CG475_000005	SM00382	ATPases associated with a variety of cellular activities
CG475_000005	SM00760	Bacterial dnaA protein helix-turn-helix domain
CG475_000010	SM00480	DNA polymerase III beta subunit
CG475_000025	SM00387	Histidine kinase-like ATPases
CG475_000025	SM00433	TopoisomeraseII
CG475_000030	SM00434	DNA Topoisomerase IV
CG475_000065	SM00116	Domain in cystathionine beta-synthase and other proteins.
CG475_000065	SM01240	CG475_000065
CG475_000070	SM00936	Penicillin-binding protein 5, C-terminal domain 
CG475_000125	SM00382	ATPases associated with a variety of cellular activities
CG475_000135	SM00493	CG475_000135
CG475_000220	SM00966	SpoVT / AbrB like domain 
CG475_000235	SM00493	CG475_000235
CG475_000240	SM00650	Ribosomal RNA adenine dimethylases
CG475_000285	SM01400	CG475_000285
CG475_000300	SM00487	DEAD-like helicases superfamily
CG475_000300	SM00490	helicase superfamily c-terminal domain
CG475_000300	SM00982	CG475_000300
CG475_000300	SM01058	CarD-like/TRCF domain
CG475_000305	SM00966	SpoVT / AbrB like domain 
CG475_000320	SM00363	S4 RNA-binding domain
CG475_000340	SM00316	Ribosomal protein S1-like RNA-binding domain
CG475_000355	SM00331	Sigma factor PP2C-like phosphatases
CG475_000355	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
CG475_000360	SM00977	TilS substrate C-terminal domain
CG475_000370	SM00382	ATPases associated with a variety of cellular activities
CG475_000410	SM00905	Dihydroneopterin aldolase
CG475_000420	SM00530	Helix-turn-helix XRE-family like proteins 
CG475_000525	SM00382	ATPases associated with a variety of cellular activities
CG475_000525	SM01086	C-terminal, D2-small domain, of ClpB protein
CG475_000530	SM00382	ATPases associated with a variety of cellular activities
CG475_000540	SM00670	Large family of predicted nucleotide-binding domains
CG475_000565	SM00840	CG475_000565
CG475_000570	SM00535	Ribonuclease III family
CG475_000575	SM00967	RNA 2'-O ribose methyltransferase substrate binding
CG475_000585	SM00421	helix_turn_helix, Lux Regulon
CG475_000600	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
CG475_000605	SM00649	Ribosomal protein L11/L12
CG475_000635	SM00663	RNA polymerase I subunit A N-terminus
CG475_000655	SM00838	Elongation factor G C-terminus
CG475_000655	SM00889	Elongation factor G, domain IV
CG475_000665	SM01403	CG475_000665
CG475_000685	SM01382	CG475_000685
CG475_000685	SM01383	CG475_000685
CG475_000700	SM00322	K homology RNA-binding domain
CG475_000720	SM01374	CG475_000720
CG475_000725	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
CG475_000785	SM00316	Ribosomal protein S1-like RNA-binding domain
CG475_000805	SM00662	RNA polymerases D
CG475_000815	SM00382	ATPases associated with a variety of cellular activities
CG475_000820	SM00382	ATPases associated with a variety of cellular activities
CG475_000850	SM00646	CG475_000850
CG475_000865	SM01251	CG475_000865
CG475_000920	SM00530	Helix-turn-helix XRE-family like proteins 
CG475_001090	SM00382	ATPases associated with a variety of cellular activities
CG475_001105	SM00530	Helix-turn-helix XRE-family like proteins 
CG475_001110	SM00729	Elongator protein 3, MiaB family, Radical SAM
CG475_001270	SM00382	ATPases associated with a variety of cellular activities
CG475_001275	SM00382	ATPases associated with a variety of cellular activities
CG475_001290	SM00342	helix_turn_helix, arabinose operon control protein
CG475_001340	SM00563	Phosphate acyltransferases
CG475_001400	SM00387	Histidine kinase-like ATPases
CG475_001405	SM00421	helix_turn_helix, Lux Regulon
CG475_001405	SM00448	cheY-homologous receiver domain
CG475_001410	SM00382	ATPases associated with a variety of cellular activities
CG475_001445	SM00382	ATPases associated with a variety of cellular activities
CG475_001450	SM00382	ATPases associated with a variety of cellular activities
CG475_001505	SM00487	DEAD-like helicases superfamily
CG475_001505	SM00490	helicase superfamily c-terminal domain
CG475_001525	SM01005	Alanine racemase, C-terminal domain
CG475_001540	SM00316	Ribosomal protein S1-like RNA-binding domain
CG475_001540	SM00732	Likely ribonuclease with RNase H fold.
CG475_001550	SM00731	SprT homologues.
CG475_001660	SM00382	ATPases associated with a variety of cellular activities
CG475_001665	SM00881	CoA binding domain
CG475_001680	SM00883	Chaperonin 10 Kd subunit
CG475_001700	SM00448	cheY-homologous receiver domain
CG475_001700	SM00862	Transcriptional regulatory protein, C terminal
CG475_001705	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CG475_001705	SM00387	Histidine kinase-like ATPases
CG475_001705	SM00388	His Kinase A (phosphoacceptor) domain
CG475_001755	SM01022	CG475_001755
CG475_001770	SM00382	ATPases associated with a variety of cellular activities
CG475_001775	SM00387	Histidine kinase-like ATPases
CG475_001775	SM00388	His Kinase A (phosphoacceptor) domain
CG475_001780	SM00448	cheY-homologous receiver domain
CG475_001780	SM00862	Transcriptional regulatory protein, C terminal
CG475_001825	SM01001	AIR carboxylase
CG475_001835	SM00998	Adenylosuccinate lyase C-terminus
CG475_001850	SM01211	CG475_001850
CG475_001875	SM00798	AICARFT/IMPCHase bienzyme
CG475_001875	SM00851	MGS-like domain
CG475_001880	SM01209	CG475_001880
CG475_001880	SM01210	CG475_001880
CG475_001900	SM00244	prohibitin homologues
CG475_001920	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CG475_001920	SM00292	breast cancer carboxy-terminal domain
CG475_001920	SM00532	Ligase N family
CG475_001945	SM00382	ATPases associated with a variety of cellular activities
CG475_001945	SM00930	CG475_001945
CG475_001985	SM00845	GatB domain
CG475_001990	SM00046	Diacylglycerol kinase catalytic domain (presumed)
CG475_002010	SM00382	ATPases associated with a variety of cellular activities
CG475_002110	SM00382	ATPases associated with a variety of cellular activities
CG475_002160	SM00387	Histidine kinase-like ATPases
CG475_002160	SM00388	His Kinase A (phosphoacceptor) domain
CG475_002210	SM00062	Bacterial periplasmic substrate-binding proteins
CG475_002210	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
CG475_002215	SM00382	ATPases associated with a variety of cellular activities
CG475_002220	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CG475_002220	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CG475_002255	SM00100	Cyclic nucleotide-monophosphate binding domain
CG475_002255	SM00419	helix_turn_helix, cAMP Regulatory protein
CG475_002265	SM00642	Alpha-amylase domain
CG475_002285	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
CG475_002285	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
CG475_002285	SM00493	CG475_002285
CG475_002300	SM00382	ATPases associated with a variety of cellular activities
CG475_002325	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CG475_002325	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CG475_002350	SM00382	ATPases associated with a variety of cellular activities
CG475_002355	SM00060	Fibronectin type 3 domain
CG475_002355	SM00636	CG475_002355
CG475_002355	SM00637	CG475_002355
CG475_002455	SM00946	Prolyl-tRNA synthetase, C-terminal
CG475_002505	SM00226	Low molecular weight phosphatase family
CG475_002590	SM00478	endonuclease III
CG475_002640	SM00857	Resolvase, N terminal domain
CG475_002650	SM00530	Helix-turn-helix XRE-family like proteins 
