-64 T 14-10-2018 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB29_01870 451c511ca0fa83e39f6d3df5a1dd717b 145 Gene3D G3DSA:3.90.1180.10 2 143 3.4E-63 T 14-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 DB29_02276 b6b9b17bc60113a879771ea1b8529ed7 131 Pfam PF00392 Bacterial regulatory proteins, gntR family 18 80 1.2E-16 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DB29_02276 b6b9b17bc60113a879771ea1b8529ed7 131 Gene3D G3DSA:1.10.10.10 13 130 6.5E-28 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_02276 b6b9b17bc60113a879771ea1b8529ed7 131 SUPERFAMILY SSF46785 10 84 1.24E-21 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_02276 b6b9b17bc60113a879771ea1b8529ed7 131 SMART SM00345 21 80 1.7E-15 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DB29_02127 f18ca3d3e685a8b26c143af919ae300f 142 Pfam PF08818 Domain of unknown function (DU1801) 25 129 5.5E-14 T 14-10-2018 IPR014922 Domain of unknown function DUF1801 DB29_02127 f18ca3d3e685a8b26c143af919ae300f 142 SUPERFAMILY SSF159888 12 131 2.22E-7 T 14-10-2018 DB29_00256 eefe49c48a40c5eba647caa6cf7d64e0 74 SMART SM00530 5 60 2.3E-14 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DB29_00256 eefe49c48a40c5eba647caa6cf7d64e0 74 Pfam PF01381 Helix-turn-helix 6 60 3.1E-16 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DB29_00256 eefe49c48a40c5eba647caa6cf7d64e0 74 SUPERFAMILY SSF47413 6 63 4.29E-16 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DB29_00256 eefe49c48a40c5eba647caa6cf7d64e0 74 Gene3D G3DSA:1.10.260.40 4 74 1.8E-17 T 14-10-2018 DB29_03802 07053a8c4b9cb708b5e25f588b174088 458 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 8 445 30.07 T 14-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 DB29_03802 07053a8c4b9cb708b5e25f588b174088 458 Pfam PF02601 Exonuclease VII, large subunit 129 442 3.9E-100 T 14-10-2018 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 DB29_03802 07053a8c4b9cb708b5e25f588b174088 458 Pfam PF13742 OB-fold nucleic acid binding domain 11 106 3.8E-31 T 14-10-2018 IPR025824 OB-fold nucleic acid binding domain GO:0003676 DB29_03802 07053a8c4b9cb708b5e25f588b174088 458 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 12 350 8.5E-138 T 14-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 DB29_02063 681c03887849964fdb4348575dfce175 211 Pfam PF13083 KH domain 66 127 2.7E-10 T 14-10-2018 DB29_02063 681c03887849964fdb4348575dfce175 211 SMART SM01245 4 56 4.1E-23 T 14-10-2018 IPR032782 Jag, N-terminal DB29_02063 681c03887849964fdb4348575dfce175 211 Gene3D G3DSA:3.30.1370.50 144 211 9.2E-26 T 14-10-2018 IPR036867 R3H domain superfamily GO:0003676 DB29_02063 681c03887849964fdb4348575dfce175 211 Pfam PF14804 Jag N-terminus 5 55 2.1E-22 T 14-10-2018 IPR032782 Jag, N-terminal DB29_02063 681c03887849964fdb4348575dfce175 211 Pfam PF01424 R3H domain 147 206 3.3E-15 T 14-10-2018 IPR001374 R3H domain GO:0003676 DB29_02063 681c03887849964fdb4348575dfce175 211 Gene3D G3DSA:3.30.300.20 58 143 3.6E-21 T 14-10-2018 IPR015946 K homology domain-like, alpha/beta DB29_02063 681c03887849964fdb4348575dfce175 211 Gene3D G3DSA:3.30.30.80 3 55 1.4E-19 T 14-10-2018 IPR038247 Jag, N-terminal domain superfamily DB29_02063 681c03887849964fdb4348575dfce175 211 SUPERFAMILY SSF82708 158 207 3.53E-10 T 14-10-2018 IPR036867 R3H domain superfamily GO:0003676 DB29_02063 681c03887849964fdb4348575dfce175 211 SMART SM00393 129 208 3.5E-20 T 14-10-2018 IPR001374 R3H domain GO:0003676 DB29_00136 1b375ced4e4d030bc7c2297a43313182 108 Gene3D G3DSA:1.10.260.40 6 97 5.3E-26 T 14-10-2018 DB29_00136 1b375ced4e4d030bc7c2297a43313182 108 Pfam PF01381 Helix-turn-helix 10 64 1.8E-17 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DB29_00136 1b375ced4e4d030bc7c2297a43313182 108 SUPERFAMILY SSF47413 3 72 6.97E-21 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DB29_00136 1b375ced4e4d030bc7c2297a43313182 108 SMART SM00530 9 64 3.6E-19 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DB29_01332 dc53ffe6129cf5231fb37f5c3fd1de81 1474 SMART SM00382 991 1162 5.3 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_01332 dc53ffe6129cf5231fb37f5c3fd1de81 1474 SMART SM00382 664 843 1.9 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_01332 dc53ffe6129cf5231fb37f5c3fd1de81 1474 SMART SM00382 1272 1437 1.1 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_01332 dc53ffe6129cf5231fb37f5c3fd1de81 1474 Gene3D G3DSA:2.60.200.20 83 172 2.7E-7 T 14-10-2018 DB29_01332 dc53ffe6129cf5231fb37f5c3fd1de81 1474 SUPERFAMILY SSF52540 620 890 1.15E-29 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_01332 dc53ffe6129cf5231fb37f5c3fd1de81 1474 SUPERFAMILY SSF52540 1259 1411 2.16E-6 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_01332 dc53ffe6129cf5231fb37f5c3fd1de81 1474 Gene3D G3DSA:3.40.50.300 954 1236 7.3E-65 T 14-10-2018 DB29_01332 dc53ffe6129cf5231fb37f5c3fd1de81 1474 SUPERFAMILY SSF52540 948 1176 1.13E-13 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_01332 dc53ffe6129cf5231fb37f5c3fd1de81 1474 Pfam PF12538 DNA transporter 4 116 2.1E-32 T 14-10-2018 IPR022206 Firmicutes EssC, N-terminal DB29_01332 dc53ffe6129cf5231fb37f5c3fd1de81 1474 Gene3D G3DSA:3.40.50.300 612 939 1.4E-79 T 14-10-2018 DB29_01332 dc53ffe6129cf5231fb37f5c3fd1de81 1474 Pfam PF01580 FtsK/SpoIIIE family 633 850 3.7E-33 T 14-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 DB29_01332 dc53ffe6129cf5231fb37f5c3fd1de81 1474 Pfam PF01580 FtsK/SpoIIIE family 962 1167 4.1E-23 T 14-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 DB29_01332 dc53ffe6129cf5231fb37f5c3fd1de81 1474 Gene3D G3DSA:3.40.50.300 1246 1470 3.2E-18 T 14-10-2018 DB29_01332 dc53ffe6129cf5231fb37f5c3fd1de81 1474 SUPERFAMILY SSF49879 87 167 2.14E-7 T 14-10-2018 IPR008984 SMAD/FHA domain superfamily GO:0005515 DB29_01332 dc53ffe6129cf5231fb37f5c3fd1de81 1474 TIGRFAM TIGR03928 T7_EssCb_Firm: type VII secretion protein EssC 199 1472 0.0 T 14-10-2018 IPR023839 Firmicutes EssC, C-terminal DB29_04120 2fc2c9786283f484539364d43ec85304 142 Pfam PF10747 Sporulation inhibitor of replication protein SirA 2 136 2.8E-35 T 14-10-2018 IPR019683 Sporulation inhibitor of replication protein SirA DB29_04120 2fc2c9786283f484539364d43ec85304 142 Gene3D G3DSA:3.30.310.250 1 141 5.3E-39 T 14-10-2018 IPR038449 SirA superfamily DB29_00099 6c23c325e07f0287ab52f03b9018be69 235 TIGRFAM TIGR02752 MenG_heptapren: demethylmenaquinone methyltransferase 3 233 2.3E-138 T 14-10-2018 IPR014122 Demethylmenaquinone methyltransferase GO:0008168|GO:0009234 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 DB29_00099 6c23c325e07f0287ab52f03b9018be69 235 Pfam PF01209 ubiE/COQ5 methyltransferase family 3 233 7.8E-98 T 14-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 DB29_00099 6c23c325e07f0287ab52f03b9018be69 235 Gene3D G3DSA:3.40.50.150 15 234 3.0E-69 T 14-10-2018 DB29_00099 6c23c325e07f0287ab52f03b9018be69 235 SUPERFAMILY SSF53335 3 225 8.06E-48 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DB29_00099 6c23c325e07f0287ab52f03b9018be69 235 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 9 233 7.9E-81 T 14-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 DB29_00099 6c23c325e07f0287ab52f03b9018be69 235 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 20 35 - T 14-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 DB29_00099 6c23c325e07f0287ab52f03b9018be69 235 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 1 233 35.851 T 14-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 DB29_04230 c819ed54395ce147beee88334bc0eb8e 103 Gene3D G3DSA:1.10.246.150 5 99 3.1E-33 T 14-10-2018 DB29_04230 c819ed54395ce147beee88334bc0eb8e 103 Pfam PF05135 Phage gp6-like head-tail connector protein 5 96 1.2E-5 T 14-10-2018 IPR021146 Phage gp6-like head-tail connector protein DB29_02646 c7a8fc73176e0d6275cf0544dd12ea73 244 SUPERFAMILY SSF160631 16 134 5.89E-6 T 14-10-2018 DB29_02646 c7a8fc73176e0d6275cf0544dd12ea73 244 SMART SM00860 21 215 0.0054 T 14-10-2018 IPR018958 Knr4/Smi1-like domain DB29_00744 b3ec445000baecd0ea0bd9bd50775fee 549 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 90 466 7.1E-106 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain DB29_00744 b3ec445000baecd0ea0bd9bd50775fee 549 Gene3D G3DSA:3.90.76.10 63 223 3.0E-164 T 14-10-2018 DB29_00744 b3ec445000baecd0ea0bd9bd50775fee 549 PIRSF PIRSF002741 1 547 2.6E-134 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 DB29_00744 b3ec445000baecd0ea0bd9bd50775fee 549 Gene3D G3DSA:3.10.105.10 306 523 3.0E-164 T 14-10-2018 DB29_00744 b3ec445000baecd0ea0bd9bd50775fee 549 SUPERFAMILY SSF53850 42 538 9.59E-151 T 14-10-2018 DB29_00744 b3ec445000baecd0ea0bd9bd50775fee 549 Gene3D G3DSA:3.40.190.10 224 536 3.0E-164 T 14-10-2018 DB29_01196 906ec17ef33f31e48d1625374c858a46 340 SUPERFAMILY SSF89392 29 204 9.81E-14 T 14-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX DB29_01196 906ec17ef33f31e48d1625374c858a46 340 Gene3D G3DSA:2.50.20.10 24 215 1.9E-13 T 14-10-2018 DB29_03475 96a5c3b04af0ab160bf01b142dc3ed81 148 TIGRFAM TIGR03646 YtoQ_fam: YtoQ family protein 3 146 4.1E-70 T 14-10-2018 IPR019884 YtoQ family protein DB29_03475 96a5c3b04af0ab160bf01b142dc3ed81 148 Pfam PF11071 Nucleoside 2-deoxyribosyltransferase YtoQ 6 145 4.9E-63 T 14-10-2018 IPR019884 YtoQ family protein DB29_03475 96a5c3b04af0ab160bf01b142dc3ed81 148 Gene3D G3DSA:3.40.50.450 30 147 2.9E-6 T 14-10-2018 DB29_01616 3ae281b670ddbd74008614ab0694cd89 456 Gene3D G3DSA:3.90.1150.10 320 456 6.1E-54 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DB29_01616 3ae281b670ddbd74008614ab0694cd89 456 TIGRFAM TIGR01326 OAH_OAS_sulfhy: O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase 36 452 2.3E-213 T 14-10-2018 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase GO:0006520|GO:0016765 DB29_01616 3ae281b670ddbd74008614ab0694cd89 456 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 229 243 - T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 DB29_01616 3ae281b670ddbd74008614ab0694cd89 456 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 37 452 5.3E-150 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 DB29_01616 3ae281b670ddbd74008614ab0694cd89 456 PIRSF PIRSF001434 22 455 2.7E-137 T 14-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 DB29_01616 3ae281b670ddbd74008614ab0694cd89 456 Gene3D G3DSA:3.40.640.10 35 316 4.8E-105 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DB29_01616 3ae281b670ddbd74008614ab0694cd89 456 SUPERFAMILY SSF53383 35 451 2.53E-135 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DB29_01572 8d569e51dc41ca973e1830041de9fc2c 478 Pfam PF00171 Aldehyde dehydrogenase family 11 474 5.8E-164 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 DB29_01572 8d569e51dc41ca973e1830041de9fc2c 478 Gene3D G3DSA:3.40.605.10 7 472 5.4E-162 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 DB29_01572 8d569e51dc41ca973e1830041de9fc2c 478 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 275 286 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 DB29_01572 8d569e51dc41ca973e1830041de9fc2c 478 Gene3D G3DSA:3.40.309.10 252 443 5.4E-162 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 DB29_01572 8d569e51dc41ca973e1830041de9fc2c 478 SUPERFAMILY SSF53720 3 476 1.7E-155 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 DB29_01572 8d569e51dc41ca973e1830041de9fc2c 478 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 247 254 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 DB29_03829 d02eb0841ddc11aecbfbf1377ea9e8ab 422 Gene3D G3DSA:3.40.630.10 59 393 1.7E-59 T 14-10-2018 DB29_03829 d02eb0841ddc11aecbfbf1377ea9e8ab 422 Pfam PF01546 Peptidase family M20/M25/M40 110 394 2.2E-23 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 DB29_03829 d02eb0841ddc11aecbfbf1377ea9e8ab 422 Pfam PF07687 Peptidase dimerisation domain 213 299 1.5E-12 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain DB29_03829 d02eb0841ddc11aecbfbf1377ea9e8ab 422 Gene3D G3DSA:3.30.70.360 212 329 1.7E-59 T 14-10-2018 DB29_03829 d02eb0841ddc11aecbfbf1377ea9e8ab 422 SUPERFAMILY SSF53187 49 413 6.0E-43 T 14-10-2018 DB29_00228 daa9979629576d6c460cb20c5ce2aee1 317 Gene3D G3DSA:3.40.50.1820 4 317 1.4E-84 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DB29_00228 daa9979629576d6c460cb20c5ce2aee1 317 SUPERFAMILY SSF53474 8 315 3.54E-42 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DB29_00228 daa9979629576d6c460cb20c5ce2aee1 317 Pfam PF05448 Acetyl xylan esterase (AXE1) 1 315 6.6E-123 T 14-10-2018 IPR008391 Acetyl xylan esterase DB29_03947 665a81507d1d2eb41a9bd5932c4d3063 863 Pfam PF09586 Bacterial membrane protein YfhO 13 844 2.7E-191 T 14-10-2018 IPR018580 Uncharacterised protein family YfhO DB29_01243 5f414e431e07fa6e55ed772c689d740e 380 SUPERFAMILY SSF54897 33 110 1.19E-8 T 14-10-2018 DB29_01243 5f414e431e07fa6e55ed772c689d740e 380 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 324 334 - T 14-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site DB29_01243 5f414e431e07fa6e55ed772c689d740e 380 SUPERFAMILY SSF52743 112 378 5.37E-96 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 DB29_01243 5f414e431e07fa6e55ed772c689d740e 380 Gene3D G3DSA:3.30.70.80 26 113 4.4E-16 T 14-10-2018 IPR037045 Peptidase S8 propeptide/proteinase inhibitor I9 superfamily Reactome: R-HSA-381426|Reactome: R-HSA-8866427|Reactome: R-HSA-8957275|Reactome: R-HSA-8964038 DB29_01243 5f414e431e07fa6e55ed772c689d740e 380 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 173 183 - T 14-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site DB29_01243 5f414e431e07fa6e55ed772c689d740e 380 Pfam PF05922 Peptidase inhibitor I9 34 111 1.6E-4 T 14-10-2018 IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 Reactome: R-HSA-381426|Reactome: R-HSA-8866427|Reactome: R-HSA-8957275|Reactome: R-HSA-8964038 DB29_01243 5f414e431e07fa6e55ed772c689d740e 380 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 139 149 - T 14-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site DB29_01243 5f414e431e07fa6e55ed772c689d740e 380 Pfam PF00082 Subtilase family 134 368 3.1E-55 T 14-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 DB29_01243 5f414e431e07fa6e55ed772c689d740e 380 Gene3D G3DSA:3.40.50.200 114 379 1.8E-104 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 DB29_01243 5f414e431e07fa6e55ed772c689d740e 380 PRINTS PR00723 Subtilisin serine protease family (S8) signature 134 153 2.0E-20 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related DB29_01243 5f414e431e07fa6e55ed772c689d740e 380 PRINTS PR00723 Subtilisin serine protease family (S8) signature 323 339 2.0E-20 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related DB29_01243 5f414e431e07fa6e55ed772c689d740e 380 PRINTS PR00723 Subtilisin serine protease family (S8) signature 169 182 2.0E-20 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related DB29_01567 d3142e937fa4afa3bd1705be5be3e92d 128 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 27 98 7.3E-5 T 14-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain DB29_01567 d3142e937fa4afa3bd1705be5be3e92d 128 SUPERFAMILY SSF53927 4 127 1.23E-23 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 DB29_01567 d3142e937fa4afa3bd1705be5be3e92d 128 Gene3D G3DSA:3.40.140.10 2 128 2.4E-28 T 14-10-2018 DB29_02522 c7effb8a552404626d25b7f3faf71619 339 SUPERFAMILY SSF51735 2 333 3.13E-102 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_02522 c7effb8a552404626d25b7f3faf71619 339 Gene3D G3DSA:3.40.50.720 3 305 1.5E-132 T 14-10-2018 DB29_02522 c7effb8a552404626d25b7f3faf71619 339 Gene3D G3DSA:3.90.25.10 192 313 1.5E-132 T 14-10-2018 DB29_02522 c7effb8a552404626d25b7f3faf71619 339 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 306 1.5E-99 T 14-10-2018 IPR016040 NAD(P)-binding domain DB29_02522 c7effb8a552404626d25b7f3faf71619 339 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 3 320 5.5E-153 T 14-10-2018 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|KEGG: 00525+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 DB29_01459 26f763ebc434d48f2099f85e59da2fbe 417 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 115 154 - T 14-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 DB29_01459 26f763ebc434d48f2099f85e59da2fbe 417 SUPERFAMILY SSF53187 5 415 3.14E-62 T 14-10-2018 DB29_01459 26f763ebc434d48f2099f85e59da2fbe 417 SUPERFAMILY SSF55031 189 316 1.47E-20 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain DB29_01459 26f763ebc434d48f2099f85e59da2fbe 417 Gene3D G3DSA:3.40.630.10 28 414 1.0E-92 T 14-10-2018 DB29_01459 26f763ebc434d48f2099f85e59da2fbe 417 TIGRFAM TIGR01910 DapE-ArgE: peptidase, ArgE/DapE family 20 406 3.5E-83 T 14-10-2018 IPR010182 N-formyl-4-amino-5-aminomethyl-2-methylpyrimidine deformylase/Succinyl-diaminopimelate desuccinylase DB29_01459 26f763ebc434d48f2099f85e59da2fbe 417 Gene3D G3DSA:3.30.70.360 189 332 1.0E-92 T 14-10-2018 DB29_01459 26f763ebc434d48f2099f85e59da2fbe 417 Pfam PF01546 Peptidase family M20/M25/M40 83 411 1.5E-32 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 DB29_01459 26f763ebc434d48f2099f85e59da2fbe 417 Pfam PF07687 Peptidase dimerisation domain 186 319 3.8E-22 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain DB29_03961 10db19a2b1f9bd9e821e95894d19adc9 215 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 4 213 3.5E-86 T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 DB29_03961 10db19a2b1f9bd9e821e95894d19adc9 215 PIRSF PIRSF001461 1 215 5.1E-88 T 14-10-2018 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 DB29_03961 10db19a2b1f9bd9e821e95894d19adc9 215 Gene3D G3DSA:3.20.20.70 1 215 1.2E-85 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DB29_03961 10db19a2b1f9bd9e821e95894d19adc9 215 Pfam PF00834 Ribulose-phosphate 3 epimerase family 4 200 1.8E-79 T 14-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 DB29_03961 10db19a2b1f9bd9e821e95894d19adc9 215 SUPERFAMILY SSF51366 1 213 2.29E-70 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 DB29_01191 a62d64ab0f7ca1b8288d9c8e25060243 125 Pfam PF01740 STAS domain 19 101 8.0E-11 T 14-10-2018 IPR002645 STAS domain DB29_01191 a62d64ab0f7ca1b8288d9c8e25060243 125 Gene3D G3DSA:3.30.750.24 7 124 5.0E-32 T 14-10-2018 IPR036513 STAS domain superfamily DB29_01191 a62d64ab0f7ca1b8288d9c8e25060243 125 SUPERFAMILY SSF52091 8 120 3.34E-20 T 14-10-2018 IPR036513 STAS domain superfamily DB29_01911 83e87b6c89510931068a5df4fb4c339c 204 SUPERFAMILY SSF53335 8 198 2.26E-33 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DB29_01911 83e87b6c89510931068a5df4fb4c339c 204 Pfam PF05175 Methyltransferase small domain 29 199 1.5E-41 T 14-10-2018 IPR007848 Methyltransferase small domain GO:0008168 DB29_01911 83e87b6c89510931068a5df4fb4c339c 204 Gene3D G3DSA:3.40.50.150 6 204 3.4E-42 T 14-10-2018 DB29_02331 38e7876b52a0061af015fc02fde001dd 180 Pfam PF02659 Putative manganese efflux pump 31 177 2.4E-40 T 14-10-2018 IPR003810 Putative manganese efflux pump DB29_02331 38e7876b52a0061af015fc02fde001dd 180 Hamap MF_01521 Probable manganese efflux pump MntP [mntP]. 2 180 22.321 T 14-10-2018 IPR022929 Putative manganese efflux pump MntP DB29_04232 6192bd13dafeef03468269110d1f57a9 136 TIGRFAM TIGR01725 phge_HK97_gp10: phage protein, HK97 gp10 family 20 121 5.2E-8 T 14-10-2018 IPR010064 Bacteriophage HK97-gp10, putative tail-component DB29_04232 6192bd13dafeef03468269110d1f57a9 136 Pfam PF04883 Bacteriophage HK97-gp10, putative tail-component 9 81 4.0E-8 T 14-10-2018 IPR010064 Bacteriophage HK97-gp10, putative tail-component DB29_02469 38b4469360c1fff8180ea81d197f387b 554 Pfam PF13556 PucR C-terminal helix-turn-helix domain 478 536 3.5E-24 T 14-10-2018 IPR025736 PucR C-terminal helix-turn-helix domain DB29_02469 38b4469360c1fff8180ea81d197f387b 554 Gene3D G3DSA:1.10.10.2840 413 541 1.4E-21 T 14-10-2018 DB29_02469 38b4469360c1fff8180ea81d197f387b 554 Pfam PF07905 Purine catabolism regulatory protein-like family 5 124 5.3E-33 T 14-10-2018 IPR012914 Purine catabolism PurC-like domain DB29_01279 c6da145a3f551722ee459a162c73c9f0 192 Pfam PF08281 Sigma-70, region 4 126 176 7.4E-10 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DB29_01279 c6da145a3f551722ee459a162c73c9f0 192 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 42 180 2.0E-14 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 DB29_01279 c6da145a3f551722ee459a162c73c9f0 192 SUPERFAMILY SSF88659 103 184 2.99E-13 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like DB29_01279 c6da145a3f551722ee459a162c73c9f0 192 Gene3D G3DSA:1.10.10.10 105 184 2.1E-12 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_00767 227e70a3a439f716d7f840080a9ca332 352 Pfam PF10776 Protein of unknown function (DUF2600) 21 347 3.0E-132 T 14-10-2018 IPR019712 Protein of unknown function DUF2600 DB29_02352 a19acdead26d1da3dd421dc0ffc3607e 252 SUPERFAMILY SSF143842 36 250 2.62E-45 T 14-10-2018 IPR036209 YwmB-like superfamily DB29_02352 a19acdead26d1da3dd421dc0ffc3607e 252 Pfam PF08680 TATA-box binding 53 252 2.0E-44 T 14-10-2018 IPR014794 TATA-box binding DB29_02352 a19acdead26d1da3dd421dc0ffc3607e 252 Gene3D G3DSA:3.30.360.40 177 252 2.1E-25 T 14-10-2018 DB29_02459 05c06018eeb5e071d406eb39033a9c04 287 SUPERFAMILY SSF161098 76 261 1.44E-25 T 14-10-2018 IPR035906 MetI-like superfamily DB29_02459 05c06018eeb5e071d406eb39033a9c04 287 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 101 273 1.9E-24 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DB29_02459 05c06018eeb5e071d406eb39033a9c04 287 Gene3D G3DSA:1.10.3720.10 72 275 2.8E-21 T 14-10-2018 IPR035906 MetI-like superfamily DB29_01272 ebd4fa1fb223d9e576bec7d103c1b2d3 455 Pfam PF00571 CBS domain 139 198 3.4E-10 T 14-10-2018 IPR000644 CBS domain DB29_01272 ebd4fa1fb223d9e576bec7d103c1b2d3 455 Pfam PF00571 CBS domain 203 258 1.5E-10 T 14-10-2018 IPR000644 CBS domain DB29_01272 ebd4fa1fb223d9e576bec7d103c1b2d3 455 Gene3D G3DSA:1.10.357.20 276 453 9.2E-58 T 14-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain DB29_01272 ebd4fa1fb223d9e576bec7d103c1b2d3 455 Pfam PF03448 MgtE intracellular N domain 36 136 8.0E-23 T 14-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain DB29_01272 ebd4fa1fb223d9e576bec7d103c1b2d3 455 Gene3D G3DSA:1.25.60.10 3 134 1.3E-33 T 14-10-2018 IPR038076 MgtE, N-terminal domain superfamily DB29_01272 ebd4fa1fb223d9e576bec7d103c1b2d3 455 Pfam PF01769 Divalent cation transporter 323 445 4.8E-27 T 14-10-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 DB29_01272 ebd4fa1fb223d9e576bec7d103c1b2d3 455 SUPERFAMILY SSF161093 282 451 2.88E-49 T 14-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 DB29_01272 ebd4fa1fb223d9e576bec7d103c1b2d3 455 SUPERFAMILY SSF54631 138 271 1.64E-35 T 14-10-2018 DB29_01272 ebd4fa1fb223d9e576bec7d103c1b2d3 455 TIGRFAM TIGR00400 mgtE: magnesium transporter 17 453 4.8E-136 T 14-10-2018 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 DB29_01272 ebd4fa1fb223d9e576bec7d103c1b2d3 455 SMART SM00924 36 139 2.7E-29 T 14-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain DB29_01272 ebd4fa1fb223d9e576bec7d103c1b2d3 455 SMART SM00116 146 199 1.1E-4 T 14-10-2018 IPR000644 CBS domain DB29_01272 ebd4fa1fb223d9e576bec7d103c1b2d3 455 SMART SM00116 210 258 1.1E-8 T 14-10-2018 IPR000644 CBS domain DB29_01272 ebd4fa1fb223d9e576bec7d103c1b2d3 455 SUPERFAMILY SSF158791 11 135 3.01E-28 T 14-10-2018 DB29_01272 ebd4fa1fb223d9e576bec7d103c1b2d3 455 Gene3D G3DSA:3.10.580.10 136 263 3.2E-47 T 14-10-2018 DB29_04228 00c24d9194b87f5343a982e017652ee4 348 Pfam PF03864 Phage major capsid protein E 10 346 1.1E-53 T 14-10-2018 IPR005564 Major capsid protein GpE DB29_04228 00c24d9194b87f5343a982e017652ee4 348 Gene3D G3DSA:3.90.1690.10 85 310 2.4E-13 T 14-10-2018 DB29_03842 eedd9e3a5afd0264ce4576ca360ff43e 181 PIRSF PIRSF000239 1 181 2.6E-58 T 14-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 DB29_03842 eedd9e3a5afd0264ce4576ca360ff43e 181 SUPERFAMILY SSF52833 6 180 1.52E-57 T 14-10-2018 IPR036249 Thioredoxin-like superfamily DB29_03842 eedd9e3a5afd0264ce4576ca360ff43e 181 Gene3D G3DSA:3.40.30.10 2 181 3.9E-72 T 14-10-2018 DB29_03842 eedd9e3a5afd0264ce4576ca360ff43e 181 Pfam PF00578 AhpC/TSA family 7 142 5.6E-38 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 DB29_00289 d5c0aef6f379275c3bffe37179f78c14 540 TIGRFAM TIGR00704 NaPi_cotrn_rel: Na/Pi-cotransporter II-related protein 7 314 2.0E-68 T 14-10-2018 IPR004633 Na/Pi-cotransporter II-related/YqeW-like protein GO:0016020 DB29_00289 d5c0aef6f379275c3bffe37179f78c14 540 Gene3D G3DSA:1.20.58.220 448 539 2.7E-23 T 14-10-2018 IPR038078 PhoU-like domain superfamily DB29_00289 d5c0aef6f379275c3bffe37179f78c14 540 SUPERFAMILY SSF109755 334 538 3.24E-53 T 14-10-2018 DB29_00289 d5c0aef6f379275c3bffe37179f78c14 540 Pfam PF02690 Na+/Pi-cotransporter 146 259 2.0E-17 T 14-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 DB29_00289 d5c0aef6f379275c3bffe37179f78c14 540 Pfam PF02690 Na+/Pi-cotransporter 17 152 4.3E-50 T 14-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 DB29_00289 d5c0aef6f379275c3bffe37179f78c14 540 Pfam PF01895 PhoU domain 452 536 2.6E-19 T 14-10-2018 IPR026022 PhoU domain DB29_00289 d5c0aef6f379275c3bffe37179f78c14 540 Pfam PF01895 PhoU domain 348 432 3.3E-14 T 14-10-2018 IPR026022 PhoU domain DB29_00289 d5c0aef6f379275c3bffe37179f78c14 540 Gene3D G3DSA:1.20.58.220 338 445 4.4E-16 T 14-10-2018 IPR038078 PhoU-like domain superfamily DB29_03963 7bcd978e8309d43f3f6cbe404834ea86 62 Pfam PF00830 Ribosomal L28 family 3 58 1.2E-20 T 14-10-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB29_03963 7bcd978e8309d43f3f6cbe404834ea86 62 Gene3D G3DSA:2.30.170.40 19 62 1.1E-18 T 14-10-2018 IPR037147 Ribosomal protein L28/L24 superfamily GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB29_03963 7bcd978e8309d43f3f6cbe404834ea86 62 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 56 2.1E-23 T 14-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DB29_03963 7bcd978e8309d43f3f6cbe404834ea86 62 SUPERFAMILY SSF143800 1 60 1.96E-23 T 14-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB29_03963 7bcd978e8309d43f3f6cbe404834ea86 62 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 62 19.125 T 14-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DB29_02487 28f8131b195e357d3cc69ff7e791f5ce 320 Pfam PF08279 HTH domain 8 60 8.7E-12 T 14-10-2018 IPR013196 Helix-turn-helix, type 11 DB29_02487 28f8131b195e357d3cc69ff7e791f5ce 320 Pfam PF13280 WYL domain 139 313 1.2E-28 T 14-10-2018 IPR026881 WYL domain DB29_02487 28f8131b195e357d3cc69ff7e791f5ce 320 Gene3D G3DSA:1.10.10.10 2 64 1.5E-8 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_02487 28f8131b195e357d3cc69ff7e791f5ce 320 SUPERFAMILY SSF46785 2 62 1.05E-7 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_01805 01b4c82efb5961002326d136d570675b 288 Gene3D G3DSA:3.40.50.300 2 264 3.4E-47 T 14-10-2018 DB29_01805 01b4c82efb5961002326d136d570675b 288 SMART SM00382 28 207 1.8E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_01805 01b4c82efb5961002326d136d570675b 288 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB29_01805 01b4c82efb5961002326d136d570675b 288 Pfam PF00005 ABC transporter 20 158 1.0E-24 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB29_01805 01b4c82efb5961002326d136d570675b 288 SUPERFAMILY SSF52540 2 222 1.12E-48 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_03837 8d4d5b2ee938cb94725dd65d0c61f9b6 240 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 121 156 3.2E-10 T 14-10-2018 IPR001451 Hexapeptide repeat DB29_03837 8d4d5b2ee938cb94725dd65d0c61f9b6 240 Pfam PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal 4 87 6.8E-34 T 14-10-2018 IPR013710 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase, N-terminal GO:0047200 KEGG: 00300+2.3.1.89|MetaCyc: PWY-2941 DB29_03837 8d4d5b2ee938cb94725dd65d0c61f9b6 240 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 165 200 8.2E-9 T 14-10-2018 IPR001451 Hexapeptide repeat DB29_03837 8d4d5b2ee938cb94725dd65d0c61f9b6 240 SUPERFAMILY SSF51161 88 223 3.23E-49 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily DB29_03837 8d4d5b2ee938cb94725dd65d0c61f9b6 240 Gene3D G3DSA:2.160.10.10 85 236 7.1E-49 T 14-10-2018 DB29_03837 8d4d5b2ee938cb94725dd65d0c61f9b6 240 Hamap MF_01691 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase [dapH]. 1 235 45.48 T 14-10-2018 IPR019873 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase, DapH GO:0009089|GO:0047200 KEGG: 00300+2.3.1.89|MetaCyc: PWY-2941 DB29_03837 8d4d5b2ee938cb94725dd65d0c61f9b6 240 Gene3D G3DSA:3.30.70.250 1 84 7.3E-32 T 14-10-2018 DB29_03837 8d4d5b2ee938cb94725dd65d0c61f9b6 240 TIGRFAM TIGR03532 DapD_Ac: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase 6 236 5.8E-115 T 14-10-2018 IPR019873 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase, DapH GO:0009089|GO:0047200 KEGG: 00300+2.3.1.89|MetaCyc: PWY-2941 DB29_03837 8d4d5b2ee938cb94725dd65d0c61f9b6 240 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 174 202 - T 14-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 DB29_03646 20f83cf6c14f206b104a90dd93275638 187 Pfam PF02632 BioY family 27 169 9.3E-35 T 14-10-2018 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 DB29_03646 20f83cf6c14f206b104a90dd93275638 187 Gene3D G3DSA:1.10.1760.20 1 174 8.5E-48 T 14-10-2018 DB29_03646 20f83cf6c14f206b104a90dd93275638 187 PIRSF PIRSF016661 1 177 2.6E-51 T 14-10-2018 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 DB29_03010 e568c0d616d87cd6988d0f38ec13a440 399 SMART SM00710 207 241 22.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat DB29_03010 e568c0d616d87cd6988d0f38ec13a440 399 SMART SM00710 106 139 75.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat DB29_03010 e568c0d616d87cd6988d0f38ec13a440 399 SMART SM00710 270 292 3.8 T 14-10-2018 IPR006626 Parallel beta-helix repeat DB29_03010 e568c0d616d87cd6988d0f38ec13a440 399 SMART SM00710 329 350 3500.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat DB29_03010 e568c0d616d87cd6988d0f38ec13a440 399 SMART SM00710 242 263 110.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat DB29_03010 e568c0d616d87cd6988d0f38ec13a440 399 SMART SM00710 172 194 730.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat DB29_03010 e568c0d616d87cd6988d0f38ec13a440 399 SMART SM00710 75 104 1100.0 T 14-10-2018 IPR006626 Parallel beta-helix repeat DB29_03010 e568c0d616d87cd6988d0f38ec13a440 399 Gene3D G3DSA:2.160.20.10 1 396 9.9E-51 T 14-10-2018 IPR012334 Pectin lyase fold DB29_03010 e568c0d616d87cd6988d0f38ec13a440 399 SUPERFAMILY SSF51126 2 375 1.63E-44 T 14-10-2018 IPR011050 Pectin lyase fold/virulence factor DB29_03010 e568c0d616d87cd6988d0f38ec13a440 399 Pfam PF13229 Right handed beta helix region 99 294 1.9E-9 T 14-10-2018 IPR039448 Right handed beta helix domain DB29_02800 222fef5d1bc50a39c1d23016026a81dd 204 SMART SM00421 134 191 1.1E-8 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DB29_02800 222fef5d1bc50a39c1d23016026a81dd 204 SUPERFAMILY SSF52172 14 147 2.7E-9 T 14-10-2018 IPR011006 CheY-like superfamily DB29_02800 222fef5d1bc50a39c1d23016026a81dd 204 ProSitePatterns PS00622 LuxR-type HTH domain signature. 151 178 - T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DB29_02800 222fef5d1bc50a39c1d23016026a81dd 204 Pfam PF00196 Bacterial regulatory proteins, luxR family 137 187 1.6E-11 T 14-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 DB29_02800 222fef5d1bc50a39c1d23016026a81dd 204 Gene3D G3DSA:3.40.50.12740 6 193 1.0E-25 T 14-10-2018 DB29_02800 222fef5d1bc50a39c1d23016026a81dd 204 SUPERFAMILY SSF46894 127 191 2.11E-13 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DB29_02910 a63f01173425792182460da128d4fa7e 262 SUPERFAMILY SSF55729 2 260 8.74E-15 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase DB29_02910 a63f01173425792182460da128d4fa7e 262 Gene3D G3DSA:3.40.630.30 121 251 1.8E-17 T 14-10-2018 DB29_02910 a63f01173425792182460da128d4fa7e 262 Pfam PF12746 GNAT acetyltransferase 157 255 5.8E-11 T 14-10-2018 IPR027365 GNAT acetyltransferase YdfB-like DB29_03793 014f62c7820d9f8abc3afdd9c4fad6b6 397 Pfam PF09546 Stage III sporulation protein AE (spore_III_AE) 74 389 7.1E-106 T 14-10-2018 IPR014194 Sporulation stage III, protein AE DB29_03793 014f62c7820d9f8abc3afdd9c4fad6b6 397 TIGRFAM TIGR02829 spore_III_AE: stage III sporulation protein AE 7 389 3.0E-134 T 14-10-2018 IPR014194 Sporulation stage III, protein AE DB29_00896 8a8634a1dea23574a4f240a0a541c70e 459 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 440 450 - T 14-10-2018 IPR030391 RNA methyltransferase TrmA, conserved site DB29_00896 8a8634a1dea23574a4f240a0a541c70e 459 SUPERFAMILY SSF50249 4 65 6.28E-17 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DB29_00896 8a8634a1dea23574a4f240a0a541c70e 459 Gene3D G3DSA:2.40.50.140 1 85 5.9E-26 T 14-10-2018 DB29_00896 8a8634a1dea23574a4f240a0a541c70e 459 Gene3D G3DSA:3.40.1350.30 134 289 1.5E-128 T 14-10-2018 DB29_00896 8a8634a1dea23574a4f240a0a541c70e 459 Gene3D G3DSA:3.40.50.150 87 452 1.5E-128 T 14-10-2018 DB29_00896 8a8634a1dea23574a4f240a0a541c70e 459 SUPERFAMILY SSF53335 74 455 1.72E-96 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DB29_00896 8a8634a1dea23574a4f240a0a541c70e 459 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 388 419 - T 14-10-2018 IPR030390 RNA methyltransferase TrmA, active site DB29_00896 8a8634a1dea23574a4f240a0a541c70e 459 Pfam PF01938 TRAM domain 9 65 6.0E-14 T 14-10-2018 IPR002792 TRAM domain DB29_00896 8a8634a1dea23574a4f240a0a541c70e 459 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 275 451 1.5E-21 T 14-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 DB29_00896 8a8634a1dea23574a4f240a0a541c70e 459 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 22 450 5.0E-180 T 14-10-2018 DB29_04061 8906c115258132a77f30a589580af6e3 193 PIRSF PIRSF001390 1 193 1.2E-73 T 14-10-2018 IPR014214 Dipicolinic acid synthetase, subunit B DB29_04061 8906c115258132a77f30a589580af6e3 193 SUPERFAMILY SSF52507 3 183 6.93E-29 T 14-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 DB29_04061 8906c115258132a77f30a589580af6e3 193 TIGRFAM TIGR02852 spore_dpaB: dipicolinic acid synthetase, B subunit 5 191 6.5E-101 T 14-10-2018 IPR014214 Dipicolinic acid synthetase, subunit B DB29_04061 8906c115258132a77f30a589580af6e3 193 Pfam PF02441 Flavoprotein 5 166 7.1E-18 T 14-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 DB29_04061 8906c115258132a77f30a589580af6e3 193 Gene3D G3DSA:3.40.50.1950 1 193 9.1E-53 T 14-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 DB29_03732 16fd3949f30818be9205668aa98a3a09 112 SUPERFAMILY SSF52833 1 110 9.2E-26 T 14-10-2018 IPR036249 Thioredoxin-like superfamily DB29_03732 16fd3949f30818be9205668aa98a3a09 112 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 1 95 8.0E-23 T 14-10-2018 IPR006504 Transcriptional regulator Spx/MgsR DB29_03732 16fd3949f30818be9205668aa98a3a09 112 Pfam PF03960 ArsC family 36 94 6.5E-21 T 14-10-2018 IPR006660 Arsenate reductase-like DB29_03732 16fd3949f30818be9205668aa98a3a09 112 Gene3D G3DSA:3.40.30.10 1 112 3.9E-32 T 14-10-2018 DB29_01874 76db5a8fcc12474fa840d7d1ce61ee91 290 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB29_01874 76db5a8fcc12474fa840d7d1ce61ee91 290 SUPERFAMILY SSF52540 15 243 9.76E-60 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_01874 76db5a8fcc12474fa840d7d1ce61ee91 290 Gene3D G3DSA:3.40.50.300 18 286 4.2E-72 T 14-10-2018 DB29_01874 76db5a8fcc12474fa840d7d1ce61ee91 290 TIGRFAM TIGR04520 ECF_ATPase_1: energy-coupling factor transporter ATPase 22 284 7.2E-96 T 14-10-2018 IPR030947 Energy-coupling factor transporter ATP-binding protein EcfA1 DB29_01874 76db5a8fcc12474fa840d7d1ce61ee91 290 Pfam PF00005 ABC transporter 37 182 4.4E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB29_01874 76db5a8fcc12474fa840d7d1ce61ee91 290 SMART SM00382 46 229 2.2E-15 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_01202 420d9c047dfe2329a2396a3e65c662db 250 SUPERFAMILY SSF55166 85 229 8.37E-38 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 DB29_01202 420d9c047dfe2329a2396a3e65c662db 250 Gene3D G3DSA:3.30.1380.10 38 250 5.4E-77 T 14-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 DB29_01202 420d9c047dfe2329a2396a3e65c662db 250 Pfam PF02557 D-alanyl-D-alanine carboxypeptidase 101 227 2.3E-42 T 14-10-2018 IPR003709 Peptidase M15B GO:0006508|GO:0008233 DB29_00572 7e7391abc25d8ef58ea3a377b3c297d4 232 SUPERFAMILY SSF52540 4 213 4.64E-33 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_00572 7e7391abc25d8ef58ea3a377b3c297d4 232 SMART SM00382 28 204 1.4E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_00572 7e7391abc25d8ef58ea3a377b3c297d4 232 Pfam PF00005 ABC transporter 20 153 1.2E-15 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB29_00572 7e7391abc25d8ef58ea3a377b3c297d4 232 Gene3D G3DSA:3.40.50.300 1 230 6.9E-36 T 14-10-2018 DB29_01791 d58a4da9e158a4573d1e53975de1c6b6 329 Pfam PF00579 tRNA synthetases class I (W and Y) 4 284 2.6E-60 T 14-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 DB29_01791 d58a4da9e158a4573d1e53975de1c6b6 329 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 2 329 35.136 T 14-10-2018 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2|Reactome: R-HSA-379726 DB29_01791 d58a4da9e158a4573d1e53975de1c6b6 329 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 3 329 1.9E-90 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 DB29_01791 d58a4da9e158a4573d1e53975de1c6b6 329 Gene3D G3DSA:3.40.50.620 6 329 2.8E-114 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DB29_01791 d58a4da9e158a4573d1e53975de1c6b6 329 Gene3D G3DSA:1.10.240.10 196 298 2.8E-114 T 14-10-2018 DB29_01791 d58a4da9e158a4573d1e53975de1c6b6 329 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 11 20 - T 14-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 DB29_01791 d58a4da9e158a4573d1e53975de1c6b6 329 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 201 211 9.9E-22 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 DB29_01791 d58a4da9e158a4573d1e53975de1c6b6 329 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 15 31 9.9E-22 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 DB29_01791 d58a4da9e158a4573d1e53975de1c6b6 329 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 67 86 9.9E-22 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 DB29_01791 d58a4da9e158a4573d1e53975de1c6b6 329 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 150 171 9.9E-22 T 14-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 DB29_01791 d58a4da9e158a4573d1e53975de1c6b6 329 SUPERFAMILY SSF52374 4 329 6.44E-85 T 14-10-2018 DB29_02035 f57e2707398bae0ffec7c6be13aa039c 397 SUPERFAMILY SSF55031 193 285 7.48E-25 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain DB29_02035 f57e2707398bae0ffec7c6be13aa039c 397 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 17 380 1.3E-101 T 14-10-2018 IPR017439 Amidohydrolase GO:0016787 DB29_02035 f57e2707398bae0ffec7c6be13aa039c 397 Gene3D G3DSA:3.30.70.360 190 303 3.2E-117 T 14-10-2018 DB29_02035 f57e2707398bae0ffec7c6be13aa039c 397 SUPERFAMILY SSF53187 6 395 1.92E-73 T 14-10-2018 DB29_02035 f57e2707398bae0ffec7c6be13aa039c 397 Pfam PF01546 Peptidase family M20/M25/M40 75 388 8.5E-30 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 DB29_02035 f57e2707398bae0ffec7c6be13aa039c 397 Gene3D G3DSA:3.40.630.10 18 378 3.2E-117 T 14-10-2018 DB29_02035 f57e2707398bae0ffec7c6be13aa039c 397 PIRSF PIRSF005962 4 397 2.1E-103 T 14-10-2018 IPR017439 Amidohydrolase GO:0016787 DB29_02035 f57e2707398bae0ffec7c6be13aa039c 397 Pfam PF07687 Peptidase dimerisation domain 195 285 1.3E-12 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain DB29_01750 1fa1209db3ba95ba550eba0b4577d80d 310 Gene3D G3DSA:3.30.420.40 17 296 1.8E-66 T 14-10-2018 DB29_01750 1fa1209db3ba95ba550eba0b4577d80d 310 Gene3D G3DSA:3.30.420.40 134 284 1.8E-66 T 14-10-2018 DB29_01750 1fa1209db3ba95ba550eba0b4577d80d 310 SUPERFAMILY SSF53067 16 300 6.49E-51 T 14-10-2018 DB29_01750 1fa1209db3ba95ba550eba0b4577d80d 310 Pfam PF00480 ROK family 17 300 4.5E-38 T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 DB29_00001 f86f7b8fc03a459651e60245d3f82714 171 Gene3D G3DSA:1.25.10.10 1 170 9.3E-18 T 14-10-2018 IPR011989 Armadillo-like helical DB29_00001 f86f7b8fc03a459651e60245d3f82714 171 Pfam PF13646 HEAT repeats 38 123 2.8E-12 T 14-10-2018 DB29_00001 f86f7b8fc03a459651e60245d3f82714 171 SUPERFAMILY SSF48371 23 124 3.5E-17 T 14-10-2018 IPR016024 Armadillo-type fold DB29_04357 a69a5232ca5e7a06d2efd606e8cdd587 506 PIRSF PIRSF005690 11 495 3.6E-152 T 14-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 DB29_04357 a69a5232ca5e7a06d2efd606e8cdd587 506 Pfam PF03323 Bacillus/Clostridium GerA spore germination protein 39 479 5.7E-159 T 14-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 DB29_01736 d7df18a9ab82199db02075a3fd315b0d 442 Pfam PF02447 GntP family permease 7 202 2.9E-9 T 14-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 DB29_02968 174643982f20674a46922e90884bac6e 425 SUPERFAMILY SSF52954 345 423 2.11E-18 T 14-10-2018 DB29_02968 174643982f20674a46922e90884bac6e 425 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 7 422 1.4E-117 T 14-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 DB29_02968 174643982f20674a46922e90884bac6e 425 Gene3D G3DSA:3.30.930.10 4 335 2.4E-99 T 14-10-2018 DB29_02968 174643982f20674a46922e90884bac6e 425 Pfam PF13393 Histidyl-tRNA synthetase 11 327 2.6E-43 T 14-10-2018 DB29_02968 174643982f20674a46922e90884bac6e 425 Gene3D G3DSA:3.40.50.800 339 423 7.6E-22 T 14-10-2018 IPR036621 Anticodon-binding domain superfamily DB29_02968 174643982f20674a46922e90884bac6e 425 PIRSF PIRSF001549 2 424 1.5E-119 T 14-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 DB29_02968 174643982f20674a46922e90884bac6e 425 SUPERFAMILY SSF55681 6 333 7.37E-72 T 14-10-2018 DB29_02968 174643982f20674a46922e90884bac6e 425 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 4 425 24.44 T 14-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 DB29_02968 174643982f20674a46922e90884bac6e 425 Pfam PF03129 Anticodon binding domain 347 423 1.7E-14 T 14-10-2018 IPR004154 Anticodon-binding DB29_02850 a19d29d56adeca1c197807b09a01220b 327 Pfam PF01032 FecCD transport family 13 319 1.1E-84 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 DB29_02850 a19d29d56adeca1c197807b09a01220b 327 Gene3D G3DSA:1.10.3470.10 1 325 2.2E-86 T 14-10-2018 IPR037294 ABC transporter, BtuC-like DB29_02850 a19d29d56adeca1c197807b09a01220b 327 SUPERFAMILY SSF81345 3 319 9.15E-73 T 14-10-2018 IPR037294 ABC transporter, BtuC-like DB29_03661 c1695fc98faed0cad0121dce938135c2 158 Pfam PF05163 DinB family 1 155 1.5E-25 T 14-10-2018 IPR007837 DNA damage-inducible protein DinB DB29_03661 c1695fc98faed0cad0121dce938135c2 158 SUPERFAMILY SSF109854 7 152 7.63E-32 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes DB29_03661 c1695fc98faed0cad0121dce938135c2 158 Gene3D G3DSA:1.20.120.450 1 149 6.6E-41 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes DB29_01035 ff03f2e7dccc1e12959088b123794bd6 204 SMART SM01120 30 198 1.7E-72 T 14-10-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 DB29_01035 ff03f2e7dccc1e12959088b123794bd6 204 Gene3D G3DSA:1.25.40.340 1 202 8.2E-60 T 14-10-2018 IPR036117 DhaL domain superfamily GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 DB29_01035 ff03f2e7dccc1e12959088b123794bd6 204 SUPERFAMILY SSF101473 2 198 1.7E-56 T 14-10-2018 IPR036117 DhaL domain superfamily GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 DB29_01035 ff03f2e7dccc1e12959088b123794bd6 204 Pfam PF02734 DAK2 domain 31 197 9.1E-53 T 14-10-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 DB29_01035 ff03f2e7dccc1e12959088b123794bd6 204 TIGRFAM TIGR02365 dha_L_ycgS: dihydroxyacetone kinase, L subunit 7 197 1.5E-66 T 14-10-2018 IPR012737 Dihydroxyacetone kinase, subunit L GO:0016772 KEGG: 00561+2.7.1.121 DB29_00259 dba7be9d7fceb0b1e524e7de064a9d7e 243 Pfam PF00756 Putative esterase 15 237 9.4E-46 T 14-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 DB29_00259 dba7be9d7fceb0b1e524e7de064a9d7e 243 Gene3D G3DSA:3.40.50.1820 2 241 3.5E-48 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DB29_00259 dba7be9d7fceb0b1e524e7de064a9d7e 243 SUPERFAMILY SSF53474 7 238 1.24E-33 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DB29_02901 18e2ee6a9bbb2ad3d9de1ac361a5b676 239 PIRSF PIRSF031509 1 239 7.0E-66 T 14-10-2018 IPR016975 Cell wall-active antibiotic response protein GO:0016021 DB29_02901 18e2ee6a9bbb2ad3d9de1ac361a5b676 239 Pfam PF09922 Cell wall-active antibiotics response 4TMS YvqF 124 236 4.6E-35 T 14-10-2018 IPR024425 Cell wall-active antibiotics response 4TMS YvqF DB29_00662 35aa78cfab46fa1533bf833c40912af4 320 SUPERFAMILY SSF52283 6 123 2.34E-15 T 14-10-2018 DB29_00662 35aa78cfab46fa1533bf833c40912af4 320 SUPERFAMILY SSF51735 103 283 1.02E-43 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_00662 35aa78cfab46fa1533bf833c40912af4 320 Gene3D G3DSA:3.40.50.720 20 309 1.5E-87 T 14-10-2018 DB29_00662 35aa78cfab46fa1533bf833c40912af4 320 Gene3D G3DSA:3.40.50.720 99 279 1.5E-87 T 14-10-2018 DB29_00662 35aa78cfab46fa1533bf833c40912af4 320 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 14 314 3.1E-16 T 14-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 DB29_00662 35aa78cfab46fa1533bf833c40912af4 320 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 110 283 5.8E-48 T 14-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 DB29_01592 64afbcb8eddb1647c15edb69163e5042 195 Gene3D G3DSA:3.40.50.880 1 195 3.6E-72 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like DB29_01592 64afbcb8eddb1647c15edb69163e5042 195 PIRSF PIRSF005639 1 190 3.2E-76 T 14-10-2018 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO GO:0004359|GO:0042819|GO:0042823 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 DB29_01592 64afbcb8eddb1647c15edb69163e5042 195 SUPERFAMILY SSF52317 2 187 4.31E-53 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like DB29_01592 64afbcb8eddb1647c15edb69163e5042 195 ProSitePatterns PS01236 PdxT/SNO family family signature. 40 50 - T 14-10-2018 IPR021196 PdxT/SNO family, conserved site KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 DB29_01592 64afbcb8eddb1647c15edb69163e5042 195 Hamap MF_01615 Pyridoxal 5'-phosphate synthase subunit PdxT [pdxT]. 3 185 38.22 T 14-10-2018 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO GO:0004359|GO:0042819|GO:0042823 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 DB29_01592 64afbcb8eddb1647c15edb69163e5042 195 Pfam PF01174 SNO glutamine amidotransferase family 5 187 3.3E-71 T 14-10-2018 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO GO:0004359|GO:0042819|GO:0042823 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 DB29_01592 64afbcb8eddb1647c15edb69163e5042 195 TIGRFAM TIGR03800 PLP_synth_Pdx2: pyridoxal 5'-phosphate synthase, glutaminase subunit Pdx2 2 184 4.5E-81 T 14-10-2018 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO GO:0004359|GO:0042819|GO:0042823 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 DB29_03471 fe521d9fa39e400ac48fcb1078d27557 213 Gene3D G3DSA:3.40.50.150 1 211 2.0E-71 T 14-10-2018 DB29_03471 fe521d9fa39e400ac48fcb1078d27557 213 Pfam PF02390 Putative methyltransferase 39 207 1.1E-46 T 14-10-2018 DB29_03471 fe521d9fa39e400ac48fcb1078d27557 213 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 26 210 9.1E-56 T 14-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 DB29_03471 fe521d9fa39e400ac48fcb1078d27557 213 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 1 212 29.504 T 14-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 DB29_03471 fe521d9fa39e400ac48fcb1078d27557 213 SUPERFAMILY SSF53335 37 208 1.84E-30 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DB29_00070 ca4f640b098d09e4028c68bfd3c855dc 290 Gene3D G3DSA:3.30.70.120 192 268 7.2E-26 T 14-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal DB29_00070 ca4f640b098d09e4028c68bfd3c855dc 290 PIRSF PIRSF006483 1 283 1.2E-90 T 14-10-2018 IPR003740 Uncharacterised membrane protein YitT DB29_00070 ca4f640b098d09e4028c68bfd3c855dc 290 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 221 275 1.6E-22 T 14-10-2018 IPR019264 Domain of unknown function DUF2179 DB29_00070 ca4f640b098d09e4028c68bfd3c855dc 290 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 9 215 7.2E-60 T 14-10-2018 IPR003740 Uncharacterised membrane protein YitT DB29_00612 16707737dd5aa417ee383d3d890b7ac5 46 Gene3D G3DSA:3.30.720.100 1 37 5.1E-7 T 14-10-2018 DB29_00612 16707737dd5aa417ee383d3d890b7ac5 46 Pfam PF06983 3-demethylubiquinone-9 3-methyltransferase 1 30 2.1E-5 T 14-10-2018 IPR028973 PhnB-like DB29_01571 2ecf99124551e742d7f4cc485fccd795 306 Pfam PF00701 Dihydrodipicolinate synthetase family 6 294 1.9E-79 T 14-10-2018 IPR002220 DapA-like GO:0016829 DB29_01571 2ecf99124551e742d7f4cc485fccd795 306 SMART SM01130 5 296 9.3E-64 T 14-10-2018 IPR002220 DapA-like GO:0016829 DB29_01571 2ecf99124551e742d7f4cc485fccd795 306 SUPERFAMILY SSF51569 5 295 6.8E-60 T 14-10-2018 DB29_01571 2ecf99124551e742d7f4cc485fccd795 306 Gene3D G3DSA:3.20.20.70 1 304 1.8E-76 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DB29_01571 2ecf99124551e742d7f4cc485fccd795 306 PIRSF PIRSF001365 1 304 2.1E-49 T 14-10-2018 IPR002220 DapA-like GO:0016829 DB29_01571 2ecf99124551e742d7f4cc485fccd795 306 TIGRFAM TIGR03249 KdgD: 5-dehydro-4-deoxyglucarate dehydratase 1 295 5.9E-144 T 14-10-2018 IPR017655 5-dehydro-4-deoxyglucarate dehydratase GO:0016052|GO:0047448 KEGG: 00053+4.2.1.41|MetaCyc: PWY-6486|MetaCyc: PWY-6497|MetaCyc: PWY-6499|MetaCyc: PWY-6501 DB29_00195 b867d037a03da0610bd1503ff9a80600 486 Pfam PF03323 Bacillus/Clostridium GerA spore germination protein 17 471 3.3E-147 T 14-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 DB29_00195 b867d037a03da0610bd1503ff9a80600 486 PIRSF PIRSF005690 1 486 1.0E-125 T 14-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 DB29_00548 b9544c4054b7cdf9cef9232a77bc20d4 327 Pfam PF00005 ABC transporter 26 168 8.8E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB29_00548 b9544c4054b7cdf9cef9232a77bc20d4 327 SUPERFAMILY SSF52540 9 232 3.59E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_00548 b9544c4054b7cdf9cef9232a77bc20d4 327 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB29_00548 b9544c4054b7cdf9cef9232a77bc20d4 327 TIGRFAM TIGR01188 drrA: daunorubicin resistance ABC transporter, ATP-binding protein 17 313 5.9E-115 T 14-10-2018 IPR005894 Daunorubicin resistance ABC transporter ATP-binding subunit DrrA GO:0005524|GO:0043215|GO:1900753 DB29_00548 b9544c4054b7cdf9cef9232a77bc20d4 327 SMART SM00382 34 217 9.7E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_00548 b9544c4054b7cdf9cef9232a77bc20d4 327 Gene3D G3DSA:3.40.50.300 2 248 1.9E-67 T 14-10-2018 DB29_00548 b9544c4054b7cdf9cef9232a77bc20d4 327 Pfam PF13732 Domain of unknown function (DUF4162) 222 311 7.0E-8 T 14-10-2018 IPR025302 Domain of unknown function DUF4162 DB29_02792 a280651577c3c35a141b512731da9b24 338 SUPERFAMILY SSF53822 60 330 1.78E-26 T 14-10-2018 IPR028082 Periplasmic binding protein-like I DB29_02792 a280651577c3c35a141b512731da9b24 338 SMART SM00354 2 72 7.8E-16 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DB29_02792 a280651577c3c35a141b512731da9b24 338 SUPERFAMILY SSF47413 2 58 2.73E-16 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DB29_02792 a280651577c3c35a141b512731da9b24 338 Gene3D G3DSA:3.40.50.2300 164 333 5.3E-46 T 14-10-2018 DB29_02792 a280651577c3c35a141b512731da9b24 338 Gene3D G3DSA:1.10.260.40 1 60 2.1E-20 T 14-10-2018 DB29_02792 a280651577c3c35a141b512731da9b24 338 Gene3D G3DSA:3.40.50.2300 71 325 5.3E-46 T 14-10-2018 DB29_02792 a280651577c3c35a141b512731da9b24 338 Pfam PF00356 Bacterial regulatory proteins, lacI family 6 49 9.8E-13 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DB29_02792 a280651577c3c35a141b512731da9b24 338 Pfam PF13407 Periplasmic binding protein domain 63 308 1.2E-22 T 14-10-2018 IPR025997 Periplasmic binding protein DB29_03917 aeff0b8e57396fce185d1b96be0b2248 365 Pfam PF01098 Cell cycle protein 12 364 1.2E-124 T 14-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DB29_03917 aeff0b8e57396fce185d1b96be0b2248 365 TIGRFAM TIGR02615 spoVE: stage V sporulation protein E 9 362 7.6E-164 T 14-10-2018 IPR013438 Sporulation stage V, protein E DB29_03917 aeff0b8e57396fce185d1b96be0b2248 365 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 322 346 - T 14-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DB29_03917 aeff0b8e57396fce185d1b96be0b2248 365 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 10 363 1.1E-129 T 14-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DB29_03806 2b4e3ab6df961db3de3098302d677b8f 270 Pfam PF01479 S4 domain 5 48 1.1E-9 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB29_03806 2b4e3ab6df961db3de3098302d677b8f 270 Gene3D G3DSA:3.40.50.150 64 270 5.2E-81 T 14-10-2018 DB29_03806 2b4e3ab6df961db3de3098302d677b8f 270 SMART SM00363 5 70 1.3E-8 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB29_03806 2b4e3ab6df961db3de3098302d677b8f 270 Gene3D G3DSA:3.10.290.10 1 63 6.7E-24 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 DB29_03806 2b4e3ab6df961db3de3098302d677b8f 270 TIGRFAM TIGR00478 tly: TlyA family rRNA methyltransferase/putative hemolysin 6 238 2.3E-84 T 14-10-2018 IPR004538 Haemolysin A /rRNA methyltransferase TlyA GO:0003723 DB29_03806 2b4e3ab6df961db3de3098302d677b8f 270 SUPERFAMILY SSF53335 60 244 2.74E-20 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DB29_03806 2b4e3ab6df961db3de3098302d677b8f 270 Pfam PF01728 FtsJ-like methyltransferase 61 244 1.8E-21 T 14-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 DB29_03806 2b4e3ab6df961db3de3098302d677b8f 270 SUPERFAMILY SSF55174 4 70 1.77E-12 T 14-10-2018 DB29_03806 2b4e3ab6df961db3de3098302d677b8f 270 PIRSF PIRSF005578 1 266 4.1E-101 T 14-10-2018 IPR004538 Haemolysin A /rRNA methyltransferase TlyA GO:0003723 DB29_01005 3eee438c059ccb1fc9e1f3299589899d 491 Pfam PF00171 Aldehyde dehydrogenase family 12 477 4.5E-180 T 14-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 DB29_01005 3eee438c059ccb1fc9e1f3299589899d 491 SUPERFAMILY SSF53720 2 481 6.41E-173 T 14-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 DB29_01005 3eee438c059ccb1fc9e1f3299589899d 491 Gene3D G3DSA:3.40.309.10 254 447 6.1E-191 T 14-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 DB29_01005 3eee438c059ccb1fc9e1f3299589899d 491 Gene3D G3DSA:3.40.605.10 11 472 6.1E-191 T 14-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 DB29_01005 3eee438c059ccb1fc9e1f3299589899d 491 TIGRFAM TIGR01804 BADH: betaine-aldehyde dehydrogenase 7 475 1.3E-222 T 14-10-2018 IPR011264 Betaine aldehyde dehydrogenase GO:0008802|GO:0019285|GO:0046872 KEGG: 00260+1.2.1.8|MetaCyc: PWY-3722|MetaCyc: PWY-7494 DB29_01005 3eee438c059ccb1fc9e1f3299589899d 491 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 249 256 - T 14-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 DB29_01005 3eee438c059ccb1fc9e1f3299589899d 491 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 277 288 - T 14-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 DB29_03250 dea15eceeca03d2ec226ca89567e38e2 207 Gene3D G3DSA:3.40.50.880 1 206 2.9E-70 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like DB29_03250 dea15eceeca03d2ec226ca89567e38e2 207 PIRSF PIRSF000495 1 206 4.1E-73 T 14-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 DB29_03250 dea15eceeca03d2ec226ca89567e38e2 207 SUPERFAMILY SSF52317 2 202 8.06E-52 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like DB29_03250 dea15eceeca03d2ec226ca89567e38e2 207 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 1 203 36.081 T 14-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 DB29_03250 dea15eceeca03d2ec226ca89567e38e2 207 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 2 201 6.3E-69 T 14-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 DB29_03250 dea15eceeca03d2ec226ca89567e38e2 207 Pfam PF00117 Glutamine amidotransferase class-I 5 198 5.1E-22 T 14-10-2018 IPR017926 Glutamine amidotransferase DB29_03440 dfb744b6d5bb8cdfee2ee52e11703bcf 263 Pfam PF11299 Protein of unknown function (DUF3100) 18 255 5.1E-86 T 14-10-2018 IPR021450 Protein of unknown function DUF3100 DB29_00949 358cea04a00f8818dc17002e354a4d6b 336 Gene3D G3DSA:1.10.260.40 3 59 1.8E-26 T 14-10-2018 DB29_00949 358cea04a00f8818dc17002e354a4d6b 336 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 14-10-2018 DB29_00949 358cea04a00f8818dc17002e354a4d6b 336 Gene3D G3DSA:3.40.50.2300 62 324 1.7E-70 T 14-10-2018 DB29_00949 358cea04a00f8818dc17002e354a4d6b 336 Gene3D G3DSA:3.40.50.2300 160 329 1.7E-70 T 14-10-2018 DB29_00949 358cea04a00f8818dc17002e354a4d6b 336 SUPERFAMILY SSF53822 60 333 3.81E-69 T 14-10-2018 IPR028082 Periplasmic binding protein-like I DB29_00949 358cea04a00f8818dc17002e354a4d6b 336 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 3.1E-5 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DB29_00949 358cea04a00f8818dc17002e354a4d6b 336 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 3.1E-5 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DB29_00949 358cea04a00f8818dc17002e354a4d6b 336 SMART SM00354 1 71 4.5E-37 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DB29_00949 358cea04a00f8818dc17002e354a4d6b 336 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 1.0E-21 T 14-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 DB29_00949 358cea04a00f8818dc17002e354a4d6b 336 SUPERFAMILY SSF47413 1 59 8.44E-20 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DB29_00949 358cea04a00f8818dc17002e354a4d6b 336 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 60 329 2.5E-35 T 14-10-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain DB29_01759 8c418e875b301d29c7038da7eb68f2c5 433 Gene3D G3DSA:3.40.50.10840 1 231 2.0E-67 T 14-10-2018 IPR037051 Four-carbon acid sugar kinase, N-terminal domain superfamily DB29_01759 8c418e875b301d29c7038da7eb68f2c5 433 Pfam PF17042 Putative nucleotide-binding of sugar-metabolising enzyme 249 420 4.7E-33 T 14-10-2018 IPR031475 Four-carbon acid sugar kinase, C-terminal domain DB29_01759 8c418e875b301d29c7038da7eb68f2c5 433 SUPERFAMILY SSF142764 3 427 9.68E-101 T 14-10-2018 DB29_01759 8c418e875b301d29c7038da7eb68f2c5 433 Gene3D G3DSA:3.40.980.20 237 429 1.1E-29 T 14-10-2018 DB29_01759 8c418e875b301d29c7038da7eb68f2c5 433 Pfam PF07005 Putative sugar-binding N-terminal domain 3 226 2.7E-61 T 14-10-2018 IPR010737 Four-carbon acid sugar kinase, N-terminal domain DB29_03410 575501b02e1782462230f108efc7395d 208 Gene3D G3DSA:1.20.144.10 118 207 3.5E-24 T 14-10-2018 DB29_03410 575501b02e1782462230f108efc7395d 208 Gene3D G3DSA:1.20.144.10 3 117 6.5E-7 T 14-10-2018 DB29_03410 575501b02e1782462230f108efc7395d 208 SMART SM00014 86 198 9.5E-24 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase DB29_03410 575501b02e1782462230f108efc7395d 208 SUPERFAMILY SSF48317 8 204 1.83E-37 T 14-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily DB29_03410 575501b02e1782462230f108efc7395d 208 Pfam PF01569 PAP2 superfamily 89 204 4.0E-22 T 14-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase DB29_01097 b232a0c83b40700b61576b3dd4f2a740 169 SUPERFAMILY SSF47240 36 163 1.77E-19 T 14-10-2018 IPR009078 Ferritin-like superfamily DB29_01097 b232a0c83b40700b61576b3dd4f2a740 169 Pfam PF02915 Rubrerythrin 52 155 7.5E-8 T 14-10-2018 IPR003251 Rubrerythrin GO:0016491|GO:0046872|GO:0055114 DB29_01097 b232a0c83b40700b61576b3dd4f2a740 169 Gene3D G3DSA:1.20.1260.10 29 161 1.0E-10 T 14-10-2018 IPR012347 Ferritin-like DB29_01528 64dd8709630cb26ad49a007eb1ed31db 228 Gene3D G3DSA:3.90.550.10 2 182 3.5E-15 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DB29_01528 64dd8709630cb26ad49a007eb1ed31db 228 SUPERFAMILY SSF53448 4 202 7.88E-21 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DB29_01528 64dd8709630cb26ad49a007eb1ed31db 228 Pfam PF00535 Glycosyl transferase family 2 4 121 1.0E-7 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 DB29_03648 d3dcaca674136b94fd922a3536bb0144 242 Gene3D G3DSA:2.70.70.10 110 240 1.9E-16 T 14-10-2018 IPR011055 Duplicated hybrid motif DB29_03648 d3dcaca674136b94fd922a3536bb0144 242 Pfam PF01551 Peptidase family M23 142 235 2.3E-15 T 14-10-2018 IPR016047 Peptidase M23 DB29_03648 d3dcaca674136b94fd922a3536bb0144 242 SUPERFAMILY SSF51261 83 237 8.37E-14 T 14-10-2018 IPR011055 Duplicated hybrid motif DB29_03071 5f746dc055e3e605d359577ebe6bfa6f 573 Gene3D G3DSA:2.30.40.10 2 339 3.6E-88 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DB29_03071 5f746dc055e3e605d359577ebe6bfa6f 573 SUPERFAMILY SSF51338 1 339 7.38E-14 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DB29_03071 5f746dc055e3e605d359577ebe6bfa6f 573 SUPERFAMILY SSF51556 60 309 1.33E-22 T 14-10-2018 IPR032466 Metal-dependent hydrolase DB29_03071 5f746dc055e3e605d359577ebe6bfa6f 573 Gene3D G3DSA:3.20.20.140 60 304 3.6E-88 T 14-10-2018 DB29_03071 5f746dc055e3e605d359577ebe6bfa6f 573 Pfam PF01979 Amidohydrolase family 57 322 2.9E-18 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 DB29_03071 5f746dc055e3e605d359577ebe6bfa6f 573 Pfam PF13382 Adenine deaminase C-terminal domain 397 562 1.7E-54 T 14-10-2018 IPR026912 Adenine deaminase C-terminal domain KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 DB29_03071 5f746dc055e3e605d359577ebe6bfa6f 573 Hamap MF_01518 Adenine deaminase [ade]. 