locus-tag class description JC776_00005 PF01624 MutS domain I JC776_00005 PF05188 MutS domain II JC776_00005 PF05192 MutS domain III JC776_00005 PF05190 MutS family domain IV JC776_00005 PF00488 MutS domain V JC776_00015 PF01522 Polysaccharide deacetylase JC776_00020 PF03816 Cell envelope-related transcriptional attenuator domain JC776_00025 PF08544 GHMP kinases C terminal JC776_00025 PF00288 GHMP kinases N terminal domain JC776_00030 PF00291 Pyridoxal-phosphate dependent enzyme JC776_00035 PF01842 ACT domain JC776_00035 PF00742 Homoserine dehydrogenase JC776_00035 PF03447 Homoserine dehydrogenase, NAD binding domain JC776_00045 PF00106 short chain dehydrogenase JC776_00050 PF01476 LysM domain JC776_00050 PF00877 NlpC/P60 family JC776_00060 PF01648 4'-phosphopantetheinyl transferase superfamily JC776_00065 PF07943 Penicillin-binding protein 5, C-terminal domain JC776_00065 PF00768 D-alanyl-D-alanine carboxypeptidase JC776_00090 PF02492 CobW/HypB/UreG, nucleotide-binding domain JC776_00090 PF07683 Cobalamin synthesis protein cobW C-terminal domain JC776_00095 PF00056 lactate/malate dehydrogenase, NAD binding domain JC776_00095 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain JC776_00100 PF01594 AI-2E family transporter JC776_00105 PF00202 Aminotransferase class-III JC776_00110 PF00171 Aldehyde dehydrogenase family JC776_00120 PF02525 Flavodoxin-like fold JC776_00125 PF00465 Iron-containing alcohol dehydrogenase JC776_00130 PF00171 Aldehyde dehydrogenase family JC776_00145 PF01751 Toprim domain JC776_00145 PF13342 C-terminal repeat of topoisomerase JC776_00145 PF01396 Topoisomerase DNA binding C4 zinc finger JC776_00145 PF01131 DNA topoisomerase JC776_00155 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JC776_00160 PF01791 DeoC/LacD family aldolase JC776_00165 PF04198 Putative sugar-binding domain JC776_00185 PF17773 UPF0176 acylphosphatase like domain JC776_00185 PF12368 Rhodanase C-terminal JC776_00185 PF00581 Rhodanese-like domain JC776_00190 PF01566 Natural resistance-associated macrophage protein JC776_00200 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JC776_00205 PF01979 Amidohydrolase family JC776_00225 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase JC776_00230 PF07690 Major Facilitator Superfamily JC776_00235 PF00899 ThiF family JC776_00240 PF07690 Major Facilitator Superfamily JC776_00265 PF00585 C-terminal regulatory domain of Threonine dehydratase JC776_00265 PF00291 Pyridoxal-phosphate dependent enzyme JC776_00270 PF00920 Dehydratase family JC776_00280 PF01063 Amino-transferase class IV JC776_00285 PF01625 Peptide methionine sulfoxide reductase JC776_00305 PF00209 Sodium:neurotransmitter symporter family JC776_00310 PF01943 Polysaccharide biosynthesis protein JC776_00310 PF14667 Polysaccharide biosynthesis C-terminal domain JC776_00315 PF00291 Pyridoxal-phosphate dependent enzyme JC776_00320 PF07690 Major Facilitator Superfamily JC776_00325 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JC776_00330 PF00005 ABC transporter JC776_00330 PF12848 ABC transporter JC776_00335 PF16360 GTP-binding GTPase Middle Region JC776_00335 PF01926 50S ribosome-binding GTPase JC776_00335 PF13167 GTP-binding GTPase N-terminal JC776_00355 PF00696 Amino acid kinase family JC776_00355 PF13840 ACT domain JC776_00360 PF01040 UbiA prenyltransferase family JC776_00365 PF00440 Bacterial regulatory proteins, tetR family JC776_00370 PF03590 Aspartate-ammonia ligase JC776_00380 PF00176 SNF2 family N-terminal domain JC776_00380 PF12419 SNF2 Helicase protein JC776_00380 PF00271 Helicase conserved C-terminal domain JC776_00385 PF01810 LysE type translocator JC776_00390 PF04286 Protein of unknown function (DUF445) JC776_00395 PF03575 Peptidase family S51 JC776_00400 PF01554 MatE JC776_00420 PF10415 Fumarase C C-terminus JC776_00420 PF00206 Lyase JC776_00430 PF03553 Na+/H+ antiporter family JC776_00435 PF12650 Domain of unknown function (DUF3784) JC776_00440 PF00892 EamA-like transporter family JC776_00445 PF00392 Bacterial regulatory proteins, gntR family JC776_00445 PF07729 FCD domain JC776_00465 PF13537 Glutamine amidotransferase domain JC776_00465 PF00733 Asparagine synthase JC776_00510 PF07690 Major Facilitator Superfamily JC776_00515 PF08141 Small acid-soluble spore protein H family JC776_00525 PF17329 Family of unknown function (DUF5367) JC776_00560 PF12704 MacB-like periplasmic core domain JC776_00560 PF02687 FtsX-like permease family JC776_00560 PF00005 ABC transporter JC776_00565 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JC776_00565 PF00460 Flagella basal body rod protein JC776_00570 PF00448 SRP54-type protein, GTPase domain JC776_00575 PF00771 FHIPEP family JC776_00580 PF01312 FlhB HrpN YscU SpaS Family JC776_00590 PF01313 Bacterial export proteins, family 3 JC776_00595 PF00813 FliP family JC776_00605 PF04509 CheC-like family JC776_00605 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term JC776_00610 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term JC776_00610 PF02154 Flagellar motor switch protein FliM JC776_00615 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term JC776_00620 PF01464 Transglycosylase SLT domain JC776_00625 PF00700 Bacterial flagellin C-terminal helical region JC776_00625 PF00669 Bacterial flagellin N-terminal helical region JC776_00630 PF00669 Bacterial flagellin N-terminal helical region JC776_00630 PF00700 Bacterial flagellin C-terminal helical region JC776_00635 PF12181 DNA binding domain of the motility gene repressor (MogR) JC776_00640 PF00072 Response regulator receiver domain JC776_00640 PF01584 CheW-like domain JC776_00655 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JC776_00655 PF00460 Flagella basal body rod protein JC776_00655 PF07559 Flagellar basal body protein FlaE JC776_00675 PF02874 ATP synthase alpha/beta family, beta-barrel domain JC776_00675 PF18269 T3SS EscN ATPase C-terminal domain JC776_00675 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JC776_00685 PF01706 FliG C-terminal domain JC776_00685 PF14841 FliG middle domain JC776_00685 PF14842 FliG N-terminal domain JC776_00690 PF01514 Secretory protein of YscJ/FliF family JC776_00690 PF08345 Flagellar M-ring protein C-terminal JC776_00695 PF02049 Flagellar hook-basal body complex protein FliE JC776_00700 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JC776_00700 PF00460 Flagella basal body rod protein JC776_00705 PF00460 Flagella basal body rod protein JC776_00720 PF02465 Flagellar hook-associated protein 2 N-terminus JC776_00720 PF07196 Flagellin hook IN motif JC776_00720 PF07195 Flagellar hook-associated protein 2 C-terminus JC776_00725 PF00669 Bacterial flagellin N-terminal helical region JC776_00725 PF00700 Bacterial flagellin C-terminal helical region JC776_00730 PF00460 Flagella basal body rod protein JC776_00730 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JC776_00750 PF01739 CheR methyltransferase, SAM binding domain JC776_00750 PF03705 CheR methyltransferase, all-alpha domain JC776_00765 PF04509 CheC-like family JC776_00765 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term JC776_00770 PF07194 P2 response regulator binding domain JC776_00770 PF01627 Hpt domain JC776_00770 PF02895 Signal transducing histidine kinase, homodimeric domain JC776_00770 PF01584 CheW-like domain JC776_00770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC776_00775 PF00072 Response regulator receiver domain JC776_00780 PF13677 Membrane MotB of proton-channel complex MotA/MotB JC776_00780 PF00691 OmpA family JC776_00785 PF01618 MotA/TolQ/ExbB proton channel family JC776_00805 PF09680 Family of unknown function JC776_00810 PF00881 Nitroreductase family JC776_00815 PF02698 DUF218 domain JC776_00820 PF04239 Protein of unknown function (DUF421) JC776_00845 PF00753 Metallo-beta-lactamase superfamily JC776_00845 PF17770 Ribonuclease J C-terminal domain JC776_00845 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain JC776_00850 PF00999 Sodium/hydrogen exchanger family JC776_00855 PF00202 Aminotransferase class-III JC776_00860 PF00474 Sodium:solute symporter family JC776_00865 PF04341 Protein of unknown function, DUF485 JC776_00875 PF00313 'Cold-shock' DNA-binding domain JC776_00900 PF01263 Aldose 1-epimerase JC776_00905 PF13456 Reverse transcriptase-like JC776_00925 PF01638 HxlR-like helix-turn-helix JC776_00930 PF01367 5'-3' exonuclease, C-terminal SAM fold JC776_00930 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain JC776_00935 PF00689 Cation transporting ATPase, C-terminus JC776_00935 PF00690 Cation transporter/ATPase, N-terminus JC776_00940 PF03994 Domain of Unknown Function (DUF350) JC776_00970 PF00581 Rhodanese-like domain JC776_00975 PF10752 Protein of unknown function (DUF2533) JC776_00980 PF00583 Acetyltransferase (GNAT) family JC776_00990 PF00350 Dynamin family JC776_00995 PF04235 Protein of unknown function (DUF418) JC776_01000 PF00860 Permease family JC776_01005 PF00156 Phosphoribosyl transferase domain JC776_01010 PF02074 Carboxypeptidase Taq (M32) metallopeptidase JC776_01015 PF13307 Helicase C-terminal domain JC776_01025 PF02926 THUMP domain JC776_01025 PF01170 Putative RNA methylase family UPF0020 JC776_01035 PF05103 DivIVA protein JC776_01040 PF06908 YspA SLOG family JC776_01045 PF11122 Inner spore coat protein D JC776_01070 PF10720 Protein of unknown function (DUF2515) JC776_01075 PF03838 Recombination protein U JC776_01080 PF00905 Penicillin binding protein transpeptidase domain JC776_01080 PF00912 Transglycosylase JC776_01090 PF10576 Iron-sulfur binding domain of endonuclease III JC776_01090 PF00730 HhH-GPD superfamily base excision DNA repair protein JC776_01090 PF00633 Helix-hairpin-helix motif JC776_01095 PF07261 Replication initiation and membrane attachment JC776_01100 PF00155 Aminotransferase class I and II JC776_01110 PF14084 Protein of unknown function (DUF4264) JC776_01115 PF13307 Helicase C-terminal domain JC776_01115 PF04851 Type III restriction enzyme, res subunit JC776_01115 PF00929 Exonuclease JC776_01120 PF02261 Aspartate decarboxylase JC776_01125 PF02569 Pantoate-beta-alanine ligase JC776_01130 PF02548 Ketopantoate hydroxymethyltransferase JC776_01135 PF03099 Biotin/lipoate A/B protein ligase family JC776_01135 PF08279 HTH domain JC776_01135 PF02237 Biotin protein ligase C terminal domain JC776_01140 PF01743 Poly A polymerase head domain JC776_01140 PF12627 Probable RNA and SrmB- binding site of polymerase A JC776_01140 PF13735 tRNA nucleotidyltransferase domain 2 putative JC776_01145 PF13439 Glycosyltransferase Family 4 JC776_01145 PF00534 Glycosyl transferases group 1 JC776_01150 PF02585 GlcNAc-PI de-N-acetylase JC776_01155 PF02142 MGS-like domain JC776_01160 PF05173 Dihydrodipicolinate reductase, C-terminus JC776_01160 PF01113 Dihydrodipicolinate reductase, N-terminus JC776_01165 PF03819 MazG nucleotide pyrophosphohydrolase domain JC776_01170 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JC776_01170 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JC776_01180 PF04298 Putative neutral zinc metallopeptidase JC776_01195 PF07187 Protein of unknown function (DUF1405) JC776_01200 PF00032 Cytochrome b(C-terminal)/b6/petD JC776_01200 PF13442 Cytochrome C oxidase, cbb3-type, subunit III JC776_01205 PF00033 Cytochrome b/b6/petB JC776_01210 PF00355 Rieske [2Fe-2S] domain JC776_01215 PF10673 Protein of unknown function (DUF2487) JC776_01220 PF08858 IDEAL domain JC776_01220 PF08864 UPF0302 domain JC776_01230 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JC776_01235 PF00155 Aminotransferase class I and II JC776_01240 PF01761 3-dehydroquinate synthase JC776_01245 PF01264 Chorismate synthase JC776_01250 PF00334 Nucleoside diphosphate kinase JC776_01255 PF00348 Polyprenyl synthetase JC776_01260 PF01209 ubiE/COQ5 methyltransferase family JC776_01265 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 JC776_01270 PF01227 GTP cyclohydrolase I JC776_01275 PF00216 Bacterial DNA-binding protein JC776_01280 PF09547 Stage IV sporulation protein A (spore_IV_A) JC776_01290 PF10966 Protein of unknown function (DUF2768) JC776_01300 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus JC776_01300 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus JC776_01305 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal JC776_01305 PF01926 50S ribosome-binding GTPase JC776_01315 PF14045 YIEGIA protein JC776_01325 PF14140 YpzI-like protein JC776_01330 PF01070 FMN-dependent dehydrogenase JC776_01335 PF00575 S1 RNA binding domain JC776_01340 PF02224 Cytidylate kinase JC776_01350 PF17763 Glutaminase/Asparaginase C-terminal domain JC776_01350 PF00710 Asparaginase, N-terminal JC776_01370 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase JC776_01370 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain JC776_01375 PF05389 Negative regulator of genetic competence (MecA) JC776_01380 PF02310 B12 binding domain JC776_01380 PF02607 B12 binding domain JC776_01380 PF13411 MerR HTH family regulatory protein JC776_01385 PF00149 Calcineurin-like phosphoesterase JC776_01395 PF02517 CPBP intramembrane metalloprotease JC776_01400 PF00270 DEAD/DEAH box helicase JC776_01400 PF00271 Helicase conserved C-terminal domain JC776_01415 PF12822 ECF transporter, substrate-specific component JC776_01425 PF01476 LysM domain JC776_01425 PF01551 Peptidase family M23 JC776_01430 PF01923 Cobalamin adenosyltransferase JC776_01435 PF00512 His Kinase A (phospho-acceptor) domain JC776_01435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC776_01435 PF18698 Histidine kinase sensor domain JC776_01435 PF00989 PAS fold JC776_01435 PF00672 HAMP domain JC776_01440 PF00072 Response regulator receiver domain JC776_01440 PF00486 Transcriptional regulatory protein, C terminal JC776_01445 PF01578 Cytochrome C assembly protein JC776_01450 PF05140 ResB-like family JC776_01455 PF00578 AhpC/TSA family JC776_01460 PF00849 RNA pseudouridylate synthase JC776_01460 PF01479 S4 domain JC776_01465 PF07670 Nucleoside recognition JC776_01470 PF07670 Nucleoside recognition JC776_01475 PF00768 D-alanyl-D-alanine carboxypeptidase JC776_01475 PF07943 Penicillin-binding protein 5, C-terminal domain JC776_01480 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain JC776_01480 PF02777 Iron/manganese superoxide dismutases, C-terminal domain JC776_01495 PF09924 Uncharacterised conserved protein (DUF2156) JC776_01495 PF03706 Lysylphosphatidylglycerol synthase TM region JC776_01505 PF01048 Phosphorylase superfamily JC776_01510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC776_01510 PF00512 His Kinase A (phospho-acceptor) domain JC776_01510 PF00989 PAS fold JC776_01510 PF16736 Single Cache-like JC776_01515 PF00589 Phage integrase family JC776_01525 PF01904 Protein of unknown function DUF72 JC776_01530 PF00989 PAS fold JC776_01530 PF00512 His Kinase A (phospho-acceptor) domain JC776_01530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC776_01540 PF00905 Penicillin binding protein transpeptidase domain JC776_01540 PF00912 Transglycosylase JC776_01545 PF01865 Protein of unknown function DUF47 JC776_01550 PF01384 Phosphate transporter family JC776_01555 PF01925 Sulfite exporter TauE/SafE JC776_01570 PF00970 Oxidoreductase FAD-binding domain JC776_01570 PF00042 Globin JC776_01570 PF00175 Oxidoreductase NAD-binding domain JC776_01575 PF00665 Integrase core domain JC776_01575 PF13333 Integrase core domain JC776_01585 PF01238 Phosphomannose isomerase type I JC776_01590 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JC776_01590 PF02378 Phosphotransferase system, EIIC JC776_01590 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JC776_01595 PF08279 HTH domain JC776_01595 PF05043 Mga helix-turn-helix domain JC776_01595 PF00874 PRD domain JC776_01595 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JC776_01610 PF00232 Glycosyl hydrolase family 1 JC776_01615 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JC776_01615 PF00367 phosphotransferase system, EIIB JC776_01615 PF02378 Phosphotransferase system, EIIC JC776_01620 PF03123 CAT RNA binding domain JC776_01620 PF00874 PRD domain JC776_01650 PF00565 Staphylococcal nuclease homologue JC776_01650 PF02872 5'-nucleotidase, C-terminal domain JC776_01650 PF00746 LPXTG cell wall anchor motif JC776_01650 PF00149 Calcineurin-like phosphoesterase JC776_01655 PF05525 Branched-chain amino acid transport protein JC776_01660 PF00196 Bacterial regulatory proteins, luxR family JC776_01660 PF00072 Response regulator receiver domain JC776_01665 PF00672 HAMP domain JC776_01665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC776_01665 PF07730 Histidine kinase JC776_01670 PF09922 Cell wall-active antibiotics response 4TMS YvqF JC776_01685 PF03553 Na+/H+ antiporter family JC776_01690 PF04167 Protein of unknown function (DUF402) JC776_01695 PF00375 Sodium:dicarboxylate symporter family JC776_01705 PF00209 Sodium:neurotransmitter symporter family JC776_01710 PF14824 Sirohaem biosynthesis protein central JC776_01710 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JC776_01710 PF10414 Sirohaem synthase dimerisation region JC776_01715 PF01903 CbiX JC776_01720 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JC776_01730 PF01077 Nitrite and sulphite reductase 4Fe-4S domain JC776_01730 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain JC776_01740 PF01747 ATP-sulfurylase JC776_01740 PF14306 PUA-like domain JC776_01745 PF01507 Phosphoadenosine phosphosulfate reductase family JC776_01755 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain JC776_01755 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain JC776_01765 PF00884 Sulfatase JC776_01770 PF01066 CDP-alcohol phosphatidyltransferase JC776_01775 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JC776_01775 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JC776_01785 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase JC776_01790 PF01502 Phosphoribosyl-AMP cyclohydrolase JC776_01795 PF00977 Histidine biosynthesis protein JC776_01800 PF00977 Histidine biosynthesis protein JC776_01805 PF00117 Glutamine amidotransferase class-I JC776_01810 PF00475 Imidazoleglycerol-phosphate dehydratase JC776_01815 PF00815 Histidinol dehydrogenase JC776_01820 PF01634 ATP phosphoribosyltransferase JC776_01825 PF13393 Histidyl-tRNA synthetase JC776_01830 PF00694 Aconitase C-terminal domain JC776_01835 PF00330 Aconitase family (aconitate hydratase) JC776_01840 PF00180 Isocitrate/isopropylmalate dehydrogenase JC776_01845 PF00682 HMGL-like JC776_01845 PF08502 LeuA allosteric (dimerisation) domain JC776_01850 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain JC776_01850 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain JC776_01855 PF10369 Small subunit of acetolactate synthase JC776_01855 PF01842 ACT domain JC776_01860 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JC776_01860 PF00205 Thiamine pyrophosphate enzyme, central domain JC776_01860 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JC776_01870 PF03698 Uncharacterised protein family (UPF0180) JC776_01885 PF09579 Sporulation protein YtfJ (Spore_YtfJ) JC776_01895 PF02386 Cation transport protein JC776_01900 PF00375 Sodium:dicarboxylate symporter family JC776_01910 PF01047 MarR family JC776_01920 PF02673 Bacitracin resistance protein BacA JC776_01925 PF01554 MatE JC776_01935 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) JC776_01940 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus JC776_01940 PF00361 Proton-conducting membrane transporter JC776_01945 PF10057 Uncharacterized conserved protein (DUF2294) JC776_01955 PF01636 Phosphotransferase enzyme family JC776_01965 PF00884 Sulfatase JC776_01990 PF00258 Flavodoxin JC776_01995 PF07687 Peptidase dimerisation domain JC776_01995 PF01546 Peptidase family M20/M25/M40 JC776_02005 PF00501 AMP-binding enzyme JC776_02005 PF13193 AMP-binding enzyme C-terminal domain JC776_02010 PF03062 MBOAT, membrane-bound O-acyltransferase family JC776_02015 PF00550 Phosphopantetheine attachment site JC776_02020 PF04914 DltD protein JC776_02025 PF03060 Nitronate monooxygenase JC776_02030 PF17676 LD-carboxypeptidase C-terminal domain JC776_02030 PF02016 LD-carboxypeptidase N-terminal domain JC776_02045 PF01037 Lrp/AsnC ligand binding domain JC776_02065 PF00005 ABC transporter JC776_02075 PF00005 ABC transporter JC776_02080 PF00392 Bacterial regulatory proteins, gntR family JC776_02085 PF00268 Ribonucleotide reductase, small chain JC776_02100 PF07972 NrdI Flavodoxin like JC776_02115 PF00583 Acetyltransferase (GNAT) family JC776_02125 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) JC776_02130 PF14489 QueF-like protein JC776_02135 PF04055 Radical SAM superfamily JC776_02140 PF01242 6-pyruvoyl tetrahydropterin synthase JC776_02145 PF06508 Queuosine biosynthesis protein QueC JC776_02160 PF01047 MarR family JC776_02165 PF00512 His Kinase A (phospho-acceptor) domain JC776_02165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC776_02165 PF02743 Cache domain JC776_02170 PF09388 Spo0E like sporulation regulatory protein JC776_02175 PF04748 Divergent polysaccharide deacetylase JC776_02185 PF00596 Class II Aldolase and Adducin N-terminal domain JC776_02190 PF08220 DeoR-like helix-turn-helix domain JC776_02190 PF00455 DeoR C terminal sensor domain JC776_02195 PF00266 Aminotransferase class-V JC776_02200 PF13419 Haloacid dehalogenase-like hydrolase JC776_02205 PF00528 Binding-protein-dependent transport system inner membrane component JC776_02210 PF00005 ABC transporter JC776_02210 PF08402 TOBE domain JC776_02230 PF02386 Cation transport protein JC776_02235 PF00561 alpha/beta hydrolase fold JC776_02260 PF01575 MaoC like domain JC776_02265 PF00269 Small, acid-soluble spore proteins, alpha/beta type JC776_02270 PF02386 Cation transport protein JC776_02275 PF03741 Integral membrane protein TerC family JC776_02280 PF01226 Formate/nitrite transporter JC776_02295 PF01609 Transposase DDE domain JC776_02305 PF00144 Beta-lactamase JC776_02305 PF11954 Domain of unknown function (DUF3471) JC776_02310 PF00561 alpha/beta hydrolase fold JC776_02320 PF03009 Glycerophosphoryl diester phosphodiesterase family JC776_02325 PF06750 Bacterial Peptidase A24 N-terminal domain JC776_02325 PF01478 Type IV leader peptidase family JC776_02330 PF02589 LUD domain JC776_02335 PF02589 LUD domain JC776_02335 PF13183 4Fe-4S dicluster domain JC776_02335 PF11870 Domain of unknown function (DUF3390) JC776_02340 PF02754 Cysteine-rich domain JC776_02345 PF07729 FCD domain JC776_02345 PF00392 Bacterial regulatory proteins, gntR family JC776_02350 PF00512 His Kinase A (phospho-acceptor) domain JC776_02350 PF00989 PAS fold JC776_02350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC776_02350 PF16736 Single Cache-like JC776_02355 PF00072 Response regulator receiver domain JC776_02355 PF00486 Transcriptional regulatory protein, C terminal JC776_02365 PF13556 PucR C-terminal helix-turn-helix domain JC776_02365 PF05651 Putative sugar diacid recognition JC776_02365 PF17853 GGDEF-like domain JC776_02370 PF02913 FAD linked oxidases, C-terminal domain JC776_02370 PF01565 FAD binding domain JC776_02375 PF02754 Cysteine-rich domain JC776_02375 PF13183 4Fe-4S dicluster domain JC776_02380 PF00188 Cysteine-rich secretory protein family JC776_02390 PF01479 S4 domain JC776_02390 PF00849 RNA pseudouridylate synthase JC776_02400 PF03176 MMPL family JC776_02405 PF01569 PAP2 superfamily JC776_02410 PF13416 Bacterial extracellular solute-binding protein JC776_02415 PF00528 Binding-protein-dependent transport system inner membrane component JC776_02420 PF00528 Binding-protein-dependent transport system inner membrane component JC776_02425 PF00005 ABC transporter JC776_02425 PF08402 TOBE domain JC776_02430 PF00171 Aldehyde dehydrogenase family JC776_02435 PF05547 Immune inhibitor A peptidase M6 JC776_02445 PF01381 Helix-turn-helix JC776_02445 PF08671 Anti-repressor SinI JC776_02450 PF12389 Camelysin metallo-endopeptidase JC776_02470 PF00768 D-alanyl-D-alanine carboxypeptidase JC776_02470 PF07943 Penicillin-binding protein 5, C-terminal domain JC776_02495 PF00589 Phage integrase family JC776_02495 PF14659 Phage integrase, N-terminal SAM-like domain JC776_02530 PF18593 CdiI immunity protein JC776_02545 PF00589 Phage integrase family JC776_02545 PF14659 Phage integrase, N-terminal SAM-like domain JC776_02550 PF18801 response regulator aspartate