locus-tag	class	description
JC772_00020	COG0740	serine-type endopeptidase activity
JC772_00045	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
JC772_00060	COG0527	aspartate kinase activity
JC772_00065	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
JC772_00070	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
JC772_00075	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
JC772_00080	COG1873	PFAM PRC-barrel domain
JC772_00085	COG0612	Peptidase, M16
JC772_00090	COG0726	polysaccharide deacetylase
JC772_00095	COG1185	polyribonucleotide nucleotidyltransferase activity
JC772_00105	COG0196	riboflavin kinase activity
JC772_00110	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
JC772_00115	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
JC772_00120	COG1550	Protein conserved in bacteria
JC772_00125	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
JC772_00130	COG1358	cellular component organization or biogenesis
JC772_00135	COG2740	Nucleic-acid-binding protein implicated in transcription termination
JC772_00140	COG0195	Participates in both transcription termination and antitermination
JC772_00145	COG0779	Required for maturation of 30S ribosomal subunits
JC772_00155	COG0442	prolyl-tRNA aminoacylation
JC772_00160	COG0750	zinc metalloprotease
JC772_00170	COG4589	Belongs to the CDS family
JC772_00180	COG0233	cytoplasmic translational termination
JC772_00185	COG0528	UMP kinase activity
JC772_00190	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
JC772_00195	COG0052	Belongs to the universal ribosomal protein uS2 family
JC772_00200	COG4465	DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor
JC772_00205	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
JC772_00210	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
JC772_00215	COG4974	Belongs to the 'phage' integrase family
JC772_00220	COG1206	Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
JC772_00225	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
JC772_00230	COG0758	DNA mediated transformation
JC772_00235	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
JC772_00240	COG0045	succinate-CoA ligase (ADP-forming) activity
JC772_00245	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
JC772_00260	COG0335	large ribosomal subunit rRNA binding
JC772_00265	COG0336	Belongs to the RNA methyltransferase TrmD family
JC772_00270	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
JC772_00275	COG1837	Belongs to the UPF0109 family
JC772_00280	COG0228	four-way junction DNA binding
JC772_00285	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
JC772_00290	COG2739	Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
JC772_00295	COG0552	protein localization to endoplasmic reticulum
JC772_00300	COG1196	nuclear chromosome segregation
JC772_00305	COG0571	ribonuclease III activity
JC772_00310	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
JC772_00315	COG1028	Short-chain dehydrogenase reductase Sdr
JC772_00320	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
JC772_00325	COG0416	fatty acid biosynthetic process
JC772_00330	COG1349	DNA-binding transcription factor activity
JC772_00330	COG2050	protein possibly involved in aromatic compounds catabolism
JC772_00335	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
JC772_00340	COG1461	Dihydroxyacetone kinase
JC772_00345	COG1302	Protein conserved in bacteria
JC772_00350	COG0227	Belongs to the bacterial ribosomal protein bL28 family
JC772_00360	COG1564	THIamine pyrophosphokinase
JC772_00365	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
JC772_00370	COG1162	GTPase activity
JC772_00375	COG2815	serine threonine protein kinase
JC772_00375	COG0515	serine threonine protein kinase
JC772_00380	COG0631	protein serine/threonine phosphatase activity
JC772_00385	COG0820	rRNA (adenine-C2-)-methyltransferase activity
JC772_00390	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
JC772_00390	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
JC772_00395	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
JC772_00400	COG0242	peptide deformylase activity
JC772_00405	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
JC772_00410	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
JC772_00415	COG1758	RNA polymerase activity
JC772_00430	COG1561	YicC-like family, N-terminal region
JC772_00435	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
JC772_00460	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
JC772_00465	COG0284	orotidine-5'-phosphate decarboxylase activity
JC772_00470	COG0167	dihydroorotate dehydrogenase activity
JC772_00475	COG0543	2 iron, 2 sulfur cluster binding
JC772_00480	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
JC772_00490	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
JC772_00495	COG0540	Belongs to the ATCase OTCase family
JC772_00505	COG2065	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
JC772_00510	COG0564	pseudouridine synthase activity
JC772_00515	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
JC772_00525	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
JC772_00530	COG3599	regulation of cell shape
JC772_00535	COG2302	S4 RNA-binding domain
JC772_00540	COG0762	integral membrane protein
JC772_00545	COG1799	cell septum assembly
JC772_00550	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
JC772_00560	COG1873	PFAM PRC-barrel domain
JC772_00565	COG1191	sigma factor activity
JC772_00570	COG1191	sigma factor activity
JC772_00580	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
JC772_00585	COG0849	cell division
JC772_00590	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
JC772_00600	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
JC772_00605	COG0772	Belongs to the SEDS family
JC772_00610	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
JC772_00615	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
JC772_00620	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
JC772_00625	COG0768	penicillin binding
JC772_00630	COG0768	penicillin binding
JC772_00635	COG4839	cell division protein FtsL
JC772_00640	COG0275	rRNA processing
JC772_00645	COG4365	Involved in bacillithiol (BSH) biosynthesis. May catalyze the last step of the pathway, the addition of cysteine to glucosamine malate (GlcN-Mal) to generate BSH
JC772_00650	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
JC772_00655	COG0454	-acetyltransferase
JC772_00665	COG0333	Belongs to the bacterial ribosomal protein bL32 family
JC772_00670	COG1399	metal-binding, possibly nucleic acid-binding protein
JC772_00775	COG1802	Transcriptional regulator
JC772_00775	COG4626	Terminase
JC772_00865	COG0756	dUTP diphosphatase activity
JC772_00900	COG3723	Recombinational DNA repair protein, rece pathway
JC772_00910	COG5377	YqaJ viral recombinase family
JC772_00960	COG0582	viral genome integration into host DNA
JC772_00965	COG1323	Belongs to the UPF0348 family
JC772_00970	COG3480	Lon protease (S16) C-terminal proteolytic domain
JC772_00975	COG1752	Esterase of the alpha-beta hydrolase superfamily
JC772_00980	COG3314	Sporulation integral membrane protein YlbJ
JC772_00985	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
JC772_00990	COG0742	ribosomal rna small subunit methyltransferase
JC772_01000	COG4471	UPF0298 protein
JC772_01005	COG3679	Belongs to the UPF0342 family
JC772_01010	COG0406	alpha-ribazole phosphatase activity
JC772_01025	COG2340	Cysteine-rich secretory protein family
JC772_01035	COG3336	cytochrome c oxidase
JC772_01050	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
JC772_01060	COG0109	protoheme IX farnesyltransferase activity
JC772_01065	COG1612	heme a metabolic process
JC772_01070	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
JC772_01075	COG0772	Belongs to the SEDS family
JC772_01080	COG4838	Belongs to the UPF0358 family
JC772_01085	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
JC772_01090	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
JC772_01100	COG4896	Protein conserved in bacteria
JC772_01115	COG1217	gtp-binding protein TYPA
JC772_01125	COG0483	inositol monophosphate 1-phosphatase activity
JC772_01135	COG4493	Belongs to the UPF0637 family
JC772_01140	COG4476	Belongs to the UPF0223 family
JC772_01145	COG1982	Orn Lys Arg decarboxylase major
JC772_01185	COG0508	dehydrogenase complex catalyzes the overall conversion of
JC772_01195	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
JC772_01210	COG0561	phosphatase activity
JC772_01215	COG5503	Protein of unknown function (DUF1447)
JC772_01220	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
JC772_01225	COG0569	domain protein
JC772_01235	COG1473	amidohydrolase
JC772_01240	COG2171	N-acyltransferase activity
JC772_01245	COG0583	DNA-binding transcription factor activity
JC772_01250	COG0517	IMP dehydrogenase activity
JC772_01260	COG1978	Selenoprotein B, glycine betaine sarcosine D-proline reductase family
JC772_01265	COG4703	Protein of unknown function (DUF1797)
JC772_01280	COG2200	EAL domain
JC772_01285	COG1028	Short-chain dehydrogenase reductase Sdr
JC772_01290	COG1408	metallophosphoesterase
JC772_01300	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
JC772_01340	COG2814	Major facilitator Superfamily
JC772_01345	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
JC772_01355	COG3209	COG3209 Rhs family protein
JC772_01365	COG2205	protein histidine kinase activity
JC772_01375	COG0436	Aminotransferase
JC772_01380	COG1609	Transcriptional regulator
JC772_01385	COG3833	ABC-type maltose transport systems, permease component
JC772_01390	COG1175	transmembrane transport
JC772_01395	COG2182	Extracellular solute-binding protein
JC772_01405	COG0366	Alpha amylase catalytic
JC772_01410	COG3842	ATPase activity
JC772_01435	COG0183	Belongs to the thiolase family
JC772_01460	COG1695	Transcriptional regulator
JC772_01465	COG1028	Short-chain dehydrogenase reductase Sdr
JC772_01475	COG0182	Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P)
JC772_01480	COG4857	Catalyzes the phosphorylation of methylthioribose into methylthioribose-1-phosphate
JC772_01485	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
JC772_01490	COG0436	Aminotransferase
JC772_01495	COG1850	ribulose-bisphosphate carboxylase activity
JC772_01500	COG4359	Dephosphorylates 2-hydroxy-3-keto-5-methylthiopentenyl- 1-phosphate (HK-MTPenyl-1-P) yielding 1,2-dihydroxy-3-keto-5- methylthiopentene (DHK-MTPene)
JC772_01505	COG0235	Class ii aldolase
JC772_01510	COG1791	Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway
JC772_01525	COG2084	Dehydrogenase
JC772_01535	COG2199	diguanylate cyclase activity
JC772_01540	COG0778	Nitroreductase
JC772_01565	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
JC772_01565	COG1263	PTS System
JC772_01565	COG2190	(PTS) system
JC772_01570	COG3711	transcriptional antiterminator
JC772_01580	COG2188	Transcriptional regulator
JC772_01585	COG0363	glucosamine-6-phosphate deaminase activity
JC772_01600	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
JC772_01605	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
JC772_01615	COG1547	Domain of unknown function (DUF309)
JC772_01625	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
JC772_01630	COG4086	secreted protein
JC772_01635	COG0561	phosphatase activity
JC772_01640	COG0697	spore germination
JC772_01655	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
JC772_01680	COG0733	neurotransmitter:sodium symporter activity
JC772_01690	COG2172	sigma factor antagonist activity
JC772_01700	COG1686	Belongs to the peptidase S11 family
JC772_01705	COG1725	Transcriptional regulator
JC772_01710	COG1131	(ABC) transporter
JC772_01730	COG1846	Transcriptional regulator
JC772_01745	COG0598	Magnesium transport protein CorA
JC772_01770	COG4974	Belongs to the 'phage' integrase family
JC772_01780	COG0735	belongs to the Fur family
JC772_01785	COG1300	Membrane
JC772_01805	COG0667	Aldo Keto reductase
JC772_01810	COG0656	L-ascorbic acid biosynthetic process
JC772_01815	COG0456	acetyltransferase
JC772_01815	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
JC772_01825	COG0737	Belongs to the 5'-nucleotidase family
JC772_01825	COG1525	nuclease
JC772_01825	COG4085	toxin activity
JC772_01835	COG0596	Alpha beta hydrolase
JC772_01840	COG2056	Na+-H+ antiporter family
JC772_01845	COG1609	Transcriptional regulator
JC772_01850	COG0456	acetyltransferase
JC772_01855	COG1073	alpha beta
JC772_01870	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
JC772_01870	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
JC772_01875	COG0307	riboflavin synthase, alpha
JC772_01880	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
JC772_01880	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
JC772_01895	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
JC772_01900	COG4106	trans-aconitate 2-methyltransferase activity
JC772_01905	COG0596	Alpha beta hydrolase
JC772_01910	COG0156	8-amino-7-oxononanoate synthase activity
JC772_01920	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
JC772_01930	COG1757	Na H antiporter
JC772_01935	COG0737	Belongs to the 5'-nucleotidase family
JC772_01965	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
JC772_01975	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
JC772_01985	COG0300	oxidoreductase activity
JC772_01990	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
JC772_01995	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
JC772_02000	COG1760	l-serine dehydratase
JC772_02005	COG1760	l-serine dehydratase
JC772_02015	COG1234	tRNA 3'-trailer cleavage
JC772_02035	COG2195	Cleaves the N-terminal amino acid of tripeptides
JC772_02040	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
JC772_02055	COG1376	ErfK ybiS ycfS ynhG family protein
JC772_02060	COG4129	membrane
JC772_02065	COG1126	abc transporter atp-binding protein
JC772_02070	COG0765	amino acid transport
JC772_02075	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
JC772_02090	COG2816	NAD+ diphosphatase activity
JC772_02095	COG0772	Belongs to the SEDS family
JC772_02100	COG0508	dehydrogenase complex catalyzes the overall conversion of
JC772_02105	COG0022	dehydrogenase e1 component
JC772_02110	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
JC772_02115	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
JC772_02120	COG3426	butyrate kinase activity
JC772_02130	COG0280	phosphate acetyltransferase
JC772_02135	COG3829	transcription factor binding
JC772_02135	COG3290	protein histidine kinase activity
JC772_02145	COG0584	glycerophosphoryl diester phosphodiesterase
JC772_02150	COG3093	addiction module antidote protein HigA
JC772_02155	COG0745	RESPONSE REGULATOR receiver
JC772_02160	COG0750	zinc metalloprotease
JC772_02165	COG0497	DNA recombination
JC772_02175	COG1189	Ribosomal RNA methyltransferase RrmJ FtsJ
JC772_02180	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
JC772_02190	COG1722	exodeoxyribonuclease VII activity
JC772_02195	COG1570	exodeoxyribonuclease VII activity
JC772_02200	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
JC772_02205	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
JC772_02210	COG1302	Protein conserved in bacteria
