SB48_HM08orf00002 SM00382 ATPases associated with a variety of cellular activities SB48_HM08orf00002 SM00760 Bacterial dnaA protein helix-turn-helix domain SB48_HM08orf00007 SM00393 Putative single-stranded nucleic acids-binding domain SB48_HM08orf00007 SM01245 SB48_HM08orf00007 SB48_HM08orf00012 SM01228 SB48_HM08orf00012 SB48_HM08orf00016 SM00470 ParB-like nuclease domain SB48_HM08orf00020 SM00470 ParB-like nuclease domain SB48_HM08orf00042 SM00267 diguanylate cyclase SB48_HM08orf00050 SM00788 Adenylosuccinate synthetase SB48_HM08orf00053 SM00448 cheY-homologous receiver domain SB48_HM08orf00053 SM00862 Transcriptional regulatory protein, C terminal SB48_HM08orf00054 SM00091 PAS domain SB48_HM08orf00054 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain SB48_HM08orf00054 SM00387 Histidine kinase-like ATPases SB48_HM08orf00054 SM00388 His Kinase A (phosphoacceptor) domain SB48_HM08orf00057 SM00849 Metallo-beta-lactamase superfamily SB48_HM08orf00059 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. SB48_HM08orf00068 SM00345 helix_turn_helix gluconate operon transcriptional repressor SB48_HM08orf00074 SM00873 B3/4 domain SB48_HM08orf00082 SM00382 ATPases associated with a variety of cellular activities SB48_HM08orf00097 SM00487 DEAD-like helicases superfamily SB48_HM08orf00104 SM00382 ATPases associated with a variety of cellular activities SB48_HM08orf00106 SM00062 Bacterial periplasmic substrate-binding proteins SB48_HM08orf00106 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. SB48_HM08orf00118 SM00382 ATPases associated with a variety of cellular activities SB48_HM08orf00122 SM00062 Bacterial periplasmic substrate-binding proteins SB48_HM08orf00122 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. SB48_HM08orf00125 SM00345 helix_turn_helix gluconate operon transcriptional repressor SB48_HM08orf00125 SM00866 SB48_HM08orf00125 SB48_HM08orf00129 SM00642 Alpha-amylase domain SB48_HM08orf00140 SM00382 ATPases associated with a variety of cellular activities SB48_HM08orf00142 SM01133 SB48_HM08orf00142 SB48_HM08orf00165 SM00382 ATPases associated with a variety of cellular activities SB48_HM08orf00168 SM00382 ATPases associated with a variety of cellular activities SB48_HM08orf00168 SM00930 SB48_HM08orf00168 SB48_HM08orf00172 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. SB48_HM08orf00173 SM00448 cheY-homologous receiver domain SB48_HM08orf00173 SM00850 LytTr DNA-binding domain SB48_HM08orf00205 SM00098 Alkaline phosphatase homologues SB48_HM08orf00207 SM00341 Helicase and RNase D C-terminal SB48_HM08orf00207 SM00487 DEAD-like helicases superfamily SB48_HM08orf00207 SM00490 helicase superfamily c-terminal domain SB48_HM08orf00207 SM00956 SB48_HM08orf00207 SB48_HM08orf00216 SM00382 ATPases associated with a variety of cellular activities SB48_HM08orf00222 SM00382 ATPases associated with a variety of cellular activities SB48_HM08orf00224 SM00530 Helix-turn-helix XRE-family like proteins SB48_HM08orf00226 SM00986 Uracil DNA glycosylase superfamily SB48_HM08orf00226 SM00987 UreE urease accessory protein, C-terminal domain SB48_HM08orf00247 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. SB48_HM08orf00261 SM00836 DALR anticodon binding domain SB48_HM08orf00261 SM01016 Arginyl tRNA synthetase N terminal dom SB48_HM08orf00262 SM00155 Phospholipase D. Active site motifs. SB48_HM08orf00283 SM00382 ATPases associated with a variety of cellular activities SB48_HM08orf00291 SM00345 helix_turn_helix gluconate operon transcriptional repressor SB48_HM08orf00293 SM00382 ATPases associated with a variety of cellular activities SB48_HM08orf00296 SM00448 cheY-homologous receiver domain SB48_HM08orf00310 SM00357 Cold shock protein domain SB48_HM08orf00310 SM00382 ATPases associated with a variety of cellular activities SB48_HM08orf00310 SM00959 Rho termination factor, N-terminal domain SB48_HM08orf00315 SM00937 SB48_HM08orf00315 SB48_HM08orf00328 SM00226 Low molecular weight phosphatase family SB48_HM08orf00329 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). SB48_HM08orf00329 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain SB48_HM08orf00350 SM00382 ATPases associated with a variety of cellular activities SB48_HM08orf00381 SM00487 DEAD-like helicases superfamily SB48_HM08orf00381 SM00490 helicase superfamily c-terminal domain SB48_HM08orf00390 SM00116 Domain in cystathionine beta-synthase and other proteins. SB48_HM08orf00390 SM01091 Transporter associated domain SB48_HM08orf00391 SM00422 helix_turn_helix, mercury resistance SB48_HM08orf00393 SM01091 Transporter associated domain SB48_HM08orf00403 SM00642 Alpha-amylase domain SB48_HM08orf00413 SM00642 Alpha-amylase domain SB48_HM08orf00414 SM00642 Alpha-amylase domain SB48_HM08orf00417 SM00354 helix_turn _helix lactose operon repressor SB48_HM08orf00426 SM00487 DEAD-like helicases superfamily SB48_HM08orf00426 SM00490 helicase superfamily c-terminal domain SB48_HM08orf00434 SM01005 Alanine racemase, C-terminal domain SB48_HM08orf00445 SM00387 Histidine kinase-like ATPases SB48_HM08orf00448 SM00331 Sigma factor PP2C-like phosphatases SB48_HM08orf00453 SM00331 Sigma factor PP2C-like phosphatases SB48_HM08orf00457 SM00316 Ribosomal protein S1-like RNA-binding domain SB48_HM08orf00457 SM00732 Likely ribonuclease with RNase H fold. SB48_HM08orf00460 SM00731 SprT homologues. SB48_HM08orf00474 SM00382 ATPases associated with a variety of cellular activities SB48_HM08orf00476 SM00881 CoA binding domain SB48_HM08orf00488 SM00883 Chaperonin 10 Kd subunit SB48_HM08orf00498 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain SB48_HM08orf00509 SM00530 Helix-turn-helix XRE-family like proteins SB48_HM08orf00513 SM00382 ATPases associated with a variety of cellular activities SB48_HM08orf00529 SM00382 ATPases associated with a variety of cellular activities SB48_HM08orf00539 SM00345 helix_turn_helix gluconate operon transcriptional repressor SB48_HM08orf00540 SM00382 ATPases associated with a variety of cellular activities SB48_HM08orf00553 SM00346 helix_turn_helix isocitrate lyase regulation SB48_HM08orf00575 SM00346 helix_turn_helix isocitrate