locus-tag class description JC777_00005 PF01076 Plasmid recombination enzyme JC777_00010 PF12802 MarR family JC777_00030 PF00082 Subtilase family JC777_00035 PF02463 RecF/RecN/SMC N terminal domain JC777_00040 PF00589 Phage integrase family JC777_00065 PF00664 ABC transporter transmembrane region JC777_00065 PF00005 ABC transporter JC777_00160 PF02796 Helix-turn-helix domain of resolvase JC777_00160 PF00239 Resolvase, N terminal domain JC777_00165 PF01726 LexA DNA binding domain JC777_00165 PF00717 Peptidase S24-like JC777_00330 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system JC777_00440 PF05105 Bacteriophage holin family JC777_00445 PF08239 Bacterial SH3 domain JC777_00445 PF01520 N-acetylmuramoyl-L-alanine amidase JC777_00490 PF00717 Peptidase S24-like JC777_00490 PF01726 LexA DNA binding domain JC777_00505 PF00239 Resolvase, N terminal domain JC777_00505 PF02796 Helix-turn-helix domain of resolvase JC777_00520 PF10668 Phage terminase small subunit JC777_00525 PF04466 Phage terminase large subunit JC777_00525 PF17288 Terminase RNAseH like domain JC777_00540 PF14550 Putative phage serine protease XkdF JC777_00545 PF05065 Phage capsid family JC777_00705 PF17209 Hfq protein JC777_00825 PF00145 C-5 cytosine-specific DNA methylase JC777_00840 PF03838 Recombination protein U JC777_00850 PF08281 Sigma-70, region 4 JC777_00865 PF01555 DNA methylase JC777_01025 PF01381 Helix-turn-helix JC777_01035 PF00589 Phage integrase family JC777_01035 PF02899 Phage integrase, N-terminal SAM-like domain JC777_01040 PF01336 OB-fold nucleic acid binding domain JC777_01040 PF01966 HD domain JC777_01045 PF13514 AAA domain JC777_01050 PF00149 Calcineurin-like phosphoesterase JC777_01065 PF11121 Protein of unknown function (DUF2639) JC777_01075 PF01906 Putative heavy-metal-binding JC777_01080 PF02733 Dak1 domain JC777_01090 PF00232 Glycosyl hydrolase family 1 JC777_01095 PF00367 phosphotransferase system, EIIB JC777_01095 PF02378 Phosphotransferase system, EIIC JC777_01095 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JC777_01100 PF03123 CAT RNA binding domain JC777_01100 PF00874 PRD domain JC777_01115 PF12996 DUF based on E. rectale Gene description (DUF3880) JC777_01125 PF00483 Nucleotidyl transferase JC777_01130 PF16363 GDP-mannose 4,6 dehydratase JC777_01135 PF08421 Putative zinc binding domain JC777_01135 PF08484 C-methyltransferase C-terminal domain JC777_01140 PF16363 GDP-mannose 4,6 dehydratase JC777_01160 PF05853 beta-keto acid cleavage enzyme JC777_01165 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JC777_01165 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JC777_01175 PF00107 Zinc-binding dehydrogenase JC777_01175 PF08240 Alcohol dehydrogenase GroES-like domain JC777_01185 PF00474 Sodium:solute symporter family JC777_01195 PF00180 Isocitrate/isopropylmalate dehydrogenase JC777_01200 PF00171 Aldehyde dehydrogenase family JC777_01205 PF00848 Ring hydroxylating alpha subunit (catalytic domain) JC777_01205 PF00355 Rieske [2Fe-2S] domain JC777_01210 PF13188 PAS domain JC777_01210 PF02954 Bacterial regulatory protein, Fis family JC777_01210 PF00158 Sigma-54 interaction domain JC777_01215 PF02378 Phosphotransferase system, EIIC JC777_01220 PF14310 Fibronectin type III-like domain JC777_01220 PF00933 Glycosyl hydrolase family 3 N terminal domain JC777_01220 PF01915 Glycosyl hydrolase family 3 C-terminal domain JC777_01225 PF01229 Glycosyl hydrolases family 39 JC777_01230 PF06445 GyrI-like small molecule binding domain JC777_01230 PF13411 MerR HTH family regulatory protein JC777_01265 PF04556 DpnII restriction endonuclease JC777_01275 PF02086 D12 class N6 adenine-specific DNA methyltransferase JC777_01280 PF01555 DNA methylase JC777_01335 PF04634 Protein of unknown function, DUF600 JC777_01340 PF04740 LXG domain of WXG superfamily JC777_01370 PF01235 Sodium:alanine symporter family JC777_01380 PF03448 MgtE intracellular N domain JC777_01380 PF01769 Divalent cation transporter JC777_01380 PF00571 CBS domain JC777_01385 PF00395 S-layer homology domain JC777_01385 PF01520 N-acetylmuramoyl-L-alanine amidase JC777_01390 PF01520 N-acetylmuramoyl-L-alanine amidase JC777_01390 PF00395 S-layer homology domain JC777_01395 PF05343 M42 glutamyl aminopeptidase JC777_01405 PF00378 Enoyl-CoA hydratase/isomerase JC777_01420 PF03062 MBOAT, membrane-bound O-acyltransferase family JC777_01425 PF03062 MBOAT, membrane-bound O-acyltransferase family JC777_01435 PF00395 S-layer homology domain JC777_01450 PF14667 Polysaccharide biosynthesis C-terminal domain JC777_01450 PF01943 Polysaccharide biosynthesis protein JC777_01455 PF07516 SecA Wing and Scaffold domain JC777_01455 PF01043 SecA preprotein cross-linking domain JC777_01455 PF07517 SecA DEAD-like domain JC777_01475 PF00501 AMP-binding enzyme JC777_01475 PF13193 AMP-binding enzyme C-terminal domain JC777_01480 PF04055 Radical SAM superfamily JC777_01500 PF02245 Methylpurine-DNA glycosylase (MPG) JC777_01505 PF03306 Alpha-acetolactate decarboxylase JC777_01510 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JC777_01510 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JC777_01510 PF00205 Thiamine pyrophosphate enzyme, central domain JC777_01550 PF00072 Response regulator receiver domain JC777_01550 PF00196 Bacterial regulatory proteins, luxR family JC777_01555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC777_01555 PF07730 Histidine kinase JC777_01560 PF06133 Control of competence regulator ComK, YlbF/YmcA JC777_01565 PF04286 Protein of unknown function (DUF445) JC777_01570 PF14398 YheC/D like ATP-grasp JC777_01580 PF00269 Small, acid-soluble spore proteins, alpha/beta type JC777_01585 PF00005 ABC transporter JC777_01590 PF00528 Binding-protein-dependent transport system inner membrane component JC777_01595 PF00497 Bacterial extracellular solute-binding proteins, family 3 JC777_01600 PF00664 ABC transporter transmembrane region JC777_01600 PF00005 ABC transporter JC777_01605 PF00664 ABC transporter transmembrane region JC777_01605 PF00005 ABC transporter JC777_01610 PF00171 Aldehyde dehydrogenase family JC777_01615 PF13520 Amino acid permease JC777_01630 PF01037 Lrp/AsnC ligand binding domain JC777_01635 PF00892 EamA-like transporter family JC777_01645 PF02378 Phosphotransferase system, EIIC JC777_01645 PF00367 phosphotransferase system, EIIB JC777_01650 PF13580 SIS domain JC777_01660 PF01380 SIS domain JC777_01660 PF01418 Helix-turn-helix domain, rpiR family JC777_01665 PF00999 Sodium/hydrogen exchanger family JC777_01710 PF11007 Spore coat associated protein JA (CotJA) JC777_01715 PF12652 CotJB protein JC777_01720 PF05067 Manganese containing catalase JC777_01725 PF05525 Branched-chain amino acid transport protein JC777_01730 PF09529 Integral membrane protein (intg_mem_TP0381) JC777_01740 PF00005 ABC transporter JC777_01745 PF02687 FtsX-like permease family JC777_01745 PF12704 MacB-like periplasmic core domain JC777_01755 PF07690 Major Facilitator Superfamily JC777_01760 PF02690 Na+/Pi-cotransporter JC777_01765 PF03816 Cell envelope-related transcriptional attenuator domain JC777_01785 PF04293 SpoVR like protein JC777_01795 PF00881 Nitroreductase family JC777_01800 PF03323 Bacillus/Clostridium GerA spore germination protein JC777_01810 PF03845 Spore germination protein JC777_01820 PF14148 YhdB-like protein JC777_01825 PF03816 Cell envelope-related transcriptional attenuator domain JC777_01830 PF02600 Disulfide bond formation protein DsbB JC777_01835 PF00085 Thioredoxin JC777_01850 PF03734 L,D-transpeptidase catalytic domain JC777_01860 PF00860 Permease family JC777_01870 PF01047 MarR family JC777_01875 PF07690 Major Facilitator Superfamily JC777_01880 PF02702 Osmosensitive K+ channel His kinase sensor domain JC777_01885 PF02669 K+-transporting ATPase, c chain JC777_01895 PF03814 Potassium-transporting ATPase A subunit JC777_01920 PF08543 Phosphomethylpyrimidine kinase JC777_01925 PF00899 ThiF family JC777_01930 PF05690 Thiazole biosynthesis protein ThiG JC777_01935 PF02597 ThiS family JC777_01940 PF01266 FAD dependent oxidoreductase JC777_01945 PF02581 Thiamine monophosphate synthase JC777_01950 PF09084 NMT1/THI5 like JC777_01955 PF00528 Binding-protein-dependent transport system inner membrane component JC777_01960 PF00005 ABC transporter JC777_01965 PF03070 TENA/THI-4/PQQC family JC777_01980 PF00246 Zinc carboxypeptidase JC777_01980 PF08239 Bacterial SH3 domain JC777_01995 PF00571 CBS domain JC777_02075 PF05698 Bacterial trigger factor protein (TF) C-terminus JC777_02075 PF05697 Bacterial trigger factor protein (TF) JC777_02115 PF00873 AcrB/AcrD/AcrF family JC777_02120 PF00528 Binding-protein-dependent transport system inner membrane component JC777_02125 PF00528 Binding-protein-dependent transport system inner membrane component JC777_02130 PF12849 PBP superfamily domain JC777_02135 PF07670 Nucleoside recognition JC777_02135 PF02421 Ferrous iron transport protein B JC777_02135 PF17910 FeoB cytosolic helical domain JC777_02135 PF07664 Ferrous iron transport protein B C terminus JC777_02135 PF04023 FeoA domain JC777_02140 PF17910 FeoB cytosolic helical domain JC777_02140 PF07664 Ferrous iron transport protein B C terminus JC777_02140 PF02421 Ferrous iron transport protein B JC777_02140 PF07670 Nucleoside recognition JC777_02145 PF07664 Ferrous iron transport protein B C terminus JC777_02145 PF02421 Ferrous iron transport protein B JC777_02145 PF17910 FeoB cytosolic helical domain JC777_02145 PF07670 Nucleoside recognition JC777_02155 PF05504 Spore germination B3/ GerAC like, C-terminal JC777_02160 PF03845 Spore germination protein JC777_02165 PF03323 Bacillus/Clostridium GerA spore germination protein JC777_02170 PF00474 Sodium:solute symporter family JC777_02180 PF07687 Peptidase dimerisation domain JC777_02180 PF01546 Peptidase family M20/M25/M40 JC777_02185 PF13529 Peptidase_C39 like family JC777_02190 PF00324 Amino acid permease JC777_02195 PF02790 Cytochrome C oxidase subunit II, transmembrane domain JC777_02200 PF00115 Cytochrome C and Quinol oxidase polypeptide I JC777_02205 PF00510 Cytochrome c oxidase subunit III JC777_02215 PF02080 TrkA-C domain JC777_02215 PF00999 Sodium/hydrogen exchanger family JC777_02215 PF02254 TrkA-N domain JC777_02225 PF13673 Acetyltransferase (GNAT) domain JC777_02230 PF00324 Amino acid permease JC777_02245 PF05525 Branched-chain amino acid transport protein JC777_02250 PF00854 POT family JC777_02260 PF04203 Sortase domain JC777_02275 PF01381 Helix-turn-helix JC777_02280 PF06725 3D domain JC777_02280 PF01476 LysM domain JC777_02285 PF02743 Cache domain JC777_02285 PF00672 HAMP domain JC777_02285 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JC777_02300 PF04030 D-arabinono-1,4-lactone oxidase JC777_02300 PF01565 FAD binding domain JC777_02310 PF03372 Endonuclease/Exonuclease/phosphatase family JC777_02315 PF00882 Zinc dependent phospholipase C JC777_02325 PF00923 Transaldolase/Fructose-6-phosphate aldolase JC777_02330 PF13407 Periplasmic binding protein domain JC777_02335 PF02653 Branched-chain amino acid transport system / permease component JC777_02340 PF00005 ABC transporter JC777_02345 PF05025 RbsD / FucU transport protein family JC777_02350 PF00294 pfkB family carbohydrate kinase JC777_02355 PF00356 Bacterial regulatory proteins, lacI family JC777_02360 PF07690 Major Facilitator Superfamily JC777_02365 PF01047 MarR family JC777_02370 PF07690 Major Facilitator Superfamily JC777_02375 PF00005 ABC transporter JC777_02375 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JC777_02380 PF00005 ABC transporter JC777_02380 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JC777_02385 PF00528 Binding-protein-dependent transport system inner membrane component JC777_02390 PF00528 Binding-protein-dependent transport system inner membrane component JC777_02395 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JC777_02405 PF00582 Universal stress protein family JC777_02410 PF01740 STAS domain JC777_02410 PF00916 Sulfate permease family JC777_02420 PF00486 Transcriptional regulatory protein, C terminal JC777_02420 PF00072 Response regulator receiver domain JC777_02425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC777_02425 PF18698 Histidine kinase sensor domain JC777_02425 PF00672 HAMP domain JC777_02425 PF00512 His Kinase A (phospho-acceptor) domain JC777_02425 PF00989 PAS fold JC777_02435 PF00324 Amino acid permease JC777_02440 PF00528 Binding-protein-dependent transport system inner membrane component JC777_02445 PF00528 Binding-protein-dependent transport system inner membrane component JC777_02450 PF00497 Bacterial extracellular solute-binding proteins, family 3 JC777_02455 PF00005 ABC transporter JC777_02460 PF01235 Sodium:alanine symporter family JC777_02465 PF01636 Phosphotransferase enzyme family JC777_02470 PF13520 Amino acid permease JC777_02475 PF07728 AAA domain (dynein-related subfamily) JC777_02480 PF00092 von Willebrand factor type A domain JC777_02485 PF01370 NAD dependent epimerase/dehydratase family JC777_02490 PF00155 Aminotransferase class I and II JC777_02495 PF00854 POT family JC777_02500 PF08141 Small acid-soluble spore protein H family JC777_02505 PF01022 Bacterial regulatory protein, arsR family JC777_02510 PF02652 L-lactate permease JC777_02515 PF10415 Fumarase C C-terminus JC777_02515 PF00206 Lyase JC777_02520 PF01595 Cyclin M transmembrane N-terminal domain JC777_02520 PF00571 CBS domain JC777_02520 PF03471 Transporter associated domain JC777_02525 PF03816 Cell envelope-related transcriptional attenuator domain JC777_02530 PF04294 VanW like protein JC777_02545 PF00403 Heavy-metal-associated domain JC777_02550 PF00403 Heavy-metal-associated domain JC777_02565 PF07504 Fungalysin/Thermolysin Propeptide Motif JC777_02565 PF03413 Peptidase propeptide and YPEB domain JC777_02565 PF01447 Thermolysin metallopeptidase, catalytic domain JC777_02565 PF02868 Thermolysin metallopeptidase, alpha-helical domain JC777_02580 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family JC777_02580 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain JC777_02580 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain JC777_02585 PF00403 Heavy-metal-associated domain JC777_02590 PF01022 Bacterial regulatory protein, arsR family JC777_02600 PF13520 Amino acid permease JC777_02605 PF05222 Alanine dehydrogenase/PNT, N-terminal domain JC777_02605 PF01262 Alanine dehydrogenase/PNT, C-terminal domain JC777_02610 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JC777_02610 PF12729 Four helix bundle sensory module for signal transduction JC777_02610 PF00672 HAMP domain JC777_02620 PF07849 Protein of unknown function (DUF1641) JC777_02625 PF00384 Molybdopterin oxidoreductase JC777_02625 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region JC777_02625 PF01568 Molydopterin dinucleotide binding domain JC777_02625 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JC777_02625 PF00037 4Fe-4S binding domain JC777_02630 PF02634 FdhD/NarQ family JC777_02635 PF00486 Transcriptional regulatory protein, C terminal JC777_02635 PF00072 Response regulator receiver domain JC777_02640 PF00989 PAS fold JC777_02640 PF00512 His Kinase A (phospho-acceptor) domain JC777_02640 PF18698 Histidine kinase sensor domain JC777_02640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC777_02640 PF00672 HAMP domain JC777_02655 PF00390 Malic enzyme, N-terminal domain JC777_02655 PF03949 Malic enzyme, NAD binding domain JC777_02660 PF03390 2-hydroxycarboxylate transporter family JC777_02665 PF00072 Response regulator receiver domain JC777_02670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC777_02670 PF00989 PAS fold JC777_02670 PF17203 Single cache domain 3 JC777_02670 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain JC777_02675 PF02743 Cache domain JC777_02675 PF00672 HAMP domain JC777_02675 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JC777_02680 PF13529 Peptidase_C39 like family JC777_02710 PF00672 HAMP domain JC777_02710 PF02743 Cache domain JC777_02710 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JC777_02715 PF15975 Flotillin JC777_02715 PF01145 SPFH domain / Band 7 family JC777_02725 PF01752 Collagenase JC777_02725 PF08453 Peptidase family M9 N-terminal JC777_02725 PF18496 Collagenase G catalytic helper subdomain JC777_02730 PF02028 BCCT, betaine/carnitine/choline family transporter JC777_02735 PF00395 S-layer homology domain JC777_02760 PF01979 Amidohydrolase family JC777_02765 PF02272 DHHA1 domain JC777_02765 PF01411 tRNA synthetases class II (A) JC777_02765 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JC777_02775 PF01810 LysE type translocator JC777_02790 PF04285 Protein of unknown function (DUF444) JC777_02795 PF06798 PrkA serine protein kinase C-terminal domain JC777_02795 PF08298 PrkA AAA domain JC777_02800 PF00588 SpoU rRNA Methylase family JC777_02805 PF12671 Putative amidase domain JC777_02810 PF08331 Domain of unknown function (DUF1730) JC777_02820 PF13462 Thioredoxin JC777_02825 PF00905 Penicillin binding protein transpeptidase domain JC777_02825 PF00912 Transglycosylase JC777_02830 PF01709 Transcriptional regulator JC777_02850 PF04740 LXG domain of WXG superfamily JC777_02850 PF14436 Bacterial EndoU nuclease JC777_02855 PF18801 response regulator aspartate phosphatase H, N terminal JC777_02950 PF11023 Zinc-ribbon containing domain JC777_02955 PF01475 Ferric uptake regulator family JC777_02960 PF00578 AhpC/TSA family JC777_02965 PF07885 Ion channel JC777_02980 PF00005 ABC transporter JC777_02985 PF00202 Aminotransferase class-III JC777_02990 PF01645 Conserved region in glutamate synthase JC777_02990 PF00310 Glutamine amidotransferases class-II JC777_02990 PF01493 GXGXG motif JC777_02990 PF04898 Glutamate synthase central domain JC777_02995 PF06081 Aromatic acid exporter family member 1 JC777_03000 PF00005 ABC transporter JC777_03000 PF00664 ABC transporter transmembrane region JC777_03005 PF04167 Protein of unknown function (DUF402) JC777_03015 PF04259 Small, acid-soluble spore protein, gamma-type JC777_03030 PF14815 NUDIX domain JC777_03030 PF00730 HhH-GPD superfamily base excision DNA repair protein JC777_03035 PF04307 LexA-binding, inner membrane-associated putative hydrolase JC777_03040 PF14043 WVELL protein JC777_03045 PF08176 Small acid-soluble spore protein K family JC777_03055 PF08838 Protein of unknown function (DUF1811) JC777_03060 PF02631 RecX family JC777_03065 PF01979 Amidohydrolase family JC777_03080 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase JC777_03080 PF04101 Glycosyltransferase family 28 C-terminal domain JC777_03085 PF04055 Radical SAM superfamily JC777_03090 PF02901 Pyruvate formate lyase-like JC777_03090 PF01228 Glycine radical JC777_03095 PF01370 NAD dependent epimerase/dehydratase family JC777_03095 PF02911 Formyl transferase, C-terminal domain JC777_03095 PF00551 Formyl transferase JC777_03100 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain JC777_03100 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain JC777_03100 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain JC777_03105 PF00144 Beta-lactamase JC777_03110 PF02378 Phosphotransferase system, EIIC JC777_03110 PF00367 phosphotransferase system, EIIB JC777_03115 PF04960 Glutaminase JC777_03140 PF01416 tRNA pseudouridine synthase JC777_03145 PF01938 TRAM domain JC777_03145 PF05958 tRNA (Uracil-5-)-methyltransferase JC777_03150 PF00730 HhH-GPD superfamily base excision DNA repair protein JC777_03155 PF01522 Polysaccharide deacetylase JC777_03160 PF05681 Fumarate hydratase (Fumerase) JC777_03160 PF05683 Fumarase C-terminus JC777_03170 PF04055 Radical SAM superfamily JC777_03170 PF08756 YfkB-like domain JC777_03175 PF14167 YfkD-like protein JC777_03180 PF01699 Sodium/calcium exchanger protein JC777_03195 PF09335 SNARE associated Golgi protein JC777_03205 PF10502 Signal peptidase, peptidase S26 JC777_03215 PF00892 EamA-like transporter family JC777_03225 PF03631 Virulence factor BrkB JC777_03235 PF01451 Low molecular weight phosphotyrosine protein phosphatase JC777_03240 PF06569 Protein of unknown function (DUF1128) JC777_03250 PF05816 Toxic anion resistance protein (TelA) JC777_03255 PF14266 Putative component of 'biosynthetic module' JC777_03260 PF03741 Integral membrane protein TerC family JC777_03265 PF02342 TerD domain JC777_03270 PF02342 TerD domain JC777_03275 PF02342 TerD domain JC777_03280 PF00480 ROK family JC777_03285 PF03129 Anticodon binding domain JC777_03285 PF09180 Prolyl-tRNA synthetase, C-terminal JC777_03285 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JC777_03300 PF11700 Vacuole effluxer Atg22 like JC777_03310 PF08360 QacR-like protein, C-terminal region JC777_03310 PF00440 Bacterial regulatory proteins, tetR family JC777_03320 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase JC777_03340 PF00041 Fibronectin type III domain JC777_03340 PF00704 Glycosyl hydrolases family 18 JC777_03345 PF00005 ABC transporter JC777_03355 PF00528 Binding-protein-dependent transport system inner membrane component JC777_03360 PF01910 Thiamine-binding protein JC777_03365 PF13193 AMP-binding enzyme C-terminal domain JC777_03365 PF00668 Condensation domain JC777_03365 PF00550 Phosphopantetheine attachment site JC777_03365 PF00975 Thioesterase domain JC777_03365 PF00501 AMP-binding enzyme JC777_03370 PF00672 HAMP domain JC777_03370 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JC777_03375 PF03605 Anaerobic c4-dicarboxylate membrane transporter JC777_03385 PF02581 Thiamine monophosphate synthase JC777_03390 PF02110 Hydroxyethylthiazole kinase family JC777_03395 PF01497 Periplasmic binding protein JC777_03400 PF00005 ABC transporter JC777_03405 PF01032 FecCD transport family JC777_03410 PF01032 FecCD transport family JC777_03415 PF01751 Toprim domain JC777_03415 PF01131 DNA topoisomerase JC777_03420 PF01061 ABC-2 type transporter JC777_03425 PF03372 Endonuclease/Exonuclease/phosphatase family JC777_03430 PF02378 Phosphotransferase system, EIIC JC777_03430 PF00367 phosphotransferase system, EIIB JC777_03430 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JC777_03435 PF16657 Maltogenic Amylase, C-terminal domain JC777_03435 PF00128 Alpha amylase, catalytic domain JC777_03445 PF13545 Crp-like helix-turn-helix domain JC777_03445 PF00027 Cyclic nucleotide-binding domain JC777_03450 PF00696 Amino acid kinase family JC777_03455 PF13520 Amino acid permease JC777_03460 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JC777_03460 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JC777_03470 PF01316 Arginine repressor, DNA binding domain JC777_03470 PF02863 Arginine repressor, C-terminal domain JC777_03480 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JC777_03480 PF12729 Four helix bundle sensory module for signal transduction JC777_03480 PF00672 HAMP domain JC777_03485 PF00005 ABC transporter JC777_03490 PF00497 Bacterial extracellular solute-binding proteins, family 3 JC777_03495 PF00528 Binding-protein-dependent transport system inner membrane component JC777_03505 PF01266 FAD dependent oxidoreductase JC777_03505 PF00355 Rieske [2Fe-2S] domain JC777_03510 PF07690 Major Facilitator Superfamily JC777_03545 PF00512 His Kinase A (phospho-acceptor) domain JC777_03545 PF13426 PAS domain JC777_03545 PF13188 PAS domain JC777_03545 PF00989 PAS fold JC777_03545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC777_03550 PF12728 Helix-turn-helix domain JC777_03560 PF07992 Pyridine nucleotide-disulphide oxidoreductase JC777_03565 PF01497 Periplasmic binding protein JC777_03570 PF01032 FecCD transport family JC777_03575 PF01032 FecCD transport family JC777_03585 PF01636 Phosphotransferase enzyme family JC777_03590 PF00578 AhpC/TSA family JC777_03595 PF07992 Pyridine nucleotide-disulphide oxidoreductase JC777_03595 PF13192 Thioredoxin domain JC777_03605 PF01207 Dihydrouridine synthase (Dus) JC777_03610 PF05958 tRNA (Uracil-5-)-methyltransferase JC777_03610 PF02475 Met-10+ like-protein JC777_03610 PF01938 TRAM domain JC777_03615 PF07670 Nucleoside recognition JC777_03615 PF01773 Na+ dependent nucleoside transporter N-terminus JC777_03615 PF07662 Na+ dependent nucleoside transporter C-terminus JC777_03625 PF02073 Thermophilic metalloprotease (M29) JC777_03630 PF00893 Small Multidrug Resistance protein JC777_03635 PF00171 Aldehyde dehydrogenase family JC777_03640 PF13520 Amino acid permease JC777_03645 PF00158 Sigma-54 interaction domain JC777_03650 PF00202 Aminotransferase