JC772_02215	COG0439	Biotin carboxylase
JC772_02220	COG0511	ligase activity, forming carbon-carbon bonds
JC772_02265	COG3854	ATPases associated with a variety of cellular activities
JC772_02285	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
JC772_02290	COG0006	proline dipeptidase activity
JC772_02295	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
JC772_02305	COG3872	metal-dependent enzyme
JC772_02315	COG1321	iron dependent repressor
JC772_02330	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
JC772_02340	COG1609	Transcriptional regulator
JC772_02350	COG2076	Multidrug Resistance protein
JC772_02355	COG2076	Multidrug Resistance protein
JC772_02375	COG1131	(ABC) transporter
JC772_02380	COG1725	Transcriptional regulator
JC772_02395	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
JC772_02400	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
JC772_02405	COG0404	The glycine cleavage system catalyzes the degradation of glycine
JC772_02410	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
JC772_02440	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
JC772_02465	COG1459	type II secretion system
JC772_02470	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
JC772_02505	COG1078	dGTPase activity
JC772_02520	COG0646	methionine synthase
JC772_02520	COG1410	methionine synthase
JC772_02525	COG0646	methionine synthase
JC772_02525	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
JC772_02530	COG0626	cystathionine gamma-synthase activity
JC772_02535	COG0626	cystathionine gamma-synthase activity
JC772_02550	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
JC772_02560	COG1940	carbohydrate kinase activity
JC772_02565	COG4483	Protein conserved in bacteria
JC772_02570	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
JC772_02575	COG0267	Belongs to the bacterial ribosomal protein bL33 family
JC772_02580	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
JC772_02585	COG0704	Plays a role in the regulation of phosphate uptake
JC772_02595	COG0581	inorganic phosphate transmembrane transporter activity
JC772_02600	COG0573	inorganic phosphate transmembrane transporter activity
JC772_02605	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
JC772_02610	COG0768	penicillin binding
JC772_02615	COG0477	Major facilitator Superfamily
JC772_02620	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
JC772_02640	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
JC772_02645	COG0735	belongs to the Fur family
JC772_02650	COG1108	ABC-type Mn2 Zn2 transport systems permease components
JC772_02655	COG1121	(ABC) transporter
JC772_02660	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
JC772_02670	COG0648	Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
JC772_02685	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
JC772_02690	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
JC772_02695	COG2384	SAM-dependent methyltransferase
JC772_02705	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
JC772_02710	COG0358	DNA primase activity
JC772_02715	COG1671	Belongs to the UPF0178 family
JC772_02720	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
JC772_02725	COG0517	IMP dehydrogenase activity
JC772_02730	COG1381	Involved in DNA repair and RecF pathway recombination
JC772_02740	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
JC772_02750	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
JC772_02755	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
JC772_02760	COG1480	7TM receptor with intracellular HD hydrolase
JC772_02765	COG1702	phosphate starvation-inducible protein PhoH
JC772_02780	COG1610	YqeY-like protein
JC772_02785	COG0828	Belongs to the bacterial ribosomal protein bS21 family
JC772_02790	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
JC772_02795	COG1385	rRNA (uridine-N3-)-methyltransferase activity
JC772_02800	COG2264	protein methyltransferase activity
JC772_02805	COG0484	heat shock protein binding
JC772_02810	COG0443	Heat shock 70 kDa protein
JC772_02815	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
JC772_02820	COG1420	regulation of RNA biosynthetic process
JC772_02825	COG0635	Involved in the biosynthesis of porphyrin-containing compound
JC772_02830	COG1733	regulation of RNA biosynthetic process
JC772_02835	COG0693	protein deglycase activity
JC772_02840	COG0481	GTPase activity
JC772_02850	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
JC772_02855	COG0268	Binds directly to 16S ribosomal RNA
JC772_02860	COG1466	dna polymerase III delta subunit
JC772_02870	COG2333	competence protein COMEC
JC772_02870	COG0658	competence protein
JC772_02875	COG2131	deaminase
JC772_02880	COG1555	photosystem II stabilization
JC772_02880	COG1596	polysaccharide export
JC772_02885	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
JC772_02890	COG2226	methyltransferase
JC772_02895	COG0799	negative regulation of ribosome biogenesis
JC772_02900	COG1713	HD superfamily hydrolase involved in NAD metabolism
JC772_02905	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
JC772_02910	COG1534	Rna-binding protein
JC772_02915	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
JC772_02920	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
JC772_02925	COG2179	HAD superfamily (subfamily IIIA) phosphatase, TIGR01668
JC772_02935	COG0688	phosphatidylethanolamine metabolic process
JC772_02950	COG0267	Belongs to the bacterial ribosomal protein bL33 family
JC772_02955	COG2357	RelA SpoT domain protein
JC772_02960	COG1785	Belongs to the alkaline phosphatase family
JC772_02965	COG0456	acetyltransferase
JC772_02970	COG2267	carboxylic ester hydrolase activity
JC772_02995	COG3186	Phenylalanine-4-hydroxylase
JC772_03000	COG2154	pterin-4-alpha-carbinolamine dehydratase
JC772_03005	COG2514	catechol 2,3-dioxygenase activity
JC772_03010	COG2259	Doxx family
JC772_03025	COG1609	Transcriptional regulator
JC772_03035	COG0626	cystathionine gamma-synthase activity
JC772_03040	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
JC772_03045	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
JC772_03050	COG2226	methyltransferase
JC772_03065	COG0768	penicillin binding
JC772_03075	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
JC772_03080	COG0572	uridine kinase
JC772_03085	COG0826	peptidase U32
JC772_03090	COG0826	peptidase U32
JC772_03095	COG4122	O-methyltransferase activity
JC772_03100	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
JC772_03110	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
JC772_03115	COG4472	Bacterial protein of unknown function (DUF965)
JC772_03120	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
JC772_03125	COG0628	permease
JC772_03145	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
JC772_03155	COG0482	sulfurtransferase activity
JC772_03160	COG1104	cysteine desulfurase activity
JC772_03165	COG1959	2 iron, 2 sulfur cluster binding
JC772_03170	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
JC772_03190	COG2207	Transcriptional regulator
JC772_03200	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
JC772_03205	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
JC772_03210	COG0124	histidyl-tRNA synthetase
JC772_03230	COG1490	D-aminoacyl-tRNA deacylase activity
JC772_03235	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
JC772_03240	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
JC772_03245	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
JC772_03245	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
JC772_03250	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
JC772_03255	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
JC772_03255	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
JC772_03265	COG2244	polysaccharide biosynthetic process
JC772_03285	COG1862	Preprotein translocase
JC772_03290	COG0343	queuine tRNA-ribosyltransferase activity
JC772_03295	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
JC772_03305	COG2255	four-way junction helicase activity
JC772_03310	COG0632	four-way junction helicase activity
JC772_03315	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
JC772_03335	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
JC772_03340	COG0157	Belongs to the NadC ModD family
JC772_03345	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
JC772_03350	COG1104	cysteine desulfurase activity
JC772_03355	COG1827	regulation of RNA biosynthetic process
JC772_03360	COG2258	MOSC domain
JC772_03365	COG0077	Prephenate dehydratase
JC772_03370	COG0577	efflux transmembrane transporter activity
JC772_03375	COG0577	efflux transmembrane transporter activity
JC772_03380	COG1136	(ABC) transporter
JC772_03385	COG5002	protein histidine kinase activity
JC772_03390	COG0745	RESPONSE REGULATOR receiver
JC772_03400	COG3290	protein histidine kinase activity
JC772_03405	COG0211	Belongs to the bacterial ribosomal protein bL27 family
JC772_03410	COG2868	ribosomal protein
JC772_03415	COG0261	This protein binds to 23S rRNA in the presence of protein L20
JC772_03420	COG1530	ribonuclease E activity
JC772_03425	COG1994	Peptidase M50
JC772_03430	COG0739	heme binding
JC772_03435	COG2894	cell division
JC772_03440	COG0850	regulation of cytokinetic process
JC772_03450	COG1792	Involved in formation and maintenance of cell shape
JC772_03455	COG1077	Cell shape determining protein MreB Mrl
JC772_03475	COG0424	maF-like protein
JC772_03485	COG0285	dihydrofolate synthase activity
JC772_03505	COG1388	LysM domain
JC772_03505	COG1388	LysM domain
JC772_03510	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
JC772_03515	COG0113	porphobilinogen synthase activity
JC772_03520	COG1587	Uroporphyrinogen-III synthase
JC772_03525	COG0181	hydroxymethylbilane synthase activity
JC772_03530	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
JC772_03535	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
JC772_03540	COG0218	Necessary for normal cell division and for the maintenance of normal septation
JC772_03550	COG1067	ATP-dependent peptidase activity
JC772_03550	COG0470	DNA polymerase III
JC772_03555	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
JC772_03560	COG0544	peptidyl-prolyl cis-trans isomerase activity
JC772_03585	COG1028	Short-chain dehydrogenase reductase Sdr
JC772_03585	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
JC772_03585	COG3321	synthase
JC772_03585	COG4221	oxidoreductase activity
JC772_03600	COG1033	growth of symbiont in host cell
JC772_03600	COG2409	Drug exporters of the RND superfamily
JC772_03610	COG1309	transcriptional regulator
JC772_03670	COG0622	Phosphoesterase
JC772_03680	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
JC772_03685	COG5401	PFAM Sporulation and spore germination
JC772_03695	COG2197	response regulator
JC772_03705	COG1959	2 iron, 2 sulfur cluster binding
JC772_03710	COG1668	transmembrane transport
JC772_03715	COG4152	abc transporter atp-binding protein
JC772_03720	COG1360	Flagellar Motor Protein
JC772_03725	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
JC772_03730	COG1876	peptidase activity
JC772_03740	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
JC772_03745	COG1053	succinate dehydrogenase
JC772_03750	COG2009	succinate dehydrogenase
JC772_03755	COG1719	4-vinyl reductase, 4VR
JC772_03770	COG3118	belongs to the thioredoxin family
JC772_03775	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
JC772_03780	COG2086	electron transfer activity
JC772_03785	COG1024	Enoyl-CoA hydratase
JC772_03790	COG1309	transcriptional regulator
JC772_03795	COG0318	PFAM AMP-dependent synthetase and ligase
JC772_03805	COG2318	DinB family
JC772_03825	COG1131	(ABC) transporter
JC772_03830	COG2205	protein histidine kinase activity
JC772_03835	COG0745	RESPONSE REGULATOR receiver
JC772_03845	COG4895	conserved protein (DUF2196)
JC772_03850	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
JC772_03855	COG1114	Component of the transport system for branched-chain amino acids
JC772_03860	COG1187	pseudouridine synthase activity
JC772_03865	COG1193	negative regulation of DNA recombination
JC772_03870	COG1796	DNA polymerase
JC772_03870	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
JC772_03875	COG1286	toxin biosynthetic process
JC772_03880	COG3027	Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
JC772_03885	COG1039	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
JC772_03895	COG0017	Asparaginyl-tRNA synthetase
JC772_03905	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
JC772_03910	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
JC772_03920	COG1418	mRNA catabolic process
JC772_03930	COG2814	Major facilitator Superfamily
JC772_03935	COG1566	PFAM secretion protein HlyD family protein
JC772_03940	COG1309	transcriptional regulator
JC772_03945	COG1363	Peptidase, m42
JC772_03955	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
JC772_03960	COG0291	Belongs to the bacterial ribosomal protein bL35 family
JC772_03970	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
JC772_03980	COG1484	DNA-dependent DNA replication
JC772_03985	COG3611	Membrane attachment protein
JC772_03990	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
JC772_03995	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
JC772_04000	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
JC772_04010	COG1971	Probably functions as a manganese efflux pump
JC772_04020	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
JC772_04020	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
JC772_04025	COG5002	protein histidine kinase activity
JC772_04030	COG0745	RESPONSE REGULATOR receiver
JC772_04045	COG0039	L-malate dehydrogenase activity
JC772_04050	COG0538	isocitrate dehydrogenase activity
JC772_04055	COG0372	Belongs to the citrate synthase family
JC772_04060	COG2707	UPF0756 membrane protein
JC772_04065	COG0628	permease
JC772_04070	COG3030	protein affecting phage T7 exclusion by the F plasmid
JC772_04080	COG0205	6-phosphofructokinase activity
JC772_04085	COG0825	malonyl-CoA metabolic process
JC772_04090	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
JC772_04095	COG1725	Transcriptional regulator
JC772_04100	COG0281	malic enzyme
JC772_04105	COG0587	DNA-directed DNA polymerase activity
JC772_04120	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
JC772_04130	COG4109	DRTGG domain
JC772_04135	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
JC772_04140	COG0006	proline dipeptidase activity
JC772_04165	COG1028	Short-chain dehydrogenase reductase Sdr
JC772_04170	COG0589	response to stress
JC772_04190	COG0165	Argininosuccinate lyase
JC772_04195	COG0137	argininosuccinate synthase activity
JC772_04205	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
JC772_04215	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
JC772_04220	COG0827	DNA restriction-modification system
JC772_04225	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
JC772_04230	COG3874	Sporulation protein YtfJ
JC772_04245	COG1574	metal-dependent hydrolase with the TIM-barrel fold
JC772_04250	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
JC772_04260	COG0301	tRNA thio-modification
JC772_04265	COG1104	cysteine desulfurase activity