lyase regulation SB48_HM08orf00583 SM00382 ATPases associated with a variety of cellular activities SB48_HM08orf00586 SM00421 helix_turn_helix, Lux Regulon SB48_HM08orf00586 SM00448 cheY-homologous receiver domain SB48_HM08orf00591 SM00382 ATPases associated with a variety of cellular activities SB48_HM08orf00598 SM01061 CAT RNA binding domain SB48_HM08orf00630 SM01001 AIR carboxylase SB48_HM08orf00634 SM00998 Adenylosuccinate lyase C-terminus SB48_HM08orf00637 SM01211 SB48_HM08orf00637 SB48_HM08orf00645 SM00798 AICARFT/IMPCHase bienzyme SB48_HM08orf00645 SM00851 MGS-like domain SB48_HM08orf00647 SM01209 SB48_HM08orf00647 SB48_HM08orf00647 SM01210 SB48_HM08orf00647 SB48_HM08orf00662 SM00278 Helix-hairpin-helix DNA-binding motif class 1 SB48_HM08orf00662 SM00292 breast cancer carboxy-terminal domain SB48_HM08orf00662 SM00532 Ligase N family SB48_HM08orf00673 SM00845 GatB domain SB48_HM08orf00684 SM00046 Diacylglycerol kinase catalytic domain (presumed) SB48_HM08orf00726 SM00530 Helix-turn-helix XRE-family like proteins SB48_HM08orf00730 SM00822 SB48_HM08orf00730 SB48_HM08orf00735 SM00829 Enoylreductase SB48_HM08orf00747 SM00530 Helix-turn-helix XRE-family like proteins SB48_HM08orf00768 SM00062 Bacterial periplasmic substrate-binding proteins SB48_HM08orf00768 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. SB48_HM08orf00770 SM00382 ATPases associated with a variety of cellular activities SB48_HM08orf00779 SM00796 Allophanate hydrolase subunit 1 SB48_HM08orf00782 SM00797 Allophanate hydrolase subunit 2 SB48_HM08orf00805 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain SB48_HM08orf00806 SM01133 SB48_HM08orf00806 SB48_HM08orf00819 SM01240 SB48_HM08orf00819 SB48_HM08orf00822 SM00062 Bacterial periplasmic substrate-binding proteins SB48_HM08orf00825 SM00382 ATPases associated with a variety of cellular activities SB48_HM08orf00859 SM00257 Lysin motif SB48_HM08orf00862 SM00347 helix_turn_helix multiple antibiotic resistance protein SB48_HM08orf00863 SM00382 ATPases associated with a variety of cellular activities SB48_HM08orf00866 SM00382 ATPases associated with a variety of cellular activities SB48_HM08orf00891 SM00357 Cold shock protein domain SB48_HM08orf00893 SM00825 Beta-ketoacyl synthase SB48_HM08orf00894 SM00387 Histidine kinase-like ATPases SB48_HM08orf00907 SM00354 helix_turn _helix lactose operon repressor SB48_HM08orf00927 SM00354 helix_turn _helix lactose operon repressor SB48_HM08orf00931 SM00382 ATPases associated with a variety of cellular activities SB48_HM08orf00943 SM00829 Enoylreductase SB48_HM08orf00961 SM00919 Malic enzyme, NAD binding domain SB48_HM08orf00961 SM01274 SB48_HM08orf00961 SB48_HM08orf00988 SM00382 ATPases associated with a variety of cellular activities SB48_HM08orf00992 SM00062 Bacterial periplasmic substrate-binding proteins SB48_HM08orf00995 SM00062 Bacterial periplasmic substrate-binding proteins SB48_HM08orf01021 SM00487 DEAD-like helicases superfamily SB48_HM08orf01024 SM00382 ATPases associated with a variety of cellular activities SB48_HM08orf01040 SM00926 Molybdopterin oxidoreductase Fe4S4 domain SB48_HM08orf01046 SM00382 ATPases associated with a variety of cellular activities SB48_HM08orf01057 SM00382 ATPases associated with a variety of cellular activities SB48_HM08orf01072 SM01120 SB48_HM08orf01072 SB48_HM08orf01074 SM01130 SB48_HM08orf01074 SB48_HM08orf01078 SM01134 SB48_HM08orf01078 SB48_HM08orf01079 SM00382 ATPases associated with a variety of cellular activities SB48_HM08orf01097 SM00878 Biotin carboxylase C-terminal domain SB48_HM08orf01139 SM01120 SB48_HM08orf01139 SB48_HM08orf01152 SM00954 Region found in RelA / SpoT proteins SB48_HM08orf01176 SM00420 helix_turn_helix, Deoxyribose operon repressor SB48_HM08orf01176 SM01134 SB48_HM08orf01176 SB48_HM08orf01197 SM00487 DEAD-like helicases superfamily SB48_HM08orf01197 SM00490 helicase superfamily c-terminal domain SB48_HM08orf01200 SM00487 DEAD-like helicases superfamily SB48_HM08orf01200 SM00490 helicase superfamily c-terminal domain SB48_HM08orf01209 SM00530 Helix-turn-helix XRE-family like proteins SB48_HM08orf01211 SM00855 Phosphoglycerate mutase family SB48_HM08orf01225 SM00421 helix_turn_helix, Lux Regulon SB48_HM08orf01231 SM00257 Lysin motif SB48_HM08orf01231 SM00646 SB48_HM08orf01231 SB48_HM08orf01233 SM00947 Carbonic anhydrase SB48_HM08orf01246 SM00244 prohibitin homologues SB48_HM08orf01282 SM00478 endonuclease III SB48_HM08orf01286 SM00347 helix_turn_helix multiple antibiotic resistance protein SB48_HM08orf01288 SM00382 ATPases associated with a variety of cellular activities SB48_HM08orf01290 SM00382 ATPases associated with a variety of cellular activities SB48_HM08orf01298 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). SB48_HM08orf01301 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain SB48_HM08orf01301 SM01232 SB48_HM08orf01301 SB48_HM08orf01303 SM00363 S4 RNA-binding domain SB48_HM08orf01326 SM00530 Helix-turn-helix XRE-family like proteins SB48_HM08orf01330 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). SB48_HM08orf01330 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain SB48_HM08orf01354 SM00870 SB48_HM08orf01354 SB48_HM08orf01358 SM00387 Histidine kinase-like ATPases SB48_HM08orf01359 SM00448 cheY-homologous receiver domain SB48_HM08orf01359 SM00850 LytTr DNA-binding domain SB48_HM08orf01388 SM00917 LeuA allosteric (dimerisation) domain SB48_HM08orf01389 SM01329 SB48_HM08orf01389 SB48_HM08orf01406 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). SB48_HM08orf01406 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain SB48_HM08orf01421 SM00387 Histidine kinase-like ATPases SB48_HM08orf01422 SM00421 helix_turn_helix, Lux Regulon SB48_HM08orf01422 SM00448 cheY-homologous receiver domain SB48_HM08orf01425 SM00382 ATPases associated with a variety of cellular activities SB48_HM08orf01431 SM00382 ATPases associated with a variety of cellular activities SB48_HM08orf01436 SM00382 ATPases associated with a variety of cellular activities SB48_HM08orf01466 SM00478 endonuclease III SB48_HM08orf01466 SM00525 SB48_HM08orf01466 SB48_HM08orf01471 SM00382 ATPases