class-III JC777_03655 PF13419 Haloacid dehalogenase-like hydrolase JC777_03665 PF00781 Diacylglycerol kinase catalytic domain JC777_03670 PF02637 GatB domain JC777_03670 PF02934 GatB/GatE catalytic domain JC777_03675 PF01425 Amidase JC777_03680 PF02686 Glu-tRNAGln amidotransferase C subunit JC777_03685 PF05360 yiaA/B two helix domain JC777_03700 PF03180 NLPA lipoprotein JC777_03705 PF00528 Binding-protein-dependent transport system inner membrane component JC777_03710 PF09383 NIL domain JC777_03710 PF00005 ABC transporter JC777_03715 PF00857 Isochorismatase family JC777_03720 PF00171 Aldehyde dehydrogenase family JC777_03725 PF01925 Sulfite exporter TauE/SafE JC777_03730 PF07537 CamS sex pheromone cAM373 precursor JC777_03735 PF00533 BRCA1 C Terminus (BRCT) domain JC777_03735 PF01653 NAD-dependent DNA ligase adenylation domain JC777_03735 PF03119 NAD-dependent DNA ligase C4 zinc finger domain JC777_03735 PF03120 NAD-dependent DNA ligase OB-fold domain JC777_03735 PF12826 Helix-hairpin-helix motif JC777_03740 PF00580 UvrD/REP helicase N-terminal domain JC777_03740 PF13361 UvrD-like helicase C-terminal domain JC777_03745 PF01884 PcrB family JC777_03765 PF03466 LysR substrate binding domain JC777_03765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JC777_03775 PF02844 Phosphoribosylglycinamide synthetase, N domain JC777_03775 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain JC777_03775 PF02843 Phosphoribosylglycinamide synthetase, C domain JC777_03780 PF01808 AICARFT/IMPCHase bienzyme JC777_03780 PF02142 MGS-like domain JC777_03785 PF00551 Formyl transferase JC777_03790 PF00586 AIR synthase related protein, N-terminal domain JC777_03790 PF02769 AIR synthase related protein, C-terminal domain JC777_03795 PF00156 Phosphoribosyl transferase domain JC777_03800 PF00586 AIR synthase related protein, N-terminal domain JC777_03800 PF02769 AIR synthase related protein, C-terminal domain JC777_03800 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain JC777_03810 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase JC777_03815 PF01259 SAICAR synthetase JC777_03820 PF10397 Adenylosuccinate lyase C-terminus JC777_03820 PF00206 Lyase JC777_03825 PF02222 ATP-grasp domain JC777_03825 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain JC777_03830 PF00731 AIR carboxylase JC777_03850 PF00892 EamA-like transporter family JC777_03870 PF00072 Response regulator receiver domain JC777_03870 PF00486 Transcriptional regulatory protein, C terminal JC777_03875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC777_03875 PF00512 His Kinase A (phospho-acceptor) domain JC777_03880 PF00005 ABC transporter JC777_03940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC777_03940 PF00512 His Kinase A (phospho-acceptor) domain JC777_03940 PF00989 PAS fold JC777_03940 PF16736 Single Cache-like JC777_03945 PF00072 Response regulator receiver domain JC777_03945 PF00486 Transcriptional regulatory protein, C terminal JC777_03950 PF00860 Permease family JC777_03955 PF00117 Glutamine amidotransferase class-I JC777_03955 PF00958 GMP synthase C terminal domain JC777_03955 PF02540 NAD synthase JC777_03960 PF00118 TCP-1/cpn60 chaperonin family JC777_03965 PF00166 Chaperonin 10 Kd subunit JC777_03970 PF02517 CPBP intramembrane metalloprotease JC777_03980 PF02629 CoA binding domain JC777_03980 PF06971 Putative DNA-binding protein N-terminus JC777_03985 PF16326 ABC transporter C-terminal domain JC777_03985 PF12848 ABC transporter JC777_03985 PF00005 ABC transporter JC777_03990 PF00814 Glycoprotease family JC777_03995 PF00583 Acetyltransferase (GNAT) family JC777_04000 PF00814 Glycoprotease family JC777_04005 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE JC777_04055 PF05698 Bacterial trigger factor protein (TF) C-terminus JC777_04055 PF05697 Bacterial trigger factor protein (TF) JC777_04095 PF10263 SprT-like family JC777_04105 PF17674 HHH domain JC777_04105 PF00575 S1 RNA binding domain JC777_04105 PF09371 Tex-like protein N-terminal domain JC777_04105 PF16921 Tex protein YqgF-like domain JC777_04110 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system JC777_04115 PF01402 Ribbon-helix-helix protein, copG family JC777_04120 PF01168 Alanine racemase, N-terminal domain JC777_04120 PF00842 Alanine racemase, C-terminal domain JC777_04130 PF01648 4'-phosphopantetheinyl transferase superfamily JC777_04135 PF01694 Rhomboid family JC777_04140 PF00270 DEAD/DEAH box helicase JC777_04140 PF00271 Helicase conserved C-terminal domain JC777_04145 PF01225 Mur ligase family, catalytic domain JC777_04145 PF02875 Mur ligase family, glutamate ligase domain JC777_04145 PF08245 Mur ligase middle domain JC777_04150 PF07478 D-ala D-ala ligase C-terminus JC777_04150 PF01820 D-ala D-ala ligase N-terminus JC777_04155 PF07690 Major Facilitator Superfamily JC777_04165 PF01557 Fumarylacetoacetate (FAA) hydrolase family JC777_04170 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JC777_04190 PF00005 ABC transporter JC777_04190 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JC777_04195 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JC777_04195 PF00005 ABC transporter JC777_04200 PF12911 N-terminal TM domain of oligopeptide transport permease C JC777_04200 PF00528 Binding-protein-dependent transport system inner membrane component JC777_04205 PF00528 Binding-protein-dependent transport system inner membrane component JC777_04210 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JC777_04230 PF00005 ABC transporter JC777_04235 PF00196 Bacterial regulatory proteins, luxR family JC777_04235 PF00072 Response regulator receiver domain JC777_04240 PF07730 Histidine kinase JC777_04265 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain JC777_04265 PF18267 Rubredoxin NAD+ reductase C-terminal domain JC777_04265 PF07992 Pyridine nucleotide-disulphide oxidoreductase JC777_04265 PF01077 Nitrite and sulphite reductase 4Fe-4S domain JC777_04265 PF04324 BFD-like [2Fe-2S] binding domain JC777_04270 PF00355 Rieske [2Fe-2S] domain JC777_04275 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JC777_04280 PF01903 CbiX JC777_04285 PF10414 Sirohaem synthase dimerisation region JC777_04285 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JC777_04285 PF14824 Sirohaem biosynthesis protein central JC777_04290 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JC777_04290 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JC777_04295 PF01553 Acyltransferase JC777_04300 PF12727 PBP superfamily domain JC777_04300 PF12728 Helix-turn-helix domain JC777_04310 PF00528 Binding-protein-dependent transport system inner membrane component JC777_04315 PF06800 Sugar transport protein JC777_04320 PF03807 NADP oxidoreductase coenzyme F420-dependent JC777_04320 PF14748 Pyrroline-5-carboxylate reductase dimerisation JC777_04325 PF00248 Aldo/keto reductase family JC777_04335 PF00440 Bacterial regulatory proteins, tetR family JC777_04345 PF12833 Helix-turn-helix domain JC777_04355 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JC777_04360 PF00005 ABC transporter JC777_04360 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JC777_04365 PF00005 ABC transporter JC777_04365 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JC777_04370 PF00528 Binding-protein-dependent transport system inner membrane component JC777_04370 PF12911 N-terminal TM domain of oligopeptide transport permease C JC777_04375 PF00528 Binding-protein-dependent transport system inner membrane component JC777_04385 PF07690 Major Facilitator Superfamily JC777_04395 PF12323 Helix-turn-helix domain JC777_04395 PF07282 Putative transposase DNA-binding domain JC777_04395 PF01385 Probable transposase JC777_04415 PF03313 Serine dehydratase alpha chain JC777_04420 PF03313 Serine dehydratase alpha chain JC777_04425 PF00581 Rhodanese-like domain JC777_04425 PF00899 ThiF family JC777_04430 PF07478 D-ala D-ala ligase C-terminus JC777_04430 PF01820 D-ala D-ala ligase N-terminus JC777_04490 PF02517 CPBP intramembrane metalloprotease JC777_04510 PF18801 response regulator aspartate phosphatase H, N terminal JC777_04575 PF01380 SIS domain JC777_04580 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JC777_04580 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JC777_04580 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JC777_04580 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JC777_04590 PF02457 DisA bacterial checkpoint controller nucleotide-binding JC777_04595 PF00491 Arginase family JC777_04600 PF02595 Glycerate kinase family JC777_04670 PF01522 Polysaccharide deacetylase JC777_04675 PF14089 KinB-signalling pathway activation in sporulation JC777_04680 PF17898 Spore germination GerD central core domain JC777_04685 PF10609 NUBPL iron-transfer P-loop NTPase JC777_04690 PF01520 N-acetylmuramoyl-L-alanine amidase JC777_04700 PF00380 Ribosomal protein S9/S16 JC777_04705 PF00572 Ribosomal protein L13 JC777_04710 PF01416 tRNA pseudouridine synthase JC777_04715 PF02361 Cobalt transport protein JC777_04720 PF00005 ABC transporter JC777_04725 PF00005 ABC transporter JC777_04730 PF01196 Ribosomal protein L17 JC777_04735 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain JC777_04735 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain JC777_04735 PF01000 RNA polymerase Rpb3/RpoA insert domain JC777_04740 PF00411 Ribosomal protein S11 JC777_04745 PF00416 Ribosomal protein S13/S18 JC777_04750 PF00444 Ribosomal protein L36 JC777_04755 PF01176 Translation initiation factor 1A / IF-1 JC777_04760 PF00557 Metallopeptidase family M24 JC777_04765 PF05191 Adenylate kinase, active site lid JC777_04770 PF00344 SecY translocase JC777_04775 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A JC777_04780 PF00327 Ribosomal protein L30p/L7e JC777_04785 PF03719 Ribosomal protein S5, C-terminal domain JC777_04785 PF00333 Ribosomal protein S5, N-terminal domain JC777_04790 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast JC777_04795 PF00347 Ribosomal protein L6 JC777_04800 PF00410 Ribosomal protein S8 JC777_04805 PF00253 Ribosomal protein S14p/S29e JC777_04810 PF00281 Ribosomal protein L5 JC777_04810 PF00673 ribosomal L5P family C-terminus JC777_04815 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 JC777_04815 PF00467 KOW motif JC777_04820 PF00238 Ribosomal protein L14p/L23e JC777_04825 PF00366 Ribosomal protein S17 JC777_04830 PF00831 Ribosomal L29 protein JC777_04835 PF00252 Ribosomal protein L16p/L10e JC777_04840 PF07650 KH domain JC777_04840 PF00189 Ribosomal protein S3, C-terminal domain JC777_04845 PF00237 Ribosomal protein L22p/L17e JC777_04850 PF00203 Ribosomal protein S19 JC777_04855 PF00181 Ribosomal Proteins L2, RNA binding domain JC777_04855 PF03947 Ribosomal Proteins L2, C-terminal domain JC777_04860 PF00276 Ribosomal protein L23 JC777_04865 PF00573 Ribosomal protein L4/L1 family JC777_04870 PF00297 Ribosomal protein L3 JC777_04875 PF00338 Ribosomal protein S10p/S20e JC777_04880 PF00009 Elongation factor Tu GTP binding domain JC777_04880 PF03144 Elongation factor Tu domain 2 JC777_04880 PF03143 Elongation factor Tu C-terminal domain JC777_04885 PF03144 Elongation factor Tu domain 2 JC777_04885 PF00009 Elongation factor Tu GTP binding domain JC777_04885 PF03764 Elongation factor G, domain IV JC777_04885 PF14492 Elongation Factor G, domain II JC777_04885 PF00679 Elongation factor G C-terminus JC777_04890 PF00177 Ribosomal protein S7p/S5e JC777_04895 PF00164 Ribosomal protein S12/S23 JC777_04900 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family JC777_04905 PF00623 RNA polymerase Rpb1, domain 2 JC777_04905 PF04998 RNA polymerase Rpb1, domain 5 JC777_04905 PF05000 RNA polymerase Rpb1, domain 4 JC777_04905 PF04997 RNA polymerase Rpb1, domain 1 JC777_04905 PF04983 RNA polymerase Rpb1, domain 3 JC777_04910 PF04563 RNA polymerase beta subunit JC777_04910 PF04565 RNA polymerase Rpb2, domain 3 JC777_04910 PF00562 RNA polymerase Rpb2, domain 6 JC777_04910 PF04560 RNA polymerase Rpb2, domain 7 JC777_04910 PF10385 RNA polymerase beta subunit external 1 domain JC777_04910 PF04561 RNA polymerase Rpb2, domain 2 JC777_04915 PF05175 Methyltransferase small domain JC777_04920 PF00542 Ribosomal protein L7/L12 C-terminal domain JC777_04920 PF16320 Ribosomal protein L7/L12 dimerisation domain JC777_04925 PF00466 Ribosomal protein L10 JC777_04930 PF00687 Ribosomal protein L1p/L10e family JC777_04935 PF00298 Ribosomal protein L11, RNA binding domain JC777_04935 PF03946 Ribosomal protein L11, N-terminal domain JC777_04940 PF00467 KOW motif JC777_04940 PF02357 Transcription termination factor nusG JC777_04950 PF00471 Ribosomal protein L33 JC777_04955 PF04542 Sigma-70 region 2 JC777_04955 PF08281 Sigma-70, region 4 JC777_04960 PF05991 YacP-like NYN domain JC777_04965 PF08032 RNA 2'-O ribose methyltransferase substrate binding JC777_04965 PF00588 SpoU rRNA Methylase family JC777_04970 PF00636 Ribonuclease III domain JC777_04975 PF01406 tRNA synthetases class I (C) catalytic domain JC777_04975 PF09190 DALR domain JC777_04980 PF06426 Serine acetyltransferase, N-terminal JC777_04980 PF00132 Bacterial transferase hexapeptide (six repeats) JC777_04985 PF00749 tRNA synthetases class I (E and Q), catalytic domain JC777_04990 PF02542 YgbB family JC777_04995 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase JC777_05005 PF02457 DisA bacterial checkpoint controller nucleotide-binding JC777_05005 PF10635 DisA bacterial checkpoint controller linker region JC777_05010 PF18073 Rubredoxin metal binding domain JC777_05015 PF07724 AAA domain (Cdc48 subfamily) JC777_05015 PF17871 AAA lid domain JC777_05015 PF02861 Clp amino terminal domain, pathogenicity island component JC777_05015 PF10431 C-terminal, D2-small domain, of ClpB protein JC777_05015 PF00004 ATPase family associated with various cellular activities (AAA) JC777_05020 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain JC777_05025 PF02151 UvrB/uvrC motif JC777_05030 PF05848 CtsR N-terminal HTH domain JC777_05030 PF17727 CtsR C-terminal dimerization domain JC777_05075 PF05697 Bacterial trigger factor protein (TF) JC777_05075 PF05698 Bacterial trigger factor protein (TF) C-terminus JC777_05110 PF00152 tRNA synthetases class II (D, K and N) JC777_05110 PF01336 OB-fold nucleic acid binding domain JC777_05115 PF01207 Dihydrouridine synthase (Dus) JC777_05120 PF01381 Helix-turn-helix JC777_05125 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) JC777_05130 PF02152 Dihydroneopterin aldolase JC777_05135 PF00809 Pterin binding enzyme JC777_05140 PF01063 Amino-transferase class IV JC777_05145 PF00117 Glutamine amidotransferase class-I JC777_05150 PF04715 Anthranilate synthase component I, N terminal region JC777_05150 PF00425 chorismate binding enzyme JC777_05155 PF00291 Pyridoxal-phosphate dependent enzyme JC777_05160 PF01430 Hsp33 protein JC777_05165 PF03309 Type III pantothenate kinase JC777_05170 PF01434 Peptidase family M41 JC777_05170 PF06480 FtsH Extracellular JC777_05170 PF17862 AAA+ lid domain JC777_05170 PF00004 ATPase family associated with various cellular activities (AAA) JC777_05175 PF00156 Phosphoribosyl transferase domain JC777_05180 PF01171 PP-loop family JC777_05180 PF09179 TilS substrate binding domain JC777_05180 PF11734 TilS substrate C-terminal domain JC777_05185 PF07228 Stage II sporulation protein E (SpoIIE) JC777_05200 PF00575 S1 RNA binding domain JC777_05210 PF09578 Spore cortex protein YabQ (Spore_YabQ) JC777_05215 PF07873 YabP family JC777_05220 PF01479 S4 domain JC777_05225 PF03819 MazG nucleotide pyrophosphohydrolase domain JC777_05225 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JC777_05230 PF01943 Polysaccharide biosynthesis protein JC777_05230 PF14667 Polysaccharide biosynthesis C-terminal domain JC777_05235 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin JC777_05235 PF15714 Stage V sporulation protein T C-terminal, transcription factor JC777_05240 PF00271 Helicase conserved C-terminal domain JC777_05240 PF02559 CarD-like/TRCF domain JC777_05240 PF00270 DEAD/DEAH box helicase JC777_05240 PF17757 UvrB interaction domain JC777_05240 PF03461 TRCF domain JC777_05250 PF01195 Peptidyl-tRNA hydrolase JC777_05255 PF14572 Phosphoribosyl synthetase-associated domain JC777_05255 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase JC777_05260 PF00132 Bacterial transferase hexapeptide (six repeats) JC777_05260 PF00483 Nucleotidyl transferase JC777_05265 PF04026 SpoVG JC777_05270 PF01042 Endoribonuclease L-PSP JC777_05275 PF00156 Phosphoribosyl transferase domain JC777_05275 PF09182 Bacterial purine repressor, N-terminal JC777_05280 PF08544 GHMP kinases C terminal JC777_05280 PF00288 GHMP kinases N terminal domain JC777_05285 PF00269 Small, acid-soluble spore proteins, alpha/beta type JC777_05290 PF06257 Biofilm formation stimulator VEG JC777_05295 PF05582 YabG peptidase U57 JC777_05300 PF00398 Ribosomal RNA adenine dimethylase JC777_05305 PF13331 Domain of unknown function (DUF4093) JC777_05305 PF13662 Toprim domain JC777_05310 PF01026 TatD related DNase JC777_05315 PF08264 Anticodon-binding domain of tRNA JC777_05315 PF09334 tRNA synthetases class I (M) JC777_05315 PF01588 Putative tRNA binding domain JC777_05320 PF18277 AbrB C-terminal domain JC777_05320 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin JC777_05325 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JC777_05330 PF01541 GIY-YIG catalytic domain JC777_05335 PF05175 Methyltransferase small domain JC777_05340 PF06156 Initiation control protein YabA JC777_05345 PF04468 PSP1 C-terminal conserved region JC777_05350 PF09115 DNA polymerase III, delta subunit, C terminal JC777_05355 PF02223 Thymidylate kinase JC777_05360 PF01276 Orn/Lys/Arg decarboxylase, major domain JC777_05360 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain JC777_05400 PF10704 Protein of unknown function (DUF2508) JC777_05405 PF13662 Toprim domain JC777_05405 PF02132 RecR protein JC777_05410 PF02575 YbaB/EbfC DNA-binding family JC777_05415 PF12169 DNA polymerase III subunits gamma and tau domain III JC777_05425 PF14437 MafB19-like deaminase JC777_05430 PF00857 Isochorismatase family JC777_05435 PF01712 Deoxynucleoside kinase JC777_05440 PF01712 Deoxynucleoside kinase JC777_05455 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JC777_05455 PF02403 Seryl-tRNA synthetase N-terminal domain JC777_05460 PF01174 SNO glutamine amidotransferase family JC777_05465 PF01680 SOR/SNZ family JC777_05470 PF07943 Penicillin-binding protein 5, C-terminal domain JC777_05470 PF00768 D-alanyl-D-alanine carboxypeptidase JC777_05480 PF00571 CBS domain JC777_05480 PF00478 IMP dehydrogenase / GMP reductase domain JC777_05485 PF14175 YaaC-like Protein JC777_05515 PF00521 DNA gyrase/topoisomerase IV, subunit A JC777_05515 PF03989 DNA gyrase C-terminal domain, beta-propeller JC777_05520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC777_05520 PF00986 DNA gyrase B subunit, carboxyl terminus JC777_05520 PF01751 Toprim domain JC777_05520 PF00204 DNA gyrase B JC777_05525 PF02463 RecF/RecN/SMC N terminal domain JC777_05535 PF00712 DNA polymerase III beta subunit, N-terminal domain JC777_05535 PF02767 DNA polymerase III beta subunit, central domain JC777_05535 PF02768 DNA polymerase III beta subunit, C-terminal domain JC777_05540 PF11638 DnaA N-terminal domain JC777_05540 PF00308 Bacterial dnaA protein JC777_05540 PF08299 Bacterial dnaA protein helix-turn-helix JC777_05545 PF00468 Ribosomal protein L34 JC777_05550 PF00825 Ribonuclease P JC777_05555 PF02096 60Kd inner membrane protein JC777_05560 PF14804 Jag N-terminus JC777_05560 PF01424 R3H domain JC777_05565 PF01926 50S ribosome-binding GTPase JC777_05565 PF10396 GTP-binding protein TrmE N-terminus JC777_05565 PF12631 MnmE helical domain JC777_05570 PF13932 GidA associated domain JC777_05570 PF01134 Glucose inhibited division protein A JC777_05575 PF02527 rRNA small subunit methyltransferase G JC777_05580 PF02195 ParB-like nuclease domain JC777_05580 PF17762 HTH domain found in ParB protein JC777_05585 PF13614 AAA domain JC777_05590 PF02195 ParB-like nuclease domain JC777_05590 PF17762 HTH domain found in ParB protein JC777_05595 PF06866 Protein of unknown function (DUF1256) JC777_05600 PF00924 Mechanosensitive ion channel JC777_05605 PF06107 Bacterial protein of unknown function (DUF951) JC777_05610 PF01926 50S ribosome-binding GTPase JC777_05610 PF06071 Protein of unknown function (DUF933) JC777_05615 PF01250 Ribosomal protein S6 JC777_05620 PF00436 Single-strand binding protein family JC777_05625 PF01084 Ribosomal protein S18 JC777_05630 PF09991 Predicted membrane protein (DUF2232) JC777_05635 PF01368 DHH family JC777_05635 PF02272 DHHA1 domain JC777_05640 PF01281 Ribosomal protein L9, N-terminal domain JC777_05640 PF03948 Ribosomal protein L9, C-terminal domain JC777_05645 PF00772 DnaB-like helicase N terminal domain JC777_05645 PF03796 DnaB-like helicase C terminal domain JC777_05650 PF00709 Adenylosuccinate synthetase JC777_05675 PF00072 Response regulator receiver domain JC777_05675 PF00486 Transcriptional regulatory protein, C terminal JC777_05680 PF00672 HAMP domain JC777_05680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC777_05680 PF13426 PAS domain JC777_05680 PF00512 His Kinase A (phospho-acceptor) domain JC777_05690 PF09648 YycH protein JC777_05695 PF00753 Metallo-beta-lactamase superfamily JC777_05700 PF13180 PDZ domain JC777_05710 PF02590 Predicted SPOUT methyltransferase JC777_05720 PF14436 Bacterial EndoU nuclease JC777_05720 PF04740 LXG domain of WXG superfamily JC777_05735 PF06013 Proteins of 100 residues with WXG JC777_05755 PF00478 IMP dehydrogenase / GMP reductase domain JC777_05785 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JC777_05785 PF08279 HTH domain JC777_05785 PF00874 PRD domain JC777_05785 PF05043 Mga helix-turn-helix domain JC777_05790 PF16363 GDP-mannose 4,6 dehydratase JC777_05800 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain JC777_05800 PF02777 Iron/manganese superoxide dismutases, C-terminal domain JC777_05805 PF02898 Nitric oxide synthase, oxygenase domain JC777_05810 PF07690 Major Facilitator Superfamily JC777_05820 PF00072 Response regulator receiver domain JC777_05820 PF04397 LytTr DNA-binding domain JC777_05825 PF03788 LrgA family JC777_05830 PF04172 LrgB-like family JC777_05835 PF01594 AI-2E family transporter JC777_05840 PF01641 SelR domain JC777_05840 PF01625 Peptide methionine sulfoxide reductase JC777_05845 PF00873 AcrB/AcrD/AcrF family JC777_05850 PF00440 Bacterial regulatory proteins, tetR family JC777_05855 PF00005 ABC transporter JC777_05855 PF12848 ABC transporter JC777_05860 PF00535 Glycosyl transferase family 2 JC777_05875 PF00535 Glycosyl transferase family 2 JC777_05890 PF00535 Glycosyl transferase family 2 JC777_05895 PF03061 Thioesterase superfamily JC777_05910 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JC777_05915 PF03458 UPF0126 domain JC777_05925 PF00534 Glycosyl transferases group 1 JC777_05925 PF13439 Glycosyltransferase Family 4 JC777_05930 PF03808 Glycosyl transferase WecB/TagA/CpsF family JC777_05935 PF07690 Major Facilitator Superfamily JC777_05940 PF04397 LytTr DNA-binding domain JC777_05940 PF00072 Response regulator receiver domain JC777_05945 PF13722 5TM C-terminal transporter carbon starvation CstA JC777_05945 PF02554 Carbon starvation protein CstA JC777_05955 PF08543 Phosphomethylpyrimidine kinase JC777_05965 PF01053 Cys/Met metabolism PLP-dependent enzyme JC777_05970 PF04204 Homoserine O-succinyltransferase JC777_05975 PF01842 ACT domain JC777_05975 PF00742 Homoserine dehydrogenase JC777_05975 PF03447 Homoserine dehydrogenase, NAD binding domain JC777_05980 PF13472 GDSL-like Lipase/Acylhydrolase family JC777_05985 PF00005 ABC transporter JC777_05990 PF12679 ABC-2 family transporter protein JC777_05995 PF03167 Uracil DNA glycosylase superfamily JC777_06000 PF12823 Domain of unknown function (DUF3817) JC777_06010 PF00860 Permease family JC777_06015 PF02254 TrkA-N domain JC777_06015 PF07885 Ion channel JC777_06025 PF04241 Protein of unknown function (DUF423) JC777_06030 PF09671 Spore coat protein (Spore_GerQ) JC777_06035 PF07486 Cell Wall Hydrolase JC777_06040 PF00768 D-alanyl-D-alanine carboxypeptidase JC777_06040 PF07943 Penicillin-binding protein 5, C-terminal domain JC777_06045 PF06778 Chlorite dismutase JC777_06050 PF01515 Phosphate acetyl/butaryl transferase JC777_06055 PF03099 Biotin/lipoate A/B protein ligase family JC777_06065 PF07293 