locus-tag class description ABC0001 PF08299 Bacterial dnaA protein helix-turn-helix ABC0001 PF00308 Bacterial dnaA protein ABC0001 PF11638 DnaA N-terminal domain ABC0002 PF02768 DNA polymerase III beta subunit, C-terminal domain ABC0002 PF02767 DNA polymerase III beta subunit, central domain ABC0002 PF00712 DNA polymerase III beta subunit, N-terminal domain ABC0004 PF02463 RecF/RecN/SMC N terminal domain ABC0005 PF04025 Domain of unknown function (DUF370) ABC0006 PF00204 DNA gyrase B ABC0006 PF00986 DNA gyrase B subunit, carboxyl terminus ABC0006 PF01751 Toprim domain ABC0006 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABC0007 PF03989 DNA gyrase C-terminal domain, beta-propeller ABC0007 PF00521 DNA gyrase/topoisomerase IV, subunit A ABC0009 PF01569 PAP2 superfamily ABC0010 PF14175 YaaC-like Protein ABC0011 PF00478 IMP dehydrogenase / GMP reductase domain ABC0011 PF00571 CBS domain ABC0012 PF07943 Penicillin-binding protein 5, C-terminal domain ABC0012 PF00768 D-alanyl-D-alanine carboxypeptidase ABC0013 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ABC0013 PF02403 Seryl-tRNA synthetase N-terminal domain ABC0014 PF00795 Carbon-nitrogen hydrolase ABC0015 PF13556 PucR C-terminal helix-turn-helix domain ABC0015 PF17853 GGDEF-like domain ABC0015 PF07905 Purine catabolism regulatory protein-like family ABC0016 PF13426 PAS domain ABC0016 PF00158 Sigma-54 interaction domain ABC0016 PF02954 Bacterial regulatory protein, Fis family ABC0017 PF00202 Aminotransferase class-III ABC0020 PF01321 Creatinase/Prolidase N-terminal domain ABC0020 PF00557 Metallopeptidase family M24 ABC0021 PF01053 Cys/Met metabolism PLP-dependent enzyme ABC0022 PF07687 Peptidase dimerisation domain ABC0022 PF01546 Peptidase family M20/M25/M40 ABC0023 PF03447 Homoserine dehydrogenase, NAD binding domain ABC0023 PF00742 Homoserine dehydrogenase ABC0024 PF00171 Aldehyde dehydrogenase family ABC0026 PF00497 Bacterial extracellular solute-binding proteins, family 3 ABC0027 PF00528 Binding-protein-dependent transport system inner membrane component ABC0028 PF00005 ABC transporter ABC0029 PF00005 ABC transporter ABC0029 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ABC0030 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ABC0030 PF00005 ABC transporter ABC0033 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ABC0034 PF14437 MafB19-like deaminase ABC0035 PF00574 Clp protease ABC0037 PF12169 DNA polymerase III subunits gamma and tau domain III ABC0038 PF02575 YbaB/EbfC DNA-binding family ABC0039 PF13662 Toprim domain ABC0039 PF02132 RecR protein ABC0040 PF10704 Protein of unknown function (DUF2508) ABC0042 PF00465 Iron-containing alcohol dehydrogenase ABC0044 PF00989 PAS fold ABC0044 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABC0044 PF00512 His Kinase A (phospho-acceptor) domain ABC0044 PF08447 PAS fold ABC0045 PF00158 Sigma-54 interaction domain ABC0045 PF00072 Response regulator receiver domain ABC0045 PF02954 Bacterial regulatory protein, Fis family ABC0046 PF08240 Alcohol dehydrogenase GroES-like domain ABC0046 PF00107 Zinc-binding dehydrogenase ABC0047 PF00171 Aldehyde dehydrogenase family ABC0049 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain ABC0049 PF01276 Orn/Lys/Arg decarboxylase, major domain ABC0050 PF02223 Thymidylate kinase ABC0051 PF06153 Cyclic-di-AMP receptor ABC0052 PF09115 DNA polymerase III, delta subunit, C terminal ABC0053 PF04468 PSP1 C-terminal conserved region ABC0054 PF06156 Initiation control protein YabA ABC0055 PF05175 Methyltransferase small domain ABC0056 PF01541 GIY-YIG catalytic domain ABC0057 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ABC0058 PF18277 AbrB C-terminal domain ABC0058 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin ABC0061 PF08264 Anticodon-binding domain of tRNA ABC0061 PF01588 Putative tRNA binding domain ABC0061 PF09334 tRNA synthetases class I (M) ABC0063 PF00544 Pectate lyase ABC0064 PF12848 ABC transporter ABC0064 PF16326 ABC transporter C-terminal domain ABC0064 PF00005 ABC transporter ABC0065 PF02702 Osmosensitive K+ channel His kinase sensor domain ABC0065 PF00512 His Kinase A (phospho-acceptor) domain ABC0065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABC0065 PF13493 Domain of unknown function (DUF4118) ABC0065 PF00582 Universal stress protein family ABC0067 PF01026 TatD related DNase ABC0068 PF06725 3D domain ABC0068 PF03990 G5-linked-Ubiquitin-like domain ABC0068 PF07501 G5 domain ABC0069 PF13662 Toprim domain ABC0069 PF13331 Domain of unknown function (DUF4093) ABC0070 PF00398 Ribosomal RNA adenine dimethylase ABC0071 PF05582 YabG peptidase U57 ABC0072 PF06257 Biofilm formation stimulator VEG ABC0073 PF00269 Small, acid-soluble spore proteins, alpha/beta type ABC0074 PF00288 GHMP kinases N terminal domain ABC0074 PF08544 GHMP kinases C terminal ABC0075 PF09182 Bacterial purine repressor, N-terminal ABC0075 PF00156 Phosphoribosyl transferase domain ABC0076 PF01042 Endoribonuclease L-PSP ABC0077 PF04026 SpoVG ABC0078 PF00132 Bacterial transferase hexapeptide (six repeats) ABC0078 PF12804 MobA-like NTP transferase domain ABC0079 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase ABC0079 PF14572 Phosphoribosyl synthetase-associated domain ABC0080 PF01386 Ribosomal L25p family ABC0080 PF14693 Ribosomal protein TL5, C-terminal domain ABC0081 PF01195 Peptidyl-tRNA hydrolase ABC0082 PF10955 Protein of unknown function (DUF2757) ABC0083 PF17757 UvrB interaction domain ABC0083 PF02559 CarD-like/TRCF domain ABC0083 PF00271 Helicase conserved C-terminal domain ABC0083 PF00270 DEAD/DEAH box helicase ABC0083 PF03461 TRCF domain ABC0084 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin ABC0084 PF15714 Stage V sporulation protein T C-terminal, transcription factor ABC0086 PF04101 Glycosyltransferase family 28 C-terminal domain ABC0086 PF03033 Glycosyltransferase family 28 N-terminal domain ABC0088 PF01943 Polysaccharide biosynthesis protein ABC0088 PF14667 Polysaccharide biosynthesis C-terminal domain ABC0089 PF03819 MazG nucleotide pyrophosphohydrolase domain ABC0089 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ABC0090 PF01479 S4 domain ABC0091 PF13419 Haloacid dehalogenase-like hydrolase ABC0092 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ABC0092 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ABC0093 PF00583 Acetyltransferase (GNAT) family ABC0094 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABC0096 PF07873 YabP family ABC0097 PF09578 Spore cortex protein YabQ (Spore_YabQ) ABC0099 PF00575 S1 RNA binding domain ABC0100 PF03600 Citrate transporter ABC0101 PF07228 Stage II sporulation protein E (SpoIIE) ABC0102 PF00092 von Willebrand factor type A domain ABC0103 PF00069 Protein kinase domain ABC0104 PF01171 PP-loop family ABC0104 PF11734 TilS substrate C-terminal domain ABC0107 PF03309 Type III pantothenate kinase ABC0108 PF01430 Hsp33 protein ABC0109 PF00291 Pyridoxal-phosphate dependent enzyme ABC0110 PF04715 Anthranilate synthase component I, N terminal region ABC0110 PF00425 chorismate binding enzyme ABC0111 PF00117 Glutamine amidotransferase class-I ABC0112 PF01063 Amino-transferase class IV ABC0113 PF00809 Pterin binding enzyme ABC0114 PF02152 Dihydroneopterin aldolase ABC0115 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) ABC0116 PF01207 Dihydrouridine synthase (Dus) ABC0117 PF00152 tRNA synthetases class II (D, K and N) ABC0117 PF01336 OB-fold nucleic acid binding domain ABC0118 PF05848 CtsR N-terminal HTH domain ABC0118 PF17727 CtsR C-terminal dimerization domain ABC0119 PF02151 UvrB/uvrC motif ABC0120 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain ABC0121 PF17871 AAA lid domain ABC0121 PF00004 ATPase family associated with various cellular activities (AAA) ABC0121 PF07724 AAA domain (Cdc48 subfamily) ABC0121 PF02861 Clp amino terminal domain, pathogenicity island component ABC0121 PF10431 C-terminal, D2-small domain, of ClpB protein ABC0122 PF18073 Rubredoxin metal binding domain ABC0123 PF02457 DisA bacterial checkpoint controller nucleotide-binding ABC0123 PF10635 DisA bacterial checkpoint controller linker region ABC0125 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase ABC0126 PF02542 YgbB family ABC0127 PF00749 tRNA synthetases class I (E and Q), catalytic domain ABC0128 PF00132 Bacterial transferase hexapeptide (six repeats) ABC0128 PF06426 Serine acetyltransferase, N-terminal ABC0129 PF09190 DALR domain ABC0129 PF01406 tRNA synthetases class I (C) catalytic domain ABC0130 PF00636 Ribonuclease III domain ABC0131 PF08032 RNA 2'-O ribose methyltransferase substrate binding ABC0131 PF00588 SpoU rRNA Methylase family ABC0132 PF05991 YacP-like NYN domain ABC0133 PF08281 Sigma-70, region 4 ABC0133 PF04542 Sigma-70 region 2 ABC0134 PF00471 Ribosomal protein L33 ABC0135 PF00584 SecE/Sec61-gamma subunits of protein translocation complex ABC0136 PF00467 KOW motif ABC0136 PF02357 Transcription termination factor nusG ABC0137 PF03946 Ribosomal protein L11, N-terminal domain ABC0137 PF00298 Ribosomal protein L11, RNA binding domain ABC0138 PF00687 Ribosomal protein L1p/L10e family ABC0139 PF00466 Ribosomal protein L10 ABC0140 PF16320 Ribosomal protein L7/L12 dimerisation domain ABC0140 PF00542 Ribosomal protein L7/L12 C-terminal domain ABC0141 PF05175 Methyltransferase small domain ABC0142 PF00562 RNA polymerase Rpb2, domain 6 ABC0142 PF10385 RNA polymerase beta subunit external 1 domain ABC0142 PF04565 RNA polymerase Rpb2, domain 3 ABC0142 PF04561 RNA polymerase Rpb2, domain 2 ABC0142 PF04563 RNA polymerase beta subunit ABC0142 PF04560 RNA polymerase Rpb2, domain 7 ABC0143 PF00623 RNA polymerase Rpb1, domain 2 ABC0143 PF04997 RNA polymerase Rpb1, domain 1 ABC0143 PF04983 RNA polymerase Rpb1, domain 3 ABC0143 PF05000 RNA polymerase Rpb1, domain 4 ABC0143 PF04998 RNA polymerase Rpb1, domain 5 ABC0144 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family ABC0145 PF00164 Ribosomal protein S12/S23 ABC0146 PF00177 Ribosomal protein S7p/S5e ABC0147 PF03764 Elongation factor G, domain IV ABC0147 PF00009 Elongation factor Tu GTP binding domain ABC0147 PF14492 Elongation Factor G, domain II ABC0147 PF03144 Elongation factor Tu domain 2 ABC0147 PF00679 Elongation factor G C-terminus ABC0148 PF00009 Elongation factor Tu GTP binding domain ABC0148 PF03144 Elongation factor Tu domain 2 ABC0148 PF03143 Elongation factor Tu C-terminal domain ABC0149 PF00338 Ribosomal protein S10p/S20e ABC0150 PF00297 Ribosomal protein L3 ABC0151 PF00573 Ribosomal protein L4/L1 family ABC0152 PF00276 Ribosomal protein L23 ABC0153 PF03947 Ribosomal Proteins L2, C-terminal domain ABC0153 PF00181 Ribosomal Proteins L2, RNA binding domain ABC0154 PF00203 Ribosomal protein S19 ABC0155 PF00237 Ribosomal protein L22p/L17e ABC0156 PF00189 Ribosomal protein S3, C-terminal domain ABC0156 PF07650 KH domain ABC0157 PF00252 Ribosomal protein L16p/L10e ABC0158 PF00831 Ribosomal L29 protein ABC0159 PF00366 Ribosomal protein S17 ABC0160 PF00238 Ribosomal protein L14p/L23e ABC0161 PF00467 KOW motif ABC0161 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 ABC0162 PF00281 Ribosomal protein L5 ABC0162 PF00673 ribosomal L5P family C-terminus ABC0163 PF00253 Ribosomal protein S14p/S29e ABC0164 PF00410 Ribosomal protein S8 ABC0165 PF00347 Ribosomal protein L6 ABC0166 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast ABC0167 PF03719 Ribosomal protein S5, C-terminal domain ABC0167 PF00333 Ribosomal protein S5, N-terminal domain ABC0168 PF00327 Ribosomal protein L30p/L7e ABC0169 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A ABC0170 PF00344 SecY translocase ABC0171 PF05191 Adenylate kinase, active site lid ABC0172 PF00557 Metallopeptidase family M24 ABC0173 PF01176 Translation initiation factor 1A / IF-1 ABC0174 PF00444 Ribosomal protein L36 ABC0175 PF00416 Ribosomal protein S13/S18 ABC0176 PF00411 Ribosomal protein S11 ABC0177 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain ABC0177 PF01000 RNA polymerase Rpb3/RpoA insert domain ABC0177 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain ABC0178 PF01196 Ribosomal protein L17 ABC0179 PF00005 ABC transporter ABC0180 PF00005 ABC transporter ABC0182 PF01416 tRNA pseudouridine synthase ABC0183 PF00572 Ribosomal protein L13 ABC0184 PF00380 Ribosomal protein S9/S16 ABC0188 PF02915 Rubrerythrin ABC0192 PF01520 N-acetylmuramoyl-L-alanine amidase ABC0193 PF03123 CAT RNA binding domain ABC0193 PF00874 PRD domain ABC0194 PF00367 phosphotransferase system, EIIB ABC0194 PF02378 Phosphotransferase system, EIIC ABC0194 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 ABC0195 PF10609 NUBPL iron-transfer P-loop NTPase ABC0197 PF17418 Sporulation delaying protein SdpA ABC0200 PF17898 Spore germination GerD central core domain ABC0202 PF01522 Polysaccharide deacetylase ABC0205 PF13649 Methyltransferase domain ABC0206 PF13411 MerR HTH family regulatory protein ABC0206 PF07739 TipAS antibiotic-recognition domain ABC0210 PF13411 MerR HTH family regulatory protein ABC0219 PF03401 Tripartite tricarboxylate transporter family receptor ABC0220 PF01842 ACT domain ABC0220 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ABC0220 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ABC0221 PF00465 Iron-containing alcohol dehydrogenase ABC0221 PF00171 Aldehyde dehydrogenase family ABC0222 PF00701 Dihydrodipicolinate synthetase family ABC0223 PF06506 Propionate catabolism activator ABC0223 PF02954 Bacterial regulatory protein, Fis family ABC0223 PF00158 Sigma-54 interaction domain ABC0224 PF00403 Heavy-metal-associated domain ABC0226 PF02630 SCO1/SenC ABC0228 PF00032 Cytochrome b(C-terminal)/b6/petD ABC0228 PF13442 Cytochrome C oxidase, cbb3-type, subunit III ABC0230 PF13115 YtkA-like ABC0231 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ABC0231 PF00005 ABC transporter ABC0232 PF00528 Binding-protein-dependent transport system inner membrane component ABC0233 PF00528 Binding-protein-dependent transport system inner membrane component ABC0234 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ABC0235 PF00107 Zinc-binding dehydrogenase ABC0235 PF08240 Alcohol dehydrogenase GroES-like domain ABC0236 PF00657 GDSL-like Lipase/Acylhydrolase ABC0237 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ABC0239 PF04542 Sigma-70 region 2 ABC0239 PF08281 Sigma-70, region 4 ABC0240 PF13490 Putative zinc-finger ABC0241 PF02457 DisA bacterial checkpoint controller nucleotide-binding ABC0243 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ABC0243 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ABC0243 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ABC0243 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ABC0245 PF01380 SIS domain ABC0246 PF12833 Helix-turn-helix domain ABC0246 PF02311 AraC-like ligand binding domain ABC0250 PF01381 Helix-turn-helix ABC0251 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase ABC0252 PF00005 ABC transporter ABC0254 PF00486 Transcriptional regulatory protein, C terminal ABC0254 PF00072 Response regulator receiver domain ABC0255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABC0256 PF00440 Bacterial regulatory proteins, tetR family ABC0257 PF07690 Major Facilitator Superfamily ABC0259 PF00005 ABC transporter ABC0261 PF00005 ABC transporter ABC0263 PF00749 tRNA synthetases class I (E and Q), catalytic domain ABC0265 PF05569 BlaR1 peptidase M56 ABC0265 PF00905 Penicillin binding protein transpeptidase domain ABC0266 PF03965 Penicillinase repressor ABC0267 PF07827 KNTase C-terminal domain ABC0273 PF13649 Methyltransferase domain ABC0274 PF00579 tRNA synthetases class I (W and Y) ABC0276 PF00892 EamA-like transporter family ABC0281 PF10710 Protein of unknown function (DUF2512) ABC0282 PF00293 NUDIX domain ABC0284 PF02028 BCCT, betaine/carnitine/choline family transporter ABC0285 PF02080 TrkA-C domain ABC0285 PF02254 TrkA-N domain ABC0286 PF00561 alpha/beta hydrolase fold ABC0287 PF07662 Na+ dependent nucleoside transporter C-terminus ABC0287 PF07670 Nucleoside recognition ABC0287 PF01773 Na+ dependent nucleoside transporter N-terminus ABC0290 PF00210 Ferritin-like domain ABC0291 PF01594 AI-2E family transporter ABC0292 PF01256 Carbohydrate kinase ABC0292 PF03853 YjeF-related protein N-terminus ABC0298 PF13802 Galactose mutarotase-like ABC0298 PF01055 Glycosyl hydrolases family 31 ABC0299 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component ABC0301 PF03480 Bacterial extracellular solute-binding protein, family 7 ABC0302 PF00356 Bacterial regulatory proteins, lacI family ABC0303 PF13411 MerR HTH family regulatory protein ABC0304 PF00664 ABC transporter transmembrane region ABC0304 PF00005 ABC transporter ABC0305 PF01380 SIS domain ABC0305 PF01418 Helix-turn-helix domain, rpiR family ABC0306 PF04166 Pyridoxal phosphate biosynthetic protein PdxA ABC0307 PF17042 Nucleotide-binding C-terminal domain ABC0307 PF07005 Sugar-binding N-terminal domain ABC0308 PF03812 2-keto-3-deoxygluconate permease ABC0311 PF01380 SIS domain ABC0312 PF02378 Phosphotransferase system, EIIC ABC0312 PF00367 phosphotransferase system, EIIB ABC0314 PF00356 Bacterial regulatory proteins, lacI family ABC0315 PF00232 Glycosyl hydrolase family 1 ABC0316 PF00480 ROK family ABC0317 PF00528 Binding-protein-dependent transport system inner membrane component ABC0318 PF00528 Binding-protein-dependent transport system inner membrane component ABC0320 PF00150 Cellulase (glycosyl hydrolase family 5) ABC0323 PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) ABC0326 PF02954 Bacterial regulatory protein, Fis family ABC0326 PF00158 Sigma-54 interaction domain ABC0326 PF00989 PAS fold ABC0327 PF00465 Iron-containing alcohol dehydrogenase ABC0329 PF04960 Glutaminase ABC0330 PF00465 Iron-containing alcohol dehydrogenase ABC0331 PF00171 Aldehyde dehydrogenase family ABC0332 PF03323 Bacillus/Clostridium GerA spore germination protein ABC0334 PF00583 Acetyltransferase (GNAT) family ABC0335 PF00202 Aminotransferase class-III ABC0336 PF06339 Ectoine synthase ABC0339 PF00528 Binding-protein-dependent transport system inner membrane component ABC0340 PF00528 Binding-protein-dependent transport system inner membrane component ABC0343 PF13193 AMP-binding enzyme C-terminal domain ABC0343 PF00501 AMP-binding enzyme ABC0344 PF13193 AMP-binding enzyme C-terminal domain ABC0344 PF00501 AMP-binding enzyme ABC0345 PF02803 Thiolase, C-terminal domain ABC0345 PF00108 Thiolase, N-terminal domain ABC0346 PF00106 short chain dehydrogenase ABC0347 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term ABC0347 PF12833 Helix-turn-helix domain ABC0348 PF00083 Sugar (and other) transporter ABC0349 PF02082 Transcriptional regulator ABC0350 PF00970 Oxidoreductase FAD-binding domain ABC0350 PF00175 Oxidoreductase NAD-binding domain ABC0350 PF00042 Globin ABC0351 PF03009 Glycerophosphoryl diester phosphodiesterase family ABC0352 PF00005 ABC transporter ABC0352 PF17912 MalK OB fold domain ABC0353 PF00528 Binding-protein-dependent transport system inner membrane component ABC0354 PF00528 Binding-protein-dependent transport system inner membrane component ABC0355 PF13416 Bacterial extracellular solute-binding protein ABC0356 PF03009 Glycerophosphoryl diester phosphodiesterase family ABC0357 PF07690 Major Facilitator Superfamily ABC0360 PF04309 Glycerol-3-phosphate responsive antiterminator ABC0361 PF00528 Binding-protein-dependent transport system inner membrane component ABC0362 PF00528 Binding-protein-dependent transport system inner membrane component ABC0363 PF03009 Glycerophosphoryl diester phosphodiesterase family ABC0365 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ABC0365 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ABC0374 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ABC0374 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ABC0374 PF06134 L-rhamnose isomerase (RhaA) ABC0375 PF00596 Class II Aldolase and Adducin N-terminal domain ABC0376 PF05336 L-rhamnose mutarotase ABC0377 PF07690 Major Facilitator Superfamily ABC0378 PF12833 Helix-turn-helix domain ABC0379 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ABC0379 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ABC0381 PF03786 D-mannonate dehydratase (UxuA) ABC0383 PF06580 Histidine kinase ABC0383 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABC0383 PF02743 Cache domain ABC0383 PF00672 HAMP domain ABC0384 PF12833 Helix-turn-helix domain ABC0384 PF00072 Response regulator receiver domain ABC0385 PF13416 Bacterial extracellular solute-binding protein ABC0386 PF00528 Binding-protein-dependent transport system inner membrane component ABC0387 PF00528 Binding-protein-dependent transport system inner membrane component ABC0389 PF18719 ArlS sensor domain ABC0389 PF00512 His Kinase A (phospho-acceptor) domain ABC0389 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABC0390 PF00072 Response regulator receiver domain ABC0390 PF00486 Transcriptional regulatory protein, C terminal ABC0391 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABC0391 PF03466 LysR substrate binding domain ABC0393 PF18370 Rhamnogalacturonan I lyases beta-sheet domain ABC0395 PF00528 Binding-protein-dependent transport system inner membrane component ABC0396 PF00528 Binding-protein-dependent transport system inner membrane component ABC0397 PF06964 Alpha-L-arabinofuranosidase C-terminal domain ABC0399 PF00528 Binding-protein-dependent transport system inner membrane component ABC0400 PF00528 Binding-protein-dependent transport system inner membrane component ABC0401 PF04854 Protein of unknown function, DUF624 ABC0403 PF12833 Helix-turn-helix domain ABC0403 PF02311 AraC-like ligand binding domain ABC0404 PF13344 Haloacid dehalogenase-like hydrolase ABC0405 PF13685 Iron-containing alcohol dehydrogenase ABC0406 PF00596 Class II Aldolase and Adducin N-terminal domain ABC0407 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ABC0407 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ABC0408 PF02610 L-arabinose isomerase ABC0408 PF11762 L-arabinose isomerase C-terminal domain ABC0409 PF13407 Periplasmic binding protein domain ABC0410 PF00005 ABC transporter ABC0411 PF02653 Branched-chain amino acid transport system / permease component ABC0412 PF02056 Family 4 glycosyl hydrolase ABC0412 PF11975 Family 4 glycosyl hydrolase C-terminal domain ABC0416 PF00072 Response regulator receiver domain ABC0416 PF04397 LytTr DNA-binding domain ABC0417 PF00893 Small Multidrug Resistance protein ABC0418 PF00893 Small Multidrug Resistance protein ABC0419 PF00440 Bacterial regulatory proteins, tetR family ABC0419 PF17934 Tetracyclin repressor-like, C-terminal domain ABC0420 PF07690 Major Facilitator Superfamily ABC0421 PF00455 DeoR C terminal sensor domain ABC0421 PF08220 DeoR-like helix-turn-helix domain ABC0422 PF00171 Aldehyde dehydrogenase family ABC0423 PF04962 KduI/IolB family ABC0424 PF00294 pfkB family carbohydrate kinase ABC0425 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ABC0425 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ABC0425 PF00205 Thiamine pyrophosphate enzyme, central domain ABC0426 PF01261 Xylose isomerase-like TIM barrel ABC0427 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ABC0427 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ABC0428 PF01116 Fructose-bisphosphate aldolase class-II ABC0429 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ABC0429 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ABC0430 PF00474 Sodium:solute symporter family ABC0431 PF04239 Protein of unknown function (DUF421) ABC0432 PF01053 Cys/Met metabolism PLP-dependent enzyme ABC0434 PF00528 Binding-protein-dependent transport system inner membrane component ABC0435 PF00528 Binding-protein-dependent transport system inner membrane component ABC0436 PF01547 Bacterial extracellular solute-binding protein ABC0437 PF12833 Helix-turn-helix domain ABC0438 PF08240 Alcohol dehydrogenase GroES-like domain ABC0438 PF00107 Zinc-binding dehydrogenase ABC0439 PF03480 Bacterial extracellular solute-binding protein, family 7 ABC0441 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component ABC0442 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus ABC0442 PF08666 SAF domain ABC0443 PF01232 Mannitol dehydrogenase Rossmann domain ABC0443 PF08125 Mannitol dehydrogenase C-terminal domain ABC0444 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ABC0444 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ABC0444 PF00874 PRD domain ABC0444 PF08279 HTH domain ABC0444 PF05043 Mga helix-turn-helix domain ABC0445 PF01116 Fructose-bisphosphate aldolase class-II ABC0446 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ABC0446 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ABC0447 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ABC0448 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ABC0450 PF00392 Bacterial regulatory proteins, gntR family ABC0450 PF00155 Aminotransferase class I and II ABC0451 PF01680 SOR/SNZ family ABC0452 PF01174 SNO glutamine amidotransferase family ABC0453 PF02954 Bacterial regulatory protein, Fis family ABC0453 PF00989 PAS fold ABC0453 PF00158 Sigma-54 interaction domain ABC0456 