4 566 31.374 T 14-10-2018 IPR006679 Adenine deaminase GO:0000034|GO:0006146 KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 DB29_03436 a4496cb9b9befeab66089341d54054f3 398 Gene3D G3DSA:1.20.1250.20 2 379 5.0E-42 T 14-10-2018 DB29_03436 a4496cb9b9befeab66089341d54054f3 398 Pfam PF07690 Major Facilitator Superfamily 8 236 3.9E-16 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DB29_03436 a4496cb9b9befeab66089341d54054f3 398 SUPERFAMILY SSF103473 3 388 1.44E-48 T 14-10-2018 IPR036259 MFS transporter superfamily DB29_01819 260d958a49f4575807a6858449e28083 315 Pfam PF01619 Proline dehydrogenase 54 283 8.3E-19 T 14-10-2018 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|Reactome: R-HSA-70688 DB29_01819 260d958a49f4575807a6858449e28083 315 SUPERFAMILY SSF51730 45 304 5.89E-52 T 14-10-2018 IPR029041 FAD-linked oxidoreductase-like DB29_01819 260d958a49f4575807a6858449e28083 315 PIRSF PIRSF000196 9 311 4.8E-109 T 14-10-2018 IPR008219 Proline dehydrogenase, bacteria and archaea GO:0004657|GO:0010133 KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922 DB29_01819 260d958a49f4575807a6858449e28083 315 Gene3D G3DSA:3.20.20.530 33 308 3.3E-64 T 14-10-2018 DB29_01648 400055882bb053f31eb74be857e2375a 394 Gene3D G3DSA:3.40.50.1970 19 175 2.9E-29 T 14-10-2018 DB29_01648 400055882bb053f31eb74be857e2375a 394 Pfam PF13685 Iron-containing alcohol dehydrogenase 27 293 6.8E-80 T 14-10-2018 IPR032837 Glycerol-1-phosphate dehydrogenase KEGG: 00564+1.1.1.261|MetaCyc: PWY-6349 DB29_01648 400055882bb053f31eb74be857e2375a 394 Gene3D G3DSA:1.20.1090.10 177 389 1.1E-56 T 14-10-2018 DB29_01648 400055882bb053f31eb74be857e2375a 394 SUPERFAMILY SSF56796 23 359 2.75E-50 T 14-10-2018 DB29_00809 ce98944e6e4e9bc99e34e363e307799a 48 Pfam PF08970 Sporulation inhibitor A 6 41 4.9E-10 T 14-10-2018 IPR015064 Sporulation inhibitor A DB29_00809 ce98944e6e4e9bc99e34e363e307799a 48 SUPERFAMILY SSF100985 4 44 1.2E-10 T 14-10-2018 IPR036916 Sporulation inhibitor A superfamily DB29_00809 ce98944e6e4e9bc99e34e363e307799a 48 Gene3D G3DSA:1.10.287.1100 6 39 3.1E-12 T 14-10-2018 IPR036916 Sporulation inhibitor A superfamily DB29_01222 196fa901bd9ef065446cc251b6664c71 301 Gene3D G3DSA:2.30.30.40 1 111 2.4E-33 T 14-10-2018 DB29_01222 196fa901bd9ef065446cc251b6664c71 301 Pfam PF00877 NlpC/P60 family 184 291 2.0E-23 T 14-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain DB29_01222 196fa901bd9ef065446cc251b6664c71 301 SUPERFAMILY SSF54001 167 294 4.25E-38 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily DB29_01222 196fa901bd9ef065446cc251b6664c71 301 Gene3D G3DSA:3.90.1720.10 153 283 2.8E-36 T 14-10-2018 DB29_01345 adb6c1acb4321136c3941b60a6b3eb8f 397 Gene3D G3DSA:3.30.70.1250 95 226 1.0E-79 T 14-10-2018 IPR024052 Phosphopentomutase DeoB cap domain superfamily GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 DB29_01345 adb6c1acb4321136c3941b60a6b3eb8f 397 Gene3D G3DSA:3.40.720.10 5 391 1.0E-79 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 DB29_01345 adb6c1acb4321136c3941b60a6b3eb8f 397 Pfam PF01676 Metalloenzyme superfamily 3 381 1.3E-30 T 14-10-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 DB29_01345 adb6c1acb4321136c3941b60a6b3eb8f 397 PIRSF PIRSF001491 1 395 4.2E-99 T 14-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 DB29_01345 adb6c1acb4321136c3941b60a6b3eb8f 397 SUPERFAMILY SSF53649 2 394 3.52E-53 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 DB29_02272 a47abc1892649a586fd2f503b2cf72c4 124 Pfam PF04241 Protein of unknown function (DUF423) 19 106 2.0E-29 T 14-10-2018 IPR006696 Protein of unknown function DUF423 DB29_01555 f0cabf7bdb49d235a3e9a2a2e00acde7 164 Pfam PF00480 ROK family 37 156 1.4E-14 T 14-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 DB29_01555 f0cabf7bdb49d235a3e9a2a2e00acde7 164 SUPERFAMILY SSF53067 5 161 2.51E-30 T 14-10-2018 DB29_01555 f0cabf7bdb49d235a3e9a2a2e00acde7 164 Gene3D G3DSA:3.30.420.40 4 163 1.7E-33 T 14-10-2018 DB29_03315 58c4a5c57076a841991aa4c7fdc0bb7d 222 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 39 220 5.5E-23 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DB29_03315 58c4a5c57076a841991aa4c7fdc0bb7d 222 Gene3D G3DSA:1.10.3720.10 9 222 5.2E-48 T 14-10-2018 IPR035906 MetI-like superfamily DB29_03315 58c4a5c57076a841991aa4c7fdc0bb7d 222 SUPERFAMILY SSF161098 11 211 3.4E-46 T 14-10-2018 IPR035906 MetI-like superfamily DB29_01794 8062cb4883e72811f168c43e9c02dff2 94 SUPERFAMILY SSF55729 3 82 3.94E-16 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase DB29_01794 8062cb4883e72811f168c43e9c02dff2 94 Gene3D G3DSA:3.40.630.30 1 87 3.9E-16 T 14-10-2018 DB29_01794 8062cb4883e72811f168c43e9c02dff2 94 Pfam PF13302 Acetyltransferase (GNAT) domain 6 65 4.7E-7 T 14-10-2018 IPR000182 GNAT domain DB29_03826 846149b41aa17fe6aff0f8d78a9c5b5f 68 SUPERFAMILY SSF55008 1 67 2.09E-20 T 14-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 DB29_03826 846149b41aa17fe6aff0f8d78a9c5b5f 68 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 4 67 2.9E-26 T 14-10-2018 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 Reactome: R-HSA-936837 DB29_03826 846149b41aa17fe6aff0f8d78a9c5b5f 68 ProSitePatterns PS01047 Heavy-metal-associated domain. 8 37 - T 14-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 DB29_03826 846149b41aa17fe6aff0f8d78a9c5b5f 68 PRINTS PR00944 Copper ion binding protein signature 28 41 1.6E-10 T 14-10-2018 IPR000428 Copper ion binding protein GO:0005507|GO:0006825 DB29_03826 846149b41aa17fe6aff0f8d78a9c5b5f 68 PRINTS PR00944 Copper ion binding protein signature 54 67 1.6E-10 T 14-10-2018 IPR000428 Copper ion binding protein GO:0005507|GO:0006825 DB29_03826 846149b41aa17fe6aff0f8d78a9c5b5f 68 PRINTS PR00944 Copper ion binding protein signature 3 15 1.6E-10 T 14-10-2018 IPR000428 Copper ion binding protein GO:0005507|GO:0006825 DB29_03826 846149b41aa17fe6aff0f8d78a9c5b5f 68 PRINTS PR00944 Copper ion binding protein signature 15 28 1.6E-10 T 14-10-2018 IPR000428 Copper ion binding protein GO:0005507|GO:0006825 DB29_03826 846149b41aa17fe6aff0f8d78a9c5b5f 68 Gene3D G3DSA:3.30.70.100 1 68 1.3E-23 T 14-10-2018 DB29_03826 846149b41aa17fe6aff0f8d78a9c5b5f 68 Pfam PF00403 Heavy-metal-associated domain 5 66 2.4E-17 T 14-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 DB29_01766 b8ced7b2060ce25726299c08bfb4ba60 166 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 24 150 3.1E-32 T 14-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ DB29_01837 7ade11015a11de93341da6ae0d23ae70 240 Pfam PF11193 Protein of unknown function (DUF2812) 17 119 1.4E-22 T 14-10-2018 IPR021359 Protein of unknown function DUF2812 DB29_02934 90847af33731e9f0658dfe23ba512dfd 342 SUPERFAMILY SSF50129 2 170 1.52E-54 T 14-10-2018 IPR011032 GroES-like superfamily DB29_02934 90847af33731e9f0658dfe23ba512dfd 342 Pfam PF00107 Zinc-binding dehydrogenase 173 301 2.7E-27 T 14-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 DB29_02934 90847af33731e9f0658dfe23ba512dfd 342 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 59 73 - T 14-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 DB29_02934 90847af33731e9f0658dfe23ba512dfd 342 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 27 131 1.4E-37 T 14-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 DB29_02934 90847af33731e9f0658dfe23ba512dfd 342 SUPERFAMILY SSF51735 136 307 1.14E-36 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_02934 90847af33731e9f0658dfe23ba512dfd 342 SMART SM00829 10 339 3.4E-9 T 14-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 DB29_02934 90847af33731e9f0658dfe23ba512dfd 342 Gene3D G3DSA:3.90.180.10 20 332 2.5E-106 T 14-10-2018 DB29_02934 90847af33731e9f0658dfe23ba512dfd 342 Gene3D G3DSA:3.40.50.720 151 287 2.5E-106 T 14-10-2018 DB29_02205 a264aeac624e830f13a20c6b7b3baff9 547 SUPERFAMILY SSF53474 21 186 2.19E-6 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DB29_01944 6f240e5ae245a967257218b53ee84dfa 295 Gene3D G3DSA:3.90.1280.10 237 293 6.0E-23 T 14-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 DB29_01944 6f240e5ae245a967257218b53ee84dfa 295 PIRSF PIRSF005261 1 292 2.8E-78 T 14-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 DB29_01944 6f240e5ae245a967257218b53ee84dfa 295 Hamap MF_00117 33 kDa chaperonin [hslO]. 2 291 40.443 T 14-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 DB29_01944 6f240e5ae245a967257218b53ee84dfa 295 SUPERFAMILY SSF64397 2 241 5.76E-76 T 14-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 DB29_01944 6f240e5ae245a967257218b53ee84dfa 295 Gene3D G3DSA:3.55.30.10 2 236 2.9E-93 T 14-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 DB29_01944 6f240e5ae245a967257218b53ee84dfa 295 SUPERFAMILY SSF118352 232 290 2.49E-20 T 14-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 DB29_01944 6f240e5ae245a967257218b53ee84dfa 295 Pfam PF01430 Hsp33 protein 3 280 5.6E-90 T 14-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 DB29_02592 83772d324499cd0de2d94eef3e921425 47 Pfam PF05598 Transposase domain (DUF772) 14 45 1.8E-6 T 14-10-2018 IPR008490 Transposase InsH, N-terminal DB29_02018 7df96513ee68689c2cddb1491201e018 199 SMART SM00493 80 166 2.5E-14 T 14-10-2018 IPR006171 TOPRIM domain DB29_02018 7df96513ee68689c2cddb1491201e018 199 TIGRFAM TIGR00615 recR: recombination protein RecR 2 197 1.8E-87 T 14-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 DB29_02018 7df96513ee68689c2cddb1491201e018 199 Hamap MF_00017 Recombination protein RecR [recR]. 1 199 111.21 T 14-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 DB29_02018 7df96513ee68689c2cddb1491201e018 199 Pfam PF02132 RecR protein 39 78 2.6E-16 T 14-10-2018 IPR023628 Recombination protein RecR, C4-type zinc finger DB29_02018 7df96513ee68689c2cddb1491201e018 199 Gene3D G3DSA:1.10.8.420 1 53 7.2E-21 T 14-10-2018 DB29_02018 7df96513ee68689c2cddb1491201e018 199 Gene3D G3DSA:3.40.1360.10 77 199 7.9E-50 T 14-10-2018 DB29_02018 7df96513ee68689c2cddb1491201e018 199 Pfam PF13662 Toprim domain 81 172 4.1E-26 T 14-10-2018 IPR006171 TOPRIM domain DB29_02018 7df96513ee68689c2cddb1491201e018 199 ProSitePatterns PS01300 RecR protein signature. 57 78 - T 14-10-2018 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 DB29_02018 7df96513ee68689c2cddb1491201e018 199 SUPERFAMILY SSF111304 2 199 7.19E-79 T 14-10-2018 IPR023627 Recombination protein RecR DB29_00074 472c3912bb65b5c240f20a684ae40007 206 Pfam PF07187 Protein of unknown function (DUF1405) 31 189 1.3E-55 T 14-10-2018 IPR009845 Protein of unknown function DUF1405 DB29_01060 61f1a45fd3ffa73efdabdb7311d9c2fe 736 Pfam PF13559 Domain of unknown function (DUF4129) 663 719 1.5E-6 T 14-10-2018 IPR025403 Domain of unknown function DUF4129 DB29_01060 61f1a45fd3ffa73efdabdb7311d9c2fe 736 Gene3D G3DSA:3.10.620.30 403 580 6.5E-19 T 14-10-2018 DB29_01060 61f1a45fd3ffa73efdabdb7311d9c2fe 736 SUPERFAMILY SSF54001 369 561 2.24E-42 T 14-10-2018 IPR038765 Papain-like cysteine peptidase superfamily DB29_01060 61f1a45fd3ffa73efdabdb7311d9c2fe 736 Pfam PF01841 Transglutaminase-like superfamily 431 555 2.8E-24 T 14-10-2018 IPR002931 Transglutaminase-like DB29_01060 61f1a45fd3ffa73efdabdb7311d9c2fe 736 SMART SM00460 480 557 1.1E-17 T 14-10-2018 IPR002931 Transglutaminase-like DB29_01212 45333404fe995a479b82b427a29a532a 94 PIRSF PIRSF028784 1 92 3.3E-31 T 14-10-2018 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 DB29_01212 45333404fe995a479b82b427a29a532a 94 Pfam PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) 31 83 1.2E-18 T 14-10-2018 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 DB29_00416 13f5378f59ab8e8462550e5790229715 207 Pfam PF07423 Protein of unknown function (DUF1510) 3 196 3.6E-34 T 14-10-2018 IPR009988 Protein of unknown function DUF1510 DB29_02809 273704ba107e378a15ae52d7a2a37638 120 SUPERFAMILY SSF46785 20 117 3.56E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_02809 273704ba107e378a15ae52d7a2a37638 120 Gene3D G3DSA:1.10.10.10 14 120 2.9E-35 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_02809 273704ba107e378a15ae52d7a2a37638 120 Pfam PF03551 Transcriptional regulator PadR-like family 29 99 3.2E-21 T 14-10-2018 IPR005149 Transcription regulator PadR, N-terminal DB29_04265 17b7cf20f1ede239f7259945c883fc62 509 Gene3D G3DSA:3.40.50.2000 326 488 2.0E-37 T 14-10-2018 DB29_04265 17b7cf20f1ede239f7259945c883fc62 509 Pfam PF00534 Glycosyl transferases group 1 327 481 9.8E-33 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 DB29_04265 17b7cf20f1ede239f7259945c883fc62 509 Gene3D G3DSA:3.40.50.2000 4 147 5.9E-21 T 14-10-2018 DB29_04265 17b7cf20f1ede239f7259945c883fc62 509 Gene3D G3DSA:3.40.50.2000 177 325 1.9E-29 T 14-10-2018 DB29_04265 17b7cf20f1ede239f7259945c883fc62 509 SUPERFAMILY SSF53756 247 503 3.19E-47 T 14-10-2018 DB29_00739 26f57f616e5a242ad8ff0f99990babee 196 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 6 19 1.0E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DB29_00739 26f57f616e5a242ad8ff0f99990babee 196 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 27 50 1.0E-7 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DB29_00739 26f57f616e5a242ad8ff0f99990babee 196 SUPERFAMILY SSF48498 78 193 2.0E-9 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily DB29_00739 26f57f616e5a242ad8ff0f99990babee 196 Gene3D G3DSA:1.10.357.10 51 190 7.5E-17 T 14-10-2018 DB29_00739 26f57f616e5a242ad8ff0f99990babee 196 SUPERFAMILY SSF46689 3 71 9.75E-16 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DB29_00739 26f57f616e5a242ad8ff0f99990babee 196 Pfam PF00440 Bacterial regulatory proteins, tetR family 8 50 6.7E-14 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DB29_00739 26f57f616e5a242ad8ff0f99990babee 196 Gene3D G3DSA:1.10.10.60 2 50 4.7E-16 T 14-10-2018 DB29_00399 82c95a06e2497a28102ff34362d36638 204 Gene3D G3DSA:3.90.79.10 3 201 6.2E-47 T 14-10-2018 DB29_00399 82c95a06e2497a28102ff34362d36638 204 SUPERFAMILY SSF55811 24 195 9.48E-29 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 DB29_00399 82c95a06e2497a28102ff34362d36638 204 Pfam PF00293 NUDIX domain 31 137 9.8E-14 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 DB29_01678 9b38ead585b64aa2c1c41492f78fef9d 690 SUPERFAMILY SSF51735 419 687 1.71E-68 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_01678 9b38ead585b64aa2c1c41492f78fef9d 690 Gene3D G3DSA:3.40.225.10 17 225 1.8E-66 T 14-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily DB29_01678 9b38ead585b64aa2c1c41492f78fef9d 690 Gene3D G3DSA:3.40.50.720 416 686 2.9E-70 T 14-10-2018 DB29_01678 9b38ead585b64aa2c1c41492f78fef9d 690 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 20 217 7.1E-27 T 14-10-2018 IPR001303 Class II aldolase/adducin N-terminal DB29_01678 9b38ead585b64aa2c1c41492f78fef9d 690 TIGRFAM TIGR02632 RhaD_aldol-ADH: rhamnulose-1-phosphate aldolase/alcohol dehydrogenase 19 690 0.0 T 14-10-2018 IPR013454 Bifunctional rhamnulose-1-phosphate aldolase/alcohol dehydrogenase DB29_01678 9b38ead585b64aa2c1c41492f78fef9d 690 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 436 684 6.4E-49 T 14-10-2018 DB29_01678 9b38ead585b64aa2c1c41492f78fef9d 690 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 506 517 1.1E-22 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_01678 9b38ead585b64aa2c1c41492f78fef9d 690 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 430 447 1.1E-22 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_01678 9b38ead585b64aa2c1c41492f78fef9d 690 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 648 668 1.1E-22 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_01678 9b38ead585b64aa2c1c41492f78fef9d 690 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 601 618 1.1E-22 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_01678 9b38ead585b64aa2c1c41492f78fef9d 690 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 580 599 1.1E-22 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_01678 9b38ead585b64aa2c1c41492f78fef9d 690 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 554 570 1.1E-22 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_01678 9b38ead585b64aa2c1c41492f78fef9d 690 SUPERFAMILY SSF53639 18 219 7.85E-38 T 14-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily DB29_01678 9b38ead585b64aa2c1c41492f78fef9d 690 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 429 627 0.0039 T 14-10-2018 DB29_01678 9b38ead585b64aa2c1c41492f78fef9d 690 SMART SM01007 20 219 7.4E-44 T 14-10-2018 IPR001303 Class II aldolase/adducin N-terminal DB29_04281 397acfacf4db2dcbe02932a0abdceb91 237 SUPERFAMILY SSF46785 5 82 1.08E-19 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_04281 397acfacf4db2dcbe02932a0abdceb91 237 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 30 44 1.5E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DB29_04281 397acfacf4db2dcbe02932a0abdceb91 237 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 44 60 1.5E-9 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DB29_04281 397acfacf4db2dcbe02932a0abdceb91 237 SMART SM00866 91 229 6.0E-33 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 DB29_04281 397acfacf4db2dcbe02932a0abdceb91 237 Gene3D G3DSA:3.40.1410.10 71 236 2.6E-38 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily DB29_04281 397acfacf4db2dcbe02932a0abdceb91 237 SUPERFAMILY SSF64288 58 235 1.88E-46 T 14-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily DB29_04281 397acfacf4db2dcbe02932a0abdceb91 237 Gene3D G3DSA:1.10.10.10 3 70 4.3E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_04281 397acfacf4db2dcbe02932a0abdceb91 237 Pfam PF00392 Bacterial regulatory proteins, gntR family 7 70 4.4E-18 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DB29_04281 397acfacf4db2dcbe02932a0abdceb91 237 Pfam PF07702 UTRA domain 93 228 5.7E-33 T 14-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 DB29_04281 397acfacf4db2dcbe02932a0abdceb91 237 SMART SM00345 11 70 5.5E-18 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DB29_03857 3d6ff0506e3eeb1e8edbe2183e75513a 321 SUPERFAMILY SSF161098 92 302 5.23E-19 T 14-10-2018 IPR035906 MetI-like superfamily DB29_03857 3d6ff0506e3eeb1e8edbe2183e75513a 321 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 116 319 5.7E-40 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DB29_03857 3d6ff0506e3eeb1e8edbe2183e75513a 321 Gene3D G3DSA:1.10.3720.10 87 312 4.0E-23 T 14-10-2018 IPR035906 MetI-like superfamily DB29_01259 c02b49d6ee05d47cc80ffddfb621b7eb 363 Gene3D G3DSA:1.10.10.2840 224 355 1.6E-14 T 14-10-2018 DB29_01259 c02b49d6ee05d47cc80ffddfb621b7eb 363 Pfam PF13556 PucR C-terminal helix-turn-helix domain 292 349 9.4E-15 T 14-10-2018 IPR025736 PucR C-terminal helix-turn-helix domain DB29_01259 c02b49d6ee05d47cc80ffddfb621b7eb 363 Pfam PF05651 Putative sugar diacid recognition 2 133 1.3E-44 T 14-10-2018 IPR008599 Putative sugar diacid recognition DB29_00619 83d85b37b99caa0f06409bf30a978420 328 SUPERFAMILY SSF51430 10 314 6.94E-57 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily DB29_00619 83d85b37b99caa0f06409bf30a978420 328 Pfam PF00248 Aldo/keto reductase family 11 314 3.8E-50 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain DB29_00619 83d85b37b99caa0f06409bf30a978420 328 Gene3D G3DSA:3.20.20.100 5 317 1.4E-58 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily DB29_00120 116462f0f48f7c8f3b68d7aa6704dec1 215 Pfam PF13367 Protease prsW family 32 199 3.5E-29 T 14-10-2018 IPR026898 Protease PrsW GO:0008233 DB29_00120 116462f0f48f7c8f3b68d7aa6704dec1 215 PIRSF PIRSF016933 1 215 3.5E-80 T 14-10-2018 IPR023596 Peptidase PrsW, archaeal/bacterial GO:0008233 DB29_00850 da37e33d0fcef80404cff30490b16fe5 343 TIGRFAM TIGR02474 pec_lyase: pectate lyase 50 342 1.6E-124 T 14-10-2018 IPR012669 Pectic acid lyase DB29_00850 da37e33d0fcef80404cff30490b16fe5 343 Pfam PF09492 Pectic acid lyase 50 342 6.1E-118 T 14-10-2018 IPR012669 Pectic acid lyase DB29_00850 da37e33d0fcef80404cff30490b16fe5 343 SUPERFAMILY SSF81853 31 341 4.32E-80 T 14-10-2018 DB29_00850 da37e33d0fcef80404cff30490b16fe5 343 Gene3D G3DSA:1.50.10.20 17 343 1.6E-102 T 14-10-2018 DB29_01378 5ab2975d48d4d7cf83fd43898bcc08d6 115 TIGRFAM TIGR01655 yxeA_fam: conserved hypothetical protein 4 112 3.5E-20 T 14-10-2018 IPR006542 Protein of unknown function DUF1093 DB29_01378 5ab2975d48d4d7cf83fd43898bcc08d6 115 SUPERFAMILY SSF159121 32 112 3.4E-22 T 14-10-2018 IPR036166 YxeA-like superfamily DB29_01378 5ab2975d48d4d7cf83fd43898bcc08d6 115 Gene3D G3DSA:2.40.50.480 30 115 7.4E-27 T 14-10-2018 IPR036166 YxeA-like superfamily DB29_01378 5ab2975d48d4d7cf83fd43898bcc08d6 115 Pfam PF06486 Protein of unknown function (DUF1093) 35 103 7.1E-20 T 14-10-2018 IPR006542 Protein of unknown function DUF1093 DB29_02947 43cb72022bc4f4c776a5948b808fe935 492 SUPERFAMILY SSF52172 1 132 5.41E-17 T 14-10-2018 IPR011006 CheY-like superfamily DB29_02947 43cb72022bc4f4c776a5948b808fe935 492 SUPERFAMILY SSF46689 436 484 1.43E-11 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DB29_02947 43cb72022bc4f4c776a5948b808fe935 492 Gene3D G3DSA:1.10.10.60 380 432 7.4E-12 T 14-10-2018 DB29_02947 43cb72022bc4f4c776a5948b808fe935 492 Gene3D G3DSA:1.10.10.60 433 487 6.4E-17 T 14-10-2018 DB29_02947 43cb72022bc4f4c776a5948b808fe935 492 SMART SM00448 2 115 0.0041 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DB29_02947 43cb72022bc4f4c776a5948b808fe935 492 SMART SM00342 400 483 1.2E-22 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DB29_02947 43cb72022bc4f4c776a5948b808fe935 492 Gene3D G3DSA:3.40.50.2300 1 134 7.8E-15 T 14-10-2018 DB29_02947 43cb72022bc4f4c776a5948b808fe935 492 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 437 479 - T 14-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 DB29_02947 43cb72022bc4f4c776a5948b808fe935 492 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 452 467 2.6E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DB29_02947 43cb72022bc4f4c776a5948b808fe935 492 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 467 483 2.6E-6 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DB29_02947 43cb72022bc4f4c776a5948b808fe935 492 Pfam PF00072 Response regulator receiver domain 4 115 8.7E-8 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DB29_02947 43cb72022bc4f4c776a5948b808fe935 492 Pfam PF12833 Helix-turn-helix domain 406 483 7.9E-18 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DB29_01293 7a8af394271ec7c8667bee10a73ffe8a 511 SUPERFAMILY SSF54862 2 485 2.72E-164 T 14-10-2018 DB29_01293 7a8af394271ec7c8667bee10a73ffe8a 511 TIGRFAM TIGR01660 narH: nitrate reductase, beta subunit 1 486 8.3E-258 T 14-10-2018 IPR006547 Nitrate reductase, beta subunit GO:0008940|GO:0009325|GO:0042126|GO:0055114 KEGG: 00910+1.7.5.1|MetaCyc: PWY-6748 DB29_01293 7a8af394271ec7c8667bee10a73ffe8a 511 Pfam PF14711 Respiratory nitrate reductase beta C-terminal 358 437 2.1E-26 T 14-10-2018 IPR029263 Respiratory nitrate reductase beta, C-terminal KEGG: 00910+1.7.5.1|MetaCyc: PWY-6748 DB29_01293 7a8af394271ec7c8667bee10a73ffe8a 511 Pfam PF13247 4Fe-4S dicluster domain 175 271 1.4E-36 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DB29_01293 7a8af394271ec7c8667bee10a73ffe8a 511 Gene3D G3DSA:3.30.70.20 1 303 1.8E-100 T 14-10-2018 DB29_01293 7a8af394271ec7c8667bee10a73ffe8a 511 Gene3D G3DSA:1.10.3650.10 358 436 1.9E-24 T 14-10-2018 IPR038262 Nitrate reductase beta, C-terminal domain superfamily KEGG: 00910+1.7.5.1|MetaCyc: PWY-6748 DB29_04159 c66808b03a5b71b911a334d6d6b32b79 141 SUPERFAMILY SSF55620 11 135 1.06E-31 T 14-10-2018 DB29_04159 c66808b03a5b71b911a334d6d6b32b79 141 PIRSF PIRSF006113 13 136 1.3E-19 T 14-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 DB29_04159 c66808b03a5b71b911a334d6d6b32b79 141 TIGRFAM TIGR03367 queuosine_QueD: queuosine biosynthesis protein QueD 16 106 1.5E-27 T 14-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 DB29_04159 c66808b03a5b71b911a334d6d6b32b79 141 Gene3D G3DSA:3.30.479.10 8 136 6.1E-27 T 14-10-2018 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily Reactome: R-HSA-1474151 DB29_04159 c66808b03a5b71b911a334d6d6b32b79 141 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 17 134 8.3E-28 T 14-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 DB29_00410 06a86755419371f1cf6be5ea74894434 510 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 83 424 1.9E-81 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain DB29_00410 06a86755419371f1cf6be5ea74894434 510 Gene3D G3DSA:3.40.190.10 198 491 9.7E-124 T 14-10-2018 DB29_00410 06a86755419371f1cf6be5ea74894434 510 Gene3D G3DSA:3.10.105.10 272 484 9.7E-124 T 14-10-2018 DB29_00410 06a86755419371f1cf6be5ea74894434 510 PIRSF PIRSF002741 1 510 1.9E-147 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 DB29_00410 06a86755419371f1cf6be5ea74894434 510 SUPERFAMILY SSF53850 37 493 1.66E-123 T 14-10-2018 DB29_00410 06a86755419371f1cf6be5ea74894434 510 Gene3D G3DSA:3.90.76.10 50 197 9.7E-124 T 14-10-2018 DB29_03825 306165779167cab2c0b6798d533eb567 99 Gene3D G3DSA:1.20.58.1000 1 99 4.3E-38 T 14-10-2018 IPR038390 Metal-sensitive transcriptional repressor superfamily DB29_03825 306165779167cab2c0b6798d533eb567 99 Pfam PF02583 Metal-sensitive transcriptional repressor 16 95 2.5E-33 T 14-10-2018 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 DB29_01426 741c53a61cca692c2b044069eec5c4b7 247 Gene3D G3DSA:3.40.50.300 1 231 8.4E-63 T 14-10-2018 DB29_01426 741c53a61cca692c2b044069eec5c4b7 247 SUPERFAMILY SSF52540 7 224 7.52E-65 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_01426 741c53a61cca692c2b044069eec5c4b7 247 ProSitePatterns PS00211 ABC transporters family signature. 122 136 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB29_01426 741c53a61cca692c2b044069eec5c4b7 247 SMART SM00382 31 199 1.0E-16 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_01426 741c53a61cca692c2b044069eec5c4b7 247 Pfam PF00005 ABC transporter 22 149 1.3E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB29_02088 0ecf14d86103e9607dfd0f6377715513 264 SUPERFAMILY SSF56281 3 240 1.83E-44 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DB29_02088 0ecf14d86103e9607dfd0f6377715513 264 Gene3D G3DSA:3.60.15.10 8 248 1.4E-43 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DB29_02088 0ecf14d86103e9607dfd0f6377715513 264 Pfam PF00753 Metallo-beta-lactamase superfamily 12 218 1.3E-25 T 14-10-2018 IPR001279 Metallo-beta-lactamase DB29_02088 0ecf14d86103e9607dfd0f6377715513 264 SMART SM00849 13 191 2.7E-14 T 14-10-2018 IPR001279 Metallo-beta-lactamase DB29_02857 cebf82abd759ba64aa6199ee063eed1e 301 Gene3D G3DSA:1.20.1260.130 2 300 1.1E-104 T 14-10-2018 DB29_02857 cebf82abd759ba64aa6199ee063eed1e 301 SUPERFAMILY SSF47240 2 295 1.34E-93 T 14-10-2018 IPR009078 Ferritin-like superfamily DB29_02857 cebf82abd759ba64aa6199ee063eed1e 301 Pfam PF05067 Manganese containing catalase 2 298 7.4E-78 T 14-10-2018 IPR007760 Manganese catalase DB29_03403 4a2aed662c286ccd4d89e096ef161376 311 SMART SM01131 181 307 4.6E-54 T 14-10-2018 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 DB29_03403 4a2aed662c286ccd4d89e096ef161376 311 Hamap MF_00207 Probable manganese-dependent inorganic pyrophosphatase [ppaC]. 3 309 46.443 T 14-10-2018 IPR022934 Manganese-dependent inorganic pyrophosphatase, probable GO:0004427 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 DB29_03403 4a2aed662c286ccd4d89e096ef161376 311 Pfam PF01368 DHH family 3 146 1.0E-30 T 14-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 DB29_03403 4a2aed662c286ccd4d89e096ef161376 311 Gene3D G3DSA:3.90.1640.10 1 188 8.3E-80 T 14-10-2018 DB29_03403 4a2aed662c286ccd4d89e096ef161376 311 SUPERFAMILY SSF64182 3 306 1.31E-82 T 14-10-2018 IPR038763 DHH phosphoesterase superfamily DB29_03403 4a2aed662c286ccd4d89e096ef161376 311 Pfam PF02833 DHHA2 domain 183 306 1.0E-19 T 14-10-2018 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 DB29_03403 4a2aed662c286ccd4d89e096ef161376 311 Gene3D G3DSA:3.10.310.20 190 309 2.0E-37 T 14-10-2018 IPR038222 DHHA2 domain superfamily KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 DB29_04021 359ff4c1b2eebacb48b3de6ff89f342f 120 SMART SM00448 3 115 5.1E-39 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DB29_04021 359ff4c1b2eebacb48b3de6ff89f342f 120 Gene3D G3DSA:3.40.50.2300 2 120 7.9E-39 T 14-10-2018 DB29_04021 359ff4c1b2eebacb48b3de6ff89f342f 120 Pfam PF00072 Response regulator receiver domain 5 115 3.2E-33 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DB29_04021 359ff4c1b2eebacb48b3de6ff89f342f 120 SUPERFAMILY SSF52172 3 120 1.99E-39 T 14-10-2018 IPR011006 CheY-like superfamily DB29_02037 9c3765253eed84b1d74cb312471e5b06 396 SUPERFAMILY SSF55920 157 388 1.31E-57 T 14-10-2018 IPR036005 Creatinase/aminopeptidase-like DB29_02037 9c3765253eed84b1d74cb312471e5b06 396 Gene3D G3DSA:3.90.230.10 156 388 2.2E-43 T 14-10-2018 DB29_02037 9c3765253eed84b1d74cb312471e5b06 396 SUPERFAMILY SSF53092 1 155 4.71E-41 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal DB29_02037 9c3765253eed84b1d74cb312471e5b06 396 Pfam PF00557 Metallopeptidase family M24 166 373 1.8E-31 T 14-10-2018 IPR000994 Peptidase M24 DB29_02037 9c3765253eed84b1d74cb312471e5b06 396 Gene3D G3DSA:3.40.350.10 1 155 1.0E-39 T 14-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal DB29_02037 9c3765253eed84b1d74cb312471e5b06 396 Pfam PF01321 Creatinase/Prolidase N-terminal domain 12 157 3.1E-23 T 14-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 DB29_01590 5eb241fae7164bda95a2a43679a5657d 445 Pfam PF07287 Acyclic terpene utilisation family protein AtuA 6 359 8.4E-120 T 14-10-2018 IPR010839 Acyclic terpene utilisation DB29_01605 dfe7d57d5bb0295afb043cc4794b673d 427 PIRSF PIRSF006066 1 427 1.4E-135 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 DB29_01605 dfe7d57d5bb0295afb043cc4794b673d 427 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 18 423 6.1E-127 T 14-10-2018 IPR004681 TRAP transporter large membrane protein DctM GO:0016021 DB29_01605 dfe7d57d5bb0295afb043cc4794b673d 427 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 7 418 2.6E-111 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit DB29_00966 9c5b29cf945501d2fd9fa9b02265cdbe 183 SUPERFAMILY SSF55729 6 175 3.54E-48 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase DB29_00966 9c5b29cf945501d2fd9fa9b02265cdbe 183 Pfam PF13302 Acetyltransferase (GNAT) domain 11 150 1.6E-26 T 14-10-2018 IPR000182 GNAT domain DB29_00966 9c5b29cf945501d2fd9fa9b02265cdbe 183 Gene3D G3DSA:3.40.630.30 2 174 1.8E-53 T 14-10-2018 DB29_01945 5fcaae9f2542174601d430fb9fe77cab 256 Hamap MF_01274 Type III pantothenate kinase [coaX]. 1 256 34.871 T 14-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 DB29_01945 5fcaae9f2542174601d430fb9fe77cab 256 SUPERFAMILY SSF53067 125 255 4.21E-33 T 14-10-2018 DB29_01945 5fcaae9f2542174601d430fb9fe77cab 256 Pfam PF03309 Type III pantothenate kinase 2 207 7.6E-68 T 14-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 DB29_01945 5fcaae9f2542174601d430fb9fe77cab 256 Gene3D G3DSA:3.30.420.40 90 256 2.4E-57 T 14-10-2018 DB29_01945 5fcaae9f2542174601d430fb9fe77cab 256 SUPERFAMILY SSF53067 1 123 8.29E-36 T 14-10-2018 DB29_01945 5fcaae9f2542174601d430fb9fe77cab 256 Gene3D G3DSA:3.30.420.40 1 89 9.0E-30 T 14-10-2018 DB29_01945 5fcaae9f2542174601d430fb9fe77cab 256 TIGRFAM TIGR00671 baf: pantothenate kinase, type III 2 251 3.5E-77 T 14-10-2018 IPR004619 Type III pantothenate kinase GO:0004594 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 DB29_04124 b2661620cea99ae1038fbb1ae4d6f2f6 154 Pfam PF11084 Protein of unknown function (DUF2621) 5 142 1.6E-71 T 14-10-2018 IPR020203 Uncharacterised protein family, YneK DB29_04124 b2661620cea99ae1038fbb1ae4d6f2f6 154 ProDom PD086666 YNEK BH2332 12 146 2.0E-64 T 14-10-2018 IPR020203 Uncharacterised protein family, YneK DB29_02500 fb6612ae70b407b6b92ee60fb9b094bb 247 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 DB29_02500 fb6612ae70b407b6b92ee60fb9b094bb 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 210 230 2.5E-44 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_02500 fb6612ae70b407b6b92ee60fb9b094bb 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 2.5E-44 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_02500 fb6612ae70b407b6b92ee60fb9b094bb 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 2.5E-44 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_02500 fb6612ae70b407b6b92ee60fb9b094bb 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 2.5E-44 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_02500 fb6612ae70b407b6b92ee60fb9b094bb 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 2.5E-44 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_02500 fb6612ae70b407b6b92ee60fb9b094bb 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 2.5E-44 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_02500 fb6612ae70b407b6b92ee60fb9b094bb 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 1.2E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_02500 fb6612ae70b407b6b92ee60fb9b094bb 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 1.2E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_02500 fb6612ae70b407b6b92ee60fb9b094bb 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 1.2E-11 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_02500 fb6612ae70b407b6b92ee60fb9b094bb 247 SUPERFAMILY SSF51735 6 246 1.16E-80 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_02500 fb6612ae70b407b6b92ee60fb9b094bb 247 Gene3D G3DSA:3.40.50.720 1 246 3.9E-84 T 14-10-2018 DB29_02500 fb6612ae70b407b6b92ee60fb9b094bb 247 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 245 1.2E-65 T 14-10-2018 DB29_01912 6390b4ec5bbb45c7e9b9fddb606bf9d7 120 Gene3D G3DSA:1.20.5.710 1 50 1.7E-22 T 14-10-2018 DB29_01912 6390b4ec5bbb45c7e9b9fddb606bf9d7 120 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 3 49 1.9E-22 T 14-10-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB29_01912 6390b4ec5bbb45c7e9b9fddb606bf9d7 120 TIGRFAM TIGR00855 L12: ribosomal protein bL12 2 120 2.9E-50 T 14-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB29_01912 6390b4ec5bbb45c7e9b9fddb606bf9d7 120 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 54 120 3.8E-32 T 14-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB29_01912 6390b4ec5bbb45c7e9b9fddb606bf9d7 120 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 2 120 25.852 T 14-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB29_01912 6390b4ec5bbb45c7e9b9fddb606bf9d7 120 SUPERFAMILY SSF54736 50 120 6.28E-26 T 14-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like DB29_01912 6390b4ec5bbb45c7e9b9fddb606bf9d7 120 SUPERFAMILY SSF48300 1 56 9.02E-17 T 14-10-2018 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB29_01912 6390b4ec5bbb45c7e9b9fddb606bf9d7 120 Gene3D G3DSA:3.30.1390.10 51 120 3.6E-32 T 14-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like DB29_01912 6390b4ec5bbb45c7e9b9fddb606bf9d7 120 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 55 94 6.0E-15 T 14-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB29_01023 86de02eda852b734974582f81f2fa141 305 Gene3D G3DSA:3.20.20.530 21 304 2.0E-94 T 14-10-2018 DB29_01023 86de02eda852b734974582f81f2fa141 305 PIRSF PIRSF000196 3 305 8.4E-133 T 14-10-2018 IPR008219 Proline dehydrogenase, bacteria and archaea GO:0004657|GO:0010133 KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922 DB29_01023 86de02eda852b734974582f81f2fa141 305 SUPERFAMILY SSF51730 39 303 3.37E-74 T 14-10-2018 IPR029041 FAD-linked oxidoreductase-like DB29_01023 86de02eda852b734974582f81f2fa141 305 Pfam PF01619 Proline dehydrogenase 48 295 5.5E-32 T 14-10-2018 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|Reactome: R-HSA-70688 DB29_02745 e9a2fa202ec726a80273a30178ef5a3f 280 SUPERFAMILY SSF161098 6 280 3.27E-69 T 14-10-2018 IPR035906 MetI-like superfamily DB29_02745 e9a2fa202ec726a80273a30178ef5a3f 280 Gene3D G3DSA:1.10.3720.10 2 267 9.3E-62 T 14-10-2018 IPR035906 MetI-like superfamily DB29_02745 e9a2fa202ec726a80273a30178ef5a3f 280 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 99 266 2.4E-20 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DB29_02445 501dafbaa07642dce477f3b57046502d 212 Gene3D G3DSA:3.50.30.100 2 196 5.6E-52 T 14-10-2018 DB29_02445 501dafbaa07642dce477f3b57046502d 212 SUPERFAMILY SSF89562 23 183 6.67E-43 T 14-10-2018 IPR036704 Ribonuclease E inhibitor RraA/RraA-like superfamily DB29_02445 501dafbaa07642dce477f3b57046502d 212 Pfam PF03737 Aldolase/RraA 28 174 3.8E-40 T 14-10-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein DB29_02074 7e8d639839007f0ffa205aa17e5aa34c 64 PIRSF PIRSF037263 2 64 4.9E-35 T 14-10-2018 IPR009296 Protein of unknown function DUF951 DB29_02074 7e8d639839007f0ffa205aa17e5aa34c 64 Pfam PF06107 Bacterial protein of unknown function (DUF951) 7 60 4.2E-31 T 14-10-2018 IPR009296 Protein of unknown function DUF951 DB29_03266 b5c2e7d22b03b7bcf70c58c7532b3aff 307 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 32 296 3.3E-54 T 14-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 DB29_03266 b5c2e7d22b03b7bcf70c58c7532b3aff 307 SUPERFAMILY SSF53850 31 300 9.15E-64 T 14-10-2018 DB29_03266 b5c2e7d22b03b7bcf70c58c7532b3aff 307 Gene3D G3DSA:3.40.190.120 136 239 9.8E-89 T 14-10-2018 DB29_03266 b5c2e7d22b03b7bcf70c58c7532b3aff 307 Gene3D G3DSA:3.40.190.10 35 295 9.8E-89 T 14-10-2018 DB29_01415 6d62473c1e0c55ab53258ef09427a0ae 358 Pfam PF01384 Phosphate transporter family 17 309 5.1E-47 T 14-10-2018 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 DB29_02814 e088c0f5b70ada9fbff836f5bb83e0f3 321 Gene3D G3DSA:3.40.50.200 1 312 4.7E-130 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 DB29_02814 e088c0f5b70ada9fbff836f5bb83e0f3 321 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 45 56 - T 14-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site DB29_02814 e088c0f5b70ada9fbff836f5bb83e0f3 321 Pfam PF00082 Subtilase family 40 291 1.5E-48 T 14-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 DB29_02814 e088c0f5b70ada9fbff836f5bb83e0f3 321 PRINTS PR00723 Subtilisin serine protease family (S8) signature 247 263 2.5E-22 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related DB29_02814 e088c0f5b70ada9fbff836f5bb83e0f3 321 PRINTS PR00723 Subtilisin serine protease family (S8) signature 40 59 2.5E-22 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related DB29_02814 e088c0f5b70ada9fbff836f5bb83e0f3 321 PRINTS PR00723 Subtilisin serine protease family (S8) signature 82 95 2.5E-22 T 14-10-2018 IPR015500 Peptidase S8, subtilisin-related DB29_02814 e088c0f5b70ada9fbff836f5bb83e0f3 321 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 86 96 - T 14-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site DB29_02814 e088c0f5b70ada9fbff836f5bb83e0f3 321 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 248 258 - T 14-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site DB29_02814 e088c0f5b70ada9fbff836f5bb83e0f3 321 SUPERFAMILY SSF52743 22 296 9.16E-81 T 14-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 DB29_00534 3b6c96acfa8ad39ea75b39f4d32299d5 388 Gene3D G3DSA:3.90.1150.10 26 381 1.4E-107 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DB29_00534 3b6c96acfa8ad39ea75b39f4d32299d5 388 SUPERFAMILY SSF53383 6 384 1.77E-97 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DB29_00534 3b6c96acfa8ad39ea75b39f4d32299d5 388 Gene3D G3DSA:3.40.640.10 44 284 1.4E-107 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DB29_00534 3b6c96acfa8ad39ea75b39f4d32299d5 388 Pfam PF00155 Aminotransferase class I and II 33 381 1.9E-60 T 14-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 DB29_03216 77060ee439d95ccfcb738b8ce0359186 528 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 471 521 1.9E-12 T 14-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain DB29_03216 77060ee439d95ccfcb738b8ce0359186 528 Pfam PF00460 Flagella basal body rod protein 8 37 1.2E-5 T 14-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 DB29_03216 77060ee439d95ccfcb738b8ce0359186 528 SUPERFAMILY SSF64518 174 523 1.44E-16 T 14-10-2018 DB29_03216 77060ee439d95ccfcb738b8ce0359186 528 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 7 521 3.3E-77 T 14-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 DB29_04047 108e19dd3d1223391a30676ada1daa08 91 Gene3D G3DSA:3.30.1230.10 1 91 3.2E-32 T 14-10-2018 IPR035931 YlxR-like superfamily DB29_04047 108e19dd3d1223391a30676ada1daa08 91 Pfam PF04296 Protein of unknown function (DUF448) 9 81 9.2E-27 T 14-10-2018 IPR007393 Domain of unknown function DUF448 DB29_04047 108e19dd3d1223391a30676ada1daa08 91 SUPERFAMILY SSF64376 4 85 4.97E-27 T 14-10-2018 IPR035931 YlxR-like superfamily DB29_04068 f3711ebc3fc70486a92f120359b719d7 780 SUPERFAMILY SSF52540 392 686 1.38E-47 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_04068 f3711ebc3fc70486a92f120359b719d7 780 Gene3D G3DSA:3.30.980.40 311 414 1.9E-38 T 14-10-2018 DB29_04068 f3711ebc3fc70486a92f120359b719d7 780 Gene3D G3DSA:3.40.50.300 416 700 3.4E-109 T 14-10-2018 DB29_04068 f3711ebc3fc70486a92f120359b719d7 780 Gene3D G3DSA:1.10.10.10 702 770 2.7E-27 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_04068 f3711ebc3fc70486a92f120359b719d7 780 SMART SM00843 709 774 4.6E-40 T 14-10-2018 IPR018541 FtsK gamma domain DB29_04068 f3711ebc3fc70486a92f120359b719d7 780 SUPERFAMILY SSF46785 709 775 8.57E-23 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_04068 f3711ebc3fc70486a92f120359b719d7 780 SMART SM00382 453 635 9.9E-4 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_04068 f3711ebc3fc70486a92f120359b719d7 780 Pfam PF09397 Ftsk gamma domain 711 771 4.1E-30 T 14-10-2018 IPR018541 FtsK gamma domain DB29_04068 f3711ebc3fc70486a92f120359b719d7 780 Pfam PF01580 FtsK/SpoIIIE family 419 614 2.9E-63 T 14-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 DB29_02086 99557ab307a996ec1a92dc8a2f619c0e 443 Gene3D G3DSA:3.30.310.160 225 370 2.2E-29 T 14-10-2018 DB29_02086 99557ab307a996ec1a92dc8a2f619c0e 443 Pfam PF07435 YycH protein 4 437 4.2E-67 T 14-10-2018 IPR009996 Regulatory protein YycH DB29_00139 6fdb578c9248034f151e60e5215a3f34 192 Pfam PF02517 CAAX protease self-immunity 101 181 1.1E-9 T 14-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 DB29_03557 0ee073876a3c19d3a505486d9ea2f833 275 Pfam PF04893 Yip1 domain 24 241 1.1E-13 T 14-10-2018 IPR006977 Yip1 domain GO:0016020 DB29_03851 fdfb48f9a92db9ff3568be3743a20989 325 SMART SM00861 4 179 1.5E-63 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain DB29_03851 fdfb48f9a92db9ff3568be3743a20989 325 Pfam PF02779 Transketolase, pyrimidine binding domain 5 178 9.2E-42 T 14-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain DB29_03851 fdfb48f9a92db9ff3568be3743a20989 325 Gene3D G3DSA:3.40.50.970 1 192 4.2E-81 T 14-10-2018 DB29_03851 fdfb48f9a92db9ff3568be3743a20989 325 SUPERFAMILY SSF52518 2 204 2.52E-66 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold DB29_03851 fdfb48f9a92db9ff3568be3743a20989 325 Pfam PF02780 Transketolase, C-terminal domain 194 315 5.1E-40 T 14-10-2018 IPR033248 Transketolase, C-terminal domain DB29_03851 fdfb48f9a92db9ff3568be3743a20989 325 SUPERFAMILY SSF52922 188 325 1.31E-43 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 DB29_03851 fdfb48f9a92db9ff3568be3743a20989 325 Gene3D G3DSA:3.40.50.920 193 325 5.8E-49 T 14-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 DB29_04326 582e6da7cde18feb6e76f1ed13822e52 334 ProDom PD106196 YISN IG BH1722 166 325 8.0E-91 T 14-10-2018 IPR024488 Protein of unknown function DUF2777 DB29_04326 582e6da7cde18feb6e76f1ed13822e52 334 Pfam PF10949 Protein of unknown function (DUF2777) 151 326 2.0E-37 T 14-10-2018 IPR024488 Protein of unknown function DUF2777 DB29_01340 caaa186b9e214c321f86a536f8534b30 270 SUPERFAMILY SSF52540 2 233 1.3E-50 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_01340 caaa186b9e214c321f86a536f8534b30 270 SMART SM00382 27 229 9.4E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_01340 caaa186b9e214c321f86a536f8534b30 270 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB29_01340 caaa186b9e214c321f86a536f8534b30 270 Pfam PF00005 ABC transporter 18 171 2.2E-26 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB29_01340 caaa186b9e214c321f86a536f8534b30 270 Gene3D G3DSA:3.40.50.300 1 244 8.1E-60 T 14-10-2018 DB29_04138 90b7b75e4be32f3b4b422ac7299955a4 303 Gene3D G3DSA:3.40.50.880 1 301 7.5E-127 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like DB29_04138 90b7b75e4be32f3b4b422ac7299955a4 303 Pfam PF04204 Homoserine O-succinyltransferase 2 299 1.9E-139 T 14-10-2018 IPR033752 MetA family DB29_04138 90b7b75e4be32f3b4b422ac7299955a4 303 SUPERFAMILY SSF52317 17 297 1.62E-103 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like DB29_04138 90b7b75e4be32f3b4b422ac7299955a4 303 TIGRFAM TIGR01001 metA: homoserine O-succinyltransferase 1 301 2.1E-133 T 14-10-2018 IPR005697 Homoserine O-succinyltransferase MetA GO:0005737|GO:0008899|GO:0019281 DB29_04138 90b7b75e4be32f3b4b422ac7299955a4 303 Hamap MF_00295 Homoserine O-succinyltransferase [metAS]. 31 299 43.272 T 14-10-2018 IPR033752 MetA family DB29_04138 90b7b75e4be32f3b4b422ac7299955a4 303 PIRSF PIRSF000450 1 303 1.2E-147 T 14-10-2018 IPR033752 MetA family DB29_04138 90b7b75e4be32f3b4b422ac7299955a4 303 ProDom PD037892 HOMOSERINE O-SUCCINYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIOSYNTHESIS TRANSSUCCINYLASE HTS METHIONINE O- AMINO-ACID 36 289 1.0E-150 T 14-10-2018 DB29_01256 7fbdc7e399510fac3b509e7346b17b57 209 PIRSF PIRSF001467 35 206 6.9E-39 T 14-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 DB29_01256 7fbdc7e399510fac3b509e7346b17b57 209 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 47 185 2.5E-48 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 DB29_01256 7fbdc7e399510fac3b509e7346b17b57 209 SUPERFAMILY SSF50891 46 186 1.33E-50 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily DB29_01256 7fbdc7e399510fac3b509e7346b17b57 209 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 147 159 1.8E-19 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 DB29_01256 7fbdc7e399510fac3b509e7346b17b57 209 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 87 99 1.8E-19 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 DB29_01256 7fbdc7e399510fac3b509e7346b17b57 209 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 160 175 1.8E-19 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 DB29_01256 7fbdc7e399510fac3b509e7346b17b57 209 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 61 76 1.8E-19 T 14-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 DB29_01256 7fbdc7e399510fac3b509e7346b17b57 209 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 82 99 - T 14-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 DB29_01256 7fbdc7e399510fac3b509e7346b17b57 209 Gene3D G3DSA:2.40.100.10 42 208 1.4E-55 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily DB29_04155 0821165e3fc746db282ec1a2519f8d10 91 Pfam PF00708 Acylphosphatase 5 88 3.0E-24 T 14-10-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 DB29_04155 0821165e3fc746db282ec1a2519f8d10 91 SUPERFAMILY SSF54975 1 88 1.79E-24 T 14-10-2018 IPR036046 Acylphosphatase-like domain superfamily KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 DB29_04155 0821165e3fc746db282ec1a2519f8d10 91 ProSitePatterns PS00150 Acylphosphatase signature 1. 9 19 - T 14-10-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 DB29_04155 0821165e3fc746db282ec1a2519f8d10 91 PRINTS PR00112 Acylphosphatase signature 4 19 3.5E-5 T 14-10-2018 IPR020456 Acylphosphatase GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 DB29_04155 0821165e3fc746db282ec1a2519f8d10 91 PRINTS PR00112 Acylphosphatase signature 25 50 3.5E-5 T 14-10-2018 IPR020456 Acylphosphatase GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 DB29_04155 0821165e3fc746db282ec1a2519f8d10 91 Gene3D G3DSA:3.30.70.100 1 90 1.7E-26 T 14-10-2018 DB29_01795 3e4074e801103f6847efe6727468c782 346 SUPERFAMILY SSF51905 1 187 3.31E-38 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB29_01795 3e4074e801103f6847efe6727468c782 346 Gene3D G3DSA:3.50.50.60 1 346 1.9E-91 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB29_01795 3e4074e801103f6847efe6727468c782 346 Pfam PF13738 Pyridine nucleotide-disulphide oxidoreductase 7 190 1.3E-29 T 14-10-2018 DB29_01795 3e4074e801103f6847efe6727468c782 346 SUPERFAMILY SSF51905 166 321 9.32E-7 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB29_01795 3e4074e801103f6847efe6727468c782 346 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 165 183 4.7E-9 T 14-10-2018 DB29_01795 3e4074e801103f6847efe6727468c782 346 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 4.7E-9 T 14-10-2018 DB29_01795 3e4074e801103f6847efe6727468c782 346 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 121 139 4.7E-9 T 14-10-2018 DB29_01795 3e4074e801103f6847efe6727468c782 346 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 5 27 1.1E-10 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DB29_01795 3e4074e801103f6847efe6727468c782 346 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 161 185 1.1E-10 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DB29_01795 3e4074e801103f6847efe6727468c782 346 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 122 130 1.1E-10 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DB29_00339 b2ef81b19391d1e05cf5fbb088e317e0 310 PRINTS PR00069 Aldo-keto reductase signature 109 127 7.2E-12 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DB29_00339 b2ef81b19391d1e05cf5fbb088e317e0 310 PRINTS PR00069 Aldo-keto reductase signature 44 68 7.2E-12 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DB29_00339 b2ef81b19391d1e05cf5fbb088e317e0 310 PRINTS PR00069 Aldo-keto reductase signature 140 157 7.2E-12 T 14-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 DB29_00339 b2ef81b19391d1e05cf5fbb088e317e0 310 Gene3D G3DSA:3.20.20.100 2 310 3.1E-122 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily DB29_00339 b2ef81b19391d1e05cf5fbb088e317e0 310 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 140 157 - T 14-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 DB29_00339 b2ef81b19391d1e05cf5fbb088e317e0 310 SUPERFAMILY SSF51430 1 309 4.58E-95 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily DB29_00339 b2ef81b19391d1e05cf5fbb088e317e0 310 Pfam PF00248 Aldo/keto reductase family 15 301 6.8E-74 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain DB29_03233 584d6613d6b865697bfd58706ad8f944 484 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 65 382 7.1E-107 T 14-10-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 DB29_03233 584d6613d6b865697bfd58706ad8f944 484 Gene3D G3DSA:1.10.101.10 385 463 1.8E-12 T 14-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 DB29_03233 584d6613d6b865697bfd58706ad8f944 484 Gene3D G3DSA:2.30.42.10 113 200 9.4E-86 T 14-10-2018 DB29_03233 584d6613d6b865697bfd58706ad8f944 484 Gene3D G3DSA:3.90.226.10 201 374 9.4E-86 T 14-10-2018 DB29_03233 584d6613d6b865697bfd58706ad8f944 484 Pfam PF03572 Peptidase family S41 214 375 1.0E-43 T 14-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 DB29_03233 584d6613d6b865697bfd58706ad8f944 484 SMART SM00228 113 184 1.6E-14 T 14-10-2018 IPR001478 PDZ domain GO:0005515 DB29_03233 584d6613d6b865697bfd58706ad8f944 484 SMART SM00245 186 377 9.5E-51 T 14-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 DB29_03233 584d6613d6b865697bfd58706ad8f944 484 Gene3D G3DSA:3.30.750.44 61 352 9.4E-86 T 14-10-2018 DB29_03233 584d6613d6b865697bfd58706ad8f944 484 SUPERFAMILY SSF50156 110 210 1.75E-21 T 14-10-2018 IPR036034 PDZ superfamily GO:0005515 DB29_03233 584d6613d6b865697bfd58706ad8f944 484 SUPERFAMILY SSF47090 395 456 6.59E-14 T 14-10-2018 IPR036365 PGBD-like superfamily DB29_03233 584d6613d6b865697bfd58706ad8f944 484 Pfam PF01471 Putative peptidoglycan binding domain 400 453 3.1E-13 T 14-10-2018 IPR002477 Peptidoglycan binding-like DB29_03233 584d6613d6b865697bfd58706ad8f944 484 Pfam PF13180 PDZ domain 114 193 2.2E-13 T 14-10-2018 IPR001478 PDZ domain GO:0005515 DB29_03233 584d6613d6b865697bfd58706ad8f944 484 SUPERFAMILY SSF52096 53 381 1.28E-62 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily DB29_03858 f0e0087133a86b92c3b9cd6abef1c2a2 303 SUPERFAMILY SSF161098 95 283 3.66E-27 T 14-10-2018 IPR035906 MetI-like superfamily DB29_03858 f0e0087133a86b92c3b9cd6abef1c2a2 303 Gene3D G3DSA:1.10.3720.10 91 300 1.4E-26 T 14-10-2018 IPR035906 MetI-like superfamily DB29_03858 f0e0087133a86b92c3b9cd6abef1c2a2 303 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 26 69 6.7E-13 T 14-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain DB29_03858 f0e0087133a86b92c3b9cd6abef1c2a2 303 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 118 302 6.4E-33 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DB29_00009 f4d9866c074f7648a19020a54925f929 304 SMART SM00382 28 209 1.1E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_00009 f4d9866c074f7648a19020a54925f929 304 Gene3D G3DSA:3.40.50.300 2 235 5.2E-65 T 14-10-2018 DB29_00009 f4d9866c074f7648a19020a54925f929 304 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB29_00009 f4d9866c074f7648a19020a54925f929 304 Pfam PF13732 Domain of unknown function (DUF4162) 214 302 1.2E-7 T 14-10-2018 IPR025302 Domain of unknown function DUF4162 DB29_00009 f4d9866c074f7648a19020a54925f929 304 Pfam PF00005 ABC transporter 19 161 2.5E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB29_00009 f4d9866c074f7648a19020a54925f929 304 SUPERFAMILY SSF52540 4 224 8.1E-61 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_02305 7f6e8159edf901eba409887e7448f0c0 158 Pfam PF04306 Protein of unknown function (DUF456) 21 156 4.5E-35 T 14-10-2018 IPR007403 Protein of unknown function DUF456 DB29_04070 0a570c001c45e3f9aba32b867486d966 425 SUPERFAMILY SSF63411 247 414 1.37E-29 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 DB29_04070 0a570c001c45e3f9aba32b867486d966 425 SUPERFAMILY SSF63411 12 231 6.52E-21 T 14-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 DB29_04070 0a570c001c45e3f9aba32b867486d966 425 Gene3D G3DSA:3.30.830.10 241 425 1.8E-43 T 14-10-2018 DB29_04070 0a570c001c45e3f9aba32b867486d966 425 Gene3D G3DSA:3.30.830.10 7 233 2.9E-58 T 14-10-2018 DB29_04070 0a570c001c45e3f9aba32b867486d966 425 Pfam PF05193 Peptidase M16 inactive domain 185 360 1.2E-22 T 14-10-2018 IPR007863 Peptidase M16, C-terminal DB29_01601 45a43150342832f02d72e0857de18c8a 291 PIRSF PIRSF001359 1 284 1.8E-99 T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 DB29_01601 45a43150342832f02d72e0857de18c8a 291 Pfam PF01116 Fructose-bisphosphate aldolase class-II 4 283 2.8E-97 T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 DB29_01601 45a43150342832f02d72e0857de18c8a 291 Gene3D G3DSA:3.20.20.70 1 284 1.9E-105 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DB29_01601 45a43150342832f02d72e0857de18c8a 291 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 284 2.2E-88 T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 DB29_01601 45a43150342832f02d72e0857de18c8a 291 SUPERFAMILY SSF51569 4 284 9.96E-96 T 14-10-2018 DB29_02568 381fd3fa1ca602321ebc66f7a0d497ae 340 PIRSF PIRSF002825 7 319 3.6E-55 T 14-10-2018 IPR026045 Ferric binding protein DB29_02568 381fd3fa1ca602321ebc66f7a0d497ae 340 Pfam PF13343 Bacterial extracellular solute-binding protein 91 294 7.6E-28 T 14-10-2018 DB29_02568 381fd3fa1ca602321ebc66f7a0d497ae 340 Gene3D G3DSA:3.40.190.10 33 303 1.2E-74 T 14-10-2018 DB29_02568 381fd3fa1ca602321ebc66f7a0d497ae 340 Gene3D G3DSA:3.40.190.10 129 316 1.2E-74 T 14-10-2018 DB29_02568 381fd3fa1ca602321ebc66f7a0d497ae 340 SUPERFAMILY SSF53850 27 328 3.85E-66 T 14-10-2018 DB29_00122 1096ed704e7740b610a9d1cc00e9585c 322 Gene3D G3DSA:3.50.50.60 130 247 3.6E-57 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB29_00122 1096ed704e7740b610a9d1cc00e9585c 322 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 269 291 1.4E-13 T 14-10-2018 DB29_00122 1096ed704e7740b610a9d1cc00e9585c 322 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 1.4E-13 T 14-10-2018 DB29_00122 1096ed704e7740b610a9d1cc00e9585c 322 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 157 175 1.4E-13 T 14-10-2018 DB29_00122 1096ed704e7740b610a9d1cc00e9585c 322 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 240 256 1.4E-13 T 14-10-2018 DB29_00122 1096ed704e7740b610a9d1cc00e9585c 322 Gene3D G3DSA:3.50.50.60 3 292 3.6E-57 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB29_00122 1096ed704e7740b610a9d1cc00e9585c 322 TIGRFAM TIGR04018 Bthiol_YpdA: putative bacillithiol system oxidoreductase, YpdA family 3 317 1.1E-143 T 14-10-2018 IPR023856 Bacillithiol biosynthesis thiol disulphide oxidoreductase, YpdA DB29_00122 1096ed704e7740b610a9d1cc00e9585c 322 Pfam PF13738 Pyridine nucleotide-disulphide oxidoreductase 5 288 7.7E-104 T 14-10-2018 DB29_00122 1096ed704e7740b610a9d1cc00e9585c 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 153 177 6.9E-20 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DB29_00122 1096ed704e7740b610a9d1cc00e9585c 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 3 25 6.9E-20 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DB29_00122 1096ed704e7740b610a9d1cc00e9585c 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 210 226 6.9E-20 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DB29_00122 1096ed704e7740b610a9d1cc00e9585c 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 279 297 6.9E-20 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DB29_00122 1096ed704e7740b610a9d1cc00e9585c 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 118 126 6.9E-20 T 14-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 DB29_00122 1096ed704e7740b610a9d1cc00e9585c 322 SUPERFAMILY SSF51905 2 318 4.19E-42 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB29_01758 b2ae3b583df77b23b355d2310300a035 328 ProDom PD024513 PERMEASE 2-KETO-3-DEOXYGLUCONATE MEMBRANE TRANSMEMBRANE SUGAR KDG SYMPORT INNER 2-KETO-3-DEOXY-D-GLUCONATE SYSTEM 14 317 3.0E-133 T 14-10-2018 IPR004684 2-keto-3-deoxygluconate permease GO:0008643|GO:0015649|GO:0016021|GO:0046411 DB29_01758 b2ae3b583df77b23b355d2310300a035 328 Pfam PF03812 2-keto-3-deoxygluconate permease 3 313 1.8E-109 T 14-10-2018 IPR004684 2-keto-3-deoxygluconate permease GO:0008643|GO:0015649|GO:0016021|GO:0046411 DB29_01940 f9c3138e86480e0e7a5322d5346d5d09 279 Gene3D G3DSA:3.30.470.10 1 121 1.1E-31 T 14-10-2018 DB29_01940 f9c3138e86480e0e7a5322d5346d5d09 279 ProSitePatterns PS00770 Aminotransferases class-IV signature. 