locus-tag	class	description
JC773_00075	COG3728	DNA packaging
JC773_00080	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
JC773_00165	COG3723	Recombinational DNA repair protein, rece pathway
JC773_00170	COG5377	YqaJ viral recombinase family
JC773_00245	COG1078	dGTPase activity
JC773_00260	COG0646	methionine synthase
JC773_00260	COG1410	methionine synthase
JC773_00265	COG0646	methionine synthase
JC773_00265	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
JC773_00270	COG0626	cystathionine gamma-synthase activity
JC773_00275	COG0626	cystathionine gamma-synthase activity
JC773_00290	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
JC773_00300	COG1940	carbohydrate kinase activity
JC773_00305	COG4483	Protein conserved in bacteria
JC773_00310	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
JC773_00315	COG0267	Belongs to the bacterial ribosomal protein bL33 family
JC773_00320	COG1208	COG1208 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis translation initiation factor 2B, gamma epsilon subunits eIF-2Bgamma eIF-2Bepsilon
JC773_00325	COG0704	Plays a role in the regulation of phosphate uptake
JC773_00335	COG0581	inorganic phosphate transmembrane transporter activity
JC773_00340	COG0573	inorganic phosphate transmembrane transporter activity
JC773_00345	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
JC773_00350	COG0768	penicillin binding
JC773_00355	COG0477	Major facilitator Superfamily
JC773_00360	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
JC773_00380	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
JC773_00385	COG0735	belongs to the Fur family
JC773_00390	COG1108	ABC-type Mn2 Zn2 transport systems permease components
JC773_00395	COG1121	(ABC) transporter
JC773_00400	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
JC773_00410	COG0648	Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin
JC773_00425	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
JC773_00430	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
JC773_00435	COG2384	SAM-dependent methyltransferase
JC773_00445	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
JC773_00450	COG0358	DNA primase activity
JC773_00455	COG1671	Belongs to the UPF0178 family
JC773_00460	COG1806	Bifunctional serine threonine kinase and phosphorylase involved in the regulation of the
JC773_00465	COG0517	IMP dehydrogenase activity
JC773_00470	COG1381	Involved in DNA repair and RecF pathway recombination
JC773_00480	COG1159	An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism
JC773_00490	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
JC773_00495	COG0319	Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA
JC773_00500	COG1480	7TM receptor with intracellular HD hydrolase
JC773_00505	COG1702	phosphate starvation-inducible protein PhoH
JC773_00520	COG1610	YqeY-like protein
JC773_00525	COG0828	Belongs to the bacterial ribosomal protein bS21 family
JC773_00530	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
JC773_00535	COG1385	rRNA (uridine-N3-)-methyltransferase activity
JC773_00540	COG2264	protein methyltransferase activity
JC773_00545	COG0484	heat shock protein binding
JC773_00550	COG0443	Heat shock 70 kDa protein
JC773_00555	COG0576	Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ
JC773_00560	COG1420	regulation of RNA biosynthetic process
JC773_00565	COG0635	Involved in the biosynthesis of porphyrin-containing compound
JC773_00570	COG1733	regulation of RNA biosynthetic process
JC773_00575	COG0693	protein deglycase activity
JC773_00580	COG0481	GTPase activity
JC773_00590	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
JC773_00595	COG0268	Binds directly to 16S ribosomal RNA
JC773_00600	COG1466	dna polymerase III delta subunit
JC773_00610	COG2333	competence protein COMEC
JC773_00610	COG0658	competence protein
JC773_00615	COG2131	deaminase
JC773_00620	COG1596	polysaccharide export
JC773_00620	COG1555	photosystem II stabilization
JC773_00625	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
JC773_00630	COG2226	methyltransferase
JC773_00635	COG0799	negative regulation of ribosome biogenesis
JC773_00640	COG1713	HD superfamily hydrolase involved in NAD metabolism
JC773_00645	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
JC773_00650	COG1534	Rna-binding protein
JC773_00655	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
JC773_00660	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
JC773_00665	COG2179	HAD superfamily (subfamily IIIA) phosphatase, TIGR01668
JC773_00675	COG0688	phosphatidylethanolamine metabolic process
JC773_00685	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
JC773_00700	COG4824	toxin secretion phage lysis holin
JC773_00760	COG0740	serine-type endopeptidase activity
JC773_00805	COG0582	viral genome integration into host DNA
JC773_00875	COG0305	Participates in initiation and elongation during chromosome replication
JC773_00940	COG0267	Belongs to the bacterial ribosomal protein bL33 family
JC773_00945	COG2357	RelA SpoT domain protein
JC773_00950	COG1785	Belongs to the alkaline phosphatase family
JC773_00955	COG0456	acetyltransferase
JC773_00960	COG2267	carboxylic ester hydrolase activity
JC773_00985	COG3186	Phenylalanine-4-hydroxylase
JC773_00990	COG2154	pterin-4-alpha-carbinolamine dehydratase
JC773_00995	COG2514	catechol 2,3-dioxygenase activity
JC773_01000	COG2259	Doxx family
JC773_01020	COG1609	Transcriptional regulator
JC773_01030	COG0626	cystathionine gamma-synthase activity
JC773_01035	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
JC773_01040	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
JC773_01045	COG2226	methyltransferase
JC773_01065	COG0768	penicillin binding
JC773_01075	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
JC773_01080	COG0572	uridine kinase
JC773_01085	COG0826	peptidase U32
JC773_01090	COG0826	peptidase U32
JC773_01095	COG4122	O-methyltransferase activity
JC773_01100	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
JC773_01110	COG0816	Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA
JC773_01115	COG4472	Bacterial protein of unknown function (DUF965)
JC773_01120	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
JC773_01125	COG0628	permease
JC773_01145	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
JC773_01155	COG0482	sulfurtransferase activity
JC773_01160	COG1104	cysteine desulfurase activity
JC773_01165	COG1959	2 iron, 2 sulfur cluster binding
JC773_01170	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
JC773_01190	COG2207	Transcriptional regulator
JC773_01200	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
JC773_01205	COG0173	Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp Asn)
JC773_01210	COG0124	histidyl-tRNA synthetase
JC773_01230	COG1490	D-aminoacyl-tRNA deacylase activity
JC773_01235	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
JC773_01240	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
JC773_01245	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
JC773_01245	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
JC773_01250	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
JC773_01255	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
JC773_01255	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
JC773_01265	COG2244	polysaccharide biosynthetic process
JC773_01285	COG1862	Preprotein translocase
JC773_01290	COG0343	queuine tRNA-ribosyltransferase activity
JC773_01295	COG0809	Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA)
JC773_01305	COG2255	four-way junction helicase activity
JC773_01310	COG0632	four-way junction helicase activity
JC773_01315	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
JC773_01335	COG0379	Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate
JC773_01340	COG0157	Belongs to the NadC ModD family
JC773_01345	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
JC773_01350	COG1104	cysteine desulfurase activity
JC773_01355	COG1827	regulation of RNA biosynthetic process
JC773_01360	COG2258	MOSC domain
JC773_01365	COG0077	Prephenate dehydratase
JC773_01370	COG0577	efflux transmembrane transporter activity
JC773_01375	COG0577	efflux transmembrane transporter activity
JC773_01380	COG1136	(ABC) transporter
JC773_01385	COG5002	protein histidine kinase activity
JC773_01390	COG0745	RESPONSE REGULATOR receiver
JC773_01400	COG3290	protein histidine kinase activity
JC773_01405	COG0211	Belongs to the bacterial ribosomal protein bL27 family
JC773_01410	COG2868	ribosomal protein
JC773_01415	COG0261	This protein binds to 23S rRNA in the presence of protein L20
JC773_01420	COG1530	ribonuclease E activity
JC773_01425	COG1994	Peptidase M50
JC773_01430	COG0739	heme binding
JC773_01435	COG2894	cell division
JC773_01440	COG0850	regulation of cytokinetic process
JC773_01450	COG1792	Involved in formation and maintenance of cell shape
JC773_01455	COG1077	Cell shape determining protein MreB Mrl
JC773_01475	COG0424	maF-like protein
JC773_01485	COG0285	dihydrofolate synthase activity
JC773_01505	COG1388	LysM domain
JC773_01505	COG1388	LysM domain
JC773_01510	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
JC773_01515	COG0113	porphobilinogen synthase activity
JC773_01520	COG1587	Uroporphyrinogen-III synthase
JC773_01525	COG0181	hydroxymethylbilane synthase activity
JC773_01530	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
JC773_01535	COG0373	Catalyzes the NADPH-dependent reduction of glutamyl- tRNA(Glu) to glutamate 1-semialdehyde (GSA)
JC773_01540	COG0218	Necessary for normal cell division and for the maintenance of normal septation
JC773_01550	COG1067	ATP-dependent peptidase activity
JC773_01550	COG0470	DNA polymerase III
JC773_01555	COG1219	ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP
JC773_01560	COG0544	peptidyl-prolyl cis-trans isomerase activity
JC773_01585	COG4221	oxidoreductase activity
JC773_01585	COG3321	synthase
JC773_01585	COG1028	Short-chain dehydrogenase reductase Sdr
JC773_01585	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
JC773_01600	COG2409	Drug exporters of the RND superfamily
JC773_01600	COG1033	growth of symbiont in host cell
JC773_01610	COG1309	transcriptional regulator
JC773_01630	COG0622	Phosphoesterase
JC773_01640	COG0689	Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
JC773_01645	COG5401	PFAM Sporulation and spore germination
JC773_01655	COG2197	response regulator
JC773_01690	COG2197	response regulator
JC773_01700	COG1959	2 iron, 2 sulfur cluster binding
JC773_01705	COG1668	transmembrane transport
JC773_01710	COG4152	abc transporter atp-binding protein
JC773_01715	COG1360	Flagellar Motor Protein
JC773_01720	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
JC773_01725	COG1876	peptidase activity
JC773_01735	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
JC773_01740	COG1053	succinate dehydrogenase
JC773_01745	COG2009	succinate dehydrogenase
JC773_01750	COG1719	4-vinyl reductase, 4VR
JC773_01765	COG3118	belongs to the thioredoxin family
JC773_01770	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
JC773_01775	COG2086	electron transfer activity
JC773_01780	COG1024	Enoyl-CoA hydratase
JC773_01785	COG1309	transcriptional regulator
JC773_01790	COG0318	PFAM AMP-dependent synthetase and ligase
JC773_01800	COG2318	DinB family
JC773_01820	COG1131	(ABC) transporter
JC773_01825	COG2205	protein histidine kinase activity
JC773_01830	COG0745	RESPONSE REGULATOR receiver
JC773_01840	COG4895	conserved protein (DUF2196)
JC773_01845	COG1092	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA
JC773_01850	COG1114	Component of the transport system for branched-chain amino acids
JC773_01855	COG1187	pseudouridine synthase activity
JC773_01860	COG1193	negative regulation of DNA recombination
JC773_01865	COG1796	DNA polymerase
JC773_01865	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
JC773_01870	COG1286	toxin biosynthetic process
JC773_01875	COG3027	Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division
JC773_01880	COG1039	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
JC773_01890	COG0017	Asparaginyl-tRNA synthetase
JC773_01900	COG0016	Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily
JC773_01905	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
JC773_01915	COG1418	mRNA catabolic process
JC773_01925	COG2814	Major facilitator Superfamily
JC773_01930	COG1566	PFAM secretion protein HlyD family protein
JC773_01935	COG1309	transcriptional regulator
JC773_01940	COG1363	Peptidase, m42
JC773_01950	COG0292	Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit
JC773_01955	COG0291	Belongs to the bacterial ribosomal protein bL35 family
JC773_01965	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
JC773_01975	COG1484	DNA-dependent DNA replication
JC773_01980	COG3611	Membrane attachment protein
JC773_01985	COG1327	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes
JC773_01990	COG1586	Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine
JC773_01995	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
JC773_02005	COG1971	Probably functions as a manganese efflux pump
JC773_02015	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
JC773_02015	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
JC773_02020	COG5002	protein histidine kinase activity
JC773_02025	COG0745	RESPONSE REGULATOR receiver
JC773_02040	COG0039	L-malate dehydrogenase activity
JC773_02045	COG0538	isocitrate dehydrogenase activity
JC773_02050	COG0372	Belongs to the citrate synthase family
JC773_02055	COG2707	UPF0756 membrane protein
JC773_02060	COG0628	permease
JC773_02065	COG3030	protein affecting phage T7 exclusion by the F plasmid
JC773_02075	COG0205	6-phosphofructokinase activity
JC773_02080	COG0825	malonyl-CoA metabolic process
JC773_02085	COG0777	Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl- CoA
JC773_02090	COG1725	Transcriptional regulator
JC773_02095	COG0281	malic enzyme
JC773_02100	COG0587	DNA-directed DNA polymerase activity
JC773_02115	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
JC773_02125	COG4109	DRTGG domain
JC773_02130	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
JC773_02135	COG0006	proline dipeptidase activity
JC773_02160	COG1028	Short-chain dehydrogenase reductase Sdr
JC773_02165	COG0589	response to stress
JC773_02185	COG0165	Argininosuccinate lyase
JC773_02190	COG0137	argininosuccinate synthase activity
JC773_02200	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
JC773_02210	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
JC773_02215	COG0827	DNA restriction-modification system
JC773_02220	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
JC773_02225	COG3874	Sporulation protein YtfJ
JC773_02240	COG1574	metal-dependent hydrolase with the TIM-barrel fold
JC773_02245	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
JC773_02255	COG0301	tRNA thio-modification
JC773_02260	COG1104	cysteine desulfurase activity
JC773_02265	COG4477	modulates the frequency and position of FtsZ ring formation. Inhibits FtsZ ring formation at polar sites. Interacts either with FtsZ or with one of its binding partners to promote depolymerization
JC773_02270	COG0583	DNA-binding transcription factor activity
JC773_02275	COG0697	spore germination
JC773_02280	COG1309	transcriptional regulator
JC773_02285	COG1956	GAF domain-containing protein
JC773_02290	COG0626	cystathionine gamma-synthase activity
JC773_02295	COG0522	One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit
JC773_02325	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
JC773_02330	COG0454	-acetyltransferase
JC773_02335	COG0517	IMP dehydrogenase activity
JC773_02340	COG0123	including yeast histone deacetylase and acetoin utilization protein