PF03600 Citrate transporter ABC0457 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABC0457 PF02743 Cache domain ABC0457 PF00672 HAMP domain ABC0466 PF03786 D-mannonate dehydratase (UxuA) ABC0468 PF01970 Tripartite tricarboxylate transporter TctA family ABC0470 PF00171 Aldehyde dehydrogenase family ABC0471 PF00701 Dihydrodipicolinate synthetase family ABC0472 PF07729 FCD domain ABC0472 PF00392 Bacterial regulatory proteins, gntR family ABC0474 PF00535 Glycosyl transferase family 2 ABC0474 PF13181 Tetratricopeptide repeat ABC0476 PF07690 Major Facilitator Superfamily ABC0480 PF00805 Pentapeptide repeats (8 copies) ABC0481 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ABC0482 PF02378 Phosphotransferase system, EIIC ABC0483 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit ABC0484 PF00232 Glycosyl hydrolase family 1 ABC0485 PF00874 PRD domain ABC0485 PF05043 Mga helix-turn-helix domain ABC0485 PF08279 HTH domain ABC0485 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ABC0489 PF01476 LysM domain ABC0489 PF06725 3D domain ABC0491 PF07702 UTRA domain ABC0491 PF00392 Bacterial regulatory proteins, gntR family ABC0492 PF13580 SIS domain ABC0495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABC0495 PF00512 His Kinase A (phospho-acceptor) domain ABC0495 PF00672 HAMP domain ABC0496 PF03413 Peptidase propeptide and YPEB domain ABC0497 PF03413 Peptidase propeptide and YPEB domain ABC0500 PF04055 Radical SAM superfamily ABC0500 PF13186 Iron-sulfur cluster-binding domain ABC0500 PF05402 Coenzyme PQQ synthesis protein D (PqqD) ABC0501 PF04055 Radical SAM superfamily ABC0503 PF08241 Methyltransferase domain ABC0505 PF01980 tRNA-methyltransferase O ABC0505 PF18389 TrmO C-terminal domain ABC0508 PF01370 NAD dependent epimerase/dehydratase family ABC0509 PF13439 Glycosyltransferase Family 4 ABC0509 PF00534 Glycosyl transferases group 1 ABC0512 PF13439 Glycosyltransferase Family 4 ABC0512 PF00534 Glycosyl transferases group 1 ABC0514 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ABC0514 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ABC0514 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ABC0516 PF00535 Glycosyl transferase family 2 ABC0519 PF00004 ATPase family associated with various cellular activities (AAA) ABC0520 PF13472 GDSL-like Lipase/Acylhydrolase family ABC0521 PF01614 Bacterial transcriptional regulator ABC0521 PF09339 IclR helix-turn-helix domain ABC0522 PF00294 pfkB family carbohydrate kinase ABC0524 PF13378 Enolase C-terminal domain-like ABC0524 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ABC0528 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABC0528 PF00512 His Kinase A (phospho-acceptor) domain ABC0528 PF00672 HAMP domain ABC0529 PF00072 Response regulator receiver domain ABC0529 PF00486 Transcriptional regulatory protein, C terminal ABC0532 PF01266 FAD dependent oxidoreductase ABC0534 PF03358 NADPH-dependent FMN reductase ABC0536 PF01487 Type I 3-dehydroquinase ABC0544 PF00474 Sodium:solute symporter family ABC0545 PF02515 CoA-transferase family III ABC0546 PF00392 Bacterial regulatory proteins, gntR family ABC0546 PF07729 FCD domain ABC0547 PF00682 HMGL-like ABC0548 PF07690 Major Facilitator Superfamily ABC0549 PF07687 Peptidase dimerisation domain ABC0549 PF01546 Peptidase family M20/M25/M40 ABC0550 PF03180 NLPA lipoprotein ABC0551 PF00528 Binding-protein-dependent transport system inner membrane component ABC0552 PF09383 NIL domain ABC0552 PF00005 ABC transporter ABC0553 PF07883 Cupin domain ABC0553 PF12833 Helix-turn-helix domain ABC0554 PF04616 Glycosyl hydrolases family 43 ABC0554 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain ABC0555 PF07488 Glycosyl hydrolase family 67 middle domain ABC0555 PF03648 Glycosyl hydrolase family 67 N-terminus ABC0555 PF07477 Glycosyl hydrolase family 67 C-terminus ABC0556 PF00528 Binding-protein-dependent transport system inner membrane component ABC0557 PF00528 Binding-protein-dependent transport system inner membrane component ABC0560 PF00465 Iron-containing alcohol dehydrogenase ABC0562 PF01979 Amidohydrolase family ABC0563 PF01979 Amidohydrolase family ABC0564 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ABC0565 PF00528 Binding-protein-dependent transport system inner membrane component ABC0567 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ABC0567 PF00005 ABC transporter ABC0568 PF00005 ABC transporter ABC0568 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ABC0570 PF07687 Peptidase dimerisation domain ABC0570 PF01546 Peptidase family M20/M25/M40 ABC0571 PF09339 IclR helix-turn-helix domain ABC0571 PF01614 Bacterial transcriptional regulator ABC0572 PF01261 Xylose isomerase-like TIM barrel ABC0573 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ABC0573 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ABC0574 PF01263 Aldose 1-epimerase ABC0575 PF00480 ROK family ABC0577 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ABC0577 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ABC0578 PF13556 PucR C-terminal helix-turn-helix domain ABC0578 PF17853 GGDEF-like domain ABC0578 PF07905 Purine catabolism regulatory protein-like family ABC0583 PF07302 AroM protein ABC0585 PF06779 Uncharacterised MFS-type transporter YbfB ABC0586 PF01361 Tautomerase enzyme ABC0589 PF13193 AMP-binding enzyme C-terminal domain ABC0589 PF00501 AMP-binding enzyme ABC0594 PF03475 3-alpha domain ABC0594 PF03473 MOSC domain ABC0596 PF10055 Uncharacterized small protein (DUF2292) ABC0597 PF03358 NADPH-dependent FMN reductase ABC0598 PF09084 NMT1/THI5 like ABC0599 PF00296 Luciferase-like monooxygenase ABC0600 PF00528 Binding-protein-dependent transport system inner membrane component ABC0601 PF00005 ABC transporter ABC0604 PF07729 FCD domain ABC0604 PF00392 Bacterial regulatory proteins, gntR family ABC0605 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ABC0605 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ABC0608 PF03480 Bacterial extracellular solute-binding protein, family 7 ABC0609 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component ABC0610 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component ABC0611 PF01507 Phosphoadenosine phosphosulfate reductase family ABC0612 PF01747 ATP-sulfurylase ABC0612 PF14306 PUA-like domain ABC0613 PF01384 Phosphate transporter family ABC0615 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ABC0616 PF01903 CbiX ABC0617 PF14824 Sirohaem biosynthesis protein central ABC0618 PF00258 Flavodoxin ABC0618 PF00175 Oxidoreductase NAD-binding domain ABC0618 PF00667 FAD binding domain ABC0619 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ABC0619 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ABC0621 PF00005 ABC transporter ABC0622 PF07702 UTRA domain ABC0622 PF00392 Bacterial regulatory proteins, gntR family ABC0623 PF04303 PrpF protein ABC0627 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABC0627 PF03466 LysR substrate binding domain ABC0628 PF00180 Isocitrate/isopropylmalate dehydrogenase ABC0629 PF00890 FAD binding domain ABC0629 PF14537 Cytochrome c3 ABC0630 PF00107 Zinc-binding dehydrogenase ABC0630 PF08240 Alcohol dehydrogenase GroES-like domain ABC0631 PF03786 D-mannonate dehydratase (UxuA) ABC0632 PF00106 short chain dehydrogenase ABC0633 PF02441 Flavoprotein ABC0635 PF07690 Major Facilitator Superfamily ABC0636 PF01758 Sodium Bile acid symporter family ABC0638 PF02146 Sir2 family ABC0639 PF01797 Transposase IS200 like ABC0640 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ABC0641 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit ABC0642 PF02378 Phosphotransferase system, EIIC ABC0643 PF02056 Family 4 glycosyl hydrolase ABC0643 PF11975 Family 4 glycosyl hydrolase C-terminal domain ABC0644 PF04794 YdjC-like protein ABC0646 PF00704 Glycosyl hydrolases family 18 ABC0646 PF00041 Fibronectin type III domain ABC0648 PF06486 Protein of unknown function (DUF1093) ABC0649 PF07690 Major Facilitator Superfamily ABC0650 PF04055 Radical SAM superfamily ABC0651 PF00266 Aminotransferase class-V ABC0652 PF04199 Putative cyclase ABC0653 PF03301 Tryptophan 2,3-dioxygenase ABC0656 PF05504 Spore germination B3/ GerAC like, C-terminal ABC0657 PF03323 Bacillus/Clostridium GerA spore germination protein ABC0658 PF08220 DeoR-like helix-turn-helix domain ABC0658 PF00455 DeoR C terminal sensor domain ABC0659 PF17042 Nucleotide-binding C-terminal domain ABC0659 PF07005 Sugar-binding N-terminal domain ABC0660 PF04166 Pyridoxal phosphate biosynthetic protein PdxA ABC0661 PF02447 GntP family permease ABC0662 PF00528 Binding-protein-dependent transport system inner membrane component ABC0663 PF00528 Binding-protein-dependent transport system inner membrane component ABC0665 PF03600 Citrate transporter ABC0666 PF00072 Response regulator receiver domain ABC0666 PF12431 Transcriptional regulator ABC0667 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain ABC0667 PF17203 Single cache domain 3 ABC0667 PF00989 PAS fold ABC0667 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABC0668 PF07687 Peptidase dimerisation domain ABC0668 PF01546 Peptidase family M20/M25/M40 ABC0669 PF03070 TENA/THI-4/PQQC family ABC0673 PF10941 Protein of unknown function DUF2620 ABC0674 PF10797 Protein of unknown function ABC0675 PF02126 Phosphotriesterase family ABC0676 PF00155 Aminotransferase class I and II ABC0677 PF01168 Alanine racemase, N-terminal domain ABC0678 PF01676 Metalloenzyme superfamily ABC0680 PF00012 Hsp70 protein ABC0681 PF00106 short chain dehydrogenase ABC0682 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) ABC0682 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 ABC0683 PF00005 ABC transporter ABC0684 PF12833 Helix-turn-helix domain ABC0684 PF02311 AraC-like ligand binding domain ABC0686 PF00528 Binding-protein-dependent transport system inner membrane component ABC0687 PF00528 Binding-protein-dependent transport system inner membrane component ABC0688 PF06013 Proteins of 100 residues with WXG ABC0690 PF10140 WXG100 protein secretion system (Wss), protein YukC ABC0691 PF01580 FtsK/SpoIIIE family ABC0691 PF12538 DNA transporter ABC0703 PF00722 Glycosyl hydrolases family 16 ABC0707 PF00005 ABC transporter ABC0711 PF01418 Helix-turn-helix domain, rpiR family ABC0711 PF01380 SIS domain ABC0712 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase ABC0713 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 ABC0713 PF00367 phosphotransferase system, EIIB ABC0713 PF02378 Phosphotransferase system, EIIC ABC0714 PF07687 Peptidase dimerisation domain ABC0714 PF01546 Peptidase family M20/M25/M40 ABC0715 PF01568 Molydopterin dinucleotide binding domain ABC0715 PF00384 Molybdopterin oxidoreductase ABC0715 PF14710 Respiratory nitrate reductase alpha N-terminal ABC0716 PF13247 4Fe-4S dicluster domain ABC0716 PF14711 Respiratory nitrate reductase beta C-terminal ABC0718 PF02665 Nitrate reductase gamma subunit ABC0720 PF07730 Histidine kinase ABC0720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABC0721 PF00072 Response regulator receiver domain ABC0721 PF00196 Bacterial regulatory proteins, luxR family ABC0722 PF07690 Major Facilitator Superfamily ABC0723 PF14256 YwiC-like protein ABC0725 PF06580 Histidine kinase ABC0725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABC0725 PF00672 HAMP domain ABC0725 PF02743 Cache domain ABC0726 PF12833 Helix-turn-helix domain ABC0726 PF00072 Response regulator receiver domain ABC0727 PF00528 Binding-protein-dependent transport system inner membrane component ABC0728 PF00528 Binding-protein-dependent transport system inner membrane component ABC0730 PF04545 Sigma-70, region 4 ABC0731 PF09335 SNARE associated Golgi protein ABC0732 PF11975 Family 4 glycosyl hydrolase C-terminal domain ABC0732 PF02056 Family 4 glycosyl hydrolase ABC0733 PF12833 Helix-turn-helix domain ABC0733 PF02311 AraC-like ligand binding domain ABC0734 PF00487 Fatty acid desaturase ABC0735 PF07730 Histidine kinase ABC0736 PF00196 Bacterial regulatory proteins, luxR family ABC0736 PF00072 Response regulator receiver domain ABC0737 PF00571 CBS domain ABC0737 PF01769 Divalent cation transporter ABC0737 PF03448 MgtE intracellular N domain ABC0738 PF01047 MarR family ABC0741 PF12897 Alanine-glyoxylate amino-transferase ABC0742 PF00583 Acetyltransferase (GNAT) family ABC0743 PF00557 Metallopeptidase family M24 ABC0744 PF01613 Flavin reductase like domain ABC0745 PF02595 Glycerate kinase family ABC0746 PF17853 GGDEF-like domain ABC0746 PF05651 Putative sugar diacid recognition ABC0746 PF13556 PucR C-terminal helix-turn-helix domain ABC0747 PF13039 Protein of unknown function (DUF3900) ABC0747 PF13037 Domain of unknown function (DUF3898) ABC0749 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ABC0750 PF00107 Zinc-binding dehydrogenase ABC0750 PF08240 Alcohol dehydrogenase GroES-like domain ABC0751 PF02811 PHP domain ABC0752 PF05922 Peptidase inhibitor I9 ABC0752 PF00082 Subtilase family ABC0752 PF13860 FlgD Ig-like domain ABC0752 PF02225 PA domain ABC0755 PF03352 Methyladenine glycosylase ABC0756 PF03070 TENA/THI-4/PQQC family ABC0758 PF03741 Integral membrane protein TerC family ABC0759 PF00561 alpha/beta hydrolase fold ABC0760 PF01926 50S ribosome-binding GTPase ABC0760 PF13167 GTP-binding GTPase N-terminal ABC0760 PF16360 GTP-binding GTPase Middle Region ABC0761 PF05922 Peptidase inhibitor I9 ABC0761 PF00082 Subtilase family ABC0763 PF13539 D-alanyl-D-alanine carboxypeptidase ABC0764 PF00324 Amino acid permease ABC0765 PF00581 Rhodanese-like domain ABC0766 PF13556 PucR C-terminal helix-turn-helix domain ABC0766 PF06018 CodY GAF-like domain ABC0766 PF17853 GGDEF-like domain ABC0767 PF05222 Alanine dehydrogenase/PNT, N-terminal domain ABC0767 PF01262 Alanine dehydrogenase/PNT, C-terminal domain ABC0768 PF10282 Lactonase, 7-bladed beta-propeller ABC0769 PF00892 EamA-like transporter family ABC0770 PF00005 ABC transporter ABC0771 PF00497 Bacterial extracellular solute-binding proteins, family 3 ABC0772 PF00528 Binding-protein-dependent transport system inner membrane component ABC0773 PF00528 Binding-protein-dependent transport system inner membrane component ABC0774 PF00072 Response regulator receiver domain ABC0774 PF08664 YcbB domain ABC0775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABC0776 PF04951 D-aminopeptidase ABC0777 PF00528 Binding-protein-dependent transport system inner membrane component ABC0778 PF12911 N-terminal TM domain of oligopeptide transport permease C ABC0778 PF00528 Binding-protein-dependent transport system inner membrane component ABC0779 PF00005 ABC transporter ABC0779 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ABC0780 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ABC0781 PF02016 LD-carboxypeptidase N-terminal domain ABC0781 PF17676 LD-carboxypeptidase C-terminal domain ABC0782 PF00877 NlpC/P60 family ABC0783 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ABC0783 PF00005 ABC transporter ABC0784 PF01638 HxlR-like helix-turn-helix ABC0786 PF02702 Osmosensitive K+ channel His kinase sensor domain ABC0787 PF13244 Domain of unknown function (DUF4040) ABC0787 PF00361 Proton-conducting membrane transporter ABC0787 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus ABC0788 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter ABC0789 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L ABC0790 PF00361 Proton-conducting membrane transporter ABC0791 PF01899 Na+/H+ ion antiporter subunit ABC0792 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) ABC0793 PF03334 Na+/H+ antiporter subunit ABC0795 PF01261 Xylose isomerase-like TIM barrel ABC0796 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ABC0796 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ABC0798 PF06224 Winged helix DNA-binding domain ABC0799 PF04854 Protein of unknown function, DUF624 ABC0801 PF02557 D-alanyl-D-alanine carboxypeptidase ABC0802 PF00884 Sulfatase ABC0804 PF01694 Rhomboid family ABC0805 PF01648 4'-phosphopantetheinyl transferase superfamily ABC0807 PF01168 Alanine racemase, N-terminal domain ABC0807 PF00842 Alanine racemase, C-terminal domain ABC0808 PF01402 Ribbon-helix-helix protein, copG family ABC0809 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system ABC0810 PF01740 STAS domain ABC0810 PF08678 Rsbr N terminal ABC0811 PF01740 STAS domain ABC0812 PF13581 Histidine kinase-like ATPase domain ABC0813 PF07228 Stage II sporulation protein E (SpoIIE) ABC0813 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain ABC0814 PF01740 STAS domain ABC0815 PF13581 Histidine kinase-like ATPase domain ABC0816 PF04539 Sigma-70 region 3 ABC0816 PF04542 Sigma-70 region 2 ABC0816 PF04545 Sigma-70, region 4 ABC0818 PF17674 HHH domain ABC0818 PF09371 Tex-like protein N-terminal domain ABC0818 PF16921 Tex protein YqgF-like domain ABC0818 PF00575 S1 RNA binding domain ABC0820 PF17283 SprT-like zinc ribbon domain ABC0820 PF10263 SprT-like family ABC0822 PF01555 DNA methylase ABC0822 PF18755 Restriction Enzyme Adenine Methylase Associated ABC0823 PF00872 Transposase, Mutator family ABC0824 PF09346 SMI1 / KNR4 family (SUKH-1) ABC0825 PF07883 Cupin domain ABC0829 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ABC0830 PF00313 'Cold-shock' DNA-binding domain ABC0831 PF02559 CarD-like/TRCF domain ABC0832 PF01022 Bacterial regulatory protein, arsR family ABC0834 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ABC0835 PF01022 Bacterial regulatory protein, arsR family ABC0836 PF02040 Arsenical pump membrane protein ABC0837 PF01451 Low molecular weight phosphotyrosine protein phosphatase ABC0838 PF00190 Cupin ABC0839 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ABC0840 PF07729 FCD domain ABC0840 PF00392 Bacterial regulatory proteins, gntR family ABC0841 PF00180 Isocitrate/isopropylmalate dehydrogenase ABC0844 PF07690 Major Facilitator Superfamily ABC0845 PF00175 Oxidoreductase NAD-binding domain ABC0845 PF00111 2Fe-2S iron-sulfur cluster binding domain ABC0845 PF00970 Oxidoreductase FAD-binding domain ABC0846 PF00005 ABC transporter ABC0846 PF17755 UvrA DNA-binding domain ABC0846 PF17760 UvrA interaction domain ABC0849 PF08818 Domain of unknown function (DU1801) ABC0850 PF05437 Branched-chain amino acid transport protein (AzlD) ABC0851 PF03591 AzlC protein ABC0854 PF13344 Haloacid dehalogenase-like hydrolase ABC0854 PF00293 NUDIX domain ABC0856 PF02567 Phenazine biosynthesis-like protein ABC0857 PF05043 Mga helix-turn-helix domain ABC0857 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ABC0857 PF00874 PRD domain ABC0857 PF08279 HTH domain ABC0858 PF01116 Fructose-bisphosphate aldolase class-II ABC0859 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ABC0859 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ABC0860 PF04439 Streptomycin adenylyltransferase ABC0863 PF02308 MgtC family ABC0864 PF02537 CrcB-like protein, Camphor Resistance (CrcB) ABC0865 PF02537 CrcB-like protein, Camphor Resistance (CrcB) ABC0866 PF01053 Cys/Met metabolism PLP-dependent enzyme ABC0867 PF00586 AIR synthase related protein, N-terminal domain ABC0867 PF02769 AIR synthase related protein, C-terminal domain ABC0868 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE ABC0869 PF00814 Glycoprotease family ABC0870 PF00583 Acetyltransferase (GNAT) family ABC0871 PF00814 Glycoprotease family ABC0872 PF12848 ABC transporter ABC0872 PF16326 ABC transporter C-terminal domain ABC0872 PF00005 ABC transporter ABC0873 PF02629 CoA binding domain ABC0873 PF06971 Putative DNA-binding protein N-terminus ABC0874 PF02416 mttA/Hcf106 family ABC0875 PF00902 Sec-independent protein translocase protein (TatC) ABC0876 PF00005 ABC transporter ABC0876 PF09383 NIL domain ABC0877 PF00528 Binding-protein-dependent transport system inner membrane component ABC0878 PF03180 NLPA lipoprotein ABC0879 PF00465 Iron-containing alcohol dehydrogenase ABC0880 PF02517 CPBP intramembrane metalloprotease ABC0881 PF00166 Chaperonin 10 Kd subunit ABC0882 PF00118 TCP-1/cpn60 chaperonin family ABC0885 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ABC0886 PF03611 PTS system sugar-specific permease component ABC0887 PF13580 SIS domain ABC0888 PF02592 Putative vitamin uptake transporter ABC0889 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain ABC0889 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain ABC0889 PF06827 Zinc finger found in FPG and IleRS ABC0890 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal ABC0890 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal ABC0891 PF01967 MoaC family ABC0892 PF12804 MobA-like NTP transferase domain ABC0893 PF00994 Probable molybdopterin binding domain ABC0894 PF04055 Radical SAM superfamily ABC0894 PF06463 Molybdenum Cofactor Synthesis C ABC0895 PF03453 MoeA N-terminal region (domain I and II) ABC0895 PF03454 MoeA C-terminal region (domain IV) ABC0895 PF00994 Probable molybdopterin binding domain ABC0896 PF03205 Molybdopterin guanine dinucleotide synthesis protein B ABC0897 PF02391 MoaE protein ABC0898 PF02597 ThiS family ABC0899 PF01226 Formate/nitrite transporter ABC0900 PF12838 4Fe-4S dicluster domain ABC0900 PF01568 Molydopterin dinucleotide binding domain ABC0900 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region ABC0900 PF00384 Molybdopterin oxidoreductase ABC0900 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ABC0902 PF02634 FdhD/NarQ family ABC0905 PF09586 Bacterial membrane protein YfhO ABC0907 PF00535 Glycosyl transferase family 2 ABC0911 PF00528 Binding-protein-dependent transport system inner membrane component ABC0912 PF00528 Binding-protein-dependent transport system inner membrane component ABC0913 PF00005 ABC transporter ABC0915 PF00989 PAS fold ABC0915 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain ABC0915 PF17203 Single cache domain 3 ABC0915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABC0916 PF00072 Response regulator receiver domain ABC0917 PF03390 2-hydroxycarboxylate transporter family ABC0918 PF00390 Malic enzyme, N-terminal domain ABC0918 PF03949 Malic enzyme, NAD binding domain ABC0926 PF05105 Bacteriophage holin family ABC0927 PF01520 N-acetylmuramoyl-L-alanine amidase ABC0927 PF05036 Sporulation related domain ABC0928 PF00881 Nitroreductase family ABC0929 PF00905 Penicillin binding protein transpeptidase domain ABC0929 PF03717 Penicillin-binding Protein dimerisation domain ABC0929 PF05223 NTF2-like N-terminal transpeptidase domain ABC0931 PF00149 Calcineurin-like phosphoesterase ABC0933 PF17863 AAA lid domain ABC0933 PF07726 ATPase family associated with various cellular activities (AAA) ABC0934 PF01882 Protein of unknown function DUF58 ABC0935 PF11992 Domain of unknown function (DUF3488) ABC0935 PF13559 Domain of unknown function (DUF4129) ABC0935 PF01841 Transglutaminase-like superfamily ABC0936 PF02540 NAD synthase ABC0936 PF00958 GMP synthase C terminal domain ABC0936 PF00117 Glutamine amidotransferase class-I ABC0939 PF01113 Dihydrodipicolinate reductase, N-terminus ABC0940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABC0940 PF03466 LysR substrate binding domain ABC0943 PF00005 ABC transporter ABC0944 PF02687 FtsX-like permease family ABC0945 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ABC0946 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ABC0947 PF03611 PTS system sugar-specific permease component ABC0948 PF02779 Transketolase, pyrimidine binding domain ABC0948 PF02780 Transketolase, C-terminal domain ABC0948 PF00456 Transketolase, thiamine diphosphate binding domain ABC0949 PF07690 Major Facilitator Superfamily ABC0950 PF01047 MarR family ABC0952 PF02733 Dak1 domain ABC0953 PF02734 DAK2 domain ABC0954 PF03610 PTS system fructose IIA component ABC0955 PF14151 YfhD-like protein ABC0959 PF00860 Permease family ABC0961 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) ABC0962 PF00149 Calcineurin-like phosphoesterase ABC0963 PF01619 Proline dehydrogenase ABC0964 PF02954 Bacterial regulatory protein, Fis family ABC0964 PF00989 PAS fold ABC0964 PF00158 Sigma-54 interaction domain ABC0965 PF00171 Aldehyde dehydrogenase family ABC0966 PF00149 Calcineurin-like phosphoesterase ABC0966 PF02872 5'-nucleotidase, C-terminal domain ABC0967 PF01381 Helix-turn-helix ABC0969 PF00857 Isochorismatase family ABC0970 PF00183 Hsp90 protein ABC0971 PF03806 AbgT putative transporter family ABC0972 PF00067 Cytochrome P450 ABC0974 PF02652 L-lactate permease ABC0975 PF02754 Cysteine-rich domain ABC0976 PF02589 LUD domain ABC0976 PF13183 4Fe-4S dicluster domain ABC0976 PF11870 Domain of unknown function (DUF3390) ABC0977 PF02589 LUD domain ABC0978 PF00392 Bacterial regulatory proteins, gntR family ABC0978 PF07729 FCD domain ABC0979 PF00465 Iron-containing alcohol dehydrogenase ABC0982 PF04069 Substrate binding domain of ABC-type glycine betaine transport system ABC0985 PF04203 Sortase domain ABC0988 PF01048 Phosphorylase superfamily ABC0989 PF02621 Menaquinone biosynthesis ABC0990 PF02417 Chromate transporter ABC0991 PF02417 Chromate transporter ABC0992 PF08220 DeoR-like helix-turn-helix domain ABC0992 PF00455 DeoR C terminal sensor domain ABC0994 PF04962 KduI/IolB family ABC0995 PF02614 Glucuronate isomerase ABC0996 PF13302 