176 205 - T 14-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 DB29_01940 f9c3138e86480e0e7a5322d5346d5d09 279 Pfam PF01063 Amino-transferase class IV 29 249 2.9E-48 T 14-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 DB29_01940 f9c3138e86480e0e7a5322d5346d5d09 279 Gene3D G3DSA:3.20.10.10 122 268 3.7E-44 T 14-10-2018 DB29_01940 f9c3138e86480e0e7a5322d5346d5d09 279 SUPERFAMILY SSF56752 5 264 2.49E-67 T 14-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 DB29_03951 1d08a3e03e0dcba11ab31dcae87de5ba 87 Pfam PF04025 Domain of unknown function (DUF370) 5 77 8.1E-38 T 14-10-2018 IPR007169 Extracellular matrix regulatory protein A DB29_03951 1d08a3e03e0dcba11ab31dcae87de5ba 87 ProDom PD063023 UPF0296 YLZA BA4010/GBAA4010/BAS3723 BLI01788/BL02292 BT9727_3613 BC3870 TM1690 CBDBA43 SYC0519_C BCE33L3631 5 77 2.0E-35 T 14-10-2018 IPR007169 Extracellular matrix regulatory protein A DB29_03951 1d08a3e03e0dcba11ab31dcae87de5ba 87 Hamap MF_01503 UPF0296 protein . 3 86 29.433 T 14-10-2018 IPR007169 Extracellular matrix regulatory protein A DB29_00208 23a42384a020c40e5cc0f6c9995fabea 462 Pfam PF07690 Major Facilitator Superfamily 21 411 3.3E-48 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DB29_00208 23a42384a020c40e5cc0f6c9995fabea 462 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 17 428 1.6E-112 T 14-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 DB29_00208 23a42384a020c40e5cc0f6c9995fabea 462 SUPERFAMILY SSF103473 8 458 6.02E-64 T 14-10-2018 IPR036259 MFS transporter superfamily DB29_00208 23a42384a020c40e5cc0f6c9995fabea 462 Gene3D G3DSA:1.20.1720.10 16 224 5.6E-39 T 14-10-2018 DB29_00208 23a42384a020c40e5cc0f6c9995fabea 462 Gene3D G3DSA:1.20.1250.20 262 461 8.5E-22 T 14-10-2018 DB29_00208 23a42384a020c40e5cc0f6c9995fabea 462 PRINTS PR01036 Tetracycline resistance protein TetB signature 19 43 2.0E-8 T 14-10-2018 DB29_00208 23a42384a020c40e5cc0f6c9995fabea 462 PRINTS PR01036 Tetracycline resistance protein TetB signature 110 130 2.0E-8 T 14-10-2018 DB29_00208 23a42384a020c40e5cc0f6c9995fabea 462 PRINTS PR01036 Tetracycline resistance protein TetB signature 140 164 2.0E-8 T 14-10-2018 DB29_00208 23a42384a020c40e5cc0f6c9995fabea 462 PRINTS PR01036 Tetracycline resistance protein TetB signature 304 328 2.0E-8 T 14-10-2018 DB29_00278 9497b52e793d48c38cacbff64ccaf7da 337 SUPERFAMILY SSF69572 4 326 3.27E-78 T 14-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 DB29_00278 9497b52e793d48c38cacbff64ccaf7da 337 Gene3D G3DSA:3.40.50.720 2 250 2.2E-76 T 14-10-2018 DB29_00278 9497b52e793d48c38cacbff64ccaf7da 337 Pfam PF00899 ThiF family 7 242 1.5E-60 T 14-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 DB29_02140 73165835938e67903484b2d956d03566 659 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 131 561 7.7E-92 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit DB29_02140 73165835938e67903484b2d956d03566 659 TIGRFAM TIGR02123 TRAP_fused: TRAP transporter, 4TM/12TM fusion protein 33 646 6.7E-205 T 14-10-2018 IPR011853 TRAP C4-dicarboxylate transport system permease, fused DctM-DctQ DB29_01492 7da7d47c1b73e70c50b22480f7c96e3d 509 Pfam PF00474 Sodium:solute symporter family 41 441 7.1E-45 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 DB29_01492 7da7d47c1b73e70c50b22480f7c96e3d 509 Gene3D G3DSA:1.20.1730.10 31 508 6.6E-73 T 14-10-2018 IPR038377 Sodium/glucose symporter superfamily DB29_01403 9c9eae89c0d6ca62d834865030c49fcb 496 Pfam PF01970 Tripartite tricarboxylate transporter TctA family 19 434 3.1E-111 T 14-10-2018 IPR002823 Protein of unknown function DUF112, transmembrane DB29_03929 f622af60d658ff405d11e7375181d8c2 253 SUPERFAMILY SSF55174 34 247 7.85E-32 T 14-10-2018 DB29_03929 f622af60d658ff405d11e7375181d8c2 253 Gene3D G3DSA:3.10.290.10 175 237 1.5E-11 T 14-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 DB29_03929 f622af60d658ff405d11e7375181d8c2 253 Pfam PF01479 S4 domain 178 222 1.6E-11 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB29_03929 f622af60d658ff405d11e7375181d8c2 253 Gene3D G3DSA:3.30.70.330 78 162 1.1E-24 T 14-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily DB29_03929 f622af60d658ff405d11e7375181d8c2 253 SMART SM00363 177 239 1.5E-13 T 14-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB29_03929 f622af60d658ff405d11e7375181d8c2 253 Gene3D G3DSA:3.30.1370.160 1 77 1.7E-20 T 14-10-2018 DB29_03285 5fab029210a2e89601531ab554ca543a 389 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 20 121 8.3E-12 T 14-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain DB29_03285 5fab029210a2e89601531ab554ca543a 389 Pfam PF13378 Enolase C-terminal domain-like 150 360 9.1E-28 T 14-10-2018 IPR029065 Enolase C-terminal domain-like DB29_03285 5fab029210a2e89601531ab554ca543a 389 SUPERFAMILY SSF51604 109 369 1.7E-46 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily DB29_03285 5fab029210a2e89601531ab554ca543a 389 SUPERFAMILY SSF54826 1 122 7.07E-18 T 14-10-2018 DB29_03285 5fab029210a2e89601531ab554ca543a 389 Gene3D G3DSA:3.30.390.10 21 363 3.7E-98 T 14-10-2018 IPR029017 Enolase-like, N-terminal DB29_03285 5fab029210a2e89601531ab554ca543a 389 Gene3D G3DSA:3.20.20.120 123 346 3.7E-98 T 14-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily DB29_04000 e75f35c05ec9173dbfeb87ab783e79dc 436 TIGRFAM TIGR00137 gid_trmFO: tRNA:m(5)U-54 methyltransferase 5 435 5.6E-229 T 14-10-2018 IPR004417 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO GO:0005737|GO:0008033|GO:0047151|GO:0050660 DB29_04000 e75f35c05ec9173dbfeb87ab783e79dc 436 SUPERFAMILY SSF51905 3 361 1.44E-25 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB29_04000 e75f35c05ec9173dbfeb87ab783e79dc 436 Hamap MF_01037 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO [trmFO]. 7 435 36.714 T 14-10-2018 IPR004417 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO GO:0005737|GO:0008033|GO:0047151|GO:0050660 DB29_04000 e75f35c05ec9173dbfeb87ab783e79dc 436 Gene3D G3DSA:3.50.50.60 4 179 1.1E-56 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB29_04000 e75f35c05ec9173dbfeb87ab783e79dc 436 Gene3D G3DSA:3.50.50.60 289 436 3.0E-53 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB29_04000 e75f35c05ec9173dbfeb87ab783e79dc 436 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 338 361 - T 14-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 DB29_04000 e75f35c05ec9173dbfeb87ab783e79dc 436 Pfam PF01134 Glucose inhibited division protein A 7 366 6.2E-115 T 14-10-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 DB29_03560 5694d5981911dfad2d5e3063723d2b30 397 Pfam PF02687 FtsX-like permease family 303 390 1.1E-14 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 DB29_03560 5694d5981911dfad2d5e3063723d2b30 397 Pfam PF12704 MacB-like periplasmic core domain 22 234 3.1E-28 T 14-10-2018 IPR025857 MacB-like periplasmic core domain DB29_01949 05fcb33a6f0edc04bb1b9205e77f0140 315 SMART SM00220 29 265 6.3E-7 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 DB29_01949 05fcb33a6f0edc04bb1b9205e77f0140 315 Pfam PF00069 Protein kinase domain 29 231 2.9E-13 T 14-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 DB29_01949 05fcb33a6f0edc04bb1b9205e77f0140 315 Gene3D G3DSA:1.10.510.10 110 251 9.5E-25 T 14-10-2018 DB29_01949 05fcb33a6f0edc04bb1b9205e77f0140 315 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 35 56 - T 14-10-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 DB29_01949 05fcb33a6f0edc04bb1b9205e77f0140 315 Gene3D G3DSA:3.30.200.20 23 109 9.5E-25 T 14-10-2018 DB29_01949 05fcb33a6f0edc04bb1b9205e77f0140 315 SUPERFAMILY SSF56112 18 235 2.56E-23 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily DB29_01417 a46675834fd8ec39882c34461c68beff 241 TIGRFAM TIGR00434 cysH: phosophoadenylyl-sulfate reductase 27 234 5.0E-90 T 14-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 DB29_01417 a46675834fd8ec39882c34461c68beff 241 Hamap MF_00063 Phosphoadenosine phosphosulfate reductase [cysH]. 1 235 41.255 T 14-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 DB29_01417 a46675834fd8ec39882c34461c68beff 241 TIGRFAM TIGR02055 APS_reductase: adenylylsulfate reductase, thioredoxin dependent 45 233 3.0E-72 T 14-10-2018 IPR011798 Adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019344|GO:0055114 KEGG: 00920+1.8.4.8 DB29_01417 a46675834fd8ec39882c34461c68beff 241 SUPERFAMILY SSF52402 12 198 2.58E-51 T 14-10-2018 DB29_01417 a46675834fd8ec39882c34461c68beff 241 PIRSF PIRSF000857 4 239 3.4E-92 T 14-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 DB29_01417 a46675834fd8ec39882c34461c68beff 241 Gene3D G3DSA:3.40.50.620 5 239 9.7E-76 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DB29_01417 a46675834fd8ec39882c34461c68beff 241 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 40 211 6.6E-51 T 14-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 DB29_01826 f62c45e0675fab15d096c4f45f10491b 187 Pfam PF08281 Sigma-70, region 4 128 180 3.2E-18 T 14-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DB29_01826 f62c45e0675fab15d096c4f45f10491b 187 Gene3D G3DSA:1.10.1740.10 3 118 7.8E-34 T 14-10-2018 DB29_01826 f62c45e0675fab15d096c4f45f10491b 187 SUPERFAMILY SSF88946 7 101 6.28E-31 T 14-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 DB29_01826 f62c45e0675fab15d096c4f45f10491b 187 Pfam PF04542 Sigma-70 region 2 23 89 8.2E-22 T 14-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 DB29_01826 f62c45e0675fab15d096c4f45f10491b 187 Gene3D G3DSA:1.10.10.10 120 187 1.3E-21 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_01826 f62c45e0675fab15d096c4f45f10491b 187 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 19 184 1.2E-33 T 14-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 DB29_01826 f62c45e0675fab15d096c4f45f10491b 187 SUPERFAMILY SSF88659 117 184 5.79E-18 T 14-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like DB29_01826 f62c45e0675fab15d096c4f45f10491b 187 TIGRFAM TIGR02948 SigW_bacill: RNA polymerase sigma-W factor 1 187 1.3E-96 T 14-10-2018 IPR014294 RNA polymerase sigma-W, bacillaceae DB29_01826 f62c45e0675fab15d096c4f45f10491b 187 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 45 76 - T 14-10-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 DB29_03074 6ba14dfdd3e9f90fa6b21f939036fb4a 273 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 83 263 2.2E-11 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DB29_03074 6ba14dfdd3e9f90fa6b21f939036fb4a 273 Gene3D G3DSA:1.10.3720.10 4 268 1.3E-57 T 14-10-2018 IPR035906 MetI-like superfamily DB29_03074 6ba14dfdd3e9f90fa6b21f939036fb4a 273 SUPERFAMILY SSF161098 3 265 1.44E-54 T 14-10-2018 IPR035906 MetI-like superfamily DB29_02914 48ad2c194736adfd54403a3c7b1df617 107 Gene3D G3DSA:1.10.287.1080 2 102 3.0E-22 T 14-10-2018 DB29_02914 48ad2c194736adfd54403a3c7b1df617 107 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 30 103 2.2E-13 T 14-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core DB29_02914 48ad2c194736adfd54403a3c7b1df617 107 PIRSF PIRSF036521 1 107 2.0E-50 T 14-10-2018 IPR011411 NTP Pyrophosphohydrolase MazG-related DB29_02914 48ad2c194736adfd54403a3c7b1df617 107 SUPERFAMILY SSF101386 3 103 1.01E-22 T 14-10-2018 DB29_02106 76bc7dc7c82b5101f07345e9fe893aea 159 Pfam PF03830 PTS system sorbose subfamily IIB component 3 150 1.9E-51 T 14-10-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 DB29_02106 76bc7dc7c82b5101f07345e9fe893aea 159 Gene3D G3DSA:3.40.35.10 1 159 1.4E-54 T 14-10-2018 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily GO:0005737|GO:0008982|GO:0009401 DB29_02106 76bc7dc7c82b5101f07345e9fe893aea 159 SUPERFAMILY SSF52728 1 158 1.44E-50 T 14-10-2018 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily GO:0005737|GO:0008982|GO:0009401 DB29_04364 5e248a68e1ac2dad215ef596dcb03e25 186 SUPERFAMILY SSF53335 18 184 9.97E-29 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DB29_04364 5e248a68e1ac2dad215ef596dcb03e25 186 Gene3D G3DSA:3.40.50.150 1 175 2.8E-35 T 14-10-2018 DB29_04364 5e248a68e1ac2dad215ef596dcb03e25 186 Pfam PF08241 Methyltransferase domain 36 132 8.6E-18 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 DB29_00086 37382d8a2cf370d8dba81a9afcbf5e6b 202 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 1 195 29.708 T 14-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 DB29_00086 37382d8a2cf370d8dba81a9afcbf5e6b 202 Gene3D G3DSA:3.20.20.70 1 188 1.3E-43 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DB29_00086 37382d8a2cf370d8dba81a9afcbf5e6b 202 SUPERFAMILY SSF51366 2 192 2.98E-38 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 DB29_00086 37382d8a2cf370d8dba81a9afcbf5e6b 202 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 5 190 6.2E-39 T 14-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 DB29_01665 fb81dd58da4338019679e8b4ed72b3dc 364 Pfam PF01757 Acyltransferase family 15 346 5.1E-31 T 14-10-2018 IPR002656 Acyltransferase 3 GO:0016747 DB29_02248 9eb816b6a36136734ce2fbeb55973e6c 155 Pfam PF00085 Thioredoxin 49 150 1.2E-12 T 14-10-2018 IPR013766 Thioredoxin domain GO:0045454 DB29_02248 9eb816b6a36136734ce2fbeb55973e6c 155 Gene3D G3DSA:3.40.30.10 42 150 7.2E-23 T 14-10-2018 DB29_02248 9eb816b6a36136734ce2fbeb55973e6c 155 SUPERFAMILY SSF52833 48 150 3.84E-22 T 14-10-2018 IPR036249 Thioredoxin-like superfamily DB29_02001 42c6e782b05db64c0f3a18241d18951e 243 Gene3D G3DSA:3.40.50.150 6 242 6.5E-59 T 14-10-2018 DB29_02001 42c6e782b05db64c0f3a18241d18951e 243 SUPERFAMILY SSF53335 13 194 4.96E-25 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DB29_02001 42c6e782b05db64c0f3a18241d18951e 243 Pfam PF05175 Methyltransferase small domain 40 145 7.5E-12 T 14-10-2018 IPR007848 Methyltransferase small domain GO:0008168 DB29_03213 bced0c0efbef59e0eaf506c7ac6fd2fe 141 TIGRFAM TIGR03826 YvyF: flagellar operon protein TIGR03826 2 137 1.4E-52 T 14-10-2018 IPR022258 Flagellar operon protein YvyF DB29_03421 0851524c6ac3888aa546bb0a45f75743 163 Pfam PF14183 YwpF-like protein 2 135 3.5E-45 T 14-10-2018 IPR025573 YwpF-like protein DB29_02845 58fb62ae686b0723e67e4d5196ca4902 335 Gene3D G3DSA:1.10.3470.10 10 334 5.4E-98 T 14-10-2018 IPR037294 ABC transporter, BtuC-like DB29_02845 58fb62ae686b0723e67e4d5196ca4902 335 SUPERFAMILY SSF81345 6 328 8.11E-82 T 14-10-2018 IPR037294 ABC transporter, BtuC-like DB29_02845 58fb62ae686b0723e67e4d5196ca4902 335 Pfam PF01032 FecCD transport family 24 328 3.9E-94 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 DB29_04316 6c91c92fbeb646b6bb0d556c146c40a8 174 SUPERFAMILY SSF52317 5 173 2.62E-45 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like DB29_04316 6c91c92fbeb646b6bb0d556c146c40a8 174 TIGRFAM TIGR01382 PfpI: intracellular protease, PfpI family 9 171 1.2E-44 T 14-10-2018 IPR006286 Deglycase PfpI DB29_04316 6c91c92fbeb646b6bb0d556c146c40a8 174 Pfam PF01965 DJ-1/PfpI family 6 167 1.8E-42 T 14-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 DB29_04316 6c91c92fbeb646b6bb0d556c146c40a8 174 Gene3D G3DSA:3.40.50.880 2 174 9.0E-48 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like DB29_01165 542b8492c3c977f2296f35fadca06fe2 117 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 9 113 2.2E-8 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain DB29_01165 542b8492c3c977f2296f35fadca06fe2 117 Gene3D G3DSA:3.10.180.10 3 116 1.3E-15 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DB29_01165 542b8492c3c977f2296f35fadca06fe2 117 SUPERFAMILY SSF54593 7 115 8.86E-18 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DB29_02599 5276cc4ca8fc575f88dc67527bb8a2b4 340 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 43 295 6.8E-63 T 14-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 DB29_02599 5276cc4ca8fc575f88dc67527bb8a2b4 340 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 40 320 2.2E-82 T 14-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 DB29_02599 5276cc4ca8fc575f88dc67527bb8a2b4 340 PIRSF PIRSF006470 3 338 1.1E-82 T 14-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 DB29_02599 5276cc4ca8fc575f88dc67527bb8a2b4 340 Gene3D G3DSA:3.40.190.170 32 338 1.4E-97 T 14-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily DB29_00956 4a134c0d515ae9ed35f8b0d33e0ef349 152 Pfam PF00586 AIR synthase related protein, N-terminal domain 59 138 5.9E-16 T 14-10-2018 IPR016188 PurM-like, N-terminal domain DB29_00956 4a134c0d515ae9ed35f8b0d33e0ef349 152 SUPERFAMILY SSF55326 4 137 5.08E-42 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily DB29_00956 4a134c0d515ae9ed35f8b0d33e0ef349 152 Gene3D G3DSA:3.30.1330.10 1 149 2.4E-55 T 14-10-2018 IPR036921 PurM-like, N-terminal domain superfamily DB29_02754 4ecdb436f5613a663ef5bb88d768d6b2 281 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 48 75 - T 14-10-2018 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 DB29_02754 4ecdb436f5613a663ef5bb88d768d6b2 281 Gene3D G3DSA:1.10.8.100 150 261 4.1E-59 T 14-10-2018 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201|Reactome: R-HSA-6793080 DB29_02754 4ecdb436f5613a663ef5bb88d768d6b2 281 SUPERFAMILY SSF53335 24 268 4.22E-46 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DB29_02754 4ecdb436f5613a663ef5bb88d768d6b2 281 Gene3D G3DSA:3.40.50.150 23 197 4.1E-59 T 14-10-2018 DB29_02754 4ecdb436f5613a663ef5bb88d768d6b2 281 Pfam PF00398 Ribosomal RNA adenine dimethylase 21 264 1.8E-51 T 14-10-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm DB29_02754 4ecdb436f5613a663ef5bb88d768d6b2 281 SMART SM00650 32 197 1.2E-56 T 14-10-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 DB29_00469 a8dfa0a653118f4d82bd74bb11f5845f 509 Gene3D G3DSA:3.10.350.10 2 65 1.0E-13 T 14-10-2018 IPR036779 LysM domain superfamily DB29_00469 a8dfa0a653118f4d82bd74bb11f5845f 509 SUPERFAMILY SSF54106 2 48 4.19E-10 T 14-10-2018 DB29_00469 a8dfa0a653118f4d82bd74bb11f5845f 509 TIGRFAM TIGR02899 spore_safA: spore coat assembly protein SafA 6 49 7.5E-22 T 14-10-2018 IPR014248 Spore coat assembly protein SafA DB29_00469 a8dfa0a653118f4d82bd74bb11f5845f 509 SMART SM00257 3 48 9.2E-13 T 14-10-2018 IPR018392 LysM domain DB29_00469 a8dfa0a653118f4d82bd74bb11f5845f 509 Pfam PF01476 LysM domain 4 48 3.5E-12 T 14-10-2018 IPR018392 LysM domain DB29_01400 9ad0d4d9ecd7cdb122b710f1b4b782e0 357 SUPERFAMILY SSF53659 5 353 5.58E-105 T 14-10-2018 DB29_01400 9ad0d4d9ecd7cdb122b710f1b4b782e0 357 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 7 349 2.7E-86 T 14-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 DB29_01400 9ad0d4d9ecd7cdb122b710f1b4b782e0 357 Gene3D G3DSA:3.40.718.10 5 357 2.3E-115 T 14-10-2018 DB29_01400 9ad0d4d9ecd7cdb122b710f1b4b782e0 357 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 239 258 - T 14-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 DB29_01400 9ad0d4d9ecd7cdb122b710f1b4b782e0 357 SMART SM01329 5 349 5.5E-146 T 14-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 DB29_02435 cb4c01d753b70cc5251ae5a66bc8fd69 253 Pfam PF03746 LamB/YcsF family 4 241 1.6E-102 T 14-10-2018 IPR005501 UPF0271 family, LamB/YcsF/PxpA KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 DB29_02435 cb4c01d753b70cc5251ae5a66bc8fd69 253 SUPERFAMILY SSF88713 4 249 6.74E-100 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 DB29_02435 cb4c01d753b70cc5251ae5a66bc8fd69 253 Gene3D G3DSA:3.20.20.370 2 252 1.7E-103 T 14-10-2018 DB29_02435 cb4c01d753b70cc5251ae5a66bc8fd69 253 Hamap MF_00691 UPF0271 protein YbgL [ybgL]. 2 246 46.277 T 14-10-2018 IPR005501 UPF0271 family, LamB/YcsF/PxpA KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 DB29_02137 a620e78f09eaeca669dff517d4b3128e 363 SUPERFAMILY SSF48256 2 360 3.4E-114 T 14-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 DB29_02137 a620e78f09eaeca669dff517d4b3128e 363 Pfam PF00285 Citrate synthase, C-terminal domain 6 354 8.6E-114 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 DB29_02137 a620e78f09eaeca669dff517d4b3128e 363 PIRSF PIRSF001369 1 363 6.5E-116 T 14-10-2018 IPR024176 Citrate synthase, bacterial-type DB29_02137 a620e78f09eaeca669dff517d4b3128e 363 Gene3D G3DSA:1.10.230.10 215 318 6.1E-117 T 14-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain DB29_02137 a620e78f09eaeca669dff517d4b3128e 363 ProSitePatterns PS00480 Citrate synthase signature. 250 262 - T 14-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 DB29_02137 a620e78f09eaeca669dff517d4b3128e 363 Gene3D G3DSA:1.10.580.10 17 344 6.1E-117 T 14-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 DB29_02137 a620e78f09eaeca669dff517d4b3128e 363 PRINTS PR00143 Citrate synthase signature 324 338 9.3E-32 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 DB29_02137 a620e78f09eaeca669dff517d4b3128e 363 PRINTS PR00143 Citrate synthase signature 189 217 9.3E-32 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 DB29_02137 a620e78f09eaeca669dff517d4b3128e 363 PRINTS PR00143 Citrate synthase signature 304 320 9.3E-32 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 DB29_02137 a620e78f09eaeca669dff517d4b3128e 363 PRINTS PR00143 Citrate synthase signature 167 182 9.3E-32 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 DB29_02137 a620e78f09eaeca669dff517d4b3128e 363 PRINTS PR00143 Citrate synthase signature 118 131 9.3E-32 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 DB29_02137 a620e78f09eaeca669dff517d4b3128e 363 PRINTS PR00143 Citrate synthase signature 243 263 9.3E-32 T 14-10-2018 IPR002020 Citrate synthase GO:0046912 DB29_04161 84e221c267e2fb472d112f8de64bbc0d 165 PIRSF PIRSF027377 7 147 8.1E-62 T 14-10-2018 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 DB29_04161 84e221c267e2fb472d112f8de64bbc0d 165 Hamap MF_00818 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 165 69.811 T 14-10-2018 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 DB29_04161 84e221c267e2fb472d112f8de64bbc0d 165 Pfam PF14489 QueF-like protein 62 140 1.5E-35 T 14-10-2018 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 DB29_04161 84e221c267e2fb472d112f8de64bbc0d 165 TIGRFAM TIGR03139 QueF-II: 7-cyano-7-deazaguanine reductase 28 139 2.9E-54 T 14-10-2018 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 DB29_04161 84e221c267e2fb472d112f8de64bbc0d 165 SUPERFAMILY SSF55620 29 133 1.7E-27 T 14-10-2018 DB29_04161 84e221c267e2fb472d112f8de64bbc0d 165 Gene3D G3DSA:3.30.1130.10 21 165 7.8E-65 T 14-10-2018 DB29_01053 a869c201734f75efa5b42a1f05f26f2c 337 Gene3D G3DSA:3.40.50.720 1 161 2.0E-13 T 14-10-2018 DB29_01053 a869c201734f75efa5b42a1f05f26f2c 337 SUPERFAMILY SSF51735 3 147 1.08E-11 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_01091 f915180939704213975e72a4013b1969 318 SUPERFAMILY SSF53448 1 250 1.92E-40 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DB29_01091 f915180939704213975e72a4013b1969 318 Pfam PF00535 Glycosyl transferase family 2 7 168 4.6E-37 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 DB29_01091 f915180939704213975e72a4013b1969 318 Gene3D G3DSA:3.90.550.10 1 193 1.7E-36 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DB29_01046 a3b86e441ae6e3d850ff0c4d8fdcb806 403 Pfam PF01420 Type I restriction modification DNA specificity domain 3 157 7.2E-16 T 14-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 DB29_01046 a3b86e441ae6e3d850ff0c4d8fdcb806 403 Pfam PF01420 Type I restriction modification DNA specificity domain 193 367 5.0E-9 T 14-10-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 DB29_01046 a3b86e441ae6e3d850ff0c4d8fdcb806 403 SUPERFAMILY SSF116734 177 397 8.67E-39 T 14-10-2018 DB29_01046 a3b86e441ae6e3d850ff0c4d8fdcb806 403 Gene3D G3DSA:3.90.220.20 1 124 6.4E-29 T 14-10-2018 DB29_01046 a3b86e441ae6e3d850ff0c4d8fdcb806 403 Gene3D G3DSA:3.90.220.20 178 392 3.9E-32 T 14-10-2018 DB29_01046 a3b86e441ae6e3d850ff0c4d8fdcb806 403 SUPERFAMILY SSF116734 2 179 5.89E-36 T 14-10-2018 DB29_04007 81fb3dfd49cb5d3d4d6662a79b4b9eab 98 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 1 98 17.632 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 DB29_04007 81fb3dfd49cb5d3d4d6662a79b4b9eab 98 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 16 98 2.9E-27 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 DB29_04007 81fb3dfd49cb5d3d4d6662a79b4b9eab 98 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 28 44 1.5E-15 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 DB29_04007 81fb3dfd49cb5d3d4d6662a79b4b9eab 98 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 62 78 1.5E-15 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 DB29_04007 81fb3dfd49cb5d3d4d6662a79b4b9eab 98 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 83 96 1.5E-15 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 DB29_04007 81fb3dfd49cb5d3d4d6662a79b4b9eab 98 Pfam PF02049 Flagellar hook-basal body complex protein FliE 15 98 1.4E-27 T 14-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 DB29_00623 ec7f9bc3334848da3867959400a92c80 224 Pfam PF14187 Domain of unknown function (DUF4310) 14 221 3.6E-109 T 14-10-2018 IPR025456 Protein of unknown function DUF4310 DB29_00623 ec7f9bc3334848da3867959400a92c80 224 TIGRFAM TIGR03579 EF_0833: conserved hypothetical protein EF_0833/AHA_3914 15 223 2.9E-119 T 14-10-2018 IPR025456 Protein of unknown function DUF4310 DB29_02763 9e978c8cc1edd7f08cc92a43cb37ec0c 117 Gene3D G3DSA:3.10.180.10 4 117 1.3E-18 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DB29_02763 9e978c8cc1edd7f08cc92a43cb37ec0c 117 SUPERFAMILY SSF54593 6 117 5.5E-23 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DB29_02763 9e978c8cc1edd7f08cc92a43cb37ec0c 117 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 7 114 3.2E-8 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain DB29_00889 5775d0fb5d97eac964af4b3b2052a8f6 254 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 251 9.7E-53 T 14-10-2018 DB29_00889 5775d0fb5d97eac964af4b3b2052a8f6 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 133 149 1.6E-31 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_00889 5775d0fb5d97eac964af4b3b2052a8f6 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 1.6E-31 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_00889 5775d0fb5d97eac964af4b3b2052a8f6 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 1.6E-31 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_00889 5775d0fb5d97eac964af4b3b2052a8f6 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 88 99 1.6E-31 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_00889 5775d0fb5d97eac964af4b3b2052a8f6 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 1.6E-31 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_00889 5775d0fb5d97eac964af4b3b2052a8f6 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 1.6E-31 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_00889 5775d0fb5d97eac964af4b3b2052a8f6 254 Gene3D G3DSA:3.40.50.720 3 254 2.9E-70 T 14-10-2018 DB29_00889 5775d0fb5d97eac964af4b3b2052a8f6 254 SUPERFAMILY SSF51735 5 253 2.92E-70 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_00889 5775d0fb5d97eac964af4b3b2052a8f6 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 139 147 1.3E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_00889 5775d0fb5d97eac964af4b3b2052a8f6 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 159 178 1.3E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_00889 5775d0fb5d97eac964af4b3b2052a8f6 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 88 99 1.3E-8 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_00202 30392017af40a4f7d7dfa9bfcd7cd98f 114 Gene3D G3DSA:3.30.750.24 2 114 1.5E-31 T 14-10-2018 IPR036513 STAS domain superfamily DB29_00202 30392017af40a4f7d7dfa9bfcd7cd98f 114 TIGRFAM TIGR00377 ant_ant_sig: anti-anti-sigma factor 2 103 6.9E-35 T 14-10-2018 IPR003658 Anti-sigma factor antagonist GO:0006355|GO:0045152 DB29_00202 30392017af40a4f7d7dfa9bfcd7cd98f 114 TIGRFAM TIGR02886 spore_II_AA: anti-sigma F factor antagonist 7 108 9.2E-43 T 14-10-2018 IPR014237 Anti-sigma F factor antagonist GO:0006355|GO:0030435|GO:0045152 DB29_00202 30392017af40a4f7d7dfa9bfcd7cd98f 114 Pfam PF01740 STAS domain 7 104 1.7E-22 T 14-10-2018 IPR002645 STAS domain DB29_00202 30392017af40a4f7d7dfa9bfcd7cd98f 114 SUPERFAMILY SSF52091 3 109 4.71E-28 T 14-10-2018 IPR036513 STAS domain superfamily DB29_01748 73bd7881c6b4de544018a4821cf6f98b 308 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 125 300 3.8E-23 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DB29_01748 73bd7881c6b4de544018a4821cf6f98b 308 SUPERFAMILY SSF161098 36 308 4.84E-80 T 14-10-2018 IPR035906 MetI-like superfamily DB29_01748 73bd7881c6b4de544018a4821cf6f98b 308 Gene3D G3DSA:1.10.3720.10 31 295 3.4E-74 T 14-10-2018 IPR035906 MetI-like superfamily DB29_00065 a6b461b52e38fe856d28f17f954c113c 409 Pfam PF01139 tRNA-splicing ligase RtcB 31 397 1.1E-69 T 14-10-2018 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 Reactome: R-HSA-6784531 DB29_00065 a6b461b52e38fe856d28f17f954c113c 409 SUPERFAMILY SSF103365 16 398 5.49E-99 T 14-10-2018 IPR036025 tRNA-splicing ligase RtcB-like superfamily GO:0006396|GO:0008452 Reactome: R-HSA-6784531 DB29_00065 a6b461b52e38fe856d28f17f954c113c 409 Gene3D G3DSA:3.90.1860.10 8 398 7.8E-84 T 14-10-2018 IPR036025 tRNA-splicing ligase RtcB-like superfamily GO:0006396|GO:0008452 Reactome: R-HSA-6784531 DB29_01647 4e69368081b346726a7e83f177407452 235 Gene3D G3DSA:3.40.225.10 1 228 6.5E-62 T 14-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily DB29_01647 4e69368081b346726a7e83f177407452 235 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 8 194 2.5E-47 T 14-10-2018 IPR001303 Class II aldolase/adducin N-terminal DB29_01647 4e69368081b346726a7e83f177407452 235 SUPERFAMILY SSF53639 2 220 6.08E-69 T 14-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily DB29_01647 4e69368081b346726a7e83f177407452 235 SMART SM01007 7 195 2.4E-68 T 14-10-2018 IPR001303 Class II aldolase/adducin N-terminal DB29_04368 50863bd13e3201d4ac146b695ee1af68 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 1.5E-30 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_04368 50863bd13e3201d4ac146b695ee1af68 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 1.5E-30 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_04368 50863bd13e3201d4ac146b695ee1af68 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 211 231 1.5E-30 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_04368 50863bd13e3201d4ac146b695ee1af68 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 1.5E-30 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_04368 50863bd13e3201d4ac146b695ee1af68 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 1.5E-30 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_04368 50863bd13e3201d4ac146b695ee1af68 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 1.5E-30 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_04368 50863bd13e3201d4ac146b695ee1af68 263 SUPERFAMILY SSF51735 5 249 3.1E-76 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_04368 50863bd13e3201d4ac146b695ee1af68 263 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 248 5.6E-56 T 14-10-2018 DB29_04368 50863bd13e3201d4ac146b695ee1af68 263 Gene3D G3DSA:3.40.50.720 1 258 1.8E-75 T 14-10-2018 DB29_02105 1d5670337b93356e4ea2cdb395052c0e 202 Pfam PF03609 PTS system sorbose-specific iic component 2 188 6.0E-62 T 14-10-2018 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit GO:0009401|GO:0016021 DB29_03622 473e90b5ecf98caf0694b5cb4d2621a1 271 Pfam PF01578 Cytochrome C assembly protein 66 261 1.0E-19 T 14-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 DB29_02673 307422c664b1a6f72bbce204d9671713 292 SUPERFAMILY SSF161098 18 292 1.31E-63 T 14-10-2018 IPR035906 MetI-like superfamily DB29_02673 307422c664b1a6f72bbce204d9671713 292 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 100 286 2.1E-19 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DB29_02673 307422c664b1a6f72bbce204d9671713 292 Gene3D G3DSA:1.10.3720.10 13 283 2.3E-54 T 14-10-2018 IPR035906 MetI-like superfamily DB29_00928 2bd1cbfa3fc307bf388df172c6c697a3 278 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 108 269 1.2E-24 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DB29_00928 2bd1cbfa3fc307bf388df172c6c697a3 278 SUPERFAMILY SSF161098 85 269 8.37E-41 T 14-10-2018 IPR035906 MetI-like superfamily DB29_00928 2bd1cbfa3fc307bf388df172c6c697a3 278 Gene3D G3DSA:1.10.3720.10 82 275 1.0E-37 T 14-10-2018 IPR035906 MetI-like superfamily DB29_01001 d7745edb7baee68a731adec5fcadc1a5 556 Gene3D G3DSA:1.50.10.10 222 364 1.1E-6 T 14-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 DB29_01001 d7745edb7baee68a731adec5fcadc1a5 556 SUPERFAMILY SSF48208 209 413 6.29E-18 T 14-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 DB29_01152 0fba621aeeeeb03f292f617adfc796ad 131 Gene3D G3DSA:3.30.1330.40 4 130 5.2E-22 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 DB29_01152 0fba621aeeeeb03f292f617adfc796ad 131 Pfam PF01042 Endoribonuclease L-PSP 14 129 4.4E-17 T 14-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 DB29_01152 0fba621aeeeeb03f292f617adfc796ad 131 SUPERFAMILY SSF55298 2 129 2.36E-27 T 14-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 DB29_04116 ab44b3b420cca682a5086188abc5751a 220 SMART SM00857 10 156 8.3E-35 T 14-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 DB29_04116 ab44b3b420cca682a5086188abc5751a 220 Pfam PF00239 Resolvase, N terminal domain 10 154 1.7E-25 T 14-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 DB29_04116 ab44b3b420cca682a5086188abc5751a 220 Gene3D G3DSA:3.40.50.1390 5 161 2.5E-28 T 14-10-2018 DB29_04116 ab44b3b420cca682a5086188abc5751a 220 SUPERFAMILY SSF53041 10 156 8.5E-27 T 14-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 DB29_02238 14f60b2cb595938d366b38ef9a5b923b 400 Gene3D G3DSA:3.40.50.150 182 399 2.7E-60 T 14-10-2018 DB29_02238 14f60b2cb595938d366b38ef9a5b923b 400 Gene3D G3DSA:2.30.130.10 5 73 1.0E-16 T 14-10-2018 IPR036974 PUA domain superfamily GO:0003723 DB29_02238 14f60b2cb595938d366b38ef9a5b923b 400 SUPERFAMILY SSF88697 7 74 6.21E-16 T 14-10-2018 IPR015947 PUA-like superfamily DB29_02238 14f60b2cb595938d366b38ef9a5b923b 400 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 113 347 1.2E-26 T 14-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 DB29_02238 14f60b2cb595938d366b38ef9a5b923b 400 SUPERFAMILY SSF53335 81 393 2.69E-59 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DB29_02238 14f60b2cb595938d366b38ef9a5b923b 400 Gene3D G3DSA:3.30.750.80 74 180 4.6E-33 T 14-10-2018 DB29_03638 6bebeba683304ef97bdcb429b6d0ac4d 230 TIGRFAM TIGR00608 radc: DNA repair protein RadC 13 225 3.5E-77 T 14-10-2018 IPR001405 Uncharacterised protein family UPF0758 DB29_03638 6bebeba683304ef97bdcb429b6d0ac4d 230 Gene3D G3DSA:3.40.140.10 102 226 1.9E-47 T 14-10-2018 DB29_03638 6bebeba683304ef97bdcb429b6d0ac4d 230 Pfam PF04002 RadC-like JAB domain 105 224 7.4E-47 T 14-10-2018 IPR025657 RadC-like JAB domain DB29_03638 6bebeba683304ef97bdcb429b6d0ac4d 230 SUPERFAMILY SSF47781 17 93 9.53E-8 T 14-10-2018 IPR010994 RuvA domain 2-like DB29_03638 6bebeba683304ef97bdcb429b6d0ac4d 230 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 175 180 - T 14-10-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site DB29_01632 ab65b9dda35e8f059061f6555f95fac2 104 SUPERFAMILY SSF103481 4 100 1.26E-16 T 14-10-2018 DB29_01632 ab65b9dda35e8f059061f6555f95fac2 104 Gene3D G3DSA:1.10.3730.20 1 104 9.1E-21 T 14-10-2018 DB29_01632 ab65b9dda35e8f059061f6555f95fac2 104 Pfam PF00893 Small Multidrug Resistance protein 1 93 5.4E-23 T 14-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 DB29_02719 3de2f9adf1a9f4eac436323529f6fdf6 312 Pfam PF13407 Periplasmic binding protein domain 47 298 2.9E-65 T 14-10-2018 IPR025997 Periplasmic binding protein DB29_02719 3de2f9adf1a9f4eac436323529f6fdf6 312 Gene3D G3DSA:3.40.50.2300 145 279 1.1E-88 T 14-10-2018 DB29_02719 3de2f9adf1a9f4eac436323529f6fdf6 312 Gene3D G3DSA:3.40.50.2300 51 298 1.1E-88 T 14-10-2018 DB29_02719 3de2f9adf1a9f4eac436323529f6fdf6 312 SUPERFAMILY SSF53822 42 310 3.47E-85 T 14-10-2018 IPR028082 Periplasmic binding protein-like I DB29_01741 ea48d19c8a30f797a714e7b58b37345a 107 SUPERFAMILY SSF54292 9 90 2.0E-19 T 14-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 DB29_01741 ea48d19c8a30f797a714e7b58b37345a 107 Gene3D G3DSA:3.10.20.30 4 99 6.0E-18 T 14-10-2018 IPR012675 Beta-grasp domain superfamily DB29_01741 ea48d19c8a30f797a714e7b58b37345a 107 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 9 82 1.0E-13 T 14-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 DB29_02783 7376ab4cda8088a08fa0930a7276a15e 280 SUPERFAMILY SSF56601 59 261 1.47E-30 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like DB29_02783 7376ab4cda8088a08fa0930a7276a15e 280 Pfam PF00905 Penicillin binding protein transpeptidase domain 79 259 9.2E-28 T 14-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 DB29_02783 7376ab4cda8088a08fa0930a7276a15e 280 Gene3D G3DSA:3.40.710.10 47 278 9.9E-88 T 14-10-2018 DB29_02554 7cac5deb52100819ad4db2d77b643fdf 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.5E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DB29_02554 7cac5deb52100819ad4db2d77b643fdf 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.5E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DB29_02554 7cac5deb52100819ad4db2d77b643fdf 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.5E-7 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DB29_02554 7cac5deb52100819ad4db2d77b643fdf 291 Pfam PF03466 LysR substrate binding domain 88 284 2.2E-32 T 14-10-2018 IPR005119 LysR, substrate-binding DB29_02554 7cac5deb52100819ad4db2d77b643fdf 291 Gene3D G3DSA:3.40.190.290 82 282 2.9E-75 T 14-10-2018 DB29_02554 7cac5deb52100819ad4db2d77b643fdf 291 SUPERFAMILY SSF53850 88 287 5.34E-31 T 14-10-2018 DB29_02554 7cac5deb52100819ad4db2d77b643fdf 291 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 1.6E-15 T 14-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 DB29_02554 7cac5deb52100819ad4db2d77b643fdf 291 Gene3D G3DSA:1.10.10.10 1 81 2.6E-19 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_02554 7cac5deb52100819ad4db2d77b643fdf 291 SUPERFAMILY SSF46785 1 111 1.03E-20 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_00226 b3d6d41c6790bc1b461294ed55c8518c 103 SUPERFAMILY SSF46767 3 84 9.55E-21 T 14-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 DB29_00226 b3d6d41c6790bc1b461294ed55c8518c 103 Gene3D G3DSA:1.10.10.10 1 102 3.3E-30 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_00226 b3d6d41c6790bc1b461294ed55c8518c 103 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 4 81 2.5E-22 T 14-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 DB29_00226 b3d6d41c6790bc1b461294ed55c8518c 103 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 5 80 8.2E-15 T 14-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 DB29_03849 d46ce13f85640acf3d80a91e3954e28a 217 Pfam PF10368 Putative cell-wall binding lipoprotein 13 212 1.9E-64 T 14-10-2018 IPR019454 Putative cell-wall binding lipoprotein YkyA-like DB29_03849 d46ce13f85640acf3d80a91e3954e28a 217 Gene3D G3DSA:1.20.120.570 13 208 8.8E-39 T 14-10-2018 IPR036785 YkyA-like superfamily DB29_03849 d46ce13f85640acf3d80a91e3954e28a 217 SUPERFAMILY SSF140423 19 209 5.36E-48 T 14-10-2018 IPR036785 YkyA-like superfamily DB29_03466 3d7d2c08b124d3e220f58db38d239a0c 242 Gene3D G3DSA:3.40.50.720 1 242 6.0E-79 T 14-10-2018 DB29_03466 3d7d2c08b124d3e220f58db38d239a0c 242 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 75 86 2.5E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_03466 3d7d2c08b124d3e220f58db38d239a0c 242 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 149 168 2.5E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_03466 3d7d2c08b124d3e220f58db38d239a0c 242 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 129 137 2.5E-12 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_03466 3d7d2c08b124d3e220f58db38d239a0c 242 SUPERFAMILY SSF51735 2 236 7.42E-78 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_03466 3d7d2c08b124d3e220f58db38d239a0c 242 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 136 164 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 DB29_03466 3d7d2c08b124d3e220f58db38d239a0c 242 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 4 184 0.0019 T 14-10-2018 DB29_03466 3d7d2c08b124d3e220f58db38d239a0c 242 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 10 235 3.1E-66 T 14-10-2018 DB29_03466 3d7d2c08b124d3e220f58db38d239a0c 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 123 139 2.1E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_03466 3d7d2c08b124d3e220f58db38d239a0c 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 198 218 2.1E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_03466 3d7d2c08b124d3e220f58db38d239a0c 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 2.1E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_03466 3d7d2c08b124d3e220f58db38d239a0c 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 75 86 2.1E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_03466 3d7d2c08b124d3e220f58db38d239a0c 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 149 168 2.1E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_03466 3d7d2c08b124d3e220f58db38d239a0c 242 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 170 187 2.1E-38 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_03364 358854f89375bcd2d7b8d4f375061c31 104 Gene3D G3DSA:3.40.30.30 1 104 2.8E-37 T 14-10-2018 IPR038218 YuzD-like superfamily DB29_03364 358854f89375bcd2d7b8d4f375061c31 104 Pfam PF07315 Protein of unknown function (DUF1462) 8 100 1.4E-40 T 14-10-2018 IPR009190 Protein of unknown function DUF1462 DB29_03364 358854f89375bcd2d7b8d4f375061c31 104 PIRSF PIRSF010603 1 104 5.7E-40 T 14-10-2018 IPR009190 Protein of unknown function DUF1462 DB29_03364 358854f89375bcd2d7b8d4f375061c31 104 SUPERFAMILY SSF52833 2 102 1.03E-40 T 14-10-2018 IPR036249 Thioredoxin-like superfamily DB29_02351 f451c3b62f5fee24b21b8606732d3324 63 TIGRFAM TIGR02327 int_mem_ywzB: conserved hypothetical integral membrane protein 2 63 9.7E-14 T 14-10-2018 IPR009526 Protein of unknown function DUF1146 DB29_02351 f451c3b62f5fee24b21b8606732d3324 63 Pfam PF06612 Protein of unknown function (DUF1146) 3 50 2.9E-19 T 14-10-2018 IPR009526 Protein of unknown function DUF1146 DB29_02134 07462861ce973513b6cb4f64d77bc644 336 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 38 287 6.5E-64 T 14-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 DB29_02134 07462861ce973513b6cb4f64d77bc644 336 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 37 313 5.1E-73 T 14-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 DB29_02134 07462861ce973513b6cb4f64d77bc644 336 Gene3D G3DSA:3.40.190.170 31 329 4.7E-83 T 14-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily DB29_02134 07462861ce973513b6cb4f64d77bc644 336 PIRSF PIRSF006470 2 332 6.0E-69 T 14-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 DB29_03308 501b9c8b70157b9894c3d1ba1313816a 787 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 207 304 1.7E-12 T 14-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 DB29_03308 501b9c8b70157b9894c3d1ba1313816a 787 SUPERFAMILY SSF52096 474 784 4.54E-39 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily DB29_03308 501b9c8b70157b9894c3d1ba1313816a 787 Gene3D G3DSA:1.10.1040.10 208 344 2.8E-19 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 DB29_03308 501b9c8b70157b9894c3d1ba1313816a 787 Gene3D G3DSA:3.40.50.720 1 207 2.6E-61 T 14-10-2018 DB29_03308 501b9c8b70157b9894c3d1ba1313816a 787 SUPERFAMILY SSF51735 4 205 1.83E-41 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_03308 501b9c8b70157b9894c3d1ba1313816a 787 SUPERFAMILY SSF48179 356 444 4.17E-15 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 DB29_03308 501b9c8b70157b9894c3d1ba1313816a 787 SUPERFAMILY SSF48179 205 324 2.04E-22 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 DB29_03308 501b9c8b70157b9894c3d1ba1313816a 787 Gene3D G3DSA:1.10.1040.10 364 444 2.6E-5 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 DB29_03308 501b9c8b70157b9894c3d1ba1313816a 787 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 7 204 2.6E-44 T 14-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 DB29_03308 501b9c8b70157b9894c3d1ba1313816a 787 Pfam PF00378 Enoyl-CoA hydratase/isomerase 482 617 5.4E-12 T 14-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 DB29_03308 501b9c8b70157b9894c3d1ba1313816a 787 Gene3D G3DSA:3.90.226.10 477 671 1.2E-29 T 14-10-2018 DB29_00880 fb359c5f76a2623117af86228ba0d486 235 Gene3D G3DSA:1.10.3470.10 4 159 9.3E-7 T 14-10-2018 IPR037294 ABC transporter, BtuC-like DB29_00880 fb359c5f76a2623117af86228ba0d486 235 SUPERFAMILY SSF81345 1 220 5.62E-28 T 14-10-2018 IPR037294 ABC transporter, BtuC-like DB29_00880 fb359c5f76a2623117af86228ba0d486 235 Pfam PF00950 ABC 3 transport family 1 223 2.2E-59 T 14-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 DB29_01697 97a2dd7f162b636c3626397129377eac 390 Pfam PF07690 Major Facilitator Superfamily 23 245 3.7E-22 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DB29_01697 97a2dd7f162b636c3626397129377eac 390 SUPERFAMILY SSF103473 17 386 1.44E-42 T 14-10-2018 IPR036259 MFS transporter superfamily DB29_01697 97a2dd7f162b636c3626397129377eac 390 Gene3D G3DSA:1.20.1250.20 15 388 1.2E-36 T 14-10-2018 DB29_03073 24b9b16cd06fb6e2050a3e5e846451c2 263 Gene3D G3DSA:1.10.3720.10 6 261 1.9E-46 T 14-10-2018 IPR035906 MetI-like superfamily DB29_03073 24b9b16cd06fb6e2050a3e5e846451c2 263 SUPERFAMILY SSF161098 7 255 5.98E-49 T 14-10-2018 IPR035906 MetI-like superfamily DB29_03073 24b9b16cd06fb6e2050a3e5e846451c2 263 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 78 251 1.0E-10 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DB29_02767 49b05cda11b2cef724a7a6af115d6799 409 Gene3D G3DSA:3.40.190.10 144 370 2.2E-83 T 14-10-2018 DB29_02767 49b05cda11b2cef724a7a6af115d6799 409 Pfam PF13416 Bacterial extracellular solute-binding protein 47 350 1.8E-35 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein DB29_02767 49b05cda11b2cef724a7a6af115d6799 409 SUPERFAMILY SSF53850 18 405 2.08E-58 T 14-10-2018 DB29_02767 49b05cda11b2cef724a7a6af115d6799 409 Gene3D G3DSA:3.40.190.10 44 352 2.2E-83 T 14-10-2018 DB29_02183 270b37f377716a3de0285b5ac273082a 378 SUPERFAMILY SSF103473 5 365 4.32E-32 T 14-10-2018 IPR036259 MFS transporter superfamily DB29_02183 270b37f377716a3de0285b5ac273082a 378 Pfam PF07690 Major Facilitator Superfamily 9 323 1.2E-17 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DB29_02183 270b37f377716a3de0285b5ac273082a 378 Gene3D G3DSA:1.20.1250.20 1 363 6.8E-28 T 14-10-2018 DB29_02631 9a1368d30813110baf2ed5f33bebb85d 641 TIGRFAM TIGR03986 TIGR03986: CRISPR-associated protein 15 527 2.5E-81 T 14-10-2018 IPR023825 CRISPR-associated RAMP BGP1436 DB29_02631 9a1368d30813110baf2ed5f33bebb85d 641 Pfam PF03787 RAMP superfamily 49 515 7.9E-25 T 14-10-2018 IPR005537 CRISPR type III-associated RAMP protein DB29_03458 4e1c39d58320f077867c3b4e3de64dcf 234 Pfam PF04172 LrgB-like family 15 224 7.7E-63 T 14-10-2018 IPR007300 CidB/LrgB family DB29_01446 c50ba21da447766b24b1f9a557b3b8c4 217 Pfam PF07302 AroM protein 4 216 4.6E-77 T 14-10-2018 IPR010843 Uncharacterised protein family AroM DB29_01446 c50ba21da447766b24b1f9a557b3b8c4 217 ProDom PD037589 AROM ARO OPERON REGULATED BY AROR BIOSYNTHESIS TRANSCRIPTION AMINO AROMATIC 3 203 1.0E-114 T 14-10-2018 IPR010843 Uncharacterised protein family AroM DB29_03371 bf59faf5b519809223332dbe4e5822ee 117 SUPERFAMILY SSF89360 1 95 1.83E-29 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 DB29_03371 bf59faf5b519809223332dbe4e5822ee 117 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 88 105 - T 14-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 DB29_03371 bf59faf5b519809223332dbe4e5822ee 117 Pfam PF01521 Iron-sulphur cluster biosynthesis 2 102 3.5E-22 T 14-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 DB29_03371 bf59faf5b519809223332dbe4e5822ee 117 Gene3D G3DSA:2.60.300.12 1 109 4.5E-35 T 14-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 DB29_03371 bf59faf5b519809223332dbe4e5822ee 117 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 2 106 1.5E-37 T 14-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 DB29_02890 b67a5dac346006a14132aa72b70286a8 303 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 92 103 6.9E-14 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_02890 b67a5dac346006a14132aa72b70286a8 303 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 6.9E-14 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_02890 b67a5dac346006a14132aa72b70286a8 303 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 194 211 6.9E-14 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_02890 b67a5dac346006a14132aa72b70286a8 303 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 144 160 6.9E-14 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_02890 b67a5dac346006a14132aa72b70286a8 303 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 192 6.9E-14 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_02890 b67a5dac346006a14132aa72b70286a8 303 Pfam PF00106 short chain dehydrogenase 7 211 4.6E-19 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_02890 b67a5dac346006a14132aa72b70286a8 303 SUPERFAMILY SSF51735 2 263 9.92E-39 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_02890 b67a5dac346006a14132aa72b70286a8 303 Gene3D G3DSA:3.40.50.720 3 271 3.5E-41 T 14-10-2018 DB29_00187 2ee41886d3d807d3c63fec6947ea2b7f 477 Gene3D G3DSA:3.30.1330.120 283 421 1.1E-188 T 14-10-2018 DB29_00187 2ee41886d3d807d3c63fec6947ea2b7f 477 TIGRFAM TIGR02330 prpD: 2-methylcitrate dehydratase 11 477 3.6E-254 T 14-10-2018 IPR012705 2-methylcitrate dehydratase PrpD GO:0019629|GO:0047547|GO:0051537 KEGG: 00640+4.2.1.79 DB29_00187 2ee41886d3d807d3c63fec6947ea2b7f 477 Gene3D G3DSA:1.10.4100.10 20 456 1.1E-188 T 14-10-2018 DB29_00187 2ee41886d3d807d3c63fec6947ea2b7f 477 SUPERFAMILY SSF103378 11 475 1.96E-151 T 14-10-2018 IPR036148 MmgE/PrpD superfamily GO:0016829 DB29_00187 2ee41886d3d807d3c63fec6947ea2b7f 477 Pfam PF03972 MmgE/PrpD family 15 461 8.6E-148 T 14-10-2018 IPR005656 MmgE/PrpD GO:0016829 DB29_02271 1db36da73df3bcd5269945771898da00 205 Pfam PF00583 Acetyltransferase (GNAT) family 15 136 6.4E-11 T 14-10-2018 IPR000182 GNAT domain DB29_02271 1db36da73df3bcd5269945771898da00 205 SUPERFAMILY SSF55729 4 140 4.63E-19 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase DB29_02271 1db36da73df3bcd5269945771898da00 205 Gene3D G3DSA:3.40.630.30 2 205 6.8E-50 T 14-10-2018 DB29_00568 955674468df0b028787c152bc21cd75a 184 SUPERFAMILY SSF56037 25 178 1.62E-20 T 14-10-2018 DB29_03335 7ff611c8090a6b8b6522e170a1cc28b9 284 SUPERFAMILY SSF56112 11 260 2.73E-48 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily DB29_03335 7ff611c8090a6b8b6522e170a1cc28b9 284 Gene3D G3DSA:3.90.1200.10 99 278 3.7E-25 T 14-10-2018 DB29_03335 7ff611c8090a6b8b6522e170a1cc28b9 284 Gene3D G3DSA:3.30.200.20 5 94 1.9E-11 T 14-10-2018 DB29_03335 7ff611c8090a6b8b6522e170a1cc28b9 284 Pfam PF01636 Phosphotransferase enzyme family 29 237 2.5E-27 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase DB29_00058 5d340d70421c30256fcb6a5697c059b6 62 Gene3D G3DSA:1.20.120.450 1 51 1.8E-10 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes DB29_00058 5d340d70421c30256fcb6a5697c059b6 62 Pfam PF08020 Protein of unknown function (DUF1706) 1 45 5.1E-11 T 14-10-2018 IPR012550 Protein of unknown function DUF1706 DB29_01366 76d2988002376f34587f90b7cbe57021 251 Pfam PF08220 DeoR-like helix-turn-helix domain 9 59 1.4E-15 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DB29_01366 76d2988002376f34587f90b7cbe57021 251 Pfam PF00455 DeoR C terminal sensor domain 77 232 2.9E-50 T 14-10-2018 IPR014036 DeoR C-terminal sensor domain DB29_01366 76d2988002376f34587f90b7cbe57021 251 SMART SM01134 73 233 2.6E-68 T 14-10-2018 DB29_01366 76d2988002376f34587f90b7cbe57021 251 SUPERFAMILY SSF46785 4 75 3.43E-13 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_01366 76d2988002376f34587f90b7cbe57021 251 SMART SM00420 6 58 2.7E-15 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DB29_01366 76d2988002376f34587f90b7cbe57021 251 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 14-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 DB29_01366 76d2988002376f34587f90b7cbe57021 251 Gene3D G3DSA:1.10.10.10 1 60 3.5E-6 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_01366 76d2988002376f34587f90b7cbe57021 251 SUPERFAMILY SSF100950 77 233 1.83E-34 T 14-10-2018 IPR037171 NagB/RpiA transferase-like DB29_01366 76d2988002376f34587f90b7cbe57021 251 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 4.6E-9 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DB29_01366 76d2988002376f34587f90b7cbe57021 251 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 4.6E-9 T 14-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 DB29_01703 483b83f9f00668050208275f826c5961 1236 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 802 1037 2.5E-28 T 14-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 DB29_01703 483b83f9f00668050208275f826c5961 1236 SUPERFAMILY SSF51695 629 787 3.14E-13 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 DB29_01703 483b83f9f00668050208275f826c5961 1236 SUPERFAMILY SSF74853 382 518 9.68E-9 T 14-10-2018 IPR036415 Lamin tail domain superfamily DB29_01703 483b83f9f00668050208275f826c5961 1236 Gene3D G3DSA:3.20.20.190 620 783 4.4E-9 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 DB29_01703 483b83f9f00668050208275f826c5961 1236 Pfam PF00932 Lamin Tail Domain 382 517 4.5E-15 T 14-10-2018 IPR001322 Lamin tail domain DB29_01703 483b83f9f00668050208275f826c5961 1236 Pfam PF00932 Lamin Tail Domain 190 329 2.2E-18 T 14-10-2018 IPR001322 Lamin tail domain DB29_01703 483b83f9f00668050208275f826c5961 1236 SUPERFAMILY SSF74853 177 284 1.31E-6 T 14-10-2018 IPR036415 Lamin tail domain superfamily DB29_01703 483b83f9f00668050208275f826c5961 1236 SUPERFAMILY SSF51695 796 1039 3.14E-58 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 DB29_01703 483b83f9f00668050208275f826c5961 1236 Gene3D G3DSA:3.20.20.190 784 1046 4.8E-61 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 DB29_03142 5694e7436ff3d50aa67d7269a45b9849 166 SUPERFAMILY SSF109854 2 149 5.86E-31 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes DB29_03142 5694e7436ff3d50aa67d7269a45b9849 166 Gene3D G3DSA:1.20.120.450 1 164 1.0E-41 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes DB29_03142 5694e7436ff3d50aa67d7269a45b9849 166 Pfam PF05163 DinB family 2 162 1.2E-27 T 14-10-2018 IPR007837 DNA damage-inducible protein DinB DB29_01174 57d0ee8a64f19ff86c9ff908629d7569 66 PIRSF PIRSF002599 1 66 2.1E-24 T 14-10-2018 IPR012156 Cold shock, CspA GO:0003676 DB29_01174 57d0ee8a64f19ff86c9ff908629d7569 66 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 33 - T 14-10-2018 IPR019844 Cold-shock conserved site DB29_01174 57d0ee8a64f19ff86c9ff908629d7569 66 PRINTS PR00050 Cold shock protein signature 4 19 1.7E-19 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 DB29_01174 57d0ee8a64f19ff86c9ff908629d7569 66 PRINTS PR00050 Cold shock protein signature 24 33 1.7E-19 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 DB29_01174 57d0ee8a64f19ff86c9ff908629d7569 66 PRINTS PR00050 Cold shock protein signature 39 57 1.7E-19 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 DB29_01174 57d0ee8a64f19ff86c9ff908629d7569 66 Pfam PF00313 'Cold-shock' DNA-binding domain 3 65 1.1E-31 T 14-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 DB29_01174 57d0ee8a64f19ff86c9ff908629d7569 66 SMART SM00357 3 66 2.7E-31 T 14-10-2018 IPR011129 Cold shock domain GO:0003676 DB29_01174 57d0ee8a64f19ff86c9ff908629d7569 66 SUPERFAMILY SSF50249 1 64 5.36E-25 T 14-10-2018 IPR012340 Nucleic acid-binding, OB-fold DB29_01174 57d0ee8a64f19ff86c9ff908629d7569 66 Gene3D G3DSA:2.40.50.140 1 66 2.2E-30 T 14-10-2018 DB29_02647 6a31bb2679c27ee22c5e593eb71f464e 177 Pfam PF13787 Protein of unknown function with HXXEE motif 16 135 3.0E-19 T 14-10-2018 IPR025671 Protein of unknown function with HXXEE motif DB29_00233 b1a3df45f5661fe888a7b463d1b562b7 259 Pfam PF00520 Ion transport protein 12 230 8.6E-45 T 14-10-2018 IPR005821 Ion transport domain GO:0005216|GO:0006811|GO:0016020|GO:0055085 DB29_00233 b1a3df45f5661fe888a7b463d1b562b7 259 Gene3D G3DSA:1.20.120.350 4 116 2.0E-26 T 14-10-2018 IPR027359 Voltage-dependent channel domain superfamily DB29_00233 b1a3df45f5661fe888a7b463d1b562b7 259 Gene3D G3DSA:1.10.287.70 117 219 5.3E-35 T 14-10-2018 DB29_00233 b1a3df45f5661fe888a7b463d1b562b7 259 SUPERFAMILY SSF81324 12 227 2.75E-31 T 14-10-2018 DB29_00554 496baf8dc1791626c29dcec9b4e00ad8 390 TIGRFAM TIGR02877 spore_yhbH: sporulation protein YhbH 9 381 3.7E-181 T 14-10-2018 IPR014230 Sporulation protein YhbH DB29_00554 496baf8dc1791626c29dcec9b4e00ad8 390 SUPERFAMILY SSF53300 216 338 5.11E-5 T 14-10-2018 IPR036465 von Willebrand factor A-like domain superfamily DB29_00554 496baf8dc1791626c29dcec9b4e00ad8 390 Hamap MF_01232 UPF0229 protein YeaH [yeaH]. 