JC773_02345	COG1970	mechanosensitive ion channel activity
JC773_02355	COG1609	Transcriptional regulator
JC773_02360	COG1605	Chorismate mutase
JC773_02360	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
JC773_02365	COG3118	belongs to the thioredoxin family
JC773_02375	COG2309	aminopeptidase activity
JC773_02390	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
JC773_02400	COG1674	ftsk spoiiie
JC773_02410	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
JC773_02415	COG4848	Belongs to the UPF0354 family
JC773_02420	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
JC773_02425	COG1986	Phosphatase that hydrolyzes non-canonical purine nucleotides such as XTP and ITP to their respective diphosphate derivatives. Probably excludes non-canonical purines from DNA precursor pool, thus preventing their incorporation into DNA and avoiding chromosomal lesions
JC773_02430	COG0675	Transposase, IS605 OrfB family
JC773_02445	COG1363	Peptidase, m42
JC773_02455	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
JC773_02460	COG0220	tRNA (guanine-N7-)-methyltransferase activity
JC773_02470	COG0510	thiamine kinase activity
JC773_02475	COG1523	belongs to the glycosyl hydrolase 13 family
JC773_02485	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
JC773_02490	COG1349	DNA-binding transcription factor activity
JC773_02495	COG1187	pseudouridine synthase activity
JC773_02500	COG2244	polysaccharide biosynthetic process
JC773_02505	COG2081	HI0933 family
JC773_02510	COG2814	Major facilitator Superfamily
JC773_02520	COG3832	glyoxalase III activity
JC773_02540	COG0463	Glycosyl transferase, family 2
JC773_02600	COG1329	Transcriptional regulator
JC773_02610	COG2223	nitrite transmembrane transporter activity
JC773_02620	COG0314	molybdopterin synthase activity
JC773_02625	COG1763	Mo-molybdopterin cofactor biosynthetic process
JC773_02630	COG0303	'Molybdopterin
JC773_02635	COG0315	cyclic pyranopterin monophosphate synthase activity
JC773_02640	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
JC773_02645	COG2896	Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate
JC773_02650	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
JC773_02655	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
JC773_02660	COG1140	nitrate reductase beta subunit
JC773_02665	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
JC773_02670	COG2181	nitrate reductase activity
JC773_02685	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
JC773_02695	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
JC773_02730	COG0495	leucyl-tRNA aminoacylation
JC773_02735	COG2814	Major facilitator Superfamily
JC773_02745	COG1136	(ABC) transporter
JC773_02750	COG0346	lactoylglutathione lyase activity
JC773_02765	COG1242	4 iron, 4 sulfur cluster binding
JC773_02770	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
JC773_02775	COG1121	(ABC) transporter
JC773_02785	COG1794	racemase activity, acting on amino acids and derivatives
JC773_02795	COG2378	regulation of single-species biofilm formation
JC773_02805	COG2267	carboxylic ester hydrolase activity
JC773_02810	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
JC773_02815	COG0746	molybdenum cofactor guanylyltransferase activity
JC773_02840	COG0192	Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme
JC773_02845	COG1866	Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA
JC773_02895	COG0800	Aldolase
JC773_02900	COG2610	gluconate transmembrane transporter activity
JC773_02905	COG1312	Catalyzes the dehydration of D-mannonate
JC773_02910	COG0246	Mannitol dehydrogenase
JC773_02915	COG1414	Transcriptional regulator
JC773_02920	COG3409	Peptidoglycan-binding domain 1 protein
JC773_02920	COG5632	N-Acetylmuramoyl-L-alanine amidase
JC773_02930	COG1368	sulfuric ester hydrolase activity
JC773_02945	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
JC773_02950	COG1116	anion transmembrane transporter activity
JC773_02955	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
JC773_02970	COG0494	nUDIX hydrolase
JC773_02980	COG1854	S-ribosylhomocysteine lyase activity
JC773_02985	COG0759	Could be involved in insertion of integral membrane proteins into the membrane
JC773_02990	COG0288	reversible hydration of carbon dioxide
JC773_02995	COG1271	oxidase subunit
JC773_03000	COG1294	oxidase, subunit
JC773_03030	COG1842	Phage shock protein A
JC773_03070	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
JC773_03075	COG1597	lipid kinase activity
JC773_03080	COG1136	(ABC) transporter
JC773_03090	COG0745	RESPONSE REGULATOR receiver
JC773_03095	COG2205	protein histidine kinase activity
JC773_03100	COG0577	efflux transmembrane transporter activity
JC773_03105	COG1136	(ABC) transporter
JC773_03120	COG4948	Mandelate Racemase Muconate Lactonizing
JC773_03125	COG0318	PFAM AMP-dependent synthetase and ligase
JC773_03130	COG0447	Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4- dihydroxy-2-naphthoyl-CoA (DHNA-CoA)
JC773_03135	COG0596	Alpha beta hydrolase
JC773_03140	COG1165	Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC)
JC773_03145	COG1169	isochorismate synthase
JC773_03150	COG1575	Belongs to the MenA family. Type 1 subfamily
JC773_03155	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
JC773_03175	COG0058	SHG alpha-glucan phosphorylase activity
JC773_03180	COG0297	glycogen (starch) synthase activity
JC773_03185	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
JC773_03190	COG0448	Catalyzes the synthesis of ADP-glucose, a sugar donor used in elongation reactions on alpha-glucans
JC773_03195	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
JC773_03295	COG0544	peptidyl-prolyl cis-trans isomerase activity
JC773_03330	COG1285	pathogenesis
JC773_03335	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
JC773_03345	COG0166	Belongs to the GPI family
JC773_03350	COG2155	Conserved Protein
JC773_03355	COG1098	S1 RNA binding domain
JC773_03360	COG0436	Aminotransferase
JC773_03365	COG1522	sequence-specific DNA binding
JC773_03370	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
JC773_03385	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
JC773_03390	COG2032	superoxide dismutase activity
JC773_03410	COG5018	Exonuclease
JC773_03415	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
JC773_03435	COG2050	protein possibly involved in aromatic compounds catabolism
JC773_03445	COG1268	BioY protein
JC773_03450	COG1210	Utp--glucose-1-phosphate uridylyltransferase
JC773_03455	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
JC773_03465	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
JC773_03475	COG3584	3D domain protein
JC773_03495	COG1252	NADH dehydrogenase
JC773_03500	COG0492	ferredoxin-NADP+ reductase activity
JC773_03515	COG1683	Conserved Protein
JC773_03525	COG0316	Belongs to the HesB IscA family
JC773_03530	COG0253	Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan
JC773_03535	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
JC773_03545	COG1252	NADH dehydrogenase
JC773_03550	COG2824	Alkylphosphonate utilization operon protein PhnA
JC773_03560	COG3655	Transcriptional regulator
JC773_03575	COG4837	Protein of unknown function (DUF1462)
JC773_03580	COG0694	Involved in iron-sulfur cluster biogenesis. Binds a 4Fe- 4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe S proteins. Could also act as a scaffold chaperone for damaged Fe S proteins
JC773_03585	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
JC773_03590	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
JC773_03595	COG0647	UMP catabolic process
JC773_03605	COG2445	Protein of unknown function DUF86
JC773_03610	COG1494	fructose-1,6-bisphosphatase
JC773_03620	COG4470	Protein conserved in bacteria
JC773_03630	COG0789	Transcriptional regulator
JC773_03635	COG4377	Putative membrane peptidase family (DUF2324)
JC773_03650	COG0320	Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives
JC773_03655	COG0739	heme binding
JC773_03665	COG3377	Domain of unknown function (DUF1805)
JC773_03670	COG0737	Belongs to the 5'-nucleotidase family
JC773_03690	COG0719	Fe-S assembly protein
JC773_03695	COG0822	iron-sulfur transferase activity
JC773_03700	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
JC773_03705	COG0719	Fe-S assembly protein
JC773_03710	COG0396	ATPase activity
JC773_03715	COG1464	Belongs to the NlpA lipoprotein family
JC773_03720	COG2011	ABC-type metal ion transport system permease component
JC773_03735	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
JC773_03740	COG1658	Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step
JC773_03745	COG0509	glycine decarboxylation via glycine cleavage system
JC773_03750	COG1393	Belongs to the ArsC family
JC773_03785	COG0675	Transposase, IS605 OrfB family
JC773_03795	COG1960	acyl-CoA dehydrogenase activity
JC773_03800	COG0183	Belongs to the thiolase family
JC773_03805	COG1024	Enoyl-CoA hydratase
JC773_03805	COG1250	3-hydroxyacyl-CoA dehydrogenase
JC773_03815	COG1686	Belongs to the peptidase S11 family
JC773_03835	COG0011	TIGRFAM Protein of
JC773_03840	COG0840	transmembrane signaling receptor activity
JC773_03860	COG0531	amino acid
JC773_03865	COG0706	membrane insertase activity
JC773_03875	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
JC773_03885	COG5002	protein histidine kinase activity
JC773_03890	COG0745	RESPONSE REGULATOR receiver
JC773_03905	COG1131	(ABC) transporter
JC773_03915	COG0586	Pfam SNARE associated Golgi protein
JC773_03925	COG1376	ErfK ybiS ycfS ynhG family protein
JC773_03930	COG0745	RESPONSE REGULATOR receiver
JC773_03935	COG5002	protein histidine kinase activity
JC773_03940	COG0840	transmembrane signaling receptor activity
JC773_03945	COG0840	transmembrane signaling receptor activity
JC773_03950	COG2151	metal-sulfur cluster biosynthetic enzyme
JC773_03955	COG3227	Zinc metalloprotease (Elastase)
JC773_03960	COG1741	Belongs to the pirin family
JC773_03975	COG0783	Belongs to the Dps family
JC773_03980	COG1611	Belongs to the LOG family
JC773_04000	COG0803	Belongs to the bacterial solute-binding protein 9 family
JC773_04005	COG1108	ABC-type Mn2 Zn2 transport systems permease components
JC773_04010	COG1121	(ABC) transporter
JC773_04030	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
JC773_04035	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
JC773_04040	COG1115	amino acid carrier protein
JC773_04045	COG2910	NAD(P)H-binding
JC773_04060	COG1252	NADH dehydrogenase
JC773_04075	COG1595	DNA-templated transcription, initiation
JC773_04085	COG0239	Important for reducing fluoride concentration in the cell, thus reducing its toxicity
JC773_04100	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
JC773_04105	COG1917	Cupin 2, conserved barrel domain protein
JC773_04105	COG4977	sequence-specific DNA binding
JC773_04115	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
JC773_04135	COG0697	spore germination
JC773_04150	COG0691	Required for rescue of stalled ribosomes mediated by trans-translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene
JC773_04155	COG0557	exoribonuclease II activity
JC773_04160	COG1647	Serine aminopeptidase, S33
JC773_04165	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
JC773_04170	COG1346	cytolysis
JC773_04180	COG0148	phosphopyruvate hydratase activity
JC773_04185	COG0696	Catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate
JC773_04190	COG0149	triose-phosphate isomerase activity
JC773_04195	COG0126	phosphoglycerate kinase activity
JC773_04200	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
JC773_04215	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
JC773_04225	COG0457	Tetratricopeptide repeat
JC773_04260	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
JC773_04275	COG2323	membrane
JC773_04285	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
JC773_04290	COG1481	regulation of sporulation
JC773_04295	COG0391	Required for morphogenesis under gluconeogenic growth conditions
JC773_04300	COG1660	Displays ATPase and GTPase activities
JC773_04305	COG1051	belongs to the nudix hydrolase family
JC773_04315	COG0492	ferredoxin-NADP+ reductase activity
JC773_04320	COG0457	Tetratricopeptide repeat
JC773_04325	COG0110	maltose O-acetyltransferase activity
JC773_04335	COG0682	Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins
JC773_04340	COG1493	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
JC773_04345	COG1950	PFAM Membrane protein of
JC773_04355	COG0178	The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate
JC773_04370	COG0789	Transcriptional regulator
JC773_04390	COG0583	DNA-binding transcription factor activity
JC773_04405	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
JC773_04410	COG0793	Belongs to the peptidase S41A family
JC773_04410	COG3409	Peptidoglycan-binding domain 1 protein
JC773_04415	COG2177	Part of the ABC transporter FtsEX involved in
JC773_04420	COG2884	Cell division ATP-binding protein ftsE
JC773_04445	COG1278	Cold shock
JC773_04450	COG1040	competence protein
JC773_04455	COG4098	Superfamily II DNA RNA helicase required for DNA uptake (late competence protein)
JC773_04460	COG1388	LysM domain
JC773_04460	COG0791	NLP P60 protein
JC773_04465	COG1733	regulation of RNA biosynthetic process
JC773_04470	COG1307	EDD domain protein, DegV family
JC773_04475	COG1739	Uncharacterized protein family UPF0029
JC773_04480	COG1316	TRANSCRIPTIONal
JC773_04500	COG0457	Tetratricopeptide repeat
JC773_04530	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
JC773_04540	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
JC773_04550	COG3933	PFAM sigma-54 factor interaction domain-containing protein
JC773_04550	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
JC773_04565	COG1486	melibiose metabolic process
JC773_04570	COG1447	Phosphotransferase system cellobiose-specific component IIA
JC773_04585	COG1447	Phosphotransferase system cellobiose-specific component IIA
JC773_04590	COG1301	dicarboxylic acid transport
JC773_04595	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
JC773_04600	COG1271	oxidase subunit
JC773_04605	COG1294	oxidase, subunit
JC773_04610	COG0422	Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction
JC773_04615	COG1620	l-lactate permease
JC773_04620	COG2389	metal-binding protein
JC773_04630	COG1368	sulfuric ester hydrolase activity
JC773_04640	COG0791	NLP P60 protein
JC773_04640	COG1388	LysM domain
JC773_04645	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
JC773_04655	COG1215	transferase activity, transferring glycosyl groups
JC773_04660	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
JC773_04665	COG1388	LysM domain
JC773_04665	COG3584	3D domain protein
JC773_04680	COG4715	Zinc finger, swim domain protein
JC773_04685	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
JC773_04725	COG0577	efflux transmembrane transporter activity
JC773_04730	COG1136	(ABC) transporter
JC773_04765	COG5002	protein histidine kinase activity
JC773_04765	COG3850	Histidine kinase
JC773_04770	COG0745	RESPONSE REGULATOR receiver
JC773_04775	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
JC773_04785	COG0764	3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
JC773_04790	COG1210	Utp--glucose-1-phosphate uridylyltransferase
JC773_04795	COG1134	teichoic acid transport
JC773_04800	COG1682	transport, permease protein
JC773_04805	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
JC773_04815	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
JC773_04820	COG1887	Glycosyl glycerophosphate transferases involved in teichoic acid biosynthesis TagF TagB EpsJ RodC
JC773_04825	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
JC773_04835	COG1609	Transcriptional regulator