phosphatase H, N terminal JC776_02580 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JC776_02640 PF00293 NUDIX domain JC776_02650 PF18801 response regulator aspartate phosphatase H, N terminal JC776_02655 PF02962 5-carboxymethyl-2-hydroxymuconate isomerase JC776_02660 PF01557 Fumarylacetoacetate (FAA) hydrolase family JC776_02665 PF01557 Fumarylacetoacetate (FAA) hydrolase family JC776_02670 PF00474 Sodium:solute symporter family JC776_02675 PF04341 Protein of unknown function, DUF485 JC776_02680 PF01687 Riboflavin kinase JC776_02680 PF06574 FAD synthetase JC776_02685 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JC776_02690 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal JC776_02690 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal JC776_02695 PF00171 Aldehyde dehydrogenase family JC776_02700 PF00701 Dihydrodipicolinate synthetase family JC776_02705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JC776_02705 PF03466 LysR substrate binding domain JC776_02715 PF02779 Transketolase, pyrimidine binding domain JC776_02715 PF00676 Dehydrogenase E1 component JC776_02715 PF16870 2-oxoglutarate dehydrogenase C-terminal JC776_02720 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JC776_02720 PF00364 Biotin-requiring enzyme JC776_02720 PF02817 e3 binding domain JC776_02745 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JC776_02745 PF07992 Pyridine nucleotide-disulphide oxidoreductase JC776_02760 PF10042 Uncharacterized conserved protein (DUF2278) JC776_02765 PF02652 L-lactate permease JC776_02775 PF00474 Sodium:solute symporter family JC776_02780 PF02368 Bacterial Ig-like domain (group 2) JC776_02795 PF00756 Putative esterase JC776_02810 PF00580 UvrD/REP helicase N-terminal domain JC776_02810 PF13361 UvrD-like helicase C-terminal domain JC776_02825 PF04321 RmlD substrate binding domain JC776_02830 PF16363 GDP-mannose 4,6 dehydratase JC776_02835 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase JC776_02840 PF00483 Nucleotidyl transferase JC776_02860 PF00535 Glycosyl transferase family 2 JC776_02860 PF13181 Tetratricopeptide repeat JC776_02870 PF05711 Macrocin-O-methyltransferase (TylF) JC776_02875 PF08241 Methyltransferase domain JC776_02880 PF00535 Glycosyl transferase family 2 JC776_02890 PF07098 Protein of unknown function (DUF1360) JC776_02895 PF10612 Spore coat protein Z JC776_02925 PF01098 Cell cycle protein JC776_02930 PF00149 Calcineurin-like phosphoesterase JC776_02940 PF00849 RNA pseudouridylate synthase JC776_02945 PF01513 ATP-NAD kinase JC776_02950 PF04607 Region found in RelA / SpoT proteins JC776_02960 PF01928 CYTH domain JC776_02965 PF01152 Bacterial-like globin JC776_02975 PF08439 Oligopeptidase F JC776_02975 PF01432 Peptidase family M3 JC776_02985 PF13091 PLD-like domain JC776_02985 PF13396 Phospholipase_D-nuclease N-terminal JC776_02990 PF05389 Negative regulator of genetic competence (MecA) JC776_02995 PF03741 Integral membrane protein TerC family JC776_03000 PF03960 ArsC family JC776_03010 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JC776_03015 PF01554 MatE JC776_03020 PF00005 ABC transporter JC776_03020 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JC776_03025 PF00005 ABC transporter JC776_03025 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JC776_03030 PF00528 Binding-protein-dependent transport system inner membrane component JC776_03030 PF12911 N-terminal TM domain of oligopeptide transport permease C JC776_03035 PF00528 Binding-protein-dependent transport system inner membrane component JC776_03040 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JC776_03050 PF00579 tRNA synthetases class I (W and Y) JC776_03055 PF12227 Protein of unknown function (DUF3603) JC776_03060 PF10026 Predicted Zn-dependent protease (DUF2268) JC776_03065 PF02801 Beta-ketoacyl synthase, C-terminal domain JC776_03065 PF00109 Beta-ketoacyl synthase, N-terminal domain JC776_03070 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III JC776_03070 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal JC776_03075 PF10815 ComZ JC776_03095 PF00004 ATPase family associated with various cellular activities (AAA) JC776_03095 PF10431 C-terminal, D2-small domain, of ClpB protein JC776_03095 PF02861 Clp amino terminal domain, pathogenicity island component JC776_03095 PF07724 AAA domain (Cdc48 subfamily) JC776_03095 PF17871 AAA lid domain JC776_03100 PF14168 YjzC-like protein JC776_03120 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JC776_03120 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JC776_03135 PF17783 CvfB-like winged helix domain JC776_03135 PF13509 S1 domain JC776_03140 PF04461 Protein of unknown function (DUF520) JC776_03145 PF03423 Carbohydrate binding domain (family 25) JC776_03145 PF01373 Glycosyl hydrolase family 14 JC776_03145 PF00128 Alpha amylase, catalytic domain JC776_03150 PF06628 Catalase-related immune-responsive JC776_03150 PF00199 Catalase JC776_03155 PF00762 Ferrochelatase JC776_03160 PF00733 Asparagine synthase JC776_03160 PF13537 Glutamine amidotransferase domain JC776_03170 PF07457 Protein of unknown function (DUF1516) JC776_03175 PF00202 Aminotransferase class-III JC776_03180 PF01557 Fumarylacetoacetate (FAA) hydrolase family JC776_03185 PF09388 Spo0E like sporulation regulatory protein JC776_03190 PF10676 Spore germination protein gerPA/gerPF JC776_03195 PF10803 Spore germination GerPB JC776_03200 PF10737 Spore germination protein GerPC JC776_03210 PF10970 Spore germination protein GerPE JC776_03215 PF10676 Spore germination protein gerPA/gerPF JC776_03220 PF13361 UvrD-like helicase C-terminal domain JC776_03220 PF00580 UvrD/REP helicase N-terminal domain JC776_03220 PF12705 PD-(D/E)XK nuclease superfamily JC776_03225 PF13361 UvrD-like helicase C-terminal domain JC776_03225 PF12705 PD-(D/E)XK nuclease superfamily JC776_03230 PF10502 Signal peptidase, peptidase S26 JC776_03235 PF09335 SNARE associated Golgi protein JC776_03240 PF06338 ComK protein JC776_03245 PF00313 'Cold-shock' DNA-binding domain JC776_03250 PF00463 Isocitrate lyase family JC776_03255 PF01274 Malate synthase JC776_03270 PF00892 EamA-like transporter family JC776_03275 PF00672 HAMP domain JC776_03275 PF02743 Cache domain JC776_03275 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JC776_03280 PF01435 Peptidase family M48 JC776_03280 PF16491 CAAX prenyl protease N-terminal, five membrane helices JC776_03300 PF00486 Transcriptional regulatory protein, C terminal JC776_03300 PF00072 Response regulator receiver domain JC776_03305 PF00512 His Kinase A (phospho-acceptor) domain JC776_03305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC776_03315 PF07968 Leukocidin/Hemolysin toxin family JC776_03320 PF13193 AMP-binding enzyme C-terminal domain JC776_03320 PF00501 AMP-binding enzyme JC776_03325 PF03099 Biotin/lipoate A/B protein ligase family JC776_03325 PF10437 Bacterial lipoate protein ligase C-terminus JC776_03330 PF12706 Beta-lactamase superfamily domain JC776_03335 PF14149 YhfH-like protein JC776_03340 PF00356 Bacterial regulatory proteins, lacI family JC776_03350 PF00535 Glycosyl transferase family 2 JC776_03360 PF17932 Tetracyclin repressor-like, C-terminal domain JC776_03360 PF00440 Bacterial regulatory proteins, tetR family JC776_03390 PF01593 Flavin containing amine oxidoreductase JC776_03395 PF00762 Ferrochelatase JC776_03400 PF01208 Uroporphyrinogen decarboxylase (URO-D) JC776_03405 PF00905 Penicillin binding protein transpeptidase domain JC776_03405 PF00912 Transglycosylase JC776_03410 PF03992 Antibiotic biosynthesis monooxygenase JC776_03420 PF03703 Bacterial PH domain JC776_03430 PF01047 MarR family JC776_03435 PF12787 EcsC protein family JC776_03440 PF05975 Bacterial ABC transporter protein EcsB JC776_03445 PF00005 ABC transporter JC776_03450 PF01230 HIT domain JC776_03455 PF12732 YtxH-like protein JC776_03460 PF01047 MarR family JC776_03480 PF16901 C-terminal domain of alpha-glycerophosphate oxidase JC776_03480 PF01266 FAD dependent oxidoreductase JC776_03485 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JC776_03485 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JC776_03490 PF00230 Major intrinsic protein JC776_03495 PF04309 Glycerol-3-phosphate responsive antiterminator JC776_03500 PF14147 Sporulation protein YhaL JC776_03505 PF03816 Cell envelope-related transcriptional attenuator domain JC776_03515 PF00486 Transcriptional regulatory protein, C terminal JC776_03515 PF00072 Response regulator receiver domain JC776_03520 PF00989 PAS fold JC776_03520 PF16736 Single Cache-like JC776_03520 PF00512 His Kinase A (phospho-acceptor) domain JC776_03520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC776_03525 PF00005 ABC transporter JC776_03530 PF12704 MacB-like periplasmic core domain JC776_03530 PF02687 FtsX-like permease family JC776_03535 PF01336 OB-fold nucleic acid binding domain JC776_03535 PF01966 HD domain JC776_03540 PF13514 AAA domain JC776_03545 PF00149 Calcineurin-like phosphoesterase JC776_03560 PF11121 Protein of unknown function (DUF2639) JC776_03575 PF01906 Putative heavy-metal-binding JC776_03580 PF02733 Dak1 domain JC776_03590 PF00232 Glycosyl hydrolase family 1 JC776_03595 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JC776_03595 PF00367 phosphotransferase system, EIIB JC776_03595 PF02378 Phosphotransferase system, EIIC JC776_03600 PF03123 CAT RNA binding domain JC776_03600 PF00874 PRD domain JC776_03615 PF12996 DUF based on E. rectale Gene description (DUF3880) JC776_03625 PF00483 Nucleotidyl transferase JC776_03630 PF16363 GDP-mannose 4,6 dehydratase JC776_03635 PF08421 Putative zinc binding domain JC776_03635 PF08484 C-methyltransferase C-terminal domain JC776_03640 PF16363 GDP-mannose 4,6 dehydratase JC776_03660 PF05853 beta-keto acid cleavage enzyme JC776_03665 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JC776_03665 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JC776_03675 PF08240 Alcohol dehydrogenase GroES-like domain JC776_03675 PF00107 Zinc-binding dehydrogenase JC776_03685 PF00474 Sodium:solute symporter family JC776_03695 PF00180 Isocitrate/isopropylmalate dehydrogenase JC776_03700 PF00171 Aldehyde dehydrogenase family JC776_03705 PF00355 Rieske [2Fe-2S] domain JC776_03705 PF00848 Ring hydroxylating alpha subunit (catalytic domain) JC776_03710 PF13188 PAS domain JC776_03710 PF02954 Bacterial regulatory protein, Fis family JC776_03710 PF00158 Sigma-54 interaction domain JC776_03720 PF04851 Type III restriction enzyme, res subunit JC776_03720 PF00271 Helicase conserved C-terminal domain JC776_03730 PF08463 EcoEI R protein C-terminal JC776_03730 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) JC776_03730 PF04851 Type III restriction enzyme, res subunit JC776_03730 PF00271 Helicase conserved C-terminal domain JC776_03735 PF00293 NUDIX domain JC776_03755 PF00580 UvrD/REP helicase N-terminal domain JC776_03755 PF13361 UvrD-like helicase C-terminal domain JC776_03780 PF00005 ABC transporter JC776_03820 PF01381 Helix-turn-helix JC776_03840 PF01609 Transposase DDE domain JC776_03925 PF01235 Sodium:alanine symporter family JC776_03930 PF01098 Cell cycle protein JC776_03935 PF00571 CBS domain JC776_03935 PF01769 Divalent cation transporter JC776_03935 PF03448 MgtE intracellular N domain JC776_03940 PF01520 N-acetylmuramoyl-L-alanine amidase JC776_03940 PF00395 S-layer homology domain JC776_03945 PF01520 N-acetylmuramoyl-L-alanine amidase JC776_03945 PF00395 S-layer homology domain JC776_03950 PF05343 M42 glutamyl aminopeptidase JC776_03960 PF00378 Enoyl-CoA hydratase/isomerase JC776_03975 PF03062 MBOAT, membrane-bound O-acyltransferase family JC776_03980 PF03062 MBOAT, membrane-bound O-acyltransferase family JC776_03990 PF00395 S-layer homology domain JC776_03995 PF00395 S-layer homology domain JC776_03995 PF02368 Bacterial Ig-like domain (group 2) JC776_03995 PF13205 Bacterial Ig-like domain JC776_04005 PF01943 Polysaccharide biosynthesis protein JC776_04005 PF14667 Polysaccharide biosynthesis C-terminal domain JC776_04010 PF07517 SecA DEAD-like domain JC776_04010 PF01043 SecA preprotein cross-linking domain JC776_04010 PF07516 SecA Wing and Scaffold domain JC776_04030 PF13193 AMP-binding enzyme C-terminal domain JC776_04030 PF00501 AMP-binding enzyme JC776_04035 PF04055 Radical SAM superfamily JC776_04050 PF02245 Methylpurine-DNA glycosylase (MPG) JC776_04110 PF00196 Bacterial regulatory proteins, luxR family JC776_04110 PF00072 Response regulator receiver domain JC776_04115 PF07730 Histidine kinase JC776_04115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC776_04120 PF06133 Control of competence regulator ComK, YlbF/YmcA JC776_04125 PF04286 Protein of unknown function (DUF445) JC776_04130 PF14398 YheC/D like ATP-grasp JC776_04140 PF00269 Small, acid-soluble spore proteins, alpha/beta type JC776_04145 PF00005 ABC transporter JC776_04150 PF00528 Binding-protein-dependent transport system inner membrane component JC776_04155 PF00497 Bacterial extracellular solute-binding proteins, family 3 JC776_04160 PF00664 ABC transporter transmembrane region JC776_04160 PF00005 ABC transporter JC776_04165 PF00005 ABC transporter JC776_04165 PF00664 ABC transporter transmembrane region JC776_04170 PF00171 Aldehyde dehydrogenase family JC776_04180 PF13520 Amino acid permease JC776_04190 PF01037 Lrp/AsnC ligand binding domain JC776_04195 PF00892 EamA-like transporter family JC776_04225 PF00367 phosphotransferase system, EIIB JC776_04225 PF02378 Phosphotransferase system, EIIC JC776_04230 PF13580 SIS domain JC776_04240 PF01418 Helix-turn-helix domain, rpiR family JC776_04240 PF01380 SIS domain JC776_04245 PF00999 Sodium/hydrogen exchanger family JC776_04290 PF11007 Spore coat associated protein JA (CotJA) JC776_04295 PF12652 CotJB protein JC776_04300 PF05067 Manganese containing catalase JC776_04305 PF05525 Branched-chain amino acid transport protein JC776_04315 PF00005 ABC transporter JC776_04320 PF02687 FtsX-like permease family JC776_04320 PF12704 MacB-like periplasmic core domain JC776_04330 PF07690 Major Facilitator Superfamily JC776_04335 PF02690 Na+/Pi-cotransporter JC776_04340 PF03816 Cell envelope-related transcriptional attenuator domain JC776_04350 PF04293 SpoVR like protein JC776_04360 PF00881 Nitroreductase family JC776_04365 PF03323 Bacillus/Clostridium GerA spore germination protein JC776_04375 PF03845 Spore germination protein JC776_04385 PF14148 YhdB-like protein JC776_04390 PF03816 Cell envelope-related transcriptional attenuator domain JC776_04395 PF02600 Disulfide bond formation protein DsbB JC776_04400 PF00085 Thioredoxin JC776_04415 PF03734 L,D-transpeptidase catalytic domain JC776_04425 PF00860 Permease family JC776_04435 PF01047 MarR family JC776_04460 PF01475 Ferric uptake regulator family JC776_04465 PF02796 Helix-turn-helix domain of resolvase JC776_04465 PF00239 Resolvase, N terminal domain JC776_04470 PF00293 NUDIX domain JC776_04470 PF09297 NADH pyrophosphatase zinc ribbon domain JC776_04480 PF00589 Phage integrase family JC776_04480 PF02899 Phage integrase, N-terminal SAM-like domain JC776_04485 PF02899 Phage integrase, N-terminal SAM-like domain JC776_04485 PF00589 Phage integrase family JC776_04490 PF02702 Osmosensitive K+ channel His kinase sensor domain JC776_04495 PF02669 K+-transporting ATPase, c chain JC776_04505 PF03814 Potassium-transporting ATPase A subunit JC776_04530 PF08543 Phosphomethylpyrimidine kinase JC776_04535 PF00899 ThiF family JC776_04540 PF05690 Thiazole biosynthesis protein ThiG JC776_04545 PF02597 ThiS family JC776_04550 PF01266 FAD dependent oxidoreductase JC776_04555 PF02581 Thiamine monophosphate synthase JC776_04560 PF09084 NMT1/THI5 like JC776_04565 PF00528 Binding-protein-dependent transport system inner membrane component JC776_04570 PF00005 ABC transporter JC776_04575 PF03070 TENA/THI-4/PQQC family JC776_04590 PF08239 Bacterial SH3 domain JC776_04590 PF00246 Zinc carboxypeptidase JC776_04605 PF00571 CBS domain JC776_04690 PF05698 Bacterial trigger factor protein (TF) C-terminus JC776_04690 PF05697 Bacterial trigger factor protein (TF) JC776_04730 PF00873 AcrB/AcrD/AcrF family JC776_04735 PF00528 Binding-protein-dependent transport system inner membrane component JC776_04740 PF00528 Binding-protein-dependent transport system inner membrane component JC776_04745 PF12849 PBP superfamily domain JC776_04750 PF04023 FeoA domain JC776_04750 PF07664 Ferrous iron transport protein B C terminus JC776_04750 PF17910 FeoB cytosolic helical domain JC776_04750 PF02421 Ferrous iron transport protein B JC776_04750 PF07670 Nucleoside recognition JC776_04755 PF07664 Ferrous iron transport protein B C terminus JC776_04755 PF17910 FeoB cytosolic helical domain JC776_04755 PF02421 Ferrous iron transport protein B JC776_04755 PF07670 Nucleoside recognition JC776_04760 PF07670 Nucleoside recognition JC776_04760 PF02421 Ferrous iron transport protein B JC776_04760 PF07664 Ferrous iron transport protein B C terminus JC776_04760 PF17910 FeoB cytosolic helical domain JC776_04770 PF05504 Spore germination B3/ GerAC like, C-terminal JC776_04775 PF03845 Spore germination protein JC776_04780 PF03323 Bacillus/Clostridium GerA spore germination protein JC776_04785 PF00474 Sodium:solute symporter family JC776_04795 PF07687 Peptidase dimerisation domain JC776_04795 PF01546 Peptidase family M20/M25/M40 JC776_04800 PF13529 Peptidase_C39 like family JC776_04805 PF00324 Amino acid permease JC776_04810 PF02790 Cytochrome C oxidase subunit II, transmembrane domain JC776_04815 PF00115 Cytochrome C and Quinol oxidase polypeptide I JC776_04820 PF00510 Cytochrome c oxidase subunit III JC776_04830 PF02254 TrkA-N domain JC776_04830 PF02080 TrkA-C domain JC776_04830 PF00999 Sodium/hydrogen exchanger family JC776_04840 PF13673 Acetyltransferase (GNAT) domain JC776_04845 PF00324 Amino acid permease JC776_04855 PF05525 Branched-chain amino acid transport protein JC776_04875 PF04203 Sortase domain JC776_04890 PF01381 Helix-turn-helix JC776_04895 PF06725 3D domain JC776_04895 PF01476 LysM domain JC776_04900 PF02743 Cache domain JC776_04900 PF00672 HAMP domain JC776_04900 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JC776_04905 PF02673 Bacitracin resistance protein BacA JC776_04925 PF03372 Endonuclease/Exonuclease/phosphatase family JC776_04930 PF00882 Zinc dependent phospholipase C JC776_04955 PF06013 Proteins of 100 residues with WXG JC776_04965 PF00923 Transaldolase/Fructose-6-phosphate aldolase JC776_04970 PF13407 Periplasmic binding protein domain JC776_04975 PF02653 Branched-chain amino acid transport system / permease component JC776_04980 PF00005 ABC transporter JC776_04985 PF05025 RbsD / FucU transport protein family JC776_04990 PF00294 pfkB family carbohydrate kinase JC776_04995 PF00356 Bacterial regulatory proteins, lacI family JC776_05000 PF07690 Major Facilitator Superfamily JC776_05005 PF01047 MarR family JC776_05010 PF07690 Major Facilitator Superfamily JC776_05015 PF00005 ABC transporter JC776_05015 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JC776_05020 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JC776_05020 PF00005 ABC transporter JC776_05025 PF00528 Binding-protein-dependent transport system inner membrane component JC776_05030 PF00528 Binding-protein-dependent transport system inner membrane component JC776_05035 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JC776_05045 PF00582 Universal stress protein family JC776_05050 PF00916 Sulfate permease family JC776_05050 PF01740 STAS domain JC776_05060 PF00486 Transcriptional regulatory protein, C terminal JC776_05060 PF00072 Response regulator receiver domain JC776_05065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC776_05065 PF00672 HAMP domain JC776_05065 PF00989 PAS fold JC776_05065 PF00512 His Kinase A (phospho-acceptor) domain JC776_05065 PF18698 Histidine kinase sensor domain JC776_05075 PF00324 Amino acid permease JC776_05080 PF00528 Binding-protein-dependent transport system inner membrane component JC776_05085 PF00528 Binding-protein-dependent transport system inner membrane component JC776_05090 PF00497 Bacterial extracellular solute-binding proteins, family 3 JC776_05095 PF00005 ABC transporter JC776_05100 PF01235 Sodium:alanine symporter family JC776_05105 PF01636 Phosphotransferase enzyme family JC776_05110 PF13520 Amino acid permease JC776_05115 PF07728 AAA domain (dynein-related subfamily) JC776_05120 PF00092 von Willebrand factor type A domain JC776_05125 PF00293 NUDIX domain JC776_05125 PF13344 Haloacid dehalogenase-like hydrolase JC776_05130 PF01370 NAD dependent epimerase/dehydratase family JC776_05135 PF00155 Aminotransferase class I and II JC776_05140 PF00854 POT family JC776_05145 PF08141 Small acid-soluble spore protein H family JC776_05150 PF01022 Bacterial regulatory protein, arsR family JC776_05155 PF02652 L-lactate permease JC776_05160 PF00206 Lyase JC776_05160 PF10415 Fumarase C C-terminus JC776_05165 PF01595 Cyclin M transmembrane N-terminal domain JC776_05165 PF03471 Transporter associated domain JC776_05165 PF00571 CBS domain JC776_05175 PF03816 Cell envelope-related transcriptional attenuator domain JC776_05180 PF04294 VanW like protein JC776_05195 PF00403 Heavy-metal-associated domain JC776_05200 PF00403 Heavy-metal-associated domain JC776_05215 PF02868 Thermolysin metallopeptidase, alpha-helical domain JC776_05215 PF01447 Thermolysin metallopeptidase, catalytic domain JC776_05215 PF03413 Peptidase propeptide and YPEB domain JC776_05215 PF07504 Fungalysin/Thermolysin Propeptide Motif JC776_05230 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain JC776_05230 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain JC776_05230 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family JC776_05235 PF00403 Heavy-metal-associated domain JC776_05240 PF01022 Bacterial regulatory protein, arsR family JC776_05250 PF13520 Amino acid permease JC776_05255 PF01262 Alanine dehydrogenase/PNT, C-terminal domain JC776_05255 PF05222 Alanine dehydrogenase/PNT, N-terminal domain JC776_05260 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JC776_05260 PF12729 Four helix bundle sensory module for signal transduction JC776_05260 PF00672 HAMP domain JC776_05270 PF07849 Protein of unknown function (DUF1641) JC776_05275 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JC776_05275 PF00384 Molybdopterin oxidoreductase JC776_05275 PF01568 Molydopterin dinucleotide binding domain JC776_05275 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region JC776_05275 PF00037 4Fe-4S binding domain JC776_05280 PF02634 FdhD/NarQ family JC776_05285 PF00072 Response regulator receiver domain JC776_05285 PF00486 Transcriptional regulatory protein, C terminal JC776_05290 PF18698 Histidine kinase sensor domain JC776_05290 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC776_05290 PF00512 His Kinase A (phospho-acceptor) domain JC776_05290 PF00989 PAS fold JC776_05290 PF00672 HAMP domain JC776_05305 PF00390 Malic enzyme, N-terminal domain JC776_05305 PF03949 Malic enzyme, NAD binding domain JC776_05310 PF03390 2-hydroxycarboxylate transporter family JC776_05315 PF00072 Response regulator receiver domain JC776_05320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC776_05320 PF17203 Single cache domain 3 JC776_05320 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain JC776_05320 PF00989 PAS fold JC776_05325 PF00672 HAMP domain JC776_05325 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JC776_05325 PF02743 Cache domain JC776_05330 PF13529 Peptidase_C39 like family JC776_05360 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JC776_05360 PF00672 HAMP domain JC776_05360 PF02743 Cache domain JC776_05365 PF15975 Flotillin JC776_05365 PF01145 SPFH domain / Band 7 family JC776_05375 PF08453 Peptidase family M9 N-terminal JC776_05375 PF01752 Collagenase JC776_05375 PF18496 Collagenase G catalytic helper subdomain JC776_05380 PF02028 BCCT, betaine/carnitine/choline family transporter JC776_05385 PF00395 S-layer homology domain JC776_05410 PF01979 Amidohydrolase family JC776_05415 PF01411 tRNA synthetases class II (A) JC776_05415 PF02272 DHHA1 domain JC776_05415 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JC776_05425 PF01810 LysE type translocator JC776_05440 PF04285 Protein of unknown function (DUF444) JC776_05445 PF08298 PrkA AAA domain JC776_05445 PF06798 PrkA serine protein kinase