locus-tag class description JC774_00005 PF01076 Plasmid recombination enzyme JC774_00010 PF12802 MarR family JC774_00030 PF00082 Subtilase family JC774_00035 PF02463 RecF/RecN/SMC N terminal domain JC774_00040 PF00589 Phage integrase family JC774_00065 PF00664 ABC transporter transmembrane region JC774_00065 PF00005 ABC transporter JC774_00170 PF00246 Zinc carboxypeptidase JC774_00170 PF08239 Bacterial SH3 domain JC774_00185 PF00571 CBS domain JC774_00265 PF05698 Bacterial trigger factor protein (TF) C-terminus JC774_00265 PF05697 Bacterial trigger factor protein (TF) JC774_00305 PF00873 AcrB/AcrD/AcrF family JC774_00310 PF00528 Binding-protein-dependent transport system inner membrane component JC774_00315 PF00528 Binding-protein-dependent transport system inner membrane component JC774_00320 PF12849 PBP superfamily domain JC774_00325 PF07670 Nucleoside recognition JC774_00325 PF02421 Ferrous iron transport protein B JC774_00325 PF17910 FeoB cytosolic helical domain JC774_00325 PF07664 Ferrous iron transport protein B C terminus JC774_00325 PF04023 FeoA domain JC774_00330 PF07670 Nucleoside recognition JC774_00330 PF02421 Ferrous iron transport protein B JC774_00330 PF17910 FeoB cytosolic helical domain JC774_00330 PF07664 Ferrous iron transport protein B C terminus JC774_00335 PF07670 Nucleoside recognition JC774_00335 PF17910 FeoB cytosolic helical domain JC774_00335 PF02421 Ferrous iron transport protein B JC774_00335 PF07664 Ferrous iron transport protein B C terminus JC774_00345 PF05504 Spore germination B3/ GerAC like, C-terminal JC774_00350 PF03845 Spore germination protein JC774_00355 PF03323 Bacillus/Clostridium GerA spore germination protein JC774_00360 PF00474 Sodium:solute symporter family JC774_00370 PF07687 Peptidase dimerisation domain JC774_00370 PF01546 Peptidase family M20/M25/M40 JC774_00375 PF13529 Peptidase_C39 like family JC774_00380 PF00324 Amino acid permease JC774_00385 PF02790 Cytochrome C oxidase subunit II, transmembrane domain JC774_00390 PF00115 Cytochrome C and Quinol oxidase polypeptide I JC774_00395 PF00510 Cytochrome c oxidase subunit III JC774_00405 PF02254 TrkA-N domain JC774_00405 PF02080 TrkA-C domain JC774_00405 PF00999 Sodium/hydrogen exchanger family JC774_00415 PF13673 Acetyltransferase (GNAT) domain JC774_00420 PF00324 Amino acid permease JC774_00435 PF05525 Branched-chain amino acid transport protein JC774_00440 PF00854 POT family JC774_00450 PF04203 Sortase domain JC774_00465 PF01381 Helix-turn-helix JC774_00470 PF01476 LysM domain JC774_00470 PF06725 3D domain JC774_00475 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JC774_00475 PF02743 Cache domain JC774_00475 PF00672 HAMP domain JC774_00490 PF04030 D-arabinono-1,4-lactone oxidase JC774_00490 PF01565 FAD binding domain JC774_00500 PF03372 Endonuclease/Exonuclease/phosphatase family JC774_00505 PF00882 Zinc dependent phospholipase C JC774_00515 PF00923 Transaldolase/Fructose-6-phosphate aldolase JC774_00520 PF13407 Periplasmic binding protein domain JC774_00525 PF02653 Branched-chain amino acid transport system / permease component JC774_00530 PF00005 ABC transporter JC774_00535 PF05025 RbsD / FucU transport protein family JC774_00540 PF00294 pfkB family carbohydrate kinase JC774_00545 PF00356 Bacterial regulatory proteins, lacI family JC774_00550 PF07690 Major Facilitator Superfamily JC774_00555 PF01047 MarR family JC774_00560 PF07690 Major Facilitator Superfamily JC774_00565 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JC774_00565 PF00005 ABC transporter JC774_00570 PF00005 ABC transporter JC774_00570 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JC774_00575 PF00528 Binding-protein-dependent transport system inner membrane component JC774_00580 PF00528 Binding-protein-dependent transport system inner membrane component JC774_00585 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JC774_00595 PF00582 Universal stress protein family JC774_00600 PF00916 Sulfate permease family JC774_00600 PF01740 STAS domain JC774_00610 PF00072 Response regulator receiver domain JC774_00610 PF00486 Transcriptional regulatory protein, C terminal JC774_00615 PF00672 HAMP domain JC774_00615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC774_00615 PF18698 Histidine kinase sensor domain JC774_00615 PF00512 His Kinase A (phospho-acceptor) domain JC774_00615 PF00989 PAS fold JC774_00625 PF00324 Amino acid permease JC774_00630 PF00528 Binding-protein-dependent transport system inner membrane component JC774_00635 PF00528 Binding-protein-dependent transport system inner membrane component JC774_00640 PF00497 Bacterial extracellular solute-binding proteins, family 3 JC774_00645 PF00005 ABC transporter JC774_00650 PF01235 Sodium:alanine symporter family JC774_00655 PF01636 Phosphotransferase enzyme family JC774_00660 PF13520 Amino acid permease JC774_00665 PF07728 AAA domain (dynein-related subfamily) JC774_00670 PF00092 von Willebrand factor type A domain JC774_00675 PF01370 NAD dependent epimerase/dehydratase family JC774_00680 PF00155 Aminotransferase class I and II JC774_00685 PF00854 POT family JC774_00690 PF08141 Small acid-soluble spore protein H family JC774_00695 PF01022 Bacterial regulatory protein, arsR family JC774_00700 PF02652 L-lactate permease JC774_00705 PF10415 Fumarase C C-terminus JC774_00705 PF00206 Lyase JC774_00710 PF00571 CBS domain JC774_00710 PF01595 Cyclin M transmembrane N-terminal domain JC774_00710 PF03471 Transporter associated domain JC774_00715 PF03816 Cell envelope-related transcriptional attenuator domain JC774_00720 PF04294 VanW like protein JC774_00735 PF00403 Heavy-metal-associated domain JC774_00740 PF00403 Heavy-metal-associated domain JC774_00755 PF07504 Fungalysin/Thermolysin Propeptide Motif JC774_00755 PF03413 Peptidase propeptide and YPEB domain JC774_00755 PF01447 Thermolysin metallopeptidase, catalytic domain JC774_00755 PF02868 Thermolysin metallopeptidase, alpha-helical domain JC774_00770 