JC773_04845	COG0739	heme binding
JC773_04860	COG3279	Response regulator of the LytR AlgR family
JC773_04865	COG2385	sporulation resulting in formation of a cellular spore
JC773_04880	COG4836	Membrane
JC773_04885	COG1007	ATP synthesis coupled electron transport
JC773_04890	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
JC773_04895	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
JC773_04900	COG0713	ATP synthesis coupled electron transport
JC773_04905	COG0839	Belongs to the complex I subunit 6 family
JC773_04915	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
JC773_04920	COG0649	NAD binding
JC773_04925	COG0852	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
JC773_04930	COG0377	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
JC773_04935	COG0838	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
JC773_04940	COG3300	MHYT domain
JC773_04940	COG5001	Diguanylate cyclase
JC773_04945	COG5001	Diguanylate cyclase
JC773_04945	COG3300	MHYT domain
JC773_04960	COG0355	proton-transporting ATP synthase activity, rotational mechanism
JC773_04965	COG0055	Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits
JC773_04970	COG0224	Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex
JC773_04975	COG0056	Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit
JC773_04980	COG0712	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
JC773_04985	COG0711	Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)
JC773_04990	COG0636	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
JC773_05015	COG0035	Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate
JC773_05020	COG0112	Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
JC773_05030	COG0698	ribose 5-phosphate isomerase
JC773_05050	COG2259	Doxx family
JC773_05055	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
JC773_05070	COG0009	L-threonylcarbamoyladenylate synthase
JC773_05085	COG2890	protein-(glutamine-N5) methyltransferase activity
JC773_05090	COG0216	Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA
JC773_05095	COG1435	thymidine kinase activity
JC773_05105	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
JC773_05110	COG1494	fructose-1,6-bisphosphatase
JC773_05130	COG4821	SIS domain
JC773_05135	COG0504	CTP synthase activity
JC773_05150	COG1960	acyl-CoA dehydrogenase activity
JC773_05155	COG1960	acyl-CoA dehydrogenase activity
JC773_05160	COG1250	3-hydroxyacyl-CoA dehydrogenase
JC773_05165	COG0183	Belongs to the thiolase family
JC773_05170	COG0247	lactate metabolic process
JC773_05170	COG2181	nitrate reductase activity
JC773_05175	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
JC773_05190	COG2197	response regulator
JC773_05195	COG4585	Histidine kinase
JC773_05200	COG0842	Transport permease protein
JC773_05205	COG1131	(ABC) transporter
JC773_05210	COG0024	Methionine aminopeptidase
JC773_05215	COG2234	aminopeptidase activity
JC773_05230	COG4506	Protein conserved in bacteria
JC773_05235	COG1619	proteins homologs of microcin C7 resistance protein MccF
JC773_05250	COG0010	Belongs to the arginase family
JC773_05255	COG0421	Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy- AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine
JC773_05260	COG2814	Major facilitator Superfamily
JC773_05265	COG0789	Transcriptional regulator
JC773_05270	COG0584	glycerophosphoryl diester phosphodiesterase
JC773_05275	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
JC773_05285	COG1994	Peptidase M50
JC773_05295	COG1078	dGTPase activity
JC773_05300	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
JC773_05305	COG1120	ATPase activity
JC773_05310	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JC773_05315	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JC773_05320	COG4844	belongs to the
JC773_05335	COG0280	phosphate acetyltransferase
JC773_05340	COG3253	May function as heme-dependent peroxidase
JC773_05350	COG3773	Cell wall hydrolase
JC773_05360	COG2363	Small membrane protein
JC773_05370	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
JC773_05375	COG2233	PERMEase
JC773_05380	COG0561	phosphatase activity
JC773_05385	COG2814	Major facilitator Superfamily
JC773_05390	COG0692	Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine
JC773_05395	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
JC773_05400	COG1131	(ABC) transporter
JC773_05405	COG2755	lipolytic protein G-D-S-L family
JC773_05410	COG0460	homoserine dehydrogenase
JC773_05415	COG1897	L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine
JC773_05420	COG2873	o-acetylhomoserine
JC773_05430	COG0351	phosphomethylpyrimidine kinase
JC773_05440	COG1966	Carbon starvation protein
JC773_05445	COG3279	Response regulator of the LytR AlgR family
JC773_05455	COG0477	Major facilitator Superfamily
JC773_05460	COG1922	lipopolysaccharide N-acetylmannosaminouronosyltransferase activity
JC773_05465	COG0438	transferase activity, transferring glycosyl groups
JC773_05480	COG0840	transmembrane signaling receptor activity
JC773_05505	COG1607	acyl-coa hydrolase
JC773_05510	COG1216	Glycosyl transferase, family 2
JC773_05525	COG0463	Glycosyl transferase, family 2
JC773_05540	COG0463	Glycosyl transferase, family 2
JC773_05545	COG0488	(ABC) transporter
JC773_05550	COG1309	transcriptional regulator
JC773_05555	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
JC773_05560	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
JC773_05560	COG0229	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
JC773_05565	COG0628	permease
JC773_05570	COG1346	cytolysis
JC773_05580	COG3279	Response regulator of the LytR AlgR family
JC773_05585	COG3275	phosphorelay sensor kinase activity
JC773_05590	COG2814	Major facilitator Superfamily
JC773_05595	COG4362	Belongs to the NOS family. Bacterial NOS oxygenase subfamily
JC773_05600	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
JC773_05610	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
JC773_05615	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
JC773_05615	COG3711	transcriptional antiterminator
JC773_05710	COG1576	Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA
JC773_05720	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
JC773_05725	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
JC773_05730	COG4853	Protein conserved in bacteria
JC773_05740	COG5002	protein histidine kinase activity
JC773_05745	COG0745	RESPONSE REGULATOR receiver
JC773_05770	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
JC773_05775	COG0305	Participates in initiation and elongation during chromosome replication
JC773_05780	COG0359	binds to the 23S rRNA
JC773_05785	COG3887	signaling protein consisting of a modified GGDEF domain and a DHH domain
JC773_05790	COG4241	membrane
JC773_05795	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
JC773_05805	COG0360	Binds together with S18 to 16S ribosomal RNA
JC773_05810	COG0012	GTP binding
JC773_05815	COG4481	Protein conserved in bacteria
JC773_05820	COG0668	transmembrane transport
JC773_05830	COG1475	DNA binding
JC773_05835	COG1192	Involved in chromosome partitioning
JC773_05840	COG1475	DNA binding
JC773_05845	COG0357	Ribosomal RNA small subunit methyltransferase G
JC773_05850	COG0445	tRNA wobble uridine modification
JC773_05855	COG0486	Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34
JC773_05860	COG1847	R3H domain protein
JC773_05865	COG0706	membrane insertase activity
JC773_05870	COG0594	ribonuclease P activity
JC773_05875	COG0230	Belongs to the bacterial ribosomal protein bL34 family
JC773_05880	COG0593	it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box) 5'-TTATC CA A CA A-3'. DnaA binds to ATP and to acidic phospholipids
JC773_05885	COG0592	DNA-directed DNA polymerase activity
JC773_05890	COG2501	S4 domain
JC773_05895	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
JC773_05900	COG0187	DNA topoisomerase II activity
JC773_05905	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
JC773_05940	COG0516	GMP reductase activity
JC773_05940	COG0517	IMP dehydrogenase activity
JC773_05950	COG1686	Belongs to the peptidase S11 family
JC773_05955	COG0214	Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5-phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively
JC773_05960	COG0311	Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS
JC773_05965	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
JC773_05980	COG1428	Deoxynucleoside kinase
JC773_05985	COG1428	Deoxynucleoside kinase
JC773_05990	COG1335	isochorismatase
JC773_05995	COG0590	tRNA wobble adenosine to inosine editing
JC773_06005	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
JC773_06010	COG0718	Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection
JC773_06015	COG0353	May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO
JC773_06060	COG1982	Orn Lys Arg decarboxylase major
JC773_06065	COG0125	Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis
JC773_06070	COG0470	DNA polymerase III
JC773_06075	COG1774	PSP1 C-terminal conserved region
JC773_06080	COG4467	Involved in initiation control of chromosome replication
JC773_06085	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
JC773_06095	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
JC773_06100	COG2002	toxin-antitoxin pair type II binding
JC773_06110	COG0084	hydrolase, TatD family'
JC773_06120	COG0030	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
JC773_06130	COG4466	Protein conserved in bacteria
JC773_06140	COG1947	Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol
JC773_06145	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
JC773_06150	COG0251	oxidation-reduction process
JC773_06155	COG2088	sporulation resulting in formation of a cellular spore
JC773_06160	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
JC773_06170	COG0193	aminoacyl-tRNA hydrolase activity
JC773_06180	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
JC773_06185	COG2002	toxin-antitoxin pair type II binding
JC773_06190	COG2244	polysaccharide biosynthetic process
JC773_06195	COG3956	TIGRFAM MazG family protein
JC773_06200	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
JC773_06220	COG1098	S1 RNA binding domain
JC773_06235	COG2208	phosphoserine phosphatase activity
JC773_06245	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
JC773_06250	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
JC773_06255	COG1521	Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis
JC773_06260	COG1281	Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress
JC773_06265	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
JC773_06270	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
JC773_06275	COG0512	Glutamine amidotransferase of anthranilate synthase
JC773_06280	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
JC773_06285	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
JC773_06290	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
JC773_06295	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
JC773_06300	COG1396	sequence-specific DNA binding
JC773_06305	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
JC773_06310	COG1190	Belongs to the class-II aminoacyl-tRNA synthetase family
JC773_06345	COG0544	peptidyl-prolyl cis-trans isomerase activity
JC773_06395	COG3880	PFAM UvrB UvrC protein
JC773_06400	COG3869	Catalyzes the specific phosphorylation of arginine residues in
JC773_06405	COG0542	response to heat
JC773_06410	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
JC773_06420	COG4956	integral membrane protein (PIN domain superfamily)
JC773_06425	COG1211	2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
JC773_06430	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
JC773_06435	COG0008	Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
JC773_06440	COG1045	serine acetyltransferase
JC773_06445	COG0215	cysteine-tRNA ligase activity
JC773_06455	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
JC773_06460	COG3688	RNA-binding protein containing a PIN domain
JC773_06470	COG0267	Belongs to the bacterial ribosomal protein bL33 family
JC773_06480	COG0250	Participates in transcription elongation, termination and antitermination
JC773_06485	COG0080	Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors
JC773_06490	COG0081	regulation of translation
JC773_06495	COG0244	Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors
JC773_06500	COG0222	ribosome binding
JC773_06505	COG2813	Specifically methylates the guanine in position
JC773_06515	COG0086	DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates
JC773_06520	COG1358	cellular component organization or biogenesis
JC773_06525	COG0048	Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit
JC773_06530	COG0049	tRNA binding
JC773_06535	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
JC773_06540	COG0050	This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis
JC773_06550	COG0087	One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit
JC773_06555	COG0088	Forms part of the polypeptide exit tunnel
JC773_06560	COG0089	rRNA binding
JC773_06565	COG0090	One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity
JC773_06570	COG0185	Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA
JC773_06575	COG0091	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome
JC773_06580	COG0092	Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation
JC773_06585	COG0197	Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs
JC773_06590	COG0255	Belongs to the universal ribosomal protein uL29 family
JC773_06595	COG0186	One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA
JC773_06600	COG0093	Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome
JC773_06605	COG0198	One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit
JC773_06610	COG0094	This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits
JC773_06620	COG0096	One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit
JC773_06630	COG0256	This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance
JC773_06635	COG0098	Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body
JC773_06640	COG1841	ribosomal large subunit assembly
JC773_06645	COG0200	Binds to the 23S rRNA
JC773_06650	COG0201	protein transport
JC773_06655	COG0563	adenylate kinase activity
JC773_06660	COG0024	Methionine aminopeptidase
JC773_06670	COG0257	Belongs to the bacterial ribosomal protein bL36 family
JC773_06675	COG0099	Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits
JC773_06680	COG0100	Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome
JC773_06685	COG0202	RNA polymerase activity
JC773_06705	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
JC773_06715	COG0102	This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly
JC773_06720	COG0103	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
JC773_06730	COG0860	N-Acetylmuramoyl-L-alanine amidase
JC773_06735	COG0489	protein tyrosine kinase activity
JC773_06745	COG2194	sulfuric ester hydrolase activity
JC773_06750	COG0726	polysaccharide deacetylase
JC773_06830	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
JC773_06840	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
JC773_06910	COG0457	Tetratricopeptide repeat
JC773_06930	COG1266	CAAX protease self-immunity
JC773_07000	COG3681	Belongs to the UPF0597 family
JC773_07005	COG3681	Belongs to the UPF0597 family
JC773_07035	COG2814	Major facilitator Superfamily
JC773_07045	COG0601	transmembrane transport
JC773_07050	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
JC773_07055	COG0444	Belongs to the ABC transporter superfamily
JC773_07060	COG4608	Belongs to the ABC transporter superfamily
JC773_07065	COG4166	transmembrane transport
JC773_07075	COG2207	Transcriptional regulator