CG475_002685	SM00984	UDP binding domain
CG475_002755	SM00478	endonuclease III
CG475_002755	SM00525	CG475_002755
CG475_002785	SM00382	ATPases associated with a variety of cellular activities
CG475_002805	SM00382	ATPases associated with a variety of cellular activities
CG475_002935	SM00860	SMI1 / KNR4 family
CG475_002950	SM00028	Tetratricopeptide repeats
CG475_002975	SM00567	E-Z type HEAT repeats
CG475_002995	SM00763	PrkA AAA domain
CG475_003030	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
CG475_003040	SM00857	Resolvase, N terminal domain
CG475_003045	SM00530	Helix-turn-helix XRE-family like proteins 
CG475_003055	SM00460	Transglutaminase/protease-like homologues
CG475_003065	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
CG475_003075	SM00244	prohibitin homologues
CG475_003080	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CG475_003080	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CG475_003100	SM00248	ankyrin repeats
CG475_003110	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CG475_003110	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CG475_003110	SM00319	Homologues of the ligand binding domain of Tar
CG475_003115	SM00091	PAS domain
CG475_003115	SM00387	Histidine kinase-like ATPases
CG475_003120	SM00448	cheY-homologous receiver domain
CG475_003130	SM00919	Malic enzyme, NAD binding domain
CG475_003130	SM01274	CG475_003130
CG475_003145	SM00387	Histidine kinase-like ATPases
CG475_003145	SM00388	His Kinase A (phosphoacceptor) domain
CG475_003150	SM00448	cheY-homologous receiver domain
CG475_003150	SM00862	Transcriptional regulatory protein, C terminal
CG475_003165	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CG475_003165	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
CG475_003180	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CG475_003180	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CG475_003185	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
CG475_003185	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
CG475_003205	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CG475_003220	SM00028	Tetratricopeptide repeats
CG475_003220	SM00530	Helix-turn-helix XRE-family like proteins 
CG475_003275	SM01091	Transporter associated domain
CG475_003295	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CG475_003330	SM00327	von Willebrand factor (vWF) type A domain
CG475_003335	SM00382	ATPases associated with a variety of cellular activities
CG475_003360	SM00382	ATPases associated with a variety of cellular activities
CG475_003365	SM00062	Bacterial periplasmic substrate-binding proteins
CG475_003365	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
CG475_003390	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CG475_003390	SM00387	Histidine kinase-like ATPases
CG475_003390	SM00388	His Kinase A (phosphoacceptor) domain
CG475_003395	SM00448	cheY-homologous receiver domain
CG475_003395	SM00862	Transcriptional regulatory protein, C terminal
CG475_003435	SM00382	ATPases associated with a variety of cellular activities
CG475_003440	SM00382	ATPases associated with a variety of cellular activities
CG475_003450	SM00347	helix_turn_helix multiple antibiotic resistance protein
CG475_003460	SM00354	helix_turn _helix lactose operon repressor
CG475_003475	SM00382	ATPases associated with a variety of cellular activities
CG475_003525	SM00770	Zinc dependent phospholipase C (alpha toxin)
CG475_003555	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CG475_003565	SM00530	Helix-turn-helix XRE-family like proteins 
CG475_003700	SM00899	CG475_003700
CG475_003845	SM00116	Domain in cystathionine beta-synthase and other proteins.
CG475_003860	SM00287	Bacterial SH3 domain homologues
CG475_003875	SM00382	ATPases associated with a variety of cellular activities
CG475_003980	SM00857	Resolvase, N terminal domain
CG475_004010	SM00347	helix_turn_helix multiple antibiotic resistance protein
CG475_004130	SM00382	ATPases associated with a variety of cellular activities
CG475_004265	SM00344	helix_turn_helix ASNC type
CG475_004295	SM00382	ATPases associated with a variety of cellular activities
CG475_004300	SM00382	ATPases associated with a variety of cellular activities
CG475_004310	SM00062	Bacterial periplasmic substrate-binding proteins
CG475_004310	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
CG475_004320	SM00382	ATPases associated with a variety of cellular activities
CG475_004355	SM00421	helix_turn_helix, Lux Regulon
CG475_004355	SM00448	cheY-homologous receiver domain
CG475_004430	SM00729	Elongator protein 3, MiaB family, Radical SAM
CG475_004455	SM00957	SecA DEAD-like domain
CG475_004455	SM00958	SecA preprotein cross-linking domain
CG475_004470	SM00635	Bacterial Ig-like domain 2
CG475_004525	SM00646	CG475_004525
CG475_004530	SM00646	CG475_004530
CG475_004640	SM00860	SMI1 / KNR4 family
CG475_004655	SM00530	Helix-turn-helix XRE-family like proteins 
CG475_004670	SM00530	Helix-turn-helix XRE-family like proteins 
CG475_004715	SM00382	ATPases associated with a variety of cellular activities
CG475_004720	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CG475_004765	SM00487	DEAD-like helicases superfamily
CG475_004765	SM00490	helicase superfamily c-terminal domain
CG475_004775	SM00487	DEAD-like helicases superfamily
CG475_004775	SM00490	helicase superfamily c-terminal domain
CG475_004785	SM00382	ATPases associated with a variety of cellular activities
CG475_004800	SM01329	CG475_004800
CG475_004820	SM00829	Enoylreductase
CG475_004895	SM01061	CAT RNA binding domain
CG475_004915	SM01120	CG475_004915
CG475_004960	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CG475_004980	SM00382	ATPases associated with a variety of cellular activities
CG475_004985	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CG475_004985	SM00387	Histidine kinase-like ATPases
CG475_004985	SM00388	His Kinase A (phosphoacceptor) domain
CG475_004990	SM00448	cheY-homologous receiver domain
CG475_004990	SM00862	Transcriptional regulatory protein, C terminal
CG475_005050	SM00347	helix_turn_helix multiple antibiotic resistance protein
CG475_005070	SM00382	ATPases associated with a variety of cellular activities
CG475_005175	SM00354	helix_turn _helix lactose operon repressor
CG475_005185	SM00849	Metallo-beta-lactamase superfamily
CG475_005215	SM00387	Histidine kinase-like ATPases
CG475_005215	SM00388	His Kinase A (phosphoacceptor) domain
CG475_005220	SM00448	cheY-homologous receiver domain
CG475_005220	SM00862	Transcriptional regulatory protein, C terminal
CG475_005245	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CG475_005245	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CG475_005275	SM00357	Cold shock protein domain
CG475_005370	SM01060	CG475_005370
CG475_005380	SM00642	Alpha-amylase domain
CG475_005390	SM00316	Ribosomal protein S1-like RNA-binding domain
CG475_005435	SM00382	ATPases associated with a variety of cellular activities
CG475_005435	SM01086	C-terminal, D2-small domain, of ClpB protein
CG475_005465	SM00825	Beta-ketoacyl synthase
CG475_005510	SM00382	ATPases associated with a variety of cellular activities
CG475_005515	SM00382	ATPases associated with a variety of cellular activities
CG475_005560	SM00155	Phospholipase D. Active site motifs.