Protein of unknown function (DUF1450) JC777_06070 PF01032 FecCD transport family JC777_06075 PF01032 FecCD transport family JC777_06080 PF00005 ABC transporter JC777_06085 PF01497 Periplasmic binding protein JC777_06090 PF01966 HD domain JC777_06095 PF01361 Tautomerase enzyme JC777_06100 PF02163 Peptidase family M50 JC777_06105 PF08741 YwhD family JC777_06110 PF00912 Transglycosylase JC777_06110 PF00905 Penicillin binding protein transpeptidase domain JC777_06115 PF03009 Glycerophosphoryl diester phosphodiesterase family JC777_06120 PF13411 MerR HTH family regulatory protein JC777_06125 PF07690 Major Facilitator Superfamily JC777_06130 PF17284 Spermidine synthase tetramerisation domain JC777_06135 PF00491 Arginase family JC777_06150 PF02016 LD-carboxypeptidase N-terminal domain JC777_06150 PF17676 LD-carboxypeptidase C-terminal domain JC777_06155 PF09148 Domain of unknown function (DUF1934) JC777_06160 PF03485 Arginyl tRNA synthetase N terminal domain JC777_06160 PF05746 DALR anticodon binding domain JC777_06160 PF00750 tRNA synthetases class I (R) JC777_06170 PF02225 PA domain JC777_06170 PF04389 Peptidase family M28 JC777_06175 PF00557 Metallopeptidase family M24 JC777_06180 PF00005 ABC transporter JC777_06190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC777_06190 PF07730 Histidine kinase JC777_06195 PF00196 Bacterial regulatory proteins, luxR family JC777_06195 PF00072 Response regulator receiver domain JC777_06210 PF13091 PLD-like domain JC777_06215 PF13183 4Fe-4S dicluster domain JC777_06215 PF02754 Cysteine-rich domain JC777_06220 PF02803 Thiolase, C-terminal domain JC777_06220 PF00108 Thiolase, N-terminal domain JC777_06225 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JC777_06225 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JC777_06230 PF02770 Acyl-CoA dehydrogenase, middle domain JC777_06230 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JC777_06230 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JC777_06235 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JC777_06235 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JC777_06235 PF02770 Acyl-CoA dehydrogenase, middle domain JC777_06245 PF05066 HB1, ASXL, restriction endonuclease HTH domain JC777_06250 PF00117 Glutamine amidotransferase class-I JC777_06250 PF06418 CTP synthase N-terminus JC777_06255 PF10740 Domain of unknown function (DUF2529) JC777_06260 PF00072 Response regulator receiver domain JC777_06265 PF01116 Fructose-bisphosphate aldolase class-II JC777_06270 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JC777_06275 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded JC777_06280 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JC777_06280 PF07498 Rho termination factor, N-terminal domain JC777_06280 PF07497 Rho termination factor, RNA-binding domain JC777_06285 PF01197 Ribosomal protein L31 JC777_06290 PF00265 Thymidine kinase JC777_06295 PF03462 PCRF domain JC777_06295 PF00472 RF-1 domain JC777_06300 PF13847 Methyltransferase domain JC777_06300 PF17827 PrmC N-terminal domain JC777_06305 PF09551 Stage II sporulation protein R (spore_II_R) JC777_06315 PF03481 Putative GTP-binding controlling metal-binding JC777_06315 PF01300 Telomere recombination JC777_06320 PF02659 Putative manganese efflux pump JC777_06330 PF01613 Flavin reductase like domain JC777_06335 PF07681 DoxX JC777_06340 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JC777_06350 PF01451 Low molecular weight phosphotyrosine protein phosphatase JC777_06355 PF02502 Ribose/Galactose Isomerase JC777_06360 PF04260 Protein of unknown function (DUF436) JC777_06365 PF00464 Serine hydroxymethyltransferase JC777_06385 PF03899 ATP synthase I chain JC777_06390 PF00119 ATP synthase A chain JC777_06395 PF00137 ATP synthase subunit C JC777_06400 PF00430 ATP synthase B/B' CF(0) JC777_06405 PF00213 ATP synthase delta (OSCP) subunit JC777_06410 PF00306 ATP synthase alpha/beta chain, C terminal domain JC777_06410 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JC777_06410 PF02874 ATP synthase alpha/beta family, beta-barrel domain JC777_06415 PF00231 ATP synthase JC777_06420 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JC777_06420 PF02874 ATP synthase alpha/beta family, beta-barrel domain JC777_06425 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain JC777_06425 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain JC777_06440 PF00563 EAL domain JC777_06440 PF00990 Diguanylate cyclase, GGDEF domain JC777_06440 PF03707 Bacterial signalling protein N terminal repeat JC777_06450 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 JC777_06455 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit JC777_06460 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit JC777_06465 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit JC777_06470 PF00146 NADH dehydrogenase JC777_06480 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 JC777_06485 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L JC777_06490 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus JC777_06490 PF00361 Proton-conducting membrane transporter JC777_06490 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus JC777_06495 PF00361 Proton-conducting membrane transporter JC777_06500 PF00361 Proton-conducting membrane transporter JC777_06505 PF06612 Protein of unknown function (DUF1146) JC777_06515 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JC777_06520 PF08486 Stage II sporulation protein JC777_06525 PF04397 LytTr DNA-binding domain JC777_06525 PF00072 Response regulator receiver domain JC777_06530 PF00005 ABC transporter JC777_06540 PF01551 Peptidase family M23 JC777_06550 PF12116 Stage III sporulation protein D JC777_06560 PF01467 Cytidylyltransferase-like JC777_06570 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase JC777_06575 PF01061 ABC-2 type transporter JC777_06580 PF08239 Bacterial SH3 domain JC777_06580 PF00005 ABC transporter JC777_06585 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase JC777_06590 PF00535 Glycosyl transferase family 2 JC777_06590 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase JC777_06595 PF13439 Glycosyltransferase Family 4 JC777_06595 PF00534 Glycosyl transferases group 1 JC777_06605 PF00483 Nucleotidyl transferase JC777_06610 PF07977 FabA-like domain JC777_06615 PF03816 Cell envelope-related transcriptional attenuator domain JC777_06630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC777_06630 PF00512 His Kinase A (phospho-acceptor) domain JC777_06630 PF00989 PAS fold JC777_06630 PF16736 Single Cache-like JC777_06645 PF07690 Major Facilitator Superfamily JC777_06650 PF01520 N-acetylmuramoyl-L-alanine amidase JC777_06650 PF00395 S-layer homology domain JC777_06665 PF00005 ABC transporter JC777_06670 PF12704 MacB-like periplasmic core domain JC777_06670 PF02687 FtsX-like permease family JC777_06675 PF04893 Yip1 domain JC777_06710 PF12419 SNF2 Helicase protein JC777_06710 PF00271 Helicase conserved C-terminal domain JC777_06710 PF00176 SNF2 family N-terminal domain JC777_06715 PF04434 SWIM zinc finger JC777_06730 PF01476 LysM domain JC777_06730 PF06725 3D domain JC777_06735 PF02028 BCCT, betaine/carnitine/choline family transporter JC777_06750 PF07662 Na+ dependent nucleoside transporter C-terminus JC777_06750 PF01773 Na+ dependent nucleoside transporter N-terminus JC777_06755 PF01476 LysM domain JC777_06755 PF00877 NlpC/P60 family JC777_06760 PF01063 Amino-transferase class IV JC777_06765 PF00884 Sulfatase JC777_06775 PF09988 Uncharacterized metal-binding protein (DUF2227) JC777_06780 PF02652 L-lactate permease JC777_06785 PF13667 ThiC-associated domain JC777_06785 PF01964 Radical SAM ThiC family JC777_06790 PF02322 Cytochrome bd terminal oxidase subunit II JC777_06795 PF01654 Cytochrome bd terminal oxidase subunit I JC777_06810 PF00375 Sodium:dicarboxylate symporter family JC777_06815 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit JC777_06820 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JC777_06825 PF02378 Phosphotransferase system, EIIC JC777_06830 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit JC777_06835 PF02056 Family 4 glycosyl hydrolase JC777_06835 PF11975 Family 4 glycosyl hydrolase C-terminal domain JC777_06840 PF04794 YdjC-like protein JC777_06850 PF00158 Sigma-54 interaction domain JC777_06850 PF00874 PRD domain JC777_06850 PF03610 PTS system fructose IIA component JC777_06855 PF01522 Polysaccharide deacetylase JC777_06860 PF00953 Glycosyl transferase family 4 JC777_06865 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain JC777_06865 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain JC777_06865 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain JC777_06875 PF02350 UDP-N-acetylglucosamine 2-epimerase JC777_06905 PF18801 response regulator aspartate phosphatase H, N terminal JC777_06925 PF03816 Cell envelope-related transcriptional attenuator domain JC777_06930 PF09186 Domain of unknown function (DUF1949) JC777_06930 PF01205 Uncharacterized protein family UPF0029 JC777_06935 PF02645 Uncharacterised protein, DegV family COG1307 JC777_06940 PF01638 HxlR-like helix-turn-helix JC777_06945 PF01476 LysM domain JC777_06945 PF00877 NlpC/P60 family JC777_06950 PF00271 Helicase conserved C-terminal domain JC777_06950 PF04851 Type III restriction enzyme, res subunit JC777_06960 PF00313 'Cold-shock' DNA-binding domain JC777_06965 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus JC777_06965 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein JC777_06970 PF07516 SecA Wing and Scaffold domain JC777_06970 PF01043 SecA preprotein cross-linking domain JC777_06970 PF02810 SEC-C motif JC777_06970 PF07517 SecA DEAD-like domain JC777_06980 PF13442 Cytochrome C oxidase, cbb3-type, subunit III JC777_06985 PF00005 ABC transporter JC777_06990 PF02687 FtsX-like permease family JC777_06990 PF18075 FtsX extracellular domain JC777_06995 PF17820 PDZ domain JC777_06995 PF03572 Peptidase family S41 JC777_06995 PF01471 Putative peptidoglycan binding domain JC777_07000 PF17820 PDZ domain JC777_07015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JC777_07015 PF03466 LysR substrate binding domain JC777_07020 PF03601 Conserved hypothetical protein 698 JC777_07035 PF13411 MerR HTH family regulatory protein JC777_07045 PF00271 Helicase conserved C-terminal domain JC777_07045 PF12344 Ultra-violet resistance protein B JC777_07045 PF02151 UvrB/uvrC motif JC777_07045 PF04851 Type III restriction enzyme, res subunit JC777_07045 PF17757 UvrB interaction domain JC777_07050 PF00005 ABC transporter JC777_07050 PF17755 UvrA DNA-binding domain JC777_07050 PF17760 UvrA interaction domain JC777_07060 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV JC777_07065 PF07475 HPr Serine kinase C-terminal domain JC777_07065 PF02603 HPr Serine kinase N terminus JC777_07070 PF01790 Prolipoprotein diacylglyceryl transferase JC777_07075 PF13419 Haloacid dehalogenase-like hydrolase JC777_07080 PF14602 Hexapeptide repeat of succinyl-transferase JC777_07090 PF07992 Pyridine nucleotide-disulphide oxidoreductase JC777_07100 PF00293 NUDIX domain JC777_07105 PF03668 P-loop ATPase protein family JC777_07110 PF01933 Uncharacterised protein family UPF0052 JC777_07115 PF02650 WhiA C-terminal HTH domain JC777_07115 PF14527 WhiA LAGLIDADG-like domain JC777_07115 PF10298 WhiA N-terminal LAGLIDADG-like domain JC777_07120 PF00381 PTS HPr component phosphorylation site JC777_07125 PF00574 Clp protease JC777_07130 PF04239 Protein of unknown function (DUF421) JC777_07140 PF03862 SpoVAC/SpoVAEB sporulation membrane protein JC777_07145 PF07451 Stage V sporulation protein AD (SpoVAD) JC777_07150 PF03862 SpoVAC/SpoVAEB sporulation membrane protein JC777_07185 PF18801 response regulator aspartate phosphatase H, N terminal JC777_07195 PF04552 Sigma-54, DNA binding domain JC777_07195 PF00309 Sigma-54 factor, Activator interacting domain (AID) JC777_07195 PF04963 Sigma-54 factor, core binding domain JC777_07205 PF04198 Putative sugar-binding domain JC777_07210 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain JC777_07210 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain JC777_07215 PF00162 Phosphoglycerate kinase JC777_07220 PF00121 Triosephosphate isomerase JC777_07225 PF06415 BPG-independent PGAM N-terminus (iPGM_N) JC777_07225 PF01676 Metalloenzyme superfamily JC777_07230 PF00113 Enolase, C-terminal TIM barrel domain JC777_07230 PF03952 Enolase, N-terminal domain JC777_07235 PF03788 LrgA family JC777_07240 PF04172 LrgB-like family JC777_07245 PF03840 Preprotein translocase SecG subunit JC777_07250 PF12146 Serine aminopeptidase, S33 JC777_07255 PF00773 RNB domain JC777_07255 PF08206 Ribonuclease B OB domain JC777_07255 PF17876 Cold shock domain JC777_07255 PF00575 S1 RNA binding domain JC777_07260 PF01668 SmpB protein JC777_07275 PF03323 Bacillus/Clostridium GerA spore germination protein JC777_07280 PF05504 Spore germination B3/ GerAC like, C-terminal JC777_07295 PF03845 Spore germination protein JC777_07300 PF06146 Phosphate-starvation-inducible E JC777_07305 PF12833 Helix-turn-helix domain JC777_07305 PF02311 AraC-like ligand binding domain JC777_07310 PF01588 Putative tRNA binding domain JC777_07315 PF10710 Protein of unknown function (DUF2512) JC777_07320 PF02537 CrcB-like protein, Camphor Resistance (CrcB) JC777_07325 PF02537 CrcB-like protein, Camphor Resistance (CrcB) JC777_07335 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain JC777_07335 PF01565 FAD binding domain JC777_07340 PF07992 Pyridine nucleotide-disulphide oxidoreductase JC777_07345 PF07849 Protein of unknown function (DUF1641) JC777_07355 PF13460 NAD(P)H-binding JC777_07360 PF01235 Sodium:alanine symporter family JC777_07365 PF07662 Na+ dependent nucleoside transporter C-terminus JC777_07365 PF01773 Na+ dependent nucleoside transporter N-terminus JC777_07370 PF01773 Na+ dependent nucleoside transporter N-terminus JC777_07370 PF07662 Na+ dependent nucleoside transporter C-terminus JC777_07375 PF08280 M protein trans-acting positive regulator (MGA) HTH domain JC777_07375 PF00874 PRD domain JC777_07375 PF05043 Mga helix-turn-helix domain JC777_07390 PF00005 ABC transporter JC777_07395 PF00950 ABC 3 transport family JC777_07400 PF01297 Zinc-uptake complex component A periplasmic JC777_07425 PF03641 Possible lysine decarboxylase JC777_07430 PF00210 Ferritin-like domain JC777_07440 PF01047 MarR family JC777_07445 PF17954 Quercetinase C-terminal cupin domain JC777_07445 PF02678 Pirin JC777_07450 PF02868 Thermolysin metallopeptidase, alpha-helical domain JC777_07450 PF03413 Peptidase propeptide and YPEB domain JC777_07450 PF07504 Fungalysin/Thermolysin Propeptide Motif JC777_07450 PF01447 Thermolysin metallopeptidase, catalytic domain JC777_07455 PF01883 Iron-sulfur cluster assembly protein JC777_07460 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JC777_07460 PF00672 HAMP domain JC777_07460 PF02743 Cache domain JC777_07465 PF02743 Cache domain JC777_07465 PF00672 HAMP domain JC777_07465 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JC777_07470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC777_07470 PF16736 Single Cache-like JC777_07470 PF00989 PAS fold JC777_07470 PF00512 His Kinase A (phospho-acceptor) domain JC777_07475 PF00072 Response regulator receiver domain JC777_07475 PF00486 Transcriptional regulatory protein, C terminal JC777_07480 PF17969 L,D-transpeptidase C-terminal domain JC777_07480 PF03734 L,D-transpeptidase catalytic domain JC777_07490 PF09335 SNARE associated Golgi protein JC777_07500 PF00005 ABC transporter JC777_07515 PF00072 Response regulator receiver domain JC777_07515 PF00486 Transcriptional regulatory protein, C terminal JC777_07520 PF00672 HAMP domain JC777_07520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC777_07520 PF00512 His Kinase A (phospho-acceptor) domain JC777_07520 PF13426 PAS domain JC777_07530 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JC777_07530 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JC777_07540 PF02096 60Kd inner membrane protein JC777_07545 PF13520 Amino acid permease JC777_07565 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JC777_07565 PF00672 HAMP domain JC777_07565 PF02743 Cache domain JC777_07570 PF01910 Thiamine-binding protein JC777_07585 PF01619 Proline dehydrogenase JC777_07590 PF07943 Penicillin-binding protein 5, C-terminal domain JC777_07590 PF00768 D-alanyl-D-alanine carboxypeptidase JC777_07595 PF14115 YuzL-like protein JC777_07600 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JC777_07600 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JC777_07600 PF00378 Enoyl-CoA hydratase/isomerase JC777_07605 PF02803 Thiolase, C-terminal domain JC777_07605 PF00108 Thiolase, N-terminal domain JC777_07610 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JC777_07610 PF02770 Acyl-CoA dehydrogenase, middle domain JC777_07610 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JC777_07635 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain JC777_07635 PF00056 lactate/malate dehydrogenase, NAD binding domain JC777_07655 PF03960 ArsC family JC777_07660 PF01597 Glycine cleavage H-protein JC777_07665 PF01751 Toprim domain JC777_07670 PF00085 Thioredoxin JC777_07680 PF00005 ABC transporter JC777_07680 PF09383 NIL domain JC777_07685 PF00528 Binding-protein-dependent transport system inner membrane component JC777_07690 PF03180 NLPA lipoprotein JC777_07695 PF00005 ABC transporter JC777_07700 PF01458 Uncharacterized protein family (UPF0051) JC777_07705 PF00266 Aminotransferase class-V JC777_07710 PF01592 NifU-like N terminal domain JC777_07715 PF01458 Uncharacterized protein family (UPF0051) JC777_07730 PF02872 5'-nucleotidase, C-terminal domain JC777_07735 PF08827 Domain of unknown function (DUF1805) JC777_07740 PF09560 Sporulation protein YunB (Spo_YunB) JC777_07745 PF01551 Peptidase family M23 JC777_07750 PF04055 Radical SAM superfamily JC777_07750 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family JC777_07765 PF10086 YhfC intramembrane metalloprotease JC777_07770 PF13411 MerR HTH family regulatory protein JC777_07770 PF07739 TipAS antibiotic-recognition domain JC777_07780 PF06265 Protein of unknown function (DUF1027) JC777_07790 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded JC777_07795 PF01934 Protein of unknown function DUF86 JC777_07805 PF13344 Haloacid dehalogenase-like hydrolase JC777_07810 PF04608 Phosphatidylglycerophosphatase A JC777_07820 PF01106 NifU-like domain JC777_07825 PF07315 Protein of unknown function (DUF1462) JC777_07835 PF11188 Protein of unknown function (DUF2975) JC777_07840 PF13443 Cro/C1-type HTH DNA-binding domain JC777_07850 PF03831 PhnA domain JC777_07850 PF08274 PhnA Zinc-Ribbon JC777_07855 PF07992 Pyridine nucleotide-disulphide oxidoreductase JC777_07860 PF07293 Protein of unknown function (DUF1450) JC777_07865 PF07662 Na+ dependent nucleoside transporter C-terminus JC777_07865 PF01773 Na+ dependent nucleoside transporter N-terminus JC777_07870 PF01678 Diaminopimelate epimerase JC777_07875 PF01521 Iron-sulphur cluster biosynthesis JC777_07885 PF04463 Protein of unknown function (DUF523) JC777_07900 PF07992 Pyridine nucleotide-disulphide oxidoreductase JC777_07905 PF07992 Pyridine nucleotide-disulphide oxidoreductase JC777_07910 PF17369 Family of unknown function (DUF5391) JC777_07915 PF00293 NUDIX domain JC777_07915 PF13344 Haloacid dehalogenase-like hydrolase JC777_07925 PF06725 3D domain JC777_07935 PF02789 Cytosol aminopeptidase family, N-terminal domain JC777_07935 PF00883 Cytosol aminopeptidase family, catalytic domain JC777_07940 PF02457 DisA bacterial checkpoint controller nucleotide-binding JC777_07940 PF10372 Bacterial membrane-spanning protein N-terminus JC777_07945 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JC777_07945 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JC777_07945 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JC777_07945 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JC777_07950 PF00483 Nucleotidyl transferase JC777_07955 PF02632 BioY family JC777_07965 PF03061 Thioesterase superfamily JC777_07980 PF03129 Anticodon binding domain JC777_07980 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JC777_07985 PF03600 Citrate transporter JC777_07990 PF00929 Exonuclease JC777_07995 PF08810 Kinase associated protein B JC777_08010 PF00080 Copper/zinc superoxide dismutase (SODC) JC777_08015 PF00155 Aminotransferase class I and II JC777_08025 PF00561 alpha/beta hydrolase fold JC777_08025 PF08386 TAP-like protein JC777_08030 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JC777_08030 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JC777_08035 PF01037 Lrp/AsnC ligand binding domain JC777_08040 PF00155 Aminotransferase class I and II JC777_08045 PF00575 S1 RNA binding domain JC777_08050 PF04070 Domain of unknown function (DUF378) JC777_08055 PF00342 Phosphoglucose isomerase JC777_08060 PF08868 YugN-like family JC777_08065 PF07885 Ion channel JC777_08065 PF02254 TrkA-N domain JC777_08070 PF02308 MgtC family JC777_08105 PF05697 Bacterial trigger factor protein (TF) JC777_08105 PF05698 Bacterial trigger factor protein (TF) C-terminus JC777_08200 PF00056 lactate/malate dehydrogenase, NAD binding domain JC777_08200 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain JC777_08205 PF00128 Alpha amylase, catalytic domain JC777_08205 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) JC777_08205 PF02806 Alpha amylase, C-terminal all-beta domain JC777_08210 PF00483 Nucleotidyl transferase JC777_08215 PF00483 Nucleotidyl transferase JC777_08220 PF08323 Starch synthase catalytic domain JC777_08220 PF00534 Glycosyl transferases group 1 JC777_08225 PF00343 Carbohydrate phosphorylase JC777_08240 PF00313 'Cold-shock' DNA-binding domain JC777_08245 PF01258 Prokaryotic dksA/traR C4-type zinc finger JC777_08250 PF01040 UbiA prenyltransferase family JC777_08255 PF00425 chorismate binding enzyme JC777_08260 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JC777_08260 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JC777_08260 PF16582 Middle domain of thiamine pyrophosphate JC777_08265 PF12697 Alpha/beta hydrolase family JC777_08270 PF00378 Enoyl-CoA hydratase/isomerase JC777_08275 PF13193 AMP-binding enzyme C-terminal domain JC777_08275 PF00501 AMP-binding enzyme JC777_08280 PF13378 Enolase C-terminal domain-like JC777_08280 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain JC777_08295 PF02687 FtsX-like permease family JC777_08300 PF00005 ABC transporter JC777_08305 PF02687 FtsX-like permease family JC777_08310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC777_08315 PF00072 Response regulator receiver domain JC777_08315 PF00486 Transcriptional regulatory protein, C terminal JC777_08325 PF00005 ABC transporter JC777_08330 PF00781 Diacylglycerol kinase catalytic domain JC777_08335 PF00156 Phosphoribosyl transferase domain JC777_08350 PF09515 Thiamine transporter protein (Thia_YuaJ) JC777_08360 PF17910 FeoB cytosolic helical domain JC777_08360 PF07664 Ferrous iron transport protein B C terminus JC777_08360 PF02421 Ferrous iron transport protein B JC777_08360 PF07670 Nucleoside recognition JC777_08375 PF04012 PspA/IM30 family JC777_08405 PF02322 Cytochrome bd terminal oxidase subunit II JC777_08410 PF01654 Cytochrome bd terminal oxidase subunit I JC777_08415 PF00484 Carbonic anhydrase JC777_08420 PF01809 Putative membrane protein insertion efficiency factor JC777_08425 PF02664 S-Ribosylhomocysteinase (LuxS) JC777_08435 PF00293 NUDIX domain JC777_08450 PF00528 Binding-protein-dependent transport system inner membrane component JC777_08455 PF00005 ABC transporter JC777_08475 PF00884 Sulfatase JC777_08480 PF01022 Bacterial regulatory protein, arsR family JC777_08485 PF01510 N-acetylmuramoyl-L-alanine amidase JC777_08485 PF01471 Putative peptidoglycan binding domain JC777_08490 PF09339 IclR helix-turn-helix domain JC777_08490 PF01614 Bacterial transcriptional regulator JC777_08495 PF08125 Mannitol dehydrogenase C-terminal domain JC777_08495 PF01232 Mannitol dehydrogenase Rossmann domain JC777_08500 PF03786 D-mannonate dehydratase (UxuA) JC777_08505 PF02447 GntP family permease JC777_08510 PF01081 KDPG and KHG aldolase JC777_08525 PF00395 S-layer homology domain JC777_08525 PF02903 Alpha amylase, N-terminal ig-like domain JC777_08525 PF00128 Alpha amylase, catalytic domain JC777_08535 PF08280 M protein trans-acting positive