Acetyltransferase (GNAT) domain ABC0997 PF07739 TipAS antibiotic-recognition domain ABC0997 PF13411 MerR HTH family regulatory protein ABC0998 PF02797 Chalcone and stilbene synthases, C-terminal domain ABC0998 PF00195 Chalcone and stilbene synthases, N-terminal domain ABC0999 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family ABC1003 PF00664 ABC transporter transmembrane region ABC1003 PF00005 ABC transporter ABC1004 PF00005 ABC transporter ABC1004 PF00664 ABC transporter transmembrane region ABC1006 PF03551 Transcriptional regulator PadR-like family ABC1008 PF12841 YvrJ protein family ABC1009 PF04545 Sigma-70, region 4 ABC1010 PF00999 Sodium/hydrogen exchanger family ABC1011 PF17203 Single cache domain 3 ABC1011 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain ABC1011 PF00989 PAS fold ABC1011 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABC1012 PF00072 Response regulator receiver domain ABC1012 PF08279 HTH domain ABC1012 PF12431 Transcriptional regulator ABC1015 PF01970 Tripartite tricarboxylate transporter TctA family ABC1017 PF02661 Fic/DOC family ABC1024 PF00731 AIR carboxylase ABC1025 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain ABC1025 PF02222 ATP-grasp domain ABC1026 PF10397 Adenylosuccinate lyase C-terminus ABC1026 PF00206 Lyase ABC1027 PF01259 SAICAR synthetase ABC1028 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase ABC1030 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain ABC1030 PF00586 AIR synthase related protein, N-terminal domain ABC1030 PF02769 AIR synthase related protein, C-terminal domain ABC1031 PF00156 Phosphoribosyl transferase domain ABC1032 PF00586 AIR synthase related protein, N-terminal domain ABC1032 PF02769 AIR synthase related protein, C-terminal domain ABC1033 PF00551 Formyl transferase ABC1034 PF02142 MGS-like domain ABC1034 PF01808 AICARFT/IMPCHase bienzyme ABC1035 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain ABC1035 PF02843 Phosphoribosylglycinamide synthetase, C domain ABC1035 PF02844 Phosphoribosylglycinamide synthetase, N domain ABC1036 PF01546 Peptidase family M20/M25/M40 ABC1036 PF07687 Peptidase dimerisation domain ABC1037 PF00356 Bacterial regulatory proteins, lacI family ABC1039 PF00107 Zinc-binding dehydrogenase ABC1039 PF08240 Alcohol dehydrogenase GroES-like domain ABC1040 PF02447 GntP family permease ABC1043 PF13673 Acetyltransferase (GNAT) domain ABC1044 PF07730 Histidine kinase ABC1045 PF00196 Bacterial regulatory proteins, luxR family ABC1045 PF00072 Response regulator receiver domain ABC1046 PF00005 ABC transporter ABC1054 PF18593 CdiI immunity protein ABC1062 PF18593 CdiI immunity protein ABC1070 PF12802 MarR family ABC1071 PF00571 CBS domain ABC1071 PF00005 ABC transporter ABC1072 PF00528 Binding-protein-dependent transport system inner membrane component ABC1073 PF04069 Substrate binding domain of ABC-type glycine betaine transport system ABC1074 PF04055 Radical SAM superfamily ABC1075 PF13382 Adenine deaminase C-terminal domain ABC1075 PF01979 Amidohydrolase family ABC1076 PF01371 Trp repressor protein ABC1077 PF01979 Amidohydrolase family ABC1077 PF13382 Adenine deaminase C-terminal domain ABC1082 PF01032 FecCD transport family ABC1083 PF01032 FecCD transport family ABC1084 PF00005 ABC transporter ABC1085 PF01884 PcrB family ABC1086 PF00580 UvrD/REP helicase N-terminal domain ABC1086 PF13361 UvrD-like helicase C-terminal domain ABC1087 PF12826 Helix-hairpin-helix motif ABC1087 PF03119 NAD-dependent DNA ligase C4 zinc finger domain ABC1087 PF03120 NAD-dependent DNA ligase OB-fold domain ABC1087 PF01653 NAD-dependent DNA ligase adenylation domain ABC1087 PF00533 BRCA1 C Terminus (BRCT) domain ABC1088 PF07537 CamS sex pheromone cAM373 precursor ABC1095 PF05163 DinB family ABC1096 PF02686 Glu-tRNAGln amidotransferase C subunit ABC1097 PF01425 Amidase ABC1098 PF02934 GatB/GatE catalytic domain ABC1098 PF02637 GatB domain ABC1099 PF00781 Diacylglycerol kinase catalytic domain ABC1100 PF00258 Flavodoxin ABC1101 PF05958 tRNA (Uracil-5-)-methyltransferase ABC1101 PF01938 TRAM domain ABC1103 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ABC1106 PF02779 Transketolase, pyrimidine binding domain ABC1106 PF02780 Transketolase, C-terminal domain ABC1106 PF00456 Transketolase, thiamine diphosphate binding domain ABC1108 PF13411 MerR HTH family regulatory protein ABC1109 PF02447 GntP family permease ABC1110 PF00920 Dehydratase family ABC1111 PF01614 Bacterial transcriptional regulator ABC1111 PF09339 IclR helix-turn-helix domain ABC1113 PF00701 Dihydrodipicolinate synthetase family ABC1114 PF00171 Aldehyde dehydrogenase family ABC1115 PF00950 ABC 3 transport family ABC1116 PF00005 ABC transporter ABC1117 PF01297 Zinc-uptake complex component A periplasmic ABC1117 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment ABC1118 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment ABC1119 PF07683 Cobalamin synthesis protein cobW C-terminal domain ABC1119 PF02492 CobW/HypB/UreG, nucleotide-binding domain ABC1120 PF00561 alpha/beta hydrolase fold ABC1121 PF03575 Peptidase family S51 ABC1122 PF01557 Fumarylacetoacetate (FAA) hydrolase family ABC1123 PF12852 Cupin ABC1123 PF12833 Helix-turn-helix domain ABC1124 PF03480 Bacterial extracellular solute-binding protein, family 7 ABC1126 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component ABC1126 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component ABC1128 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus ABC1129 PF02696 Uncharacterized ACR, YdiU/UPF0061 family ABC1130 PF00480 ROK family ABC1132 PF01055 Glycosyl hydrolases family 31 ABC1132 PF13802 Galactose mutarotase-like ABC1133 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABC1133 PF00672 HAMP domain ABC1133 PF02743 Cache domain ABC1133 PF06580 Histidine kinase ABC1134 PF12833 Helix-turn-helix domain ABC1134 PF00072 Response regulator receiver domain ABC1135 PF00528 Binding-protein-dependent transport system inner membrane component ABC1136 PF00528 Binding-protein-dependent transport system inner membrane component ABC1139 PF01370 NAD dependent epimerase/dehydratase family ABC1141 PF00759 Glycosyl hydrolase family 9 ABC1141 PF02018 Carbohydrate binding domain ABC1141 PF02927 Cellulase N-terminal ig-like domain ABC1141 PF07679 Immunoglobulin I-set domain ABC1143 PF17853 GGDEF-like domain ABC1143 PF12833 Helix-turn-helix domain ABC1144 PF13416 Bacterial extracellular solute-binding protein ABC1145 PF00528 Binding-protein-dependent transport system inner membrane component ABC1146 PF00528 Binding-protein-dependent transport system inner membrane component ABC1148 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain ABC1148 PF04616 Glycosyl hydrolases family 43 ABC1149 PF07470 Glycosyl Hydrolase Family 88 ABC1151 PF04854 Protein of unknown function, DUF624 ABC1152 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ABC1152 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ABC1153 PF08666 SAF domain ABC1153 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus ABC1154 PF01232 Mannitol dehydrogenase Rossmann domain ABC1154 PF08125 Mannitol dehydrogenase C-terminal domain ABC1155 PF13936 Helix-turn-helix domain ABC1155 PF04198 Putative sugar-binding domain ABC1157 PF03608 PTS system enzyme II sorbitol-specific factor ABC1158 PF03612 Sorbitol phosphotransferase enzyme II N-terminus ABC1158 PF07663 Sorbitol phosphotransferase enzyme II C-terminus ABC1159 PF03829 PTS system glucitol/sorbitol-specific IIA component ABC1160 PF00106 short chain dehydrogenase ABC1161 PF18416 N-acetylglucosamine binding protein domain 2 ABC1161 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading ABC1163 PF00872 Transposase, Mutator family ABC1164 PF04203 Sortase domain ABC1167 PF00356 Bacterial regulatory proteins, lacI family ABC1169 PF00486 Transcriptional regulatory protein, C terminal ABC1169 PF00072 Response regulator receiver domain ABC1170 PF00512 His Kinase A (phospho-acceptor) domain ABC1170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABC1171 PF00005 ABC transporter ABC1173 PF01613 Flavin reductase like domain ABC1175 PF07943 Penicillin-binding protein 5, C-terminal domain ABC1175 PF00768 D-alanyl-D-alanine carboxypeptidase ABC1176 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABC1176 PF00512 His Kinase A (phospho-acceptor) domain ABC1177 PF00486 Transcriptional regulatory protein, C terminal ABC1177 PF00072 Response regulator receiver domain ABC1178 PF00491 Arginase family ABC1180 PF01566 Natural resistance-associated macrophage protein ABC1181 PF00291 Pyridoxal-phosphate dependent enzyme ABC1182 PF02423 Ornithine cyclodeaminase/mu-crystallin family ABC1183 PF07875 Coat F domain ABC1184 PF00324 Amino acid permease ABC1185 PF01810 LysE type translocator ABC1186 PF05067 Manganese containing catalase ABC1199 PF04134 Protein of unknown function, DUF393 ABC1200 PF12867 DinB superfamily ABC1201 PF00392 Bacterial regulatory proteins, gntR family ABC1201 PF00155 Aminotransferase class I and II ABC1202 PF01810 LysE type translocator ABC1203 PF01037 Lrp/AsnC ligand binding domain ABC1205 PF00872 Transposase, Mutator family ABC1206 PF00512 His Kinase A (phospho-acceptor) domain ABC1206 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABC1207 PF00486 Transcriptional regulatory protein, C terminal ABC1207 PF00072 Response regulator receiver domain ABC1210 PF00005 ABC transporter ABC1212 PF07944 Beta-L-arabinofuranosidase, GH127 ABC1214 PF00528 Binding-protein-dependent transport system inner membrane component ABC1215 PF00528 Binding-protein-dependent transport system inner membrane component ABC1216 PF13302 Acetyltransferase (GNAT) domain ABC1217 PF01381 Helix-turn-helix ABC1218 PF10776 Protein of unknown function (DUF2600) ABC1219 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ABC1220 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABC1220 PF03466 LysR substrate binding domain ABC1221 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ABC1222 PF01758 Sodium Bile acid symporter family ABC1223 PF02913 FAD linked oxidases, C-terminal domain ABC1223 PF01565 FAD binding domain ABC1224 PF00512 His Kinase A (phospho-acceptor) domain ABC1224 PF00989 PAS fold ABC1224 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABC1224 PF13188 PAS domain ABC1224 PF13426 PAS domain ABC1225 PF04073 Aminoacyl-tRNA editing domain ABC1227 PF00528 Binding-protein-dependent transport system inner membrane component ABC1228 PF00528 Binding-protein-dependent transport system inner membrane component ABC1229 PF17850 CysA C-terminal regulatory domain ABC1229 PF12857 TOBE-like domain ABC1229 PF00005 ABC transporter ABC1231 PF00005 ABC transporter ABC1231 PF09383 NIL domain ABC1232 PF02653 Branched-chain amino acid transport system / permease component ABC1234 PF04143 Sulphur transport ABC1235 PF13302 Acetyltransferase (GNAT) domain ABC1238 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ABC1238 PF00005 ABC transporter ABC1239 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ABC1239 PF00005 ABC transporter ABC1240 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ABC1247 PF03807 NADP oxidoreductase coenzyme F420-dependent ABC1247 PF14748 Pyrroline-5-carboxylate reductase dimerisation ABC1248 PF00528 Binding-protein-dependent transport system inner membrane component ABC1249 PF00528 Binding-protein-dependent transport system inner membrane component ABC1250 PF00005 ABC transporter ABC1252 PF13538 UvrD-like helicase C-terminal domain ABC1253 PF00664 ABC transporter transmembrane region ABC1253 PF00005 ABC transporter ABC1254 PF00005 ABC transporter ABC1254 PF00664 ABC transporter transmembrane region ABC1255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABC1255 PF00512 His Kinase A (phospho-acceptor) domain ABC1256 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ABC1256 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ABC1257 PF16901 C-terminal domain of alpha-glycerophosphate oxidase ABC1257 PF01266 FAD dependent oxidoreductase ABC1258 PF04309 Glycerol-3-phosphate responsive antiterminator ABC1259 PF01235 Sodium:alanine symporter family ABC1260 PF01943 Polysaccharide biosynthesis protein ABC1261 PF02638 Glycosyl hydrolase-like 10 ABC1263 PF00367 phosphotransferase system, EIIB ABC1263 PF02378 Phosphotransferase system, EIIC ABC1264 PF00128 Alpha amylase, catalytic domain ABC1264 PF16657 Maltogenic Amylase, C-terminal domain ABC1265 PF07702 UTRA domain ABC1265 PF00392 Bacterial regulatory proteins, gntR family ABC1266 PF00255 Glutathione peroxidase ABC1267 PF02898 Nitric oxide synthase, oxygenase domain ABC1268 PF12848 ABC transporter ABC1268 PF00005 ABC transporter ABC1268 PF16326 ABC transporter C-terminal domain ABC1269 PF08220 DeoR-like helix-turn-helix domain ABC1269 PF00455 DeoR C terminal sensor domain ABC1270 PF00294 pfkB family carbohydrate kinase ABC1271 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ABC1271 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ABC1273 PF00209 Sodium:neurotransmitter symporter family ABC1275 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin ABC1275 PF18277 AbrB C-terminal domain ABC1278 PF01693 Caulimovirus viroplasmin ABC1279 PF00171 Aldehyde dehydrogenase family ABC1280 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) ABC1281 PF01797 Transposase IS200 like ABC1283 PF00199 Catalase ABC1283 PF06628 Catalase-related immune-responsive ABC1284 PF08439 Oligopeptidase F ABC1284 PF01432 Peptidase family M3 ABC1286 PF02322 Cytochrome bd terminal oxidase subunit II ABC1287 PF01654 Cytochrome bd terminal oxidase subunit I ABC1291 PF14167 YfkD-like protein ABC1292 PF08756 YfkB-like domain ABC1292 PF04055 Radical SAM superfamily ABC1293 PF00300 Histidine phosphatase superfamily (branch 1) ABC1294 PF00571 CBS domain ABC1294 PF03471 Transporter associated domain ABC1294 PF01595 Cyclin M transmembrane N-terminal domain ABC1296 PF01522 Polysaccharide deacetylase ABC1297 PF01134 Glucose inhibited division protein A ABC1297 PF13932 GidA associated domain ABC1300 PF05958 tRNA (Uracil-5-)-methyltransferase ABC1300 PF01938 TRAM domain ABC1301 PF02016 LD-carboxypeptidase N-terminal domain ABC1301 PF17676 LD-carboxypeptidase C-terminal domain ABC1303 PF08338 Domain of unknown function (DUF1731) ABC1303 PF01370 NAD dependent epimerase/dehydratase family ABC1304 PF02631 RecX family ABC1305 PF08838 Protein of unknown function (DUF1811) ABC1307 PF08176 Small acid-soluble spore protein K family ABC1308 PF04307 LexA-binding, inner membrane-associated putative hydrolase ABC1309 PF00633 Helix-hairpin-helix motif ABC1309 PF00730 HhH-GPD superfamily base excision DNA repair protein ABC1309 PF14815 NUDIX domain ABC1315 PF04167 Protein of unknown function (DUF402) ABC1316 PF00664 ABC transporter transmembrane region ABC1316 PF00005 ABC transporter ABC1317 PF06081 Aromatic acid exporter family member 1 ABC1318 PF00202 Aminotransferase class-III ABC1319 PF00578 AhpC/TSA family ABC1320 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ABC1322 PF01475 Ferric uptake regulator family ABC1323 PF11023 Zinc-ribbon containing domain ABC1324 PF12708 Pectate lyase superfamily protein ABC1324 PF11962 Peptidase_G2, IMC autoproteolytic cleavage domain ABC1325 PF02899 Phage integrase, N-terminal SAM-like domain ABC1325 PF00589 Phage integrase family ABC1341 PF01464 Transglycosylase SLT domain ABC1343 PF11962 Peptidase_G2, IMC autoproteolytic cleavage domain ABC1343 PF12708 Pectate lyase superfamily protein ABC1350 PF05105 Bacteriophage holin family ABC1351 PF01471 Putative peptidoglycan binding domain ABC1351 PF01510 N-acetylmuramoyl-L-alanine amidase ABC1351 PF01476 LysM domain ABC1382 PF07690 Major Facilitator Superfamily ABC1383 PF01494 FAD binding domain ABC1385 PF01047 MarR family ABC1386 PF00005 ABC transporter ABC1387 PF06441 Epoxide hydrolase N terminus ABC1389 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ABC1389 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABC1391 PF02082 Transcriptional regulator ABC1392 PF07690 Major Facilitator Superfamily ABC1395 PF07739 TipAS antibiotic-recognition domain ABC1395 PF13411 MerR HTH family regulatory protein ABC1396 PF11954 Domain of unknown function (DUF3471) ABC1396 PF00144 Beta-lactamase ABC1402 PF00872 Transposase, Mutator family ABC1405 PF02449 Beta-galactosidase ABC1405 PF08533 Beta-galactosidase C-terminal domain ABC1405 PF08532 Beta-galactosidase trimerisation domain ABC1407 PF01979 Amidohydrolase family ABC1413 PF03841 L-seryl-tRNA selenium transferase ABC1414 PF07071 KDGP aldolase ABC1415 PF00248 Aldo/keto reductase family ABC1422 PF12146 Serine aminopeptidase, S33 ABC1423 PF00440 Bacterial regulatory proteins, tetR family ABC1423 PF08360 QacR-like protein, C-terminal region ABC1424 PF01494 FAD binding domain ABC1427 PF01638 HxlR-like helix-turn-helix ABC1428 PF02403 Seryl-tRNA synthetase N-terminal domain ABC1428 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ABC1430 PF02463 RecF/RecN/SMC N terminal domain ABC1432 PF07730 Histidine kinase ABC1433 PF00072 Response regulator receiver domain ABC1433 PF00196 Bacterial regulatory proteins, luxR family ABC1434 PF00005 ABC transporter ABC1437 PF01501 Glycosyl transferase family 8 ABC1437 PF08437 Glycosyl transferase family 8 C-terminal ABC1438 PF04525 LURP-one-related ABC1440 PF03009 Glycerophosphoryl diester phosphodiesterase family ABC1443 PF00156 Phosphoribosyl transferase domain ABC1445 PF00149 Calcineurin-like phosphoesterase ABC1445 PF02872 5'-nucleotidase, C-terminal domain ABC1447 PF02810 SEC-C motif ABC1447 PF05225 helix-turn-helix, Psq domain ABC1448 PF00939 Sodium:sulfate symporter transmembrane region ABC1449 PF01717 Cobalamin-independent synthase, Catalytic domain ABC1449 PF08267 Cobalamin-independent synthase, N-terminal domain ABC1450 PF02554 Carbon starvation protein CstA ABC1450 PF13722 5TM C-terminal transporter carbon starvation CstA ABC1452 PF00171 Aldehyde dehydrogenase family ABC1453 PF00367 phosphotransferase system, EIIB ABC1453 PF02378 Phosphotransferase system, EIIC ABC1454 PF14310 Fibronectin type III-like domain ABC1454 PF00933 Glycosyl hydrolase family 3 N terminal domain ABC1454 PF01915 Glycosyl hydrolase family 3 C-terminal domain ABC1455 PF08244 Glycosyl hydrolases family 32 C terminal ABC1455 PF00251 Glycosyl hydrolases family 32 N-terminal domain ABC1456 PF12833 Helix-turn-helix domain ABC1456 PF02311 AraC-like ligand binding domain ABC1458 PF00005 ABC transporter ABC1460 PF00392 Bacterial regulatory proteins, gntR family ABC1461 PF00005 ABC transporter ABC1463 PF05343 M42 glutamyl aminopeptidase ABC1464 PF00210 Ferritin-like domain ABC1466 PF08331 Domain of unknown function (DUF1730) ABC1467 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain ABC1467 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ABC1469 PF12671 Putative amidase domain ABC1470 PF00588 SpoU rRNA Methylase family ABC1471 PF17328 Family of unknown function (DUF5366) ABC1473 PF00905 Penicillin binding protein transpeptidase domain ABC1473 PF00912 Transglycosylase ABC1474 PF08298 PrkA AAA domain ABC1474 PF06798 PrkA serine protein kinase C-terminal domain ABC1475 PF10502 Signal peptidase, peptidase S26 ABC1476 PF00005 ABC transporter ABC1477 PF04285 Protein of unknown function (DUF444) ABC1479 PF07690 Major Facilitator Superfamily ABC1480 PF00005 ABC transporter ABC1480 PF13732 Domain of unknown function (DUF4162) ABC1481 PF01061 ABC-2 type transporter ABC1486 PF07702 UTRA domain ABC1486 PF00392 Bacterial regulatory proteins, gntR family ABC1487 PF00206 Lyase ABC1487 PF14698 Argininosuccinate lyase C-terminal ABC1489 PF01979 Amidohydrolase family ABC1490 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase ABC1491 PF00881 Nitroreductase family ABC1492 PF00155 Aminotransferase class I and II ABC1493 PF01557 Fumarylacetoacetate (FAA) hydrolase family ABC1494 PF03009 Glycerophosphoryl diester phosphodiesterase family ABC1495 PF00534 Glycosyl transferases group 1 ABC1496 PF00583 Acetyltransferase (GNAT) family ABC1496 PF00795 Carbon-nitrogen hydrolase ABC1497 PF03749 Sugar fermentation stimulation protein RE domain ABC1497 PF17746 SfsA N-terminal OB domain ABC1498 PF16901 C-terminal domain of alpha-glycerophosphate oxidase ABC1498 PF01266 FAD dependent oxidoreductase ABC1499 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain ABC1499 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III ABC1499 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II ABC1499 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I ABC1500 PF04293 SpoVR like protein ABC1501 PF00664 ABC transporter transmembrane region ABC1501 PF00005 ABC transporter ABC1502 PF00005 ABC transporter ABC1502 PF00664 ABC transporter transmembrane region ABC1503 PF00155 Aminotransferase class I and II ABC1504 PF01435 Peptidase family M48 ABC1505 PF04011 LemA family ABC1506 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABC1506 PF02770 Acyl-CoA dehydrogenase, middle domain ABC1506 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABC1507 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ABC1507 PF00289 Biotin carboxylase, N-terminal domain ABC1507 PF02785 Biotin carboxylase C-terminal domain ABC1508 PF00364 Biotin-requiring enzyme ABC1509 PF00378 Enoyl-CoA hydratase/isomerase ABC1510 PF01039 Carboxyl transferase domain ABC1514 PF03459 TOBE domain ABC1514 PF00005 ABC transporter ABC1514 PF17912 MalK OB fold domain ABC1515 PF13556 PucR C-terminal helix-turn-helix domain ABC1518 PF04286 Protein of unknown function (DUF445) ABC1519 PF06133 Control of competence regulator ComK, YlbF/YmcA ABC1523 PF00486 Transcriptional regulatory protein, C terminal ABC1523 PF00072 Response regulator receiver domain ABC1524 PF00512 His Kinase A (phospho-acceptor) domain ABC1524 PF00672 HAMP domain ABC1524 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABC1525 PF01966 HD domain ABC1529 PF01047 MarR family ABC1531 PF00266 Aminotransferase class-V ABC1532 PF01230 HIT domain ABC1533 PF00005 ABC transporter ABC1534 PF05975 Bacterial ABC transporter protein EcsB ABC1535 PF12787 EcsC protein family ABC1536 PF02683 Cytochrome C biogenesis protein transmembrane region ABC1537 PF00912 Transglycosylase ABC1537 PF00905 Penicillin binding protein transpeptidase domain ABC1538 PF01208 Uroporphyrinogen decarboxylase (URO-D) ABC1541 PF14682 Sporulation initiation phospho-transferase B, C-terminal ABC1541 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain ABC1542 PF01926 50S ribosome-binding GTPase ABC1542 PF01018 GTP1/OBG ABC1542 PF09269 Domain of unknown function (DUF1967) ABC1543 PF01842 ACT domain ABC1544 PF01842 ACT domain ABC1544 PF00800 Prephenate dehydratase ABC1545 PF02829 3H domain ABC1545 PF08279 HTH domain ABC1546 PF00266 Aminotransferase class-V ABC1547 PF00890 FAD binding domain ABC1547 PF02910 Fumarate reductase flavoprotein C-term ABC1548 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain ABC1548 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain ABC1549 PF02445 Quinolinate synthetase A protein ABC1550 PF01476 LysM domain ABC1553 PF08955 BofC C-terminal domain ABC1553 PF08977 Bypass of Forespore C, N terminal ABC1554 PF01330 RuvA N terminal domain ABC1554 PF07499 RuvA, C-terminal domain ABC1555 PF05496 Holliday junction DNA helicase RuvB P-loop domain ABC1555 PF17864 RuvB AAA lid domain ABC1555 PF05491 RuvB C-terminal winged helix domain ABC1556 PF11146 Protein of unknown function (DUF2905) ABC1557 PF02547 Queuosine biosynthesis protein ABC1558 PF01702 Queuine tRNA-ribosyltransferase ABC1559 PF02699 Preprotein translocase subunit ABC1560 PF12670 Protein of unknown function (DUF3792) ABC1563 PF01943 Polysaccharide biosynthesis protein ABC1563 PF14667 Polysaccharide biosynthesis C-terminal domain ABC1565 PF07549 SecD/SecF GG Motif ABC1565 PF02355 Protein export membrane protein ABC1566 PF02355 Protein export membrane protein ABC1566 PF07549 SecD/SecF GG Motif ABC1567 PF06305 Lipopolysaccharide assembly protein A domain ABC1568 PF02272 DHHA1 domain ABC1568 PF17768 RecJ OB domain ABC1568 PF01368 DHH family ABC1568 PF10141 Single-strand DNA-specific exonuclease, C terminal domain ABC1569 PF00156 Phosphoribosyl transferase domain ABC1570 PF02824 TGS domain ABC1570 PF04607 Region found in RelA / SpoT proteins ABC1570 PF13291 ACT domain ABC1571 PF02580 D-Tyr-tRNA(Tyr) deacylase ABC1572 PF00356 Bacterial regulatory proteins, lacI family ABC1574 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ABC1574 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ABC1575 PF00144 Beta-lactamase ABC1576 PF03129 Anticodon binding domain ABC1576 PF13393 Histidyl-tRNA synthetase ABC1577 PF01336 OB-fold nucleic acid binding domain ABC1577 PF00152 tRNA synthetases class II (D, K and N) ABC1577 PF02938 GAD domain ABC1578 PF03447 Homoserine dehydrogenase, NAD binding domain ABC1578 PF00742 Homoserine dehydrogenase ABC1580 PF01717 Cobalamin-independent synthase, Catalytic domain ABC1581 PF00899 ThiF family ABC1583 PF16193 AAA C-terminal domain ABC1583 PF05496 Holliday junction DNA helicase RuvB P-loop domain ABC1583 PF12002 MgsA AAA+ ATPase C terminal ABC1584 PF02082 Transcriptional