CG475_005590	SM01118	CG475_005590
CG475_005600	SM00954	Region found in RelA / SpoT proteins
CG475_005770	SM00635	Bacterial Ig-like domain 2
CG475_005840	SM00861	Transketolase, pyrimidine binding domain
CG475_005855	SM01130	CG475_005855
CG475_006000	SM00028	Tetratricopeptide repeats
CG475_006105	SM00530	Helix-turn-helix XRE-family like proteins 
CG475_006125	SM00382	ATPases associated with a variety of cellular activities
CG475_006145	SM00014	Acid phosphatase homologues
CG475_006195	SM00448	cheY-homologous receiver domain
CG475_006195	SM00862	Transcriptional regulatory protein, C terminal
CG475_006200	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CG475_006200	SM00387	Histidine kinase-like ATPases
CG475_006200	SM00388	His Kinase A (phosphoacceptor) domain
CG475_006205	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CG475_006205	SM00895	CG475_006205
CG475_006320	SM00822	CG475_006320
CG475_006350	SM00382	ATPases associated with a variety of cellular activities
CG475_006370	SM00420	helix_turn_helix, Deoxyribose operon repressor
CG475_006370	SM01134	CG475_006370
CG475_006375	SM01007	Class II Aldolase and Adducin N-terminal domain
CG475_006395	SM00387	Histidine kinase-like ATPases
CG475_006395	SM00388	His Kinase A (phosphoacceptor) domain
CG475_006400	SM00347	helix_turn_helix multiple antibiotic resistance protein
CG475_006490	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CG475_006495	SM00382	ATPases associated with a variety of cellular activities
CG475_006505	SM00382	ATPases associated with a variety of cellular activities
CG475_006525	SM00344	helix_turn_helix ASNC type
CG475_006665	SM00347	helix_turn_helix multiple antibiotic resistance protein
CG475_006730	SM00917	LeuA allosteric (dimerisation) domain
CG475_006735	SM01329	CG475_006735
CG475_006910	SM00387	Histidine kinase-like ATPases
CG475_006915	SM00421	helix_turn_helix, Lux Regulon
CG475_006915	SM00448	cheY-homologous receiver domain
CG475_006970	SM00855	Phosphoglycerate mutase family
CG475_007045	SM00387	Histidine kinase-like ATPases
CG475_007045	SM00388	His Kinase A (phosphoacceptor) domain
CG475_007065	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CG475_007065	SM00387	Histidine kinase-like ATPases
CG475_007065	SM00388	His Kinase A (phosphoacceptor) domain
CG475_007115	SM00363	S4 RNA-binding domain
CG475_007135	SM00448	cheY-homologous receiver domain
CG475_007135	SM00862	Transcriptional regulatory protein, C terminal
CG475_007140	SM00091	PAS domain
CG475_007140	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CG475_007140	SM00387	Histidine kinase-like ATPases
CG475_007140	SM00388	His Kinase A (phosphoacceptor) domain
CG475_007150	SM00257	Lysin motif
CG475_007175	SM00487	DEAD-like helicases superfamily
CG475_007175	SM00490	helicase superfamily c-terminal domain
CG475_007185	SM00257	Lysin motif
CG475_007195	SM00422	helix_turn_helix, mercury resistance
CG475_007205	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
CG475_007215	SM00644	CG475_007215
CG475_007225	SM00870	CG475_007225
CG475_007240	SM00316	Ribosomal protein S1-like RNA-binding domain
CG475_007300	SM00411	bacterial (prokaryotic) histone like domain
CG475_007325	SM00562	CG475_007325
CG475_007350	SM00028	Tetratricopeptide repeats
CG475_007355	SM00914	CG475_007355
CG475_007400	SM00986	Uracil DNA glycosylase superfamily
CG475_007400	SM00987	UreE urease accessory protein, C-terminal domain 
CG475_007420	SM00851	MGS-like domain
CG475_007465	SM00479	CG475_007465
CG475_007465	SM00487	DEAD-like helicases superfamily
CG475_007465	SM00488	CG475_007465
CG475_007465	SM00491	CG475_007465
CG475_007490	SM00478	endonuclease III
CG475_007490	SM00525	CG475_007490
CG475_007500	SM00060	Fibronectin type 3 domain
CG475_007555	SM00981	CG475_007555
CG475_007565	SM00491	CG475_007565
CG475_007610	SM00450	Rhodanese Homology Domain
CG475_007650	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
CG475_007650	SM00475	5'-3' exonuclease
CG475_007705	SM00357	Cold shock protein domain
CG475_007735	SM00849	Metallo-beta-lactamase superfamily
CG475_007800	SM00448	cheY-homologous receiver domain
CG475_007805	SM00073	Histidine Phosphotransfer domain
CG475_007805	SM00260	Two component signalling adaptor domain
CG475_007805	SM00387	Histidine kinase-like ATPases
CG475_007805	SM01231	CG475_007805
CG475_007825	SM00138	Methyltransferase, chemotaxis proteins 
CG475_007900	SM00382	ATPases associated with a variety of cellular activities
CG475_007935	SM00260	Two component signalling adaptor domain
CG475_007935	SM00448	cheY-homologous receiver domain
CG475_008005	SM00382	ATPases associated with a variety of cellular activities
CG475_008005	SM00962	SRP54-type protein, GTPase domain
CG475_008015	SM00382	ATPases associated with a variety of cellular activities
CG475_008100	SM00347	helix_turn_helix multiple antibiotic resistance protein
CG475_008130	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CG475_008130	SM00895	CG475_008130
CG475_008205	SM00487	DEAD-like helicases superfamily
CG475_008205	SM00490	helicase superfamily c-terminal domain
CG475_008245	SM00047	Lysozyme subfamily 2
CG475_008265	SM00382	ATPases associated with a variety of cellular activities
CG475_008410	SM00450	Rhodanese Homology Domain
CG475_008435	SM01133	CG475_008435
CG475_008450	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
CG475_008450	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
CG475_008450	SM00493	CG475_008450
CG475_008480	SM00342	helix_turn_helix, arabinose operon control protein
CG475_008510	SM00833	Cobalamin synthesis protein cobW C-terminal domain
CG475_008550	SM00287	Bacterial SH3 domain homologues
CG475_008630	SM00460	Transglutaminase/protease-like homologues
CG475_008665	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CG475_008665	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CG475_008665	SM00319	Homologues of the ligand binding domain of Tar
CG475_008705	SM00833	Cobalamin synthesis protein cobW C-terminal domain
CG475_008805	SM00155	Phospholipase D. Active site motifs.
