CG478_000005	SM00382	ATPases associated with a variety of cellular activities
CG478_000005	SM00760	Bacterial dnaA protein helix-turn-helix domain
CG478_000010	SM00480	DNA polymerase III beta subunit
CG478_000025	SM00387	Histidine kinase-like ATPases
CG478_000025	SM00433	TopoisomeraseII
CG478_000030	SM00434	DNA Topoisomerase IV
CG478_000065	SM00116	Domain in cystathionine beta-synthase and other proteins.
CG478_000065	SM01240	CG478_000065
CG478_000070	SM00936	Penicillin-binding protein 5, C-terminal domain 
CG478_000125	SM00382	ATPases associated with a variety of cellular activities
CG478_000135	SM00493	CG478_000135
CG478_000220	SM00966	SpoVT / AbrB like domain 
CG478_000235	SM00493	CG478_000235
CG478_000240	SM00650	Ribosomal RNA adenine dimethylases
CG478_000285	SM01400	CG478_000285
CG478_000300	SM00487	DEAD-like helicases superfamily
CG478_000300	SM00490	helicase superfamily c-terminal domain
CG478_000300	SM00982	CG478_000300
CG478_000300	SM01058	CarD-like/TRCF domain
CG478_000305	SM00966	SpoVT / AbrB like domain 
CG478_000320	SM00363	S4 RNA-binding domain
CG478_000340	SM00316	Ribosomal protein S1-like RNA-binding domain
CG478_000355	SM00331	Sigma factor PP2C-like phosphatases
CG478_000355	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
CG478_000360	SM00977	TilS substrate C-terminal domain
CG478_000370	SM00382	ATPases associated with a variety of cellular activities
CG478_000410	SM00905	Dihydroneopterin aldolase
CG478_000420	SM00530	Helix-turn-helix XRE-family like proteins 
CG478_000525	SM00382	ATPases associated with a variety of cellular activities
CG478_000525	SM01086	C-terminal, D2-small domain, of ClpB protein
CG478_000530	SM00382	ATPases associated with a variety of cellular activities
CG478_000540	SM00670	Large family of predicted nucleotide-binding domains
CG478_000565	SM00840	CG478_000565
CG478_000570	SM00535	Ribonuclease III family
CG478_000575	SM00967	RNA 2'-O ribose methyltransferase substrate binding
CG478_000585	SM00421	helix_turn_helix, Lux Regulon
CG478_000600	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
CG478_000605	SM00649	Ribosomal protein L11/L12
CG478_000635	SM00663	RNA polymerase I subunit A N-terminus
CG478_000655	SM00838	Elongation factor G C-terminus
CG478_000655	SM00889	Elongation factor G, domain IV
CG478_000665	SM01403	CG478_000665
CG478_000685	SM01382	CG478_000685
CG478_000685	SM01383	CG478_000685
CG478_000700	SM00322	K homology RNA-binding domain
CG478_000720	SM01374	CG478_000720
CG478_000725	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
CG478_000785	SM00316	Ribosomal protein S1-like RNA-binding domain
CG478_000805	SM00662	RNA polymerases D
CG478_000815	SM00382	ATPases associated with a variety of cellular activities
CG478_000820	SM00382	ATPases associated with a variety of cellular activities
CG478_000850	SM00646	CG478_000850
CG478_000865	SM01251	CG478_000865
CG478_000920	SM00530	Helix-turn-helix XRE-family like proteins 
CG478_001090	SM00382	ATPases associated with a variety of cellular activities
CG478_001105	SM00530	Helix-turn-helix XRE-family like proteins 
CG478_001110	SM00729	Elongator protein 3, MiaB family, Radical SAM
CG478_001270	SM00382	ATPases associated with a variety of cellular activities
CG478_001275	SM00382	ATPases associated with a variety of cellular activities
CG478_001290	SM00342	helix_turn_helix, arabinose operon control protein
CG478_001340	SM00563	Phosphate acyltransferases
CG478_001400	SM00387	Histidine kinase-like ATPases
CG478_001405	SM00421	helix_turn_helix, Lux Regulon
CG478_001405	SM00448	cheY-homologous receiver domain
CG478_001410	SM00382	ATPases associated with a variety of cellular activities
CG478_001445	SM00382	ATPases associated with a variety of cellular activities
CG478_001450	SM00382	ATPases associated with a variety of cellular activities
CG478_001505	SM00487	DEAD-like helicases superfamily
CG478_001505	SM00490	helicase superfamily c-terminal domain
CG478_001525	SM01005	Alanine racemase, C-terminal domain
CG478_001540	SM00316	Ribosomal protein S1-like RNA-binding domain
CG478_001540	SM00732	Likely ribonuclease with RNase H fold.
CG478_001550	SM00731	SprT homologues.
CG478_001660	SM00382	ATPases associated with a variety of cellular activities
CG478_001665	SM00881	CoA binding domain
CG478_001680	SM00883	Chaperonin 10 Kd subunit
CG478_001700	SM00448	cheY-homologous receiver domain
CG478_001700	SM00862	Transcriptional regulatory protein, C terminal
CG478_001705	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CG478_001705	SM00387	Histidine kinase-like ATPases
CG478_001705	SM00388	His Kinase A (phosphoacceptor) domain
CG478_001755	SM01022	CG478_001755
CG478_001770	SM00382	ATPases associated with a variety of cellular activities
CG478_001775	SM00387	Histidine kinase-like ATPases
CG478_001775	SM00388	His Kinase A (phosphoacceptor) domain
CG478_001780	SM00448	cheY-homologous receiver domain
CG478_001780	SM00862	Transcriptional regulatory protein, C terminal
CG478_001825	SM01001	AIR carboxylase
CG478_001835	SM00998	Adenylosuccinate lyase C-terminus
CG478_001850	SM01211	CG478_001850
CG478_001875	SM00798	AICARFT/IMPCHase bienzyme
CG478_001875	SM00851	MGS-like domain
CG478_001880	SM01209	CG478_001880
CG478_001880	SM01210	CG478_001880
CG478_001900	SM00244	prohibitin homologues
CG478_001920	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CG478_001920	SM00292	breast cancer carboxy-terminal domain
CG478_001920	SM00532	Ligase N family
CG478_001945	SM00382	ATPases associated with a variety of cellular activities
CG478_001945	SM00930	CG478_001945
CG478_001985	SM00845	GatB domain
CG478_001990	SM00046	Diacylglycerol kinase catalytic domain (presumed)
CG478_002010	SM00382	ATPases associated with a variety of cellular activities
CG478_002110	SM00382	ATPases associated with a variety of cellular activities
CG478_002160	SM00387	Histidine kinase-like ATPases
CG478_002160	SM00388	His Kinase A (phosphoacceptor) domain
CG478_002210	SM00062	Bacterial periplasmic substrate-binding proteins
CG478_002210	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
CG478_002215	SM00382	ATPases associated with a variety of cellular activities
CG478_002220	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CG478_002220	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CG478_002235	SM01207	CG478_002235
CG478_002250	SM00448	cheY-homologous receiver domain
CG478_002250	SM00862	Transcriptional regulatory protein, C terminal
CG478_002255	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CG478_002260	SM00881	CoA binding domain
CG478_002270	SM00387	Histidine kinase-like ATPases