JC773_07085	COG1309	transcriptional regulator
JC773_07095	COG0656	L-ascorbic acid biosynthetic process
JC773_07100	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
JC773_07110	COG4149	molybdate abc transporter
JC773_07115	COG0725	ABC transporter, periplasmic molybdate-binding protein
JC773_07120	COG1910	domain protein
JC773_07125	COG0204	Acyl-transferase
JC773_07130	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
JC773_07135	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
JC773_07135	COG1648	precorrin-2 dehydrogenase activity
JC773_07145	COG1587	Uroporphyrinogen-III synthase
JC773_07145	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
JC773_07150	COG2146	nitrite reductase [NAD(P)H] activity
JC773_07155	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
JC773_07180	COG4585	Histidine kinase
JC773_07185	COG2197	response regulator
JC773_07190	COG1131	(ABC) transporter
JC773_07195	COG0842	Transport permease protein
JC773_07195	COG1511	domain protein
JC773_07200	COG0842	Transport permease protein
JC773_07210	COG0747	negative chemotaxis
JC773_07215	COG0601	transmembrane transport
JC773_07220	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
JC773_07225	COG0444	Belongs to the ABC transporter superfamily
JC773_07230	COG4608	Belongs to the ABC transporter superfamily
JC773_07235	COG0561	phosphatase activity
JC773_07255	COG3185	4-Hydroxyphenylpyruvate dioxygenase
JC773_07260	COG0179	Fumarylacetoacetate (FAA) hydrolase
JC773_07270	COG2814	Major facilitator Superfamily
JC773_07275	COG1181	Belongs to the D-alanine--D-alanine ligase family
JC773_07280	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
JC773_07290	COG0457	Tetratricopeptide repeat
JC773_07290	COG0705	Rhomboid family
JC773_07295	COG0736	holo-[acyl-carrier-protein] synthase activity
JC773_07300	COG2834	Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane)
JC773_07310	COG0864	Transcriptional regulator
JC773_07315	COG2337	Toxic component of a toxin-antitoxin (TA) module
JC773_07320	COG2183	response to ionizing radiation
JC773_07330	COG3091	SprT-like family
JC773_07370	COG0544	peptidyl-prolyl cis-trans isomerase activity
JC773_07420	COG0802	atpase or kinase
JC773_07425	COG1214	PFAM Peptidase M22, glycoprotease
JC773_07430	COG0456	acetyltransferase
JC773_07440	COG0488	(ABC) transporter
JC773_07445	COG2344	Modulates transcription in response to changes in cellular NADH NAD( ) redox state
JC773_07455	COG1266	CAAX protease self-immunity
JC773_07460	COG0234	Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter
JC773_07465	COG0459	protein refolding
JC773_07470	COG0518	GMP synthase (glutamine-hydrolyzing) activity
JC773_07470	COG0519	Catalyzes the synthesis of GMP from XMP
JC773_07475	COG2252	PERMEase
JC773_07485	COG5002	protein histidine kinase activity
JC773_07550	COG2205	protein histidine kinase activity
JC773_07555	COG0745	RESPONSE REGULATOR receiver
JC773_07575	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
JC773_07580	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
JC773_07585	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
JC773_07590	COG0152	phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
JC773_07595	COG1828	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
JC773_07600	COG0047	phosphoribosylformylglycinamidine synthase activity
JC773_07605	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
JC773_07610	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
JC773_07615	COG0150	phosphoribosylformylglycinamidine cyclo-ligase activity
JC773_07620	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
JC773_07625	COG0138	bifunctional purine biosynthesis protein purh
JC773_07630	COG0151	Belongs to the GarS family
JC773_07640	COG0583	DNA-binding transcription factor activity
JC773_07660	COG1646	35 carbon atoms) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P), producing heptaprenylglyceryl phosphate (HepGP). This reaction is an ether-bond-formation step in the biosynthesis of archaea-type G1P-based membrane lipids found in Bacillales
JC773_07665	COG0210	DNA helicase
JC773_07670	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
JC773_07675	COG4851	CamS sex pheromone cAM373 precursor
JC773_07685	COG1012	belongs to the aldehyde dehydrogenase family
JC773_07690	COG1335	isochorismatase
JC773_07700	COG2011	ABC-type metal ion transport system permease component
JC773_07720	COG4682	membrane
JC773_07725	COG0721	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
JC773_07730	COG0154	amidase activity
JC773_07735	COG0064	Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA(Gln)
JC773_07740	COG1597	lipid kinase activity
JC773_07745	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
JC773_07750	COG0546	phosphoglycolate phosphatase activity
JC773_07755	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
JC773_07765	COG0531	amino acid
JC773_07770	COG1012	belongs to the aldehyde dehydrogenase family
JC773_07775	COG2076	Multidrug Resistance protein
JC773_07780	COG2309	aminopeptidase activity
JC773_07790	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
JC773_07795	COG2265	Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family
JC773_07800	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
JC773_07815	COG0450	alkyl hydroperoxide reductase
JC773_07840	COG0714	Associated with various cellular activities
JC773_07880	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JC773_07885	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JC773_07890	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
JC773_07895	COG0492	ferredoxin-NADP+ reductase activity
JC773_07905	COG0166	Belongs to the GPI family
JC773_07910	COG5002	protein histidine kinase activity
JC773_07940	COG3541	Predicted nucleotidyltransferase
JC773_07945	COG2814	Major facilitator Superfamily
JC773_07950	COG0723	plastoquinol--plastocyanin reductase activity
JC773_07950	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
JC773_07960	COG0765	amino acid transport
JC773_07965	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
JC773_07975	COG0840	transmembrane signaling receptor activity
JC773_07985	COG2235	arginine
JC773_08000	COG0549	Belongs to the carbamate kinase family
JC773_08005	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
JC773_08015	COG0366	Alpha amylase catalytic
JC773_08020	COG1263	PTS System
JC773_08020	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
JC773_08020	COG2190	(PTS) system
JC773_08040	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JC773_08045	COG4605	iron ion homeostasis
JC773_08050	COG4604	ABC transporter, ATP-binding protein
JC773_08055	COG4607	ABC-type enterochelin transport system periplasmic component
JC773_08060	COG2145	Catalyzes the phosphorylation of the hydroxyl group of 4-methyl-5-beta-hydroxyethylthiazole (THZ)
JC773_08065	COG0352	thiamine-phosphate diphosphorylase activity
JC773_08075	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
JC773_08095	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
JC773_08105	COG1116	anion transmembrane transporter activity
JC773_08135	COG2270	Major facilitator Superfamily
JC773_08160	COG2310	stress, protein
JC773_08165	COG2310	stress, protein
JC773_08170	COG2310	stress, protein
JC773_08175	COG0861	Integral membrane protein TerC family
JC773_08185	COG3853	Toxic anion resistance protein (TelA)
JC773_08195	COG4840	Belongs to the UPF0435 family
JC773_08200	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
JC773_08210	COG1295	ribonuclease BN
JC773_08215	COG2217	Heavy metal translocating P-type atpase
JC773_08220	COG0697	spore germination
JC773_08230	COG0681	Belongs to the peptidase S26 family
JC773_08240	COG0586	Pfam SNARE associated Golgi protein
JC773_08255	COG0387	Pfam Sodium calcium exchanger
JC773_08265	COG0535	radical SAM domain protein
JC773_08285	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
JC773_08310	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
JC773_08365	COG2066	Belongs to the glutaminase family
JC773_08370	COG1263	PTS System
JC773_08370	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
JC773_08375	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
JC773_08385	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
JC773_08385	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
JC773_08395	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
JC773_08400	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
JC773_08415	COG0402	S-adenosylhomocysteine deaminase activity
JC773_08420	COG2137	regulation of response to DNA damage stimulus
JC773_08445	COG1988	membrane-bound metal-dependent
JC773_08450	COG1194	a g-specific adenine glycosylase
JC773_08475	COG3557	Belongs to the UPF0374 family
JC773_08480	COG1132	(ABC) transporter
JC773_08485	COG4129	membrane
JC773_08490	COG0067	glutamate synthase
JC773_08490	COG0069	glutamate synthase activity
JC773_08490	COG0070	glutamate synthase
JC773_08495	COG0001	glutamate-1-semialdehyde 2,1-aminomutase activity
JC773_08500	COG4555	ABC transporter
JC773_08520	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
JC773_08525	COG0735	belongs to the Fur family
JC773_08625	COG0457	Tetratricopeptide repeat
JC773_08650	COG0217	transcriptional regulatory protein
JC773_08655	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
JC773_08660	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
JC773_08680	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
JC773_08685	COG2766	serine protein kinase
JC773_08690	COG2718	Belongs to the UPF0229 family
JC773_08705	COG1280	lysine exporter protein (LysE YggA)
JC773_08750	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
JC773_08760	COG1585	Membrane protein implicated in regulation of membrane protease activity
JC773_08765	COG2268	Band 7 protein
JC773_08800	COG4990	cell redox homeostasis
JC773_08810	COG3290	protein histidine kinase activity
JC773_08815	COG4565	transcriptional regulatory protein
JC773_08820	COG3493	citrate carrier protein
JC773_08825	COG0281	malic enzyme
JC773_08840	COG5002	protein histidine kinase activity
JC773_08845	COG0745	RESPONSE REGULATOR receiver
JC773_08850	COG1526	Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH
JC773_08855	COG3383	formate dehydrogenase (NAD+) activity
JC773_08860	COG2427	Protein of unknown function (DUF1641)
JC773_08870	COG0840	transmembrane signaling receptor activity
JC773_08880	COG0531	amino acid
JC773_08890	COG0640	Transcriptional regulator
JC773_08895	COG2217	Heavy metal translocating P-type atpase
JC773_08900	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
JC773_08920	COG3227	Zinc metalloprotease (Elastase)
JC773_08935	COG2217	Heavy metal translocating P-type atpase
JC773_08955	COG2720	vancomycin resistance protein
JC773_08960	COG1316	TRANSCRIPTIONal
JC773_08965	COG1253	flavin adenine dinucleotide binding
JC773_08970	COG1027	Aspartate ammonia-lyase
JC773_08975	COG1620	l-lactate permease
JC773_08990	COG3104	oligopeptide transport
JC773_08995	COG0156	8-amino-7-oxononanoate synthase activity
JC773_09000	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
JC773_09005	COG4548	von Willebrand factor, type A
JC773_09010	COG0714	Associated with various cellular activities
JC773_09015	COG0531	amino acid
JC773_09020	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
JC773_09025	COG1115	amino acid carrier protein
JC773_09030	COG1126	abc transporter atp-binding protein
JC773_09035	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
JC773_09040	COG0765	amino acid transport
JC773_09045	COG0765	amino acid transport
JC773_09050	COG0833	amino acid
JC773_09060	COG5002	protein histidine kinase activity
JC773_09065	COG0745	RESPONSE REGULATOR receiver
JC773_09075	COG0659	secondary active sulfate transmembrane transporter activity
JC773_09080	COG0589	response to stress
JC773_09090	COG0747	negative chemotaxis
JC773_09100	COG0601	transmembrane transport
JC773_09105	COG4608	Belongs to the ABC transporter superfamily
JC773_09115	COG2271	Major facilitator Superfamily
JC773_09120	COG1846	Transcriptional regulator
JC773_09125	COG0477	Major facilitator Superfamily
JC773_09130	COG1609	Transcriptional regulator
JC773_09135	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
JC773_09140	COG1869	D-ribose catabolic process
JC773_09150	COG1172	Belongs to the binding-protein-dependent transport system permease family
JC773_09155	COG1879	ABC-type sugar transport system periplasmic component
JC773_09160	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
JC773_09175	COG3568	Endonuclease Exonuclease Phosphatase
JC773_09205	COG3584	3D domain protein
JC773_09205	COG1388	LysM domain
JC773_09210	COG1476	TRANSCRIPTIONal
JC773_09245	COG1114	Component of the transport system for branched-chain amino acids
JC773_09255	COG1113	amino acid transport
JC773_09260	COG2153	protein acetylation
JC773_09270	COG0475	glutathione-regulated potassium exporter activity
JC773_09270	COG0569	domain protein
JC773_09285	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
JC773_09290	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
JC773_09295	COG0833	amino acid
JC773_09300	COG4990	cell redox homeostasis
JC773_09315	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
JC773_09320	COG0697	spore germination
JC773_09325	COG0531	amino acid
JC773_09340	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
JC773_09345	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
JC773_09350	COG1918	ferrous iron import across plasma membrane
JC773_09350	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
JC773_09355	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
JC773_09360	COG0573	inorganic phosphate transmembrane transporter activity
JC773_09365	COG0581	inorganic phosphate transmembrane transporter activity
JC773_09370	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
JC773_09410	COG0544	peptidyl-prolyl cis-trans isomerase activity
JC773_09490	COG2905	signal-transduction protein containing cAMP-binding and CBS domains
JC773_09520	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
JC773_09525	COG1116	anion transmembrane transporter activity
JC773_09530	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
JC773_09535	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
JC773_09540	COG0352	thiamine-phosphate diphosphorylase activity
JC773_09545	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
JC773_09550	COG2104	thiamine diphosphate biosynthetic process
JC773_09555	COG2022	thiamine diphosphate biosynthetic process
JC773_09560	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
JC773_09565	COG0351	phosphomethylpyrimidine kinase
JC773_09595	COG2216	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system
JC773_09600	COG2156	Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP- binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB KdpC ATP ternary complex
JC773_09605	COG2205	protein histidine kinase activity
JC773_09610	COG2814	Major facilitator Superfamily
JC773_09615	COG1846	Transcriptional regulator
JC773_09625	COG2252	PERMEase
JC773_09630	COG1028	Short-chain dehydrogenase reductase Sdr
JC773_09635	COG1376	ErfK ybiS ycfS ynhG family protein
JC773_09690	COG0778	Nitroreductase
JC773_09700	COG2719	SpoVR family
JC773_09710	COG1316	TRANSCRIPTIONal
JC773_09715	COG1283	sodium-dependent phosphate transmembrane transporter activity
JC773_09730	COG0577	efflux transmembrane transporter activity
JC773_09735	COG1136	(ABC) transporter
JC773_09750	COG1114	Component of the transport system for branched-chain amino acids
JC773_09755	COG3546	catalase activity
JC773_09810	COG0475	glutathione-regulated potassium exporter activity
JC773_09815	COG1737	Transcriptional regulator