C-terminal domain JC776_05450 PF00588 SpoU rRNA Methylase family JC776_05455 PF12671 Putative amidase domain JC776_05460 PF08331 Domain of unknown function (DUF1730) JC776_05470 PF13462 Thioredoxin JC776_05475 PF00912 Transglycosylase JC776_05475 PF00905 Penicillin binding protein transpeptidase domain JC776_05480 PF01709 Transcriptional regulator JC776_05485 PF18801 response regulator aspartate phosphatase H, N terminal JC776_05505 PF05638 Type VI secretion system effector, Hcp JC776_05600 PF11023 Zinc-ribbon containing domain JC776_05605 PF01475 Ferric uptake regulator family JC776_05610 PF00578 AhpC/TSA family JC776_05615 PF07885 Ion channel JC776_05630 PF00005 ABC transporter JC776_05635 PF00202 Aminotransferase class-III JC776_05640 PF00310 Glutamine amidotransferases class-II JC776_05640 PF01645 Conserved region in glutamate synthase JC776_05640 PF01493 GXGXG motif JC776_05640 PF04898 Glutamate synthase central domain JC776_05645 PF06081 Aromatic acid exporter family member 1 JC776_05650 PF00664 ABC transporter transmembrane region JC776_05650 PF00005 ABC transporter JC776_05655 PF04167 Protein of unknown function (DUF402) JC776_05665 PF04259 Small, acid-soluble spore protein, gamma-type JC776_05675 PF00149 Calcineurin-like phosphoesterase JC776_05680 PF00730 HhH-GPD superfamily base excision DNA repair protein JC776_05680 PF14815 NUDIX domain JC776_05685 PF04307 LexA-binding, inner membrane-associated putative hydrolase JC776_05690 PF14043 WVELL protein JC776_05695 PF08176 Small acid-soluble spore protein K family JC776_05705 PF08838 Protein of unknown function (DUF1811) JC776_05710 PF02631 RecX family JC776_05715 PF01979 Amidohydrolase family JC776_05730 PF04101 Glycosyltransferase family 28 C-terminal domain JC776_05730 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase JC776_05735 PF04055 Radical SAM superfamily JC776_05740 PF01228 Glycine radical JC776_05740 PF02901 Pyruvate formate lyase-like JC776_05745 PF02911 Formyl transferase, C-terminal domain JC776_05745 PF00551 Formyl transferase JC776_05745 PF01370 NAD dependent epimerase/dehydratase family JC776_05750 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain JC776_05750 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain JC776_05750 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain JC776_05755 PF00144 Beta-lactamase JC776_05760 PF00367 phosphotransferase system, EIIB JC776_05760 PF02378 Phosphotransferase system, EIIC JC776_05765 PF04960 Glutaminase JC776_05790 PF01416 tRNA pseudouridine synthase JC776_05795 PF13408 Recombinase zinc beta ribbon domain JC776_05795 PF00239 Resolvase, N terminal domain JC776_05795 PF07508 Recombinase JC776_05820 PF01066 CDP-alcohol phosphatidyltransferase JC776_05840 PF01938 TRAM domain JC776_05840 PF05958 tRNA (Uracil-5-)-methyltransferase JC776_05845 PF00730 HhH-GPD superfamily base excision DNA repair protein JC776_05850 PF01522 Polysaccharide deacetylase JC776_05855 PF05681 Fumarate hydratase (Fumerase) JC776_05855 PF05683 Fumarase C-terminus JC776_05865 PF04055 Radical SAM superfamily JC776_05865 PF08756 YfkB-like domain JC776_05870 PF14167 YfkD-like protein JC776_05875 PF01699 Sodium/calcium exchanger protein JC776_05890 PF09335 SNARE associated Golgi protein JC776_05900 PF10502 Signal peptidase, peptidase S26 JC776_05910 PF00892 EamA-like transporter family JC776_05920 PF03631 Virulence factor BrkB JC776_05930 PF01451 Low molecular weight phosphotyrosine protein phosphatase JC776_05935 PF06569 Protein of unknown function (DUF1128) JC776_05945 PF05816 Toxic anion resistance protein (TelA) JC776_05950 PF14266 Putative component of 'biosynthetic module' JC776_05955 PF03741 Integral membrane protein TerC family JC776_05960 PF02342 TerD domain JC776_05965 PF02342 TerD domain JC776_05970 PF02342 TerD domain JC776_05975 PF00480 ROK family JC776_05980 PF03129 Anticodon binding domain JC776_05980 PF09180 Prolyl-tRNA synthetase, C-terminal JC776_05980 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JC776_05995 PF11700 Vacuole effluxer Atg22 like JC776_06000 PF13276 HTH-like domain JC776_06000 PF00665 Integrase core domain JC776_06000 PF13333 Integrase core domain JC776_06035 PF05791 Bacillus haemolytic enterotoxin (HBL) JC776_06065 PF00440 Bacterial regulatory proteins, tetR family JC776_06065 PF08360 QacR-like protein, C-terminal region JC776_06080 PF00704 Glycosyl hydrolases family 18 JC776_06080 PF00041 Fibronectin type III domain JC776_06085 PF00005 ABC transporter JC776_06095 PF00528 Binding-protein-dependent transport system inner membrane component JC776_06100 PF01910 Thiamine-binding protein JC776_06105 PF00975 Thioesterase domain JC776_06105 PF00550 Phosphopantetheine attachment site JC776_06105 PF00668 Condensation domain JC776_06105 PF13193 AMP-binding enzyme C-terminal domain JC776_06105 PF00501 AMP-binding enzyme JC776_06110 PF00672 HAMP domain JC776_06110 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JC776_06115 PF03605 Anaerobic c4-dicarboxylate membrane transporter JC776_06125 PF02581 Thiamine monophosphate synthase JC776_06130 PF02110 Hydroxyethylthiazole kinase family JC776_06135 PF01497 Periplasmic binding protein JC776_06140 PF00005 ABC transporter JC776_06145 PF01032 FecCD transport family JC776_06150 PF01032 FecCD transport family JC776_06155 PF01751 Toprim domain JC776_06155 PF01131 DNA topoisomerase JC776_06160 PF01061 ABC-2 type transporter JC776_06165 PF03372 Endonuclease/Exonuclease/phosphatase family JC776_06170 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JC776_06170 PF00367 phosphotransferase system, EIIB JC776_06170 PF02378 Phosphotransferase system, EIIC JC776_06175 PF16657 Maltogenic Amylase, C-terminal domain JC776_06175 PF00128 Alpha amylase, catalytic domain JC776_06185 PF00027 Cyclic nucleotide-binding domain JC776_06185 PF13545 Crp-like helix-turn-helix domain JC776_06190 PF00696 Amino acid kinase family JC776_06195 PF13520 Amino acid permease JC776_06200 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JC776_06200 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JC776_06210 PF01316 Arginine repressor, DNA binding domain JC776_06210 PF02863 Arginine repressor, C-terminal domain JC776_06220 PF00672 HAMP domain JC776_06220 PF12729 Four helix bundle sensory module for signal transduction JC776_06220 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JC776_06225 PF00005 ABC transporter JC776_06230 PF00497 Bacterial extracellular solute-binding proteins, family 3 JC776_06235 PF00528 Binding-protein-dependent transport system inner membrane component JC776_06245 PF01266 FAD dependent oxidoreductase JC776_06245 PF00355 Rieske [2Fe-2S] domain JC776_06250 PF07690 Major Facilitator Superfamily JC776_06255 PF10127 RNA repair pathway DNA polymerase beta family JC776_06285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC776_06285 PF00512 His Kinase A (phospho-acceptor) domain JC776_06285 PF00989 PAS fold JC776_06285 PF13188 PAS domain JC776_06285 PF13426 PAS domain JC776_06290 PF12728 Helix-turn-helix domain JC776_06300 PF07992 Pyridine nucleotide-disulphide oxidoreductase JC776_06305 PF01497 Periplasmic binding protein JC776_06310 PF01032 FecCD transport family JC776_06315 PF01032 FecCD transport family JC776_06340 PF00005 ABC transporter JC776_06355 PF07726 ATPase family associated with various cellular activities (AAA) JC776_06355 PF17863 AAA lid domain JC776_06375 PF01636 Phosphotransferase enzyme family JC776_06380 PF00578 AhpC/TSA family JC776_06385 PF13192 Thioredoxin domain JC776_06385 PF07992 Pyridine nucleotide-disulphide oxidoreductase JC776_06395 PF01207 Dihydrouridine synthase (Dus) JC776_06400 PF01938 TRAM domain JC776_06400 PF05958 tRNA (Uracil-5-)-methyltransferase JC776_06400 PF02475 Met-10+ like-protein JC776_06405 PF07670 Nucleoside recognition JC776_06405 PF07662 Na+ dependent nucleoside transporter C-terminus JC776_06405 PF01773 Na+ dependent nucleoside transporter N-terminus JC776_06415 PF02073 Thermophilic metalloprotease (M29) JC776_06420 PF00893 Small Multidrug Resistance protein JC776_06425 PF00171 Aldehyde dehydrogenase family JC776_06430 PF13520 Amino acid permease JC776_06435 PF00158 Sigma-54 interaction domain JC776_06440 PF00202 Aminotransferase class-III JC776_06445 PF13419 Haloacid dehalogenase-like hydrolase JC776_06455 PF00781 Diacylglycerol kinase catalytic domain JC776_06460 PF02637 GatB domain JC776_06460 PF02934 GatB/GatE catalytic domain JC776_06465 PF01425 Amidase JC776_06470 PF02686 Glu-tRNAGln amidotransferase C subunit JC776_06475 PF05360 yiaA/B two helix domain JC776_06490 PF03180 NLPA lipoprotein JC776_06495 PF00528 Binding-protein-dependent transport system inner membrane component JC776_06500 PF00005 ABC transporter JC776_06500 PF09383 NIL domain JC776_06505 PF00857 Isochorismatase family JC776_06510 PF00171 Aldehyde dehydrogenase family JC776_06515 PF01925 Sulfite exporter TauE/SafE JC776_06520 PF07537 CamS sex pheromone cAM373 precursor JC776_06525 PF01653 NAD-dependent DNA ligase adenylation domain JC776_06525 PF03120 NAD-dependent DNA ligase OB-fold domain JC776_06525 PF03119 NAD-dependent DNA ligase C4 zinc finger domain JC776_06525 PF12826 Helix-hairpin-helix motif JC776_06525 PF00533 BRCA1 C Terminus (BRCT) domain JC776_06530 PF00580 UvrD/REP helicase N-terminal domain JC776_06530 PF13361 UvrD-like helicase C-terminal domain JC776_06535 PF01884 PcrB family JC776_06555 PF03466 LysR substrate binding domain JC776_06555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JC776_06565 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain JC776_06565 PF02843 Phosphoribosylglycinamide synthetase, C domain JC776_06565 PF02844 Phosphoribosylglycinamide synthetase, N domain JC776_06570 PF02142 MGS-like domain JC776_06570 PF01808 AICARFT/IMPCHase bienzyme JC776_06575 PF00551 Formyl transferase JC776_06580 PF02769 AIR synthase related protein, C-terminal domain JC776_06580 PF00586 AIR synthase related protein, N-terminal domain JC776_06585 PF00156 Phosphoribosyl transferase domain JC776_06590 PF00586 AIR synthase related protein, N-terminal domain JC776_06590 PF02769 AIR synthase related protein, C-terminal domain JC776_06590 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain JC776_06600 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase JC776_06605 PF01259 SAICAR synthetase JC776_06610 PF10397 Adenylosuccinate lyase C-terminus JC776_06610 PF00206 Lyase JC776_06615 PF02222 ATP-grasp domain JC776_06615 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain JC776_06620 PF00731 AIR carboxylase JC776_06640 PF00892 EamA-like transporter family JC776_06660 PF00072 Response regulator receiver domain JC776_06660 PF00486 Transcriptional regulatory protein, C terminal JC776_06665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC776_06665 PF00512 His Kinase A (phospho-acceptor) domain JC776_06670 PF00005 ABC transporter JC776_06730 PF16736 Single Cache-like JC776_06730 PF00512 His Kinase A (phospho-acceptor) domain JC776_06730 PF00989 PAS fold JC776_06730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC776_06735 PF00072 Response regulator receiver domain JC776_06735 PF00486 Transcriptional regulatory protein, C terminal JC776_06740 PF00860 Permease family JC776_06745 PF00958 GMP synthase C terminal domain JC776_06745 PF02540 NAD synthase JC776_06745 PF00117 Glutamine amidotransferase class-I JC776_06750 PF00118 TCP-1/cpn60 chaperonin family JC776_06755 PF00166 Chaperonin 10 Kd subunit JC776_06760 PF02517 CPBP intramembrane metalloprotease JC776_06770 PF02629 CoA binding domain JC776_06770 PF06971 Putative DNA-binding protein N-terminus JC776_06775 PF00005 ABC transporter JC776_06775 PF16326 ABC transporter C-terminal domain JC776_06775 PF12848 ABC transporter JC776_06780 PF00814 Glycoprotease family JC776_06785 PF00583 Acetyltransferase (GNAT) family JC776_06790 PF00814 Glycoprotease family JC776_06795 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE JC776_06845 PF05697 Bacterial trigger factor protein (TF) JC776_06845 PF05698 Bacterial trigger factor protein (TF) C-terminus JC776_06885 PF10263 SprT-like family JC776_06895 PF17674 HHH domain JC776_06895 PF00575 S1 RNA binding domain JC776_06895 PF09371 Tex-like protein N-terminal domain JC776_06895 PF16921 Tex protein YqgF-like domain JC776_06900 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system JC776_06905 PF01402 Ribbon-helix-helix protein, copG family JC776_06910 PF00842 Alanine racemase, C-terminal domain JC776_06910 PF01168 Alanine racemase, N-terminal domain JC776_06920 PF01648 4'-phosphopantetheinyl transferase superfamily JC776_06925 PF01694 Rhomboid family JC776_06930 PF00270 DEAD/DEAH box helicase JC776_06930 PF00271 Helicase conserved C-terminal domain JC776_06935 PF01225 Mur ligase family, catalytic domain JC776_06935 PF02875 Mur ligase family, glutamate ligase domain JC776_06935 PF08245 Mur ligase middle domain JC776_06940 PF07478 D-ala D-ala ligase C-terminus JC776_06940 PF01820 D-ala D-ala ligase N-terminus JC776_06945 PF07690 Major Facilitator Superfamily JC776_06955 PF01557 Fumarylacetoacetate (FAA) hydrolase family JC776_06960 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JC776_06985 PF00005 ABC transporter JC776_06985 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JC776_06990 PF00005 ABC transporter JC776_06990 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JC776_06995 PF12911 N-terminal TM domain of oligopeptide transport permease C JC776_06995 PF00528 Binding-protein-dependent transport system inner membrane component JC776_07000 PF00528 Binding-protein-dependent transport system inner membrane component JC776_07005 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JC776_07025 PF00005 ABC transporter JC776_07030 PF00196 Bacterial regulatory proteins, luxR family JC776_07030 PF00072 Response regulator receiver domain JC776_07035 PF07730 Histidine kinase JC776_07060 PF18267 Rubredoxin NAD+ reductase C-terminal domain JC776_07060 PF07992 Pyridine nucleotide-disulphide oxidoreductase JC776_07060 PF04324 BFD-like [2Fe-2S] binding domain JC776_07060 PF01077 Nitrite and sulphite reductase 4Fe-4S domain JC776_07060 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain JC776_07065 PF00355 Rieske [2Fe-2S] domain JC776_07070 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JC776_07075 PF01903 CbiX JC776_07080 PF10414 Sirohaem synthase dimerisation region JC776_07080 PF14824 Sirohaem biosynthesis protein central JC776_07080 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JC776_07085 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JC776_07085 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JC776_07090 PF01553 Acyltransferase JC776_07095 PF12728 Helix-turn-helix domain JC776_07095 PF12727 PBP superfamily domain JC776_07105 PF00528 Binding-protein-dependent transport system inner membrane component JC776_07110 PF06800 Sugar transport protein JC776_07115 PF03807 NADP oxidoreductase coenzyme F420-dependent JC776_07115 PF14748 Pyrroline-5-carboxylate reductase dimerisation JC776_07120 PF00248 Aldo/keto reductase family JC776_07130 PF00440 Bacterial regulatory proteins, tetR family JC776_07140 PF12833 Helix-turn-helix domain JC776_07150 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JC776_07155 PF00005 ABC transporter JC776_07155 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JC776_07160 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JC776_07160 PF00005 ABC transporter JC776_07165 PF00528 Binding-protein-dependent transport system inner membrane component JC776_07165 PF12911 N-terminal TM domain of oligopeptide transport permease C JC776_07170 PF00528 Binding-protein-dependent transport system inner membrane component JC776_07180 PF07690 Major Facilitator Superfamily JC776_07190 PF01385 Probable transposase JC776_07190 PF07282 Putative transposase DNA-binding domain JC776_07190 PF12323 Helix-turn-helix domain JC776_07210 PF03313 Serine dehydratase alpha chain JC776_07215 PF03313 Serine dehydratase alpha chain JC776_07220 PF00581 Rhodanese-like domain JC776_07220 PF00899 ThiF family JC776_07225 PF07478 D-ala D-ala ligase C-terminus JC776_07225 PF01820 D-ala D-ala ligase N-terminus JC776_07315 PF04055 Radical SAM superfamily JC776_07320 PF01381 Helix-turn-helix JC776_07325 PF00665 Integrase core domain JC776_07330 PF01695 IstB-like ATP binding protein JC776_07345 PF01380 SIS domain JC776_07350 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JC776_07350 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JC776_07350 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JC776_07350 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JC776_07360 PF02457 DisA bacterial checkpoint controller nucleotide-binding JC776_07365 PF00491 Arginase family JC776_07370 PF02595 Glycerate kinase family JC776_07440 PF01522 Polysaccharide deacetylase JC776_07445 PF14089 KinB-signalling pathway activation in sporulation JC776_07450 PF17898 Spore germination GerD central core domain JC776_07455 PF10609 NUBPL iron-transfer P-loop NTPase JC776_07460 PF01520 N-acetylmuramoyl-L-alanine amidase JC776_07470 PF00380 Ribosomal protein S9/S16 JC776_07475 PF00572 Ribosomal protein L13 JC776_07480 PF01416 tRNA pseudouridine synthase JC776_07485 PF02361 Cobalt transport protein JC776_07490 PF00005 ABC transporter JC776_07495 PF00005 ABC transporter JC776_07500 PF01196 Ribosomal protein L17 JC776_07505 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain JC776_07505 PF01000 RNA polymerase Rpb3/RpoA insert domain JC776_07505 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain JC776_07510 PF00411 Ribosomal protein S11 JC776_07515 PF00416 Ribosomal protein S13/S18 JC776_07520 PF00444 Ribosomal protein L36 JC776_07525 PF01176 Translation initiation factor 1A / IF-1 JC776_07530 PF00557 Metallopeptidase family M24 JC776_07535 PF05191 Adenylate kinase, active site lid JC776_07540 PF00344 SecY translocase JC776_07545 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A JC776_07550 PF00327 Ribosomal protein L30p/L7e JC776_07555 PF03719 Ribosomal protein S5, C-terminal domain JC776_07555 PF00333 Ribosomal protein S5, N-terminal domain JC776_07560 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast JC776_07565 PF00347 Ribosomal protein L6 JC776_07570 PF00410 Ribosomal protein S8 JC776_07575 PF00253 Ribosomal protein S14p/S29e JC776_07580 PF00673 ribosomal L5P family C-terminus JC776_07580 PF00281 Ribosomal protein L5 JC776_07585 PF00467 KOW motif JC776_07585 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 JC776_07590 PF00238 Ribosomal protein L14p/L23e JC776_07595 PF00366 Ribosomal protein S17 JC776_07600 PF00831 Ribosomal L29 protein JC776_07605 PF00252 Ribosomal protein L16p/L10e JC776_07610 PF07650 KH domain JC776_07610 PF00189 Ribosomal protein S3, C-terminal domain JC776_07615 PF00237 Ribosomal protein L22p/L17e JC776_07620 PF00203 Ribosomal protein S19 JC776_07625 PF03947 Ribosomal Proteins L2, C-terminal domain JC776_07625 PF00181 Ribosomal Proteins L2, RNA binding domain JC776_07630 PF00276 Ribosomal protein L23 JC776_07635 PF00573 Ribosomal protein L4/L1 family JC776_07640 PF00297 Ribosomal protein L3 JC776_07645 PF00338 Ribosomal protein S10p/S20e JC776_07650 PF00009 Elongation factor Tu GTP binding domain JC776_07650 PF03144 Elongation factor Tu domain 2 JC776_07650 PF03143 Elongation factor Tu C-terminal domain JC776_07655 PF00009 Elongation factor Tu GTP binding domain JC776_07655 PF00679 Elongation factor G C-terminus JC776_07655 PF14492 Elongation Factor G, domain II JC776_07655 PF03144 Elongation factor Tu domain 2 JC776_07655 PF03764 Elongation factor G, domain IV JC776_07660 PF00177 Ribosomal protein S7p/S5e JC776_07665 PF00164 Ribosomal protein S12/S23 JC776_07670 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family JC776_07675 PF04997 RNA polymerase Rpb1, domain 1 JC776_07675 PF00623 RNA polymerase Rpb1, domain 2 JC776_07675 PF04983 RNA polymerase Rpb1, domain 3 JC776_07675 PF05000 RNA polymerase Rpb1, domain 4 JC776_07675 PF04998 RNA polymerase Rpb1, domain 5 JC776_07680 PF04560 RNA polymerase Rpb2, domain 7 JC776_07680 PF00562 RNA polymerase Rpb2, domain 6 JC776_07680 PF10385 RNA polymerase beta subunit external 1 domain JC776_07680 PF04561 RNA polymerase Rpb2, domain 2 JC776_07680 PF04563 RNA polymerase beta subunit JC776_07680 PF04565 RNA polymerase Rpb2, domain 3 JC776_07685 PF05175 Methyltransferase small domain JC776_07690 PF00542 Ribosomal protein L7/L12 C-terminal domain JC776_07690 PF16320 Ribosomal protein L7/L12 dimerisation domain JC776_07695 PF00466 Ribosomal protein L10 JC776_07700 PF00687 Ribosomal protein L1p/L10e family JC776_07705 PF00298 Ribosomal protein L11, RNA binding domain JC776_07705 PF03946 Ribosomal protein L11, N-terminal domain JC776_07710 PF02357 Transcription termination factor nusG JC776_07710 PF00467 KOW motif JC776_07720 PF00471 Ribosomal protein L33 JC776_07725 PF04542 Sigma-70 region 2 JC776_07725 PF08281 Sigma-70, region 4 JC776_07730 PF05991 YacP-like NYN domain JC776_07735 PF00588 SpoU rRNA Methylase family JC776_07735 PF08032 RNA 2'-O ribose methyltransferase substrate binding JC776_07740 PF00636 Ribonuclease III domain JC776_07745 PF01406 tRNA synthetases class I (C) catalytic domain JC776_07745 PF09190 DALR domain JC776_07750 PF00132 Bacterial transferase hexapeptide (six repeats) JC776_07750 PF06426 Serine acetyltransferase, N-terminal JC776_07755 PF00749 tRNA synthetases class I (E and Q), catalytic domain JC776_07760 PF02542 YgbB family JC776_07765 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase JC776_07775 PF02457 DisA bacterial checkpoint controller nucleotide-binding JC776_07775 PF10635 DisA bacterial checkpoint controller linker region JC776_07780 PF18073 Rubredoxin metal binding domain JC776_07785 PF17871 AAA lid domain JC776_07785 PF07724 AAA domain (Cdc48 subfamily) JC776_07785 PF00004 ATPase family associated with various cellular activities (AAA) JC776_07785 PF02861 Clp amino terminal domain, pathogenicity island component JC776_07785 PF10431 C-terminal, D2-small domain, of ClpB protein JC776_07790 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain JC776_07795 PF02151 UvrB/uvrC motif JC776_07800 PF05848 CtsR N-terminal HTH domain JC776_07800 PF17727 CtsR C-terminal dimerization domain JC776_07845 PF05697 Bacterial trigger factor protein (TF) JC776_07845 PF05698 Bacterial trigger factor protein (TF) C-terminus JC776_07880 PF00152 tRNA synthetases class II (D, K and N) JC776_07880 PF01336 OB-fold nucleic acid binding domain JC776_07885 PF01207 Dihydrouridine synthase (Dus) JC776_07890 PF01381 Helix-turn-helix JC776_07895 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) JC776_07900 PF02152 Dihydroneopterin aldolase JC776_07905 PF00809 Pterin binding enzyme JC776_07910 PF01063 Amino-transferase class IV JC776_07915 PF00117 Glutamine amidotransferase class-I JC776_07920 PF04715 Anthranilate synthase component I, N terminal region JC776_07920 PF00425 chorismate binding enzyme JC776_07925 PF00291 Pyridoxal-phosphate dependent enzyme JC776_07930 PF01430 Hsp33 protein JC776_07935 PF03309 Type III pantothenate kinase JC776_07940 PF17862 AAA+ lid domain JC776_07940 PF06480 FtsH Extracellular JC776_07940 PF01434 Peptidase family M41 JC776_07940 PF00004 ATPase family associated with various cellular activities (AAA) JC776_07945 PF00156 Phosphoribosyl transferase domain JC776_07950 PF09179 TilS substrate binding domain JC776_07950 PF01171 PP-loop family JC776_07950 PF11734 TilS substrate C-terminal domain JC776_07955 PF07228 Stage II sporulation protein E (SpoIIE) JC776_07970 PF00575 S1 RNA binding domain JC776_07980 PF09578 Spore cortex protein YabQ (Spore_YabQ) JC776_07985 PF07873 YabP family JC776_07990 PF01479 S4 domain JC776_07995 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JC776_07995 PF03819 MazG nucleotide pyrophosphohydrolase domain JC776_08000 PF01943 Polysaccharide biosynthesis protein JC776_08000 PF14667 Polysaccharide biosynthesis C-terminal domain JC776_08005 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin JC776_08005 PF15714 Stage V sporulation protein T C-terminal, transcription factor JC776_08010 PF02559 CarD-like/TRCF domain JC776_08010 PF00270 DEAD/DEAH box helicase JC776_08010 PF00271 Helicase conserved C-terminal domain JC776_08010 PF03461 TRCF domain JC776_08010 PF17757 UvrB