CG475_008830	SM01091	Transporter associated domain
CG475_008895	SM00244	prohibitin homologues
CG475_008905	SM00347	helix_turn_helix multiple antibiotic resistance protein
CG475_008930	SM01005	Alanine racemase, C-terminal domain
CG475_008945	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CG475_009090	SM00487	DEAD-like helicases superfamily
CG475_009090	SM00490	helicase superfamily c-terminal domain
CG475_009135	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CG475_009145	SM00226	Low molecular weight phosphatase family
CG475_009175	SM00829	Enoylreductase
CG475_009180	SM00646	CG475_009180
CG475_009190	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CG475_009195	SM00382	ATPases associated with a variety of cellular activities
CG475_009210	SM00567	E-Z type HEAT repeats
CG475_009210	SM00932	Scaffold protein Nfu/NifU N terminal
CG475_009230	SM00836	DALR anticodon binding domain
CG475_009230	SM01016	Arginyl tRNA synthetase N terminal dom
CG475_009315	SM00382	ATPases associated with a variety of cellular activities
CG475_009360	SM00563	Phosphate acyltransferases
CG475_009465	SM01350	CG475_009465
CG475_009530	SM00116	Domain in cystathionine beta-synthase and other proteins.
CG475_009530	SM01091	Transporter associated domain
CG475_009540	SM00387	Histidine kinase-like ATPases
CG475_009540	SM00388	His Kinase A (phosphoacceptor) domain
CG475_009560	SM00882	Coenzyme A transferase
CG475_009565	SM00882	Coenzyme A transferase
CG475_009580	SM00382	ATPases associated with a variety of cellular activities
CG475_009625	SM00219	Tyrosine kinase, catalytic domain
CG475_009630	SM00014	Acid phosphatase homologues
CG475_009715	SM00014	Acid phosphatase homologues
CG475_009850	SM00823	Phosphopantetheine attachment site
CG475_009870	SM00382	ATPases associated with a variety of cellular activities
CG475_009890	SM00382	ATPases associated with a variety of cellular activities
CG475_009920	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CG475_009935	SM00530	Helix-turn-helix XRE-family like proteins 
CG475_010005	SM00823	Phosphopantetheine attachment site
CG475_010005	SM00824	Thioesterase
CG475_010010	SM00923	MbtH-like protein
CG475_010030	SM00411	bacterial (prokaryotic) histone like domain
CG475_010050	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
CG475_010105	SM00357	Cold shock protein domain
CG475_010125	SM00382	ATPases associated with a variety of cellular activities
CG475_010130	SM00382	ATPases associated with a variety of cellular activities
CG475_010135	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CG475_010190	SM00487	DEAD-like helicases superfamily
CG475_010190	SM00490	helicase superfamily c-terminal domain
CG475_010195	SM00347	helix_turn_helix multiple antibiotic resistance protein
CG475_010200	SM00855	Phosphoglycerate mutase family
CG475_010245	SM00878	Biotin carboxylase C-terminal domain
CG475_010285	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CG475_010300	SM00387	Histidine kinase-like ATPases
CG475_010300	SM00388	His Kinase A (phosphoacceptor) domain
CG475_010305	SM00448	cheY-homologous receiver domain
CG475_010305	SM00862	Transcriptional regulatory protein, C terminal
CG475_010330	SM00422	helix_turn_helix, mercury resistance
CG475_010330	SM00871	Bacterial transcription activator, effector binding domain
CG475_010415	SM00966	SpoVT / AbrB like domain 
CG475_010420	SM00257	Lysin motif
CG475_010465	SM00465	GIY-YIG type nucleases (URI domain)
CG475_010505	SM00855	Phosphoglycerate mutase family
CG475_010615	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CG475_010675	SM00091	PAS domain
CG475_010675	SM00387	Histidine kinase-like ATPases
CG475_010675	SM00388	His Kinase A (phosphoacceptor) domain
CG475_010735	SM00028	Tetratricopeptide repeats
CG475_010850	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CG475_010860	SM00116	Domain in cystathionine beta-synthase and other proteins.
CG475_010860	SM00382	ATPases associated with a variety of cellular activities
CG475_010920	SM00341	Helicase and RNase D C-terminal
CG475_010920	SM00487	DEAD-like helicases superfamily
CG475_010920	SM00490	helicase superfamily c-terminal domain
CG475_010920	SM00956	CG475_010920
CG475_010935	SM00028	Tetratricopeptide repeats
CG475_010945	SM01131	CG475_010945
CG475_010960	SM00347	helix_turn_helix multiple antibiotic resistance protein
CG475_010965	SM00829	Enoylreductase
CG475_011005	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CG475_011080	SM00344	helix_turn_helix ASNC type
CG475_011130	SM00860	SMI1 / KNR4 family
CG475_011315	SM00849	Metallo-beta-lactamase superfamily
CG475_011365	SM00062	Bacterial periplasmic substrate-binding proteins
CG475_011370	SM00382	ATPases associated with a variety of cellular activities
CG475_011430	SM00382	ATPases associated with a variety of cellular activities
CG475_011435	SM00830	Chorismate mutase type II
CG475_011485	SM00487	DEAD-like helicases superfamily
CG475_011590	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CG475_011635	SM00014	Acid phosphatase homologues
CG475_011670	SM00797	Allophanate hydrolase subunit 2
CG475_011675	SM00796	Allophanate hydrolase subunit 1
CG475_011680	SM00346	helix_turn_helix isocitrate lyase regulation
CG475_011740	SM00984	UDP binding domain
CG475_011875	SM00857	Resolvase, N terminal domain
CG475_011940	SM00347	helix_turn_helix multiple antibiotic resistance protein
CG475_011990	SM00382	ATPases associated with a variety of cellular activities
CG475_012030	SM00382	ATPases associated with a variety of cellular activities
CG475_012045	SM00530	Helix-turn-helix XRE-family like proteins 
CG475_012090	SM00871	Bacterial transcription activator, effector binding domain
CG475_012115	SM01091	Transporter associated domain
CG475_012120	SM00422	helix_turn_helix, mercury resistance
CG475_012250	SM00382	ATPases associated with a variety of cellular activities
CG475_012285	SM00530	Helix-turn-helix XRE-family like proteins 
CG475_012405	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CG475_012405	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CG475_012425	SM00060	Fibronectin type 3 domain
CG475_012470	SM00530	Helix-turn-helix XRE-family like proteins 
CG475_012675	SM00497	Intron encoded nuclease repeat motif
CG475_012715	SM00530	Helix-turn-helix XRE-family like proteins 
CG475_012830	SM00357	Cold shock protein domain
CG475_012965	SM00434	DNA Topoisomerase IV
CG475_012970	SM00387	Histidine kinase-like ATPases
CG475_012970	SM00433	TopoisomeraseII
CG475_012980	SM00881	CoA binding domain
CG475_012985	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CG475_012990	SM00448	cheY-homologous receiver domain
CG475_012990	SM00862	Transcriptional regulatory protein, C terminal
CG475_013005	SM01207	CG475_013005
CG475_013025	SM00257	Lysin motif
CG475_013025	SM00636	CG475_013025
CG475_013045	SM00479	CG475_013045
CG475_013055	SM00530	Helix-turn-helix XRE-family like proteins 
CG475_013115	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
CG475_013150	SM00028	Tetratricopeptide repeats
CG475_013230	SM00729	Elongator protein 3, MiaB family, Radical SAM
CG475_013270	SM00644	CG475_013270
CG475_013270	SM00701	Animal peptidoglycan recognition proteins homologous to Bacteriophage T3 lysozyme.