associated with a variety of cellular activities SB48_HM08orf01489 SM00382 ATPases associated with a variety of cellular activities SB48_HM08orf01505 SM00382 ATPases associated with a variety of cellular activities SB48_HM08orf01507 SM00062 Bacterial periplasmic substrate-binding proteins SB48_HM08orf01539 SM00829 Enoylreductase SB48_HM08orf01562 SM00347 helix_turn_helix multiple antibiotic resistance protein SB48_HM08orf01570 SM00345 helix_turn_helix gluconate operon transcriptional repressor SB48_HM08orf01570 SM00866 SB48_HM08orf01570 SB48_HM08orf01579 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain SB48_HM08orf01579 SM00387 Histidine kinase-like ATPases SB48_HM08orf01579 SM00388 His Kinase A (phosphoacceptor) domain SB48_HM08orf01580 SM00448 cheY-homologous receiver domain SB48_HM08orf01580 SM00862 Transcriptional regulatory protein, C terminal SB48_HM08orf01590 SM00382 ATPases associated with a variety of cellular activities SB48_HM08orf01614 SM00382 ATPases associated with a variety of cellular activities SB48_HM08orf01617 SM00062 Bacterial periplasmic substrate-binding proteins SB48_HM08orf01617 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. SB48_HM08orf01621 SM01131 SB48_HM08orf01621 SB48_HM08orf01629 SM00567 E-Z type HEAT repeats SB48_HM08orf01638 SM00763 PrkA AAA domain SB48_HM08orf01673 SM00382 ATPases associated with a variety of cellular activities SB48_HM08orf01681 SM00382 ATPases associated with a variety of cellular activities SB48_HM08orf01692 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). SB48_HM08orf01698 SM00926 Molybdopterin oxidoreductase Fe4S4 domain SB48_HM08orf01698 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region SB48_HM08orf01711 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain SB48_HM08orf01719 SM01192 SB48_HM08orf01719 SB48_HM08orf01719 SM01193 SB48_HM08orf01719 SB48_HM08orf01728 SM00316 Ribosomal protein S1-like RNA-binding domain SB48_HM08orf01728 SM00357 Cold shock protein domain SB48_HM08orf01728 SM00955 SB48_HM08orf01728 SB48_HM08orf01751 SM00346 helix_turn_helix isocitrate lyase regulation SB48_HM08orf01758 SM00858 SB48_HM08orf01758 SB48_HM08orf01763 SM00822 SB48_HM08orf01763 SB48_HM08orf01766 SM00729 Elongator protein 3, MiaB family, Radical SAM SB48_HM08orf01766 SM00876 Biotin and Thiamin Synthesis associated domain SB48_HM08orf01796 SM00014 Acid phosphatase homologues SB48_HM08orf01798 SM01060 SB48_HM08orf01798 SB48_HM08orf01800 SM00052 Putative diguanylate phosphodiesterase SB48_HM08orf01838 SM00382 ATPases associated with a variety of cellular activities SB48_HM08orf01855 SM00729 Elongator protein 3, MiaB family, Radical SAM SB48_HM08orf01923 SM01298 SB48_HM08orf01923 SB48_HM08orf01942 SM00530 Helix-turn-helix XRE-family like proteins SB48_HM08orf01943 SM00316 Ribosomal protein S1-like RNA-binding domain SB48_HM08orf01948 SM00871 Bacterial transcription activator, effector binding domain SB48_HM08orf01985 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). SB48_HM08orf01985 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain SB48_HM08orf01986 SM00345 helix_turn_helix gluconate operon transcriptional repressor SB48_HM08orf01993 SM00382 ATPases associated with a variety of cellular activities SB48_HM08orf01995 SM00345 helix_turn_helix gluconate operon transcriptional repressor SB48_HM08orf01998 SM01007 Class II Aldolase and Adducin N-terminal domain SB48_HM08orf02011 SM00318 Staphylococcal nuclease homologues SB48_HM08orf02011 SM00894 Excalibur calcium-binding domain SB48_HM08orf02014 SM00450 Rhodanese Homology Domain SB48_HM08orf02048 SM00344 helix_turn_helix ASNC type SB48_HM08orf02084 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain SB48_HM08orf02093 SM01234 SB48_HM08orf02093 SB48_HM08orf02102 SM00382 ATPases associated with a variety of cellular activities SB48_HM08orf02176 SM00849 Metallo-beta-lactamase superfamily SB48_HM08orf02187 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. SB48_HM08orf02187 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain SB48_HM08orf02187 SM00387 Histidine kinase-like ATPases SB48_HM08orf02187 SM00388 His Kinase A (phosphoacceptor) domain SB48_HM08orf02187 SM00448 cheY-homologous receiver domain SB48_HM08orf02189 SM00138 Methyltransferase, chemotaxis proteins SB48_HM08orf02190 SM00331 Sigma factor PP2C-like phosphatases SB48_HM08orf02190 SM00448 cheY-homologous receiver domain SB48_HM08orf02206 SM00382 ATPases associated with a variety of cellular activities SB48_HM08orf02206 SM00843 SB48_HM08orf02206 SB48_HM08orf02222 SM00830 Chorismate mutase type II SB48_HM08orf02225 SM00354 helix_turn _helix lactose operon repressor SB48_HM08orf02230 SM00116 Domain in cystathionine beta-synthase and other proteins. SB48_HM08orf02237 SM00382 ATPases associated with a variety of cellular activities SB48_HM08orf02239 SM00729 Elongator protein 3, MiaB family, Radical SAM SB48_HM08orf02240 SM00852 Probable molybdopterin binding domain SB48_HM08orf02244 SM00852 Probable molybdopterin binding domain SB48_HM08orf02257 SM00926 Molybdopterin oxidoreductase Fe4S4 domain SB48_HM08orf02257 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region SB48_HM08orf02264 SM00363 S4 RNA-binding domain SB48_HM08orf02266 SM00091 PAS domain SB48_HM08orf02266 SM00382 ATPases associated with a variety of cellular activities SB48_HM08orf02272 SM00363 S4 RNA-binding domain SB48_HM08orf02272 SM01390 SB48_HM08orf02272 SB48_HM08orf02276 SM00267 diguanylate cyclase SB48_HM08orf02278 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. SB48_HM08orf02284 SM00981 SB48_HM08orf02284 SB48_HM08orf02311 SM01002 Alanine dehydrogenase/PNT, C-terminal domain SB48_HM08orf02311 SM01003 Alanine dehydrogenase/PNT, N-terminal domain SB48_HM08orf02314 SM00849 Metallo-beta-lactamase superfamily SB48_HM08orf02318 SM00116 Domain in cystathionine beta-synthase and other proteins. SB48_HM08orf02325 SM00481 DNA polymerase alpha chain like domain SB48_HM08orf02326 SM00919 Malic enzyme, NAD binding domain SB48_HM08orf02326 SM01274 SB48_HM08orf02326 SB48_HM08orf02338 SM01329 SB48_HM08orf02338 SB48_HM08orf02343 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs SB48_HM08orf02343 SM00474 3'-5' exonuclease SB48_HM08orf02343 SM00475 5'-3' exonuclease SB48_HM08orf02343 SM00482 DNA polymerase A domain SB48_HM08orf02344 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain SB48_HM08orf02344 SM01232 SB48_HM08orf02344 SB48_HM08orf02350 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain SB48_HM08orf02360 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain SB48_HM08orf02378 SM00829 Enoylreductase SB48_HM08orf02381 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). SB48_HM08orf02403 SM00967 RNA 2'-O ribose methyltransferase substrate binding SB48_HM08orf02409 SM00873 B3/4 domain SB48_HM08orf02409 SM00874 tRNA synthetase B5 domain SB48_HM08orf02409 SM00896 Ferredoxin-fold anticodon binding domain SB48_HM08orf02419 SM00481 DNA polymerase alpha chain like domain SB48_HM08orf02419 SM00483 DNA polymerase X family SB48_HM08orf02421 SM00463 Small MutS-related domain SB48_HM08orf02421 SM00533 DNA-binding domain of DNA mismatch repair MUTS family SB48_HM08orf02421 SM00534 ATPase domain of DNA mismatch repair MUTS family SB48_HM08orf02430 SM00893 Electron transfer flavoprotein domain SB48_HM08orf02431 SM00893 Electron transfer flavoprotein domain SB48_HM08orf02435 SM00465 GIY-YIG type nucleases (URI domain) SB48_HM08orf02450 SM00421 helix_turn_helix, Lux Regulon SB48_HM08orf02463 SM00347 helix_turn_helix multiple antibiotic resistance protein SB48_HM08orf02472 SM00909 Sporulation and spore germination SB48_HM08orf02494 SM00382 ATPases associated with a variety of cellular activities SB48_HM08orf02494 SM00994 ClpX C4-type zinc finger SB48_HM08orf02494 SM01086 C-terminal, D2-small domain, of ClpB protein SB48_HM08orf02497 SM00382 ATPases associated with a variety of cellular activities SB48_HM08orf02498 SM00382 ATPases associated with a variety of cellular activities SB48_HM08orf02498 SM00464 Found in ATP-dependent protease La (LON) SB48_HM08orf02512 SM01004 Delta-aminolevulinic acid dehydratase SB48_HM08orf02518 SM00257 Lysin motif SB48_HM08orf02539 SM01208 SB48_HM08orf02539 SB48_HM08orf02542 SM00382 ATPases associated with a variety of cellular activities SB48_HM08orf02544 SM00382 ATPases associated with a variety of cellular activities SB48_HM08orf02575 SM00316 Ribosomal protein S1-like RNA-binding domain SB48_HM08orf02582 SM01317 SB48_HM08orf02582 SB48_HM08orf02589 SM00257 Lysin motif SB48_HM08orf02601 SM00278 Helix-hairpin-helix DNA-binding motif class 1 SB48_HM08orf02602 SM00382 ATPases associated with a variety of cellular activities SB48_HM08orf02608 SM01323 SB48_HM08orf02608 SB48_HM08orf02627 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. SB48_HM08orf02627 SM00954 Region found in RelA / SpoT proteins SB48_HM08orf02629 SM00347 helix_turn_helix multiple antibiotic resistance protein SB48_HM08orf02633 SM00287 Bacterial SH3 domain homologues SB48_HM08orf02633 SM00646 SB48_HM08orf02633 SB48_HM08orf02651 SM00382 ATPases associated with a variety of cellular activities SB48_HM08orf02664 SM00028 Tetratricopeptide repeats SB48_HM08orf02666 SM00382 ATPases associated with a variety of cellular activities SB48_HM08orf02673 SM00344 helix_turn_helix ASNC type SB48_HM08orf02684 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain SB48_HM08orf02686 SM00732 Likely ribonuclease with RNase H fold. SB48_HM08orf02745 SM01103 SB48_HM08orf02745 SB48_HM08orf02748 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. SB48_HM08orf02755 SM00278 Helix-hairpin-helix DNA-binding motif class 1 SB48_HM08orf02758 SM00849 Metallo-beta-lactamase superfamily SB48_HM08orf02770 SM00838 Elongation factor G C-terminus SB48_HM08orf02772 SM00729 Elongator protein 3, MiaB family, Radical SAM SB48_HM08orf02777 SM00271 DnaJ molecular chaperone homology domain SB48_HM08orf02781 SM00729 Elongator protein 3, MiaB family, Radical SAM SB48_HM08orf02797 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. SB48_HM08orf02807 SM00116 Domain in cystathionine beta-synthase and other proteins. SB48_HM08orf02813 SM00400 zinc finger SB48_HM08orf02813 SM00493 SB48_HM08orf02813 SB48_HM08orf02831 SM00487 DEAD-like helicases superfamily SB48_HM08orf02831 SM00490 helicase superfamily c-terminal domain SB48_HM08orf02834 SM00518 AP endonuclease family 2 SB48_HM08orf02841 SM00382 ATPases associated with a variety of cellular activities SB48_HM08orf02868 SM00849 Metallo-beta-lactamase superfamily SB48_HM08orf02872 SM00382 ATPases associated with a variety of cellular activities SB48_HM08orf02887 SM00487 DEAD-like helicases superfamily SB48_HM08orf02887 SM00490 helicase superfamily c-terminal domain SB48_HM08orf02894 SM00450 Rhodanese Homology Domain SB48_HM08orf02925 SM00841 Elongation factor P, C-terminal SB48_HM08orf02925 SM01185 SB48_HM08orf02925 SB48_HM08orf02927 SM00382 ATPases associated with a variety of cellular activities SB48_HM08orf02942 SM00878 Biotin carboxylase C-terminal domain SB48_HM08orf02952 SM00861 Transketolase, pyrimidine binding domain SB48_HM08orf02954 SM00363 S4 RNA-binding domain SB48_HM08orf02958 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. SB48_HM08orf02960 SM00448 cheY-homologous receiver domain SB48_HM08orf02969 SM00091 PAS domain SB48_HM08orf02969 SM00382 ATPases associated with a variety of cellular activities SB48_HM08orf02973 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase SB48_HM08orf02977 SM00861 Transketolase, pyrimidine binding domain SB48_HM08orf02994 SM00260 Two component signalling adaptor domain SB48_HM08orf03002 SM00849 Metallo-beta-lactamase superfamily SB48_HM08orf03017 SM00257 Lysin motif SB48_HM08orf03017 SM00636 SB48_HM08orf03017 SB48_HM08orf03045 SM00936 Penicillin-binding protein 5, C-terminal domain SB48_HM08orf03049 SM00387 Histidine kinase-like ATPases SB48_HM08orf03075 SM00363 S4 RNA-binding domain SB48_HM08orf03084 SM00448 cheY-homologous receiver domain SB48_HM08orf03084 SM00862 Transcriptional regulatory protein, C terminal SB48_HM08orf03086 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain SB48_HM08orf03086 SM00387 Histidine kinase-like ATPases SB48_HM08orf03086 SM00388 His Kinase A (phosphoacceptor) domain SB48_HM08orf03089 