interaction domain JC776_08020 PF01195 Peptidyl-tRNA hydrolase JC776_08025 PF14572 Phosphoribosyl synthetase-associated domain JC776_08025 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase JC776_08030 PF00132 Bacterial transferase hexapeptide (six repeats) JC776_08030 PF00483 Nucleotidyl transferase JC776_08035 PF04026 SpoVG JC776_08040 PF01042 Endoribonuclease L-PSP JC776_08045 PF00156 Phosphoribosyl transferase domain JC776_08045 PF09182 Bacterial purine repressor, N-terminal JC776_08050 PF08544 GHMP kinases C terminal JC776_08050 PF00288 GHMP kinases N terminal domain JC776_08055 PF00269 Small, acid-soluble spore proteins, alpha/beta type JC776_08060 PF06257 Biofilm formation stimulator VEG JC776_08065 PF05582 YabG peptidase U57 JC776_08070 PF00398 Ribosomal RNA adenine dimethylase JC776_08075 PF13331 Domain of unknown function (DUF4093) JC776_08075 PF13662 Toprim domain JC776_08080 PF01026 TatD related DNase JC776_08085 PF08264 Anticodon-binding domain of tRNA JC776_08085 PF09334 tRNA synthetases class I (M) JC776_08085 PF01588 Putative tRNA binding domain JC776_08090 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin JC776_08090 PF18277 AbrB C-terminal domain JC776_08095 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JC776_08100 PF01541 GIY-YIG catalytic domain JC776_08105 PF05175 Methyltransferase small domain JC776_08110 PF06156 Initiation control protein YabA JC776_08115 PF04468 PSP1 C-terminal conserved region JC776_08120 PF09115 DNA polymerase III, delta subunit, C terminal JC776_08125 PF02223 Thymidylate kinase JC776_08130 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain JC776_08130 PF01276 Orn/Lys/Arg decarboxylase, major domain JC776_08165 PF10704 Protein of unknown function (DUF2508) JC776_08170 PF13662 Toprim domain JC776_08170 PF02132 RecR protein JC776_08175 PF02575 YbaB/EbfC DNA-binding family JC776_08180 PF12169 DNA polymerase III subunits gamma and tau domain III JC776_08190 PF14437 MafB19-like deaminase JC776_08195 PF00857 Isochorismatase family JC776_08200 PF01712 Deoxynucleoside kinase JC776_08205 PF01712 Deoxynucleoside kinase JC776_08220 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JC776_08220 PF02403 Seryl-tRNA synthetase N-terminal domain JC776_08225 PF01174 SNO glutamine amidotransferase family JC776_08230 PF01680 SOR/SNZ family JC776_08235 PF00768 D-alanyl-D-alanine carboxypeptidase JC776_08235 PF07943 Penicillin-binding protein 5, C-terminal domain JC776_08240 PF00478 IMP dehydrogenase / GMP reductase domain JC776_08240 PF00571 CBS domain JC776_08245 PF14175 YaaC-like Protein JC776_08275 PF03989 DNA gyrase C-terminal domain, beta-propeller JC776_08275 PF00521 DNA gyrase/topoisomerase IV, subunit A JC776_08280 PF00204 DNA gyrase B JC776_08280 PF00986 DNA gyrase B subunit, carboxyl terminus JC776_08280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC776_08280 PF01751 Toprim domain JC776_08285 PF02463 RecF/RecN/SMC N terminal domain JC776_08295 PF00712 DNA polymerase III beta subunit, N-terminal domain JC776_08295 PF02768 DNA polymerase III beta subunit, C-terminal domain JC776_08295 PF02767 DNA polymerase III beta subunit, central domain JC776_08300 PF00308 Bacterial dnaA protein JC776_08300 PF11638 DnaA N-terminal domain JC776_08300 PF08299 Bacterial dnaA protein helix-turn-helix JC776_08305 PF00468 Ribosomal protein L34 JC776_08310 PF00825 Ribonuclease P JC776_08315 PF02096 60Kd inner membrane protein JC776_08320 PF14804 Jag N-terminus JC776_08320 PF01424 R3H domain JC776_08325 PF10396 GTP-binding protein TrmE N-terminus JC776_08325 PF01926 50S ribosome-binding GTPase JC776_08325 PF12631 MnmE helical domain JC776_08330 PF01134 Glucose inhibited division protein A JC776_08330 PF13932 GidA associated domain JC776_08335 PF02527 rRNA small subunit methyltransferase G JC776_08340 PF17762 HTH domain found in ParB protein JC776_08340 PF02195 ParB-like nuclease domain JC776_08345 PF13614 AAA domain JC776_08350 PF17762 HTH domain found in ParB protein JC776_08350 PF02195 ParB-like nuclease domain JC776_08355 PF06866 Protein of unknown function (DUF1256) JC776_08360 PF00924 Mechanosensitive ion channel JC776_08365 PF06107 Bacterial protein of unknown function (DUF951) JC776_08370 PF06071 Protein of unknown function (DUF933) JC776_08370 PF01926 50S ribosome-binding GTPase JC776_08375 PF01250 Ribosomal protein S6 JC776_08380 PF00436 Single-strand binding protein family JC776_08385 PF01084 Ribosomal protein S18 JC776_08390 PF09991 Predicted membrane protein (DUF2232) JC776_08395 PF01368 DHH family JC776_08395 PF02272 DHHA1 domain JC776_08400 PF01281 Ribosomal protein L9, N-terminal domain JC776_08400 PF03948 Ribosomal protein L9, C-terminal domain JC776_08405 PF00772 DnaB-like helicase N terminal domain JC776_08405 PF03796 DnaB-like helicase C terminal domain JC776_08410 PF00709 Adenylosuccinate synthetase JC776_08435 PF00486 Transcriptional regulatory protein, C terminal JC776_08435 PF00072 Response regulator receiver domain JC776_08440 PF13426 PAS domain JC776_08440 PF00512 His Kinase A (phospho-acceptor) domain JC776_08440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC776_08440 PF00672 HAMP domain JC776_08450 PF09648 YycH protein JC776_08455 PF00753 Metallo-beta-lactamase superfamily JC776_08460 PF13180 PDZ domain JC776_08470 PF02590 Predicted SPOUT methyltransferase JC776_08480 PF00664 ABC transporter transmembrane region JC776_08480 PF00005 ABC transporter JC776_08495 PF00589 Phage integrase family JC776_08525 PF00478 IMP dehydrogenase / GMP reductase domain JC776_08550 PF00874 PRD domain JC776_08550 PF08279 HTH domain JC776_08550 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JC776_08550 PF05043 Mga helix-turn-helix domain JC776_08555 PF16363 GDP-mannose 4,6 dehydratase JC776_08565 PF02777 Iron/manganese superoxide dismutases, C-terminal domain JC776_08565 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain JC776_08570 PF02898 Nitric oxide synthase, oxygenase domain JC776_08575 PF07690 Major Facilitator Superfamily JC776_08580 PF07694 5TMR of 5TMR-LYT JC776_08580 PF06580 Histidine kinase JC776_08580 PF13492 GAF domain JC776_08580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC776_08585 PF04397 LytTr DNA-binding domain JC776_08585 PF00072 Response regulator receiver domain JC776_08590 PF03788 LrgA family JC776_08595 PF04172 LrgB-like family JC776_08600 PF01594 AI-2E family transporter JC776_08605 PF01625 Peptide methionine sulfoxide reductase JC776_08605 PF01641 SelR domain JC776_08610 PF00873 AcrB/AcrD/AcrF family JC776_08615 PF00440 Bacterial regulatory proteins, tetR family JC776_08620 PF00005 ABC transporter JC776_08620 PF12848 ABC transporter JC776_08625 PF00535 Glycosyl transferase family 2 JC776_08640 PF00535 Glycosyl transferase family 2 JC776_08655 PF00535 Glycosyl transferase family 2 JC776_08660 PF03061 Thioesterase superfamily JC776_08675 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JC776_08680 PF03458 UPF0126 domain JC776_08690 PF13439 Glycosyltransferase Family 4 JC776_08690 PF00534 Glycosyl transferases group 1 JC776_08695 PF03808 Glycosyl transferase WecB/TagA/CpsF family JC776_08700 PF07690 Major Facilitator Superfamily JC776_08705 PF04397 LytTr DNA-binding domain JC776_08705 PF00072 Response regulator receiver domain JC776_08710 PF02554 Carbon starvation protein CstA JC776_08710 PF13722 5TM C-terminal transporter carbon starvation CstA JC776_08720 PF08543 Phosphomethylpyrimidine kinase JC776_08725 PF01906 Putative heavy-metal-binding JC776_08730 PF01053 Cys/Met metabolism PLP-dependent enzyme JC776_08735 PF04204 Homoserine O-succinyltransferase JC776_08740 PF01842 ACT domain JC776_08740 PF00742 Homoserine dehydrogenase JC776_08740 PF03447 Homoserine dehydrogenase, NAD binding domain JC776_08745 PF13472 GDSL-like Lipase/Acylhydrolase family JC776_08750 PF00005 ABC transporter JC776_08755 PF12679 ABC-2 family transporter protein JC776_08760 PF03167 Uracil DNA glycosylase superfamily JC776_08765 PF12823 Domain of unknown function (DUF3817) JC776_08775 PF00860 Permease family JC776_08780 PF02254 TrkA-N domain JC776_08780 PF07885 Ion channel JC776_08790 PF04241 Protein of unknown function (DUF423) JC776_08795 PF09671 Spore coat protein (Spore_GerQ) JC776_08800 PF07486 Cell Wall Hydrolase JC776_08805 PF07943 Penicillin-binding protein 5, C-terminal domain JC776_08805 PF00768 D-alanyl-D-alanine carboxypeptidase JC776_08810 PF06778 Chlorite dismutase JC776_08815 PF01515 Phosphate acetyl/butaryl transferase JC776_08820 PF03099 Biotin/lipoate A/B protein ligase family JC776_08830 PF07293 Protein of unknown function (DUF1450) JC776_08835 PF01032 FecCD transport family JC776_08840 PF01032 FecCD transport family JC776_08845 PF00005 ABC transporter JC776_08850 PF01497 Periplasmic binding protein JC776_08855 PF01966 HD domain JC776_08860 PF01361 Tautomerase enzyme JC776_08865 PF02163 Peptidase family M50 JC776_08870 PF08741 YwhD family JC776_08875 PF00912 Transglycosylase JC776_08875 PF00905 Penicillin binding protein transpeptidase domain JC776_08880 PF03009 Glycerophosphoryl diester phosphodiesterase family JC776_08885 PF13411 MerR HTH family regulatory protein JC776_08890 PF07690 Major Facilitator Superfamily JC776_08895 PF17284 Spermidine synthase tetramerisation domain JC776_08900 PF00491 Arginase family JC776_08915 PF02016 LD-carboxypeptidase N-terminal domain JC776_08915 PF17676 LD-carboxypeptidase C-terminal domain JC776_08920 PF09148 Domain of unknown function (DUF1934) JC776_08925 PF05746 DALR anticodon binding domain JC776_08925 PF03485 Arginyl tRNA synthetase N terminal domain JC776_08925 PF00750 tRNA synthetases class I (R) JC776_08935 PF02225 PA domain JC776_08935 PF04389 Peptidase family M28 JC776_08940 PF00557 Metallopeptidase family M24 JC776_08945 PF00005 ABC transporter JC776_08955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC776_08955 PF07730 Histidine kinase JC776_08960 PF00196 Bacterial regulatory proteins, luxR family JC776_08960 PF00072 Response regulator receiver domain JC776_08975 PF13091 PLD-like domain JC776_08980 PF02754 Cysteine-rich domain JC776_08980 PF13183 4Fe-4S dicluster domain JC776_08985 PF00108 Thiolase, N-terminal domain JC776_08985 PF02803 Thiolase, C-terminal domain JC776_08990 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JC776_08990 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JC776_08995 PF02770 Acyl-CoA dehydrogenase, middle domain JC776_08995 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JC776_08995 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JC776_09000 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JC776_09000 PF02770 Acyl-CoA dehydrogenase, middle domain JC776_09000 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JC776_09010 PF05066 HB1, ASXL, restriction endonuclease HTH domain JC776_09015 PF06418 CTP synthase N-terminus JC776_09015 PF00117 Glutamine amidotransferase class-I JC776_09020 PF10740 Domain of unknown function (DUF2529) JC776_09025 PF00072 Response regulator receiver domain JC776_09030 PF01116 Fructose-bisphosphate aldolase class-II JC776_09035 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JC776_09040 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded JC776_09045 PF07498 Rho termination factor, N-terminal domain JC776_09045 PF07497 Rho termination factor, RNA-binding domain JC776_09045 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JC776_09050 PF01197 Ribosomal protein L31 JC776_09055 PF00265 Thymidine kinase JC776_09060 PF03462 PCRF domain JC776_09060 PF00472 RF-1 domain JC776_09065 PF13847 Methyltransferase domain JC776_09065 PF17827 PrmC N-terminal domain JC776_09070 PF09551 Stage II sporulation protein R (spore_II_R) JC776_09080 PF03481 Putative GTP-binding controlling metal-binding JC776_09080 PF01300 Telomere recombination JC776_09085 PF02659 Putative manganese efflux pump JC776_09095 PF01613 Flavin reductase like domain JC776_09100 PF07681 DoxX JC776_09105 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JC776_09115 PF01451 Low molecular weight phosphotyrosine protein phosphatase JC776_09120 PF02502 Ribose/Galactose Isomerase JC776_09125 PF04260 Protein of unknown function (DUF436) JC776_09130 PF00464 Serine hydroxymethyltransferase JC776_09150 PF03899 ATP synthase I chain JC776_09155 PF00119 ATP synthase A chain JC776_09160 PF00137 ATP synthase subunit C JC776_09165 PF00430 ATP synthase B/B' CF(0) JC776_09170 PF00213 ATP synthase delta (OSCP) subunit JC776_09175 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JC776_09175 PF00306 ATP synthase alpha/beta chain, C terminal domain JC776_09175 PF02874 ATP synthase alpha/beta family, beta-barrel domain JC776_09180 PF00231 ATP synthase JC776_09185 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JC776_09185 PF02874 ATP synthase alpha/beta family, beta-barrel domain JC776_09190 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain JC776_09190 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain JC776_09205 PF00563 EAL domain JC776_09205 PF00990 Diguanylate cyclase, GGDEF domain JC776_09205 PF03707 Bacterial signalling protein N terminal repeat JC776_09210 PF00563 EAL domain JC776_09210 PF00990 Diguanylate cyclase, GGDEF domain JC776_09210 PF03707 Bacterial signalling protein N terminal repeat JC776_09215 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 JC776_09220 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit JC776_09225 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit JC776_09230 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit JC776_09235 PF00146 NADH dehydrogenase JC776_09245 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 JC776_09250 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L JC776_09255 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus JC776_09255 PF00361 Proton-conducting membrane transporter JC776_09255 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus JC776_09260 PF00361 Proton-conducting membrane transporter JC776_09265 PF00361 Proton-conducting membrane transporter JC776_09270 PF06612 Protein of unknown function (DUF1146) JC776_09280 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JC776_09285 PF08486 Stage II sporulation protein JC776_09290 PF04397 LytTr DNA-binding domain JC776_09290 PF00072 Response regulator receiver domain JC776_09295 PF00005 ABC transporter JC776_09305 PF01551 Peptidase family M23 JC776_09315 PF12116 Stage III sporulation protein D JC776_09330 PF01467 Cytidylyltransferase-like JC776_09335 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase JC776_09340 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase JC776_09340 PF00535 Glycosyl transferase family 2 JC776_09345 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase JC776_09350 PF01061 ABC-2 type transporter JC776_09355 PF08239 Bacterial SH3 domain JC776_09355 PF00005 ABC transporter JC776_09360 PF00535 Glycosyl transferase family 2 JC776_09360 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase JC776_09370 PF07977 FabA-like domain JC776_09375 PF03816 Cell envelope-related transcriptional attenuator domain JC776_09380 PF00072 Response regulator receiver domain JC776_09380 PF00486 Transcriptional regulatory protein, C terminal JC776_09385 PF00672 HAMP domain JC776_09385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC776_09385 PF00512 His Kinase A (phospho-acceptor) domain JC776_09400 PF07690 Major Facilitator Superfamily JC776_09405 PF00395 S-layer homology domain JC776_09405 PF01520 N-acetylmuramoyl-L-alanine amidase JC776_09420 PF00005 ABC transporter JC776_09425 PF12704 MacB-like periplasmic core domain JC776_09425 PF02687 FtsX-like permease family JC776_09430 PF04893 Yip1 domain JC776_09465 PF00176 SNF2 family N-terminal domain JC776_09465 PF00271 Helicase conserved C-terminal domain JC776_09465 PF12419 SNF2 Helicase protein JC776_09470 PF04434 SWIM zinc finger JC776_09485 PF01476 LysM domain JC776_09485 PF06725 3D domain JC776_09490 PF02028 BCCT, betaine/carnitine/choline family transporter JC776_09505 PF01773 Na+ dependent nucleoside transporter N-terminus JC776_09505 PF07662 Na+ dependent nucleoside transporter C-terminus JC776_09510 PF01476 LysM domain JC776_09510 PF00877 NlpC/P60 family JC776_09515 PF01063 Amino-transferase class IV JC776_09520 PF00884 Sulfatase JC776_09530 PF09988 Uncharacterized metal-binding protein (DUF2227) JC776_09535 PF02652 L-lactate permease JC776_09540 PF01964 Radical SAM ThiC family JC776_09540 PF13667 ThiC-associated domain JC776_09545 PF02322 Cytochrome bd terminal oxidase subunit II JC776_09550 PF01654 Cytochrome bd terminal oxidase subunit I JC776_09565 PF00375 Sodium:dicarboxylate symporter family JC776_09570 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit JC776_09575 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JC776_09580 PF02378 Phosphotransferase system, EIIC JC776_09585 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit JC776_09590 PF02056 Family 4 glycosyl hydrolase JC776_09590 PF11975 Family 4 glycosyl hydrolase C-terminal domain JC776_09605 PF03610 PTS system fructose IIA component JC776_09605 PF00158 Sigma-54 interaction domain JC776_09605 PF00874 PRD domain JC776_09610 PF01522 Polysaccharide deacetylase JC776_09615 PF00953 Glycosyl transferase family 4 JC776_09620 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain JC776_09620 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain JC776_09620 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain JC776_09630 PF02350 UDP-N-acetylglucosamine 2-epimerase JC776_09640 PF03816 Cell envelope-related transcriptional attenuator domain JC776_09645 PF09186 Domain of unknown function (DUF1949) JC776_09645 PF01205 Uncharacterized protein family UPF0029 JC776_09650 PF02645 Uncharacterised protein, DegV family COG1307 JC776_09655 PF01638 HxlR-like helix-turn-helix JC776_09660 PF00877 NlpC/P60 family JC776_09660 PF01476 LysM domain JC776_09665 PF00271 Helicase conserved C-terminal domain JC776_09665 PF04851 Type III restriction enzyme, res subunit JC776_09675 PF00313 'Cold-shock' DNA-binding domain JC776_09680 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus JC776_09680 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein JC776_09685 PF07517 SecA DEAD-like domain JC776_09685 PF01043 SecA preprotein cross-linking domain JC776_09685 PF07516 SecA Wing and Scaffold domain JC776_09685 PF02810 SEC-C motif JC776_09695 PF13442 Cytochrome C oxidase, cbb3-type, subunit III JC776_09700 PF00005 ABC transporter JC776_09705 PF02687 FtsX-like permease family JC776_09705 PF18075 FtsX extracellular domain JC776_09710 PF17820 PDZ domain JC776_09710 PF03572 Peptidase family S41 JC776_09710 PF01471 Putative peptidoglycan binding domain JC776_09715 PF17820 PDZ domain JC776_09730 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JC776_09730 PF03466 LysR substrate binding domain JC776_09735 PF03601 Conserved hypothetical protein 698 JC776_09755 PF13411 MerR HTH family regulatory protein JC776_09765 PF02151 UvrB/uvrC motif JC776_09765 PF17757 UvrB interaction domain JC776_09765 PF12344 Ultra-violet resistance protein B JC776_09765 PF00271 Helicase conserved C-terminal domain JC776_09765 PF04851 Type III restriction enzyme, res subunit JC776_09770 PF17760 UvrA interaction domain JC776_09770 PF17755 UvrA DNA-binding domain JC776_09770 PF00005 ABC transporter JC776_09780 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV JC776_09785 PF02603 HPr Serine kinase N terminus JC776_09785 PF07475 HPr Serine kinase C-terminal domain JC776_09790 PF01790 Prolipoprotein diacylglyceryl transferase JC776_09795 PF13419 Haloacid dehalogenase-like hydrolase JC776_09800 PF14602 Hexapeptide repeat of succinyl-transferase JC776_09810 PF07992 Pyridine nucleotide-disulphide oxidoreductase JC776_09820 PF00293 NUDIX domain JC776_09825 PF03668 P-loop ATPase protein family JC776_09830 PF01933 Uncharacterised protein family UPF0052 JC776_09835 PF10298 WhiA N-terminal LAGLIDADG-like domain JC776_09835 PF02650 WhiA C-terminal HTH domain JC776_09835 PF14527 WhiA LAGLIDADG-like domain JC776_09840 PF00381 PTS HPr component phosphorylation site JC776_09845 PF00574 Clp protease JC776_09850 PF04239 Protein of unknown function (DUF421) JC776_09860 PF03862 SpoVAC/SpoVAEB sporulation membrane protein JC776_09865 PF07451 Stage V sporulation protein AD (SpoVAD) JC776_09870 PF03862 SpoVAC/SpoVAEB sporulation membrane protein JC776_09910 PF00309 Sigma-54 factor, Activator interacting domain (AID) JC776_09910 PF04963 Sigma-54 factor, core binding domain JC776_09910 PF04552 Sigma-54, DNA binding domain JC776_09920 PF04198 Putative sugar-binding domain JC776_09925 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain JC776_09925 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain JC776_09930 PF00162 Phosphoglycerate kinase JC776_09935 PF00121 Triosephosphate isomerase JC776_09940 PF01676 Metalloenzyme superfamily JC776_09940 PF06415 BPG-independent PGAM N-terminus (iPGM_N) JC776_09945 PF03952 Enolase, N-terminal domain JC776_09945 PF00113 Enolase, C-terminal TIM barrel domain JC776_09950 PF03788 LrgA family JC776_09955 PF04172 LrgB-like family JC776_09960 PF03840 Preprotein translocase SecG subunit JC776_09965 PF12146 Serine aminopeptidase, S33 JC776_09970 PF17876 Cold shock domain JC776_09970 PF08206 Ribonuclease B OB domain JC776_09970 PF00773 RNB domain JC776_09970 PF00575 S1 RNA binding domain JC776_09975 PF01668 SmpB protein JC776_09990 PF03323 Bacillus/Clostridium GerA spore germination protein JC776_09995 PF05504 Spore germination B3/ GerAC like, C-terminal JC776_10010 PF03845 Spore germination protein JC776_10015 PF06146 Phosphate-starvation-inducible E JC776_10020 PF02311 AraC-like ligand binding domain JC776_10020 PF12833 Helix-turn-helix domain JC776_10025 PF01588 Putative tRNA binding domain JC776_10030 PF10710 Protein of unknown function (DUF2512) JC776_10035 PF02537 CrcB-like protein, Camphor Resistance (CrcB) JC776_10040 PF02537 CrcB-like protein, Camphor Resistance (CrcB) JC776_10050 PF01565 FAD binding domain JC776_10050 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain JC776_10055 PF07992 Pyridine nucleotide-disulphide oxidoreductase JC776_10060 PF07849 Protein of unknown function (DUF1641) JC776_10070 PF13460 NAD(P)H-binding JC776_10075 PF01235 Sodium:alanine symporter family JC776_10080 PF07662 Na+ dependent nucleoside transporter C-terminus JC776_10080 PF01773 Na+ dependent nucleoside transporter N-terminus JC776_10085 PF07662 Na+ dependent nucleoside transporter C-terminus JC776_10085 PF01773 Na+ dependent nucleoside transporter N-terminus JC776_10105 PF00005 ABC transporter JC776_10110 PF00950 ABC 3 transport family JC776_10115 PF01297 Zinc-uptake complex component A periplasmic JC776_10135 PF03641 Possible lysine decarboxylase JC776_10140 PF00210 Ferritin-like domain JC776_10150 PF01047 MarR family JC776_10155 PF17954 Quercetinase C-terminal cupin domain JC776_10155 PF02678 Pirin JC776_10160 PF07504 Fungalysin/Thermolysin Propeptide Motif JC776_10160 PF03413 Peptidase propeptide and YPEB domain JC776_10160 PF01447 Thermolysin metallopeptidase, catalytic domain JC776_10160 PF02868 Thermolysin metallopeptidase, alpha-helical domain JC776_10165 PF01883 Iron-sulfur cluster assembly protein JC776_10170 PF02743 Cache domain JC776_10170 PF00672 HAMP domain JC776_10170 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JC776_10175 PF02743 Cache domain JC776_10175 PF00672 HAMP domain JC776_10175 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JC776_10180 PF00989 PAS fold JC776_10180 PF00512 His Kinase A (phospho-acceptor) domain JC776_10180 PF16736 Single Cache-like JC776_10180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC776_10185 PF00486 Transcriptional regulatory protein, C terminal JC776_10185 PF00072 Response regulator receiver domain JC776_10190 PF17969 L,D-transpeptidase C-terminal domain JC776_10190 PF03734 L,D-transpeptidase catalytic domain JC776_10200 PF09335 SNARE associated Golgi protein JC776_10210 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JC776_10210 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JC776_10220 PF02096 60Kd inner membrane protein JC776_10225 PF13520 Amino acid permease JC776_10245 PF00672 HAMP domain JC776_10245 PF02743 Cache domain JC776_10245 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JC776_10250 PF01910 Thiamine-binding