CG475_013275	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
CG475_013290	SM00091	PAS domain
CG475_013290	SM00387	Histidine kinase-like ATPases
CG475_013290	SM00388	His Kinase A (phosphoacceptor) domain
CG475_013375	SM00346	helix_turn_helix isocitrate lyase regulation
CG475_013400	SM00644	CG475_013400
CG475_013415	SM00382	ATPases associated with a variety of cellular activities
CG475_013420	SM00382	ATPases associated with a variety of cellular activities
CG475_013435	SM00861	Transketolase, pyrimidine binding domain
CG475_013450	SM00382	ATPases associated with a variety of cellular activities
CG475_013455	SM00062	Bacterial periplasmic substrate-binding proteins
CG475_013470	SM00857	Resolvase, N terminal domain
CG475_013560	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CG475_013575	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CG475_013755	SM00530	Helix-turn-helix XRE-family like proteins 
CG475_013770	SM01230	CG475_013770
CG475_013775	SM00422	helix_turn_helix, mercury resistance
CG475_013795	SM00382	ATPases associated with a variety of cellular activities
CG475_013825	SM00287	Bacterial SH3 domain homologues
CG475_013840	SM00420	helix_turn_helix, Deoxyribose operon repressor
CG475_013840	SM01134	CG475_013840
CG475_013875	SM00411	bacterial (prokaryotic) histone like domain
CG475_013890	SM00382	ATPases associated with a variety of cellular activities
CG475_013970	SM00853	MutL C terminal dimerisation domain
CG475_013970	SM01340	CG475_013970
CG475_013975	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
CG475_013975	SM00534	ATPase domain of DNA mismatch repair MUTS family
CG475_013990	SM00729	Elongator protein 3, MiaB family, Radical SAM
CG475_014020	SM00322	K homology RNA-binding domain
CG475_014020	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CG475_014025	SM00382	ATPases associated with a variety of cellular activities
CG475_014030	SM00852	Probable molybdopterin binding domain
CG475_014080	SM00382	ATPases associated with a variety of cellular activities
CG475_014090	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CG475_014090	SM00866	CG475_014090
CG475_014095	SM00382	ATPases associated with a variety of cellular activities
CG475_014095	SM00843	CG475_014095
CG475_014135	SM00849	Metallo-beta-lactamase superfamily
CG475_014145	SM01130	CG475_014145
CG475_014155	SM00859	Semialdehyde dehydrogenase, NAD binding domain
CG475_014185	SM00316	Ribosomal protein S1-like RNA-binding domain
CG475_014185	SM00322	K homology RNA-binding domain
CG475_014190	SM01387	CG475_014190
CG475_014195	SM00904	Riboflavin kinase
CG475_014230	SM00316	Ribosomal protein S1-like RNA-binding domain
CG475_014230	SM00322	K homology RNA-binding domain
CG475_014240	SM00479	CG475_014240
CG475_014240	SM00481	DNA polymerase alpha chain like domain
CG475_014250	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CG475_014295	SM00382	ATPases associated with a variety of cellular activities
CG475_014295	SM01086	C-terminal, D2-small domain, of ClpB protein
CG475_014315	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
CG475_014315	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
CG475_014315	SM00493	CG475_014315
CG475_014325	SM00881	CoA binding domain
CG475_014375	SM00382	ATPases associated with a variety of cellular activities
CG475_014375	SM00962	SRP54-type protein, GTPase domain
CG475_014375	SM00963	SRP54-type protein, helical bundle domain
CG475_014385	SM00382	ATPases associated with a variety of cellular activities
CG475_014385	SM00962	SRP54-type protein, GTPase domain
CG475_014385	SM00963	SRP54-type protein, helical bundle domain
CG475_014390	SM00968	SMC proteins Flexible Hinge Domain
CG475_014395	SM00358	Double-stranded RNA binding motif
CG475_014395	SM00535	Ribonuclease III family
CG475_014405	SM00822	CG475_014405
CG475_014410	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CG475_014425	SM00487	DEAD-like helicases superfamily
CG475_014425	SM00490	helicase superfamily c-terminal domain
CG475_014430	SM01120	CG475_014430
CG475_014430	SM01121	CG475_014430
CG475_014450	SM00983	Thiamin pyrophosphokinase, vitamin B1 binding domain
CG475_014465	SM00220	Serine/Threonine protein kinases, catalytic domain
CG475_014465	SM00740	CG475_014465
CG475_014470	SM00331	Sigma factor PP2C-like phosphatases
CG475_014470	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
CG475_014495	SM00487	DEAD-like helicases superfamily
CG475_014495	SM00490	helicase superfamily c-terminal domain
CG475_014505	SM01409	CG475_014505
CG475_014510	SM00072	Guanylate kinase homologues.