JC772_04270	COG4477	modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
JC772_04275	COG0583	DNA-binding transcription factor activity
JC772_04280	COG0697	spore germination
JC772_04285	COG1309	transcriptional regulator
JC772_04290	COG1956	GAF domain-containing protein
JC772_04295	COG0626	cystathionine gamma-synthase activity
JC772_04300	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
JC772_04335	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
JC772_04340	COG0454	-acetyltransferase
JC772_04345	COG0517	IMP dehydrogenase activity
JC772_04350	COG0123	including yeast histone deacetylase and acetoin utilization protein
JC772_04355	COG1970	mechanosensitive ion channel activity
JC772_04365	COG1609	Transcriptional regulator
JC772_04370	COG1605	Chorismate mutase
JC772_04370	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
JC772_04375	COG3118	belongs to the thioredoxin family
JC772_04385	COG2309	aminopeptidase activity
JC772_04400	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
JC772_04410	COG1674	ftsk spoiiie
JC772_04420	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
JC772_04425	COG4848	Belongs to the UPF0354 family
JC772_04430	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
JC772_04435	COG1986	Phosphatase that hydrolyzes non-canonical purine nucleotides such as XTP and ITP to their respective diphosphate derivatives. Probably excludes non-canonical purines from DNA precursor pool, thus preventing their incorporation into DNA and avoiding chromosomal lesions
JC772_04455	COG1363	Peptidase, m42
JC772_04465	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
JC772_04470	COG0220	tRNA (guanine-N7-)-methyltransferase activity
JC772_04480	COG0510	thiamine kinase activity
JC772_04485	COG1523	belongs to the glycosyl hydrolase 13 family
JC772_04495	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
JC772_04500	COG1349	DNA-binding transcription factor activity
JC772_04505	COG1187	pseudouridine synthase activity
JC772_04510	COG2244	polysaccharide biosynthetic process
JC772_04515	COG2081	HI0933 family
JC772_04520	COG2814	Major facilitator Superfamily
JC772_04530	COG3832	glyoxalase III activity
JC772_04550	COG1329	Transcriptional regulator
JC772_04560	COG2223	nitrite transmembrane transporter activity
JC772_04570	COG0314	molybdopterin synthase activity
JC772_04575	COG1763	Mo-molybdopterin cofactor biosynthetic process
JC772_04580	COG0303	'Molybdopterin
JC772_04585	COG0315	cyclic pyranopterin monophosphate synthase activity
JC772_04590	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
JC772_04595	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
JC772_04600	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
JC772_04605	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
JC772_04610	COG1140	nitrate reductase beta subunit
JC772_04615	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
JC772_04620	COG2181	nitrate reductase activity
JC772_04635	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
JC772_04645	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
JC772_04680	COG0495	leucyl-tRNA aminoacylation
JC772_04685	COG2814	Major facilitator Superfamily
JC772_04695	COG1136	(ABC) transporter
JC772_04700	COG0346	lactoylglutathione lyase activity
JC772_04715	COG1242	4 iron, 4 sulfur cluster binding
JC772_04720	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
JC772_04725	COG1121	(ABC) transporter
JC772_04735	COG1794	racemase activity, acting on amino acids and derivatives
JC772_04745	COG2378	regulation of single-species biofilm formation
JC772_04755	COG2267	carboxylic ester hydrolase activity
JC772_04760	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
JC772_04770	COG0746	molybdenum cofactor guanylyltransferase activity
JC772_04795	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
JC772_04800	COG1866	Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA
JC772_04850	COG0800	Aldolase
JC772_04855	COG2610	gluconate transmembrane transporter activity
JC772_04860	COG1312	Catalyzes the dehydration of D-mannonate
JC772_04865	COG0246	Mannitol dehydrogenase
JC772_04870	COG1414	Transcriptional regulator
JC772_04875	COG3409	Peptidoglycan-binding domain 1 protein
JC772_04875	COG5632	N-Acetylmuramoyl-L-alanine amidase
JC772_04885	COG1368	sulfuric ester hydrolase activity
JC772_04900	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
JC772_04905	COG1116	anion transmembrane transporter activity
JC772_04910	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
JC772_04925	COG0494	nUDIX hydrolase
JC772_04935	COG1854	S-ribosylhomocysteine lyase activity
JC772_04940	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
JC772_04945	COG0288	reversible hydration of carbon dioxide
JC772_04950	COG1271	oxidase subunit
JC772_04955	COG1294	oxidase, subunit
JC772_04985	COG1842	Phage shock protein A
JC772_05025	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
JC772_05030	COG1597	lipid kinase activity
JC772_05035	COG1136	(ABC) transporter
JC772_05045	COG0745	RESPONSE REGULATOR receiver
JC772_05050	COG2205	protein histidine kinase activity
JC772_05055	COG0577	efflux transmembrane transporter activity
JC772_05060	COG1136	(ABC) transporter
JC772_05065	COG0577	efflux transmembrane transporter activity
JC772_05080	COG4948	Mandelate Racemase Muconate Lactonizing
JC772_05085	COG0318	PFAM AMP-dependent synthetase and ligase
JC772_05090	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
JC772_05095	COG0596	Alpha beta hydrolase
JC772_05100	COG1165	Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
JC772_05105	COG1169	isochorismate synthase
JC772_05110	COG1575	Belongs to the MenA family. Type 1 subfamily
JC772_05115	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
JC772_05135	COG0058	SHG alpha-glucan phosphorylase activity
JC772_05140	COG0297	glycogen (starch) synthase activity
JC772_05145	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
JC772_05150	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
JC772_05155	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
JC772_05255	COG0544	peptidyl-prolyl cis-trans isomerase activity
JC772_05290	COG1285	pathogenesis
JC772_05295	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
JC772_05305	COG0166	Belongs to the GPI family
JC772_05310	COG2155	Conserved Protein
JC772_05315	COG1098	S1 RNA binding domain
JC772_05320	COG0436	Aminotransferase
JC772_05325	COG1522	sequence-specific DNA binding
JC772_05330	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
JC772_05335	COG2267	carboxylic ester hydrolase activity
JC772_05345	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
JC772_05350	COG2032	superoxide dismutase activity
JC772_05370	COG5018	Exonuclease
JC772_05375	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
JC772_05395	COG2050	protein possibly involved in aromatic compounds catabolism
JC772_05405	COG1268	BioY protein
JC772_05410	COG1210	Utp--glucose-1-phosphate uridylyltransferase
JC772_05415	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
JC772_05425	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
JC772_05435	COG3584	3D domain protein
JC772_05455	COG1252	NADH dehydrogenase
JC772_05460	COG0492	ferredoxin-NADP+ reductase activity
JC772_05475	COG1683	Conserved Protein
JC772_05510	COG1131	(ABC) transporter
JC772_05535	COG0316	Belongs to the HesB IscA family
JC772_05540	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
JC772_05545	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
JC772_05555	COG1252	NADH dehydrogenase
JC772_05560	COG2824	Alkylphosphonate utilization operon protein PhnA
JC772_05570	COG3655	Transcriptional regulator
JC772_05585	COG4837	Protein of unknown function (DUF1462)
JC772_05590	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
JC772_05595	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
JC772_05600	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
JC772_05610	COG0647	UMP catabolic process
JC772_05620	COG2445	Protein of unknown function DUF86
JC772_05625	COG1494	fructose-1,6-bisphosphatase
JC772_05635	COG4470	Protein conserved in bacteria
JC772_05645	COG0789	Transcriptional regulator
JC772_05650	COG4377	Putative membrane peptidase family (DUF2324)
JC772_05665	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
JC772_05670	COG0739	heme binding
JC772_05680	COG3377	Domain of unknown function (DUF1805)
JC772_05685	COG0737	Belongs to the 5'-nucleotidase family
JC772_05700	COG0719	Fe-S assembly protein
JC772_05705	COG0822	iron-sulfur transferase activity
JC772_05710	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
JC772_05715	COG0719	Fe-S assembly protein
JC772_05720	COG0396	ATPase activity
JC772_05725	COG1464	Belongs to the NlpA lipoprotein family
JC772_05730	COG2011	ABC-type metal ion transport system permease component
JC772_05745	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
JC772_05750	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
JC772_05755	COG0509	glycine decarboxylation via glycine cleavage system
JC772_05760	COG1393	Belongs to the ArsC family
JC772_05805	COG1960	acyl-CoA dehydrogenase activity
JC772_05810	COG0183	Belongs to the thiolase family
JC772_05815	COG1024	Enoyl-CoA hydratase
JC772_05815	COG1250	3-hydroxyacyl-CoA dehydrogenase
JC772_05825	COG1686	Belongs to the peptidase S11 family
JC772_05845	COG0011	TIGRFAM Protein of
JC772_05850	COG0840	transmembrane signaling receptor activity
JC772_05870	COG0531	amino acid
JC772_05875	COG0706	membrane insertase activity
JC772_05885	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
JC772_05895	COG0586	Pfam SNARE associated Golgi protein
JC772_05905	COG1376	ErfK ybiS ycfS ynhG family protein
JC772_05910	COG0745	RESPONSE REGULATOR receiver
JC772_05915	COG5002	protein histidine kinase activity
JC772_05920	COG0840	transmembrane signaling receptor activity
JC772_05925	COG0840	transmembrane signaling receptor activity
JC772_05930	COG2151	metal-sulfur cluster biosynthetic enzyme
JC772_05935	COG3227	Zinc metalloprotease (Elastase)
JC772_05940	COG1741	Belongs to the pirin family
JC772_05955	COG0783	Belongs to the Dps family
JC772_05960	COG1611	Belongs to the LOG family
JC772_05980	COG0803	Belongs to the bacterial solute-binding protein 9 family
JC772_05985	COG1108	ABC-type Mn2 Zn2 transport systems permease components
JC772_05990	COG1121	(ABC) transporter
JC772_06010	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
JC772_06015	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
JC772_06020	COG1115	amino acid carrier protein
JC772_06025	COG2910	NAD(P)H-binding
JC772_06040	COG1252	NADH dehydrogenase
JC772_06055	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
JC772_06070	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
JC772_06075	COG4977	sequence-specific DNA binding
JC772_06075	COG1917	Cupin 2, conserved barrel domain protein
JC772_06085	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
JC772_06105	COG0697	spore germination
JC772_06120	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
JC772_06125	COG0557	exoribonuclease II activity
JC772_06130	COG1647	Serine aminopeptidase, S33
JC772_06135	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
JC772_06140	COG1346	cytolysis
JC772_06150	COG0148	phosphopyruvate hydratase activity
JC772_06155	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
JC772_06160	COG0149	triose-phosphate isomerase activity
JC772_06165	COG0126	phosphoglycerate kinase activity
JC772_06170	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
JC772_06185	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
JC772_06230	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
JC772_06245	COG2323	membrane
JC772_06255	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
JC772_06260	COG1481	regulation of sporulation
JC772_06265	COG0391	Required for morphogenesis under gluconeogenic growth conditions
JC772_06270	COG1660	Displays ATPase and GTPase activities
JC772_06275	COG1051	belongs to the nudix hydrolase family
JC772_06285	COG0492	ferredoxin-NADP+ reductase activity
JC772_06290	COG0457	Tetratricopeptide repeat
JC772_06295	COG0110	maltose O-acetyltransferase activity
JC772_06305	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
JC772_06310	COG1493	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
JC772_06315	COG1950	PFAM Membrane protein of
JC772_06325	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
JC772_06340	COG0789	Transcriptional regulator
JC772_06365	COG0583	DNA-binding transcription factor activity
JC772_06380	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
JC772_06385	COG3409	Peptidoglycan-binding domain 1 protein
JC772_06385	COG0793	Belongs to the peptidase S41A family
JC772_06390	COG2177	Part of the ABC transporter FtsEX involved in
JC772_06395	COG2884	Cell division ATP-binding protein ftsE
JC772_06420	COG1278	Cold shock
JC772_06425	COG1040	competence protein
JC772_06430	COG4098	Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
JC772_06435	COG1388	LysM domain
JC772_06435	COG0791	NLP P60 protein
JC772_06440	COG1733	regulation of RNA biosynthetic process
JC772_06445	COG1307	EDD domain protein, DegV family
JC772_06450	COG1739	Uncharacterized protein family UPF0029
JC772_06455	COG1316	TRANSCRIPTIONal
JC772_06465	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
JC772_06475	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
JC772_06480	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
JC772_06490	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
JC772_06490	COG3933	PFAM sigma-54 factor interaction domain-containing protein
JC772_06505	COG1486	melibiose metabolic process
JC772_06510	COG1447	Phosphotransferase system cellobiose-specific component IIA
JC772_06525	COG1447	Phosphotransferase system cellobiose-specific component IIA
JC772_06530	COG1301	dicarboxylic acid transport
JC772_06535	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
JC772_06545	COG1271	oxidase subunit
JC772_06550	COG1294	oxidase, subunit
JC772_06555	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
JC772_06560	COG1620	l-lactate permease
JC772_06565	COG2389	metal-binding protein
JC772_06575	COG1368	sulfuric ester hydrolase activity
JC772_06585	COG1388	LysM domain
JC772_06585	COG0791	NLP P60 protein
JC772_06590	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
JC772_06600	COG1215	transferase activity, transferring glycosyl groups
JC772_06605	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
JC772_06610	COG1388	LysM domain
JC772_06610	COG3584	3D domain protein
JC772_06625	COG4715	Zinc finger, swim domain protein
JC772_06630	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
JC772_06670	COG0577	efflux transmembrane transporter activity
JC772_06675	COG1136	(ABC) transporter
JC772_06710	COG3850	Histidine kinase
JC772_06710	COG5002	protein histidine kinase activity
JC772_06715	COG0745	RESPONSE REGULATOR receiver
JC772_06725	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
JC772_06735	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
JC772_06735	COG1215	transferase activity, transferring glycosyl groups
JC772_06740	COG1134	teichoic acid transport
JC772_06745	COG1682	transport, permease protein