regulator ABC1585 PF00266 Aminotransferase class-V ABC1588 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain ABC1588 PF13538 UvrD-like helicase C-terminal domain ABC1588 PF14490 Helix-hairpin-helix containing domain ABC1589 PF05239 PRC-barrel domain ABC1591 PF01594 AI-2E family transporter ABC1592 PF02272 DHHA1 domain ABC1592 PF01411 tRNA synthetases class II (A) ABC1592 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ABC1593 PF06135 IreB regulatory phosphoprotein ABC1594 PF03652 Holliday junction resolvase ABC1595 PF06949 Protein of unknown function (DUF1292) ABC1596 PF02618 YceG-like family ABC1598 PF00485 Phosphoribulokinase / Uridine kinase family ABC1599 PF01272 Transcription elongation factor, GreA/GreB, C-term ABC1599 PF03449 Transcription elongation factor, N-terminal ABC1601 PF01068 ATP dependent DNA ligase domain ABC1602 PF02735 Ku70/Ku80 beta-barrel domain ABC1603 PF01048 Phosphorylase superfamily ABC1605 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ABC1606 PF00005 ABC transporter ABC1606 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ABC1607 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ABC1607 PF00005 ABC transporter ABC1608 PF00528 Binding-protein-dependent transport system inner membrane component ABC1608 PF12911 N-terminal TM domain of oligopeptide transport permease C ABC1609 PF00528 Binding-protein-dependent transport system inner membrane component ABC1610 PF00440 Bacterial regulatory proteins, tetR family ABC1610 PF08359 YsiA-like protein, C-terminal region ABC1611 PF00128 Alpha amylase, catalytic domain ABC1613 PF10437 Bacterial lipoate protein ligase C-terminus ABC1613 PF03099 Biotin/lipoate A/B protein ligase family ABC1614 PF03606 C4-dicarboxylate anaerobic carrier ABC1616 PF01758 Sodium Bile acid symporter family ABC1617 PF04545 Sigma-70, region 4 ABC1617 PF04542 Sigma-70 region 2 ABC1620 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases ABC1621 PF04324 BFD-like [2Fe-2S] binding domain ABC1621 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ABC1621 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ABC1621 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABC1621 PF18267 Rubredoxin NAD+ reductase C-terminal domain ABC1622 PF00355 Rieske [2Fe-2S] domain ABC1623 PF04324 BFD-like [2Fe-2S] binding domain ABC1623 PF01077 Nitrite and sulphite reductase 4Fe-4S domain ABC1623 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain ABC1623 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABC1623 PF18267 Rubredoxin NAD+ reductase C-terminal domain ABC1624 PF04879 Molybdopterin oxidoreductase Fe4S4 domain ABC1624 PF01568 Molydopterin dinucleotide binding domain ABC1624 PF00384 Molybdopterin oxidoreductase ABC1625 PF07690 Major Facilitator Superfamily ABC1626 PF02028 BCCT, betaine/carnitine/choline family transporter ABC1627 PF08543 Phosphomethylpyrimidine kinase ABC1628 PF00216 Bacterial DNA-binding protein ABC1637 PF01926 50S ribosome-binding GTPase ABC1638 PF08501 Shikimate dehydrogenase substrate binding domain ABC1638 PF01488 Shikimate / quinate 5-dehydrogenase ABC1638 PF18317 Shikimate 5'-dehydrogenase C-terminal domain ABC1639 PF01985 CRS1 / YhbY (CRM) domain ABC1640 PF01467 Cytidylyltransferase-like ABC1641 PF01966 HD domain ABC1643 PF17783 CvfB-like winged helix domain ABC1643 PF13509 S1 domain ABC1644 PF13649 Methyltransferase domain ABC1645 PF14748 Pyrroline-5-carboxylate reductase dimerisation ABC1645 PF03807 NADP oxidoreductase coenzyme F420-dependent ABC1646 PF10531 SLBB domain ABC1647 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ABC1648 PF03772 Competence protein ABC1648 PF13567 Domain of unknown function (DUF4131) ABC1648 PF00753 Metallo-beta-lactamase superfamily ABC1650 PF06144 DNA polymerase III, delta subunit ABC1651 PF01649 Ribosomal protein S20 ABC1652 PF03418 Germination protease ABC1653 PF07454 Stage II sporulation protein P (SpoIIP) ABC1655 PF06421 GTP-binding protein LepA C-terminus ABC1655 PF00009 Elongation factor Tu GTP binding domain ABC1655 PF03144 Elongation factor Tu domain 2 ABC1655 PF00679 Elongation factor G C-terminus ABC1656 PF04055 Radical SAM superfamily ABC1656 PF06969 HemN C-terminal domain ABC1657 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding ABC1657 PF01628 HrcA protein C terminal domain ABC1658 PF01025 GrpE ABC1659 PF00012 Hsp70 protein ABC1660 PF01556 DnaJ C terminal domain ABC1660 PF00684 DnaJ central domain ABC1660 PF00226 DnaJ domain ABC1662 PF04452 RNA methyltransferase ABC1663 PF00919 Uncharacterized protein family UPF0004 ABC1663 PF01938 TRAM domain ABC1663 PF04055 Radical SAM superfamily ABC1664 PF01209 ubiE/COQ5 methyltransferase family ABC1665 PF00375 Sodium:dicarboxylate symporter family ABC1666 PF01791 DeoC/LacD family aldolase ABC1667 PF00248 Aldo/keto reductase family ABC1668 PF02690 Na+/Pi-cotransporter ABC1669 PF01165 Ribosomal protein S21 ABC1670 PF09424 Yqey-like protein ABC1671 PF01957 NfeD-like C-terminal, partner-binding ABC1671 PF01972 Serine dehydrogenase proteinase ABC1672 PF12127 SigmaW regulon antibacterial ABC1674 PF07873 YabP family ABC1675 PF06898 Putative stage IV sporulation protein YqfD ABC1676 PF02562 PhoH-like protein ABC1677 PF07698 7TM receptor with intracellular HD hydrolase ABC1677 PF01966 HD domain ABC1677 PF07697 7TM-HD extracellular ABC1678 PF02130 Uncharacterized protein family UPF0054 ABC1679 PF01219 Prokaryotic diacylglycerol kinase ABC1680 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ABC1681 PF01926 50S ribosome-binding GTPase ABC1681 PF07650 KH domain ABC1682 PF14006 YqzL-like protein ABC1683 PF02565 Recombination protein O C terminal ABC1683 PF11967 Recombination protein O N terminal ABC1684 PF02091 Glycyl-tRNA synthetase alpha subunit ABC1685 PF05746 DALR anticodon binding domain ABC1685 PF02092 Glycyl-tRNA synthetase beta subunit ABC1686 PF00571 CBS domain ABC1686 PF08279 HTH domain ABC1687 PF03618 Kinase/pyrophosphorylase ABC1688 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 ABC1689 PF10410 DnaB-helicase binding domain of primase ABC1689 PF08275 DNA primase catalytic core, N-terminal domain ABC1689 PF01807 CHC2 zinc finger ABC1690 PF04539 Sigma-70 region 3 ABC1690 PF03979 Sigma-70 factor, region 1.1 ABC1690 PF00140 Sigma-70 factor, region 1.2 ABC1690 PF04542 Sigma-70 region 2 ABC1690 PF04545 Sigma-70, region 4 ABC1691 PF13442 Cytochrome C oxidase, cbb3-type, subunit III ABC1692 PF04816 tRNA (adenine(22)-N(1))-methyltransferase ABC1693 PF01784 NIF3 (NGG1p interacting factor 3) ABC1694 PF02401 LytB protein ABC1695 PF02559 CarD-like/TRCF domain ABC1697 PF00270 DEAD/DEAH box helicase ABC1697 PF00271 Helicase conserved C-terminal domain ABC1698 PF01261 Xylose isomerase-like TIM barrel ABC1700 PF13426 PAS domain ABC1700 PF00512 His Kinase A (phospho-acceptor) domain ABC1700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABC1700 PF13188 PAS domain ABC1700 PF00989 PAS fold ABC1702 PF00005 ABC transporter ABC1703 PF00950 ABC 3 transport family ABC1704 PF01475 Ferric uptake regulator family ABC1708 PF04551 GcpE protein ABC1710 PF07690 Major Facilitator Superfamily ABC1711 PF06207 Protein of unknown function (DUF1002) ABC1714 PF01895 PhoU domain ABC1715 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain ABC1715 PF02777 Iron/manganese superoxide dismutases, C-terminal domain ABC1716 PF07690 Major Facilitator Superfamily ABC1721 PF00471 Ribosomal protein L33 ABC1722 PF01812 5-formyltetrahydrofolate cyclo-ligase family ABC1724 PF00899 ThiF family ABC1726 PF01694 Rhomboid family ABC1727 PF03323 Bacillus/Clostridium GerA spore germination protein ABC1731 PF00480 ROK family ABC1732 PF00206 Lyase ABC1732 PF10415 Fumarase C C-terminus ABC1733 PF02581 Thiamine monophosphate synthase ABC1735 PF05690 Thiazole biosynthesis protein ThiG ABC1736 PF01266 FAD dependent oxidoreductase ABC1737 PF08543 Phosphomethylpyrimidine kinase ABC1737 PF02581 Thiamine monophosphate synthase ABC1739 PF01910 Thiamine-binding protein ABC1740 PF13673 Acetyltransferase (GNAT) domain ABC1742 PF00756 Putative esterase ABC1744 PF01381 Helix-turn-helix ABC1745 PF08671 Anti-repressor SinI ABC1745 PF01381 Helix-turn-helix ABC1746 PF00206 Lyase ABC1746 PF10415 Fumarase C C-terminus ABC1747 PF01641 SelR domain ABC1748 PF01625 Peptide methionine sulfoxide reductase ABC1749 PF00512 His Kinase A (phospho-acceptor) domain ABC1749 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABC1749 PF00989 PAS fold ABC1750 PF06081 Aromatic acid exporter family member 1 ABC1750 PF11728 Putative aromatic acid exporter C-terminal domain ABC1751 PF03734 L,D-transpeptidase catalytic domain ABC1753 PF07687 Peptidase dimerisation domain ABC1753 PF01546 Peptidase family M20/M25/M40 ABC1754 PF03885 Protein of unknown function (DUF327) ABC1758 PF00082 Subtilase family ABC1759 PF04748 Divergent polysaccharide deacetylase ABC1760 PF13411 MerR HTH family regulatory protein ABC1763 PF13840 ACT domain ABC1763 PF00696 Amino acid kinase family ABC1765 PF14748 Pyrroline-5-carboxylate reductase dimerisation ABC1765 PF03807 NADP oxidoreductase coenzyme F420-dependent ABC1766 PF00171 Aldehyde dehydrogenase family ABC1767 PF00696 Amino acid kinase family ABC1767 PF01472 PUA domain ABC1768 PF13537 Glutamine amidotransferase domain ABC1768 PF00733 Asparagine synthase ABC1772 PF12802 MarR family ABC1773 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 ABC1775 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain ABC1776 PF02673 Bacitracin resistance protein BacA ABC1777 PF00578 AhpC/TSA family ABC1778 PF00293 NUDIX domain ABC1779 PF01944 Stage II sporulation protein M ABC1780 PF01475 Ferric uptake regulator family ABC1781 PF14004 Protein of unknown function (DUF4227) ABC1782 PF02899 Phage integrase, N-terminal SAM-like domain ABC1782 PF00589 Phage integrase family ABC1783 PF01676 Metalloenzyme superfamily ABC1784 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain ABC1784 PF02885 Glycosyl transferase family, helical bundle domain ABC1784 PF00591 Glycosyl transferase family, a/b domain ABC1785 PF02566 OsmC-like protein ABC1787 PF07690 Major Facilitator Superfamily ABC1790 PF04307 LexA-binding, inner membrane-associated putative hydrolase ABC1791 PF11738 Protein of unknown function (DUF3298) ABC1791 PF01522 Polysaccharide deacetylase ABC1791 PF13739 Deacetylase PdaC ABC1792 PF00768 D-alanyl-D-alanine carboxypeptidase ABC1792 PF07943 Penicillin-binding protein 5, C-terminal domain ABC1793 PF01740 STAS domain ABC1794 PF13581 Histidine kinase-like ATPase domain ABC1795 PF04545 Sigma-70, region 4 ABC1795 PF04542 Sigma-70 region 2 ABC1795 PF04539 Sigma-70 region 3 ABC1796 PF03862 SpoVAC/SpoVAEB sporulation membrane protein ABC1797 PF07451 Stage V sporulation protein AD (SpoVAD) ABC1798 PF03862 SpoVAC/SpoVAEB sporulation membrane protein ABC1799 PF14097 Stage V sporulation protein AE1 ABC1800 PF03323 Bacillus/Clostridium GerA spore germination protein ABC1801 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain ABC1801 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain ABC1802 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD ABC1803 PF03466 LysR substrate binding domain ABC1803 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABC1805 PF00285 Citrate synthase, C-terminal domain ABC1806 PF03972 MmgE/PrpD family ABC1808 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ABC1808 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ABC1809 PF00171 Aldehyde dehydrogenase family ABC1810 PF00378 Enoyl-CoA hydratase/isomerase ABC1811 PF00677 Lumazine binding domain ABC1812 PF00925 GTP cyclohydrolase II ABC1812 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase ABC1813 PF00885 6,7-dimethyl-8-ribityllumazine synthase ABC1814 PF03745 Domain of unknown function (DUF309) ABC1815 PF02616 Segregation and condensation protein ScpA ABC1816 PF04079 Segregation and condensation complex subunit ScpB ABC1818 PF00171 Aldehyde dehydrogenase family ABC1819 PF02777 Iron/manganese superoxide dismutases, C-terminal domain ABC1819 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain ABC1820 PF13091 PLD-like domain ABC1820 PF13396 Phospholipase_D-nuclease N-terminal ABC1821 PF03109 ABC1 family ABC1823 PF04239 Protein of unknown function (DUF421) ABC1825 PF03862 SpoVAC/SpoVAEB sporulation membrane protein ABC1826 PF07451 Stage V sporulation protein AD (SpoVAD) ABC1827 PF03862 SpoVAC/SpoVAEB sporulation membrane protein ABC1828 PF07943 Penicillin-binding protein 5, C-terminal domain ABC1828 PF00768 D-alanyl-D-alanine carboxypeptidase ABC1829 PF07670 Nucleoside recognition ABC1830 PF07670 Nucleoside recognition ABC1831 PF00849 RNA pseudouridylate synthase ABC1831 PF01479 S4 domain ABC1832 PF08534 Redoxin ABC1833 PF05140 ResB-like family ABC1834 PF01578 Cytochrome C assembly protein ABC1835 PF00072 Response regulator receiver domain ABC1835 PF00486 Transcriptional regulatory protein, C terminal ABC1836 PF00989 PAS fold ABC1836 PF00672 HAMP domain ABC1836 PF18698 Histidine kinase sensor domain ABC1836 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABC1836 PF00512 His Kinase A (phospho-acceptor) domain ABC1837 PF01032 FecCD transport family ABC1838 PF00005 ABC transporter ABC1841 PF03741 Integral membrane protein TerC family ABC1842 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ABC1842 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABC1843 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain ABC1843 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain ABC1843 PF01842 ACT domain ABC1845 PF14493 Helix-turn-helix domain ABC1846 PF00271 Helicase conserved C-terminal domain ABC1846 PF00270 DEAD/DEAH box helicase ABC1847 PF02517 CPBP intramembrane metalloprotease ABC1850 PF01381 Helix-turn-helix ABC1852 PF00534 Glycosyl transferases group 1 ABC1852 PF13439 Glycosyltransferase Family 4 ABC1853 PF13439 Glycosyltransferase Family 4 ABC1853 PF00534 Glycosyl transferases group 1 ABC1855 PF07687 Peptidase dimerisation domain ABC1855 PF01546 Peptidase family M20/M25/M40 ABC1856 PF00149 Calcineurin-like phosphoesterase ABC1857 PF13411 MerR HTH family regulatory protein ABC1858 PF05389 Negative regulator of genetic competence (MecA) ABC1859 PF00072 Response regulator receiver domain ABC1859 PF00486 Transcriptional regulatory protein, C terminal ABC1860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABC1860 PF13426 PAS domain ABC1860 PF00672 HAMP domain ABC1860 PF00512 His Kinase A (phospho-acceptor) domain ABC1862 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ABC1862 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain ABC1864 PF00710 Asparaginase, N-terminal ABC1864 PF17763 Glutaminase/Asparaginase C-terminal domain ABC1865 PF13367 PrsW family intramembrane metalloprotease ABC1867 PF01053 Cys/Met metabolism PLP-dependent enzyme ABC1868 PF02574 Homocysteine S-methyltransferase ABC1868 PF02219 Methylenetetrahydrofolate reductase ABC1869 PF02607 B12 binding domain ABC1869 PF02965 Vitamin B12 dependent methionine synthase, activation domain ABC1869 PF02574 Homocysteine S-methyltransferase ABC1869 PF02310 B12 binding domain ABC1869 PF00809 Pterin binding enzyme ABC1870 PF07486 Cell Wall Hydrolase ABC1870 PF01471 Putative peptidoglycan binding domain ABC1871 PF14620 YpeB sporulation ABC1872 PF02224 Cytidylate kinase ABC1873 PF01553 Acyltransferase ABC1874 PF00575 S1 RNA binding domain ABC1876 PF01926 50S ribosome-binding GTPase ABC1876 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal ABC1877 PF02660 Glycerol-3-phosphate acyltransferase ABC1878 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus ABC1878 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus ABC1882 PF09547 Stage IV sporulation protein A (spore_IV_A) ABC1883 PF01227 GTP cyclohydrolase I ABC1884 PF02081 Tryptophan RNA-binding attenuator protein ABC1885 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 ABC1886 PF01209 ubiE/COQ5 methyltransferase family ABC1887 PF01040 UbiA prenyltransferase family ABC1889 PF00348 Polyprenyl synthetase ABC1890 PF00334 Nucleoside diphosphate kinase ABC1891 PF03705 CheR methyltransferase, all-alpha domain ABC1891 PF01739 CheR methyltransferase, SAM binding domain ABC1892 PF01264 Chorismate synthase ABC1893 PF01761 3-dehydroquinate synthase ABC1894 PF07736 Chorismate mutase type I ABC1895 PF00425 chorismate binding enzyme ABC1895 PF04715 Anthranilate synthase component I, N terminal region ABC1896 PF02885 Glycosyl transferase family, helical bundle domain ABC1896 PF00591 Glycosyl transferase family, a/b domain ABC1897 PF00218 Indole-3-glycerol phosphate synthase ABC1898 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase ABC1899 PF00291 Pyridoxal-phosphate dependent enzyme ABC1900 PF00290 Tryptophan synthase alpha chain ABC1901 PF00155 Aminotransferase class I and II ABC1902 PF01842 ACT domain ABC1902 PF02153 Prephenate dehydrogenase ABC1903 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ABC1905 PF08858 IDEAL domain ABC1905 PF08864 UPF0302 domain ABC1907 PF00355 Rieske [2Fe-2S] domain ABC1908 PF00033 Cytochrome b/b6/petB ABC1909 PF13442 Cytochrome C oxidase, cbb3-type, subunit III ABC1909 PF00032 Cytochrome b(C-terminal)/b6/petD ABC1910 PF07187 Protein of unknown function (DUF1405) ABC1911 PF09577 Sporulation protein YpjB (SpoYpjB) ABC1912 PF04298 Putative neutral zinc metallopeptidase ABC1913 PF07690 Major Facilitator Superfamily ABC1914 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 ABC1914 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) ABC1915 PF03819 MazG nucleotide pyrophosphohydrolase domain ABC1916 PF01113 Dihydrodipicolinate reductase, N-terminus ABC1916 PF05173 Dihydrodipicolinate reductase, C-terminus ABC1917 PF02142 MGS-like domain ABC1919 PF01139 tRNA-splicing ligase RtcB ABC1921 PF13673 Acetyltransferase (GNAT) domain ABC1924 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain ABC1924 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain ABC1926 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain ABC1926 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ABC1927 PF08241 Methyltransferase domain ABC1928 PF06725 3D domain ABC1928 PF01476 LysM domain ABC1929 PF07501 G5 domain ABC1929 PF06725 3D domain ABC1929 PF03990 G5-linked-Ubiquitin-like domain ABC1930 PF16916 Dimerisation domain of Zinc Transporter ABC1930 PF01545 Cation efflux family ABC1931 PF01063 Amino-transferase class IV ABC1934 PF00005 ABC transporter ABC1935 PF02361 Cobalt transport protein ABC1936 PF02245 Methylpurine-DNA glycosylase (MPG) ABC1937 PF03641 Possible lysine decarboxylase ABC1938 PF00877 NlpC/P60 family ABC1938 PF01476 LysM domain ABC1940 PF00440 Bacterial regulatory proteins, tetR family ABC1940 PF17934 Tetracyclin repressor-like, C-terminal domain ABC1941 PF00296 Luciferase-like monooxygenase ABC1942 PF14171 Toxin SpoIISA, type II toxin-antitoxin system ABC1943 PF00296 Luciferase-like monooxygenase ABC1944 PF00291 Pyridoxal-phosphate dependent enzyme ABC1945 PF01053 Cys/Met metabolism PLP-dependent enzyme ABC1946 PF03992 Antibiotic biosynthesis monooxygenase ABC1947 PF04183 IucA / IucC family ABC1947 PF06276 Ferric iron reductase FhuF-like transporter ABC1948 PF04183 IucA / IucC family ABC1948 PF06276 Ferric iron reductase FhuF-like transporter ABC1949 PF00501 AMP-binding enzyme ABC1949 PF13193 AMP-binding enzyme C-terminal domain ABC1950 PF00550 Phosphopantetheine attachment site ABC1952 PF01261 Xylose isomerase-like TIM barrel ABC1954 PF00291 Pyridoxal-phosphate dependent enzyme ABC1955 PF03372 Endonuclease/Exonuclease/phosphatase family ABC1956 PF01709 Transcriptional regulator ABC1959 PF00892 EamA-like transporter family ABC1960 PF01883 Iron-sulfur cluster assembly protein ABC1961 PF00209 Sodium:neurotransmitter symporter family ABC1962 PF06445 GyrI-like small molecule binding domain ABC1962 PF12833 Helix-turn-helix domain ABC1963 PF10400 Virulence activator alpha C-term ABC1963 PF03551 Transcriptional regulator PadR-like family ABC1965 PF07690 Major Facilitator Superfamily ABC1970 PF00005 ABC transporter ABC1970 PF13732 Domain of unknown function (DUF4162) ABC1972 PF08281 Sigma-70, region 4 ABC1972 PF04542 Sigma-70 region 2 ABC1974 PF00561 alpha/beta hydrolase fold ABC1978 PF00302 Chloramphenicol acetyltransferase ABC1979 PF08818 Domain of unknown function (DU1801) ABC1982 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) ABC1982 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 ABC1983 PF01618 MotA/TolQ/ExbB proton channel family ABC1984 PF00691 OmpA family ABC1984 PF13677 Membrane MotB of proton-channel complex MotA/MotB ABC1985 PF01594 AI-2E family transporter ABC1986 PF01258 Prokaryotic dksA/traR C4-type zinc finger ABC1988 PF00521 DNA gyrase/topoisomerase IV, subunit A ABC1988 PF03989 DNA gyrase C-terminal domain, beta-propeller ABC1989 PF00204 DNA gyrase B ABC1989 PF00986 DNA gyrase B subunit, carboxyl terminus ABC1989 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABC1989 PF01751 Toprim domain ABC1990 PF13380 CoA binding domain ABC1991 PF00528 Binding-protein-dependent transport system inner membrane component ABC1992 PF00571 CBS domain ABC1992 PF00005 ABC transporter ABC1995 PF02074 Carboxypeptidase Taq (M32) metallopeptidase ABC1999 PF10819 Protein of unknown function (DUF2564) ABC2000 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ABC2000 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ABC2003 PF03323 Bacillus/Clostridium GerA spore germination protein ABC2004 PF03845 Spore germination protein ABC2006 PF00672 HAMP domain ABC2006 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABC2006 PF17202 Single cache domain 3 ABC2008 PF02627 Carboxymuconolactone decarboxylase family ABC2009 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ABC2009 PF00205 Thiamine pyrophosphate enzyme, central domain ABC2009 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ABC2010 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ABC2011 PF02926 THUMP domain ABC2011 PF01170 Putative RNA methylase family UPF0020 ABC2013 PF01385 Probable transposase ABC2013 PF12323 Helix-turn-helix domain ABC2013 PF07282 Putative transposase DNA-binding domain ABC2014 PF13456 Reverse transcriptase-like ABC2015 PF05103 DivIVA protein ABC2016 PF06908 YspA SLOG family ABC2018 PF13482 RNase_H superfamily ABC2019 PF00270 DEAD/DEAH box helicase ABC2019 PF09369 Domain of unknown function (DUF1998) ABC2019 PF00271 Helicase conserved C-terminal domain ABC2021 PF03323 Bacillus/Clostridium GerA spore germination protein ABC2022 PF03845 Spore germination protein ABC2023 PF05504 Spore germination B3/ GerAC like, C-terminal ABC2025 PF01738 Dienelactone hydrolase family ABC2026 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ABC2030 PF00701 Dihydrodipicolinate synthetase family ABC2031 PF08810 Kinase associated protein B ABC2033 PF14005 YpjP-like protein ABC2034 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster ABC2034 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABC2035 PF00310 Glutamine amidotransferases class-II ABC2035 PF01645 Conserved region in glutamate synthase ABC2035 PF04898 Glutamate synthase central domain ABC2035 PF01493 GXGXG motif ABC2039 PF03703 Bacterial PH domain ABC2040 PF03703 Bacterial PH domain ABC2042 PF08712 Scaffold protein Nfu/NifU N terminal ABC2042 PF13769 Virulence factor ABC2045 PF06491 Disulphide isomerase ABC2047 PF12706 Beta-lactamase superfamily domain ABC2047 PF00753 Metallo-beta-lactamase superfamily ABC2048 PF01965 DJ-1/PfpI family ABC2049 PF00585 C-terminal regulatory domain of Threonine dehydratase ABC2049 PF00291 Pyridoxal-phosphate dependent enzyme ABC2052 PF13411 MerR HTH family regulatory protein ABC2053 PF10720 Protein of unknown function (DUF2515) ABC2054 PF03838 Recombination protein U ABC2055 PF00905 Penicillin binding protein transpeptidase domain ABC2055 PF00912 Transglycosylase ABC2056 PF00350 Dynamin family ABC2057 PF00633 Helix-hairpin-helix motif ABC2057 PF00730 HhH-GPD superfamily base excision DNA repair protein ABC2057 PF10576 Iron-sulfur binding domain of endonuclease III ABC2058 PF07261 Replication initiation and membrane attachment ABC2059 PF00152 tRNA synthetases class II (D, K and N) ABC2059 PF01336 OB-fold nucleic acid binding domain ABC2061 PF14084 Protein of unknown function (DUF4264) ABC2062 PF01979 Amidohydrolase family ABC2063 PF13307 Helicase C-terminal domain ABC2063 PF00929 Exonuclease ABC2063 PF04851 Type III restriction enzyme, res subunit ABC2065 PF02261 Aspartate decarboxylase ABC2066 PF02569 Pantoate-beta-alanine ligase ABC2067 PF02548 Ketopantoate hydroxymethyltransferase ABC2068 PF02237 Biotin protein ligase C terminal domain ABC2068 PF03099 Biotin/lipoate A/B protein ligase family ABC2068 PF08279 HTH domain ABC2070 PF00534 Glycosyl transferases group 1 ABC2070 PF13439 Glycosyltransferase Family 4 ABC2071 PF02585 GlcNAc-PI de-N-acetylase ABC2075 PF01520 N-acetylmuramoyl-L-alanine amidase ABC2075 PF04122 Putative cell wall binding repeat 2 ABC2077 PF00392 Bacterial regulatory proteins, gntR family ABC2077 PF07702 UTRA domain ABC2078 PF11975 Family 4 glycosyl hydrolase C-terminal domain ABC2078 PF02056 Family 4 glycosyl hydrolase ABC2079 PF04794 YdjC-like protein ABC2080 