CG478_002270	SM00433	TopoisomeraseII
CG478_002275	SM00434	DNA Topoisomerase IV
CG478_002410	SM00357	Cold shock protein domain
CG478_002525	SM00530	Helix-turn-helix XRE-family like proteins 
CG478_002565	SM00497	Intron encoded nuclease repeat motif
CG478_002770	SM00530	Helix-turn-helix XRE-family like proteins 
CG478_002815	SM00060	Fibronectin type 3 domain
CG478_002835	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
CG478_002835	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CG478_002880	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
CG478_002880	SM00534	ATPase domain of DNA mismatch repair MUTS family
CG478_002955	SM00530	Helix-turn-helix XRE-family like proteins 
CG478_002990	SM00382	ATPases associated with a variety of cellular activities
CG478_003120	SM00422	helix_turn_helix, mercury resistance
CG478_003125	SM01091	Transporter associated domain
CG478_003150	SM00871	Bacterial transcription activator, effector binding domain
CG478_003195	SM00530	Helix-turn-helix XRE-family like proteins 
CG478_003210	SM00382	ATPases associated with a variety of cellular activities
CG478_003250	SM00382	ATPases associated with a variety of cellular activities
CG478_003300	SM00347	helix_turn_helix multiple antibiotic resistance protein
CG478_003365	SM00857	Resolvase, N terminal domain
CG478_003505	SM00984	UDP binding domain
CG478_003565	SM00346	helix_turn_helix isocitrate lyase regulation
CG478_003570	SM00796	Allophanate hydrolase subunit 1
CG478_003575	SM00797	Allophanate hydrolase subunit 2
CG478_003610	SM00014	Acid phosphatase homologues
CG478_003655	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CG478_003760	SM00487	DEAD-like helicases superfamily
CG478_003810	SM00830	Chorismate mutase type II
CG478_003815	SM00382	ATPases associated with a variety of cellular activities
CG478_003875	SM00382	ATPases associated with a variety of cellular activities
CG478_003880	SM00062	Bacterial periplasmic substrate-binding proteins
CG478_003930	SM00849	Metallo-beta-lactamase superfamily
CG478_004115	SM00860	SMI1 / KNR4 family
CG478_004165	SM00344	helix_turn_helix ASNC type
CG478_004240	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CG478_004280	SM00829	Enoylreductase
CG478_004285	SM00347	helix_turn_helix multiple antibiotic resistance protein
CG478_004300	SM01131	CG478_004300
CG478_004310	SM00028	Tetratricopeptide repeats
CG478_004325	SM00341	Helicase and RNase D C-terminal
CG478_004325	SM00487	DEAD-like helicases superfamily
CG478_004325	SM00490	helicase superfamily c-terminal domain
CG478_004325	SM00956	CG478_004325
CG478_004385	SM00116	Domain in cystathionine beta-synthase and other proteins.
CG478_004385	SM00382	ATPases associated with a variety of cellular activities
CG478_004395	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CG478_004510	SM00028	Tetratricopeptide repeats
CG478_004570	SM00091	PAS domain
CG478_004570	SM00387	Histidine kinase-like ATPases
CG478_004570	SM00388	His Kinase A (phosphoacceptor) domain
CG478_004630	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CG478_004740	SM00855	Phosphoglycerate mutase family
CG478_004780	SM00465	GIY-YIG type nucleases (URI domain)
CG478_004825	SM00257	Lysin motif
CG478_004830	SM00966	SpoVT / AbrB like domain 
CG478_004920	SM00422	helix_turn_helix, mercury resistance
CG478_004920	SM00871	Bacterial transcription activator, effector binding domain
CG478_004945	SM00448	cheY-homologous receiver domain
CG478_004945	SM00862	Transcriptional regulatory protein, C terminal
CG478_004950	SM00387	Histidine kinase-like ATPases
CG478_004950	SM00388	His Kinase A (phosphoacceptor) domain
CG478_004965	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CG478_005005	SM00878	Biotin carboxylase C-terminal domain
CG478_005050	SM00855	Phosphoglycerate mutase family
CG478_005055	SM00347	helix_turn_helix multiple antibiotic resistance protein
CG478_005060	SM00487	DEAD-like helicases superfamily
CG478_005060	SM00490	helicase superfamily c-terminal domain
CG478_005115	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CG478_005120	SM00382	ATPases associated with a variety of cellular activities
CG478_005125	SM00382	ATPases associated with a variety of cellular activities
CG478_005145	SM00357	Cold shock protein domain
CG478_005200	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
CG478_005220	SM00411	bacterial (prokaryotic) histone like domain
CG478_005240	SM00923	MbtH-like protein
CG478_005245	SM00823	Phosphopantetheine attachment site
CG478_005245	SM00824	Thioesterase
CG478_005315	SM00530	Helix-turn-helix XRE-family like proteins 
CG478_005330	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CG478_005360	SM00382	ATPases associated with a variety of cellular activities
CG478_005380	SM00382	ATPases associated with a variety of cellular activities
CG478_005400	SM00823	Phosphopantetheine attachment site
CG478_005535	SM00014	Acid phosphatase homologues
CG478_005620	SM00014	Acid phosphatase homologues
CG478_005625	SM00219	Tyrosine kinase, catalytic domain
CG478_005670	SM00382	ATPases associated with a variety of cellular activities
CG478_005685	SM00882	Coenzyme A transferase
CG478_005690	SM00882	Coenzyme A transferase
CG478_005710	SM00387	Histidine kinase-like ATPases
CG478_005710	SM00388	His Kinase A (phosphoacceptor) domain
CG478_005720	SM00116	Domain in cystathionine beta-synthase and other proteins.
CG478_005720	SM01091	Transporter associated domain
CG478_005785	SM01350	CG478_005785
CG478_005890	SM00563	Phosphate acyltransferases
CG478_005935	SM00382	ATPases associated with a variety of cellular activities
CG478_006020	SM00836	DALR anticodon binding domain
CG478_006020	SM01016	Arginyl tRNA synthetase N terminal dom
CG478_006040	SM00567	E-Z type HEAT repeats
CG478_006040	SM00932	Scaffold protein Nfu/NifU N terminal
CG478_006055	SM00382	ATPases associated with a variety of cellular activities
CG478_006060	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CG478_006070	SM00646	CG478_006070
CG478_006075	SM00829	Enoylreductase
CG478_006105	SM00226	Low molecular weight phosphatase family
CG478_006115	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CG478_006160	SM00487	DEAD-like helicases superfamily
CG478_006160	SM00490	helicase superfamily c-terminal domain
CG478_006305	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CG478_006320	SM01005	Alanine racemase, C-terminal domain
CG478_006345	SM00347	helix_turn_helix multiple antibiotic resistance protein
CG478_006355	SM00244	prohibitin homologues
CG478_006415	SM01091	Transporter associated domain
CG478_006440	SM00155	Phospholipase D. Active site motifs.