JC772_06750	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
JC772_06755	COG0463	Glycosyl transferase, family 2
JC772_06755	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
JC772_06760	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
JC772_06765	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
JC772_06780	COG1609	Transcriptional regulator
JC772_06790	COG0739	heme binding
JC772_06805	COG3279	Response regulator of the LytR AlgR family
JC772_06810	COG2385	sporulation resulting in formation of a cellular spore
JC772_06825	COG4836	Membrane
JC772_06830	COG1007	ATP synthesis coupled electron transport
JC772_06835	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
JC772_06840	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
JC772_06845	COG0713	ATP synthesis coupled electron transport
JC772_06850	COG0839	Belongs to the complex I subunit 6 family
JC772_06860	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
JC772_06865	COG0649	NAD binding
JC772_06870	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
JC772_06875	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
JC772_06880	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
JC772_06885	COG3300	MHYT domain
JC772_06885	COG5001	Diguanylate cyclase
JC772_06890	COG5001	Diguanylate cyclase
JC772_06890	COG3300	MHYT domain
JC772_06905	COG0355	proton-transporting ATP synthase activity, rotational mechanism
JC772_06910	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
JC772_06915	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
JC772_06920	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
JC772_06925	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
JC772_06930	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
JC772_06935	COG0636	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
JC772_06960	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
JC772_06965	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
JC772_06975	COG0698	ribose 5-phosphate isomerase
JC772_06995	COG2259	Doxx family
JC772_07000	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
JC772_07015	COG0009	L-threonylcarbamoyladenylate synthase
JC772_07030	COG2890	protein-(glutamine-N5) methyltransferase activity
JC772_07035	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
JC772_07040	COG1435	thymidine kinase activity
JC772_07050	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
JC772_07055	COG1494	fructose-1,6-bisphosphatase
JC772_07075	COG4821	SIS domain
JC772_07080	COG0504	CTP synthase activity
JC772_07095	COG1960	acyl-CoA dehydrogenase activity
JC772_07100	COG1960	acyl-CoA dehydrogenase activity
JC772_07105	COG1250	3-hydroxyacyl-CoA dehydrogenase
JC772_07110	COG0183	Belongs to the thiolase family
JC772_07115	COG2181	nitrate reductase activity
JC772_07115	COG0247	lactate metabolic process
JC772_07120	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
JC772_07135	COG2197	response regulator
JC772_07140	COG4585	Histidine kinase
JC772_07145	COG0842	Transport permease protein
JC772_07150	COG1131	(ABC) transporter
JC772_07155	COG0024	Methionine aminopeptidase
JC772_07160	COG2234	aminopeptidase activity
JC772_07175	COG4506	Protein conserved in bacteria
JC772_07180	COG1619	proteins homologs of microcin C7 resistance protein MccF
JC772_07195	COG0010	Belongs to the arginase family
JC772_07200	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
JC772_07205	COG2814	Major facilitator Superfamily
JC772_07210	COG0789	Transcriptional regulator
JC772_07215	COG0584	glycerophosphoryl diester phosphodiesterase
JC772_07220	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
JC772_07230	COG1994	Peptidase M50
JC772_07240	COG1078	dGTPase activity
JC772_07245	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
JC772_07250	COG1120	ATPase activity
JC772_07255	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JC772_07260	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JC772_07265	COG4844	belongs to the
JC772_07280	COG0280	phosphate acetyltransferase
JC772_07285	COG3253	May function as heme-dependent peroxidase
JC772_07295	COG3773	Cell wall hydrolase
JC772_07305	COG2363	Small membrane protein
JC772_07315	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
JC772_07320	COG2233	PERMEase
JC772_07325	COG0561	phosphatase activity
JC772_07330	COG2814	Major facilitator Superfamily
JC772_07335	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
JC772_07340	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
JC772_07345	COG1131	(ABC) transporter
JC772_07350	COG2755	lipolytic protein G-D-S-L family
JC772_07355	COG0460	homoserine dehydrogenase
JC772_07360	COG1897	L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine
JC772_07365	COG2873	o-acetylhomoserine
JC772_07375	COG0351	phosphomethylpyrimidine kinase
JC772_07385	COG1966	Carbon starvation protein
JC772_07390	COG3279	Response regulator of the LytR AlgR family
JC772_07395	COG0477	Major facilitator Superfamily
JC772_07400	COG1922	lipopolysaccharide N-acetylmannosaminouronosyltransferase activity
JC772_07405	COG0438	transferase activity, transferring glycosyl groups
JC772_07420	COG0840	transmembrane signaling receptor activity
JC772_07435	COG1607	acyl-coa hydrolase
JC772_07440	COG1216	Glycosyl transferase, family 2
JC772_07455	COG0463	Glycosyl transferase, family 2
JC772_07470	COG0463	Glycosyl transferase, family 2
JC772_07475	COG0488	(ABC) transporter
JC772_07480	COG1309	transcriptional regulator
JC772_07485	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
JC772_07490	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
JC772_07490	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
JC772_07495	COG0628	permease
JC772_07500	COG1346	cytolysis
JC772_07510	COG3279	Response regulator of the LytR AlgR family
JC772_07515	COG3275	phosphorelay sensor kinase activity
JC772_07520	COG2814	Major facilitator Superfamily
JC772_07525	COG4362	Belongs to the NOS family. Bacterial NOS oxygenase subfamily
JC772_07530	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
JC772_07540	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
JC772_07545	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
JC772_07545	COG3711	transcriptional antiterminator
JC772_07600	COG0582	viral genome integration into host DNA
JC772_07615	COG1132	(ABC) transporter
JC772_07625	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
JC772_07635	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
JC772_07640	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
JC772_07645	COG4853	Protein conserved in bacteria
JC772_07655	COG5002	protein histidine kinase activity
JC772_07660	COG0745	RESPONSE REGULATOR receiver
JC772_07685	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
JC772_07690	COG0305	Participates in initiation and elongation during chromosome replication
JC772_07695	COG0359	binds to the 23S rRNA
JC772_07700	COG3887	signaling protein consisting of a modified GGDEF domain and a DHH domain
JC772_07705	COG4241	membrane
JC772_07710	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
JC772_07720	COG0360	Binds together with S18 to 16S ribosomal RNA
JC772_07725	COG0012	GTP binding
JC772_07730	COG4481	Protein conserved in bacteria
JC772_07735	COG0668	transmembrane transport
JC772_07745	COG1475	DNA binding
JC772_07750	COG1192	Involved in chromosome partitioning
JC772_07755	COG1475	DNA binding
JC772_07760	COG0357	Ribosomal RNA small subunit methyltransferase G
JC772_07765	COG0445	tRNA wobble uridine modification
JC772_07770	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
JC772_07775	COG1847	R3H domain protein
JC772_07780	COG0706	membrane insertase activity
JC772_07785	COG0594	ribonuclease P activity
JC772_07790	COG0230	Belongs to the bacterial ribosomal protein bL34 family
JC772_07795	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
JC772_07800	COG0592	DNA-directed DNA polymerase activity
JC772_07805	COG2501	S4 domain
JC772_07810	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
JC772_07815	COG0187	DNA topoisomerase II activity
JC772_07820	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
JC772_07855	COG0516	GMP reductase activity
JC772_07855	COG0517	IMP dehydrogenase activity
JC772_07860	COG1686	Belongs to the peptidase S11 family
JC772_07865	COG0214	Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively
JC772_07870	COG0311	Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS
JC772_07875	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
JC772_07890	COG1428	Deoxynucleoside kinase
JC772_07895	COG1428	Deoxynucleoside kinase
JC772_07900	COG1335	isochorismatase
JC772_07905	COG0590	tRNA wobble adenosine to inosine editing
JC772_07915	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
JC772_07920	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
JC772_07925	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
JC772_07970	COG1982	Orn Lys Arg decarboxylase major
JC772_07975	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
JC772_07980	COG0470	DNA polymerase III
JC772_07985	COG1774	PSP1 C-terminal conserved region
JC772_07990	COG4467	Involved in initiation control of chromosome replication
JC772_07995	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
JC772_08005	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
JC772_08010	COG2002	toxin-antitoxin pair type II binding
JC772_08020	COG0084	hydrolase, TatD family'
JC772_08030	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
JC772_08040	COG4466	Protein conserved in bacteria
JC772_08050	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
JC772_08055	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
JC772_08060	COG0251	oxidation-reduction process
JC772_08065	COG2088	sporulation resulting in formation of a cellular spore
JC772_08070	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
JC772_08080	COG0193	aminoacyl-tRNA hydrolase activity
JC772_08090	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
JC772_08095	COG2002	toxin-antitoxin pair type II binding
JC772_08100	COG2244	polysaccharide biosynthetic process
JC772_08105	COG3956	TIGRFAM MazG family protein
JC772_08110	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
JC772_08130	COG1098	S1 RNA binding domain
JC772_08145	COG2208	phosphoserine phosphatase activity
JC772_08155	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
JC772_08160	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
JC772_08165	COG1521	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
JC772_08170	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
JC772_08175	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
JC772_08180	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
JC772_08185	COG0512	Glutamine amidotransferase of anthranilate synthase
JC772_08190	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
JC772_08195	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
JC772_08200	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
JC772_08205	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
JC772_08210	COG1396	sequence-specific DNA binding
JC772_08215	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
JC772_08220	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
JC772_08260	COG0544	peptidyl-prolyl cis-trans isomerase activity
JC772_08310	COG3880	PFAM UvrB UvrC protein
JC772_08315	COG3869	Catalyzes the specific phosphorylation of arginine residues in
JC772_08320	COG0542	response to heat
JC772_08325	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
JC772_08335	COG4956	integral membrane protein (PIN domain superfamily)
JC772_08340	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
JC772_08345	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
JC772_08350	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
JC772_08355	COG1045	serine acetyltransferase
JC772_08360	COG0215	cysteine-tRNA ligase activity
JC772_08370	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
JC772_08375	COG3688	RNA-binding protein containing a PIN domain
JC772_08385	COG0267	Belongs to the bacterial ribosomal protein bL33 family
JC772_08395	COG0250	Participates in transcription elongation, termination and antitermination
JC772_08400	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
JC772_08405	COG0081	regulation of translation
JC772_08410	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
JC772_08415	COG0222	ribosome binding
JC772_08420	COG2813	Specifically methylates the guanine in position
JC772_08430	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
JC772_08435	COG1358	cellular component organization or biogenesis
JC772_08440	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
JC772_08445	COG0049	tRNA binding
JC772_08450	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
JC772_08455	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
JC772_08465	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
JC772_08470	COG0088	Forms part of the polypeptide exit tunnel
JC772_08475	COG0089	rRNA binding
JC772_08480	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
JC772_08485	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
JC772_08490	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
JC772_08495	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
JC772_08500	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
JC772_08505	COG0255	Belongs to the universal ribosomal protein uL29 family
JC772_08510	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
JC772_08515	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
JC772_08520	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
JC772_08525	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
JC772_08535	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
JC772_08545	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
JC772_08550	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
JC772_08555	COG1841	ribosomal large subunit assembly
JC772_08560	COG0200	Binds to the 23S rRNA
JC772_08565	COG0201	protein transport
JC772_08570	COG0563	adenylate kinase activity
JC772_08575	COG0024	Methionine aminopeptidase
JC772_08585	COG0257	Belongs to the bacterial ribosomal protein bL36 family
JC772_08590	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
JC772_08595	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
JC772_08600	COG0202	RNA polymerase activity
JC772_08620	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
JC772_08630	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
JC772_08635	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
JC772_08645	COG0860	N-Acetylmuramoyl-L-alanine amidase
JC772_08650	COG0489	protein tyrosine kinase activity
JC772_08660	COG2194	sulfuric ester hydrolase activity
JC772_08665	COG0726	polysaccharide deacetylase
JC772_08745	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
JC772_08755	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
JC772_08785	COG1396	sequence-specific DNA binding
JC772_08790	COG0602	queuosine metabolic process
JC772_08890	COG3681	Belongs to the UPF0597 family
JC772_08895	COG3681	Belongs to the UPF0597 family
JC772_08925	COG2814	Major facilitator Superfamily