PF02378 Phosphotransferase system, EIIC ABC2080 PF00367 phosphotransferase system, EIIB ABC2086 PF00206 Lyase ABC2086 PF10397 Adenylosuccinate lyase C-terminus ABC2087 PF00367 phosphotransferase system, EIIB ABC2087 PF02378 Phosphotransferase system, EIIC ABC2091 PF00534 Glycosyl transferases group 1 ABC2091 PF09318 Glycosyl transferase 1 domain A ABC2099 PF02770 Acyl-CoA dehydrogenase, middle domain ABC2099 PF08028 Acyl-CoA dehydrogenase, C-terminal domain ABC2099 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABC2101 PF09954 Uncharacterized protein conserved in bacteria (DUF2188) ABC2102 PF13180 PDZ domain ABC2103 PF08830 Protein of unknown function (DUF1806) ABC2104 PF02585 GlcNAc-PI de-N-acetylase ABC2105 PF01367 5'-3' exonuclease, C-terminal SAM fold ABC2105 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain ABC2109 PF00270 DEAD/DEAH box helicase ABC2109 PF00271 Helicase conserved C-terminal domain ABC2109 PF16124 RecQ zinc-binding ABC2109 PF00570 HRDC domain ABC2109 PF09382 RQC domain ABC2110 PF00248 Aldo/keto reductase family ABC2111 PF00005 ABC transporter ABC2111 PF12848 ABC transporter ABC2113 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ABC2113 PF00364 Biotin-requiring enzyme ABC2113 PF02817 e3 binding domain ABC2114 PF16870 2-oxoglutarate dehydrogenase C-terminal ABC2114 PF00676 Dehydrogenase E1 component ABC2114 PF02779 Transketolase, pyrimidine binding domain ABC2118 PF02566 OsmC-like protein ABC2119 PF01131 DNA topoisomerase ABC2119 PF01751 Toprim domain ABC2121 PF00005 ABC transporter ABC2124 PF07730 Histidine kinase ABC2125 PF00196 Bacterial regulatory proteins, luxR family ABC2125 PF00072 Response regulator receiver domain ABC2126 PF14489 QueF-like protein ABC2127 PF04055 Radical SAM superfamily ABC2128 PF01242 6-pyruvoyl tetrahydropterin synthase ABC2129 PF06508 Queuosine biosynthesis protein QueC ABC2130 PF02073 Thermophilic metalloprotease (M29) ABC2131 PF01235 Sodium:alanine symporter family ABC2132 PF00708 Acylphosphatase ABC2133 PF17368 Spore morphogenesis and germination YwcE ABC2134 PF03626 Prokaryotic Cytochrome C oxidase subunit IV ABC2135 PF00510 Cytochrome c oxidase subunit III ABC2136 PF00115 Cytochrome C and Quinol oxidase polypeptide I ABC2137 PF00116 Cytochrome C oxidase subunit II, periplasmic domain ABC2137 PF02790 Cytochrome C oxidase subunit II, transmembrane domain ABC2139 PF07859 alpha/beta hydrolase fold ABC2140 PF01625 Peptide methionine sulfoxide reductase ABC2142 PF01584 CheW-like domain ABC2142 PF00072 Response regulator receiver domain ABC2144 PF00011 Hsp20/alpha crystallin family ABC2147 PF10388 EAL-domain associated signalling protein domain ABC2147 PF00563 EAL domain ABC2148 PF12697 Alpha/beta hydrolase family ABC2151 PF02540 NAD synthase ABC2152 PF03061 Thioesterase superfamily ABC2153 PF00004 ATPase family associated with various cellular activities (AAA) ABC2153 PF17866 AAA lid domain ABC2157 PF00330 Aconitase family (aconitate hydratase) ABC2157 PF00694 Aconitase C-terminal domain ABC2159 PF11084 Protein of unknown function (DUF2621) ABC2160 PF00005 ABC transporter ABC2160 PF00664 ABC transporter transmembrane region ABC2161 PF00005 ABC transporter ABC2161 PF00664 ABC transporter transmembrane region ABC2162 PF03672 Uncharacterised protein family (UPF0154) ABC2163 PF10747 Sporulation inhibitor of replication protein SirA ABC2164 PF02779 Transketolase, pyrimidine binding domain ABC2164 PF02780 Transketolase, C-terminal domain ABC2164 PF00456 Transketolase, thiamine diphosphate binding domain ABC2165 PF05979 Bacterial protein of unknown function (DUF896) ABC2166 PF00239 Resolvase, N terminal domain ABC2167 PF01726 LexA DNA binding domain ABC2167 PF00717 Peptidase S24-like ABC2168 PF07690 Major Facilitator Superfamily ABC2169 PF11798 IMS family HHH motif ABC2169 PF11799 impB/mucB/samB family C-terminal domain ABC2169 PF00817 impB/mucB/samB family ABC2172 PF09339 IclR helix-turn-helix domain ABC2172 PF01614 Bacterial transcriptional regulator ABC2173 PF01557 Fumarylacetoacetate (FAA) hydrolase family ABC2174 PF01274 Malate synthase ABC2175 PF01565 FAD binding domain ABC2175 PF02913 FAD linked oxidases, C-terminal domain ABC2176 PF13183 4Fe-4S dicluster domain ABC2176 PF02754 Cysteine-rich domain ABC2177 PF02913 FAD linked oxidases, C-terminal domain ABC2177 PF01565 FAD binding domain ABC2179 PF03951 Glutamine synthetase, beta-Grasp domain ABC2179 PF00120 Glutamine synthetase, catalytic domain ABC2180 PF06838 Methionine gamma-lyase ABC2181 PF00004 ATPase family associated with various cellular activities (AAA) ABC2181 PF17866 AAA lid domain ABC2183 PF17209 Hfq protein ABC2185 PF04445 Putative SAM-dependent methyltransferase ABC2186 PF08676 MutL C terminal dimerisation domain ABC2186 PF01119 DNA mismatch repair protein, C-terminal domain ABC2187 PF05188 MutS domain II ABC2187 PF05192 MutS domain III ABC2187 PF01624 MutS domain I ABC2187 PF05190 MutS family domain IV ABC2187 PF00488 MutS domain V ABC2188 PF10628 Outer spore coat protein E (CotE) ABC2189 PF06133 Control of competence regulator ComK, YlbF/YmcA ABC2190 PF00919 Uncharacterized protein family UPF0004 ABC2190 PF01938 TRAM domain ABC2190 PF04055 Radical SAM superfamily ABC2192 PF04232 Stage V sporulation protein S (SpoVS) ABC2193 PF13277 YmdB-like protein ABC2194 PF00013 KH domain ABC2194 PF01966 HD domain ABC2194 PF12072 Domain of unknown function (DUF3552) ABC2199 PF00154 recA bacterial DNA recombination protein ABC2200 PF00270 DEAD/DEAH box helicase ABC2200 PF00271 Helicase conserved C-terminal domain ABC2201 PF18146 Damage-inducible protein CinA KH domain ABC2201 PF02464 Competence-damaged protein ABC2201 PF00994 Probable molybdopterin binding domain ABC2202 PF01066 CDP-alcohol phosphatidyltransferase ABC2203 PF13464 Domain of unknown function (DUF4115) ABC2204 PF11868 Protein of unknown function (DUF3388) ABC2205 PF11588 Protein of unknown function (DUF3243) ABC2207 PF00675 Insulinase (Peptidase family M16) ABC2207 PF05193 Peptidase M16 inactive domain ABC2208 PF05193 Peptidase M16 inactive domain ABC2209 PF07702 UTRA domain ABC2209 PF00392 Bacterial regulatory proteins, gntR family ABC2210 PF17854 FtsK alpha domain ABC2210 PF09397 Ftsk gamma domain ABC2210 PF01580 FtsK/SpoIIIE family ABC2212 PF00574 Clp protease ABC2213 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain ABC2213 PF00753 Metallo-beta-lactamase superfamily ABC2213 PF17770 Ribonuclease J C-terminal domain ABC2214 PF00701 Dihydrodipicolinate synthetase family ABC2215 PF13840 ACT domain ABC2215 PF00696 Amino acid kinase family ABC2216 PF02774 Semialdehyde dehydrogenase, dimerisation domain ABC2216 PF01118 Semialdehyde dehydrogenase, NAD binding domain ABC2217 PF02441 Flavoprotein ABC2218 PF16924 Dipicolinate synthase subunit A N-terminal domain ABC2218 PF01262 Alanine dehydrogenase/PNT, C-terminal domain ABC2220 PF05193 Peptidase M16 inactive domain ABC2220 PF00675 Insulinase (Peptidase family M16) ABC2221 PF01522 Polysaccharide deacetylase ABC2222 PF00575 S1 RNA binding domain ABC2222 PF00013 KH domain ABC2222 PF03725 3' exoribonuclease family, domain 2 ABC2222 PF01138 3' exoribonuclease family, domain 1 ABC2222 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain ABC2223 PF00312 Ribosomal protein S15 ABC2224 PF06574 FAD synthetase ABC2224 PF01687 Riboflavin kinase ABC2225 PF16198 tRNA pseudouridylate synthase B C-terminal domain ABC2225 PF01509 TruB family pseudouridylate synthase (N terminal domain) ABC2226 PF02033 Ribosome-binding factor A ABC2228 PF11987 Translation-initiation factor 2 ABC2228 PF00009 Elongation factor Tu GTP binding domain ABC2228 PF04760 Translation initiation factor IF-2, N-terminal region ABC2229 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family ABC2230 PF04296 Protein of unknown function (DUF448) ABC2231 PF00575 S1 RNA binding domain ABC2231 PF13184 NusA-like KH domain ABC2231 PF08529 NusA N-terminal domain ABC2232 PF02576 RimP N-terminal domain ABC2232 PF17384 RimP C-terminal SH3 domain ABC2233 PF11490 DNA polymerase III polC-type N-terminus II ABC2233 PF14480 DNA polymerase III polC-type N-terminus I ABC2233 PF07733 Bacterial DNA polymerase III alpha NTPase domain ABC2233 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ABC2233 PF14579 Helix-hairpin-helix motif ABC2233 PF02811 PHP domain ABC2233 PF00929 Exonuclease ABC2234 PF03129 Anticodon binding domain ABC2234 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ABC2234 PF04073 Aminoacyl-tRNA editing domain ABC2235 PF02163 Peptidase family M50 ABC2235 PF13180 PDZ domain ABC2236 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase ABC2236 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain ABC2236 PF13288 DXP reductoisomerase C-terminal domain ABC2238 PF01255 Putative undecaprenyl diphosphate synthase ABC2239 PF01765 Ribosome recycling factor ABC2240 PF00696 Amino acid kinase family ABC2241 PF00889 Elongation factor TS ABC2242 PF00318 Ribosomal protein S2 ABC2244 PF04545 Sigma-70, region 4 ABC2244 PF04539 Sigma-70 region 3 ABC2244 PF04542 Sigma-70 region 2 ABC2245 PF03975 CheD chemotactic sensory transduction ABC2247 PF01339 CheB methylesterase ABC2247 PF00072 Response regulator receiver domain ABC2249 PF00448 SRP54-type protein, GTPase domain ABC2250 PF00771 FHIPEP family ABC2251 PF01312 FlhB HrpN YscU SpaS Family ABC2252 PF01311 Bacterial export proteins, family 1 ABC2253 PF01313 Bacterial export proteins, family 3 ABC2254 PF00813 FliP family ABC2255 PF04347 Flagellar biosynthesis protein, FliO ABC2256 PF00072 Response regulator receiver domain ABC2257 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ABC2257 PF04509 CheC-like family ABC2258 PF02154 Flagellar motor switch protein FliM ABC2258 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term ABC2261 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ABC2261 PF00460 Flagella basal body rod protein ABC2262 PF03963 Flagellar hook capping protein - N-terminal region ABC2266 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ABC2266 PF02874 ATP synthase alpha/beta family, beta-barrel domain ABC2266 PF18269 T3SS EscN ATPase C-terminal domain ABC2267 PF02108 Flagellar assembly protein FliH ABC2268 PF01706 FliG C-terminal domain ABC2268 PF14841 FliG middle domain ABC2268 PF14842 FliG N-terminal domain ABC2269 PF08345 Flagellar M-ring protein C-terminal ABC2269 PF01514 Secretory protein of YscJ/FliF family ABC2270 PF02049 Flagellar hook-basal body complex protein FliE ABC2271 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ABC2271 PF00460 Flagella basal body rod protein ABC2272 PF00460 Flagella basal body rod protein ABC2273 PF06018 CodY GAF-like domain ABC2273 PF08222 CodY helix-turn-helix domain ABC2274 PF00004 ATPase family associated with various cellular activities (AAA) ABC2274 PF07724 AAA domain (Cdc48 subfamily) ABC2274 PF10431 C-terminal, D2-small domain, of ClpB protein ABC2275 PF00227 Proteasome subunit ABC2276 PF00589 Phage integrase family ABC2276 PF02899 Phage integrase, N-terminal SAM-like domain ABC2277 PF01134 Glucose inhibited division protein A ABC2278 PF01396 Topoisomerase DNA binding C4 zinc finger ABC2278 PF01751 Toprim domain ABC2278 PF01131 DNA topoisomerase ABC2279 PF02481 DNA recombination-mediator protein A ABC2280 PF02629 CoA binding domain ABC2280 PF00549 CoA-ligase ABC2281 PF08442 ATP-grasp domain ABC2281 PF00549 CoA-ligase ABC2284 PF01351 Ribonuclease HII ABC2285 PF01926 50S ribosome-binding GTPase ABC2286 PF10502 Signal peptidase, peptidase S26 ABC2287 PF01245 Ribosomal protein L19 ABC2288 PF00750 tRNA synthetases class I (R) ABC2288 PF03485 Arginyl tRNA synthetase N terminal domain ABC2288 PF05746 DALR anticodon binding domain ABC2289 PF01746 tRNA (Guanine-1)-methyltransferase ABC2290 PF05239 PRC-barrel domain ABC2290 PF01782 RimM N-terminal domain ABC2293 PF00886 Ribosomal protein S16 ABC2294 PF00448 SRP54-type protein, GTPase domain ABC2294 PF02978 Signal peptide binding domain ABC2294 PF02881 SRP54-type protein, helical bundle domain ABC2295 PF04297 Putative helix-turn-helix protein, YlxM / p13 like ABC2296 PF00448 SRP54-type protein, GTPase domain ABC2296 PF02881 SRP54-type protein, helical bundle domain ABC2297 PF02463 RecF/RecN/SMC N terminal domain ABC2297 PF06470 SMC proteins Flexible Hinge Domain ABC2298 PF06569 Protein of unknown function (DUF1128) ABC2299 PF14622 Ribonuclease-III-like ABC2299 PF00035 Double-stranded RNA binding motif ABC2300 PF00550 Phosphopantetheine attachment site ABC2302 PF00698 Acyl transferase domain ABC2303 PF02504 Fatty acid synthesis protein ABC2304 PF01575 MaoC like domain ABC2305 PF17191 RecG wedge domain ABC2305 PF00271 Helicase conserved C-terminal domain ABC2305 PF00270 DEAD/DEAH box helicase ABC2306 PF03313 Serine dehydratase alpha chain ABC2307 PF03315 Serine dehydratase beta chain ABC2307 PF01842 ACT domain ABC2308 PF02645 Uncharacterised protein, DegV family COG1307 ABC2309 PF13684 Dihydroxyacetone kinase family ABC2309 PF02734 DAK2 domain ABC2310 PF03780 Asp23 family, cell envelope-related function ABC2311 PF00830 Ribosomal L28 family ABC2312 PF08183 Stage V sporulation protein family ABC2313 PF00834 Ribulose-phosphate 3 epimerase family ABC2314 PF03193 RsgA GTPase ABC2314 PF16745 RsgA N-terminal domain ABC2315 PF00069 Protein kinase domain ABC2315 PF03793 PASTA domain ABC2317 PF01189 16S rRNA methyltransferase RsmB/F ABC2317 PF01029 NusB family ABC2318 PF02911 Formyl transferase, C-terminal domain ABC2318 PF00551 Formyl transferase ABC2319 PF00271 Helicase conserved C-terminal domain ABC2319 PF17764 3′ DNA-binding domain (3′BD) ABC2319 PF04851 Type III restriction enzyme, res subunit ABC2319 PF18319 PriA DNA helicase Cys-rich region (CRR) domain ABC2319 PF18074 Primosomal protein N C-terminal domain ABC2320 PF02441 Flavoprotein ABC2320 PF04127 DNA / pantothenate metabolism flavoprotein ABC2321 PF01192 RNA polymerase Rpb6 ABC2322 PF00625 Guanylate kinase ABC2323 PF04025 Domain of unknown function (DUF370) ABC2324 PF00690 Cation transporter/ATPase, N-terminus ABC2324 PF00689 Cation transporting ATPase, C-terminus ABC2326 PF09586 Bacterial membrane protein YfhO ABC2329 PF00156 Phosphoribosyl transferase domain ABC2330 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family ABC2331 PF01180 Dihydroorotate dehydrogenase ABC2332 PF00970 Oxidoreductase FAD-binding domain ABC2332 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B ABC2333 PF02142 MGS-like domain ABC2333 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain ABC2333 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ABC2334 PF00117 Glutamine amidotransferase class-I ABC2334 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain ABC2335 PF01979 Amidohydrolase family ABC2336 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ABC2336 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ABC2337 PF00860 Permease family ABC2338 PF00156 Phosphoribosyl transferase domain ABC2339 PF00849 RNA pseudouridylate synthase ABC2339 PF01479 S4 domain ABC2340 PF01252 Signal peptidase (SPase) II ABC2341 PF01258 Prokaryotic dksA/traR C4-type zinc finger ABC2342 PF00133 tRNA synthetases class I (I, L, M and V) ABC2342 PF08264 Anticodon-binding domain of tRNA ABC2342 PF06827 Zinc finger found in FPG and IleRS ABC2343 PF05103 DivIVA protein ABC2344 PF17774 Putative RNA-binding domain in YlmH ABC2344 PF01479 S4 domain ABC2345 PF02325 YGGT family ABC2346 PF04472 Cell division protein SepF ABC2347 PF01168 Alanine racemase, N-terminal domain ABC2349 PF05239 PRC-barrel domain ABC2350 PF04545 Sigma-70, region 4 ABC2350 PF04539 Sigma-70 region 3 ABC2350 PF04542 Sigma-70 region 2 ABC2351 PF04545 Sigma-70, region 4 ABC2351 PF04542 Sigma-70 region 2 ABC2352 PF03419 Sporulation factor SpoIIGA ABC2353 PF12327 FtsZ family, C-terminal domain ABC2353 PF00091 Tubulin/FtsZ family, GTPase domain ABC2354 PF02491 SHS2 domain inserted in FTSA ABC2355 PF08478 POTRA domain, FtsQ-type ABC2356 PF01098 Cell cycle protein ABC2357 PF02875 Mur ligase family, glutamate ligase domain ABC2357 PF08245 Mur ligase middle domain ABC2358 PF00953 Glycosyl transferase family 4 ABC2358 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 ABC2359 PF08245 Mur ligase middle domain ABC2359 PF01225 Mur ligase family, catalytic domain ABC2359 PF02875 Mur ligase family, glutamate ligase domain ABC2360 PF02875 Mur ligase family, glutamate ligase domain ABC2360 PF08245 Mur ligase middle domain ABC2360 PF01225 Mur ligase family, catalytic domain ABC2361 PF03793 PASTA domain ABC2361 PF00905 Penicillin binding protein transpeptidase domain ABC2361 PF03717 Penicillin-binding Protein dimerisation domain ABC2364 PF01795 MraW methylase family ABC2365 PF02381 MraZ protein, putative antitoxin-like ABC2366 PF10079 Bacillithiol biosynthesis BshC ABC2368 PF08546 Ketopantoate reductase PanE/ApbA C terminal ABC2368 PF02558 Ketopantoate reductase PanE/ApbA ABC2369 PF00583 Acetyltransferase (GNAT) family ABC2371 PF01783 Ribosomal L32p protein family ABC2372 PF02620 Large ribosomal RNA subunit accumulation protein YceD ABC2373 PF05636 HIGH Nucleotidyl Transferase ABC2374 PF13180 PDZ domain ABC2374 PF05362 Lon protease (S16) C-terminal proteolytic domain ABC2375 PF01734 Patatin-like phospholipase ABC2376 PF07670 Nucleoside recognition ABC2377 PF01467 Cytidylyltransferase-like ABC2380 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) ABC2384 PF14071 Putative coat protein ABC2386 PF00188 Cysteine-rich secretory protein family ABC2386 PF14504 CAP-associated N-terminal ABC2387 PF08868 YugN-like family ABC2394 PF02628 Cytochrome oxidase assembly protein ABC2395 PF02785 Biotin carboxylase C-terminal domain ABC2395 PF02436 Conserved carboxylase domain ABC2395 PF00682 HMGL-like ABC2395 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ABC2395 PF00364 Biotin-requiring enzyme ABC2395 PF00289 Biotin carboxylase, N-terminal domain ABC2396 PF07408 Protein of unknown function (DUF1507) ABC2398 PF02562 PhoH-like protein ABC2398 PF13638 PIN domain ABC2399 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) ABC2400 PF14036 YlaH-like protein ABC2403 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ABC2403 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ABC2404 PF00459 Inositol monophosphatase family ABC2405 PF06335 Protein of unknown function (DUF1054) ABC2406 PF05256 Uncharacterised protein family (UPF0223) ABC2407 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain ABC2407 PF01276 Orn/Lys/Arg decarboxylase, major domain ABC2410 PF02028 BCCT, betaine/carnitine/choline family transporter ABC2412 PF12911 N-terminal TM domain of oligopeptide transport permease C ABC2412 PF00528 Binding-protein-dependent transport system inner membrane component ABC2413 PF00528 Binding-protein-dependent transport system inner membrane component ABC2414 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ABC2415 PF00005 ABC transporter ABC2415 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ABC2416 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ABC2416 PF00005 ABC transporter ABC2417 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ABC2417 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABC2418 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ABC2418 PF00364 Biotin-requiring enzyme ABC2418 PF02817 e3 binding domain ABC2419 PF02779 Transketolase, pyrimidine binding domain ABC2419 PF02780 Transketolase, C-terminal domain ABC2420 PF00676 Dehydrogenase E1 component ABC2423 PF01327 Polypeptide deformylase ABC2425 PF00753 Metallo-beta-lactamase superfamily ABC2425 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain ABC2425 PF17770 Ribonuclease J C-terminal domain ABC2426 PF02080 TrkA-C domain ABC2426 PF02254 TrkA-N domain ABC2427 PF00578 AhpC/TSA family ABC2428 PF00578 AhpC/TSA family ABC2428 PF10417 C-terminal domain of 1-Cys peroxiredoxin ABC2429 PF00924 Mechanosensitive ion channel ABC2430 PF03698 Uncharacterised protein family (UPF0180) ABC2431 PF07687 Peptidase dimerisation domain ABC2431 PF01546 Peptidase family M20/M25/M40 ABC2432 PF00202 Aminotransferase class-III ABC2433 PF14602 Hexapeptide repeat of succinyl-transferase ABC2433 PF00132 Bacterial transferase hexapeptide (six repeats) ABC2433 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal ABC2436 PF00924 Mechanosensitive ion channel ABC2438 PF01594 AI-2E family transporter ABC2439 PF13460 NAD(P)H-binding ABC2441 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ABC2443 PF00403 Heavy-metal-associated domain ABC2444 PF02583 Metal-sensitive transcriptional repressor ABC2448 PF06491 Disulphide isomerase ABC2449 PF02817 e3 binding domain ABC2449 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ABC2449 PF00364 Biotin-requiring enzyme ABC2450 PF02779 Transketolase, pyrimidine binding domain ABC2450 PF02780 Transketolase, C-terminal domain ABC2451 PF00676 Dehydrogenase E1 component ABC2452 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ABC2452 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABC2453 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ABC2453 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain ABC2454 PF00989 PAS fold ABC2454 PF02954 Bacterial regulatory protein, Fis family ABC2454 PF00158 Sigma-54 interaction domain ABC2455 PF11118 Protein of unknown function (DUF2627) ABC2457 PF00072 Response regulator receiver domain ABC2457 PF08769 Sporulation initiation factor Spo0A C terminal ABC2458 PF17820 PDZ domain ABC2458 PF05580 SpoIVB peptidase S55 ABC2459 PF02463 RecF/RecN/SMC N terminal domain ABC2460 PF02863 Arginine repressor, C-terminal domain ABC2460 PF01316 Arginine repressor, DNA binding domain ABC2461 PF01479 S4 domain ABC2461 PF01728 FtsJ-like methyltransferase ABC2462 PF02780 Transketolase, C-terminal domain ABC2462 PF02779 Transketolase, pyrimidine binding domain ABC2462 PF13292 1-deoxy-D-xylulose-5-phosphate synthase ABC2463 PF00348 Polyprenyl synthetase ABC2464 PF02609 Exonuclease VII small subunit ABC2465 PF13742 OB-fold nucleic acid binding domain ABC2465 PF02601 Exonuclease VII, large subunit ABC2466 PF01029 NusB family ABC2467 PF03780 Asp23 family, cell envelope-related function ABC2468 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ABC2468 PF02785 Biotin carboxylase C-terminal domain ABC2468 PF00289 Biotin carboxylase, N-terminal domain ABC2469 PF00364 Biotin-requiring enzyme ABC2471 PF12685 SpoIIIAH-like protein ABC2473 PF09581 Stage III sporulation protein AF (Spore_III_AF) ABC2474 PF09546 Stage III sporulation protein AE (spore_III_AE) ABC2475 PF06686 Stage III sporulation protein AC/AD protein family ABC2476 PF06686 Stage III sporulation protein AC/AD protein family ABC2477 PF09548 Stage III sporulation protein AB (spore_III_AB) ABC2479 PF10942 Protein of unknown function (DUF2619) ABC2481 PF01202 Shikimate kinase ABC2482 PF09285 Elongation factor P, C-terminal ABC2482 PF01132 Elongation factor P (EF-P) OB domain ABC2482 PF08207 Elongation factor P (EF-P) KOW-like domain ABC2483 PF01321 Creatinase/Prolidase N-terminal domain ABC2483 PF00557 Metallopeptidase family M24 ABC2484 PF11085 Conserved membrane protein YqhR ABC2486 PF01734 Patatin-like phospholipase ABC2487 PF02742 Iron dependent repressor, metal binding and dimerisation domain ABC2487 PF01325 Iron dependent repressor, N-terminal DNA binding domain ABC2489 PF01063 Amino-transferase class IV ABC2490 PF13538 UvrD-like helicase C-terminal domain ABC2491 PF03099 Biotin/lipoate A/B protein ligase family ABC2492 PF00581 Rhodanese-like domain ABC2493 PF02347 Glycine cleavage system P-protein ABC2494 PF02347 Glycine cleavage system P-protein ABC2495 PF01571 Aminomethyltransferase folate-binding domain ABC2495 PF08669 Glycine cleavage T-protein C-terminal barrel domain ABC2496 PF00176 SNF2 family N-terminal domain ABC2496 PF00271 Helicase conserved C-terminal domain ABC2497 PF11079 Bacterial protein YqhG of unknown function ABC2499 PF00753 Metallo-beta-lactamase superfamily ABC2500 PF11117 Protein of unknown function (DUF2626) ABC2505 PF07963 Prokaryotic N-terminal methylation motif ABC2506 PF01809 Putative membrane protein insertion efficiency factor ABC2508 PF00437 Type II/IV secretion system protein ABC2509 PF00580 UvrD/REP helicase N-terminal domain ABC2509 PF13361 UvrD-like helicase C-terminal domain ABC2511 PF07552 Spore Coat Protein X and V domain ABC2515 PF01209 ubiE/COQ5 methyltransferase family ABC2516 PF07098 Protein of unknown function (DUF1360) ABC2518 PF00849 RNA pseudouridylate synthase ABC2519 PF01513 ATP-NAD kinase ABC2520 PF04607 Region found in RelA / SpoT proteins ABC2522 PF01928 CYTH domain ABC2523 PF01464 Transglycosylase SLT domain ABC2524 PF01152 Bacterial-like globin ABC2528 PF03960 ArsC family ABC2529 PF13508 Acetyltransferase (GNAT) domain ABC2532 PF03006 Haemolysin-III related ABC2533 PF01966 HD domain ABC2534 PF00578 AhpC/TSA family ABC2535 PF00579 tRNA synthetases class I (W and Y) ABC2536 PF12227 Protein of unknown function (DUF3603) ABC2537 PF10026 Predicted Zn-dependent protease (DUF2268) ABC2538 PF04607 Region found in RelA / SpoT proteins ABC2539 PF00485 Phosphoribulokinase / Uridine kinase family ABC2540 PF00188 Cysteine-rich secretory protein family ABC2541 PF07486 Cell Wall