CG478_006540	SM00833	Cobalamin synthesis protein cobW C-terminal domain
CG478_006580	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CG478_006580	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CG478_006580	SM00319	Homologues of the ligand binding domain of Tar
CG478_006615	SM00460	Transglutaminase/protease-like homologues
CG478_006695	SM00287	Bacterial SH3 domain homologues
CG478_006735	SM00833	Cobalamin synthesis protein cobW C-terminal domain
CG478_006765	SM00342	helix_turn_helix, arabinose operon control protein
CG478_006795	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
CG478_006795	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
CG478_006795	SM00493	CG478_006795
CG478_006810	SM01133	CG478_006810
CG478_006835	SM00450	Rhodanese Homology Domain
CG478_006980	SM00382	ATPases associated with a variety of cellular activities
CG478_007000	SM00047	Lysozyme subfamily 2
CG478_007040	SM00487	DEAD-like helicases superfamily
CG478_007040	SM00490	helicase superfamily c-terminal domain
CG478_007115	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CG478_007115	SM00895	CG478_007115
CG478_007145	SM00347	helix_turn_helix multiple antibiotic resistance protein
CG478_007230	SM00382	ATPases associated with a variety of cellular activities
CG478_007240	SM00382	ATPases associated with a variety of cellular activities
CG478_007240	SM00962	SRP54-type protein, GTPase domain
CG478_007310	SM00260	Two component signalling adaptor domain
CG478_007310	SM00448	cheY-homologous receiver domain
CG478_007345	SM00382	ATPases associated with a variety of cellular activities
CG478_007420	SM00138	Methyltransferase, chemotaxis proteins 
CG478_007440	SM00073	Histidine Phosphotransfer domain
CG478_007440	SM00260	Two component signalling adaptor domain
CG478_007440	SM00387	Histidine kinase-like ATPases
CG478_007440	SM01231	CG478_007440
CG478_007445	SM00448	cheY-homologous receiver domain
CG478_007510	SM00849	Metallo-beta-lactamase superfamily
CG478_007540	SM00357	Cold shock protein domain
CG478_007595	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
CG478_007595	SM00475	5'-3' exonuclease
CG478_007635	SM00450	Rhodanese Homology Domain
CG478_007680	SM00491	CG478_007680
CG478_007690	SM00981	CG478_007690
CG478_007745	SM00060	Fibronectin type 3 domain
CG478_007755	SM00478	endonuclease III
CG478_007755	SM00525	CG478_007755
CG478_007780	SM00479	CG478_007780
CG478_007780	SM00487	DEAD-like helicases superfamily
CG478_007780	SM00488	CG478_007780
CG478_007780	SM00491	CG478_007780
CG478_007825	SM00851	MGS-like domain
CG478_007845	SM00986	Uracil DNA glycosylase superfamily
CG478_007845	SM00987	UreE urease accessory protein, C-terminal domain 
CG478_007890	SM00914	CG478_007890
CG478_007895	SM00028	Tetratricopeptide repeats
CG478_007920	SM00562	CG478_007920
CG478_007945	SM00411	bacterial (prokaryotic) histone like domain
CG478_008005	SM00316	Ribosomal protein S1-like RNA-binding domain
CG478_008020	SM00870	CG478_008020
CG478_008030	SM00644	CG478_008030
CG478_008040	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
CG478_008050	SM00422	helix_turn_helix, mercury resistance
CG478_008060	SM00257	Lysin motif
CG478_008070	SM00487	DEAD-like helicases superfamily
CG478_008070	SM00490	helicase superfamily c-terminal domain
CG478_008095	SM00257	Lysin motif
CG478_008105	SM00091	PAS domain
CG478_008105	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CG478_008105	SM00387	Histidine kinase-like ATPases
CG478_008105	SM00388	His Kinase A (phosphoacceptor) domain
CG478_008110	SM00448	cheY-homologous receiver domain
CG478_008110	SM00862	Transcriptional regulatory protein, C terminal
CG478_008130	SM00363	S4 RNA-binding domain
CG478_008180	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CG478_008180	SM00387	Histidine kinase-like ATPases
CG478_008180	SM00388	His Kinase A (phosphoacceptor) domain
CG478_008200	SM00387	Histidine kinase-like ATPases
CG478_008200	SM00388	His Kinase A (phosphoacceptor) domain
CG478_008275	SM00855	Phosphoglycerate mutase family
CG478_008290	SM01061	CAT RNA binding domain
CG478_008330	SM00421	helix_turn_helix, Lux Regulon
CG478_008330	SM00448	cheY-homologous receiver domain
CG478_008335	SM00387	Histidine kinase-like ATPases
CG478_008510	SM01329	CG478_008510
CG478_008515	SM00917	LeuA allosteric (dimerisation) domain
CG478_008585	SM00347	helix_turn_helix multiple antibiotic resistance protein
CG478_008725	SM00344	helix_turn_helix ASNC type
CG478_008745	SM00382	ATPases associated with a variety of cellular activities
CG478_008755	SM00382	ATPases associated with a variety of cellular activities
CG478_008760	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CG478_008850	SM00347	helix_turn_helix multiple antibiotic resistance protein
CG478_008855	SM00387	Histidine kinase-like ATPases
CG478_008855	SM00388	His Kinase A (phosphoacceptor) domain
CG478_008875	SM01007	Class II Aldolase and Adducin N-terminal domain
CG478_008880	SM00420	helix_turn_helix, Deoxyribose operon repressor
CG478_008880	SM01134	CG478_008880
CG478_008900	SM00382	ATPases associated with a variety of cellular activities
CG478_008930	SM00822	CG478_008930
CG478_009040	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CG478_009040	SM00895	CG478_009040
CG478_009045	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CG478_009045	SM00387	Histidine kinase-like ATPases
CG478_009045	SM00388	His Kinase A (phosphoacceptor) domain
CG478_009050	SM00448	cheY-homologous receiver domain
CG478_009050	SM00862	Transcriptional regulatory protein, C terminal
CG478_009100	SM00014	Acid phosphatase homologues
CG478_009120	SM00382	ATPases associated with a variety of cellular activities
CG478_009140	SM00530	Helix-turn-helix XRE-family like proteins 
CG478_009245	SM00028	Tetratricopeptide repeats
CG478_009390	SM01130	CG478_009390
CG478_009405	SM00861	Transketolase, pyrimidine binding domain
CG478_009475	SM00635	Bacterial Ig-like domain 2
CG478_009645	SM00954	Region found in RelA / SpoT proteins
CG478_009655	SM01118	CG478_009655
CG478_009685	SM00155	Phospholipase D. Active site motifs.