JC772_08935	COG0601	transmembrane transport
JC772_08940	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
JC772_08945	COG0444	Belongs to the ABC transporter superfamily
JC772_08950	COG4608	Belongs to the ABC transporter superfamily
JC772_08955	COG4166	transmembrane transport
JC772_08965	COG2207	Transcriptional regulator
JC772_08975	COG1309	transcriptional regulator
JC772_08985	COG0656	L-ascorbic acid biosynthetic process
JC772_08990	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
JC772_09000	COG4149	molybdate abc transporter
JC772_09005	COG0725	ABC transporter, periplasmic molybdate-binding protein
JC772_09010	COG1910	domain protein
JC772_09015	COG0204	Acyl-transferase
JC772_09020	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
JC772_09025	COG1648	precorrin-2 dehydrogenase activity
JC772_09025	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
JC772_09035	COG1587	Uroporphyrinogen-III synthase
JC772_09035	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
JC772_09040	COG2146	nitrite reductase [NAD(P)H] activity
JC772_09045	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
JC772_09070	COG4585	Histidine kinase
JC772_09075	COG2197	response regulator
JC772_09080	COG1131	(ABC) transporter
JC772_09085	COG0842	Transport permease protein
JC772_09085	COG1511	domain protein
JC772_09090	COG0842	Transport permease protein
JC772_09100	COG0747	negative chemotaxis
JC772_09105	COG0601	transmembrane transport
JC772_09110	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
JC772_09115	COG0444	Belongs to the ABC transporter superfamily
JC772_09120	COG4608	Belongs to the ABC transporter superfamily
JC772_09125	COG0561	phosphatase activity
JC772_09145	COG3185	4-Hydroxyphenylpyruvate dioxygenase
JC772_09150	COG0179	Fumarylacetoacetate (FAA) hydrolase
JC772_09160	COG2814	Major facilitator Superfamily
JC772_09165	COG1181	Belongs to the D-alanine--D-alanine ligase family
JC772_09170	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
JC772_09180	COG0457	Tetratricopeptide repeat
JC772_09180	COG0705	Rhomboid family
JC772_09185	COG0736	holo-[acyl-carrier-protein] synthase activity
JC772_09190	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
JC772_09200	COG0864	Transcriptional regulator
JC772_09205	COG2337	Toxic component of a toxin-antitoxin (TA) module
JC772_09210	COG2183	response to ionizing radiation
JC772_09220	COG3091	SprT-like family
JC772_09260	COG0544	peptidyl-prolyl cis-trans isomerase activity
JC772_09310	COG0802	atpase or kinase
JC772_09315	COG1214	PFAM Peptidase M22, glycoprotease
JC772_09320	COG0456	acetyltransferase
JC772_09330	COG0488	(ABC) transporter
JC772_09335	COG2344	Modulates transcription in response to changes in cellular NADH NAD( ) redox state
JC772_09345	COG1266	CAAX protease self-immunity
JC772_09350	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
JC772_09355	COG0459	protein refolding
JC772_09360	COG0518	GMP synthase (glutamine-hydrolyzing) activity
JC772_09360	COG0519	Catalyzes the synthesis of GMP from XMP
JC772_09365	COG2252	PERMEase
JC772_09375	COG5002	protein histidine kinase activity
JC772_09440	COG2205	protein histidine kinase activity
JC772_09445	COG0745	RESPONSE REGULATOR receiver
JC772_09465	COG0697	spore germination
JC772_09485	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
JC772_09490	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
JC772_09495	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
JC772_09500	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
JC772_09505	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
JC772_09510	COG0047	phosphoribosylformylglycinamidine synthase activity
JC772_09515	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
JC772_09520	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
JC772_09525	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
JC772_09530	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
JC772_09535	COG0138	bifunctional purine biosynthesis protein purh
JC772_09540	COG0151	Belongs to the GarS family
JC772_09550	COG0583	DNA-binding transcription factor activity
JC772_09570	COG1646	35 carbon atoms) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P), producing heptaprenylglyceryl phosphate (HepGP). This reaction is an ether-bond-formation step in the biosynthesis of archaea-type G1P-based membrane lipids found in Bacillales
JC772_09575	COG0210	DNA helicase
JC772_09580	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
JC772_09585	COG4851	CamS sex pheromone cAM373 precursor
JC772_09595	COG1012	belongs to the aldehyde dehydrogenase family
JC772_09600	COG1335	isochorismatase
JC772_09610	COG2011	ABC-type metal ion transport system permease component
JC772_09615	COG1464	Belongs to the NlpA lipoprotein family
JC772_09630	COG4682	membrane
JC772_09635	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
JC772_09640	COG0154	amidase activity
JC772_09645	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
JC772_09650	COG1597	lipid kinase activity
JC772_09655	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
JC772_09660	COG0546	phosphoglycolate phosphatase activity
JC772_09665	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
JC772_09675	COG0531	amino acid
JC772_09680	COG1012	belongs to the aldehyde dehydrogenase family
JC772_09685	COG2076	Multidrug Resistance protein
JC772_09690	COG2309	aminopeptidase activity
JC772_09700	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
JC772_09705	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
JC772_09710	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
JC772_09725	COG0450	alkyl hydroperoxide reductase
JC772_09750	COG0714	Associated with various cellular activities
JC772_09790	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JC772_09795	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JC772_09800	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
JC772_09805	COG0492	ferredoxin-NADP+ reductase activity
JC772_09815	COG0166	Belongs to the GPI family
JC772_09820	COG5002	protein histidine kinase activity
JC772_09850	COG3541	Predicted nucleotidyltransferase
JC772_09855	COG2814	Major facilitator Superfamily
JC772_09860	COG0723	plastoquinol--plastocyanin reductase activity
JC772_09860	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
JC772_09870	COG0765	amino acid transport
JC772_09875	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
JC772_09885	COG0840	transmembrane signaling receptor activity
JC772_09900	COG2235	arginine
JC772_09915	COG0549	Belongs to the carbamate kinase family
JC772_09920	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
JC772_09930	COG0366	Alpha amylase catalytic
JC772_09935	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
JC772_09935	COG1263	PTS System
JC772_09935	COG2190	(PTS) system
JC772_09955	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JC772_09960	COG4605	iron ion homeostasis
JC772_09965	COG4604	ABC transporter, ATP-binding protein
JC772_09970	COG4607	ABC-type enterochelin transport system periplasmic component
JC772_09975	COG2145	Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
JC772_09980	COG0352	thiamine-phosphate diphosphorylase activity
JC772_09990	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
JC772_10010	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
JC772_10020	COG1116	anion transmembrane transporter activity
JC772_10100	COG2963	transposase activity
JC772_10105	COG2801	Transposase and inactivated derivatives
JC772_10110	COG2270	Major facilitator Superfamily
JC772_10135	COG2310	stress, protein
JC772_10140	COG2310	stress, protein
JC772_10145	COG2310	stress, protein
JC772_10150	COG0861	Integral membrane protein TerC family
JC772_10160	COG3853	Toxic anion resistance protein (TelA)
JC772_10170	COG4840	Belongs to the UPF0435 family
JC772_10175	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
JC772_10185	COG1295	ribonuclease BN
JC772_10190	COG2217	Heavy metal translocating P-type atpase
JC772_10195	COG0697	spore germination
JC772_10205	COG0681	Belongs to the peptidase S26 family
JC772_10215	COG0586	Pfam SNARE associated Golgi protein
JC772_10230	COG0387	Pfam Sodium calcium exchanger
JC772_10240	COG0535	radical SAM domain protein
JC772_10260	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
JC772_10285	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
JC772_10310	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
JC772_10340	COG2066	Belongs to the glutaminase family
JC772_10345	COG1263	PTS System
JC772_10345	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
JC772_10350	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
JC772_10360	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
JC772_10360	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
JC772_10370	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
JC772_10375	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
JC772_10390	COG0402	S-adenosylhomocysteine deaminase activity
JC772_10395	COG2137	regulation of response to DNA damage stimulus
JC772_10420	COG1988	membrane-bound metal-dependent
JC772_10425	COG1194	a g-specific adenine glycosylase
JC772_10430	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
JC772_10450	COG3557	Belongs to the UPF0374 family
JC772_10455	COG1132	(ABC) transporter
JC772_10460	COG4129	membrane
JC772_10465	COG0067	glutamate synthase
JC772_10465	COG0069	glutamate synthase activity
JC772_10465	COG0070	glutamate synthase
JC772_10470	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
JC772_10475	COG4555	ABC transporter
JC772_10495	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
JC772_10500	COG0735	belongs to the Fur family
JC772_10600	COG3157	Type VI secretion system effector, Hcp
JC772_10620	COG0457	Tetratricopeptide repeat
JC772_10625	COG0217	transcriptional regulatory protein
JC772_10630	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
JC772_10635	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
JC772_10655	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
JC772_10660	COG2766	serine protein kinase
JC772_10665	COG2718	Belongs to the UPF0229 family
JC772_10680	COG1280	lysine exporter protein (LysE YggA)
JC772_10725	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
JC772_10735	COG1585	Membrane protein implicated in regulation of membrane protease activity
JC772_10740	COG2268	Band 7 protein
JC772_10775	COG4990	cell redox homeostasis
JC772_10785	COG3290	protein histidine kinase activity
JC772_10790	COG4565	transcriptional regulatory protein
JC772_10795	COG3493	citrate carrier protein
JC772_10800	COG0281	malic enzyme
JC772_10815	COG5002	protein histidine kinase activity
JC772_10820	COG0745	RESPONSE REGULATOR receiver
JC772_10825	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
JC772_10830	COG3383	formate dehydrogenase (NAD+) activity
JC772_10835	COG2427	Protein of unknown function (DUF1641)
JC772_10845	COG0840	transmembrane signaling receptor activity
JC772_10855	COG0531	amino acid
JC772_10865	COG0640	Transcriptional regulator
JC772_10870	COG2217	Heavy metal translocating P-type atpase
JC772_10875	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
JC772_10890	COG3227	Zinc metalloprotease (Elastase)
JC772_10905	COG2217	Heavy metal translocating P-type atpase
JC772_10925	COG2720	vancomycin resistance protein
JC772_10930	COG1316	TRANSCRIPTIONal
JC772_10940	COG1253	flavin adenine dinucleotide binding
JC772_10945	COG1027	Aspartate ammonia-lyase
JC772_10950	COG1620	l-lactate permease
JC772_10965	COG3104	oligopeptide transport
JC772_10970	COG0156	8-amino-7-oxononanoate synthase activity
JC772_10975	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
JC772_10985	COG4548	von Willebrand factor, type A
JC772_10990	COG0714	Associated with various cellular activities
JC772_10995	COG0531	amino acid
JC772_11000	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
JC772_11005	COG1115	amino acid carrier protein
JC772_11010	COG1126	abc transporter atp-binding protein
JC772_11015	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
JC772_11020	COG0765	amino acid transport
JC772_11025	COG0765	amino acid transport
JC772_11030	COG0833	amino acid
JC772_11040	COG5002	protein histidine kinase activity
JC772_11055	COG0659	secondary active sulfate transmembrane transporter activity
JC772_11060	COG0589	response to stress
JC772_11070	COG0747	negative chemotaxis
JC772_11080	COG0601	transmembrane transport
JC772_11085	COG4608	Belongs to the ABC transporter superfamily
JC772_11095	COG2271	Major facilitator Superfamily
JC772_11100	COG1846	Transcriptional regulator
JC772_11105	COG0477	Major facilitator Superfamily
JC772_11110	COG1609	Transcriptional regulator
JC772_11115	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
JC772_11120	COG1869	D-ribose catabolic process
JC772_11130	COG1172	Belongs to the binding-protein-dependent transport system permease family
JC772_11135	COG1879	ABC-type sugar transport system periplasmic component
JC772_11140	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
JC772_11180	COG3568	Endonuclease Exonuclease Phosphatase
JC772_11205	COG0840	transmembrane signaling receptor activity
JC772_11210	COG3584	3D domain protein
JC772_11210	COG1388	LysM domain
JC772_11215	COG1476	TRANSCRIPTIONal
JC772_11250	COG1114	Component of the transport system for branched-chain amino acids
JC772_11260	COG1113	amino acid transport
JC772_11265	COG2153	protein acetylation
JC772_11275	COG0475	glutathione-regulated potassium exporter activity
JC772_11275	COG0569	domain protein
JC772_11290	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
JC772_11295	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
JC772_11300	COG0833	amino acid
JC772_11305	COG4990	cell redox homeostasis
JC772_11320	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
JC772_11325	COG0697	spore germination
JC772_11330	COG0531	amino acid
JC772_11345	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
JC772_11350	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
JC772_11355	COG1918	ferrous iron import across plasma membrane
JC772_11355	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
JC772_11360	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
JC772_11365	COG0573	inorganic phosphate transmembrane transporter activity
JC772_11370	COG0581	inorganic phosphate transmembrane transporter activity
JC772_11375	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
JC772_11415	COG0544	peptidyl-prolyl cis-trans isomerase activity
JC772_11500	COG2905	signal-transduction protein containing cAMP-binding and CBS domains
JC772_11530	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
JC772_11535	COG1116	anion transmembrane transporter activity
JC772_11540	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
JC772_11545	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
JC772_11550	COG0352	thiamine-phosphate diphosphorylase activity
JC772_11555	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
JC772_11560	COG2104	thiamine diphosphate biosynthetic process
JC772_11565	COG2022	thiamine diphosphate biosynthetic process
JC772_11570	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