JC773_09825	COG2103	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
JC773_09830	COG1263	PTS System
JC773_09830	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
JC773_09845	COG1522	sequence-specific DNA binding
JC773_09855	COG0531	amino acid
JC773_09865	COG1012	belongs to the aldehyde dehydrogenase family
JC773_09870	COG1132	(ABC) transporter
JC773_09875	COG1132	(ABC) transporter
JC773_09880	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
JC773_09885	COG0765	amino acid transport
JC773_09890	COG1126	abc transporter atp-binding protein
JC773_09905	COG0189	ligase activity
JC773_09910	COG4399	Belongs to the UPF0754 family
JC773_09915	COG3679	Belongs to the UPF0342 family
JC773_09920	COG4585	Histidine kinase
JC773_09925	COG2197	response regulator
JC773_09965	COG2094	Belongs to the DNA glycosylase MPG family
JC773_09970	COG0561	phosphatase activity
JC773_09985	COG0635	Involved in the biosynthesis of porphyrin-containing compound
JC773_10015	COG2244	polysaccharide biosynthetic process
JC773_10025	COG0860	N-Acetylmuramoyl-L-alanine amidase
JC773_10045	COG1696	Membrane protein involved in D-alanine export
JC773_10060	COG1024	Enoyl-CoA hydratase
JC773_10070	COG1363	Peptidase, m42
JC773_10085	COG2239	Acts as a magnesium transporter
JC773_10090	COG0772	Belongs to the SEDS family
JC773_10095	COG1115	amino acid carrier protein
JC773_10165	COG1476	TRANSCRIPTIONal
JC773_10300	COG1061	Type III restriction enzyme res subunit
JC773_10340	COG1472	Belongs to the glycosyl hydrolase 3 family
JC773_10345	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
JC773_10350	COG3829	transcription factor binding
JC773_10355	COG4638	Rieske (2fe-2S)
JC773_10360	COG1012	belongs to the aldehyde dehydrogenase family
JC773_10365	COG0473	3-isopropylmalate dehydrogenase activity
JC773_10375	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
JC773_10385	COG1064	alcohol dehydrogenase
JC773_10400	COG3246	L-lysine catabolic process to acetate
JC773_10445	COG4641	Protein conserved in bacteria
JC773_10460	COG3711	transcriptional antiterminator
JC773_10465	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
JC773_10465	COG2190	(PTS) system
JC773_10465	COG1263	PTS System
JC773_10470	COG2723	6-phospho-beta-galactosidase activity
JC773_10480	COG2376	Dihydroxyacetone kinase
JC773_10515	COG0420	3'-5' exonuclease activity
JC773_10520	COG4717	serine-type aminopeptidase activity
JC773_10525	COG3481	metal-dependent phosphohydrolase, HD sub domain
JC773_10530	COG0577	efflux transmembrane transporter activity
JC773_10535	COG1136	(ABC) transporter
JC773_10545	COG5002	protein histidine kinase activity
JC773_10550	COG0745	RESPONSE REGULATOR receiver
JC773_10560	COG1316	TRANSCRIPTIONal
JC773_10570	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
JC773_10575	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
JC773_10580	COG0554	Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate
JC773_10585	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
JC773_10605	COG1846	Transcriptional regulator
JC773_10610	COG4980	gas vesicle protein
JC773_10615	COG0537	adenosine 5'-monophosphoramidase activity
JC773_10625	COG1131	(ABC) transporter
JC773_10630	COG4473	ABC transporter
JC773_10650	COG3402	PFAM membrane-flanked domain
JC773_10660	COG2329	Antibiotic biosynthesis monooxygenase
JC773_10665	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
JC773_10670	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
JC773_10675	COG0276	Catalyzes the ferrous insertion into protoporphyrin IX
JC773_10680	COG1232	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
JC773_10705	COG1309	transcriptional regulator
JC773_10715	COG0438	transferase activity, transferring glycosyl groups
JC773_10715	COG1216	Glycosyl transferase, family 2
JC773_10730	COG1609	Transcriptional regulator
JC773_10740	COG1234	tRNA 3'-trailer cleavage
JC773_10745	COG0095	Lipoate-protein ligase
JC773_10750	COG0318	PFAM AMP-dependent synthetase and ligase
JC773_10765	COG2205	protein histidine kinase activity
JC773_10770	COG0745	RESPONSE REGULATOR receiver
JC773_10790	COG0501	Belongs to the peptidase M48B family
JC773_10795	COG0840	transmembrane signaling receptor activity
JC773_10800	COG0697	spore germination
JC773_10815	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
JC773_10820	COG2224	Isocitrate lyase
JC773_10825	COG1278	Cold shock
JC773_10830	COG4903	ComK protein
JC773_10835	COG0398	Pfam SNARE associated Golgi protein
JC773_10845	COG3857	The heterodimer acts as both an ATP-dependent DNA helicase and an ATP-dependent, dual-direction single-stranded exonuclease. Recognizes the chi site generating a DNA molecule suitable for the initiation of homologous recombination
JC773_10850	COG1074	ATP-dependent DNA helicase activity
JC773_10890	COG0179	Fumarylacetoacetate (FAA) hydrolase
JC773_10910	COG0367	asparagine synthase
JC773_10920	COG0753	catalase activity
JC773_10925	COG1874	Beta-galactosidase
JC773_10925	COG0366	Alpha amylase catalytic
JC773_10930	COG1666	GTP binding
JC773_10935	COG2996	Protein conserved in bacteria
JC773_10950	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
JC773_10965	COG0561	phosphatase activity
JC773_10985	COG2267	carboxylic ester hydrolase activity
JC773_11000	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
JC773_11005	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
JC773_11010	COG5504	Zn-dependent protease
JC773_11020	COG0180	Tryptophanyl-tRNA synthetase
JC773_11035	COG0601	transmembrane transport
JC773_11040	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
JC773_11045	COG0444	Belongs to the ABC transporter superfamily
JC773_11050	COG4608	Belongs to the ABC transporter superfamily
JC773_11055	COG0534	Mate efflux family protein
JC773_11060	COG4166	transmembrane transport
JC773_11075	COG0861	Integral membrane protein TerC family
JC773_11095	COG1164	Oligoendopeptidase f
JC773_11110	COG2346	COG2346, Truncated hemoglobins
JC773_11115	COG4116	CYTH
JC773_11125	COG2357	RelA SpoT domain protein
JC773_11135	COG0564	pseudouridine synthase activity
JC773_11145	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
JC773_11150	COG0772	Belongs to the SEDS family
JC773_11195	COG1216	Glycosyl transferase, family 2
JC773_11215	COG0457	Tetratricopeptide repeat
JC773_11215	COG0463	Glycosyl transferase, family 2
JC773_11235	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
JC773_11250	COG1091	dTDP-4-dehydrorhamnose reductase activity
JC773_11275	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
JC773_11280	COG2382	esterase
JC773_11295	COG5492	domain, Protein
JC773_11300	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
JC773_11310	COG1620	l-lactate permease
JC773_11315	COG5634	Uncharacterized conserved protein (DUF2278)
JC773_11355	COG0508	dehydrogenase complex catalyzes the overall conversion of
JC773_11360	COG0567	Dehydrogenase, E1 component
JC773_11370	COG0583	DNA-binding transcription factor activity
JC773_11375	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
JC773_11380	COG1012	belongs to the aldehyde dehydrogenase family
JC773_11395	COG0196	riboflavin kinase activity
JC773_11400	COG3162	membrane
JC773_11405	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
JC773_11410	COG0179	Fumarylacetoacetate (FAA) hydrolase
JC773_11425	COG0457	Tetratricopeptide repeat
JC773_11565	COG0582	viral genome integration into host DNA
JC773_11575	COG0582	viral genome integration into host DNA
JC773_11610	COG1686	Belongs to the peptidase S11 family
JC773_11615	COG0681	Belongs to the peptidase S26 family
JC773_11650	COG1012	belongs to the aldehyde dehydrogenase family
JC773_11660	COG1176	ABC-type spermidine putrescine transport system, permease component I
JC773_11665	COG1177	transmembrane transport
JC773_11670	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
JC773_11675	COG0671	phosphoesterase, PA-phosphatase related
JC773_11680	COG2409	Drug exporters of the RND superfamily
JC773_11690	COG0564	pseudouridine synthase activity
JC773_11700	COG2340	Cysteine-rich secretory protein family
JC773_11705	COG0247	lactate metabolic process
JC773_11710	COG0277	FAD linked oxidase domain protein
JC773_11715	COG3835	regulator
JC773_11725	COG0745	RESPONSE REGULATOR receiver
JC773_11730	COG5002	protein histidine kinase activity
JC773_11735	COG2186	Transcriptional regulator
JC773_11740	COG0247	lactate metabolic process
JC773_11745	COG1139	Iron-sulfur cluster binding protein
JC773_11750	COG1556	Lactate utilization protein
JC773_11755	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
JC773_11760	COG0584	glycerophosphoryl diester phosphodiesterase
JC773_11770	COG2267	carboxylic ester hydrolase activity
JC773_11775	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
JC773_11780	COG2116	formate transmembrane transporter activity
JC773_11785	COG0861	Integral membrane protein TerC family
JC773_11790	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
JC773_11800	COG2030	dehydratase
JC773_11820	COG1028	Short-chain dehydrogenase reductase Sdr
JC773_11825	COG3243	poly(R)-hydroxyalkanoic acid synthase
JC773_11830	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
JC773_11845	COG1840	ABC-type Fe3 transport system, periplasmic component
JC773_11850	COG3842	ATPase activity
JC773_11860	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
JC773_11865	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
JC773_11870	COG1349	DNA-binding transcription factor activity
JC773_11875	COG0235	Class ii aldolase
JC773_11885	COG2861	carbohydrate metabolic process
JC773_11895	COG3852	Histidine kinase
JC773_11900	COG1846	Transcriptional regulator
JC773_11915	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
JC773_11920	COG0720	synthase
JC773_11930	COG0780	Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1)
JC773_11935	COG4873	Protein conserved in bacteria
JC773_11945	COG0456	acetyltransferase
JC773_11960	COG1780	Probably involved in ribonucleotide reductase function
JC773_11975	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
JC773_11980	COG1725	Transcriptional regulator
JC773_11985	COG1131	(ABC) transporter
JC773_11995	COG1131	(ABC) transporter
JC773_12000	COG1277	ABC-type transport system involved in multi-copper enzyme maturation permease component
JC773_12015	COG1522	sequence-specific DNA binding
JC773_12030	COG1619	proteins homologs of microcin C7 resistance protein MccF
JC773_12035	COG2070	2-Nitropropane dioxygenase
JC773_12040	COG3966	Protein involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein)
JC773_12050	COG1696	Membrane protein involved in D-alanine export
JC773_12055	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
JC773_12070	COG0716	FMN binding
JC773_12095	COG1368	sulfuric ester hydrolase activity
JC773_12105	COG3173	Aminoglycoside phosphotransferase
JC773_12120	COG5609	conserved protein (DUF2294)
JC773_12125	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
JC773_12130	COG3002	Belongs to the UPF0753 family
JC773_12135	COG0288	reversible hydration of carbon dioxide
JC773_12140	COG0534	Mate efflux family protein
JC773_12155	COG1846	Transcriptional regulator
JC773_12165	COG1301	dicarboxylic acid transport
JC773_12170	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
JC773_12180	COG3874	Sporulation protein YtfJ
JC773_12200	COG0028	Belongs to the TPP enzyme family
JC773_12205	COG0440	acetolactate synthase activity
JC773_12210	COG0059	Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol- acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3- dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3- hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate
JC773_12215	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
JC773_12225	COG0065	Catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate
JC773_12230	COG0066	3-isopropylmalate dehydratase activity
JC773_12240	COG0040	Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of hisG enzymatic activity
JC773_12250	COG0131	Imidazoleglycerol-phosphate dehydratase
JC773_12255	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
JC773_12260	COG0106	1-(5-phosphoribosyl)-5- 5-phosphoribosylamino)methylideneamino imidazole-4-carboxamide isomerase
JC773_12265	COG0107	imidazoleglycerol-phosphate synthase activity
JC773_12270	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
JC773_12275	COG0140	phosphoribosyl-ATP diphosphatase activity
JC773_12290	COG1183	phosphatidylcholine synthase activity
JC773_12295	COG1368	sulfuric ester hydrolase activity
JC773_12305	COG0019	diaminopimelate decarboxylase activity
JC773_12315	COG0175	sulfate reduction
JC773_12320	COG2046	Belongs to the sulfate adenylyltransferase family
JC773_12325	COG0529	Catalyzes the synthesis of activated sulfate
JC773_12330	COG0155	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
JC773_12350	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
JC773_12350	COG1648	precorrin-2 dehydrogenase activity
JC773_12355	COG0733	neurotransmitter:sodium symporter activity
JC773_12370	COG3557	Belongs to the UPF0374 family
JC773_12375	COG1757	Na H antiporter
JC773_12390	COG4758	membrane
JC773_12395	COG4585	Histidine kinase
JC773_12400	COG2197	response regulator
JC773_12405	COG1114	Component of the transport system for branched-chain amino acids
JC773_12410	COG0737	Belongs to the 5'-nucleotidase family
JC773_12410	COG1525	nuclease
JC773_12410	COG4085	toxin activity
JC773_12445	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
JC773_12445	COG3711	transcriptional antiterminator
JC773_12450	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
JC773_12450	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
JC773_12450	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
JC773_12455	COG1482	cell wall glycoprotein biosynthetic process
JC773_12465	COG2801	Transposase and inactivated derivatives
JC773_12485	COG0730	response to heat
JC773_12490	COG0306	phosphate transporter
JC773_12495	COG1392	Phosphate transport regulator
JC773_12500	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
JC773_12510	COG3852	Histidine kinase
JC773_12515	COG1801	Protein of unknown function DUF72
JC773_12525	COG0582	viral genome integration into host DNA
JC773_12530	COG5002	protein histidine kinase activity
JC773_12535	COG0813	purine-nucleoside phosphorylase activity
JC773_12545	COG0392	lysyltransferase activity
JC773_12545	COG2898	Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms
JC773_12560	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
JC773_12565	COG1686	Belongs to the peptidase S11 family
JC773_12570	COG2715	membrane protein required for spore maturation
JC773_12575	COG0700	Nucleoside recognition
JC773_12580	COG1187	pseudouridine synthase activity
JC773_12590	COG1333	cytochrome c biogenesis protein
JC773_12595	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
JC773_12600	COG0745	RESPONSE REGULATOR receiver
JC773_12605	COG5002	protein histidine kinase activity
JC773_12610	COG2096	Adenosyltransferase
JC773_12625	COG3601	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
JC773_12630	COG1141	Ferredoxin
JC773_12640	COG0514	ATP-dependent DNA helicase (RecQ)
JC773_12645	COG1266	CAAX protease self-immunity
JC773_12655	COG1408	metallophosphoesterase
JC773_12670	COG0334	Belongs to the Glu Leu Phe Val dehydrogenases family
JC773_12685	COG0492	ferredoxin-NADP+ reductase activity
JC773_12700	COG0283	belongs to the cytidylate kinase family. Type 1 subfamily
JC773_12710	COG1304	FMN binding
JC773_12735	COG1160	GTP binding
JC773_12740	COG0240	glycerol-3-phosphate dehydrogenase [NAD(P)+] activity
JC773_12760	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
JC773_12770	COG0302	gtp cyclohydrolase