CG478_009730	SM00382	ATPases associated with a variety of cellular activities
CG478_009735	SM00382	ATPases associated with a variety of cellular activities
CG478_009780	SM00825	Beta-ketoacyl synthase
CG478_009810	SM00382	ATPases associated with a variety of cellular activities
CG478_009810	SM01086	C-terminal, D2-small domain, of ClpB protein
CG478_009855	SM00316	Ribosomal protein S1-like RNA-binding domain
CG478_009865	SM00642	Alpha-amylase domain
CG478_009875	SM01060	CG478_009875
CG478_009975	SM00357	Cold shock protein domain
CG478_010005	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CG478_010005	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CG478_010030	SM00448	cheY-homologous receiver domain
CG478_010030	SM00862	Transcriptional regulatory protein, C terminal
CG478_010035	SM00387	Histidine kinase-like ATPases
CG478_010035	SM00388	His Kinase A (phosphoacceptor) domain
CG478_010065	SM00849	Metallo-beta-lactamase superfamily
CG478_010075	SM00354	helix_turn _helix lactose operon repressor
CG478_010180	SM00382	ATPases associated with a variety of cellular activities
CG478_010200	SM00347	helix_turn_helix multiple antibiotic resistance protein
CG478_010260	SM00448	cheY-homologous receiver domain
CG478_010260	SM00862	Transcriptional regulatory protein, C terminal
CG478_010265	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CG478_010265	SM00387	Histidine kinase-like ATPases
CG478_010265	SM00388	His Kinase A (phosphoacceptor) domain
CG478_010270	SM00382	ATPases associated with a variety of cellular activities
CG478_010290	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CG478_010335	SM01120	CG478_010335
CG478_010355	SM01061	CAT RNA binding domain
CG478_010430	SM00829	Enoylreductase
CG478_010450	SM01329	CG478_010450
CG478_010465	SM00382	ATPases associated with a variety of cellular activities
CG478_010475	SM00487	DEAD-like helicases superfamily
CG478_010475	SM00490	helicase superfamily c-terminal domain
CG478_010485	SM00487	DEAD-like helicases superfamily
CG478_010485	SM00490	helicase superfamily c-terminal domain
CG478_010530	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CG478_010535	SM00382	ATPases associated with a variety of cellular activities
CG478_010580	SM00530	Helix-turn-helix XRE-family like proteins 
CG478_010595	SM00530	Helix-turn-helix XRE-family like proteins 
CG478_010610	SM00860	SMI1 / KNR4 family
CG478_010720	SM00646	CG478_010720
CG478_010725	SM00646	CG478_010725
CG478_010780	SM00635	Bacterial Ig-like domain 2
CG478_010795	SM00957	SecA DEAD-like domain
CG478_010795	SM00958	SecA preprotein cross-linking domain
CG478_010820	SM00729	Elongator protein 3, MiaB family, Radical SAM
CG478_010895	SM00421	helix_turn_helix, Lux Regulon
CG478_010895	SM00448	cheY-homologous receiver domain
CG478_010930	SM00382	ATPases associated with a variety of cellular activities
CG478_010940	SM00062	Bacterial periplasmic substrate-binding proteins
CG478_010940	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
CG478_010950	SM00382	ATPases associated with a variety of cellular activities
CG478_010955	SM00382	ATPases associated with a variety of cellular activities
CG478_010985	SM00344	helix_turn_helix ASNC type
CG478_011120	SM00382	ATPases associated with a variety of cellular activities
CG478_011240	SM00347	helix_turn_helix multiple antibiotic resistance protein
CG478_011270	SM00857	Resolvase, N terminal domain
CG478_011375	SM00382	ATPases associated with a variety of cellular activities
CG478_011390	SM00287	Bacterial SH3 domain homologues
CG478_011405	SM00116	Domain in cystathionine beta-synthase and other proteins.
CG478_011550	SM00899	CG478_011550
CG478_011685	SM00530	Helix-turn-helix XRE-family like proteins 
CG478_011695	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CG478_011725	SM00770	Zinc dependent phospholipase C (alpha toxin)
CG478_011775	SM00382	ATPases associated with a variety of cellular activities
CG478_011790	SM00354	helix_turn _helix lactose operon repressor
CG478_011800	SM00347	helix_turn_helix multiple antibiotic resistance protein
CG478_011810	SM00382	ATPases associated with a variety of cellular activities
CG478_011815	SM00382	ATPases associated with a variety of cellular activities
CG478_011855	SM00448	cheY-homologous receiver domain
CG478_011855	SM00862	Transcriptional regulatory protein, C terminal
CG478_011860	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CG478_011860	SM00387	Histidine kinase-like ATPases
CG478_011860	SM00388	His Kinase A (phosphoacceptor) domain
CG478_011885	SM00062	Bacterial periplasmic substrate-binding proteins
CG478_011885	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
CG478_011890	SM00382	ATPases associated with a variety of cellular activities
CG478_011915	SM00382	ATPases associated with a variety of cellular activities
CG478_011920	SM00327	von Willebrand factor (vWF) type A domain
CG478_011955	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CG478_011975	SM01091	Transporter associated domain
CG478_012030	SM00028	Tetratricopeptide repeats
CG478_012030	SM00530	Helix-turn-helix XRE-family like proteins 
CG478_012045	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CG478_012065	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
CG478_012065	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
CG478_012070	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CG478_012070	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CG478_012085	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CG478_012085	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
CG478_012100	SM00448	cheY-homologous receiver domain
CG478_012100	SM00862	Transcriptional regulatory protein, C terminal
CG478_012105	SM00387	Histidine kinase-like ATPases
CG478_012105	SM00388	His Kinase A (phosphoacceptor) domain
CG478_012120	SM00919	Malic enzyme, NAD binding domain
CG478_012120	SM01274	CG478_012120
CG478_012130	SM00448	cheY-homologous receiver domain
CG478_012135	SM00091	PAS domain
CG478_012135	SM00387	Histidine kinase-like ATPases
CG478_012140	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CG478_012140	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CG478_012140	SM00319	Homologues of the ligand binding domain of Tar
CG478_012150	SM00248	ankyrin repeats
CG478_012170	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CG478_012170	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CG478_012175	SM00244	prohibitin homologues
CG478_012185	SM00089	Repeats in polycystic kidney disease 1 (PKD1) and other proteins
CG478_012195	SM00460	Transglutaminase/protease-like homologues
CG478_012205	SM00530	Helix-turn-helix XRE-family like proteins 
CG478_012210	SM00857	Resolvase, N terminal domain
CG478_012220	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
CG478_012255	SM00763	PrkA AAA domain
CG478_012275	SM00567	E-Z type HEAT repeats
CG478_012300	SM00028	Tetratricopeptide repeats
CG478_012315	SM00860	SMI1 / KNR4 family
CG478_012445	SM00382	ATPases associated with a variety of cellular activities
CG478_012465	SM00382	ATPases associated with a variety of cellular activities
CG478_012495	SM00478	endonuclease III
CG478_012495	SM00525	CG478_012495
CG478_012565	SM00984	UDP binding domain
CG478_012600	SM00530	Helix-turn-helix XRE-family like proteins 
CG478_012610	SM00857	Resolvase, N terminal domain
CG478_012660	SM00478	endonuclease III
CG478_012745	SM00226	Low molecular weight phosphatase family
CG478_012795	SM00946	Prolyl-tRNA synthetase, C-terminal
CG478_012895	SM00060	Fibronectin type 3 domain
CG478_012895	SM00636	CG478_012895
CG478_012895	SM00637	CG478_012895
CG478_012900	SM00382	ATPases associated with a variety of cellular activities
CG478_012925	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CG478_012925	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CG478_012950	SM00382	ATPases associated with a variety of cellular activities
CG478_012965	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
CG478_012965	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
CG478_012965	SM00493	CG478_012965
CG478_012985	SM00642	Alpha-amylase domain
CG478_012995	SM00100	Cyclic nucleotide-monophosphate binding domain
CG478_012995	SM00419	helix_turn_helix, cAMP Regulatory protein
CG478_013035	SM00257	Lysin motif
CG478_013035	SM00636	CG478_013035
CG478_013055	SM00479	CG478_013055
CG478_013065	SM00530	Helix-turn-helix XRE-family like proteins 
CG478_013125	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
CG478_013160	SM00028	Tetratricopeptide repeats
CG478_013240	SM00729	Elongator protein 3, MiaB family, Radical SAM
CG478_013280	SM00644	CG478_013280
CG478_013280	SM00701	Animal peptidoglycan recognition proteins homologous to Bacteriophage T3 lysozyme.