Hydrolase ABC2541 PF01471 Putative peptidoglycan binding domain ABC2543 PF01743 Poly A polymerase head domain ABC2543 PF12627 Probable RNA and SrmB- binding site of polymerase A ABC2543 PF13735 tRNA nucleotidyltransferase domain 2 putative ABC2546 PF02801 Beta-ketoacyl synthase, C-terminal domain ABC2546 PF00109 Beta-ketoacyl synthase, N-terminal domain ABC2547 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ABC2547 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III ABC2549 PF16658 Class II release factor RF3, C-terminal domain ABC2549 PF00009 Elongation factor Tu GTP binding domain ABC2549 PF03144 Elongation factor Tu domain 2 ABC2550 PF01370 NAD dependent epimerase/dehydratase family ABC2552 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain ABC2552 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain ABC2553 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain ABC2553 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ABC2554 PF00117 Glutamine amidotransferase class-I ABC2554 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain ABC2555 PF00202 Aminotransferase class-III ABC2556 PF00696 Amino acid kinase family ABC2557 PF01960 ArgJ family ABC2558 PF01118 Semialdehyde dehydrogenase, NAD binding domain ABC2558 PF02774 Semialdehyde dehydrogenase, dimerisation domain ABC2559 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) ABC2564 PF00271 Helicase conserved C-terminal domain ABC2564 PF00176 SNF2 family N-terminal domain ABC2564 PF12419 SNF2 Helicase protein ABC2567 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) ABC2567 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 ABC2568 PF00326 Prolyl oligopeptidase family ABC2570 PF01206 Sulfurtransferase TusA ABC2570 PF00581 Rhodanese-like domain ABC2572 PF01039 Carboxyl transferase domain ABC2576 PF05593 RHS Repeat ABC2579 PF08858 IDEAL domain ABC2580 PF00733 Asparagine synthase ABC2580 PF13537 Glutamine amidotransferase domain ABC2581 PF01584 CheW-like domain ABC2582 PF01627 Hpt domain ABC2582 PF02895 Signal transducing histidine kinase, homodimeric domain ABC2582 PF07194 P2 response regulator binding domain ABC2582 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABC2582 PF01584 CheW-like domain ABC2583 PF00580 UvrD/REP helicase N-terminal domain ABC2583 PF12705 PD-(D/E)XK nuclease superfamily ABC2583 PF13361 UvrD-like helicase C-terminal domain ABC2584 PF12705 PD-(D/E)XK nuclease superfamily ABC2586 PF01895 PhoU domain ABC2587 PF00005 ABC transporter ABC2588 PF00005 ABC transporter ABC2589 PF00528 Binding-protein-dependent transport system inner membrane component ABC2590 PF00528 Binding-protein-dependent transport system inner membrane component ABC2591 PF12849 PBP superfamily domain ABC2592 PF05163 DinB family ABC2593 PF01425 Amidase ABC2594 PF07722 Peptidase C26 ABC2595 PF01266 FAD dependent oxidoreductase ABC2596 PF03167 Uracil DNA glycosylase superfamily ABC2598 PF01979 Amidohydrolase family ABC2599 PF18277 AbrB C-terminal domain ABC2599 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin ABC2600 PF01016 Ribosomal L27 protein ABC2601 PF04327 Cysteine protease Prp ABC2602 PF00829 Ribosomal prokaryotic L21 protein ABC2603 PF10150 Ribonuclease E/G family ABC2603 PF00575 S1 RNA binding domain ABC2604 PF02163 Peptidase family M50 ABC2605 PF01551 Peptidase family M23 ABC2606 PF00248 Aldo/keto reductase family ABC2607 PF02632 BioY family ABC2608 PF01967 MoaC family ABC2609 PF01965 DJ-1/PfpI family ABC2610 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain ABC2611 PF03775 Septum formation inhibitor MinC, C-terminal domain ABC2612 PF04093 rod shape-determining protein MreD ABC2613 PF04085 rod shape-determining protein MreC ABC2615 PF04002 RadC-like JAB domain ABC2616 PF02545 Maf-like protein ABC2617 PF07676 WD40-like Beta Propeller Repeat ABC2617 PF00326 Prolyl oligopeptidase family ABC2619 PF06750 Bacterial Peptidase A24 N-terminal domain ABC2619 PF01478 Type IV leader peptidase family ABC2620 PF08245 Mur ligase middle domain ABC2620 PF02875 Mur ligase family, glutamate ligase domain ABC2621 PF10458 Valyl tRNA synthetase tRNA binding arm ABC2621 PF00133 tRNA synthetases class I (I, L, M and V) ABC2621 PF08264 Anticodon-binding domain of tRNA ABC2626 PF01476 LysM domain ABC2626 PF01476 LysM domain ABC2627 PF00202 Aminotransferase class-III ABC2628 PF00490 Delta-aminolevulinic acid dehydratase ABC2630 PF03900 Porphobilinogen deaminase, C-terminal domain ABC2630 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain ABC2631 PF01578 Cytochrome C assembly protein ABC2632 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain ABC2632 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain ABC2632 PF01488 Shikimate / quinate 5-dehydrogenase ABC2633 PF01926 50S ribosome-binding GTPase ABC2634 PF05362 Lon protease (S16) C-terminal proteolytic domain ABC2634 PF02190 ATP-dependent protease La (LON) substrate-binding domain ABC2634 PF00004 ATPase family associated with various cellular activities (AAA) ABC2635 PF05362 Lon protease (S16) C-terminal proteolytic domain ABC2635 PF00004 ATPase family associated with various cellular activities (AAA) ABC2636 PF07724 AAA domain (Cdc48 subfamily) ABC2636 PF06689 ClpX C4-type zinc finger ABC2636 PF10431 C-terminal, D2-small domain, of ClpB protein ABC2637 PF05698 Bacterial trigger factor protein (TF) C-terminus ABC2637 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase ABC2637 PF05697 Bacterial trigger factor protein (TF) ABC2639 PF00694 Aconitase C-terminal domain ABC2640 PF00330 Aconitase family (aconitate hydratase) ABC2641 PF00180 Isocitrate/isopropylmalate dehydrogenase ABC2642 PF00682 HMGL-like ABC2642 PF08502 LeuA allosteric (dimerisation) domain ABC2643 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain ABC2643 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain ABC2644 PF01842 ACT domain ABC2644 PF10369 Small subunit of acetolactate synthase ABC2645 PF00205 Thiamine pyrophosphate enzyme, central domain ABC2645 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain ABC2645 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain ABC2646 PF00920 Dehydratase family ABC2649 PF07732 Multicopper oxidase ABC2649 PF00394 Multicopper oxidase ABC2649 PF07731 Multicopper oxidase ABC2650 PF12850 Calcineurin-like phosphoesterase superfamily domain ABC2651 PF01725 Ham1 family ABC2652 PF01138 3' exoribonuclease family, domain 1 ABC2652 PF03725 3' exoribonuclease family, domain 2 ABC2653 PF10646 Sporulation and spore germination ABC2655 PF00037 4Fe-4S binding domain ABC2655 PF12800 4Fe-4S binding domain ABC2656 PF01177 Asp/Glu/Hydantoin racemase ABC2657 PF01047 MarR family ABC2658 PF05524 PEP-utilising enzyme, N-terminal ABC2658 PF00391 PEP-utilising enzyme, mobile domain ABC2658 PF02896 PEP-utilising enzyme, TIM barrel domain ABC2659 PF00381 PTS HPr component phosphorylation site ABC2660 PF00196 Bacterial regulatory proteins, luxR family ABC2661 PF03061 Thioesterase superfamily ABC2662 PF13085 2Fe-2S iron-sulfur cluster binding domain ABC2662 PF13183 4Fe-4S dicluster domain ABC2663 PF02910 Fumarate reductase flavoprotein C-term ABC2663 PF00890 FAD binding domain ABC2664 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit ABC2665 PF02386 Cation transport protein ABC2667 PF08459 UvrC Helix-hairpin-helix N-terminal ABC2667 PF01541 GIY-YIG catalytic domain ABC2667 PF02151 UvrB/uvrC motif ABC2668 PF00085 Thioredoxin ABC2669 PF00766 Electron transfer flavoprotein FAD-binding domain ABC2669 PF01012 Electron transfer flavoprotein domain ABC2670 PF01012 Electron transfer flavoprotein domain ABC2671 PF00378 Enoyl-CoA hydratase/isomerase ABC2672 PF08359 YsiA-like protein, C-terminal region ABC2672 PF00440 Bacterial regulatory proteins, tetR family ABC2673 PF00501 AMP-binding enzyme ABC2673 PF13193 AMP-binding enzyme C-terminal domain ABC2674 PF03994 Domain of Unknown Function (DUF350) ABC2675 PF00488 MutS domain V ABC2675 PF01713 Smr domain ABC2676 PF14716 Helix-hairpin-helix domain ABC2676 PF02811 PHP domain ABC2676 PF14791 DNA polymerase beta thumb ABC2677 PF02674 Colicin V production protein ABC2678 PF05164 Cell division protein ZapA ABC2679 PF03483 B3/4 domain ABC2679 PF03147 Ferredoxin-fold anticodon binding domain ABC2679 PF01588 Putative tRNA binding domain ABC2679 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain ABC2679 PF03484 tRNA synthetase B5 domain ABC2680 PF01409 tRNA synthetases class II core domain (F) ABC2680 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain ABC2681 PF08032 RNA 2'-O ribose methyltransferase substrate binding ABC2681 PF00588 SpoU rRNA Methylase family ABC2682 PF14098 Small, acid-soluble spore protein I ABC2683 PF05343 M42 glutamyl aminopeptidase ABC2685 PF00474 Sodium:solute symporter family ABC2686 PF04341 Protein of unknown function, DUF485 ABC2687 PF00453 Ribosomal protein L20 ABC2688 PF01632 Ribosomal protein L35 ABC2689 PF05198 Translation initiation factor IF-3, N-terminal domain ABC2689 PF00707 Translation initiation factor IF-3, C-terminal domain ABC2690 PF02687 FtsX-like permease family ABC2690 PF12704 MacB-like periplasmic core domain ABC2691 PF00005 ABC transporter ABC2694 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family ABC2696 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ABC2696 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ABC2697 PF03129 Anticodon binding domain ABC2697 PF02824 TGS domain ABC2697 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ABC2697 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ABC2699 PF04055 Radical SAM superfamily ABC2700 PF07319 Primosomal protein DnaI N-terminus ABC2700 PF01695 IstB-like ATP binding protein ABC2701 PF07261 Replication initiation and membrane attachment ABC2702 PF03477 ATP cone domain ABC2704 PF02675 S-adenosylmethionine decarboxylase ABC2705 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ABC2705 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ABC2706 PF01121 Dephospho-CoA kinase ABC2707 PF02659 Putative manganese efflux pump ABC2708 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain ABC2708 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain ABC2708 PF06827 Zinc finger found in FPG and IleRS ABC2709 PF00476 DNA polymerase family A ABC2709 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain ABC2709 PF01367 5'-3' exonuclease, C-terminal SAM fold ABC2710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABC2710 PF16736 Single Cache-like ABC2710 PF00512 His Kinase A (phospho-acceptor) domain ABC2710 PF00989 PAS fold ABC2711 PF00486 Transcriptional regulatory protein, C terminal ABC2711 PF00072 Response regulator receiver domain ABC2712 PF01037 Lrp/AsnC ligand binding domain ABC2713 PF00056 lactate/malate dehydrogenase, NAD binding domain ABC2713 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain ABC2714 PF00180 Isocitrate/isopropylmalate dehydrogenase ABC2715 PF00285 Citrate synthase, C-terminal domain ABC2716 PF04284 Protein of unknown function (DUF441) ABC2717 PF04186 FxsA cytoplasmic membrane protein ABC2718 PF00391 PEP-utilising enzyme, mobile domain ABC2718 PF00224 Pyruvate kinase, barrel domain ABC2718 PF02887 Pyruvate kinase, alpha/beta domain ABC2719 PF00365 Phosphofructokinase ABC2720 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit ABC2721 PF01039 Carboxyl transferase domain ABC2721 PF17848 Acetyl-coA carboxylase zinc finger domain ABC2722 PF07729 FCD domain ABC2722 PF00392 Bacterial regulatory proteins, gntR family ABC2723 PF00390 Malic enzyme, N-terminal domain ABC2723 PF03949 Malic enzyme, NAD binding domain ABC2724 PF17657 Bacterial DNA polymerase III alpha subunit finger domain ABC2724 PF01336 OB-fold nucleic acid binding domain ABC2724 PF02811 PHP domain ABC2724 PF14579 Helix-hairpin-helix motif ABC2724 PF07733 Bacterial DNA polymerase III alpha NTPase domain ABC2725 PF14034 Sporulation protein YtrH ABC2727 PF02272 DHHA1 domain ABC2727 PF01368 DHH family ABC2729 PF03061 Thioesterase superfamily ABC2729 PF07085 DRTGG domain ABC2729 PF00392 Bacterial regulatory proteins, gntR family ABC2729 PF00571 CBS domain ABC2732 PF01321 Creatinase/Prolidase N-terminal domain ABC2732 PF00557 Metallopeptidase family M24 ABC2736 PF14698 Argininosuccinate lyase C-terminal ABC2736 PF00206 Lyase ABC2737 PF00764 Arginosuccinate synthase ABC2739 PF01966 HD domain ABC2740 PF00871 Acetokinase family ABC2741 PF02384 N-6 DNA Methylase ABC2742 PF08534 Redoxin ABC2743 PF07690 Major Facilitator Superfamily ABC2744 PF09579 Sporulation protein YtfJ (Spore_YtfJ) ABC2746 PF06271 RDD family ABC2747 PF01343 Peptidase family S49 ABC2748 PF00269 Small, acid-soluble spore proteins, alpha/beta type ABC2749 PF02926 THUMP domain ABC2749 PF02568 Thiamine biosynthesis protein (ThiI) ABC2750 PF00266 Aminotransferase class-V ABC2751 PF06160 Septation ring formation regulator, EzrA ABC2752 PF02811 PHP domain ABC2753 PF00440 Bacterial regulatory proteins, tetR family ABC2756 PF13185 GAF domain ABC2757 PF01479 S4 domain ABC2757 PF00163 Ribosomal protein S4/S9 N-terminal domain ABC2758 PF00579 tRNA synthetases class I (W and Y) ABC2758 PF01479 S4 domain ABC2759 PF00905 Penicillin binding protein transpeptidase domain ABC2759 PF00912 Transglycosylase ABC2760 PF13193 AMP-binding enzyme C-terminal domain ABC2760 PF00501 AMP-binding enzyme ABC2761 PF00583 Acetyltransferase (GNAT) family ABC2762 PF00571 CBS domain ABC2763 PF00850 Histone deacetylase domain ABC2764 PF00356 Bacterial regulatory proteins, lacI family ABC2765 PF00793 DAHP synthetase I family ABC2765 PF01817 Chorismate mutase type II ABC2766 PF12732 YtxH-like protein ABC2767 PF06103 Bacterial protein of unknown function (DUF948) ABC2768 PF01225 Mur ligase family, catalytic domain ABC2768 PF02875 Mur ligase family, glutamate ligase domain ABC2768 PF08245 Mur ligase middle domain ABC2769 PF01580 FtsK/SpoIIIE family ABC2769 PF09397 Ftsk gamma domain ABC2769 PF17854 FtsK alpha domain ABC2770 PF01588 Putative tRNA binding domain ABC2770 PF14794 Domain of unknown function (DUF4479) ABC2771 PF07285 Protein of unknown function (DUF1444) ABC2772 PF00085 Thioredoxin ABC2774 PF11071 Nucleoside 2-deoxyribosyltransferase YtoQ ABC2775 PF01931 Protein of unknown function DUF84 ABC2776 PF05343 M42 glutamyl aminopeptidase ABC2778 PF02390 Putative methyltransferase ABC2780 PF01636 Phosphotransferase enzyme family ABC2781 PF01842 ACT domain ABC2781 PF00551 Formyl transferase ABC2784 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) ABC2784 PF00364 Biotin-requiring enzyme ABC2784 PF02817 e3 binding domain ABC2785 PF02779 Transketolase, pyrimidine binding domain ABC2785 PF02780 Transketolase, C-terminal domain ABC2786 PF00676 Dehydrogenase E1 component ABC2787 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABC2787 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ABC2788 PF02954 Bacterial regulatory protein, Fis family ABC2788 PF00158 Sigma-54 interaction domain ABC2788 PF13426 PAS domain ABC2789 PF04172 LrgB-like family ABC2790 PF03788 LrgA family ABC2792 PF00291 Pyridoxal-phosphate dependent enzyme ABC2793 PF06445 GyrI-like small molecule binding domain ABC2793 PF12833 Helix-turn-helix domain ABC2794 PF13411 MerR HTH family regulatory protein ABC2795 PF00106 short chain dehydrogenase ABC2796 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ABC2797 PF08220 DeoR-like helix-turn-helix domain ABC2798 PF00849 RNA pseudouridylate synthase ABC2798 PF01479 S4 domain ABC2799 PF01098 Cell cycle protein ABC2800 PF01098 Cell cycle protein ABC2801 PF14667 Polysaccharide biosynthesis C-terminal domain ABC2801 PF01943 Polysaccharide biosynthesis protein ABC2802 PF08450 SMP-30/Gluconolactonase/LRE-like region ABC2803 PF01894 Uncharacterised protein family UPF0047 ABC2804 PF07687 Peptidase dimerisation domain ABC2804 PF01546 Peptidase family M20/M25/M40 ABC2809 PF01068 ATP dependent DNA ligase domain ABC2815 PF05036 Sporulation related domain ABC2815 PF01520 N-acetylmuramoyl-L-alanine amidase ABC2816 PF04688 SPP1 phage holin ABC2822 PF12708 Pectate lyase superfamily protein ABC2822 PF11962 Peptidase_G2, IMC autoproteolytic cleavage domain ABC2824 PF01464 Transglycosylase SLT domain ABC2846 PF05866 Endodeoxyribonuclease RusA ABC2847 PF00692 dUTPase ABC2848 PF00436 Single-strand binding protein family ABC2849 PF00145 C-5 cytosine-specific DNA methylase ABC2851 PF03979 Sigma-70 factor, region 1.1 ABC2851 PF04539 Sigma-70 region 3 ABC2851 PF04542 Sigma-70 region 2 ABC2851 PF00140 Sigma-70 factor, region 1.2 ABC2851 PF04545 Sigma-70, region 4 ABC2855 PF08346 AntA/AntB antirepressor ABC2855 PF10548 P22AR C-terminal domain ABC2857 PF00067 Cytochrome P450 ABC2864 PF01726 LexA DNA binding domain ABC2864 PF00717 Peptidase S24-like ABC2865 PF02796 Helix-turn-helix domain of resolvase ABC2865 PF00239 Resolvase, N terminal domain ABC2871 PF08264 Anticodon-binding domain of tRNA ABC2871 PF13603 Leucyl-tRNA synthetase, Domain 2 ABC2871 PF00133 tRNA synthetases class I (I, L, M and V) ABC2871 PF09334 tRNA synthetases class I (M) ABC2872 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain ABC2872 PF00056 lactate/malate dehydrogenase, NAD binding domain ABC2873 PF07690 Major Facilitator Superfamily ABC2874 PF06962 Putative rRNA methylase ABC2875 PF00484 Carbonic anhydrase ABC2876 PF12146 Serine aminopeptidase, S33 ABC2877 PF00132 Bacterial transferase hexapeptide (six repeats) ABC2878 PF02773 S-adenosylmethionine synthetase, C-terminal domain ABC2878 PF02772 S-adenosylmethionine synthetase, central domain ABC2878 PF00438 S-adenosylmethionine synthetase, N-terminal domain ABC2879 PF01293 Phosphoenolpyruvate carboxykinase ABC2880 PF00326 Prolyl oligopeptidase family ABC2882 PF00005 ABC transporter ABC2883 PF00528 Binding-protein-dependent transport system inner membrane component ABC2884 PF00293 NUDIX domain ABC2885 PF07690 Major Facilitator Superfamily ABC2886 PF14183 YwpF-like protein ABC2888 PF00155 Aminotransferase class I and II ABC2889 PF01712 Deoxynucleoside kinase ABC2890 PF01712 Deoxynucleoside kinase ABC2893 PF00005 ABC transporter ABC2894 PF01032 FecCD transport family ABC2895 PF01032 FecCD transport family ABC2896 PF01569 PAP2 superfamily ABC2897 PF00375 Sodium:dicarboxylate symporter family ABC2900 PF07457 Protein of unknown function (DUF1516) ABC2901 PF07301 Protein of unknown function (DUF1453) ABC2902 PF01040 UbiA prenyltransferase family ABC2903 PF01368 DHH family ABC2903 PF02833 DHHA2 domain ABC2905 PF08868 YugN-like family ABC2906 PF00342 Phosphoglucose isomerase ABC2907 PF07478 D-ala D-ala ligase C-terminus ABC2907 PF01820 D-ala D-ala ligase N-terminus ABC2908 PF00465 Iron-containing alcohol dehydrogenase ABC2909 PF04070 Domain of unknown function (DUF378) ABC2910 PF00575 S1 RNA binding domain ABC2911 PF00271 Helicase conserved C-terminal domain ABC2911 PF00270 DEAD/DEAH box helicase ABC2912 PF02110 Hydroxyethylthiazole kinase family ABC2913 PF00155 Aminotransferase class I and II ABC2914 PF01037 Lrp/AsnC ligand binding domain ABC2915 PF02664 S-Ribosylhomocysteinase (LuxS) ABC2916 PF03631 Virulence factor BrkB ABC2917 PF00216 Bacterial DNA-binding protein ABC2918 PF13726 Na+-H+ antiporter family ABC2918 PF03553 Na+/H+ antiporter family ABC2920 PF02789 Cytosol aminopeptidase family, N-terminal domain ABC2920 PF00883 Cytosol aminopeptidase family, catalytic domain ABC2921 PF02681 Divergent PAP2 family ABC2922 PF06725 3D domain ABC2923 PF14068 Putative membrane protein ABC2924 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABC2925 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABC2926 PF08125 Mannitol dehydrogenase C-terminal domain ABC2926 PF01232 Mannitol dehydrogenase Rossmann domain ABC2927 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ABC2928 PF08279 HTH domain ABC2928 PF00874 PRD domain ABC2928 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ABC2928 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ABC2928 PF05043 Mga helix-turn-helix domain ABC2929 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ABC2929 PF02378 Phosphotransferase system, EIIC ABC2930 PF00497 Bacterial extracellular solute-binding proteins, family 3 ABC2931 PF00528 Binding-protein-dependent transport system inner membrane component ABC2932 PF01521 Iron-sulphur cluster biosynthesis ABC2933 PF04055 Radical SAM superfamily ABC2934 PF01678 Diaminopimelate epimerase ABC2936 PF07293 Protein of unknown function (DUF1450) ABC2937 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABC2938 PF07315 Protein of unknown function (DUF1462) ABC2939 PF01106 NifU-like domain ABC2940 PF00288 GHMP kinases N terminal domain ABC2940 PF08544 GHMP kinases C terminal ABC2941 PF00291 Pyridoxal-phosphate dependent enzyme ABC2942 PF00742 Homoserine dehydrogenase ABC2942 PF03447 Homoserine dehydrogenase, NAD binding domain ABC2942 PF01842 ACT domain ABC2944 PF04608 Phosphatidylglycerophosphatase A ABC2945 PF13344 Haloacid dehalogenase-like hydrolase ABC2946 PF01934 Protein of unknown function DUF86 ABC2948 PF06265 Protein of unknown function (DUF1027) ABC2949 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) ABC2950 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family ABC2950 PF04055 Radical SAM superfamily ABC2951 PF01551 Peptidase family M23 ABC2952 PF03553 Na+/H+ antiporter family ABC2953 PF09560 Sporulation protein YunB (Spo_YunB) ABC2954 PF00186 Dihydrofolate reductase ABC2955 PF00303 Thymidylate synthase ABC2956 PF08827 Domain of unknown function (DUF1805) ABC2957 PF02872 5'-nucleotidase, C-terminal domain ABC2958 PF01925 Sulfite exporter TauE/SafE ABC2959 PF01904 Protein of unknown function DUF72 ABC2967 PF01497 Periplasmic binding protein ABC2968 PF12833 Helix-turn-helix domain ABC2968 PF01497 Periplasmic binding protein ABC2969 PF00248 Aldo/keto reductase family ABC2970 PF08241 Methyltransferase domain ABC2971 PF00232 Glycosyl hydrolase family 1 ABC2972 PF00874 PRD domain ABC2972 PF03123 CAT RNA binding domain ABC2973 PF00463 Isocitrate lyase family ABC2974 PF01458 Uncharacterized protein family (UPF0051) ABC2975 PF01592 NifU-like N terminal domain ABC2976 PF00266 Aminotransferase class-V ABC2977 PF01458 Uncharacterized protein family (UPF0051) ABC2978 PF00005 ABC transporter ABC2980 PF02627 Carboxymuconolactone decarboxylase family ABC2981 PF01497 Periplasmic binding protein ABC2983 PF03180 NLPA lipoprotein ABC2984 PF00528 Binding-protein-dependent transport system inner membrane component ABC2985 PF09383 NIL domain ABC2985 PF00005 ABC transporter ABC2986 PF01597 Glycine cleavage H-protein ABC2987 PF03960 ArsC family ABC2988 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABC2988 PF02770 Acyl-CoA dehydrogenase, middle domain ABC2988 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABC2989 PF02803 Thiolase, C-terminal domain ABC2989 PF00108 Thiolase, N-terminal domain ABC2990 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ABC2990 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ABC2990 PF00378 Enoyl-CoA hydratase/isomerase ABC2992 PF12793 Sugar transport-related sRNA regulator N-term ABC2992 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ABC2994 PF11738 Protein of unknown function (DUF3298) ABC2994 PF13739 Deacetylase PdaC ABC2994 PF01522 Polysaccharide deacetylase ABC2996 PF01674 Lipase (class 2) ABC3002 PF01668 SmpB protein ABC3003 PF07681 DoxX ABC3004 PF08206 Ribonuclease B OB domain ABC3004 PF00575 S1 RNA binding domain ABC3004 PF00773 RNB domain ABC3004 PF17876 Cold shock domain ABC3005 PF12146 Serine aminopeptidase, S33 ABC3006 PF12146 Serine aminopeptidase, S33 ABC3007 PF00296 Luciferase-like monooxygenase ABC3008 PF03840 Preprotein translocase SecG subunit ABC3010 PF01970 Tripartite tricarboxylate transporter TctA family ABC3013 PF13378 Enolase C-terminal domain-like ABC3013 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain ABC3014 PF00171 Aldehyde dehydrogenase family ABC3015 PF00701 Dihydrodipicolinate synthetase family ABC3016 PF00392 Bacterial regulatory proteins, gntR family ABC3016 PF07729 FCD domain ABC3017 PF00113 Enolase, C-terminal TIM barrel domain ABC3017 PF03952 Enolase, N-terminal domain ABC3018 PF06415 BPG-independent PGAM N-terminus (iPGM_N) ABC3018 PF01676 Metalloenzyme superfamily ABC3019 PF00121 Triosephosphate isomerase ABC3020 PF00162 Phosphoglycerate kinase ABC3021 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain ABC3021 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain ABC3022 PF04198 Putative sugar-binding domain ABC3023 PF18801 response regulator aspartate phosphatase H, N terminal ABC3025 PF04552 Sigma-54, DNA binding domain ABC3025 PF00309 Sigma-54 factor, Activator interacting domain (AID) ABC3025 PF04963 Sigma-54 factor, core binding domain ABC3026 PF00574 Clp protease ABC3027 PF01546 Peptidase family M20/M25/M40 ABC3027 PF07687 Peptidase dimerisation domain ABC3029 PF00005 ABC transporter ABC3029 PF00571 CBS domain ABC3030 PF00528 Binding-protein-dependent transport system inner membrane component ABC3031 PF04069 Substrate binding domain of ABC-type glycine betaine transport system ABC3032 PF00528 Binding-protein-dependent transport system inner membrane component ABC3033 PF00381 PTS HPr component phosphorylation site ABC3034 