JC773_12775	COG0142	geranyltranstransferase activity
JC773_12780	COG2226	methyltransferase
JC773_12785	COG0142	geranyltranstransferase activity
JC773_12795	COG0082	Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system
JC773_12800	COG0337	Catalyzes the conversion of 3-deoxy-D-arabino- heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ)
JC773_12805	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
JC773_12810	COG0128	3-phosphoshikimate 1-carboxyvinyltransferase activity
JC773_12815	COG0457	Tetratricopeptide repeat
JC773_12820	COG5582	Belongs to the UPF0302 family
JC773_12835	COG1290	Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis
JC773_12845	COG4347	Protein of unknown function (DUF1405)
JC773_12860	COG2738	Putative neutral zinc metallopeptidase
JC773_12870	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
JC773_12875	COG1694	Mazg nucleotide pyrophosphohydrolase
JC773_12880	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
JC773_12885	COG1803	Methylglyoxal synthase
JC773_12890	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
JC773_12895	COG0438	transferase activity, transferring glycosyl groups
JC773_12900	COG0617	tRNA 3'-terminal CCA addition
JC773_12910	COG0413	3-methyl-2-oxobutanoate hydroxymethyltransferase activity
JC773_12915	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
JC773_12920	COG0853	Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
JC773_12925	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
JC773_12925	COG1199	ATP-dependent helicase activity
JC773_12945	COG3935	DnaD domain protein
JC773_12950	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
JC773_12960	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
JC773_12960	COG4499	WXG100 protein secretion system (Wss), protein YukC
JC773_12965	COG3331	DNA recombination
JC773_13000	COG4474	Belongs to the UPF0398 family
JC773_13005	COG3599	regulation of cell shape
JC773_13015	COG0116	Belongs to the methyltransferase superfamily
JC773_13025	COG1199	ATP-dependent helicase activity
JC773_13030	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
JC773_13035	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
JC773_13040	COG2233	PERMEase
JC773_13045	COG2311	Membrane
JC773_13050	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
JC773_13060	COG0456	acetyltransferase
JC773_13100	COG3766	membrane
JC773_13110	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
JC773_13115	COG1733	regulation of RNA biosynthetic process
JC773_13135	COG0328	RNA-DNA hybrid ribonuclease activity
JC773_13170	COG1278	Cold shock
JC773_13180	COG3162	membrane
JC773_13185	COG4147	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
JC773_13190	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
JC773_13195	COG0475	glutathione-regulated potassium exporter activity
JC773_13200	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
JC773_13205	COG2323	membrane
JC773_13210	COG1434	Gram-negative-bacterium-type cell wall biogenesis
JC773_13235	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
JC773_13245	COG2201	protein-glutamate methylesterase activity
JC773_13250	COG0643	Histidine kinase
JC773_13250	COG2198	Histidine kinase
JC773_13255	COG1776	CheC inhibitor of MCP methylation
JC773_13255	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
JC773_13270	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
JC773_13280	COG1728	Protein conserved in bacteria
JC773_13290	COG1256	bacterial-type flagellum assembly
JC773_13295	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
JC773_13315	COG1815	bacterial-type flagellum-dependent cell motility
JC773_13320	COG1558	bacterial-type flagellum-dependent cell motility
JC773_13335	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
JC773_13345	COG1157	protein secretion by the type III secretion system
JC773_13380	COG0784	Response regulator, receiver
JC773_13380	COG0835	chemotaxis
JC773_13390	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
JC773_13395	COG0457	Tetratricopeptide repeat
JC773_13395	COG0463	Glycosyl transferase, family 2
JC773_13410	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
JC773_13415	COG0741	lytic transglycosylase activity
JC773_13425	COG1868	FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
JC773_13430	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
JC773_13430	COG1776	CheC inhibitor of MCP methylation
JC773_13440	COG1338	Plays a role in the flagellum-specific transport system
JC773_13445	COG1987	bacterial-type flagellum assembly
JC773_13455	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
JC773_13460	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
JC773_13465	COG1419	protein localization to endoplasmic reticulum
JC773_13470	COG4786	Flagellar basal body rod
JC773_13475	COG0577	efflux transmembrane transporter activity
JC773_13475	COG1136	(ABC) transporter
JC773_13505	COG1309	transcriptional regulator
JC773_13525	COG2814	Major facilitator Superfamily
JC773_13570	COG0367	asparagine synthase
JC773_13590	COG1802	Transcriptional regulator
JC773_13595	COG0697	spore germination
JC773_13605	COG1757	Na H antiporter
JC773_13630	COG0534	Mate efflux family protein
JC773_13635	COG3340	Belongs to the peptidase S51 family
JC773_13640	COG2733	membrane
JC773_13645	COG1280	lysine exporter protein (LysE YggA)
JC773_13650	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
JC773_13660	COG2502	aspartate--ammonia ligase
JC773_13670	COG0109	protoheme IX farnesyltransferase activity
JC773_13740	COG1131	(ABC) transporter
JC773_13790	COG4512	PFAM Accessory gene regulator B
JC773_13805	COG3290	protein histidine kinase activity
JC773_13820	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
JC773_13825	COG0488	(ABC) transporter
JC773_13830	COG4166	transmembrane transport
JC773_13835	COG2223	nitrite transmembrane transporter activity
JC773_13840	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
JC773_13845	COG2244	polysaccharide biosynthetic process
JC773_13850	COG0733	neurotransmitter:sodium symporter activity
JC773_13855	COG5566	PFAM Mor transcription activator
JC773_13865	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
JC773_13870	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
JC773_13885	COG0129	dihydroxy-acid dehydratase activity
JC773_13890	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
JC773_13895	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
JC773_13900	COG2814	Major facilitator Superfamily
JC773_13905	COG3384	dioxygenase
JC773_13925	COG0402	S-adenosylhomocysteine deaminase activity
JC773_13930	COG4166	transmembrane transport
JC773_13940	COG1914	H( )-stimulated, divalent metal cation uptake system
JC773_13945	COG1054	Belongs to the UPF0176 family
JC773_13955	COG0083	homoserine kinase activity
JC773_13965	COG2390	Transcriptional regulator
JC773_13970	COG0274	Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy- D-ribose 5-phosphate
JC773_13995	COG1510	regulation of RNA biosynthetic process
JC773_14000	COG1012	belongs to the aldehyde dehydrogenase family
JC773_14005	COG1454	alcohol dehydrogenase
JC773_14020	COG1012	belongs to the aldehyde dehydrogenase family
JC773_14025	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
JC773_14030	COG0628	permease
JC773_14040	COG0523	cobalamin synthesis protein
JC773_14065	COG1686	Belongs to the peptidase S11 family
JC773_14080	COG0791	NLP P60 protein
JC773_14080	COG1388	LysM domain
JC773_14085	COG0300	oxidoreductase activity
JC773_14095	COG0460	homoserine dehydrogenase
JC773_14105	COG0083	homoserine kinase activity
JC773_14110	COG1316	TRANSCRIPTIONal
JC773_14125	COG1285	pathogenesis
JC773_14130	COG1247	-acetyltransferase
JC773_14145	COG1752	Esterase of the alpha-beta hydrolase superfamily
JC773_14165	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
JC773_14170	COG0577	efflux transmembrane transporter activity
JC773_14175	COG2409	Drug exporters of the RND superfamily
JC773_14180	COG1404	Belongs to the peptidase S8 family
JC773_14195	COG0840	transmembrane signaling receptor activity
JC773_14210	COG3949	Membrane
JC773_14215	COG0783	Belongs to the Dps family
JC773_14235	COG0523	cobalamin synthesis protein
JC773_14245	COG0803	Belongs to the bacterial solute-binding protein 9 family
JC773_14270	COG0477	Major facilitator Superfamily
JC773_14290	COG1492	cobalamin metabolic process
JC773_14310	COG1733	regulation of RNA biosynthetic process
JC773_14315	COG0477	Major facilitator Superfamily
JC773_14330	COG1902	pentaerythritol trinitrate reductase activity
JC773_14335	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
JC773_14345	COG4166	transmembrane transport
JC773_14350	COG0346	lactoylglutathione lyase activity
JC773_14360	COG5337	Spore coat protein CotH
JC773_14365	COG1051	belongs to the nudix hydrolase family
JC773_14370	COG0586	Pfam SNARE associated Golgi protein
JC773_14375	COG2244	polysaccharide biosynthetic process
JC773_14385	COG0701	Predicted permease
JC773_14390	COG3689	TIGRFAM TIGR03943 family protein
JC773_14395	COG1607	acyl-coa hydrolase
JC773_14405	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
JC773_14415	COG1028	Short-chain dehydrogenase reductase Sdr
JC773_14425	COG2839	Protein conserved in bacteria
JC773_14430	COG1253	flavin adenine dinucleotide binding
JC773_14445	COG1114	Component of the transport system for branched-chain amino acids
JC773_14460	COG0860	N-Acetylmuramoyl-L-alanine amidase
JC773_14470	COG1876	peptidase activity
JC773_14520	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
JC773_14525	COG1819	glycosyl
JC773_14530	COG1819	glycosyl
JC773_14535	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
JC773_14580	COG4499	WXG100 protein secretion system (Wss), protein YukC
JC773_14650	COG3874	Sporulation protein YtfJ
JC773_14675	COG2226	methyltransferase
JC773_14700	COG0386	Belongs to the glutathione peroxidase family
JC773_14725	COG0640	Transcriptional regulator
JC773_14730	COG0798	PFAM Bile acid sodium symporter
JC773_14735	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
JC773_14775	COG1418	mRNA catabolic process
JC773_14780	COG0488	(ABC) transporter
JC773_14790	COG0629	single-stranded DNA binding
JC773_14795	COG1413	lyase activity
JC773_14810	COG2136	Putative SAM-dependent methyltransferase
JC773_14810	COG2521	methyltransferase
JC773_14815	COG0018	arginyl-trna synthetase
JC773_14825	COG0733	neurotransmitter:sodium symporter activity
JC773_14830	COG0596	Alpha beta hydrolase
JC773_14840	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
JC773_14845	COG0477	Major facilitator Superfamily
JC773_14860	COG1454	alcohol dehydrogenase
JC773_14865	COG2610	gluconate transmembrane transporter activity
JC773_14875	COG0456	acetyltransferase
JC773_14880	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
JC773_14890	COG1131	(ABC) transporter
JC773_14895	COG4473	ABC transporter
JC773_14910	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
JC773_14915	COG0207	Catalyzes the reductive methylation of 2'-deoxyuridine- 5'-monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by-product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis
JC773_14925	COG0768	penicillin binding
JC773_14935	COG0204	Acyl-transferase
JC773_14940	COG1272	protein, Hemolysin III
JC773_14945	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
JC773_14950	COG0805	protein transport
JC773_14960	COG1307	EDD domain protein, DegV family
JC773_14970	COG1999	signal sequence binding
JC773_14975	COG0071	Belongs to the small heat shock protein (HSP20) family
JC773_14980	COG0367	asparagine synthase
JC773_14990	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
JC773_15010	COG0071	Belongs to the small heat shock protein (HSP20) family
JC773_15020	COG1737	Transcriptional regulator
JC773_15025	COG1070	Carbohydrate kinase
JC773_15035	COG1023	phosphogluconate dehydrogenase (decarboxylating) activity
JC773_15090	COG1151	hydroxylamine reductase activity
JC773_15100	COG1253	flavin adenine dinucleotide binding
JC773_15105	COG5506	Protein of unknown function (DUF1694)
JC773_15125	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
JC773_15130	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
JC773_15135	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
JC773_15140	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
JC773_15145	COG0456	acetyltransferase
JC773_15150	COG3829	transcription factor binding
JC773_15155	COG1509	lysine 2,3-aminomutase activity
JC773_15165	COG4479	Belongs to the UPF0346 family
JC773_15175	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
JC773_15210	COG0515	serine threonine protein kinase
JC773_15210	COG1357	PFAM Pentapeptide repeats (8 copies)
JC773_15215	COG0671	phosphoesterase, PA-phosphatase related
JC773_15220	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
JC773_15225	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
JC773_15265	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
JC773_15275	COG0726	polysaccharide deacetylase
JC773_15280	COG1408	metallophosphoesterase
JC773_15285	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
JC773_15290	COG2323	membrane
JC773_15295	COG0671	phosphoesterase, PA-phosphatase related
JC773_15300	COG4990	cell redox homeostasis
JC773_15315	COG1280	lysine exporter protein (LysE YggA)
JC773_15320	COG3403	YqcI/YcgG family
JC773_15345	COG4499	WXG100 protein secretion system (Wss), protein YukC
JC773_15345	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
JC773_15350	COG0372	Belongs to the citrate synthase family
JC773_15355	COG2079	MmgE PrpD family protein
JC773_15360	COG2513	Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate
JC773_15365	COG1960	acyl-CoA dehydrogenase activity
JC773_15370	COG2084	Dehydrogenase
JC773_15375	COG1012	belongs to the aldehyde dehydrogenase family
JC773_15385	COG1280	lysine exporter protein (LysE YggA)
JC773_15405	COG0420	3'-5' exonuclease activity
JC773_15410	COG0419	ATPase involved in DNA repair
JC773_15415	COG3104	oligopeptide transport
JC773_15445	COG1942	4-Oxalocrotonate Tautomerase
JC773_15470	COG1028	Short-chain dehydrogenase reductase Sdr
JC773_15475	COG1169	isochorismate synthase
JC773_15480	COG1021	2,3-dihydroxybenzoate-AMP ligase
JC773_15485	COG1535	isochorismatase
JC773_15485	COG3433	isochorismatase activity
JC773_15490	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
JC773_15495	COG3251	PFAM MbtH domain protein
JC773_15515	COG0776	regulation of translation
JC773_15535	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
JC773_15570	COG3208	Thioesterase involved in non-ribosomal peptide biosynthesis
JC773_15575	COG1232	Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX
JC773_15580	COG0667	Aldo Keto reductase
JC773_15600	COG0010	Belongs to the arginase family
JC773_15610	COG1132	(ABC) transporter
JC773_15615	COG1132	(ABC) transporter
JC773_15645	COG1649	PFAM Uncharacterised BCR, COG1649
JC773_15660	COG2971	BadF BadG BcrA BcrD
JC773_15680	COG0588	phosphoglycerate mutase activity
JC773_15710	COG2195	Cleaves the N-terminal amino acid of tripeptides
JC773_15720	COG1960	acyl-CoA dehydrogenase activity
JC773_15725	COG0439	Biotin carboxylase
JC773_15730	COG0511	ligase activity, forming carbon-carbon bonds
JC773_15735	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
JC773_15740	COG1024	Enoyl-CoA hydratase
JC773_15745	COG4799	Acetyl-CoA carboxylase, carboxyltransferase component subunits alpha and beta
JC773_15750	COG0365	Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA
JC773_15760	COG1216	Glycosyl transferase, family 2
JC773_15765	COG0640	Transcriptional regulator
JC773_15770	COG1686	Belongs to the peptidase S11 family
JC773_15775	COG5002	protein histidine kinase activity