regulator (MGA) HTH domain JC777_08535 PF05043 Mga helix-turn-helix domain JC777_08535 PF00874 PRD domain JC777_08560 PF01293 Phosphoenolpyruvate carboxykinase JC777_08565 PF02773 S-adenosylmethionine synthetase, C-terminal domain JC777_08565 PF02772 S-adenosylmethionine synthetase, central domain JC777_08565 PF00438 S-adenosylmethionine synthetase, N-terminal domain JC777_08570 PF13302 Acetyltransferase (GNAT) domain JC777_08585 PF00994 Probable molybdopterin binding domain JC777_08590 PF12804 MobA-like NTP transferase domain JC777_08595 PF00132 Bacterial transferase hexapeptide (six repeats) JC777_08600 PF12146 Serine aminopeptidase, S33 JC777_08605 PF10776 Protein of unknown function (DUF2600) JC777_08610 PF08279 HTH domain JC777_08610 PF13280 WYL domain JC777_08620 PF01177 Asp/Glu/Hydantoin racemase JC777_08630 PF00005 ABC transporter JC777_08635 PF06962 Putative rRNA methylase JC777_08640 PF16199 Radical_SAM C-terminal domain JC777_08640 PF04055 Radical SAM superfamily JC777_08645 PF10732 Protein of unknown function (DUF2524) JC777_08655 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JC777_08660 PF00005 ABC transporter JC777_08670 PF07690 Major Facilitator Superfamily JC777_08675 PF09334 tRNA synthetases class I (M) JC777_08675 PF08264 Anticodon-binding domain of tRNA JC777_08675 PF00133 tRNA synthetases class I (I, L, M and V) JC777_08675 PF13603 Leucyl-tRNA synthetase, Domain 2 JC777_08705 PF03323 Bacillus/Clostridium GerA spore germination protein JC777_08710 PF00561 alpha/beta hydrolase fold JC777_08720 PF00581 Rhodanese-like domain JC777_08735 PF02665 Nitrate reductase gamma subunit JC777_08740 PF02613 Nitrate reductase delta subunit JC777_08745 PF13247 4Fe-4S dicluster domain JC777_08745 PF14711 Respiratory nitrate reductase beta C-terminal JC777_08750 PF01568 Molydopterin dinucleotide binding domain JC777_08750 PF14710 Respiratory nitrate reductase alpha N-terminal JC777_08750 PF00384 Molybdopterin oxidoreductase JC777_08755 PF00027 Cyclic nucleotide-binding domain JC777_08755 PF00325 Bacterial regulatory proteins, crp family JC777_08760 PF04055 Radical SAM superfamily JC777_08760 PF06463 Molybdenum Cofactor Synthesis C JC777_08765 PF00899 ThiF family JC777_08770 PF01967 MoaC family JC777_08775 PF00994 Probable molybdopterin binding domain JC777_08775 PF03454 MoeA C-terminal region (domain IV) JC777_08775 PF03453 MoeA N-terminal region (domain I and II) JC777_08780 PF03205 Molybdopterin guanine dinucleotide synthesis protein B JC777_08785 PF02391 MoaE protein JC777_08795 PF07690 Major Facilitator Superfamily JC777_08800 PF06800 Sugar transport protein JC777_08805 PF02559 CarD-like/TRCF domain JC777_08815 PF10957 Sporulation protein Cse60 JC777_08860 PF00535 Glycosyl transferase family 2 JC777_08880 PF08327 Activator of Hsp90 ATPase homolog 1-like protein JC777_08885 PF01022 Bacterial regulatory protein, arsR family JC777_08890 PF07690 Major Facilitator Superfamily JC777_08900 PF14667 Polysaccharide biosynthesis C-terminal domain JC777_08900 PF01943 Polysaccharide biosynthesis protein JC777_08905 PF00849 RNA pseudouridylate synthase JC777_08905 PF01479 S4 domain JC777_08910 PF08220 DeoR-like helix-turn-helix domain JC777_08915 PF01546 Peptidase family M20/M25/M40 JC777_08920 PF02834 LigT like Phosphoesterase JC777_08925 PF00128 Alpha amylase, catalytic domain JC777_08925 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) JC777_08925 PF17999 Pullulanase N1-terminal domain JC777_08930 PF01636 Phosphotransferase enzyme family JC777_08935 PF14165 YtzH-like protein JC777_08940 PF02390 Putative methyltransferase JC777_08945 PF00753 Metallo-beta-lactamase superfamily JC777_08955 PF05343 M42 glutamyl aminopeptidase JC777_08970 PF07282 Putative transposase DNA-binding domain JC777_08970 PF12323 Helix-turn-helix domain JC777_08970 PF01385 Probable transposase JC777_08975 PF01931 Protein of unknown function DUF84 JC777_08980 PF00085 Thioredoxin JC777_08985 PF07285 Protein of unknown function (DUF1444) JC777_08990 PF14794 Domain of unknown function (DUF4479) JC777_08990 PF01588 Putative tRNA binding domain JC777_09000 PF17854 FtsK alpha domain JC777_09000 PF09397 Ftsk gamma domain JC777_09000 PF01580 FtsK/SpoIIIE family JC777_09010 PF08245 Mur ligase middle domain JC777_09010 PF02875 Mur ligase family, glutamate ligase domain JC777_09010 PF01225 Mur ligase family, catalytic domain JC777_09015 PF13302 Acetyltransferase (GNAT) domain JC777_09025 PF02073 Thermophilic metalloprotease (M29) JC777_09035 PF11009 Protein of unknown function (DUF2847) JC777_09040 PF01817 Chorismate mutase type II JC777_09040 PF00793 DAHP synthetase I family JC777_09045 PF00356 Bacterial regulatory proteins, lacI family JC777_09055 PF01741 Large-conductance mechanosensitive channel, MscL JC777_09060 PF00850 Histone deacetylase domain JC777_09065 PF00571 CBS domain JC777_09070 PF00583 Acetyltransferase (GNAT) family JC777_09075 PF00501 AMP-binding enzyme JC777_09075 PF13193 AMP-binding enzyme C-terminal domain JC777_09085 PF04542 Sigma-70 region 2 JC777_09085 PF08281 Sigma-70, region 4 JC777_09095 PF00579 tRNA synthetases class I (W and Y) JC777_09095 PF01479 S4 domain JC777_09115 PF04740 LXG domain of WXG superfamily JC777_09115 PF14436 Bacterial EndoU nuclease JC777_09120 PF01479 S4 domain JC777_09120 PF00163 Ribosomal protein S4/S9 N-terminal domain JC777_09125 PF01053 Cys/Met metabolism PLP-dependent enzyme JC777_09130 PF13185 GAF domain JC777_09135 PF00440 Bacterial regulatory proteins, tetR family JC777_09140 PF00892 EamA-like transporter family JC777_09145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JC777_09145 PF03466 LysR substrate binding domain JC777_09150 PF06160 Septation ring formation regulator, EzrA JC777_09155 PF00266 Aminotransferase class-V JC777_09160 PF02568 Thiamine biosynthesis protein (ThiI) JC777_09160 PF02926 THUMP domain JC777_09165 PF00269 Small, acid-soluble spore proteins, alpha/beta type JC777_09170 PF13193 AMP-binding enzyme C-terminal domain JC777_09170 PF00501 AMP-binding enzyme JC777_09175 PF07969 Amidohydrolase family JC777_09180 PF01513 ATP-NAD kinase JC777_09190 PF09579 Sporulation protein YtfJ (Spore_YtfJ) JC777_09195 PF08534 Redoxin JC777_09200 PF02384 N-6 DNA Methylase JC777_09205 PF00871 Acetokinase family JC777_09215 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JC777_09215 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JC777_09225 PF00764 Arginosuccinate synthase JC777_09230 PF14698 Argininosuccinate lyase C-terminal JC777_09230 PF00206 Lyase JC777_09250 PF00582 Universal stress protein family JC777_09260 PF05222 Alanine dehydrogenase/PNT, N-terminal domain JC777_09260 PF01262 Alanine dehydrogenase/PNT, C-terminal domain JC777_09280 PF00557 Metallopeptidase family M24 JC777_09280 PF01321 Creatinase/Prolidase N-terminal domain JC777_09290 PF00392 Bacterial regulatory proteins, gntR family JC777_09290 PF03061 Thioesterase superfamily JC777_09290 PF00571 CBS domain JC777_09290 PF07085 DRTGG domain JC777_09300 PF01368 DHH family JC777_09300 PF02272 DHHA1 domain JC777_09310 PF14034 Sporulation protein YtrH JC777_09315 PF07733 Bacterial DNA polymerase III alpha NTPase domain JC777_09315 PF01336 OB-fold nucleic acid binding domain JC777_09315 PF02811 PHP domain JC777_09315 PF14579 Helix-hairpin-helix motif JC777_09315 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JC777_09320 PF00390 Malic enzyme, N-terminal domain JC777_09320 PF03949 Malic enzyme, NAD binding domain JC777_09325 PF00392 Bacterial regulatory proteins, gntR family JC777_09330 PF17848 Acetyl-coA carboxylase zinc finger domain JC777_09330 PF01039 Carboxyl transferase domain JC777_09335 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit JC777_09340 PF00365 Phosphofructokinase JC777_09345 PF00391 PEP-utilising enzyme, mobile domain JC777_09345 PF00224 Pyruvate kinase, barrel domain JC777_09345 PF02887 Pyruvate kinase, alpha/beta domain JC777_09350 PF04186 FxsA cytoplasmic membrane protein JC777_09355 PF01594 AI-2E family transporter JC777_09360 PF04284 Protein of unknown function (DUF441) JC777_09365 PF00285 Citrate synthase, C-terminal domain JC777_09370 PF00180 Isocitrate/isopropylmalate dehydrogenase JC777_09375 PF00056 lactate/malate dehydrogenase, NAD binding domain JC777_09375 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain JC777_09390 PF00486 Transcriptional regulatory protein, C terminal JC777_09390 PF00072 Response regulator receiver domain JC777_09395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC777_09395 PF00512 His Kinase A (phospho-acceptor) domain JC777_09395 PF00989 PAS fold JC777_09395 PF16736 Single Cache-like JC777_09400 PF00476 DNA polymerase family A JC777_09400 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain JC777_09400 PF01367 5'-3' exonuclease, C-terminal SAM fold JC777_09405 PF06827 Zinc finger found in FPG and IleRS JC777_09405 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain JC777_09405 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain JC777_09410 PF02659 Putative manganese efflux pump JC777_09415 PF01121 Dephospho-CoA kinase JC777_09420 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain JC777_09420 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain JC777_09425 PF02675 S-adenosylmethionine decarboxylase JC777_09430 PF03477 ATP cone domain JC777_09435 PF07261 Replication initiation and membrane attachment JC777_09440 PF07319 Primosomal protein DnaI N-terminus JC777_09440 PF01695 IstB-like ATP binding protein JC777_09445 PF08812 YtxC-like family JC777_09450 PF03129 Anticodon binding domain JC777_09450 PF02824 TGS domain JC777_09450 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JC777_09450 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JC777_09455 PF05198 Translation initiation factor IF-3, N-terminal domain JC777_09455 PF00707 Translation initiation factor IF-3, C-terminal domain JC777_09460 PF01632 Ribosomal protein L35 JC777_09465 PF00453 Ribosomal protein L20 JC777_09475 PF05343 M42 glutamyl aminopeptidase JC777_09480 PF16859 Tetracyclin repressor-like, C-terminal domain JC777_09480 PF00440 Bacterial regulatory proteins, tetR family JC777_09490 PF07690 Major Facilitator Superfamily JC777_09500 PF01966 HD domain JC777_09505 PF14098 Small, acid-soluble spore protein I JC777_09510 PF00588 SpoU rRNA Methylase family JC777_09510 PF08032 RNA 2'-O ribose methyltransferase substrate binding JC777_09515 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain JC777_09515 PF01409 tRNA synthetases class II core domain (F) JC777_09520 PF03483 B3/4 domain JC777_09520 PF03484 tRNA synthetase B5 domain JC777_09520 PF01588 Putative tRNA binding domain JC777_09520 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain JC777_09520 PF03147 Ferredoxin-fold anticodon binding domain JC777_09525 PF01336 OB-fold nucleic acid binding domain JC777_09525 PF00152 tRNA synthetases class II (D, K and N) JC777_09535 PF11858 Domain of unknown function (DUF3378) JC777_09535 PF01351 Ribonuclease HII JC777_09540 PF05164 Cell division protein ZapA JC777_09545 PF02674 Colicin V production protein JC777_09550 PF02811 PHP domain JC777_09550 PF14716 Helix-hairpin-helix domain JC777_09550 PF14791 DNA polymerase beta thumb JC777_09555 PF00488 MutS domain V JC777_09555 PF01713 Smr domain JC777_09560 PF00849 RNA pseudouridylate synthase JC777_09560 PF01479 S4 domain JC777_09565 PF05525 Branched-chain amino acid transport protein JC777_09570 PF10672 S-adenosylmethionine-dependent methyltransferase JC777_09570 PF17785 PUA-like domain JC777_09575 PF09962 Uncharacterized conserved protein (DUF2196) JC777_09585 PF00072 Response regulator receiver domain JC777_09585 PF00486 Transcriptional regulatory protein, C terminal JC777_09590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC777_09590 PF00512 His Kinase A (phospho-acceptor) domain JC777_09595 PF00005 ABC transporter JC777_09615 PF05163 DinB family JC777_09625 PF00501 AMP-binding enzyme JC777_09625 PF13193 AMP-binding enzyme C-terminal domain JC777_09630 PF08359 YsiA-like protein, C-terminal region JC777_09630 PF00440 Bacterial regulatory proteins, tetR family JC777_09635 PF00378 Enoyl-CoA hydratase/isomerase JC777_09640 PF01012 Electron transfer flavoprotein domain JC777_09645 PF00766 Electron transfer flavoprotein FAD-binding domain JC777_09645 PF01012 Electron transfer flavoprotein domain JC777_09650 PF00085 Thioredoxin JC777_09660 PF08459 UvrC Helix-hairpin-helix N-terminal JC777_09660 PF02151 UvrB/uvrC motif JC777_09660 PF01541 GIY-YIG catalytic domain JC777_09665 PF10702 Protein of unknown function (DUF2507) JC777_09670 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit JC777_09675 PF02910 Fumarate reductase flavoprotein C-term JC777_09675 PF00890 FAD binding domain JC777_09680 PF13183 4Fe-4S dicluster domain JC777_09680 PF13085 2Fe-2S iron-sulfur cluster binding domain JC777_09690 PF02557 D-alanyl-D-alanine carboxypeptidase JC777_09695 PF01618 MotA/TolQ/ExbB proton channel family JC777_09700 PF00691 OmpA family JC777_09700 PF13677 Membrane MotB of proton-channel complex MotA/MotB JC777_09705 PF13732 Domain of unknown function (DUF4162) JC777_09705 PF00005 ABC transporter JC777_09715 PF02082 Transcriptional regulator JC777_09725 PF00196 Bacterial regulatory proteins, luxR family JC777_09730 PF01177 Asp/Glu/Hydantoin racemase JC777_09735 PF10646 Sporulation and spore germination JC777_09740 PF01138 3' exoribonuclease family, domain 1 JC777_09740 PF03725 3' exoribonuclease family, domain 2 JC777_09745 PF01725 Ham1 family JC777_09750 PF12850 Calcineurin-like phosphoesterase superfamily domain JC777_09770 PF00440 Bacterial regulatory proteins, tetR family JC777_09780 PF03176 MMPL family JC777_09785 PF00501 AMP-binding enzyme JC777_09785 PF13193 AMP-binding enzyme C-terminal domain JC777_09785 PF00668 Condensation domain JC777_09785 PF00550 Phosphopantetheine attachment site JC777_09795 PF00668 Condensation domain JC777_09795 PF08659 KR domain JC777_09795 PF13193 AMP-binding enzyme C-terminal domain JC777_09795 PF00501 AMP-binding enzyme JC777_09795 PF00109 Beta-ketoacyl synthase, N-terminal domain JC777_09795 PF02801 Beta-ketoacyl synthase, C-terminal domain JC777_09795 PF00550 Phosphopantetheine attachment site JC777_09795 PF14765 Polyketide synthase dehydratase JC777_09795 PF16197 Ketoacyl-synthetase C-terminal extension JC777_09800 PF00698 Acyl transferase domain JC777_09805 PF01648 4'-phosphopantetheinyl transferase superfamily JC777_09820 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JC777_09820 PF05698 Bacterial trigger factor protein (TF) C-terminus JC777_09820 PF05697 Bacterial trigger factor protein (TF) JC777_09825 PF07724 AAA domain (Cdc48 subfamily) JC777_09825 PF10431 C-terminal, D2-small domain, of ClpB protein JC777_09825 PF06689 ClpX C4-type zinc finger JC777_09830 PF00004 ATPase family associated with various cellular activities (AAA) JC777_09830 PF05362 Lon protease (S16) C-terminal proteolytic domain JC777_09835 PF00004 ATPase family associated with various cellular activities (AAA) JC777_09835 PF05362 Lon protease (S16) C-terminal proteolytic domain JC777_09835 PF02190 ATP-dependent protease La (LON) substrate-binding domain JC777_09840 PF01926 50S ribosome-binding GTPase JC777_09845 PF01488 Shikimate / quinate 5-dehydrogenase JC777_09845 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain JC777_09845 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain JC777_09850 PF01578 Cytochrome C assembly protein JC777_09855 PF03900 Porphobilinogen deaminase, C-terminal domain JC777_09855 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain JC777_09860 PF02602 Uroporphyrinogen-III synthase HemD JC777_09865 PF00490 Delta-aminolevulinic acid dehydratase JC777_09870 PF00202 Aminotransferase class-III JC777_09875 PF01476 LysM domain JC777_09875 PF01476 LysM domain JC777_09890 PF08264 Anticodon-binding domain of tRNA JC777_09890 PF00133 tRNA synthetases class I (I, L, M and V) JC777_09890 PF10458 Valyl tRNA synthetase tRNA binding arm JC777_09895 PF08245 Mur ligase middle domain JC777_09895 PF02875 Mur ligase family, glutamate ligase domain JC777_09905 PF02545 Maf-like protein JC777_09910 PF04002 RadC-like JAB domain JC777_09930 PF04085 rod shape-determining protein MreC JC777_09940 PF03775 Septum formation inhibitor MinC, C-terminal domain JC777_09945 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain JC777_09950 PF01551 Peptidase family M23 JC777_09955 PF02163 Peptidase family M50 JC777_09960 PF10150 Ribonuclease E/G family JC777_09960 PF00575 S1 RNA binding domain JC777_09965 PF00829 Ribosomal prokaryotic L21 protein JC777_09970 PF04327 Cysteine protease Prp JC777_09975 PF01016 Ribosomal L27 protein JC777_09980 PF14682 Sporulation initiation phospho-transferase B, C-terminal JC777_09980 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain JC777_09985 PF01926 50S ribosome-binding GTPase JC777_09985 PF09269 Domain of unknown function (DUF1967) JC777_09985 PF01018 GTP1/OBG JC777_09990 PF00486 Transcriptional regulatory protein, C terminal JC777_09990 PF00072 Response regulator receiver domain JC777_09995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC777_10000 PF00005 ABC transporter JC777_10005 PF02687 FtsX-like permease family JC777_10010 PF02687 FtsX-like permease family JC777_10015 PF01842 ACT domain JC777_10015 PF00800 Prephenate dehydratase JC777_10020 PF03473 MOSC domain JC777_10020 PF03475 3-alpha domain JC777_10025 PF02829 3H domain JC777_10025 PF08279 HTH domain JC777_10030 PF00266 Aminotransferase class-V JC777_10035 PF00890 FAD binding domain JC777_10035 PF02910 Fumarate reductase flavoprotein C-term JC777_10040 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain JC777_10040 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain JC777_10045 PF02445 Quinolinate synthetase A protein JC777_10050 PF01476 LysM domain JC777_10065 PF01497 Periplasmic binding protein JC777_10070 PF01330 RuvA N terminal domain JC777_10070 PF07499 RuvA, C-terminal domain JC777_10075 PF05491 RuvB C-terminal winged helix domain JC777_10075 PF05496 Holliday junction DNA helicase RuvB P-loop domain JC777_10075 PF17864 RuvB AAA lid domain JC777_10080 PF11146 Protein of unknown function (DUF2905) JC777_10085 PF02547 Queuosine biosynthesis protein JC777_10090 PF01702 Queuine tRNA-ribosyltransferase JC777_10095 PF02699 Preprotein translocase subunit JC777_10115 PF14667 Polysaccharide biosynthesis C-terminal domain JC777_10115 PF01943 Polysaccharide biosynthesis protein JC777_10120 PF13797 Post-transcriptional regulator JC777_10125 PF07549 SecD/SecF GG Motif JC777_10125 PF02355 Protein export membrane protein JC777_10130 PF01545 Cation efflux family JC777_10130 PF16916 Dimerisation domain of Zinc Transporter JC777_10135 PF10141 Single-strand DNA-specific exonuclease, C terminal domain JC777_10135 PF01368 DHH family JC777_10135 PF02272 DHHA1 domain JC777_10135 PF17768 RecJ OB domain JC777_10140 PF00156 Phosphoribosyl transferase domain JC777_10145 PF02824 TGS domain JC777_10145 PF04607 Region found in RelA / SpoT proteins JC777_10145 PF13291 ACT domain JC777_10150 PF02580 D-Tyr-tRNA(Tyr) deacylase JC777_10170 PF03129 Anticodon binding domain JC777_10170 PF13393 Histidyl-tRNA synthetase JC777_10175 PF02938 GAD domain JC777_10175 PF00152 tRNA synthetases class II (D, K and N) JC777_10175 PF01336 OB-fold nucleic acid binding domain JC777_10180 PF00899 ThiF family JC777_10190 PF17853 GGDEF-like domain JC777_10190 PF12833 Helix-turn-helix domain JC777_10210 PF16193 AAA C-terminal domain JC777_10210 PF12002 MgsA AAA+ ATPase C terminal JC777_10210 PF05496 Holliday junction DNA helicase RuvB P-loop domain JC777_10215 PF02082 Transcriptional regulator JC777_10220 PF00266 Aminotransferase class-V JC777_10235 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain JC777_10235 PF13538 UvrD-like helicase C-terminal domain JC777_10235 PF14490 Helix-hairpin-helix containing domain JC777_10255 PF01594 AI-2E family transporter JC777_10260 PF01411 tRNA synthetases class II (A) JC777_10260 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JC777_10260 PF02272 DHHA1 domain JC777_10265 PF06135 IreB regulatory phosphoprotein JC777_10270 PF03652 Holliday junction resolvase JC777_10275 PF06949 Protein of unknown function (DUF1292) JC777_10280 PF02618 YceG-like family JC777_10285 PF01596 O-methyltransferase JC777_10290 PF01136 Peptidase family U32 JC777_10295 PF01136 Peptidase family U32 JC777_10295 PF16325 Peptidase family U32 C-terminal domain JC777_10300 PF00485 Phosphoribulokinase / Uridine kinase family JC777_10305 PF01272 Transcription elongation factor, GreA/GreB, C-term JC777_10305 PF03449 Transcription elongation factor, N-terminal JC777_10315 PF03717 Penicillin-binding Protein dimerisation domain JC777_10315 PF00905 Penicillin binding protein transpeptidase domain JC777_10330 PF10750 Protein of unknown function (DUF2536) JC777_10335 PF08241 Methyltransferase domain JC777_10340 PF01048 Phosphorylase superfamily JC777_10345 PF00291 Pyridoxal-phosphate dependent enzyme JC777_10350 PF01053 Cys/Met metabolism PLP-dependent enzyme JC777_10360 PF00356 Bacterial regulatory proteins, lacI family JC777_10380 PF07681 DoxX JC777_10385 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JC777_10390 PF01329 Pterin 4 alpha carbinolamine dehydratase JC777_10395 PF00351 Biopterin-dependent aromatic amino acid hydroxylase JC777_10420 PF00561 alpha/beta hydrolase fold JC777_10420 PF08386 TAP-like protein JC777_10425 PF00583 Acetyltransferase (GNAT) family JC777_10430 PF00245 Alkaline phosphatase JC777_10435 PF04607 Region found in RelA / SpoT proteins JC777_10440 PF00471 Ribosomal protein L33 JC777_10450 PF04542 Sigma-70 region 2 JC777_10450 PF04545 Sigma-70, region 4 JC777_10455 PF02666 Phosphatidylserine decarboxylase JC777_10470 PF01926 50S ribosome-binding GTPase JC777_10475 PF18317 Shikimate 5'-dehydrogenase C-terminal domain JC777_10475 PF01488 Shikimate / quinate 5-dehydrogenase JC777_10475 PF08501 Shikimate dehydrogenase substrate binding domain JC777_10480 PF01985 CRS1 / YhbY (CRM) domain JC777_10485 PF01467 Cytidylyltransferase-like JC777_10490 PF01966 HD domain JC777_10500 PF13649 Methyltransferase domain JC777_10505 PF03807 NADP oxidoreductase coenzyme F420-dependent JC777_10505 PF14748 Pyrroline-5-carboxylate reductase dimerisation JC777_10510 PF10531 SLBB domain JC777_10515 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JC777_10520 PF03772 Competence protein JC777_10520 PF13567 Domain of unknown function (DUF4131) JC777_10520 PF00753 Metallo-beta-lactamase superfamily JC777_10525 PF14141 YqzM-like protein JC777_10530 PF06144 DNA polymerase III, delta subunit JC777_10535 PF01649 Ribosomal protein S20 JC777_10540 PF03418 Germination protease JC777_10545 PF12438 Protein of unknown function (DUF3679) JC777_10550 PF00679 Elongation factor G C-terminus JC777_10550 PF00009 Elongation factor Tu GTP binding domain JC777_10550 PF03144 Elongation factor Tu domain 2 JC777_10550 PF06421 GTP-binding protein LepA C-terminus JC777_10555 PF01965 DJ-1/PfpI family JC777_10560 PF01638 HxlR-like helix-turn-helix JC777_10565 PF06969 HemN C-terminal domain JC777_10565 PF04055 Radical SAM superfamily JC777_10570 PF01628 HrcA protein C terminal domain JC777_10575 PF01025 GrpE JC777_10580 PF00012 Hsp70 protein JC777_10585 PF00226 DnaJ domain JC777_10585 PF01556 DnaJ C terminal domain JC777_10585 PF00684 DnaJ central domain JC777_10595 PF04452 RNA methyltransferase JC777_10600 PF04055 Radical SAM superfamily JC777_10600 PF01938 TRAM domain JC777_10600 PF00919 Uncharacterized protein family UPF0004 JC777_10605 PF01165 Ribosomal protein S21 JC777_10610 PF09424 Yqey-like protein JC777_10615 PF07873 YabP family JC777_10620 PF06898 Putative stage IV sporulation protein YqfD JC777_10625 PF02562 PhoH-like protein JC777_10630 PF07698 7TM receptor with intracellular HD hydrolase JC777_10630 PF07697 7TM-HD extracellular JC777_10630 PF01966 HD domain JC777_10635 PF02130 Uncharacterized protein family UPF0054 JC777_10640 PF01219 Prokaryotic diacylglycerol kinase JC777_10650 PF07650 KH domain JC777_10650 PF01926 50S ribosome-binding GTPase JC777_10660 PF02565 Recombination protein O C terminal JC777_10660 PF11967 Recombination protein O N terminal JC777_10665 PF08279 HTH domain JC777_10665 PF00571 CBS domain JC777_10670 PF03618 Kinase/pyrophosphorylase JC777_10675 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 JC777_10680 PF10410 DnaB-helicase