CG478_013285	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
CG478_013300	SM00091	PAS domain
CG478_013300	SM00387	Histidine kinase-like ATPases
CG478_013300	SM00388	His Kinase A (phosphoacceptor) domain
CG478_013385	SM00346	helix_turn_helix isocitrate lyase regulation
CG478_013410	SM00644	CG478_013410
CG478_013425	SM00382	ATPases associated with a variety of cellular activities
CG478_013430	SM00382	ATPases associated with a variety of cellular activities
CG478_013445	SM00861	Transketolase, pyrimidine binding domain
CG478_013460	SM00382	ATPases associated with a variety of cellular activities
CG478_013465	SM00062	Bacterial periplasmic substrate-binding proteins
CG478_013480	SM00857	Resolvase, N terminal domain
CG478_013570	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CG478_013585	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CG478_013765	SM00530	Helix-turn-helix XRE-family like proteins 
CG478_013780	SM01230	CG478_013780
CG478_013785	SM00422	helix_turn_helix, mercury resistance
CG478_013805	SM00382	ATPases associated with a variety of cellular activities
CG478_013835	SM00287	Bacterial SH3 domain homologues
CG478_013850	SM00420	helix_turn_helix, Deoxyribose operon repressor
CG478_013850	SM01134	CG478_013850
CG478_013885	SM00411	bacterial (prokaryotic) histone like domain
CG478_013900	SM00382	ATPases associated with a variety of cellular activities
CG478_013980	SM00853	MutL C terminal dimerisation domain
CG478_013980	SM01340	CG478_013980
CG478_013985	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
CG478_013985	SM00534	ATPase domain of DNA mismatch repair MUTS family
CG478_014000	SM00729	Elongator protein 3, MiaB family, Radical SAM
CG478_014030	SM00322	K homology RNA-binding domain
CG478_014030	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CG478_014035	SM00382	ATPases associated with a variety of cellular activities
CG478_014040	SM00852	Probable molybdopterin binding domain
CG478_014090	SM00382	ATPases associated with a variety of cellular activities
CG478_014100	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CG478_014100	SM00866	CG478_014100
CG478_014105	SM00382	ATPases associated with a variety of cellular activities
CG478_014105	SM00843	CG478_014105
CG478_014145	SM00849	Metallo-beta-lactamase superfamily
CG478_014155	SM01130	CG478_014155
CG478_014165	SM00859	Semialdehyde dehydrogenase, NAD binding domain
CG478_014195	SM00316	Ribosomal protein S1-like RNA-binding domain
CG478_014195	SM00322	K homology RNA-binding domain
CG478_014200	SM01387	CG478_014200
CG478_014205	SM00904	Riboflavin kinase
CG478_014240	SM00316	Ribosomal protein S1-like RNA-binding domain
CG478_014240	SM00322	K homology RNA-binding domain
CG478_014250	SM00479	CG478_014250
CG478_014250	SM00481	DNA polymerase alpha chain like domain
CG478_014260	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CG478_014305	SM00382	ATPases associated with a variety of cellular activities
CG478_014305	SM01086	C-terminal, D2-small domain, of ClpB protein
CG478_014325	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
CG478_014325	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
CG478_014325	SM00493	CG478_014325
CG478_014335	SM00881	CoA binding domain
CG478_014385	SM00382	ATPases associated with a variety of cellular activities
CG478_014385	SM00962	SRP54-type protein, GTPase domain
CG478_014385	SM00963	SRP54-type protein, helical bundle domain
CG478_014395	SM00382	ATPases associated with a variety of cellular activities
CG478_014395	SM00962	SRP54-type protein, GTPase domain
CG478_014395	SM00963	SRP54-type protein, helical bundle domain
CG478_014400	SM00968	SMC proteins Flexible Hinge Domain
CG478_014405	SM00358	Double-stranded RNA binding motif
CG478_014405	SM00535	Ribonuclease III family
CG478_014415	SM00822	CG478_014415
CG478_014420	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CG478_014435	SM00487	DEAD-like helicases superfamily
CG478_014435	SM00490	helicase superfamily c-terminal domain
CG478_014440	SM01120	CG478_014440
CG478_014440	SM01121	CG478_014440
CG478_014460	SM00983	Thiamin pyrophosphokinase, vitamin B1 binding domain
CG478_014475	SM00220	Serine/Threonine protein kinases, catalytic domain
CG478_014475	SM00740	CG478_014475
CG478_014480	SM00331	Sigma factor PP2C-like phosphatases
CG478_014480	SM00332	Serine/threonine phosphatases, family 2C, catalytic domain
CG478_014505	SM00487	DEAD-like helicases superfamily
CG478_014505	SM00490	helicase superfamily c-terminal domain
CG478_014515	SM01409	CG478_014515
CG478_014520	SM00072	Guanylate kinase homologues.