PF14527 WhiA LAGLIDADG-like domain ABC3034 PF10298 WhiA N-terminal LAGLIDADG-like domain ABC3034 PF02650 WhiA C-terminal HTH domain ABC3035 PF01933 Uncharacterised protein family UPF0052 ABC3036 PF03668 P-loop ATPase protein family ABC3037 PF00293 NUDIX domain ABC3038 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABC3040 PF00067 Cytochrome P450 ABC3043 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase ABC3043 PF01502 Phosphoribosyl-AMP cyclohydrolase ABC3044 PF00977 Histidine biosynthesis protein ABC3045 PF00977 Histidine biosynthesis protein ABC3046 PF00117 Glutamine amidotransferase class-I ABC3047 PF00475 Imidazoleglycerol-phosphate dehydratase ABC3049 PF01634 ATP phosphoribosyltransferase ABC3050 PF13393 Histidyl-tRNA synthetase ABC3051 PF14602 Hexapeptide repeat of succinyl-transferase ABC3052 PF13419 Haloacid dehalogenase-like hydrolase ABC3053 PF07670 Nucleoside recognition ABC3054 PF01790 Prolipoprotein diacylglyceryl transferase ABC3055 PF07475 HPr Serine kinase C-terminal domain ABC3055 PF02603 HPr Serine kinase N terminus ABC3056 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV ABC3057 PF13349 Putative adhesin ABC3058 PF17755 UvrA DNA-binding domain ABC3058 PF17760 UvrA interaction domain ABC3059 PF00271 Helicase conserved C-terminal domain ABC3059 PF04851 Type III restriction enzyme, res subunit ABC3059 PF02151 UvrB/uvrC motif ABC3059 PF12344 Ultra-violet resistance protein B ABC3059 PF17757 UvrB interaction domain ABC3060 PF00892 EamA-like transporter family ABC3061 PF17820 PDZ domain ABC3062 PF17820 PDZ domain ABC3062 PF01471 Putative peptidoglycan binding domain ABC3062 PF03572 Peptidase family S41 ABC3063 PF08525 Opacity-associated protein A N-terminal motif ABC3063 PF01551 Peptidase family M23 ABC3063 PF01476 LysM domain ABC3064 PF02687 FtsX-like permease family ABC3064 PF18075 FtsX extracellular domain ABC3065 PF00005 ABC transporter ABC3066 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 ABC3066 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) ABC3067 PF03462 PCRF domain ABC3067 PF00472 RF-1 domain ABC3068 PF07517 SecA DEAD-like domain ABC3068 PF01043 SecA preprotein cross-linking domain ABC3068 PF02810 SEC-C motif ABC3068 PF07516 SecA Wing and Scaffold domain ABC3069 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein ABC3069 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus ABC3070 PF00313 'Cold-shock' DNA-binding domain ABC3073 PF02561 Flagellar protein FliS ABC3074 PF02465 Flagellar hook-associated protein 2 N-terminus ABC3074 PF07195 Flagellar hook-associated protein 2 C-terminus ABC3075 PF03646 FlaG protein ABC3076 PF02599 Global regulator protein family ABC3077 PF02623 FliW protein ABC3078 PF00700 Bacterial flagellin C-terminal helical region ABC3078 PF00669 Bacterial flagellin N-terminal helical region ABC3079 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ABC3079 PF00460 Flagella basal body rod protein ABC3081 PF04316 Anti-sigma-28 factor, FlgM ABC3084 PF04851 Type III restriction enzyme, res subunit ABC3084 PF00271 Helicase conserved C-terminal domain ABC3085 PF02645 Uncharacterised protein, DegV family COG1307 ABC3086 PF00072 Response regulator receiver domain ABC3086 PF00196 Bacterial regulatory proteins, luxR family ABC3087 PF05384 Sensor protein DegS ABC3087 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABC3087 PF07730 Histidine kinase ABC3088 PF01205 Uncharacterized protein family UPF0029 ABC3088 PF09186 Domain of unknown function (DUF1949) ABC3089 PF01470 Pyroglutamyl peptidase ABC3090 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ABC3091 PF00528 Binding-protein-dependent transport system inner membrane component ABC3092 PF00528 Binding-protein-dependent transport system inner membrane component ABC3093 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ABC3093 PF00005 ABC transporter ABC3094 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ABC3094 PF00005 ABC transporter ABC3096 PF03816 Cell envelope-related transcriptional attenuator domain ABC3097 PF05036 Sporulation related domain ABC3097 PF08239 Bacterial SH3 domain ABC3097 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase ABC3098 PF00483 Nucleotidyl transferase ABC3099 PF00535 Glycosyl transferase family 2 ABC3099 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ABC3100 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ABC3100 PF00535 Glycosyl transferase family 2 ABC3101 PF01467 Cytidylyltransferase-like ABC3103 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ABC3104 PF02397 Bacterial sugar transferase ABC3107 PF07972 NrdI Flavodoxin like ABC3108 PF00317 Ribonucleotide reductase, all-alpha domain ABC3108 PF08343 Ribonucleotide reductase N-terminal ABC3108 PF02867 Ribonucleotide reductase, barrel domain ABC3109 PF00268 Ribonucleotide reductase, small chain ABC3111 PF00857 Isochorismatase family ABC3113 PF00704 Glycosyl hydrolases family 18 ABC3113 PF01476 LysM domain ABC3115 PF00251 Glycosyl hydrolases family 32 N-terminal domain ABC3115 PF08244 Glycosyl hydrolases family 32 C terminal ABC3116 PF00251 Glycosyl hydrolases family 32 N-terminal domain ABC3116 PF08244 Glycosyl hydrolases family 32 C terminal ABC3118 PF00528 Binding-protein-dependent transport system inner membrane component ABC3119 PF00528 Binding-protein-dependent transport system inner membrane component ABC3120 PF00356 Bacterial regulatory proteins, lacI family ABC3122 PF00005 ABC transporter ABC3122 PF17912 MalK OB fold domain ABC3122 PF03459 TOBE domain ABC3123 PF00528 Binding-protein-dependent transport system inner membrane component ABC3124 PF00528 Binding-protein-dependent transport system inner membrane component ABC3126 PF00933 Glycosyl hydrolase family 3 N terminal domain ABC3126 PF01915 Glycosyl hydrolase family 3 C-terminal domain ABC3127 PF01381 Helix-turn-helix ABC3132 PF00392 Bacterial regulatory proteins, gntR family ABC3133 PF00005 ABC transporter ABC3136 PF01081 KDPG and KHG aldolase ABC3138 PF02082 Transcriptional regulator ABC3141 PF13185 GAF domain ABC3141 PF07730 Histidine kinase ABC3142 PF00072 Response regulator receiver domain ABC3142 PF00196 Bacterial regulatory proteins, luxR family ABC3144 PF02547 Queuosine biosynthesis protein ABC3145 PF00106 short chain dehydrogenase ABC3147 PF13280 WYL domain ABC3147 PF08279 HTH domain ABC3148 PF05163 DinB family ABC3150 PF14572 Phosphoribosyl synthetase-associated domain ABC3150 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase ABC3151 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ABC3151 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ABC3152 PF00730 HhH-GPD superfamily base excision DNA repair protein ABC3152 PF07934 8-oxoguanine DNA glycosylase, N-terminal domain ABC3153 PF02805 Metal binding domain of Ada ABC3153 PF12833 Helix-turn-helix domain ABC3154 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain ABC3154 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain ABC3161 PF01467 Cytidylyltransferase-like ABC3163 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ABC3163 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ABC3164 PF00953 Glycosyl transferase family 4 ABC3165 PF00535 Glycosyl transferase family 2 ABC3167 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ABC3167 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ABC3167 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ABC3170 PF13439 Glycosyltransferase Family 4 ABC3174 PF02777 Iron/manganese superoxide dismutases, C-terminal domain ABC3174 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain ABC3176 PF00037 4Fe-4S binding domain ABC3176 PF12800 4Fe-4S binding domain ABC3177 PF01797 Transposase IS200 like ABC3178 PF01546 Peptidase family M20/M25/M40 ABC3178 PF07687 Peptidase dimerisation domain ABC3179 PF03806 AbgT putative transporter family ABC3180 PF01546 Peptidase family M20/M25/M40 ABC3182 PF00194 Eukaryotic-type carbonic anhydrase ABC3183 PF00291 Pyridoxal-phosphate dependent enzyme ABC3185 PF00005 ABC transporter ABC3187 PF08359 YsiA-like protein, C-terminal region ABC3187 PF00440 Bacterial regulatory proteins, tetR family ABC3188 PF03358 NADPH-dependent FMN reductase ABC3189 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABC3189 PF03466 LysR substrate binding domain ABC3193 PF04608 Phosphatidylglycerophosphatase A ABC3195 PF01116 Fructose-bisphosphate aldolase class-II ABC3196 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ABC3196 PF02378 Phosphotransferase system, EIIC ABC3196 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ABC3197 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ABC3197 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ABC3198 PF00294 pfkB family carbohydrate kinase ABC3199 PF01380 SIS domain ABC3199 PF01418 Helix-turn-helix domain, rpiR family ABC3200 PF00582 Universal stress protein family ABC3205 PF01156 Inosine-uridine preferring nucleoside hydrolase ABC3206 PF00528 Binding-protein-dependent transport system inner membrane component ABC3207 PF00528 Binding-protein-dependent transport system inner membrane component ABC3209 PF01979 Amidohydrolase family ABC3209 PF13382 Adenine deaminase C-terminal domain ABC3214 PF00528 Binding-protein-dependent transport system inner membrane component ABC3216 PF00478 IMP dehydrogenase / GMP reductase domain ABC3217 PF00884 Sulfatase ABC3218 PF00455 DeoR C terminal sensor domain ABC3218 PF08220 DeoR-like helix-turn-helix domain ABC3219 PF10509 Galactokinase galactose-binding signature ABC3219 PF08544 GHMP kinases C terminal ABC3219 PF00288 GHMP kinases N terminal domain ABC3220 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain ABC3220 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain ABC3221 PF04072 Leucine carboxyl methyltransferase ABC3223 PF07690 Major Facilitator Superfamily ABC3224 PF01546 Peptidase family M20/M25/M40 ABC3225 PF00480 ROK family ABC3227 PF00486 Transcriptional regulatory protein, C terminal ABC3227 PF00072 Response regulator receiver domain ABC3228 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABC3229 PF00005 ABC transporter ABC3230 PF02687 FtsX-like permease family ABC3231 PF00403 Heavy-metal-associated domain ABC3233 PF13936 Helix-turn-helix domain ABC3233 PF04198 Putative sugar-binding domain ABC3235 PF07663 Sorbitol phosphotransferase enzyme II C-terminus ABC3235 PF03612 Sorbitol phosphotransferase enzyme II N-terminus ABC3236 PF03608 PTS system enzyme II sorbitol-specific factor ABC3239 PF00381 PTS HPr component phosphorylation site ABC3242 PF01047 MarR family ABC3243 PF00583 Acetyltransferase (GNAT) family ABC3245 PF00528 Binding-protein-dependent transport system inner membrane component ABC3246 PF00005 ABC transporter ABC3247 PF13183 4Fe-4S dicluster domain ABC3247 PF02754 Cysteine-rich domain ABC3248 PF02913 FAD linked oxidases, C-terminal domain ABC3248 PF01565 FAD binding domain ABC3249 PF13556 PucR C-terminal helix-turn-helix domain ABC3249 PF17853 GGDEF-like domain ABC3249 PF05651 Putative sugar diacid recognition ABC3250 PF11700 Vacuole effluxer Atg22 like ABC3251 PF02673 Bacitracin resistance protein BacA ABC3252 PF18801 response regulator aspartate phosphatase H, N terminal ABC3253 PF01238 Phosphomannose isomerase type I ABC3255 PF13193 AMP-binding enzyme C-terminal domain ABC3255 PF00501 AMP-binding enzyme ABC3259 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain ABC3259 PF17770 Ribonuclease J C-terminal domain ABC3259 PF00753 Metallo-beta-lactamase superfamily ABC3260 PF00528 Binding-protein-dependent transport system inner membrane component ABC3262 PF08402 TOBE domain ABC3262 PF00005 ABC transporter ABC3263 PF03466 LysR substrate binding domain ABC3263 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABC3266 PF00440 Bacterial regulatory proteins, tetR family ABC3266 PF17932 Tetracyclin repressor-like, C-terminal domain ABC3268 PF13229 Right handed beta helix region ABC3269 PF00293 NUDIX domain ABC3270 PF00872 Transposase, Mutator family ABC3272 PF00528 Binding-protein-dependent transport system inner membrane component ABC3273 PF00528 Binding-protein-dependent transport system inner membrane component ABC3273 PF14785 Maltose transport system permease protein MalF P2 domain ABC3274 PF07470 Glycosyl Hydrolase Family 88 ABC3275 PF12833 Helix-turn-helix domain ABC3276 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ABC3276 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ABC3278 PF12833 Helix-turn-helix domain ABC3278 PF06445 GyrI-like small molecule binding domain ABC3280 PF00528 Binding-protein-dependent transport system inner membrane component ABC3281 PF00528 Binding-protein-dependent transport system inner membrane component ABC3282 PF13416 Bacterial extracellular solute-binding protein ABC3283 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ABC3283 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ABC3285 PF02311 AraC-like ligand binding domain ABC3285 PF12833 Helix-turn-helix domain ABC3286 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ABC3286 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ABC3288 PF02567 Phenazine biosynthesis-like protein ABC3291 PF02660 Glycerol-3-phosphate acyltransferase ABC3292 PF00266 Aminotransferase class-V ABC3293 PF00884 Sulfatase ABC3295 PF04122 Putative cell wall binding repeat 2 ABC3295 PF01520 N-acetylmuramoyl-L-alanine amidase ABC3296 PF10026 Predicted Zn-dependent protease (DUF2268) ABC3297 PF01435 Peptidase family M48 ABC3299 PF00528 Binding-protein-dependent transport system inner membrane component ABC3300 PF00528 Binding-protein-dependent transport system inner membrane component ABC3301 PF01547 Bacterial extracellular solute-binding protein ABC3305 PF00583 Acetyltransferase (GNAT) family ABC3308 PF04226 Transglycosylase associated protein ABC3310 PF03129 Anticodon binding domain ABC3310 PF13393 Histidyl-tRNA synthetase ABC3311 PF01966 HD domain ABC3321 PF01966 HD domain ABC3323 PF18801 response regulator aspartate phosphatase H, N terminal ABC3327 PF01979 Amidohydrolase family ABC3328 PF01546 Peptidase family M20/M25/M40 ABC3328 PF07687 Peptidase dimerisation domain ABC3329 PF01979 Amidohydrolase family ABC3330 PF01175 Urocanase Rossmann-like domain ABC3330 PF17391 Urocanase N-terminal domain ABC3330 PF17392 Urocanase C-terminal domain ABC3333 PF07730 Histidine kinase ABC3333 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABC3334 PF00196 Bacterial regulatory proteins, luxR family ABC3334 PF00072 Response regulator receiver domain ABC3336 PF03123 CAT RNA binding domain ABC3336 PF00874 PRD domain ABC3337 PF02378 Phosphotransferase system, EIIC ABC3337 PF00367 phosphotransferase system, EIIB ABC3338 PF02016 LD-carboxypeptidase N-terminal domain ABC3338 PF17676 LD-carboxypeptidase C-terminal domain ABC3339 PF07563 Protein of unknown function (DUF1541) ABC3341 PF16326 ABC transporter C-terminal domain ABC3341 PF00005 ABC transporter ABC3341 PF12848 ABC transporter ABC3342 PF00107 Zinc-binding dehydrogenase ABC3342 PF08240 Alcohol dehydrogenase GroES-like domain ABC3344 PF08240 Alcohol dehydrogenase GroES-like domain ABC3344 PF00107 Zinc-binding dehydrogenase ABC3345 PF03611 PTS system sugar-specific permease component ABC3346 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ABC3351 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family ABC3352 PF00294 pfkB family carbohydrate kinase ABC3353 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) ABC3354 PF01380 SIS domain ABC3355 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component ABC3358 PF00356 Bacterial regulatory proteins, lacI family ABC3359 PF03551 Transcriptional regulator PadR-like family ABC3364 PF03819 MazG nucleotide pyrophosphohydrolase domain ABC3365 PF00005 ABC transporter ABC3366 PF01061 ABC-2 type transporter ABC3368 PF00690 Cation transporter/ATPase, N-terminus ABC3368 PF00689 Cation transporting ATPase, C-terminus ABC3369 PF16369 C-terminal lipocalin-like domain ABC3369 PF04616 Glycosyl hydrolases family 43 ABC3371 PF06964 Alpha-L-arabinofuranosidase C-terminal domain ABC3373 PF00528 Binding-protein-dependent transport system inner membrane component ABC3374 PF00196 Bacterial regulatory proteins, luxR family ABC3374 PF00072 Response regulator receiver domain ABC3375 PF07730 Histidine kinase ABC3375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABC3375 PF00672 HAMP domain ABC3382 PF00356 Bacterial regulatory proteins, lacI family ABC3383 PF00230 Major intrinsic protein ABC3384 PF00370 FGGY family of carbohydrate kinases, N-terminal domain ABC3384 PF02782 FGGY family of carbohydrate kinases, C-terminal domain ABC3387 PF00080 Copper/zinc superoxide dismutase (SODC) ABC3388 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain ABC3388 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain ABC3389 PF01545 Cation efflux family ABC3389 PF16916 Dimerisation domain of Zinc Transporter ABC3390 PF01022 Bacterial regulatory protein, arsR family ABC3391 PF03466 LysR substrate binding domain ABC3391 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABC3392 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase ABC3392 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain ABC3393 PF00528 Binding-protein-dependent transport system inner membrane component ABC3394 PF09084 NMT1/THI5 like ABC3395 PF00296 Luciferase-like monooxygenase ABC3396 PF00005 ABC transporter ABC3399 PF03358 NADPH-dependent FMN reductase ABC3400 PF03466 LysR substrate binding domain ABC3400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABC3402 PF04239 Protein of unknown function (DUF421) ABC3403 PF00269 Small, acid-soluble spore proteins, alpha/beta type ABC3404 PF00269 Small, acid-soluble spore proteins, alpha/beta type ABC3405 PF00873 AcrB/AcrD/AcrF family ABC3406 PF00440 Bacterial regulatory proteins, tetR family ABC3408 PF00005 ABC transporter ABC3411 PF02602 Uroporphyrinogen-III synthase HemD ABC3413 PF08240 Alcohol dehydrogenase GroES-like domain ABC3413 PF00107 Zinc-binding dehydrogenase ABC3413 PF13823 Alcohol dehydrogenase GroES-associated ABC3414 PF00753 Metallo-beta-lactamase superfamily ABC3415 PF05067 Manganese containing catalase ABC3417 PF04069 Substrate binding domain of ABC-type glycine betaine transport system ABC3418 PF03471 Transporter associated domain ABC3418 PF01595 Cyclin M transmembrane N-terminal domain ABC3418 PF00571 CBS domain ABC3419 PF04203 Sortase domain ABC3420 PF00005 ABC transporter ABC3421 PF01032 FecCD transport family ABC3422 PF01497 Periplasmic binding protein ABC3423 PF05031 Iron Transport-associated domain ABC3424 PF05031 Iron Transport-associated domain ABC3425 PF03992 Antibiotic biosynthesis monooxygenase ABC3426 PF01032 FecCD transport family ABC3427 PF01497 Periplasmic binding protein ABC3428 PF00107 Zinc-binding dehydrogenase ABC3428 PF08240 Alcohol dehydrogenase GroES-like domain ABC3428 PF13823 Alcohol dehydrogenase GroES-associated ABC3429 PF01209 ubiE/COQ5 methyltransferase family ABC3430 PF00440 Bacterial regulatory proteins, tetR family ABC3430 PF16859 Tetracyclin repressor-like, C-terminal domain ABC3431 PF07690 Major Facilitator Superfamily ABC3432 PF01797 Transposase IS200 like ABC3433 PF07690 Major Facilitator Superfamily ABC3435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABC3435 PF03466 LysR substrate binding domain ABC3436 PF00561 alpha/beta hydrolase fold ABC3438 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ABC3438 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ABC3439 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ABC3439 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ABC3440 PF00528 Binding-protein-dependent transport system inner membrane component ABC3441 PF00528 Binding-protein-dependent transport system inner membrane component ABC3442 PF01547 Bacterial extracellular solute-binding protein ABC3443 PF01325 Iron dependent repressor, N-terminal DNA binding domain ABC3443 PF00480 ROK family ABC3444 PF04235 Protein of unknown function (DUF418) ABC3445 PF08863 YolD-like protein ABC3448 PF01520 N-acetylmuramoyl-L-alanine amidase ABC3449 PF10431 C-terminal, D2-small domain, of ClpB protein ABC3449 PF00004 ATPase family associated with various cellular activities (AAA) ABC3449 PF07724 AAA domain (Cdc48 subfamily) ABC3449 PF17871 AAA lid domain ABC3455 PF02586 SOS response associated peptidase (SRAP) ABC3456 PF04294 VanW like protein ABC3460 PF00440 Bacterial regulatory proteins, tetR family ABC3460 PF13977 BetI-type transcriptional repressor, C-terminal ABC3461 PF01740 STAS domain ABC3462 PF01225 Mur ligase family, catalytic domain ABC3462 PF02875 Mur ligase family, glutamate ligase domain ABC3462 PF08245 Mur ligase middle domain ABC3466 PF00072 Response regulator receiver domain ABC3466 PF00196 Bacterial regulatory proteins, luxR family ABC3468 PF01261 Xylose isomerase-like TIM barrel ABC3469 PF00528 Binding-protein-dependent transport system inner membrane component ABC3470 PF00528 Binding-protein-dependent transport system inner membrane component ABC3472 PF01408 Oxidoreductase family, NAD-binding Rossmann fold ABC3472 PF02894 Oxidoreductase family, C-terminal alpha/beta domain ABC3473 PF00356 Bacterial regulatory proteins, lacI family ABC3475 PF12833 Helix-turn-helix domain ABC3476 PF01497 Periplasmic binding protein ABC3477 PF00248 Aldo/keto reductase family ABC3478 PF00356 Bacterial regulatory proteins, lacI family ABC3479 PF00672 HAMP domain ABC3479 PF02743 Cache domain ABC3479 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABC3481 PF00905 Penicillin binding protein transpeptidase domain ABC3483 PF07687 Peptidase dimerisation domain ABC3483 PF01546 Peptidase family M20/M25/M40 ABC3484 PF00756 Putative esterase ABC3485 PF01032 FecCD transport family ABC3486 PF01032 FecCD transport family ABC3487 PF01497 Periplasmic binding protein ABC3488 PF12833 Helix-turn-helix domain ABC3488 PF01497 Periplasmic binding protein ABC3489 PF05721 Phytanoyl-CoA dioxygenase (PhyH) ABC3491 PF03323 Bacillus/Clostridium GerA spore germination protein ABC3492 PF03845 Spore germination protein ABC3494 PF02687 FtsX-like permease family ABC3495 PF00005 ABC transporter ABC3496 PF01547 Bacterial extracellular solute-binding protein ABC3497 PF00528 Binding-protein-dependent transport system inner membrane component ABC3498 PF00528 Binding-protein-dependent transport system inner membrane component ABC3501 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 ABC3502 PF00365 Phosphofructokinase ABC3504 PF03611 PTS system sugar-specific permease component ABC3505 PF01116 Fructose-bisphosphate aldolase class-II ABC3506 PF01965 DJ-1/PfpI family ABC3508 PF00398 Ribosomal RNA adenine dimethylase ABC3510 PF13411 MerR HTH family regulatory protein ABC3511 PF02142 MGS-like domain ABC3511 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain ABC3511 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain ABC3512 PF01546 Peptidase family M20/M25/M40 ABC3512 PF07687 Peptidase dimerisation domain ABC3515 PF18801 response regulator aspartate phosphatase H, N terminal ABC3516 PF08533 Beta-galactosidase C-terminal domain ABC3516 PF02449 Beta-galactosidase ABC3516 PF08532 Beta-galactosidase trimerisation domain ABC3517 PF07745 Glycosyl hydrolase family 53 ABC3518 PF00528 Binding-protein-dependent transport system inner membrane component ABC3519 PF00528 Binding-protein-dependent transport system inner membrane component ABC3520 PF13416 Bacterial extracellular solute-binding protein ABC3521 PF00356 Bacterial regulatory proteins, lacI family ABC3525 PF00892 EamA-like transporter family ABC3526 PF11495 Archaeal transcriptional regulator TrmB ABC3526 PF01978 Sugar-specific transcriptional regulator TrmB ABC3528 PF00005 ABC transporter ABC3529 PF12833 Helix-turn-helix domain ABC3533 PF02743 Cache domain ABC3533 PF00672 HAMP domain ABC3533 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABC3534 PF05139 Erythromycin esterase ABC3535 PF03734 L,D-transpeptidase catalytic domain ABC3535 PF01476 LysM domain ABC3541 PF00106 short chain dehydrogenase ABC3544 PF13407 Periplasmic binding protein domain ABC3545 PF02653 Branched-chain amino acid transport system / permease component ABC3546 PF00005 ABC transporter ABC3547 PF05025 RbsD / FucU transport protein family ABC3548 PF00294 pfkB family carbohydrate kinase ABC3549 PF00356 Bacterial regulatory proteins, lacI family ABC3550 PF01156 Inosine-uridine preferring nucleoside hydrolase ABC3552 PF00672 HAMP domain ABC3552 PF00512 His Kinase A (phospho-acceptor) domain ABC3552 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABC3553 PF00486 Transcriptional regulatory protein, C terminal ABC3553 PF00072 Response regulator receiver domain ABC3556 PF00005 ABC transporter ABC3557 PF02441 Flavoprotein ABC3558 PF05147 Lanthionine synthetase C-like protein ABC3559 PF14028 Lantibiotic biosynthesis dehydratase C-term ABC3559 PF04738 Lantibiotic dehydratase, N terminus ABC3561 PF00664 ABC transporter transmembrane region ABC3561 PF00005 ABC transporter ABC3562 PF02915 Rubrerythrin ABC3563 PF01381 Helix-turn-helix ABC3565 PF04203 Sortase domain ABC3568 PF01116 Fructose-bisphosphate aldolase class-II ABC3569 PF08240 Alcohol