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain JC774_00770 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain JC774_00770 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family JC774_00775 PF00403 Heavy-metal-associated domain JC774_00780 PF01022 Bacterial regulatory protein, arsR family JC774_00790 PF13520 Amino acid permease JC774_00795 PF01262 Alanine dehydrogenase/PNT, C-terminal domain JC774_00795 PF05222 Alanine dehydrogenase/PNT, N-terminal domain JC774_00800 PF00672 HAMP domain JC774_00800 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JC774_00800 PF12729 Four helix bundle sensory module for signal transduction JC774_00810 PF07849 Protein of unknown function (DUF1641) JC774_00815 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region JC774_00815 PF01568 Molydopterin dinucleotide binding domain JC774_00815 PF00384 Molybdopterin oxidoreductase JC774_00815 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JC774_00815 PF00037 4Fe-4S binding domain JC774_00820 PF02634 FdhD/NarQ family JC774_00825 PF00486 Transcriptional regulatory protein, C terminal JC774_00825 PF00072 Response regulator receiver domain JC774_00830 PF00672 HAMP domain JC774_00830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC774_00830 PF18698 Histidine kinase sensor domain JC774_00830 PF00512 His Kinase A (phospho-acceptor) domain JC774_00830 PF00989 PAS fold JC774_00845 PF00390 Malic enzyme, N-terminal domain JC774_00845 PF03949 Malic enzyme, NAD binding domain JC774_00850 PF03390 2-hydroxycarboxylate transporter family JC774_00855 PF00072 Response regulator receiver domain JC774_00860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC774_00860 PF00989 PAS fold JC774_00860 PF17203 Single cache domain 3 JC774_00860 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain JC774_00865 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JC774_00865 PF00672 HAMP domain JC774_00865 PF02743 Cache domain JC774_00870 PF13529 Peptidase_C39 like family JC774_00900 PF00672 HAMP domain JC774_00900 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JC774_00900 PF02743 Cache domain JC774_00905 PF15975 Flotillin JC774_00905 PF01145 SPFH domain / Band 7 family JC774_00915 PF01752 Collagenase JC774_00915 PF08453 Peptidase family M9 N-terminal JC774_00915 PF18496 Collagenase G catalytic helper subdomain JC774_00920 PF02028 BCCT, betaine/carnitine/choline family transporter JC774_00925 PF00395 S-layer homology domain JC774_00950 PF01979 Amidohydrolase family JC774_00955 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JC774_00955 PF01411 tRNA synthetases class II (A) JC774_00955 PF02272 DHHA1 domain JC774_00965 PF01810 LysE type translocator JC774_00980 PF04285 Protein of unknown function (DUF444) JC774_00985 PF08298 PrkA AAA domain JC774_00985 PF06798 PrkA serine protein kinase C-terminal domain JC774_00990 PF00588 SpoU rRNA Methylase family JC774_00995 PF12671 Putative amidase domain JC774_01000 PF08331 Domain of unknown function (DUF1730) JC774_01010 PF13462 Thioredoxin JC774_01015 PF00905 Penicillin binding protein transpeptidase domain JC774_01015 PF00912 Transglycosylase JC774_01020 PF01709 Transcriptional regulator JC774_01040 PF04740 LXG domain of WXG superfamily JC774_01040 PF14436 Bacterial EndoU nuclease JC774_01045 PF18801 response regulator aspartate phosphatase H, N terminal JC774_01140 PF11023 Zinc-ribbon containing domain JC774_01145 PF01475 Ferric uptake regulator family JC774_01150 PF00578 AhpC/TSA family JC774_01155 PF07885 Ion channel JC774_01170 PF00005 ABC transporter JC774_01175 PF00202 Aminotransferase class-III JC774_01180 PF01645 Conserved region in glutamate synthase JC774_01180 PF00310 Glutamine amidotransferases class-II JC774_01180 PF04898 Glutamate synthase central domain JC774_01180 PF01493 GXGXG motif JC774_01185 PF06081 Aromatic acid exporter family member 1 JC774_01190 PF00005 ABC transporter JC774_01190 PF00664 ABC transporter transmembrane region JC774_01195 PF04167 Protein of unknown function (DUF402) JC774_01205 PF04259 Small, acid-soluble spore protein, gamma-type JC774_01220 PF14815 NUDIX domain JC774_01220 PF00730 HhH-GPD superfamily base excision DNA repair protein JC774_01225 PF04307 LexA-binding, inner membrane-associated putative hydrolase JC774_01230 PF14043 WVELL protein JC774_01235 PF08176 Small acid-soluble spore protein K family JC774_01245 PF08838 Protein of unknown function (DUF1811) JC774_01250 PF02631 RecX family JC774_01255 PF01979 Amidohydrolase family JC774_01270 PF04101 Glycosyltransferase family 28 C-terminal domain JC774_01270 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase JC774_01275 PF04055 Radical SAM superfamily JC774_01280 PF01228 Glycine radical JC774_01280 PF02901 Pyruvate formate lyase-like JC774_01285 PF01370 NAD dependent epimerase/dehydratase family JC774_01285 PF00551 Formyl transferase JC774_01285 PF02911 Formyl transferase, C-terminal domain JC774_01290 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain JC774_01290 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain JC774_01290 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain JC774_01295 PF00144 Beta-lactamase JC774_01300 PF00367 phosphotransferase system, EIIB JC774_01300 PF02378 Phosphotransferase system, EIIC JC774_01305 PF04960 Glutaminase JC774_01330 PF01416 tRNA pseudouridine synthase JC774_01335 PF01938 TRAM domain JC774_01335 PF05958 tRNA (Uracil-5-)-methyltransferase JC774_01340 PF00730 HhH-GPD superfamily base excision DNA repair protein JC774_01345 PF01522 Polysaccharide deacetylase JC774_01350 PF05681 Fumarate hydratase (Fumerase) JC774_01350 PF05683 Fumarase C-terminus JC774_01360 PF08756 YfkB-like domain JC774_01360 PF04055 Radical SAM superfamily JC774_01365 PF14167 YfkD-like protein JC774_01370 PF01699 Sodium/calcium exchanger protein JC774_01385 PF09335 SNARE associated Golgi protein JC774_01395 PF10502 Signal peptidase, peptidase S26 JC774_01405 PF00892 EamA-like transporter family JC774_01415 PF03631 