binding domain of primase JC777_10680 PF08275 DNA primase catalytic core, N-terminal domain JC777_10680 PF01807 CHC2 zinc finger JC777_10685 PF03979 Sigma-70 factor, region 1.1 JC777_10685 PF00140 Sigma-70 factor, region 1.2 JC777_10685 PF04542 Sigma-70 region 2 JC777_10685 PF04545 Sigma-70, region 4 JC777_10685 PF04539 Sigma-70 region 3 JC777_10690 PF13442 Cytochrome C oxidase, cbb3-type, subunit III JC777_10695 PF04816 tRNA (adenine(22)-N(1))-methyltransferase JC777_10700 PF01784 NIF3 (NGG1p interacting factor 3) JC777_10705 PF02401 LytB protein JC777_10715 PF00270 DEAD/DEAH box helicase JC777_10715 PF00271 Helicase conserved C-terminal domain JC777_10720 PF01261 Xylose isomerase-like TIM barrel JC777_10730 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JC777_10730 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JC777_10735 PF00005 ABC transporter JC777_10740 PF00950 ABC 3 transport family JC777_10745 PF01475 Ferric uptake regulator family JC777_10750 PF04551 GcpE protein JC777_10770 PF02777 Iron/manganese superoxide dismutases, C-terminal domain JC777_10770 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain JC777_10775 PF07690 Major Facilitator Superfamily JC777_10780 PF03717 Penicillin-binding Protein dimerisation domain JC777_10780 PF00905 Penicillin binding protein transpeptidase domain JC777_10785 PF12849 PBP superfamily domain JC777_10790 PF00528 Binding-protein-dependent transport system inner membrane component JC777_10795 PF00528 Binding-protein-dependent transport system inner membrane component JC777_10800 PF00005 ABC transporter JC777_10805 PF01895 PhoU domain JC777_10810 PF00483 Nucleotidyl transferase JC777_10815 PF00471 Ribosomal protein L33 JC777_10820 PF01812 5-formyltetrahydrofolate cyclo-ligase family JC777_10825 PF06014 Bacterial protein of unknown function (DUF910) JC777_10830 PF00480 ROK family JC777_10835 PF10958 Protein of unknown function (DUF2759) JC777_10840 PF00753 Metallo-beta-lactamase superfamily JC777_10850 PF01022 Bacterial regulatory protein, arsR family JC777_10855 PF01053 Cys/Met metabolism PLP-dependent enzyme JC777_10860 PF01053 Cys/Met metabolism PLP-dependent enzyme JC777_10865 PF02219 Methylenetetrahydrofolate reductase JC777_10865 PF02574 Homocysteine S-methyltransferase JC777_10870 PF02574 Homocysteine S-methyltransferase JC777_10870 PF00809 Pterin binding enzyme JC777_10870 PF02607 B12 binding domain JC777_10870 PF02965 Vitamin B12 dependent methionine synthase, activation domain JC777_10870 PF02310 B12 binding domain JC777_10885 PF01966 HD domain JC777_10910 PF00375 Sodium:dicarboxylate symporter family JC777_10915 PF11117 Protein of unknown function (DUF2626) JC777_10925 PF00437 Type II/IV secretion system protein JC777_10930 PF00482 Type II secretion system (T2SS), protein F JC777_10955 PF01202 Shikimate kinase JC777_10960 PF14038 YqzE-like protein JC777_10980 PF11079 Bacterial protein YqhG of unknown function JC777_10985 PF00271 Helicase conserved C-terminal domain JC777_10985 PF00176 SNF2 family N-terminal domain JC777_10990 PF01571 Aminomethyltransferase folate-binding domain JC777_10990 PF08669 Glycine cleavage T-protein C-terminal barrel domain JC777_10995 PF02347 Glycine cleavage system P-protein JC777_11000 PF02347 Glycine cleavage system P-protein JC777_11015 PF00392 Bacterial regulatory proteins, gntR family JC777_11020 PF00005 ABC transporter JC777_11040 PF00893 Small Multidrug Resistance protein JC777_11045 PF00893 Small Multidrug Resistance protein JC777_11055 PF00356 Bacterial regulatory proteins, lacI family JC777_11055 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family JC777_11065 PF00581 Rhodanese-like domain JC777_11070 PF03099 Biotin/lipoate A/B protein ligase family JC777_11080 PF02742 Iron dependent repressor, metal binding and dimerisation domain JC777_11080 PF01325 Iron dependent repressor, N-terminal DNA binding domain JC777_11090 PF07136 Protein of unknown function (DUF1385) JC777_11095 PF11085 Conserved membrane protein YqhR JC777_11100 PF01220 Dehydroquinase class II JC777_11105 PF01321 Creatinase/Prolidase N-terminal domain JC777_11105 PF00557 Metallopeptidase family M24 JC777_11110 PF01132 Elongation factor P (EF-P) OB domain JC777_11110 PF08207 Elongation factor P (EF-P) KOW-like domain JC777_11110 PF09285 Elongation factor P, C-terminal JC777_11135 PF09548 Stage III sporulation protein AB (spore_III_AB) JC777_11140 PF06686 Stage III sporulation protein AC/AD protein family JC777_11145 PF06686 Stage III sporulation protein AC/AD protein family JC777_11150 PF09546 Stage III sporulation protein AE (spore_III_AE) JC777_11155 PF09581 Stage III sporulation protein AF (Spore_III_AF) JC777_11165 PF12685 SpoIIIAH-like protein JC777_11175 PF00364 Biotin-requiring enzyme JC777_11180 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JC777_11180 PF00289 Biotin carboxylase, N-terminal domain JC777_11180 PF02785 Biotin carboxylase C-terminal domain JC777_11185 PF03780 Asp23 family, cell envelope-related function JC777_11190 PF01029 NusB family JC777_11195 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain JC777_11195 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain JC777_11200 PF02601 Exonuclease VII, large subunit JC777_11200 PF13742 OB-fold nucleic acid binding domain JC777_11205 PF02609 Exonuclease VII small subunit JC777_11210 PF00348 Polyprenyl synthetase JC777_11215 PF13292 1-deoxy-D-xylulose-5-phosphate synthase JC777_11215 PF02780 Transketolase, C-terminal domain JC777_11215 PF02779 Transketolase, pyrimidine binding domain JC777_11220 PF01479 S4 domain JC777_11220 PF01728 FtsJ-like methyltransferase JC777_11225 PF01316 Arginine repressor, DNA binding domain JC777_11225 PF02863 Arginine repressor, C-terminal domain JC777_11230 PF13476 AAA domain JC777_11235 PF17820 PDZ domain JC777_11235 PF05580 SpoIVB peptidase S55 JC777_11245 PF00072 Response regulator receiver domain JC777_11245 PF08769 Sporulation initiation factor Spo0A C terminal JC777_11270 PF00005 ABC transporter JC777_11285 PF14174 YycC-like protein JC777_11290 PF03009 Glycerophosphoryl diester phosphodiesterase family JC777_11300 PF11118 Protein of unknown function (DUF2627) JC777_11305 PF00158 Sigma-54 interaction domain JC777_11305 PF02954 Bacterial regulatory protein, Fis family JC777_11305 PF00989 PAS fold JC777_11310 PF01515 Phosphate acetyl/butaryl transferase JC777_11315 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase JC777_11315 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain JC777_11320 PF00871 Acetokinase family JC777_11325 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JC777_11325 PF07992 Pyridine nucleotide-disulphide oxidoreductase JC777_11330 PF00676 Dehydrogenase E1 component JC777_11335 PF02779 Transketolase, pyrimidine binding domain JC777_11335 PF02780 Transketolase, C-terminal domain JC777_11340 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JC777_11340 PF00364 Biotin-requiring enzyme JC777_11340 PF02817 e3 binding domain JC777_11345 PF01098 Cell cycle protein JC777_11350 PF00293 NUDIX domain JC777_11350 PF09297 NADH pyrophosphatase zinc ribbon domain JC777_11355 PF11208 Protein of unknown function (DUF2992) JC777_11360 PF06491 Disulphide isomerase JC777_11365 PF00497 Bacterial extracellular solute-binding proteins, family 3 JC777_11370 PF00528 Binding-protein-dependent transport system inner membrane component JC777_11375 PF00005 ABC transporter JC777_11380 PF06081 Aromatic acid exporter family member 1 JC777_11380 PF11728 Putative aromatic acid exporter C-terminal domain JC777_11385 PF03734 L,D-transpeptidase catalytic domain JC777_11400 PF13302 Acetyltransferase (GNAT) domain JC777_11405 PF07687 Peptidase dimerisation domain JC777_11405 PF01546 Peptidase family M20/M25/M40 JC777_11410 PF11799 impB/mucB/samB family C-terminal domain JC777_11410 PF11798 IMS family HHH motif JC777_11410 PF00817 impB/mucB/samB family JC777_11415 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) JC777_11425 PF00753 Metallo-beta-lactamase superfamily JC777_11425 PF12706 Beta-lactamase superfamily domain JC777_11435 PF01842 ACT domain JC777_11435 PF03315 Serine dehydratase beta chain JC777_11440 PF03313 Serine dehydratase alpha chain JC777_11445 PF03807 NADP oxidoreductase coenzyme F420-dependent JC777_11445 PF14748 Pyrroline-5-carboxylate reductase dimerisation JC777_11450 PF00753 Metallo-beta-lactamase superfamily JC777_11455 PF00106 short chain dehydrogenase JC777_11465 PF01118 Semialdehyde dehydrogenase, NAD binding domain JC777_11465 PF02774 Semialdehyde dehydrogenase, dimerisation domain JC777_11470 PF01960 ArgJ family JC777_11475 PF00696 Amino acid kinase family JC777_11480 PF00202 Aminotransferase class-III JC777_11485 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JC777_11485 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JC777_11505 PF00149 Calcineurin-like phosphoesterase JC777_11505 PF02872 5'-nucleotidase, C-terminal domain JC777_11510 PF03553 Na+/H+ antiporter family JC777_11520 PF00202 Aminotransferase class-III JC777_11530 PF00155 Aminotransferase class I and II JC777_11535 PF00561 alpha/beta hydrolase fold JC777_11540 PF13847 Methyltransferase domain JC777_11545 PF06968 Biotin and Thiamin Synthesis associated domain JC777_11545 PF04055 Radical SAM superfamily JC777_11555 PF00885 6,7-dimethyl-8-ribityllumazine synthase JC777_11560 PF00925 GTP cyclohydrolase II JC777_11560 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase JC777_11565 PF00677 Lumazine binding domain JC777_11570 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JC777_11570 PF01872 RibD C-terminal domain JC777_11580 PF10827 Protein of unknown function (DUF2552) JC777_11585 PF12146 Serine aminopeptidase, S33 JC777_11590 PF00583 Acetyltransferase (GNAT) family JC777_11595 PF00356 Bacterial regulatory proteins, lacI family JC777_11600 PF13726 Na+-H+ antiporter family JC777_11600 PF03553 Na+/H+ antiporter family JC777_11605 PF12146 Serine aminopeptidase, S33 JC777_11615 PF02872 5'-nucleotidase, C-terminal domain JC777_11615 PF00746 LPXTG cell wall anchor motif JC777_11615 PF00149 Calcineurin-like phosphoesterase JC777_11615 PF00565 Staphylococcal nuclease homologue JC777_11625 PF04229 GrpB protein JC777_11625 PF13673 Acetyltransferase (GNAT) domain JC777_11630 PF00248 Aldo/keto reductase family JC777_11635 PF00248 Aldo/keto reductase family JC777_11640 PF13072 Mother cell inhibitor of FtsZ JC777_11645 PF00293 NUDIX domain JC777_11655 PF01944 Stage II sporulation protein M JC777_11660 PF01475 Ferric uptake regulator family JC777_11665 PF14004 Protein of unknown function (DUF4227) JC777_11670 PF00589 Phage integrase family JC777_11670 PF02899 Phage integrase, N-terminal SAM-like domain JC777_11675 PF13115 YtkA-like JC777_11680 PF01676 Metalloenzyme superfamily JC777_11685 PF01048 Phosphorylase superfamily JC777_11690 PF02885 Glycosyl transferase family, helical bundle domain JC777_11690 PF00591 Glycosyl transferase family, a/b domain JC777_11690 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain JC777_11695 PF01544 CorA-like Mg2+ transporter protein JC777_11700 PF00860 Permease family JC777_11710 PF01047 MarR family JC777_11730 PF00005 ABC transporter JC777_11735 PF00392 Bacterial regulatory proteins, gntR family JC777_11740 PF07943 Penicillin-binding protein 5, C-terminal domain JC777_11740 PF00768 D-alanyl-D-alanine carboxypeptidase JC777_11745 PF01740 STAS domain JC777_11750 PF13581 Histidine kinase-like ATPase domain JC777_11755 PF04542 Sigma-70 region 2 JC777_11755 PF04539 Sigma-70 region 3 JC777_11755 PF04545 Sigma-70, region 4 JC777_11760 PF00209 Sodium:neurotransmitter symporter family JC777_11770 PF12164 Stage V sporulation protein AA JC777_11775 PF13782 Stage V sporulation protein AB JC777_11780 PF03862 SpoVAC/SpoVAEB sporulation membrane protein JC777_11785 PF07451 Stage V sporulation protein AD (SpoVAD) JC777_11790 PF03862 SpoVAC/SpoVAEB sporulation membrane protein JC777_11795 PF14097 Stage V sporulation protein AE1 JC777_11800 PF03323 Bacillus/Clostridium GerA spore germination protein JC777_11810 PF06207 Protein of unknown function (DUF1002) JC777_11815 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD JC777_11820 PF00583 Acetyltransferase (GNAT) family JC777_11825 PF03745 Domain of unknown function (DUF309) JC777_11835 PF02616 Segregation and condensation protein ScpA JC777_11840 PF04079 Segregation and condensation complex subunit ScpB JC777_11850 PF01979 Amidohydrolase family JC777_11855 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase JC777_11860 PF00392 Bacterial regulatory proteins, gntR family JC777_11860 PF07702 UTRA domain JC777_11870 PF03123 CAT RNA binding domain JC777_11870 PF00874 PRD domain JC777_11875 PF02378 Phosphotransferase system, EIIC JC777_11875 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JC777_11875 PF00367 phosphotransferase system, EIIB JC777_11880 PF00381 PTS HPr component phosphorylation site JC777_11885 PF05524 PEP-utilising enzyme, N-terminal JC777_11885 PF00391 PEP-utilising enzyme, mobile domain JC777_11885 PF02896 PEP-utilising enzyme, TIM barrel domain JC777_11900 PF00881 Nitroreductase family JC777_11905 PF00990 Diguanylate cyclase, GGDEF domain JC777_11905 PF08448 PAS fold JC777_11910 PF00144 Beta-lactamase JC777_11915 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase JC777_11915 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JC777_11930 PF03079 ARD/ARD' family JC777_11935 PF00596 Class II Aldolase and Adducin N-terminal domain JC777_11945 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain JC777_11945 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain JC777_11950 PF00155 Aminotransferase class I and II JC777_11955 PF00795 Carbon-nitrogen hydrolase JC777_11960 PF01636 Phosphotransferase enzyme family JC777_11965 PF01008 Initiation factor 2 subunit family JC777_11980 PF03551 Transcriptional regulator PadR-like family JC777_12005 PF00108 Thiolase, N-terminal domain JC777_12005 PF02803 Thiolase, C-terminal domain JC777_12020 PF06271 RDD family JC777_12030 PF02903 Alpha amylase, N-terminal ig-like domain JC777_12030 PF16657 Maltogenic Amylase, C-terminal domain JC777_12030 PF00128 Alpha amylase, catalytic domain JC777_12035 PF00356 Bacterial regulatory proteins, lacI family JC777_12035 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family JC777_12040 PF00155 Aminotransferase class I and II JC777_12050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC777_12050 PF00512 His Kinase A (phospho-acceptor) domain JC777_12060 PF14040 Deoxyribonuclease NucA/NucB JC777_12070 PF08267 Cobalamin-independent synthase, N-terminal domain JC777_12070 PF01717 Cobalamin-independent synthase, Catalytic domain JC777_12075 PF07690 Major Facilitator Superfamily JC777_12095 PF01522 Polysaccharide deacetylase JC777_12105 PF14177 YkyB-like protein JC777_12115 PF17941 Polyphosphate kinase C-terminal domain 1 JC777_12115 PF13089 Polyphosphate kinase N-terminal domain JC777_12115 PF13090 Polyphosphate kinase C-terminal domain 2 JC777_12115 PF02503 Polyphosphate kinase middle domain JC777_12125 PF10518 TAT (twin-arginine translocation) pathway signal sequence JC777_12125 PF00149 Calcineurin-like phosphoesterase JC777_12135 PF00563 EAL domain JC777_12135 PF10388 EAL-domain associated signalling protein domain JC777_12150 PF08796 Protein of unknown function (DUF1797) JC777_12160 PF04308 Ribonuclease H-like JC777_12175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JC777_12175 PF03466 LysR substrate binding domain JC777_12180 PF14602 Hexapeptide repeat of succinyl-transferase JC777_12180 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal JC777_12180 PF00132 Bacterial transferase hexapeptide (six repeats) JC777_12185 PF07687 Peptidase dimerisation domain JC777_12185 PF01546 Peptidase family M20/M25/M40 JC777_12195 PF02080 TrkA-C domain JC777_12195 PF02254 TrkA-N domain JC777_12200 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain JC777_12200 PF00753 Metallo-beta-lactamase superfamily JC777_12200 PF17770 Ribonuclease J C-terminal domain JC777_12205 PF07288 Protein of unknown function (DUF1447) JC777_12215 PF01327 Polypeptide deformylase JC777_12225 PF00676 Dehydrogenase E1 component JC777_12230 PF02779 Transketolase, pyrimidine binding domain JC777_12230 PF02780 Transketolase, C-terminal domain JC777_12235 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JC777_12235 PF00364 Biotin-requiring enzyme JC777_12235 PF02817 e3 binding domain JC777_12240 PF07992 Pyridine nucleotide-disulphide oxidoreductase JC777_12240 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JC777_12265 PF13790 SR1 protein JC777_12275 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain JC777_12275 PF01276 Orn/Lys/Arg decarboxylase, major domain JC777_12280 PF05256 Uncharacterised protein family (UPF0223) JC777_12285 PF06335 Protein of unknown function (DUF1054) JC777_12295 PF00459 Inositol monophosphatase family JC777_12305 PF00679 Elongation factor G C-terminus JC777_12305 PF14492 Elongation Factor G, domain II JC777_12305 PF00009 Elongation factor Tu GTP binding domain JC777_12305 PF03144 Elongation factor Tu domain 2 JC777_12310 PF14036 YlaH-like protein JC777_12320 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) JC777_12330 PF02562 PhoH-like protein JC777_12330 PF13638 PIN domain JC777_12340 PF07408 Protein of unknown function (DUF1507) JC777_12345 PF01098 Cell cycle protein JC777_12350 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JC777_12350 PF02785 Biotin carboxylase C-terminal domain JC777_12350 PF00289 Biotin carboxylase, N-terminal domain JC777_12350 PF00682 HMGL-like JC777_12350 PF02436 Conserved carboxylase domain JC777_12350 PF00364 Biotin-requiring enzyme JC777_12355 PF02628 Cytochrome oxidase assembly protein JC777_12360 PF01040 UbiA prenyltransferase family JC777_12365 PF00116 Cytochrome C oxidase subunit II, periplasmic domain JC777_12365 PF02790 Cytochrome C oxidase subunit II, transmembrane domain JC777_12365 PF00034 Cytochrome c JC777_12370 PF00115 Cytochrome C and Quinol oxidase polypeptide I JC777_12375 PF00510 Cytochrome c oxidase subunit III JC777_12380 PF03626 Prokaryotic Cytochrome C oxidase subunit IV JC777_12385 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) JC777_12390 PF08868 YugN-like family JC777_12395 PF00188 Cysteine-rich secretory protein family JC777_12395 PF14504 CAP-associated N-terminal JC777_12400 PF14071 Putative coat protein JC777_12405 PF14003 YlbE-like protein JC777_12410 PF00300 Histidine phosphatase superfamily (branch 1) JC777_12415 PF06133 Control of competence regulator ComK, YlbF/YmcA JC777_12420 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) JC777_12435 PF01467 Cytidylyltransferase-like JC777_12440 PF07670 Nucleoside recognition JC777_12445 PF01734 Patatin-like phospholipase JC777_12450 PF13180 PDZ domain JC777_12450 PF05362 Lon protease (S16) C-terminal proteolytic domain JC777_12455 PF05636 HIGH Nucleotidyl Transferase JC777_12460 PF14659 Phage integrase, N-terminal SAM-like domain JC777_12460 PF00589 Phage integrase family JC777_12465 PF01381 Helix-turn-helix JC777_12480 PF01381 Helix-turn-helix JC777_12520 PF09588 YqaJ-like viral recombinase domain JC777_12530 PF03837 RecT family JC777_12560 PF00692 dUTPase JC777_12665 PF03354 Phage Terminase JC777_12740 PF01510 N-acetylmuramoyl-L-alanine amidase JC777_12740 PF13457 GW (Gly-Tryp) dipeptide domain JC777_12775 PF02620 Large ribosomal RNA subunit accumulation protein YceD JC777_12780 PF01783 Ribosomal L32p protein family JC777_12790 PF00583 Acetyltransferase (GNAT) family JC777_12795 PF08546 Ketopantoate reductase PanE/ApbA C terminal JC777_12795 PF02558 Ketopantoate reductase PanE/ApbA JC777_12800 PF10079 Bacillithiol biosynthesis BshC JC777_12805 PF01795 MraW methylase family JC777_12810 PF04977 Septum formation initiator JC777_12815 PF03793 PASTA domain JC777_12815 PF03717 Penicillin-binding Protein dimerisation domain JC777_12815 PF00905 Penicillin binding protein transpeptidase domain JC777_12820 PF03717 Penicillin-binding Protein dimerisation domain JC777_12820 PF03793 PASTA domain JC777_12820 PF00905 Penicillin binding protein transpeptidase domain JC777_12825 PF08245 Mur ligase middle domain JC777_12825 PF02875 Mur ligase family, glutamate ligase domain JC777_12825 PF01225 Mur ligase family, catalytic domain JC777_12830 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 JC777_12830 PF00953 Glycosyl transferase family 4 JC777_12835 PF02875 Mur ligase family, glutamate ligase domain JC777_12835 PF08245 Mur ligase middle domain JC777_12840 PF01098 Cell cycle protein JC777_12845 PF04101 Glycosyltransferase family 28 C-terminal domain JC777_12845 PF03033 Glycosyltransferase family 28 N-terminal domain JC777_12850 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain JC777_12850 PF01565 FAD binding domain JC777_12855 PF08478 POTRA domain, FtsQ-type JC777_12855 PF03799 Cell division protein FtsQ JC777_12860 PF02491 SHS2 domain inserted in FTSA JC777_12865 PF12327 FtsZ family, C-terminal domain JC777_12865 PF00091 Tubulin/FtsZ family, GTPase domain JC777_12870 PF03419 Sporulation factor SpoIIGA JC777_12875 PF04545 Sigma-70, region 4 JC777_12875 PF04542 Sigma-70 region 2 JC777_12880 PF04545 Sigma-70, region 4 JC777_12880 PF04539 Sigma-70 region 3 JC777_12880 PF04542 Sigma-70 region 2 JC777_12885 PF05239 PRC-barrel domain JC777_12890 PF02578 Multi-copper polyphenol oxidoreductase laccase JC777_12895 PF01168 Alanine racemase, N-terminal domain JC777_12900 PF04472 Cell division protein SepF JC777_12905 PF02325 YGGT family JC777_12910 PF17774 Putative RNA-binding domain in YlmH JC777_12910 PF01479 S4 domain JC777_12915 PF05103 DivIVA protein JC777_12920 PF00133 tRNA synthetases class I (I, L, M and V) JC777_12920 PF08264 Anticodon-binding domain of tRNA JC777_12920 PF06827 Zinc finger found in FPG and IleRS JC777_12930 PF01252 Signal peptidase (SPase) II JC777_12935 PF00849 RNA pseudouridylate synthase JC777_12935 PF01479 S4 domain JC777_12940 PF00156 Phosphoribosyl transferase domain JC777_12945 PF00860 Permease family JC777_12950 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JC777_12950 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JC777_12955 PF01979 Amidohydrolase family JC777_12960 PF00117 Glutamine amidotransferase class-I JC777_12960 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain JC777_12965 PF02142 MGS-like domain JC777_12965 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JC777_12965 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain JC777_12970 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B JC777_12970 PF00970 Oxidoreductase FAD-binding domain JC777_12975 PF01180 Dihydroorotate dehydrogenase JC777_12980 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family JC777_12985 PF00156 Phosphoribosyl transferase domain JC777_13005 PF05670 NFACT protein RNA binding domain JC777_13010 PF00689 Cation transporting ATPase, C-terminus JC777_13010 PF00690 Cation transporter/ATPase, N-terminus JC777_13015 PF08340 Domain of unknown function (DUF1732) JC777_13015 PF03755 YicC-like family, N-terminal region JC777_13020 PF04025 Domain of unknown function (DUF370) JC777_13025 PF00625 Guanylate kinase JC777_13030 PF01192 RNA polymerase Rpb6 JC777_13035 PF04127 DNA / pantothenate metabolism flavoprotein JC777_13035 PF02441 Flavoprotein JC777_13040 PF17764 3′ DNA-binding domain (3′BD) JC777_13040 PF04851 Type III restriction enzyme, res subunit JC777_13040 PF00271 Helicase conserved C-terminal domain JC777_13040 PF18319 PriA DNA helicase Cys-rich region (CRR) domain JC777_13040 PF18074 Primosomal protein N C-terminal domain JC777_13045 PF01327 Polypeptide deformylase JC777_13050 PF00551 Formyl transferase JC777_13050 PF02911 Formyl transferase, C-terminal domain JC777_13055 PF01189 16S rRNA methyltransferase RsmB/F JC777_13055 PF01029 NusB family JC777_13060 PF04055 Radical SAM superfamily JC777_13070 PF03793 PASTA domain JC777_13070 PF00069 Protein kinase domain JC777_13075 PF03193 RsgA GTPase JC777_13075 PF16745 RsgA N-terminal domain JC777_13080 PF00834 Ribulose-phosphate 3 epimerase family JC777_13085 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain JC777_13085 PF04263 Thiamin pyrophosphokinase, catalytic domain JC777_13090 PF08183 Stage V sporulation protein family JC777_13095 PF00830 Ribosomal L28 family JC777_13100 PF03780 Asp23 family, cell envelope-related function JC777_13105 PF13684 