dehydrogenase GroES-like domain ABC3569 PF00107 Zinc-binding dehydrogenase ABC3570 PF03611 PTS system sugar-specific permease component ABC3571 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ABC3573 PF08220 DeoR-like helix-turn-helix domain ABC3573 PF00455 DeoR C terminal sensor domain ABC3579 PF01380 SIS domain ABC3579 PF01418 Helix-turn-helix domain, rpiR family ABC3580 PF00367 phosphotransferase system, EIIB ABC3580 PF02378 Phosphotransferase system, EIIC ABC3581 PF11975 Family 4 glycosyl hydrolase C-terminal domain ABC3581 PF02056 Family 4 glycosyl hydrolase ABC3582 PF01134 Glucose inhibited division protein A ABC3582 PF13932 GidA associated domain ABC3583 PF00528 Binding-protein-dependent transport system inner membrane component ABC3585 PF13416 Bacterial extracellular solute-binding protein ABC3586 PF00672 HAMP domain ABC3586 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABC3586 PF02743 Cache domain ABC3586 PF06580 Histidine kinase ABC3587 PF00072 Response regulator receiver domain ABC3587 PF12833 Helix-turn-helix domain ABC3591 PF09827 CRISPR associated protein Cas2 ABC3592 PF01867 CRISPR associated protein Cas1 ABC3598 PF01177 Asp/Glu/Hydantoin racemase ABC3599 PF02028 BCCT, betaine/carnitine/choline family transporter ABC3601 PF05360 yiaA/B two helix domain ABC3602 PF00356 Bacterial regulatory proteins, lacI family ABC3603 PF00294 pfkB family carbohydrate kinase ABC3604 PF01970 Tripartite tricarboxylate transporter TctA family ABC3607 PF00701 Dihydrodipicolinate synthetase family ABC3608 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded ABC3609 PF02733 Dak1 domain ABC3609 PF02734 DAK2 domain ABC3610 PF02733 Dak1 domain ABC3611 PF02502 Ribose/Galactose Isomerase ABC3612 PF00455 DeoR C terminal sensor domain ABC3612 PF08220 DeoR-like helix-turn-helix domain ABC3614 PF00107 Zinc-binding dehydrogenase ABC3614 PF08240 Alcohol dehydrogenase GroES-like domain ABC3615 PF07690 Major Facilitator Superfamily ABC3618 PF00501 AMP-binding enzyme ABC3618 PF13193 AMP-binding enzyme C-terminal domain ABC3621 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component ABC3622 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component ABC3623 PF03480 Bacterial extracellular solute-binding protein, family 7 ABC3625 PF18801 response regulator aspartate phosphatase H, N terminal ABC3627 PF05067 Manganese containing catalase ABC3628 PF04439 Streptomycin adenylyltransferase ABC3630 PF01979 Amidohydrolase family ABC3631 PF01638 HxlR-like helix-turn-helix ABC3632 PF02678 Pirin ABC3632 PF05726 Pirin C-terminal cupin domain ABC3633 PF16925 Tetracyclin repressor-like, C-terminal domain ABC3633 PF00440 Bacterial regulatory proteins, tetR family ABC3640 PF00005 ABC transporter ABC3641 PF00072 Response regulator receiver domain ABC3641 PF00486 Transcriptional regulatory protein, C terminal ABC3642 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABC3642 PF00512 His Kinase A (phospho-acceptor) domain ABC3643 PF00294 pfkB family carbohydrate kinase ABC3644 PF07722 Peptidase C26 ABC3645 PF18801 response regulator aspartate phosphatase H, N terminal ABC3646 PF00072 Response regulator receiver domain ABC3646 PF12833 Helix-turn-helix domain ABC3647 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABC3647 PF06580 Histidine kinase ABC3648 PF00528 Binding-protein-dependent transport system inner membrane component ABC3649 PF00005 ABC transporter ABC3649 PF08402 TOBE domain ABC3653 PF01546 Peptidase family M20/M25/M40 ABC3655 PF00939 Sodium:sulfate symporter transmembrane region ABC3656 PF01546 Peptidase family M20/M25/M40 ABC3656 PF07687 Peptidase dimerisation domain ABC3657 PF00005 ABC transporter ABC3657 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ABC3658 PF00005 ABC transporter ABC3658 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ABC3659 PF00528 Binding-protein-dependent transport system inner membrane component ABC3659 PF12911 N-terminal TM domain of oligopeptide transport permease C ABC3660 PF00528 Binding-protein-dependent transport system inner membrane component ABC3661 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ABC3662 PF03466 LysR substrate binding domain ABC3662 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABC3663 PF01869 BadF/BadG/BcrA/BcrD ATPase family ABC3665 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit ABC3666 PF02378 Phosphotransferase system, EIIC ABC3666 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit ABC3667 PF02378 Phosphotransferase system, EIIC ABC3669 PF02056 Family 4 glycosyl hydrolase ABC3669 PF11975 Family 4 glycosyl hydrolase C-terminal domain ABC3681 PF01638 HxlR-like helix-turn-helix ABC3682 PF02525 Flavodoxin-like fold ABC3683 PF12833 Helix-turn-helix domain ABC3683 PF01965 DJ-1/PfpI family ABC3686 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain ABC3686 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain ABC3686 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain ABC3687 PF01943 Polysaccharide biosynthesis protein ABC3688 PF04321 RmlD substrate binding domain ABC3689 PF16363 GDP-mannose 4,6 dehydratase ABC3690 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase ABC3691 PF00483 Nucleotidyl transferase ABC3692 PF00535 Glycosyl transferase family 2 ABC3694 PF00535 Glycosyl transferase family 2 ABC3697 PF02397 Bacterial sugar transferase ABC3698 PF00483 Nucleotidyl transferase ABC3699 PF00669 Bacterial flagellin N-terminal helical region ABC3699 PF00700 Bacterial flagellin C-terminal helical region ABC3700 PF18801 response regulator aspartate phosphatase H, N terminal ABC3701 PF05504 Spore germination B3/ GerAC like, C-terminal ABC3702 PF03845 Spore germination protein ABC3703 PF03323 Bacillus/Clostridium GerA spore germination protein ABC3704 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABC3704 PF00724 NADH:flavin oxidoreductase / NADH oxidase family ABC3708 PF01235 Sodium:alanine symporter family ABC3709 PF01596 O-methyltransferase ABC3710 PF03466 LysR substrate binding domain ABC3710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABC3711 PF01022 Bacterial regulatory protein, arsR family ABC3712 PF13630 SdpI/YhfL protein family ABC3712 PF07853 Protein of unknown function (DUF1648) ABC3716 PF00528 Binding-protein-dependent transport system inner membrane component ABC3717 PF00005 ABC transporter ABC3719 PF01965 DJ-1/PfpI family ABC3722 PF01048 Phosphorylase superfamily ABC3724 PF12697 Alpha/beta hydrolase family ABC3726 PF03764 Elongation factor G, domain IV ABC3726 PF14492 Elongation Factor G, domain II ABC3726 PF00009 Elongation factor Tu GTP binding domain ABC3726 PF00679 Elongation factor G C-terminus ABC3727 PF10503 Esterase PHB depolymerase ABC3728 PF11553 Protein of unknown function (DUF3231) ABC3729 PF10710 Protein of unknown function (DUF2512) ABC3730 PF09844 Uncharacterized conserved protein (COG2071) ABC3731 PF01425 Amidase ABC3732 PF01979 Amidohydrolase family ABC3733 PF03606 C4-dicarboxylate anaerobic carrier ABC3734 PF00576 HIUase/Transthyretin family ABC3735 PF09349 OHCU decarboxylase ABC3735 PF01014 Uricase ABC3736 PF01014 Uricase ABC3736 PF09349 OHCU decarboxylase ABC3737 PF13556 PucR C-terminal helix-turn-helix domain ABC3737 PF17853 GGDEF-like domain ABC3737 PF07905 Purine catabolism regulatory protein-like family ABC3738 PF01546 Peptidase family M20/M25/M40 ABC3739 PF00266 Aminotransferase class-V ABC3740 PF00111 2Fe-2S iron-sulfur cluster binding domain ABC3740 PF01799 [2Fe-2S] binding domain ABC3741 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain ABC3741 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase ABC3744 PF02625 XdhC and CoxI family ABC3744 PF13478 XdhC Rossmann domain ABC3746 PF00528 Binding-protein-dependent transport system inner membrane component ABC3747 PF00005 ABC transporter ABC3749 PF00528 Binding-protein-dependent transport system inner membrane component ABC3750 PF00005 ABC transporter ABC3751 PF01032 FecCD transport family ABC3752 PF01497 Periplasmic binding protein ABC3753 PF01230 HIT domain ABC3754 PF02082 Transcriptional regulator ABC3759 PF03737 Aldolase/RraA ABC3762 PF00106 short chain dehydrogenase ABC3764 PF00367 phosphotransferase system, EIIB ABC3764 PF02378 Phosphotransferase system, EIIC ABC3765 PF08244 Glycosyl hydrolases family 32 C terminal ABC3765 PF00251 Glycosyl hydrolases family 32 N-terminal domain ABC3766 PF00356 Bacterial regulatory proteins, lacI family ABC3766 PF13407 Periplasmic binding protein domain ABC3767 PF00881 Nitroreductase family ABC3768 PF13411 MerR HTH family regulatory protein ABC3770 PF03746 LamB/YcsF family ABC3771 PF01566 Natural resistance-associated macrophage protein ABC3772 PF02626 Carboxyltransferase domain, subdomain A and B ABC3773 PF02682 Carboxyltransferase domain, subdomain C and D ABC3774 PF01547 Bacterial extracellular solute-binding protein ABC3775 PF00528 Binding-protein-dependent transport system inner membrane component ABC3776 PF00528 Binding-protein-dependent transport system inner membrane component ABC3781 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABC3781 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster ABC3782 PF01180 Dihydroorotate dehydrogenase ABC3783 PF01979 Amidohydrolase family ABC3785 PF07687 Peptidase dimerisation domain ABC3785 PF01546 Peptidase family M20/M25/M40 ABC3786 PF00202 Aminotransferase class-III ABC3788 PF13460 NAD(P)H-binding ABC3789 PF02082 Transcriptional regulator ABC3790 PF02378 Phosphotransferase system, EIIC ABC3790 PF00367 phosphotransferase system, EIIB ABC3790 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 ABC3791 PF03123 CAT RNA binding domain ABC3791 PF00874 PRD domain ABC3792 PF00232 Glycosyl hydrolase family 1 ABC3808 PF18801 response regulator aspartate phosphatase H, N terminal ABC3810 PF00171 Aldehyde dehydrogenase family ABC3811 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase ABC3811 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase ABC3815 PF13614 AAA domain ABC3816 PF13807 G-rich domain on putative tyrosine kinase ABC3816 PF02706 Chain length determinant protein ABC3817 PF03816 Cell envelope-related transcriptional attenuator domain ABC3819 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ABC3820 PF01230 HIT domain ABC3821 PF01098 Cell cycle protein ABC3822 PF16363 GDP-mannose 4,6 dehydratase ABC3823 PF03816 Cell envelope-related transcriptional attenuator domain ABC3824 PF14542 GCN5-related N-acetyl-transferase ABC3826 PF00817 impB/mucB/samB family ABC3826 PF11799 impB/mucB/samB family C-terminal domain ABC3827 PF01476 LysM domain ABC3827 PF00877 NlpC/P60 family ABC3829 PF05163 DinB family ABC3831 PF01061 ABC-2 type transporter ABC3832 PF07977 FabA-like domain ABC3834 PF02525 Flavodoxin-like fold ABC3835 PF05504 Spore germination B3/ GerAC like, C-terminal ABC3836 PF03845 Spore germination protein ABC3837 PF03323 Bacillus/Clostridium GerA spore germination protein ABC3838 PF11772 DNA-directed RNA polymerase subunit beta ABC3839 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ABC3839 PF00460 Flagella basal body rod protein ABC3840 PF00460 Flagella basal body rod protein ABC3840 PF06429 Flagellar basal body rod FlgEFG protein C-terminal ABC3842 PF12116 Stage III sporulation protein D ABC3843 PF00893 Small Multidrug Resistance protein ABC3844 PF00893 Small Multidrug Resistance protein ABC3845 PF01551 Peptidase family M23 ABC3846 PF08486 Stage II sporulation protein ABC3847 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ABC3848 PF08680 TATA-box binding ABC3850 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain ABC3850 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain ABC3851 PF02874 ATP synthase alpha/beta family, beta-barrel domain ABC3851 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ABC3852 PF00231 ATP synthase ABC3853 PF00306 ATP synthase alpha/beta chain, C terminal domain ABC3853 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ABC3853 PF02874 ATP synthase alpha/beta family, beta-barrel domain ABC3854 PF00213 ATP synthase delta (OSCP) subunit ABC3855 PF00430 ATP synthase B/B' CF(0) ABC3856 PF00137 ATP synthase subunit C ABC3857 PF00119 ATP synthase A chain ABC3860 PF05922 Peptidase inhibitor I9 ABC3860 PF00082 Subtilase family ABC3860 PF13860 FlgD Ig-like domain ABC3860 PF02225 PA domain ABC3861 PF00583 Acetyltransferase (GNAT) family ABC3863 PF00464 Serine hydroxymethyltransferase ABC3864 PF04260 Protein of unknown function (DUF436) ABC3865 PF02502 Ribose/Galactose Isomerase ABC3866 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABC3867 PF01451 Low molecular weight phosphotyrosine protein phosphatase ABC3868 PF02659 Putative manganese efflux pump ABC3870 PF03481 Putative GTP-binding controlling metal-binding ABC3870 PF01300 Telomere recombination ABC3872 PF09551 Stage II sporulation protein R (spore_II_R) ABC3873 PF17827 PrmC N-terminal domain ABC3873 PF13847 Methyltransferase domain ABC3874 PF03462 PCRF domain ABC3874 PF00472 RF-1 domain ABC3875 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain ABC3875 PF07992 Pyridine nucleotide-disulphide oxidoreductase ABC3877 PF00265 Thymidine kinase ABC3878 PF01197 Ribosomal protein L31 ABC3879 PF07498 Rho termination factor, N-terminal domain ABC3879 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain ABC3879 PF07497 Rho termination factor, RNA-binding domain ABC3880 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded ABC3881 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) ABC3882 PF00923 Transaldolase/Fructose-6-phosphate aldolase ABC3883 PF01116 Fructose-bisphosphate aldolase class-II ABC3884 PF00072 Response regulator receiver domain ABC3886 PF00117 Glutamine amidotransferase class-I ABC3886 PF06418 CTP synthase N-terminus ABC3887 PF05066 HB1, ASXL, restriction endonuclease HTH domain ABC3889 PF02770 Acyl-CoA dehydrogenase, middle domain ABC3889 PF00441 Acyl-CoA dehydrogenase, C-terminal domain ABC3889 PF02771 Acyl-CoA dehydrogenase, N-terminal domain ABC3890 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain ABC3890 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain ABC3891 PF00108 Thiolase, N-terminal domain ABC3891 PF02803 Thiolase, C-terminal domain ABC3892 PF13183 4Fe-4S dicluster domain ABC3892 PF02754 Cysteine-rich domain ABC3893 PF13091 PLD-like domain ABC3894 PF04306 Protein of unknown function (DUF456) ABC3895 PF03485 Arginyl tRNA synthetase N terminal domain ABC3895 PF00750 tRNA synthetases class I (R) ABC3895 PF05746 DALR anticodon binding domain ABC3897 PF00491 Arginase family ABC3898 PF17284 Spermidine synthase tetramerisation domain ABC3899 PF00905 Penicillin binding protein transpeptidase domain ABC3899 PF00912 Transglycosylase ABC3901 PF08439 Oligopeptidase F ABC3901 PF01432 Peptidase family M3 ABC3902 PF08741 YwhD family ABC3904 PF04203 Sortase domain ABC3905 PF01361 Tautomerase enzyme ABC3907 PF01966 HD domain ABC3908 PF00375 Sodium:dicarboxylate symporter family ABC3909 PF03099 Biotin/lipoate A/B protein ligase family ABC3910 PF01515 Phosphate acetyl/butaryl transferase ABC3911 PF00378 Enoyl-CoA hydratase/isomerase ABC3916 PF00005 ABC transporter ABC3916 PF13732 Domain of unknown function (DUF4162) ABC3917 PF00005 ABC transporter ABC3920 PF07486 Cell Wall Hydrolase ABC3921 PF09671 Spore coat protein (Spore_GerQ) ABC3922 PF04241 Protein of unknown function (DUF423) ABC3923 PF00583 Acetyltransferase (GNAT) family ABC3924 PF00474 Sodium:solute symporter family ABC3928 PF00909 Ammonium Transporter Family ABC3930 PF03167 Uracil DNA glycosylase superfamily ABC3932 PF08543 Phosphomethylpyrimidine kinase ABC3933 PF00221 Aromatic amino acid lyase ABC3936 PF00392 Bacterial regulatory proteins, gntR family ABC3936 PF00155 Aminotransferase class I and II ABC3938 PF01053 Cys/Met metabolism PLP-dependent enzyme ABC3940 PF00120 Glutamine synthetase, catalytic domain ABC3940 PF03951 Glutamine synthetase, beta-Grasp domain ABC3943 PF00270 DEAD/DEAH box helicase ABC3943 PF00271 Helicase conserved C-terminal domain ABC3944 PF00085 Thioredoxin ABC3945 PF02600 Disulfide bond formation protein DsbB ABC3946 PF01266 FAD dependent oxidoreductase ABC3946 PF00355 Rieske [2Fe-2S] domain ABC3949 PF01145 SPFH domain / Band 7 family ABC3949 PF15975 Flotillin ABC3950 PF00557 Metallopeptidase family M24 ABC3952 PF00245 Alkaline phosphatase ABC3953 PF01131 DNA topoisomerase ABC3953 PF01751 Toprim domain ABC3954 PF10672 S-adenosylmethionine-dependent methyltransferase ABC3954 PF17785 PUA-like domain ABC3955 PF12823 Domain of unknown function (DUF3817) ABC3956 PF11181 Heat induced stress protein YflT ABC3958 PF00950 ABC 3 transport family ABC3959 PF00950 ABC 3 transport family ABC3960 PF00005 ABC transporter ABC3961 PF01297 Zinc-uptake complex component A periplasmic ABC3963 PF07687 Peptidase dimerisation domain ABC3963 PF01546 Peptidase family M20/M25/M40 ABC3965 PF00672 HAMP domain ABC3965 PF02743 Cache domain ABC3965 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABC3966 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family ABC3966 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain ABC3966 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain ABC3967 PF07690 Major Facilitator Superfamily ABC3969 PF00199 Catalase ABC3969 PF06628 Catalase-related immune-responsive ABC3970 PF00005 ABC transporter ABC3970 PF00664 ABC transporter transmembrane region ABC3971 PF01565 FAD binding domain ABC3971 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain ABC3972 PF01613 Flavin reductase like domain ABC3973 PF04239 Protein of unknown function (DUF421) ABC3974 PF00781 Diacylglycerol kinase catalytic domain ABC3975 PF07739 TipAS antibiotic-recognition domain ABC3975 PF13411 MerR HTH family regulatory protein ABC3976 PF10026 Predicted Zn-dependent protease (DUF2268) ABC3977 PF04229 GrpB protein ABC3978 PF02824 TGS domain ABC3978 PF03129 Anticodon binding domain ABC3978 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain ABC3978 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) ABC3979 PF06445 GyrI-like small molecule binding domain ABC3987 PF01872 RibD C-terminal domain ABC3987 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region ABC3990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABC3990 PF06580 Histidine kinase ABC3993 PF00005 ABC transporter ABC3993 PF12857 TOBE-like domain ABC3993 PF17850 CysA C-terminal regulatory domain ABC3994 PF00939 Sodium:sulfate symporter transmembrane region ABC3995 PF00072 Response regulator receiver domain ABC3996 PF17203 Single cache domain 3 ABC3996 PF00989 PAS fold ABC3996 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABC3996 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain ABC3997 PF00293 NUDIX domain ABC3998 PF01156 Inosine-uridine preferring nucleoside hydrolase ABC4000 PF05525 Branched-chain amino acid transport protein ABC4004 PF13847 Methyltransferase domain ABC4004 PF03551 Transcriptional regulator PadR-like family ABC4005 PF00209 Sodium:neurotransmitter symporter family ABC4006 PF01329 Pterin 4 alpha carbinolamine dehydratase ABC4009 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABC4009 PF00512 His Kinase A (phospho-acceptor) domain ABC4009 PF00672 HAMP domain ABC4009 PF18698 Histidine kinase sensor domain ABC4010 PF00486 Transcriptional regulatory protein, C terminal ABC4010 PF00072 Response regulator receiver domain ABC4012 PF07690 Major Facilitator Superfamily ABC4017 PF02645 Uncharacterised protein, DegV family COG1307 ABC4018 PF01713 Smr domain ABC4018 PF00488 MutS domain V ABC4019 PF00253 Ribosomal protein S14p/S29e ABC4020 PF02492 CobW/HypB/UreG, nucleotide-binding domain ABC4020 PF07683 Cobalamin synthesis protein cobW C-terminal domain ABC4021 PF01048 Phosphorylase superfamily ABC4022 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily ABC4023 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase ABC4024 PF01144 Coenzyme A transferase ABC4025 PF01144 Coenzyme A transferase ABC4026 PF02667 Short chain fatty acid transporter ABC4027 PF00356 Bacterial regulatory proteins, lacI family ABC4028 PF00528 Binding-protein-dependent transport system inner membrane component ABC4029 PF00528 Binding-protein-dependent transport system inner membrane component ABC4030 PF13416 Bacterial extracellular solute-binding protein ABC4031 PF16657 Maltogenic Amylase, C-terminal domain ABC4031 PF02903 Alpha amylase, N-terminal ig-like domain ABC4031 PF00128 Alpha amylase, catalytic domain ABC4032 PF07969 Amidohydrolase family ABC4033 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin ABC4034 PF07905 Purine catabolism regulatory protein-like family ABC4034 PF13556 PucR C-terminal helix-turn-helix domain ABC4034 PF17853 GGDEF-like domain ABC4035 PF01266 FAD dependent oxidoreductase ABC4036 PF02754 Cysteine-rich domain ABC4036 PF13183 4Fe-4S dicluster domain ABC4037 PF02913 FAD linked oxidases, C-terminal domain ABC4037 PF01565 FAD binding domain ABC4038 PF07729 FCD domain ABC4038 PF00392 Bacterial regulatory proteins, gntR family ABC4039 PF07729 FCD domain ABC4039 PF00392 Bacterial regulatory proteins, gntR family ABC4042 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family ABC4042 PF03466 LysR substrate binding domain ABC4043 PF00285 Citrate synthase, C-terminal domain ABC4044 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component ABC4046 PF03480 Bacterial extracellular solute-binding protein, family 7 ABC4047 PF00392 Bacterial regulatory proteins, gntR family ABC4047 PF07729 FCD domain ABC4048 PF02615 Malate/L-lactate dehydrogenase ABC4049 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain ABC4049 PF00672 HAMP domain ABC4049 PF02743 Cache domain ABC4051 PF08281 Sigma-70, region 4 ABC4051 PF04542 Sigma-70 region 2 ABC4056 PF02554 Carbon starvation protein CstA ABC4057 PF00072 Response regulator receiver domain ABC4057 PF04397 LytTr DNA-binding domain ABC4058 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABC4058 PF06580 Histidine kinase ABC4058 PF07694 5TMR of 5TMR-LYT ABC4062 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ABC4062 PF00005 ABC transporter ABC4063 PF00005 ABC transporter ABC4063 PF08352 Oligopeptide/dipeptide transporter, C-terminal region ABC4064 PF00528 Binding-protein-dependent transport system inner membrane component ABC4065 PF00528 Binding-protein-dependent transport system inner membrane component ABC4066 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle ABC4069 PF00005 ABC transporter ABC4071 PF03830 PTS system sorbose subfamily IIB component ABC4072 PF03609 PTS system sorbose-specific iic component ABC4073 PF03613 PTS system mannose/fructose/sorbose family IID component ABC4074 PF01380 SIS domain ABC4075 PF00874 PRD domain ABC4075 PF03610 PTS system fructose IIA component ABC4075 PF00158 Sigma-54 interaction domain ABC4076 PF00596 Class II Aldolase and Adducin N-terminal domain ABC4077 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component ABC4078 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component ABC4079 PF03480 Bacterial extracellular solute-binding protein, family 7 ABC4080 PF00107 Zinc-binding dehydrogenase ABC4080 PF08240 Alcohol dehydrogenase GroES-like domain ABC4081 PF07729 FCD domain ABC4081 PF00392 Bacterial regulatory proteins, gntR family ABC4082 PF07005 Sugar-binding N-terminal domain ABC4082 PF17042 Nucleotide-binding C-terminal domain ABC4085 PF08241 Methyltransferase domain ABC4086 PF01026 TatD related DNase ABC4093 PF02590 Predicted SPOUT methyltransferase ABC4094 PF13180 PDZ domain ABC4095 PF00753 Metallo-beta-lactamase superfamily ABC4096 PF09648 YycH protein ABC4098 PF00672 HAMP domain ABC4098 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase ABC4098 PF00512 His Kinase A (phospho-acceptor) domain ABC4098 PF13426 PAS domain ABC4099 PF00486 Transcriptional regulatory protein, C terminal ABC4099 PF00072 Response regulator receiver domain ABC4100 PF00709 Adenylosuccinate synthetase ABC4101 PF00772 DnaB-like helicase N terminal domain ABC4101 PF03796 DnaB-like helicase C terminal domain ABC4102 PF01281 Ribosomal protein L9, N-terminal domain ABC4102 PF03948 Ribosomal protein L9, C-terminal domain ABC4103 PF01368 DHH family ABC4103 PF02272 DHHA1 domain ABC4105 PF01084 Ribosomal protein S18 ABC4106 PF00436 Single-strand binding protein family ABC4107 PF01250 Ribosomal protein S6 ABC4108 PF01926 50S ribosome-binding GTPase ABC4108 PF06071 Protein of unknown function (DUF933) ABC4110 PF06866 Protein of unknown function (DUF1256) ABC4111 PF00266 Aminotransferase class-V ABC4112 PF02195 ParB-like nuclease domain ABC4112 PF17762 HTH domain found in ParB protein ABC4113 PF13614 AAA domain ABC4114 PF02195 ParB-like nuclease domain ABC4114 PF17762 HTH domain found in ParB protein ABC4115 PF02527 rRNA small subunit methyltransferase G ABC4116 PF13932 GidA associated domain ABC4116 PF01134 Glucose inhibited division protein A ABC4117 PF10396 GTP-binding protein TrmE N-terminus ABC4117 PF12631 MnmE helical domain ABC4117 PF01926 50S ribosome-binding GTPase ABC4118 PF14804 Jag N-terminus ABC4118 PF01424 R3H domain ABC4119 PF02096 60Kd inner membrane protein ABC4120 PF00825 Ribonuclease P ABC4121 PF00468 Ribosomal protein L34