JC772_11575	COG0351	phosphomethylpyrimidine kinase
JC772_11605	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
JC772_11610	COG2156	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex
JC772_11615	COG2205	protein histidine kinase activity
JC772_11625	COG4974	Belongs to the 'phage' integrase family
JC772_11635	COG2816	NAD+ diphosphatase activity
JC772_11645	COG0735	belongs to the Fur family
JC772_11670	COG1846	Transcriptional regulator
JC772_11680	COG2252	PERMEase
JC772_11685	COG1028	Short-chain dehydrogenase reductase Sdr
JC772_11690	COG1376	ErfK ybiS ycfS ynhG family protein
JC772_11745	COG0778	Nitroreductase
JC772_11755	COG2719	SpoVR family
JC772_11765	COG1316	TRANSCRIPTIONal
JC772_11770	COG1283	sodium-dependent phosphate transmembrane transporter activity
JC772_11785	COG0577	efflux transmembrane transporter activity
JC772_11790	COG1136	(ABC) transporter
JC772_11800	COG1114	Component of the transport system for branched-chain amino acids
JC772_11805	COG3546	catalase activity
JC772_11860	COG0475	glutathione-regulated potassium exporter activity
JC772_11865	COG1737	Transcriptional regulator
JC772_11875	COG2103	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
JC772_11880	COG1263	PTS System
JC772_11880	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
JC772_11915	COG1522	sequence-specific DNA binding
JC772_11930	COG0531	amino acid
JC772_11940	COG1012	belongs to the aldehyde dehydrogenase family
JC772_11945	COG1132	(ABC) transporter
JC772_11950	COG1132	(ABC) transporter
JC772_11955	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
JC772_11960	COG0765	amino acid transport
JC772_11965	COG1126	abc transporter atp-binding protein
JC772_11980	COG0189	ligase activity
JC772_11985	COG4399	Belongs to the UPF0754 family
JC772_11990	COG3679	Belongs to the UPF0342 family
JC772_11995	COG4585	Histidine kinase
JC772_12000	COG2197	response regulator
JC772_12060	COG2094	Belongs to the DNA glycosylase MPG family
JC772_12065	COG0561	phosphatase activity
JC772_12075	COG0635	Involved in the biosynthesis of porphyrin-containing compound
JC772_12080	COG0318	PFAM AMP-dependent synthetase and ligase
JC772_12105	COG2244	polysaccharide biosynthetic process
JC772_12115	COG0860	N-Acetylmuramoyl-L-alanine amidase
JC772_12135	COG1696	Membrane protein involved in D-alanine export
JC772_12150	COG1024	Enoyl-CoA hydratase
JC772_12160	COG1363	Peptidase, m42
JC772_12175	COG2239	Acts as a magnesium transporter
JC772_12180	COG0772	Belongs to the SEDS family
JC772_12185	COG1115	amino acid carrier protein
JC772_12290	COG1476	TRANSCRIPTIONal
JC772_12330	COG1131	(ABC) transporter
JC772_12375	COG0494	nUDIX hydrolase
JC772_12390	COG1061	Type III restriction enzyme res subunit
JC772_12400	COG3829	transcription factor binding
JC772_12405	COG4638	Rieske (2fe-2S)
JC772_12410	COG1012	belongs to the aldehyde dehydrogenase family
JC772_12415	COG0473	3-isopropylmalate dehydrogenase activity
JC772_12425	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
JC772_12435	COG1064	alcohol dehydrogenase
JC772_12450	COG3246	L-lysine catabolic process to acetate
JC772_12495	COG4641	Protein conserved in bacteria
JC772_12510	COG3711	transcriptional antiterminator
JC772_12515	COG1263	PTS System
JC772_12515	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
JC772_12515	COG2190	(PTS) system
JC772_12520	COG2723	6-phospho-beta-galactosidase activity
JC772_12530	COG2376	Dihydroxyacetone kinase
JC772_12560	COG0420	3'-5' exonuclease activity
JC772_12565	COG4717	serine-type aminopeptidase activity
JC772_12570	COG3481	metal-dependent phosphohydrolase, HD sub domain
JC772_12575	COG0577	efflux transmembrane transporter activity
JC772_12580	COG1136	(ABC) transporter
JC772_12585	COG5002	protein histidine kinase activity
JC772_12590	COG0745	RESPONSE REGULATOR receiver
JC772_12600	COG1316	TRANSCRIPTIONal
JC772_12610	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
JC772_12615	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
JC772_12620	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
JC772_12625	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
JC772_12645	COG1846	Transcriptional regulator
JC772_12650	COG4980	gas vesicle protein
JC772_12655	COG0537	adenosine 5'-monophosphoramidase activity
JC772_12660	COG1131	(ABC) transporter
JC772_12665	COG4473	ABC transporter
JC772_12685	COG3402	PFAM membrane-flanked domain
JC772_12695	COG2329	Antibiotic biosynthesis monooxygenase
JC772_12700	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
JC772_12705	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
JC772_12710	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
JC772_12715	COG1232	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
JC772_12745	COG1309	transcriptional regulator
JC772_12755	COG0438	transferase activity, transferring glycosyl groups
JC772_12755	COG1216	Glycosyl transferase, family 2
JC772_12765	COG1609	Transcriptional regulator
JC772_12775	COG1234	tRNA 3'-trailer cleavage
JC772_12780	COG0095	Lipoate-protein ligase
JC772_12785	COG0318	PFAM AMP-dependent synthetase and ligase
JC772_12800	COG2205	protein histidine kinase activity
JC772_12805	COG0745	RESPONSE REGULATOR receiver
JC772_12825	COG0501	Belongs to the peptidase M48B family
JC772_12830	COG0840	transmembrane signaling receptor activity
JC772_12835	COG0697	spore germination
JC772_12850	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
JC772_12855	COG2224	Isocitrate lyase
JC772_12860	COG1278	Cold shock
JC772_12865	COG4903	ComK protein
JC772_12870	COG0398	Pfam SNARE associated Golgi protein
JC772_12880	COG3857	The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination
JC772_12885	COG1074	ATP-dependent DNA helicase activity
JC772_12925	COG0179	Fumarylacetoacetate (FAA) hydrolase
JC772_12945	COG0367	asparagine synthase
JC772_12955	COG0753	catalase activity
JC772_12960	COG1874	Beta-galactosidase
JC772_12960	COG0366	Alpha amylase catalytic
JC772_12965	COG1666	GTP binding
JC772_12970	COG2996	Protein conserved in bacteria
JC772_12985	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
JC772_13000	COG0561	phosphatase activity
JC772_13020	COG2267	carboxylic ester hydrolase activity
JC772_13035	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
JC772_13040	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
JC772_13045	COG5504	Zn-dependent protease
JC772_13055	COG0180	Tryptophanyl-tRNA synthetase
JC772_13065	COG4166	transmembrane transport
JC772_13070	COG0601	transmembrane transport
JC772_13075	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
JC772_13080	COG0444	Belongs to the ABC transporter superfamily
JC772_13085	COG4608	Belongs to the ABC transporter superfamily
JC772_13090	COG0534	Mate efflux family protein
JC772_13095	COG4166	transmembrane transport
JC772_13110	COG0861	Integral membrane protein TerC family
JC772_13130	COG1164	Oligoendopeptidase f
JC772_13140	COG2346	COG2346, Truncated hemoglobins
JC772_13145	COG4116	CYTH
JC772_13155	COG2357	RelA SpoT domain protein
JC772_13165	COG0564	pseudouridine synthase activity
JC772_13175	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
JC772_13180	COG0772	Belongs to the SEDS family
JC772_13225	COG1216	Glycosyl transferase, family 2
JC772_13245	COG0457	Tetratricopeptide repeat
JC772_13245	COG0463	Glycosyl transferase, family 2
JC772_13265	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
JC772_13280	COG1091	dTDP-4-dehydrorhamnose reductase activity
JC772_13305	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
JC772_13310	COG2382	esterase
JC772_13325	COG5492	domain, Protein
JC772_13330	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
JC772_13340	COG1620	l-lactate permease
JC772_13345	COG5634	Uncharacterized conserved protein (DUF2278)
JC772_13385	COG0508	dehydrogenase complex catalyzes the overall conversion of
JC772_13390	COG0567	Dehydrogenase, E1 component
JC772_13400	COG0583	DNA-binding transcription factor activity
JC772_13405	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
JC772_13410	COG1012	belongs to the aldehyde dehydrogenase family
JC772_13425	COG0196	riboflavin kinase activity
JC772_13430	COG3162	membrane
JC772_13435	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
JC772_13440	COG0179	Fumarylacetoacetate (FAA) hydrolase
JC772_13455	COG0457	Tetratricopeptide repeat
JC772_13525	COG0673	inositol 2-dehydrogenase activity
JC772_13555	COG0457	Tetratricopeptide repeat
JC772_13560	COG0582	viral genome integration into host DNA
JC772_13610	COG0582	viral genome integration into host DNA
JC772_13635	COG1686	Belongs to the peptidase S11 family
JC772_13640	COG0681	Belongs to the peptidase S26 family
JC772_13675	COG1012	belongs to the aldehyde dehydrogenase family
JC772_13685	COG1176	ABC-type spermidine putrescine transport system, permease component I
JC772_13690	COG1177	transmembrane transport
JC772_13695	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
JC772_13700	COG0671	phosphoesterase, PA-phosphatase related
JC772_13705	COG2409	Drug exporters of the RND superfamily
JC772_13715	COG0564	pseudouridine synthase activity
JC772_13725	COG2340	Cysteine-rich secretory protein family
JC772_13730	COG0247	lactate metabolic process
JC772_13735	COG0277	FAD linked oxidase domain protein
JC772_13740	COG3835	regulator
JC772_13750	COG0745	RESPONSE REGULATOR receiver
JC772_13755	COG5002	protein histidine kinase activity
JC772_13760	COG2186	Transcriptional regulator
JC772_13765	COG0247	lactate metabolic process
JC772_13770	COG1139	Iron-sulfur cluster binding protein
JC772_13775	COG1556	Lactate utilization protein
JC772_13780	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
JC772_13785	COG0584	glycerophosphoryl diester phosphodiesterase
JC772_13795	COG2267	carboxylic ester hydrolase activity
JC772_13800	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
JC772_13825	COG2116	formate transmembrane transporter activity
JC772_13830	COG0861	Integral membrane protein TerC family
JC772_13835	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
JC772_13845	COG2030	dehydratase
JC772_13865	COG1028	Short-chain dehydrogenase reductase Sdr
JC772_13870	COG3243	poly(R)-hydroxyalkanoic acid synthase
JC772_13875	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
JC772_13890	COG1840	ABC-type Fe3 transport system, periplasmic component
JC772_13895	COG3842	ATPase activity
JC772_13905	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
JC772_13910	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
JC772_13915	COG1349	DNA-binding transcription factor activity
JC772_13920	COG0235	Class ii aldolase
JC772_13930	COG2861	carbohydrate metabolic process
JC772_13940	COG3852	Histidine kinase
JC772_13945	COG1846	Transcriptional regulator
JC772_13960	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
JC772_13965	COG0720	synthase
JC772_13975	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
JC772_13980	COG4873	Protein conserved in bacteria
JC772_13990	COG0456	acetyltransferase
JC772_14005	COG1780	Probably involved in ribonucleotide reductase function
JC772_14020	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
JC772_14025	COG1725	Transcriptional regulator
JC772_14030	COG1131	(ABC) transporter
JC772_14040	COG1131	(ABC) transporter
JC772_14045	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
JC772_14060	COG1522	sequence-specific DNA binding
JC772_14075	COG1619	proteins homologs of microcin C7 resistance protein MccF
JC772_14080	COG2070	2-Nitropropane dioxygenase
JC772_14085	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
JC772_14095	COG1696	Membrane protein involved in D-alanine export
JC772_14100	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
JC772_14115	COG0716	FMN binding
JC772_14140	COG1368	sulfuric ester hydrolase activity
JC772_14150	COG3173	Aminoglycoside phosphotransferase
JC772_14160	COG5609	conserved protein (DUF2294)
JC772_14165	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
JC772_14170	COG3002	Belongs to the UPF0753 family
JC772_14175	COG0288	reversible hydration of carbon dioxide
JC772_14180	COG0534	Mate efflux family protein
JC772_14195	COG1846	Transcriptional regulator
JC772_14205	COG1301	dicarboxylic acid transport
JC772_14210	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
JC772_14220	COG3874	Sporulation protein YtfJ
JC772_14245	COG0028	Belongs to the TPP enzyme family
JC772_14250	COG0440	acetolactate synthase activity
JC772_14255	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
JC772_14260	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
JC772_14270	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
JC772_14275	COG0066	3-isopropylmalate dehydratase activity
JC772_14285	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
JC772_14295	COG0131	Imidazoleglycerol-phosphate dehydratase
JC772_14300	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
JC772_14305	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
JC772_14310	COG0107	imidazoleglycerol-phosphate synthase activity
JC772_14315	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
JC772_14320	COG0140	phosphoribosyl-ATP diphosphatase activity
JC772_14335	COG1183	phosphatidylcholine synthase activity
JC772_14340	COG1368	sulfuric ester hydrolase activity
JC772_14350	COG0019	diaminopimelate decarboxylase activity
JC772_14360	COG0175	sulfate reduction
JC772_14365	COG2046	Belongs to the sulfate adenylyltransferase family
JC772_14370	COG0529	Catalyzes the synthesis of activated sulfate
JC772_14375	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
JC772_14395	COG1648	precorrin-2 dehydrogenase activity
JC772_14395	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
JC772_14400	COG0733	neurotransmitter:sodium symporter activity
JC772_14415	COG3557	Belongs to the UPF0374 family
JC772_14420	COG1757	Na H antiporter
JC772_14435	COG4758	membrane
JC772_14440	COG4585	Histidine kinase
JC772_14445	COG2197	response regulator
JC772_14450	COG1114	Component of the transport system for branched-chain amino acids
JC772_14455	COG1525	nuclease
JC772_14455	COG4085	toxin activity
JC772_14455	COG0737	Belongs to the 5'-nucleotidase family
JC772_14485	COG3711	transcriptional antiterminator
JC772_14495	COG2723	6-phospho-beta-galactosidase activity
JC772_14510	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
JC772_14510	COG3711	transcriptional antiterminator
JC772_14515	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
JC772_14515	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
JC772_14515	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
JC772_14520	COG1482	cell wall glycoprotein biosynthetic process
JC772_14530	COG2801	Transposase and inactivated derivatives
JC772_14550	COG0730	response to heat
JC772_14555	COG0306	phosphate transporter
JC772_14560	COG1392	Phosphate transport regulator
JC772_14565	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
JC772_14575	COG3852	Histidine kinase
JC772_14580	COG1801	Protein of unknown function DUF72
JC772_14590	COG0582	viral genome integration into host DNA
JC772_14595	COG5002	protein histidine kinase activity
JC772_14600	COG0813	purine-nucleoside phosphorylase activity