SM00257 Lysin motif SB48_HM08orf03100 SM00487 DEAD-like helicases superfamily SB48_HM08orf03100 SM00490 helicase superfamily c-terminal domain SB48_HM08orf03113 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase SB48_HM08orf03131 SM00316 Ribosomal protein S1-like RNA-binding domain SB48_HM08orf03146 SM00411 bacterial (prokaryotic) histone like domain SB48_HM08orf03156 SM00562 SB48_HM08orf03156 SB48_HM08orf03157 SM00138 Methyltransferase, chemotaxis proteins SB48_HM08orf03171 SM00028 Tetratricopeptide repeats SB48_HM08orf03173 SM00914 SB48_HM08orf03173 SB48_HM08orf03202 SM00479 SB48_HM08orf03202 SB48_HM08orf03202 SM00487 DEAD-like helicases superfamily SB48_HM08orf03202 SM00491 SB48_HM08orf03202 SB48_HM08orf03211 SM00278 Helix-hairpin-helix DNA-binding motif class 1 SB48_HM08orf03211 SM00478 endonuclease III SB48_HM08orf03211 SM00525 SB48_HM08orf03211 SB48_HM08orf03228 SM00487 DEAD-like helicases superfamily SB48_HM08orf03228 SM00490 helicase superfamily c-terminal domain SB48_HM08orf03243 SM00981 SB48_HM08orf03243 SB48_HM08orf03252 SM00244 prohibitin homologues SB48_HM08orf03259 SM00422 helix_turn_helix, mercury resistance SB48_HM08orf03262 SM01230 SB48_HM08orf03262 SB48_HM08orf03267 SM00487 DEAD-like helicases superfamily SB48_HM08orf03267 SM00490 helicase superfamily c-terminal domain SB48_HM08orf03269 SM00479 SB48_HM08orf03269 SB48_HM08orf03275 SM00530 Helix-turn-helix XRE-family like proteins SB48_HM08orf03276 SM00530 Helix-turn-helix XRE-family like proteins SB48_HM08orf03327 SM00257 Lysin motif SB48_HM08orf03327 SM00646 SB48_HM08orf03327 SB48_HM08orf03332 SM00257 Lysin motif SB48_HM08orf03333 SM00857 Resolvase, N terminal domain SB48_HM08orf03336 SM00861 Transketolase, pyrimidine binding domain SB48_HM08orf03343 SM00448 cheY-homologous receiver domain SB48_HM08orf03352 SM00563 Phosphate acyltransferases SB48_HM08orf03363 SM00357 Cold shock protein domain SB48_HM08orf03369 SM00859 Semialdehyde dehydrogenase, NAD binding domain SB48_HM08orf03374 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain SB48_HM08orf03375 SM00851 MGS-like domain SB48_HM08orf03375 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain SB48_HM08orf03383 SM00899 SB48_HM08orf03383 SB48_HM08orf03392 SM00422 helix_turn_helix, mercury resistance SB48_HM08orf03405 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase SB48_HM08orf03413 SM00450 Rhodanese Homology Domain SB48_HM08orf03419 SM00822 SB48_HM08orf03419 SB48_HM08orf03424 SM01350 SB48_HM08orf03424 SB48_HM08orf03435 SM00382 ATPases associated with a variety of cellular activities SB48_HM08orf03459 SM00642 Alpha-amylase domain SB48_HM08orf03502 SM00506 Appr-1"-p processing enzyme SB48_HM08orf03511 SM00849 Metallo-beta-lactamase superfamily SB48_HM08orf03516 SM00382 ATPases associated with a variety of cellular activities SB48_HM08orf03520 SM00861 Transketolase, pyrimidine binding domain SB48_HM08orf03528 SM00422 helix_turn_helix, mercury resistance SB48_HM08orf03591 SM01329 SB48_HM08orf03591 SB48_HM08orf03617 SM00434 DNA Topoisomerase IV SB48_HM08orf03620 SM00387 Histidine kinase-like ATPases SB48_HM08orf03620 SM00433 TopoisomeraseII SB48_HM08orf03623 SM00881 CoA binding domain SB48_HM08orf03626 SM01207 SB48_HM08orf03626 SB48_HM08orf03660 SM00382 ATPases associated with a variety of cellular activities SB48_HM08orf03661 SM00382 ATPases associated with a variety of cellular activities SB48_HM08orf03680 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor SB48_HM08orf03690 SM00448 cheY-homologous receiver domain SB48_HM08orf03690 SM00862 Transcriptional regulatory protein, C terminal SB48_HM08orf03692 SM00387 Histidine kinase-like ATPases SB48_HM08orf03693 SM00382 ATPases associated with a variety of cellular activities SB48_HM08orf03703 SM00357 Cold shock protein domain SB48_HM08orf03749 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain SB48_HM08orf03749 SM00437 Bacterial DNA topoisomerase I DNA-binding domain SB48_HM08orf03749 SM00493 SB48_HM08orf03749 SB48_HM08orf03751 SM00257 Lysin motif SB48_HM08orf03753 SM00116 Domain in cystathionine beta-synthase and other proteins. SB48_HM08orf03754 SM00849 Metallo-beta-lactamase superfamily SB48_HM08orf03765 SM00450 Rhodanese Homology Domain SB48_HM08orf03767 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain SB48_HM08orf03767 SM00437 Bacterial DNA topoisomerase I DNA-binding domain SB48_HM08orf03767 SM00493 SB48_HM08orf03767 SB48_HM08orf03781 SM00861 Transketolase, pyrimidine binding domain SB48_HM08orf03786 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain SB48_HM08orf03786 SM00387 Histidine kinase-like ATPases SB48_HM08orf03786 SM00388 His Kinase A (phosphoacceptor) domain SB48_HM08orf03787 SM00448 cheY-homologous receiver domain SB48_HM08orf03787 SM00862 Transcriptional regulatory protein, C terminal SB48_HM08orf03802 SM00014 Acid phosphatase homologues SB48_HM08orf03805 SM00559 Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen SB48_HM08orf03822 SM00347 helix_turn_helix multiple antibiotic resistance protein SB48_HM08orf03824 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. SB48_HM08orf03824 SM00245 tail specific protease SB48_HM08orf03840 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). SB48_HM08orf03840 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain SB48_HM08orf03862 SM00567 E-Z type HEAT repeats SB48_HM08orf03862 SM00932 Scaffold protein Nfu/NifU N terminal SB48_HM08orf03864 SM00382 ATPases associated with a variety of cellular activities SB48_HM08orf03865 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. SB48_HM08orf03871 SM00529 Helix-turn-helix diphteria tox regulatory element SB48_HM08orf03872 SM00357 Cold shock protein domain SB48_HM08orf03880 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs SB48_HM08orf03880 SM00475 5'-3' exonuclease SB48_HM08orf03885 SM00382 ATPases associated with a variety of cellular activities SB48_HM08orf03899 SM00894 Excalibur calcium-binding domain SB48_HM08orf03902 SM00853 MutL C terminal dimerisation domain SB48_HM08orf03902 SM01340 SB48_HM08orf03902 SB48_HM08orf03904 SM00533 DNA-binding domain of DNA mismatch repair MUTS family