Virulence factor BrkB JC774_01425 PF01451 Low molecular weight phosphotyrosine protein phosphatase JC774_01430 PF06569 Protein of unknown function (DUF1128) JC774_01440 PF05816 Toxic anion resistance protein (TelA) JC774_01445 PF14266 Putative component of 'biosynthetic module' JC774_01450 PF03741 Integral membrane protein TerC family JC774_01455 PF02342 TerD domain JC774_01460 PF02342 TerD domain JC774_01465 PF02342 TerD domain JC774_01470 PF00480 ROK family JC774_01475 PF09180 Prolyl-tRNA synthetase, C-terminal JC774_01475 PF03129 Anticodon binding domain JC774_01475 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JC774_01490 PF11700 Vacuole effluxer Atg22 like JC774_01500 PF00440 Bacterial regulatory proteins, tetR family JC774_01500 PF08360 QacR-like protein, C-terminal region JC774_01510 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase JC774_01530 PF00041 Fibronectin type III domain JC774_01530 PF00704 Glycosyl hydrolases family 18 JC774_01535 PF00005 ABC transporter JC774_01545 PF00528 Binding-protein-dependent transport system inner membrane component JC774_01550 PF01910 Thiamine-binding protein JC774_01555 PF00550 Phosphopantetheine attachment site JC774_01555 PF00975 Thioesterase domain JC774_01555 PF00501 AMP-binding enzyme JC774_01555 PF13193 AMP-binding enzyme C-terminal domain JC774_01555 PF00668 Condensation domain JC774_01560 PF00672 HAMP domain JC774_01560 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JC774_01565 PF03605 Anaerobic c4-dicarboxylate membrane transporter JC774_01575 PF02581 Thiamine monophosphate synthase JC774_01580 PF02110 Hydroxyethylthiazole kinase family JC774_01585 PF01497 Periplasmic binding protein JC774_01590 PF00005 ABC transporter JC774_01595 PF01032 FecCD transport family JC774_01600 PF01032 FecCD transport family JC774_01605 PF01751 Toprim domain JC774_01605 PF01131 DNA topoisomerase JC774_01610 PF01061 ABC-2 type transporter JC774_01615 PF03372 Endonuclease/Exonuclease/phosphatase family JC774_01620 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JC774_01620 PF00367 phosphotransferase system, EIIB JC774_01620 PF02378 Phosphotransferase system, EIIC JC774_01625 PF16657 Maltogenic Amylase, C-terminal domain JC774_01625 PF00128 Alpha amylase, catalytic domain JC774_01635 PF00027 Cyclic nucleotide-binding domain JC774_01635 PF13545 Crp-like helix-turn-helix domain JC774_01640 PF00696 Amino acid kinase family JC774_01645 PF13520 Amino acid permease JC774_01650 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JC774_01650 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JC774_01660 PF01316 Arginine repressor, DNA binding domain JC774_01660 PF02863 Arginine repressor, C-terminal domain JC774_01670 PF00672 HAMP domain JC774_01670 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JC774_01670 PF12729 Four helix bundle sensory module for signal transduction JC774_01675 PF00005 ABC transporter JC774_01680 PF00497 Bacterial extracellular solute-binding proteins, family 3 JC774_01685 PF00528 Binding-protein-dependent transport system inner membrane component JC774_01695 PF01266 FAD dependent oxidoreductase JC774_01695 PF00355 Rieske [2Fe-2S] domain JC774_01700 PF07690 Major Facilitator Superfamily JC774_01735 PF00989 PAS fold JC774_01735 PF00512 His Kinase A (phospho-acceptor) domain JC774_01735 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC774_01735 PF13188 PAS domain JC774_01735 PF13426 PAS domain JC774_01740 PF12728 Helix-turn-helix domain JC774_01750 PF07992 Pyridine nucleotide-disulphide oxidoreductase JC774_01755 PF01497 Periplasmic binding protein JC774_01760 PF01032 FecCD transport family JC774_01765 PF01032 FecCD transport family JC774_01775 PF01636 Phosphotransferase enzyme family JC774_01780 PF00578 AhpC/TSA family JC774_01785 PF07992 Pyridine nucleotide-disulphide oxidoreductase JC774_01785 PF13192 Thioredoxin domain JC774_01795 PF01207 Dihydrouridine synthase (Dus) JC774_01800 PF02475 Met-10+ like-protein JC774_01800 PF01938 TRAM domain JC774_01800 PF05958 tRNA (Uracil-5-)-methyltransferase JC774_01805 PF07662 Na+ dependent nucleoside transporter C-terminus JC774_01805 PF07670 Nucleoside recognition JC774_01805 PF01773 Na+ dependent nucleoside transporter N-terminus JC774_01815 PF02073 Thermophilic metalloprotease (M29) JC774_01820 PF00893 Small Multidrug Resistance protein JC774_01825 PF00171 Aldehyde dehydrogenase family JC774_01830 PF13520 Amino acid permease JC774_01835 PF00158 Sigma-54 interaction domain JC774_01840 PF00202 Aminotransferase class-III JC774_01845 PF13419 Haloacid dehalogenase-like hydrolase JC774_01855 PF00781 Diacylglycerol kinase catalytic domain JC774_01860 PF02934 GatB/GatE catalytic domain JC774_01860 PF02637 GatB domain JC774_01865 PF01425 Amidase JC774_01870 PF02686 Glu-tRNAGln amidotransferase C subunit JC774_01875 PF05360 yiaA/B two helix domain JC774_01890 PF03180 NLPA lipoprotein JC774_01895 PF00528 Binding-protein-dependent transport system inner membrane component JC774_01900 PF00005 ABC transporter JC774_01900 PF09383 NIL domain JC774_01905 PF00857 Isochorismatase family JC774_01910 PF00171 Aldehyde dehydrogenase family JC774_01915 PF01925 Sulfite exporter TauE/SafE JC774_01920 PF07537 CamS sex pheromone cAM373 precursor JC774_01925 PF12826 Helix-hairpin-helix motif JC774_01925 PF00533 BRCA1 C Terminus (BRCT) domain JC774_01925 PF01653 NAD-dependent DNA ligase adenylation domain JC774_01925 PF03120 NAD-dependent DNA ligase OB-fold domain JC774_01925 PF03119 NAD-dependent DNA ligase C4 zinc finger domain JC774_01930 PF00580 UvrD/REP helicase N-terminal domain JC774_01930 PF13361 UvrD-like helicase C-terminal domain JC774_01935 PF01884 PcrB family JC774_01955 PF03466 LysR substrate binding domain JC774_01955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JC774_01965 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain JC774_01965 PF02843 Phosphoribosylglycinamide synthetase, C domain JC774_01965 PF02844 Phosphoribosylglycinamide