JC772_14610	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
JC772_14610	COG0392	lysyltransferase activity
JC772_14625	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
JC772_14630	COG1686	Belongs to the peptidase S11 family
JC772_14635	COG2715	membrane protein required for spore maturation
JC772_14640	COG0700	Nucleoside recognition
JC772_14645	COG1187	pseudouridine synthase activity
JC772_14655	COG1333	cytochrome c biogenesis protein
JC772_14660	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
JC772_14665	COG0745	RESPONSE REGULATOR receiver
JC772_14670	COG5002	protein histidine kinase activity
JC772_14675	COG2096	Adenosyltransferase
JC772_14690	COG3601	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
JC772_14695	COG1141	Ferredoxin
JC772_14705	COG0514	ATP-dependent DNA helicase (RecQ)
JC772_14710	COG1266	CAAX protease self-immunity
JC772_14720	COG1408	metallophosphoesterase
JC772_14735	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
JC772_14750	COG0492	ferredoxin-NADP+ reductase activity
JC772_14765	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
JC772_14775	COG1304	FMN binding
JC772_14800	COG1160	GTP binding
JC772_14805	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
JC772_14825	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
JC772_14835	COG0302	gtp cyclohydrolase
JC772_14840	COG0142	geranyltranstransferase activity
JC772_14845	COG2226	methyltransferase
JC772_14850	COG0142	geranyltranstransferase activity
JC772_14860	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
JC772_14865	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
JC772_14870	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
JC772_14875	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
JC772_14880	COG0457	Tetratricopeptide repeat
JC772_14885	COG5582	Belongs to the UPF0302 family
JC772_14900	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
JC772_14910	COG4347	Protein of unknown function (DUF1405)
JC772_14925	COG2738	Putative neutral zinc metallopeptidase
JC772_14935	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
JC772_14940	COG1694	Mazg nucleotide pyrophosphohydrolase
JC772_14945	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
JC772_14950	COG1803	Methylglyoxal synthase
JC772_14955	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
JC772_14960	COG0438	transferase activity, transferring glycosyl groups
JC772_14965	COG0617	tRNA 3'-terminal CCA addition
JC772_14975	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
JC772_14980	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
JC772_14985	COG0853	Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
JC772_14990	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
JC772_14990	COG1199	ATP-dependent helicase activity
JC772_15010	COG3935	DnaD domain protein
JC772_15015	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
JC772_15025	COG4499	WXG100 protein secretion system (Wss), protein YukC
JC772_15025	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
JC772_15030	COG3331	DNA recombination
JC772_15065	COG4474	Belongs to the UPF0398 family
JC772_15070	COG3599	regulation of cell shape
JC772_15080	COG0116	Belongs to the methyltransferase superfamily
JC772_15090	COG1199	ATP-dependent helicase activity
JC772_15095	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
JC772_15100	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
JC772_15105	COG2233	PERMEase
JC772_15110	COG2311	Membrane
JC772_15115	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
JC772_15125	COG0456	acetyltransferase
JC772_15165	COG3766	membrane
JC772_15175	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
JC772_15180	COG1733	regulation of RNA biosynthetic process
JC772_15200	COG0328	RNA-DNA hybrid ribonuclease activity
JC772_15230	COG1278	Cold shock
JC772_15240	COG3162	membrane
JC772_15245	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
JC772_15250	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
JC772_15255	COG0475	glutathione-regulated potassium exporter activity
JC772_15260	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
JC772_15285	COG2323	membrane
JC772_15290	COG1434	Gram-negative-bacterium-type cell wall biogenesis
JC772_15320	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
JC772_15330	COG2201	protein-glutamate methylesterase activity
JC772_15335	COG2198	Histidine kinase
JC772_15335	COG0643	Histidine kinase
JC772_15340	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
JC772_15340	COG1776	CheC inhibitor of MCP methylation
JC772_15355	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
JC772_15375	COG1256	bacterial-type flagellum assembly
JC772_15380	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
JC772_15385	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
JC772_15400	COG1815	bacterial-type flagellum-dependent cell motility
JC772_15420	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
JC772_15430	COG1157	protein secretion by the type III secretion system
JC772_15465	COG0835	chemotaxis
JC772_15465	COG0784	Response regulator, receiver
JC772_15475	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
JC772_15480	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
JC772_15485	COG0741	lytic transglycosylase activity
JC772_15495	COG1868	FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
JC772_15500	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
JC772_15500	COG1776	CheC inhibitor of MCP methylation
JC772_15510	COG1338	Plays a role in the flagellum-specific transport system
JC772_15515	COG1987	bacterial-type flagellum assembly
JC772_15525	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
JC772_15530	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
JC772_15535	COG1419	protein localization to endoplasmic reticulum
JC772_15540	COG4786	Flagellar basal body rod
JC772_15545	COG0577	efflux transmembrane transporter activity
JC772_15545	COG1136	(ABC) transporter
JC772_15595	COG2814	Major facilitator Superfamily
JC772_15640	COG0367	asparagine synthase
JC772_15660	COG1802	Transcriptional regulator
JC772_15665	COG0697	spore germination
JC772_15675	COG1757	Na H antiporter
JC772_15705	COG0534	Mate efflux family protein
JC772_15710	COG3340	Belongs to the peptidase S51 family
JC772_15715	COG2733	membrane
JC772_15720	COG1280	lysine exporter protein (LysE YggA)
JC772_15725	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
JC772_15735	COG2502	aspartate--ammonia ligase
JC772_15745	COG0109	protoheme IX farnesyltransferase activity
JC772_15770	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
JC772_15775	COG0488	(ABC) transporter
JC772_15780	COG4166	transmembrane transport
JC772_15785	COG2223	nitrite transmembrane transporter activity
JC772_15790	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
JC772_15795	COG2244	polysaccharide biosynthetic process
JC772_15800	COG0733	neurotransmitter:sodium symporter activity
JC772_15805	COG5566	PFAM Mor transcription activator
JC772_15820	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
JC772_15825	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
JC772_15835	COG0129	dihydroxy-acid dehydratase activity
JC772_15840	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
JC772_15870	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
JC772_15875	COG2814	Major facilitator Superfamily
JC772_15880	COG3384	dioxygenase
JC772_15900	COG0402	S-adenosylhomocysteine deaminase activity
JC772_15905	COG4166	transmembrane transport
JC772_15915	COG1914	H( )-stimulated, divalent metal cation uptake system
JC772_15920	COG1054	Belongs to the UPF0176 family
JC772_15930	COG0083	homoserine kinase activity
JC772_15940	COG2390	Transcriptional regulator
JC772_15945	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
JC772_15960	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
JC772_15970	COG1510	regulation of RNA biosynthetic process
JC772_15975	COG1012	belongs to the aldehyde dehydrogenase family
JC772_15980	COG1454	alcohol dehydrogenase
JC772_15995	COG1012	belongs to the aldehyde dehydrogenase family
JC772_16000	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
JC772_16005	COG0628	permease
JC772_16015	COG0523	cobalamin synthesis protein
JC772_16040	COG1686	Belongs to the peptidase S11 family
JC772_16055	COG0791	NLP P60 protein
JC772_16055	COG1388	LysM domain
JC772_16060	COG0300	oxidoreductase activity
JC772_16070	COG0460	homoserine dehydrogenase
JC772_16080	COG0083	homoserine kinase activity
JC772_16085	COG1316	TRANSCRIPTIONal
JC772_16100	COG1285	pathogenesis
JC772_16105	COG1247	-acetyltransferase
JC772_16120	COG1752	Esterase of the alpha-beta hydrolase superfamily
JC772_16140	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
JC772_16145	COG0577	efflux transmembrane transporter activity
JC772_16150	COG2409	Drug exporters of the RND superfamily
JC772_16155	COG1404	Belongs to the peptidase S8 family
JC772_16170	COG0840	transmembrane signaling receptor activity
JC772_16185	COG3949	Membrane
JC772_16190	COG0783	Belongs to the Dps family
JC772_16210	COG0523	cobalamin synthesis protein
JC772_16220	COG0803	Belongs to the bacterial solute-binding protein 9 family
JC772_16235	COG1902	pentaerythritol trinitrate reductase activity
JC772_16240	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
JC772_16250	COG4166	transmembrane transport
JC772_16255	COG0346	lactoylglutathione lyase activity
JC772_16265	COG5337	Spore coat protein CotH
JC772_16270	COG1051	belongs to the nudix hydrolase family
JC772_16275	COG0586	Pfam SNARE associated Golgi protein
JC772_16280	COG2244	polysaccharide biosynthetic process
JC772_16290	COG0701	Predicted permease
JC772_16295	COG3689	TIGRFAM TIGR03943 family protein
JC772_16300	COG1607	acyl-coa hydrolase
JC772_16310	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
JC772_16320	COG1028	Short-chain dehydrogenase reductase Sdr
JC772_16330	COG2839	Protein conserved in bacteria
JC772_16335	COG1253	flavin adenine dinucleotide binding
JC772_16350	COG1114	Component of the transport system for branched-chain amino acids
JC772_16365	COG0860	N-Acetylmuramoyl-L-alanine amidase
JC772_16375	COG1876	peptidase activity
JC772_16425	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
JC772_16430	COG1819	glycosyl
JC772_16435	COG1819	glycosyl
JC772_16440	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
JC772_16490	COG4499	WXG100 protein secretion system (Wss), protein YukC
JC772_16545	COG3874	Sporulation protein YtfJ
JC772_16570	COG2226	methyltransferase
JC772_16595	COG0386	Belongs to the glutathione peroxidase family
JC772_16615	COG0640	Transcriptional regulator
JC772_16620	COG0798	PFAM Bile acid sodium symporter
JC772_16625	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
JC772_16665	COG1418	mRNA catabolic process
JC772_16670	COG0488	(ABC) transporter
JC772_16680	COG0629	single-stranded DNA binding
JC772_16685	COG1413	lyase activity
JC772_16700	COG2136	Putative SAM-dependent methyltransferase
JC772_16700	COG2521	methyltransferase
JC772_16705	COG0018	arginyl-trna synthetase
JC772_16715	COG0733	neurotransmitter:sodium symporter activity
JC772_16720	COG0596	Alpha beta hydrolase
JC772_16730	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
JC772_16735	COG0477	Major facilitator Superfamily
JC772_16755	COG2610	gluconate transmembrane transporter activity
JC772_16765	COG0456	acetyltransferase
JC772_16770	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
JC772_16780	COG1131	(ABC) transporter
JC772_16785	COG4473	ABC transporter
JC772_16800	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
JC772_16805	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
JC772_16815	COG0768	penicillin binding
JC772_16825	COG0204	Acyl-transferase
JC772_16830	COG1272	protein, Hemolysin III
JC772_16835	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
JC772_16840	COG0805	protein transport
JC772_16850	COG1307	EDD domain protein, DegV family
JC772_16860	COG1999	signal sequence binding
JC772_16865	COG0071	Belongs to the small heat shock protein (HSP20) family
JC772_16870	COG0367	asparagine synthase
JC772_16880	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
JC772_16900	COG0071	Belongs to the small heat shock protein (HSP20) family
JC772_16910	COG1737	Transcriptional regulator
JC772_16915	COG1070	Carbohydrate kinase
JC772_16925	COG1023	phosphogluconate dehydrogenase (decarboxylating) activity
JC772_16980	COG1151	hydroxylamine reductase activity
JC772_16990	COG1253	flavin adenine dinucleotide binding
JC772_16995	COG5506	Protein of unknown function (DUF1694)
JC772_17015	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
JC772_17020	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
JC772_17025	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
JC772_17030	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
JC772_17035	COG0456	acetyltransferase
JC772_17040	COG3829	transcription factor binding
JC772_17045	COG1509	lysine 2,3-aminomutase activity
JC772_17055	COG4479	Belongs to the UPF0346 family
JC772_17080	COG0515	serine threonine protein kinase
JC772_17080	COG1357	PFAM Pentapeptide repeats (8 copies)
JC772_17085	COG0671	phosphoesterase, PA-phosphatase related
JC772_17090	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
JC772_17095	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
JC772_17130	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
JC772_17140	COG0726	polysaccharide deacetylase
JC772_17145	COG1408	metallophosphoesterase
JC772_17150	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
JC772_17155	COG2323	membrane
JC772_17160	COG0671	phosphoesterase, PA-phosphatase related
JC772_17175	COG1280	lysine exporter protein (LysE YggA)
JC772_17180	COG3403	YqcI/YcgG family
JC772_17205	COG4499	WXG100 protein secretion system (Wss), protein YukC
JC772_17205	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
JC772_17210	COG0372	Belongs to the citrate synthase family
JC772_17215	COG2079	MmgE PrpD family protein
JC772_17220	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
JC772_17225	COG1960	acyl-CoA dehydrogenase activity
JC772_17230	COG2084	Dehydrogenase
JC772_17235	COG1012	belongs to the aldehyde dehydrogenase family
JC772_17245	COG1280	lysine exporter protein (LysE YggA)
JC772_17265	COG0420	3'-5' exonuclease activity
JC772_17270	COG0419	ATPase involved in DNA repair
JC772_17275	COG3104	oligopeptide transport
JC772_17305	COG3208	Thioesterase involved in non-ribosomal peptide biosynthesis
JC772_17310	COG1131	(ABC) transporter
JC772_17330	COG1131	(ABC) transporter
JC772_17335	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
JC772_17355	COG1942	4-Oxalocrotonate Tautomerase
JC772_17380	COG0457	Tetratricopeptide repeat
JC772_17410	COG1028	Short-chain dehydrogenase reductase Sdr
JC772_17415	COG1169	isochorismate synthase
JC772_17420	COG1021	2,3-dihydroxybenzoate-AMP ligase
JC772_17425	COG3433	isochorismatase activity
JC772_17425	COG1535	isochorismatase
JC772_17430	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
JC772_17435	COG3251	PFAM MbtH domain protein
JC772_17440	COG2814	Major facilitator Superfamily
JC772_17455	COG0776	regulation of translation