CG475_014525	SM00831	Cation transporter/ATPase, N-terminus
CG475_014555	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
CG475_014570	SM00851	MGS-like domain
CG475_014570	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
CG475_014570	SM01209	CG475_014570
CG475_014575	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
CG475_014605	SM00363	S4 RNA-binding domain
CG475_014630	SM00363	S4 RNA-binding domain
CG475_014675	SM00864	Tubulin/FtsZ family, GTPase domain
CG475_014675	SM00865	Tubulin/FtsZ family, C-terminal domain
CG475_014680	SM00842	Cell division protein FtsA
CG475_014720	SM00740	CG475_014720
CG475_014725	SM00740	CG475_014725
CG475_014755	SM00717	SANT  SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
CG475_014790	SM00530	Helix-turn-helix XRE-family like proteins 
CG475_014800	SM00644	CG475_014800
CG475_014885	SM00507	HNH nucleases
CG475_015030	SM00530	Helix-turn-helix XRE-family like proteins 
CG475_015035	SM00530	Helix-turn-helix XRE-family like proteins 
CG475_015060	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CG475_015100	SM00855	Phosphoglycerate mutase family
CG475_015160	SM00878	Biotin carboxylase C-terminal domain
CG475_015185	SM00670	Large family of predicted nucleotide-binding domains
CG475_015210	SM00838	Elongation factor G C-terminus
CG475_015285	SM00861	Transketolase, pyrimidine binding domain
CG475_015320	SM00849	Metallo-beta-lactamase superfamily
CG475_015395	SM00052	Putative diguanylate phosphodiesterase
CG475_015440	SM00267	diguanylate cyclase
CG475_015480	SM00387	Histidine kinase-like ATPases
CG475_015480	SM00388	His Kinase A (phosphoacceptor) domain
CG475_015495	SM00354	helix_turn _helix lactose operon repressor
CG475_015520	SM00642	Alpha-amylase domain
CG475_015525	SM00642	Alpha-amylase domain
CG475_015530	SM00382	ATPases associated with a variety of cellular activities
CG475_015635	SM01007	Class II Aldolase and Adducin N-terminal domain
CG475_015665	SM00267	diguanylate cyclase
CG475_015700	SM01061	CAT RNA binding domain
CG475_015710	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CG475_015710	SM00866	CG475_015710
CG475_015725	SM00849	Metallo-beta-lactamase superfamily
CG475_015820	SM00387	Histidine kinase-like ATPases
CG475_015830	SM00936	Penicillin-binding protein 5, C-terminal domain 
CG475_015840	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CG475_015845	SM00382	ATPases associated with a variety of cellular activities
CG475_015870	SM00347	helix_turn_helix multiple antibiotic resistance protein
CG475_015890	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
CG475_015990	SM00354	helix_turn _helix lactose operon repressor
CG475_016010	SM00704	CDGSH-type zinc finger. Function unknown.
CG475_016040	SM00729	Elongator protein 3, MiaB family, Radical SAM
CG475_016040	SM00876	Biotin and Thiamin Synthesis associated domain
CG475_016090	SM00347	helix_turn_helix multiple antibiotic resistance protein
CG475_016115	SM00859	Semialdehyde dehydrogenase, NAD binding domain
CG475_016130	SM00849	Metallo-beta-lactamase superfamily
CG475_016155	SM00849	Metallo-beta-lactamase superfamily
CG475_016205	SM00382	ATPases associated with a variety of cellular activities
CG475_016215	SM00062	Bacterial periplasmic substrate-binding proteins
CG475_016215	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
CG475_016250	SM00861	Transketolase, pyrimidine binding domain
CG475_016270	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
CG475_016285	SM00091	PAS domain
CG475_016285	SM00382	ATPases associated with a variety of cellular activities
CG475_016305	SM00448	cheY-homologous receiver domain
CG475_016310	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CG475_016325	SM00363	S4 RNA-binding domain
CG475_016330	SM00861	Transketolase, pyrimidine binding domain
CG475_016365	SM00878	Biotin carboxylase C-terminal domain
CG475_016415	SM00382	ATPases associated with a variety of cellular activities
CG475_016435	SM00841	Elongation factor P, C-terminal
CG475_016435	SM01185	CG475_016435
CG475_016465	SM00529	Helix-turn-helix diphteria tox regulatory element
CG475_016480	SM00450	Rhodanese Homology Domain
CG475_016490	SM00354	helix_turn _helix lactose operon repressor
CG475_016530	SM00382	ATPases associated with a variety of cellular activities
CG475_016535	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CG475_016565	SM00487	DEAD-like helicases superfamily
CG475_016565	SM00490	helicase superfamily c-terminal domain
CG475_016805	SM00382	ATPases associated with a variety of cellular activities
CG475_016850	SM00530	Helix-turn-helix XRE-family like proteins 
CG475_016860	SM00857	Resolvase, N terminal domain
CG475_016900	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CG475_016915	SM01018	B12 binding domain
CG475_016940	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CG475_016950	SM00849	Metallo-beta-lactamase superfamily
CG475_016990	SM00382	ATPases associated with a variety of cellular activities
CG475_017055	SM00382	ATPases associated with a variety of cellular activities
CG475_017070	SM00518	AP endonuclease family 2
CG475_017075	SM00487	DEAD-like helicases superfamily
CG475_017075	SM00490	helicase superfamily c-terminal domain
CG475_017110	SM00400	zinc finger
CG475_017110	SM00493	CG475_017110
CG475_017110	SM00766	DNA primase DnaG DnaB-binding
CG475_017125	SM00116	Domain in cystathionine beta-synthase and other proteins.
CG475_017160	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CG475_017190	SM00729	Elongator protein 3, MiaB family, Radical SAM
CG475_017205	SM00271	DnaJ molecular chaperone homology domain
CG475_017225	SM00729	Elongator protein 3, MiaB family, Radical SAM
CG475_017240	SM00838	Elongation factor G C-terminus
CG475_017270	SM00849	Metallo-beta-lactamase superfamily
CG475_017280	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CG475_017300	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CG475_017310	SM01103	CG475_017310
CG475_017360	SM00954	Region found in RelA / SpoT proteins
CG475_017365	SM00098	Alkaline phosphatase homologues
CG475_017420	SM00530	Helix-turn-helix XRE-family like proteins 
CG475_017430	SM00354	helix_turn _helix lactose operon repressor
CG475_017515	SM00732	Likely ribonuclease with RNase H fold.
CG475_017525	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
CG475_017555	SM00028	Tetratricopeptide repeats
CG475_017555	SM00671	Sel1-like repeats.