synthetase, N domain JC774_01970 PF01808 AICARFT/IMPCHase bienzyme JC774_01970 PF02142 MGS-like domain JC774_01975 PF00551 Formyl transferase JC774_01980 PF00586 AIR synthase related protein, N-terminal domain JC774_01980 PF02769 AIR synthase related protein, C-terminal domain JC774_01985 PF00156 Phosphoribosyl transferase domain JC774_01990 PF00586 AIR synthase related protein, N-terminal domain JC774_01990 PF02769 AIR synthase related protein, C-terminal domain JC774_01990 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain JC774_02000 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase JC774_02005 PF01259 SAICAR synthetase JC774_02010 PF10397 Adenylosuccinate lyase C-terminus JC774_02010 PF00206 Lyase JC774_02015 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain JC774_02015 PF02222 ATP-grasp domain JC774_02020 PF00731 AIR carboxylase JC774_02040 PF00892 EamA-like transporter family JC774_02060 PF00486 Transcriptional regulatory protein, C terminal JC774_02060 PF00072 Response regulator receiver domain JC774_02065 PF00512 His Kinase A (phospho-acceptor) domain JC774_02065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC774_02070 PF00005 ABC transporter JC774_02130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC774_02130 PF00512 His Kinase A (phospho-acceptor) domain JC774_02130 PF00989 PAS fold JC774_02130 PF16736 Single Cache-like JC774_02135 PF00072 Response regulator receiver domain JC774_02135 PF00486 Transcriptional regulatory protein, C terminal JC774_02140 PF00860 Permease family JC774_02145 PF00117 Glutamine amidotransferase class-I JC774_02145 PF00958 GMP synthase C terminal domain JC774_02145 PF02540 NAD synthase JC774_02150 PF00118 TCP-1/cpn60 chaperonin family JC774_02155 PF00166 Chaperonin 10 Kd subunit JC774_02160 PF02517 CPBP intramembrane metalloprotease JC774_02170 PF02629 CoA binding domain JC774_02170 PF06971 Putative DNA-binding protein N-terminus JC774_02175 PF00005 ABC transporter JC774_02175 PF16326 ABC transporter C-terminal domain JC774_02175 PF12848 ABC transporter JC774_02180 PF00814 Glycoprotease family JC774_02185 PF00583 Acetyltransferase (GNAT) family JC774_02190 PF00814 Glycoprotease family JC774_02195 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE JC774_02245 PF05697 Bacterial trigger factor protein (TF) JC774_02245 PF05698 Bacterial trigger factor protein (TF) C-terminus JC774_02285 PF10263 SprT-like family JC774_02295 PF09371 Tex-like protein N-terminal domain JC774_02295 PF17674 HHH domain JC774_02295 PF00575 S1 RNA binding domain JC774_02295 PF16921 Tex protein YqgF-like domain JC774_02300 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system JC774_02305 PF01402 Ribbon-helix-helix protein, copG family JC774_02310 PF01168 Alanine racemase, N-terminal domain JC774_02310 PF00842 Alanine racemase, C-terminal domain JC774_02320 PF01648 4'-phosphopantetheinyl transferase superfamily JC774_02325 PF01694 Rhomboid family JC774_02330 PF00271 Helicase conserved C-terminal domain JC774_02330 PF00270 DEAD/DEAH box helicase JC774_02335 PF08245 Mur ligase middle domain JC774_02335 PF02875 Mur ligase family, glutamate ligase domain JC774_02335 PF01225 Mur ligase family, catalytic domain JC774_02340 PF07478 D-ala D-ala ligase C-terminus JC774_02340 PF01820 D-ala D-ala ligase N-terminus JC774_02345 PF07690 Major Facilitator Superfamily JC774_02355 PF01557 Fumarylacetoacetate (FAA) hydrolase family JC774_02360 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JC774_02380 PF00005 ABC transporter JC774_02380 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JC774_02385 PF00005 ABC transporter JC774_02385 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JC774_02390 PF00528 Binding-protein-dependent transport system inner membrane component JC774_02390 PF12911 N-terminal TM domain of oligopeptide transport permease C JC774_02395 PF00528 Binding-protein-dependent transport system inner membrane component JC774_02400 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JC774_02420 PF00005 ABC transporter JC774_02425 PF00196 Bacterial regulatory proteins, luxR family JC774_02425 PF00072 Response regulator receiver domain JC774_02430 PF07730 Histidine kinase JC774_02455 PF18267 Rubredoxin NAD+ reductase C-terminal domain JC774_02455 PF07992 Pyridine nucleotide-disulphide oxidoreductase JC774_02455 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain JC774_02455 PF01077 Nitrite and sulphite reductase 4Fe-4S domain JC774_02455 PF04324 BFD-like [2Fe-2S] binding domain JC774_02460 PF00355 Rieske [2Fe-2S] domain JC774_02465 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JC774_02470 PF01903 CbiX JC774_02475 PF10414 Sirohaem synthase dimerisation region JC774_02475 PF14824 Sirohaem biosynthesis protein central JC774_02475 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JC774_02480 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JC774_02480 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JC774_02485 PF01553 Acyltransferase JC774_02490 PF12727 PBP superfamily domain JC774_02490 PF12728 Helix-turn-helix domain JC774_02500 PF00528 Binding-protein-dependent transport system inner membrane component JC774_02505 PF06800 Sugar transport protein JC774_02510 PF03807 NADP oxidoreductase coenzyme F420-dependent JC774_02510 PF14748 Pyrroline-5-carboxylate reductase dimerisation JC774_02515 PF00248 Aldo/keto reductase family JC774_02525 PF00440 Bacterial regulatory proteins, tetR family JC774_02535 PF12833 Helix-turn-helix domain JC774_02545 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JC774_02550 PF00005 ABC transporter JC774_02550 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JC774_02555 PF00005 ABC transporter JC774_02555 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JC774_02560 PF00528 Binding-protein-dependent transport system inner membrane component JC774_02560 PF12911 N-terminal TM domain of oligopeptide transport permease C JC774_02565 PF00528 