7 386 32.082 T 14-10-2018 IPR006698 Uncharacterised protein family UPF0229 DB29_00554 496baf8dc1791626c29dcec9b4e00ad8 390 Pfam PF04285 Protein of unknown function (DUF444) 186 383 1.3E-69 T 14-10-2018 IPR006698 Uncharacterised protein family UPF0229 DB29_00554 496baf8dc1791626c29dcec9b4e00ad8 390 Pfam PF04285 Protein of unknown function (DUF444) 11 184 2.2E-33 T 14-10-2018 IPR006698 Uncharacterised protein family UPF0229 DB29_01115 d994e9086ab797d5bd56a050f7788e77 93 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 5 76 4.3E-16 T 14-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 DB29_01115 d994e9086ab797d5bd56a050f7788e77 93 SUPERFAMILY SSF52794 2 88 4.19E-21 T 14-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 DB29_01115 d994e9086ab797d5bd56a050f7788e77 93 Gene3D G3DSA:3.40.50.2300 4 92 2.7E-21 T 14-10-2018 DB29_00033 e64f97c7756550153eb140ddcc809214 561 Gene3D G3DSA:1.10.510.40 344 557 2.3E-50 T 14-10-2018 DB29_00033 e64f97c7756550153eb140ddcc809214 561 Pfam PF04183 IucA / IucC family 111 353 4.8E-71 T 14-10-2018 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal GO:0019290 DB29_00033 e64f97c7756550153eb140ddcc809214 561 Pfam PF06276 Ferric iron reductase FhuF-like transporter 374 538 6.2E-28 T 14-10-2018 IPR022770 Ferric iron reductase FhuF domain DB29_02266 313bcb4804cf1907bd6ed4ed4ac2c26f 304 Pfam PF10335 Putative nucleotidyltransferase substrate binding domain 164 296 2.4E-27 T 14-10-2018 IPR018821 Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding DB29_02266 313bcb4804cf1907bd6ed4ed4ac2c26f 304 Pfam PF03445 Putative nucleotidyltransferase DUF294 8 126 8.0E-36 T 14-10-2018 IPR005105 Protein-PII uridylyltransferase, N-terminal GO:0008773 DB29_02769 f12f8991105abde57f7bec718b2f8717 639 Pfam PF02687 FtsX-like permease family 85 179 6.8E-7 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 DB29_02769 f12f8991105abde57f7bec718b2f8717 639 PIRSF PIRSF018968 1 639 1.5E-250 T 14-10-2018 IPR027022 ABC transporter permease protein, BceB-type GO:0055085 DB29_01334 2006f4be5976cb738d7b6f8e0d47f411 79 PIRSF PIRSF037793 1 79 9.7E-33 T 14-10-2018 IPR014921 EsaB DB29_01334 2006f4be5976cb738d7b6f8e0d47f411 79 Gene3D G3DSA:3.10.20.90 1 79 2.6E-36 T 14-10-2018 DB29_01334 2006f4be5976cb738d7b6f8e0d47f411 79 Pfam PF08817 WXG100 protein secretion system (Wss), protein YukD 3 78 3.5E-12 T 14-10-2018 IPR024962 YukD-like DB29_01730 baebe31e8abfaa5874f653206da7422e 164 TIGRFAM TIGR02406 ectoine_EctA: diaminobutyrate acetyltransferase 10 162 1.8E-61 T 14-10-2018 IPR012772 L-2,4-diaminobutyric acid acetyltransferase GO:0019491|GO:0033816 KEGG: 00260+2.3.1.178 DB29_01730 baebe31e8abfaa5874f653206da7422e 164 Gene3D G3DSA:3.40.630.30 7 164 1.7E-51 T 14-10-2018 DB29_01730 baebe31e8abfaa5874f653206da7422e 164 SUPERFAMILY SSF55729 3 127 2.74E-20 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase DB29_01730 baebe31e8abfaa5874f653206da7422e 164 Pfam PF00583 Acetyltransferase (GNAT) family 23 127 2.1E-14 T 14-10-2018 IPR000182 GNAT domain DB29_01160 5bebf2bc2a025fca68689b88256af293 132 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 13 131 9.0E-22 T 14-10-2018 IPR013538 Activator of Hsp90 ATPase homologue 1-like DB29_01160 5bebf2bc2a025fca68689b88256af293 132 SUPERFAMILY SSF55961 5 132 6.87E-33 T 14-10-2018 DB29_01160 5bebf2bc2a025fca68689b88256af293 132 Gene3D G3DSA:3.30.530.20 2 132 3.7E-29 T 14-10-2018 IPR023393 START-like domain superfamily DB29_02852 a512233e004c7d622a8f4081ba9f0eee 255 Gene3D G3DSA:2.40.260.10 26 253 6.9E-74 T 14-10-2018 IPR023365 Sortase domain superfamily DB29_02852 a512233e004c7d622a8f4081ba9f0eee 255 PIRSF PIRSF030150 1 251 1.0E-107 T 14-10-2018 IPR015986 Sortase B, Firmicutes DB29_02852 a512233e004c7d622a8f4081ba9f0eee 255 SUPERFAMILY SSF63817 13 252 1.96E-87 T 14-10-2018 IPR023365 Sortase domain superfamily DB29_02852 a512233e004c7d622a8f4081ba9f0eee 255 TIGRFAM TIGR03064 sortase_srtB: sortase, SrtB family 2 245 5.8E-102 T 14-10-2018 IPR009835 Sortase B family DB29_02852 a512233e004c7d622a8f4081ba9f0eee 255 Pfam PF04203 Sortase family 86 249 3.7E-20 T 14-10-2018 IPR005754 Sortase family DB29_02328 6462825bd4b67ac37a237c902e31976a 149 Gene3D G3DSA:3.40.630.30 4 137 5.7E-9 T 14-10-2018 DB29_02328 6462825bd4b67ac37a237c902e31976a 149 SUPERFAMILY SSF55729 1 116 4.25E-5 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase DB29_03317 8bd45bc39d99e14daf463cc4d742f412 181 ProDom PD007457 TRANSFERASE ADENOSYLTRANSFERASE COBALAMIN ATP:COBIALAMIN ADENOSYLTRANSFERASE PDUO TYPE RELATED ACIDURIA YVQK 70 164 1.0E-49 T 14-10-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 DB29_03317 8bd45bc39d99e14daf463cc4d742f412 181 SUPERFAMILY SSF89028 6 167 1.84E-33 T 14-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 DB29_03317 8bd45bc39d99e14daf463cc4d742f412 181 Gene3D G3DSA:1.20.1200.10 22 180 5.9E-20 T 14-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 DB29_03317 8bd45bc39d99e14daf463cc4d742f412 181 Pfam PF01923 Cobalamin adenosyltransferase 29 154 5.6E-11 T 14-10-2018 IPR016030 Cobalamin adenosyltransferase-like KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 DB29_03221 c413c03024114b56bd477a9573909d3e 580 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 310 567 9.3E-57 T 14-10-2018 IPR010809 Flagellar hook-associated protein 2, C-terminal GO:0007155|GO:0009288 DB29_03221 c413c03024114b56bd477a9573909d3e 580 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 9 106 1.9E-23 T 14-10-2018 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 DB29_00785 47c38d6017e0215fb4448fb08c1caa90 155 SUPERFAMILY SSF109854 2 150 1.27E-30 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes DB29_00785 47c38d6017e0215fb4448fb08c1caa90 155 Pfam PF12867 DinB superfamily 7 143 3.5E-16 T 14-10-2018 IPR024775 DinB-like domain DB29_00785 47c38d6017e0215fb4448fb08c1caa90 155 Gene3D G3DSA:1.20.120.450 1 154 3.0E-25 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes DB29_00672 867abe7427a6279c8e92dbc3037a3a78 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 148 167 1.9E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_00672 867abe7427a6279c8e92dbc3037a3a78 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 76 87 1.9E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_00672 867abe7427a6279c8e92dbc3037a3a78 249 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 129 137 1.9E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_00672 867abe7427a6279c8e92dbc3037a3a78 249 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 135 163 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 DB29_00672 867abe7427a6279c8e92dbc3037a3a78 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 76 87 4.5E-43 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_00672 867abe7427a6279c8e92dbc3037a3a78 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 208 228 4.5E-43 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_00672 867abe7427a6279c8e92dbc3037a3a78 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 148 167 4.5E-43 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_00672 867abe7427a6279c8e92dbc3037a3a78 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 4.5E-43 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_00672 867abe7427a6279c8e92dbc3037a3a78 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 169 186 4.5E-43 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_00672 867abe7427a6279c8e92dbc3037a3a78 249 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 123 139 4.5E-43 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_00672 867abe7427a6279c8e92dbc3037a3a78 249 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 244 6.1E-58 T 14-10-2018 DB29_00672 867abe7427a6279c8e92dbc3037a3a78 249 Gene3D G3DSA:3.40.50.720 2 248 1.6E-75 T 14-10-2018 DB29_00672 867abe7427a6279c8e92dbc3037a3a78 249 SUPERFAMILY SSF51735 7 245 5.82E-74 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_01331 372491a02e0e625fe04323a517091c43 1049 TIGRFAM TIGR03929 T7_esaA_Nterm: type VII secretion protein EsaA 10 200 5.6E-51 T 14-10-2018 IPR023838 Type VII secretion system EsaA GO:0016021 DB29_03876 5ae4b9e07acaa4fcff35a2b59dabf163 93 Gene3D G3DSA:1.10.287.750 3 92 2.6E-34 T 14-10-2018 IPR036270 UPF0358 superfamily DB29_03876 5ae4b9e07acaa4fcff35a2b59dabf163 93 Pfam PF07408 Protein of unknown function (DUF1507) 9 91 2.0E-39 T 14-10-2018 IPR009983 Uncharacterised protein family UPF0358 DB29_03876 5ae4b9e07acaa4fcff35a2b59dabf163 93 SUPERFAMILY SSF140404 7 83 1.96E-34 T 14-10-2018 IPR036270 UPF0358 superfamily DB29_03876 5ae4b9e07acaa4fcff35a2b59dabf163 93 Hamap MF_01560 UPF0358 protein . 3 93 26.884 T 14-10-2018 IPR009983 Uncharacterised protein family UPF0358 DB29_03574 af33e0bbc9e24f325d45ac23767a0527 78 Pfam PF05164 Cell division protein ZapA 11 75 5.7E-19 T 14-10-2018 IPR007838 Cell division protein ZapA-like DB29_03574 af33e0bbc9e24f325d45ac23767a0527 78 SUPERFAMILY SSF102829 11 76 1.7E-19 T 14-10-2018 IPR036192 Cell division protein ZapA-like superfamily DB29_01487 8669af85b0f9b2f4b1d3f10673ac547b 412 SUPERFAMILY SSF103473 18 405 6.41E-46 T 14-10-2018 IPR036259 MFS transporter superfamily DB29_01487 8669af85b0f9b2f4b1d3f10673ac547b 412 Gene3D G3DSA:1.20.1250.20 16 405 8.4E-37 T 14-10-2018 DB29_01487 8669af85b0f9b2f4b1d3f10673ac547b 412 Pfam PF07690 Major Facilitator Superfamily 34 298 5.4E-19 T 14-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 DB29_03508 bdaa9f0daac9f0b2bdfdbdccd188d0dd 328 PIRSF PIRSF026567 1 327 9.1E-133 T 14-10-2018 IPR016843 S-adenosyl-L-methionine dependent adenine methyltransferase, bacteria, predicted DB29_03508 bdaa9f0daac9f0b2bdfdbdccd188d0dd 328 Pfam PF02384 N-6 DNA Methylase 94 293 7.9E-12 T 14-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 DB29_03508 bdaa9f0daac9f0b2bdfdbdccd188d0dd 328 Gene3D G3DSA:1.10.150.470 1 84 9.6E-23 T 14-10-2018 DB29_03508 bdaa9f0daac9f0b2bdfdbdccd188d0dd 328 SUPERFAMILY SSF53335 9 325 1.91E-38 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DB29_03508 bdaa9f0daac9f0b2bdfdbdccd188d0dd 328 Gene3D G3DSA:3.40.50.150 87 326 5.5E-45 T 14-10-2018 DB29_04239 1f02cc31f17fd308c7ccecb15afd5955 683 Pfam PF06605 Prophage endopeptidase tail 39 325 4.8E-32 T 14-10-2018 IPR010572 Prophage tail endopeptidase DB29_04239 1f02cc31f17fd308c7ccecb15afd5955 683 Gene3D G3DSA:3.55.50.40 87 175 4.0E-6 T 14-10-2018 DB29_04239 1f02cc31f17fd308c7ccecb15afd5955 683 TIGRFAM TIGR01665 put_anti_recept: phage minor structural protein, N-terminal region 23 311 1.0E-7 T 14-10-2018 IPR007119 Phage minor structural protein, N-terminal domain DB29_03901 226c30613de16cd4edfbb33552f15794 171 Pfam PF02620 Uncharacterized ACR, COG1399 56 167 2.3E-18 T 14-10-2018 IPR003772 Large ribosomal RNA subunit accumulation protein YceD DB29_03388 f67061d8748fb37667ad80d777699fdb 90 SMART SM00411 1 90 2.0E-49 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DB29_03388 f67061d8748fb37667ad80d777699fdb 90 Gene3D G3DSA:4.10.520.10 1 90 1.1E-39 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 DB29_03388 f67061d8748fb37667ad80d777699fdb 90 SUPERFAMILY SSF47729 1 90 1.12E-34 T 14-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 DB29_03388 f67061d8748fb37667ad80d777699fdb 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 1.5E-36 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DB29_03388 f67061d8748fb37667ad80d777699fdb 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 14-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 DB29_03388 f67061d8748fb37667ad80d777699fdb 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 1.1E-20 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DB29_03388 f67061d8748fb37667ad80d777699fdb 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 1.1E-20 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DB29_03388 f67061d8748fb37667ad80d777699fdb 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 1.1E-20 T 14-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 DB29_02618 ebb97dfde4fd8273c105a13672ea2cba 493 Pfam PF01970 Tripartite tricarboxylate transporter TctA family 13 434 2.9E-132 T 14-10-2018 IPR002823 Protein of unknown function DUF112, transmembrane DB29_04017 47e0eebe9568d44bbe3957c20e78644c 68 Pfam PF06289 Flagellar protein (FlbD) 1 58 7.4E-22 T 14-10-2018 IPR009384 Swarming motility protein SwrD-like DB29_01680 a21e11a2d824bb8938339c301ee6cb8a 323 Gene3D G3DSA:2.60.120.10 27 126 1.1E-11 T 14-10-2018 IPR014710 RmlC-like jelly roll fold DB29_01680 a21e11a2d824bb8938339c301ee6cb8a 323 Pfam PF02311 AraC-like ligand binding domain 51 185 4.5E-10 T 14-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 DB29_01680 a21e11a2d824bb8938339c301ee6cb8a 323 Pfam PF12833 Helix-turn-helix domain 237 315 1.1E-18 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DB29_01680 a21e11a2d824bb8938339c301ee6cb8a 323 SUPERFAMILY SSF46689 267 318 1.43E-13 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DB29_01680 a21e11a2d824bb8938339c301ee6cb8a 323 Gene3D G3DSA:1.10.10.60 264 319 5.4E-16 T 14-10-2018 DB29_01680 a21e11a2d824bb8938339c301ee6cb8a 323 SUPERFAMILY SSF51182 59 127 3.56E-12 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily DB29_01680 a21e11a2d824bb8938339c301ee6cb8a 323 SMART SM00342 231 314 1.1E-20 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DB29_01680 a21e11a2d824bb8938339c301ee6cb8a 323 Gene3D G3DSA:1.10.10.60 214 263 5.4E-7 T 14-10-2018 DB29_00832 9af23f7a1c40214f2fc30290e2e459ca 189 TIGRFAM TIGR00821 EII-GUT: PTS system, glucitol/sorbitol-specific, IIC component 1 178 3.4E-77 T 14-10-2018 IPR004699 Phosphotransferase system, enzyme II sorbitol-specific factor GO:0009401|GO:0016021 DB29_00832 9af23f7a1c40214f2fc30290e2e459ca 189 Pfam PF03608 PTS system enzyme II sorbitol-specific factor 4 170 1.0E-75 T 14-10-2018 IPR004699 Phosphotransferase system, enzyme II sorbitol-specific factor GO:0009401|GO:0016021 DB29_00832 9af23f7a1c40214f2fc30290e2e459ca 189 PIRSF PIRSF038321 1 181 1.4E-89 T 14-10-2018 IPR004699 Phosphotransferase system, enzyme II sorbitol-specific factor GO:0009401|GO:0016021 DB29_00984 401688d46c4f191260e0dfe4121df96f 348 Gene3D G3DSA:1.25.40.10 174 259 2.8E-5 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DB29_00984 401688d46c4f191260e0dfe4121df96f 348 SUPERFAMILY SSF48452 162 326 2.82E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DB29_00242 1c56014d5e2bf11a3091db8eb5fdfec6 146 Gene3D G3DSA:3.10.580.10 2 146 1.2E-51 T 14-10-2018 DB29_00242 1c56014d5e2bf11a3091db8eb5fdfec6 146 SMART SM00116 94 140 1.6 T 14-10-2018 IPR000644 CBS domain DB29_00242 1c56014d5e2bf11a3091db8eb5fdfec6 146 SMART SM00116 24 72 3.4 T 14-10-2018 IPR000644 CBS domain DB29_00242 1c56014d5e2bf11a3091db8eb5fdfec6 146 Pfam PF00571 CBS domain 88 139 3.0E-8 T 14-10-2018 IPR000644 CBS domain DB29_00242 1c56014d5e2bf11a3091db8eb5fdfec6 146 SUPERFAMILY SSF54631 17 138 2.53E-28 T 14-10-2018 DB29_02008 0266321ca5b704be41252277c3e30a1b 64 Pfam PF10764 Inhibitor of sigma-G Gin 16 60 1.4E-10 T 14-10-2018 IPR019700 Anti-sigma-G factor Gin DB29_03614 2bde2917043d528591040a77160003e7 197 Gene3D G3DSA:3.20.19.10 1 173 3.1E-73 T 14-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 DB29_03614 2bde2917043d528591040a77160003e7 197 SUPERFAMILY SSF52016 1 191 2.16E-60 T 14-10-2018 DB29_03614 2bde2917043d528591040a77160003e7 197 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 185 9.3E-81 T 14-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 DB29_03614 2bde2917043d528591040a77160003e7 197 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 196 40.812 T 14-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 DB29_03614 2bde2917043d528591040a77160003e7 197 Pfam PF00694 Aconitase C-terminal domain 4 122 4.3E-35 T 14-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 DB29_02955 595129bdfd0602c64c8fe2598bcdb3bb 174 SUPERFAMILY SSF81301 1 149 7.52E-27 T 14-10-2018 DB29_02955 595129bdfd0602c64c8fe2598bcdb3bb 174 Gene3D G3DSA:3.30.460.40 1 148 8.8E-25 T 14-10-2018 DB29_04383 13c54f02252dcb0977b1142e878ee102 124 Pfam PF13376 Bacteriocin-protection, YdeI or OmpD-Associated 61 119 8.4E-21 T 14-10-2018 DB29_01411 d3ad0a0dfae6a4cc43d5c5fbc07a1135 209 Gene3D G3DSA:3.40.50.720 4 129 8.4E-26 T 14-10-2018 DB29_01411 d3ad0a0dfae6a4cc43d5c5fbc07a1135 209 SUPERFAMILY SSF51735 1 99 4.49E-12 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_01411 d3ad0a0dfae6a4cc43d5c5fbc07a1135 209 SUPERFAMILY SSF75615 108 205 9.68E-17 T 14-10-2018 DB29_01411 d3ad0a0dfae6a4cc43d5c5fbc07a1135 209 Gene3D G3DSA:1.10.8.610 130 202 1.1E-9 T 14-10-2018 DB29_01411 d3ad0a0dfae6a4cc43d5c5fbc07a1135 209 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 4 169 2.1E-19 T 14-10-2018 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 DB29_01411 d3ad0a0dfae6a4cc43d5c5fbc07a1135 209 Pfam PF13241 Putative NAD(P)-binding 7 114 6.9E-16 T 14-10-2018 DB29_03322 bc373969ada755d660e94c3a797fbf9e 436 Pfam PF01458 Uncharacterized protein family (UPF0051) 186 409 3.5E-61 T 14-10-2018 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 DB29_03322 bc373969ada755d660e94c3a797fbf9e 436 TIGRFAM TIGR01981 sufD: FeS assembly protein SufD 152 425 2.1E-75 T 14-10-2018 IPR011542 SUF system FeS cluster assembly, SufD GO:0016226 DB29_03322 bc373969ada755d660e94c3a797fbf9e 436 SUPERFAMILY SSF101960 15 433 3.01E-116 T 14-10-2018 IPR037284 SUF system FeS cluster assembly, SufBD superfamily DB29_00851 3e8143251895ed5f9884850cf782eddd 199 SUPERFAMILY SSF55729 15 184 7.32E-37 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase DB29_00851 3e8143251895ed5f9884850cf782eddd 199 Gene3D G3DSA:3.40.630.30 7 197 4.6E-37 T 14-10-2018 DB29_00851 3e8143251895ed5f9884850cf782eddd 199 Pfam PF13302 Acetyltransferase (GNAT) domain 20 159 1.1E-19 T 14-10-2018 IPR000182 GNAT domain DB29_02639 e76ee35e416bb3b4b73b15bd55369ce2 277 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 89 266 1.3E-21 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DB29_02639 e76ee35e416bb3b4b73b15bd55369ce2 277 Gene3D G3DSA:1.10.3720.10 2 268 4.8E-71 T 14-10-2018 IPR035906 MetI-like superfamily DB29_02639 e76ee35e416bb3b4b73b15bd55369ce2 277 SUPERFAMILY SSF161098 8 276 1.03E-76 T 14-10-2018 IPR035906 MetI-like superfamily DB29_02811 0063a0ca92c3d8547ecfaf203143e057 294 Pfam PF04294 VanW like protein 163 285 5.4E-47 T 14-10-2018 IPR007391 Vancomycin resistance VanW DB29_01574 171a5e8a8c3667189bb1ea187ddb8166 497 Pfam PF01970 Tripartite tricarboxylate transporter TctA family 18 440 9.2E-144 T 14-10-2018 IPR002823 Protein of unknown function DUF112, transmembrane DB29_01051 4522cdf64b3b7e6de46de4161c169432 373 Gene3D G3DSA:1.20.1440.30 115 243 4.6E-30 T 14-10-2018 DB29_01051 4522cdf64b3b7e6de46de4161c169432 373 Gene3D G3DSA:3.40.1660.10 11 367 4.6E-30 T 14-10-2018 DB29_01051 4522cdf64b3b7e6de46de4161c169432 373 SUPERFAMILY SSF159501 9 369 3.66E-74 T 14-10-2018 DB29_01051 4522cdf64b3b7e6de46de4161c169432 373 Gene3D G3DSA:3.30.1870.10 49 114 4.6E-30 T 14-10-2018 DB29_01051 4522cdf64b3b7e6de46de4161c169432 373 Pfam PF05139 Erythromycin esterase 47 364 7.7E-29 T 14-10-2018 IPR007815 Erythromycin esterase GO:0046677 DB29_04066 9b5e8703076df29ca5f0de2f6348d50a 243 SUPERFAMILY SSF52096 41 227 1.33E-37 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily DB29_04066 9b5e8703076df29ca5f0de2f6348d50a 243 Pfam PF00574 Clp protease 43 219 4.1E-36 T 14-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA DB29_04066 9b5e8703076df29ca5f0de2f6348d50a 243 Gene3D G3DSA:3.90.226.10 44 220 2.4E-30 T 14-10-2018 DB29_00510 b2743789a5f46059f0a7c67b6a4305a4 287 Gene3D G3DSA:1.10.10.2840 166 286 1.1E-13 T 14-10-2018 DB29_00510 b2743789a5f46059f0a7c67b6a4305a4 287 Pfam PF13556 PucR C-terminal helix-turn-helix domain 230 282 7.1E-15 T 14-10-2018 IPR025736 PucR C-terminal helix-turn-helix domain DB29_02376 57df46b9e3a524a497ec26ea98f0a508 90 Pfam PF14542 GCN5-related N-acetyl-transferase 9 87 1.3E-23 T 14-10-2018 IPR031165 Yjdj-type Gcn5-related N-acetyltransferase DB29_02376 57df46b9e3a524a497ec26ea98f0a508 90 SUPERFAMILY SSF55729 4 87 1.05E-23 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase DB29_02376 57df46b9e3a524a497ec26ea98f0a508 90 Gene3D G3DSA:3.40.630.30 1 90 1.6E-26 T 14-10-2018 DB29_00724 9fc5cf6ace8f08d20fa8a1446a3b8d9a 462 Pfam PF01235 Sodium:alanine symporter family 50 446 2.1E-148 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 DB29_00724 9fc5cf6ace8f08d20fa8a1446a3b8d9a 462 PRINTS PR00175 Sodium/alanine symporter signature 178 196 1.3E-56 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 DB29_00724 9fc5cf6ace8f08d20fa8a1446a3b8d9a 462 PRINTS PR00175 Sodium/alanine symporter signature 343 365 1.3E-56 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 DB29_00724 9fc5cf6ace8f08d20fa8a1446a3b8d9a 462 PRINTS PR00175 Sodium/alanine symporter signature 88 110 1.3E-56 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 DB29_00724 9fc5cf6ace8f08d20fa8a1446a3b8d9a 462 PRINTS PR00175 Sodium/alanine symporter signature 296 314 1.3E-56 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 DB29_00724 9fc5cf6ace8f08d20fa8a1446a3b8d9a 462 PRINTS PR00175 Sodium/alanine symporter signature 403 423 1.3E-56 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 DB29_00724 9fc5cf6ace8f08d20fa8a1446a3b8d9a 462 PRINTS PR00175 Sodium/alanine symporter signature 206 225 1.3E-56 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 DB29_00724 9fc5cf6ace8f08d20fa8a1446a3b8d9a 462 TIGRFAM TIGR00835 agcS: amino acid carrier protein 19 434 1.0E-140 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 DB29_03031 db03e823ccc212eb74a6a0918052fc5d 443 Pfam PF13183 4Fe-4S dicluster domain 26 95 1.2E-12 T 14-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain DB29_03031 db03e823ccc212eb74a6a0918052fc5d 443 PIRSF PIRSF000139 9 443 4.5E-139 T 14-10-2018 DB29_03031 db03e823ccc212eb74a6a0918052fc5d 443 SUPERFAMILY SSF46548 24 107 5.02E-18 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 DB29_03031 db03e823ccc212eb74a6a0918052fc5d 443 Pfam PF02754 Cysteine-rich domain 332 417 5.7E-16 T 14-10-2018 IPR004017 Cysteine-rich domain DB29_03031 db03e823ccc212eb74a6a0918052fc5d 443 Pfam PF02754 Cysteine-rich domain 201 283 5.9E-19 T 14-10-2018 IPR004017 Cysteine-rich domain DB29_03031 db03e823ccc212eb74a6a0918052fc5d 443 Gene3D G3DSA:1.10.1060.10 2 117 4.0E-7 T 14-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 DB29_03031 db03e823ccc212eb74a6a0918052fc5d 443 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 81 92 - T 14-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site DB29_01108 d475d17d2e00c43cdd0378fe21a75ea3 190 Pfam PF12804 MobA-like NTP transferase domain 5 163 6.6E-31 T 14-10-2018 IPR025877 MobA-like NTP transferase DB29_01108 d475d17d2e00c43cdd0378fe21a75ea3 190 SUPERFAMILY SSF53448 1 188 6.08E-28 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DB29_01108 d475d17d2e00c43cdd0378fe21a75ea3 190 Gene3D G3DSA:3.90.550.10 1 190 1.7E-40 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DB29_00903 75ef9cd05a59c78bf32f6890c0e3e44c 161 SUPERFAMILY SSF109854 2 139 3.48E-31 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes DB29_00903 75ef9cd05a59c78bf32f6890c0e3e44c 161 Pfam PF05163 DinB family 3 151 1.2E-29 T 14-10-2018 IPR007837 DNA damage-inducible protein DinB DB29_00903 75ef9cd05a59c78bf32f6890c0e3e44c 161 Gene3D G3DSA:1.20.120.450 1 160 1.7E-44 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes DB29_03865 c15e1f4fa120962734cd6c4d1ffdcaed 492 Gene3D G3DSA:3.90.105.10 423 479 6.9E-18 T 14-10-2018 DB29_03865 c15e1f4fa120962734cd6c4d1ffdcaed 492 Gene3D G3DSA:3.90.1150.10 310 408 8.6E-6 T 14-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 DB29_03865 c15e1f4fa120962734cd6c4d1ffdcaed 492 Gene3D G3DSA:3.40.640.10 8 285 6.6E-95 T 14-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 DB29_03865 c15e1f4fa120962734cd6c4d1ffdcaed 492 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 378 461 4.2E-11 T 14-10-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 DB29_03865 c15e1f4fa120962734cd6c4d1ffdcaed 492 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 223 237 - T 14-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 DB29_03865 c15e1f4fa120962734cd6c4d1ffdcaed 492 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 8 373 2.0E-101 T 14-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 DB29_03865 c15e1f4fa120962734cd6c4d1ffdcaed 492 SUPERFAMILY SSF55904 344 490 3.53E-38 T 14-10-2018 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily GO:0003824 DB29_03865 c15e1f4fa120962734cd6c4d1ffdcaed 492 SUPERFAMILY SSF53383 8 384 7.98E-95 T 14-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase DB29_00409 f996fe5926cf1aab0a7d8a378bd2c0d3 276 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 237 271 2.8E-6 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DB29_00409 f996fe5926cf1aab0a7d8a378bd2c0d3 276 ProSitePatterns PS00211 ABC transporters family signature. 158 172 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB29_00409 f996fe5926cf1aab0a7d8a378bd2c0d3 276 SUPERFAMILY SSF52540 8 257 9.63E-72 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_00409 f996fe5926cf1aab0a7d8a378bd2c0d3 276 SMART SM00382 43 244 1.1E-14 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_00409 f996fe5926cf1aab0a7d8a378bd2c0d3 276 Pfam PF00005 ABC transporter 35 185 1.5E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB29_00409 f996fe5926cf1aab0a7d8a378bd2c0d3 276 Gene3D G3DSA:3.40.50.300 6 276 4.1E-84 T 14-10-2018 DB29_03674 dce7eb8750c170a4074674fa67747d59 143 Pfam PF01584 CheW-like domain 6 136 3.1E-25 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 DB29_03674 dce7eb8750c170a4074674fa67747d59 143 Gene3D G3DSA:2.40.50.180 25 128 4.4E-21 T 14-10-2018 DB29_03674 dce7eb8750c170a4074674fa67747d59 143 SMART SM00260 2 133 2.8E-12 T 14-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 DB29_03674 dce7eb8750c170a4074674fa67747d59 143 SUPERFAMILY SSF50341 5 137 2.75E-26 T 14-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 DB29_03674 dce7eb8750c170a4074674fa67747d59 143 Gene3D G3DSA:2.30.30.40 9 127 4.4E-21 T 14-10-2018 DB29_03064 856e74a16a73837e32ab71510e8c9ba1 417 SUPERFAMILY SSF53850 18 403 5.74E-42 T 14-10-2018 DB29_03064 856e74a16a73837e32ab71510e8c9ba1 417 Gene3D G3DSA:3.40.190.10 41 339 1.3E-45 T 14-10-2018 DB29_03064 856e74a16a73837e32ab71510e8c9ba1 417 Gene3D G3DSA:3.40.190.10 137 392 1.3E-45 T 14-10-2018 DB29_03064 856e74a16a73837e32ab71510e8c9ba1 417 Pfam PF13416 Bacterial extracellular solute-binding protein 40 313 1.4E-24 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein DB29_02867 8c2b88169e0ef954d3a81af986da3525 205 Pfam PF00440 Bacterial regulatory proteins, tetR family 8 53 1.6E-17 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DB29_02867 8c2b88169e0ef954d3a81af986da3525 205 Gene3D G3DSA:1.10.357.10 1 200 5.8E-28 T 14-10-2018 DB29_02867 8c2b88169e0ef954d3a81af986da3525 205 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 29 52 1.2E-12 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DB29_02867 8c2b88169e0ef954d3a81af986da3525 205 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 8 21 1.2E-12 T 14-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 DB29_02867 8c2b88169e0ef954d3a81af986da3525 205 SUPERFAMILY SSF46689 3 76 5.67E-20 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DB29_02867 8c2b88169e0ef954d3a81af986da3525 205 ProSitePatterns PS01081 TetR-type HTH domain signature. 20 51 - T 14-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site DB29_00999 20ef2d4269b0f17e8a8c8b155af028a4 495 Pfam PF05043 Mga helix-turn-helix domain 82 167 2.7E-22 T 14-10-2018 IPR007737 Mga helix-turn-helix domain DB29_00999 20ef2d4269b0f17e8a8c8b155af028a4 495 Gene3D G3DSA:1.10.10.10 8 153 6.7E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_02905 67ba3c5099393abc35bd743035262ac5 255 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 39 250 4.1E-62 T 14-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 DB29_02905 67ba3c5099393abc35bd743035262ac5 255 Pfam PF13531 Bacterial extracellular solute-binding protein 34 251 6.4E-46 T 14-10-2018 DB29_02905 67ba3c5099393abc35bd743035262ac5 255 SUPERFAMILY SSF53850 33 252 2.86E-61 T 14-10-2018 DB29_02905 67ba3c5099393abc35bd743035262ac5 255 Gene3D G3DSA:3.40.190.10 36 251 4.6E-74 T 14-10-2018 DB29_02905 67ba3c5099393abc35bd743035262ac5 255 PIRSF PIRSF004846 2 255 4.1E-90 T 14-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 DB29_02905 67ba3c5099393abc35bd743035262ac5 255 Gene3D G3DSA:3.40.190.10 110 217 4.6E-74 T 14-10-2018 DB29_02223 57a9adb29c3e36725dcde86acc5d4d9a 182 Pfam PF12867 DinB superfamily 13 173 1.5E-11 T 14-10-2018 IPR024775 DinB-like domain DB29_02223 57a9adb29c3e36725dcde86acc5d4d9a 182 Gene3D G3DSA:1.20.120.450 2 180 2.4E-8 T 14-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes DB29_03739 71a65e6ac7af43a8ba1bf5d52a264fdf 227 SUPERFAMILY SSF53955 98 226 8.59E-49 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily DB29_03739 71a65e6ac7af43a8ba1bf5d52a264fdf 227 Pfam PF01464 Transglycosylase SLT domain 108 214 1.8E-30 T 14-10-2018 IPR008258 Transglycosylase SLT domain 1 DB29_03739 71a65e6ac7af43a8ba1bf5d52a264fdf 227 Gene3D G3DSA:1.10.530.10 63 227 2.7E-53 T 14-10-2018 DB29_00515 3d80f1751414dbe6992d8d142fa00824 509 SUPERFAMILY SSF52096 211 488 1.18E-82 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily DB29_00515 3d80f1751414dbe6992d8d142fa00824 509 Gene3D G3DSA:3.90.226.10 4 245 2.7E-75 T 14-10-2018 DB29_00515 3d80f1751414dbe6992d8d142fa00824 509 Pfam PF01039 Carboxyl transferase domain 26 506 4.9E-158 T 14-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 DB29_00515 3d80f1751414dbe6992d8d142fa00824 509 Gene3D G3DSA:3.90.226.10 246 508 7.7E-84 T 14-10-2018 DB29_00515 3d80f1751414dbe6992d8d142fa00824 509 SUPERFAMILY SSF52096 16 249 7.54E-65 T 14-10-2018 IPR029045 ClpP/crotonase-like domain superfamily DB29_01432 6076c959fcc71ecd0a276e7e7e9e2672 103 Gene3D G3DSA:2.60.40.3830 1 101 2.5E-27 T 14-10-2018 DB29_01432 6076c959fcc71ecd0a276e7e7e9e2672 103 Pfam PF16167 Domain of unknown function (DUF4871) 3 99 4.1E-6 T 14-10-2018 IPR032366 Protein of unknown function DUF4871 DB29_04073 65b1eddb2d6a1d1d0099299868c35f8e 82 PIRSF PIRSF004764 1 82 2.9E-28 T 14-10-2018 IPR024702 Uncharacterised conserved protein YmfJ DB29_04073 65b1eddb2d6a1d1d0099299868c35f8e 82 Gene3D G3DSA:1.10.760.20 1 82 7.3E-32 T 14-10-2018 IPR038292 YmfJ/YflH superfamily DB29_04073 65b1eddb2d6a1d1d0099299868c35f8e 82 Pfam PF11588 Protein of unknown function (DUF3243) 3 80 5.1E-35 T 14-10-2018 IPR021637 Protein of unknown function DUF3243 DB29_03083 0b0054883f83a729c8cf80a9b4e766de 472 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 7 89 3.7E-33 T 14-10-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202 DB29_03083 0b0054883f83a729c8cf80a9b4e766de 472 Gene3D G3DSA:3.40.50.2300 2 107 2.4E-40 T 14-10-2018 DB29_03083 0b0054883f83a729c8cf80a9b4e766de 472 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 8 98 3.5E-16 T 14-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 DB29_03083 0b0054883f83a729c8cf80a9b4e766de 472 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 127 460 5.3E-105 T 14-10-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 DB29_03083 0b0054883f83a729c8cf80a9b4e766de 472 Pfam PF02378 Phosphotransferase system, EIIC 141 408 8.2E-15 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 DB29_03083 0b0054883f83a729c8cf80a9b4e766de 472 SUPERFAMILY SSF52794 5 106 2.27E-37 T 14-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 DB29_03850 7d816914de6a89d19371ce96e3cf3a2c 361 TIGRFAM TIGR03181 PDH_E1_alph_x: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit 14 355 9.3E-144 T 14-10-2018 IPR017596 Pyruvate dehydrogenase E1 component subunit alpha/BCKADH E1-alpha KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 DB29_03850 7d816914de6a89d19371ce96e3cf3a2c 361 SUPERFAMILY SSF52518 12 357 2.09E-101 T 14-10-2018 IPR029061 Thiamin diphosphate-binding fold DB29_03850 7d816914de6a89d19371ce96e3cf3a2c 361 Pfam PF00676 Dehydrogenase E1 component 43 333 3.1E-94 T 14-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 DB29_03850 7d816914de6a89d19371ce96e3cf3a2c 361 Gene3D G3DSA:3.40.50.970 2 361 1.1E-122 T 14-10-2018 DB29_02432 5f866e88730f6d0d302e96ee0ea093f8 241 TIGRFAM TIGR00370 TIGR00370: sensor histidine kinase inhibitor, KipI family 11 225 6.0E-67 T 14-10-2018 IPR010016 KipI family KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 DB29_02432 5f866e88730f6d0d302e96ee0ea093f8 241 Gene3D G3DSA:2.40.100.10 102 240 2.2E-60 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily DB29_02432 5f866e88730f6d0d302e96ee0ea093f8 241 SUPERFAMILY SSF50891 104 233 1.71E-49 T 14-10-2018 IPR029000 Cyclophilin-like domain superfamily DB29_02432 5f866e88730f6d0d302e96ee0ea093f8 241 Pfam PF02682 Carboxyltransferase domain, subdomain C and D 7 217 1.8E-74 T 14-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D DB29_02432 5f866e88730f6d0d302e96ee0ea093f8 241 SMART SM00796 6 217 9.3E-100 T 14-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D DB29_02432 5f866e88730f6d0d302e96ee0ea093f8 241 SUPERFAMILY SSF160467 8 108 2.75E-13 T 14-10-2018 DB29_02432 5f866e88730f6d0d302e96ee0ea093f8 241 Gene3D G3DSA:3.30.1360.40 3 98 2.8E-20 T 14-10-2018 DB29_01365 88fed34511522b9a1b33ff088f93112b 428 Pfam PF07005 Putative sugar-binding N-terminal domain 3 226 2.5E-54 T 14-10-2018 IPR010737 Four-carbon acid sugar kinase, N-terminal domain DB29_01365 88fed34511522b9a1b33ff088f93112b 428 Gene3D G3DSA:3.40.50.10840 2 231 6.5E-60 T 14-10-2018 IPR037051 Four-carbon acid sugar kinase, N-terminal domain superfamily DB29_01365 88fed34511522b9a1b33ff088f93112b 428 SUPERFAMILY SSF142764 3 423 2.09E-87 T 14-10-2018 DB29_01365 88fed34511522b9a1b33ff088f93112b 428 Gene3D G3DSA:3.40.980.20 232 425 1.3E-11 T 14-10-2018 DB29_01365 88fed34511522b9a1b33ff088f93112b 428 Pfam PF17042 Putative nucleotide-binding of sugar-metabolising enzyme 243 415 6.8E-27 T 14-10-2018 IPR031475 Four-carbon acid sugar kinase, C-terminal domain DB29_01368 532e9ae1c9a4bbea1383e6abf7e7641e 398 TIGRFAM TIGR02887 spore_ger_x_C: germination protein, Ger(x)C family 4 389 2.8E-114 T 14-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 DB29_01368 532e9ae1c9a4bbea1383e6abf7e7641e 398 Pfam PF05504 Spore germination B3/ GerAC like, C-terminal 223 387 1.6E-32 T 14-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 DB29_01368 532e9ae1c9a4bbea1383e6abf7e7641e 398 Gene3D G3DSA:3.30.300.210 240 390 3.9E-31 T 14-10-2018 IPR038501 Spore germination GerAC superfamily DB29_03189 5ba91adb35b6b9105dd4fe11f1e19f23 342 Pfam PF00535 Glycosyl transferase family 2 13 185 4.4E-24 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 DB29_03189 5ba91adb35b6b9105dd4fe11f1e19f23 342 Gene3D G3DSA:3.90.550.10 2 226 1.2E-40 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DB29_03189 5ba91adb35b6b9105dd4fe11f1e19f23 342 SUPERFAMILY SSF53448 9 230 1.41E-44 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DB29_00124 20532bcf3e6a8df8d4194572f4ac0519 338 Gene3D G3DSA:2.50.20.10 84 201 1.7E-6 T 14-10-2018 DB29_02662 1ab30ed8deda7e3af22299f54d024606 264 PIRSF PIRSF009141 1 262 2.4E-129 T 14-10-2018 IPR008535 Protein of unknown function DUF817 DB29_02662 1ab30ed8deda7e3af22299f54d024606 264 Pfam PF05675 Protein of unknown function (DUF817) 7 241 1.6E-105 T 14-10-2018 IPR008535 Protein of unknown function DUF817 DB29_03730 f7da1091541499c3ad09364054376fb6 181 Gene3D G3DSA:3.40.630.30 1 137 3.6E-21 T 14-10-2018 DB29_03730 f7da1091541499c3ad09364054376fb6 181 SUPERFAMILY SSF55729 9 114 4.79E-9 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase DB29_03730 f7da1091541499c3ad09364054376fb6 181 Pfam PF13508 Acetyltransferase (GNAT) domain 53 111 3.3E-8 T 14-10-2018 IPR000182 GNAT domain DB29_02269 520060c42f123d7985602bd209ddc33e 98 Pfam PF17261 Family of unknown function (DUF5327) 1 98 1.6E-14 T 14-10-2018 IPR035218 Protein of unknown function DUF5327 DB29_04319 0c99b994afe1c5639239554f534e542e 145 Pfam PF06491 Disulphide isomerase 8 143 1.6E-60 T 14-10-2018 IPR009474 Putative bacilliredoxin, YphP/YqiW family DB29_04319 0c99b994afe1c5639239554f534e542e 145 TIGRFAM TIGR04191 YphP_YqiW: putative bacilliredoxin, YphP/YqiW family 8 143 2.3E-62 T 14-10-2018 IPR009474 Putative bacilliredoxin, YphP/YqiW family DB29_04319 0c99b994afe1c5639239554f534e542e 145 Gene3D G3DSA:3.40.30.10 25 143 6.6E-49 T 14-10-2018 DB29_02210 e293e9bbe8a3619aadaaf21b198ec681 149 SMART SM00871 1 149 1.4E-31 T 14-10-2018 IPR010499 Bacterial transcription activator, effector binding DB29_02210 e293e9bbe8a3619aadaaf21b198ec681 149 SUPERFAMILY SSF55136 1 149 1.57E-30 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily DB29_02210 e293e9bbe8a3619aadaaf21b198ec681 149 Pfam PF06445 GyrI-like small molecule binding domain 1 148 1.6E-29 T 14-10-2018 IPR029442 GyrI-like small molecule binding domain DB29_02210 e293e9bbe8a3619aadaaf21b198ec681 149 Gene3D G3DSA:3.20.80.10 1 149 3.3E-35 T 14-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily DB29_01821 a364a4d234e289f51cc57f87eff7eb82 600 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 600 38.363 T 14-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 DB29_01821 a364a4d234e289f51cc57f87eff7eb82 600 Pfam PF13522 Glutamine amidotransferase domain 59 192 3.8E-23 T 14-10-2018 DB29_01821 a364a4d234e289f51cc57f87eff7eb82 600 Gene3D G3DSA:3.40.50.10490 444 600 3.2E-62 T 14-10-2018 DB29_01821 a364a4d234e289f51cc57f87eff7eb82 600 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 600 4.4E-225 T 14-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 DB29_01821 a364a4d234e289f51cc57f87eff7eb82 600 Gene3D G3DSA:3.40.50.10490 243 442 4.2E-64 T 14-10-2018 DB29_01821 a364a4d234e289f51cc57f87eff7eb82 600 Gene3D G3DSA:3.60.20.10 2 240 1.2E-70 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DB29_01821 a364a4d234e289f51cc57f87eff7eb82 600 Pfam PF01380 SIS domain 288 414 6.1E-35 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 DB29_01821 a364a4d234e289f51cc57f87eff7eb82 600 Pfam PF01380 SIS domain 457 582 1.4E-18 T 14-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 DB29_01821 a364a4d234e289f51cc57f87eff7eb82 600 SUPERFAMILY SSF56235 2 235 2.49E-63 T 14-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal DB29_01821 a364a4d234e289f51cc57f87eff7eb82 600 SUPERFAMILY SSF53697 244 600 1.51E-95 T 14-10-2018 DB29_01468 9570eec018af09c1fbf07a4b89c812a4 164 Gene3D G3DSA:1.20.5.340 11 141 3.2E-16 T 14-10-2018 DB29_01468 9570eec018af09c1fbf07a4b89c812a4 164 SUPERFAMILY SSF57997 19 162 1.18E-15 T 14-10-2018 DB29_03694 518ba117ea2c66f793176bee427110a3 152 SUPERFAMILY SSF55729 40 141 2.99E-23 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase DB29_03694 518ba117ea2c66f793176bee427110a3 152 Gene3D G3DSA:3.40.630.30 2 150 4.8E-26 T 14-10-2018 DB29_03694 518ba117ea2c66f793176bee427110a3 152 Pfam PF00583 Acetyltransferase (GNAT) family 48 140 1.0E-15 T 14-10-2018 IPR000182 GNAT domain DB29_03220 b69797ebe1b5098bffe1c07953f562cd 107 Gene3D G3DSA:3.30.160.170 13 103 9.1E-24 T 14-10-2018 IPR035924 FlaG-like superfamily DB29_03220 b69797ebe1b5098bffe1c07953f562cd 107 Pfam PF03646 FlaG protein 19 104 3.7E-21 T 14-10-2018 IPR005186 FlaG protein DB29_03220 b69797ebe1b5098bffe1c07953f562cd 107 SUPERFAMILY SSF160214 11 105 1.57E-22 T 14-10-2018 IPR035924 FlaG-like superfamily DB29_03559 4839e9e43f76c0eb2a2d23291ce2f628 224 SMART SM00382 30 217 1.7E-13 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_03559 4839e9e43f76c0eb2a2d23291ce2f628 224 Pfam PF00005 ABC transporter 22 169 1.8E-33 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB29_03559 4839e9e43f76c0eb2a2d23291ce2f628 224 Gene3D G3DSA:3.40.50.300 1 224 5.7E-67 T 14-10-2018 DB29_03559 4839e9e43f76c0eb2a2d23291ce2f628 224 SUPERFAMILY SSF52540 1 221 4.64E-72 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_03559 4839e9e43f76c0eb2a2d23291ce2f628 224 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB29_01497 5c43ef5aa4e2ee0aa5adb3484828e84c 88 Pfam PF17279 Family of unknown function (DUF5344) 1 87 1.4E-21 T 14-10-2018 DB29_03505 11840f94c971cfd85bdae0dff5ce58f6 140 TIGRFAM TIGR02874 spore_ytfJ: sporulation protein YtfJ 3 125 1.4E-54 T 14-10-2018 IPR014229 Sporulation protein YtfJ DB29_03505 11840f94c971cfd85bdae0dff5ce58f6 140 PIRSF PIRSF021377 1 137 4.9E-62 T 14-10-2018 IPR014229 Sporulation protein YtfJ DB29_03505 11840f94c971cfd85bdae0dff5ce58f6 140 Pfam PF09579 Sporulation protein YtfJ (Spore_YtfJ) 31 115 1.2E-29 T 14-10-2018 IPR014229 Sporulation protein YtfJ DB29_03240 614788f164f48dd30244434030c403f2 114 Pfam PF04020 Mycobacterial 4 TMS phage holin, superfamily IV 1 105 3.6E-28 T 14-10-2018 IPR007165 Mycobacterial 4 TMS phage holin, superfamily IV DB29_03079 0acb60ae559561ee5379fadb49fcd51b 159 Gene3D G3DSA:1.25.40.10 5 156 3.5E-12 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DB29_03186 a32781bdc32135437f313420b2730205 698 Pfam PF02867 Ribonucleotide reductase, barrel domain 166 682 1.5E-138 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 DB29_03186 a32781bdc32135437f313420b2730205 698 SUPERFAMILY SSF51998 165 687 9.77E-170 T 14-10-2018 DB29_03186 a32781bdc32135437f313420b2730205 698 Gene3D G3DSA:1.10.1650.20 284 336 4.5E-185 T 14-10-2018 DB29_03186 a32781bdc32135437f313420b2730205 698 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 93 686 6.9E-177 T 14-10-2018 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 DB29_03186 a32781bdc32135437f313420b2730205 698 Pfam PF08343 Ribonucleotide reductase N-terminal 7 87 1.8E-27 T 14-10-2018 IPR013554 Ribonucleotide reductase N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 DB29_03186 a32781bdc32135437f313420b2730205 698 TIGRFAM TIGR04170 RNR_1b_NrdE: ribonucleoside-diphosphate reductase, class 1b, alpha subunit 6 698 0.0 T 14-10-2018 IPR026459 Ribonucleotide reductase, class 1b, subunit NrdE KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 DB29_03186 a32781bdc32135437f313420b2730205 698 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 89 161 1.3E-14 T 14-10-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 DB29_03186 a32781bdc32135437f313420b2730205 698 PRINTS PR01183 Ribonucleotide reductase large chain signature 374 385 4.5E-28 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 DB29_03186 a32781bdc32135437f313420b2730205 698 PRINTS PR01183 Ribonucleotide reductase large chain signature 241 260 4.5E-28 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 DB29_03186 a32781bdc32135437f313420b2730205 698 PRINTS PR01183 Ribonucleotide reductase large chain signature 418 441 4.5E-28 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 DB29_03186 a32781bdc32135437f313420b2730205 698 PRINTS PR01183 Ribonucleotide reductase large chain signature 457 479 4.5E-28 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 DB29_03186 a32781bdc32135437f313420b2730205 698 PRINTS PR01183 Ribonucleotide reductase large chain signature 485 508 4.5E-28 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 DB29_03186 a32781bdc32135437f313420b2730205 698 PRINTS PR01183 Ribonucleotide reductase large chain signature 567 594 4.5E-28 T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 DB29_03186 a32781bdc32135437f313420b2730205 698 SUPERFAMILY SSF48168 6 164 3.92E-50 T 14-10-2018 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 DB29_03186 a32781bdc32135437f313420b2730205 698 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 556 578 - T 14-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 DB29_03186 a32781bdc32135437f313420b2730205 698 Gene3D G3DSA:3.20.70.20 150 684 4.5E-185 T 14-10-2018 DB29_01391 efa4bf4d3b4d1d4957e50ed584354a3d 320 Gene3D G3DSA:1.20.1530.20 1 309 1.4E-38 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily DB29_01391 efa4bf4d3b4d1d4957e50ed584354a3d 320 Pfam PF01758 Sodium Bile acid symporter family 38 220 3.9E-25 T 14-10-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 DB29_02534 fe29c306218e95eb2089655d01264063 90 Pfam PF17279 Family of unknown function (DUF5344) 2 87 1.1E-20 T 14-10-2018 DB29_01845 82d80507aec855e11956edf50e43766a 245 Pfam PF13847 Methyltransferase domain 34 164 7.1E-11 T 14-10-2018 IPR025714 Methyltransferase domain DB29_01845 82d80507aec855e11956edf50e43766a 245 SUPERFAMILY SSF53335 4 235 8.37E-27 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DB29_01845 82d80507aec855e11956edf50e43766a 245 Gene3D G3DSA:3.40.50.150 20 224 4.5E-26 T 14-10-2018 DB29_01845 82d80507aec855e11956edf50e43766a 245 Gene3D G3DSA:2.20.25.110 141 206 4.5E-26 T 14-10-2018 DB29_02098 855750f80732cf354aefcb74b45a490a 168 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 26 151 1.6E-35 T 14-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ DB29_03609 ceb1cae5e5a5fb63637793b54072cbb9 172 Pfam PF10369 Small subunit of acetolactate synthase 85 157 9.6E-28 T 14-10-2018 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 DB29_03609 ceb1cae5e5a5fb63637793b54072cbb9 172 SUPERFAMILY SSF55021 2 77 1.32E-19 T 14-10-2018 DB29_03609 ceb1cae5e5a5fb63637793b54072cbb9 172 SUPERFAMILY SSF55021 80 160 2.55E-26 T 14-10-2018 DB29_03609 ceb1cae5e5a5fb63637793b54072cbb9 172 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 1 77 1.0E-38 T 14-10-2018 DB29_03609 ceb1cae5e5a5fb63637793b54072cbb9 172 Gene3D G3DSA:3.30.70.260 1 80 1.0E-31 T 14-10-2018 DB29_03609 ceb1cae5e5a5fb63637793b54072cbb9 172 Pfam PF01842 ACT domain 4 68 6.7E-13 T 14-10-2018 IPR002912 ACT domain DB29_03609 ceb1cae5e5a5fb63637793b54072cbb9 172 Gene3D G3DSA:3.30.70.1150 84 162 3.4E-29 T 14-10-2018 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal DB29_03609 ceb1cae5e5a5fb63637793b54072cbb9 172 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 1 158 7.9E-62 T 14-10-2018 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 DB29_00317 9150afebc96a95c9b0fd16e56116f11b 271 Hamap MF_00921 Putative pyruvate, phosphate dikinase regulatory protein. 8 270 61.328 T 14-10-2018 IPR026565 Putative pyruvate, phosphate dikinase regulatory protein DB29_00317 9150afebc96a95c9b0fd16e56116f11b 271 Pfam PF03618 Kinase/pyrophosphorylase 10 264 3.8E-99 T 14-10-2018 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 DB29_02634 82e2ba1a3d1101dc63465876b26a29f9 598 Gene3D G3DSA:2.115.10.20 34 183 3.1E-19 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily DB29_02634 82e2ba1a3d1101dc63465876b26a29f9 598 SUPERFAMILY SSF75005 104 268 3.14E-16 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily DB29_00845 a031ae7d53ff60869e2dc43f55aa666b 319 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 107 313 3.0E-18 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DB29_00845 a031ae7d53ff60869e2dc43f55aa666b 319 SUPERFAMILY SSF161098 75 304 1.19E-50 T 14-10-2018 IPR035906 MetI-like superfamily DB29_00845 a031ae7d53ff60869e2dc43f55aa666b 319 Gene3D G3DSA:1.10.3720.10 71 319 1.2E-63 T 14-10-2018 IPR035906 MetI-like superfamily DB29_02470 6bb5cf8e7326ba652a4c04633e21bc62 170 Pfam PF09349 OHCU decarboxylase 8 160 7.1E-39 T 14-10-2018 IPR018020 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 DB29_02470 6bb5cf8e7326ba652a4c04633e21bc62 170 SUPERFAMILY SSF158694 3 162 1.12E-44 T 14-10-2018 IPR036778 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase superfamily KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 DB29_02470 6bb5cf8e7326ba652a4c04633e21bc62 170 TIGRFAM TIGR03164 UHCUDC: OHCU decarboxylase 11 161 4.2E-64 T 14-10-2018 IPR017580 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase, type 1 GO:0019428 KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 DB29_02470 6bb5cf8e7326ba652a4c04633e21bc62 170 Gene3D G3DSA:1.10.3330.10 2 168 1.5E-50 T 14-10-2018 IPR036778 Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase superfamily KEGG: 00230+4.1.1.97|MetaCyc: PWY-5691|MetaCyc: PWY-7394|MetaCyc: PWY-7849 DB29_03734 7fca752b8c28682816e94aa9848305ad 402 PIRSF PIRSF007487 1 380 1.4E-96 T 14-10-2018 IPR021176 Competence-induced protein CoiA DB29_03734 7fca752b8c28682816e94aa9848305ad 402 Pfam PF06054 Competence protein CoiA-like family 4 228 5.5E-46 T 14-10-2018 IPR010330 Competence-induced protein CoiA-like DB29_03289 e407698f3234062665a7c8d67ebbf9a0 150 SUPERFAMILY SSF50475 24 87 3.77E-5 T 14-10-2018 DB29_00078 e217b368df1b004b99c2c3a3da95e28a 155 Pfam PF10673 Protein of unknown function (DUF2487) 9 151 3.6E-49 T 14-10-2018 IPR019615 Protein of unknown function DUF2487 DB29_00496 44b87d08a8bc3e29e7dd1aa5ac344d36 42 Pfam PF09680 Protein of unknown function (Tiny_TM_bacill) 18 41 1.8E-12 T 14-10-2018 IPR010070 Sporulation protein YjcZ-like DB29_00496 44b87d08a8bc3e29e7dd1aa5ac344d36 42 TIGRFAM TIGR01732 tiny_TM_bacill: conserved hypothetical protein 16 41 1.1E-13 T 14-10-2018 IPR010070 Sporulation protein YjcZ-like DB29_02084 d08b88976dacc26023b80b76cb1c6361 236 SMART SM00448 3 113 4.1E-47 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DB29_02084 d08b88976dacc26023b80b76cb1c6361 236 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 228 6.6E-26 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DB29_02084 d08b88976dacc26023b80b76cb1c6361 236 Gene3D G3DSA:1.10.10.10 131 234 1.8E-37 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_02084 d08b88976dacc26023b80b76cb1c6361 236 SUPERFAMILY SSF52172 2 124 1.15E-43 T 14-10-2018 IPR011006 CheY-like superfamily DB29_02084 d08b88976dacc26023b80b76cb1c6361 236 Pfam PF00072 Response regulator receiver domain 5 114 7.3E-30 T 14-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 DB29_02084 d08b88976dacc26023b80b76cb1c6361 236 SMART SM00862 152 228 1.5E-24 T 14-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 DB29_02084 d08b88976dacc26023b80b76cb1c6361 236 Gene3D G3DSA:3.40.50.2300 1 130 2.7E-40 T 14-10-2018 DB29_02084 d08b88976dacc26023b80b76cb1c6361 236 SUPERFAMILY SSF46894 128 229 1.62E-29 T 14-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 DB29_01063 be31352fb7f61e2c2f8f450fb9f6059a 185 Gene3D G3DSA:3.40.30.10 2 176 9.6E-17 T 14-10-2018 DB29_01063 be31352fb7f61e2c2f8f450fb9f6059a 185 Pfam PF14595 Thioredoxin 10 138 7.4E-39 T 14-10-2018 DB29_01063 be31352fb7f61e2c2f8f450fb9f6059a 185 SUPERFAMILY SSF52833 41 137 1.75E-9 T 14-10-2018 IPR036249 Thioredoxin-like superfamily DB29_02167 e84b4370c89626ccde2bf43d8aee79e8 112 Pfam PF03551 Transcriptional regulator PadR-like family 16 87 2.3E-23 T 14-10-2018 IPR005149 Transcription regulator PadR, N-terminal DB29_02167 e84b4370c89626ccde2bf43d8aee79e8 112 Gene3D G3DSA:1.10.10.10 1 111 4.7E-34 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_02167 e84b4370c89626ccde2bf43d8aee79e8 112 SUPERFAMILY SSF46785 5 105 7.64E-24 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_00888 50036f5f595bd6255ab2de7104ada332 72 Gene3D G3DSA:1.10.1660.10 1 58 1.8E-8 T 14-10-2018 DB29_00888 50036f5f595bd6255ab2de7104ada332 72 SUPERFAMILY SSF46955 1 64 1.28E-9 T 14-10-2018 IPR009061 Putative DNA-binding domain superfamily DB29_03584 69a4bedd0a0f9390f2823c9c923d371b 104 Pfam PF00085 Thioredoxin 3 102 9.1E-32 T 14-10-2018 IPR013766 Thioredoxin domain GO:0045454 DB29_03584 69a4bedd0a0f9390f2823c9c923d371b 104 Gene3D G3DSA:3.40.30.10 1 104 4.2E-37 T 14-10-2018 DB29_03584 69a4bedd0a0f9390f2823c9c923d371b 104 ProSitePatterns PS00194 Thioredoxin family active site. 21 39 - T 14-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 DB29_03584 69a4bedd0a0f9390f2823c9c923d371b 104 SUPERFAMILY SSF52833 3 103 4.75E-38 T 14-10-2018 IPR036249 Thioredoxin-like superfamily DB29_03584 69a4bedd0a0f9390f2823c9c923d371b 104 PRINTS PR00421 Thioredoxin family signature 68 79 4.1E-9 T 14-10-2018 DB29_03584 69a4bedd0a0f9390f2823c9c923d371b 104 PRINTS PR00421 Thioredoxin family signature 28 37 4.1E-9 T 14-10-2018 DB29_03584 69a4bedd0a0f9390f2823c9c923d371b 104 PRINTS PR00421 Thioredoxin family signature 20 28 4.1E-9 T 14-10-2018 DB29_03584 69a4bedd0a0f9390f2823c9c923d371b 104 PIRSF PIRSF000077 1 104 4.2E-42 T 14-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 DB29_03584 69a4bedd0a0f9390f2823c9c923d371b 104 TIGRFAM TIGR01068 thioredoxin: thioredoxin 7 103 1.2E-39 T 14-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 DB29_03565 e30a5b43b0eecbc2b314ff4c4a195ef9 508 Pfam PF00474 Sodium:solute symporter family 33 432 6.1E-110 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 DB29_03565 e30a5b43b0eecbc2b314ff4c4a195ef9 508 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 33 432 8.8E-77 T 14-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 DB29_03565 e30a5b43b0eecbc2b314ff4c4a195ef9 508 Gene3D G3DSA:1.20.1730.10 21 500 6.3E-65 T 14-10-2018 IPR038377 Sodium/glucose symporter superfamily DB29_01576 b6a886b33f1c56445756665c2b090270 339 Pfam PF03786 D-mannonate dehydratase (UxuA) 151 332 4.5E-19 T 14-10-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 DB29_01576 b6a886b33f1c56445756665c2b090270 339 SUPERFAMILY SSF51658 16 300 4.82E-30 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily DB29_01576 b6a886b33f1c56445756665c2b090270 339 Gene3D G3DSA:3.20.20.150 14 338 6.1E-50 T 14-10-2018 DB29_00161 eefa1119d5b18d469fc47f3848dbcc0f 199 Pfam PF07670 Nucleoside recognition 43 150 3.6E-11 T 14-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 DB29_01610 d6a19ad8fb75e8224842aa754a0bff34 286 Pfam PF02311 AraC-like ligand binding domain 24 154 8.2E-14 T 14-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 DB29_01610 d6a19ad8fb75e8224842aa754a0bff34 286 SUPERFAMILY SSF46689 235 284 2.46E-12 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DB29_01610 d6a19ad8fb75e8224842aa754a0bff34 286 SMART SM00342 198 281 3.7E-27 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DB29_01610 d6a19ad8fb75e8224842aa754a0bff34 286 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 250 265 4.9E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DB29_01610 d6a19ad8fb75e8224842aa754a0bff34 286 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 265 281 4.9E-5 T 14-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 DB29_01610 d6a19ad8fb75e8224842aa754a0bff34 286 Gene3D G3DSA:1.10.10.60 232 285 1.3E-17 T 14-10-2018 DB29_01610 d6a19ad8fb75e8224842aa754a0bff34 286 Gene3D G3DSA:2.60.120.10 11 97 3.1E-13 T 14-10-2018 IPR014710 RmlC-like jelly roll fold DB29_01610 d6a19ad8fb75e8224842aa754a0bff34 286 Gene3D G3DSA:1.10.10.60 175 231 1.8E-16 T 14-10-2018 DB29_01610 d6a19ad8fb75e8224842aa754a0bff34 286 SUPERFAMILY SSF51182 25 177 5.16E-16 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily DB29_01610 d6a19ad8fb75e8224842aa754a0bff34 286 SUPERFAMILY SSF46689 183 232 1.84E-9 T 14-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 DB29_01610 d6a19ad8fb75e8224842aa754a0bff34 286 Pfam PF12833 Helix-turn-helix domain 204 282 8.8E-22 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DB29_03741 5c88fc5be607a0bfa59ff9b8eff26b57 124 Hamap MF_01861 UPF0738 protein . 