protein JC776_10265 PF01619 Proline dehydrogenase JC776_10270 PF00768 D-alanyl-D-alanine carboxypeptidase JC776_10270 PF07943 Penicillin-binding protein 5, C-terminal domain JC776_10275 PF14115 YuzL-like protein JC776_10280 PF00378 Enoyl-CoA hydratase/isomerase JC776_10280 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JC776_10280 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JC776_10285 PF00108 Thiolase, N-terminal domain JC776_10285 PF02803 Thiolase, C-terminal domain JC776_10290 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JC776_10290 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JC776_10290 PF02770 Acyl-CoA dehydrogenase, middle domain JC776_10315 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain JC776_10315 PF00056 lactate/malate dehydrogenase, NAD binding domain JC776_10335 PF03960 ArsC family JC776_10340 PF01597 Glycine cleavage H-protein JC776_10345 PF01751 Toprim domain JC776_10350 PF00085 Thioredoxin JC776_10360 PF09383 NIL domain JC776_10360 PF00005 ABC transporter JC776_10365 PF00528 Binding-protein-dependent transport system inner membrane component JC776_10370 PF03180 NLPA lipoprotein JC776_10375 PF00005 ABC transporter JC776_10380 PF01458 Uncharacterized protein family (UPF0051) JC776_10385 PF00266 Aminotransferase class-V JC776_10390 PF01592 NifU-like N terminal domain JC776_10395 PF01458 Uncharacterized protein family (UPF0051) JC776_10410 PF02872 5'-nucleotidase, C-terminal domain JC776_10415 PF08827 Domain of unknown function (DUF1805) JC776_10420 PF09560 Sporulation protein YunB (Spo_YunB) JC776_10425 PF01551 Peptidase family M23 JC776_10430 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family JC776_10430 PF04055 Radical SAM superfamily JC776_10445 PF10086 YhfC intramembrane metalloprotease JC776_10450 PF07739 TipAS antibiotic-recognition domain JC776_10450 PF13411 MerR HTH family regulatory protein JC776_10460 PF06265 Protein of unknown function (DUF1027) JC776_10470 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded JC776_10475 PF01934 Protein of unknown function DUF86 JC776_10485 PF13344 Haloacid dehalogenase-like hydrolase JC776_10495 PF04608 Phosphatidylglycerophosphatase A JC776_10505 PF01106 NifU-like domain JC776_10510 PF07315 Protein of unknown function (DUF1462) JC776_10520 PF11188 Protein of unknown function (DUF2975) JC776_10525 PF13443 Cro/C1-type HTH DNA-binding domain JC776_10535 PF03831 PhnA domain JC776_10535 PF08274 PhnA Zinc-Ribbon JC776_10540 PF07992 Pyridine nucleotide-disulphide oxidoreductase JC776_10545 PF07293 Protein of unknown function (DUF1450) JC776_10550 PF01773 Na+ dependent nucleoside transporter N-terminus JC776_10550 PF07662 Na+ dependent nucleoside transporter C-terminus JC776_10555 PF01678 Diaminopimelate epimerase JC776_10560 PF01521 Iron-sulphur cluster biosynthesis JC776_10585 PF00005 ABC transporter JC776_10615 PF01695 IstB-like ATP binding protein JC776_10620 PF04463 Protein of unknown function (DUF523) JC776_10635 PF07992 Pyridine nucleotide-disulphide oxidoreductase JC776_10640 PF07992 Pyridine nucleotide-disulphide oxidoreductase JC776_10645 PF17369 Family of unknown function (DUF5391) JC776_10650 PF00293 NUDIX domain JC776_10650 PF13344 Haloacid dehalogenase-like hydrolase JC776_10660 PF06725 3D domain JC776_10670 PF02789 Cytosol aminopeptidase family, N-terminal domain JC776_10670 PF00883 Cytosol aminopeptidase family, catalytic domain JC776_10675 PF10372 Bacterial membrane-spanning protein N-terminus JC776_10675 PF02457 DisA bacterial checkpoint controller nucleotide-binding JC776_10680 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JC776_10680 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JC776_10680 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JC776_10680 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JC776_10685 PF00483 Nucleotidyl transferase JC776_10690 PF02632 BioY family JC776_10700 PF03061 Thioesterase superfamily JC776_10715 PF03129 Anticodon binding domain JC776_10715 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JC776_10720 PF03600 Citrate transporter JC776_10725 PF00929 Exonuclease JC776_10730 PF08810 Kinase associated protein B JC776_10745 PF00080 Copper/zinc superoxide dismutase (SODC) JC776_10750 PF00155 Aminotransferase class I and II JC776_10760 PF00561 alpha/beta hydrolase fold JC776_10760 PF08386 TAP-like protein JC776_10765 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JC776_10765 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JC776_10770 PF01037 Lrp/AsnC ligand binding domain JC776_10775 PF00155 Aminotransferase class I and II JC776_10780 PF00575 S1 RNA binding domain JC776_10785 PF04070 Domain of unknown function (DUF378) JC776_10790 PF00342 Phosphoglucose isomerase JC776_10795 PF08868 YugN-like family JC776_10800 PF02254 TrkA-N domain JC776_10800 PF07885 Ion channel JC776_10805 PF02308 MgtC family JC776_10840 PF05697 Bacterial trigger factor protein (TF) JC776_10840 PF05698 Bacterial trigger factor protein (TF) C-terminus JC776_10935 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain JC776_10935 PF00056 lactate/malate dehydrogenase, NAD binding domain JC776_10940 PF00128 Alpha amylase, catalytic domain JC776_10940 PF02806 Alpha amylase, C-terminal all-beta domain JC776_10940 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) JC776_10945 PF00483 Nucleotidyl transferase JC776_10950 PF00483 Nucleotidyl transferase JC776_10955 PF08323 Starch synthase catalytic domain JC776_10955 PF00534 Glycosyl transferases group 1 JC776_10960 PF00343 Carbohydrate phosphorylase JC776_10975 PF00313 'Cold-shock' DNA-binding domain JC776_10980 PF01258 Prokaryotic dksA/traR C4-type zinc finger JC776_10985 PF01040 UbiA prenyltransferase family JC776_10990 PF00425 chorismate binding enzyme JC776_10995 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JC776_10995 PF16582 Middle domain of thiamine pyrophosphate JC776_10995 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JC776_11000 PF12697 Alpha/beta hydrolase family JC776_11005 PF00378 Enoyl-CoA hydratase/isomerase JC776_11010 PF00501 AMP-binding enzyme JC776_11010 PF13193 AMP-binding enzyme C-terminal domain JC776_11015 PF13378 Enolase C-terminal domain-like JC776_11015 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain JC776_11030 PF02687 FtsX-like permease family JC776_11035 PF00005 ABC transporter JC776_11040 PF02687 FtsX-like permease family JC776_11045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC776_11050 PF00072 Response regulator receiver domain JC776_11050 PF00486 Transcriptional regulatory protein, C terminal JC776_11060 PF00005 ABC transporter JC776_11065 PF00781 Diacylglycerol kinase catalytic domain JC776_11070 PF00156 Phosphoribosyl transferase domain JC776_11085 PF09515 Thiamine transporter protein (Thia_YuaJ) JC776_11095 PF07664 Ferrous iron transport protein B C terminus JC776_11095 PF17910 FeoB cytosolic helical domain JC776_11095 PF02421 Ferrous iron transport protein B JC776_11095 PF07670 Nucleoside recognition JC776_11110 PF04012 PspA/IM30 family JC776_11140 PF02322 Cytochrome bd terminal oxidase subunit II JC776_11145 PF01654 Cytochrome bd terminal oxidase subunit I JC776_11150 PF00484 Carbonic anhydrase JC776_11155 PF01809 Putative membrane protein insertion efficiency factor JC776_11160 PF02664 S-Ribosylhomocysteinase (LuxS) JC776_11170 PF00293 NUDIX domain JC776_11185 PF00528 Binding-protein-dependent transport system inner membrane component JC776_11190 PF00005 ABC transporter JC776_11210 PF00884 Sulfatase JC776_11215 PF01022 Bacterial regulatory protein, arsR family JC776_11220 PF01510 N-acetylmuramoyl-L-alanine amidase JC776_11220 PF01471 Putative peptidoglycan binding domain JC776_11225 PF09339 IclR helix-turn-helix domain JC776_11225 PF01614 Bacterial transcriptional regulator JC776_11230 PF08125 Mannitol dehydrogenase C-terminal domain JC776_11230 PF01232 Mannitol dehydrogenase Rossmann domain JC776_11235 PF03786 D-mannonate dehydratase (UxuA) JC776_11240 PF02447 GntP family permease JC776_11245 PF01081 KDPG and KHG aldolase JC776_11260 PF00128 Alpha amylase, catalytic domain JC776_11260 PF02903 Alpha amylase, N-terminal ig-like domain JC776_11260 PF00395 S-layer homology domain JC776_11270 PF08280 M protein trans-acting positive regulator (MGA) HTH domain JC776_11270 PF05043 Mga helix-turn-helix domain JC776_11270 PF00874 PRD domain JC776_11295 PF01293 Phosphoenolpyruvate carboxykinase JC776_11300 PF02773 S-adenosylmethionine synthetase, C-terminal domain JC776_11300 PF02772 S-adenosylmethionine synthetase, central domain JC776_11300 PF00438 S-adenosylmethionine synthetase, N-terminal domain JC776_11305 PF13302 Acetyltransferase (GNAT) domain JC776_11320 PF00994 Probable molybdopterin binding domain JC776_11325 PF12804 MobA-like NTP transferase domain JC776_11335 PF00132 Bacterial transferase hexapeptide (six repeats) JC776_11340 PF12146 Serine aminopeptidase, S33 JC776_11345 PF10776 Protein of unknown function (DUF2600) JC776_11350 PF08279 HTH domain JC776_11350 PF13280 WYL domain JC776_11360 PF01177 Asp/Glu/Hydantoin racemase JC776_11370 PF00005 ABC transporter JC776_11375 PF06962 Putative rRNA methylase JC776_11380 PF04055 Radical SAM superfamily JC776_11380 PF16199 Radical_SAM C-terminal domain JC776_11385 PF10732 Protein of unknown function (DUF2524) JC776_11395 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JC776_11400 PF00005 ABC transporter JC776_11410 PF07690 Major Facilitator Superfamily JC776_11415 PF08264 Anticodon-binding domain of tRNA JC776_11415 PF13603 Leucyl-tRNA synthetase, Domain 2 JC776_11415 PF09334 tRNA synthetases class I (M) JC776_11415 PF00133 tRNA synthetases class I (I, L, M and V) JC776_11445 PF03323 Bacillus/Clostridium GerA spore germination protein JC776_11450 PF00561 alpha/beta hydrolase fold JC776_11460 PF00581 Rhodanese-like domain JC776_11475 PF02665 Nitrate reductase gamma subunit JC776_11480 PF02613 Nitrate reductase delta subunit JC776_11485 PF13247 4Fe-4S dicluster domain JC776_11485 PF14711 Respiratory nitrate reductase beta C-terminal JC776_11490 PF00384 Molybdopterin oxidoreductase JC776_11490 PF01568 Molydopterin dinucleotide binding domain JC776_11490 PF14710 Respiratory nitrate reductase alpha N-terminal JC776_11495 PF00027 Cyclic nucleotide-binding domain JC776_11495 PF00325 Bacterial regulatory proteins, crp family JC776_11500 PF04055 Radical SAM superfamily JC776_11500 PF06463 Molybdenum Cofactor Synthesis C JC776_11505 PF00899 ThiF family JC776_11510 PF01967 MoaC family JC776_11515 PF00994 Probable molybdopterin binding domain JC776_11515 PF03454 MoeA C-terminal region (domain IV) JC776_11515 PF03453 MoeA N-terminal region (domain I and II) JC776_11520 PF03205 Molybdopterin guanine dinucleotide synthesis protein B JC776_11525 PF02391 MoaE protein JC776_11535 PF07690 Major Facilitator Superfamily JC776_11540 PF06800 Sugar transport protein JC776_11545 PF02559 CarD-like/TRCF domain JC776_11555 PF10957 Sporulation protein Cse60 JC776_11565 PF08327 Activator of Hsp90 ATPase homolog 1-like protein JC776_11570 PF01022 Bacterial regulatory protein, arsR family JC776_11575 PF07690 Major Facilitator Superfamily JC776_11585 PF01943 Polysaccharide biosynthesis protein JC776_11585 PF14667 Polysaccharide biosynthesis C-terminal domain JC776_11590 PF00849 RNA pseudouridylate synthase JC776_11590 PF01479 S4 domain JC776_11595 PF08220 DeoR-like helix-turn-helix domain JC776_11600 PF01546 Peptidase family M20/M25/M40 JC776_11605 PF02834 LigT like Phosphoesterase JC776_11610 PF17999 Pullulanase N1-terminal domain JC776_11610 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) JC776_11610 PF00128 Alpha amylase, catalytic domain JC776_11615 PF01636 Phosphotransferase enzyme family JC776_11620 PF14165 YtzH-like protein JC776_11625 PF02390 Putative methyltransferase JC776_11630 PF00753 Metallo-beta-lactamase superfamily JC776_11640 PF05343 M42 glutamyl aminopeptidase JC776_11660 PF01931 Protein of unknown function DUF84 JC776_11665 PF00085 Thioredoxin JC776_11670 PF07285 Protein of unknown function (DUF1444) JC776_11675 PF14794 Domain of unknown function (DUF4479) JC776_11675 PF01588 Putative tRNA binding domain JC776_11685 PF17854 FtsK alpha domain JC776_11685 PF09397 Ftsk gamma domain JC776_11685 PF01580 FtsK/SpoIIIE family JC776_11695 PF01225 Mur ligase family, catalytic domain JC776_11695 PF02875 Mur ligase family, glutamate ligase domain JC776_11695 PF08245 Mur ligase middle domain JC776_11710 PF02073 Thermophilic metalloprotease (M29) JC776_11720 PF11009 Protein of unknown function (DUF2847) JC776_11725 PF00793 DAHP synthetase I family JC776_11725 PF01817 Chorismate mutase type II JC776_11730 PF00356 Bacterial regulatory proteins, lacI family JC776_11740 PF01741 Large-conductance mechanosensitive channel, MscL JC776_11745 PF00850 Histone deacetylase domain JC776_11750 PF00571 CBS domain JC776_11755 PF00583 Acetyltransferase (GNAT) family JC776_11760 PF00501 AMP-binding enzyme JC776_11760 PF13193 AMP-binding enzyme C-terminal domain JC776_11765 PF01479 S4 domain JC776_11765 PF00579 tRNA synthetases class I (W and Y) JC776_11795 PF00163 Ribosomal protein S4/S9 N-terminal domain JC776_11795 PF01479 S4 domain JC776_11800 PF01053 Cys/Met metabolism PLP-dependent enzyme JC776_11805 PF13185 GAF domain JC776_11810 PF00440 Bacterial regulatory proteins, tetR family JC776_11815 PF00892 EamA-like transporter family JC776_11820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JC776_11820 PF03466 LysR substrate binding domain JC776_11825 PF06160 Septation ring formation regulator, EzrA JC776_11830 PF00266 Aminotransferase class-V JC776_11835 PF02568 Thiamine biosynthesis protein (ThiI) JC776_11835 PF02926 THUMP domain JC776_11840 PF00269 Small, acid-soluble spore proteins, alpha/beta type JC776_11845 PF00501 AMP-binding enzyme JC776_11845 PF13193 AMP-binding enzyme C-terminal domain JC776_11850 PF07969 Amidohydrolase family JC776_11855 PF01513 ATP-NAD kinase JC776_11865 PF09579 Sporulation protein YtfJ (Spore_YtfJ) JC776_11870 PF08534 Redoxin JC776_11875 PF02384 N-6 DNA Methylase JC776_11880 PF00871 Acetokinase family JC776_11890 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JC776_11890 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JC776_11900 PF00764 Arginosuccinate synthase JC776_11905 PF14698 Argininosuccinate lyase C-terminal JC776_11905 PF00206 Lyase JC776_11925 PF00582 Universal stress protein family JC776_11935 PF05222 Alanine dehydrogenase/PNT, N-terminal domain JC776_11935 PF01262 Alanine dehydrogenase/PNT, C-terminal domain JC776_11955 PF01321 Creatinase/Prolidase N-terminal domain JC776_11955 PF00557 Metallopeptidase family M24 JC776_11965 PF07085 DRTGG domain JC776_11965 PF00571 CBS domain JC776_11965 PF03061 Thioesterase superfamily JC776_11965 PF00392 Bacterial regulatory proteins, gntR family JC776_11975 PF02272 DHHA1 domain JC776_11975 PF01368 DHH family JC776_11985 PF14034 Sporulation protein YtrH JC776_11990 PF07733 Bacterial DNA polymerase III alpha NTPase domain JC776_11990 PF14579 Helix-hairpin-helix motif JC776_11990 PF01336 OB-fold nucleic acid binding domain JC776_11990 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JC776_11990 PF02811 PHP domain JC776_11995 PF03949 Malic enzyme, NAD binding domain JC776_11995 PF00390 Malic enzyme, N-terminal domain JC776_12000 PF00392 Bacterial regulatory proteins, gntR family JC776_12005 PF01039 Carboxyl transferase domain JC776_12005 PF17848 Acetyl-coA carboxylase zinc finger domain JC776_12010 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit JC776_12015 PF00365 Phosphofructokinase JC776_12020 PF00391 PEP-utilising enzyme, mobile domain JC776_12020 PF02887 Pyruvate kinase, alpha/beta domain JC776_12020 PF00224 Pyruvate kinase, barrel domain JC776_12025 PF04186 FxsA cytoplasmic membrane protein JC776_12030 PF01594 AI-2E family transporter JC776_12035 PF04284 Protein of unknown function (DUF441) JC776_12040 PF00285 Citrate synthase, C-terminal domain JC776_12045 PF00180 Isocitrate/isopropylmalate dehydrogenase JC776_12050 PF00056 lactate/malate dehydrogenase, NAD binding domain JC776_12050 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain JC776_12065 PF00072 Response regulator receiver domain JC776_12065 PF00486 Transcriptional regulatory protein, C terminal JC776_12070 PF00989 PAS fold JC776_12070 PF00512 His Kinase A (phospho-acceptor) domain JC776_12070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC776_12070 PF16736 Single Cache-like JC776_12075 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain JC776_12075 PF00476 DNA polymerase family A JC776_12075 PF01367 5'-3' exonuclease, C-terminal SAM fold JC776_12080 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain JC776_12080 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain JC776_12080 PF06827 Zinc finger found in FPG and IleRS JC776_12085 PF02659 Putative manganese efflux pump JC776_12090 PF01121 Dephospho-CoA kinase JC776_12095 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain JC776_12095 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain JC776_12100 PF02675 S-adenosylmethionine decarboxylase JC776_12105 PF03477 ATP cone domain JC776_12110 PF07261 Replication initiation and membrane attachment JC776_12115 PF01695 IstB-like ATP binding protein JC776_12115 PF07319 Primosomal protein DnaI N-terminus JC776_12120 PF08812 YtxC-like family JC776_12125 PF03129 Anticodon binding domain JC776_12125 PF02824 TGS domain JC776_12125 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JC776_12125 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JC776_12130 PF00707 Translation initiation factor IF-3, C-terminal domain JC776_12130 PF05198 Translation initiation factor IF-3, N-terminal domain JC776_12135 PF01632 Ribosomal protein L35 JC776_12140 PF00453 Ribosomal protein L20 JC776_12150 PF05343 M42 glutamyl aminopeptidase JC776_12155 PF16859 Tetracyclin repressor-like, C-terminal domain JC776_12155 PF00440 Bacterial regulatory proteins, tetR family JC776_12165 PF07690 Major Facilitator Superfamily JC776_12175 PF01966 HD domain JC776_12180 PF14098 Small, acid-soluble spore protein I JC776_12185 PF00588 SpoU rRNA Methylase family JC776_12185 PF08032 RNA 2'-O ribose methyltransferase substrate binding JC776_12190 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain JC776_12190 PF01409 tRNA synthetases class II core domain (F) JC776_12195 PF01588 Putative tRNA binding domain JC776_12195 PF03483 B3/4 domain JC776_12195 PF03484 tRNA synthetase B5 domain JC776_12195 PF03147 Ferredoxin-fold anticodon binding domain JC776_12195 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain JC776_12200 PF01336 OB-fold nucleic acid binding domain JC776_12200 PF00152 tRNA synthetases class II (D, K and N) JC776_12210 PF11858 Domain of unknown function (DUF3378) JC776_12210 PF01351 Ribonuclease HII JC776_12215 PF05164 Cell division protein ZapA JC776_12220 PF02674 Colicin V production protein JC776_12225 PF02811 PHP domain JC776_12225 PF14716 Helix-hairpin-helix domain JC776_12225 PF14791 DNA polymerase beta thumb JC776_12230 PF01713 Smr domain JC776_12230 PF00488 MutS domain V JC776_12235 PF01479 S4 domain JC776_12235 PF00849 RNA pseudouridylate synthase JC776_12240 PF05525 Branched-chain amino acid transport protein JC776_12245 PF17785 PUA-like domain JC776_12245 PF10672 S-adenosylmethionine-dependent methyltransferase JC776_12250 PF09962 Uncharacterized conserved protein (DUF2196) JC776_12260 PF00486 Transcriptional regulatory protein, C terminal JC776_12260 PF00072 Response regulator receiver domain JC776_12265 PF00512 His Kinase A (phospho-acceptor) domain JC776_12265 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC776_12270 PF00005 ABC transporter JC776_12290 PF05163 DinB family JC776_12300 PF00501 AMP-binding enzyme JC776_12300 PF13193 AMP-binding enzyme C-terminal domain JC776_12305 PF00440 Bacterial regulatory proteins, tetR family JC776_12305 PF08359 YsiA-like protein, C-terminal region JC776_12310 PF00378 Enoyl-CoA hydratase/isomerase JC776_12315 PF01012 Electron transfer flavoprotein domain JC776_12320 PF01012 Electron transfer flavoprotein domain JC776_12320 PF00766 Electron transfer flavoprotein FAD-binding domain JC776_12325 PF00085 Thioredoxin JC776_12335 PF01541 GIY-YIG catalytic domain JC776_12335 PF02151 UvrB/uvrC motif JC776_12335 PF08459 UvrC Helix-hairpin-helix N-terminal JC776_12340 PF10702 Protein of unknown function (DUF2507) JC776_12345 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit JC776_12350 PF00890 FAD binding domain JC776_12350 PF02910 Fumarate reductase flavoprotein C-term JC776_12355 PF13085 2Fe-2S iron-sulfur cluster binding domain JC776_12355 PF13183 4Fe-4S dicluster domain JC776_12365 PF02557 D-alanyl-D-alanine carboxypeptidase JC776_12370 PF01618 MotA/TolQ/ExbB proton channel family JC776_12375 PF13677 Membrane MotB of proton-channel complex MotA/MotB JC776_12375 PF00691 OmpA family JC776_12380 PF00005 ABC transporter JC776_12380 PF13732 Domain of unknown function (DUF4162) JC776_12390 PF02082 Transcriptional regulator JC776_12400 PF00196 Bacterial regulatory proteins, luxR family JC776_12405 PF01177 Asp/Glu/Hydantoin racemase JC776_12410 PF10646 Sporulation and spore germination JC776_12415 PF01138 3' exoribonuclease family, domain 1 JC776_12415 PF03725 3' exoribonuclease family, domain 2 JC776_12420 PF01725 Ham1 family JC776_12425 PF12850 Calcineurin-like phosphoesterase superfamily domain JC776_12470 PF01695 IstB-like ATP binding protein JC776_12485 PF00440 Bacterial regulatory proteins, tetR family JC776_12495 PF03176 MMPL family JC776_12500 PF00501 AMP-binding enzyme JC776_12500 PF13193 AMP-binding enzyme C-terminal domain JC776_12500 PF00668 Condensation domain JC776_12500 PF00550 Phosphopantetheine attachment site JC776_12510 PF14765 Polyketide synthase dehydratase JC776_12510 PF00550 Phosphopantetheine attachment site JC776_12510 PF08659 KR domain JC776_12510 PF00109 Beta-ketoacyl synthase, N-terminal domain JC776_12510 PF02801 Beta-ketoacyl synthase, C-terminal domain JC776_12510 PF00668 Condensation domain JC776_12510 PF13193 AMP-binding enzyme C-terminal domain JC776_12510 PF00501 AMP-binding enzyme JC776_12510 PF16197 Ketoacyl-synthetase C-terminal extension JC776_12515 PF00698 Acyl transferase domain JC776_12520 PF01648 4'-phosphopantetheinyl transferase superfamily JC776_12535 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JC776_12535 PF05698 Bacterial trigger factor protein (TF) C-terminus JC776_12535 PF05697 Bacterial trigger factor protein (TF) JC776_12540 PF07724 AAA domain (Cdc48 subfamily) JC776_12540 PF10431 C-terminal, D2-small domain, of ClpB protein JC776_12540 PF06689 ClpX C4-type zinc finger JC776_12545 PF00004 ATPase family associated with various cellular activities (AAA) JC776_12545 PF05362 Lon protease (S16) C-terminal proteolytic domain JC776_12550 PF05362 Lon protease (S16) C-terminal proteolytic domain JC776_12550 PF02190 ATP-dependent protease La (LON) substrate-binding domain JC776_12550 PF00004 ATPase family associated with various cellular activities (AAA) JC776_12555 PF01926 50S ribosome-binding GTPase JC776_12560 PF01488 Shikimate / quinate 5-dehydrogenase JC776_12560 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain JC776_12560 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain JC776_12565 PF01578 Cytochrome C assembly protein JC776_12570 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain JC776_12570 PF03900 Porphobilinogen deaminase, C-terminal domain JC776_12575 PF02602 Uroporphyrinogen-III synthase HemD JC776_12580 PF00490 Delta-aminolevulinic acid dehydratase JC776_12585 PF00202 Aminotransferase class-III JC776_12590 PF01476 LysM domain JC776_12590 PF01476 LysM domain JC776_12605 PF08264 Anticodon-binding domain of tRNA JC776_12605 PF00133 tRNA synthetases class I (I, L, M and V) JC776_12605 PF10458 Valyl tRNA synthetase tRNA binding arm JC776_12610 PF08245 Mur ligase middle domain JC776_12610 PF02875 Mur ligase family, glutamate ligase domain JC776_12620 PF02545 Maf-like protein JC776_12625 PF04002 RadC-like JAB domain JC776_12645 PF04085 rod shape-determining protein MreC JC776_12655 PF03775 Septum formation inhibitor MinC, C-terminal domain JC776_12660 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain JC776_12665 PF01551 Peptidase family M23 JC776_12670 PF02163 