CG478_014535	SM00831	Cation transporter/ATPase, N-terminus
CG478_014565	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
CG478_014580	SM00851	MGS-like domain
CG478_014580	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
CG478_014580	SM01209	CG478_014580
CG478_014585	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
CG478_014615	SM00363	S4 RNA-binding domain
CG478_014640	SM00363	S4 RNA-binding domain
CG478_014685	SM00864	Tubulin/FtsZ family, GTPase domain
CG478_014685	SM00865	Tubulin/FtsZ family, C-terminal domain
CG478_014690	SM00842	Cell division protein FtsA
CG478_014730	SM00740	CG478_014730
CG478_014735	SM00740	CG478_014735
CG478_014765	SM00717	SANT  SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
CG478_014800	SM00530	Helix-turn-helix XRE-family like proteins 
CG478_014810	SM00644	CG478_014810
CG478_014895	SM00507	HNH nucleases
CG478_015040	SM00530	Helix-turn-helix XRE-family like proteins 
CG478_015045	SM00530	Helix-turn-helix XRE-family like proteins 
CG478_015070	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CG478_015110	SM00855	Phosphoglycerate mutase family
CG478_015170	SM00878	Biotin carboxylase C-terminal domain
CG478_015195	SM00670	Large family of predicted nucleotide-binding domains
CG478_015220	SM00838	Elongation factor G C-terminus
CG478_015295	SM00861	Transketolase, pyrimidine binding domain
CG478_015330	SM00849	Metallo-beta-lactamase superfamily
CG478_015405	SM00052	Putative diguanylate phosphodiesterase
CG478_015450	SM00267	diguanylate cyclase
CG478_015490	SM00387	Histidine kinase-like ATPases
CG478_015490	SM00388	His Kinase A (phosphoacceptor) domain
CG478_015505	SM00354	helix_turn _helix lactose operon repressor
CG478_015530	SM00642	Alpha-amylase domain
CG478_015535	SM00642	Alpha-amylase domain
CG478_015540	SM00382	ATPases associated with a variety of cellular activities
CG478_015645	SM01007	Class II Aldolase and Adducin N-terminal domain
CG478_015675	SM00267	diguanylate cyclase
CG478_015710	SM01061	CAT RNA binding domain
CG478_015720	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CG478_015720	SM00866	CG478_015720
CG478_015735	SM00849	Metallo-beta-lactamase superfamily
CG478_015830	SM00387	Histidine kinase-like ATPases
CG478_015840	SM00936	Penicillin-binding protein 5, C-terminal domain 
CG478_015850	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CG478_015855	SM00382	ATPases associated with a variety of cellular activities
CG478_015880	SM00347	helix_turn_helix multiple antibiotic resistance protein
CG478_015900	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
CG478_016000	SM00354	helix_turn _helix lactose operon repressor
CG478_016020	SM00704	CDGSH-type zinc finger. Function unknown.
CG478_016050	SM00729	Elongator protein 3, MiaB family, Radical SAM
CG478_016050	SM00876	Biotin and Thiamin Synthesis associated domain
CG478_016100	SM00347	helix_turn_helix multiple antibiotic resistance protein
CG478_016125	SM00859	Semialdehyde dehydrogenase, NAD binding domain
CG478_016140	SM00849	Metallo-beta-lactamase superfamily
CG478_016165	SM00849	Metallo-beta-lactamase superfamily
CG478_016215	SM00382	ATPases associated with a variety of cellular activities
CG478_016225	SM00062	Bacterial periplasmic substrate-binding proteins
CG478_016225	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
CG478_016260	SM00861	Transketolase, pyrimidine binding domain
CG478_016280	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
CG478_016295	SM00091	PAS domain
CG478_016295	SM00382	ATPases associated with a variety of cellular activities
CG478_016315	SM00448	cheY-homologous receiver domain
CG478_016320	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CG478_016335	SM00363	S4 RNA-binding domain
CG478_016340	SM00861	Transketolase, pyrimidine binding domain
CG478_016375	SM00878	Biotin carboxylase C-terminal domain
CG478_016425	SM00382	ATPases associated with a variety of cellular activities
CG478_016445	SM00841	Elongation factor P, C-terminal
CG478_016445	SM01185	CG478_016445
CG478_016475	SM00529	Helix-turn-helix diphteria tox regulatory element
CG478_016490	SM00450	Rhodanese Homology Domain
CG478_016500	SM00354	helix_turn _helix lactose operon repressor
CG478_016540	SM00382	ATPases associated with a variety of cellular activities
CG478_016545	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CG478_016575	SM00487	DEAD-like helicases superfamily
CG478_016575	SM00490	helicase superfamily c-terminal domain
CG478_016635	SM00382	ATPases associated with a variety of cellular activities
CG478_016670	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CG478_016685	SM01018	B12 binding domain
CG478_016710	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CG478_016720	SM00849	Metallo-beta-lactamase superfamily
CG478_016760	SM00382	ATPases associated with a variety of cellular activities
CG478_016825	SM00382	ATPases associated with a variety of cellular activities
CG478_016840	SM00518	AP endonuclease family 2
CG478_016845	SM00487	DEAD-like helicases superfamily
CG478_016845	SM00490	helicase superfamily c-terminal domain
CG478_016880	SM00400	zinc finger
CG478_016880	SM00493	CG478_016880
CG478_016880	SM00766	DNA primase DnaG DnaB-binding
CG478_016895	SM00116	Domain in cystathionine beta-synthase and other proteins.
CG478_016930	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CG478_016960	SM00729	Elongator protein 3, MiaB family, Radical SAM
CG478_016975	SM00271	DnaJ molecular chaperone homology domain
CG478_016995	SM00729	Elongator protein 3, MiaB family, Radical SAM
CG478_017010	SM00838	Elongation factor G C-terminus
CG478_017040	SM00849	Metallo-beta-lactamase superfamily
CG478_017050	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CG478_017070	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CG478_017080	SM01103	CG478_017080
CG478_017125	SM00954	Region found in RelA / SpoT proteins
CG478_017130	SM00098	Alkaline phosphatase homologues
CG478_017185	SM00530	Helix-turn-helix XRE-family like proteins 
CG478_017195	SM00354	helix_turn _helix lactose operon repressor
CG478_017280	SM00732	Likely ribonuclease with RNase H fold.
CG478_017290	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
CG478_017320	SM00028	Tetratricopeptide repeats
CG478_017320	SM00671	Sel1-like repeats.