2 124 25.124 T 14-10-2018 IPR020908 Uncharacterised protein family UPF0738 DB29_02988 c03f6394aed550001753d80ccec93135 338 Pfam PF00144 Beta-lactamase 18 324 2.2E-44 T 14-10-2018 IPR001466 Beta-lactamase-related DB29_02988 c03f6394aed550001753d80ccec93135 338 SUPERFAMILY SSF56601 2 333 8.53E-70 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like DB29_02988 c03f6394aed550001753d80ccec93135 338 Gene3D G3DSA:3.40.710.10 4 336 2.2E-101 T 14-10-2018 DB29_01834 a9d127bec01582e56bf3a83e0095581e 108 Gene3D G3DSA:3.30.70.100 10 101 4.9E-36 T 14-10-2018 DB29_01834 a9d127bec01582e56bf3a83e0095581e 108 SUPERFAMILY SSF54909 5 106 1.92E-30 T 14-10-2018 IPR011008 Dimeric alpha-beta barrel DB29_01834 a9d127bec01582e56bf3a83e0095581e 108 Pfam PF03992 Antibiotic biosynthesis monooxygenase 33 84 7.3E-5 T 14-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain DB29_01613 9c1fdc60758cbdb2d5d6653a08f6b40f 276 SUPERFAMILY SSF161098 7 276 3.79E-68 T 14-10-2018 IPR035906 MetI-like superfamily DB29_01613 9c1fdc60758cbdb2d5d6653a08f6b40f 276 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 87 269 2.2E-23 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DB29_01613 9c1fdc60758cbdb2d5d6653a08f6b40f 276 Gene3D G3DSA:1.10.3720.10 4 267 1.7E-61 T 14-10-2018 IPR035906 MetI-like superfamily DB29_01246 544a60d4411ae06ed2de313790d3902e 296 SUPERFAMILY SSF53474 2 288 3.78E-78 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DB29_01246 544a60d4411ae06ed2de313790d3902e 296 Pfam PF00561 alpha/beta hydrolase fold 28 275 2.2E-28 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DB29_01246 544a60d4411ae06ed2de313790d3902e 296 PRINTS PR00412 Epoxide hydrolase signature 33 51 5.0E-26 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 DB29_01246 544a60d4411ae06ed2de313790d3902e 296 PRINTS PR00412 Epoxide hydrolase signature 99 112 5.0E-26 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 DB29_01246 544a60d4411ae06ed2de313790d3902e 296 PRINTS PR00412 Epoxide hydrolase signature 113 126 5.0E-26 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 DB29_01246 544a60d4411ae06ed2de313790d3902e 296 PRINTS PR00412 Epoxide hydrolase signature 263 285 5.0E-26 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 DB29_01246 544a60d4411ae06ed2de313790d3902e 296 PRINTS PR00412 Epoxide hydrolase signature 53 68 5.0E-26 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 DB29_01246 544a60d4411ae06ed2de313790d3902e 296 PRINTS PR00412 Epoxide hydrolase signature 230 246 5.0E-26 T 14-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 DB29_01246 544a60d4411ae06ed2de313790d3902e 296 Gene3D G3DSA:3.40.50.1820 3 287 3.7E-85 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DB29_01246 544a60d4411ae06ed2de313790d3902e 296 PRINTS PR00111 Alpha/beta hydrolase fold signature 99 112 3.5E-9 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DB29_01246 544a60d4411ae06ed2de313790d3902e 296 PRINTS PR00111 Alpha/beta hydrolase fold signature 113 126 3.5E-9 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DB29_01246 544a60d4411ae06ed2de313790d3902e 296 PRINTS PR00111 Alpha/beta hydrolase fold signature 53 68 3.5E-9 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DB29_00760 9d6ef6551f5281afe2a78220a5337ea4 158 TIGRFAM TIGR00011 YbaK_EbsC: Cys-tRNA(Pro) deacylase 6 157 1.7E-50 T 14-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC DB29_00760 9d6ef6551f5281afe2a78220a5337ea4 158 Gene3D G3DSA:3.90.960.10 1 158 1.7E-45 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 DB29_00760 9d6ef6551f5281afe2a78220a5337ea4 158 PIRSF PIRSF006181 1 158 7.8E-62 T 14-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC DB29_00760 9d6ef6551f5281afe2a78220a5337ea4 158 SUPERFAMILY SSF55826 6 156 5.23E-37 T 14-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 DB29_00760 9d6ef6551f5281afe2a78220a5337ea4 158 Pfam PF04073 Aminoacyl-tRNA editing domain 35 147 1.8E-20 T 14-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 DB29_02055 788f8876c7481f2bf6960f047d0224f4 98 Pfam PF04025 Domain of unknown function (DUF370) 3 76 8.2E-8 T 14-10-2018 IPR007169 Extracellular matrix regulatory protein A DB29_01668 4fcec910533eaea4ccf9acc8df224af1 450 Gene3D G3DSA:3.40.190.10 169 442 5.9E-126 T 14-10-2018 DB29_01668 4fcec910533eaea4ccf9acc8df224af1 450 SUPERFAMILY SSF53850 32 444 1.2E-54 T 14-10-2018 DB29_01668 4fcec910533eaea4ccf9acc8df224af1 450 Pfam PF13416 Bacterial extracellular solute-binding protein 76 371 3.3E-23 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein DB29_01668 4fcec910533eaea4ccf9acc8df224af1 450 Gene3D G3DSA:3.40.190.10 59 395 5.9E-126 T 14-10-2018 DB29_02797 c2da8e4140b5f09ad20f2aa73a27a585 321 SUPERFAMILY SSF51658 1 310 9.12E-50 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily DB29_02797 c2da8e4140b5f09ad20f2aa73a27a585 321 Pfam PF07582 AP endonuclease family 2 C terminus 268 321 3.7E-21 T 14-10-2018 IPR011418 AP endonuclease, family 2, C-terminal DB29_02797 c2da8e4140b5f09ad20f2aa73a27a585 321 Gene3D G3DSA:3.20.20.150 2 314 2.0E-73 T 14-10-2018 DB29_02797 c2da8e4140b5f09ad20f2aa73a27a585 321 Pfam PF01261 Xylose isomerase-like TIM barrel 21 237 6.8E-32 T 14-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain DB29_02803 79f8793f5a6cf4c14856e456ea3896f6 169 Pfam PF07681 DoxX 15 112 1.5E-11 T 14-10-2018 IPR032808 DoxX family DB29_00299 e3d9f0ee57278975f3f06a3c47a12926 138 Gene3D G3DSA:3.30.1490.190 87 138 1.8E-13 T 14-10-2018 DB29_00299 e3d9f0ee57278975f3f06a3c47a12926 138 Gene3D G3DSA:1.10.10.10 1 83 2.5E-18 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_00299 e3d9f0ee57278975f3f06a3c47a12926 138 SUPERFAMILY SSF46785 6 134 8.39E-34 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_00299 e3d9f0ee57278975f3f06a3c47a12926 138 Pfam PF01475 Ferric uptake regulator family 12 130 8.2E-29 T 14-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 DB29_01566 622e117cf7a098fc9c5fe9abf329e10b 281 SUPERFAMILY SSF56601 15 243 6.98E-41 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like DB29_01566 622e117cf7a098fc9c5fe9abf329e10b 281 Pfam PF00144 Beta-lactamase 16 231 2.6E-25 T 14-10-2018 IPR001466 Beta-lactamase-related DB29_01566 622e117cf7a098fc9c5fe9abf329e10b 281 Gene3D G3DSA:3.40.710.10 11 262 5.8E-46 T 14-10-2018 DB29_00935 bbbde6b3c26787b6d5e3ceb5b8033b10 87 Pfam PF17279 Family of unknown function (DUF5344) 1 85 5.6E-18 T 14-10-2018 DB29_00906 ceeaaf44b08394a700d222a1805f7748 317 Pfam PF02653 Branched-chain amino acid transport system / permease component 9 289 4.4E-36 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 DB29_00599 13430e5a6e6a30c74b10777e14a07c69 364 Pfam PF12698 ABC-2 family transporter protein 19 355 1.0E-27 T 14-10-2018 DB29_02768 8e87163526429b1eb171eab7c6f304ba 251 SMART SM00382 32 220 9.6E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_02768 8e87163526429b1eb171eab7c6f304ba 251 SUPERFAMILY SSF52540 3 225 7.84E-67 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_02768 8e87163526429b1eb171eab7c6f304ba 251 Pfam PF00005 ABC transporter 23 171 1.0E-31 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB29_02768 8e87163526429b1eb171eab7c6f304ba 251 Gene3D G3DSA:3.40.50.300 1 246 1.7E-65 T 14-10-2018 DB29_00636 163126f474daacdcb9322578651273e3 359 Gene3D G3DSA:3.90.1200.10 132 323 1.3E-15 T 14-10-2018 DB29_00636 163126f474daacdcb9322578651273e3 359 SUPERFAMILY SSF56112 19 302 7.73E-35 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily DB29_00636 163126f474daacdcb9322578651273e3 359 Pfam PF01636 Phosphotransferase enzyme family 38 271 8.5E-19 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase DB29_01386 3c4283151799457b5f74596b0b27d954 437 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 13 420 7.5E-132 T 14-10-2018 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 DB29_01386 3c4283151799457b5f74596b0b27d954 437 Pfam PF02378 Phosphotransferase system, EIIC 29 349 8.9E-59 T 14-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 DB29_01386 3c4283151799457b5f74596b0b27d954 437 PIRSF PIRSF006351 1 430 7.0E-140 T 14-10-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 DB29_01386 3c4283151799457b5f74596b0b27d954 437 TIGRFAM TIGR00359 cello_pts_IIC: PTS system, cellobiose-specific IIC component 13 420 7.5E-132 T 14-10-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 DB29_04094 7114a4efd8e34fd1194a72cb42fa27b2 256 Gene3D G3DSA:3.40.50.150 71 252 2.9E-34 T 14-10-2018 DB29_04094 7114a4efd8e34fd1194a72cb42fa27b2 256 Pfam PF04445 Putative SAM-dependent methyltransferase 85 227 4.7E-12 T 14-10-2018 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 DB29_04094 7114a4efd8e34fd1194a72cb42fa27b2 256 SUPERFAMILY SSF53335 2 253 2.96E-45 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DB29_03203 71f691406004eef3fcbf366b6d464e92 298 Gene3D G3DSA:1.10.3720.10 84 293 1.4E-22 T 14-10-2018 IPR035906 MetI-like superfamily DB29_03203 71f691406004eef3fcbf366b6d464e92 298 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 110 289 6.4E-29 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DB29_03203 71f691406004eef3fcbf366b6d464e92 298 SUPERFAMILY SSF161098 87 279 8.9E-25 T 14-10-2018 IPR035906 MetI-like superfamily DB29_01199 3dcb10deb8ad2ef49668aa9f39191a9a 193 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 2 175 2.5E-31 T 14-10-2018 IPR003740 Uncharacterised membrane protein YitT DB29_00992 1928d68daf0d24d657c86f9a0a5ebba9 250 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 14-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 DB29_00992 1928d68daf0d24d657c86f9a0a5ebba9 250 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 247 5.8E-59 T 14-10-2018 DB29_00992 1928d68daf0d24d657c86f9a0a5ebba9 250 Gene3D G3DSA:3.40.50.720 1 249 7.1E-77 T 14-10-2018 DB29_00992 1928d68daf0d24d657c86f9a0a5ebba9 250 SUPERFAMILY SSF51735 3 248 3.14E-75 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_00992 1928d68daf0d24d657c86f9a0a5ebba9 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 1.2E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_00992 1928d68daf0d24d657c86f9a0a5ebba9 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 1.2E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_00992 1928d68daf0d24d657c86f9a0a5ebba9 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 1.2E-13 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_00992 1928d68daf0d24d657c86f9a0a5ebba9 250 TIGRFAM TIGR01832 kduD: 2-deoxy-D-gluconate 3-dehydrogenase 4 249 1.2E-113 T 14-10-2018 IPR011286 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase GO:0008678|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.127|MetaCyc: PWY-6507|MetaCyc: PWY-7562 DB29_00992 1928d68daf0d24d657c86f9a0a5ebba9 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 2.9E-42 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_00992 1928d68daf0d24d657c86f9a0a5ebba9 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 2.9E-42 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_00992 1928d68daf0d24d657c86f9a0a5ebba9 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 10 27 2.9E-42 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_00992 1928d68daf0d24d657c86f9a0a5ebba9 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 2.9E-42 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_00992 1928d68daf0d24d657c86f9a0a5ebba9 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 2.9E-42 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_00992 1928d68daf0d24d657c86f9a0a5ebba9 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 211 231 2.9E-42 T 14-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR DB29_01239 26810e618172627050b9a49177bc9bc7 275 Gene3D G3DSA:3.40.250.10 149 274 2.4E-40 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily DB29_01239 26810e618172627050b9a49177bc9bc7 275 SUPERFAMILY SSF52821 2 149 4.71E-40 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily DB29_01239 26810e618172627050b9a49177bc9bc7 275 Pfam PF00581 Rhodanese-like domain 4 124 3.6E-17 T 14-10-2018 IPR001763 Rhodanese-like domain DB29_01239 26810e618172627050b9a49177bc9bc7 275 Pfam PF00581 Rhodanese-like domain 152 262 2.0E-15 T 14-10-2018 IPR001763 Rhodanese-like domain DB29_01239 26810e618172627050b9a49177bc9bc7 275 SUPERFAMILY SSF52821 148 273 3.4E-38 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily DB29_01239 26810e618172627050b9a49177bc9bc7 275 ProSitePatterns PS00380 Rhodanese signature 1. 34 45 - T 14-10-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350|MetaCyc: PWY-7927|Reactome: R-HSA-1614558 DB29_01239 26810e618172627050b9a49177bc9bc7 275 Gene3D G3DSA:3.40.250.10 1 146 6.1E-47 T 14-10-2018 IPR036873 Rhodanese-like domain superfamily DB29_01239 26810e618172627050b9a49177bc9bc7 275 SMART SM00450 149 266 2.3E-18 T 14-10-2018 IPR001763 Rhodanese-like domain DB29_01239 26810e618172627050b9a49177bc9bc7 275 SMART SM00450 1 128 1.3E-17 T 14-10-2018 IPR001763 Rhodanese-like domain DB29_02517 62a300c203c0da13687c675fbeb4ee30 386 Pfam PF13439 Glycosyltransferase Family 4 15 183 7.6E-16 T 14-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 DB29_02517 62a300c203c0da13687c675fbeb4ee30 386 SUPERFAMILY SSF53756 12 386 2.37E-72 T 14-10-2018 DB29_02517 62a300c203c0da13687c675fbeb4ee30 386 Gene3D G3DSA:3.40.50.2000 180 369 3.2E-64 T 14-10-2018 DB29_02517 62a300c203c0da13687c675fbeb4ee30 386 Pfam PF00534 Glycosyl transferases group 1 195 363 4.7E-32 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 DB29_02517 62a300c203c0da13687c675fbeb4ee30 386 Gene3D G3DSA:3.40.50.2000 74 382 3.2E-64 T 14-10-2018 DB29_02015 0244ee7b590b0c22049e0cbf8708fec2 381 Gene3D G3DSA:1.20.1090.10 185 380 2.1E-65 T 14-10-2018 DB29_02015 0244ee7b590b0c22049e0cbf8708fec2 381 Pfam PF00465 Iron-containing alcohol dehydrogenase 10 373 2.8E-117 T 14-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 DB29_02015 0244ee7b590b0c22049e0cbf8708fec2 381 SUPERFAMILY SSF56796 4 379 1.83E-118 T 14-10-2018 DB29_02015 0244ee7b590b0c22049e0cbf8708fec2 381 Gene3D G3DSA:3.40.50.1970 2 181 8.4E-56 T 14-10-2018 DB29_03443 209b11d24dfc33b8ee29dff8998c76d3 422 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 6 414 6.7E-141 T 14-10-2018 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like DB29_03443 209b11d24dfc33b8ee29dff8998c76d3 422 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 4.6E-7 T 14-10-2018 DB29_03443 209b11d24dfc33b8ee29dff8998c76d3 422 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 157 175 4.6E-7 T 14-10-2018 DB29_03443 209b11d24dfc33b8ee29dff8998c76d3 422 Gene3D G3DSA:1.10.8.260 280 344 3.1E-120 T 14-10-2018 IPR023166 HI0933-like insert domain superfamily DB29_03443 209b11d24dfc33b8ee29dff8998c76d3 422 SUPERFAMILY SSF51905 3 417 4.18E-61 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB29_03443 209b11d24dfc33b8ee29dff8998c76d3 422 SUPERFAMILY SSF160996 194 362 5.75E-44 T 14-10-2018 DB29_03443 209b11d24dfc33b8ee29dff8998c76d3 422 Gene3D G3DSA:2.40.30.10 193 361 3.1E-120 T 14-10-2018 DB29_03443 209b11d24dfc33b8ee29dff8998c76d3 422 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 6.8E-10 T 14-10-2018 DB29_03443 209b11d24dfc33b8ee29dff8998c76d3 422 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 160 169 6.8E-10 T 14-10-2018 DB29_03443 209b11d24dfc33b8ee29dff8998c76d3 422 Pfam PF03486 HI0933-like protein 4 414 1.9E-149 T 14-10-2018 DB29_03443 209b11d24dfc33b8ee29dff8998c76d3 422 Gene3D G3DSA:3.50.50.60 7 410 3.1E-120 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB29_04004 1b2ccc9388da71479461f68d11ee1b60 259 Pfam PF08222 CodY helix-turn-helix domain 198 257 2.9E-37 T 14-10-2018 IPR013198 GTP-sensing helix-turn-helix, CodY, C-terminal DB29_04004 1b2ccc9388da71479461f68d11ee1b60 259 Gene3D G3DSA:3.30.450.40 1 159 3.3E-68 T 14-10-2018 IPR029016 GAF-like domain superfamily DB29_04004 1b2ccc9388da71479461f68d11ee1b60 259 PIRSF PIRSF011572 1 257 7.5E-127 T 14-10-2018 IPR014154 GTP-sensing transcriptional pleiotropic repressor CodY GO:0003677|GO:0003700|GO:0005525|GO:0045892 DB29_04004 1b2ccc9388da71479461f68d11ee1b60 259 Gene3D G3DSA:1.10.10.10 160 259 2.3E-47 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_04004 1b2ccc9388da71479461f68d11ee1b60 259 Hamap MF_00621 GTP-sensing transcriptional pleiotropic repressor CodY [codY]. 1 259 147.243 T 14-10-2018 IPR014154 GTP-sensing transcriptional pleiotropic repressor CodY GO:0003677|GO:0003700|GO:0005525|GO:0045892 DB29_04004 1b2ccc9388da71479461f68d11ee1b60 259 TIGRFAM TIGR02787 codY_Gpos: GTP-sensing transcriptional pleiotropic repressor CodY 3 253 3.7E-124 T 14-10-2018 IPR014154 GTP-sensing transcriptional pleiotropic repressor CodY GO:0003677|GO:0003700|GO:0005525|GO:0045892 DB29_04004 1b2ccc9388da71479461f68d11ee1b60 259 SUPERFAMILY SSF46785 167 256 2.57E-42 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_04004 1b2ccc9388da71479461f68d11ee1b60 259 Pfam PF06018 CodY GAF-like domain 3 178 2.3E-79 T 14-10-2018 IPR010312 GTP-sensing transcriptional pleiotropic repressor CodY, N-terminal GO:0003677|GO:0005525 DB29_01692 288480d1726b0e51f69c1aa8b6eaa162 292 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 88 285 3.1E-14 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DB29_01692 288480d1726b0e51f69c1aa8b6eaa162 292 SUPERFAMILY SSF161098 7 292 6.28E-61 T 14-10-2018 IPR035906 MetI-like superfamily DB29_01692 288480d1726b0e51f69c1aa8b6eaa162 292 Gene3D G3DSA:1.10.3720.10 1 283 4.5E-75 T 14-10-2018 IPR035906 MetI-like superfamily DB29_00076 031f54d40d3b2d7a43f19297162230ad 223 Gene3D G3DSA:1.20.810.10 1 223 1.8E-86 T 14-10-2018 IPR027387 Cytochrome b/b6-like domain superfamily Reactome: R-HSA-611105 DB29_00076 031f54d40d3b2d7a43f19297162230ad 223 PIRSF PIRSF000032 2 223 4.7E-98 T 14-10-2018 DB29_00076 031f54d40d3b2d7a43f19297162230ad 223 SUPERFAMILY SSF81342 6 223 7.69E-63 T 14-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 DB29_00076 031f54d40d3b2d7a43f19297162230ad 223 Pfam PF00033 Cytochrome b/b6/petB 39 218 5.8E-51 T 14-10-2018 IPR005797 Cytochrome b/b6, N-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 DB29_00106 a2e01cf7c7fd571e8deec216a26711bb 88 Pfam PF14069 Stage VI sporulation protein F 9 80 6.4E-30 T 14-10-2018 IPR025942 Stage VI sporulation protein F DB29_02043 94fb53bd2e0f28c0056a0e98edc62638 562 Pfam PF13556 PucR C-terminal helix-turn-helix domain 492 550 3.1E-15 T 14-10-2018 IPR025736 PucR C-terminal helix-turn-helix domain DB29_02043 94fb53bd2e0f28c0056a0e98edc62638 562 Pfam PF07905 Purine catabolism regulatory protein-like family 8 125 5.3E-25 T 14-10-2018 IPR012914 Purine catabolism PurC-like domain DB29_02043 94fb53bd2e0f28c0056a0e98edc62638 562 Gene3D G3DSA:1.10.10.2840 424 555 2.7E-16 T 14-10-2018 DB29_01520 61abc51ad6565f5f16ab67b6b3eacdb1 420 Gene3D G3DSA:3.40.50.300 181 333 3.5E-41 T 14-10-2018 DB29_01520 61abc51ad6565f5f16ab67b6b3eacdb1 420 SUPERFAMILY SSF52540 177 382 5.29E-40 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_01520 61abc51ad6565f5f16ab67b6b3eacdb1 420 SMART SM00382 215 335 1.8E-8 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_01520 61abc51ad6565f5f16ab67b6b3eacdb1 420 Gene3D G3DSA:1.10.8.60 334 386 3.5E-41 T 14-10-2018 DB29_01520 61abc51ad6565f5f16ab67b6b3eacdb1 420 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 219 332 5.7E-23 T 14-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 DB29_03840 4c6a1274184cd1bcb878822c19b86d25 81 Hamap MF_00506 UPF0180 protein . 1 78 26.005 T 14-10-2018 IPR005370 Uncharacterised protein family UPF0180 DB29_03840 4c6a1274184cd1bcb878822c19b86d25 81 Pfam PF03698 Uncharacterised protein family (UPF0180) 3 76 1.5E-24 T 14-10-2018 IPR005370 Uncharacterised protein family UPF0180 DB29_03840 4c6a1274184cd1bcb878822c19b86d25 81 ProDom PD059670 UPF0180 YKUS BA1413/GBAA1413/BAS1304 YKUS-LIKE BT9727_1277 BCE1513 GK1051 BH2667 ABC2430 BCE33L1278 1 47 3.0E-20 T 14-10-2018 IPR005370 Uncharacterised protein family UPF0180 DB29_02653 926362b5888ff29d1af6146098a13898 448 PIRSF PIRSF006304 1 448 6.5E-169 T 14-10-2018 IPR013853 Galactitol permease IIC component GO:0015577|GO:0015796 DB29_02653 926362b5888ff29d1af6146098a13898 448 TIGRFAM TIGR00827 EIIC-GAT: PTS system, galactitol-specific IIC component 7 408 6.5E-165 T 14-10-2018 IPR013853 Galactitol permease IIC component GO:0015577|GO:0015796 DB29_02653 926362b5888ff29d1af6146098a13898 448 Pfam PF03611 PTS system sugar-specific permease component 6 383 1.6E-82 T 14-10-2018 IPR004703 Phosphotransferase system, sugar-specific permease component GO:0009401|GO:0016021 DB29_01068 9e842284e81449399ffb2d479af5681e 190 Pfam PF00881 Nitroreductase family 13 168 8.6E-28 T 14-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 DB29_01068 9e842284e81449399ffb2d479af5681e 190 SUPERFAMILY SSF55469 8 181 1.83E-38 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 DB29_01068 9e842284e81449399ffb2d479af5681e 190 PIRSF PIRSF000232 4 190 8.6E-57 T 14-10-2018 IPR026021 Putative NAD(P)H nitroreductase YdjA-like DB29_01068 9e842284e81449399ffb2d479af5681e 190 Gene3D G3DSA:3.40.109.10 3 190 6.2E-46 T 14-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 DB29_01083 97904259f043a1f01ad55e965a66d08b 141 TIGRFAM TIGR01637 phage_arpU: phage transcriptional regulator, ArpU family 6 131 1.4E-28 T 14-10-2018 IPR006524 Transcription activator, ArpU family DB29_02505 aee762317a35432f212344240e2f0d64 367 TIGRFAM TIGR00912 2A0309: spore germination protein (amino acid permease) 12 366 2.3E-59 T 14-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 DB29_02505 aee762317a35432f212344240e2f0d64 367 Pfam PF03845 Spore germination protein 12 329 3.7E-64 T 14-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 DB29_02505 aee762317a35432f212344240e2f0d64 367 Gene3D G3DSA:1.10.4160.10 6 360 1.8E-8 T 14-10-2018 IPR038271 Purine-cytosine permease superfamily DB29_03243 747f4fd9cf3a86ceff8e5cc2354afe93 317 Pfam PF07670 Nucleoside recognition 16 98 1.1E-7 T 14-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 DB29_00003 c5face3cf56570b0bfff7f4d476ac39e 151 Pfam PF06713 Bacterial PH domain 66 143 1.8E-17 T 14-10-2018 IPR009589 Sublancin immunity protein SunI GO:0030153 DB29_01188 c20b47333de602419c23ca03a1ae882a 109 TIGRFAM TIGR00377 ant_ant_sig: anti-anti-sigma factor 1 103 7.3E-30 T 14-10-2018 IPR003658 Anti-sigma factor antagonist GO:0006355|GO:0045152 DB29_01188 c20b47333de602419c23ca03a1ae882a 109 Pfam PF01740 STAS domain 7 101 1.6E-15 T 14-10-2018 IPR002645 STAS domain DB29_01188 c20b47333de602419c23ca03a1ae882a 109 SUPERFAMILY SSF52091 3 101 1.1E-24 T 14-10-2018 IPR036513 STAS domain superfamily DB29_01188 c20b47333de602419c23ca03a1ae882a 109 Gene3D G3DSA:3.30.750.24 3 108 1.0E-26 T 14-10-2018 IPR036513 STAS domain superfamily DB29_00360 2648aa5c08e191ef8536378681c5ac54 213 TIGRFAM TIGR02571 ComEB: ComE operon protein 2 19 166 1.4E-79 T 14-10-2018 IPR013404 Competence operon E, ComEB DB29_00360 2648aa5c08e191ef8536378681c5ac54 213 SUPERFAMILY SSF53927 24 156 1.41E-38 T 14-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 DB29_00360 2648aa5c08e191ef8536378681c5ac54 213 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 22 133 1.2E-26 T 14-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain DB29_00360 2648aa5c08e191ef8536378681c5ac54 213 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 87 122 - T 14-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 DB29_00360 2648aa5c08e191ef8536378681c5ac54 213 Gene3D G3DSA:3.40.140.10 19 166 6.9E-47 T 14-10-2018 DB29_02590 e69292e5b3aa787c2a962a7e4f9195d1 113 Gene3D G3DSA:1.10.10.10 1 113 8.9E-35 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_02590 e69292e5b3aa787c2a962a7e4f9195d1 113 SUPERFAMILY SSF46785 3 106 1.44E-29 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_02590 e69292e5b3aa787c2a962a7e4f9195d1 113 Pfam PF01638 HxlR-like helix-turn-helix 19 103 2.5E-29 T 14-10-2018 IPR002577 Helix-turn-helix, HxlR type DB29_02801 ff83a79b4781c60d2c2d3e3067ce61b0 126 SUPERFAMILY SSF54593 6 110 1.65E-13 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DB29_02801 ff83a79b4781c60d2c2d3e3067ce61b0 126 Gene3D G3DSA:3.10.180.10 1 114 4.5E-13 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DB29_0P0036 83e04d90f5554b7f70b37773a1aee7cc 337 Gene3D G3DSA:3.10.450.540 229 336 5.4E-9 T 14-10-2018 DB29_0P0036 83e04d90f5554b7f70b37773a1aee7cc 337 Pfam PF12642 Conjugative transposon protein TcpC 68 331 8.5E-41 T 14-10-2018 IPR024735 Conjugative transposon protein TcpC DB29_02214 4bef7c3a0d37115bbb4d66c3bb2a7d1e 308 Pfam PF10026 Predicted Zn-dependent protease (DUF2268) 86 293 1.3E-63 T 14-10-2018 IPR018728 Domain of unknown function DUF2268 DB29_03056 80d4a02c9f1bf08d7a5427e73006fa98 598 SUPERFAMILY SSF53187 55 593 1.98E-28 T 14-10-2018 DB29_03056 80d4a02c9f1bf08d7a5427e73006fa98 598 Pfam PF01546 Peptidase family M20/M25/M40 151 516 5.1E-11 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 DB29_03056 80d4a02c9f1bf08d7a5427e73006fa98 598 Gene3D G3DSA:3.40.630.10 54 307 8.8E-32 T 14-10-2018 DB29_04325 fdbda5c6139f8b09c115d5bbeb549670 489 Pfam PF03703 Bacterial PH domain 412 483 6.7E-5 T 14-10-2018 IPR005182 Domain of unknown function DUF304 DB29_04325 fdbda5c6139f8b09c115d5bbeb549670 489 Pfam PF03703 Bacterial PH domain 261 333 3.1E-10 T 14-10-2018 IPR005182 Domain of unknown function DUF304 DB29_04325 fdbda5c6139f8b09c115d5bbeb549670 489 Pfam PF03703 Bacterial PH domain 59 134 6.6E-17 T 14-10-2018 IPR005182 Domain of unknown function DUF304 DB29_04325 fdbda5c6139f8b09c115d5bbeb549670 489 PIRSF PIRSF026631 1 489 8.6E-111 T 14-10-2018 IPR014529 Uncharacterised conserved protein UCP026631 DB29_01749 242bdd3345e352978909242af00ec122 300 Gene3D G3DSA:1.10.3720.10 54 294 1.3E-77 T 14-10-2018 IPR035906 MetI-like superfamily DB29_01749 242bdd3345e352978909242af00ec122 300 SUPERFAMILY SSF161098 58 285 3.79E-64 T 14-10-2018 IPR035906 MetI-like superfamily DB29_01749 242bdd3345e352978909242af00ec122 300 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 89 286 3.4E-18 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DB29_02521 d97c3d04982f72e5de4e059bff74f1bd 181 TIGRFAM TIGR01221 rmlC: dTDP-4-dehydrorhamnose 3,5-epimerase 4 177 1.3E-70 T 14-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 DB29_02521 d97c3d04982f72e5de4e059bff74f1bd 181 Gene3D G3DSA:2.60.120.10 1 181 5.1E-72 T 14-10-2018 IPR014710 RmlC-like jelly roll fold DB29_02521 d97c3d04982f72e5de4e059bff74f1bd 181 ProDom PD001462 35-EPIMERASE DTDP-4-DEHYDRORHAMNOSE ISOMERASE RMLC EPIMERASE RELATED DTDP-6-DEOXY-D-GLUCOSE-35-EPIMERASE DTDP-4-KETO-6-DEOXY-D-GLUCOSE DTDP-4-KETO-6-DEOXYGLUCOSE-35-EPIMERASE DTDP-L-RHAMNOSE 1 177 1.0E-101 T 14-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 DB29_02521 d97c3d04982f72e5de4e059bff74f1bd 181 Pfam PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase 5 175 1.7E-71 T 14-10-2018 IPR000888 dTDP-4-dehydrorhamnose 3,5-epimerase-related GO:0008830 DB29_02521 d97c3d04982f72e5de4e059bff74f1bd 181 SUPERFAMILY SSF51182 1 180 8.5E-74 T 14-10-2018 IPR011051 RmlC-like cupin domain superfamily DB29_02533 30a05ff070a61a2dacc9d9a9c22b12d1 127 Pfam PF16888 Domain of unknown function (DUF5082) 3 110 1.6E-16 T 14-10-2018 IPR031681 Protein of unknown function DUF5082 DB29_02533 30a05ff070a61a2dacc9d9a9c22b12d1 127 ProDom PD338809 BH2346 YXIB BH4015 BH0976 PREFOLDIN 15 104 2.0E-8 T 14-10-2018 DB29_02580 b0e06dacacb00545dcf0663f5b9848ae 234 Pfam PF12730 ABC-2 family transporter protein 4 188 4.6E-11 T 14-10-2018 IPR032688 ABC-2 family transporter protein GO:0055085 DB29_00309 0d058322ba3a5848886ed8d26a5dcbf6 314 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 3 286 3.7E-92 T 14-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 DB29_00309 0d058322ba3a5848886ed8d26a5dcbf6 314 Gene3D G3DSA:3.40.1010.20 7 283 5.8E-94 T 14-10-2018 DB29_00309 0d058322ba3a5848886ed8d26a5dcbf6 314 Gene3D G3DSA:3.40.1010.20 104 197 5.8E-94 T 14-10-2018 DB29_00309 0d058322ba3a5848886ed8d26a5dcbf6 314 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 1 288 31.781 T 14-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 DB29_00309 0d058322ba3a5848886ed8d26a5dcbf6 314 Pfam PF02401 LytB protein 5 284 7.3E-82 T 14-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 DB29_00309 0d058322ba3a5848886ed8d26a5dcbf6 314 Gene3D G3DSA:3.40.50.11270 12 103 5.8E-94 T 14-10-2018 DB29_02735 7b00dcf83bffc615cc4e5fab5103249a 285 Pfam PF00005 ABC transporter 21 160 5.1E-23 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB29_02735 7b00dcf83bffc615cc4e5fab5103249a 285 SMART SM00382 30 209 3.5E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_02735 7b00dcf83bffc615cc4e5fab5103249a 285 Gene3D G3DSA:3.40.50.300 2 271 2.0E-47 T 14-10-2018 DB29_02735 7b00dcf83bffc615cc4e5fab5103249a 285 SUPERFAMILY SSF52540 3 225 5.6E-46 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_00989 2cd3cf171aade0fd76293bd1be223e7c 208 Pfam PF13302 Acetyltransferase (GNAT) domain 16 158 3.2E-27 T 14-10-2018 IPR000182 GNAT domain DB29_00989 2cd3cf171aade0fd76293bd1be223e7c 208 Gene3D G3DSA:3.40.630.30 2 184 1.9E-42 T 14-10-2018 DB29_00989 2cd3cf171aade0fd76293bd1be223e7c 208 SUPERFAMILY SSF55729 10 182 2.81E-40 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase DB29_01684 4c57422de844d65e1f2cf8dba2c712f9 125 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 4 122 1.4E-13 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain DB29_01684 4c57422de844d65e1f2cf8dba2c712f9 125 Gene3D G3DSA:3.10.180.10 1 125 3.3E-32 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DB29_01684 4c57422de844d65e1f2cf8dba2c712f9 125 SUPERFAMILY SSF54593 1 124 1.48E-24 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DB29_02541 400bdf3978d79dda859142463cc74d10 502 PIRSF PIRSF026631 1 501 9.7E-83 T 14-10-2018 IPR014529 Uncharacterised conserved protein UCP026631 DB29_02541 400bdf3978d79dda859142463cc74d10 502 Pfam PF03703 Bacterial PH domain 266 338 2.3E-9 T 14-10-2018 IPR005182 Domain of unknown function DUF304 DB29_02541 400bdf3978d79dda859142463cc74d10 502 Pfam PF03703 Bacterial PH domain 414 491 2.7E-10 T 14-10-2018 IPR005182 Domain of unknown function DUF304 DB29_02541 400bdf3978d79dda859142463cc74d10 502 Pfam PF03703 Bacterial PH domain 64 144 6.5E-13 T 14-10-2018 IPR005182 Domain of unknown function DUF304 DB29_00676 22fe655049a248050b8e5d214b98a599 52 Pfam PF14139 YpzG-like protein 1 52 1.5E-26 T 14-10-2018 IPR025413 YpzG-like protein DB29_02789 9cd0f0cfb728f194d295c337ffd9f2b4 325 SUPERFAMILY SSF53807 44 312 1.57E-50 T 14-10-2018 DB29_02789 9cd0f0cfb728f194d295c337ffd9f2b4 325 Pfam PF01497 Periplasmic binding protein 75 293 6.4E-29 T 14-10-2018 IPR002491 ABC transporter periplasmic binding domain DB29_02789 9cd0f0cfb728f194d295c337ffd9f2b4 325 Gene3D G3DSA:3.40.50.1980 155 321 3.9E-51 T 14-10-2018 DB29_02789 9cd0f0cfb728f194d295c337ffd9f2b4 325 Gene3D G3DSA:3.40.50.1980 32 154 1.0E-24 T 14-10-2018 DB29_03885 be53cd3b32f54f19ccea3813ad8eb678 117 Pfam PF08868 YugN-like family 6 95 1.4E-15 T 14-10-2018 IPR014967 Uncharacterised protein family, YugN-like DB29_03885 be53cd3b32f54f19ccea3813ad8eb678 117 Gene3D G3DSA:3.30.310.100 1 117 7.3E-49 T 14-10-2018 IPR036491 YugN-like superfamily DB29_03885 be53cd3b32f54f19ccea3813ad8eb678 117 SUPERFAMILY SSF160755 2 113 3.53E-39 T 14-10-2018 IPR036491 YugN-like superfamily DB29_00573 4be168355bc2e5721692eb1a48dbb32e 126 SUPERFAMILY SSF46785 6 86 1.54E-18 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_00573 4be168355bc2e5721692eb1a48dbb32e 126 SMART SM00345 17 76 1.1E-13 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DB29_00573 4be168355bc2e5721692eb1a48dbb32e 126 Gene3D G3DSA:1.10.10.10 11 125 3.6E-24 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_00573 4be168355bc2e5721692eb1a48dbb32e 126 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 76 3.7E-14 T 14-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 DB29_00157 1f996b5649a7a6a6e38e3489c824f871 544 Pfam PF05140 ResB-like family 66 427 5.1E-71 T 14-10-2018 IPR007816 ResB-like domain DB29_00157 1f996b5649a7a6a6e38e3489c824f871 544 Pfam PF05140 ResB-like family 440 518 1.0E-16 T 14-10-2018 IPR007816 ResB-like domain DB29_01424 f293e30bac68c113864318a3020c429d 283 Gene3D G3DSA:1.10.1200.110 248 283 2.4E-6 T 14-10-2018 DB29_01424 f293e30bac68c113864318a3020c429d 283 Pfam PF03629 Carbohydrate esterase, sialic acid-specific acetylesterase 4 224 1.3E-52 T 14-10-2018 IPR005181 Sialate O-acetylesterase domain DB29_01424 f293e30bac68c113864318a3020c429d 283 Gene3D G3DSA:3.40.50.1110 1 247 8.2E-83 T 14-10-2018 IPR036514 SGNH hydrolase superfamily DB29_01424 f293e30bac68c113864318a3020c429d 283 SUPERFAMILY SSF52266 2 276 1.2E-75 T 14-10-2018 DB29_01488 de2725a0990c907f58ca7de889350c30 277 Gene3D G3DSA:3.20.20.70 1 272 8.9E-94 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DB29_01488 de2725a0990c907f58ca7de889350c30 277 Pfam PF00682 HMGL-like 1 254 9.1E-40 T 14-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 DB29_01488 de2725a0990c907f58ca7de889350c30 277 SUPERFAMILY SSF51569 1 271 1.28E-59 T 14-10-2018 DB29_03767 d7cb32e3ed9a2b1a80ef54807291adc3 209 Gene3D G3DSA:3.60.15.10 1 208 1.2E-67 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DB29_03767 d7cb32e3ed9a2b1a80ef54807291adc3 209 Pfam PF00753 Metallo-beta-lactamase superfamily 8 190 1.9E-35 T 14-10-2018 IPR001279 Metallo-beta-lactamase DB29_03767 d7cb32e3ed9a2b1a80ef54807291adc3 209 SUPERFAMILY SSF56281 6 200 3.93E-57 T 14-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like DB29_03767 d7cb32e3ed9a2b1a80ef54807291adc3 209 SMART SM00849 11 190 5.8E-49 T 14-10-2018 IPR001279 Metallo-beta-lactamase DB29_03880 887a51ebc78bf7c752928081dd87bd28 624 Gene3D G3DSA:1.20.210.10 2 527 1.9E-205 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DB29_03880 887a51ebc78bf7c752928081dd87bd28 624 TIGRFAM TIGR02891 CtaD_CoxA: cytochrome c oxidase, subunit I 14 519 4.9E-205 T 14-10-2018 IPR014241 Cytochrome c oxidase, subunit I bacterial type GO:0004129|GO:0005886|GO:0015990|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 DB29_03880 887a51ebc78bf7c752928081dd87bd28 624 SUPERFAMILY SSF81442 10 520 1.83E-180 T 14-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DB29_03880 887a51ebc78bf7c752928081dd87bd28 624 PRINTS PR01165 Cytochrome c oxidase subunit I signature 188 207 5.8E-103 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DB29_03880 887a51ebc78bf7c752928081dd87bd28 624 PRINTS PR01165 Cytochrome c oxidase subunit I signature 309 330 5.8E-103 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DB29_03880 887a51ebc78bf7c752928081dd87bd28 624 PRINTS PR01165 Cytochrome c oxidase subunit I signature 344 362 5.8E-103 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DB29_03880 887a51ebc78bf7c752928081dd87bd28 624 PRINTS PR01165 Cytochrome c oxidase subunit I signature 422 443 5.8E-103 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DB29_03880 887a51ebc78bf7c752928081dd87bd28 624 PRINTS PR01165 Cytochrome c oxidase subunit I signature 87 111 5.8E-103 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DB29_03880 887a51ebc78bf7c752928081dd87bd28 624 PRINTS PR01165 Cytochrome c oxidase subunit I signature 13 38 5.8E-103 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DB29_03880 887a51ebc78bf7c752928081dd87bd28 624 PRINTS PR01165 Cytochrome c oxidase subunit I signature 129 141 5.8E-103 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DB29_03880 887a51ebc78bf7c752928081dd87bd28 624 PRINTS PR01165 Cytochrome c oxidase subunit I signature 239 260 5.8E-103 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DB29_03880 887a51ebc78bf7c752928081dd87bd28 624 PRINTS PR01165 Cytochrome c oxidase subunit I signature 285 300 5.8E-103 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DB29_03880 887a51ebc78bf7c752928081dd87bd28 624 PRINTS PR01165 Cytochrome c oxidase subunit I signature 60 83 5.8E-103 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DB29_03880 887a51ebc78bf7c752928081dd87bd28 624 PRINTS PR01165 Cytochrome c oxidase subunit I signature 159 177 5.8E-103 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DB29_03880 887a51ebc78bf7c752928081dd87bd28 624 PRINTS PR01165 Cytochrome c oxidase subunit I signature 372 391 5.8E-103 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DB29_03880 887a51ebc78bf7c752928081dd87bd28 624 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 241 295 - T 14-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DB29_03880 887a51ebc78bf7c752928081dd87bd28 624 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 22 465 5.2E-146 T 14-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 DB29_00883 f47067a874eab28dade2ff02ecc83e6a 290 SUPERFAMILY SSF56529 66 286 5.49E-32 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 DB29_00883 f47067a874eab28dade2ff02ecc83e6a 290 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 124 285 4.0E-18 T 14-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 DB29_00883 f47067a874eab28dade2ff02ecc83e6a 290 Gene3D G3DSA:3.90.850.10 69 289 7.3E-66 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 DB29_01336 778198111763ca9ede64ec87e643549c 294 Gene3D G3DSA:1.10.3720.10 15 285 9.1E-66 T 14-10-2018 IPR035906 MetI-like superfamily DB29_01336 778198111763ca9ede64ec87e643549c 294 SUPERFAMILY SSF161098 25 294 2.71E-75 T 14-10-2018 IPR035906 MetI-like superfamily DB29_01336 778198111763ca9ede64ec87e643549c 294 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 111 283 1.4E-16 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DB29_02452 bed88180167ec2f515851381375dfcf2 134 PRINTS PR00332 Histidine triad family signature 87 97 7.8E-13 T 14-10-2018 IPR001310 Histidine triad (HIT) protein DB29_02452 bed88180167ec2f515851381375dfcf2 134 PRINTS PR00332 Histidine triad family signature 4 20 7.8E-13 T 14-10-2018 IPR001310 Histidine triad (HIT) protein DB29_02452 bed88180167ec2f515851381375dfcf2 134 PRINTS PR00332 Histidine triad family signature 25 43 7.8E-13 T 14-10-2018 IPR001310 Histidine triad (HIT) protein DB29_02452 bed88180167ec2f515851381375dfcf2 134 Pfam PF01230 HIT domain 11 100 3.2E-19 T 14-10-2018 IPR001310 Histidine triad (HIT) protein DB29_02452 bed88180167ec2f515851381375dfcf2 134 SUPERFAMILY SSF54197 1 108 1.01E-33 T 14-10-2018 IPR036265 HIT-like superfamily DB29_02452 bed88180167ec2f515851381375dfcf2 134 Gene3D G3DSA:3.30.428.10 1 132 2.0E-34 T 14-10-2018 IPR036265 HIT-like superfamily DB29_0P0011 b0ca68b6130bde84f591b83bd70e2270 168 Pfam PF00565 Staphylococcal nuclease homologue 58 168 1.1E-22 T 14-10-2018 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold Reactome: R-HSA-6802952 DB29_0P0011 b0ca68b6130bde84f591b83bd70e2270 168 SMART SM00318 33 168 6.0E-30 T 14-10-2018 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold Reactome: R-HSA-6802952 DB29_0P0011 b0ca68b6130bde84f591b83bd70e2270 168 SUPERFAMILY SSF50199 30 168 1.44E-33 T 14-10-2018 DB29_0P0011 b0ca68b6130bde84f591b83bd70e2270 168 Gene3D G3DSA:2.40.50.90 30 168 1.5E-38 T 14-10-2018 IPR035437 SNase-like, OB-fold superfamily DB29_00307 68efe293eb2a92ab6399f333599bb15d 215 Pfam PF14181 YqfQ-like protein 45 215 8.1E-31 T 14-10-2018 IPR025571 YqfQ-like protein DB29_01701 d553b66511e2d1490e0c081279e28817 309 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 89 298 5.2E-13 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DB29_01701 d553b66511e2d1490e0c081279e28817 309 SUPERFAMILY SSF161098 70 296 1.13E-58 T 14-10-2018 IPR035906 MetI-like superfamily DB29_01701 d553b66511e2d1490e0c081279e28817 309 Gene3D G3DSA:1.10.3720.10 66 307 1.7E-68 T 14-10-2018 IPR035906 MetI-like superfamily DB29_00806 4d5689b861b0ffc3c0ac3ce598d903fc 209 Pfam PF01810 LysE type translocator 11 202 1.2E-40 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 DB29_00866 fe9197cf5a92d3d601195ff0f3eee626 114 Gene3D G3DSA:3.90.1210.30 24 106 1.2E-29 T 14-10-2018 DB29_00866 fe9197cf5a92d3d601195ff0f3eee626 114 Pfam PF08666 SAF domain 32 104 2.3E-17 T 14-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 DB29_00866 fe9197cf5a92d3d601195ff0f3eee626 114 SMART SM00858 32 104 6.9E-17 T 14-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 DB29_01194 5c377de814fda22f27a994c346c123fc 63 Gene3D G3DSA:1.10.1220.10 8 63 2.3E-18 T 14-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 DB29_00294 fa42c97591eefe7d6f87903fca1eb81d 118 ProDom PD067165 YQFZ MEMBRANE WALL BH1402 TRANSMEMBRANE OB1935 CELL 2 113 9.0E-51 T 14-10-2018 IPR020506 Uncharacterised protein family YqfZ DB29_02655 2203387399e71567b57fd71f81e0eb31 289 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 3 283 6.4E-93 T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 DB29_02655 2203387399e71567b57fd71f81e0eb31 289 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 131 142 - T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 DB29_02655 2203387399e71567b57fd71f81e0eb31 289 SUPERFAMILY SSF51569 5 283 1.7E-94 T 14-10-2018 DB29_02655 2203387399e71567b57fd71f81e0eb31 289 Pfam PF01116 Fructose-bisphosphate aldolase class-II 5 282 8.7E-94 T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 DB29_02655 2203387399e71567b57fd71f81e0eb31 289 PIRSF PIRSF001359 1 284 2.8E-97 T 14-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 DB29_02655 2203387399e71567b57fd71f81e0eb31 289 Gene3D G3DSA:3.20.20.70 3 284 8.5E-101 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DB29_01511 a9df49c3922509756f4153c62d9f7939 156 Pfam PF10002 Predicted membrane protein (DUF2243) 20 149 4.6E-47 T 14-10-2018 IPR018719 Protein of unknown function DUF2243, membrane DB29_00891 9015f8a1ee8b09cc5018815c0a4f862b 450 Pfam PF03611 PTS system sugar-specific permease component 6 403 1.4E-144 T 14-10-2018 IPR004703 Phosphotransferase system, sugar-specific permease component GO:0009401|GO:0016021 DB29_02341 febdc6beff3b5318aa99e80e89c9206a 58 ProDom PD020811 ATP SYNTHASE I ION HYDROLASE SUBUNIT I CF0 MEMBRANE HYDROGEN 1 31 1.0E-10 T 14-10-2018 DB29_02862 e7904625ad885698a4a5b66d20f5f758 205 SUPERFAMILY SSF53335 5 186 4.8E-26 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DB29_02862 e7904625ad885698a4a5b66d20f5f758 205 Pfam PF08241 Methyltransferase domain 49 139 1.2E-13 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 DB29_02862 e7904625ad885698a4a5b66d20f5f758 205 Gene3D G3DSA:3.40.50.150 4 204 2.8E-34 T 14-10-2018 DB29_03945 b18aa3cc4775b11a06e0133c9e4aa07e 223 Gene3D G3DSA:3.40.50.150 12 215 3.1E-36 T 14-10-2018 DB29_03945 b18aa3cc4775b11a06e0133c9e4aa07e 223 SUPERFAMILY SSF53335 9 207 1.81E-37 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DB29_03945 b18aa3cc4775b11a06e0133c9e4aa07e 223 Pfam PF08241 Methyltransferase domain 46 141 3.0E-21 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 DB29_00603 c538cb969a6777fc506b11eae8f2bd0f 376 Gene3D G3DSA:3.30.565.10 249 370 1.4E-14 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB29_00603 c538cb969a6777fc506b11eae8f2bd0f 376 Pfam PF07730 Histidine kinase 182 244 8.7E-13 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 DB29_03756 d3f930ea0c62c62a7ac30bc60b0b5bc0 762 Pfam PF00580 UvrD/REP helicase N-terminal domain 142 233 3.6E-22 T 14-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 DB29_03756 d3f930ea0c62c62a7ac30bc60b0b5bc0 762 Pfam PF00580 UvrD/REP helicase N-terminal domain 270 400 5.2E-34 T 14-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 DB29_03756 d3f930ea0c62c62a7ac30bc60b0b5bc0 762 Gene3D G3DSA:3.40.50.300 141 402 2.0E-76 T 14-10-2018 DB29_03756 d3f930ea0c62c62a7ac30bc60b0b5bc0 762 Gene3D G3DSA:3.40.50.300 410 752 3.2E-72 T 14-10-2018 DB29_03756 d3f930ea0c62c62a7ac30bc60b0b5bc0 762 Gene3D G3DSA:1.10.486.10 512 665 3.2E-72 T 14-10-2018 DB29_03756 d3f930ea0c62c62a7ac30bc60b0b5bc0 762 SUPERFAMILY SSF52540 138 758 3.48E-124 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_03756 d3f930ea0c62c62a7ac30bc60b0b5bc0 762 Gene3D G3DSA:1.10.10.160 244 318 2.0E-76 T 14-10-2018 IPR013986 DExx box DNA helicase domain superfamily DB29_03756 d3f930ea0c62c62a7ac30bc60b0b5bc0 762 Pfam PF13361 UvrD-like helicase C-terminal domain 406 738 7.0E-43 T 14-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 DB29_02495 644cd5e3c46df5d95876ee4e83246392 212 Pfam PF13630 SdpI/YhfL protein family 134 202 2.9E-22 T 14-10-2018 IPR025962 SdpI/YhfL protein family DB29_02495 644cd5e3c46df5d95876ee4e83246392 212 PIRSF PIRSF038959 1 212 3.6E-56 T 14-10-2018 IPR026272 Immunity protein SdpI DB29_02495 644cd5e3c46df5d95876ee4e83246392 212 Pfam PF07853 Protein of unknown function (DUF1648) 11 52 5.7E-15 T 14-10-2018 IPR012867 Domain of unknown function DUF1648 DB29_01532 55af003caa0e5efe53185c13d0a03d43 330 Pfam PF00534 Glycosyl transferases group 1 204 295 3.4E-11 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 DB29_01532 55af003caa0e5efe53185c13d0a03d43 330 SUPERFAMILY SSF53756 109 314 7.33E-29 T 14-10-2018 DB29_01532 55af003caa0e5efe53185c13d0a03d43 330 Gene3D G3DSA:3.40.50.2000 150 315 5.5E-18 T 14-10-2018 DB29_03555 9c7a19af90962e932e07f2db9049d291 308 Pfam PF00248 Aldo/keto reductase family 18 305 1.1E-43 T 14-10-2018 IPR023210 NADP-dependent oxidoreductase domain DB29_03555 9c7a19af90962e932e07f2db9049d291 308 SUPERFAMILY SSF51430 13 305 2.62E-58 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily DB29_03555 9c7a19af90962e932e07f2db9049d291 308 Gene3D G3DSA:3.20.20.100 10 308 2.7E-66 T 14-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily DB29_02748 79e77701bbda79c23630827732196094 362 Gene3D G3DSA:1.25.40.10 2 356 9.9E-75 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DB29_02748 79e77701bbda79c23630827732196094 362 SUPERFAMILY SSF48452 211 294 9.28E-8 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DB29_02748 79e77701bbda79c23630827732196094 362 SUPERFAMILY SSF48452 104 236 2.84E-11 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DB29_02512 32d26f181eb1eaede12f67aa55f077e5 226 Pfam PF02397 Bacterial sugar transferase 32 219 6.1E-72 T 14-10-2018 IPR003362 Bacterial sugar transferase DB29_00467 fc92223bac3ce8be559a3055ebe85524 124 SUPERFAMILY SSF49503 38 123 3.85E-12 T 14-10-2018 IPR008972 Cupredoxin DB29_00467 fc92223bac3ce8be559a3055ebe85524 124 Gene3D G3DSA:2.60.40.420 18 124 8.9E-16 T 14-10-2018 IPR008972 Cupredoxin DB29_04234 856717f60717a0dcb8ed4f38ea678a27 183 TIGRFAM TIGR02126 phgtail_TP901_1: phage major tail protein, TP901-1 family 3 132 2.0E-21 T 14-10-2018 IPR011855 Phage major tail protein TP901-1 DB29_04234 856717f60717a0dcb8ed4f38ea678a27 183 Pfam PF06199 Phage tail tube protein 3 133 1.4E-19 T 14-10-2018 IPR011855 Phage major tail protein TP901-1 DB29_03629 149b1cb7a21c2ee9abc2ec7a9d019e89 332 Gene3D G3DSA:3.90.1200.10 93 329 1.2E-30 T 14-10-2018 DB29_03629 149b1cb7a21c2ee9abc2ec7a9d019e89 332 Gene3D G3DSA:3.30.200.20 2 92 3.0E-14 T 14-10-2018 DB29_03629 149b1cb7a21c2ee9abc2ec7a9d019e89 332 TIGRFAM TIGR02904 spore_ysxE: spore coat protein YsxE 5 310 5.8E-127 T 14-10-2018 IPR014253 Spore coat protein YsxE DB29_03629 149b1cb7a21c2ee9abc2ec7a9d019e89 332 SUPERFAMILY SSF56112 6 311 1.62E-22 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily DB29_01980 8ce9d0f7eb5c9312ae9bace52a0c9d04 51 Pfam PF00269 Small, acid-soluble spore proteins, alpha/beta type 3 47 1.8E-7 T 14-10-2018 IPR001448 Small acid-soluble spore protein, alpha/beta-type GO:0003690|GO:0006265 DB29_01980 8ce9d0f7eb5c9312ae9bace52a0c9d04 51 Gene3D G3DSA:1.10.8.910 1 51 2.5E-5 T 14-10-2018 IPR038300 SASP, alpha/beta-type superfamily DB29_01980 8ce9d0f7eb5c9312ae9bace52a0c9d04 51 ProSitePatterns PS00304 Small, acid-soluble spore proteins, alpha/beta type, signature 1. 6 15 - T 14-10-2018 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site GO:0003690|GO:0006265 DB29_03356 b3e62999c49bc4c3fbe384786dd06672 150 Pfam PF01934 Protein of unknown function DUF86 10 126 1.6E-23 T 14-10-2018 IPR008201 Protein of unknown function DUF86 DB29_03356 b3e62999c49bc4c3fbe384786dd06672 150 Gene3D G3DSA:1.20.120.580 1 144 5.1E-52 T 14-10-2018 IPR037038 Bsu32300-like superfamily DB29_00238 dc6f29c9214b9e4e10faf2e65e0a079f 266 SUPERFAMILY SSF88713 31 249 5.11E-63 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 DB29_00238 dc6f29c9214b9e4e10faf2e65e0a079f 266 Gene3D G3DSA:3.20.20.370 28 251 7.7E-72 T 14-10-2018 DB29_00238 dc6f29c9214b9e4e10faf2e65e0a079f 266 Pfam PF04748 Divergent polysaccharide deacetylase 34 249 8.3E-64 T 14-10-2018 IPR006837 Divergent polysaccharide deacetylase DB29_02764 453a6773ae6d92c719e739fcd28f6762 475 SUPERFAMILY SSF53474 97 457 9.11E-27 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DB29_02764 453a6773ae6d92c719e739fcd28f6762 475 Pfam PF03403 Platelet-activating factor acetylhydrolase, isoform II 106 245 7.9E-14 T 14-10-2018 IPR005065 Platelet-activating factor acetylhydrolase-like GO:0003847|GO:0016042 KEGG: 00565+3.1.1.47 DB29_02764 453a6773ae6d92c719e739fcd28f6762 475 Pfam PF03403 Platelet-activating factor acetylhydrolase, isoform II 294 448 8.4E-6 T 14-10-2018 IPR005065 Platelet-activating factor acetylhydrolase-like GO:0003847|GO:0016042 KEGG: 00565+3.1.1.47 DB29_02764 453a6773ae6d92c719e739fcd28f6762 475 Gene3D G3DSA:3.40.50.1820 101 468 8.8E-86 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DB29_03304 463bdb7d7535120ce8dcc0b7dc33d554 255 Pfam PF01522 Polysaccharide deacetylase 18 136 6.1E-33 T 14-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 DB29_03304 463bdb7d7535120ce8dcc0b7dc33d554 255 SUPERFAMILY SSF88713 11 213 8.65E-60 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 DB29_03304 463bdb7d7535120ce8dcc0b7dc33d554 255 Gene3D G3DSA:3.20.20.370 4 223 7.7E-70 T 14-10-2018 DB29_02926 7a2647d7437065d6fdde64d460156d07 316 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 252 265 - T 14-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 DB29_02926 7a2647d7437065d6fdde64d460156d07 316 SUPERFAMILY SSF53613 1 307 2.65E-86 T 14-10-2018 IPR029056 Ribokinase-like DB29_02926 7a2647d7437065d6fdde64d460156d07 316 Pfam PF00294 pfkB family carbohydrate kinase 3 299 8.6E-59 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB DB29_02926 7a2647d7437065d6fdde64d460156d07 316 Gene3D G3DSA:3.40.1190.20 1 313 1.6E-93 T 14-10-2018 IPR029056 Ribokinase-like DB29_01929 1621221e77e7e8ba6f3f2f3a9d5608ef 457 SUPERFAMILY SSF54211 254 456 2.47E-41 T 14-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold DB29_01929 1621221e77e7e8ba6f3f2f3a9d5608ef 457 Gene3D G3DSA:3.40.50.300 62 289 8.8E-44 T 14-10-2018 DB29_01929 1621221e77e7e8ba6f3f2f3a9d5608ef 457 Gene3D G3DSA:3.30.230.10 322 456 5.0E-21 T 14-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup DB29_01929 1621221e77e7e8ba6f3f2f3a9d5608ef 457 SMART SM00382 89 243 4.2E-10 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_01929 1621221e77e7e8ba6f3f2f3a9d5608ef 457 Pfam PF13481 AAA domain 73 221 1.2E-17 T 14-10-2018 DB29_01929 1621221e77e7e8ba6f3f2f3a9d5608ef 457 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 451 9.2E-214 T 14-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 DB29_01929 1621221e77e7e8ba6f3f2f3a9d5608ef 457 Pfam PF13541 Subunit ChlI of Mg-chelatase 363 429 6.0E-9 T 14-10-2018 DB29_01929 1621221e77e7e8ba6f3f2f3a9d5608ef 457 Hamap MF_01498 DNA repair protein RadA [radA]. 21 455 44.568 T 14-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 DB29_01929 1621221e77e7e8ba6f3f2f3a9d5608ef 457 PRINTS PR01874 DNA repair protein radA signature 123 140 1.6E-94 T 14-10-2018 DB29_01929 1621221e77e7e8ba6f3f2f3a9d5608ef 457 PRINTS PR01874 DNA repair protein radA signature 212 240 1.6E-94 T 14-10-2018 DB29_01929 1621221e77e7e8ba6f3f2f3a9d5608ef 457 PRINTS PR01874 DNA repair protein radA signature 10 34 1.6E-94 T 14-10-2018 DB29_01929 1621221e77e7e8ba6f3f2f3a9d5608ef 457 PRINTS PR01874 DNA repair protein radA signature 81 109 1.6E-94 T 14-10-2018 DB29_01929 1621221e77e7e8ba6f3f2f3a9d5608ef 457 PRINTS PR01874 DNA repair protein radA signature 321 344 1.6E-94 T 14-10-2018 DB29_01929 1621221e77e7e8ba6f3f2f3a9d5608ef 457 PRINTS PR01874 DNA repair protein radA signature 173 197 1.6E-94 T 14-10-2018 DB29_01929 1621221e77e7e8ba6f3f2f3a9d5608ef 457 PRINTS PR01874 DNA repair protein radA signature 247 273 1.6E-94 T 14-10-2018 DB29_01929 1621221e77e7e8ba6f3f2f3a9d5608ef 457 SUPERFAMILY SSF52540 60 268 9.96E-50 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_04126 3a43d68a8ec6ff050a51dab4c596f5d5 45 Pfam PF08179 Small acid-soluble spore protein P family 1 45 1.5E-18 T 14-10-2018 IPR012614 Small acid-soluble spore protein, SspP GO:0030435 DB29_02594 7691a83f9a9ace5bca816c4b2a063a11 296 SUPERFAMILY SSF47240 1 292 6.96E-90 T 14-10-2018 IPR009078 Ferritin-like superfamily DB29_02594 7691a83f9a9ace5bca816c4b2a063a11 296 Pfam PF05067 Manganese containing catalase 9 295 2.5E-80 T 14-10-2018 IPR007760 Manganese catalase DB29_02594 7691a83f9a9ace5bca816c4b2a063a11 296 Gene3D G3DSA:1.20.1260.130 2 296 1.0E-96 T 14-10-2018 DB29_00113 50d2d04f0eadfbe99ed7548c3efe576a 225 Pfam PF02224 Cytidylate kinase 7 220 1.5E-76 T 14-10-2018 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 DB29_00113 50d2d04f0eadfbe99ed7548c3efe576a 225 TIGRFAM TIGR00017 cmk: cytidylate kinase 5 217 1.5E-81 T 14-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 DB29_00113 50d2d04f0eadfbe99ed7548c3efe576a 225 Hamap MF_00238 Cytidylate kinase [cmk]. 5 223 33.853 T 14-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 DB29_00113 50d2d04f0eadfbe99ed7548c3efe576a 225 Gene3D G3DSA:3.40.50.300 1 224 6.1E-88 T 14-10-2018 DB29_00113 50d2d04f0eadfbe99ed7548c3efe576a 225 SUPERFAMILY SSF52540 3 222 1.03E-46 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_00356 b75ad1b3a3a996bdf645c646cad18479 88 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 86 2.5E-30 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 DB29_00356 b75ad1b3a3a996bdf645c646cad18479 88 Pfam PF01649 Ribosomal protein S20 2 84 3.8E-30 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 DB29_00356 b75ad1b3a3a996bdf645c646cad18479 88 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 14 88 1.0E-34 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 DB29_00356 b75ad1b3a3a996bdf645c646cad18479 88 SUPERFAMILY SSF46992 3 86 9.16E-32 T 14-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 DB29_00356 b75ad1b3a3a996bdf645c646cad18479 88 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 18.523 T 14-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 DB29_00356 b75ad1b3a3a996bdf645c646cad18479 88 Gene3D G3DSA:1.20.58.110 1 87 2.5E-32 T 14-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 DB29_03050 8f3374b5d1ac77ac1d67b1de06ce12b7 633 PIRSF PIRSF018968 1 633 3.2E-257 T 14-10-2018 IPR027022 ABC transporter permease protein, BceB-type GO:0055085 DB29_03050 8f3374b5d1ac77ac1d67b1de06ce12b7 633 Pfam PF02687 FtsX-like permease family 85 179 2.1E-10 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 DB29_02922 810a618986d4d9215c417e19fb594378 164 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 24 152 8.4E-27 T 14-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ DB29_02405 63f7f62a7b85067a7a21741f37ffd74a 138 Pfam PF15601 Immunity protein 70 6 135 1.2E-58 T 14-10-2018 IPR028185 Immunity protein 70 DB29_00998 add2d68af53a617a65da50be270530a4 484 Gene3D G3DSA:3.40.50.1820 53 271 2.6E-30 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DB29_00998 add2d68af53a617a65da50be270530a4 484 SUPERFAMILY SSF53474 54 263 3.3E-24 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DB29_03484 c2814bf6eda08b3afeae1b169a4f4b96 138 Pfam PF04837 MbeB-like, N-term conserved region 99 132 1.2E-4 T 14-10-2018 IPR006922 Mobilization protein MbeB-like DB29_03484 c2814bf6eda08b3afeae1b169a4f4b96 138 Pfam PF12732 YtxH-like protein 10 91 6.9E-21 T 14-10-2018 IPR024623 Uncharacterised protein family YtxH DB29_02234 fe845e50f5785fbb800b002b44656087 293 Pfam PF00950 ABC 3 transport family 8 273 3.0E-50 T 14-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 DB29_02234 fe845e50f5785fbb800b002b44656087 293 Gene3D G3DSA:1.10.3470.10 8 274 1.1E-5 T 14-10-2018 IPR037294 ABC transporter, BtuC-like DB29_02234 fe845e50f5785fbb800b002b44656087 293 SUPERFAMILY SSF81345 9 269 2.88E-34 T 14-10-2018 IPR037294 ABC transporter, BtuC-like DB29_04154 2901cf7995a1e89e6c79b6aa7c4c47dd 93 ProDom PD062384 GERMINATION SPORE TRANSMEMBRANE MEMBRANE MORPHOGENESIS YWCE 1 87 7.0E-43 T 14-10-2018 IPR020185 Spore morphogenesis/germination protein YwcE DB29_04154 2901cf7995a1e89e6c79b6aa7c4c47dd 93 Pfam PF17368 Spore morphogenesis and germination protein YwcE 1 85 1.2E-35 T 14-10-2018 IPR020185 Spore morphogenesis/germination protein YwcE DB29_01725 47e23fb70c4f28a32a2124951954f114 265 SUPERFAMILY SSF51658 14 239 6.55E-32 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily DB29_01725 47e23fb70c4f28a32a2124951954f114 265 Pfam PF01261 Xylose isomerase-like TIM barrel 79 214 9.4E-17 T 14-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain DB29_01725 47e23fb70c4f28a32a2124951954f114 265 Gene3D G3DSA:3.20.20.150 25 253 1.5E-35 T 14-10-2018 DB29_03924 d44c95d36e39812e3e750d2dcaa52378 98 Gene3D G3DSA:2.30.30.240 1 79 1.3E-14 T 14-10-2018 DB29_03924 d44c95d36e39812e3e750d2dcaa52378 98 TIGRFAM TIGR02888 spore_YlmC_YmxH: sporulation protein, YlmC/YmxH family 3 78 2.0E-26 T 14-10-2018 IPR014238 Sporulation protein YlmC/YmxH DB29_03924 d44c95d36e39812e3e750d2dcaa52378 98 SUPERFAMILY SSF50346 2 76 2.88E-13 T 14-10-2018 IPR011033 PRC-barrel-like superfamily DB29_03924 d44c95d36e39812e3e750d2dcaa52378 98 Pfam PF05239 PRC-barrel domain 3 80 1.8E-14 T 14-10-2018 IPR027275 PRC-barrel domain DB29_02476 2074c0492937a22d339db47ad28c4991 248 SUPERFAMILY SSF160104 22 173 1.01E-16 T 14-10-2018 IPR023375 Acetoacetate decarboxylase domain superfamily KEGG: 00072+4.1.1.4|KEGG: 00640+4.1.1.4|MetaCyc: PWY-5451|MetaCyc: PWY-6588|MetaCyc: PWY-6876|MetaCyc: PWY-7466 DB29_02476 2074c0492937a22d339db47ad28c4991 248 Pfam PF09844 Uncharacterized conserved protein (COG2071) 20 230 1.6E-72 T 14-10-2018 IPR018644 Protein of unknown function DUF2071 DB29_04025 57f8fda42da0517b3eb3ee136c98aab8 260 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 10 252 1.4E-61 T 14-10-2018 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 DB29_04025 57f8fda42da0517b3eb3ee136c98aab8 260 Pfam PF01311 Bacterial export proteins, family 1 10 243 7.8E-67 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 DB29_04025 57f8fda42da0517b3eb3ee136c98aab8 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 177 199 1.4E-29 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 DB29_04025 57f8fda42da0517b3eb3ee136c98aab8 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 199 218 1.4E-29 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 DB29_04025 57f8fda42da0517b3eb3ee136c98aab8 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 74 93 1.4E-29 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 DB29_04025 57f8fda42da0517b3eb3ee136c98aab8 260 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 17 38 1.4E-29 T 14-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 DB29_01206 c64fce5b7301bec35685b0d6ba45b131 247 Pfam PF01261 Xylose isomerase-like TIM barrel 23 203 5.4E-19 T 14-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain DB29_01206 c64fce5b7301bec35685b0d6ba45b131 247 Gene3D G3DSA:3.20.20.150 1 245 3.9E-70 T 14-10-2018 DB29_01206 c64fce5b7301bec35685b0d6ba45b131 247 SUPERFAMILY SSF51658 6 246 9.8E-42 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily DB29_00169 964937363a395b70a4601ff009e0ff57 105 Pfam PF05597 Poly(hydroxyalcanoate) granule associated protein (phasin) 22 100 3.4E-10 T 14-10-2018 IPR008769 Poly granule associated DB29_02158 382cc18fb99b1b56dba566be6a365354 325 SUPERFAMILY SSF54593 3 311 1.61E-48 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DB29_02158 382cc18fb99b1b56dba566be6a365354 325 Gene3D G3DSA:3.10.180.10 66 217 5.2E-108 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DB29_02158 382cc18fb99b1b56dba566be6a365354 325 Gene3D G3DSA:3.10.180.10 5 310 5.2E-108 T 14-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase DB29_02158 382cc18fb99b1b56dba566be6a365354 325 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 166 264 1.3E-7 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain DB29_02158 382cc18fb99b1b56dba566be6a365354 325 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 115 5.5E-9 T 14-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain DB29_03330 0a90ef45780993db0e24940ce6991a1a 79 SUPERFAMILY SSF51445 6 77 8.93E-12 T 14-10-2018 IPR017853 Glycoside hydrolase superfamily DB29_03904 97a78a9ebcd17025b826cddce94ac288 295 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 2 291 8.0E-62 T 14-10-2018 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0008677|GO:0015940 KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654 DB29_03904 97a78a9ebcd17025b826cddce94ac288 295 SUPERFAMILY SSF48179 177 291 1.8E-26 T 14-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 DB29_03904 97a78a9ebcd17025b826cddce94ac288 295 Gene3D G3DSA:3.40.50.720 1 167 5.0E-36 T 14-10-2018 DB29_03904 97a78a9ebcd17025b826cddce94ac288 295 Pfam PF02558 Ketopantoate reductase PanE/ApbA 3 147 1.3E-24 T 14-10-2018 IPR013332 Ketopantoate reductase, N-terminal domain DB29_03904 97a78a9ebcd17025b826cddce94ac288 295 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 179 290 3.0E-32 T 14-10-2018 IPR013752 Ketopantoate reductase, C-terminal domain DB29_03904 97a78a9ebcd17025b826cddce94ac288 295 Gene3D G3DSA:1.10.1040.10 173 295 8.6E-37 T 14-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 DB29_03904 97a78a9ebcd17025b826cddce94ac288 295 SUPERFAMILY SSF51735 2 150 2.14E-14 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_03798 517f1967ab59019d8fa26d67dce64538 162 SUPERFAMILY SSF51230 82 159 3.27E-23 T 14-10-2018 IPR011053 Single hybrid motif DB29_03798 517f1967ab59019d8fa26d67dce64538 162 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 120 133 4.1E-15 T 14-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 DB29_03798 517f1967ab59019d8fa26d67dce64538 162 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 88 101 4.1E-15 T 14-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 DB29_03798 517f1967ab59019d8fa26d67dce64538 162 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 105 119 4.1E-15 T 14-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 DB29_03798 517f1967ab59019d8fa26d67dce64538 162 Pfam PF00364 Biotin-requiring enzyme 85 157 1.7E-21 T 14-10-2018 IPR000089 Biotin/lipoyl attachment DB29_03798 517f1967ab59019d8fa26d67dce64538 162 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 4 159 1.3E-50 T 14-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 DB29_03798 517f1967ab59019d8fa26d67dce64538 162 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 115 132 - T 14-10-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 DB29_03798 517f1967ab59019d8fa26d67dce64538 162 Gene3D G3DSA:2.40.50.100 82 159 1.2E-27 T 14-10-2018 DB29_00932 558a31e8ca64f2481ddc51ef2c783938 366 SUPERFAMILY SSF48452 90 251 2.33E-5 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DB29_00932 558a31e8ca64f2481ddc51ef2c783938 366 Gene3D G3DSA:1.25.40.10 177 311 1.4E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DB29_02338 e6b5c994ee9ac600d3c2b1421fa7559d 157 Gene3D G3DSA:3.40.630.30 2 136 4.5E-23 T 14-10-2018 DB29_02338 e6b5c994ee9ac600d3c2b1421fa7559d 157 SUPERFAMILY SSF55729 3 136 3.87E-23 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase DB29_02338 e6b5c994ee9ac600d3c2b1421fa7559d 157 Pfam PF13673 Acetyltransferase (GNAT) domain 34 135 4.6E-13 T 14-10-2018 IPR000182 GNAT domain DB29_02399 4e4d7a950b5a64af7f28e44cb5722e7d 127 Pfam PF16888 Domain of unknown function (DUF5082) 6 124 4.7E-37 T 14-10-2018 IPR031681 Protein of unknown function DUF5082 DB29_02399 4e4d7a950b5a64af7f28e44cb5722e7d 127 ProDom PD338809 BH2346 YXIB BH4015 BH0976 PREFOLDIN 17 108 4.0E-48 T 14-10-2018 DB29_01263 97783ce1cbec8333ceb2ef1aebfe730d 150 SUPERFAMILY SSF50475 2 148 4.07E-41 T 14-10-2018 DB29_01263 97783ce1cbec8333ceb2ef1aebfe730d 150 Gene3D G3DSA:2.30.110.10 1 150 4.4E-41 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 DB29_01263 97783ce1cbec8333ceb2ef1aebfe730d 150 SMART SM00903 10 149 7.8E-47 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 DB29_01263 97783ce1cbec8333ceb2ef1aebfe730d 150 Pfam PF01613 Flavin reductase like domain 10 149 5.3E-33 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 DB29_03431 bc6f67d2c322915d1537633ba6d3b57e 180 Gene3D G3DSA:2.160.10.10 1 180 2.6E-73 T 14-10-2018 DB29_03431 bc6f67d2c322915d1537633ba6d3b57e 180 SUPERFAMILY SSF51161 3 170 7.9E-49 T 14-10-2018 IPR011004 Trimeric LpxA-like superfamily DB29_03431 bc6f67d2c322915d1537633ba6d3b57e 180 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 87 120 8.2E-7 T 14-10-2018 IPR001451 Hexapeptide repeat DB29_04378 eaa0a5ca380c39d09ca38ed638af1778 179 SUPERFAMILY SSF103088 103 178 1.44E-16 T 14-10-2018 IPR036737 OmpA-like domain superfamily DB29_04378 eaa0a5ca380c39d09ca38ed638af1778 179 Gene3D G3DSA:3.30.1330.60 41 179 3.7E-29 T 14-10-2018 IPR036737 OmpA-like domain superfamily DB29_04378 eaa0a5ca380c39d09ca38ed638af1778 179 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 1 32 3.2E-7 T 14-10-2018 IPR025713 Motility protein B, N-terminal domain DB29_04378 eaa0a5ca380c39d09ca38ed638af1778 179 Pfam PF00691 OmpA family 113 176 1.5E-9 T 14-10-2018 IPR006665 OmpA-like domain DB29_01073 ee59718797ac736dfef6ccd94add017d 239 Pfam PF05709 Phage tail protein 23 239 4.4E-26 T 14-10-2018 IPR008841 Siphovirus-type tail component DB29_01073 ee59718797ac736dfef6ccd94add017d 239 Gene3D G3DSA:2.40.30.200 2 126 1.3E-13 T 14-10-2018 IPR038675 Streptococcus phage 7201 Orf34, N-terminal domain superfamily DB29_01073 ee59718797ac736dfef6ccd94add017d 239 TIGRFAM TIGR01633 phi3626_gp14_N: putative phage tail component, N-terminal domain 5 124 1.2E-12 T 14-10-2018 IPR006520 Streptococcus phage 7201, Orf34, N-terminal DB29_01073 ee59718797ac736dfef6ccd94add017d 239 Gene3D G3DSA:2.60.120.860 130 232 2.8E-10 T 14-10-2018 DB29_02873 15545fc86e9ee48d68579ad797e2a335 225 Gene3D G3DSA:3.30.240.20 80 155 7.1E-24 T 14-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily DB29_02873 15545fc86e9ee48d68579ad797e2a335 225 Gene3D G3DSA:3.30.240.20 169 225 5.6E-18 T 14-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily DB29_02873 15545fc86e9ee48d68579ad797e2a335 225 Pfam PF04239 Protein of unknown function (DUF421) 88 204 8.7E-31 T 14-10-2018 IPR007353 Protein of unknown function DUF421 DB29_00190 ab1868550983318adb2fac098d8ad157 370 Pfam PF12725 Protein of unknown function (DUF3810) 38 360 3.0E-96 T 14-10-2018 IPR024294 Protein of unknown function DUF3810 DB29_01218 97f18d6986937afc632a711f59103e54 228 Pfam PF00582 Universal stress protein family 11 129 1.0E-7 T 14-10-2018 IPR006016 UspA DB29_01218 97f18d6986937afc632a711f59103e54 228 Gene3D G3DSA:3.40.50.620 1 132 4.7E-10 T 14-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold DB29_01218 97f18d6986937afc632a711f59103e54 228 SUPERFAMILY SSF52402 8 129 1.99E-13 T 14-10-2018 DB29_01249 25933074099adf4afe0e4b03e4acddfe 224 TIGRFAM TIGR04306 salvage_TenA: thiaminase II 12 216 4.2E-54 T 14-10-2018 IPR027574 Thiaminase II GO:0006772|GO:0050334 KEGG: 00730+3.5.99.2|MetaCyc: PWY-6899|MetaCyc: PWY-7356 DB29_01249 25933074099adf4afe0e4b03e4acddfe 224 Gene3D G3DSA:1.20.910.10 1 224 2.6E-68 T 14-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 DB29_01249 25933074099adf4afe0e4b03e4acddfe 224 Pfam PF03070 TENA/THI-4/PQQC family 9 215 8.1E-47 T 14-10-2018 IPR004305 Thiaminase-2/PQQC DB29_01249 25933074099adf4afe0e4b03e4acddfe 224 SUPERFAMILY SSF48613 3 222 4.45E-70 T 14-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 DB29_02507 3e54bb49d0246d1ebbef6f67bbeced8f 362 SMART SM00028 246 282 400.