Binding-protein-dependent transport system inner membrane component JC774_02575 PF07690 Major Facilitator Superfamily JC774_02585 PF01385 Probable transposase JC774_02585 PF12323 Helix-turn-helix domain JC774_02585 PF07282 Putative transposase DNA-binding domain JC774_02605 PF03313 Serine dehydratase alpha chain JC774_02610 PF03313 Serine dehydratase alpha chain JC774_02615 PF00899 ThiF family JC774_02615 PF00581 Rhodanese-like domain JC774_02620 PF07478 D-ala D-ala ligase C-terminus JC774_02620 PF01820 D-ala D-ala ligase N-terminus JC774_02680 PF02517 CPBP intramembrane metalloprotease JC774_02700 PF18801 response regulator aspartate phosphatase H, N terminal JC774_02765 PF01380 SIS domain JC774_02770 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JC774_02770 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JC774_02770 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JC774_02770 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JC774_02780 PF02457 DisA bacterial checkpoint controller nucleotide-binding JC774_02785 PF00491 Arginase family JC774_02790 PF02595 Glycerate kinase family JC774_02860 PF01522 Polysaccharide deacetylase JC774_02865 PF14089 KinB-signalling pathway activation in sporulation JC774_02870 PF17898 Spore germination GerD central core domain JC774_02875 PF10609 NUBPL iron-transfer P-loop NTPase JC774_02880 PF01520 N-acetylmuramoyl-L-alanine amidase JC774_02890 PF00380 Ribosomal protein S9/S16 JC774_02895 PF00572 Ribosomal protein L13 JC774_02900 PF01416 tRNA pseudouridine synthase JC774_02905 PF02361 Cobalt transport protein JC774_02910 PF00005 ABC transporter JC774_02915 PF00005 ABC transporter JC774_02920 PF01196 Ribosomal protein L17 JC774_02925 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain JC774_02925 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain JC774_02925 PF01000 RNA polymerase Rpb3/RpoA insert domain JC774_02930 PF00411 Ribosomal protein S11 JC774_02935 PF00416 Ribosomal protein S13/S18 JC774_02940 PF00444 Ribosomal protein L36 JC774_02945 PF01176 Translation initiation factor 1A / IF-1 JC774_02950 PF00557 Metallopeptidase family M24 JC774_02955 PF05191 Adenylate kinase, active site lid JC774_02960 PF00344 SecY translocase JC774_02965 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A JC774_02970 PF00327 Ribosomal protein L30p/L7e JC774_02975 PF03719 Ribosomal protein S5, C-terminal domain JC774_02975 PF00333 Ribosomal protein S5, N-terminal domain JC774_02980 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast JC774_02985 PF00347 Ribosomal protein L6 JC774_02990 PF00410 Ribosomal protein S8 JC774_02995 PF00253 Ribosomal protein S14p/S29e JC774_03000 PF00673 ribosomal L5P family C-terminus JC774_03000 PF00281 Ribosomal protein L5 JC774_03005 PF00467 KOW motif JC774_03005 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 JC774_03010 PF00238 Ribosomal protein L14p/L23e JC774_03015 PF00366 Ribosomal protein S17 JC774_03020 PF00831 Ribosomal L29 protein JC774_03025 PF00252 Ribosomal protein L16p/L10e JC774_03030 PF07650 KH domain JC774_03030 PF00189 Ribosomal protein S3, C-terminal domain JC774_03035 PF00237 Ribosomal protein L22p/L17e JC774_03040 PF00203 Ribosomal protein S19 JC774_03045 PF00181 Ribosomal Proteins L2, RNA binding domain JC774_03045 PF03947 Ribosomal Proteins L2, C-terminal domain JC774_03050 PF00276 Ribosomal protein L23 JC774_03055 PF00573 Ribosomal protein L4/L1 family JC774_03060 PF00297 Ribosomal protein L3 JC774_03065 PF00338 Ribosomal protein S10p/S20e JC774_03070 PF00009 Elongation factor Tu GTP binding domain JC774_03070 PF03143 Elongation factor Tu C-terminal domain JC774_03070 PF03144 Elongation factor Tu domain 2 JC774_03075 PF14492 Elongation Factor G, domain II JC774_03075 PF03764 Elongation factor G, domain IV JC774_03075 PF00009 Elongation factor Tu GTP binding domain JC774_03075 PF03144 Elongation factor Tu domain 2 JC774_03075 PF00679 Elongation factor G C-terminus JC774_03080 PF00177 Ribosomal protein S7p/S5e JC774_03085 PF00164 Ribosomal protein S12/S23 JC774_03090 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family JC774_03095 PF04997 RNA polymerase Rpb1, domain 1 JC774_03095 PF00623 RNA polymerase Rpb1, domain 2 JC774_03095 PF04983 RNA polymerase Rpb1, domain 3 JC774_03095 PF05000 RNA polymerase Rpb1, domain 4 JC774_03095 PF04998 RNA polymerase Rpb1, domain 5 JC774_03100 PF04561 RNA polymerase Rpb2, domain 2 JC774_03100 PF04563 RNA polymerase beta subunit JC774_03100 PF04565 RNA polymerase Rpb2, domain 3 JC774_03100 PF00562 RNA polymerase Rpb2, domain 6 JC774_03100 PF04560 RNA polymerase Rpb2, domain 7 JC774_03100 PF10385 RNA polymerase beta subunit external 1 domain JC774_03105 PF05175 Methyltransferase small domain JC774_03110 PF00542 Ribosomal protein L7/L12 C-terminal domain JC774_03110 PF16320 Ribosomal protein L7/L12 dimerisation domain JC774_03115 PF00466 Ribosomal protein L10 JC774_03120 PF00687 Ribosomal protein L1p/L10e family JC774_03125 PF03946 Ribosomal protein L11, N-terminal domain JC774_03125 PF00298 Ribosomal protein L11, RNA binding domain JC774_03130 PF00467 KOW motif JC774_03130 PF02357 Transcription termination factor nusG JC774_03140 PF00471 Ribosomal protein L33 JC774_03145 PF04542 Sigma-70 region 2 JC774_03145 PF08281 Sigma-70, region 4 JC774_03150 PF05991 YacP-like NYN domain JC774_03155 PF00588 SpoU rRNA Methylase family JC774_03155 PF08032 RNA 2'-O ribose methyltransferase substrate binding JC774_03160 PF00636 Ribonuclease III domain JC774_03165 PF09190 DALR domain JC774_03165 PF01406 tRNA synthetases class I (C) catalytic domain JC774_03170 PF06426 Serine acetyltransferase, N-terminal JC774_03170 PF00132 Bacterial transferase hexapeptide (six repeats) JC774_03175 PF00749 tRNA synthetases class I (E and Q), catalytic domain JC774_03180 PF02542 YgbB family JC774_03185 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase JC774_03195 PF02457 DisA bacterial checkpoint controller nucleotide-binding JC774_03195 PF10635 DisA