SB48_HM08orf03904 SM00534 ATPase domain of DNA mismatch repair MUTS family SB48_HM08orf03909 SM00729 Elongator protein 3, MiaB family, Radical SAM SB48_HM08orf03922 SM00091 PAS domain SB48_HM08orf03922 SM00382 ATPases associated with a variety of cellular activities SB48_HM08orf03935 SM00322 K homology RNA-binding domain SB48_HM08orf03935 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. SB48_HM08orf03938 SM00382 ATPases associated with a variety of cellular activities SB48_HM08orf03940 SM00852 Probable molybdopterin binding domain SB48_HM08orf03942 SM00530 Helix-turn-helix XRE-family like proteins SB48_HM08orf03948 SM00822 SB48_HM08orf03948 SB48_HM08orf03956 SM00382 ATPases associated with a variety of cellular activities SB48_HM08orf03960 SM00382 ATPases associated with a variety of cellular activities SB48_HM08orf03960 SM00843 SB48_HM08orf03960 SB48_HM08orf03964 SM00849 Metallo-beta-lactamase superfamily SB48_HM08orf03967 SM01130 SB48_HM08orf03967 SB48_HM08orf03971 SM00859 Semialdehyde dehydrogenase, NAD binding domain SB48_HM08orf03983 SM00316 Ribosomal protein S1-like RNA-binding domain SB48_HM08orf03983 SM00322 K homology RNA-binding domain SB48_HM08orf03984 SM01387 SB48_HM08orf03984 SB48_HM08orf03986 SM00904 Riboflavin kinase SB48_HM08orf04001 SM00316 Ribosomal protein S1-like RNA-binding domain SB48_HM08orf04001 SM00322 K homology RNA-binding domain SB48_HM08orf04004 SM00479 SB48_HM08orf04004 SB48_HM08orf04004 SM00481 DNA polymerase alpha chain like domain SB48_HM08orf04011 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. SB48_HM08orf04038 SM00260 Two component signalling adaptor domain SB48_HM08orf04041 SM00073 Histidine Phosphotransfer domain SB48_HM08orf04041 SM00260 Two component signalling adaptor domain SB48_HM08orf04041 SM00387 Histidine kinase-like ATPases SB48_HM08orf04041 SM01231 SB48_HM08orf04041 SB48_HM08orf04046 SM00962 SRP54-type protein, GTPase domain SB48_HM08orf04056 SM00448 cheY-homologous receiver domain SB48_HM08orf04076 SM00382 ATPases associated with a variety of cellular activities SB48_HM08orf04091 SM00382 ATPases associated with a variety of cellular activities SB48_HM08orf04091 SM01086 C-terminal, D2-small domain, of ClpB protein SB48_HM08orf04105 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain SB48_HM08orf04105 SM00437 Bacterial DNA topoisomerase I DNA-binding domain SB48_HM08orf04105 SM00493 SB48_HM08orf04105 SB48_HM08orf04108 SM00881 CoA binding domain SB48_HM08orf04131 SM00382 ATPases associated with a variety of cellular activities SB48_HM08orf04131 SM00962 SRP54-type protein, GTPase domain SB48_HM08orf04131 SM00963 SRP54-type protein, helical bundle domain SB48_HM08orf04137 SM00382 ATPases associated with a variety of cellular activities SB48_HM08orf04137 SM00962 SRP54-type protein, GTPase domain SB48_HM08orf04137 SM00963 SRP54-type protein, helical bundle domain SB48_HM08orf04138 SM00968 SMC proteins Flexible Hinge Domain SB48_HM08orf04139 SM00358 Double-stranded RNA binding motif SB48_HM08orf04139 SM00535 Ribonuclease III family SB48_HM08orf04141 SM00822 SB48_HM08orf04141 SB48_HM08orf04143 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. SB48_HM08orf04147 SM00487 DEAD-like helicases superfamily SB48_HM08orf04147 SM00490 helicase superfamily c-terminal domain SB48_HM08orf04154 SM01120 SB48_HM08orf04154 SB48_HM08orf04154 SM01121 SB48_HM08orf04154 SB48_HM08orf04159 SM00983 Thiamin pyrophosphokinase, vitamin B1 binding domain SB48_HM08orf04164 SM00220 Serine/Threonine protein kinases, catalytic domain SB48_HM08orf04164 SM00740 SB48_HM08orf04164 SB48_HM08orf04165 SM00331 Sigma factor PP2C-like phosphatases SB48_HM08orf04165 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain SB48_HM08orf04172 SM00487 DEAD-like helicases superfamily SB48_HM08orf04172 SM00490 helicase superfamily c-terminal domain SB48_HM08orf04176 SM01409 SB48_HM08orf04176 SB48_HM08orf04177 SM00072 Guanylate kinase homologues. SB48_HM08orf04182 SM00831 Cation transporter/ATPase, N-terminus SB48_HM08orf04215 SM00062 Bacterial periplasmic substrate-binding proteins SB48_HM08orf04217 SM00382 ATPases associated with a variety of cellular activities SB48_HM08orf04228 SM00851 MGS-like domain SB48_HM08orf04232 SM01007 Class II Aldolase and Adducin N-terminal domain SB48_HM08orf04237 SM00342 helix_turn_helix, arabinose operon control protein SB48_HM08orf04250 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family SB48_HM08orf04254 SM00851 MGS-like domain SB48_HM08orf04254 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain SB48_HM08orf04255 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain SB48_HM08orf04265 SM00363 S4 RNA-binding domain SB48_HM08orf04274 SM00363 S4 RNA-binding domain SB48_HM08orf04280 SM00257 Lysin motif SB48_HM08orf04289 SM00864 Tubulin/FtsZ family, GTPase domain SB48_HM08orf04289 SM00865 Tubulin/FtsZ family, C-terminal domain SB48_HM08orf04292 SM00842 Cell division protein FtsA SB48_HM08orf04309 SM00740 SB48_HM08orf04309 SB48_HM08orf04310 SM00740 SB48_HM08orf04310 SB48_HM08orf04338 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. SB48_HM08orf04366 SM00198 SCP / Tpx-1 / Ag5 / PR-1 / Sc7 family of extracellular domains. SB48_HM08orf04384 SM00670 Large family of predicted nucleotide-binding domains SB48_HM08orf04390 SM00838 Elongation factor G C-terminus SB48_HM08orf04408 SM00861 Transketolase, pyrimidine binding domain SB48_HM08orf04415 SM00849 Metallo-beta-lactamase superfamily SB48_HM08orf04449 SM00260 Two component signalling adaptor domain SB48_HM08orf04449 SM00448 cheY-homologous receiver domain SB48_HM08orf04477 SM00382 ATPases associated with a variety of cellular activities SB48_HM08orf04477 SM01086 C-terminal, D2-small domain, of ClpB protein SB48_HM08orf04493 SM00091 PAS domain SB48_HM08orf04493 SM00388 His Kinase A (phosphoacceptor) domain SB48_HM08orf04512 SM00387 Histidine kinase-like ATPases SB48_HM08orf04512 SM00388 His Kinase A (phosphoacceptor) domain SB48_HM08orf04563 SM00354 helix_turn _helix lactose operon repressor SB48_HM08orf04582 SM00342 helix_turn_helix, arabinose operon control protein SB48_HM08orf04587 SM00344 helix_turn_helix