CG478_017340	SM00382	ATPases associated with a variety of cellular activities
CG478_017360	SM00342	helix_turn_helix, arabinose operon control protein
CG478_017405	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CG478_017405	SM00954	Region found in RelA / SpoT proteins
CG478_017460	SM01323	CG478_017460
CG478_017480	SM00382	ATPases associated with a variety of cellular activities
CG478_017485	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CG478_017555	SM00382	ATPases associated with a variety of cellular activities
CG478_017560	SM00387	Histidine kinase-like ATPases
CG478_017565	SM00448	cheY-homologous receiver domain
CG478_017565	SM00862	Transcriptional regulatory protein, C terminal
CG478_017575	SM01317	CG478_017575
CG478_017685	SM00257	Lysin motif
CG478_017695	SM01004	Delta-aminolevulinic acid dehydratase
CG478_017725	SM00382	ATPases associated with a variety of cellular activities
CG478_017725	SM00464	Found in ATP-dependent protease La (LON)
CG478_017730	SM00382	ATPases associated with a variety of cellular activities
CG478_017735	SM00382	ATPases associated with a variety of cellular activities
CG478_017735	SM00994	ClpX C4-type zinc finger
CG478_017735	SM01086	C-terminal, D2-small domain, of ClpB protein
CG478_017760	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CG478_017765	SM00822	CG478_017765
CG478_017765	SM00823	Phosphopantetheine attachment site
CG478_017765	SM00825	Beta-ketoacyl synthase
CG478_017765	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
CG478_017765	SM01294	CG478_017765
CG478_017775	SM00822	CG478_017775
CG478_017865	SM00909	Sporulation and spore germination
CG478_017875	SM00421	helix_turn_helix, Lux Regulon
CG478_017895	SM00382	ATPases associated with a variety of cellular activities
CG478_017945	SM00465	GIY-YIG type nucleases (URI domain)
CG478_017960	SM00893	Electron transfer flavoprotein domain
CG478_017965	SM00893	Electron transfer flavoprotein domain
CG478_018010	SM00382	ATPases associated with a variety of cellular activities
CG478_018015	SM00387	Histidine kinase-like ATPases
CG478_018015	SM00388	His Kinase A (phosphoacceptor) domain
CG478_018020	SM00448	cheY-homologous receiver domain
CG478_018020	SM00862	Transcriptional regulatory protein, C terminal
CG478_018035	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
CG478_018045	SM00363	S4 RNA-binding domain
CG478_018055	SM00463	Small MutS-related domain
CG478_018055	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
CG478_018055	SM00534	ATPase domain of DNA mismatch repair MUTS family
CG478_018060	SM00278	Helix-hairpin-helix DNA-binding motif class 1
CG478_018060	SM00481	DNA polymerase alpha chain like domain
CG478_018060	SM00483	DNA polymerase X family
CG478_018100	SM00873	B3/4 domain
CG478_018100	SM00874	tRNA synthetase B5 domain
CG478_018100	SM00896	Ferredoxin-fold anticodon binding domain
CG478_018110	SM00967	RNA 2'-O ribose methyltransferase substrate binding
CG478_018120	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CG478_018175	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
CG478_018210	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
CG478_018225	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
CG478_018225	SM01232	CG478_018225
CG478_018230	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
CG478_018230	SM00474	3'-5' exonuclease
CG478_018230	SM00475	5'-3' exonuclease
CG478_018230	SM00482	DNA polymerase A domain
CG478_018235	SM00091	PAS domain
CG478_018235	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CG478_018235	SM00387	Histidine kinase-like ATPases
CG478_018235	SM00388	His Kinase A (phosphoacceptor) domain
CG478_018240	SM00448	cheY-homologous receiver domain
CG478_018240	SM00862	Transcriptional regulatory protein, C terminal
CG478_018255	SM01329	CG478_018255
CG478_018300	SM00345	helix_turn_helix gluconate operon transcriptional repressor
CG478_018305	SM00919	Malic enzyme, NAD binding domain
CG478_018305	SM01274	CG478_018305
CG478_018310	SM00481	DNA polymerase alpha chain like domain
CG478_018335	SM00116	Domain in cystathionine beta-synthase and other proteins.
CG478_018340	SM00849	Metallo-beta-lactamase superfamily
CG478_018365	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
CG478_018365	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
CG478_018470	SM00981	CG478_018470
CG478_018515	SM00363	S4 RNA-binding domain
CG478_018515	SM01390	CG478_018515
CG478_018530	SM00860	SMI1 / KNR4 family
CG478_018540	SM00363	S4 RNA-binding domain
CG478_018560	SM00116	Domain in cystathionine beta-synthase and other proteins.
CG478_018580	SM00354	helix_turn _helix lactose operon repressor
CG478_018590	SM00830	Chorismate mutase type II
CG478_018630	SM00382	ATPases associated with a variety of cellular activities
CG478_018630	SM00843	CG478_018630
CG478_018685	SM00849	Metallo-beta-lactamase superfamily
CG478_018705	SM00642	Alpha-amylase domain
CG478_018720	SM00420	helix_turn_helix, Deoxyribose operon repressor
CG478_018725	SM00363	S4 RNA-binding domain
CG478_018745	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CG478_018770	SM01058	CarD-like/TRCF domain
CG478_018800	SM00852	Probable molybdopterin binding domain
CG478_018835	SM00729	Elongator protein 3, MiaB family, Radical SAM
CG478_018840	SM00100	Cyclic nucleotide-monophosphate binding domain
CG478_018840	SM00419	helix_turn_helix, cAMP Regulatory protein
CG478_018845	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
CG478_018875	SM00450	Rhodanese Homology Domain
CG478_018935	SM00382	ATPases associated with a variety of cellular activities
CG478_018955	SM00729	Elongator protein 3, MiaB family, Radical SAM
CG478_018965	SM00382	ATPases associated with a variety of cellular activities
CG478_018980	SM00871	Bacterial transcription activator, effector binding domain
CG478_018985	SM00420	helix_turn_helix, Deoxyribose operon repressor
CG478_019015	SM00852	Probable molybdopterin binding domain
CG478_019080	SM01276	CG478_019080
CG478_019115	SM00346	helix_turn_helix isocitrate lyase regulation
CG478_019120	SM00047	Lysozyme subfamily 2
CG478_019120	SM00644	CG478_019120
CG478_019125	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CG478_019150	SM00382	ATPases associated with a variety of cellular activities
CG478_019185	SM01234	CG478_019185
CG478_019190	SM00947	Carbonic anhydrase
CG478_019205	SM00894	Excalibur calcium-binding domain
CG478_019250	SM00899	CG478_019250
CG478_019275	SM00046	Diacylglycerol kinase catalytic domain (presumed)
CG478_019280	SM00382	ATPases associated with a variety of cellular activities
CG478_019290	SM00448	cheY-homologous receiver domain
CG478_019290	SM00862	Transcriptional regulatory protein, C terminal
CG478_019295	SM00387	Histidine kinase-like ATPases
CG478_019305	SM00382	ATPases associated with a variety of cellular activities
CG478_019325	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
CG478_019365	SM00357	Cold shock protein domain