Peptidase family M50 JC776_12675 PF10150 Ribonuclease E/G family JC776_12675 PF00575 S1 RNA binding domain JC776_12680 PF00829 Ribosomal prokaryotic L21 protein JC776_12685 PF04327 Cysteine protease Prp JC776_12690 PF01016 Ribosomal L27 protein JC776_12695 PF14682 Sporulation initiation phospho-transferase B, C-terminal JC776_12695 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain JC776_12700 PF09269 Domain of unknown function (DUF1967) JC776_12700 PF01018 GTP1/OBG JC776_12700 PF01926 50S ribosome-binding GTPase JC776_12705 PF00486 Transcriptional regulatory protein, C terminal JC776_12705 PF00072 Response regulator receiver domain JC776_12710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC776_12715 PF00005 ABC transporter JC776_12720 PF02687 FtsX-like permease family JC776_12725 PF02687 FtsX-like permease family JC776_12730 PF01842 ACT domain JC776_12730 PF00800 Prephenate dehydratase JC776_12735 PF03475 3-alpha domain JC776_12735 PF03473 MOSC domain JC776_12740 PF02829 3H domain JC776_12740 PF08279 HTH domain JC776_12745 PF00266 Aminotransferase class-V JC776_12750 PF02910 Fumarate reductase flavoprotein C-term JC776_12750 PF00890 FAD binding domain JC776_12755 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain JC776_12755 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain JC776_12760 PF02445 Quinolinate synthetase A protein JC776_12765 PF01476 LysM domain JC776_12780 PF01497 Periplasmic binding protein JC776_12785 PF07499 RuvA, C-terminal domain JC776_12785 PF01330 RuvA N terminal domain JC776_12790 PF17864 RuvB AAA lid domain JC776_12790 PF05491 RuvB C-terminal winged helix domain JC776_12790 PF05496 Holliday junction DNA helicase RuvB P-loop domain JC776_12795 PF11146 Protein of unknown function (DUF2905) JC776_12800 PF02547 Queuosine biosynthesis protein JC776_12805 PF01702 Queuine tRNA-ribosyltransferase JC776_12810 PF02699 Preprotein translocase subunit JC776_12830 PF01943 Polysaccharide biosynthesis protein JC776_12830 PF14667 Polysaccharide biosynthesis C-terminal domain JC776_12835 PF13797 Post-transcriptional regulator JC776_12840 PF02355 Protein export membrane protein JC776_12840 PF07549 SecD/SecF GG Motif JC776_12845 PF01545 Cation efflux family JC776_12845 PF16916 Dimerisation domain of Zinc Transporter JC776_12850 PF01368 DHH family JC776_12850 PF17768 RecJ OB domain JC776_12850 PF10141 Single-strand DNA-specific exonuclease, C terminal domain JC776_12850 PF02272 DHHA1 domain JC776_12855 PF00156 Phosphoribosyl transferase domain JC776_12860 PF13291 ACT domain JC776_12860 PF04607 Region found in RelA / SpoT proteins JC776_12860 PF02824 TGS domain JC776_12865 PF02580 D-Tyr-tRNA(Tyr) deacylase JC776_12885 PF03129 Anticodon binding domain JC776_12885 PF13393 Histidyl-tRNA synthetase JC776_12890 PF00152 tRNA synthetases class II (D, K and N) JC776_12890 PF01336 OB-fold nucleic acid binding domain JC776_12890 PF02938 GAD domain JC776_12895 PF00899 ThiF family JC776_12905 PF17853 GGDEF-like domain JC776_12905 PF12833 Helix-turn-helix domain JC776_12925 PF16193 AAA C-terminal domain JC776_12925 PF05496 Holliday junction DNA helicase RuvB P-loop domain JC776_12925 PF12002 MgsA AAA+ ATPase C terminal JC776_12930 PF02082 Transcriptional regulator JC776_12935 PF00266 Aminotransferase class-V JC776_12950 PF14490 Helix-hairpin-helix containing domain JC776_12950 PF13538 UvrD-like helicase C-terminal domain JC776_12950 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain JC776_12970 PF01594 AI-2E family transporter JC776_12975 PF01411 tRNA synthetases class II (A) JC776_12975 PF02272 DHHA1 domain JC776_12975 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JC776_12980 PF06135 IreB regulatory phosphoprotein JC776_12985 PF03652 Holliday junction resolvase JC776_12990 PF06949 Protein of unknown function (DUF1292) JC776_12995 PF02618 YceG-like family JC776_13000 PF01596 O-methyltransferase JC776_13005 PF01136 Peptidase family U32 JC776_13010 PF01136 Peptidase family U32 JC776_13010 PF16325 Peptidase family U32 C-terminal domain JC776_13015 PF00485 Phosphoribulokinase / Uridine kinase family JC776_13020 PF03449 Transcription elongation factor, N-terminal JC776_13020 PF01272 Transcription elongation factor, GreA/GreB, C-term JC776_13030 PF00905 Penicillin binding protein transpeptidase domain JC776_13030 PF03717 Penicillin-binding Protein dimerisation domain JC776_13040 PF10750 Protein of unknown function (DUF2536) JC776_13045 PF08241 Methyltransferase domain JC776_13050 PF01048 Phosphorylase superfamily JC776_13055 PF00291 Pyridoxal-phosphate dependent enzyme JC776_13060 PF01053 Cys/Met metabolism PLP-dependent enzyme JC776_13070 PF00356 Bacterial regulatory proteins, lacI family JC776_13090 PF07681 DoxX JC776_13095 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JC776_13100 PF01329 Pterin 4 alpha carbinolamine dehydratase JC776_13105 PF00351 Biopterin-dependent aromatic amino acid hydroxylase JC776_13130 PF08386 TAP-like protein JC776_13130 PF00561 alpha/beta hydrolase fold JC776_13135 PF00583 Acetyltransferase (GNAT) family JC776_13140 PF00245 Alkaline phosphatase JC776_13145 PF04607 Region found in RelA / SpoT proteins JC776_13150 PF00471 Ribosomal protein L33 JC776_13160 PF04542 Sigma-70 region 2 JC776_13160 PF04545 Sigma-70, region 4 JC776_13165 PF02666 Phosphatidylserine decarboxylase JC776_13180 PF01926 50S ribosome-binding GTPase JC776_13185 PF08501 Shikimate dehydrogenase substrate binding domain JC776_13185 PF18317 Shikimate 5'-dehydrogenase C-terminal domain JC776_13185 PF01488 Shikimate / quinate 5-dehydrogenase JC776_13190 PF01985 CRS1 / YhbY (CRM) domain JC776_13195 PF01467 Cytidylyltransferase-like JC776_13200 PF01966 HD domain JC776_13210 PF13649 Methyltransferase domain JC776_13215 PF03807 NADP oxidoreductase coenzyme F420-dependent JC776_13215 PF14748 Pyrroline-5-carboxylate reductase dimerisation JC776_13220 PF10531 SLBB domain JC776_13225 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JC776_13230 PF03772 Competence protein JC776_13230 PF13567 Domain of unknown function (DUF4131) JC776_13230 PF00753 Metallo-beta-lactamase superfamily JC776_13235 PF14141 YqzM-like protein JC776_13240 PF06144 DNA polymerase III, delta subunit JC776_13245 PF01649 Ribosomal protein S20 JC776_13250 PF03418 Germination protease JC776_13255 PF12438 Protein of unknown function (DUF3679) JC776_13260 PF00009 Elongation factor Tu GTP binding domain JC776_13260 PF00679 Elongation factor G C-terminus JC776_13260 PF06421 GTP-binding protein LepA C-terminus JC776_13260 PF03144 Elongation factor Tu domain 2 JC776_13265 PF01965 DJ-1/PfpI family JC776_13270 PF01638 HxlR-like helix-turn-helix JC776_13275 PF06969 HemN C-terminal domain JC776_13275 PF04055 Radical SAM superfamily JC776_13280 PF01628 HrcA protein C terminal domain JC776_13285 PF01025 GrpE JC776_13290 PF00012 Hsp70 protein JC776_13295 PF00684 DnaJ central domain JC776_13295 PF00226 DnaJ domain JC776_13295 PF01556 DnaJ C terminal domain JC776_13305 PF04452 RNA methyltransferase JC776_13310 PF00919 Uncharacterized protein family UPF0004 JC776_13310 PF01938 TRAM domain JC776_13310 PF04055 Radical SAM superfamily JC776_13315 PF01165 Ribosomal protein S21 JC776_13320 PF09424 Yqey-like protein JC776_13325 PF07873 YabP family JC776_13330 PF06898 Putative stage IV sporulation protein YqfD JC776_13335 PF02562 PhoH-like protein JC776_13340 PF07698 7TM receptor with intracellular HD hydrolase JC776_13340 PF07697 7TM-HD extracellular JC776_13340 PF01966 HD domain JC776_13345 PF02130 Uncharacterized protein family UPF0054 JC776_13350 PF01219 Prokaryotic diacylglycerol kinase JC776_13360 PF01926 50S ribosome-binding GTPase JC776_13360 PF07650 KH domain JC776_13370 PF02565 Recombination protein O C terminal JC776_13370 PF11967 Recombination protein O N terminal JC776_13375 PF00571 CBS domain JC776_13375 PF08279 HTH domain JC776_13380 PF03618 Kinase/pyrophosphorylase JC776_13385 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 JC776_13390 PF01807 CHC2 zinc finger JC776_13390 PF08275 DNA primase catalytic core, N-terminal domain JC776_13390 PF10410 DnaB-helicase binding domain of primase JC776_13395 PF00140 Sigma-70 factor, region 1.2 JC776_13395 PF03979 Sigma-70 factor, region 1.1 JC776_13395 PF04539 Sigma-70 region 3 JC776_13395 PF04545 Sigma-70, region 4 JC776_13395 PF04542 Sigma-70 region 2 JC776_13400 PF13442 Cytochrome C oxidase, cbb3-type, subunit III JC776_13405 PF04816 tRNA (adenine(22)-N(1))-methyltransferase JC776_13410 PF01784 NIF3 (NGG1p interacting factor 3) JC776_13415 PF02401 LytB protein JC776_13425 PF00270 DEAD/DEAH box helicase JC776_13425 PF00271 Helicase conserved C-terminal domain JC776_13430 PF01261 Xylose isomerase-like TIM barrel JC776_13440 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JC776_13440 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JC776_13445 PF00005 ABC transporter JC776_13450 PF00950 ABC 3 transport family JC776_13455 PF01475 Ferric uptake regulator family JC776_13460 PF04551 GcpE protein JC776_13480 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain JC776_13480 PF02777 Iron/manganese superoxide dismutases, C-terminal domain JC776_13485 PF07690 Major Facilitator Superfamily JC776_13490 PF03717 Penicillin-binding Protein dimerisation domain JC776_13490 PF00905 Penicillin binding protein transpeptidase domain JC776_13495 PF12849 PBP superfamily domain JC776_13500 PF00528 Binding-protein-dependent transport system inner membrane component JC776_13505 PF00528 Binding-protein-dependent transport system inner membrane component JC776_13510 PF00005 ABC transporter JC776_13515 PF01895 PhoU domain JC776_13520 PF00483 Nucleotidyl transferase JC776_13525 PF00471 Ribosomal protein L33 JC776_13530 PF01812 5-formyltetrahydrofolate cyclo-ligase family JC776_13535 PF06014 Bacterial protein of unknown function (DUF910) JC776_13540 PF00480 ROK family JC776_13545 PF10958 Protein of unknown function (DUF2759) JC776_13550 PF00753 Metallo-beta-lactamase superfamily JC776_13560 PF01022 Bacterial regulatory protein, arsR family JC776_13565 PF01053 Cys/Met metabolism PLP-dependent enzyme JC776_13570 PF01053 Cys/Met metabolism PLP-dependent enzyme JC776_13575 PF02219 Methylenetetrahydrofolate reductase JC776_13575 PF02574 Homocysteine S-methyltransferase JC776_13580 PF02574 Homocysteine S-methyltransferase JC776_13580 PF02310 B12 binding domain JC776_13580 PF02607 B12 binding domain JC776_13580 PF02965 Vitamin B12 dependent methionine synthase, activation domain JC776_13580 PF00809 Pterin binding enzyme JC776_13595 PF01966 HD domain JC776_13615 PF00375 Sodium:dicarboxylate symporter family JC776_13620 PF11117 Protein of unknown function (DUF2626) JC776_13630 PF02796 Helix-turn-helix domain of resolvase JC776_13630 PF00239 Resolvase, N terminal domain JC776_13640 PF01381 Helix-turn-helix JC776_13800 PF03592 Terminase small subunit JC776_13880 PF05105 Bacteriophage holin family JC776_13885 PF12123 N-acetylmuramoyl-l-alanine amidase JC776_13885 PF01510 N-acetylmuramoyl-L-alanine amidase JC776_13910 PF00482 Type II secretion system (T2SS), protein F JC776_13935 PF01202 Shikimate kinase JC776_13940 PF14038 YqzE-like protein JC776_13960 PF11079 Bacterial protein YqhG of unknown function JC776_13965 PF00271 Helicase conserved C-terminal domain JC776_13965 PF00176 SNF2 family N-terminal domain JC776_13970 PF01571 Aminomethyltransferase folate-binding domain JC776_13970 PF08669 Glycine cleavage T-protein C-terminal barrel domain JC776_13975 PF02347 Glycine cleavage system P-protein JC776_13980 PF02347 Glycine cleavage system P-protein JC776_13995 PF00392 Bacterial regulatory proteins, gntR family JC776_14000 PF00005 ABC transporter JC776_14020 PF00893 Small Multidrug Resistance protein JC776_14025 PF00893 Small Multidrug Resistance protein JC776_14035 PF00356 Bacterial regulatory proteins, lacI family JC776_14035 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family JC776_14045 PF00581 Rhodanese-like domain JC776_14050 PF03099 Biotin/lipoate A/B protein ligase family JC776_14060 PF02742 Iron dependent repressor, metal binding and dimerisation domain JC776_14060 PF01325 Iron dependent repressor, N-terminal DNA binding domain JC776_14070 PF07136 Protein of unknown function (DUF1385) JC776_14075 PF11085 Conserved membrane protein YqhR JC776_14080 PF01220 Dehydroquinase class II JC776_14085 PF00557 Metallopeptidase family M24 JC776_14085 PF01321 Creatinase/Prolidase N-terminal domain JC776_14090 PF09285 Elongation factor P, C-terminal JC776_14090 PF01132 Elongation factor P (EF-P) OB domain JC776_14090 PF08207 Elongation factor P (EF-P) KOW-like domain JC776_14115 PF09548 Stage III sporulation protein AB (spore_III_AB) JC776_14120 PF06686 Stage III sporulation protein AC/AD protein family JC776_14125 PF06686 Stage III sporulation protein AC/AD protein family JC776_14130 PF09546 Stage III sporulation protein AE (spore_III_AE) JC776_14135 PF09581 Stage III sporulation protein AF (Spore_III_AF) JC776_14145 PF12685 SpoIIIAH-like protein JC776_14155 PF00364 Biotin-requiring enzyme JC776_14160 PF02785 Biotin carboxylase C-terminal domain JC776_14160 PF00289 Biotin carboxylase, N-terminal domain JC776_14160 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JC776_14165 PF03780 Asp23 family, cell envelope-related function JC776_14170 PF01029 NusB family JC776_14175 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain JC776_14175 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain JC776_14180 PF02601 Exonuclease VII, large subunit JC776_14180 PF13742 OB-fold nucleic acid binding domain JC776_14185 PF02609 Exonuclease VII small subunit JC776_14190 PF00348 Polyprenyl synthetase JC776_14195 PF02780 Transketolase, C-terminal domain JC776_14195 PF02779 Transketolase, pyrimidine binding domain JC776_14195 PF13292 1-deoxy-D-xylulose-5-phosphate synthase JC776_14200 PF01728 FtsJ-like methyltransferase JC776_14200 PF01479 S4 domain JC776_14205 PF01316 Arginine repressor, DNA binding domain JC776_14205 PF02863 Arginine repressor, C-terminal domain JC776_14210 PF13476 AAA domain JC776_14215 PF17820 PDZ domain JC776_14215 PF05580 SpoIVB peptidase S55 JC776_14220 PF08769 Sporulation initiation factor Spo0A C terminal JC776_14220 PF00072 Response regulator receiver domain JC776_14225 PF14174 YycC-like protein JC776_14230 PF03009 Glycerophosphoryl diester phosphodiesterase family JC776_14235 PF11118 Protein of unknown function (DUF2627) JC776_14240 PF00158 Sigma-54 interaction domain JC776_14240 PF02954 Bacterial regulatory protein, Fis family JC776_14240 PF00989 PAS fold JC776_14245 PF01515 Phosphate acetyl/butaryl transferase JC776_14250 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain JC776_14250 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase JC776_14255 PF00871 Acetokinase family JC776_14260 PF07992 Pyridine nucleotide-disulphide oxidoreductase JC776_14260 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JC776_14265 PF00676 Dehydrogenase E1 component JC776_14270 PF02780 Transketolase, C-terminal domain JC776_14270 PF02779 Transketolase, pyrimidine binding domain JC776_14275 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JC776_14275 PF00364 Biotin-requiring enzyme JC776_14275 PF02817 e3 binding domain JC776_14280 PF01098 Cell cycle protein JC776_14285 PF09297 NADH pyrophosphatase zinc ribbon domain JC776_14285 PF00293 NUDIX domain JC776_14290 PF11208 Protein of unknown function (DUF2992) JC776_14295 PF06491 Disulphide isomerase JC776_14300 PF00497 Bacterial extracellular solute-binding proteins, family 3 JC776_14305 PF00528 Binding-protein-dependent transport system inner membrane component JC776_14310 PF00005 ABC transporter JC776_14315 PF11728 Putative aromatic acid exporter C-terminal domain JC776_14315 PF06081 Aromatic acid exporter family member 1 JC776_14320 PF03734 L,D-transpeptidase catalytic domain JC776_14335 PF13302 Acetyltransferase (GNAT) domain JC776_14340 PF07687 Peptidase dimerisation domain JC776_14340 PF01546 Peptidase family M20/M25/M40 JC776_14345 PF00817 impB/mucB/samB family JC776_14345 PF11799 impB/mucB/samB family C-terminal domain JC776_14345 PF11798 IMS family HHH motif JC776_14350 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) JC776_14360 PF12706 Beta-lactamase superfamily domain JC776_14360 PF00753 Metallo-beta-lactamase superfamily JC776_14370 PF01842 ACT domain JC776_14370 PF03315 Serine dehydratase beta chain JC776_14375 PF03313 Serine dehydratase alpha chain JC776_14380 PF03807 NADP oxidoreductase coenzyme F420-dependent JC776_14380 PF14748 Pyrroline-5-carboxylate reductase dimerisation JC776_14385 PF00753 Metallo-beta-lactamase superfamily JC776_14390 PF00106 short chain dehydrogenase JC776_14400 PF01118 Semialdehyde dehydrogenase, NAD binding domain JC776_14400 PF02774 Semialdehyde dehydrogenase, dimerisation domain JC776_14405 PF01960 ArgJ family JC776_14410 PF00696 Amino acid kinase family JC776_14415 PF00202 Aminotransferase class-III JC776_14420 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JC776_14420 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JC776_14440 PF00149 Calcineurin-like phosphoesterase JC776_14440 PF02872 5'-nucleotidase, C-terminal domain JC776_14445 PF03553 Na+/H+ antiporter family JC776_14455 PF00202 Aminotransferase class-III JC776_14465 PF00155 Aminotransferase class I and II JC776_14470 PF00561 alpha/beta hydrolase fold JC776_14475 PF13847 Methyltransferase domain JC776_14480 PF04055 Radical SAM superfamily JC776_14480 PF06968 Biotin and Thiamin Synthesis associated domain JC776_14490 PF00885 6,7-dimethyl-8-ribityllumazine synthase JC776_14495 PF00925 GTP cyclohydrolase II JC776_14495 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase JC776_14500 PF00677 Lumazine binding domain JC776_14505 PF01872 RibD C-terminal domain JC776_14505 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JC776_14515 PF10827 Protein of unknown function (DUF2552) JC776_14520 PF12146 Serine aminopeptidase, S33 JC776_14525 PF00583 Acetyltransferase (GNAT) family JC776_14530 PF00356 Bacterial regulatory proteins, lacI family JC776_14535 PF13726 Na+-H+ antiporter family JC776_14535 PF03553 Na+/H+ antiporter family JC776_14540 PF12146 Serine aminopeptidase, S33 JC776_14550 PF02872 5'-nucleotidase, C-terminal domain JC776_14550 PF00746 LPXTG cell wall anchor motif JC776_14550 PF00149 Calcineurin-like phosphoesterase JC776_14550 PF00565 Staphylococcal nuclease homologue JC776_14560 PF13673 Acetyltransferase (GNAT) domain JC776_14560 PF04229 GrpB protein JC776_14565 PF00248 Aldo/keto reductase family JC776_14570 PF00248 Aldo/keto reductase family JC776_14575 PF13072 Mother cell inhibitor of FtsZ JC776_14580 PF00293 NUDIX domain JC776_14590 PF01944 Stage II sporulation protein M JC776_14595 PF01475 Ferric uptake regulator family JC776_14600 PF14004 Protein of unknown function (DUF4227) JC776_14605 PF00589 Phage integrase family JC776_14605 PF02899 Phage integrase, N-terminal SAM-like domain JC776_14610 PF13115 YtkA-like JC776_14615 PF01676 Metalloenzyme superfamily JC776_14620 PF01048 Phosphorylase superfamily JC776_14625 PF02885 Glycosyl transferase family, helical bundle domain JC776_14625 PF00591 Glycosyl transferase family, a/b domain JC776_14625 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain JC776_14630 PF01544 CorA-like Mg2+ transporter protein JC776_14635 PF00860 Permease family JC776_14645 PF01047 MarR family JC776_14665 PF00005 ABC transporter JC776_14670 PF00392 Bacterial regulatory proteins, gntR family JC776_14675 PF00768 D-alanyl-D-alanine carboxypeptidase JC776_14675 PF07943 Penicillin-binding protein 5, C-terminal domain JC776_14680 PF01740 STAS domain JC776_14685 PF13581 Histidine kinase-like ATPase domain JC776_14690 PF04539 Sigma-70 region 3 JC776_14690 PF04545 Sigma-70, region 4 JC776_14690 PF04542 Sigma-70 region 2 JC776_14695 PF00209 Sodium:neurotransmitter symporter family JC776_14705 PF12164 Stage V sporulation protein AA JC776_14710 PF13782 Stage V sporulation protein AB JC776_14715 PF03862 SpoVAC/SpoVAEB sporulation membrane protein JC776_14720 PF07451 Stage V sporulation protein AD (SpoVAD) JC776_14725 PF03862 SpoVAC/SpoVAEB sporulation membrane protein JC776_14730 PF14097 Stage V sporulation protein AE1 JC776_14735 PF03323 Bacillus/Clostridium GerA spore germination protein JC776_14745 PF06207 Protein of unknown function (DUF1002) JC776_14750 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD JC776_14755 PF00583 Acetyltransferase (GNAT) family JC776_14760 PF03745 Domain of unknown function (DUF309) JC776_14770 PF02616 Segregation and condensation protein ScpA JC776_14775 PF04079 Segregation and condensation complex subunit ScpB JC776_14785 PF01979 Amidohydrolase family JC776_14790 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase JC776_14795 PF00392 Bacterial regulatory proteins, gntR family JC776_14795 PF07702 UTRA domain JC776_14805 PF03123 CAT RNA binding domain JC776_14805 PF00874 PRD domain JC776_14810 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JC776_14810 PF00367 phosphotransferase system, EIIB JC776_14810 PF02378 Phosphotransferase system, EIIC JC776_14815 PF00381 PTS HPr component phosphorylation site JC776_14820 PF02896 PEP-utilising enzyme, TIM barrel domain JC776_14820 PF00391 PEP-utilising enzyme, mobile domain JC776_14820 PF05524 PEP-utilising enzyme, N-terminal JC776_14835 PF00881 Nitroreductase family JC776_14840 PF00990 Diguanylate cyclase, GGDEF domain JC776_14840 PF08448 PAS fold JC776_14845 PF00144 Beta-lactamase JC776_14850 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase JC776_14850 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JC776_14865 PF03079 ARD/ARD' family JC776_14870 PF00596 Class II Aldolase and Adducin N-terminal domain JC776_14880 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain JC776_14880 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain JC776_14885 PF00155 Aminotransferase class I and II JC776_14890 PF00795 Carbon-nitrogen hydrolase JC776_14895 PF01636 Phosphotransferase enzyme family JC776_14900 PF01008 Initiation factor 2 subunit family JC776_14915 PF03551 Transcriptional regulator PadR-like family JC776_14940 PF02803 Thiolase, C-terminal domain JC776_14940 PF00108 Thiolase, N-terminal domain JC776_14955 PF06271 RDD family JC776_14965 PF00005 ABC transporter JC776_14965 PF17912 MalK OB fold domain JC776_14965 PF03459 TOBE domain JC776_14970 PF00128 Alpha amylase, catalytic domain JC776_14970 PF16657 Maltogenic Amylase, C-terminal domain JC776_14975 PF00128 Alpha amylase, catalytic domain JC776_14975 PF02903 Alpha amylase, N-terminal ig-like domain JC776_14975 PF16657 Maltogenic Amylase, C-terminal domain JC776_14980 PF13416 Bacterial extracellular solute-binding protein JC776_14985 PF00528 Binding-protein-dependent transport system inner membrane component JC776_14990 PF00528 Binding-protein-dependent transport system inner membrane component JC776_14995 PF00356 Bacterial regulatory proteins, lacI family JC776_14995 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family JC776_15000 PF00155 Aminotransferase class I and II JC776_15010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC776_15010 PF00512 His Kinase A (phospho-acceptor) domain JC776_15020 PF14040 Deoxyribonuclease NucA/NucB JC776_15030 PF08267 Cobalamin-independent synthase, N-terminal domain JC776_15030 PF01717 Cobalamin-independent synthase, Catalytic domain JC776_15035 PF07690 Major Facilitator Superfamily JC776_15055 PF01522 Polysaccharide deacetylase JC776_15065 PF14177 YkyB-like protein JC776_15075 PF13089 Polyphosphate kinase N-terminal domain JC776_15075 PF13090 Polyphosphate kinase C-terminal domain 2 JC776_15075 PF02503 Polyphosphate kinase middle domain JC776_15075 PF17941 Polyphosphate kinase C-terminal domain 1 JC776_15085 PF00149 Calcineurin-like phosphoesterase JC776_15085 PF10518 TAT (twin-arginine translocation) pathway signal sequence JC776_15095 PF00563 EAL domain JC776_15095 PF10388 EAL-domain associated signalling protein domain JC776_15110 PF08796 Protein of unknown function (DUF1797) JC776_15115 PF04308 Ribonuclease H-like JC776_15130 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JC776_15130 PF03466 LysR substrate binding domain JC776_15135 PF00132 Bacterial transferase hexapeptide (six repeats) JC776_15135 PF14602 Hexapeptide repeat of succinyl-transferase