ASNC type SB48_HM08orf04597 SM00382 ATPases associated with a variety of cellular activities SB48_HM08orf04603 SM00885 D5 N terminal like SB48_HM08orf04620 SM00382 ATPases associated with a variety of cellular activities SB48_HM08orf04697 SM00954 Region found in RelA / SpoT proteins SB48_HM08orf04700 SM01118 SB48_HM08orf04700 SB48_HM08orf04742 SM00382 ATPases associated with a variety of cellular activities SB48_HM08orf04743 SM00382 ATPases associated with a variety of cellular activities SB48_HM08orf04761 SM00382 ATPases associated with a variety of cellular activities SB48_HM08orf04762 SM00382 ATPases associated with a variety of cellular activities SB48_HM08orf04769 SM00825 Beta-ketoacyl synthase SB48_HM08orf04783 SM00382 ATPases associated with a variety of cellular activities SB48_HM08orf04783 SM01086 C-terminal, D2-small domain, of ClpB protein SB48_HM08orf04854 SM00420 helix_turn_helix, Deoxyribose operon repressor SB48_HM08orf04854 SM01134 SB48_HM08orf04854 SB48_HM08orf04879 SM00382 ATPases associated with a variety of cellular activities SB48_HM08orf04889 SM00347 helix_turn_helix multiple antibiotic resistance protein SB48_HM08orf04898 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. SB48_HM08orf04926 SM00382 ATPases associated with a variety of cellular activities SB48_HM08orf04957 SM00028 Tetratricopeptide repeats SB48_HM08orf04990 SM00382 ATPases associated with a variety of cellular activities SB48_HM08orf04992 SM00487 DEAD-like helicases superfamily SB48_HM08orf04992 SM00490 helicase superfamily c-terminal domain SB48_HM08orf05011 SM00382 ATPases associated with a variety of cellular activities SB48_HM08orf05013 SM00382 ATPases associated with a variety of cellular activities SB48_HM08orf05034 SM00091 PAS domain SB48_HM08orf05034 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain SB48_HM08orf05034 SM00387 Histidine kinase-like ATPases SB48_HM08orf05034 SM00388 His Kinase A (phosphoacceptor) domain SB48_HM08orf05035 SM00448 cheY-homologous receiver domain SB48_HM08orf05035 SM00862 Transcriptional regulatory protein, C terminal SB48_HM08orf05043 SM00382 ATPases associated with a variety of cellular activities SB48_HM08orf05050 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. SB48_HM08orf05054 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. SB48_HM08orf05054 SM00245 tail specific protease SB48_HM08orf05059 SM00155 Phospholipase D. Active site motifs. SB48_HM08orf05065 SM00382 ATPases associated with a variety of cellular activities SB48_HM08orf05070 SM00937 SB48_HM08orf05070 SB48_HM08orf05074 SM00957 SecA DEAD-like domain SB48_HM08orf05074 SM00958 SecA preprotein cross-linking domain SB48_HM08orf05138 SM00487 DEAD-like helicases superfamily SB48_HM08orf05138 SM00490 helicase superfamily c-terminal domain SB48_HM08orf05148 SM00421 helix_turn_helix, Lux Regulon SB48_HM08orf05148 SM00448 cheY-homologous receiver domain SB48_HM08orf05149 SM00387 Histidine kinase-like ATPases SB48_HM08orf05158 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). SB48_HM08orf05161 SM00257 Lysin motif SB48_HM08orf05163 SM00345 helix_turn_helix gluconate operon transcriptional repressor SB48_HM08orf05163 SM00866 SB48_HM08orf05163 SB48_HM08orf05195 SM00354 helix_turn _helix lactose operon repressor SB48_HM08orf05296 SM00354 helix_turn _helix lactose operon repressor SB48_HM08orf05303 SM00829 Enoylreductase SB48_HM08orf05306 SM00028 Tetratricopeptide repeats SB48_HM08orf05323 SM00422 helix_turn_helix, mercury resistance SB48_HM08orf05340 SM00487 DEAD-like helicases superfamily SB48_HM08orf05340 SM00490 helicase superfamily c-terminal domain SB48_HM08orf05371 SM00382 ATPases associated with a variety of cellular activities SB48_HM08orf05396 SM00382 ATPases associated with a variety of cellular activities SB48_HM08orf05411 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. SB48_HM08orf05440 SM00382 ATPases associated with a variety of cellular activities SB48_HM08orf05452 SM00829 Enoylreductase SB48_HM08orf05459 SM00342 helix_turn_helix, arabinose operon control protein SB48_HM08orf05474 SM00382 ATPases associated with a variety of cellular activities SB48_HM08orf05476 SM00116 Domain in cystathionine beta-synthase and other proteins. SB48_HM08orf05520 SM00345 helix_turn_helix gluconate operon transcriptional repressor SB48_HM08orf05520 SM00895 SB48_HM08orf05520 SB48_HM08orf05527 SM00342 helix_turn_helix, arabinose operon control protein SB48_HM08orf05527 SM00448 cheY-homologous receiver domain SB48_HM08orf05547 SM00849 Metallo-beta-lactamase superfamily SB48_HM08orf05558 SM00091 PAS domain SB48_HM08orf05558 SM00116 Domain in cystathionine beta-synthase and other proteins. SB48_HM08orf05558 SM00382 ATPases associated with a variety of cellular activities SB48_HM08orf05575 SM00382 ATPases associated with a variety of cellular activities SB48_HM08orf05577 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). SB48_HM08orf05602 SM00382 ATPases associated with a variety of cellular activities SB48_HM08orf05611 SM00849 Metallo-beta-lactamase superfamily SB48_HM08orf05626 SM01266 SB48_HM08orf05626 SB48_HM08orf05630 SM00116 Domain in cystathionine beta-synthase and other proteins. SB48_HM08orf05630 SM00382 ATPases associated with a variety of cellular activities SB48_HM08orf05638 SM00354 helix_turn _helix lactose operon repressor SB48_HM08orf05641 SM00347 helix_turn_helix multiple antibiotic resistance protein SB48_HM08orf05644 SM00342 helix_turn_helix, arabinose operon control protein SB48_HM08orf05663 SM00829 Enoylreductase SB48_HM08orf05688 SM00849 Metallo-beta-lactamase superfamily SB48_HM08orf05705 SM00382 ATPases associated with a variety of cellular activities SB48_HM08orf05707 SM01007 Class II Aldolase and Adducin N-terminal domain SB48_HM08orf05722 SM00382 ATPases associated with a variety of cellular activities SB48_HM08orf05728 SM00530 Helix-turn-helix XRE-family like proteins SB48_HM08orf05731 SM00345 helix_turn_helix gluconate operon transcriptional repressor SB48_HM08orf05731 SM00866 SB48_HM08orf05731 SB48_HM08orf05767 SM00047 Lysozyme subfamily 2 SB48_HM08orf05767 SM00287 Bacterial SH3 domain