CG475_017575	SM00382	ATPases associated with a variety of cellular activities
CG475_017595	SM00342	helix_turn_helix, arabinose operon control protein
CG475_017640	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CG475_017640	SM00954	Region found in RelA / SpoT proteins
CG475_017695	SM01323	CG475_017695
CG475_017715	SM00382	ATPases associated with a variety of cellular activities
CG475_017720	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CG475_017740	SM00257	Lysin motif
CG475_017790	SM00382	ATPases associated with a variety of cellular activities
CG475_017795	SM00387	Histidine kinase-like ATPases
CG475_017800	SM00448	cheY-homologous receiver domain
CG475_017800	SM00862	Transcriptional regulatory protein, C terminal
CG475_017810	SM01317	CG475_017810
CG475_017920	SM00257	Lysin motif
CG475_017930	SM01004	Delta-aminolevulinic acid dehydratase
CG475_017960	SM00382	ATPases associated with a variety of cellular activities
CG475_017960	SM00464	Found in ATP-dependent protease La (LON)
CG475_017965	SM00382	ATPases associated with a variety of cellular activities
CG475_017970	SM00382	ATPases associated with a variety of cellular activities
CG475_017970	SM00994	ClpX C4-type zinc finger
CG475_017970	SM01086	C-terminal, D2-small domain, of ClpB protein
CG475_017995	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CG475_018000	SM00822	CG475_018000
CG475_018000	SM00823	Phosphopantetheine attachment site
CG475_018000	SM00825	Beta-ketoacyl synthase
CG475_018000	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CG475_018000	SM01294	CG475_018000
CG475_018010	SM00822	CG475_018010
CG475_018100	SM00909	Sporulation and spore germination
CG475_018110	SM00421	helix_turn_helix, Lux Regulon
CG475_018130	SM00382	ATPases associated with a variety of cellular activities
CG475_018180	SM00465	GIY-YIG type nucleases (URI domain)
CG475_018195	SM00893	Electron transfer flavoprotein domain
CG475_018200	SM00893	Electron transfer flavoprotein domain
CG475_018245	SM00382	ATPases associated with a variety of cellular activities
CG475_018250	SM00387	Histidine kinase-like ATPases
CG475_018250	SM00388	His Kinase A (phosphoacceptor) domain
CG475_018255	SM00448	cheY-homologous receiver domain
CG475_018255	SM00862	Transcriptional regulatory protein, C terminal
CG475_018270	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
CG475_018280	SM00363	S4 RNA-binding domain
CG475_018290	SM00463	Small MutS-related domain
CG475_018290	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
CG475_018290	SM00534	ATPase domain of DNA mismatch repair MUTS family
CG475_018295	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CG475_018295	SM00481	DNA polymerase alpha chain like domain
CG475_018295	SM00483	DNA polymerase X family
CG475_018335	SM00873	B3/4 domain
CG475_018335	SM00874	tRNA synthetase B5 domain
CG475_018335	SM00896	Ferredoxin-fold anticodon binding domain
CG475_018345	SM00967	RNA 2'-O ribose methyltransferase substrate binding
CG475_018355	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CG475_018410	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
CG475_018445	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
CG475_018460	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
CG475_018460	SM01232	CG475_018460
CG475_018465	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
CG475_018465	SM00474	3'-5' exonuclease
CG475_018465	SM00475	5'-3' exonuclease
CG475_018465	SM00482	DNA polymerase A domain
CG475_018470	SM00091	PAS domain
CG475_018470	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CG475_018470	SM00387	Histidine kinase-like ATPases
CG475_018470	SM00388	His Kinase A (phosphoacceptor) domain
CG475_018475	SM00448	cheY-homologous receiver domain
CG475_018475	SM00862	Transcriptional regulatory protein, C terminal
CG475_018490	SM01329	CG475_018490
CG475_018535	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CG475_018540	SM00919	Malic enzyme, NAD binding domain
CG475_018540	SM01274	CG475_018540
CG475_018545	SM00481	DNA polymerase alpha chain like domain
CG475_018570	SM00116	Domain in cystathionine beta-synthase and other proteins.
CG475_018575	SM00849	Metallo-beta-lactamase superfamily
CG475_018600	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
CG475_018600	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
CG475_018705	SM00981	CG475_018705
CG475_018750	SM00363	S4 RNA-binding domain
CG475_018750	SM01390	CG475_018750
CG475_018765	SM00860	SMI1 / KNR4 family
CG475_018775	SM00363	S4 RNA-binding domain
CG475_018795	SM00116	Domain in cystathionine beta-synthase and other proteins.
CG475_018815	SM00354	helix_turn _helix lactose operon repressor
CG475_018825	SM00830	Chorismate mutase type II
CG475_018865	SM00382	ATPases associated with a variety of cellular activities
CG475_018865	SM00843	CG475_018865
CG475_018920	SM00849	Metallo-beta-lactamase superfamily
CG475_018940	SM00642	Alpha-amylase domain
CG475_018955	SM00420	helix_turn_helix, Deoxyribose operon repressor
CG475_018960	SM00363	S4 RNA-binding domain
CG475_018980	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CG475_019005	SM01058	CarD-like/TRCF domain
CG475_019035	SM00852	Probable molybdopterin binding domain
CG475_019050	SM00729	Elongator protein 3, MiaB family, Radical SAM
CG475_019055	SM00100	Cyclic nucleotide-monophosphate binding domain
CG475_019055	SM00419	helix_turn_helix, cAMP Regulatory protein
CG475_019060	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CG475_019090	SM00450	Rhodanese Homology Domain
CG475_019150	SM00382	ATPases associated with a variety of cellular activities
CG475_019170	SM00729	Elongator protein 3, MiaB family, Radical SAM
CG475_019180	SM00382	ATPases associated with a variety of cellular activities
CG475_019195	SM00871	Bacterial transcription activator, effector binding domain
CG475_019200	SM00420	helix_turn_helix, Deoxyribose operon repressor
CG475_019230	SM00852	Probable molybdopterin binding domain
CG475_019295	SM01276	CG475_019295
CG475_019330	SM00346	helix_turn_helix isocitrate lyase regulation
CG475_019335	SM00047	Lysozyme subfamily 2
CG475_019335	SM00644	CG475_019335
CG475_019340	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CG475_019365	SM00382	ATPases associated with a variety of cellular activities
CG475_019400	SM01234	CG475_019400
CG475_019405	SM00947	Carbonic anhydrase
CG475_019420	SM00894	Excalibur calcium-binding domain
CG475_019465	SM00899	CG475_019465
CG475_019490	SM00046	Diacylglycerol kinase catalytic domain (presumed)
CG475_019495	SM00382	ATPases associated with a variety of cellular activities
CG475_019505	SM00448	cheY-homologous receiver domain
CG475_019505	SM00862	Transcriptional regulatory protein, C terminal
CG475_019510	SM00387	Histidine kinase-like ATPases
CG475_019520	SM00382	ATPases associated with a variety of cellular activities
CG475_019540	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CG475_019580	SM00357	Cold shock protein domain
CG475_019620	SM00642	Alpha-amylase domain
CG475_019785	SM00316	Ribosomal protein S1-like RNA-binding domain