JC776_15135 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal JC776_15140 PF07687 Peptidase dimerisation domain JC776_15140 PF01546 Peptidase family M20/M25/M40 JC776_15150 PF02080 TrkA-C domain JC776_15150 PF02254 TrkA-N domain JC776_15155 PF00753 Metallo-beta-lactamase superfamily JC776_15155 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain JC776_15155 PF17770 Ribonuclease J C-terminal domain JC776_15160 PF07288 Protein of unknown function (DUF1447) JC776_15170 PF01327 Polypeptide deformylase JC776_15180 PF00676 Dehydrogenase E1 component JC776_15185 PF02779 Transketolase, pyrimidine binding domain JC776_15185 PF02780 Transketolase, C-terminal domain JC776_15190 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JC776_15190 PF00364 Biotin-requiring enzyme JC776_15190 PF02817 e3 binding domain JC776_15195 PF07992 Pyridine nucleotide-disulphide oxidoreductase JC776_15195 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JC776_15220 PF13790 SR1 protein JC776_15230 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain JC776_15230 PF01276 Orn/Lys/Arg decarboxylase, major domain JC776_15235 PF05256 Uncharacterised protein family (UPF0223) JC776_15240 PF06335 Protein of unknown function (DUF1054) JC776_15250 PF00459 Inositol monophosphatase family JC776_15260 PF00679 Elongation factor G C-terminus JC776_15260 PF14492 Elongation Factor G, domain II JC776_15260 PF00009 Elongation factor Tu GTP binding domain JC776_15260 PF03144 Elongation factor Tu domain 2 JC776_15265 PF14036 YlaH-like protein JC776_15275 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) JC776_15285 PF02562 PhoH-like protein JC776_15285 PF13638 PIN domain JC776_15295 PF07408 Protein of unknown function (DUF1507) JC776_15300 PF01098 Cell cycle protein JC776_15305 PF00364 Biotin-requiring enzyme JC776_15305 PF02436 Conserved carboxylase domain JC776_15305 PF02785 Biotin carboxylase C-terminal domain JC776_15305 PF00682 HMGL-like JC776_15305 PF00289 Biotin carboxylase, N-terminal domain JC776_15305 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JC776_15310 PF02628 Cytochrome oxidase assembly protein JC776_15315 PF01040 UbiA prenyltransferase family JC776_15320 PF00034 Cytochrome c JC776_15320 PF02790 Cytochrome C oxidase subunit II, transmembrane domain JC776_15320 PF00116 Cytochrome C oxidase subunit II, periplasmic domain JC776_15325 PF00115 Cytochrome C and Quinol oxidase polypeptide I JC776_15330 PF00510 Cytochrome c oxidase subunit III JC776_15335 PF03626 Prokaryotic Cytochrome C oxidase subunit IV JC776_15340 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) JC776_15345 PF08868 YugN-like family JC776_15350 PF00188 Cysteine-rich secretory protein family JC776_15350 PF14504 CAP-associated N-terminal JC776_15355 PF14071 Putative coat protein JC776_15360 PF14003 YlbE-like protein JC776_15365 PF00300 Histidine phosphatase superfamily (branch 1) JC776_15370 PF06133 Control of competence regulator ComK, YlbF/YmcA JC776_15375 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) JC776_15390 PF01467 Cytidylyltransferase-like JC776_15395 PF07670 Nucleoside recognition JC776_15400 PF01734 Patatin-like phospholipase JC776_15405 PF13180 PDZ domain JC776_15405 PF05362 Lon protease (S16) C-terminal proteolytic domain JC776_15410 PF05636 HIGH Nucleotidyl Transferase JC776_15415 PF14659 Phage integrase, N-terminal SAM-like domain JC776_15415 PF00589 Phage integrase family JC776_15465 PF09588 YqaJ-like viral recombinase domain JC776_15475 PF03837 RecT family JC776_15510 PF00692 dUTPase JC776_15600 PF03354 Phage Terminase JC776_15675 PF01510 N-acetylmuramoyl-L-alanine amidase JC776_15675 PF13457 GW (Gly-Tryp) dipeptide domain JC776_15710 PF02620 Large ribosomal RNA subunit accumulation protein YceD JC776_15715 PF01783 Ribosomal L32p protein family JC776_15725 PF00583 Acetyltransferase (GNAT) family JC776_15730 PF02558 Ketopantoate reductase PanE/ApbA JC776_15730 PF08546 Ketopantoate reductase PanE/ApbA C terminal JC776_15735 PF10079 Bacillithiol biosynthesis BshC JC776_15740 PF01795 MraW methylase family JC776_15745 PF04977 Septum formation initiator JC776_15750 PF03717 Penicillin-binding Protein dimerisation domain JC776_15750 PF03793 PASTA domain JC776_15750 PF00905 Penicillin binding protein transpeptidase domain JC776_15755 PF03717 Penicillin-binding Protein dimerisation domain JC776_15755 PF00905 Penicillin binding protein transpeptidase domain JC776_15755 PF03793 PASTA domain JC776_15760 PF01225 Mur ligase family, catalytic domain JC776_15760 PF08245 Mur ligase middle domain JC776_15760 PF02875 Mur ligase family, glutamate ligase domain JC776_15765 PF00953 Glycosyl transferase family 4 JC776_15765 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 JC776_15770 PF02875 Mur ligase family, glutamate ligase domain JC776_15770 PF08245 Mur ligase middle domain JC776_15775 PF01098 Cell cycle protein JC776_15780 PF03033 Glycosyltransferase family 28 N-terminal domain JC776_15780 PF04101 Glycosyltransferase family 28 C-terminal domain JC776_15785 PF01565 FAD binding domain JC776_15785 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain JC776_15790 PF03799 Cell division protein FtsQ JC776_15790 PF08478 POTRA domain, FtsQ-type JC776_15795 PF02491 SHS2 domain inserted in FTSA JC776_15800 PF12327 FtsZ family, C-terminal domain JC776_15800 PF00091 Tubulin/FtsZ family, GTPase domain JC776_15805 PF03419 Sporulation factor SpoIIGA JC776_15810 PF04542 Sigma-70 region 2 JC776_15810 PF04545 Sigma-70, region 4 JC776_15815 PF04542 Sigma-70 region 2 JC776_15815 PF04539 Sigma-70 region 3 JC776_15815 PF04545 Sigma-70, region 4 JC776_15820 PF05239 PRC-barrel domain JC776_15825 PF02578 Multi-copper polyphenol oxidoreductase laccase JC776_15830 PF01168 Alanine racemase, N-terminal domain JC776_15835 PF04472 Cell division protein SepF JC776_15840 PF02325 YGGT family JC776_15845 PF17774 Putative RNA-binding domain in YlmH JC776_15845 PF01479 S4 domain JC776_15850 PF05103 DivIVA protein JC776_15855 PF00133 tRNA synthetases class I (I, L, M and V) JC776_15855 PF06827 Zinc finger found in FPG and IleRS JC776_15855 PF08264 Anticodon-binding domain of tRNA JC776_15865 PF01252 Signal peptidase (SPase) II JC776_15870 PF01479 S4 domain JC776_15870 PF00849 RNA pseudouridylate synthase JC776_15875 PF00156 Phosphoribosyl transferase domain JC776_15880 PF00860 Permease family JC776_15885 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JC776_15885 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JC776_15890 PF01979 Amidohydrolase family JC776_15895 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain JC776_15895 PF00117 Glutamine amidotransferase class-I JC776_15900 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JC776_15900 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain JC776_15900 PF02142 MGS-like domain JC776_15905 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B JC776_15905 PF00970 Oxidoreductase FAD-binding domain JC776_15910 PF01180 Dihydroorotate dehydrogenase JC776_15915 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family JC776_15920 PF00156 Phosphoribosyl transferase domain JC776_15940 PF05670 NFACT protein RNA binding domain JC776_15945 PF00690 Cation transporter/ATPase, N-terminus JC776_15945 PF00689 Cation transporting ATPase, C-terminus JC776_15950 PF08340 Domain of unknown function (DUF1732) JC776_15950 PF03755 YicC-like family, N-terminal region JC776_15955 PF04025 Domain of unknown function (DUF370) JC776_15960 PF00625 Guanylate kinase JC776_15965 PF01192 RNA polymerase Rpb6 JC776_15970 PF04127 DNA / pantothenate metabolism flavoprotein JC776_15970 PF02441 Flavoprotein JC776_15975 PF17764 3′ DNA-binding domain (3′BD) JC776_15975 PF18319 PriA DNA helicase Cys-rich region (CRR) domain JC776_15975 PF00271 Helicase conserved C-terminal domain JC776_15975 PF18074 Primosomal protein N C-terminal domain JC776_15975 PF04851 Type III restriction enzyme, res subunit JC776_15980 PF01327 Polypeptide deformylase JC776_15985 PF02911 Formyl transferase, C-terminal domain JC776_15985 PF00551 Formyl transferase JC776_15990 PF01189 16S rRNA methyltransferase RsmB/F JC776_15990 PF01029 NusB family JC776_15995 PF04055 Radical SAM superfamily JC776_16005 PF00069 Protein kinase domain JC776_16005 PF03793 PASTA domain JC776_16010 PF03193 RsgA GTPase JC776_16010 PF16745 RsgA N-terminal domain JC776_16015 PF00834 Ribulose-phosphate 3 epimerase family JC776_16020 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain JC776_16020 PF04263 Thiamin pyrophosphokinase, catalytic domain JC776_16025 PF08183 Stage V sporulation protein family JC776_16030 PF00830 Ribosomal L28 family JC776_16035 PF03780 Asp23 family, cell envelope-related function JC776_16040 PF13684 Dihydroxyacetone kinase family JC776_16040 PF02734 DAK2 domain JC776_16045 PF00270 DEAD/DEAH box helicase JC776_16045 PF00271 Helicase conserved C-terminal domain JC776_16045 PF17191 RecG wedge domain JC776_16050 PF03061 Thioesterase superfamily JC776_16055 PF02504 Fatty acid synthesis protein JC776_16060 PF00698 Acyl transferase domain JC776_16070 PF00550 Phosphopantetheine attachment site JC776_16075 PF00035 Double-stranded RNA binding motif JC776_16075 PF14622 Ribonuclease-III-like JC776_16080 PF06470 SMC proteins Flexible Hinge Domain JC776_16080 PF02463 RecF/RecN/SMC N terminal domain JC776_16085 PF00448 SRP54-type protein, GTPase domain JC776_16085 PF02881 SRP54-type protein, helical bundle domain JC776_16090 PF04297 Putative helix-turn-helix protein, YlxM / p13 like JC776_16095 PF02978 Signal peptide binding domain JC776_16095 PF02881 SRP54-type protein, helical bundle domain JC776_16095 PF00448 SRP54-type protein, GTPase domain JC776_16100 PF00886 Ribosomal protein S16 JC776_16110 PF05239 PRC-barrel domain JC776_16110 PF01782 RimM N-terminal domain JC776_16115 PF01746 tRNA (Guanine-1)-methyltransferase JC776_16120 PF01245 Ribosomal protein L19 JC776_16125 PF10502 Signal peptidase, peptidase S26 JC776_16130 PF01926 50S ribosome-binding GTPase JC776_16135 PF01351 Ribonuclease HII JC776_16140 PF08442 ATP-grasp domain JC776_16140 PF00549 CoA-ligase JC776_16145 PF02629 CoA binding domain JC776_16145 PF00549 CoA-ligase JC776_16150 PF02481 DNA recombination-mediator protein A JC776_16155 PF01751 Toprim domain JC776_16155 PF01396 Topoisomerase DNA binding C4 zinc finger JC776_16155 PF01131 DNA topoisomerase JC776_16160 PF01134 Glucose inhibited division protein A JC776_16165 PF02899 Phage integrase, N-terminal SAM-like domain JC776_16165 PF00589 Phage integrase family JC776_16170 PF00227 Proteasome subunit JC776_16175 PF10431 C-terminal, D2-small domain, of ClpB protein JC776_16175 PF07724 AAA domain (Cdc48 subfamily) JC776_16180 PF08222 CodY helix-turn-helix domain JC776_16180 PF06018 CodY GAF-like domain JC776_16185 PF00318 Ribosomal protein S2 JC776_16190 PF00889 Elongation factor TS JC776_16195 PF00696 Amino acid kinase family JC776_16200 PF01765 Ribosome recycling factor JC776_16205 PF01255 Putative undecaprenyl diphosphate synthase JC776_16215 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain JC776_16215 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase JC776_16215 PF13288 DXP reductoisomerase C-terminal domain JC776_16220 PF13180 PDZ domain JC776_16220 PF02163 Peptidase family M50 JC776_16225 PF04073 Aminoacyl-tRNA editing domain JC776_16225 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JC776_16225 PF03129 Anticodon binding domain JC776_16230 PF11490 DNA polymerase III polC-type N-terminus II JC776_16230 PF07733 Bacterial DNA polymerase III alpha NTPase domain JC776_16230 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JC776_16230 PF14579 Helix-hairpin-helix motif JC776_16230 PF02811 PHP domain JC776_16230 PF14480 DNA polymerase III polC-type N-terminus I JC776_16230 PF00929 Exonuclease JC776_16235 PF17384 RimP C-terminal SH3 domain JC776_16235 PF02576 RimP N-terminal domain JC776_16240 PF13184 NusA-like KH domain JC776_16240 PF08529 NusA N-terminal domain JC776_16240 PF00575 S1 RNA binding domain JC776_16245 PF04296 Protein of unknown function (DUF448) JC776_16250 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family JC776_16255 PF00009 Elongation factor Tu GTP binding domain JC776_16255 PF11987 Translation-initiation factor 2 JC776_16255 PF04760 Translation initiation factor IF-2, N-terminal region JC776_16260 PF04456 Protein of unknown function (DUF503) JC776_16265 PF02033 Ribosome-binding factor A JC776_16270 PF16198 tRNA pseudouridylate synthase B C-terminal domain JC776_16270 PF01509 TruB family pseudouridylate synthase (N terminal domain) JC776_16275 PF06574 FAD synthetase JC776_16275 PF01687 Riboflavin kinase JC776_16280 PF00312 Ribosomal protein S15 JC776_16285 PF00013 KH domain JC776_16285 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain JC776_16285 PF01138 3' exoribonuclease family, domain 1 JC776_16285 PF03725 3' exoribonuclease family, domain 2 JC776_16285 PF00575 S1 RNA binding domain JC776_16290 PF01522 Polysaccharide deacetylase JC776_16295 PF05193 Peptidase M16 inactive domain JC776_16295 PF00675 Insulinase (Peptidase family M16) JC776_16300 PF05239 PRC-barrel domain JC776_16305 PF16924 Dipicolinate synthase subunit A N-terminal domain JC776_16305 PF01262 Alanine dehydrogenase/PNT, C-terminal domain JC776_16310 PF02441 Flavoprotein JC776_16315 PF01118 Semialdehyde dehydrogenase, NAD binding domain JC776_16315 PF02774 Semialdehyde dehydrogenase, dimerisation domain JC776_16320 PF00696 Amino acid kinase family JC776_16320 PF13840 ACT domain JC776_16325 PF00701 Dihydrodipicolinate synthetase family JC776_16335 PF17770 Ribonuclease J C-terminal domain JC776_16335 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain JC776_16335 PF00753 Metallo-beta-lactamase superfamily JC776_16360 PF00574 Clp protease JC776_16380 PF01580 FtsK/SpoIIIE family JC776_16380 PF17854 FtsK alpha domain JC776_16380 PF09397 Ftsk gamma domain JC776_16385 PF00392 Bacterial regulatory proteins, gntR family JC776_16385 PF07702 UTRA domain JC776_16390 PF02608 ABC transporter substrate-binding protein PnrA-like JC776_16395 PF00005 ABC transporter JC776_16400 PF02653 Branched-chain amino acid transport system / permease component JC776_16405 PF02653 Branched-chain amino acid transport system / permease component JC776_16410 PF05193 Peptidase M16 inactive domain JC776_16415 PF00675 Insulinase (Peptidase family M16) JC776_16415 PF05193 Peptidase M16 inactive domain JC776_16425 PF11588 Protein of unknown function (DUF3243) JC776_16430 PF11868 Protein of unknown function (DUF3388) JC776_16435 PF13464 Domain of unknown function (DUF4115) JC776_16440 PF01066 CDP-alcohol phosphatidyltransferase JC776_16445 PF02464 Competence-damaged protein JC776_16445 PF18146 Damage-inducible protein CinA KH domain JC776_16445 PF00994 Probable molybdopterin binding domain JC776_16450 PF00154 recA bacterial DNA recombination protein JC776_16455 PF01966 HD domain JC776_16455 PF00013 KH domain JC776_16455 PF12072 Domain of unknown function (DUF3552) JC776_16460 PF13277 YmdB-like protein JC776_16465 PF04232 Stage V sporulation protein S (SpoVS) JC776_16470 PF01244 Membrane dipeptidase (Peptidase family M19) JC776_16475 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II JC776_16475 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase JC776_16475 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg JC776_16480 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JC776_16490 PF12867 DinB superfamily JC776_16495 PF01541 GIY-YIG catalytic domain JC776_16500 PF01266 FAD dependent oxidoreductase JC776_16505 PF10676 Spore germination protein gerPA/gerPF JC776_16520 PF00344 SecY translocase JC776_16525 PF01965 DJ-1/PfpI family JC776_16540 PF07486 Cell Wall Hydrolase JC776_16540 PF01471 Putative peptidoglycan binding domain JC776_16545 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin JC776_16545 PF18277 AbrB C-terminal domain JC776_16560 PF08361 MAATS-type transcriptional repressor, C-terminal region JC776_16560 PF00440 Bacterial regulatory proteins, tetR family JC776_16570 PF01648 4'-phosphopantetheinyl transferase superfamily JC776_16575 PF00067 Cytochrome P450 JC776_16580 PF00999 Sodium/hydrogen exchanger family JC776_16590 PF00109 Beta-ketoacyl synthase, N-terminal domain JC776_16590 PF00550 Phosphopantetheine attachment site JC776_16590 PF02801 Beta-ketoacyl synthase, C-terminal domain JC776_16590 PF00668 Condensation domain JC776_16590 PF13193 AMP-binding enzyme C-terminal domain JC776_16590 PF00501 AMP-binding enzyme JC776_16590 PF00202 Aminotransferase class-III JC776_16590 PF16197 Ketoacyl-synthetase C-terminal extension JC776_16605 PF01494 FAD binding domain JC776_16610 PF00550 Phosphopantetheine attachment site JC776_16615 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III JC776_16615 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal JC776_16630 PF07739 TipAS antibiotic-recognition domain JC776_16630 PF13411 MerR HTH family regulatory protein JC776_16650 PF01966 HD domain JC776_16655 PF00072 Response regulator receiver domain JC776_16655 PF00486 Transcriptional regulatory protein, C terminal JC776_16660 PF00989 PAS fold JC776_16660 PF00512 His Kinase A (phospho-acceptor) domain JC776_16660 PF16736 Single Cache-like JC776_16660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC776_16665 PF00768 D-alanyl-D-alanine carboxypeptidase JC776_16665 PF07943 Penicillin-binding protein 5, C-terminal domain JC776_16675 PF00535 Glycosyl transferase family 2 JC776_16685 PF16177 Acetyl-coenzyme A synthetase N-terminus JC776_16685 PF00501 AMP-binding enzyme JC776_16685 PF13193 AMP-binding enzyme C-terminal domain JC776_16690 PF01039 Carboxyl transferase domain JC776_16695 PF00378 Enoyl-CoA hydratase/isomerase JC776_16700 PF00682 HMGL-like JC776_16705 PF00364 Biotin-requiring enzyme JC776_16710 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JC776_16710 PF00289 Biotin carboxylase, N-terminal domain JC776_16710 PF02785 Biotin carboxylase C-terminal domain JC776_16715 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JC776_16715 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JC776_16715 PF02770 Acyl-CoA dehydrogenase, middle domain JC776_16725 PF07687 Peptidase dimerisation domain JC776_16725 PF01546 Peptidase family M20/M25/M40 JC776_16730 PF04439 Streptomycin adenylyltransferase JC776_16750 PF14171 Toxin SpoIISA, type II toxin-antitoxin system JC776_16755 PF00300 Histidine phosphatase superfamily (branch 1) JC776_16765 PF00270 DEAD/DEAH box helicase JC776_16765 PF00271 Helicase conserved C-terminal domain JC776_16775 PF01869 BadF/BadG/BcrA/BcrD ATPase family JC776_16785 PF02378 Phosphotransferase system, EIIC JC776_16795 PF02638 Glycosyl hydrolase-like 10 JC776_16810 PF01596 O-methyltransferase JC776_16820 PF13291 ACT domain JC776_16820 PF02824 TGS domain JC776_16820 PF04607 Region found in RelA / SpoT proteins JC776_16825 PF00664 ABC transporter transmembrane region JC776_16825 PF00005 ABC transporter JC776_16830 PF00664 ABC transporter transmembrane region JC776_16830 PF00005 ABC transporter JC776_16850 PF00313 'Cold-shock' DNA-binding domain JC776_16860 PF00248 Aldo/keto reductase family JC776_16865 PF01593 Flavin containing amine oxidoreductase JC776_16905 PF03129 Anticodon binding domain JC776_16905 PF02824 TGS domain JC776_16905 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JC776_16905 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JC776_16910 PF16291 Domain of unknown function (DUF4937 JC776_16925 PF00216 Bacterial DNA-binding protein JC776_16940 PF07690 Major Facilitator Superfamily JC776_16945 PF03621 MbtH-like protein JC776_16950 PF13193 AMP-binding enzyme C-terminal domain JC776_16950 PF00668 Condensation domain JC776_16950 PF00550 Phosphopantetheine attachment site JC776_16950 PF00975 Thioesterase domain JC776_16950 PF00501 AMP-binding enzyme JC776_16955 PF00857 Isochorismatase family JC776_16955 PF00550 Phosphopantetheine attachment site JC776_16960 PF00501 AMP-binding enzyme JC776_16960 PF13193 AMP-binding enzyme C-terminal domain JC776_16965 PF00425 chorismate binding enzyme JC776_16970 PF00106 short chain dehydrogenase JC776_17000 PF18801 response regulator aspartate phosphatase H, N terminal JC776_17010 PF01609 Transposase DDE domain JC776_17020 PF01022 Bacterial regulatory protein, arsR family JC776_17025 PF14552 Tautomerase enzyme JC776_17035 PF03466 LysR substrate binding domain JC776_17035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JC776_17045 PF12679 ABC-2 family transporter protein JC776_17050 PF13732 Domain of unknown function (DUF4162) JC776_17050 PF00005 ABC transporter JC776_17060 PF00550 Phosphopantetheine attachment site JC776_17060 PF00668 Condensation domain JC776_17060 PF00501 AMP-binding enzyme JC776_17060 PF13193 AMP-binding enzyme C-terminal domain JC776_17070 PF00005 ABC transporter JC776_17075 PF00975 Thioesterase domain JC776_17080 PF00501 AMP-binding enzyme JC776_17080 PF13193 AMP-binding enzyme C-terminal domain JC776_17080 PF00668 Condensation domain JC776_17080 PF00550 Phosphopantetheine attachment site JC776_17080 PF00975 Thioesterase domain JC776_17085 PF00501 AMP-binding enzyme JC776_17085 PF13193 AMP-binding enzyme C-terminal domain JC776_17085 PF00668 Condensation domain JC776_17085 PF00550 Phosphopantetheine attachment site JC776_17090 PF00501 AMP-binding enzyme JC776_17090 PF00668 Condensation domain JC776_17090 PF00550 Phosphopantetheine attachment site JC776_17090 PF13193 AMP-binding enzyme C-terminal domain JC776_17105 PF00854 POT family JC776_17110 PF13476 AAA domain JC776_17115 PF00149 Calcineurin-like phosphoesterase JC776_17115 PF12320 Type 5 capsule protein repressor C-terminal domain JC776_17120 PF10763 Protein of unknown function (DUF2584) JC776_17130 PF00378 Enoyl-CoA hydratase/isomerase JC776_17135 PF01810 LysE type translocator JC776_17145 PF00171 Aldehyde dehydrogenase family JC776_17150 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase JC776_17150 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JC776_17155 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JC776_17155 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JC776_17155 PF02770 Acyl-CoA dehydrogenase, middle domain JC776_17165 PF03972 MmgE/PrpD family JC776_17170 PF00285 Citrate synthase, C-terminal domain JC776_17180 PF00905 Penicillin binding protein transpeptidase domain JC776_17180 PF00912 Transglycosylase JC776_17195 PF10676 Spore germination protein gerPA/gerPF JC776_17200 PF18496 Collagenase G catalytic helper subdomain JC776_17200 PF01752 Collagenase JC776_17200 PF08453 Peptidase family M9 N-terminal JC776_17205 PF08892 YqcI/YcgG family JC776_17210 PF01810 LysE type translocator JC776_17220 PF12697 Alpha/beta hydrolase family JC776_17225 PF01569 PAP2 superfamily JC776_17230 PF04239 Protein of unknown function (DUF421) JC776_17235 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase JC776_17240 PF00149 Calcineurin-like phosphoesterase JC776_17255 PF04072 Leucine carboxyl methyltransferase JC776_17265 PF10711 Hypothetical protein (DUF2513) JC776_17295 PF00085 Thioredoxin JC776_17300 PF16916 Dimerisation domain of Zinc Transporter JC776_17300 PF01545 Cation efflux family JC776_17305 PF01569 PAP2 superfamily JC776_17310 PF00805 Pentapeptide repeats (8 copies) JC776_17310 PF00069 Protein kinase domain JC776_17320 PF14162 YozD-like protein JC776_17335 PF06855 YozE SAM-like fold JC776_17340 PF14122 YokU-like protein, putative antitoxin JC776_17345 PF12544 Lysine-2,3-aminomutase JC776_17350 PF02954 Bacterial regulatory protein, Fis family JC776_17350 PF13426 PAS domain JC776_17350 PF00158 Sigma-54 interaction domain JC776_17355 PF00583 Acetyltransferase (GNAT) family JC776_17360 PF07687 Peptidase dimerisation domain JC776_17360 PF01546 Peptidase family M20/M25/M40 JC776_17365 PF01144 Coenzyme A transferase JC776_17370 PF01144 Coenzyme A transferase JC776_17375 PF00202 Aminotransferase class-III JC776_17390 PF09385 Histidine kinase N terminal JC776_17395 PF07997 Protein of unknown function (DUF1694) JC776_17400 PF00571 CBS domain JC776_17400 PF03471 Transporter associated domain JC776_17400 PF01595 Cyclin M transmembrane N-terminal domain JC776_17410 PF03063 Prismane/CO dehydrogenase family JC776_17435 PF13520 Amino acid permease JC776_17450 PF03358 NADPH-dependent FMN reductase JC776_17465 