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DB29_02507 3e54bb49d0246d1ebbef6f67bbeced8f 362 SMART SM00028 207 240 13.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DB29_02507 3e54bb49d0246d1ebbef6f67bbeced8f 362 SMART SM00028 169 202 160.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DB29_02507 3e54bb49d0246d1ebbef6f67bbeced8f 362 SMART SM00028 89 122 250.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DB29_02507 3e54bb49d0246d1ebbef6f67bbeced8f 362 SMART SM00028 129 162 34.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DB29_02507 3e54bb49d0246d1ebbef6f67bbeced8f 362 Gene3D G3DSA:1.25.40.10 1 357 1.5E-77 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DB29_02507 3e54bb49d0246d1ebbef6f67bbeced8f 362 SUPERFAMILY SSF48452 90 272 6.56E-15 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DB29_02507 3e54bb49d0246d1ebbef6f67bbeced8f 362 Pfam PF13432 Tetratricopeptide repeat 213 272 1.8E-4 T 14-10-2018 DB29_03069 606f6c5fe6a1d795f30d460a5d6b6d1f 107 Pfam PF11122 Inner spore coat protein D 32 92 3.5E-18 T 14-10-2018 IPR020108 Spore coat protein CotD DB29_03069 606f6c5fe6a1d795f30d460a5d6b6d1f 107 ProDom PD057197 SPORE COAT CAPSID D INNER D COTD SPORULATION 32 80 2.0E-20 T 14-10-2018 IPR020108 Spore coat protein CotD DB29_01600 68442bd4d1644bf1cb2a24e57ce503df 154 TIGRFAM TIGR00848 fruA: PTS system, fructose subfamily, IIA component 6 134 3.7E-40 T 14-10-2018 IPR004715 Phosphotransferase system, IIA component fructose subfamily GO:0008982|GO:0009401|GO:0016021 DB29_01600 68442bd4d1644bf1cb2a24e57ce503df 154 Gene3D G3DSA:3.40.930.10 1 150 3.0E-45 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 DB29_01600 68442bd4d1644bf1cb2a24e57ce503df 154 SUPERFAMILY SSF55804 1 149 3.27E-40 T 14-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 DB29_01600 68442bd4d1644bf1cb2a24e57ce503df 154 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 52 68 - T 14-10-2018 IPR002178 PTS EIIA type-2 domain DB29_01600 68442bd4d1644bf1cb2a24e57ce503df 154 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 5 149 6.0E-40 T 14-10-2018 IPR002178 PTS EIIA type-2 domain DB29_01715 b54ef30ab55732ed162259c0ceee297f 87 Pfam PF17279 Family of unknown function (DUF5344) 1 85 7.2E-19 T 14-10-2018 DB29_02919 295cdecae2453098831b7bf12f9bf439 107 Pfam PF03551 Transcriptional regulator PadR-like family 14 88 4.2E-20 T 14-10-2018 IPR005149 Transcription regulator PadR, N-terminal DB29_02919 295cdecae2453098831b7bf12f9bf439 107 SUPERFAMILY SSF46785 10 106 3.13E-24 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_02919 295cdecae2453098831b7bf12f9bf439 107 Gene3D G3DSA:1.10.10.10 1 106 4.4E-29 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_01771 b760d3dc62c766b0e2ebf99524d4c616 202 Gene3D G3DSA:3.10.450.40 49 129 5.8E-26 T 14-10-2018 DB29_01771 b760d3dc62c766b0e2ebf99524d4c616 202 Gene3D G3DSA:3.10.450.40 131 202 4.8E-23 T 14-10-2018 DB29_01771 b760d3dc62c766b0e2ebf99524d4c616 202 Pfam PF03413 Peptidase propeptide and YPEB domain 141 198 2.5E-11 T 14-10-2018 IPR025711 PepSY domain DB29_01771 b760d3dc62c766b0e2ebf99524d4c616 202 Pfam PF03413 Peptidase propeptide and YPEB domain 61 116 1.5E-7 T 14-10-2018 IPR025711 PepSY domain DB29_01431 7dfe8f1a495456e218dede8b84661ca0 53 Pfam PF10055 Uncharacterized small protein (DUF2292) 9 44 7.2E-17 T 14-10-2018 IPR018743 Protein of unknown function DUF2292 DB29_01786 c9f9fb615097c59fa4f2d58dc0f5093d 123 TIGRFAM TIGR04398 SLAP_DUP: SLAP domain 3 110 2.7E-14 T 14-10-2018 IPR030910 SLAP domain, Bacillus-type DB29_02750 9b6ebedd472c78a4b6881470415f6971 360 Gene3D G3DSA:3.30.70.360 162 272 5.4E-88 T 14-10-2018 DB29_02750 9b6ebedd472c78a4b6881470415f6971 360 Pfam PF07687 Peptidase dimerisation domain 161 259 4.9E-16 T 14-10-2018 IPR011650 Peptidase M20, dimerisation domain DB29_02750 9b6ebedd472c78a4b6881470415f6971 360 SUPERFAMILY SSF53187 2 354 7.71E-51 T 14-10-2018 DB29_02750 9b6ebedd472c78a4b6881470415f6971 360 SUPERFAMILY SSF55031 163 266 1.06E-19 T 14-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain DB29_02750 9b6ebedd472c78a4b6881470415f6971 360 Gene3D G3DSA:3.40.630.10 7 340 5.4E-88 T 14-10-2018 DB29_02750 9b6ebedd472c78a4b6881470415f6971 360 Pfam PF01546 Peptidase family M20/M25/M40 63 354 1.3E-27 T 14-10-2018 IPR002933 Peptidase M20 GO:0016787 DB29_04190 df23ccdaa7d9eeeff07c1bbaa2ca475f 136 Pfam PF09954 Uncharacterized protein conserved in bacteria (DUF2188) 89 130 3.0E-10 T 14-10-2018 IPR018691 Protein of unknown function DUF2188 DB29_00517 20bb16edd5626d37d9f0ca7cf451afc4 70 Gene3D G3DSA:2.40.50.100 3 70 3.9E-28 T 14-10-2018 DB29_00517 20bb16edd5626d37d9f0ca7cf451afc4 70 Pfam PF00364 Biotin-requiring enzyme 5 69 1.4E-20 T 14-10-2018 IPR000089 Biotin/lipoyl attachment DB29_00517 20bb16edd5626d37d9f0ca7cf451afc4 70 SUPERFAMILY SSF51230 2 70 5.76E-23 T 14-10-2018 IPR011053 Single hybrid motif DB29_02542 66a74531b662e03ac83bc8425c641e12 135 Pfam PF03703 Bacterial PH domain 49 125 8.2E-16 T 14-10-2018 IPR005182 Domain of unknown function DUF304 DB29_03511 057e38abdea3ee5aa2fc7db2d68d096b 263 Pfam PF12787 EcsC protein family 76 250 2.1E-9 T 14-10-2018 IPR024787 EcsC protein DB29_00397 ae717943023cf8fc084979b6bfc8d0e1 468 Pfam PF03606 C4-dicarboxylate anaerobic carrier 19 463 3.9E-103 T 14-10-2018 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 DB29_03341 416241e1f22a8afd7a99e7d007c7049b 150 Pfam PF06713 Bacterial PH domain 61 137 1.4E-16 T 14-10-2018 IPR009589 Sublancin immunity protein SunI GO:0030153 DB29_02219 6e1946efd0e632beb3a4b4f2daf5dd9a 206 SUPERFAMILY SSF50475 2 197 5.89E-40 T 14-10-2018 DB29_02219 6e1946efd0e632beb3a4b4f2daf5dd9a 206 SMART SM00903 20 180 3.8E-25 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 DB29_02219 6e1946efd0e632beb3a4b4f2daf5dd9a 206 Gene3D G3DSA:2.30.110.10 2 206 4.2E-59 T 14-10-2018 IPR012349 FMN-binding split barrel GO:0048037 DB29_02219 6e1946efd0e632beb3a4b4f2daf5dd9a 206 Pfam PF01613 Flavin reductase like domain 23 168 4.9E-19 T 14-10-2018 IPR002563 Flavin reductase like domain GO:0010181 DB29_04298 6978611b99aac5d0086530039a262646 434 Gene3D G3DSA:3.20.20.140 61 352 1.9E-139 T 14-10-2018 DB29_04298 6978611b99aac5d0086530039a262646 434 Hamap MF_01281 5'-deoxyadenosine deaminase [dadD]. 2 433 44.4 T 14-10-2018 IPR023512 Deaminase MtaD/DadD GO:0019239 DB29_04298 6978611b99aac5d0086530039a262646 434 SUPERFAMILY SSF51556 60 357 1.43E-90 T 14-10-2018 IPR032466 Metal-dependent hydrolase DB29_04298 6978611b99aac5d0086530039a262646 434 Pfam PF01979 Amidohydrolase family 58 404 3.4E-71 T 14-10-2018 IPR006680 Amidohydrolase-related GO:0016787 DB29_04298 6978611b99aac5d0086530039a262646 434 SUPERFAMILY SSF51338 2 433 3.11E-29 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DB29_04298 6978611b99aac5d0086530039a262646 434 Gene3D G3DSA:2.30.40.10 4 425 1.9E-139 T 14-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 DB29_00043 ab476e04acc0dedf47f182c47cb3ecce 383 Gene3D G3DSA:3.40.630.30 1 278 4.2E-142 T 14-10-2018 DB29_00043 ab476e04acc0dedf47f182c47cb3ecce 383 SUPERFAMILY SSF55729 3 277 1.14E-72 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase DB29_00043 ab476e04acc0dedf47f182c47cb3ecce 383 Gene3D G3DSA:3.30.1050.10 279 373 4.2E-142 T 14-10-2018 IPR036527 SCP2 sterol-binding domain superfamily DB29_00043 ab476e04acc0dedf47f182c47cb3ecce 383 Gene3D G3DSA:3.40.630.30 124 383 4.2E-142 T 14-10-2018 DB29_00043 ab476e04acc0dedf47f182c47cb3ecce 383 Pfam PF13527 Acetyltransferase (GNAT) domain 2 124 2.8E-41 T 14-10-2018 DB29_00043 ab476e04acc0dedf47f182c47cb3ecce 383 Pfam PF13530 Sterol carrier protein domain 169 379 3.9E-58 T 14-10-2018 IPR025559 Enhanced intracellular survival protein domain DB29_00043 ab476e04acc0dedf47f182c47cb3ecce 383 SUPERFAMILY SSF55718 279 383 8.63E-28 T 14-10-2018 IPR036527 SCP2 sterol-binding domain superfamily DB29_03892 3dbd8fd4851c57bb0bc91f881dca322f 146 Gene3D G3DSA:1.20.1500.10 3 126 3.3E-29 T 14-10-2018 IPR023378 YheA/YmcA-like domain superfamily DB29_03892 3dbd8fd4851c57bb0bc91f881dca322f 146 SUPERFAMILY SSF158622 4 126 1.57E-32 T 14-10-2018 IPR023378 YheA/YmcA-like domain superfamily DB29_03892 3dbd8fd4851c57bb0bc91f881dca322f 146 Pfam PF06133 Control of competence regulator ComK, YlbF/YmcA 12 116 3.0E-19 T 14-10-2018 IPR010368 Control of competence regulator ComK, YlbF/YmcA DB29_03651 9b623245b08ac277239f9622d45e489a 102 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 100 8.3E-40 T 14-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB29_03651 9b623245b08ac277239f9622d45e489a 102 Pfam PF00829 Ribosomal prokaryotic L21 protein 2 100 9.7E-41 T 14-10-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB29_03651 9b623245b08ac277239f9622d45e489a 102 ProSitePatterns PS01169 Ribosomal protein L21 signature. 71 93 - T 14-10-2018 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 DB29_03651 9b623245b08ac277239f9622d45e489a 102 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 102 27.392 T 14-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB29_03651 9b623245b08ac277239f9622d45e489a 102 SUPERFAMILY SSF141091 1 100 5.62E-39 T 14-10-2018 IPR036164 L21-like superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB29_03406 f568b88d88688ba499ff50de0c9ff39d 126 ProDom PD067392 MEMBRANE UPF0344 TRANSMEMBRANE MW0851 BCE1257 SIMILAR YISL SAR0931 BCE33L1051 BT9727_1053 17 108 1.0E-44 T 14-10-2018 IPR010899 Protein of unknown function UPF0344 DB29_03406 f568b88d88688ba499ff50de0c9ff39d 126 Hamap MF_01536 UPF0344 protein . 14 126 14.592 T 14-10-2018 IPR010899 Protein of unknown function UPF0344 DB29_03406 f568b88d88688ba499ff50de0c9ff39d 126 Pfam PF07457 Protein of unknown function (DUF1516) 17 120 1.8E-27 T 14-10-2018 IPR010899 Protein of unknown function UPF0344 DB29_01840 9b65026176f33f0e1221cc0b2e490ef6 272 Gene3D G3DSA:3.40.630.30 133 267 9.1E-20 T 14-10-2018 DB29_01840 9b65026176f33f0e1221cc0b2e490ef6 272 Pfam PF00583 Acetyltransferase (GNAT) family 154 258 4.6E-13 T 14-10-2018 IPR000182 GNAT domain DB29_01840 9b65026176f33f0e1221cc0b2e490ef6 272 SUPERFAMILY SSF55729 132 263 3.6E-20 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase DB29_03004 b193751e424daa1e79c5dab2769833e1 303 SUPERFAMILY SSF161098 65 294 4.45E-56 T 14-10-2018 IPR035906 MetI-like superfamily DB29_03004 b193751e424daa1e79c5dab2769833e1 303 Gene3D G3DSA:1.10.3720.10 61 302 7.4E-67 T 14-10-2018 IPR035906 MetI-like superfamily DB29_03004 b193751e424daa1e79c5dab2769833e1 303 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 95 294 4.5E-16 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DB29_03331 aca30e9d5ffaf85c5a1af7596aca13e9 244 Gene3D G3DSA:3.40.50.150 27 243 5.7E-71 T 14-10-2018 DB29_03331 aca30e9d5ffaf85c5a1af7596aca13e9 244 Pfam PF08241 Methyltransferase domain 47 141 8.6E-21 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 DB29_03331 aca30e9d5ffaf85c5a1af7596aca13e9 244 SUPERFAMILY SSF53335 5 244 9.36E-43 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DB29_01653 155ad2013b1af8b32c689d3262352297 280 SUPERFAMILY SSF161098 12 280 2.75E-63 T 14-10-2018 IPR035906 MetI-like superfamily DB29_01653 155ad2013b1af8b32c689d3262352297 280 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 93 273 2.9E-18 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DB29_01653 155ad2013b1af8b32c689d3262352297 280 Gene3D G3DSA:1.10.3720.10 4 271 4.8E-60 T 14-10-2018 IPR035906 MetI-like superfamily DB29_03624 8afa32d6b7acf39e9e15ad2b8306323a 249 Gene3D G3DSA:3.40.50.10090 1 122 1.0E-26 T 14-10-2018 DB29_03624 8afa32d6b7acf39e9e15ad2b8306323a 249 SUPERFAMILY SSF69618 6 245 7.98E-59 T 14-10-2018 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 DB29_03624 8afa32d6b7acf39e9e15ad2b8306323a 249 Gene3D G3DSA:3.40.50.10090 134 247 1.4E-15 T 14-10-2018 DB29_03624 8afa32d6b7acf39e9e15ad2b8306323a 249 Pfam PF02602 Uroporphyrinogen-III synthase HemD 20 240 5.9E-55 T 14-10-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 DB29_01140 b41c84114a65b2cf4ef54088ed532cb6 127 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 7 122 17.13 T 14-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 DB29_01140 b41c84114a65b2cf4ef54088ed532cb6 127 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 9 117 5.8E-21 T 14-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 DB29_04015 c493de7b59046194260196301c22f43f 144 Pfam PF03963 Flagellar hook capping protein - N-terminal region 11 72 8.6E-22 T 14-10-2018 IPR005648 Flagellar hook capping protein DB29_02124 59706c036db64db34c811b225d657a73 485 Pfam PF02554 Carbon starvation protein CstA 5 165 2.7E-32 T 14-10-2018 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 DB29_02124 59706c036db64db34c811b225d657a73 485 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 319 427 3.1E-19 T 14-10-2018 IPR025299 CstA, C-terminal domain DB29_00915 9c2ff424be5a6d27c7d7ee6e07c4dc90 275 Pfam PF00005 ABC transporter 20 167 2.4E-34 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB29_00915 9c2ff424be5a6d27c7d7ee6e07c4dc90 275 SUPERFAMILY SSF52540 3 229 2.28E-62 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_00915 9c2ff424be5a6d27c7d7ee6e07c4dc90 275 SMART SM00382 28 217 3.4E-18 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_00915 9c2ff424be5a6d27c7d7ee6e07c4dc90 275 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB29_00915 9c2ff424be5a6d27c7d7ee6e07c4dc90 275 Gene3D G3DSA:3.40.50.300 4 256 1.5E-70 T 14-10-2018 DB29_00996 f6da90165a94e975ea9a8e18ab30ed95 276 Pfam PF02621 Menaquinone biosynthesis 1 260 4.9E-81 T 14-10-2018 IPR003773 Menaquinone biosynthesis enzyme DB29_00996 f6da90165a94e975ea9a8e18ab30ed95 276 Gene3D G3DSA:3.40.190.10 78 178 6.7E-99 T 14-10-2018 DB29_00996 f6da90165a94e975ea9a8e18ab30ed95 276 Gene3D G3DSA:3.40.190.10 3 261 6.7E-99 T 14-10-2018 DB29_00996 f6da90165a94e975ea9a8e18ab30ed95 276 Hamap MF_00996 1,4-dihydroxy-6-naphtoate synthase [mqnD]. 1 267 35.676 T 14-10-2018 IPR030869 1,4-dihydroxy-6-naphtoate synthase GO:0009234|GO:0016829 DB29_00996 f6da90165a94e975ea9a8e18ab30ed95 276 SUPERFAMILY SSF53850 2 266 1.09E-78 T 14-10-2018 DB29_02815 7c754539e8b54ce6d1dc5aa20f7d697c 321 Pfam PF13536 Putative multidrug resistance efflux transporter 38 301 7.6E-99 T 14-10-2018 IPR032713 Putative multidrug resistance efflux transporter DB29_02379 254ceab5d02fa9fbced5b10653dd3ba1 338 Gene3D G3DSA:3.90.25.10 193 328 5.2E-143 T 14-10-2018 DB29_02379 254ceab5d02fa9fbced5b10653dd3ba1 338 Gene3D G3DSA:3.40.50.720 3 273 5.2E-143 T 14-10-2018 DB29_02379 254ceab5d02fa9fbced5b10653dd3ba1 338 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 323 2.5E-58 T 14-10-2018 IPR016040 NAD(P)-binding domain DB29_02379 254ceab5d02fa9fbced5b10653dd3ba1 338 SUPERFAMILY SSF51735 1 331 9.04E-91 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_02379 254ceab5d02fa9fbced5b10653dd3ba1 338 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 3 332 1.5E-135 T 14-10-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 DB29_01666 8d4c92adcf2a8f40244793ecc026e5c3 280 Gene3D G3DSA:1.10.3720.10 1 268 3.0E-64 T 14-10-2018 IPR035906 MetI-like superfamily DB29_01666 8d4c92adcf2a8f40244793ecc026e5c3 280 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 94 273 2.4E-22 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DB29_01666 8d4c92adcf2a8f40244793ecc026e5c3 280 SUPERFAMILY SSF161098 4 280 1.15E-70 T 14-10-2018 IPR035906 MetI-like superfamily DB29_01311 61fcfd5cdb86d86bdb6e5d80a8295056 280 Gene3D G3DSA:2.60.120.200 26 280 7.9E-101 T 14-10-2018 DB29_01311 61fcfd5cdb86d86bdb6e5d80a8295056 280 SUPERFAMILY SSF49899 27 279 3.03E-82 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily DB29_01311 61fcfd5cdb86d86bdb6e5d80a8295056 280 Pfam PF00722 Glycosyl hydrolases family 16 74 276 3.9E-33 T 14-10-2018 IPR000757 Glycoside hydrolase family 16 GO:0004553|GO:0005975 DB29_02612 d53029b516b09f4eb46f5957196a2728 336 Pfam PF02733 Dak1 domain 18 330 1.9E-116 T 14-10-2018 IPR004006 DhaK domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 DB29_02612 d53029b516b09f4eb46f5957196a2728 336 Gene3D G3DSA:3.40.50.10440 12 187 4.9E-57 T 14-10-2018 DB29_02612 d53029b516b09f4eb46f5957196a2728 336 Gene3D G3DSA:3.30.1180.20 188 335 2.9E-50 T 14-10-2018 DB29_02612 d53029b516b09f4eb46f5957196a2728 336 SUPERFAMILY SSF82549 11 332 1.41E-110 T 14-10-2018 DB29_00156 1377f0de150aa8ad1ca454be3806bef6 399 Pfam PF01578 Cytochrome C assembly protein 272 396 5.8E-26 T 14-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 DB29_00156 1377f0de150aa8ad1ca454be3806bef6 399 TIGRFAM TIGR03144 cytochr_II_ccsB: cytochrome c-type biogenesis protein CcsB 53 399 1.7E-63 T 14-10-2018 IPR017562 Cytochrome c-type biogenesis protein CcsA GO:0017004 DB29_00681 a85b10dcde25cee6ae0b2d1b8fdf3a7e 345 SUPERFAMILY SSF141986 175 336 1.57E-25 T 14-10-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily DB29_00681 a85b10dcde25cee6ae0b2d1b8fdf3a7e 345 SUPERFAMILY SSF52317 3 168 2.2E-40 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like DB29_00681 a85b10dcde25cee6ae0b2d1b8fdf3a7e 345 Gene3D G3DSA:3.40.50.10740 2 166 6.9E-59 T 14-10-2018 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal DB29_00681 a85b10dcde25cee6ae0b2d1b8fdf3a7e 345 PIRSF PIRSF028757 4 345 4.1E-58 T 14-10-2018 IPR003507 Peptidase family S66 DB29_00681 a85b10dcde25cee6ae0b2d1b8fdf3a7e 345 Gene3D G3DSA:3.50.30.60 168 345 5.7E-50 T 14-10-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily DB29_00681 a85b10dcde25cee6ae0b2d1b8fdf3a7e 345 Pfam PF02016 LD-carboxypeptidase 16 330 5.1E-66 T 14-10-2018 IPR003507 Peptidase family S66 DB29_01952 e8cf06e42c881f7b07deea110f74adec 440 Pfam PF03600 Citrate transporter 16 384 1.7E-35 T 14-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 DB29_01952 e8cf06e42c881f7b07deea110f74adec 440 TIGRFAM TIGR00784 citMHS: citrate transporter 4 439 2.3E-91 T 14-10-2018 IPR014738 Citrate transporter GO:0015137|GO:0015746 DB29_00781 7e152e70a3203463d2fd7ad0b7bb2f86 140 Gene3D G3DSA:1.20.1290.10 65 139 5.5E-5 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 DB29_00781 7e152e70a3203463d2fd7ad0b7bb2f86 140 Gene3D G3DSA:1.20.1290.10 2 64 3.7E-8 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 DB29_00781 7e152e70a3203463d2fd7ad0b7bb2f86 140 SUPERFAMILY SSF69118 14 134 1.73E-23 T 14-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 DB29_01200 1e888506dbcc6d3d3b7fb1599eeaf2b8 627 Pfam PF00884 Sulfatase 245 533 1.7E-34 T 14-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 DB29_01200 1e888506dbcc6d3d3b7fb1599eeaf2b8 627 PIRSF PIRSF005091 1 618 1.3E-178 T 14-10-2018 IPR012160 Lipoteichoic acid synthase-like DB29_01200 1e888506dbcc6d3d3b7fb1599eeaf2b8 627 Gene3D G3DSA:3.40.720.10 238 544 5.3E-74 T 14-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 DB29_01200 1e888506dbcc6d3d3b7fb1599eeaf2b8 627 SUPERFAMILY SSF53649 243 617 1.28E-73 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 DB29_00150 fd0e0244c1181f70b76f1ec3f06df09f 183 SUPERFAMILY SSF89028 1 174 1.96E-50 T 14-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 DB29_00150 fd0e0244c1181f70b76f1ec3f06df09f 183 Pfam PF01923 Cobalamin adenosyltransferase 3 161 1.1E-46 T 14-10-2018 IPR016030 Cobalamin adenosyltransferase-like KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 DB29_00150 fd0e0244c1181f70b76f1ec3f06df09f 183 ProDom PD007457 TRANSFERASE ADENOSYLTRANSFERASE COBALAMIN ATP:COBIALAMIN ADENOSYLTRANSFERASE PDUO TYPE RELATED ACIDURIA YVQK 9 173 9.0E-94 T 14-10-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 DB29_00150 fd0e0244c1181f70b76f1ec3f06df09f 183 TIGRFAM TIGR00636 PduO_Nterm: ATP:cob(I)alamin adenosyltransferase 4 173 8.2E-45 T 14-10-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 DB29_00150 fd0e0244c1181f70b76f1ec3f06df09f 183 Gene3D G3DSA:1.20.1200.10 12 183 6.0E-51 T 14-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 DB29_00444 ec5641b6873693718c82e83266360f16 369 SUPERFAMILY SSF56601 26 365 1.53E-80 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like DB29_00444 ec5641b6873693718c82e83266360f16 369 Gene3D G3DSA:3.40.710.10 18 367 4.6E-80 T 14-10-2018 DB29_00444 ec5641b6873693718c82e83266360f16 369 Pfam PF00144 Beta-lactamase 31 356 9.2E-65 T 14-10-2018 IPR001466 Beta-lactamase-related DB29_00939 8341b9f5870d4e472d792f7c612321a1 408 Pfam PF12698 ABC-2 family transporter protein 16 398 2.4E-36 T 14-10-2018 DB29_01182 f91583144ad0e164956ee4b984d384b6 154 SMART SM00731 4 145 2.6E-57 T 14-10-2018 IPR006640 SprT-like DB29_01182 f91583144ad0e164956ee4b984d384b6 154 Hamap MF_00745 Protein SprT-like. 4 145 38.632 T 14-10-2018 IPR023524 Uncharacterised protein family SprT-like DB29_01182 f91583144ad0e164956ee4b984d384b6 154 Pfam PF17283 SprT-like zinc ribbon domain 112 145 7.6E-9 T 14-10-2018 IPR035240 SprT-like, zinc ribbon domain DB29_01182 f91583144ad0e164956ee4b984d384b6 154 Pfam PF10263 SprT-like family 7 97 3.7E-15 T 14-10-2018 IPR006640 SprT-like DB29_02410 a33c59d9afbd91b29975237055e17aeb 193 SUPERFAMILY SSF53098 106 190 1.33E-8 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily DB29_02410 a33c59d9afbd91b29975237055e17aeb 193 Pfam PF00665 Integrase core domain 110 191 3.7E-8 T 14-10-2018 IPR001584 Integrase, catalytic core GO:0015074 DB29_02504 fee2fd88782106568cd4be9b95d207b5 474 PIRSF PIRSF005690 1 474 7.1E-141 T 14-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 DB29_02504 fee2fd88782106568cd4be9b95d207b5 474 Pfam PF03323 Bacillus/Clostridium GerA spore germination protein 14 471 2.1E-139 T 14-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 DB29_00615 494fab38ad6840315c2101a443ab4f60 220 Pfam PF00165 Bacterial regulatory helix-turn-helix proteins, AraC family 166 200 1.4E-6 T 14-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 DB29_00615 494fab38ad6840315c2101a443ab4f60 220 Gene3D G3DSA:1.10.10.60 152 220 1.7E-8 T 14-10-2018 DB29_02161 1a00b78f5c75d335ecd0c4cf5fa047b4 89 SUPERFAMILY SSF57716 2 89 4.63E-31 T 14-10-2018 DB29_02161 1a00b78f5c75d335ecd0c4cf5fa047b4 89 Pfam PF00253 Ribosomal protein S14p/S29e 36 88 1.1E-26 T 14-10-2018 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 DB29_02161 1a00b78f5c75d335ecd0c4cf5fa047b4 89 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 89 24.791 T 14-10-2018 IPR023036 Ribosomal protein S14, bacterial/plastid DB29_02161 1a00b78f5c75d335ecd0c4cf5fa047b4 89 ProSitePatterns PS00527 Ribosomal protein S14 signature. 50 73 - T 14-10-2018 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB29_02161 1a00b78f5c75d335ecd0c4cf5fa047b4 89 Gene3D G3DSA:4.10.830.10 29 89 3.8E-24 T 14-10-2018 DB29_02401 45b50e9e37face4820c68c4568d886ba 591 Pfam PF14436 Bacterial EndoU nuclease 457 587 2.5E-25 T 14-10-2018 IPR029501 Bacterial EndoU nuclease DB29_02401 45b50e9e37face4820c68c4568d886ba 591 Pfam PF04740 LXG domain of WXG superfamily 3 197 7.0E-51 T 14-10-2018 IPR006829 LXG domain DB29_04096 8861b683a9bfe12f95c237cc578a738c 77 SUPERFAMILY SSF50182 6 64 7.98E-24 T 14-10-2018 IPR010920 LSM domain superfamily DB29_04096 8861b683a9bfe12f95c237cc578a738c 77 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 1 65 28.807 T 14-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 DB29_04096 8861b683a9bfe12f95c237cc578a738c 77 Pfam PF17209 Hfq protein 7 69 1.3E-33 T 14-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 DB29_04096 8861b683a9bfe12f95c237cc578a738c 77 Gene3D G3DSA:2.30.30.100 1 74 8.7E-35 T 14-10-2018 DB29_04096 8861b683a9bfe12f95c237cc578a738c 77 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 6 65 5.7E-32 T 14-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 DB29_02766 f8f8b47490efa592b9c5316db4d069bd 287 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 83 282 2.3E-17 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DB29_02766 f8f8b47490efa592b9c5316db4d069bd 287 SUPERFAMILY SSF161098 49 275 6.54E-53 T 14-10-2018 IPR035906 MetI-like superfamily DB29_02766 f8f8b47490efa592b9c5316db4d069bd 287 Gene3D G3DSA:1.10.3720.10 45 286 4.2E-61 T 14-10-2018 IPR035906 MetI-like superfamily DB29_02671 1a7b7bc4592a0bc8bb77360e32766825 426 Pfam PF01547 Bacterial extracellular solute-binding protein 55 345 1.8E-29 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein DB29_02671 1a7b7bc4592a0bc8bb77360e32766825 426 Gene3D G3DSA:3.40.190.10 154 420 6.2E-85 T 14-10-2018 DB29_02671 1a7b7bc4592a0bc8bb77360e32766825 426 Gene3D G3DSA:3.40.190.10 56 389 6.2E-85 T 14-10-2018 DB29_02671 1a7b7bc4592a0bc8bb77360e32766825 426 SUPERFAMILY SSF53850 19 425 5.49E-64 T 14-10-2018 DB29_00618 20e37ec02b4c2a89faa327c82530d5b8 180 SUPERFAMILY SSF53597 1 178 6.81E-24 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 DB29_00618 20e37ec02b4c2a89faa327c82530d5b8 180 Gene3D G3DSA:3.40.430.10 1 179 2.0E-35 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 DB29_00618 20e37ec02b4c2a89faa327c82530d5b8 180 Pfam PF01872 RibD C-terminal domain 78 174 6.0E-10 T 14-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 DB29_00618 20e37ec02b4c2a89faa327c82530d5b8 180 Pfam PF01872 RibD C-terminal domain 3 57 3.5E-5 T 14-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 DB29_03144 0ea2082da06cb404ec73d7a050248c26 187 Pfam PF13376 Bacteriocin-protection, YdeI or OmpD-Associated 113 172 2.5E-11 T 14-10-2018 DB29_03252 ac5aaa9a47dfb8db07593f922919f39c 252 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 1 252 47.43 T 14-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 DB29_03252 ac5aaa9a47dfb8db07593f922919f39c 252 Gene3D G3DSA:3.20.20.70 1 252 1.5E-101 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DB29_03252 ac5aaa9a47dfb8db07593f922919f39c 252 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 1 252 9.5E-111 T 14-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 DB29_03252 ac5aaa9a47dfb8db07593f922919f39c 252 SUPERFAMILY SSF51366 1 251 3.3E-77 T 14-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 DB29_03252 ac5aaa9a47dfb8db07593f922919f39c 252 Pfam PF00977 Histidine biosynthesis protein 5 235 4.7E-84 T 14-10-2018 IPR006062 Histidine biosynthesis GO:0000105 DB29_02135 ad1a0ac28a94542bf77bf705151b8494 159 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 23 149 3.6E-28 T 14-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ DB29_03978 e886efa099afead9331cca8ee13e01eb 127 SUPERFAMILY SSF52540 3 120 1.54E-27 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_03978 e886efa099afead9331cca8ee13e01eb 127 Pfam PF02463 RecF/RecN/SMC N terminal domain 28 111 1.1E-32 T 14-10-2018 IPR003395 RecF/RecN/SMC, N-terminal DB29_03978 e886efa099afead9331cca8ee13e01eb 127 Gene3D G3DSA:3.40.50.300 1 126 2.5E-44 T 14-10-2018 DB29_04382 14f30a156236b9f0dd05f862d603d408 47 Gene3D G3DSA:1.10.150.20 1 47 5.1E-11 T 14-10-2018 DB29_04382 14f30a156236b9f0dd05f862d603d408 47 SUPERFAMILY SSF47789 2 46 2.35E-9 T 14-10-2018 DB29_00822 ebde68c5571f05a3de403e6eba3695b2 309 SUPERFAMILY SSF52540 4 231 1.62E-55 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_00822 ebde68c5571f05a3de403e6eba3695b2 309 SMART SM00382 29 210 3.9E-11 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_00822 ebde68c5571f05a3de403e6eba3695b2 309 Gene3D G3DSA:3.40.50.300 1 245 4.7E-56 T 14-10-2018 DB29_00822 ebde68c5571f05a3de403e6eba3695b2 309 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB29_00822 ebde68c5571f05a3de403e6eba3695b2 309 Pfam PF00005 ABC transporter 21 161 2.2E-30 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB29_01479 728140a223d092d5a4e59343d83f1a98 226 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 48 225 7.5E-20 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DB29_01479 728140a223d092d5a4e59343d83f1a98 226 SUPERFAMILY SSF161098 16 209 1.23E-43 T 14-10-2018 IPR035906 MetI-like superfamily DB29_01479 728140a223d092d5a4e59343d83f1a98 226 Gene3D G3DSA:1.10.3720.10 12 226 1.2E-46 T 14-10-2018 IPR035906 MetI-like superfamily DB29_03105 091d790b077f10c8a3e795841cbe8287 82 ProDom PD058324 UPF0349 LMO2392 BLI03401/BL03152 SA0800 SAR0901 LIN2491 SERP0525 GK2958 BT9727_4649 BC4937 5 74 6.0E-35 T 14-10-2018 DB29_03105 091d790b077f10c8a3e795841cbe8287 82 Pfam PF07293 Protein of unknown function (DUF1450) 4 74 9.5E-25 T 14-10-2018 IPR009910 Protein of unknown function DUF1450 DB29_01367 689ab1849b7dcd2fde0b7326f7c0eec7 503 PIRSF PIRSF005690 12 498 3.4E-174 T 14-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 DB29_01367 689ab1849b7dcd2fde0b7326f7c0eec7 503 Pfam PF03323 Bacillus/Clostridium GerA spore germination protein 28 484 2.2E-177 T 14-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 DB29_00101 11bb22dde777af994b530f38e7b31e39 75 Pfam PF02081 Tryptophan RNA-binding attenuator protein 4 71 1.4E-39 T 14-10-2018 IPR023558 Tryptophan RNA-binding attenuator protein domain DB29_00101 11bb22dde777af994b530f38e7b31e39 75 PRINTS PR00687 Tryptophan RNA-binding attenuator protein signature 7 24 1.1E-32 T 14-10-2018 IPR000824 Transcription attenuation protein MtrB GO:0003723|GO:0006353|GO:0006355 DB29_00101 11bb22dde777af994b530f38e7b31e39 75 PRINTS PR00687 Tryptophan RNA-binding attenuator protein signature 24 40 1.1E-32 T 14-10-2018 IPR000824 Transcription attenuation protein MtrB GO:0003723|GO:0006353|GO:0006355 DB29_00101 11bb22dde777af994b530f38e7b31e39 75 PRINTS PR00687 Tryptophan RNA-binding attenuator protein signature 40 56 1.1E-32 T 14-10-2018 IPR000824 Transcription attenuation protein MtrB GO:0003723|GO:0006353|GO:0006355 DB29_00101 11bb22dde777af994b530f38e7b31e39 75 PRINTS PR00687 Tryptophan RNA-binding attenuator protein signature 56 72 1.1E-32 T 14-10-2018 IPR000824 Transcription attenuation protein MtrB GO:0003723|GO:0006353|GO:0006355 DB29_00101 11bb22dde777af994b530f38e7b31e39 75 Hamap MF_00798 Transcription attenuation protein MtrB [mtrB]. 1 71 27.88 T 14-10-2018 IPR000824 Transcription attenuation protein MtrB GO:0003723|GO:0006353|GO:0006355 DB29_00101 11bb22dde777af994b530f38e7b31e39 75 SUPERFAMILY SSF51219 5 72 1.65E-35 T 14-10-2018 IPR016031 Tryptophan RNA-binding attenuator protein-like domain superfamily DB29_00101 11bb22dde777af994b530f38e7b31e39 75 Gene3D G3DSA:2.60.40.50 5 74 1.2E-41 T 14-10-2018 IPR016031 Tryptophan RNA-binding attenuator protein-like domain superfamily DB29_04172 305c8bf3fde18a81d79a6a5c2afc9fc5 210 SUPERFAMILY SSF53955 11 191 4.78E-30 T 14-10-2018 IPR023346 Lysozyme-like domain superfamily DB29_04172 305c8bf3fde18a81d79a6a5c2afc9fc5 210 Gene3D G3DSA:1.10.530.10 40 199 1.8E-21 T 14-10-2018 DB29_03564 d14ac1c74b95b8c846eb653dc9f7498a 111 Pfam PF04341 Protein of unknown function, DUF485 15 98 2.4E-23 T 14-10-2018 IPR007436 Protein of unknown function DUF485 DB29_00315 265d021e555a006fa42a1636609b9e16 154 Pfam PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 22 149 1.1E-37 T 14-10-2018 IPR003791 Protein of unknown function UPF0178 DB29_00315 265d021e555a006fa42a1636609b9e16 154 Hamap MF_00489 UPF0178 protein YaiI [yaiI]. 7 151 27.078 T 14-10-2018 IPR003791 Protein of unknown function UPF0178 DB29_02921 04a4c269c3c5cc25e8cc54db38f6ae02 334 Gene3D G3DSA:3.40.190.170 34 334 1.8E-84 T 14-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily DB29_02921 04a4c269c3c5cc25e8cc54db38f6ae02 334 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 38 317 2.7E-67 T 14-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 DB29_02921 04a4c269c3c5cc25e8cc54db38f6ae02 334 PIRSF PIRSF006470 3 332 1.5E-77 T 14-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 DB29_02921 04a4c269c3c5cc25e8cc54db38f6ae02 334 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 41 293 5.4E-57 T 14-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 DB29_04220 65cfe3b3bc73c9c417b60350d98e973f 396 Pfam PF12686 Protein of unknown function (DUF3800) 155 365 1.3E-9 T 14-10-2018 IPR024524 Protein of unknown function DUF3800 DB29_02179 989183ee0d32ae297ea899a85d71d82b 89 SUPERFAMILY SSF55248 2 88 6.02E-25 T 14-10-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 DB29_02179 989183ee0d32ae297ea899a85d71d82b 89 Pfam PF01329 Pterin 4 alpha carbinolamine dehydratase 3 85 6.6E-21 T 14-10-2018 IPR001533 Pterin 4 alpha carbinolamine dehydratase GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 DB29_02179 989183ee0d32ae297ea899a85d71d82b 89 Gene3D G3DSA:3.30.1360.20 1 89 9.9E-25 T 14-10-2018 IPR036428 Pterin 4 alpha carbinolamine dehydratase superfamily GO:0006729|GO:0008124 KEGG: 00790+4.2.1.96|MetaCyc: PWY-7158 DB29_04352 cd5e23add99c75371300f8afcdee95c9 188 Pfam PF06908 Protein of unknown function (DUF1273) 11 173 1.1E-62 T 14-10-2018 IPR010697 Protein of unknown function DUF1273 DB29_04352 cd5e23add99c75371300f8afcdee95c9 188 PIRSF PIRSF021290 8 183 6.4E-68 T 14-10-2018 IPR010697 Protein of unknown function DUF1273 DB29_04352 cd5e23add99c75371300f8afcdee95c9 188 Gene3D G3DSA:3.40.50.450 7 184 4.8E-61 T 14-10-2018 DB29_04352 cd5e23add99c75371300f8afcdee95c9 188 Hamap MF_01575 UPF0398 protein . 8 181 33.366 T 14-10-2018 IPR010697 Protein of unknown function DUF1273 DB29_04352 cd5e23add99c75371300f8afcdee95c9 188 SUPERFAMILY SSF102405 9 179 1.01E-56 T 14-10-2018 DB29_02362 76fe766dc53e7247bf4b1637afab4a2b 120 ProDom PD053619 EPUA PRECURSOR SIGNAL PEPTIDE YFDG EXTRACELLULAR OB2955 BH3736 GBS0884 SMU.1524C 71 115 4.0E-19 T 14-10-2018 IPR024596 DNA-directed RNA polymerase subunit beta/EpuA DB29_02362 76fe766dc53e7247bf4b1637afab4a2b 120 Pfam PF11772 DNA-directed RNA polymerase subunit beta 73 119 6.8E-18 T 14-10-2018 IPR024596 DNA-directed RNA polymerase subunit beta/EpuA DB29_03262 ef02190a4026c0837531ff3b7b95f418 328 Pfam PF01933 Uncharacterised protein family UPF0052 5 290 3.7E-107 T 14-10-2018 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 DB29_03262 ef02190a4026c0837531ff3b7b95f418 328 Hamap MF_00973 Gluconeogenesis factor. 1 315 35.777 T 14-10-2018 IPR010119 Gluconeogenesis factor DB29_03262 ef02190a4026c0837531ff3b7b95f418 328 SUPERFAMILY SSF142338 2 310 1.57E-106 T 14-10-2018 DB29_03262 ef02190a4026c0837531ff3b7b95f418 328 Gene3D G3DSA:3.40.50.12300 1 319 2.6E-133 T 14-10-2018 IPR038136 Gluconeogenesis factor superfamily DB29_03262 ef02190a4026c0837531ff3b7b95f418 328 TIGRFAM TIGR01826 CofD_related: conserved hypothetical protein 5 313 4.6E-120 T 14-10-2018 IPR010119 Gluconeogenesis factor DB29_02597 05b8de5cb21ff9f707d7d895eb2d1ef9 365 SUPERFAMILY SSF48452 210 297 1.8E-6 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DB29_02597 05b8de5cb21ff9f707d7d895eb2d1ef9 365 SMART SM00028 173 206 120.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DB29_02597 05b8de5cb21ff9f707d7d895eb2d1ef9 365 SMART SM00028 250 283 450.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DB29_02597 05b8de5cb21ff9f707d7d895eb2d1ef9 365 SMART SM00028 211 244 38.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DB29_02597 05b8de5cb21ff9f707d7d895eb2d1ef9 365 SMART SM00028 93 126 230.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DB29_02597 05b8de5cb21ff9f707d7d895eb2d1ef9 365 SMART SM00028 133 166 21.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DB29_02597 05b8de5cb21ff9f707d7d895eb2d1ef9 365 Pfam PF13424 Tetratricopeptide repeat 212 278 3.7E-8 T 14-10-2018 DB29_02597 05b8de5cb21ff9f707d7d895eb2d1ef9 365 Gene3D G3DSA:1.25.40.10 1 362 1.7E-81 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DB29_02597 05b8de5cb21ff9f707d7d895eb2d1ef9 365 SUPERFAMILY SSF48452 96 239 2.18E-16 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DB29_03209 43256db862ecf3f59d662a1f08ca2746 280 Pfam PF02645 Uncharacterised protein, DegV family COG1307 3 280 1.5E-93 T 14-10-2018 IPR003797 DegV DB29_03209 43256db862ecf3f59d662a1f08ca2746 280 TIGRFAM TIGR00762 DegV: EDD domain protein, DegV family 5 280 5.8E-101 T 14-10-2018 IPR003797 DegV DB29_03209 43256db862ecf3f59d662a1f08ca2746 280 Gene3D G3DSA:3.40.50.10170 1 154 7.7E-49 T 14-10-2018 DB29_03209 43256db862ecf3f59d662a1f08ca2746 280 SUPERFAMILY SSF82549 1 280 2.88E-89 T 14-10-2018 DB29_03209 43256db862ecf3f59d662a1f08ca2746 280 Gene3D G3DSA:3.30.1180.10 155 280 2.4E-42 T 14-10-2018 DB29_01445 5cb580a0d31f759927d4a1e62637dcba 316 Pfam PF02073 Thermophilic metalloprotease (M29) 55 280 5.0E-10 T 14-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 DB29_01445 5cb580a0d31f759927d4a1e62637dcba 316 SUPERFAMILY SSF144052 4 315 1.96E-55 T 14-10-2018 DB29_04250 e8104b6ac3cafea076d4918b5e904a5e 90 Pfam PF06946 Bacteriophage A118-like holin, Hol118 2 81 1.3E-9 T 14-10-2018 IPR009708 Bacteriophage A118, holin DB29_02973 390868814701a0c563e7fb0acdd7a825 169 SUPERFAMILY SSF55729 1 161 3.9E-27 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase DB29_02973 390868814701a0c563e7fb0acdd7a825 169 Gene3D G3DSA:3.40.630.30 1 166 1.1E-37 T 14-10-2018 DB29_02973 390868814701a0c563e7fb0acdd7a825 169 Pfam PF00583 Acetyltransferase (GNAT) family 45 138 1.2E-13 T 14-10-2018 IPR000182 GNAT domain DB29_01742 c826831a2c03d036b3715db1ecdccd90 174 Pfam PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) 5 172 1.3E-46 T 14-10-2018 IPR010708 5'(3')-deoxyribonucleotidase GO:0008253|GO:0009264 Reactome: R-HSA-73621 DB29_01742 c826831a2c03d036b3715db1ecdccd90 174 SUPERFAMILY SSF56784 1 173 8.03E-35 T 14-10-2018 IPR036412 HAD-like superfamily DB29_01742 c826831a2c03d036b3715db1ecdccd90 174 Gene3D G3DSA:3.40.50.1000 5 169 7.1E-63 T 14-10-2018 IPR023214 HAD superfamily DB29_01742 c826831a2c03d036b3715db1ecdccd90 174 Gene3D G3DSA:1.10.40.40 16 64 7.1E-63 T 14-10-2018 DB29_01449 6a4528d260706ed8c6edd7617fd14235 526 Pfam PF03169 OPT oligopeptide transporter protein 171 523 6.0E-48 T 14-10-2018 IPR004813 Oligopeptide transporter, OPT superfamily GO:0055085 DB29_01449 6a4528d260706ed8c6edd7617fd14235 526 Pfam PF03169 OPT oligopeptide transporter protein 8 167 3.6E-19 T 14-10-2018 IPR004813 Oligopeptide transporter, OPT superfamily GO:0055085 DB29_03489 85f48264537e790a3d074290936ae649 210 PIRSF PIRSF021278 2 210 6.9E-88 T 14-10-2018 IPR024699 Acetoin utilization protein AcuA GO:0019152|GO:0045150 DB29_03489 85f48264537e790a3d074290936ae649 210 Pfam PF00583 Acetyltransferase (GNAT) family 52 121 2.7E-4 T 14-10-2018 IPR000182 GNAT domain DB29_03489 85f48264537e790a3d074290936ae649 210 SUPERFAMILY SSF55729 44 123 1.08E-8 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase DB29_03489 85f48264537e790a3d074290936ae649 210 Gene3D G3DSA:3.40.630.30 2 210 8.7E-84 T 14-10-2018 DB29_03408 3000257625f2b8aca0f51ffb973618fe 157 Pfam PF06695 Putative small multi-drug export protein 21 139 3.1E-18 T 14-10-2018 IPR009577 Putative small multi-drug export DB29_02244 fca34a252f96b371aaa7c04af772a285 172 Gene3D G3DSA:2.40.50.140 89 168 2.2E-26 T 14-10-2018 DB29_02003 c3b1b4b1fe9224a2bd97d86552315454 275 Pfam PF04468 PSP1 C-terminal conserved region 61 146 1.7E-31 T 14-10-2018 IPR007557 PSP1, C-terminal DB29_01371 3a6ce8db74cf1ace58b2f93189d6b6b0 193 Gene3D G3DSA:2.60.40.1240 70 188 4.8E-25 T 14-10-2018 IPR029050 Immunoprotective extracellular, immunoglobulin-like domain superfamily DB29_01371 3a6ce8db74cf1ace58b2f93189d6b6b0 193 Pfam PF11611 Domain of unknown function (DUF4352) 70 186 8.0E-27 T 14-10-2018 IPR029051 Domain of unknown function DUF4352 DB29_03047 6d21eda8bb895ed49b465c2b376c4ef5 296 Pfam PF02517 CAAX protease self-immunity 141 242 4.7E-6 T 14-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 DB29_01286 1aa41f805e8f72da34812eb6fdae1b12 244 Pfam PF14256 YwiC-like protein 8 134 8.0E-37 T 14-10-2018 IPR025576 YwiC-like protein DB29_03300 38697720c40d99ca9052a115a96a3118 459 Pfam PF07670 Nucleoside recognition 141 242 1.8E-8 T 14-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 DB29_00135 15361708e9f0b2aa4add10f3f7ffd281 85 SMART SM00530 5 60 8.4E-10 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DB29_00135 15361708e9f0b2aa4add10f3f7ffd281 85 SUPERFAMILY SSF47413 4 64 9.38E-15 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DB29_00135 15361708e9f0b2aa4add10f3f7ffd281 85 Gene3D G3DSA:1.10.260.40 2 85 1.1E-14 T 14-10-2018 DB29_00135 15361708e9f0b2aa4add10f3f7ffd281 85 Pfam PF01381 Helix-turn-helix 6 60 2.6E-10 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DB29_03599 1a3b8f3c8fc14146b8fc340e62f53a00 377 SMART SM00909 270 359 6.5E-19 T 14-10-2018 IPR019606 GerMN domain DB29_03599 1a3b8f3c8fc14146b8fc340e62f53a00 377 SMART SM00909 119 210 1.0E-19 T 14-10-2018 IPR019606 GerMN domain DB29_03599 1a3b8f3c8fc14146b8fc340e62f53a00 377 Pfam PF10646 Sporulation and spore germination 96 206 7.6E-18 T 14-10-2018 IPR019606 GerMN domain DB29_03599 1a3b8f3c8fc14146b8fc340e62f53a00 377 Pfam PF10646 Sporulation and spore germination 243 353 2.5E-15 T 14-10-2018 IPR019606 GerMN domain DB29_01025 78fe9591a0db2b234b5e082e7d8297fd 167 Pfam PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) 40 163 3.6E-25 T 14-10-2018 IPR019076 Sporulation lipoprotein YhcN/YlaJ-like DB29_01025 78fe9591a0db2b234b5e082e7d8297fd 167 TIGRFAM TIGR02898 spore_YhcN_YlaJ: sporulation lipoprotein, YhcN/YlaJ family 7 164 1.1E-58 T 14-10-2018 IPR014247 Sporulation lipoprotein YhcN/YlaJ GO:0030435 DB29_00164 f68dfddc0b99cd1b81de6de5829f6a30 338 SUPERFAMILY SSF53901 49 283 1.52E-14 T 14-10-2018 IPR016039 Thiolase-like GO:0003824 DB29_00164 f68dfddc0b99cd1b81de6de5829f6a30 338 PIRSF PIRSF011570 1 335 5.1E-157 T 14-10-2018 IPR010894 Stage V sporulation AD DB29_00164 f68dfddc0b99cd1b81de6de5829f6a30 338 TIGRFAM TIGR02845 spore_V_AD: stage V sporulation protein AD 5 332 3.8E-150 T 14-10-2018 IPR010894 Stage V sporulation AD DB29_00164 f68dfddc0b99cd1b81de6de5829f6a30 338 Gene3D G3DSA:3.40.47.40 1 338 1.1E-148 T 14-10-2018 IPR038369 Stage V sporulation AD superfamily DB29_00164 f68dfddc0b99cd1b81de6de5829f6a30 338 Pfam PF07451 Stage V sporulation protein AD (SpoVAD) 4 332 5.9E-157 T 14-10-2018 IPR010894 Stage V sporulation AD DB29_02363 93cf17ea5c1f3efe9fea2f369b605eb4 504 PIRSF PIRSF005690 9 493 7.3E-146 T 14-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 DB29_02363 93cf17ea5c1f3efe9fea2f369b605eb4 504 Pfam PF03323 Bacillus/Clostridium GerA spore germination protein 25 478 1.4E-156 T 14-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 DB29_00736 32930e8a66ce79e01e7444aa01a4ee79 267 SUPERFAMILY SSF161098 72 258 3.27E-33 T 14-10-2018 IPR035906 MetI-like superfamily DB29_00736 32930e8a66ce79e01e7444aa01a4ee79 267 TIGRFAM TIGR01097 PhnE: phosphonate ABC transporter, permease protein PhnE 13 266 1.6E-78 T 14-10-2018 IPR005769 ABC transporter, permease PhnE/PtxC GO:0005887|GO:0015604|GO:0015716 DB29_00736 32930e8a66ce79e01e7444aa01a4ee79 267 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 95 263 5.3E-13 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DB29_00736 32930e8a66ce79e01e7444aa01a4ee79 267 Gene3D G3DSA:1.10.3720.10 71 266 1.1E-31 T 14-10-2018 IPR035906 MetI-like superfamily DB29_04345 e95fd84b1d6d23ade30bf8c5ea9ee7bf 376 Gene3D G3DSA:3.30.300.210 214 367 3.5E-31 T 14-10-2018 IPR038501 Spore germination GerAC superfamily DB29_04345 e95fd84b1d6d23ade30bf8c5ea9ee7bf 376 Pfam PF05504 Spore germination B3/ GerAC like, C-terminal 197 363 1.5E-24 T 14-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 DB29_04345 e95fd84b1d6d23ade30bf8c5ea9ee7bf 376 TIGRFAM TIGR02887 spore_ger_x_C: germination protein, Ger(x)C family 1 365 3.8E-93 T 14-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 DB29_03570 02f958cbb644b0d3bb015cce356efff3 69 TIGRFAM TIGR03092 SASP_sspI: small, acid-soluble spore protein I 4 67 4.3E-33 T 14-10-2018 IPR017525 Small, acid-soluble spore protein I GO:0030436 DB29_03570 02f958cbb644b0d3bb015cce356efff3 69 Pfam PF14098 Small, acid-soluble spore protein I 3 67 4.0E-28 T 14-10-2018 IPR017525 Small, acid-soluble spore protein I GO:0030436 DB29_03570 02f958cbb644b0d3bb015cce356efff3 69 Hamap MF_00669 Small, acid-soluble spore protein I [sspI]. 1 68 20.471 T 14-10-2018 IPR017525 Small, acid-soluble spore protein I GO:0030436 DB29_03652 91c4f20fa6fbd22db4f676db8c635f02 107 SUPERFAMILY SSF118010 3 104 2.75E-26 T 14-10-2018 IPR036764 Cysteine protease Prp superfamily DB29_03652 91c4f20fa6fbd22db4f676db8c635f02 107 Gene3D G3DSA:3.30.70.1490 1 106 5.8E-30 T 14-10-2018 IPR036764 Cysteine protease Prp superfamily DB29_03652 91c4f20fa6fbd22db4f676db8c635f02 107 Pfam PF04327 Cysteine protease Prp 4 100 8.0E-20 T 14-10-2018 IPR007422 Cysteine protease Prp DB29_01370 0889274c5d8a43a3701edb31c3a0c6a2 383 Pfam PF03845 Spore germination protein 9 320 3.9E-38 T 14-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 DB29_01370 0889274c5d8a43a3701edb31c3a0c6a2 383 TIGRFAM TIGR00912 2A0309: spore germination protein (amino acid permease) 9 366 2.7E-51 T 14-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 DB29_00857 479184310f4f61c710e1acbb5819bbdc 321 SUPERFAMILY SSF161098 75 307 5.76E-50 T 14-10-2018 IPR035906 MetI-like superfamily DB29_00857 479184310f4f61c710e1acbb5819bbdc 321 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 105 312 1.1E-15 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DB29_00857 479184310f4f61c710e1acbb5819bbdc 321 Gene3D G3DSA:1.10.3720.10 71 321 2.4E-61 T 14-10-2018 IPR035906 MetI-like superfamily DB29_01956 f9e665702c73872a828442e2e9e7e2a0 104 PIRSF PIRSF011576 1 104 3.7E-47 T 14-10-2018 IPR012504 Sporulation protein YabP DB29_01956 f9e665702c73872a828442e2e9e7e2a0 104 Pfam PF07873 YabP family 21 86 2.0E-23 T 14-10-2018 IPR022476 Sporulation protein YabP/YqfC DB29_01956 f9e665702c73872a828442e2e9e7e2a0 104 ProDom PD067726 YABP B.SUBTILIS PRECURSOR UNCHARACTERIZED BH0074 SIGNAL CPE2477 PROTEIN 21 92 3.0E-35 T 14-10-2018 IPR012504 Sporulation protein YabP DB29_01956 f9e665702c73872a828442e2e9e7e2a0 104 Gene3D G3DSA:2.60.40.2000 29 86 7.7E-26 T 14-10-2018 IPR038705 YabP superfamily DB29_01956 f9e665702c73872a828442e2e9e7e2a0 104 TIGRFAM TIGR02892 spore_yabP: sporulation protein YabP 21 104 6.2E-33 T 14-10-2018 IPR012504 Sporulation protein YabP DB29_01092 9a771f03a98da4b3910f2b316193da80 139 Pfam PF04138 GtrA-like protein 18 127 1.3E-18 T 14-10-2018 IPR007267 GtrA-like protein GO:0000271|GO:0016021 DB29_01827 75f1b99a616177741c7daae22f9d48ea 61 SUPERFAMILY SSF140500 7 55 4.32E-11 T 14-10-2018 IPR037208 Aspartyl-phosphate phosphatase Spo0E-like superfamily GO:0043937 DB29_01827 75f1b99a616177741c7daae22f9d48ea 61 Gene3D G3DSA:1.20.58.990 6 60 3.8E-9 T 14-10-2018 IPR037208 Aspartyl-phosphate phosphatase Spo0E-like superfamily GO:0043937 DB29_01827 75f1b99a616177741c7daae22f9d48ea 61 Pfam PF09388 Spo0E like sporulation regulatory protein 10 50 2.4E-13 T 14-10-2018 IPR018540 Aspartyl-phosphate phosphatase Spo0E-like GO:0043937 DB29_03862 ef4160b5cfefe824ad17f20a3daa9707 275 SUPERFAMILY SSF88713 69 274 7.66E-45 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 DB29_03862 ef4160b5cfefe824ad17f20a3daa9707 275 Gene3D G3DSA:3.20.20.370 31 275 1.9E-50 T 14-10-2018 DB29_03862 ef4160b5cfefe824ad17f20a3daa9707 275 Pfam PF01522 Polysaccharide deacetylase 86 204 8.1E-25 T 14-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 DB29_04187 b380752978f2c0f198c5570c27ec4e1f 116 Gene3D G3DSA:2.70.180.10 1 115 3.1E-47 T 14-10-2018 IPR036492 Hypothetical protein YojF superfamily DB29_04187 b380752978f2c0f198c5570c27ec4e1f 116 SUPERFAMILY SSF89442 1 115 7.59E-55 T 14-10-2018 IPR036492 Hypothetical protein YojF superfamily DB29_04187 b380752978f2c0f198c5570c27ec4e1f 116 Pfam PF08830 Protein of unknown function (DUF1806) 3 114 3.9E-52 T 14-10-2018 IPR014934 Protein of unknown function DUF1806 DB29_02945 4ae5e9310830303b32a830eccdec2b17 364 SUPERFAMILY SSF55874 248 363 1.57E-11 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB29_02945 4ae5e9310830303b32a830eccdec2b17 364 Gene3D G3DSA:3.30.565.10 240 364 7.0E-24 T 14-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily DB29_02945 4ae5e9310830303b32a830eccdec2b17 364 Pfam PF07730 Histidine kinase 176 240 3.5E-18 T 14-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 DB29_02484 85408a2b8a6492f59a773c2fe28c0a90 257 Gene3D G3DSA:3.40.50.1820 1 246 3.1E-40 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DB29_02484 85408a2b8a6492f59a773c2fe28c0a90 257 Pfam PF12697 Alpha/beta hydrolase family 17 239 3.3E-15 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DB29_02484 85408a2b8a6492f59a773c2fe28c0a90 257 SUPERFAMILY SSF53474 2 245 3.02E-37 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DB29_00663 560d44f4483e726b46264123c524ebe8 156 PIRSF PIRSF000239 1 154 5.1E-30 T 14-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 DB29_00663 560d44f4483e726b46264123c524ebe8 156 Pfam PF00578 AhpC/TSA family 5 130 1.7E-41 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 DB29_00663 560d44f4483e726b46264123c524ebe8 156 SUPERFAMILY SSF52833 1 152 1.48E-55 T 14-10-2018 IPR036249 Thioredoxin-like superfamily DB29_00663 560d44f4483e726b46264123c524ebe8 156 Gene3D G3DSA:3.40.30.10 3 154 4.5E-55 T 14-10-2018 DB29_00176 a17aef5e424a0cc7c9b84d7da58198ed 256 Pfam PF02616 Segregation and condensation protein ScpA 23 246 3.6E-53 T 14-10-2018 IPR003768 Segregation and condensation protein A DB29_00176 a17aef5e424a0cc7c9b84d7da58198ed 256 Hamap MF_01805 Segregation and condensation protein A [scpA]. 