homologues SB48_HM08orf05793 SM00530 Helix-turn-helix XRE-family like proteins SB48_HM08orf05808 SM00984 UDP binding domain SB48_HM08orf05834 SM01018 B12 binding domain SB48_HM08orf05856 SM00345 helix_turn_helix gluconate operon transcriptional repressor SB48_HM08orf05860 SM00062 Bacterial periplasmic substrate-binding proteins SB48_HM08orf05860 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. SB48_HM08orf05866 SM00382 ATPases associated with a variety of cellular activities SB48_HM08orf05885 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. SB48_HM08orf05898 SM00867 YceI-like domain SB48_HM08orf05909 SM00100 Cyclic nucleotide-monophosphate binding domain SB48_HM08orf05909 SM00419 helix_turn_helix, cAMP Regulatory protein SB48_HM08orf05927 SM00448 cheY-homologous receiver domain SB48_HM08orf05929 SM00387 Histidine kinase-like ATPases SB48_HM08orf05983 SM00382 ATPases associated with a variety of cellular activities SB48_HM08orf05984 SM00530 Helix-turn-helix XRE-family like proteins SB48_HM08orf06001 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family SB48_HM08orf06007 SM00354 helix_turn _helix lactose operon repressor SB48_HM08orf06067 SM00267 diguanylate cyclase SB48_HM08orf06088 SM00710 Parallel beta-helix repeats SB48_HM08orf06109 SM00822 SB48_HM08orf06109 SB48_HM08orf06126 SM00382 ATPases associated with a variety of cellular activities SB48_HM08orf06150 SM01207 SB48_HM08orf06150 SB48_HM08orf06162 SM00100 Cyclic nucleotide-monophosphate binding domain SB48_HM08orf06162 SM00419 helix_turn_helix, cAMP Regulatory protein SB48_HM08orf06166 SM00465 GIY-YIG type nucleases (URI domain) SB48_HM08orf06172 SM01350 SB48_HM08orf06172 SB48_HM08orf06175 SM00345 helix_turn_helix gluconate operon transcriptional repressor SB48_HM08orf06175 SM00895 SB48_HM08orf06175 SB48_HM08orf06185 SM00345 helix_turn_helix gluconate operon transcriptional repressor SB48_HM08orf06185 SM00866 SB48_HM08orf06185 SB48_HM08orf06187 SM00642 Alpha-amylase domain SB48_HM08orf06194 SM00382 ATPases associated with a variety of cellular activities SB48_HM08orf06236 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor SB48_HM08orf06253 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). SB48_HM08orf06253 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain SB48_HM08orf06253 SM01049 SB48_HM08orf06253 SB48_HM08orf06260 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). SB48_HM08orf06302 SM00257 Lysin motif SB48_HM08orf06357 SM01040 BRO family, N-terminal domain SB48_HM08orf06358 SM00530 Helix-turn-helix XRE-family like proteins SB48_HM08orf06364 SM00318 Staphylococcal nuclease homologues SB48_HM08orf06364 SM00894 Excalibur calcium-binding domain SB48_HM08orf06379 SM00382 ATPases associated with a variety of cellular activities SB48_HM08orf06381 SM00382 ATPases associated with a variety of cellular activities SB48_HM08orf06393 SM01251 SB48_HM08orf06393 SB48_HM08orf06398 SM00646 SB48_HM08orf06398 SB48_HM08orf06417 SM00382 ATPases associated with a variety of cellular activities SB48_HM08orf06418 SM00382 ATPases associated with a variety of cellular activities SB48_HM08orf06422 SM00662 RNA polymerases D SB48_HM08orf06426 SM00316 Ribosomal protein S1-like RNA-binding domain SB48_HM08orf06445 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. SB48_HM08orf06446 SM01374 SB48_HM08orf06446 SB48_HM08orf06450 SM00322 K homology RNA-binding domain SB48_HM08orf06453 SM01382 SB48_HM08orf06453 SB48_HM08orf06453 SM01383 SB48_HM08orf06453 SB48_HM08orf06460 SM01403 SB48_HM08orf06460 SB48_HM08orf06463 SM00838 Elongation factor G C-terminus SB48_HM08orf06463 SM00889 Elongation factor G, domain IV SB48_HM08orf06470 SM00663 RNA polymerase I subunit A N-terminus SB48_HM08orf06482 SM00649 Ribosomal protein L11/L12 SB48_HM08orf06483 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. SB48_HM08orf06483 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. SB48_HM08orf06487 SM00421 helix_turn_helix, Lux Regulon SB48_HM08orf06489 SM00967 RNA 2'-O ribose methyltransferase substrate binding SB48_HM08orf06490 SM00535 Ribonuclease III family SB48_HM08orf06491 SM00840 SB48_HM08orf06491 SB48_HM08orf06503 SM00670 Large family of predicted nucleotide-binding domains SB48_HM08orf06506 SM00382 ATPases associated with a variety of cellular activities SB48_HM08orf06507 SM00382 ATPases associated with a variety of cellular activities SB48_HM08orf06507 SM01086 C-terminal, D2-small domain, of ClpB protein SB48_HM08orf06524 SM00493 SB48_HM08orf06524 SB48_HM08orf06528 SM00382 ATPases associated with a variety of cellular activities SB48_HM08orf06540 SM00257 Lysin motif SB48_HM08orf06540 SM00636 SB48_HM08orf06540 SB48_HM08orf06552 SM00936 Penicillin-binding protein 5, C-terminal domain SB48_HM08orf06556 SM00116 Domain in cystathionine beta-synthase and other proteins. SB48_HM08orf06556 SM01240 SB48_HM08orf06556 SB48_HM08orf06570 SM00905 Dihydroneopterin aldolase SB48_HM08orf06578 SM00382 ATPases associated with a variety of cellular activities SB48_HM08orf06580 SM00977 TilS substrate C-terminal domain SB48_HM08orf06583 SM00220 Serine/Threonine protein kinases, catalytic domain SB48_HM08orf06586 SM00331 Sigma factor PP2C-like phosphatases SB48_HM08orf06586 SM00332 Serine/threonine phosphatases, family 2C, catalytic domain SB48_HM08orf06592 SM00316 Ribosomal protein S1-like RNA-binding domain SB48_HM08orf06597 SM00363 S4 RNA-binding domain SB48_HM08orf06604 SM00966 SpoVT / AbrB like domain SB48_HM08orf06608 SM00487 DEAD-like helicases superfamily SB48_HM08orf06608 SM00490 helicase superfamily c-terminal domain SB48_HM08orf06608 SM00982 SB48_HM08orf06608 SB48_HM08orf06608 SM01058 CarD-like/TRCF domain SB48_HM08orf06618 SM01400 SB48_HM08orf06618 SB48_HM08orf06639 SM00650 Ribosomal RNA adenine dimethylases SB48_HM08orf06641 SM00493 SB48_HM08orf06641 SB48_HM08orf06649 SM00966 SpoVT / AbrB like domain SB48_HM08orf06669 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. SB48_HM08orf06671 SM00434 DNA Topoisomerase IV SB48_HM08orf06673 SM00387 Histidine kinase-like ATPases SB48_HM08orf06673 SM00433 TopoisomeraseII SB48_HM08orf06682 SM00480 DNA polymerase III beta subunit