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain JC776_17465 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JC776_17470 PF02447 GntP family permease JC776_17475 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JC776_17475 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JC776_17480 PF01418 Helix-turn-helix domain, rpiR family JC776_17480 PF01380 SIS domain JC776_17490 PF00011 Hsp20/alpha crystallin family JC776_17505 PF00881 Nitroreductase family JC776_17510 PF01063 Amino-transferase class IV JC776_17520 PF00733 Asparagine synthase JC776_17520 PF13537 Glutamine amidotransferase domain JC776_17525 PF00011 Hsp20/alpha crystallin family JC776_17530 PF02630 SCO1/SenC JC776_17540 PF02645 Uncharacterised protein, DegV family COG1307 JC776_17550 PF00902 Sec-independent protein translocase protein (TatC) JC776_17555 PF02416 mttA/Hcf106 family JC776_17560 PF03006 Haemolysin-III related JC776_17565 PF01553 Acyltransferase JC776_17570 PF02525 Flavodoxin-like fold JC776_17575 PF05223 NTF2-like N-terminal transpeptidase domain JC776_17575 PF03717 Penicillin-binding Protein dimerisation domain JC776_17575 PF00905 Penicillin binding protein transpeptidase domain JC776_17580 PF00186 Dihydrofolate reductase JC776_17585 PF00303 Thymidylate synthase JC776_17590 PF00144 Beta-lactamase JC776_17590 PF07930 D-aminopeptidase, domain B JC776_17600 PF14005 YpjP-like protein JC776_17605 PF05975 Bacterial ABC transporter protein EcsB JC776_17610 PF00005 ABC transporter JC776_17625 PF00583 Acetyltransferase (GNAT) family JC776_17630 PF01980 tRNA-methyltransferase O JC776_17645 PF10997 Alternate to MurJ JC776_17655 PF05977 Transmembrane secretion effector JC776_17660 PF00899 ThiF family JC776_17670 PF00561 alpha/beta hydrolase fold JC776_17675 PF00209 Sodium:neurotransmitter symporter family JC776_17685 PF03485 Arginyl tRNA synthetase N terminal domain JC776_17685 PF05746 DALR anticodon binding domain JC776_17685 PF00750 tRNA synthetases class I (R) JC776_17690 PF04445 Putative SAM-dependent methyltransferase JC776_17695 PF06491 Disulphide isomerase JC776_17705 PF08712 Scaffold protein Nfu/NifU N terminal JC776_17705 PF13769 Virulence factor JC776_17710 PF00436 Single-strand binding protein family JC776_17720 PF16326 ABC transporter C-terminal domain JC776_17720 PF12848 ABC transporter JC776_17720 PF00005 ABC transporter JC776_17725 PF01966 HD domain JC776_17765 PF01451 Low molecular weight phosphotyrosine protein phosphatase JC776_17770 PF01758 Sodium Bile acid symporter family JC776_17775 PF01022 Bacterial regulatory protein, arsR family JC776_17785 PF07504 Fungalysin/Thermolysin Propeptide Motif JC776_17785 PF03413 Peptidase propeptide and YPEB domain JC776_17785 PF01447 Thermolysin metallopeptidase, catalytic domain JC776_17785 PF02868 Thermolysin metallopeptidase, alpha-helical domain JC776_17795 PF00255 Glutathione peroxidase JC776_17805 PF00271 Helicase conserved C-terminal domain JC776_17805 PF00270 DEAD/DEAH box helicase JC776_17815 PF01268 Formate--tetrahydrofolate ligase JC776_17820 PF01209 ubiE/COQ5 methyltransferase family JC776_17845 PF09579 Sporulation protein YtfJ (Spore_YtfJ) JC776_17895 PF12538 DNA transporter JC776_17895 PF01580 FtsK/SpoIIIE family JC776_17900 PF10140 WXG100 protein secretion system (Wss), protein YukC JC776_17920 PF06013 Proteins of 100 residues with WXG JC776_17945 PF00583 Acetyltransferase (GNAT) family JC776_17950 PF00155 Aminotransferase class I and II JC776_17950 PF00392 Bacterial regulatory proteins, gntR family JC776_17955 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase JC776_17960 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase JC776_17965 PF00842 Alanine racemase, C-terminal domain JC776_17965 PF01168 Alanine racemase, N-terminal domain JC776_18000 PF01145 SPFH domain / Band 7 family JC776_18015 PF02557 D-alanyl-D-alanine carboxypeptidase JC776_18025 PF07454 Stage II sporulation protein P (SpoIIP) JC776_18060 PF01510 N-acetylmuramoyl-L-alanine amidase JC776_18085 PF01554 MatE JC776_18095 PF13186 Iron-sulfur cluster-binding domain JC776_18095 PF04055 Radical SAM superfamily JC776_18100 PF00665 Integrase core domain JC776_18100 PF13936 Helix-turn-helix domain JC776_18110 PF12802 MarR family JC776_18120 PF11337 Protein of unknown function (DUF3139) JC776_18165 PF18801 response regulator aspartate phosphatase H, N terminal JC776_18190 PF00501 AMP-binding enzyme JC776_18190 PF13193 AMP-binding enzyme C-terminal domain JC776_18195 PF02272 DHHA1 domain JC776_18195 PF01411 tRNA synthetases class II (A) JC776_18195 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JC776_18205 PF10787 Uncharacterised protein from bacillus cereus group JC776_18210 PF00011 Hsp20/alpha crystallin family JC776_18215 PF08179 Small acid-soluble spore protein P family JC776_18225 PF01522 Polysaccharide deacetylase JC776_18235 PF00694 Aconitase C-terminal domain JC776_18235 PF00330 Aconitase family (aconitate hydratase) JC776_18245 PF13443 Cro/C1-type HTH DNA-binding domain JC776_18250 PF00578 AhpC/TSA family JC776_18255 PF11490 DNA polymerase III polC-type N-terminus II JC776_18255 PF07733 Bacterial DNA polymerase III alpha NTPase domain JC776_18255 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JC776_18255 PF14579 Helix-hairpin-helix motif JC776_18255 PF02811 PHP domain JC776_18255 PF00929 Exonuclease JC776_18255 PF01336 OB-fold nucleic acid binding domain JC776_18260 PF13040 Fur-regulated basic protein B JC776_18265 PF08177 Small acid-soluble spore protein N family JC776_18275 PF01476 LysM domain JC776_18275 PF00704 Glycosyl hydrolases family 18 JC776_18280 PF03061 Thioesterase superfamily JC776_18290 PF01521 Iron-sulphur cluster biosynthesis JC776_18295 PF02660 Glycerol-3-phosphate acyltransferase JC776_18300 PF03477 ATP cone domain JC776_18300 PF13597 Anaerobic ribonucleoside-triphosphate reductase JC776_18305 PF04055 Radical SAM superfamily JC776_18310 PF00072 Response regulator receiver domain JC776_18310 PF00486 Transcriptional regulatory protein, C terminal JC776_18315 PF13180 PDZ domain JC776_18320 PF13380 CoA binding domain JC776_18325 PF00204 DNA gyrase B JC776_18325 PF00986 DNA gyrase B subunit, carboxyl terminus JC776_18325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC776_18325 PF01751 Toprim domain JC776_18330 PF00521 DNA gyrase/topoisomerase IV, subunit A JC776_18330 PF03989 DNA gyrase C-terminal domain, beta-propeller JC776_18335 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JC776_18335 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JC776_18340 PF00375 Sodium:dicarboxylate symporter family JC776_18345 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JC776_18350 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JC776_18355 PF08241 Methyltransferase domain JC776_18390 PF00892 EamA-like transporter family JC776_18395 PF02681 Divergent PAP2 family JC776_18400 PF13243 Squalene-hopene cyclase C-terminal domain JC776_18400 PF13249 Squalene-hopene cyclase N-terminal domain JC776_18405 PF14151 YfhD-like protein JC776_18410 PF00171 Aldehyde dehydrogenase family JC776_18415 PF06196 Protein of unknown function (DUF997) JC776_18420 PF00474 Sodium:solute symporter family JC776_18435 PF08924 Domain of unknown function (DUF1906) JC776_18435 PF01471 Putative peptidoglycan binding domain JC776_18440 PF01156 Inosine-uridine preferring nucleoside hydrolase JC776_18450 PF14698 Argininosuccinate lyase C-terminal JC776_18450 PF00206 Lyase JC776_18455 PF00106 short chain dehydrogenase JC776_18465 PF00313 'Cold-shock' DNA-binding domain JC776_18470 PF00082 Subtilase family JC776_18490 PF00589 Phage integrase family JC776_18490 PF14659 Phage integrase, N-terminal SAM-like domain JC776_18540 PF07319 Primosomal protein DnaI N-terminus JC776_18540 PF01695 IstB-like ATP binding protein JC776_18655 PF02075 Crossover junction endodeoxyribonuclease RuvC JC776_18835 PF04688 SPP1 phage holin JC776_18865 PF13037 Domain of unknown function (DUF3898) JC776_18865 PF13039 Protein of unknown function (DUF3900) JC776_18875 PF04294 VanW like protein JC776_18880 PF02308 MgtC family JC776_18885 PF02913 FAD linked oxidases, C-terminal domain JC776_18885 PF01565 FAD binding domain JC776_18890 PF02696 Uncharacterized ACR, YdiU/UPF0061 family JC776_18895 PF01447 Thermolysin metallopeptidase, catalytic domain JC776_18895 PF03413 Peptidase propeptide and YPEB domain JC776_18895 PF07504 Fungalysin/Thermolysin Propeptide Motif JC776_18895 PF02868 Thermolysin metallopeptidase, alpha-helical domain JC776_18900 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading JC776_18920 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JC776_18920 PF08447 PAS fold JC776_18920 PF13426 PAS domain JC776_18930 PF13302 Acetyltransferase (GNAT) domain JC776_18935 PF03009 Glycerophosphoryl diester phosphodiesterase family JC776_18945 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JC776_18945 PF03466 LysR substrate binding domain JC776_18950 PF07690 Major Facilitator Superfamily JC776_18955 PF01432 Peptidase family M3 JC776_18955 PF08439 Oligopeptidase F JC776_18960 PF00797 N-acetyltransferase JC776_18965 PF01713 Smr domain JC776_18965 PF00488 MutS domain V JC776_18975 PF03600 Citrate transporter JC776_18980 PF08830 Protein of unknown function (DUF1806) JC776_18985 PF02585 GlcNAc-PI de-N-acetylase JC776_19035 PF01695 IstB-like ATP binding protein JC776_19060 PF12704 MacB-like periplasmic core domain JC776_19060 PF00005 ABC transporter JC776_19060 PF02687 FtsX-like permease family JC776_19065 PF02687 FtsX-like permease family JC776_19065 PF12704 MacB-like periplasmic core domain JC776_19105 PF00589 Phage integrase family JC776_19185 PF06906 Protein of unknown function (DUF1272) JC776_19190 PF13411 MerR HTH family regulatory protein JC776_19195 PF01595 Cyclin M transmembrane N-terminal domain JC776_19195 PF03471 Transporter associated domain JC776_19195 PF00571 CBS domain JC776_19205 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JC776_19210 PF06039 Malate:quinone oxidoreductase (Mqo) JC776_19215 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JC776_19215 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JC776_19220 PF06445 GyrI-like small molecule binding domain JC776_19225 PF07690 Major Facilitator Superfamily JC776_19245 PF13288 DXP reductoisomerase C-terminal domain JC776_19245 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase JC776_19245 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain JC776_19260 PF13350 Tyrosine phosphatase family JC776_19280 PF00005 ABC transporter JC776_19300 PF04073 Aminoacyl-tRNA editing domain JC776_19325 PF00005 ABC transporter JC776_19335 PF14256 YwiC-like protein JC776_19355 PF02667 Short chain fatty acid transporter JC776_19360 PF00144 Beta-lactamase JC776_19365 PF07690 Major Facilitator Superfamily JC776_19370 PF01047 MarR family JC776_19375 PF00561 alpha/beta hydrolase fold JC776_19385 PF07690 Major Facilitator Superfamily JC776_19390 PF14044 NETI protein JC776_19480 PF07537 CamS sex pheromone cAM373 precursor JC776_19495 PF00266 Aminotransferase class-V JC776_19500 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JC776_19500 PF01842 ACT domain JC776_19500 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JC776_19510 PF01636 Phosphotransferase enzyme family JC776_19515 PF13439 Glycosyltransferase Family 4 JC776_19515 PF00534 Glycosyl transferases group 1 JC776_19535 PF13439 Glycosyltransferase Family 4 JC776_19535 PF00534 Glycosyl transferases group 1 JC776_19540 PF01370 NAD dependent epimerase/dehydratase family JC776_19545 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain JC776_19545 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain JC776_19545 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain JC776_19550 PF00483 Nucleotidyl transferase JC776_19560 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JC776_19575 PF07670 Nucleoside recognition JC776_19585 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JC776_19585 PF08028 Acyl-CoA dehydrogenase, C-terminal domain JC776_19585 PF02770 Acyl-CoA dehydrogenase, middle domain JC776_19590 PF03932 CutC family JC776_19595 PF10502 Signal peptidase, peptidase S26 JC776_19600 PF01614 Bacterial transcriptional regulator JC776_19600 PF09339 IclR helix-turn-helix domain JC776_19605 PF02682 Carboxyltransferase domain, subdomain C and D JC776_19610 PF02626 Carboxyltransferase domain, subdomain A and B JC776_19615 PF03746 LamB/YcsF family JC776_19630 PF01470 Pyroglutamyl peptidase JC776_19635 PF02146 Sir2 family JC776_19640 PF01569 PAP2 superfamily JC776_19650 PF00324 Amino acid permease JC776_19660 PF01925 Sulfite exporter TauE/SafE JC776_19675 PF00149 Calcineurin-like phosphoesterase JC776_19685 PF00392 Bacterial regulatory proteins, gntR family JC776_19685 PF00155 Aminotransferase class I and II JC776_19690 PF00892 EamA-like transporter family JC776_19695 PF02423 Ornithine cyclodeaminase/mu-crystallin family JC776_19700 PF07690 Major Facilitator Superfamily JC776_19700 PF00083 Sugar (and other) transporter JC776_19705 PF00583 Acetyltransferase (GNAT) family JC776_19710 PF16363 GDP-mannose 4,6 dehydratase JC776_19720 PF00293 NUDIX domain JC776_19725 PF13170 Protein of unknown function (DUF4003) JC776_19745 PF13302 Acetyltransferase (GNAT) domain JC776_19760 PF03992 Antibiotic biosynthesis monooxygenase JC776_19770 PF09706 CRISPR-associated protein (Cas_CXXC_CXXC) JC776_19785 PF18019 HD domain JC776_19785 PF00270 DEAD/DEAH box helicase JC776_19785 PF18395 Cas3 C-terminal domain JC776_19800 PF09827 CRISPR associated protein Cas2 JC776_19815 PF00291 Pyridoxal-phosphate dependent enzyme JC776_19830 PF00793 DAHP synthetase I family JC776_19830 PF01817 Chorismate mutase type II JC776_19835 PF00005 ABC transporter JC776_19835 PF12848 ABC transporter JC776_19840 PF00884 Sulfatase JC776_19845 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JC776_19850 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JC776_19855 PF03611 PTS system sugar-specific permease component JC776_19860 PF01522 Polysaccharide deacetylase JC776_19870 PF00583 Acetyltransferase (GNAT) family JC776_19870 PF13508 Acetyltransferase (GNAT) domain JC776_19880 PF01385 Probable transposase JC776_19880 PF07282 Putative transposase DNA-binding domain JC776_19880 PF12323 Helix-turn-helix domain JC776_19885 PF02522 Aminoglycoside 3-N-acetyltransferase JC776_19895 PF00005 ABC transporter JC776_19900 PF09084 NMT1/THI5 like JC776_19905 PF00528 Binding-protein-dependent transport system inner membrane component JC776_19910 PF00296 Luciferase-like monooxygenase JC776_19920 PF01594 AI-2E family transporter JC776_19945 PF00753 Metallo-beta-lactamase superfamily JC776_19945 PF16123 Hydroxyacylglutathione hydrolase C-terminus JC776_19950 PF13538 UvrD-like helicase C-terminal domain JC776_19955 PF03630 Fumble JC776_19965 PF00155 Aminotransferase class I and II JC776_19995 PF12323 Helix-turn-helix domain JC776_19995 PF01385 Probable transposase JC776_19995 PF07282 Putative transposase DNA-binding domain JC776_20000 PF04226 Transglycosylase associated protein JC776_20020 PF04740 LXG domain of WXG superfamily JC776_20105 PF14411 A nuclease of the HNH/ENDO VII superfamily with conserved LHH JC776_20105 PF04740 LXG domain of WXG superfamily JC776_20125 PF00144 Beta-lactamase JC776_20145 PF02645 Uncharacterised protein, DegV family COG1307 JC776_20225 PF13378 Enolase C-terminal domain-like JC776_20225 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain JC776_20230 PF00877 NlpC/P60 family JC776_20230 PF18348 Bacterial dipeptidyl-peptidase Sh3 domain JC776_20235 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JC776_20255 PF08876 Domain of unknown function (DUF1836) JC776_20270 PF00107 Zinc-binding dehydrogenase JC776_20270 PF08240 Alcohol dehydrogenase GroES-like domain JC776_20280 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading JC776_20280 PF18416 N-acetylglucosamine binding protein domain 2 JC776_20290 PF01368 DHH family JC776_20290 PF02833 DHHA2 domain JC776_20320 PF00270 DEAD/DEAH box helicase JC776_20320 PF00271 Helicase conserved C-terminal domain JC776_20320 PF16124 RecQ zinc-binding JC776_20320 PF00570 HRDC domain JC776_20320 PF09382 RQC domain JC776_20355 PF13673 Acetyltransferase (GNAT) domain JC776_20375 PF00574 Clp protease JC776_20380 PF04069 Substrate binding domain of ABC-type glycine betaine transport system JC776_20385 PF00571 CBS domain JC776_20385 PF00005 ABC transporter JC776_20390 PF00528 Binding-protein-dependent transport system inner membrane component JC776_20395 PF01022 Bacterial regulatory protein, arsR family JC776_20400 PF00106 short chain dehydrogenase JC776_20410 PF00266 Aminotransferase class-V JC776_20415 PF04199 Putative cyclase JC776_20420 PF03301 Tryptophan 2,3-dioxygenase JC776_20440 PF07486 Cell Wall Hydrolase JC776_20440 PF01471 Putative peptidoglycan binding domain JC776_20445 PF03413 Peptidase propeptide and YPEB domain JC776_20445 PF14620 YpeB sporulation JC776_20450 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) JC776_20460 PF00474 Sodium:solute symporter family JC776_20465 PF03070 TENA/THI-4/PQQC family JC776_20480 PF00491 Arginase family JC776_20485 PF01979 Amidohydrolase family JC776_20490 PF17391 Urocanase N-terminal domain JC776_20490 PF17392 Urocanase C-terminal domain JC776_20490 PF01175 Urocanase Rossmann-like domain JC776_20495 PF00221 Aromatic amino acid lyase JC776_20500 PF09021 HutP JC776_20510 PF11084 Protein of unknown function (DUF2621) JC776_20515 PF07301 Protein of unknown function (DUF1453) JC776_20520 PF02683 Cytochrome C biogenesis protein transmembrane region JC776_20535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JC776_20535 PF03466 LysR substrate binding domain JC776_20540 PF03788 LrgA family JC776_20545 PF04172 LrgB-like family JC776_20550 PF01546 Peptidase family M20/M25/M40 JC776_20560 PF00324 Amino acid permease JC776_20570 PF01925 Sulfite exporter TauE/SafE JC776_20580 PF01510 N-acetylmuramoyl-L-alanine amidase JC776_20580 PF01471 Putative peptidoglycan binding domain JC776_20595 PF00005 ABC transporter JC776_20595 PF00664 ABC transporter transmembrane region JC776_20600 PF00664 ABC transporter transmembrane region JC776_20600 PF00005 ABC transporter JC776_20605 PF03672 Uncharacterised protein family (UPF0154) JC776_20610 PF10747 Sporulation inhibitor of replication protein SirA JC776_20615 PF02779 Transketolase, pyrimidine binding domain JC776_20615 PF02780 Transketolase, C-terminal domain JC776_20615 PF00456 Transketolase, thiamine diphosphate binding domain JC776_20620 PF00528 Binding-protein-dependent transport system inner membrane component JC776_20625 PF00528 Binding-protein-dependent transport system inner membrane component JC776_20630 PF00005 ABC transporter JC776_20640 PF00149 Calcineurin-like phosphoesterase JC776_20640 PF02872 5'-nucleotidase, C-terminal domain JC776_20645 PF05979 Bacterial protein of unknown function (DUF896) JC776_20650 PF00239 Resolvase, N terminal domain JC776_20655 PF01726 LexA DNA binding domain JC776_20655 PF00717 Peptidase S24-like JC776_20670 PF03551 Transcriptional regulator PadR-like family JC776_20710 PF00872 Transposase, Mutator family JC776_20715 PF00872 Transposase, Mutator family JC776_20720 PF00872 Transposase, Mutator family JC776_20735 PF11954 Domain of unknown function (DUF3471) JC776_20735 PF00144 Beta-lactamase JC776_20750 PF01022 Bacterial regulatory protein, arsR family JC776_20770 PF00155 Aminotransferase class I and II JC776_20770 PF00392 Bacterial regulatory proteins, gntR family JC776_20785 PF01925 Sulfite exporter TauE/SafE JC776_20900 PF03837 RecT family JC776_20910 PF09588 YqaJ-like viral recombinase domain JC776_20960 PF00589 Phage integrase family JC776_20960 PF14659 Phage integrase, N-terminal SAM-like domain JC776_20965 PF03951 Glutamine synthetase, beta-Grasp domain JC776_20965 PF00120 Glutamine synthetase, catalytic domain JC776_20970 PF13411 MerR HTH family regulatory protein JC776_20975 PF06838 Methionine gamma-lyase JC776_20980 PF01926 50S ribosome-binding GTPase JC776_20980 PF13167 GTP-binding GTPase N-terminal JC776_20980 PF16360 GTP-binding GTPase Middle Region JC776_20985 PF03458 UPF0126 domain JC776_20995 PF17866 AAA lid domain JC776_20995 PF00004 ATPase family associated with various cellular activities (AAA) JC776_21010 PF17209 Hfq protein JC776_21025 PF06725 3D domain JC776_21025 PF01476 LysM domain JC776_21030 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JC776_21030 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JC776_21035 PF00294 pfkB family carbohydrate kinase JC776_21040 PF08220 DeoR-like helix-turn-helix domain JC776_21040 PF00455 DeoR C terminal sensor domain JC776_21045 PF04238 Protein of unknown function (DUF420) JC776_21065 PF01226 Formate/nitrite transporter JC776_21070 PF00216 Bacterial DNA-binding protein JC776_21075 PF02583 Metal-sensitive transcriptional repressor JC776_21080 PF00756 Putative esterase JC776_21085 PF00005 ABC transporter JC776_21090 PF01032 FecCD transport family JC776_21095 PF01032 FecCD transport family JC776_21100 PF01497 Periplasmic binding protein JC776_21105 PF10282 Lactonase, 7-bladed beta-propeller JC776_21110 PF00665 Integrase core domain JC776_21110 PF13936 Helix-turn-helix domain JC776_21115 PF07687 Peptidase dimerisation domain JC776_21115 PF01546 Peptidase family M20/M25/M40 JC776_21125 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JC776_21135 PF00324 Amino acid permease JC776_21145 PF01119 DNA mismatch repair protein, C-terminal domain JC776_21145 PF08676 MutL C terminal dimerisation domain JC776_21160 PF14040 Deoxyribonuclease NucA/NucB JC776_21175 PF00239 Resolvase, N terminal domain JC776_21175 PF02796 Helix-turn-helix domain of resolvase JC776_21190 PF00226 DnaJ domain JC776_21190 PF01556 DnaJ C terminal domain JC776_21190 PF00684 DnaJ central domain JC776_21225 PF17854 FtsK alpha domain JC776_21225 PF09397 Ftsk gamma domain JC776_21225 PF01580 FtsK/SpoIIIE family JC776_21260 PF00989 PAS fold JC776_21260 PF00512 His Kinase A (phospho-acceptor) domain JC776_21260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC776_21265 PF00072 Response regulator receiver domain JC776_21265 PF00196 Bacterial regulatory proteins, luxR family JC776_21270 PF01381 Helix-turn-helix JC776_21325 PF00437 Type II/IV secretion system protein JC776_21445 PF04002 RadC-like JAB domain JC776_21455 PF00145 C-5 cytosine-specific DNA methylase JC776_21465 PF01555 DNA methylase JC776_21470 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JC776_21480 PF18801 response regulator aspartate phosphatase H, N terminal JC776_21480 PF13176 Tetratricopeptide repeat JC776_21490 PF01022 Bacterial regulatory protein, arsR family JC776_21515 PF13614 AAA domain JC776_21520 PF08708 Primase C terminal 1 (PriCT-1) JC776_21540 PF17362 Family of unknown function JC776_21600 PF00437 Type II/IV secretion system protein JC776_21625 PF04956 TrbC/VIRB2 family JC776_21635 PF12696 TraM recognition site of TraD and TraG JC776_21675 PF00877 NlpC/P60 family JC776_21685 PF17632 Family of unknown function (DUF5513) JC776_21715 PF17633 Family of unknown function (DUF5514) JC776_21720 PF17630 Family of unknown function (DUF5511) JC776_21725 PF18840 Large polyvalent protein associated domain 25 JC776_21740 PF13154 Protein of unknown function (DUF3991) JC776_21745 PF13958 Toxin ToxN, type III toxin-antitoxin system JC776_21760 PF01751 Toprim domain JC776_21760 PF01131 DNA topoisomerase JC776_21760 PF08272 Topoisomerase I zinc-ribbon-like JC776_21760 PF01396 Topoisomerase DNA binding C4 zinc finger JC776_21770 PF00665 Integrase core domain JC776_21775 PF13401 AAA domain JC776_21775 PF11426 Tn7 transposition regulator TnsC JC776_21810 PF00582 Universal stress protein family JC776_21815 PF03601 Conserved hypothetical protein 698 JC776_21820 PF03466 LysR substrate binding domain JC776_21820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JC776_21830 PF01131 DNA topoisomerase JC776_21830 PF01751 Toprim domain JC776_21835 PF02517 CPBP intramembrane metalloprotease JC776_21905 PF02899 Phage integrase, N-terminal SAM-like domain JC776_21905 PF00589 Phage integrase family JC776_21910 PF02796 Helix-turn-helix domain of resolvase JC776_21910 PF00239 Resolvase, N terminal domain JC776_21925 PF13152 Protein of unknown function (DUF3967) JC776_21925 PF13411 MerR HTH family regulatory protein