6 249 24.844 T 14-10-2018 IPR003768 Segregation and condensation protein A DB29_03401 5e1649ab4740285dca8abc9d4c5751c8 137 Gene3D G3DSA:3.30.310.100 2 126 3.1E-32 T 14-10-2018 IPR036491 YugN-like superfamily DB29_03401 5e1649ab4740285dca8abc9d4c5751c8 137 SUPERFAMILY SSF160755 2 136 4.18E-35 T 14-10-2018 IPR036491 YugN-like superfamily DB29_03401 5e1649ab4740285dca8abc9d4c5751c8 137 Pfam PF08868 YugN-like family 4 136 2.3E-50 T 14-10-2018 IPR014967 Uncharacterised protein family, YugN-like DB29_03525 d8193ec5256c2c0527b2cc4d2f07ab02 111 Pfam PF14034 Sporulation protein YtrH 10 108 3.0E-36 T 14-10-2018 IPR025689 Sporulation protein YtrH DB29_01503 7a558f9bf114f5dc6eb43c9f6d00ac3d 204 Pfam PF03358 NADPH-dependent FMN reductase 13 150 1.4E-15 T 14-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 DB29_01503 7a558f9bf114f5dc6eb43c9f6d00ac3d 204 Gene3D G3DSA:3.40.50.360 1 203 3.5E-62 T 14-10-2018 IPR029039 Flavoprotein-like superfamily DB29_01503 7a558f9bf114f5dc6eb43c9f6d00ac3d 204 SUPERFAMILY SSF52218 5 196 1.03E-42 T 14-10-2018 IPR029039 Flavoprotein-like superfamily DB29_01503 7a558f9bf114f5dc6eb43c9f6d00ac3d 204 TIGRFAM TIGR01755 flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV 4 181 2.4E-42 T 14-10-2018 IPR010089 Flavoprotein WrbA-like GO:0003955|GO:0010181 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 DB29_02439 da30a9bb2663208cca5ca783bb506e2c 498 SUPERFAMILY SSF49899 336 488 7.91E-33 T 14-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily DB29_02439 da30a9bb2663208cca5ca783bb506e2c 498 ProSitePatterns PS00609 Glycosyl hydrolases family 32 active site. 35 48 - T 14-10-2018 IPR018053 Glycoside hydrolase, family 32, active site GO:0004553|GO:0005975 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26 DB29_02439 da30a9bb2663208cca5ca783bb506e2c 498 SMART SM00640 35 452 9.8E-145 T 14-10-2018 IPR001362 Glycoside hydrolase, family 32 GO:0004553|GO:0005975 DB29_02439 da30a9bb2663208cca5ca783bb506e2c 498 TIGRFAM TIGR01322 scrB_fam: sucrose-6-phosphate hydrolase 20 463 4.1E-174 T 14-10-2018 IPR006232 Sucrose-6-phosphate hydrolase GO:0004564|GO:0005737|GO:0005975 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26 DB29_02439 da30a9bb2663208cca5ca783bb506e2c 498 Pfam PF08244 Glycosyl hydrolases family 32 C terminal 339 482 1.2E-30 T 14-10-2018 IPR013189 Glycosyl hydrolase family 32, C-terminal DB29_02439 da30a9bb2663208cca5ca783bb506e2c 498 SUPERFAMILY SSF75005 27 337 5.34E-107 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily DB29_02439 da30a9bb2663208cca5ca783bb506e2c 498 Gene3D G3DSA:2.60.120.560 352 487 5.9E-32 T 14-10-2018 DB29_02439 da30a9bb2663208cca5ca783bb506e2c 498 Pfam PF00251 Glycosyl hydrolases family 32 N-terminal domain 35 336 1.1E-101 T 14-10-2018 IPR013148 Glycosyl hydrolase family 32, N-terminal DB29_02439 da30a9bb2663208cca5ca783bb506e2c 498 Gene3D G3DSA:2.115.10.20 1 351 1.2E-107 T 14-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily DB29_01498 8116ab6e661aedd78f8b5dc197ccfd2f 129 SUPERFAMILY SSF46579 7 123 8.63E-5 T 14-10-2018 DB29_01498 8116ab6e661aedd78f8b5dc197ccfd2f 129 ProDom PD338809 BH2346 YXIB BH4015 BH0976 PREFOLDIN 16 106 5.0E-40 T 14-10-2018 DB29_01498 8116ab6e661aedd78f8b5dc197ccfd2f 129 Pfam PF16888 Domain of unknown function (DUF5082) 6 124 1.1E-36 T 14-10-2018 IPR031681 Protein of unknown function DUF5082 DB29_01042 bfbe3369528a06eb6da17e8a1bb9df77 169 SUPERFAMILY SSF52540 3 162 8.3E-18 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_01042 bfbe3369528a06eb6da17e8a1bb9df77 169 Gene3D G3DSA:3.40.50.300 1 168 7.7E-21 T 14-10-2018 DB29_01042 bfbe3369528a06eb6da17e8a1bb9df77 169 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 91 126 7.2E-5 T 14-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 DB29_02519 f0e54c302d0326d4bf833143c091ed38 392 Pfam PF09314 Domain of unknown function (DUF1972) 2 185 1.4E-81 T 14-10-2018 IPR015393 Domain of unknown function DUF1972 DB29_02519 f0e54c302d0326d4bf833143c091ed38 392 Gene3D G3DSA:3.40.50.2000 193 352 1.2E-11 T 14-10-2018 DB29_02519 f0e54c302d0326d4bf833143c091ed38 392 Gene3D G3DSA:3.40.50.2000 3 192 2.2E-8 T 14-10-2018 DB29_02519 f0e54c302d0326d4bf833143c091ed38 392 Pfam PF00534 Glycosyl transferases group 1 204 346 2.0E-7 T 14-10-2018 IPR001296 Glycosyl transferase, family 1 DB29_02519 f0e54c302d0326d4bf833143c091ed38 392 SUPERFAMILY SSF53756 37 382 1.07E-30 T 14-10-2018 DB29_00786 524927844117e0f86a9811709cf0d32a 140 Pfam PF04134 Protein of unknown function, DUF393 14 123 3.1E-33 T 14-10-2018 IPR007263 Protein of unknown function DUF393 DB29_00292 4a754b63b2c87ac3e5141121b7146ac2 294 Pfam PF06207 Protein of unknown function (DUF1002) 39 256 5.1E-77 T 14-10-2018 IPR009343 Protein of unknown function DUF1002 DB29_02960 2b40400adf46c7c9b33bc05b3953c4d1 168 Pfam PF07454 Stage II sporulation protein P (SpoIIP) 66 142 7.6E-8 T 14-10-2018 IPR010897 Sporulation stage II, protein P DB29_01947 a9f2cfe457d7f9338ea1d22f16ec78ad 179 SUPERFAMILY SSF53271 2 178 6.56E-62 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like DB29_01947 a9f2cfe457d7f9338ea1d22f16ec78ad 179 TIGRFAM TIGR01203 HGPRTase: hypoxanthine phosphoribosyltransferase 8 172 3.3E-67 T 14-10-2018 IPR005904 Hypoxanthine phosphoribosyl transferase GO:0004422|GO:0005737|GO:0006166 KEGG: 00230+2.4.2.8|KEGG: 00983+2.4.2.8|MetaCyc: PWY-6599|MetaCyc: PWY-6609|MetaCyc: PWY-6610|MetaCyc: PWY-6620 DB29_01947 a9f2cfe457d7f9338ea1d22f16ec78ad 179 Pfam PF00156 Phosphoribosyl transferase domain 8 159 3.8E-27 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 DB29_01947 a9f2cfe457d7f9338ea1d22f16ec78ad 179 Gene3D G3DSA:3.40.50.2020 1 179 1.1E-66 T 14-10-2018 DB29_02154 6f5de77e3eff58225f35eab48c1610c2 439 Pfam PF02667 Short chain fatty acid transporter 4 439 1.1E-157 T 14-10-2018 IPR006160 Short chain fatty acid transporter AtoE DB29_02431 c5e1b90c6764315cd2208e94db8748a1 442 Pfam PF01547 Bacterial extracellular solute-binding protein 53 345 3.5E-39 T 14-10-2018 IPR006059 Bacterial extracellular solute-binding protein DB29_02431 c5e1b90c6764315cd2208e94db8748a1 442 SUPERFAMILY SSF53850 32 440 3.34E-65 T 14-10-2018 DB29_02431 c5e1b90c6764315cd2208e94db8748a1 442 Gene3D G3DSA:3.40.190.10 22 440 2.7E-76 T 14-10-2018 DB29_01443 32ca2acb9711bd36d0de96e800de0d7d 69 Gene3D G3DSA:3.30.429.10 2 67 3.4E-22 T 14-10-2018 IPR014347 Tautomerase/MIF superfamily DB29_01443 32ca2acb9711bd36d0de96e800de0d7d 69 SUPERFAMILY SSF55331 2 66 1.53E-14 T 14-10-2018 IPR014347 Tautomerase/MIF superfamily DB29_01443 32ca2acb9711bd36d0de96e800de0d7d 69 Pfam PF01361 Tautomerase enzyme 2 63 4.9E-18 T 14-10-2018 IPR004370 4-oxalocrotonate tautomerase GO:0006725|GO:0016853 DB29_01443 32ca2acb9711bd36d0de96e800de0d7d 69 TIGRFAM TIGR00013 taut: 4-oxalocrotonate tautomerase family enzyme 1 66 6.1E-24 T 14-10-2018 IPR018191 4-oxalocrotonate tautomerase, Pseudomonas-type GO:0006725|GO:0016853 DB29_00593 8803a6aed63c4bbebee3f492cb7f2f32 176 SUPERFAMILY SSF55729 2 169 2.88E-44 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase DB29_00593 8803a6aed63c4bbebee3f492cb7f2f32 176 Pfam PF13302 Acetyltransferase (GNAT) domain 6 145 7.8E-27 T 14-10-2018 IPR000182 GNAT domain DB29_00593 8803a6aed63c4bbebee3f492cb7f2f32 176 Gene3D G3DSA:3.40.630.30 1 176 4.0E-47 T 14-10-2018 DB29_02302 441ea435f935a6f3fa4357e745eff719 143 Pfam PF09148 Domain of unknown function (DUF1934) 8 137 1.3E-22 T 14-10-2018 IPR015231 Protein of unknown function DUF1934 DB29_02302 441ea435f935a6f3fa4357e745eff719 143 SUPERFAMILY SSF50814 1 141 5.69E-34 T 14-10-2018 IPR012674 Calycin DB29_02302 441ea435f935a6f3fa4357e745eff719 143 Gene3D G3DSA:2.40.128.20 1 142 9.6E-29 T 14-10-2018 IPR012674 Calycin DB29_04367 2b66e36a529de5464a86f641ed4da29c 197 Pfam PF01914 MarC family integral membrane protein 3 188 1.4E-22 T 14-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 DB29_00199 06d702e65b204ae2128aa3cff0b31be1 157 Pfam PF03862 SpoVAC/SpoVAEB sporulation membrane protein 34 147 6.3E-32 T 14-10-2018 IPR005562 SpoVA DB29_00199 06d702e65b204ae2128aa3cff0b31be1 157 TIGRFAM TIGR02838 spore_V_AC: stage V sporulation protein AC 13 152 1.3E-59 T 14-10-2018 IPR014203 Sporulation stage V, protein AC DB29_01833 65a3097f1f5b4c606528737537eb55a0 59 SMART SM00530 1 55 3.8E-14 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DB29_01833 65a3097f1f5b4c606528737537eb55a0 59 Gene3D G3DSA:1.10.260.40 1 58 4.8E-24 T 14-10-2018 DB29_01833 65a3097f1f5b4c606528737537eb55a0 59 SUPERFAMILY SSF47413 1 57 6.97E-18 T 14-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 DB29_01833 65a3097f1f5b4c606528737537eb55a0 59 Pfam PF01381 Helix-turn-helix 1 55 2.1E-17 T 14-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 DB29_01581 58891a220846140109f43ca4e71c2283 115 ProSitePatterns PS00893 Nudix box signature. 33 54 - T 14-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 DB29_01581 58891a220846140109f43ca4e71c2283 115 SUPERFAMILY SSF55811 6 90 6.09E-21 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 DB29_01581 58891a220846140109f43ca4e71c2283 115 PRINTS PR00502 NUDIX hydrolase family signature 28 42 1.0E-6 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 DB29_01581 58891a220846140109f43ca4e71c2283 115 PRINTS PR00502 NUDIX hydrolase family signature 42 57 1.0E-6 T 14-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 DB29_01581 58891a220846140109f43ca4e71c2283 115 Pfam PF00293 NUDIX domain 3 68 1.3E-14 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 DB29_01581 58891a220846140109f43ca4e71c2283 115 Gene3D G3DSA:3.90.79.10 4 101 1.6E-20 T 14-10-2018 DB29_02314 95cb99a506b7676be6f87119a5cd5917 172 Gene3D G3DSA:3.40.50.10490 1 172 8.9E-54 T 14-10-2018 DB29_02314 95cb99a506b7676be6f87119a5cd5917 172 SUPERFAMILY SSF53697 3 133 1.3E-5 T 14-10-2018 DB29_02314 95cb99a506b7676be6f87119a5cd5917 172 Pfam PF10740 Domain of unknown function (DUF2529) 1 168 4.6E-59 T 14-10-2018 IPR019676 Domain of unknown function (DUF2529) DB29_03256 50161138d44f3cf17af6d8fc1964910c 417 PRINTS PR00463 E-class P450 group I signature 364 387 1.2E-5 T 14-10-2018 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 DB29_03256 50161138d44f3cf17af6d8fc1964910c 417 PRINTS PR00463 E-class P450 group I signature 318 342 1.2E-5 T 14-10-2018 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 DB29_03256 50161138d44f3cf17af6d8fc1964910c 417 PRINTS PR00463 E-class P450 group I signature 278 296 1.2E-5 T 14-10-2018 IPR002401 Cytochrome P450, E-class, group I GO:0005506|GO:0016705|GO:0020037|GO:0055114 DB29_03256 50161138d44f3cf17af6d8fc1964910c 417 Gene3D G3DSA:1.10.630.10 2 417 1.1E-168 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 DB29_03256 50161138d44f3cf17af6d8fc1964910c 417 Pfam PF00067 Cytochrome P450 277 395 1.9E-18 T 14-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 DB29_03256 50161138d44f3cf17af6d8fc1964910c 417 SUPERFAMILY SSF48264 13 409 1.57E-63 T 14-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 DB29_03337 422b6eb19be8cc7ccd132f2862397a67 62 Pfam PF01872 RibD C-terminal domain 19 46 1.5E-5 T 14-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 DB29_03337 422b6eb19be8cc7ccd132f2862397a67 62 SUPERFAMILY SSF53597 18 52 1.15E-6 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 DB29_03337 422b6eb19be8cc7ccd132f2862397a67 62 Gene3D G3DSA:3.40.430.10 7 60 4.8E-7 T 14-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 DB29_04337 49d36e68f124c34724fb316bacc7650e 51 Pfam PF09388 Spo0E like sporulation regulatory protein 5 39 3.9E-12 T 14-10-2018 IPR018540 Aspartyl-phosphate phosphatase Spo0E-like GO:0043937 DB29_04337 49d36e68f124c34724fb316bacc7650e 51 Gene3D G3DSA:1.20.58.990 2 51 3.4E-14 T 14-10-2018 IPR037208 Aspartyl-phosphate phosphatase Spo0E-like superfamily GO:0043937 DB29_04337 49d36e68f124c34724fb316bacc7650e 51 SUPERFAMILY SSF140500 2 44 5.23E-13 T 14-10-2018 IPR037208 Aspartyl-phosphate phosphatase Spo0E-like superfamily GO:0043937 DB29_02953 6d48d91c12d9285a2d383cf8ad6082af 321 Gene3D G3DSA:3.40.50.1820 56 317 3.1E-37 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DB29_02953 6d48d91c12d9285a2d383cf8ad6082af 321 Pfam PF00561 alpha/beta hydrolase fold 87 207 1.4E-13 T 14-10-2018 IPR000073 Alpha/beta hydrolase fold-1 DB29_02953 6d48d91c12d9285a2d383cf8ad6082af 321 SUPERFAMILY SSF53474 12 309 2.45E-44 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DB29_03183 03caf1beeea41da3220a183758bf525e 191 Gene3D G3DSA:3.40.50.850 11 191 4.7E-52 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 DB29_03183 03caf1beeea41da3220a183758bf525e 191 SUPERFAMILY SSF52499 12 190 4.71E-50 T 14-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 DB29_03183 03caf1beeea41da3220a183758bf525e 191 Pfam PF00857 Isochorismatase family 13 189 2.7E-34 T 14-10-2018 IPR000868 Isochorismatase-like GO:0003824 DB29_01872 8d507697162a036a64b7de2ad82fe28c 264 Pfam PF02361 Cobalt transport protein 15 238 1.5E-46 T 14-10-2018 IPR003339 ABC/ECF transporter, transmembrane component DB29_00051 a74ccdfd8af4139b6389dea72ae6dd54 360 PIRSF PIRSF006468 1 358 8.8E-131 T 14-10-2018 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767|Reactome: R-HSA-70895 DB29_00051 a74ccdfd8af4139b6389dea72ae6dd54 360 Gene3D G3DSA:3.30.470.10 25 352 4.9E-136 T 14-10-2018 DB29_00051 a74ccdfd8af4139b6389dea72ae6dd54 360 SUPERFAMILY SSF56752 11 353 1.02E-116 T 14-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 DB29_00051 a74ccdfd8af4139b6389dea72ae6dd54 360 TIGRFAM TIGR01123 ilvE_II: branched-chain amino acid aminotransferase 44 356 1.2E-123 T 14-10-2018 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767|Reactome: R-HSA-70895 DB29_00051 a74ccdfd8af4139b6389dea72ae6dd54 360 Gene3D G3DSA:3.20.10.10 171 339 4.9E-136 T 14-10-2018 DB29_00051 a74ccdfd8af4139b6389dea72ae6dd54 360 ProSitePatterns PS00770 Aminotransferases class-IV signature. 233 262 - T 14-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 DB29_00051 a74ccdfd8af4139b6389dea72ae6dd54 360 Pfam PF01063 Amino-transferase class IV 70 312 8.6E-35 T 14-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 DB29_02118 f3a0299639e481c899a8dd51b2b87b84 323 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 236 322 1.7E-28 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DB29_02118 f3a0299639e481c899a8dd51b2b87b84 323 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 237 302 3.3E-17 T 14-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 DB29_02118 f3a0299639e481c899a8dd51b2b87b84 323 Gene3D G3DSA:3.40.50.300 5 323 1.2E-96 T 14-10-2018 DB29_02118 f3a0299639e481c899a8dd51b2b87b84 323 SUPERFAMILY SSF52540 8 257 6.63E-68 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_02118 f3a0299639e481c899a8dd51b2b87b84 323 ProSitePatterns PS00211 ABC transporters family signature. 158 172 - T 14-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 DB29_02118 f3a0299639e481c899a8dd51b2b87b84 323 SMART SM00382 43 234 6.7E-9 T 14-10-2018 IPR003593 AAA+ ATPase domain DB29_02118 f3a0299639e481c899a8dd51b2b87b84 323 Pfam PF00005 ABC transporter 35 185 4.0E-29 T 14-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 DB29_01441 1115e59795fd7c4c918462f0c44d10b5 291 TIGRFAM TIGR00937 2A51: chromate efflux transporter 7 285 2.6E-64 T 14-10-2018 IPR014047 Chromate transporter, long chain DB29_01441 1115e59795fd7c4c918462f0c44d10b5 291 Pfam PF02417 Chromate transporter 125 287 7.3E-38 T 14-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 DB29_03873 e3b21ed9ff7d13f6dc604e6f40cff456 66 Pfam PF09963 Uncharacterized protein conserved in bacteria (DUF2197) 2 54 1.4E-28 T 14-10-2018 IPR019241 Protein of unknown function DUF2197 DB29_01883 c5fedab9bf86b025d315a3c523c7ec5e 146 ProSitePatterns PS00475 Ribosomal protein L15 signature. 110 140 - T 14-10-2018 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 DB29_01883 c5fedab9bf86b025d315a3c523c7ec5e 146 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 146 22.671 T 14-10-2018 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 DB29_01883 c5fedab9bf86b025d315a3c523c7ec5e 146 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 143 9.1E-55 T 14-10-2018 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 DB29_01883 c5fedab9bf86b025d315a3c523c7ec5e 146 Gene3D G3DSA:3.100.10.10 66 146 4.2E-26 T 14-10-2018 DB29_01883 c5fedab9bf86b025d315a3c523c7ec5e 146 SUPERFAMILY SSF52080 4 143 1.31E-49 T 14-10-2018 IPR036227 Ribosomal L18e/L15P superfamily DB29_01883 c5fedab9bf86b025d315a3c523c7ec5e 146 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 144 1.8E-38 T 14-10-2018 IPR021131 Ribosomal protein L18e/L15P DB29_00595 e365658effc586490eb1d586366d514f 205 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 7 177 5.3E-31 T 14-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 DB29_00595 e365658effc586490eb1d586366d514f 205 SUPERFAMILY SSF51695 3 200 4.71E-55 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 DB29_00595 e365658effc586490eb1d586366d514f 205 Gene3D G3DSA:3.20.20.190 1 203 1.2E-58 T 14-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 DB29_01039 a786c5a6f408642d55b058f6fb886c5e 424 Pfam PF03611 PTS system sugar-specific permease component 11 405 1.5E-125 T 14-10-2018 IPR004703 Phosphotransferase system, sugar-specific permease component GO:0009401|GO:0016021 DB29_01854 ea452386271af5857f6719f51175e4b9 320 ProDom PD027642 TRANSMEMBRANE MEMBRANE YVAX YITO 77 144 1.0E-26 T 14-10-2018 DB29_01854 ea452386271af5857f6719f51175e4b9 320 TIGRFAM TIGR04033 export_SdpB: antimicrobial peptide system protein, SdpB family 12 291 2.4E-76 T 14-10-2018 IPR023894 Sporulation delaying protein SdpB DB29_01854 ea452386271af5857f6719f51175e4b9 320 SMART SM00752 15 292 8.2E-48 T 14-10-2018 IPR011020 HTTM Reactome: R-HSA-159740 DB29_01854 ea452386271af5857f6719f51175e4b9 320 ProDom PD031536 MEMBRANE TRANSMEMBRANE YVAX YITN 195 307 1.0E-60 T 14-10-2018 DB29_01854 ea452386271af5857f6719f51175e4b9 320 Pfam PF05090 Vitamin K-dependent gamma-carboxylase 154 310 3.2E-7 T 14-10-2018 IPR007782 Vitamin K-dependent gamma-carboxylase GO:0008488|GO:0017187 KEGG: 00130+4.1.1.90|Reactome: R-HSA-159740 DB29_00273 161f8c94af9b1d9d9105fb1d86536cbb 131 Pfam PF07997 Protein of unknown function (DUF1694) 4 115 3.6E-33 T 14-10-2018 IPR012543 Protein of unknown function DUF1694 DB29_00273 161f8c94af9b1d9d9105fb1d86536cbb 131 SUPERFAMILY SSF160515 4 125 4.97E-32 T 14-10-2018 DB29_00273 161f8c94af9b1d9d9105fb1d86536cbb 131 PIRSF PIRSF034303 1 128 5.6E-30 T 14-10-2018 IPR012543 Protein of unknown function DUF1694 DB29_00273 161f8c94af9b1d9d9105fb1d86536cbb 131 Gene3D G3DSA:3.30.1330.30 2 130 3.4E-36 T 14-10-2018 IPR029064 50S ribosomal protein L30e-like DB29_02456 3e88f8408f2d54a2e9bdfd749b1ea21c 289 Gene3D G3DSA:1.10.3720.10 76 274 6.2E-30 T 14-10-2018 IPR035906 MetI-like superfamily DB29_02456 3e88f8408f2d54a2e9bdfd749b1ea21c 289 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 99 267 2.2E-27 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DB29_02456 3e88f8408f2d54a2e9bdfd749b1ea21c 289 SUPERFAMILY SSF161098 79 260 1.28E-33 T 14-10-2018 IPR035906 MetI-like superfamily DB29_00621 7626a2d72e5401bc001d884170e3fe64 238 Pfam PF07071 KDGP aldolase 1 220 2.0E-91 T 14-10-2018 IPR010763 2-dehydro-3-deoxy-phosphogluconate aldolase KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 DB29_00621 7626a2d72e5401bc001d884170e3fe64 238 TIGRFAM TIGR03581 EF_0839: conserved hypothetical protein EF_0839/AHA_3917 1 238 1.8E-104 T 14-10-2018 IPR010763 2-dehydro-3-deoxy-phosphogluconate aldolase KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 DB29_00621 7626a2d72e5401bc001d884170e3fe64 238 Gene3D G3DSA:3.20.20.70 1 238 2.6E-89 T 14-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 DB29_03372 64b2c106ab8d7702bec54c1d165f9f8b 221 Gene3D G3DSA:1.10.3720.10 3 218 1.0E-54 T 14-10-2018 IPR035906 MetI-like superfamily DB29_03372 64b2c106ab8d7702bec54c1d165f9f8b 221 SUPERFAMILY SSF161098 14 216 2.09E-45 T 14-10-2018 IPR035906 MetI-like superfamily DB29_03372 64b2c106ab8d7702bec54c1d165f9f8b 221 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 35 216 2.1E-20 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DB29_03372 64b2c106ab8d7702bec54c1d165f9f8b 221 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 13 110 3.4E-28 T 14-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 DB29_00869 e7ef3636c8c88e7ebaf9186820979fc1 171 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 24 152 2.6E-31 T 14-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ DB29_01173 313abe74b95342ec73c0899a80c7b595 153 Gene3D G3DSA:1.20.58.1290 63 153 2.3E-24 T 14-10-2018 DB29_01173 313abe74b95342ec73c0899a80c7b595 153 Pfam PF02559 CarD-like/TRCF domain 2 110 2.0E-17 T 14-10-2018 IPR003711 CarD-like/TRCF domain DB29_01173 313abe74b95342ec73c0899a80c7b595 153 SMART SM01058 1 111 1.5E-29 T 14-10-2018 IPR003711 CarD-like/TRCF domain DB29_01173 313abe74b95342ec73c0899a80c7b595 153 SUPERFAMILY SSF141259 1 56 1.22E-12 T 14-10-2018 IPR036101 CarD-like/TRCF domain superfamily DB29_01173 313abe74b95342ec73c0899a80c7b595 153 Gene3D G3DSA:2.30.30.840 1 62 1.1E-24 T 14-10-2018 DB29_03019 983533f3ba6a04bbfc22f1de0365d17f 74 Pfam PF13377 Periplasmic binding protein-like domain 6 55 4.8E-11 T 14-10-2018 DB29_03019 983533f3ba6a04bbfc22f1de0365d17f 74 SUPERFAMILY SSF53822 1 55 2.57E-11 T 14-10-2018 IPR028082 Periplasmic binding protein-like I DB29_03019 983533f3ba6a04bbfc22f1de0365d17f 74 Gene3D G3DSA:3.40.50.2300 1 55 1.4E-12 T 14-10-2018 DB29_03306 dd979685cc773ae37dafb064b192cf51 585 Pfam PF12793 Sugar transport-related sRNA regulator N-term 5 100 7.9E-20 T 14-10-2018 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain DB29_03306 dd979685cc773ae37dafb064b192cf51 585 Gene3D G3DSA:3.10.105.10 358 551 1.3E-9 T 14-10-2018 DB29_03306 dd979685cc773ae37dafb064b192cf51 585 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 170 495 4.1E-35 T 14-10-2018 IPR000914 Solute-binding protein family 5 domain DB29_03306 dd979685cc773ae37dafb064b192cf51 585 SUPERFAMILY SSF53850 124 581 1.81E-72 T 14-10-2018 DB29_03306 dd979685cc773ae37dafb064b192cf51 585 PIRSF PIRSF002741 96 583 6.0E-38 T 14-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 DB29_03306 dd979685cc773ae37dafb064b192cf51 585 Gene3D G3DSA:3.40.190.10 116 357 3.1E-40 T 14-10-2018 DB29_00047 27849ec70c2820a4f38549434e9ac5cb 265 Pfam PF02361 Cobalt transport protein 7 221 2.6E-32 T 14-10-2018 IPR003339 ABC/ECF transporter, transmembrane component DB29_00938 974d9683d0b921ca2394f17a024ec75f 352 Pfam PF12698 ABC-2 family transporter protein 19 342 3.7E-30 T 14-10-2018 DB29_02581 e22aab9c559adf802b25d5de5100ad53 288 Pfam PF13349 Putative adhesin 40 288 2.2E-48 T 14-10-2018 IPR025164 Putative adhesin DB29_01470 1e688ff10dd5060cf177874515f10bbc 236 Pfam PF04854 Protein of unknown function, DUF624 22 115 1.7E-22 T 14-10-2018 IPR006938 Protein of unknown function DUF624 DB29_02649 cf9d8fc6a82c797e0e91d64f9478431e 314 SUPERFAMILY SSF53613 1 289 4.21E-45 T 14-10-2018 IPR029056 Ribokinase-like DB29_02649 cf9d8fc6a82c797e0e91d64f9478431e 314 Pfam PF00294 pfkB family carbohydrate kinase 14 286 2.6E-29 T 14-10-2018 IPR011611 Carbohydrate kinase PfkB DB29_02649 cf9d8fc6a82c797e0e91d64f9478431e 314 PIRSF PIRSF000535 1 310 2.8E-52 T 14-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 DB29_02649 cf9d8fc6a82c797e0e91d64f9478431e 314 Gene3D G3DSA:3.40.1190.20 1 313 4.0E-72 T 14-10-2018 IPR029056 Ribokinase-like DB29_01842 8a491d672d5a7c2510004e9543f98726 227 Pfam PF11139 Sap, sulfolipid-1-addressing protein 9 208 1.3E-24 T 14-10-2018 IPR021315 Glycolipid exporter Gap/Sap DB29_02107 69b89b400d820bbf4fd837e824db3b32 137 Gene3D G3DSA:3.40.50.510 2 137 6.9E-34 T 14-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 DB29_02107 69b89b400d820bbf4fd837e824db3b32 137 Pfam PF03610 PTS system fructose IIA component 7 115 3.2E-17 T 14-10-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 DB29_02107 69b89b400d820bbf4fd837e824db3b32 137 SUPERFAMILY SSF53062 3 132 7.46E-30 T 14-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 DB29_01139 368bd23014fa3cd43c880e94c7e97c3e 70 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 2 65 4.0E-10 T 14-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 DB29_01123 b0e5e0b9607575a3a869223c1ac70b18 276 Gene3D G3DSA:3.40.190.10 51 267 8.3E-76 T 14-10-2018 DB29_01123 b0e5e0b9607575a3a869223c1ac70b18 276 Pfam PF03180 NLPA lipoprotein 37 273 2.8E-65 T 14-10-2018 IPR004872 Lipoprotein NlpA family DB29_01123 b0e5e0b9607575a3a869223c1ac70b18 276 Gene3D G3DSA:3.40.190.10 116 224 8.3E-76 T 14-10-2018 DB29_01123 b0e5e0b9607575a3a869223c1ac70b18 276 SUPERFAMILY SSF53850 36 274 1.11E-62 T 14-10-2018 DB29_01801 07a98b7057828105a72b54f0784ff27a 301 PRINTS PR00118 Beta-lactamase class A signature 151 175 1.8E-60 T 14-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 DB29_01801 07a98b7057828105a72b54f0784ff27a 301 PRINTS PR00118 Beta-lactamase class A signature 44 68 1.8E-60 T 14-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 DB29_01801 07a98b7057828105a72b54f0784ff27a 301 PRINTS PR00118 Beta-lactamase class A signature 213 228 1.8E-60 T 14-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 DB29_01801 07a98b7057828105a72b54f0784ff27a 301 PRINTS PR00118 Beta-lactamase class A signature 177 202 1.8E-60 T 14-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 DB29_01801 07a98b7057828105a72b54f0784ff27a 301 PRINTS PR00118 Beta-lactamase class A signature 75 92 1.8E-60 T 14-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 DB29_01801 07a98b7057828105a72b54f0784ff27a 301 PRINTS PR00118 Beta-lactamase class A signature 115 140 1.8E-60 T 14-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 DB29_01801 07a98b7057828105a72b54f0784ff27a 301 PRINTS PR00118 Beta-lactamase class A signature 230 245 1.8E-60 T 14-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 DB29_01801 07a98b7057828105a72b54f0784ff27a 301 Pfam PF13354 Beta-lactamase enzyme family 64 270 7.7E-34 T 14-10-2018 DB29_01801 07a98b7057828105a72b54f0784ff27a 301 Gene3D G3DSA:3.40.710.10 33 297 4.3E-73 T 14-10-2018 DB29_01801 07a98b7057828105a72b54f0784ff27a 301 SUPERFAMILY SSF56601 43 297 2.9E-72 T 14-10-2018 IPR012338 Beta-lactamase/transpeptidase-like DB29_02032 d32c7fc56ab9fced6801e6957d9ad527 148 Pfam PF06713 Bacterial PH domain 61 136 3.1E-22 T 14-10-2018 IPR009589 Sublancin immunity protein SunI GO:0030153 DB29_03387 d03f524cd8cd20112d1cca0a93109202 442 Pfam PF03553 Na+/H+ antiporter family 151 436 1.5E-60 T 14-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 DB29_03387 d03f524cd8cd20112d1cca0a93109202 442 Pfam PF13726 Na+-H+ antiporter family 2 88 1.7E-33 T 14-10-2018 IPR032813 Putative Na+/H+ antiporter, N-terminal DB29_02600 c2ed338deff231aeffb5d0813b341198 171 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 19 148 1.7E-30 T 14-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ DB29_00649 94898bd60f16b9fae50ffae594a2ff47 359 Gene3D G3DSA:3.40.50.1820 154 359 4.0E-21 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DB29_00649 94898bd60f16b9fae50ffae594a2ff47 359 SUPERFAMILY SSF53474 151 358 1.56E-26 T 14-10-2018 IPR029058 Alpha/Beta hydrolase fold DB29_00649 94898bd60f16b9fae50ffae594a2ff47 359 Pfam PF12146 Serine aminopeptidase, S33 175 276 1.1E-6 T 14-10-2018 IPR022742 Serine aminopeptidase, S33 DB29_03354 9dfe51129041745860ff3c2c0f1fda2e 94 PIRSF PIRSF012565 1 94 1.4E-52 T 14-10-2018 IPR009370 Protein of unknown function DUF1027 DB29_03354 9dfe51129041745860ff3c2c0f1fda2e 94 Gene3D G3DSA:3.50.4.20 1 94 2.6E-44 T 14-10-2018 IPR038141 YutD-like superfamily DB29_03354 9dfe51129041745860ff3c2c0f1fda2e 94 Pfam PF06265 Protein of unknown function (DUF1027) 4 87 1.3E-39 T 14-10-2018 IPR009370 Protein of unknown function DUF1027 DB29_02624 531a970dc2efde6b7b9ffef51c4b28b4 519 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 16 507 4.9E-121 T 14-10-2018 IPR000060 BCCT transporter family GO:0016020|GO:0022857|GO:0071705 DB29_00772 83e0790c763fa312332900e8fca69b09 311 SUPERFAMILY SSF160964 26 72 9.42E-6 T 14-10-2018 DB29_00772 83e0790c763fa312332900e8fca69b09 311 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 102 298 7.1E-13 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DB29_00772 83e0790c763fa312332900e8fca69b09 311 SUPERFAMILY SSF161098 69 295 8.24E-56 T 14-10-2018 IPR035906 MetI-like superfamily DB29_00772 83e0790c763fa312332900e8fca69b09 311 Gene3D G3DSA:1.10.3720.10 65 303 4.6E-65 T 14-10-2018 IPR035906 MetI-like superfamily DB29_01460 89beea069c19350496812ce596256a89 316 Pfam PF06675 Protein of unknown function (DUF1177) 40 310 1.7E-138 T 14-10-2018 IPR009561 Protein of unknown function DUF1177 DB29_02956 eaa96dc3d1c806f601456dfa7ef33498 311 SMART SM00028 206 239 59.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DB29_02956 eaa96dc3d1c806f601456dfa7ef33498 311 SMART SM00028 168 201 30.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DB29_02956 eaa96dc3d1c806f601456dfa7ef33498 311 SMART SM00028 127 160 4.2 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DB29_02956 eaa96dc3d1c806f601456dfa7ef33498 311 SMART SM00028 87 120 150.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DB29_02956 eaa96dc3d1c806f601456dfa7ef33498 311 Gene3D G3DSA:1.25.40.10 1 289 6.3E-59 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DB29_02956 eaa96dc3d1c806f601456dfa7ef33498 311 SUPERFAMILY SSF48452 87 243 1.52E-13 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DB29_02499 d127311a601a6be658dd267321c0e693 485 Pfam PF01235 Sodium:alanine symporter family 49 460 3.1E-155 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 DB29_02499 d127311a601a6be658dd267321c0e693 485 TIGRFAM TIGR00835 agcS: amino acid carrier protein 13 448 8.8E-141 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 DB29_02499 d127311a601a6be658dd267321c0e693 485 PRINTS PR00175 Sodium/alanine symporter signature 86 108 3.8E-58 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 DB29_02499 d127311a601a6be658dd267321c0e693 485 PRINTS PR00175 Sodium/alanine symporter signature 354 376 3.8E-58 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 DB29_02499 d127311a601a6be658dd267321c0e693 485 PRINTS PR00175 Sodium/alanine symporter signature 176 194 3.8E-58 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 DB29_02499 d127311a601a6be658dd267321c0e693 485 PRINTS PR00175 Sodium/alanine symporter signature 204 223 3.8E-58 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 DB29_02499 d127311a601a6be658dd267321c0e693 485 PRINTS PR00175 Sodium/alanine symporter signature 295 313 3.8E-58 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 DB29_02499 d127311a601a6be658dd267321c0e693 485 PRINTS PR00175 Sodium/alanine symporter signature 417 437 3.8E-58 T 14-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 DB29_02753 e3f200ddfb7009b6820c13e3aa263ede 116 Pfam PF14079 Domain of unknown function (DUF4260) 5 115 4.3E-42 T 14-10-2018 IPR025356 Protein of unknown function DUF4260 DB29_01825 1a18d04a2da9e8ec232a630fd9b0ed7d 221 Pfam PF13490 Putative zinc-finger 7 38 1.6E-7 T 14-10-2018 IPR027383 Putative zinc-finger DB29_01825 1a18d04a2da9e8ec232a630fd9b0ed7d 221 Gene3D G3DSA:1.10.10.1320 2 95 1.2E-8 T 14-10-2018 DB29_01074 741c313252d4bc9ea733e1fa394d34f1 593 SUPERFAMILY SSF48371 168 423 1.73E-7 T 14-10-2018 IPR016024 Armadillo-type fold DB29_02384 4335ced2851ee459a87ec453037a00cd 162 Pfam PF12688 Tetratrico peptide repeat 40 156 3.5E-13 T 14-10-2018 DB29_02384 4335ced2851ee459a87ec453037a00cd 162 SUPERFAMILY SSF48452 6 152 3.28E-18 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DB29_02384 4335ced2851ee459a87ec453037a00cd 162 Gene3D G3DSA:1.25.40.10 46 154 5.2E-23 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DB29_01774 f35e077da1aade00362c103a0cb583dd 364 Pfam PF01594 AI-2E family transporter 18 349 7.0E-77 T 14-10-2018 IPR002549 Transmembrane protein TqsA-like DB29_02718 953c4cfeb56c6fb1d069e166f231fbb5 314 Pfam PF02653 Branched-chain amino acid transport system / permease component 39 306 4.3E-52 T 14-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 DB29_03859 4d38578c23c34bf749bf9eb62d787a68 128 SUPERFAMILY SSF52833 14 126 4.67E-9 T 14-10-2018 IPR036249 Thioredoxin-like superfamily DB29_03121 1e7ee426c25dad90b3d8d131b0562ef8 87 Pfam PF17279 Family of unknown function (DUF5344) 1 87 1.3E-15 T 14-10-2018 DB29_03192 fa137c452f4a4524abd9d1bdfb2d4c01 250 Pfam PF01066 CDP-alcohol phosphatidyltransferase 54 118 1.1E-7 T 14-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 DB29_03192 fa137c452f4a4524abd9d1bdfb2d4c01 250 Gene3D G3DSA:1.20.120.1760 26 228 4.8E-21 T 14-10-2018 DB29_00020 1ba5af4d7bcc55cbe15e6733f24394ed 111 Gene3D G3DSA:3.30.300.130 3 111 2.9E-36 T 14-10-2018 IPR034904 Fe-S cluster assembly domain superfamily DB29_00020 1ba5af4d7bcc55cbe15e6733f24394ed 111 SUPERFAMILY SSF117916 9 108 7.19E-31 T 14-10-2018 IPR034904 Fe-S cluster assembly domain superfamily DB29_00020 1ba5af4d7bcc55cbe15e6733f24394ed 111 Pfam PF01883 Iron-sulfur cluster assembly protein 11 77 1.1E-19 T 14-10-2018 IPR002744 MIP18 family-like DB29_01346 59f12dff23f4226a55c1c55ab3ac2f89 386 Gene3D G3DSA:2.40.37.30 8 379 3.8E-136 T 14-10-2018 DB29_01346 59f12dff23f4226a55c1c55ab3ac2f89 386 Pfam PF01168 Alanine racemase, N-terminal domain 33 265 9.4E-21 T 14-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 DB29_01346 59f12dff23f4226a55c1c55ab3ac2f89 386 SUPERFAMILY SSF51419 34 268 4.97E-22 T 14-10-2018 IPR029066 PLP-binding barrel DB29_01346 59f12dff23f4226a55c1c55ab3ac2f89 386 Gene3D G3DSA:3.20.20.10 99 252 3.8E-136 T 14-10-2018 IPR029066 PLP-binding barrel DB29_00378 dc16de5549d0efa42d2f270b49ef2d63 91 Pfam PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) 32 83 3.1E-16 T 14-10-2018 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 DB29_00378 dc16de5549d0efa42d2f270b49ef2d63 91 PIRSF PIRSF028784 1 91 2.0E-27 T 14-10-2018 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 DB29_00802 978773e725de6d944de63ddc92153c38 575 Pfam PF04740 LXG domain of WXG superfamily 3 199 2.4E-51 T 14-10-2018 IPR006829 LXG domain DB29_02292 a728dffcf865666c09b06834b6442247 227 Gene3D G3DSA:2.40.260.10 79 217 2.2E-42 T 14-10-2018 IPR023365 Sortase domain superfamily DB29_02292 a728dffcf865666c09b06834b6442247 227 Pfam PF04203 Sortase family 93 213 7.8E-29 T 14-10-2018 IPR005754 Sortase family DB29_02292 a728dffcf865666c09b06834b6442247 227 SUPERFAMILY SSF63817 80 215 9.94E-38 T 14-10-2018 IPR023365 Sortase domain superfamily DB29_02292 a728dffcf865666c09b06834b6442247 227 TIGRFAM TIGR01076 sortase_fam: sortase 91 208 5.3E-30 T 14-10-2018 IPR005754 Sortase family DB29_03889 d8bd840d4969da865d0321c6ff4ba5b2 89 Pfam PF14003 YlbE-like protein 13 73 1.8E-27 T 14-10-2018 IPR025613 YlbE-like protein DB29_01658 1ba3f0d8c5b0b3aa71c8be786246442f 310 SUPERFAMILY SSF161098 67 294 1.7E-58 T 14-10-2018 IPR035906 MetI-like superfamily DB29_01658 1ba3f0d8c5b0b3aa71c8be786246442f 310 Gene3D G3DSA:1.10.3720.10 63 302 1.7E-69 T 14-10-2018 IPR035906 MetI-like superfamily DB29_01658 1ba3f0d8c5b0b3aa71c8be786246442f 310 SUPERFAMILY SSF160964 22 57 8.76E-5 T 14-10-2018 DB29_01658 1ba3f0d8c5b0b3aa71c8be786246442f 310 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 98 295 1.0E-13 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DB29_01472 2b2299c1d0cdfff70193a62ced2e39db 289 SUPERFAMILY SSF161098 8 289 2.75E-55 T 14-10-2018 IPR035906 MetI-like superfamily DB29_01472 2b2299c1d0cdfff70193a62ced2e39db 289 Gene3D G3DSA:1.10.3720.10 2 281 6.5E-71 T 14-10-2018 IPR035906 MetI-like superfamily DB29_01472 2b2299c1d0cdfff70193a62ced2e39db 289 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 93 282 3.8E-13 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DB29_00614 b139dfd202cf0c5bfbd50ea0656c82ef 119 Gene3D G3DSA:1.10.10.10 1 93 2.9E-16 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_00614 b139dfd202cf0c5bfbd50ea0656c82ef 119 SUPERFAMILY SSF46785 1 93 9.4E-15 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_02798 2f867dc2e5af9dcae33f493046ae1c37 307 Pfam PF03547 Membrane transport protein 160 297 8.1E-13 T 14-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 DB29_00872 8b899bce975ff595863e8c71654e6f2f 292 Gene3D G3DSA:3.90.850.10 77 292 6.3E-89 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 DB29_00872 8b899bce975ff595863e8c71654e6f2f 292 SUPERFAMILY SSF56529 71 291 2.22E-81 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 DB29_00872 8b899bce975ff595863e8c71654e6f2f 292 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 82 288 2.5E-74 T 14-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 DB29_03918 c8a133fc4ceb82234d4f3fe7c05349ec 254 Pfam PF08478 POTRA domain, FtsQ-type 52 119 2.2E-16 T 14-10-2018 IPR013685 POTRA domain, FtsQ-type DB29_03918 c8a133fc4ceb82234d4f3fe7c05349ec 254 Pfam PF03799 Cell division protein FtsQ 125 233 2.6E-6 T 14-10-2018 IPR005548 Cell division protein FtsQ/DivIB DB29_03918 c8a133fc4ceb82234d4f3fe7c05349ec 254 Hamap MF_00912 Cell division protein DivIB [divIB]. 10 251 25.052 T 14-10-2018 IPR026580 Cell division protein DivIB DB29_03918 c8a133fc4ceb82234d4f3fe7c05349ec 254 Gene3D G3DSA:3.40.50.10960 116 235 1.4E-35 T 14-10-2018 DB29_00971 16c2a6f97b277ea88b79b3e66a0209b3 503 Pfam PF01970 Tripartite tricarboxylate transporter TctA family 20 438 7.0E-152 T 14-10-2018 IPR002823 Protein of unknown function DUF112, transmembrane DB29_00812 da20a5bf739439042a7bed50da8db94e 416 PRINTS PR00447 Natural resistance-associated macrophage protein signature 355 374 2.2E-9 T 14-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 DB29_00812 da20a5bf739439042a7bed50da8db94e 416 PRINTS PR00447 Natural resistance-associated macrophage protein signature 202 225 2.2E-9 T 14-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 DB29_00812 da20a5bf739439042a7bed50da8db94e 416 PRINTS PR00447 Natural resistance-associated macrophage protein signature 153 174 2.2E-9 T 14-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 DB29_00812 da20a5bf739439042a7bed50da8db94e 416 Pfam PF01566 Natural resistance-associated macrophage protein 38 385 1.8E-91 T 14-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 DB29_03848 71e0d2c9bd4c98aa5b59578d59726c24 71 Pfam PF09680 Protein of unknown function (Tiny_TM_bacill) 29 52 1.9E-13 T 14-10-2018 IPR010070 Sporulation protein YjcZ-like DB29_03848 71e0d2c9bd4c98aa5b59578d59726c24 71 TIGRFAM TIGR01732 tiny_TM_bacill: conserved hypothetical protein 25 51 2.4E-12 T 14-10-2018 IPR010070 Sporulation protein YjcZ-like DB29_02450 e14f4ac06e20b0771e0820abfaede9de 152 PIRSF PIRSF021320 2 152 1.0E-59 T 14-10-2018 IPR009326 Protein of unknown function DUF984 DB29_02450 e14f4ac06e20b0771e0820abfaede9de 152 SMART SM01022 27 150 2.0E-51 T 14-10-2018 IPR007374 ASCH domain DB29_02450 e14f4ac06e20b0771e0820abfaede9de 152 Pfam PF04266 ASCH domain 35 150 5.4E-29 T 14-10-2018 IPR007374 ASCH domain DB29_02450 e14f4ac06e20b0771e0820abfaede9de 152 SUPERFAMILY SSF88697 4 150 5.47E-57 T 14-10-2018 IPR015947 PUA-like superfamily DB29_02450 e14f4ac06e20b0771e0820abfaede9de 152 Gene3D G3DSA:3.10.400.10 3 152 6.1E-60 T 14-10-2018 DB29_01925 46558c6ffd71ba7f0a6af93955a97a85 159 Pfam PF02542 YgbB family 2 156 4.0E-65 T 14-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 DB29_01925 46558c6ffd71ba7f0a6af93955a97a85 159 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 36 51 - T 14-10-2018 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 DB29_01925 46558c6ffd71ba7f0a6af93955a97a85 159 Gene3D G3DSA:3.30.1330.50 1 159 8.6E-69 T 14-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 DB29_01925 46558c6ffd71ba7f0a6af93955a97a85 159 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 3 157 8.1E-69 T 14-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 DB29_01925 46558c6ffd71ba7f0a6af93955a97a85 159 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 2 157 36.844 T 14-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 DB29_01925 46558c6ffd71ba7f0a6af93955a97a85 159 SUPERFAMILY SSF69765 1 157 1.83E-65 T 14-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 DB29_03115 b28625ba22d5e1b1e5cbf0113da59517 250 SUPERFAMILY SSF53448 5 224 8.7E-57 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DB29_03115 b28625ba22d5e1b1e5cbf0113da59517 250 Gene3D G3DSA:3.90.550.10 1 239 1.9E-59 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DB29_03115 b28625ba22d5e1b1e5cbf0113da59517 250 Pfam PF00535 Glycosyl transferase family 2 8 124 2.5E-35 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 DB29_04012 8f52ccf34b009b7152889a290ffe1283 149 TIGRFAM TIGR02473 flagell_FliJ: flagellar export protein FliJ 6 146 4.4E-19 T 14-10-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 DB29_04012 8f52ccf34b009b7152889a290ffe1283 149 Pfam PF02050 Flagellar FliJ protein 21 144 1.7E-12 T 14-10-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 DB29_00218 3216e0ec0e2389d7ebff11397b2b5b1c 54 Pfam PF13072 Protein of unknown function (DUF3936) 1 36 5.9E-9 T 14-10-2018 IPR025177 Cell division inhibitor MciZ DB29_00245 9b40bd32c15a7b475178a0e8ed437b7a 144 SUPERFAMILY SSF158397 27 143 7.32E-25 T 14-10-2018 IPR024042 TM1646-like domain superfamily DB29_00245 9b40bd32c15a7b475178a0e8ed437b7a 144 Pfam PF03885 Protein of unknown function (DUF327) 21 143 2.1E-29 T 14-10-2018 IPR005585 Protein of unknown function DUF327 DB29_00245 9b40bd32c15a7b475178a0e8ed437b7a 144 Gene3D G3DSA:1.20.120.490 25 144 6.8E-27 T 14-10-2018 IPR024042 TM1646-like domain superfamily DB29_01505 a631bb21c6066f334d18ddcb2d8b6d58 369 Gene3D G3DSA:3.30.9.10 87 310 6.0E-74 T 14-10-2018 DB29_01505 a631bb21c6066f334d18ddcb2d8b6d58 369 SUPERFAMILY SSF54373 220 309 1.44E-12 T 14-10-2018 DB29_01505 a631bb21c6066f334d18ddcb2d8b6d58 369 SUPERFAMILY SSF51905 3 368 4.79E-38 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB29_01505 a631bb21c6066f334d18ddcb2d8b6d58 369 Gene3D G3DSA:3.50.50.60 4 350 6.0E-74 T 14-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily DB29_01505 a631bb21c6066f334d18ddcb2d8b6d58 369 Pfam PF01266 FAD dependent oxidoreductase 3 350 9.2E-49 T 14-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 DB29_00163 ad4d7fdec88a27aa44b28d7d39275513 116 TIGRFAM TIGR02839 spore_V_AE: stage V sporulation protein AE 3 116 7.7E-53 T 14-10-2018 IPR014204 Sporulation stage V, protein AE DB29_00163 ad4d7fdec88a27aa44b28d7d39275513 116 Pfam PF03862 SpoVAC/SpoVAEB sporulation membrane protein 3 110 2.2E-39 T 14-10-2018 IPR005562 SpoVA DB29_00468 bf27a1022f58265593c8456c2a837bca 278 Pfam PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) 14 268 5.4E-29 T 14-10-2018 IPR019076 Sporulation lipoprotein YhcN/YlaJ-like DB29_04245 2e5695e3821a2e1d0ad01ee2bed3361d 89 Pfam PF06946 Bacteriophage A118-like holin, Hol118 3 81 1.4E-9 T 14-10-2018 IPR009708 Bacteriophage A118, holin DB29_02645 3858ccd3444537ffa6c09ea4bffd470c 157 Pfam PF17353 Family of unknown function (DUF5381) 5 142 6.3E-9 T 14-10-2018 IPR035324 Protein of unknown function DUF5381 DB29_01798 3a9dacec379b3f69c66de34896781aac 256 SUPERFAMILY SSF81301 4 123 1.88E-18 T 14-10-2018 DB29_01798 3a9dacec379b3f69c66de34896781aac 256 Gene3D G3DSA:3.30.460.10 3 129 2.9E-35 T 14-10-2018 DB29_01798 3a9dacec379b3f69c66de34896781aac 256 Gene3D G3DSA:1.20.120.330 131 256 9.3E-49 T 14-10-2018 DB29_01798 3a9dacec379b3f69c66de34896781aac 256 SUPERFAMILY SSF81593 130 256 1.57E-69 T 14-10-2018 DB29_01798 3a9dacec379b3f69c66de34896781aac 256 Pfam PF07827 KNTase C-terminal domain 117 248 2.0E-62 T 14-10-2018 IPR012481 Kanamycin nucleotidyltransferase, C-terminal GO:0016779|GO:0046677 DB29_02394 27de4bd00268a050a3ac0daa309fd948 369 SMART SM00028 94 127 270.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DB29_02394 27de4bd00268a050a3ac0daa309fd948 369 SMART SM00028 134 167 0.0026 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DB29_02394 27de4bd00268a050a3ac0daa309fd948 369 SMART SM00028 213 246 85.0 T 14-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 DB29_02394 27de4bd00268a050a3ac0daa309fd948 369 Gene3D G3DSA:1.25.40.10 1 365 4.2E-77 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DB29_02394 27de4bd00268a050a3ac0daa309fd948 369 SUPERFAMILY SSF48452 96 215 9.29E-11 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DB29_02190 742a6915d179355c7f935c87a0320e9e 211 Gene3D G3DSA:3.90.79.10 1 164 1.0E-38 T 14-10-2018 DB29_02190 742a6915d179355c7f935c87a0320e9e 211 SUPERFAMILY SSF55811 4 154 2.03E-26 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 DB29_02190 742a6915d179355c7f935c87a0320e9e 211 Pfam PF00293 NUDIX domain 31 148 1.1E-11 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 DB29_02856 1a541184fe3ab6db6626613f27433672 465 Pfam PF10011 Predicted membrane protein (DUF2254) 28 391 2.0E-93 T 14-10-2018 IPR018723 Protein of unknown function DUF2254, membrane DB29_01419 c7016c6d2294486673c771dc2c15c40a 164 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 27 155 1.5E-30 T 14-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ DB29_03742 2e24afe2d170535a81cf0d44a7759db2 207 SMART SM00954 42 163 2.8E-40 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 DB29_03742 2e24afe2d170535a81cf0d44a7759db2 207 SUPERFAMILY SSF81301 1 196 1.01E-58 T 14-10-2018 DB29_03742 2e24afe2d170535a81cf0d44a7759db2 207 Gene3D G3DSA:3.30.460.10 1 145 1.0E-50 T 14-10-2018 DB29_03742 2e24afe2d170535a81cf0d44a7759db2 207 Pfam PF04607 Region found in RelA / SpoT proteins 42 161 1.2E-36 T 14-10-2018 IPR007685 RelA/SpoT GO:0015969 DB29_03742 2e24afe2d170535a81cf0d44a7759db2 207 Gene3D G3DSA:1.10.287.860 146 207 7.3E-26 T 14-10-2018 DB29_01457 54885f9ecee095270155298cb7cb8b0f 439 Gene3D G3DSA:3.20.20.150 2 439 4.7E-186 T 14-10-2018 DB29_01457 54885f9ecee095270155298cb7cb8b0f 439 PRINTS PR00688 Xylose isomerase signature 227 251 5.0E-97 T 14-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 DB29_01457 54885f9ecee095270155298cb7cb8b0f 439 PRINTS PR00688 Xylose isomerase signature 269 296 5.0E-97 T 14-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 DB29_01457 54885f9ecee095270155298cb7cb8b0f 439 PRINTS PR00688 Xylose isomerase signature 178 199 5.0E-97 T 14-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 DB29_01457 54885f9ecee095270155298cb7cb8b0f 439 PRINTS PR00688 Xylose isomerase signature 154 173 5.0E-97 T 14-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 DB29_01457 54885f9ecee095270155298cb7cb8b0f 439 PRINTS PR00688 Xylose isomerase signature 205 224 5.0E-97 T 14-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 DB29_01457 54885f9ecee095270155298cb7cb8b0f 439 PRINTS PR00688 Xylose isomerase signature 131 151 5.0E-97 T 14-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 DB29_01457 54885f9ecee095270155298cb7cb8b0f 439 PRINTS PR00688 Xylose isomerase signature 298 309 5.0E-97 T 14-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 DB29_01457 54885f9ecee095270155298cb7cb8b0f 439 PRINTS PR00688 Xylose isomerase signature 331 342 5.0E-97 T 14-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 DB29_01457 54885f9ecee095270155298cb7cb8b0f 439 PRINTS PR00688 Xylose isomerase signature 90 112 5.0E-97 T 14-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 DB29_01457 54885f9ecee095270155298cb7cb8b0f 439 Hamap MF_00455 Xylose isomerase [xylA]. 10 434 55.168 T 14-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 DB29_01457 54885f9ecee095270155298cb7cb8b0f 439 SUPERFAMILY SSF51658 3 437 1.4E-175 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily DB29_01457 54885f9ecee095270155298cb7cb8b0f 439 TIGRFAM TIGR02630 xylose_isom_A: xylose isomerase 3 434 8.9E-217 T 14-10-2018 IPR013452 Xylose isomerase, bacterial-type GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 DB29_02259 1976366a3eaf2f93e14d07b43953fc08 78 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 2 74 8.9E-18 T 14-10-2018 IPR008407 Branched-chain amino acid transport, AzlD DB29_02104 452339869d098261ce5bf4214ac8d5c0 280 Pfam PF03613 PTS system mannose/fructose/sorbose family IID component 17 280 3.5E-106 T 14-10-2018 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 DB29_01717 c01a797d2ea22707daa2eeabc781b4c6 60 Gene3D G3DSA:1.25.40.10 1 60 3.6E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DB29_00625 1f2464f8ee44b665bdcd6eb2130e21e2 117 TIGRFAM TIGR03578 EF_0831: conserved hypothetical protein EF_0831/AHA_3912 2 97 1.1E-42 T 14-10-2018 IPR020037 Protein of unknown function DUF4312 DB29_00625 1f2464f8ee44b665bdcd6eb2130e21e2 117 Pfam PF14189 Domain of unknown function (DUF4312) 6 87 1.5E-33 T 14-10-2018 IPR020037 Protein of unknown function DUF4312 DB29_02016 bb3c098718314d790d9361b4d0438659 87 TIGRFAM TIGR02862 spore_BofA: pro-sigmaK processing inhibitor BofA 4 86 3.9E-26 T 14-10-2018 IPR010001 SigmaK-factor processing regulatory BofA DB29_02016 bb3c098718314d790d9361b4d0438659 87 Pfam PF07441 SigmaK-factor processing regulatory protein BofA 12 83 1.4E-17 T 14-10-2018 IPR010001 SigmaK-factor processing regulatory BofA DB29_02295 6ff646e73fe15ac10e73e19d1e0a6d13 185 Pfam PF08741 YwhD family 14 177 6.0E-80 T 14-10-2018 IPR014852 Uncharacterised protein YwhD DB29_03288 4f15af3246eca5e810c804ef7ce82104 497 Pfam PF01970 Tripartite tricarboxylate transporter TctA family 18 435 1.0E-135 T 14-10-2018 IPR002823 Protein of unknown function DUF112, transmembrane DB29_00379 7e765750e43f5e0fd20fca000655dc02 140 TIGRFAM TIGR01300 CPA3_mnhG_phaG: monovalent cation/proton antiporter, MnhG/PhaG subunit 11 106 6.8E-26 T 14-10-2018 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:1902600 DB29_00379 7e765750e43f5e0fd20fca000655dc02 140 Pfam PF03334 Na+/H+ antiporter subunit 11 92 8.9E-25 T 14-10-2018 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:1902600 DB29_02796 75b56501423a3da12c8bba0ab75e431b 277 SUPERFAMILY SSF161098 12 277 3.27E-70 T 14-10-2018 IPR035906 MetI-like superfamily DB29_02796 75b56501423a3da12c8bba0ab75e431b 277 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 98 269 4.3E-19 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DB29_02796 75b56501423a3da12c8bba0ab75e431b 277 Gene3D G3DSA:1.10.3720.10 2 265 1.2E-62 T 14-10-2018 IPR035906 MetI-like superfamily DB29_02087 b547f39c569f335d32c2cb352b4f43a6 298 Pfam PF09648 YycH protein 30 261 8.6E-56 T 14-10-2018 IPR018604 Regulatory protein YycH-like GO:0016021 DB29_02087 b547f39c569f335d32c2cb352b4f43a6 298 Gene3D G3DSA:3.10.450.660 49 263 1.0E-30 T 14-10-2018 DB29_02087 b547f39c569f335d32c2cb352b4f43a6 298 Gene3D G3DSA:3.30.310.160 71 189 1.0E-30 T 14-10-2018 DB29_02993 de244394c36af22862758f27a2ddaca9 248 Pfam PF01261 Xylose isomerase-like TIM barrel 23 194 3.3E-18 T 14-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain DB29_02993 de244394c36af22862758f27a2ddaca9 248 Gene3D G3DSA:3.20.20.150 1 247 3.1E-71 T 14-10-2018 DB29_02993 de244394c36af22862758f27a2ddaca9 248 SUPERFAMILY SSF51658 4 247 2.02E-42 T 14-10-2018 IPR036237 Xylose isomerase-like superfamily DB29_03791 9922390e5e6d669f734f4718c5af2ab6 68 TIGRFAM TIGR02848 spore_III_AC: stage III sporulation protein AC 4 66 3.4E-31 T 14-10-2018 IPR009570 Stage III sporulation protein AC DB29_03791 9922390e5e6d669f734f4718c5af2ab6 68 Pfam PF06686 Stage III sporulation protein AC/AD protein family 8 62 3.8E-17 T 14-10-2018 IPR025664 Stage III sporulation protein AC/AD family DB29_00077 52c43b5223c63302ea87261261f5cbe3 163 SUPERFAMILY SSF50022 6 156 5.11E-30 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 DB29_00077 52c43b5223c63302ea87261261f5cbe3 163 PRINTS PR00162 Rieske 2Fe-2S subunit signature 117 129 5.8E-5 T 14-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 DB29_00077 52c43b5223c63302ea87261261f5cbe3 163 PRINTS PR00162 Rieske 2Fe-2S subunit signature 96 107 5.8E-5 T 14-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 DB29_00077 52c43b5223c63302ea87261261f5cbe3 163 Gene3D G3DSA:2.102.10.10 68 162 1.6E-26 T 14-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 DB29_00077 52c43b5223c63302ea87261261f5cbe3 163 Pfam PF00355 Rieske [2Fe-2S] domain 82 145 3.2E-14 T 14-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 DB29_03781 0d187a4ebb3123717586ef31092443b0 131 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 6 120 2.0E-51 T 14-10-2018 DB29_00605 ecd9c61586822cac52c7ac246a3b072b 112 Gene3D G3DSA:3.40.50.300 3 87 1.4E-8 T 14-10-2018 DB29_00605 ecd9c61586822cac52c7ac246a3b072b 112 SUPERFAMILY SSF52540 28 69 9.74E-8 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_00605 ecd9c61586822cac52c7ac246a3b072b 112 Pfam PF13476 AAA domain 15 71 7.7E-9 T 14-10-2018 IPR038729 Rad50/SbcC-type AAA domain DB29_01011 ebde8c39bf28f5fdff390f0e97ede854 595 TIGRFAM TIGR00795 lctP: transporter, lactate permease (LctP) family 7 544 8.7E-104 T 14-10-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 DB29_01011 ebde8c39bf28f5fdff390f0e97ede854 595 Pfam PF02652 L-lactate permease 7 544 3.4E-106 T 14-10-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 DB29_01818 d8d863e0b978f0c2f24ca193f5c22339 431 Gene3D G3DSA:3.90.1200.10 235 403 4.0E-6 T 14-10-2018 DB29_01818 d8d863e0b978f0c2f24ca193f5c22339 431 Pfam PF01636 Phosphotransferase enzyme family 294 370 2.3E-6 T 14-10-2018 IPR002575 Aminoglycoside phosphotransferase DB29_01818 d8d863e0b978f0c2f24ca193f5c22339 431 SUPERFAMILY SSF56112 132 419 6.56E-25 T 14-10-2018 IPR011009 Protein kinase-like domain superfamily DB29_00040 3476a46025a251076312ccdd09516700 250 Pfam PF14171 Toxin SpoIISA, type II toxin-antitoxin system 3 238 2.8E-88 T 14-10-2018 IPR025940 Toxin SpoIISA, type II toxin-antitoxin system GO:0009405|GO:0016021 DB29_00040 3476a46025a251076312ccdd09516700 250 Gene3D G3DSA:3.30.70.2720 128 248 8.8E-44 T 14-10-2018 DB29_00040 3476a46025a251076312ccdd09516700 250 ProDom PD120066 SPORULATION STAGE SA II SPOIISA TRANSMEMBRANE MEMBRANE KILLER 21 245 2.0E-118 T 14-10-2018 DB29_03231 d039b47bcf32c05f211288ac6992ce43 294 Pfam PF02687 FtsX-like permease family 197 286 8.2E-7 T 14-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 DB29_03231 d039b47bcf32c05f211288ac6992ce43 294 PIRSF PIRSF003097 1 294 3.6E-80 T 14-10-2018 IPR004513 Cell division protein FtsX GO:0016021 DB29_03231 d039b47bcf32c05f211288ac6992ce43 294 Gene3D G3DSA:3.30.70.3040 56 152 3.4E-6 T 14-10-2018 DB29_02182 0f3f3c42ec0e6feaf7c34e3208e8c589 187 Pfam PF06042 Nucleotidyltransferase 24 185 9.5E-59 T 14-10-2018 IPR009267 Putative nucleotidyltransferase DB29_02254 ea4887907c8c7c4cfcd9389e7bf679f3 328 Pfam PF00487 Fatty acid desaturase 52 286 2.0E-41 T 14-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 DB29_00031 57805cef12c1a7a18467eba33df79669 88 Pfam PF00550 Phosphopantetheine attachment site 9 78 9.5E-9 T 14-10-2018 IPR009081 Phosphopantetheine binding ACP domain DB29_00031 57805cef12c1a7a18467eba33df79669 88 Gene3D G3DSA:1.10.1200.10 1 86 1.4E-15 T 14-10-2018 IPR036736 ACP-like superfamily DB29_00031 57805cef12c1a7a18467eba33df79669 88 SUPERFAMILY SSF47336 3 81 8.51E-15 T 14-10-2018 IPR036736 ACP-like superfamily DB29_01783 fcd9e1397a62ac8faac25584d8ac89c3 203 Pfam PF12535 Hydrolase of X-linked nucleoside diphosphate N terminal 4 58 3.9E-24 T 14-10-2018 DB29_01783 fcd9e1397a62ac8faac25584d8ac89c3 203 Gene3D G3DSA:3.90.79.10 42 199 1.9E-36 T 14-10-2018 DB29_01783 fcd9e1397a62ac8faac25584d8ac89c3 203 SUPERFAMILY SSF55811 45 197 4.6E-28 T 14-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 DB29_01783 fcd9e1397a62ac8faac25584d8ac89c3 203 Pfam PF00293 NUDIX domain 72 178 8.0E-11 T 14-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 DB29_00131 f9fe21b3e187452ca0977c9fdd9533f0 353 Pfam PF03706 Lysylphosphatidylglycerol synthase TM region 12 322 1.1E-46 T 14-10-2018 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD DB29_00131 f9fe21b3e187452ca0977c9fdd9533f0 353 TIGRFAM TIGR00374 TIGR00374: TIGR00374 family protein 12 327 1.9E-28 T 14-10-2018 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD DB29_02128 cbd97ab433c92e3023e555835f366d60 342 Gene3D G3DSA:2.60.40.1630 64 187 3.3E-11 T 14-10-2018 DB29_02128 cbd97ab433c92e3023e555835f366d60 342 Pfam PF13786 Domain of unknown function (DUF4179) 36 124 8.6E-16 T 14-10-2018 IPR025436 Domain of unknown function DUF4179 DB29_02128 cbd97ab433c92e3023e555835f366d60 342 Gene3D G3DSA:2.60.40.1640 204 339 2.9E-5 T 14-10-2018 DB29_02532 fd81b0cbee106c2bb2f1e85d6e8c20ce 123 Pfam PF01638 HxlR-like helix-turn-helix 23 111 2.1E-35 T 14-10-2018 IPR002577 Helix-turn-helix, HxlR type DB29_02532 fd81b0cbee106c2bb2f1e85d6e8c20ce 123 Gene3D G3DSA:1.10.10.10 1 119 5.7E-39 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_02532 fd81b0cbee106c2bb2f1e85d6e8c20ce 123 SUPERFAMILY SSF46785 10 115 4.36E-33 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_00692 5492d90decc4e389ec97ee5ebd6442dd 267 Pfam PF14167 YfkD-like protein 36 267 4.8E-118 T 14-10-2018 IPR025548 YfkD-like protein DB29_02550 e3a532cd9ed21e2557b27b1311f920c1 112 Pfam PF02255 PTS system, Lactose/Cellobiose specific IIA subunit 7 97 4.6E-33 T 14-10-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 DB29_02550 e3a532cd9ed21e2557b27b1311f920c1 112 PIRSF PIRSF000699 1 105 1.5E-32 T 14-10-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 DB29_02550 e3a532cd9ed21e2557b27b1311f920c1 112 Gene3D G3DSA:1.20.58.280 1 103 2.1E-34 T 14-10-2018 DB29_02550 e3a532cd9ed21e2557b27b1311f920c1 112 SUPERFAMILY SSF46973 2 98 2.75E-33 T 14-10-2018 IPR036542 Phosphotransferase system, lactose/cellobiose-type IIA subunit superfamily GO:0009401 DB29_00865 1bd80680145f0605868521255c39cd1e 388 Pfam PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus 5 386 1.3E-147 T 14-10-2018 IPR007392 D-galactarate/Altronate dehydratase, C-terminal GO:0016829 DB29_03465 4e35bfe77a99efcbc8898821e41f330e 104 SUPERFAMILY SSF143100 19 73 2.88E-7 T 14-10-2018 IPR035069 TTHA1013/TTHA0281-like DB29_03338 d20be6a86db9001e286e7b74eaa23b98 92 Pfam PF17279 Family of unknown function (DUF5344) 2 88 5.5E-21 T 14-10-2018 DB29_01484 fffe513f5273a2c1984e4f97cae1f0b4 455 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 9 447 7.7E-91 T 14-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 DB29_01484 fffe513f5273a2c1984e4f97cae1f0b4 455 Pfam PF02447 GntP family permease 8 447 5.5E-99 T 14-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 DB29_04313 c3729922cd7cbb88bc58315ad2a78796 124 SUPERFAMILY SSF140415 3 119 2.22E-35 T 14-10-2018 IPR023351 YppE-like superfamily DB29_04313 c3729922cd7cbb88bc58315ad2a78796 124 Pfam PF08807 Bacterial domain of unknown function (DUF1798) 8 116 1.1E-32 T 14-10-2018 IPR014913 Protein of unknown function DUF1798 DB29_04313 c3729922cd7cbb88bc58315ad2a78796 124 Gene3D G3DSA:1.20.120.440 1 124 1.9E-35 T 14-10-2018 IPR023351 YppE-like superfamily DB29_03671 fe9ed3cfb7cf95c6e894f63a5d0b9eca 856 SUPERFAMILY SSF52540 4 416 6.05E-5 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_03671 fe9ed3cfb7cf95c6e894f63a5d0b9eca 856 Pfam PF12705 PD-(D/E)XK nuclease superfamily 541 835 5.3E-38 T 14-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type DB29_03671 fe9ed3cfb7cf95c6e894f63a5d0b9eca 856 SUPERFAMILY SSF52980 564 759 1.55E-6 T 14-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 DB29_02831 f458b8579d281577033c8cacb6b652cb 314 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 81 304 4.7E-9 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DB29_02831 f458b8579d281577033c8cacb6b652cb 314 SUPERFAMILY SSF161098 72 301 1.44E-59 T 14-10-2018 IPR035906 MetI-like superfamily DB29_02831 f458b8579d281577033c8cacb6b652cb 314 Gene3D G3DSA:1.10.3720.10 68 311 5.6E-69 T 14-10-2018 IPR035906 MetI-like superfamily DB29_02400 ff18cc48d36393df9f2cd61ccf1ec097 87 Pfam PF17279 Family of unknown function (DUF5344) 1 85 1.7E-19 T 14-10-2018 DB29_01530 3697ac227723e426eebfd03fc06eb166 229 Gene3D G3DSA:3.90.550.10 17 185 1.7E-5 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DB29_01530 3697ac227723e426eebfd03fc06eb166 229 SUPERFAMILY SSF53448 12 194 3.83E-8 T 14-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases DB29_01530 3697ac227723e426eebfd03fc06eb166 229 Pfam PF00535 Glycosyl transferase family 2 42 140 1.6E-5 T 14-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 DB29_00748 85499f84d4563e9ffa90145290565b96 126 Gene3D G3DSA:3.10.450.50 2 113 6.4E-16 T 14-10-2018 DB29_00748 85499f84d4563e9ffa90145290565b96 126 Pfam PF14534 Domain of unknown function (DUF4440) 9 106 1.3E-12 T 14-10-2018 IPR027843 Domain of unknown function DUF4440 DB29_00748 85499f84d4563e9ffa90145290565b96 126 SUPERFAMILY SSF54427 5 113 1.19E-21 T 14-10-2018 IPR032710 NTF2-like domain superfamily DB29_02502 d8e264c80780a1f4da35b52135ce3ddf 119 Gene3D G3DSA:1.10.357.10 2 117 3.8E-18 T 14-10-2018 DB29_02502 d8e264c80780a1f4da35b52135ce3ddf 119 SUPERFAMILY SSF48498 11 110 2.0E-16 T 14-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily DB29_02356 9b3ee0338fc537c3f42dc7e4dac71591 115 Pfam PF00893 Small Multidrug Resistance protein 4 92 1.5E-20 T 14-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 DB29_02356 9b3ee0338fc537c3f42dc7e4dac71591 115 SUPERFAMILY SSF103481 7 101 6.8E-13 T 14-10-2018 DB29_02356 9b3ee0338fc537c3f42dc7e4dac71591 115 Gene3D G3DSA:1.10.3730.20 2 105 1.1E-20 T 14-10-2018 DB29_03725 08660e7bbfda0eb83d87d14b9d3b278d 193 SUPERFAMILY SSF52833 7 180 1.33E-31 T 14-10-2018 IPR036249 Thioredoxin-like superfamily DB29_03725 08660e7bbfda0eb83d87d14b9d3b278d 193 Pfam PF00578 AhpC/TSA family 49 168 1.3E-16 T 14-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 DB29_03725 08660e7bbfda0eb83d87d14b9d3b278d 193 Gene3D G3DSA:3.40.30.10 32 184 1.7E-32 T 14-10-2018 DB29_04248 b1a8404bdfda13141aebb86f31c4359b 510 Pfam PF04740 LXG domain of WXG superfamily 3 198 4.3E-55 T 14-10-2018 IPR006829 LXG domain DB29_04215 0b949d6a5eb35f47addf3f836cb827ce 66 Pfam PF17356 Phage-like element PBSX protein XtrA 1 66 4.3E-21 T 14-10-2018 IPR035530 Phage-like element PBSX protein XtrA DB29_00688 961d4ab40358d16c110c53ee70acc233 273 Pfam PF04018 Domain of unknown function (DUF368) 13 242 2.6E-46 T 14-10-2018 IPR007163 Protein of unknown function DUF368 DB29_00533 f132efb0bd32121f46bd94989cd16c22 211 Gene3D G3DSA:3.90.850.10 1 210 9.6E-53 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 DB29_00533 f132efb0bd32121f46bd94989cd16c22 211 SUPERFAMILY SSF56529 4 198 3.79E-51 T 14-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 DB29_00533 f132efb0bd32121f46bd94989cd16c22 211 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 7 196 4.9E-36 T 14-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 DB29_02186 97bbfa400e58ce9ff11b95388703eacc 435 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 16 419 3.4E-134 T 14-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 DB29_02186 97bbfa400e58ce9ff11b95388703eacc 435 Pfam PF05525 Branched-chain amino acid transport protein 9 431 3.3E-147 T 14-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 DB29_04324 6b5a2d27fc5978ec0b10b48e3e1f1923 160 Pfam PF03703 Bacterial PH domain 74 150 1.2E-17 T 14-10-2018 IPR005182 Domain of unknown function DUF304 DB29_01688 370f1bc5edadde7f67f34e02b0d69322 192 ProDom PD102989 YKOP PLASMID 7 185 5.0E-95 T 14-10-2018 DB29_03554 443c48d8e256f881f19a2316b96ad69b 332 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 141 204 1.3E-5 T 14-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 DB29_03554 443c48d8e256f881f19a2316b96ad69b 332 SUPERFAMILY SSF51735 4 157 1.74E-52 T 14-10-2018 IPR036291 NAD(P)-binding domain superfamily DB29_03554 443c48d8e256f881f19a2316b96ad69b 332 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 6 123 1.3E-26 T 14-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 DB29_03554 443c48d8e256f881f19a2316b96ad69b 332 Gene3D G3DSA:3.30.360.10 134 324 2.1E-88 T 14-10-2018 DB29_03554 443c48d8e256f881f19a2316b96ad69b 332 SUPERFAMILY SSF55347 134 297 1.47E-37 T 14-10-2018 DB29_03554 443c48d8e256f881f19a2316b96ad69b 332 Gene3D G3DSA:3.40.50.720 10 307 2.1E-88 T 14-10-2018 DB29_02130 33546675d1d03fe2f68e2c0d15cd0a3d 166 Gene3D G3DSA:3.40.630.30 2 164 4.8E-34 T 14-10-2018 DB29_02130 33546675d1d03fe2f68e2c0d15cd0a3d 166 Pfam PF13673 Acetyltransferase (GNAT) domain 32 144 2.4E-15 T 14-10-2018 IPR000182 GNAT domain DB29_02130 33546675d1d03fe2f68e2c0d15cd0a3d 166 SUPERFAMILY SSF55729 8 163 5.32E-29 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase DB29_00073 ab54fc25ffa001748f034cb3cef768fe 257 TIGRFAM TIGR02878 spore_ypjB: sporulation protein YpjB 28 256 1.0E-100 T 14-10-2018 IPR014231 Sporulation protein YpjB DB29_00073 ab54fc25ffa001748f034cb3cef768fe 257 Pfam PF09577 Sporulation protein YpjB (SpoYpjB) 29 254 1.1E-83 T 14-10-2018 IPR014231 Sporulation protein YpjB DB29_01167 a70b94b6236d867236f54fb594ce9931 158 SMART SM00895 21 146 2.5E-18 T 14-10-2018 IPR011711 GntR, C-terminal DB29_01167 a70b94b6236d867236f54fb594ce9931 158 SUPERFAMILY SSF48008 17 154 8.11E-27 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DB29_01167 a70b94b6236d867236f54fb594ce9931 158 Pfam PF07729 FCD domain 21 145 2.8E-24 T 14-10-2018 IPR011711 GntR, C-terminal DB29_01167 a70b94b6236d867236f54fb594ce9931 158 Gene3D G3DSA:1.20.120.530 15 151 1.8E-26 T 14-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal DB29_03875 26a85dfc7ea7d4d288034b237e6cf77d 170 ProDom PD094668 YLAL SIMILAR MW0994 BH2628 SE0810 SA0960 5 168 7.0E-92 T 14-10-2018 IPR020229 Uncharacterised protein YlaL DB29_04166 fd2e62df904cd12927a6dd1a809d50d8 244 Pfam PF01061 ABC-2 type transporter 9 205 6.6E-7 T 14-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 DB29_02629 611058c2f2e703d63c7230e468318d98 464 Pfam PF03787 RAMP superfamily 23 180 6.1E-10 T 14-10-2018 IPR005537 CRISPR type III-associated RAMP protein DB29_02629 611058c2f2e703d63c7230e468318d98 464 Pfam PF03787 RAMP superfamily 277 430 1.9E-6 T 14-10-2018 IPR005537 CRISPR type III-associated RAMP protein DB29_03327 f5f7383574d266f7aef89a33e7a33331 45 Pfam PF14149 YhfH-like protein 3 39 1.4E-18 T 14-10-2018 IPR025432 YhfH-like protein DB29_01853 554fc0cf2e166ee6ea6e513a334e3646 195 TIGRFAM TIGR04032 toxin_SdpC: antimicrobial peptide, SdpC family 30 192 1.3E-49 T 14-10-2018 IPR023888 Antimicrobial peptide, SdpC family DB29_00137 37171bdf46a445ec7eb0066aef212d9c 137 ProDom PD089241 YPBF MEMBRANE BH1610 TRANSMEMBRANE 8 137 5.0E-48 T 14-10-2018 IPR020210 Uncharacterised protein family, YpbF, transmembrane DB29_00137 37171bdf46a445ec7eb0066aef212d9c 137 Pfam PF10864 Protein of unknown function (DUF2663) 10 135 1.7E-41 T 14-10-2018 IPR020210 Uncharacterised protein family, YpbF, transmembrane DB29_02928 b65b7d65cbfa027913ae97a9a068c676 346 Gene3D G3DSA:3.30.460.10 5 120 2.0E-6 T 14-10-2018 DB29_03878 efda7d436ec40ef8e3a9dfedb27f1a38 304 Pfam PF02628 Cytochrome oxidase assembly protein 10 291 5.7E-39 T 14-10-2018 IPR003780 COX15/CtaA family GO:0006784|GO:0016021|GO:0016627|GO:0055114 Reactome: R-HSA-189451 DB29_03878 efda7d436ec40ef8e3a9dfedb27f1a38 304 Hamap MF_01664 Heme A synthase [ctaA]. 