Dihydroxyacetone kinase family JC777_13105 PF02734 DAK2 domain JC777_13110 PF17191 RecG wedge domain JC777_13110 PF00271 Helicase conserved C-terminal domain JC777_13110 PF00270 DEAD/DEAH box helicase JC777_13115 PF03061 Thioesterase superfamily JC777_13120 PF02504 Fatty acid synthesis protein JC777_13125 PF00698 Acyl transferase domain JC777_13135 PF00550 Phosphopantetheine attachment site JC777_13140 PF00035 Double-stranded RNA binding motif JC777_13140 PF14622 Ribonuclease-III-like JC777_13145 PF02463 RecF/RecN/SMC N terminal domain JC777_13145 PF06470 SMC proteins Flexible Hinge Domain JC777_13150 PF02881 SRP54-type protein, helical bundle domain JC777_13150 PF00448 SRP54-type protein, GTPase domain JC777_13155 PF04297 Putative helix-turn-helix protein, YlxM / p13 like JC777_13160 PF00448 SRP54-type protein, GTPase domain JC777_13160 PF02881 SRP54-type protein, helical bundle domain JC777_13160 PF02978 Signal peptide binding domain JC777_13165 PF00886 Ribosomal protein S16 JC777_13175 PF05239 PRC-barrel domain JC777_13175 PF01782 RimM N-terminal domain JC777_13180 PF01746 tRNA (Guanine-1)-methyltransferase JC777_13185 PF01245 Ribosomal protein L19 JC777_13190 PF10502 Signal peptidase, peptidase S26 JC777_13195 PF01926 50S ribosome-binding GTPase JC777_13200 PF01351 Ribonuclease HII JC777_13205 PF08442 ATP-grasp domain JC777_13205 PF00549 CoA-ligase JC777_13210 PF02629 CoA binding domain JC777_13210 PF00549 CoA-ligase JC777_13215 PF02481 DNA recombination-mediator protein A JC777_13220 PF01131 DNA topoisomerase JC777_13220 PF01751 Toprim domain JC777_13220 PF01396 Topoisomerase DNA binding C4 zinc finger JC777_13225 PF01134 Glucose inhibited division protein A JC777_13230 PF00589 Phage integrase family JC777_13230 PF02899 Phage integrase, N-terminal SAM-like domain JC777_13235 PF00227 Proteasome subunit JC777_13240 PF07724 AAA domain (Cdc48 subfamily) JC777_13240 PF10431 C-terminal, D2-small domain, of ClpB protein JC777_13245 PF06018 CodY GAF-like domain JC777_13245 PF08222 CodY helix-turn-helix domain JC777_13250 PF00318 Ribosomal protein S2 JC777_13255 PF00889 Elongation factor TS JC777_13260 PF00696 Amino acid kinase family JC777_13265 PF01765 Ribosome recycling factor JC777_13270 PF01255 Putative undecaprenyl diphosphate synthase JC777_13280 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain JC777_13280 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase JC777_13280 PF13288 DXP reductoisomerase C-terminal domain JC777_13285 PF13180 PDZ domain JC777_13285 PF02163 Peptidase family M50 JC777_13290 PF04073 Aminoacyl-tRNA editing domain JC777_13290 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JC777_13290 PF03129 Anticodon binding domain JC777_13295 PF14480 DNA polymerase III polC-type N-terminus I JC777_13295 PF11490 DNA polymerase III polC-type N-terminus II JC777_13295 PF07733 Bacterial DNA polymerase III alpha NTPase domain JC777_13295 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JC777_13295 PF14579 Helix-hairpin-helix motif JC777_13295 PF02811 PHP domain JC777_13295 PF00929 Exonuclease JC777_13300 PF02576 RimP N-terminal domain JC777_13300 PF17384 RimP C-terminal SH3 domain JC777_13305 PF13184 NusA-like KH domain JC777_13305 PF08529 NusA N-terminal domain JC777_13305 PF00575 S1 RNA binding domain JC777_13310 PF04296 Protein of unknown function (DUF448) JC777_13315 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family JC777_13320 PF11987 Translation-initiation factor 2 JC777_13320 PF00009 Elongation factor Tu GTP binding domain JC777_13320 PF04760 Translation initiation factor IF-2, N-terminal region JC777_13325 PF04456 Protein of unknown function (DUF503) JC777_13330 PF02033 Ribosome-binding factor A JC777_13335 PF16198 tRNA pseudouridylate synthase B C-terminal domain JC777_13335 PF01509 TruB family pseudouridylate synthase (N terminal domain) JC777_13340 PF06574 FAD synthetase JC777_13340 PF01687 Riboflavin kinase JC777_13345 PF00312 Ribosomal protein S15 JC777_13350 PF00013 KH domain JC777_13350 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain JC777_13350 PF01138 3' exoribonuclease family, domain 1 JC777_13350 PF03725 3' exoribonuclease family, domain 2 JC777_13350 PF00575 S1 RNA binding domain JC777_13355 PF01522 Polysaccharide deacetylase JC777_13360 PF00675 Insulinase (Peptidase family M16) JC777_13360 PF05193 Peptidase M16 inactive domain JC777_13365 PF05239 PRC-barrel domain JC777_13370 PF01262 Alanine dehydrogenase/PNT, C-terminal domain JC777_13370 PF16924 Dipicolinate synthase subunit A N-terminal domain JC777_13375 PF02441 Flavoprotein JC777_13380 PF01118 Semialdehyde dehydrogenase, NAD binding domain JC777_13380 PF02774 Semialdehyde dehydrogenase, dimerisation domain JC777_13385 PF00696 Amino acid kinase family JC777_13385 PF13840 ACT domain JC777_13390 PF00701 Dihydrodipicolinate synthetase family JC777_13405 PF00753 Metallo-beta-lactamase superfamily JC777_13405 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain JC777_13405 PF17770 Ribonuclease J C-terminal domain JC777_13430 PF00574 Clp protease JC777_13445 PF07282 Putative transposase DNA-binding domain JC777_13445 PF12323 Helix-turn-helix domain JC777_13445 PF01385 Probable transposase JC777_13450 PF01580 FtsK/SpoIIIE family JC777_13450 PF17854 FtsK alpha domain JC777_13450 PF09397 Ftsk gamma domain JC777_13455 PF00392 Bacterial regulatory proteins, gntR family JC777_13455 PF07702 UTRA domain JC777_13460 PF02608 ABC transporter substrate-binding protein PnrA-like JC777_13465 PF00005 ABC transporter JC777_13470 PF02653 Branched-chain amino acid transport system / permease component JC777_13475 PF02653 Branched-chain amino acid transport system / permease component JC777_13480 PF05193 Peptidase M16 inactive domain JC777_13485 PF00675 Insulinase (Peptidase family M16) JC777_13485 PF05193 Peptidase M16 inactive domain JC777_13495 PF11588 Protein of unknown function (DUF3243) JC777_13505 PF11868 Protein of unknown function (DUF3388) JC777_13510 PF13464 Domain of unknown function (DUF4115) JC777_13515 PF01066 CDP-alcohol phosphatidyltransferase JC777_13520 PF02464 Competence-damaged protein JC777_13520 PF00994 Probable molybdopterin binding domain JC777_13520 PF18146 Damage-inducible protein CinA KH domain JC777_13525 PF00154 recA bacterial DNA recombination protein JC777_13530 PF01966 HD domain JC777_13530 PF12072 Domain of unknown function (DUF3552) JC777_13530 PF00013 KH domain JC777_13535 PF13277 YmdB-like protein JC777_13540 PF04232 Stage V sporulation protein S (SpoVS) JC777_13545 PF01244 Membrane dipeptidase (Peptidase family M19) JC777_13550 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg JC777_13550 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase JC777_13550 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II JC777_13555 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JC777_13560 PF00919 Uncharacterized protein family UPF0004 JC777_13560 PF01938 TRAM domain JC777_13560 PF04055 Radical SAM superfamily JC777_13565 PF06133 Control of competence regulator ComK, YlbF/YmcA JC777_13570 PF10628 Outer spore coat protein E (CotE) JC777_13575 PF01624 MutS domain I JC777_13575 PF05188 MutS domain II JC777_13575 PF05192 MutS domain III JC777_13575 PF05190 MutS family domain IV JC777_13575 PF00488 MutS domain V JC777_13580 PF01119 DNA mismatch repair protein, C-terminal domain JC777_13580 PF08676 MutL C terminal dimerisation domain JC777_13590 PF00324 Amino acid permease JC777_13600 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JC777_13610 PF07687 Peptidase dimerisation domain JC777_13610 PF01546 Peptidase family M20/M25/M40 JC777_13615 PF10282 Lactonase, 7-bladed beta-propeller JC777_13620 PF01497 Periplasmic binding protein JC777_13625 PF01032 FecCD transport family JC777_13630 PF01032 FecCD transport family JC777_13635 PF00005 ABC transporter JC777_13640 PF00756 Putative esterase JC777_13645 PF02583 Metal-sensitive transcriptional repressor JC777_13650 PF00216 Bacterial DNA-binding protein JC777_13655 PF01226 Formate/nitrite transporter JC777_13675 PF04238 Protein of unknown function (DUF420) JC777_13680 PF00455 DeoR C terminal sensor domain JC777_13680 PF08220 DeoR-like helix-turn-helix domain JC777_13685 PF00294 pfkB family carbohydrate kinase JC777_13690 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JC777_13690 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JC777_13695 PF06725 3D domain JC777_13695 PF01476 LysM domain JC777_13710 PF17209 Hfq protein JC777_13725 PF00004 ATPase family associated with various cellular activities (AAA) JC777_13725 PF17866 AAA lid domain JC777_13735 PF03458 UPF0126 domain JC777_13740 PF16360 GTP-binding GTPase Middle Region JC777_13740 PF13167 GTP-binding GTPase N-terminal JC777_13740 PF01926 50S ribosome-binding GTPase JC777_13745 PF06838 Methionine gamma-lyase JC777_13750 PF13411 MerR HTH family regulatory protein JC777_13755 PF03951 Glutamine synthetase, beta-Grasp domain JC777_13755 PF00120 Glutamine synthetase, catalytic domain JC777_13805 PF00579 tRNA synthetases class I (W and Y) JC777_13815 PF01925 Sulfite exporter TauE/SafE JC777_13830 PF00155 Aminotransferase class I and II JC777_13830 PF00392 Bacterial regulatory proteins, gntR family JC777_13850 PF01022 Bacterial regulatory protein, arsR family JC777_13860 PF00144 Beta-lactamase JC777_13860 PF11954 Domain of unknown function (DUF3471) JC777_13865 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system JC777_13870 PF00872 Transposase, Mutator family JC777_13875 PF00872 Transposase, Mutator family JC777_13915 PF03551 Transcriptional regulator PadR-like family JC777_13930 PF01726 LexA DNA binding domain JC777_13930 PF00717 Peptidase S24-like JC777_13935 PF00239 Resolvase, N terminal domain JC777_13940 PF05979 Bacterial protein of unknown function (DUF896) JC777_13945 PF00149 Calcineurin-like phosphoesterase JC777_13945 PF02872 5'-nucleotidase, C-terminal domain JC777_13955 PF00005 ABC transporter JC777_13960 PF00528 Binding-protein-dependent transport system inner membrane component JC777_13965 PF00528 Binding-protein-dependent transport system inner membrane component JC777_13970 PF00456 Transketolase, thiamine diphosphate binding domain JC777_13970 PF02780 Transketolase, C-terminal domain JC777_13970 PF02779 Transketolase, pyrimidine binding domain JC777_13975 PF10747 Sporulation inhibitor of replication protein SirA JC777_13980 PF03672 Uncharacterised protein family (UPF0154) JC777_13985 PF00005 ABC transporter JC777_13985 PF00664 ABC transporter transmembrane region JC777_13990 PF00005 ABC transporter JC777_13990 PF00664 ABC transporter transmembrane region JC777_14005 PF01471 Putative peptidoglycan binding domain JC777_14005 PF01510 N-acetylmuramoyl-L-alanine amidase JC777_14015 PF01925 Sulfite exporter TauE/SafE JC777_14025 PF00324 Amino acid permease JC777_14035 PF01546 Peptidase family M20/M25/M40 JC777_14040 PF04172 LrgB-like family JC777_14045 PF03788 LrgA family JC777_14050 PF03466 LysR substrate binding domain JC777_14050 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JC777_14055 PF07687 Peptidase dimerisation domain JC777_14055 PF01546 Peptidase family M20/M25/M40 JC777_14065 PF02683 Cytochrome C biogenesis protein transmembrane region JC777_14070 PF07301 Protein of unknown function (DUF1453) JC777_14075 PF11084 Protein of unknown function (DUF2621) JC777_14085 PF09021 HutP JC777_14090 PF00221 Aromatic amino acid lyase JC777_14095 PF01175 Urocanase Rossmann-like domain JC777_14095 PF17392 Urocanase C-terminal domain JC777_14095 PF17391 Urocanase N-terminal domain JC777_14100 PF01979 Amidohydrolase family JC777_14105 PF00491 Arginase family JC777_14110 PF00474 Sodium:solute symporter family JC777_14115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC777_14115 PF00989 PAS fold JC777_14115 PF00512 His Kinase A (phospho-acceptor) domain JC777_14115 PF13426 PAS domain JC777_14115 PF13188 PAS domain JC777_14125 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JC777_14125 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JC777_14135 PF01510 N-acetylmuramoyl-L-alanine amidase JC777_14160 PF01554 MatE JC777_14175 PF13936 Helix-turn-helix domain JC777_14175 PF00665 Integrase core domain JC777_14185 PF12802 MarR family JC777_14195 PF11337 Protein of unknown function (DUF3139) JC777_14265 PF00501 AMP-binding enzyme JC777_14265 PF13193 AMP-binding enzyme C-terminal domain JC777_14270 PF02272 DHHA1 domain JC777_14270 PF01411 tRNA synthetases class II (A) JC777_14270 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JC777_14280 PF10787 Uncharacterised protein from bacillus cereus group JC777_14290 PF08179 Small acid-soluble spore protein P family JC777_14300 PF01522 Polysaccharide deacetylase JC777_14310 PF00330 Aconitase family (aconitate hydratase) JC777_14310 PF00694 Aconitase C-terminal domain JC777_14320 PF13443 Cro/C1-type HTH DNA-binding domain JC777_14325 PF00578 AhpC/TSA family JC777_14330 PF00929 Exonuclease JC777_14330 PF01336 OB-fold nucleic acid binding domain JC777_14330 PF14579 Helix-hairpin-helix motif JC777_14330 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JC777_14330 PF07733 Bacterial DNA polymerase III alpha NTPase domain JC777_14330 PF11490 DNA polymerase III polC-type N-terminus II JC777_14330 PF02811 PHP domain JC777_14335 PF13040 Fur-regulated basic protein B JC777_14340 PF08177 Small acid-soluble spore protein N family JC777_14350 PF00704 Glycosyl hydrolases family 18 JC777_14350 PF01476 LysM domain JC777_14355 PF03061 Thioesterase superfamily JC777_14360 PF01521 Iron-sulphur cluster biosynthesis JC777_14365 PF02660 Glycerol-3-phosphate acyltransferase JC777_14370 PF13597 Anaerobic ribonucleoside-triphosphate reductase JC777_14370 PF03477 ATP cone domain JC777_14375 PF04055 Radical SAM superfamily JC777_14380 PF00072 Response regulator receiver domain JC777_14380 PF00486 Transcriptional regulatory protein, C terminal JC777_14385 PF13180 PDZ domain JC777_14390 PF13380 CoA binding domain JC777_14395 PF00204 DNA gyrase B JC777_14395 PF01751 Toprim domain JC777_14395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC777_14395 PF00986 DNA gyrase B subunit, carboxyl terminus JC777_14400 PF00521 DNA gyrase/topoisomerase IV, subunit A JC777_14400 PF03989 DNA gyrase C-terminal domain, beta-propeller JC777_14405 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JC777_14405 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JC777_14410 PF00375 Sodium:dicarboxylate symporter family JC777_14415 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JC777_14420 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JC777_14425 PF08241 Methyltransferase domain JC777_14460 PF00892 EamA-like transporter family JC777_14465 PF02681 Divergent PAP2 family JC777_14470 PF13249 Squalene-hopene cyclase N-terminal domain JC777_14470 PF13243 Squalene-hopene cyclase C-terminal domain JC777_14475 PF14151 YfhD-like protein JC777_14480 PF00171 Aldehyde dehydrogenase family JC777_14485 PF06196 Protein of unknown function (DUF997) JC777_14490 PF00474 Sodium:solute symporter family JC777_14505 PF01471 Putative peptidoglycan binding domain JC777_14505 PF08924 Domain of unknown function (DUF1906) JC777_14510 PF01156 Inosine-uridine preferring nucleoside hydrolase JC777_14520 PF14698 Argininosuccinate lyase C-terminal JC777_14520 PF00206 Lyase JC777_14525 PF00106 short chain dehydrogenase JC777_14535 PF00313 'Cold-shock' DNA-binding domain JC777_14540 PF00082 Subtilase family JC777_14560 PF00589 Phage integrase family JC777_14560 PF14659 Phage integrase, N-terminal SAM-like domain JC777_14600 PF01695 IstB-like ATP binding protein JC777_14600 PF07319 Primosomal protein DnaI N-terminus JC777_14680 PF01367 5'-3' exonuclease, C-terminal SAM fold JC777_14680 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain JC777_14680 PF00476 DNA polymerase family A JC777_14680 PF01612 3'-5' exonuclease JC777_14700 PF02075 Crossover junction endodeoxyribonuclease RuvC JC777_14750 PF00145 C-5 cytosine-specific DNA methylase JC777_14760 PF01555 DNA methylase JC777_14895 PF04688 SPP1 phage holin JC777_14925 PF13039 Protein of unknown function (DUF3900) JC777_14925 PF13037 Domain of unknown function (DUF3898) JC777_14935 PF04294 VanW like protein JC777_14940 PF02308 MgtC family JC777_14945 PF02913 FAD linked oxidases, C-terminal domain JC777_14945 PF01565 FAD binding domain JC777_14950 PF02696 Uncharacterized ACR, YdiU/UPF0061 family JC777_14955 PF01447 Thermolysin metallopeptidase, catalytic domain JC777_14955 PF07504 Fungalysin/Thermolysin Propeptide Motif JC777_14955 PF02868 Thermolysin metallopeptidase, alpha-helical domain JC777_14955 PF03413 Peptidase propeptide and YPEB domain JC777_14960 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading JC777_14980 PF08447 PAS fold JC777_14980 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JC777_14980 PF13426 PAS domain JC777_14990 PF13302 Acetyltransferase (GNAT) domain JC777_14995 PF03009 Glycerophosphoryl diester phosphodiesterase family JC777_15005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JC777_15005 PF03466 LysR substrate binding domain JC777_15010 PF07690 Major Facilitator Superfamily JC777_15015 PF01432 Peptidase family M3 JC777_15015 PF08439 Oligopeptidase F JC777_15025 PF00488 MutS domain V JC777_15025 PF01713 Smr domain JC777_15035 PF03600 Citrate transporter JC777_15040 PF08830 Protein of unknown function (DUF1806) JC777_15045 PF02585 GlcNAc-PI de-N-acetylase JC777_15080 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal JC777_15080 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III JC777_15125 PF12704 MacB-like periplasmic core domain JC777_15125 PF00005 ABC transporter JC777_15125 PF02687 FtsX-like permease family JC777_15190 PF00005 ABC transporter JC777_15190 PF02687 FtsX-like permease family JC777_15190 PF12704 MacB-like periplasmic core domain JC777_15240 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain JC777_15240 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain JC777_15240 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain JC777_15295 PF02567 Phenazine biosynthesis-like protein JC777_15310 PF06906 Protein of unknown function (DUF1272) JC777_15315 PF13411 MerR HTH family regulatory protein JC777_15320 PF01595 Cyclin M transmembrane N-terminal domain JC777_15320 PF03471 Transporter associated domain JC777_15320 PF00571 CBS domain JC777_15330 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JC777_15335 PF06039 Malate:quinone oxidoreductase (Mqo) JC777_15340 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JC777_15340 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JC777_15345 PF06445 GyrI-like small molecule binding domain JC777_15350 PF07690 Major Facilitator Superfamily JC777_15370 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase JC777_15370 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain JC777_15370 PF13288 DXP reductoisomerase C-terminal domain JC777_15385 PF13350 Tyrosine phosphatase family JC777_15405 PF00005 ABC transporter JC777_15420 PF04073 Aminoacyl-tRNA editing domain JC777_15445 PF00005 ABC transporter JC777_15455 PF14256 YwiC-like protein JC777_15475 PF02667 Short chain fatty acid transporter JC777_15480 PF00144 Beta-lactamase JC777_15485 PF07690 Major Facilitator Superfamily JC777_15490 PF01047 MarR family JC777_15495 PF00561 alpha/beta hydrolase fold JC777_15505 PF07690 Major Facilitator Superfamily JC777_15510 PF14044 NETI protein JC777_15655 PF07537 CamS sex pheromone cAM373 precursor JC777_15670 PF00266 Aminotransferase class-V JC777_15675 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JC777_15675 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JC777_15675 PF01842 ACT domain JC777_15685 PF01636 Phosphotransferase enzyme family JC777_15690 PF13439 Glycosyltransferase Family 4 JC777_15690 PF00534 Glycosyl transferases group 1 JC777_15710 PF13439 Glycosyltransferase Family 4 JC777_15710 PF00534 Glycosyl transferases group 1 JC777_15715 PF01370 NAD dependent epimerase/dehydratase family JC777_15720 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain JC777_15720 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain JC777_15720 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain JC777_15725 PF00483 Nucleotidyl transferase JC777_15735 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JC777_15750 PF07670 Nucleoside recognition JC777_15760 PF08028 Acyl-CoA dehydrogenase, C-terminal domain JC777_15760 PF02770 Acyl-CoA dehydrogenase, middle domain JC777_15760 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JC777_15765 PF03932 CutC family JC777_15770 PF10502 Signal peptidase, peptidase S26 JC777_15775 PF09339 IclR helix-turn-helix domain JC777_15775 PF01614 Bacterial transcriptional regulator JC777_15780 PF02682 Carboxyltransferase domain, subdomain C and D JC777_15785 PF02626 Carboxyltransferase domain, subdomain A and B JC777_15790 PF03746 LamB/YcsF family JC777_15805 PF01470 Pyroglutamyl peptidase JC777_15810 PF02146 Sir2 family JC777_15815 PF01569 PAP2 superfamily JC777_15825 PF00324 Amino acid permease JC777_15835 PF01925 Sulfite exporter TauE/SafE JC777_15850 PF00149 Calcineurin-like phosphoesterase JC777_15860 PF00155 Aminotransferase class I and II JC777_15860 PF00392 Bacterial regulatory proteins, gntR family JC777_15865 PF00892 EamA-like transporter family JC777_15870 PF02423 Ornithine cyclodeaminase/mu-crystallin family JC777_15875 PF07690 Major Facilitator Superfamily JC777_15875 PF00083 Sugar (and other) transporter JC777_15880 PF00583 Acetyltransferase (GNAT) family JC777_15885 PF16363 GDP-mannose 4,6 dehydratase JC777_15895 PF00293 NUDIX domain JC777_15900 PF13170 Protein of unknown function (DUF4003) JC777_15920 PF13302 Acetyltransferase (GNAT) domain JC777_15935 PF03992 Antibiotic biosynthesis monooxygenase JC777_15945 PF09706 CRISPR-associated protein (Cas_CXXC_CXXC) JC777_15960 PF18395 Cas3 C-terminal domain JC777_15960 PF18019 HD domain JC777_15960 PF00270 DEAD/DEAH box helicase JC777_15970 PF01867 CRISPR associated protein Cas1 JC777_15975 PF09827 CRISPR associated protein Cas2 JC777_15980 PF02371 Transposase IS116/IS110/IS902 family JC777_15980 PF01548 Transposase JC777_15990 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JC777_15995 PF00291 Pyridoxal-phosphate dependent enzyme JC777_16010 PF01817 Chorismate mutase type II JC777_16010 PF00793 DAHP synthetase I family JC777_16015 PF00005 ABC transporter JC777_16015 PF12848 ABC transporter JC777_16020 PF00884 Sulfatase JC777_16025 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JC777_16030 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JC777_16035 PF03611 PTS system sugar-specific permease component JC777_16040 PF01522 Polysaccharide deacetylase JC777_16050 PF00583 Acetyltransferase (GNAT) family JC777_16065 PF02522 Aminoglycoside 3-N-acetyltransferase JC777_16075 PF00005 ABC transporter JC777_16080 PF09084 NMT1/THI5 like JC777_16085 PF00528 Binding-protein-dependent transport system inner membrane component JC777_16090 PF00296 Luciferase-like monooxygenase JC777_16100 PF01594 AI-2E family transporter JC777_16125 PF00753 Metallo-beta-lactamase superfamily JC777_16125 PF16123 Hydroxyacylglutathione hydrolase C-terminus JC777_16130 PF13538 UvrD-like helicase C-terminal domain JC777_16135 PF03630 Fumble JC777_16145 PF00155 Aminotransferase class I and II JC777_16165 PF13936 Helix-turn-helix domain JC777_16165 PF00665 Integrase core domain JC777_16190 PF04226 Transglycosylase associated protein JC777_16230 PF00144 Beta-lactamase JC777_16250 PF02645 Uncharacterised protein, DegV family COG1307 JC777_16325 PF13378 Enolase C-terminal domain-like JC777_16325 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain JC777_16330 PF00877 NlpC/P60 family JC777_16330 PF18348 Bacterial dipeptidyl-peptidase Sh3 domain JC777_16335 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JC777_16355 PF08876 Domain of unknown function (DUF1836) JC777_16370 PF08240 Alcohol dehydrogenase GroES-like domain JC777_16370 PF00107 Zinc-binding dehydrogenase JC777_16380 PF18416 N-acetylglucosamine binding protein domain 2 JC777_16380 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading JC777_16385 PF01368 DHH family JC777_16385 PF02833 DHHA2 domain JC777_16415 PF09382 RQC domain JC777_16415 PF16124 RecQ zinc-binding JC777_16415 PF00570 HRDC domain JC777_16415 PF00271 Helicase conserved C-terminal domain JC777_16415 PF00270 DEAD/DEAH box helicase