bacterial checkpoint controller linker region JC774_03200 PF18073 Rubredoxin metal binding domain JC774_03205 PF00004 ATPase family associated with various cellular activities (AAA) JC774_03205 PF07724 AAA domain (Cdc48 subfamily) JC774_03205 PF17871 AAA lid domain JC774_03205 PF02861 Clp amino terminal domain, pathogenicity island component JC774_03205 PF10431 C-terminal, D2-small domain, of ClpB protein JC774_03210 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain JC774_03215 PF02151 UvrB/uvrC motif JC774_03220 PF17727 CtsR C-terminal dimerization domain JC774_03220 PF05848 CtsR N-terminal HTH domain JC774_03265 PF05698 Bacterial trigger factor protein (TF) C-terminus JC774_03265 PF05697 Bacterial trigger factor protein (TF) JC774_03300 PF00152 tRNA synthetases class II (D, K and N) JC774_03300 PF01336 OB-fold nucleic acid binding domain JC774_03305 PF01207 Dihydrouridine synthase (Dus) JC774_03310 PF01381 Helix-turn-helix JC774_03315 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) JC774_03320 PF02152 Dihydroneopterin aldolase JC774_03325 PF00809 Pterin binding enzyme JC774_03330 PF01063 Amino-transferase class IV JC774_03335 PF00117 Glutamine amidotransferase class-I JC774_03340 PF00425 chorismate binding enzyme JC774_03340 PF04715 Anthranilate synthase component I, N terminal region JC774_03345 PF00291 Pyridoxal-phosphate dependent enzyme JC774_03350 PF01430 Hsp33 protein JC774_03355 PF03309 Type III pantothenate kinase JC774_03360 PF17862 AAA+ lid domain JC774_03360 PF06480 FtsH Extracellular JC774_03360 PF01434 Peptidase family M41 JC774_03360 PF00004 ATPase family associated with various cellular activities (AAA) JC774_03365 PF00156 Phosphoribosyl transferase domain JC774_03370 PF01171 PP-loop family JC774_03370 PF09179 TilS substrate binding domain JC774_03370 PF11734 TilS substrate C-terminal domain JC774_03375 PF07228 Stage II sporulation protein E (SpoIIE) JC774_03390 PF00575 S1 RNA binding domain JC774_03400 PF09578 Spore cortex protein YabQ (Spore_YabQ) JC774_03405 PF07873 YabP family JC774_03410 PF01479 S4 domain JC774_03415 PF03819 MazG nucleotide pyrophosphohydrolase domain JC774_03415 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JC774_03420 PF01943 Polysaccharide biosynthesis protein JC774_03420 PF14667 Polysaccharide biosynthesis C-terminal domain JC774_03425 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin JC774_03425 PF15714 Stage V sporulation protein T C-terminal, transcription factor JC774_03430 PF17757 UvrB interaction domain JC774_03430 PF00271 Helicase conserved C-terminal domain JC774_03430 PF00270 DEAD/DEAH box helicase JC774_03430 PF03461 TRCF domain JC774_03430 PF02559 CarD-like/TRCF domain JC774_03440 PF01195 Peptidyl-tRNA hydrolase JC774_03445 PF14572 Phosphoribosyl synthetase-associated domain JC774_03445 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase JC774_03450 PF00132 Bacterial transferase hexapeptide (six repeats) JC774_03450 PF00483 Nucleotidyl transferase JC774_03455 PF04026 SpoVG JC774_03460 PF01042 Endoribonuclease L-PSP JC774_03465 PF00156 Phosphoribosyl transferase domain JC774_03465 PF09182 Bacterial purine repressor, N-terminal JC774_03470 PF08544 GHMP kinases C terminal JC774_03470 PF00288 GHMP kinases N terminal domain JC774_03475 PF00269 Small, acid-soluble spore proteins, alpha/beta type JC774_03480 PF06257 Biofilm formation stimulator VEG JC774_03485 PF05582 YabG peptidase U57 JC774_03490 PF00398 Ribosomal RNA adenine dimethylase JC774_03495 PF13662 Toprim domain JC774_03495 PF13331 Domain of unknown function (DUF4093) JC774_03500 PF01026 TatD related DNase JC774_03505 PF08264 Anticodon-binding domain of tRNA JC774_03505 PF09334 tRNA synthetases class I (M) JC774_03505 PF01588 Putative tRNA binding domain JC774_03510 PF18277 AbrB C-terminal domain JC774_03510 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin JC774_03515 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JC774_03520 PF01541 GIY-YIG catalytic domain JC774_03525 PF05175 Methyltransferase small domain JC774_03530 PF06156 Initiation control protein YabA JC774_03535 PF04468 PSP1 C-terminal conserved region JC774_03540 PF09115 DNA polymerase III, delta subunit, C terminal JC774_03545 PF02223 Thymidylate kinase JC774_03550 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain JC774_03550 PF01276 Orn/Lys/Arg decarboxylase, major domain JC774_03590 PF10704 Protein of unknown function (DUF2508) JC774_03595 PF02132 RecR protein JC774_03595 PF13662 Toprim domain JC774_03600 PF02575 YbaB/EbfC DNA-binding family JC774_03605 PF12169 DNA polymerase III subunits gamma and tau domain III JC774_03615 PF14437 MafB19-like deaminase JC774_03620 PF00857 Isochorismatase family JC774_03625 PF01712 Deoxynucleoside kinase JC774_03630 PF01712 Deoxynucleoside kinase JC774_03645 PF02403 Seryl-tRNA synthetase N-terminal domain JC774_03645 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JC774_03650 PF01174 SNO glutamine amidotransferase family JC774_03655 PF01680 SOR/SNZ family JC774_03660 PF00768 D-alanyl-D-alanine carboxypeptidase JC774_03660 PF07943 Penicillin-binding protein 5, C-terminal domain JC774_03670 PF00571 CBS domain JC774_03670 PF00478 IMP dehydrogenase / GMP reductase domain JC774_03675 PF14175 YaaC-like Protein JC774_03705 PF03989 DNA gyrase C-terminal domain, beta-propeller JC774_03705 PF00521 DNA gyrase/topoisomerase IV, subunit A JC774_03710 PF00204 DNA gyrase B JC774_03710 PF00986 DNA gyrase B subunit, carboxyl terminus JC774_03710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC774_03710 PF01751 Toprim domain JC774_03715 PF02463 RecF/RecN/SMC N terminal domain JC774_03725 PF02767 DNA polymerase III beta subunit, central domain JC774_03725 PF00712 DNA polymerase III beta subunit, N-terminal domain JC774_03725 PF02768 DNA polymerase III beta subunit, C-terminal domain JC774_03730 PF08299 Bacterial dnaA protein helix-turn-helix JC774_03730 PF11638 DnaA N-terminal domain JC774_03730 PF00308 