4 304 27.553 T 14-10-2018 IPR023755 Heme A synthase, type 1 GO:0006784|GO:0016020|GO:0016627|GO:0055114 DB29_02092 426ed47a42c7b778cf58b58f8bc73592 301 Pfam PF08878 Domain of unknown function (DUF1837) 46 285 9.4E-54 T 14-10-2018 IPR014976 Protein of unknown function DUF1837 DB29_04362 f203e94d21c578cdd0c0cda2d78dfb81 92 ProDom PD062992 CYTOSOLIC YPZA BH2151 12 87 1.0E-35 T 14-10-2018 IPR020314 Uncharacterised protein family YpzA DB29_04362 f203e94d21c578cdd0c0cda2d78dfb81 92 Pfam PF10819 Protein of unknown function (DUF2564) 10 88 4.0E-33 T 14-10-2018 IPR020314 Uncharacterised protein family YpzA DB29_00641 ef55b72fe850edb07e54b7d3f1e7fa7a 174 Gene3D G3DSA:3.40.50.300 4 174 1.7E-17 T 14-10-2018 DB29_00641 ef55b72fe850edb07e54b7d3f1e7fa7a 174 SUPERFAMILY SSF52540 4 173 1.83E-16 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_01473 bcbf647825f666a1a7f97775550cc9b2 320 Gene3D G3DSA:1.10.3720.10 73 320 9.1E-60 T 14-10-2018 IPR035906 MetI-like superfamily DB29_01473 bcbf647825f666a1a7f97775550cc9b2 320 SUPERFAMILY SSF161098 77 304 1.2E-49 T 14-10-2018 IPR035906 MetI-like superfamily DB29_01473 bcbf647825f666a1a7f97775550cc9b2 320 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 111 312 3.0E-15 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DB29_02895 0281f4e780d4662076716d6429a663cd 886 Pfam PF03639 Glycosyl hydrolase family 81 60 690 7.9E-76 T 14-10-2018 IPR005200 Endo-1,3(4)-beta-glucanase GO:0052861 DB29_00207 67c180090233844609196d0f6e8b203f 65 ProDom PD054650 YYCD 1 65 1.0E-32 T 14-10-2018 IPR020086 Uncharacterised protein family YycD DB29_00207 67c180090233844609196d0f6e8b203f 65 Pfam PF09954 Uncharacterized protein conserved in bacteria (DUF2188) 4 60 5.7E-12 T 14-10-2018 IPR018691 Protein of unknown function DUF2188 DB29_03035 25b33cb8ca91e11d179b7fe6be8855e9 173 SUPERFAMILY SSF55729 3 163 6.32E-33 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase DB29_03035 25b33cb8ca91e11d179b7fe6be8855e9 173 Gene3D G3DSA:3.40.630.30 1 172 2.3E-49 T 14-10-2018 DB29_03035 25b33cb8ca91e11d179b7fe6be8855e9 173 Pfam PF00583 Acetyltransferase (GNAT) family 47 147 2.4E-16 T 14-10-2018 IPR000182 GNAT domain DB29_00831 287362ed73bc89c9b7657e832fc12ae3 333 Pfam PF07663 Sorbitol phosphotransferase enzyme II C-terminus 239 331 2.7E-44 T 14-10-2018 IPR011638 Sorbitol phosphotransferase enzyme II, C-terminal GO:0008982|GO:0009401|GO:0016021 KEGG: 00051+2.7.1.198 DB29_00831 287362ed73bc89c9b7657e832fc12ae3 333 TIGRFAM TIGR00825 EIIBC-GUT: PTS system, glucitol/sorbitol-specific, IIBC component 6 331 3.6E-143 T 14-10-2018 IPR004702 Phosphotransferease, sorbitol phosphotransferase enzyme II GO:0008982|GO:0009401|GO:0016021 KEGG: 00051+2.7.1.198 DB29_00831 287362ed73bc89c9b7657e832fc12ae3 333 Pfam PF03612 Sorbitol phosphotransferase enzyme II N-terminus 7 184 6.5E-74 T 14-10-2018 IPR011618 Sorbitol phosphotransferase enzyme II, N-terminal GO:0008982|GO:0009401|GO:0016021 KEGG: 00051+2.7.1.198 DB29_02779 3f040886308e380bf9ab420b3eee65a7 341 Gene3D G3DSA:1.10.3470.10 5 341 9.1E-98 T 14-10-2018 IPR037294 ABC transporter, BtuC-like DB29_02779 3f040886308e380bf9ab420b3eee65a7 341 SUPERFAMILY SSF81345 5 335 1.44E-78 T 14-10-2018 IPR037294 ABC transporter, BtuC-like DB29_02779 3f040886308e380bf9ab420b3eee65a7 341 Pfam PF01032 FecCD transport family 18 335 2.1E-89 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 DB29_01404 664f23f84c10b444eef6348485765632 146 Pfam PF07331 Tripartite tricarboxylate transporter TctB family 14 139 4.3E-7 T 14-10-2018 IPR009936 Protein of unknown function DUF1468 DB29_03037 c68c6c76574ce900e4b02486af6a9454 187 PIRSF PIRSF019083 1 172 3.4E-59 T 14-10-2018 IPR016747 Phosphotransbutyrylase DB29_03037 c68c6c76574ce900e4b02486af6a9454 187 Pfam PF04892 VanZ like family 11 155 6.2E-15 T 14-10-2018 IPR006976 VanZ-like DB29_02823 2949a400b65a00f691b48cbb5442c6b3 512 Gene3D G3DSA:1.10.10.10 1 147 1.3E-14 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_02823 2949a400b65a00f691b48cbb5442c6b3 512 Pfam PF05043 Mga helix-turn-helix domain 76 160 1.3E-19 T 14-10-2018 IPR007737 Mga helix-turn-helix domain DB29_01363 7f239d072b3808c8367de31d9cfb8ebc 455 Pfam PF02447 GntP family permease 9 453 3.7E-131 T 14-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 DB29_01363 7f239d072b3808c8367de31d9cfb8ebc 455 PIRSF PIRSF002746 3 455 4.3E-142 T 14-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 DB29_01363 7f239d072b3808c8367de31d9cfb8ebc 455 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 9 455 6.5E-100 T 14-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 DB29_02364 79939f29e27b6b84b7c6c383b53d2c5d 366 Pfam PF03845 Spore germination protein 10 322 1.1E-77 T 14-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 DB29_02364 79939f29e27b6b84b7c6c383b53d2c5d 366 TIGRFAM TIGR00912 2A0309: spore germination protein (amino acid permease) 16 362 1.3E-49 T 14-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 DB29_03533 5ecbe2f4334c71c2b01c1bf12ad6308c 131 Pfam PF04186 FxsA cytoplasmic membrane protein 8 112 7.7E-31 T 14-10-2018 IPR007313 FxsA cytoplasmic membrane protein GO:0016020 DB29_02638 27f5d0ed92d080d6dfbe7cb75ddf810c 309 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 102 304 1.3E-14 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DB29_02638 27f5d0ed92d080d6dfbe7cb75ddf810c 309 SUPERFAMILY SSF161098 71 296 1.7E-62 T 14-10-2018 IPR035906 MetI-like superfamily DB29_02638 27f5d0ed92d080d6dfbe7cb75ddf810c 309 Gene3D G3DSA:1.10.3720.10 65 306 9.1E-75 T 14-10-2018 IPR035906 MetI-like superfamily DB29_02990 26ddea47d326d288704f29e6f43f15c4 125 Gene3D G3DSA:3.40.30.10 1 74 5.0E-5 T 14-10-2018 DB29_02990 26ddea47d326d288704f29e6f43f15c4 125 SUPERFAMILY SSF52833 5 49 6.69E-5 T 14-10-2018 IPR036249 Thioredoxin-like superfamily DB29_02990 26ddea47d326d288704f29e6f43f15c4 125 Pfam PF04134 Protein of unknown function, DUF393 6 116 3.0E-24 T 14-10-2018 IPR007263 Protein of unknown function DUF393 DB29_01557 4c3edcc8f5f3e167253a36c79a202d6e 162 Pfam PF14285 Domain of unknown function (DUF4367) 55 162 4.6E-5 T 14-10-2018 IPR025377 Domain of unknown function DUF4367 DB29_02586 cd6df4f9a7ccf004792b4776bdc865e4 92 Gene3D G3DSA:1.25.40.10 4 90 1.7E-9 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DB29_00291 9b0c7247a5814ed5361271203ff37e5c 223 SUPERFAMILY SSF141322 149 209 6.28E-8 T 14-10-2018 DB29_00291 9b0c7247a5814ed5361271203ff37e5c 223 Gene3D G3DSA:2.40.50.140 149 223 1.8E-12 T 14-10-2018 DB29_00291 9b0c7247a5814ed5361271203ff37e5c 223 Pfam PF01957 NfeD-like C-terminal, partner-binding 63 208 1.5E-12 T 14-10-2018 IPR002810 NfeD-like, C-terminal domain DB29_02617 4bb5c1cf945a2cb343c9a7989abef72d 144 Pfam PF07331 Tripartite tricarboxylate transporter TctB family 13 144 3.0E-12 T 14-10-2018 IPR009936 Protein of unknown function DUF1468 DB29_03269 0e841b3717b37e50616059cba7de9b00 118 Pfam PF09685 Domain of unknown function (DUF4870) 17 117 7.5E-32 T 14-10-2018 IPR019109 Protein of unknown function DUF4870 DB29_00600 b3976e08de307c33410169ed9a4422ce 421 Pfam PF12698 ABC-2 family transporter protein 19 411 2.4E-37 T 14-10-2018 DB29_04102 5900fbda0bb5210d6cda6dad9842be52 52 Gene3D G3DSA:3.40.630.30 1 52 3.8E-5 T 14-10-2018 DB29_04244 cf409f17e2eaef245a72453dbb94f8e9 77 Pfam PF10779 Haemolysin XhlA 6 67 4.3E-13 T 14-10-2018 IPR019715 Haemolysin XhlA DB29_02703 a446a16b5cb45567c7c56b74a8952a22 282 Pfam PF14267 Domain of unknown function (DUF4357) 236 278 2.3E-11 T 14-10-2018 IPR025579 Domain of unknown function DUF4357 DB29_01804 96a82ab90f1572da3bb490d11e7c3cb7 201 Pfam PF13346 ABC-2 family transporter protein 3 197 2.6E-36 T 14-10-2018 IPR025699 ABC-2 membrane transporter-like DB29_00763 088142709da096e4d45c2d8dc21502e6 322 Gene3D G3DSA:1.20.1530.20 1 307 8.6E-106 T 14-10-2018 IPR038770 Sodium/solute symporter superfamily DB29_00763 088142709da096e4d45c2d8dc21502e6 322 Pfam PF01758 Sodium Bile acid symporter family 41 218 1.4E-41 T 14-10-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 DB29_01275 0b6a2ac1ab06190e4cfefc6846077bb2 342 Pfam PF00487 Fatty acid desaturase 52 295 2.6E-35 T 14-10-2018 IPR005804 Fatty acid desaturase domain GO:0006629 DB29_03449 5bfb7ec7df02975480b1b0fe4b3658d8 386 Pfam PF01098 Cell cycle protein 12 375 1.8E-95 T 14-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DB29_03449 5bfb7ec7df02975480b1b0fe4b3658d8 386 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 9 374 4.2E-110 T 14-10-2018 IPR011923 Probable peptidoglycan glycosyltransferase RodA/MrdB GO:0008360|GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DB29_03449 5bfb7ec7df02975480b1b0fe4b3658d8 386 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 332 356 - T 14-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DB29_01537 3c9bb094a24e6ca70e4857a5c37bd983 117 SUPERFAMILY SSF55331 1 103 3.78E-7 T 14-10-2018 IPR014347 Tautomerase/MIF superfamily DB29_04090 197c95fd797153e41090a30aedb364f5 190 Pfam PF10628 Outer spore coat protein E (CotE) 9 186 1.0E-69 T 14-10-2018 IPR018901 Spore coat protein CotE DB29_00620 5280c37056252de223e3fe000a1373fe 47 Pfam PF01963 TraB family 1 45 2.0E-6 T 14-10-2018 IPR002816 Pheromone shutdown, TraB DB29_00323 de4d13fd9e00b538aff2dab9680fa8ec 47 Pfam PF14006 YqzL-like protein 4 37 3.1E-15 T 14-10-2018 IPR025617 YqzL-like protein DB29_03350 b3c1dffcacf5131a87272b4814e08b1f 571 Pfam PF03553 Na+/H+ antiporter family 207 534 1.6E-70 T 14-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 DB29_04153 f12b75f44d85da7794f965ef3322ab39 104 Pfam PF03626 Prokaryotic Cytochrome C oxidase subunit IV 19 92 4.1E-11 T 14-10-2018 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 DB29_04153 f12b75f44d85da7794f965ef3322ab39 104 TIGRFAM TIGR02901 QoxD: cytochrome aa3 quinol oxidase, subunit IV 11 102 1.8E-30 T 14-10-2018 IPR014250 Quinol oxidase subunit IV GO:0016021|GO:0016682|GO:0042773 DB29_00808 608a231aeb47bd56db6728d6b3da460d 213 Pfam PF07875 Coat F domain 122 184 3.6E-20 T 14-10-2018 IPR012851 Spore coat protein CotF-like DB29_04193 fe31a2c2a8b476e874cad54ff1f9bfda 340 Pfam PF03606 C4-dicarboxylate anaerobic carrier 7 140 7.5E-6 T 14-10-2018 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 DB29_00460 68f68ef5c5b1b7d26241f267e29cd9a1 87 Pfam PF02699 Preprotein translocase subunit 6 81 1.0E-28 T 14-10-2018 IPR003849 Preprotein translocase YajC DB29_00460 68f68ef5c5b1b7d26241f267e29cd9a1 87 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 3 84 1.5E-31 T 14-10-2018 IPR003849 Preprotein translocase YajC DB29_00460 68f68ef5c5b1b7d26241f267e29cd9a1 87 PRINTS PR01853 Bacterial YajC preprotein translocase signature 42 60 1.5E-15 T 14-10-2018 IPR003849 Preprotein translocase YajC DB29_00460 68f68ef5c5b1b7d26241f267e29cd9a1 87 PRINTS PR01853 Bacterial YajC preprotein translocase signature 4 24 1.5E-15 T 14-10-2018 IPR003849 Preprotein translocase YajC DB29_00460 68f68ef5c5b1b7d26241f267e29cd9a1 87 SMART SM01323 2 84 3.5E-41 T 14-10-2018 IPR003849 Preprotein translocase YajC DB29_02112 750d6e9d00b1055fec7e1153fce93330 267 Pfam PF01925 Sulfite exporter TauE/SafE 10 264 1.9E-42 T 14-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 DB29_04226 2875c64c2264169d85cf78f6cbdb9774 203 Pfam PF14265 Domain of unknown function (DUF4355) 45 162 3.2E-21 T 14-10-2018 IPR025580 Protein of unknown function DUF4355 DB29_02828 b491eb56545ca12136019c0ffc58e6cf 410 Pfam PF04235 Protein of unknown function (DUF418) 239 402 2.7E-52 T 14-10-2018 IPR007349 Domain of unknown function DUF418 DB29_04235 9302118a46459ad1cf3361e284adc4a1 154 Pfam PF12363 Phage tail assembly chaperone protein, TAC 5 113 1.9E-21 T 14-10-2018 IPR024410 Phage tail assembly chaperone protein, TAC DB29_03871 c8265322d2adc0c4efe17c36a0158e59 161 ProDom PD699877 YLAF TRANSMEMBRANE MEMBRANE BH2633 100 153 1.0E-21 T 14-10-2018 IPR035211 Protein of unknown function DUF5325 DB29_03871 c8265322d2adc0c4efe17c36a0158e59 161 Pfam PF17259 Family of unknown function (DUF5325) 101 153 2.0E-14 T 14-10-2018 IPR035211 Protein of unknown function DUF5325 DB29_03339 37bdb5f7028ca3ecdc2f2bf46297f870 510 Pfam PF04740 LXG domain of WXG superfamily 4 205 1.4E-49 T 14-10-2018 IPR006829 LXG domain DB29_00525 de42448a51496fb5d3d875b038e51bf2 463 Pfam PF04293 SpoVR like protein 4 401 4.3E-161 T 14-10-2018 IPR007390 Sporulation stage V, protein R DB29_01213 8c6d7e3424b9f4ab5f482a6557a2e03b 171 Pfam PF01899 Na+/H+ ion antiporter subunit 20 169 8.5E-37 T 14-10-2018 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 DB29_01213 8c6d7e3424b9f4ab5f482a6557a2e03b 171 PIRSF PIRSF019239 10 171 1.3E-36 T 14-10-2018 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 DB29_01054 93184cc0d0786149399d70311ec7fc43 467 Pfam PF03553 Na+/H+ antiporter family 16 215 2.7E-14 T 14-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 DB29_00917 e0f308a9fa1445a89ef847b777200df7 394 Pfam PF01032 FecCD transport family 79 388 4.9E-88 T 14-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 DB29_00917 e0f308a9fa1445a89ef847b777200df7 394 SUPERFAMILY SSF81345 66 388 3.01E-80 T 14-10-2018 IPR037294 ABC transporter, BtuC-like DB29_00917 e0f308a9fa1445a89ef847b777200df7 394 Gene3D G3DSA:1.10.3470.10 66 392 6.5E-90 T 14-10-2018 IPR037294 ABC transporter, BtuC-like DB29_00423 b0e39bea55d31979bbbbef224c5b8ec9 90 Hamap MF_01507 UPF0297 protein . 1 85 27.6 T 14-10-2018 IPR009309 Uncharacterised protein family UPF0297 DB29_00423 b0e39bea55d31979bbbbef224c5b8ec9 90 PIRSF PIRSF037258 1 88 8.6E-44 T 14-10-2018 IPR009309 Uncharacterised protein family UPF0297 DB29_00423 b0e39bea55d31979bbbbef224c5b8ec9 90 Pfam PF06135 Bacterial protein of unknown function (DUF965) 5 82 5.2E-37 T 14-10-2018 IPR009309 Uncharacterised protein family UPF0297 DB29_01353 171d37f56d553f48fcaefc849b5c332f 351 Pfam PF01757 Acyltransferase family 6 316 2.4E-25 T 14-10-2018 IPR002656 Acyltransferase 3 GO:0016747 DB29_03287 a7f28059346dc93f5fe9aa8cafca7567 157 Pfam PF07331 Tripartite tricarboxylate transporter TctB family 7 152 8.8E-24 T 14-10-2018 IPR009936 Protein of unknown function DUF1468 DB29_03212 478a658fd29003b2ea9d223079f71368 234 Gene3D G3DSA:3.40.50.2020 77 234 4.3E-16 T 14-10-2018 DB29_03212 478a658fd29003b2ea9d223079f71368 234 SUPERFAMILY SSF53271 68 231 3.41E-21 T 14-10-2018 IPR029057 Phosphoribosyltransferase-like DB29_03212 478a658fd29003b2ea9d223079f71368 234 Pfam PF00156 Phosphoribosyl transferase domain 165 231 1.2E-10 T 14-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 DB29_00563 0450e443e68df745e66c9e99d16b77f9 229 Pfam PF12671 Putative amidase domain 69 222 2.9E-38 T 14-10-2018 IPR024301 Putative amidase domain DB29_01582 55dcfff063de3bf2c6f8643785dd8bea 182 Gene3D G3DSA:1.25.40.10 27 179 2.5E-14 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DB29_01582 55dcfff063de3bf2c6f8643785dd8bea 182 SUPERFAMILY SSF81901 28 174 4.71E-10 T 14-10-2018 DB29_00492 9b12e60e2791afb4259a57816b8f9768 118 Pfam PF12732 YtxH-like protein 8 91 4.7E-10 T 14-10-2018 IPR024623 Uncharacterised protein family YtxH DB29_01220 ee014097ae797b7a3d9d7e919cb57b47 113 SUPERFAMILY SSF46785 3 102 5.66E-33 T 14-10-2018 IPR036390 Winged helix DNA-binding domain superfamily DB29_01220 ee014097ae797b7a3d9d7e919cb57b47 113 Gene3D G3DSA:1.10.10.10 1 112 3.5E-39 T 14-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily DB29_01220 ee014097ae797b7a3d9d7e919cb57b47 113 Pfam PF01638 HxlR-like helix-turn-helix 13 101 1.5E-35 T 14-10-2018 IPR002577 Helix-turn-helix, HxlR type DB29_02625 f1ae191d0cb258815eb4302345896fb2 308 Gene3D G3DSA:3.30.70.1900 162 297 5.4E-11 T 14-10-2018 DB29_02625 f1ae191d0cb258815eb4302345896fb2 308 Pfam PF10040 CRISPR-associated endoribonuclease Cas6 174 294 2.9E-12 T 14-10-2018 IPR019267 CRISPR-associated protein Cas6, C-terminal DB29_01464 48964ac38c5f78b5aeacee79ed357660 321 SUPERFAMILY SSF161098 90 297 1.7E-21 T 14-10-2018 IPR035906 MetI-like superfamily DB29_01464 48964ac38c5f78b5aeacee79ed357660 321 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 311 1.1E-42 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DB29_01464 48964ac38c5f78b5aeacee79ed357660 321 Gene3D G3DSA:1.10.3720.10 84 308 3.0E-27 T 14-10-2018 IPR035906 MetI-like superfamily DB29_02524 3ae917353ea9261fe3af5b2914279f45 356 Pfam PF01757 Acyltransferase family 8 327 4.5E-22 T 14-10-2018 IPR002656 Acyltransferase 3 GO:0016747 DB29_03676 d80488bccaadce71a5bcd9d302d1d420 98 Gene3D G3DSA:4.10.810.10 27 81 1.5E-14 T 14-10-2018 IPR027393 Virus scaffolding protein, C-terminal GO:0005515 DB29_03676 d80488bccaadce71a5bcd9d302d1d420 98 Pfam PF08858 IDEAL domain 37 73 3.5E-15 T 14-10-2018 IPR014957 IDEAL domain DB29_03676 d80488bccaadce71a5bcd9d302d1d420 98 SMART SM00914 37 73 4.0E-14 T 14-10-2018 IPR014957 IDEAL domain DB29_00274 b86f16bdb6d6bdb041ffce877283caa6 484 Pfam PF03323 Bacillus/Clostridium GerA spore germination protein 25 475 1.4E-152 T 14-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 DB29_00274 b86f16bdb6d6bdb041ffce877283caa6 484 PIRSF PIRSF005690 4 484 5.7E-128 T 14-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 DB29_00839 0e9a896ef913556e901f483db8e5df23 235 Pfam PF04854 Protein of unknown function, DUF624 20 97 1.6E-24 T 14-10-2018 IPR006938 Protein of unknown function DUF624 DB29_04133 9b5b138b1af252ee0451065ebe35758b 540 Pfam PF05425 Copper resistance protein D 178 274 1.5E-10 T 14-10-2018 IPR008457 Copper resistance protein D GO:0016021 DB29_03615 c50673456e0d611cd0624a05d6f7bba2 352 SUPERFAMILY SSF48452 16 118 1.98E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DB29_03615 c50673456e0d611cd0624a05d6f7bba2 352 Gene3D G3DSA:1.25.40.10 22 213 6.4E-7 T 14-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 DB29_03615 c50673456e0d611cd0624a05d6f7bba2 352 SUPERFAMILY SSF116965 71 298 1.29E-7 T 14-10-2018 DB29_03510 5a3b43b241bacd3afad7e29e1e4366d2 311 SUPERFAMILY SSF109604 139 247 6.75E-5 T 14-10-2018 DB29_02174 347ef5df8d08b098aa389b2e8eaad78c 329 SUPERFAMILY SSF50969 53 323 1.45E-27 T 14-10-2018 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like DB29_02174 347ef5df8d08b098aa389b2e8eaad78c 329 Gene3D G3DSA:2.130.10.10 117 327 6.2E-29 T 14-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 DB29_03763 ba0a88640cff459a987b05e6896fbb82 148 Pfam PF15980 Putative Competence protein ComGF 49 130 1.4E-8 T 14-10-2018 IPR016977 Competence operon G, ComGF DB29_01587 2714769e65c8e61b8666965e9de3c189 146 Pfam PF17200 Single Cache domain 2 18 131 7.6E-15 T 14-10-2018 IPR033480 Single Cache domain 2 DB29_02562 4fa95498699aea7981ca5fc931d4b800 455 Pfam PF00939 Sodium:sulfate symporter transmembrane region 23 454 1.0E-55 T 14-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 DB29_03578 6b5dcec7161309ef5529e29d99ab3df2 136 Pfam PF03994 Domain of Unknown Function (DUF350) 80 134 4.9E-15 T 14-10-2018 IPR007140 Protein of unknown function DUF350 DB29_03578 6b5dcec7161309ef5529e29d99ab3df2 136 Pfam PF03994 Domain of Unknown Function (DUF350) 18 68 2.2E-14 T 14-10-2018 IPR007140 Protein of unknown function DUF350 DB29_01061 0d3ef93221a9cf3a91b9396e13a01265 391 Pfam PF01882 Protein of unknown function DUF58 198 278 1.1E-16 T 14-10-2018 IPR002881 Domain of unknown function DUF58 DB29_00584 f10edd224a227fbc51d844ee1aa4be5e 541 Pfam PF02554 Carbon starvation protein CstA 1 350 9.8E-127 T 14-10-2018 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 DB29_00584 f10edd224a227fbc51d844ee1aa4be5e 541 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 376 489 1.4E-32 T 14-10-2018 IPR025299 CstA, C-terminal domain DB29_00783 284025a926834869c9c220cd6b7bc032 207 Pfam PF01810 LysE type translocator 15 197 1.5E-19 T 14-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 DB29_03696 36334bea70a972c65eabc5c192496c62 294 Pfam PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) 28 277 1.5E-58 T 14-10-2018 IPR019108 Cytochrome c oxidase caa3-type, assembly factor CtaG-related DB29_03696 36334bea70a972c65eabc5c192496c62 294 TIGRFAM TIGR02737 caa3_CtaG: cytochrome c oxidase assembly factor CtaG 5 279 3.3E-99 T 14-10-2018 IPR014108 Cytochrome c oxidase caa3 type assembly factor CtaG DB29_02040 ff3d155a5deb4932a85b305fe3143ec2 69 Gene3D G3DSA:3.40.50.10860 1 25 1.0E-5 T 14-10-2018 DB29_02040 ff3d155a5deb4932a85b305fe3143ec2 69 SUPERFAMILY SSF53223 1 48 9.32E-9 T 14-10-2018 DB29_01606 74a382e1b07bb01f23f55f3786cf04ba 160 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 20 148 7.8E-32 T 14-10-2018 IPR007387 TRAP transporter, small membrane protein DctQ DB29_03102 453c1b4d2f0fc36c0664e7b577ae3621 513 Pfam PF03806 AbgT putative transporter family 13 508 9.9E-189 T 14-10-2018 IPR004697 p-Aminobenzoyl-glutamate transport protein AbgT GO:0015558|GO:1902604 DB29_03575 ed761026c8bfed0f97c7df9ad74f0de7 179 Pfam PF02674 Colicin V production protein 3 164 2.1E-36 T 14-10-2018 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 DB29_03184 228b307ba4a1a97296f02573d81c61bb 208 Gene3D G3DSA:3.90.79.10 2 207 5.5E-58 T 14-10-2018 DB29_02293 2dd7ccb76b5b9a3d2a886d0f284180ae 377 TIGRFAM TIGR04383 acidic_w_LPXTA: processed acidic surface protein 2 370 2.8E-66 T 14-10-2018 IPR030832 Processed acidic surface protein DB29_02770 8bd62640660aeac8753dc384093d53bd 373 TIGRFAM TIGR02887 spore_ger_x_C: germination protein, Ger(x)C family 2 372 6.2E-73 T 14-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 DB29_02770 8bd62640660aeac8753dc384093d53bd 373 Gene3D G3DSA:3.30.300.210 219 373 7.1E-18 T 14-10-2018 IPR038501 Spore germination GerAC superfamily DB29_02770 8bd62640660aeac8753dc384093d53bd 373 Pfam PF05504 Spore germination B3/ GerAC like, C-terminal 203 370 7.9E-29 T 14-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 DB29_02473 50cda1cb114a6a173e6343048b3894f7 483 Pfam PF03606 C4-dicarboxylate anaerobic carrier 26 477 7.5E-115 T 14-10-2018 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 DB29_00504 a5ce3d70745c137261677d30db3fb3d0 59 Pfam PF14120 YhzD-like protein 1 59 1.3E-24 T 14-10-2018 IPR025544 YhzD-like protein DB29_03883 9a30f03ad7b362be0b0e38c971fc67a4 181 Pfam PF04238 Protein of unknown function (DUF420) 49 177 4.0E-41 T 14-10-2018 IPR007352 Protein of unknown function DUF420 DB29_03095 6ada1a5ea40a0cebebf9860a32e80658 382 PRINTS PR00164 ABC-2 type transport system membrane protein signature 324 343 2.2E-5 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 DB29_03095 6ada1a5ea40a0cebebf9860a32e80658 382 PRINTS PR00164 ABC-2 type transport system membrane protein signature 267 291 2.2E-5 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 DB29_03095 6ada1a5ea40a0cebebf9860a32e80658 382 PRINTS PR00164 ABC-2 type transport system membrane protein signature 304 323 2.2E-5 T 14-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 DB29_03095 6ada1a5ea40a0cebebf9860a32e80658 382 Pfam PF12698 ABC-2 family transporter protein 30 374 1.7E-41 T 14-10-2018 DB29_04279 6652467c70fbff3773278c50f80849fb 248 SUPERFAMILY SSF88713 1 248 1.11E-71 T 14-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 DB29_04279 6652467c70fbff3773278c50f80849fb 248 Hamap MF_01246 Chitooligosaccharide deacetylase [chbG]. 2 245 36.063 T 14-10-2018 IPR022948 Chitooligosaccharide deacetylase ChbG-like, bacteria GO:0000272|GO:0016811 DB29_04279 6652467c70fbff3773278c50f80849fb 248 Pfam PF04794 YdjC-like protein 3 232 1.6E-58 T 14-10-2018 IPR006879 Carbohydrate deacetylase YdjC-like DB29_04279 6652467c70fbff3773278c50f80849fb 248 Gene3D G3DSA:3.20.20.370 1 248 1.2E-76 T 14-10-2018 DB29_00227 21c96ea412610d6a2af70a3b80d98388 65 Pfam PF04892 VanZ like family 2 44 1.9E-13 T 14-10-2018 IPR006976 VanZ-like DB29_02152 996b621c8eb6e7edf8a7232cb4243172 280 SUPERFAMILY SSF161098 6 280 5.36E-68 T 14-10-2018 IPR035906 MetI-like superfamily DB29_02152 996b621c8eb6e7edf8a7232cb4243172 280 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 98 269 1.7E-17 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DB29_02152 996b621c8eb6e7edf8a7232cb4243172 280 Gene3D G3DSA:1.10.3720.10 1 267 3.1E-65 T 14-10-2018 IPR035906 MetI-like superfamily DB29_04131 9596cd1e90bb4b15940821a398129dd1 42 Pfam PF13040 Fur-regulated basic protein B 2 40 4.4E-16 T 14-10-2018 IPR025004 Transcriptional regulatory protein SenN/SenS DB29_02987 f1064511912c01bb3649363d65e33060 181 SMART SM01207 8 174 7.4E-31 T 14-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 DB29_02987 f1064511912c01bb3649363d65e33060 181 Pfam PF02660 Glycerol-3-phosphate acyltransferase 9 179 8.3E-32 T 14-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 DB29_00674 f4a1b795de71a7680295054dfab2fc1f 326 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 1 176 2.9E-28 T 14-10-2018 IPR007404 LexA-binding, inner membrane-associated putative hydrolase DB29_02252 09028fa2c409e5f00661049d3ec791f5 157 Pfam PF13273 Protein of unknown function (DUF4064) 3 120 6.9E-23 T 14-10-2018 IPR025273 Domain of unknown function DUF4064 DB29_00019 6e65056e7ff24ed343946f6dfc7dd910 38 Pfam PF16951 Putative methionine and alanine importer, small subunit 1 24 6.0E-8 T 14-10-2018 IPR031596 Putative methionine and alanine importer, small subunit DB29_00995 040e90956f3a8a77c3c36c4f0622684c 196 Pfam PF02417 Chromate transporter 11 177 5.0E-34 T 14-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 DB29_02279 0d88420c79a8cb557e37a07743ffabec 418 Pfam PF12698 ABC-2 family transporter protein 19 388 3.6E-44 T 14-10-2018 DB29_02996 ecd4b55e33f02df489c398d870aa1c48 308 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 97 301 1.5E-19 T 14-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 DB29_02996 ecd4b55e33f02df489c398d870aa1c48 308 Gene3D G3DSA:1.10.3720.10 62 304 4.7E-75 T 14-10-2018 IPR035906 MetI-like superfamily DB29_02996 ecd4b55e33f02df489c398d870aa1c48 308 SUPERFAMILY SSF160964 23 58 1.44E-7 T 14-10-2018 DB29_02996 ecd4b55e33f02df489c398d870aa1c48 308 SUPERFAMILY SSF161098 66 293 1.2E-63 T 14-10-2018 IPR035906 MetI-like superfamily DB29_02274 6b8479ff8a955122ef5cde525d72078b 143 Pfam PF07486 Cell Wall Hydrolase 24 129 1.1E-15 T 14-10-2018 IPR011105 Cell wall hydrolase, SleB GO:0016787 DB29_02274 6b8479ff8a955122ef5cde525d72078b 143 Gene3D G3DSA:1.10.10.2520 8 92 1.9E-10 T 14-10-2018 DB29_04165 854c91d9ff07a0ce3b1fe83bcbaedc77 228 Pfam PF12698 ABC-2 family transporter protein 47 222 1.2E-19 T 14-10-2018 DB29_01919 085e85187e322b5c98bca411108bb5ec 170 Pfam PF05991 YacP-like NYN domain 5 167 3.4E-52 T 14-10-2018 IPR010298 Protein of unknown function DUF901 DB29_02958 364b2ec05ab9311d96bdc5a3f0180728 110 SUPERFAMILY SSF54197 7 103 5.1E-19 T 14-10-2018 IPR036265 HIT-like superfamily DB29_02958 364b2ec05ab9311d96bdc5a3f0180728 110 Gene3D G3DSA:3.30.428.10 1 109 8.1E-20 T 14-10-2018 IPR036265 HIT-like superfamily DB29_02958 364b2ec05ab9311d96bdc5a3f0180728 110 Pfam PF01230 HIT domain 19 103 9.7E-13 T 14-10-2018 IPR001310 Histidine triad (HIT) protein DB29_01349 5e6e3bd236f15723238d63dc6c51a984 431 Pfam PF10797 Protein of unknown function 4 427 5.5E-175 T 14-10-2018 IPR019733 Uncharacterised protein family YhfT DB29_03800 81d590fa2da56848e95aea3bd598654f 136 Pfam PF03780 Asp23 family, cell envelope-related function 17 120 2.5E-34 T 14-10-2018 IPR005531 Alkaline shock protein Asp23 DB29_04354 036cc55dc4ff6c3360db962f16f3bb9e 133 Pfam PF00075 RNase H 3 124 1.1E-16 T 14-10-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 DB29_04354 036cc55dc4ff6c3360db962f16f3bb9e 133 Gene3D G3DSA:3.30.420.10 1 130 4.6E-28 T 14-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 DB29_04354 036cc55dc4ff6c3360db962f16f3bb9e 133 SUPERFAMILY SSF53098 1 126 1.39E-29 T 14-10-2018 IPR012337 Ribonuclease H-like superfamily DB29_01141 06904f494e95fd158362555288f7da85 236 Pfam PF02308 MgtC family 8 138 4.8E-33 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 DB29_01141 06904f494e95fd158362555288f7da85 236 PRINTS PR01837 MgtC/SapB protein signature 94 118 2.2E-41 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 DB29_01141 06904f494e95fd158362555288f7da85 236 PRINTS PR01837 MgtC/SapB protein signature 66 88 2.2E-41 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 DB29_01141 06904f494e95fd158362555288f7da85 236 PRINTS PR01837 MgtC/SapB protein signature 30 48 2.2E-41 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 DB29_01141 06904f494e95fd158362555288f7da85 236 PRINTS PR01837 MgtC/SapB protein signature 11 30 2.2E-41 T 14-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 DB29_01204 1f96047a40c9fe8447ea69546fcc0d29 210 Pfam PF04854 Protein of unknown function, DUF624 20 95 2.8E-28 T 14-10-2018 IPR006938 Protein of unknown function DUF624 DB29_01777 371e0aacf21b827a8c95999c91873e81 173 SUPERFAMILY SSF52540 2 141 8.79E-19 T 14-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase DB29_01777 371e0aacf21b827a8c95999c91873e81 173 Gene3D G3DSA:3.40.50.300 1 170 3.6E-19 T 14-10-2018 DB29_03753 8d5fb5a9b2ba1c30ecbd94192c55a053 127 Pfam PF07552 Spore Coat Protein X and V domain 69 126 9.1E-21 T 14-10-2018 IPR011428 Spore coat protein X/V GO:0030435|GO:0031160 DB29_03753 8d5fb5a9b2ba1c30ecbd94192c55a053 127 Pfam PF07552 Spore Coat Protein X and V domain 6 61 1.6E-21 T 14-10-2018 IPR011428 Spore coat protein X/V GO:0030435|GO:0031160 DB29_04040 6510127ccc9f92fab42419e194818b43 265 Pfam PF01148 Cytidylyltransferase family 2 262 4.1E-70 T 14-10-2018 DB29_04040 6510127ccc9f92fab42419e194818b43 265 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 224 250 - T 14-10-2018 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7817 DB29_02079 c88cccf9702120188fbf2c4232c46954 300 Pfam PF09991 Predicted membrane protein (DUF2232) 8 290 3.7E-59 T 14-10-2018 IPR018710 Protein of unknown function DUF2232 DB29_01861 41e1f936ab0384e613b294803b634810 145 Pfam PF10730 Protein of unknown function (DUF2521) 1 145 1.5E-60 T 14-10-2018 IPR019667 Uncharacterised protein family YbaK DB29_02443 c30a6fc6a2a6cda188e45ba52ecf42a1 449 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 15 434 6.8E-48 T 14-10-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit DB29_03984 e6a419cd2b10d0356e7cf76ce7ccf054 140 Pfam PF11068 YlqD protein 2 130 1.1E-34 T 14-10-2018 IPR021297 YlqD protein DB29_01330 7d762e3a3fd4286c07aa924f62813be5 151 Pfam PF17355 Family of unknown function (DUF5383) 31 148 5.2E-35 T 14-10-2018 IPR020212 ESX secretion system protein YueC DB29_01954 ac8488408a2be502b50da7c7fb90eb24 127 Pfam PF04977 Septum formation initiator 50 121 7.2E-14 T 14-10-2018 IPR007060 Septum formation initiator FtsL/DivIC DB29_00374 0032ca3f5cff81b38efa4643966dacd4 144 Pfam PF04039 Domain related to MnhB subunit of Na+/H+ antiporter 12 133 6.0E-31 T 14-10-2018 IPR007182 Na+/H+ antiporter MnhB subunit-related protein DB29_00789 faae0b89ed83b9f9989d86b482e024fe 56 SUPERFAMILY SSF160424 1 54 4.45E-15 T 14-10-2018 IPR036170 Probable antitoxin YezG superfamily DB29_00789 faae0b89ed83b9f9989d86b482e024fe 56 Pfam PF04634 Protein of unknown function, DUF600 1 49 3.0E-13 T 14-10-2018 IPR006728 Protein of unknown function DUF600 DB29_02287 a7ffb569842163ece1a455cd4e40d960 415 Gene3D G3DSA:1.10.3860.10 1 404 1.9E-137 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 DB29_02287 a7ffb569842163ece1a455cd4e40d960 415 Pfam PF00375 Sodium:dicarboxylate symporter family 4 399 3.0E-132 T 14-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 DB29_02287 a7ffb569842163ece1a455cd4e40d960 415 SUPERFAMILY SSF118215 4 399 2.75E-120 T 14-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 DB29_02287 a7ffb569842163ece1a455cd4e40d960 415 PRINTS PR00173 Glutamate-aspartate symporter signature 327 346 1.3E-53 T 14-10-2018 DB29_02287 a7ffb569842163ece1a455cd4e40d960 415 PRINTS PR00173 Glutamate-aspartate symporter signature 78 103 1.3E-53 T 14-10-2018 DB29_02287 a7ffb569842163ece1a455cd4e40d960 415 PRINTS PR00173 Glutamate-aspartate symporter signature 48 68 1.3E-53 T 14-10-2018 DB29_02287 a7ffb569842163ece1a455cd4e40d960 415 PRINTS PR00173 Glutamate-aspartate symporter signature 190 209 1.3E-53 T 14-10-2018 DB29_02287 a7ffb569842163ece1a455cd4e40d960 415 PRINTS PR00173 Glutamate-aspartate symporter signature 354 374 1.3E-53 T 14-10-2018 DB29_02287 a7ffb569842163ece1a455cd4e40d960 415 PRINTS PR00173 Glutamate-aspartate symporter signature 2 22 1.3E-53 T 14-10-2018 DB29_02287 a7ffb569842163ece1a455cd4e40d960 415 PRINTS PR00173 Glutamate-aspartate symporter signature 292 318 1.3E-53 T 14-10-2018 DB29_00104 0ed7ceb6fc45e533b1063cb5e4131a32 239 ProDom PD119161 YPHF BH1644 PROTEINS PRECURSOR ORF1 RBL05088 SIGNAL SIMILAR 17 225 3.0E-119 T 14-10-2018 DB29_02961 226bcdbb950d3873cdc4e5dd6508469e 268 Gene3D G3DSA:3.40.630.30 22 264 9.1E-19 T 14-10-2018 DB29_02961 226bcdbb950d3873cdc4e5dd6508469e 268 SUPERFAMILY SSF55729 130 259 1.68E-13 T 14-10-2018 IPR016181 Acyl-CoA N-acyltransferase DB29_03543 2ea1cb72eae7149694c2a73179859372 207 Pfam PF02659 Putative manganese efflux pump 119 204 6.4E-9 T 14-10-2018 IPR003810 Putative manganese efflux pump DB29_03543 2ea1cb72eae7149694c2a73179859372 207 Pfam PF02659 Putative manganese efflux pump 3 78 4.1E-9 T 14-10-2018 IPR003810 Putative manganese efflux pump DB29_03543 2ea1cb72eae7149694c2a73179859372 207 TIGRFAM TIGR02840 spore_YtaF: putative sporulation protein YtaF 3 207 1.1E-82 T 14-10-2018 IPR014205 Sporulation protein YtaF DB29_02258 dfb85b484470687c18e8580f96fad6ea 253 Pfam PF03591 AzlC protein 38 178 5.1E-39 T 14-10-2018 IPR011606 Branched-chain amino acid transport, permease DB29_01028 5053a197de9a33b3f720b5f2db3e7864 433 Pfam PF00860 Permease family 16 394 3.1E-45 T 14-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 DB29_01028 5053a197de9a33b3f720b5f2db3e7864 433 PIRSF PIRSF005353 1 433 1.0E-169 T 14-10-2018 IPR026033 Purine permease PbuG-like DB29_03964 3cff3894bf380f6804d60fc48ba4f9c2 120 Pfam PF03780 Asp23 family, cell envelope-related function 9 116 2.1E-35 T 14-10-2018 IPR005531 Alkaline shock protein Asp23 DB29_03897 5b62dfa6ab0a37c6e798ddc327b1dabf 405 TIGRFAM TIGR02871 spore_ylbJ: sporulation integral membrane protein YlbJ 17 360 2.5E-116 T 14-10-2018 IPR014226 Sporulation integral membrane protein YlbJ DB29_03968 cba5a3c6a53820d04dc1003962ae559f 296 TIGRFAM TIGR00718 sda_alpha: L-serine dehydratase, iron-sulfur-dependent, alpha subunit 1 289 1.2E-125 T 14-10-2018 IPR004642 Serine dehydratase, alpha subunit GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 DB29_03968 cba5a3c6a53820d04dc1003962ae559f 296 Pfam PF03313 Serine dehydratase alpha chain 15 275 2.5E-75 T 14-10-2018 IPR005130 Serine dehydratase-like, alpha subunit DB29_01504 18abaaac534df8ba2f74435672c1c275 150 Pfam PF04892 VanZ like family 9 141 2.3E-25 T 14-10-2018 IPR006976 VanZ-like DB29_01504 18abaaac534df8ba2f74435672c1c275 150 PIRSF PIRSF019083 1 150 2.2E-49 T 14-10-2018 IPR016747 Phosphotransbutyrylase DB29_01251 c8d4ed920c01eb38e19315c9e69a0e8e 233 Pfam PF12389 Camelysin metallo-endopeptidase 11 88 3.0E-5 T 14-10-2018 IPR022121 Peptidase M73, camelysin DB29_00576 4c8271b5cb9b05021e5f0883b86397dd 168 PIRSF PIRSF032285 2 168 1.4E-67 T 14-10-2018 IPR011235 MepB-like DB29_00576 4c8271b5cb9b05021e5f0883b86397dd 168 Gene3D G3DSA:3.40.1350.140 4 162 2.6E-57 T 14-10-2018 IPR038231 MepB-like superfamily DB29_00576 4c8271b5cb9b05021e5f0883b86397dd 168 Pfam PF08877 MepB protein 29 151 2.2E-49 T 14-10-2018 IPR011235 MepB-like DB29_01157 b9a5ebe09241a729c2363021426299d2 108 PIRSF PIRSF003203 1 108 5.9E-39 T 14-10-2018 IPR008407 Branched-chain amino acid transport, AzlD DB29_01157 b9a5ebe09241a729c2363021426299d2 108 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 7 103 1.8E-23 T 14-10-2018 IPR008407 Branched-chain amino acid transport, AzlD DB29_04231 bc8f73003f40ac12b5d900eb0dd08604 113 Gene3D G3DSA:2.40.10.270 3 112 6.4E-13 T 14-10-2018 IPR038666 Bacteriophage SPP1, head-tail adaptor superfamily DB29_01171 8e70659c4a46f18c2825227707acd0c2 432 PRINTS PR00758 Arsenical pump membrane protein signature 147 171 1.0E-109 T 14-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 DB29_01171 8e70659c4a46f18c2825227707acd0c2 432 PRINTS PR00758 Arsenical pump membrane protein signature 400 424 1.0E-109 T 14-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 DB29_01171 8e70659c4a46f18c2825227707acd0c2 432 PRINTS PR00758 Arsenical pump membrane protein signature 104 128 1.0E-109 T 14-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 DB29_01171 8e70659c4a46f18c2825227707acd0c2 432 PRINTS PR00758 Arsenical pump membrane protein signature 367 392 1.0E-109 T 14-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 DB29_01171 8e70659c4a46f18c2825227707acd0c2 432 PRINTS PR00758 Arsenical pump membrane protein signature 180 203 1.0E-109 T 14-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 DB29_01171 8e70659c4a46f18c2825227707acd0c2 432 PRINTS PR00758 Arsenical pump membrane protein signature 281 305 1.0E-109 T 14-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 DB29_01171 8e70659c4a46f18c2825227707acd0c2 432 PRINTS PR00758 Arsenical pump membrane protein signature 326 348 1.0E-109 T 14-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 DB29_01171 8e70659c4a46f18c2825227707acd0c2 432 PRINTS PR00758 Arsenical pump membrane protein signature 220 245 1.0E-109 T 14-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 DB29_01171 8e70659c4a46f18c2825227707acd0c2 432 Pfam PF02040 Arsenical pump membrane protein 7 428 3.0E-204 T 14-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 DB29_01171 8e70659c4a46f18c2825227707acd0c2 432 TIGRFAM TIGR00935 2a45: arsenite/antimonite efflux pump membrane protein 6 430 2.0E-221 T 14-10-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 DB29_02327 c47fd8ed06047481bac2f6f19b285a2b 209 TIGRFAM TIGR02837 spore_II_R: stage II sporulation protein R 6 169 1.2E-57 T 14-10-2018 IPR014202 Sporulation stage II, protein R DB29_02327 c47fd8ed06047481bac2f6f19b285a2b 209 Pfam PF09551 Stage II sporulation protein R (spore_II_R) 38 164 5.8E-43 T 14-10-2018 IPR014202 Sporulation stage II, protein R DB29_01450 e64dcf74dd13174017a7637ab625e237 213 Pfam PF01177 Asp/Glu/Hydantoin racemase 30 201 2.4E-9 T 14-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 DB29_01450 e64dcf74dd13174017a7637ab625e237 213 Gene3D G3DSA:3.40.50.1860 98 198 2.7E-74 T 14-10-2018 DB29_01450 e64dcf74dd13174017a7637ab625e237 213 Gene3D G3DSA:3.40.50.1860 2 203 2.7E-74 T 14-10-2018 DB29_03122 ca14f8e5c80925fe84401b99f095d0ec 43 Pfam PF04740 LXG domain of WXG superfamily 1 41 5.7E-10 T 14-10-2018 IPR006829 LXG domain DB29_02181 016eab8cf0165a4d123df5202625923d 260 SUPERFAMILY SSF53335 15 198 1.02E-33 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DB29_02181 016eab8cf0165a4d123df5202625923d 260 Pfam PF08241 Methyltransferase domain 39 133 1.1E-20 T 14-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 DB29_02181 016eab8cf0165a4d123df5202625923d 260 Gene3D G3DSA:3.40.50.150 7 247 3.8E-35 T 14-10-2018 DB29_03888 58d37f95af754584a2ae381f3ec08ced 141 Pfam PF14071 Putative coat protein 12 141 1.3E-44 T 14-10-2018 IPR025953 Putative coat protein YlbD DB29_02758 ddd61ce0b5582308f5b9b1b5fa8c584d 421 Pfam PF03611 PTS system sugar-specific permease component 10 405 1.4E-125 T 14-10-2018 IPR004703 Phosphotransferase system, sugar-specific permease component GO:0009401|GO:0016021 DB29_00972 3d59404c33e408f8958b6af888f28673 152 Pfam PF07331 Tripartite tricarboxylate transporter TctB family 9 146 2.9E-22 T 14-10-2018 IPR009936 Protein of unknown function DUF1468 DB29_02237 d0a5a950cdb2db13373e990231ffff30 94 TIGRFAM TIGR03954 integ_memb_HG: integral membrane protein 2 85 2.0E-32 T 14-10-2018 IPR023845 Domain of unknown function DUF3817, transmembrane DB29_02237 d0a5a950cdb2db13373e990231ffff30 94 Pfam PF12823 Domain of unknown function (DUF3817) 1 85 5.5E-25 T 14-10-2018 IPR023845 Domain of unknown function DUF3817, transmembrane DB29_00010 51cb90048f6b5e53d44969c2aec71e98 67 Pfam PF13396 Phospholipase_D-nuclease N-terminal 22 64 3.0E-9 T 14-10-2018 IPR027379 Cardiolipin synthase N-terminal DB29_00463 2569a5a7af4aec00ae978dc549d5b5b9 67 Pfam PF11146 Protein of unknown function (DUF2905) 2 65 4.4E-23 T 14-10-2018 IPR021320 Protein of unknown function DUF2905 DB29_01868 bd519cea0760e475f94ae7c2b70c829f 176 Pfam PF11188 Protein of unknown function (DUF2975) 61 176 8.3E-8 T 14-10-2018 IPR021354 Protein of unknown function DUF2975 DB29_01790 7fefbf47189b2276d3e80566e59b4f51 235 SUPERFAMILY SSF53335 16 209 1.57E-8 T 14-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase DB29_04034 cfb5fe1217eeb58b56846aed32d862a7 307 ProDom PD177368 TRANSCRIPTION DNA-BINDING MOTILITY SWRB SWARMING YLXL REGULATION BH2428 243 291 3.0E-20 T 14-10-2018 DB29_01573 0d5b11575f4a8a8ad758be4fa5b6aadf 174 Pfam PF07331 Tripartite tricarboxylate transporter TctB family 19 169 1.7E-19 T 14-10-2018 IPR009936 Protein of unknown function DUF1468 DB29_01070 71e836e121890e5240f78349aa85039d 155 TIGRFAM TIGR01593 holin_tox_secr: toxin secretion/phage lysis holin 22 142 2.0E-28 T 14-10-2018 IPR006480 Bacteriophage holin family DB29_01070 71e836e121890e5240f78349aa85039d 155 Pfam PF05105 Bacteriophage holin family 28 130 1.8E-28 T 14-10-2018 IPR006480 Bacteriophage holin family DB29_00697 4188baed5eb3b74c8a03c2d94c03a334 346 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 6 331 1.0E-37 T 14-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 DB29_03976 b74280e117c5d7a852418a25eb8b18fd 74 Pfam PF06569 Protein of unknown function (DUF1128) 2 70 5.1E-26 T 14-10-2018 IPR009507 Protein of unknown function UPF0435 DB29_03976 b74280e117c5d7a852418a25eb8b18fd 74 Hamap MF_00829 UPF0435 protein . 4 71 18.221 T 14-10-2018 IPR009507 Protein of unknown function UPF0435 DB29_02434 eb10461b8523484474701a90fb0ff77d 403 Pfam PF01566 Natural resistance-associated macrophage protein 47 369 1.1E-21 T 14-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 DB29_03470 499f3ec1b1bc50a2997fc52d7216eb43 82 Pfam PF14165 YtzH-like protein 4 78 4.7E-11 T 14-10-2018 IPR025547 YtzH-like protein DB29_03381 801d80578ed8c9e2e0a8393d8de3cc86 108 Pfam PF14068 Putative membrane protein 8 108 2.7E-40 T 14-10-2018 IPR025917 Putative membrane protein YuiB DB29_04238 5928fd2e933f145fb3373d889f9acc34 305 Pfam PF05709 Phage tail protein 22 304 3.0E-22 T 14-10-2018 IPR008841 Siphovirus-type tail component DB29_02236 1a2d33281ba51bce1ba1e5bd8e270d2e 114 Pfam PF11181 Heat induced stress protein YflT 6 103 6.8E-32 T 14-10-2018 IPR025889 General stress protein 17M-like domain DB29_02531 01e6843b48512b4bddecea735a2283f7 193 Gene3D G3DSA:3.40.50.360 1 192 1.4E-48 T 14-10-2018 IPR029039 Flavoprotein-like superfamily DB29_02531 01e6843b48512b4bddecea735a2283f7 193 SUPERFAMILY SSF52218 1 190 6.52E-47 T 14-10-2018 IPR029039 Flavoprotein-like superfamily DB29_02531 01e6843b48512b4bddecea735a2283f7 193 Pfam PF02525 Flavodoxin-like fold 1 181 4.0E-41 T 14-10-2018 IPR003680 Flavodoxin-like fold DB29_03634 51091bb71236ba4bf03812bf85468642 224 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 1 76 8.3E-21 T 14-10-2018 IPR010627 Peptidase A24A, N-terminal DB29_03634 51091bb71236ba4bf03812bf85468642 224 Pfam PF01478 Type IV leader peptidase family 89 189 2.9E-9 T 14-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 DB29_02164 c8f316f7e6a62b2b0f4f0c6c36d0746c 201 Pfam PF02698 DUF218 domain 32 157 2.1E-24 T 14-10-2018 IPR003848 Domain of unknown function DUF218 DB29_01637 c4dd62bfec37a31656b050a04a2f0cb1 162 Pfam PF06695 Putative small multi-drug export protein 32 139 3.4E-10 T 14-10-2018 IPR009577 Putative small multi-drug export DB29_00994 0a64c5fb15522af2880f9c81c83d2615 179 Pfam PF02417 Chromate transporter 6 171 2.8E-36 T 14-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 DB29_04067 7a7ff9394eb96404d2954ea44a8d56bb 73 Pfam PF14035 YlzJ-like protein 3 66 7.4E-23 T 14-10-2018 IPR025619 YlzJ-like protein DB29_01026 c5c9bf1f10689982586922c3c371541f 529 Pfam PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase 43 376 2.6E-17 T 14-10-2018 IPR002591 Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase GO:0003824 DB29_01026 c5c9bf1f10689982586922c3c371541f 529 SUPERFAMILY SSF53649 35 513 3.49E-48 T 14-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 DB29_01350 0022a158d63b26eaff5900f52eb478e0 117 Pfam PF10941 Protein of unknown function DUF2620 1 115 3.6E-48 T 14-10-2018 IPR021238 Protein of unknown function DUF2620 DB29_04332 5e4ea0b1519d545c1d504fbbc153c050 203 Pfam PF14005 YpjP-like protein 71 201 7.1E-53 T 14-10-2018 IPR025616 YpjP-like protein DB29_00214 1db66daa480ff64a6a2c32cef0f3a517 73 Pfam PF14004 Protein of unknown function (DUF4227) 3 73 3.5E-28 T 14-10-2018 IPR025321 Protein of unknown function DUF4227 DB29_03549 5342bd8a2d1aed08087eb9f059b4658e 480 Pfam PF07261 Replication initiation and membrane attachment 326 389 4.4E-8 T 14-10-2018 IPR006343 DnaD domain DB29_04263 25b0506338cfee1b4a9647fb3636995b 247 SUPERFAMILY SSF158560 2 73 3.14E-15 T 14-10-2018 DB29_01114 ffe4f457de3703367b8927f20319fde1 425 Pfam PF03611 PTS system sugar-specific permease component 11 397 1.7E-106 T 14-10-2018 IPR004703 Phosphotransferase system, sugar-specific permease component GO:0009401|GO:0016021 DB29_03882 ccaca2dc5143f1114f252600bb5b5011 115 Pfam PF03626 Prokaryotic Cytochrome C oxidase subunit IV 31 100 4.8E-16 T 14-10-2018 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 DB29_01496 99d4d87473850b70fa6f2fc10e0bab7f 523 Pfam PF04740 LXG domain of WXG superfamily 2 200 6.2E-57 T 14-10-2018 IPR006829 LXG domain DB29_01328 7bb2b725d095796b1bea5a2d8d469cbc 106 SUPERFAMILY SSF140453 4 96 4.05E-7 T 14-10-2018 IPR036689 ESAT-6-like superfamily DB29_01328 7bb2b725d095796b1bea5a2d8d469cbc 106 Gene3D G3DSA:1.10.287.1060 1 96 1.9E-10 T 14-10-2018 DB29_02380 91ec810a03a8ee9370c80f43cd1df5c2 392 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 319 343 - T 14-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DB29_02380 91ec810a03a8ee9370c80f43cd1df5c2 392 Pfam PF01098 Cell cycle protein 13 362 4.4E-80 T 14-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 DB29_03821 e56085f69fcee6906bc8c4bf0396d91a 142 TIGRFAM TIGR04191 YphP_YqiW: putative bacilliredoxin, YphP/YqiW family 7 141 2.0E-59 T 14-10-2018 IPR009474 Putative bacilliredoxin, YphP/YqiW family DB29_03821 e56085f69fcee6906bc8c4bf0396d91a 142 Gene3D G3DSA:3.40.30.10 24 141 2.2E-51 T 14-10-2018 DB29_03821 e56085f69fcee6906bc8c4bf0396d91a 142 Pfam PF06491 Disulphide isomerase 7 141 1.3E-58 T 14-10-2018 IPR009474 Putative bacilliredoxin, YphP/YqiW family DB29_03295 8c581278f2b6b3cc0f74dc540ac62e36 131 Pfam PF07681 DoxX 8 88 2.5E-19 T 14-10-2018 IPR032808 DoxX family DB29_03928 446522b09b207cee9cffda91ee37d36e 98 Pfam PF02325 YGGT family 21 85 8.8E-19 T 14-10-2018 IPR003425 CCB3/YggT GO:0016020 DB29_03788 83a46d9eb0c9ad1714ede078afff5793 109 ProDom PD064940 YQHV TRANSMEMBRANE MEMBRANE BH2798 35 108 4.0E-32 T 14-10-2018 IPR020390 Uncharacterised protein family YqhV DB29_03788 83a46d9eb0c9ad1714ede078afff5793 109 Pfam PF10942 Protein of unknown function (DUF2619) 35 103 9.4E-29 T 14-10-2018 IPR020390 Uncharacterised protein family YqhV DB29_01447 bc04d274a41227a6c9c714593b62417c 312 Pfam PF06675 Protein of unknown function (DUF1177) 39 309 3.4E-139 T 14-10-2018 IPR009561 Protein of unknown function DUF1177 DB29_01099 024216af6532364277d513f09d908dc3 208 Pfam PF07849 Protein of unknown function (DUF1641) 127 155 6.2E-5 T 14-10-2018 IPR012440 Protein of unknown function DUF1641 DB29_04132 fb5de3dd191e645db39e13ab3ab72f1b 45 Pfam PF08177 Small acid-soluble spore protein N family 5 45 1.3E-18 T 14-10-2018 IPR012612 Small acid-soluble spore protein, SspN GO:0030436|GO:0042601 DB29_00455 ba2eee7105a4beb0e196c092f629dbb9 96 Pfam PF13797 Post-transcriptional regulator 7 87 1.6E-29 T 14-10-2018 IPR025716 Post-transcriptional regulator DB29_04223 c6e318449564268aa50a6e50f2d03e98 460 Pfam PF05133 Phage portal protein, SPP1 Gp6-like 19 443 1.2E-92 T 14-10-2018 IPR021145 Portal protein DB29_04223 c6e318449564268aa50a6e50f2d03e98 460 TIGRFAM TIGR01538 portal_SPP1: phage portal protein, SPP1 family 59 440 1.8E-62 T 14-10-2018 IPR006428 Portal protein, SPP1-type DB29_02177 20cc310ebc86c517b6609ef83754a650 142 Pfam PF13115 YtkA-like 33 111 4.9E-9 T 14-10-2018 IPR032693 YtkA-like domain DB29_02501 93d720c668053d952b7f4a1aec40ee44 157 Pfam PF06713 Bacterial PH domain 61 137 1.4E-17 T 14-10-2018 IPR009589 Sublancin immunity protein SunI GO:0030153 DB29_02952 eac08a15279436bf3d3e811d3d33f969 446 Pfam PF07670 Nucleoside recognition 136 231 6.8E-8 T 14-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 DB29_02178 e4cf358288ab363d40c01c70e5d56b2b 130 Pfam PF07485 Domain of Unknown Function (DUF1259) 14 126 1.4E-30 T 14-10-2018 IPR011094 Uncharacterised protein family, LppY/LpqO DB29_03070 fc059aeb114abc6e2f1a0d8801c1f7bf 540 SUPERFAMILY SSF52317 43 332 1.42E-10 T 14-10-2018 IPR029062 Class I glutamine amidotransferase-like DB29_02119 f25e81987d64b0432277167bc8b08c76 603 SUPERFAMILY SSF58104 330 526 1.14E-6 T 14-10-2018 DB29_02119 f25e81987d64b0432277167bc8b08c76 603 Gene3D G3DSA:1.10.287.950 396 544 3.6E-7 T 14-10-2018 DB29_03382 7265802afd6056369a1df4a9e073fa66 206 SUPERFAMILY SSF50685 116 158 7.32E-8 T 14-10-2018 IPR036908 RlpA-like domain superfamily DB29_03382 7265802afd6056369a1df4a9e073fa66 206 Pfam PF06725 3D domain 117 178 8.6E-20 T 14-10-2018 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 DB29_00100 a18da2036fa4111221a678ddf66b4b43 248 Pfam PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 25 232 1.9E-65 T 14-10-2018 IPR009920 Heptaprenyl diphosphate synthase subunit 1 GO:0009234 KEGG: 00900+2.5.1.30|MetaCyc: PWY-5807 DB29_01661 2fe2ffa819ed4efe1abf20a7d70df1c7 227 Pfam PF14196 L-2-amino-thiazoline-4-carboxylic acid hydrolase 84 221 1.9E-22 T 14-10-2018 IPR026002 L-2-amino-thiazoline-4-carboxylic acid hydrolase DB29_00008 d70eefd2012fca4b711e94ab15641704 259 Pfam PF12679 ABC-2 family transporter protein 77 215 7.8E-7 T 14-10-2018 IPR032688 ABC-2 family transporter protein GO:0055085 DB29_03078 0b61dd98e514e4a2b10b0e024649c2ef 101 Pfam PF09860 Uncharacterized protein conserved in bacteria (DUF2087) 21 86 1.3E-21 T 14-10-2018 IPR018656 Domain of unknown function DUF2087 DB29_02017 899bbec3ecd370fd05bb9f9db8bb7ef7 75 Pfam PF10704 Protein of unknown function (DUF2508) 1 69 4.5E-19 T 14-10-2018 IPR019644 Protein of unknown function DUF2508 DB29_03353 74419cb9231852cbfdd0a8855bdac87a 180 Pfam PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) 14 159 6.0E-17 T 14-10-2018 IPR019076 Sporulation lipoprotein YhcN/YlaJ-like DB29_00821 cab6a40fd1dc5c73642387f02187839c 234 Pfam PF12730 ABC-2 family transporter protein 8 191 2.1E-9 T 14-10-2018 IPR032688 ABC-2 family transporter protein GO:0055085 DB29_03503 608c1ccf7eccf04cf3c1e6b7fe0ecabc 182 Pfam PF06271 RDD family 39 174 1.0E-23 T 14-10-2018 IPR010432 RDD DB29_00934 e1ea71a45e7fde894ed383fba5600b47 545 Pfam PF04740 LXG domain of WXG superfamily 3 199 3.2E-52 T 14-10-2018 IPR006829 LXG domain DB29_04282 fe612ebe0db5cd28f681d3b2ab0366b4 212 Pfam PF02517 CAAX protease self-immunity 91 188 5.7E-12 T 14-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 DB29_00698 07038d36e1d56d88d04af07f66055e29 266 Gene3D G3DSA:2.50.20.10 121 256 2.3E-6 T 14-10-2018 DB29_00970 dcbbcee4cc52b53410392a9288b24b2a 68 Pfam PF14044 NETI protein 7 59 2.2E-27 T 14-10-2018 IPR025930 NETI protein DB29_04243 b070169b076af88b454f9183c67d411e 367 Pfam PF14082 Domain of unknown function (DUF4263) 201 356 1.7E-6 T 14-10-2018 IPR025359 Protein of unknown function DUF4263 DB29_01442 a38f470c35742d908f28ec7b1a659cab 95 Pfam PF02417 Chromate transporter 11 94 2.4E-24 T 14-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 DB29_00110 1e37ac40faf872cc4bbda616325bd900 207 PIRSF PIRSF036710 1 198 2.1E-27 T 14-10-2018 IPR014617 Predicted membrane protein, Bacillus YphA type DB29_02109 b54cf44af4fd385f9226ff6230856294 219 Pfam PF13346 ABC-2 family transporter protein 3 215 8.9E-46 T 14-10-2018 IPR025699 ABC-2 membrane transporter-like DB29_00072 a69973a51945582699a806c93b73c792 232 Pfam PF04298 Putative neutral zinc metallopeptidase 6 227 5.9E-92 T 14-10-2018 IPR007395 Putative neutral zinc metallopeptidase DB29_00803 bad8cb10f2fc36c085f15c3afdbc7209 87 Pfam PF17279 Family of unknown function (DUF5344) 1 85 1.7E-17 T 14-10-2018 DB29_00222 9d992dcaa9b8e9aae28da844f12b3bc2 186 Hamap MF_01515 UPF0316 protein . 2 170 29.28 T 14-10-2018 IPR022930 Protein of unknown function UPF0316 DB29_0P0038 a37af2de71ce5ccf0a18488247663f6a 76 Pfam PF12648 TcpE family 4 46 2.6E-7 T 14-10-2018 IPR025608 TcpE family DB29_03795 9aba14e0a647484d8106beed6f1c36dd 220 TIGRFAM TIGR02830 spore_III_AG: stage III sporulation protein AG 27 216 1.3E-72 T 14-10-2018 IPR014195 Sporulation stage III, protein AG