JC777_16440 PF13673 Acetyltransferase (GNAT) domain JC777_16460 PF00574 Clp protease JC777_16465 PF04069 Substrate binding domain of ABC-type glycine betaine transport system JC777_16470 PF00005 ABC transporter JC777_16470 PF00571 CBS domain JC777_16475 PF00528 Binding-protein-dependent transport system inner membrane component JC777_16480 PF01022 Bacterial regulatory protein, arsR family JC777_16485 PF00106 short chain dehydrogenase JC777_16495 PF00266 Aminotransferase class-V JC777_16500 PF04199 Putative cyclase JC777_16505 PF03301 Tryptophan 2,3-dioxygenase JC777_16525 PF07486 Cell Wall Hydrolase JC777_16525 PF01471 Putative peptidoglycan binding domain JC777_16530 PF14620 YpeB sporulation JC777_16530 PF03413 Peptidase propeptide and YPEB domain JC777_16535 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) JC777_16550 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JC777_16550 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JC777_16555 PF04962 KduI/IolB family JC777_16560 PF00356 Bacterial regulatory proteins, lacI family JC777_16565 PF00294 pfkB family carbohydrate kinase JC777_16570 PF00171 Aldehyde dehydrogenase family JC777_16575 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JC777_16575 PF00205 Thiamine pyrophosphate enzyme, central domain JC777_16575 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JC777_16580 PF01261 Xylose isomerase-like TIM barrel JC777_16585 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JC777_16585 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JC777_16590 PF00474 Sodium:solute symporter family JC777_16595 PF03070 TENA/THI-4/PQQC family JC777_16615 PF18470 Cas9 alpha-helical lobe domain JC777_16615 PF13395 HNH endonuclease JC777_16615 PF18541 RuvC endonuclease subdomain 3 JC777_16620 PF01867 CRISPR associated protein Cas1 JC777_16625 PF09827 CRISPR associated protein Cas2 JC777_16670 PF00067 Cytochrome P450 JC777_16680 PF07561 Domain of Unknown Function (DUF1540) JC777_16695 PF00512 His Kinase A (phospho-acceptor) domain JC777_16695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC777_16695 PF13426 PAS domain JC777_16695 PF13188 PAS domain JC777_16695 PF00989 PAS fold JC777_16700 PF04303 PrpF protein JC777_16710 PF01177 Asp/Glu/Hydantoin racemase JC777_16745 PF01810 LysE type translocator JC777_16750 PF00392 Bacterial regulatory proteins, gntR family JC777_16750 PF00155 Aminotransferase class I and II JC777_16760 PF00535 Glycosyl transferase family 2 JC777_16765 PF00535 Glycosyl transferase family 2 JC777_16805 PF07690 Major Facilitator Superfamily JC777_16825 PF00293 NUDIX domain JC777_16850 PF01734 Patatin-like phospholipase JC777_16855 PF08000 Bacterial PH domain JC777_16860 PF12867 DinB superfamily JC777_16865 PF01541 GIY-YIG catalytic domain JC777_16870 PF01266 FAD dependent oxidoreductase JC777_16875 PF10676 Spore germination protein gerPA/gerPF JC777_16895 PF00344 SecY translocase JC777_16900 PF01965 DJ-1/PfpI family JC777_16915 PF07486 Cell Wall Hydrolase JC777_16915 PF01471 Putative peptidoglycan binding domain JC777_16920 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin JC777_16920 PF18277 AbrB C-terminal domain JC777_16940 PF00512 His Kinase A (phospho-acceptor) domain JC777_16940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC777_16940 PF00672 HAMP domain JC777_16945 PF00486 Transcriptional regulatory protein, C terminal JC777_16945 PF00072 Response regulator receiver domain JC777_16965 PF00005 ABC transporter JC777_16970 PF07739 TipAS antibiotic-recognition domain JC777_16970 PF13411 MerR HTH family regulatory protein JC777_16990 PF01966 HD domain JC777_16995 PF00072 Response regulator receiver domain JC777_16995 PF00486 Transcriptional regulatory protein, C terminal JC777_17000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC777_17000 PF00512 His Kinase A (phospho-acceptor) domain JC777_17000 PF16736 Single Cache-like JC777_17000 PF00989 PAS fold JC777_17005 PF07943 Penicillin-binding protein 5, C-terminal domain JC777_17005 PF00768 D-alanyl-D-alanine carboxypeptidase JC777_17015 PF00535 Glycosyl transferase family 2 JC777_17025 PF16177 Acetyl-coenzyme A synthetase N-terminus JC777_17025 PF13193 AMP-binding enzyme C-terminal domain JC777_17025 PF00501 AMP-binding enzyme JC777_17030 PF01039 Carboxyl transferase domain JC777_17035 PF00378 Enoyl-CoA hydratase/isomerase JC777_17040 PF00682 HMGL-like JC777_17045 PF00364 Biotin-requiring enzyme JC777_17050 PF02785 Biotin carboxylase C-terminal domain JC777_17050 PF00289 Biotin carboxylase, N-terminal domain JC777_17050 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JC777_17055 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JC777_17055 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JC777_17055 PF02770 Acyl-CoA dehydrogenase, middle domain JC777_17065 PF07687 Peptidase dimerisation domain JC777_17065 PF01546 Peptidase family M20/M25/M40 JC777_17070 PF04439 Streptomycin adenylyltransferase JC777_17090 PF14171 Toxin SpoIISA, type II toxin-antitoxin system JC777_17095 PF00300 Histidine phosphatase superfamily (branch 1) JC777_17105 PF00270 DEAD/DEAH box helicase JC777_17105 PF00271 Helicase conserved C-terminal domain JC777_17115 PF01869 BadF/BadG/BcrA/BcrD ATPase family JC777_17120 PF02378 Phosphotransferase system, EIIC JC777_17130 PF02638 Glycosyl hydrolase-like 10 JC777_17145 PF01596 O-methyltransferase JC777_17160 PF00664 ABC transporter transmembrane region JC777_17160 PF00005 ABC transporter JC777_17165 PF00664 ABC transporter transmembrane region JC777_17165 PF00005 ABC transporter JC777_17185 PF00313 'Cold-shock' DNA-binding domain JC777_17195 PF00248 Aldo/keto reductase family JC777_17200 PF01593 Flavin containing amine oxidoreductase JC777_17240 PF02824 TGS domain JC777_17240 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JC777_17240 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JC777_17240 PF03129 Anticodon binding domain JC777_17260 PF00216 Bacterial DNA-binding protein JC777_17280 PF03621 MbtH-like protein JC777_17285 PF13193 AMP-binding enzyme C-terminal domain JC777_17285 PF00501 AMP-binding enzyme JC777_17285 PF00668 Condensation domain JC777_17285 PF00550 Phosphopantetheine attachment site JC777_17285 PF00975 Thioesterase domain JC777_17290 PF00857 Isochorismatase family JC777_17290 PF00550 Phosphopantetheine attachment site JC777_17295 PF00501 AMP-binding enzyme JC777_17295 PF13193 AMP-binding enzyme C-terminal domain JC777_17300 PF00425 chorismate binding enzyme JC777_17305 PF00106 short chain dehydrogenase JC777_17330 PF14552 Tautomerase enzyme JC777_17340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JC777_17340 PF03466 LysR substrate binding domain JC777_17360 PF00854 POT family JC777_17365 PF13476 AAA domain JC777_17370 PF00149 Calcineurin-like phosphoesterase JC777_17370 PF12320 Type 5 capsule protein repressor C-terminal domain JC777_17375 PF10763 Protein of unknown function (DUF2584) JC777_17385 PF00378 Enoyl-CoA hydratase/isomerase JC777_17390 PF01810 LysE type translocator JC777_17400 PF00171 Aldehyde dehydrogenase family JC777_17405 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JC777_17405 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase JC777_17410 PF02770 Acyl-CoA dehydrogenase, middle domain JC777_17410 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JC777_17410 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JC777_17420 PF03972 MmgE/PrpD family JC777_17425 PF00285 Citrate synthase, C-terminal domain JC777_17435 PF00912 Transglycosylase JC777_17435 PF00905 Penicillin binding protein transpeptidase domain JC777_17450 PF10676 Spore germination protein gerPA/gerPF JC777_17455 PF01752 Collagenase JC777_17455 PF18496 Collagenase G catalytic helper subdomain JC777_17455 PF08453 Peptidase family M9 N-terminal JC777_17460 PF08892 YqcI/YcgG family JC777_17465 PF01810 LysE type translocator JC777_17475 PF12697 Alpha/beta hydrolase family JC777_17480 PF13529 Peptidase_C39 like family JC777_17485 PF01569 PAP2 superfamily JC777_17490 PF04239 Protein of unknown function (DUF421) JC777_17495 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase JC777_17500 PF00149 Calcineurin-like phosphoesterase JC777_17515 PF04072 Leucine carboxyl methyltransferase JC777_17525 PF10711 Hypothetical protein (DUF2513) JC777_17555 PF00085 Thioredoxin JC777_17560 PF16916 Dimerisation domain of Zinc Transporter JC777_17560 PF01545 Cation efflux family JC777_17565 PF01569 PAP2 superfamily JC777_17570 PF00805 Pentapeptide repeats (8 copies) JC777_17570 PF00069 Protein kinase domain JC777_17580 PF14162 YozD-like protein JC777_17605 PF07508 Recombinase JC777_17605 PF00239 Resolvase, N terminal domain JC777_17605 PF13408 Recombinase zinc beta ribbon domain JC777_17615 PF06855 YozE SAM-like fold JC777_17620 PF14122 YokU-like protein, putative antitoxin JC777_17625 PF12544 Lysine-2,3-aminomutase JC777_17630 PF00158 Sigma-54 interaction domain JC777_17630 PF13426 PAS domain JC777_17630 PF02954 Bacterial regulatory protein, Fis family JC777_17635 PF00583 Acetyltransferase (GNAT) family JC777_17640 PF07687 Peptidase dimerisation domain JC777_17640 PF01546 Peptidase family M20/M25/M40 JC777_17645 PF01144 Coenzyme A transferase JC777_17650 PF01144 Coenzyme A transferase JC777_17655 PF00202 Aminotransferase class-III JC777_17670 PF09385 Histidine kinase N terminal JC777_17675 PF07997 Protein of unknown function (DUF1694) JC777_17680 PF03471 Transporter associated domain JC777_17680 PF00571 CBS domain JC777_17680 PF01595 Cyclin M transmembrane N-terminal domain JC777_17690 PF03063 Prismane/CO dehydrogenase family JC777_17715 PF13520 Amino acid permease JC777_17730 PF03358 NADPH-dependent FMN reductase JC777_17745 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain JC777_17745 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JC777_17750 PF02447 GntP family permease JC777_17755 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JC777_17755 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JC777_17760 PF01380 SIS domain JC777_17760 PF01418 Helix-turn-helix domain, rpiR family JC777_17770 PF00011 Hsp20/alpha crystallin family JC777_17785 PF00881 Nitroreductase family JC777_17790 PF01063 Amino-transferase class IV JC777_17800 PF13537 Glutamine amidotransferase domain JC777_17800 PF00733 Asparagine synthase JC777_17805 PF00011 Hsp20/alpha crystallin family JC777_17810 PF02630 SCO1/SenC JC777_17820 PF02645 Uncharacterised protein, DegV family COG1307 JC777_17830 PF00902 Sec-independent protein translocase protein (TatC) JC777_17835 PF02416 mttA/Hcf106 family JC777_17840 PF03006 Haemolysin-III related JC777_17845 PF01553 Acyltransferase JC777_17850 PF02525 Flavodoxin-like fold JC777_17855 PF05223 NTF2-like N-terminal transpeptidase domain JC777_17855 PF00905 Penicillin binding protein transpeptidase domain JC777_17855 PF03717 Penicillin-binding Protein dimerisation domain JC777_17860 PF00186 Dihydrofolate reductase JC777_17865 PF00303 Thymidylate synthase JC777_17870 PF00144 Beta-lactamase JC777_17870 PF07930 D-aminopeptidase, domain B JC777_17880 PF14005 YpjP-like protein JC777_17885 PF05975 Bacterial ABC transporter protein EcsB JC777_17890 PF00005 ABC transporter JC777_17905 PF00583 Acetyltransferase (GNAT) family JC777_17910 PF01980 tRNA-methyltransferase O JC777_17920 PF00465 Iron-containing alcohol dehydrogenase JC777_17925 PF10997 Alternate to MurJ JC777_17935 PF05977 Transmembrane secretion effector JC777_17940 PF00899 ThiF family JC777_17950 PF00561 alpha/beta hydrolase fold JC777_17955 PF00209 Sodium:neurotransmitter symporter family JC777_17965 PF00750 tRNA synthetases class I (R) JC777_17965 PF03485 Arginyl tRNA synthetase N terminal domain JC777_17965 PF05746 DALR anticodon binding domain JC777_17970 PF04445 Putative SAM-dependent methyltransferase JC777_17975 PF06491 Disulphide isomerase JC777_17985 PF08712 Scaffold protein Nfu/NifU N terminal JC777_17985 PF13769 Virulence factor JC777_17990 PF00436 Single-strand binding protein family JC777_18000 PF12848 ABC transporter JC777_18000 PF16326 ABC transporter C-terminal domain JC777_18000 PF00005 ABC transporter JC777_18005 PF01966 HD domain JC777_18045 PF01451 Low molecular weight phosphotyrosine protein phosphatase JC777_18050 PF01758 Sodium Bile acid symporter family JC777_18055 PF01022 Bacterial regulatory protein, arsR family JC777_18070 PF03413 Peptidase propeptide and YPEB domain JC777_18070 PF07504 Fungalysin/Thermolysin Propeptide Motif JC777_18070 PF02868 Thermolysin metallopeptidase, alpha-helical domain JC777_18070 PF01447 Thermolysin metallopeptidase, catalytic domain JC777_18080 PF00255 Glutathione peroxidase JC777_18090 PF00270 DEAD/DEAH box helicase JC777_18090 PF00271 Helicase conserved C-terminal domain JC777_18100 PF01268 Formate--tetrahydrofolate ligase JC777_18105 PF01209 ubiE/COQ5 methyltransferase family JC777_18130 PF09579 Sporulation protein YtfJ (Spore_YtfJ) JC777_18170 PF10140 WXG100 protein secretion system (Wss), protein YukC JC777_18190 PF06013 Proteins of 100 residues with WXG JC777_18215 PF00155 Aminotransferase class I and II JC777_18215 PF00392 Bacterial regulatory proteins, gntR family JC777_18220 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase JC777_18225 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase JC777_18230 PF00842 Alanine racemase, C-terminal domain JC777_18230 PF01168 Alanine racemase, N-terminal domain JC777_18245 PF01145 SPFH domain / Band 7 family JC777_18255 PF00528 Binding-protein-dependent transport system inner membrane component JC777_18260 PF00005 ABC transporter JC777_18280 PF02557 D-alanyl-D-alanine carboxypeptidase JC777_18290 PF07454 Stage II sporulation protein P (SpoIIP) JC777_18305 PF05525 Branched-chain amino acid transport protein JC777_18320 PF01595 Cyclin M transmembrane N-terminal domain JC777_18320 PF03471 Transporter associated domain JC777_18320 PF00571 CBS domain JC777_18325 PF04306 Protein of unknown function (DUF456) JC777_18345 PF13091 PLD-like domain JC777_18355 PF03061 Thioesterase superfamily JC777_18360 PF09323 Domain of unknown function (DUF1980) JC777_18365 PF03773 Predicted permease JC777_18375 PF01943 Polysaccharide biosynthesis protein JC777_18375 PF14667 Polysaccharide biosynthesis C-terminal domain JC777_18380 PF09335 SNARE associated Golgi protein JC777_18385 PF00293 NUDIX domain JC777_18390 PF08757 CotH kinase protein JC777_18400 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JC777_18405 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JC777_18420 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JC777_18435 PF07690 Major Facilitator Superfamily JC777_18440 PF01638 HxlR-like helix-turn-helix JC777_18460 PF07685 CobB/CobQ-like glutamine amidotransferase domain JC777_18460 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain JC777_18465 PF13439 Glycosyltransferase Family 4 JC777_18465 PF00534 Glycosyl transferases group 1 JC777_18480 PF07690 Major Facilitator Superfamily JC777_18505 PF01297 Zinc-uptake complex component A periplasmic JC777_18515 PF02492 CobW/HypB/UreG, nucleotide-binding domain JC777_18515 PF07683 Cobalamin synthesis protein cobW C-terminal domain JC777_18535 PF00210 Ferritin-like domain JC777_18555 PF00672 HAMP domain JC777_18555 PF02743 Cache domain JC777_18555 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JC777_18570 PF00082 Subtilase family JC777_18575 PF03176 MMPL family JC777_18575 PF12823 Domain of unknown function (DUF3817) JC777_18580 PF02687 FtsX-like permease family JC777_18585 PF02540 NAD synthase JC777_18605 PF01734 Patatin-like phospholipase JC777_18615 PF00269 Small, acid-soluble spore proteins, alpha/beta type JC777_18620 PF00583 Acetyltransferase (GNAT) family JC777_18625 PF02308 MgtC family JC777_18635 PF01522 Polysaccharide deacetylase JC777_18640 PF03816 Cell envelope-related transcriptional attenuator domain JC777_18645 PF08544 GHMP kinases C terminal JC777_18645 PF00288 GHMP kinases N terminal domain JC777_18650 PF00291 Pyridoxal-phosphate dependent enzyme JC777_18655 PF01842 ACT domain JC777_18655 PF00742 Homoserine dehydrogenase JC777_18655 PF03447 Homoserine dehydrogenase, NAD binding domain JC777_18665 PF00106 short chain dehydrogenase JC777_18670 PF01476 LysM domain JC777_18670 PF00877 NlpC/P60 family JC777_18680 PF01648 4'-phosphopantetheinyl transferase superfamily JC777_18685 PF07943 Penicillin-binding protein 5, C-terminal domain JC777_18685 PF00768 D-alanyl-D-alanine carboxypeptidase JC777_18710 PF02492 CobW/HypB/UreG, nucleotide-binding domain JC777_18710 PF07683 Cobalamin synthesis protein cobW C-terminal domain JC777_18715 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain JC777_18715 PF00056 lactate/malate dehydrogenase, NAD binding domain JC777_18720 PF01594 AI-2E family transporter JC777_18725 PF00202 Aminotransferase class-III JC777_18730 PF00171 Aldehyde dehydrogenase family JC777_18740 PF02525 Flavodoxin-like fold JC777_18745 PF00465 Iron-containing alcohol dehydrogenase JC777_18750 PF00171 Aldehyde dehydrogenase family JC777_18765 PF01751 Toprim domain JC777_18765 PF13342 C-terminal repeat of topoisomerase JC777_18765 PF01396 Topoisomerase DNA binding C4 zinc finger JC777_18765 PF01131 DNA topoisomerase JC777_18775 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JC777_18780 PF01791 DeoC/LacD family aldolase JC777_18785 PF04198 Putative sugar-binding domain JC777_18805 PF00581 Rhodanese-like domain JC777_18805 PF12368 Rhodanase C-terminal JC777_18805 PF17773 UPF0176 acylphosphatase like domain JC777_18810 PF01566 Natural resistance-associated macrophage protein JC777_18820 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JC777_18825 PF01979 Amidohydrolase family JC777_18845 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase JC777_18850 PF07690 Major Facilitator Superfamily JC777_18855 PF00899 ThiF family JC777_18860 PF00291 Pyridoxal-phosphate dependent enzyme JC777_18860 PF00585 C-terminal regulatory domain of Threonine dehydratase JC777_18865 PF00920 Dehydratase family JC777_18880 PF01063 Amino-transferase class IV JC777_18885 PF01625 Peptide methionine sulfoxide reductase JC777_18900 PF00209 Sodium:neurotransmitter symporter family JC777_18905 PF14667 Polysaccharide biosynthesis C-terminal domain JC777_18905 PF01943 Polysaccharide biosynthesis protein JC777_18910 PF00291 Pyridoxal-phosphate dependent enzyme JC777_18915 PF07690 Major Facilitator Superfamily JC777_18920 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JC777_18925 PF12848 ABC transporter JC777_18925 PF00005 ABC transporter JC777_18930 PF13167 GTP-binding GTPase N-terminal JC777_18930 PF16360 GTP-binding GTPase Middle Region JC777_18930 PF01926 50S ribosome-binding GTPase JC777_18940 PF04397 LytTr DNA-binding domain JC777_18940 PF00072 Response regulator receiver domain JC777_18945 PF00989 PAS fold JC777_18945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC777_18945 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain JC777_18945 PF17203 Single cache domain 3 JC777_18960 PF04647 Accessory gene regulator B JC777_19000 PF00005 ABC transporter JC777_19065 PF00696 Amino acid kinase family JC777_19065 PF13840 ACT domain JC777_19070 PF01040 UbiA prenyltransferase family JC777_19075 PF00440 Bacterial regulatory proteins, tetR family JC777_19080 PF03590 Aspartate-ammonia ligase JC777_19090 PF00176 SNF2 family N-terminal domain JC777_19090 PF00271 Helicase conserved C-terminal domain JC777_19090 PF12419 SNF2 Helicase protein JC777_19095 PF01810 LysE type translocator JC777_19100 PF04286 Protein of unknown function (DUF445) JC777_19105 PF03575 Peptidase family S51 JC777_19110 PF01554 MatE JC777_19130 PF10415 Fumarase C C-terminus JC777_19130 PF00206 Lyase JC777_19135 PF03553 Na+/H+ antiporter family JC777_19145 PF00892 EamA-like transporter family JC777_19150 PF07729 FCD domain JC777_19150 PF00392 Bacterial regulatory proteins, gntR family JC777_19170 PF13537 Glutamine amidotransferase domain JC777_19170 PF00733 Asparagine synthase JC777_19205 PF00005 ABC transporter JC777_19210 PF17922 Tetracyclin repressor-like, C-terminal domain JC777_19210 PF00440 Bacterial regulatory proteins, tetR family JC777_19240 PF07690 Major Facilitator Superfamily JC777_19245 PF08141 Small acid-soluble spore protein H family JC777_19250 PF17329 Family of unknown function (DUF5367) JC777_19255 PF00440 Bacterial regulatory proteins, tetR family JC777_19255 PF17932 Tetracyclin repressor-like, C-terminal domain JC777_19285 PF02687 FtsX-like permease family JC777_19285 PF12704 MacB-like periplasmic core domain JC777_19285 PF00005 ABC transporter JC777_19290 PF00460 Flagella basal body rod protein JC777_19290 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JC777_19295 PF00448 SRP54-type protein, GTPase domain JC777_19300 PF00771 FHIPEP family JC777_19305 PF01312 FlhB HrpN YscU SpaS Family JC777_19315 PF01313 Bacterial export proteins, family 3 JC777_19320 PF00813 FliP family JC777_19330 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term JC777_19335 PF02154 Flagellar motor switch protein FliM JC777_19335 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term JC777_19340 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term JC777_19345 PF01464 Transglycosylase SLT domain JC777_19350 PF00669 Bacterial flagellin N-terminal helical region JC777_19350 PF00700 Bacterial flagellin C-terminal helical region JC777_19365 PF13181 Tetratricopeptide repeat JC777_19365 PF00535 Glycosyl transferase family 2 JC777_19370 PF00669 Bacterial flagellin N-terminal helical region JC777_19370 PF00700 Bacterial flagellin C-terminal helical region JC777_19375 PF12181 DNA binding domain of the motility gene repressor (MogR) JC777_19380 PF00072 Response regulator receiver domain JC777_19380 PF01584 CheW-like domain JC777_19395 PF07559 Flagellar basal body protein FlaE JC777_19395 PF00460 Flagella basal body rod protein JC777_19395 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JC777_19415 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JC777_19415 PF02874 ATP synthase alpha/beta family, beta-barrel domain JC777_19415 PF18269 T3SS EscN ATPase C-terminal domain JC777_19425 PF14842 FliG N-terminal domain JC777_19425 PF14841 FliG middle domain JC777_19425 PF01706 FliG C-terminal domain JC777_19430 PF01514 Secretory protein of YscJ/FliF family JC777_19430 PF08345 Flagellar M-ring protein C-terminal JC777_19435 PF02049 Flagellar hook-basal body complex protein FliE JC777_19440 PF00460 Flagella basal body rod protein JC777_19440 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JC777_19445 PF00460 Flagella basal body rod protein JC777_19465 PF00669 Bacterial flagellin N-terminal helical region JC777_19465 PF00700 Bacterial flagellin C-terminal helical region JC777_19470 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JC777_19470 PF00460 Flagella basal body rod protein JC777_19480 PF03885 Protein of unknown function (DUF327) JC777_19490 PF01739 CheR methyltransferase, SAM binding domain JC777_19490 PF03705 CheR methyltransferase, all-alpha domain JC777_19505 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term JC777_19505 PF04509 CheC-like family JC777_19510 PF07194 P2 response regulator binding domain JC777_19510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC777_19510 PF02895 Signal transducing histidine kinase, homodimeric domain JC777_19510 PF01584 CheW-like domain JC777_19510 PF01627 Hpt domain JC777_19515 PF00072 Response regulator receiver domain JC777_19520 PF13677 Membrane MotB of proton-channel complex MotA/MotB JC777_19520 PF00691 OmpA family JC777_19525 PF01618 MotA/TolQ/ExbB proton channel family JC777_19545 PF09680 Family of unknown function JC777_19550 PF00881 Nitroreductase family JC777_19555 PF02698 DUF218 domain JC777_19560 PF04239 Protein of unknown function (DUF421) JC777_19565 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain JC777_19565 PF00753 Metallo-beta-lactamase superfamily JC777_19565 PF17770 Ribonuclease J C-terminal domain JC777_19570 PF00999 Sodium/hydrogen exchanger family JC777_19575 PF00202 Aminotransferase class-III JC777_19580 PF00474 Sodium:solute symporter family JC777_19585 PF04341 Protein of unknown function, DUF485 JC777_19595 PF00313 'Cold-shock' DNA-binding domain JC777_19625 PF01263 Aldose 1-epimerase JC777_19630 PF13456 Reverse transcriptase-like JC777_19650 PF01638 HxlR-like helix-turn-helix JC777_19655 PF01367 5'-3' exonuclease, C-terminal SAM fold JC777_19655 