Bacterial dnaA protein JC774_03735 PF00468 Ribosomal protein L34 JC774_03740 PF00825 Ribonuclease P JC774_03745 PF02096 60Kd inner membrane protein JC774_03750 PF14804 Jag N-terminus JC774_03750 PF01424 R3H domain JC774_03755 PF01926 50S ribosome-binding GTPase JC774_03755 PF12631 MnmE helical domain JC774_03755 PF10396 GTP-binding protein TrmE N-terminus JC774_03760 PF01134 Glucose inhibited division protein A JC774_03760 PF13932 GidA associated domain JC774_03765 PF02527 rRNA small subunit methyltransferase G JC774_03770 PF02195 ParB-like nuclease domain JC774_03770 PF17762 HTH domain found in ParB protein JC774_03775 PF13614 AAA domain JC774_03780 PF17762 HTH domain found in ParB protein JC774_03780 PF02195 ParB-like nuclease domain JC774_03785 PF06866 Protein of unknown function (DUF1256) JC774_03790 PF00924 Mechanosensitive ion channel JC774_03795 PF06107 Bacterial protein of unknown function (DUF951) JC774_03800 PF01926 50S ribosome-binding GTPase JC774_03800 PF06071 Protein of unknown function (DUF933) JC774_03805 PF01250 Ribosomal protein S6 JC774_03810 PF00436 Single-strand binding protein family JC774_03815 PF01084 Ribosomal protein S18 JC774_03820 PF09991 Predicted membrane protein (DUF2232) JC774_03825 PF01368 DHH family JC774_03825 PF02272 DHHA1 domain JC774_03830 PF03948 Ribosomal protein L9, C-terminal domain JC774_03830 PF01281 Ribosomal protein L9, N-terminal domain JC774_03835 PF00772 DnaB-like helicase N terminal domain JC774_03835 PF03796 DnaB-like helicase C terminal domain JC774_03840 PF00709 Adenylosuccinate synthetase JC774_03865 PF00486 Transcriptional regulatory protein, C terminal JC774_03865 PF00072 Response regulator receiver domain JC774_03870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC774_03870 PF13426 PAS domain JC774_03870 PF00512 His Kinase A (phospho-acceptor) domain JC774_03870 PF00672 HAMP domain JC774_03880 PF09648 YycH protein JC774_03885 PF00753 Metallo-beta-lactamase superfamily JC774_03890 PF13180 PDZ domain JC774_03900 PF02590 Predicted SPOUT methyltransferase JC774_03910 PF04740 LXG domain of WXG superfamily JC774_03910 PF14436 Bacterial EndoU nuclease JC774_03925 PF06013 Proteins of 100 residues with WXG JC774_03945 PF00478 IMP dehydrogenase / GMP reductase domain JC774_03975 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JC774_03975 PF08279 HTH domain JC774_03975 PF05043 Mga helix-turn-helix domain JC774_03975 PF00874 PRD domain JC774_03980 PF16363 GDP-mannose 4,6 dehydratase JC774_03990 PF02777 Iron/manganese superoxide dismutases, C-terminal domain JC774_03990 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain JC774_03995 PF02898 Nitric oxide synthase, oxygenase domain JC774_04000 PF07690 Major Facilitator Superfamily JC774_04010 PF04397 LytTr DNA-binding domain JC774_04010 PF00072 Response regulator receiver domain JC774_04015 PF03788 LrgA family JC774_04020 PF04172 LrgB-like family JC774_04025 PF01594 AI-2E family transporter JC774_04030 PF01625 Peptide methionine sulfoxide reductase JC774_04030 PF01641 SelR domain JC774_04035 PF00873 AcrB/AcrD/AcrF family JC774_04040 PF00440 Bacterial regulatory proteins, tetR family JC774_04045 PF00005 ABC transporter JC774_04045 PF12848 ABC transporter JC774_04050 PF00535 Glycosyl transferase family 2 JC774_04065 PF00535 Glycosyl transferase family 2 JC774_04080 PF00535 Glycosyl transferase family 2 JC774_04085 PF03061 Thioesterase superfamily JC774_04100 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JC774_04105 PF03458 UPF0126 domain JC774_04115 PF13439 Glycosyltransferase Family 4 JC774_04115 PF00534 Glycosyl transferases group 1 JC774_04120 PF03808 Glycosyl transferase WecB/TagA/CpsF family JC774_04125 PF07690 Major Facilitator Superfamily JC774_04130 PF04397 LytTr DNA-binding domain JC774_04130 PF00072 Response regulator receiver domain JC774_04135 PF13722 5TM C-terminal transporter carbon starvation CstA JC774_04135 PF02554 Carbon starvation protein CstA JC774_04145 PF08543 Phosphomethylpyrimidine kinase JC774_04155 PF01053 Cys/Met metabolism PLP-dependent enzyme JC774_04160 PF04204 Homoserine O-succinyltransferase JC774_04165 PF01842 ACT domain JC774_04165 PF00742 Homoserine dehydrogenase JC774_04165 PF03447 Homoserine dehydrogenase, NAD binding domain JC774_04170 PF13472 GDSL-like Lipase/Acylhydrolase family JC774_04175 PF00005 ABC transporter JC774_04180 PF12679 ABC-2 family transporter protein JC774_04185 PF03167 Uracil DNA glycosylase superfamily JC774_04190 PF12823 Domain of unknown function (DUF3817) JC774_04200 PF00860 Permease family JC774_04205 PF02254 TrkA-N domain JC774_04205 PF07885 Ion channel JC774_04215 PF04241 Protein of unknown function (DUF423) JC774_04220 PF09671 Spore coat protein (Spore_GerQ) JC774_04225 PF07486 Cell Wall Hydrolase JC774_04230 PF07943 Penicillin-binding protein 5, C-terminal domain JC774_04230 PF00768 D-alanyl-D-alanine carboxypeptidase JC774_04235 PF06778 Chlorite dismutase JC774_04240 PF01515 Phosphate acetyl/butaryl transferase JC774_04245 PF03099 Biotin/lipoate A/B protein ligase family JC774_04255 PF07293 Protein of unknown function (DUF1450) JC774_04260 PF01032 FecCD transport family JC774_04265 PF01032 FecCD transport family JC774_04270 PF00005 ABC transporter JC774_04275 PF01497 Periplasmic binding protein JC774_04280 PF01966 HD domain JC774_04285 PF01361 Tautomerase enzyme JC774_04290 PF02163 Peptidase family M50 JC774_04295 PF08741 YwhD family JC774_04300 PF00905 Penicillin binding protein transpeptidase domain JC774_04300 PF00912 Transglycosylase JC774_04305 PF03009 Glycerophosphoryl diester phosphodiesterase family JC774_04310 PF13411 MerR HTH family regulatory protein JC774_04315 PF07690 Major Facilitator Superfamily JC774_04320 PF17284 Spermidine synthase tetramerisation domain JC774_04325 PF00491 Arginase family JC774_04340 PF02016 LD-carboxypeptidase N-terminal domain JC774_04340 PF17676 LD-carboxypeptidase C-terminal domain JC774_04345 PF09148 Domain of unknown function (DUF1934) JC774_04350 