CG475_019795	SM00344	helix_turn_helix ASNC type
CG475_019825	SM01298	CG475_019825
CG475_019830	SM00479	CG475_019830
CG475_019975	SM00382	ATPases associated with a variety of cellular activities
CG475_019985	SM00850	LytTr DNA-binding domain
CG475_020035	SM00530	Helix-turn-helix XRE-family like proteins 
CG475_020105	SM00422	helix_turn_helix, mercury resistance
CG475_020125	SM00729	Elongator protein 3, MiaB family, Radical SAM
CG475_020185	SM00382	ATPases associated with a variety of cellular activities
CG475_020200	SM00382	ATPases associated with a variety of cellular activities
CG475_020200	SM00930	CG475_020200
CG475_020215	SM00493	CG475_020215
CG475_020320	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CG475_020320	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CG475_020380	SM00448	cheY-homologous receiver domain
CG475_020380	SM00862	Transcriptional regulatory protein, C terminal
CG475_020385	SM00387	Histidine kinase-like ATPases
CG475_020385	SM00388	His Kinase A (phosphoacceptor) domain
CG475_020390	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CG475_020390	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CG475_020395	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CG475_020395	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CG475_020415	SM00347	helix_turn_helix multiple antibiotic resistance protein
CG475_020465	SM00382	ATPases associated with a variety of cellular activities
CG475_020525	SM00317	SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain
CG475_020550	SM00342	helix_turn_helix, arabinose operon control protein
CG475_020600	SM00316	Ribosomal protein S1-like RNA-binding domain
CG475_020600	SM00357	Cold shock protein domain
CG475_020600	SM00955	CG475_020600
CG475_020625	SM01192	CG475_020625
CG475_020625	SM01193	CG475_020625
CG475_020645	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
CG475_020770	SM00028	Tetratricopeptide repeats
CG475_020810	SM00487	DEAD-like helicases superfamily
CG475_020810	SM00490	helicase superfamily c-terminal domain
CG475_020820	SM00422	helix_turn_helix, mercury resistance
CG475_020830	SM00530	Helix-turn-helix XRE-family like proteins 
CG475_020860	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CG475_020860	SM00245	tail specific protease
CG475_020870	SM00382	ATPases associated with a variety of cellular activities
CG475_020890	SM00957	SecA DEAD-like domain
CG475_020890	SM00958	SecA preprotein cross-linking domain
CG475_020905	SM00357	Cold shock protein domain
CG475_020915	SM00487	DEAD-like helicases superfamily
CG475_020915	SM00490	helicase superfamily c-terminal domain
CG475_020970	SM00382	ATPases associated with a variety of cellular activities
CG475_020975	SM00754	A domain in the BMP inhibitor chordin and in microbial proteins.
CG475_021065	SM00287	Bacterial SH3 domain homologues
CG475_021095	SM00287	Bacterial SH3 domain homologues
CG475_021115	SM00487	DEAD-like helicases superfamily
CG475_021115	SM00490	helicase superfamily c-terminal domain
CG475_021160	SM00382	ATPases associated with a variety of cellular activities
CG475_021175	SM00646	CG475_021175
CG475_021195	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CG475_021195	SM00387	Histidine kinase-like ATPases
CG475_021195	SM00388	His Kinase A (phosphoacceptor) domain
CG475_021200	SM00448	cheY-homologous receiver domain
CG475_021200	SM00862	Transcriptional regulatory protein, C terminal
CG475_021225	SM00382	ATPases associated with a variety of cellular activities
CG475_021285	SM00382	ATPases associated with a variety of cellular activities
CG475_021290	SM00850	LytTr DNA-binding domain
CG475_021370	SM00052	Putative diguanylate phosphodiesterase
CG475_021370	SM00091	PAS domain
CG475_021370	SM00267	diguanylate cyclase
CG475_021375	SM00052	Putative diguanylate phosphodiesterase
CG475_021375	SM00091	PAS domain
CG475_021375	SM00267	diguanylate cyclase
CG475_021395	SM00382	ATPases associated with a variety of cellular activities
CG475_021470	SM00226	Low molecular weight phosphatase family
CG475_021495	SM00903	Flavin reductase like domain
CG475_021530	SM00937	CG475_021530
CG475_021545	SM00357	Cold shock protein domain
CG475_021545	SM00382	ATPases associated with a variety of cellular activities
CG475_021545	SM00959	Rho termination factor, N-terminal domain
CG475_021565	SM00448	cheY-homologous receiver domain
CG475_021615	SM00155	Phospholipase D. Active site motifs.
CG475_021625	SM00530	Helix-turn-helix XRE-family like proteins 
CG475_021630	SM00421	helix_turn_helix, Lux Regulon
CG475_021630	SM00448	cheY-homologous receiver domain
CG475_021645	SM00382	ATPases associated with a variety of cellular activities
CG475_021665	SM00836	DALR anticodon binding domain
CG475_021665	SM01016	Arginyl tRNA synthetase N terminal dom
CG475_021705	SM00422	helix_turn_helix, mercury resistance
CG475_021735	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CG475_021745	SM00382	ATPases associated with a variety of cellular activities
CG475_021785	SM00936	Penicillin-binding protein 5, C-terminal domain 
CG475_021830	SM00986	Uracil DNA glycosylase superfamily
CG475_021830	SM00987	UreE urease accessory protein, C-terminal domain 
CG475_021840	SM00382	ATPases associated with a variety of cellular activities
CG475_021885	SM00448	cheY-homologous receiver domain
CG475_021885	SM00850	LytTr DNA-binding domain
CG475_021920	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CG475_021975	SM00382	ATPases associated with a variety of cellular activities
CG475_022010	SM00448	cheY-homologous receiver domain
CG475_022010	SM00850	LytTr DNA-binding domain
CG475_022015	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CG475_022015	SM00387	Histidine kinase-like ATPases
CG475_022070	SM01240	CG475_022070
CG475_022115	SM00382	ATPases associated with a variety of cellular activities
CG475_022135	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CG475_022140	SM00849	Metallo-beta-lactamase superfamily
CG475_022155	SM00091	PAS domain
CG475_022155	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CG475_022155	SM00387	Histidine kinase-like ATPases
CG475_022155	SM00388	His Kinase A (phosphoacceptor) domain
CG475_022160	SM00448	cheY-homologous receiver domain
CG475_022160	SM00862	Transcriptional regulatory protein, C terminal
CG475_022185	SM00788	Adenylosuccinate synthetase
CG475_022200	SM00267	diguanylate cyclase
CG475_022245	SM00470	ParB-like nuclease domain
CG475_022255	SM00470	ParB-like nuclease domain
CG475_022265	SM01228	CG475_022265
CG475_022275	SM00393	Putative single-stranded nucleic acids-binding domain
CG475_022275	SM01245	CG475_022275
CG475_022365	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
CG475_022365	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
CG475_022365	SM00493	CG475_022365
CG475_022405	SM00704	CDGSH-type zinc finger. Function unknown.
CG475_022685	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CG475_022700	SM00028	Tetratricopeptide repeats
CG475_022740	SM00857	Resolvase, N terminal domain