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain JC777_19660 PF00690 Cation transporter/ATPase, N-terminus JC777_19660 PF00689 Cation transporting ATPase, C-terminus JC777_19665 PF03994 Domain of Unknown Function (DUF350) JC777_19695 PF00581 Rhodanese-like domain JC777_19700 PF10752 Protein of unknown function (DUF2533) JC777_19705 PF00583 Acetyltransferase (GNAT) family JC777_19715 PF00350 Dynamin family JC777_19720 PF04235 Protein of unknown function (DUF418) JC777_19725 PF00860 Permease family JC777_19730 PF00156 Phosphoribosyl transferase domain JC777_19735 PF02074 Carboxypeptidase Taq (M32) metallopeptidase JC777_19740 PF13307 Helicase C-terminal domain JC777_19750 PF02926 THUMP domain JC777_19750 PF01170 Putative RNA methylase family UPF0020 JC777_19760 PF05103 DivIVA protein JC777_19765 PF06908 YspA SLOG family JC777_19770 PF11122 Inner spore coat protein D JC777_19795 PF10720 Protein of unknown function (DUF2515) JC777_19800 PF03838 Recombination protein U JC777_19805 PF00905 Penicillin binding protein transpeptidase domain JC777_19805 PF00912 Transglycosylase JC777_19815 PF00730 HhH-GPD superfamily base excision DNA repair protein JC777_19815 PF10576 Iron-sulfur binding domain of endonuclease III JC777_19815 PF00633 Helix-hairpin-helix motif JC777_19820 PF07261 Replication initiation and membrane attachment JC777_19825 PF00155 Aminotransferase class I and II JC777_19835 PF14084 Protein of unknown function (DUF4264) JC777_19840 PF13307 Helicase C-terminal domain JC777_19840 PF04851 Type III restriction enzyme, res subunit JC777_19840 PF00929 Exonuclease JC777_19845 PF02261 Aspartate decarboxylase JC777_19850 PF02569 Pantoate-beta-alanine ligase JC777_19855 PF02548 Ketopantoate hydroxymethyltransferase JC777_19860 PF08279 HTH domain JC777_19860 PF03099 Biotin/lipoate A/B protein ligase family JC777_19860 PF02237 Biotin protein ligase C terminal domain JC777_19865 PF13735 tRNA nucleotidyltransferase domain 2 putative JC777_19865 PF01743 Poly A polymerase head domain JC777_19865 PF12627 Probable RNA and SrmB- binding site of polymerase A JC777_19870 PF00534 Glycosyl transferases group 1 JC777_19870 PF13439 Glycosyltransferase Family 4 JC777_19875 PF02585 GlcNAc-PI de-N-acetylase JC777_19880 PF02142 MGS-like domain JC777_19885 PF05173 Dihydrodipicolinate reductase, C-terminus JC777_19885 PF01113 Dihydrodipicolinate reductase, N-terminus JC777_19890 PF03819 MazG nucleotide pyrophosphohydrolase domain JC777_19895 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JC777_19895 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JC777_19905 PF04298 Putative neutral zinc metallopeptidase JC777_19920 PF07187 Protein of unknown function (DUF1405) JC777_19925 PF00032 Cytochrome b(C-terminal)/b6/petD JC777_19925 PF13442 Cytochrome C oxidase, cbb3-type, subunit III JC777_19930 PF00033 Cytochrome b/b6/petB JC777_19935 PF00355 Rieske [2Fe-2S] domain JC777_19940 PF10673 Protein of unknown function (DUF2487) JC777_19945 PF08864 UPF0302 domain JC777_19945 PF08858 IDEAL domain JC777_19955 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JC777_19960 PF00155 Aminotransferase class I and II JC777_19965 PF01761 3-dehydroquinate synthase JC777_19970 PF01264 Chorismate synthase JC777_19975 PF00334 Nucleoside diphosphate kinase JC777_19980 PF00348 Polyprenyl synthetase JC777_19985 PF01209 ubiE/COQ5 methyltransferase family JC777_19990 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 JC777_19995 PF01227 GTP cyclohydrolase I JC777_20000 PF00216 Bacterial DNA-binding protein JC777_20005 PF09547 Stage IV sporulation protein A (spore_IV_A) JC777_20015 PF10966 Protein of unknown function (DUF2768) JC777_20025 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus JC777_20025 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus JC777_20030 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal JC777_20030 PF01926 50S ribosome-binding GTPase JC777_20040 PF14045 YIEGIA protein JC777_20050 PF14140 YpzI-like protein JC777_20055 PF01070 FMN-dependent dehydrogenase JC777_20060 PF00575 S1 RNA binding domain JC777_20065 PF02224 Cytidylate kinase JC777_20075 PF17763 Glutaminase/Asparaginase C-terminal domain JC777_20075 PF00710 Asparaginase, N-terminal JC777_20095 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase JC777_20095 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain JC777_20100 PF05389 Negative regulator of genetic competence (MecA) JC777_20105 PF02607 B12 binding domain JC777_20105 PF13411 MerR HTH family regulatory protein JC777_20105 PF02310 B12 binding domain JC777_20110 PF00149 Calcineurin-like phosphoesterase JC777_20120 PF02517 CPBP intramembrane metalloprotease JC777_20125 PF00271 Helicase conserved C-terminal domain JC777_20125 PF00270 DEAD/DEAH box helicase JC777_20140 PF12822 ECF transporter, substrate-specific component JC777_20150 PF01476 LysM domain JC777_20150 PF01551 Peptidase family M23 JC777_20155 PF01923 Cobalamin adenosyltransferase JC777_20160 PF00989 PAS fold JC777_20160 PF18698 Histidine kinase sensor domain JC777_20160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC777_20160 PF00672 HAMP domain JC777_20160 PF00512 His Kinase A (phospho-acceptor) domain JC777_20165 PF00072 Response regulator receiver domain JC777_20165 PF00486 Transcriptional regulatory protein, C terminal JC777_20170 PF01578 Cytochrome C assembly protein JC777_20175 PF05140 ResB-like family JC777_20180 PF00578 AhpC/TSA family JC777_20185 PF00849 RNA pseudouridylate synthase JC777_20185 PF01479 S4 domain JC777_20190 PF07670 Nucleoside recognition JC777_20195 PF07670 Nucleoside recognition JC777_20200 PF00768 D-alanyl-D-alanine carboxypeptidase JC777_20200 PF07943 Penicillin-binding protein 5, C-terminal domain JC777_20205 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain JC777_20205 PF02777 Iron/manganese superoxide dismutases, C-terminal domain JC777_20220 PF03706 Lysylphosphatidylglycerol synthase TM region JC777_20220 PF09924 Uncharacterised conserved protein (DUF2156) JC777_20230 PF01048 Phosphorylase superfamily JC777_20235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC777_20235 PF16736 Single Cache-like JC777_20235 PF00989 PAS fold JC777_20235 PF00512 His Kinase A (phospho-acceptor) domain JC777_20240 PF00589 Phage integrase family JC777_20250 PF01904 Protein of unknown function DUF72 JC777_20255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC777_20255 PF00512 His Kinase A (phospho-acceptor) domain JC777_20255 PF00989 PAS fold JC777_20265 PF00912 Transglycosylase JC777_20265 PF00905 Penicillin binding protein transpeptidase domain JC777_20270 PF01865 Protein of unknown function DUF47 JC777_20275 PF01384 Phosphate transporter family JC777_20280 PF01925 Sulfite exporter TauE/SafE JC777_20295 PF00970 Oxidoreductase FAD-binding domain JC777_20295 PF00042 Globin JC777_20295 PF00175 Oxidoreductase NAD-binding domain JC777_20300 PF00665 Integrase core domain JC777_20300 PF13333 Integrase core domain JC777_20310 PF01238 Phosphomannose isomerase type I JC777_20315 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JC777_20315 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JC777_20315 PF02378 Phosphotransferase system, EIIC JC777_20320 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JC777_20320 PF00874 PRD domain JC777_20320 PF05043 Mga helix-turn-helix domain JC777_20320 PF08279 HTH domain JC777_20355 PF02872 5'-nucleotidase, C-terminal domain JC777_20355 PF00746 LPXTG cell wall anchor motif JC777_20355 PF00149 Calcineurin-like phosphoesterase JC777_20355 PF00565 Staphylococcal nuclease homologue JC777_20360 PF05525 Branched-chain amino acid transport protein JC777_20365 PF00072 Response regulator receiver domain JC777_20365 PF00196 Bacterial regulatory proteins, luxR family JC777_20370 PF07730 Histidine kinase JC777_20370 PF00672 HAMP domain JC777_20370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC777_20375 PF09922 Cell wall-active antibiotics response 4TMS YvqF JC777_20390 PF03553 Na+/H+ antiporter family JC777_20395 PF04167 Protein of unknown function (DUF402) JC777_20400 PF00375 Sodium:dicarboxylate symporter family JC777_20410 PF00209 Sodium:neurotransmitter symporter family JC777_20415 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JC777_20415 PF14824 Sirohaem biosynthesis protein central JC777_20415 PF10414 Sirohaem synthase dimerisation region JC777_20420 PF01903 CbiX JC777_20425 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JC777_20435 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain JC777_20435 PF01077 Nitrite and sulphite reductase 4Fe-4S domain JC777_20445 PF14306 PUA-like domain JC777_20445 PF01747 ATP-sulfurylase JC777_20450 PF01507 Phosphoadenosine phosphosulfate reductase family JC777_20460 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain JC777_20460 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain JC777_20470 PF00884 Sulfatase JC777_20475 PF01066 CDP-alcohol phosphatidyltransferase JC777_20480 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JC777_20480 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JC777_20490 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase JC777_20495 PF01502 Phosphoribosyl-AMP cyclohydrolase JC777_20500 PF00977 Histidine biosynthesis protein JC777_20505 PF00977 Histidine biosynthesis protein JC777_20510 PF00117 Glutamine amidotransferase class-I JC777_20515 PF00475 Imidazoleglycerol-phosphate dehydratase JC777_20520 PF00815 Histidinol dehydrogenase JC777_20525 PF01634 ATP phosphoribosyltransferase JC777_20530 PF13393 Histidyl-tRNA synthetase JC777_20535 PF00694 Aconitase C-terminal domain JC777_20540 PF00330 Aconitase family (aconitate hydratase) JC777_20545 PF00180 Isocitrate/isopropylmalate dehydrogenase JC777_20550 PF00682 HMGL-like JC777_20550 PF08502 LeuA allosteric (dimerisation) domain JC777_20555 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain JC777_20555 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain JC777_20560 PF01842 ACT domain JC777_20560 PF10369 Small subunit of acetolactate synthase JC777_20565 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JC777_20565 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JC777_20565 PF00205 Thiamine pyrophosphate enzyme, central domain JC777_20575 PF03698 Uncharacterised protein family (UPF0180) JC777_20585 PF09579 Sporulation protein YtfJ (Spore_YtfJ) JC777_20595 PF02386 Cation transport protein JC777_20600 PF00375 Sodium:dicarboxylate symporter family JC777_20610 PF01047 MarR family JC777_20620 PF02673 Bacitracin resistance protein BacA JC777_20625 PF01554 MatE JC777_20635 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) JC777_20640 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus JC777_20640 PF00361 Proton-conducting membrane transporter JC777_20645 PF10057 Uncharacterized conserved protein (DUF2294) JC777_20670 PF00884 Sulfatase JC777_20695 PF00258 Flavodoxin JC777_20700 PF01546 Peptidase family M20/M25/M40 JC777_20700 PF07687 Peptidase dimerisation domain JC777_20710 PF00501 AMP-binding enzyme JC777_20710 PF13193 AMP-binding enzyme C-terminal domain JC777_20715 PF03062 MBOAT, membrane-bound O-acyltransferase family JC777_20720 PF00550 Phosphopantetheine attachment site JC777_20725 PF04914 DltD protein JC777_20730 PF03060 Nitronate monooxygenase JC777_20735 PF17676 LD-carboxypeptidase C-terminal domain JC777_20735 PF02016 LD-carboxypeptidase N-terminal domain JC777_20755 PF01037 Lrp/AsnC ligand binding domain JC777_20775 PF00005 ABC transporter JC777_20785 PF00005 ABC transporter JC777_20790 PF00392 Bacterial regulatory proteins, gntR family JC777_20795 PF00268 Ribonucleotide reductase, small chain JC777_20815 PF07972 NrdI Flavodoxin like JC777_20830 PF00583 Acetyltransferase (GNAT) family JC777_20840 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) JC777_20845 PF14489 QueF-like protein JC777_20850 PF04055 Radical SAM superfamily JC777_20855 PF01242 6-pyruvoyl tetrahydropterin synthase JC777_20860 PF06508 Queuosine biosynthesis protein QueC JC777_20865 PF12867 DinB superfamily JC777_20875 PF01047 MarR family JC777_20880 PF02743 Cache domain JC777_20880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC777_20880 PF00512 His Kinase A (phospho-acceptor) domain JC777_20885 PF09388 Spo0E like sporulation regulatory protein JC777_20890 PF04748 Divergent polysaccharide deacetylase JC777_20900 PF00596 Class II Aldolase and Adducin N-terminal domain JC777_20905 PF00455 DeoR C terminal sensor domain JC777_20905 PF08220 DeoR-like helix-turn-helix domain JC777_20910 PF00266 Aminotransferase class-V JC777_20915 PF13419 Haloacid dehalogenase-like hydrolase JC777_20920 PF00528 Binding-protein-dependent transport system inner membrane component JC777_20925 PF00005 ABC transporter JC777_20925 PF08402 TOBE domain JC777_20945 PF02386 Cation transport protein JC777_20950 PF00561 alpha/beta hydrolase fold JC777_20975 PF01575 MaoC like domain JC777_20980 PF00269 Small, acid-soluble spore proteins, alpha/beta type JC777_20985 PF02386 Cation transport protein JC777_20990 PF03741 Integral membrane protein TerC family JC777_20995 PF01226 Formate/nitrite transporter JC777_21000 PF00144 Beta-lactamase JC777_21000 PF11954 Domain of unknown function (DUF3471) JC777_21005 PF00561 alpha/beta hydrolase fold JC777_21015 PF03009 Glycerophosphoryl diester phosphodiesterase family JC777_21020 PF01478 Type IV leader peptidase family JC777_21020 PF06750 Bacterial Peptidase A24 N-terminal domain JC777_21025 PF02589 LUD domain JC777_21030 PF13183 4Fe-4S dicluster domain JC777_21030 PF11870 Domain of unknown function (DUF3390) JC777_21030 PF02589 LUD domain JC777_21035 PF02754 Cysteine-rich domain JC777_21040 PF07729 FCD domain JC777_21040 PF00392 Bacterial regulatory proteins, gntR family JC777_21045 PF00989 PAS fold JC777_21045 PF00512 His Kinase A (phospho-acceptor) domain JC777_21045 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC777_21045 PF16736 Single Cache-like JC777_21050 PF00486 Transcriptional regulatory protein, C terminal JC777_21050 PF00072 Response regulator receiver domain JC777_21060 PF13556 PucR C-terminal helix-turn-helix domain JC777_21060 PF17853 GGDEF-like domain JC777_21060 PF05651 Putative sugar diacid recognition JC777_21065 PF01565 FAD binding domain JC777_21065 PF02913 FAD linked oxidases, C-terminal domain JC777_21070 PF13183 4Fe-4S dicluster domain JC777_21070 PF02754 Cysteine-rich domain JC777_21075 PF00188 Cysteine-rich secretory protein family JC777_21085 PF00849 RNA pseudouridylate synthase JC777_21085 PF01479 S4 domain JC777_21095 PF03176 MMPL family JC777_21100 PF01569 PAP2 superfamily JC777_21105 PF13416 Bacterial extracellular solute-binding protein JC777_21110 PF00528 Binding-protein-dependent transport system inner membrane component JC777_21115 PF00528 Binding-protein-dependent transport system inner membrane component JC777_21120 PF08402 TOBE domain JC777_21120 PF00005 ABC transporter JC777_21125 PF00171 Aldehyde dehydrogenase family JC777_21130 PF05547 Immune inhibitor A peptidase M6 JC777_21140 PF08671 Anti-repressor SinI JC777_21140 PF01381 Helix-turn-helix JC777_21150 PF12389 Camelysin metallo-endopeptidase JC777_21170 PF07943 Penicillin-binding protein 5, C-terminal domain JC777_21170 PF00768 D-alanyl-D-alanine carboxypeptidase JC777_21185 PF00589 Phage integrase family JC777_21185 PF14659 Phage integrase, N-terminal SAM-like domain JC777_21215 PF04740 LXG domain of WXG superfamily JC777_21215 PF14436 Bacterial EndoU nuclease JC777_21290 PF18593 CdiI immunity protein JC777_21295 PF18593 CdiI immunity protein JC777_21310 PF02962 5-carboxymethyl-2-hydroxymuconate isomerase JC777_21320 PF01557 Fumarylacetoacetate (FAA) hydrolase family JC777_21325 PF01557 Fumarylacetoacetate (FAA) hydrolase family JC777_21330 PF00474 Sodium:solute symporter family JC777_21335 PF04341 Protein of unknown function, DUF485 JC777_21340 PF01687 Riboflavin kinase JC777_21340 PF06574 FAD synthetase JC777_21345 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JC777_21350 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal JC777_21350 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal JC777_21355 PF00171 Aldehyde dehydrogenase family JC777_21360 PF00701 Dihydrodipicolinate synthetase family JC777_21365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JC777_21365 PF03466 LysR substrate binding domain JC777_21375 PF00676 Dehydrogenase E1 component JC777_21375 PF16870 2-oxoglutarate dehydrogenase C-terminal JC777_21375 PF02779 Transketolase, pyrimidine binding domain JC777_21380 PF02817 e3 binding domain JC777_21380 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JC777_21380 PF00364 Biotin-requiring enzyme JC777_21405 PF07992 Pyridine nucleotide-disulphide oxidoreductase JC777_21405 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JC777_21420 PF10042 Uncharacterized conserved protein (DUF2278) JC777_21425 PF02652 L-lactate permease JC777_21435 PF00474 Sodium:solute symporter family JC777_21440 PF02368 Bacterial Ig-like domain (group 2) JC777_21455 PF00756 Putative esterase JC777_21470 PF13361 UvrD-like helicase C-terminal domain JC777_21470 PF00580 UvrD/REP helicase N-terminal domain JC777_21485 PF04321 RmlD substrate binding domain JC777_21490 PF16363 GDP-mannose 4,6 dehydratase JC777_21495 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase JC777_21500 PF00483 Nucleotidyl transferase JC777_21520 PF13181 Tetratricopeptide repeat JC777_21520 PF00535 Glycosyl transferase family 2 JC777_21530 PF05711 Macrocin-O-methyltransferase (TylF) JC777_21535 PF08241 Methyltransferase domain JC777_21540 PF00535 Glycosyl transferase family 2 JC777_21550 PF07098 Protein of unknown function (DUF1360) JC777_21555 PF10612 Spore coat protein Z JC777_21585 PF01098 Cell cycle protein JC777_21590 PF00149 Calcineurin-like phosphoesterase JC777_21600 PF00849 RNA pseudouridylate synthase JC777_21605 PF01513 ATP-NAD kinase JC777_21610 PF04607 Region found in RelA / SpoT proteins JC777_21620 PF01928 CYTH domain JC777_21625 PF01152 Bacterial-like globin JC777_21635 PF08439 Oligopeptidase F JC777_21635 PF01432 Peptidase family M3 JC777_21645 PF13091 PLD-like domain JC777_21645 PF13396 Phospholipase_D-nuclease N-terminal JC777_21650 PF05389 Negative regulator of genetic competence (MecA) JC777_21655 PF03741 Integral membrane protein TerC family JC777_21660 PF03960 ArsC family JC777_21670 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JC777_21675 PF01554 MatE JC777_21680 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JC777_21680 PF00005 ABC transporter JC777_21685 PF00005 ABC transporter JC777_21685 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JC777_21690 PF12911 N-terminal TM domain of oligopeptide transport permease C JC777_21690 PF00528 Binding-protein-dependent transport system inner membrane component JC777_21695 PF00528 Binding-protein-dependent transport system inner membrane component JC777_21700 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JC777_21710 PF00579 tRNA synthetases class I (W and Y) JC777_21715 PF12227 Protein of unknown function (DUF3603) JC777_21720 PF10026 Predicted Zn-dependent protease (DUF2268) JC777_21725 PF00109 Beta-ketoacyl synthase, N-terminal domain JC777_21725 PF02801 Beta-ketoacyl synthase, C-terminal domain JC777_21730 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal JC777_21730 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III JC777_21735 PF10815 ComZ JC777_21755 PF10431 C-terminal, D2-small domain, of ClpB protein JC777_21755 PF02861 Clp amino terminal domain, pathogenicity island component JC777_21755 PF17871 AAA lid domain JC777_21755 PF07724 AAA domain (Cdc48 subfamily) JC777_21755 PF00004 ATPase family associated with various cellular activities (AAA) JC777_21760 PF14168 YjzC-like protein JC777_21780 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JC777_21780 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JC777_21795 PF13509 S1 domain JC777_21795 PF17783 CvfB-like winged helix domain JC777_21800 PF04461 Protein of unknown function (DUF520) JC777_21805 PF03423 Carbohydrate binding domain (family 25) JC777_21805 PF00128 Alpha amylase, catalytic domain JC777_21805 PF01373 Glycosyl hydrolase family 14 JC777_21810 PF00199 Catalase JC777_21810 PF06628 Catalase-related immune-responsive JC777_21815 PF00762 Ferrochelatase JC777_21820 PF13537 Glutamine amidotransferase domain JC777_21820 PF00733 Asparagine synthase JC777_21830 PF07457 Protein of unknown function (DUF1516) JC777_21835 PF00202 Aminotransferase class-III JC777_21840 PF01557 Fumarylacetoacetate (FAA) hydrolase family JC777_21845 PF09388 Spo0E like sporulation regulatory protein JC777_21850 PF10676 Spore germination protein gerPA/gerPF JC777_21855 PF10803 Spore germination GerPB JC777_21860 PF10737 Spore germination protein GerPC JC777_21870 PF10970 Spore germination protein GerPE JC777_21875 PF10676 Spore germination protein gerPA/gerPF JC777_21880 PF12705 PD-(D/E)XK nuclease superfamily JC777_21880 PF00580 UvrD/REP helicase N-terminal domain JC777_21880 PF13361 UvrD-like helicase C-terminal domain JC777_21885 PF13361 UvrD-like helicase C-terminal domain JC777_21885 PF12705 PD-(D/E)XK nuclease superfamily JC777_21890 PF10502 Signal peptidase, peptidase S26 JC777_21895 PF09335 SNARE associated Golgi protein JC777_21900 PF06338 ComK protein JC777_21905 PF00313 'Cold-shock' DNA-binding domain JC777_21910 PF00463 Isocitrate lyase family JC777_21915 PF01274 Malate synthase JC777_21930 PF00892 EamA-like transporter family JC777_21935 PF02743 Cache domain JC777_21935 PF00672 HAMP domain JC777_21935 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JC777_21940 PF01435 Peptidase family M48 JC777_21940 PF16491 CAAX prenyl protease N-terminal, five membrane helices JC777_21960 PF00486 Transcriptional regulatory protein, C terminal JC777_21960 PF00072 Response regulator receiver domain JC777_21965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC777_21965 PF00512 His Kinase A (phospho-acceptor) domain JC777_21975 PF07968 Leukocidin/Hemolysin toxin family JC777_21980 PF00501 AMP-binding enzyme JC777_21980 PF13193 AMP-binding enzyme C-terminal domain JC777_21990 PF03099 Biotin/lipoate A/B protein ligase family JC777_21990 PF10437 Bacterial lipoate protein ligase C-terminus JC777_21995 PF12706 Beta-lactamase superfamily domain JC777_22005 PF00356 Bacterial regulatory proteins, lacI family JC777_22020 PF00535 Glycosyl transferase family 2 JC777_22030 PF17932 Tetracyclin repressor-like, C-terminal domain JC777_22030 PF00440 Bacterial regulatory proteins, tetR family JC777_22055 PF01593 Flavin containing amine oxidoreductase JC777_22060 PF00762 Ferrochelatase JC777_22065 PF01208 Uroporphyrinogen decarboxylase (URO-D) JC777_22070 PF00905 Penicillin binding protein transpeptidase domain JC777_22070 PF00912 Transglycosylase JC777_22075 PF03992 Antibiotic biosynthesis monooxygenase JC777_22085 PF03703 Bacterial PH domain JC777_22100 PF12787 EcsC protein family JC777_22105 PF05975 Bacterial ABC transporter protein EcsB JC777_22110 PF00005 ABC transporter JC777_22120 PF01230 HIT domain JC777_22125 PF12732 YtxH-like protein JC777_22130 PF01047 MarR family JC777_22150 PF01266 FAD dependent oxidoreductase JC777_22150 PF16901 C-terminal domain of alpha-glycerophosphate oxidase JC777_22155 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JC777_22155 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JC777_22160 PF00230 Major intrinsic protein JC777_22165 PF04309 Glycerol-3-phosphate responsive antiterminator JC777_22170 PF14147 Sporulation protein YhaL JC777_22175 PF03816 Cell envelope-related transcriptional attenuator domain JC777_22185 PF00072 Response regulator receiver domain JC777_22185 PF00486 Transcriptional regulatory protein, C terminal JC777_22190 PF00512 His Kinase A (phospho-acceptor) domain JC777_22190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC777_22190 PF00989 PAS fold JC777_22190 PF16736 Single Cache-like JC777_22200 PF00005 ABC transporter JC777_22205 PF12704 MacB-like periplasmic core domain JC777_22205 PF02687 FtsX-like permease family JC777_22340 PF05065 Phage capsid family JC777_22345 PF14550 Putative phage serine protease XkdF JC777_22360 PF17288 Terminase RNAseH like domain JC777_22360 PF04466 Phage terminase large subunit JC777_22365 PF10668 Phage terminase small subunit JC777_22380 PF00239 Resolvase, N terminal domain JC777_22380 PF02796 Helix-turn-helix domain of resolvase