JC773_15805	COG0789	Transcriptional regulator
JC773_15830	COG0745	RESPONSE REGULATOR receiver
JC773_15855	COG2002	toxin-antitoxin pair type II binding
JC773_15875	COG0693	protein deglycase activity
JC773_15880	COG0201	protein transport
JC773_15905	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
JC773_15910	COG0322	excinuclease ABC activity
JC773_15915	COG2318	DinB family
JC773_15925	COG4667	esterase of the alpha-beta hydrolase superfamily
JC773_15970	COG2223	nitrite transmembrane transporter activity
JC773_16025	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
JC773_16030	COG1279	arginine transmembrane transporter activity
JC773_16065	COG1794	racemase activity, acting on amino acids and derivatives
JC773_16075	COG2828	Protein conserved in bacteria
JC773_16080	COG5002	protein histidine kinase activity
JC773_16085	COG0561	phosphatase activity
JC773_16105	COG2124	cytochrome p450
JC773_16150	COG3512	CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
JC773_16180	COG0819	Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway
JC773_16185	COG4146	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
JC773_16190	COG0673	inositol 2-dehydrogenase activity
JC773_16215	COG1609	Transcriptional regulator
JC773_16220	COG3718	enzyme involved in inositol metabolism
JC773_16225	COG0673	inositol 2-dehydrogenase activity
JC773_16235	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
JC773_16245	COG2959	enzyme of heme biosynthesis
JC773_16275	COG1878	Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation
JC773_16280	COG3844	kynureninase activity
JC773_16290	COG1028	Short-chain dehydrogenase reductase Sdr
JC773_16300	COG4176	ABC-type proline glycine betaine transport system permease component
JC773_16305	COG0517	IMP dehydrogenase activity
JC773_16305	COG4175	Glycine betaine
JC773_16335	COG2153	protein acetylation
JC773_16370	COG0514	ATP-dependent DNA helicase (RecQ)
JC773_16395	COG4637	Psort location Cytoplasmic, score
JC773_16400	COG1227	inorganic diphosphatase activity
JC773_16405	COG3397	chitin binding
JC773_16450	COG4166	transmembrane transport
JC773_16460	COG4948	Mandelate Racemase Muconate Lactonizing
JC773_16485	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
JC773_16485	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
JC773_16490	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
JC773_16490	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
JC773_16510	COG1307	EDD domain protein, DegV family
JC773_16570	COG2261	transglycosylase associated protein
JC773_16575	COG0675	Transposase, IS605 OrfB family
JC773_16610	COG0436	Aminotransferase
JC773_16625	COG3973	AAA domain
JC773_16630	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
JC773_16655	COG0628	permease
JC773_16665	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
JC773_16670	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
JC773_16675	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
JC773_16690	COG2746	aminoglycoside 3-N-acetyltransferase activity
JC773_16715	COG0454	-acetyltransferase
JC773_16715	COG0456	acetyltransferase
JC773_16740	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
JC773_16745	COG1368	sulfuric ester hydrolase activity
JC773_16750	COG0488	(ABC) transporter
JC773_16755	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
JC773_16755	COG1605	Chorismate mutase
JC773_16775	COG0346	lactoylglutathione lyase activity
JC773_16790	COG1343	CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette
JC773_16795	COG1518	maintenance of DNA repeat elements
JC773_16830	COG2329	Antibiotic biosynthesis monooxygenase
JC773_16845	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
JC773_16870	COG0494	nUDIX hydrolase
JC773_16885	COG0456	acetyltransferase
JC773_16890	COG0477	Major facilitator Superfamily
JC773_16900	COG0697	spore germination
JC773_16905	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
JC773_16915	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
JC773_16940	COG0833	amino acid
JC773_16960	COG2039	Removes 5-oxoproline from various penultimate amino acid residues except L-proline
JC773_16975	COG1540	5-oxoprolinase (ATP-hydrolyzing) activity
JC773_16980	COG1984	allophanate hydrolase subunit 2
JC773_16985	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
JC773_16990	COG1414	Transcriptional regulator
JC773_17005	COG1960	acyl-CoA dehydrogenase activity
JC773_17015	COG3314	Sporulation integral membrane protein YlbJ
JC773_17030	COG0346	lactoylglutathione lyase activity
JC773_17040	COG1210	Utp--glucose-1-phosphate uridylyltransferase
JC773_17045	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
JC773_17050	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
JC773_17055	COG0438	transferase activity, transferring glycosyl groups
JC773_17070	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
JC773_17075	COG0438	transferase activity, transferring glycosyl groups
JC773_17080	COG2334	A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response
JC773_17090	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
JC773_17110	COG4851	CamS sex pheromone cAM373 precursor
JC773_17260	COG0477	Major facilitator Superfamily
JC773_17275	COG1846	Transcriptional regulator
JC773_17280	COG2814	Major facilitator Superfamily
JC773_17290	COG2031	fatty acid transporter
JC773_17320	COG1122	ATPase activity
JC773_17345	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
JC773_17365	COG1131	(ABC) transporter
JC773_17385	COG2365	Tyrosine phosphatase family
JC773_17405	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
JC773_17410	COG4468	UDPglucose--hexose-1-phosphate uridylyltransferase
JC773_17415	COG0153	Catalyzes the transfer of the gamma-phosphate of ATP to D-galactose to form alpha-D-galactose-1-phosphate (Gal-1-P)
JC773_17420	COG2017	converts alpha-aldose to the beta-anomer
JC773_17430	COG2207	Transcriptional regulator
JC773_17435	COG5492	domain, Protein
JC773_17445	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
JC773_17450	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
JC773_17450	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
JC773_17455	COG3716	PTS system mannose fructose sorbose family IID component
JC773_17460	COG3715	PTS system
JC773_17470	COG1028	Short-chain dehydrogenase reductase Sdr
JC773_17475	COG3717	Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate
JC773_17480	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
JC773_17515	COG3449	Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell
JC773_17520	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
JC773_17525	COG0579	oxidoreductase
JC773_17530	COG4843	Uncharacterized protein conserved in bacteria (DUF2179)
JC773_17540	COG1253	flavin adenine dinucleotide binding
JC773_17545	COG0789	Transcriptional regulator
JC773_17550	COG3813	Protein conserved in bacteria
JC773_17565	COG0384	phenazine biosynthesis protein PhzF
JC773_17605	COG0577	efflux transmembrane transporter activity
JC773_17605	COG1136	(ABC) transporter
JC773_17720	COG2076	Multidrug Resistance protein
JC773_17735	COG2072	flavoprotein involved in K transport
JC773_17765	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
JC773_17770	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
JC773_17780	COG1193	negative regulation of DNA recombination
JC773_17790	COG1164	Oligoendopeptidase f
JC773_17810	COG0584	glycerophosphoryl diester phosphodiesterase
JC773_17815	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
JC773_17845	COG3397	chitin binding
JC773_17855	COG0397	Uncharacterized ACR, YdiU/UPF0061 family
JC773_17860	COG0277	FAD linked oxidase domain protein
JC773_17865	COG1285	pathogenesis
JC773_17870	COG2720	vancomycin resistance protein
JC773_17910	COG4824	toxin secretion phage lysis holin
JC773_18035	COG0270	DNA (cytosine-5-)-methyltransferase activity
JC773_18085	COG0817	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group
JC773_18185	COG1484	DNA-dependent DNA replication
JC773_18225	COG0582	viral genome integration into host DNA
JC773_18250	COG1278	Cold shock
JC773_18260	COG1028	Short-chain dehydrogenase reductase Sdr
JC773_18265	COG0165	Argininosuccinate lyase
JC773_18280	COG3409	Peptidoglycan-binding domain 1 protein
JC773_18295	COG4145	pantothenate transmembrane transporter activity
JC773_18305	COG1012	belongs to the aldehyde dehydrogenase family
JC773_18315	COG1657	PFAM Prenyltransferase squalene oxidase
JC773_18320	COG1963	PFAM Acid phosphatase vanadium-dependent haloperoxidase related
JC773_18325	COG2962	Rard protein
JC773_18360	COG2226	methyltransferase
JC773_18365	COG4166	transmembrane transport
JC773_18370	COG4166	transmembrane transport
JC773_18375	COG1301	dicarboxylic acid transport
JC773_18380	COG0673	inositol 2-dehydrogenase activity
JC773_18385	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
JC773_18390	COG0187	DNA topoisomerase II activity
JC773_18395	COG1832	CoA-binding protein
JC773_18400	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
JC773_18405	COG0745	RESPONSE REGULATOR receiver
JC773_18420	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
JC773_18425	COG4841	protein insertion into membrane
JC773_18430	COG0824	Thioesterase
JC773_18460	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
JC773_18465	COG3655	Transcriptional regulator
JC773_18475	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
JC773_18520	COG0013	Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain
JC773_18525	COG0318	PFAM AMP-dependent synthetase and ligase
JC773_18555	COG0457	Tetratricopeptide repeat
JC773_18605	COG1942	4-Oxalocrotonate Tautomerase
JC773_18655	COG4935	Belongs to the peptidase S8 family
JC773_18655	COG1404	Belongs to the peptidase S8 family
JC773_18710	COG3023	N-Acetylmuramoyl-L-alanine amidase
JC773_18720	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
JC773_18730	COG5002	protein histidine kinase activity
JC773_18735	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
JC773_18740	COG0010	Belongs to the arginase family
JC773_18745	COG1228	amidohydrolase
JC773_18750	COG2987	Catalyzes the conversion of urocanate to 4-imidazolone- 5-propionate
JC773_18755	COG2986	histidine ammonia-lyase
JC773_18775	COG4846	Membrane protein involved in cytochrome C biogenesis
JC773_18780	COG0785	Cytochrome C biogenesis protein
JC773_18790	COG1473	amidohydrolase
JC773_18795	COG0583	DNA-binding transcription factor activity
JC773_18800	COG1380	Effector of murein hydrolase LrgA
JC773_18805	COG1346	cytolysis
JC773_18810	COG4187	Peptidase family M20/M25/M40
JC773_18820	COG0833	amino acid
JC773_18830	COG0730	response to heat
JC773_18840	COG5632	N-Acetylmuramoyl-L-alanine amidase
JC773_18840	COG3409	Peptidoglycan-binding domain 1 protein
JC773_18855	COG1132	(ABC) transporter
JC773_18860	COG1132	(ABC) transporter
JC773_18865	COG3763	UPF0154 protein
JC773_18880	COG3639	organic phosphonate transmembrane transporter activity
JC773_18885	COG3639	organic phosphonate transmembrane transporter activity
JC773_18900	COG0737	Belongs to the 5'-nucleotidase family
JC773_18905	COG4224	UPF0291 protein
JC773_18910	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
JC773_18915	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
JC773_18930	COG1695	Transcriptional regulator
JC773_18970	COG3328	transposase activity
JC773_18975	COG3328	transposase activity
JC773_18985	COG1598	PFAM Uncharacterised protein family UPF0150
JC773_18990	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
JC773_19010	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
JC773_19020	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
JC773_19035	COG0730	response to heat
JC773_19060	COG2002	toxin-antitoxin pair type II binding
JC773_19065	COG1929	Belongs to the glycerate kinase type-1 family
JC773_19075	COG2190	(PTS) system
JC773_19075	COG1263	PTS System
JC773_19075	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
JC773_19110	COG0174	glutamine synthetase
JC773_19115	COG0789	Transcriptional regulator
JC773_19120	COG4100	CystaTHIonine beta-lyase family protein involved in aluminum resistance
JC773_19125	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
JC773_19130	COG2860	membrane
JC773_19140	COG0464	growth
JC773_19155	COG1923	regulation of RNA biosynthetic process
JC773_19160	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
JC773_19170	COG3584	3D domain protein
JC773_19170	COG1388	LysM domain
JC773_19175	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
JC773_19175	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
JC773_19175	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
JC773_19180	COG1105	Belongs to the carbohydrate kinase PfkB family
JC773_19185	COG1349	DNA-binding transcription factor activity
JC773_19190	COG2322	membrane
JC773_19210	COG2116	formate transmembrane transporter activity
JC773_19220	COG1937	Protein conserved in bacteria
JC773_19225	COG2819	hydrolase of the alpha beta superfamily
JC773_19230	COG1120	ATPase activity
JC773_19235	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JC773_19240	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
JC773_19245	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
JC773_19250	COG2706	6-phosphogluconolactonase activity
JC773_19255	COG2195	Cleaves the N-terminal amino acid of tripeptides
JC773_19265	COG0346	lactoylglutathione lyase activity
JC773_19275	COG1113	amino acid transport
JC773_19285	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
JC773_19290	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
JC773_19300	COG4550	Control of competence regulator ComK, YlbF/YmcA
JC773_19305	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
JC773_19310	COG1013	pyruvate-flavodoxin oxidoreductase activity
JC773_19315	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
JC773_19315	COG0674	pyruvate-flavodoxin oxidoreductase activity
JC773_19325	COG2359	stage V sporulation protein S
JC773_19330	COG1692	metallophosphoesterase
JC773_19335	COG1418	mRNA catabolic process
JC773_19340	COG0468	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage
JC773_19345	COG1058	Belongs to the CinA family
JC773_19345	COG1546	Belongs to the CinA family
JC773_19350	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
JC773_19355	COG1426	Protein conserved in bacteria
JC773_19370	COG0300	oxidoreductase activity
JC773_19375	COG0612	Peptidase, M16
JC773_19380	COG0612	Peptidase, M16
JC773_19385	COG1079	Belongs to the binding-protein-dependent transport system permease family
JC773_19390	COG4603	Belongs to the binding-protein-dependent transport system permease family
JC773_19395	COG3845	ABC transporter
JC773_19400	COG1744	ABC transporter substrate-binding protein PnrA-like
JC773_19405	COG2188	Transcriptional regulator
JC773_19410	COG1674	ftsk spoiiie
JC773_19415	COG0675	Transposase, IS605 OrfB family
JC773_19430	COG0740	serine-type endopeptidase activity
JC773_19455	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
JC773_19470	COG0527	aspartate kinase activity
JC773_19475	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
JC773_19480	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
JC773_19485	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
JC773_19490	COG1873	PFAM PRC-barrel domain
JC773_19495	COG0612	Peptidase, M16
JC773_19500	COG0726	polysaccharide deacetylase
JC773_19505	COG1185	polyribonucleotide nucleotidyltransferase activity
JC773_19515	COG0196	riboflavin kinase activity
JC773_19520	COG0130	Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs
JC773_19525	COG0858	One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA
JC773_19530	COG1550	Protein conserved in bacteria
JC773_19535	COG0532	One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex
JC773_19540	COG1358	cellular component organization or biogenesis
JC773_19545	COG2740	Nucleic-acid-binding protein implicated in transcription termination
JC773_19550	COG0195	Participates in both transcription termination and antitermination
JC773_19555	COG0779	Required for maturation of 30S ribosomal subunits
JC773_19565	COG0442	prolyl-tRNA aminoacylation
JC773_19570	COG0750	zinc metalloprotease
JC773_19580	COG4589	Belongs to the CDS family
JC773_19590	COG0233	cytoplasmic translational termination
JC773_19595	COG0528	UMP kinase activity
JC773_19600	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
JC773_19605	COG0052	Belongs to the universal ribosomal protein uS2 family
JC773_19610	COG4465	DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor
JC773_19615	COG1220	this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis
JC773_19620	COG5405	Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery
JC773_19625	COG4974	Belongs to the 'phage' integrase family
JC773_19630	COG1206	Catalyzes the folate-dependent formation of 5-methyl- uridine at position 54 (M-5-U54) in all tRNAs
JC773_19635	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
JC773_19640	COG0758	DNA mediated transformation
JC773_19645	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
JC773_19650	COG0045	succinate-CoA ligase (ADP-forming) activity
JC773_19655	COG0164	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids
JC773_19670	COG0335	large ribosomal subunit rRNA binding
JC773_19675	COG0336	Belongs to the RNA methyltransferase TrmD family
JC773_19680	COG0806	An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes
JC773_19685	COG1837	Belongs to the UPF0109 family
JC773_19690	COG0228	four-way junction DNA binding
JC773_19695	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
JC773_19700	COG2739	Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY ffh. May be a regulatory protein
JC773_19705	COG0552	protein localization to endoplasmic reticulum
JC773_19710	COG1196	nuclear chromosome segregation
JC773_19715	COG0571	ribonuclease III activity
JC773_19720	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
JC773_19725	COG1028	Short-chain dehydrogenase reductase Sdr
JC773_19730	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
JC773_19735	COG0416	fatty acid biosynthetic process
JC773_19740	COG2050	protein possibly involved in aromatic compounds catabolism
JC773_19740	COG1349	DNA-binding transcription factor activity
JC773_19745	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
JC773_19750	COG1461	Dihydroxyacetone kinase
JC773_19755	COG1302	Protein conserved in bacteria
JC773_19760	COG0227	Belongs to the bacterial ribosomal protein bL28 family
JC773_19770	COG1564	THIamine pyrophosphokinase
JC773_19775	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
JC773_19780	COG1162	GTPase activity
JC773_19785	COG2815	serine threonine protein kinase
JC773_19785	COG0515	serine threonine protein kinase
JC773_19790	COG0631	protein serine/threonine phosphatase activity
JC773_19795	COG0820	rRNA (adenine-C2-)-methyltransferase activity
JC773_19800	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
JC773_19800	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
JC773_19805	COG0223	Attaches a formyl group to the free amino group of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus
JC773_19810	COG0242	peptide deformylase activity
JC773_19815	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
JC773_19820	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
JC773_19825	COG1758	RNA polymerase activity
JC773_19840	COG1561	YicC-like family, N-terminal region
JC773_19845	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
JC773_19870	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
JC773_19875	COG0284	orotidine-5'-phosphate decarboxylase activity
JC773_19880	COG0167	dihydroorotate dehydrogenase activity
JC773_19885	COG0543	2 iron, 2 sulfur cluster binding
JC773_19890	COG0458	carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
JC773_19900	COG0044	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
JC773_19905	COG0540	Belongs to the ATCase OTCase family
JC773_19915	COG2065	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
JC773_19920	COG0564	pseudouridine synthase activity
JC773_19925	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
JC773_19935	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
JC773_19940	COG3599	regulation of cell shape
JC773_19945	COG2302	S4 RNA-binding domain
JC773_19950	COG0762	integral membrane protein
JC773_19955	COG1799	cell septum assembly
JC773_19960	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
JC773_19970	COG1873	PFAM PRC-barrel domain
JC773_19975	COG1191	sigma factor activity
JC773_19980	COG1191	sigma factor activity
JC773_19990	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
JC773_19995	COG0849	cell division
JC773_20000	COG1589	Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly
JC773_20010	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
JC773_20015	COG0772	Belongs to the SEDS family
JC773_20020	COG0771	Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA)
JC773_20025	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
JC773_20030	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
JC773_20035	COG0768	penicillin binding
JC773_20040	COG0768	penicillin binding
JC773_20045	COG4839	cell division protein FtsL
JC773_20050	COG0275	rRNA processing
JC773_20055	COG4365	Involved in bacillithiol (BSH) biosynthesis. May catalyze the last step of the pathway, the addition of cysteine to glucosamine malate (GlcN-Mal) to generate BSH
JC773_20060	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
JC773_20065	COG0454	-acetyltransferase
JC773_20075	COG0333	Belongs to the bacterial ribosomal protein bL32 family
JC773_20080	COG1399	metal-binding, possibly nucleic acid-binding protein
JC773_20085	COG1323	Belongs to the UPF0348 family
JC773_20090	COG3480	Lon protease (S16) C-terminal proteolytic domain
JC773_20095	COG1752	Esterase of the alpha-beta hydrolase superfamily
JC773_20100	COG3314	Sporulation integral membrane protein YlbJ
JC773_20105	COG0669	Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate
JC773_20110	COG0742	ribosomal rna small subunit methyltransferase
JC773_20120	COG4471	UPF0298 protein
JC773_20125	COG3679	Belongs to the UPF0342 family
JC773_20130	COG0406	alpha-ribazole phosphatase activity
JC773_20145	COG2340	Cysteine-rich secretory protein family
JC773_20155	COG3336	cytochrome c oxidase
JC773_20170	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
JC773_20180	COG0109	protoheme IX farnesyltransferase activity
JC773_20185	COG1612	heme a metabolic process
JC773_20190	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
JC773_20195	COG0772	Belongs to the SEDS family
JC773_20200	COG4838	Belongs to the UPF0358 family
JC773_20205	COG2041	Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce both (R-) and (S-) diastereoisomers of methionine sulfoxide
JC773_20210	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
JC773_20220	COG4896	Protein conserved in bacteria
JC773_20235	COG1217	gtp-binding protein TYPA
JC773_20245	COG0483	inositol monophosphate 1-phosphatase activity
JC773_20255	COG4493	Belongs to the UPF0637 family
JC773_20260	COG4476	Belongs to the UPF0223 family
JC773_20265	COG1982	Orn Lys Arg decarboxylase major
JC773_20305	COG0508	dehydrogenase complex catalyzes the overall conversion of
JC773_20315	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
JC773_20330	COG0561	phosphatase activity
JC773_20335	COG5503	Protein of unknown function (DUF1447)
JC773_20340	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
JC773_20345	COG0569	domain protein
JC773_20355	COG1473	amidohydrolase
JC773_20360	COG2171	N-acyltransferase activity
JC773_20365	COG0583	DNA-binding transcription factor activity
JC773_20370	COG0517	IMP dehydrogenase activity
JC773_20380	COG1978	Selenoprotein B, glycine betaine sarcosine D-proline reductase family
JC773_20390	COG4703	Protein of unknown function (DUF1797)
JC773_20405	COG2200	EAL domain
JC773_20410	COG1028	Short-chain dehydrogenase reductase Sdr
JC773_20415	COG1408	metallophosphoesterase
JC773_20425	COG0855	Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP)
JC773_20475	COG2814	Major facilitator Superfamily
JC773_20480	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
JC773_20490	COG3209	COG3209 Rhs family protein
JC773_20500	COG2205	protein histidine kinase activity
JC773_20510	COG0436	Aminotransferase
JC773_20515	COG1609	Transcriptional regulator
JC773_20545	COG0183	Belongs to the thiolase family
JC773_20570	COG1695	Transcriptional regulator
JC773_20575	COG1028	Short-chain dehydrogenase reductase Sdr
JC773_20585	COG0182	Catalyzes the interconversion of methylthioribose-1- phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1- P)
JC773_20590	COG4857	Catalyzes the phosphorylation of methylthioribose into methylthioribose-1-phosphate
JC773_20595	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
JC773_20600	COG0436	Aminotransferase
JC773_20605	COG1850	ribulose-bisphosphate carboxylase activity
JC773_20610	COG4359	Dephosphorylates 2-hydroxy-3-keto-5-methylthiopentenyl- 1-phosphate (HK-MTPenyl-1-P) yielding 1,2-dihydroxy-3-keto-5- methylthiopentene (DHK-MTPene)
JC773_20615	COG0235	Class ii aldolase
JC773_20620	COG1791	Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway
JC773_20635	COG2084	Dehydrogenase
JC773_20645	COG2199	diguanylate cyclase activity
JC773_20650	COG0778	Nitroreductase
JC773_20675	COG1263	PTS System
JC773_20675	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
JC773_20675	COG2190	(PTS) system
JC773_20680	COG3711	transcriptional antiterminator
JC773_20690	COG2188	Transcriptional regulator
JC773_20695	COG0363	glucosamine-6-phosphate deaminase activity
JC773_20710	COG1386	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves
JC773_20715	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
JC773_20725	COG1547	Domain of unknown function (DUF309)
JC773_20735	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
JC773_20740	COG4086	secreted protein
JC773_20745	COG0561	phosphatase activity
JC773_20750	COG0697	spore germination
JC773_20765	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
JC773_20790	COG0733	neurotransmitter:sodium symporter activity
JC773_20800	COG2172	sigma factor antagonist activity
JC773_20810	COG1686	Belongs to the peptidase S11 family
JC773_20815	COG1725	Transcriptional regulator
JC773_20820	COG1131	(ABC) transporter
JC773_20840	COG1846	Transcriptional regulator
JC773_20855	COG0598	Magnesium transport protein CorA
JC773_20880	COG4974	Belongs to the 'phage' integrase family
JC773_20890	COG0735	belongs to the Fur family
JC773_20895	COG1300	Membrane
JC773_20915	COG0667	Aldo Keto reductase
JC773_20920	COG0656	L-ascorbic acid biosynthetic process
JC773_20925	COG0456	acetyltransferase
JC773_20925	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
JC773_20945	COG0596	Alpha beta hydrolase
JC773_20950	COG2056	Na+-H+ antiporter family
JC773_20955	COG1609	Transcriptional regulator
JC773_20960	COG0456	acetyltransferase
JC773_20965	COG1073	alpha beta
JC773_20980	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
JC773_20980	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
JC773_20985	COG0307	riboflavin synthase, alpha
JC773_20990	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
JC773_20990	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
JC773_21005	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
JC773_21010	COG4106	trans-aconitate 2-methyltransferase activity
JC773_21015	COG0596	Alpha beta hydrolase
JC773_21020	COG0156	8-amino-7-oxononanoate synthase activity
JC773_21030	COG0161	adenosylmethionine-8-amino-7-oxononanoate transaminase activity
JC773_21040	COG1757	Na H antiporter
JC773_21045	COG0737	Belongs to the 5'-nucleotidase family
JC773_21075	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
JC773_21085	COG0002	Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde
JC773_21095	COG0300	oxidoreductase activity
JC773_21100	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
JC773_21105	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
JC773_21110	COG1760	l-serine dehydratase
JC773_21115	COG1760	l-serine dehydratase
JC773_21125	COG1234	tRNA 3'-trailer cleavage
JC773_21145	COG2195	Cleaves the N-terminal amino acid of tripeptides
JC773_21150	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
JC773_21165	COG1376	ErfK ybiS ycfS ynhG family protein
JC773_21170	COG4129	membrane
JC773_21175	COG1126	abc transporter atp-binding protein
JC773_21180	COG0765	amino acid transport
JC773_21185	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
JC773_21200	COG2816	NAD+ diphosphatase activity
JC773_21205	COG0772	Belongs to the SEDS family
JC773_21210	COG0508	dehydrogenase complex catalyzes the overall conversion of
JC773_21215	COG0022	dehydrogenase e1 component
JC773_21220	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
JC773_21225	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
JC773_21230	COG3426	butyrate kinase activity
JC773_21240	COG0280	phosphate acetyltransferase
JC773_21245	COG3829	transcription factor binding
JC773_21245	COG3290	protein histidine kinase activity
JC773_21255	COG0584	glycerophosphoryl diester phosphodiesterase
JC773_21260	COG3093	addiction module antidote protein HigA
JC773_21275	COG1136	(ABC) transporter
JC773_21300	COG0745	RESPONSE REGULATOR receiver
JC773_21310	COG0750	zinc metalloprotease
JC773_21315	COG0497	DNA recombination
JC773_21325	COG1189	Ribosomal RNA methyltransferase RrmJ FtsJ
JC773_21330	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
JC773_21340	COG1722	exodeoxyribonuclease VII activity
JC773_21345	COG1570	exodeoxyribonuclease VII activity
JC773_21350	COG0190	Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate
JC773_21355	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
JC773_21360	COG1302	Protein conserved in bacteria
JC773_21365	COG0439	Biotin carboxylase
JC773_21370	COG0511	ligase activity, forming carbon-carbon bonds
JC773_21415	COG3854	ATPases associated with a variety of cellular activities
JC773_21435	COG0231	Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase
JC773_21440	COG0006	proline dipeptidase activity
JC773_21445	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
JC773_21455	COG3872	metal-dependent enzyme
JC773_21465	COG1321	iron dependent repressor
JC773_21480	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
JC773_21490	COG1609	Transcriptional regulator
JC773_21500	COG2076	Multidrug Resistance protein
JC773_21505	COG2076	Multidrug Resistance protein
JC773_21525	COG1131	(ABC) transporter
JC773_21530	COG1725	Transcriptional regulator
JC773_21545	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
JC773_21550	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
JC773_21555	COG0404	The glycine cleavage system catalyzes the degradation of glycine
JC773_21560	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
JC773_21590	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
JC773_21615	COG1459	type II secretion system
JC773_21645	COG4824	toxin secretion phage lysis holin
JC773_21750	COG1028	Short-chain dehydrogenase reductase Sdr
JC773_21775	COG0583	DNA-binding transcription factor activity
JC773_21790	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
JC773_21820	COG4974	Belongs to the 'phage' integrase family
JC773_21865	COG4166	transmembrane transport
JC773_21875	COG0457	Tetratricopeptide repeat
JC773_21910	COG1192	Involved in chromosome partitioning