JC772_17470	COG2329	Antibiotic biosynthesis monooxygenase
JC772_17475	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
JC772_17510	COG3208	Thioesterase involved in non-ribosomal peptide biosynthesis
JC772_17515	COG1232	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
JC772_17520	COG0667	Aldo Keto reductase
JC772_17540	COG0010	Belongs to the arginase family
JC772_17550	COG1132	(ABC) transporter
JC772_17555	COG1132	(ABC) transporter
JC772_17585	COG1649	PFAM Uncharacterised BCR, COG1649
JC772_17605	COG2971	BadF BadG BcrA BcrD
JC772_17625	COG0588	phosphoglycerate mutase activity
JC772_17655	COG2195	Cleaves the N-terminal amino acid of tripeptides
JC772_17665	COG1960	acyl-CoA dehydrogenase activity
JC772_17670	COG0439	Biotin carboxylase
JC772_17675	COG0511	ligase activity, forming carbon-carbon bonds
JC772_17680	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
JC772_17685	COG1024	Enoyl-CoA hydratase
JC772_17690	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
JC772_17695	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
JC772_17705	COG1216	Glycosyl transferase, family 2
JC772_17710	COG0640	Transcriptional regulator
JC772_17715	COG1686	Belongs to the peptidase S11 family
JC772_17720	COG5002	protein histidine kinase activity
JC772_17750	COG0789	Transcriptional regulator
JC772_17770	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
JC772_17780	COG1028	Short-chain dehydrogenase reductase Sdr
JC772_17800	COG0475	glutathione-regulated potassium exporter activity
JC772_17820	COG1309	transcriptional regulator
JC772_17830	COG1028	Short-chain dehydrogenase reductase Sdr
JC772_17835	COG2002	toxin-antitoxin pair type II binding
JC772_17855	COG0693	protein deglycase activity
JC772_17860	COG0201	protein transport
JC772_17880	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
JC772_17885	COG0322	excinuclease ABC activity
JC772_17890	COG2318	DinB family
JC772_17900	COG4667	esterase of the alpha-beta hydrolase superfamily
JC772_17920	COG1051	belongs to the nudix hydrolase family
JC772_17970	COG2223	nitrite transmembrane transporter activity
JC772_18010	COG1216	Glycosyl transferase, family 2
JC772_18025	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
JC772_18030	COG1279	arginine transmembrane transporter activity
JC772_18065	COG1794	racemase activity, acting on amino acids and derivatives
JC772_18075	COG2828	Protein conserved in bacteria
JC772_18080	COG5002	protein histidine kinase activity
JC772_18085	COG0561	phosphatase activity
JC772_18105	COG2124	cytochrome p450
JC772_18140	COG0457	Tetratricopeptide repeat
JC772_18150	COG3512	CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
JC772_18180	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
JC772_18185	COG4146	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
JC772_18190	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
JC772_18200	COG2959	enzyme of heme biosynthesis
JC772_18230	COG1878	Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation
JC772_18235	COG3844	kynureninase activity
JC772_18245	COG1028	Short-chain dehydrogenase reductase Sdr
JC772_18255	COG4176	ABC-type proline glycine betaine transport system permease component
JC772_18260	COG0517	IMP dehydrogenase activity
JC772_18260	COG4175	Glycine betaine
JC772_18290	COG2153	protein acetylation
JC772_18325	COG0514	ATP-dependent DNA helicase (RecQ)
JC772_18350	COG4637	Psort location Cytoplasmic, score
JC772_18355	COG1227	inorganic diphosphatase activity
JC772_18365	COG3397	chitin binding
JC772_18410	COG4166	transmembrane transport
JC772_18420	COG4948	Mandelate Racemase Muconate Lactonizing
JC772_18500	COG1307	EDD domain protein, DegV family
JC772_18540	COG5444	nuclease activity
JC772_18625	COG5444	nuclease activity
JC772_18645	COG2261	transglycosylase associated protein
JC772_18650	COG0675	Transposase, IS605 OrfB family
JC772_18680	COG0436	Aminotransferase
JC772_18695	COG3973	AAA domain
JC772_18700	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
JC772_18725	COG0628	permease
JC772_18735	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
JC772_18740	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
JC772_18745	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
JC772_18760	COG2746	aminoglycoside 3-N-acetyltransferase activity
JC772_18775	COG0454	-acetyltransferase
JC772_18775	COG0456	acetyltransferase
JC772_18800	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
JC772_18810	COG0488	(ABC) transporter
JC772_18815	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
JC772_18815	COG1605	Chorismate mutase
JC772_18835	COG0346	lactoylglutathione lyase activity
JC772_18845	COG3547	Transposase (IS116 IS110 IS902 family)
JC772_18850	COG1343	CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
JC772_18890	COG2329	Antibiotic biosynthesis monooxygenase
JC772_18905	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
JC772_18930	COG0494	nUDIX hydrolase
JC772_18945	COG0456	acetyltransferase
JC772_18950	COG0477	Major facilitator Superfamily
JC772_18960	COG0697	spore germination
JC772_18965	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
JC772_18975	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
JC772_18990	COG0730	response to heat
JC772_19000	COG0833	amino acid
JC772_19020	COG2039	Removes 5-oxoproline from various penultimate amino acid residues except L-proline
JC772_19035	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
JC772_19040	COG1984	allophanate hydrolase subunit 2
JC772_19045	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
JC772_19050	COG1414	Transcriptional regulator
JC772_19065	COG1960	acyl-CoA dehydrogenase activity
JC772_19075	COG3314	Sporulation integral membrane protein YlbJ
JC772_19090	COG0346	lactoylglutathione lyase activity
JC772_19100	COG1210	Utp--glucose-1-phosphate uridylyltransferase
JC772_19105	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
JC772_19110	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
JC772_19115	COG0438	transferase activity, transferring glycosyl groups
JC772_19130	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
JC772_19135	COG0438	transferase activity, transferring glycosyl groups
JC772_19140	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
JC772_19150	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
JC772_19170	COG4851	CamS sex pheromone cAM373 precursor
JC772_19265	COG0477	Major facilitator Superfamily
JC772_19280	COG1846	Transcriptional regulator
JC772_19285	COG2814	Major facilitator Superfamily
JC772_19295	COG2031	fatty acid transporter
JC772_19325	COG1122	ATPase activity
JC772_19350	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
JC772_19370	COG1131	(ABC) transporter
JC772_19390	COG2365	Tyrosine phosphatase family
JC772_19430	COG3449	Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell
JC772_19435	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
JC772_19440	COG0579	oxidoreductase
JC772_19445	COG4843	Uncharacterized protein conserved in bacteria (DUF2179)
JC772_19455	COG1253	flavin adenine dinucleotide binding
JC772_19460	COG0789	Transcriptional regulator
JC772_19465	COG3813	Protein conserved in bacteria
JC772_19545	COG0582	viral genome integration into host DNA
JC772_19650	COG2072	flavoprotein involved in K transport
JC772_19680	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
JC772_19685	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
JC772_19695	COG1193	negative regulation of DNA recombination
JC772_19700	COG2162	N-hydroxyarylamine O-acetyltransferase activity
JC772_19705	COG1164	Oligoendopeptidase f
JC772_19725	COG0584	glycerophosphoryl diester phosphodiesterase
JC772_19730	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
JC772_19760	COG3397	chitin binding
JC772_19770	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
JC772_19775	COG0277	FAD linked oxidase domain protein
JC772_19780	COG1285	pathogenesis
JC772_19785	COG2720	vancomycin resistance protein
JC772_20005	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
JC772_20120	COG1484	DNA-dependent DNA replication
JC772_20170	COG0582	viral genome integration into host DNA
JC772_20195	COG1278	Cold shock
JC772_20205	COG1028	Short-chain dehydrogenase reductase Sdr
JC772_20210	COG0165	Argininosuccinate lyase
JC772_20225	COG3409	Peptidoglycan-binding domain 1 protein
JC772_20240	COG4145	pantothenate transmembrane transporter activity
JC772_20250	COG1012	belongs to the aldehyde dehydrogenase family
JC772_20260	COG1657	PFAM Prenyltransferase squalene oxidase
JC772_20265	COG1963	PFAM Acid phosphatase vanadium-dependent haloperoxidase related
JC772_20270	COG2962	Rard protein
JC772_20305	COG2226	methyltransferase
JC772_20310	COG4166	transmembrane transport
JC772_20315	COG4166	transmembrane transport
JC772_20320	COG1301	dicarboxylic acid transport
JC772_20325	COG0673	inositol 2-dehydrogenase activity
JC772_20330	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
JC772_20335	COG0187	DNA topoisomerase II activity
JC772_20340	COG1832	CoA-binding protein
JC772_20345	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
JC772_20350	COG0745	RESPONSE REGULATOR receiver
JC772_20365	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
JC772_20370	COG4841	protein insertion into membrane
JC772_20380	COG0824	Thioesterase
JC772_20410	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
JC772_20415	COG3655	Transcriptional regulator
JC772_20425	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
JC772_20465	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
JC772_20470	COG0318	PFAM AMP-dependent synthetase and ligase
JC772_20495	COG0457	Tetratricopeptide repeat
JC772_20560	COG2826	transposase and inactivated derivatives, IS30 family
JC772_20575	COG0534	Mate efflux family protein
JC772_20600	COG3023	N-Acetylmuramoyl-L-alanine amidase
JC772_20610	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
JC772_20620	COG5002	protein histidine kinase activity
JC772_20625	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
JC772_20630	COG0010	Belongs to the arginase family
JC772_20635	COG1228	amidohydrolase
JC772_20640	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
JC772_20645	COG2986	histidine ammonia-lyase
JC772_20665	COG4846	Membrane protein involved in cytochrome C biogenesis
JC772_20670	COG0785	Cytochrome C biogenesis protein
JC772_20685	COG0583	DNA-binding transcription factor activity
JC772_20690	COG1380	Effector of murein hydrolase LrgA
JC772_20695	COG1346	cytolysis
JC772_20700	COG4187	Peptidase family M20/M25/M40
JC772_20710	COG0833	amino acid
JC772_20720	COG0730	response to heat
JC772_20730	COG5632	N-Acetylmuramoyl-L-alanine amidase
JC772_20730	COG3409	Peptidoglycan-binding domain 1 protein
JC772_20745	COG1132	(ABC) transporter
JC772_20750	COG1132	(ABC) transporter
JC772_20755	COG3763	UPF0154 protein
JC772_20770	COG3639	organic phosphonate transmembrane transporter activity
JC772_20775	COG3639	organic phosphonate transmembrane transporter activity
JC772_20790	COG0737	Belongs to the 5'-nucleotidase family
JC772_20795	COG4224	UPF0291 protein
JC772_20800	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
JC772_20805	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
JC772_20820	COG1695	Transcriptional regulator
JC772_20860	COG3328	transposase activity
JC772_20865	COG3328	transposase activity
JC772_20870	COG3328	transposase activity
JC772_20885	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
JC772_20920	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
JC772_20935	COG0730	response to heat
JC772_20980	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
JC772_21050	COG3723	Recombinational DNA repair protein, rece pathway
JC772_21060	COG5377	YqaJ viral recombinase family
JC772_21110	COG0582	viral genome integration into host DNA
JC772_21115	COG0174	glutamine synthetase
JC772_21120	COG0789	Transcriptional regulator
JC772_21125	COG4100	CystaTHIonine beta-lyase family protein involved in aluminum resistance
JC772_21130	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
JC772_21135	COG2860	membrane
JC772_21145	COG0464	growth
JC772_21160	COG1923	regulation of RNA biosynthetic process
JC772_21165	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
JC772_21175	COG3584	3D domain protein
JC772_21175	COG1388	LysM domain
JC772_21180	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
JC772_21180	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
JC772_21180	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
JC772_21185	COG1105	Belongs to the carbohydrate kinase PfkB family
JC772_21190	COG1349	DNA-binding transcription factor activity
JC772_21195	COG2322	membrane
JC772_21215	COG2116	formate transmembrane transporter activity
JC772_21225	COG1937	Protein conserved in bacteria
JC772_21230	COG2819	hydrolase of the alpha beta superfamily
JC772_21235	COG1120	ATPase activity
JC772_21240	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JC772_21245	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JC772_21250	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
JC772_21255	COG2706	6-phosphogluconolactonase activity
JC772_21260	COG2826	transposase and inactivated derivatives, IS30 family
JC772_21265	COG2195	Cleaves the N-terminal amino acid of tripeptides
JC772_21275	COG0346	lactoylglutathione lyase activity
JC772_21285	COG1113	amino acid transport
JC772_21295	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
JC772_21300	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
JC772_21310	COG4550	Control of competence regulator ComK, YlbF/YmcA
JC772_21315	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
JC772_21320	COG1013	pyruvate-flavodoxin oxidoreductase activity
JC772_21325	COG0674	pyruvate-flavodoxin oxidoreductase activity
JC772_21325	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
JC772_21335	COG2359	stage V sporulation protein S
JC772_21340	COG1692	metallophosphoesterase
JC772_21345	COG1418	mRNA catabolic process
JC772_21350	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
JC772_21355	COG1058	Belongs to the CinA family
JC772_21355	COG1546	Belongs to the CinA family
JC772_21360	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
JC772_21365	COG1426	Protein conserved in bacteria
JC772_21380	COG0300	oxidoreductase activity
JC772_21385	COG0612	Peptidase, M16
JC772_21390	COG0612	Peptidase, M16
JC772_21395	COG1079	Belongs to the binding-protein-dependent transport system permease family
JC772_21400	COG4603	Belongs to the binding-protein-dependent transport system permease family
JC772_21405	COG3845	ABC transporter
JC772_21410	COG1744	ABC transporter substrate-binding protein PnrA-like
JC772_21415	COG2188	Transcriptional regulator
JC772_21480	COG4166	transmembrane transport
JC772_21490	COG0457	Tetratricopeptide repeat
JC772_21525	COG1192	Involved in chromosome partitioning
JC772_21685	COG0741	lytic transglycosylase activity
JC772_21685	COG0791	NLP P60 protein
JC772_21770	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
JC772_21830	COG1028	Short-chain dehydrogenase reductase Sdr
JC772_21855	COG0583	DNA-binding transcription factor activity
JC772_21880	COG4974	Belongs to the 'phage' integrase family