CG478_019405	SM00642	Alpha-amylase domain
CG478_019570	SM00316	Ribosomal protein S1-like RNA-binding domain
CG478_019580	SM00344	helix_turn_helix ASNC type
CG478_019610	SM01298	CG478_019610
CG478_019615	SM00479	CG478_019615
CG478_019760	SM00382	ATPases associated with a variety of cellular activities
CG478_019770	SM00850	LytTr DNA-binding domain
CG478_019820	SM00530	Helix-turn-helix XRE-family like proteins 
CG478_019890	SM00422	helix_turn_helix, mercury resistance
CG478_019910	SM00729	Elongator protein 3, MiaB family, Radical SAM
CG478_019970	SM00382	ATPases associated with a variety of cellular activities
CG478_019985	SM00382	ATPases associated with a variety of cellular activities
CG478_019985	SM00930	CG478_019985
CG478_020000	SM00493	CG478_020000
CG478_020105	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CG478_020105	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CG478_020165	SM00448	cheY-homologous receiver domain
CG478_020165	SM00862	Transcriptional regulatory protein, C terminal
CG478_020170	SM00387	Histidine kinase-like ATPases
CG478_020170	SM00388	His Kinase A (phosphoacceptor) domain
CG478_020175	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CG478_020175	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CG478_020180	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CG478_020180	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CG478_020200	SM00347	helix_turn_helix multiple antibiotic resistance protein
CG478_020245	SM00382	ATPases associated with a variety of cellular activities
CG478_020305	SM00317	SET (Su(var)3-9, Enhancer-of-zeste, Trithorax) domain
CG478_020330	SM00342	helix_turn_helix, arabinose operon control protein
CG478_020380	SM00316	Ribosomal protein S1-like RNA-binding domain
CG478_020380	SM00357	Cold shock protein domain
CG478_020380	SM00955	CG478_020380
CG478_020405	SM01192	CG478_020405
CG478_020405	SM01193	CG478_020405
CG478_020425	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
CG478_020550	SM00028	Tetratricopeptide repeats
CG478_020590	SM00487	DEAD-like helicases superfamily
CG478_020590	SM00490	helicase superfamily c-terminal domain
CG478_020600	SM00422	helix_turn_helix, mercury resistance
CG478_020610	SM00530	Helix-turn-helix XRE-family like proteins 
CG478_020640	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CG478_020640	SM00245	tail specific protease
CG478_020650	SM00382	ATPases associated with a variety of cellular activities
CG478_020670	SM00957	SecA DEAD-like domain
CG478_020670	SM00958	SecA preprotein cross-linking domain
CG478_020685	SM00357	Cold shock protein domain
CG478_020695	SM00487	DEAD-like helicases superfamily
CG478_020695	SM00490	helicase superfamily c-terminal domain
CG478_020750	SM00382	ATPases associated with a variety of cellular activities
CG478_020755	SM00754	A domain in the BMP inhibitor chordin and in microbial proteins.
CG478_020845	SM00287	Bacterial SH3 domain homologues
CG478_020875	SM00287	Bacterial SH3 domain homologues
CG478_020895	SM00487	DEAD-like helicases superfamily
CG478_020895	SM00490	helicase superfamily c-terminal domain
CG478_020940	SM00382	ATPases associated with a variety of cellular activities
CG478_020955	SM00646	CG478_020955
CG478_020975	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CG478_020975	SM00387	Histidine kinase-like ATPases
CG478_020975	SM00388	His Kinase A (phosphoacceptor) domain
CG478_020980	SM00448	cheY-homologous receiver domain
CG478_020980	SM00862	Transcriptional regulatory protein, C terminal
CG478_021005	SM00382	ATPases associated with a variety of cellular activities
CG478_021065	SM00382	ATPases associated with a variety of cellular activities
CG478_021070	SM00850	LytTr DNA-binding domain
CG478_021150	SM00052	Putative diguanylate phosphodiesterase
CG478_021150	SM00091	PAS domain
CG478_021150	SM00267	diguanylate cyclase
CG478_021155	SM00052	Putative diguanylate phosphodiesterase
CG478_021155	SM00091	PAS domain
CG478_021155	SM00267	diguanylate cyclase
CG478_021175	SM00382	ATPases associated with a variety of cellular activities
CG478_021250	SM00226	Low molecular weight phosphatase family
CG478_021275	SM00903	Flavin reductase like domain
CG478_021310	SM00937	CG478_021310
CG478_021325	SM00357	Cold shock protein domain
CG478_021325	SM00382	ATPases associated with a variety of cellular activities
CG478_021325	SM00959	Rho termination factor, N-terminal domain
CG478_021345	SM00448	cheY-homologous receiver domain
CG478_021395	SM00155	Phospholipase D. Active site motifs.
CG478_021405	SM00530	Helix-turn-helix XRE-family like proteins 
CG478_021410	SM00421	helix_turn_helix, Lux Regulon
CG478_021410	SM00448	cheY-homologous receiver domain
CG478_021425	SM00382	ATPases associated with a variety of cellular activities
CG478_021445	SM00836	DALR anticodon binding domain
CG478_021445	SM01016	Arginyl tRNA synthetase N terminal dom
CG478_021485	SM00422	helix_turn_helix, mercury resistance
CG478_021515	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
CG478_021525	SM00382	ATPases associated with a variety of cellular activities
CG478_021565	SM00936	Penicillin-binding protein 5, C-terminal domain 
CG478_021610	SM00986	Uracil DNA glycosylase superfamily
CG478_021610	SM00987	UreE urease accessory protein, C-terminal domain 
CG478_021620	SM00382	ATPases associated with a variety of cellular activities
CG478_021665	SM00448	cheY-homologous receiver domain
CG478_021665	SM00850	LytTr DNA-binding domain
CG478_021700	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
CG478_021755	SM00382	ATPases associated with a variety of cellular activities
CG478_021790	SM00448	cheY-homologous receiver domain
CG478_021790	SM00850	LytTr DNA-binding domain
CG478_021795	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
CG478_021795	SM00387	Histidine kinase-like ATPases
CG478_021850	SM01240	CG478_021850
CG478_021895	SM00382	ATPases associated with a variety of cellular activities
CG478_021915	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
CG478_021920	SM00849	Metallo-beta-lactamase superfamily
CG478_021935	SM00091	PAS domain
CG478_021935	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
CG478_021935	SM00387	Histidine kinase-like ATPases
CG478_021935	SM00388	His Kinase A (phosphoacceptor) domain
CG478_021940	SM00448	cheY-homologous receiver domain
CG478_021940	SM00862	Transcriptional regulatory protein, C terminal
CG478_021965	SM00788	Adenylosuccinate synthetase
CG478_021980	SM00267	diguanylate cyclase
CG478_022025	SM00470	ParB-like nuclease domain
CG478_022035	SM00470	ParB-like nuclease domain
CG478_022045	SM01228	CG478_022045
CG478_022055	SM00393	Putative single-stranded nucleic acids-binding domain
CG478_022055	SM01245	CG478_022055
CG478_022140	SM00704	CDGSH-type zinc finger. Function unknown.
CG478_022420	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
CG478_022435	SM00028	Tetratricopeptide repeats
CG478_022475	SM00857	Resolvase, N terminal domain