PF05746 DALR anticodon binding domain JC774_04350 PF03485 Arginyl tRNA synthetase N terminal domain JC774_04350 PF00750 tRNA synthetases class I (R) JC774_04360 PF02225 PA domain JC774_04360 PF04389 Peptidase family M28 JC774_04365 PF00557 Metallopeptidase family M24 JC774_04370 PF00005 ABC transporter JC774_04380 PF07730 Histidine kinase JC774_04380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC774_04385 PF00196 Bacterial regulatory proteins, luxR family JC774_04385 PF00072 Response regulator receiver domain JC774_04400 PF13091 PLD-like domain JC774_04405 PF02754 Cysteine-rich domain JC774_04405 PF13183 4Fe-4S dicluster domain JC774_04410 PF00108 Thiolase, N-terminal domain JC774_04410 PF02803 Thiolase, C-terminal domain JC774_04415 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JC774_04415 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JC774_04420 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JC774_04420 PF02770 Acyl-CoA dehydrogenase, middle domain JC774_04420 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JC774_04425 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JC774_04425 PF02770 Acyl-CoA dehydrogenase, middle domain JC774_04425 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JC774_04435 PF05066 HB1, ASXL, restriction endonuclease HTH domain JC774_04440 PF00117 Glutamine amidotransferase class-I JC774_04440 PF06418 CTP synthase N-terminus JC774_04445 PF10740 Domain of unknown function (DUF2529) JC774_04450 PF00072 Response regulator receiver domain JC774_04455 PF01116 Fructose-bisphosphate aldolase class-II JC774_04460 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JC774_04465 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded JC774_04470 PF07497 Rho termination factor, RNA-binding domain JC774_04470 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JC774_04470 PF07498 Rho termination factor, N-terminal domain JC774_04475 PF01197 Ribosomal protein L31 JC774_04480 PF00265 Thymidine kinase JC774_04485 PF00472 RF-1 domain JC774_04485 PF03462 PCRF domain JC774_04490 PF13847 Methyltransferase domain JC774_04490 PF17827 PrmC N-terminal domain JC774_04495 PF09551 Stage II sporulation protein R (spore_II_R) JC774_04505 PF01300 Telomere recombination JC774_04505 PF03481 Putative GTP-binding controlling metal-binding JC774_04510 PF02659 Putative manganese efflux pump JC774_04520 PF01613 Flavin reductase like domain JC774_04525 PF07681 DoxX JC774_04530 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JC774_04540 PF01451 Low molecular weight phosphotyrosine protein phosphatase JC774_04545 PF02502 Ribose/Galactose Isomerase JC774_04550 PF04260 Protein of unknown function (DUF436) JC774_04555 PF00464 Serine hydroxymethyltransferase JC774_04575 PF03899 ATP synthase I chain JC774_04580 PF00119 ATP synthase A chain JC774_04585 PF00137 ATP synthase subunit C JC774_04590 PF00430 ATP synthase B/B' CF(0) JC774_04595 PF00213 ATP synthase delta (OSCP) subunit JC774_04600 PF02874 ATP synthase alpha/beta family, beta-barrel domain JC774_04600 PF00306 ATP synthase alpha/beta chain, C terminal domain JC774_04600 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JC774_04605 PF00231 ATP synthase JC774_04610 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JC774_04610 PF02874 ATP synthase alpha/beta family, beta-barrel domain JC774_04615 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain JC774_04615 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain JC774_04630 PF00563 EAL domain JC774_04630 PF00990 Diguanylate cyclase, GGDEF domain JC774_04630 PF03707 Bacterial signalling protein N terminal repeat JC774_04640 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 JC774_04645 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit JC774_04650 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit JC774_04655 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit JC774_04660 PF00146 NADH dehydrogenase JC774_04670 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 JC774_04675 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L JC774_04680 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus JC774_04680 PF01010 NADH-dehyrogenase subunit F, TMs, (complex I) C-terminus JC774_04680 PF00361 Proton-conducting membrane transporter JC774_04685 PF00361 Proton-conducting membrane transporter JC774_04690 PF00361 Proton-conducting membrane transporter JC774_04695 PF06612 Protein of unknown function (DUF1146) JC774_04705 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JC774_04710 PF08486 Stage II sporulation protein JC774_04715 PF00072 Response regulator receiver domain JC774_04715 PF04397 LytTr DNA-binding domain JC774_04720 PF00005 ABC transporter JC774_04730 PF01551 Peptidase family M23 JC774_04740 PF12116 Stage III sporulation protein D JC774_04750 PF01467 Cytidylyltransferase-like JC774_04760 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase JC774_04765 PF01061 ABC-2 type transporter JC774_04770 PF00005 ABC transporter JC774_04770 PF08239 Bacterial SH3 domain JC774_04775 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase JC774_04780 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase JC774_04780 PF00535 Glycosyl transferase family 2 JC774_04785 PF00534 Glycosyl transferases group 1 JC774_04785 PF13439 Glycosyltransferase Family 4 JC774_04795 PF00483 Nucleotidyl transferase JC774_04800 PF07977 FabA-like domain JC774_04805 PF03816 Cell envelope-related transcriptional attenuator domain JC774_04820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC774_04820 PF16736 Single Cache-like JC774_04820 PF00989 PAS fold JC774_04820 PF00512 His Kinase A (phospho-acceptor) domain JC774_04835 PF07690 Major Facilitator Superfamily JC774_04840 PF00395 S-layer homology domain JC774_04840 PF01520 N-acetylmuramoyl-L-alanine amidase JC774_04855 PF00005 ABC transporter JC774_04860 PF12704 MacB-like periplasmic core domain JC774_04860 PF02687 FtsX-like permease family JC774_04865 PF04893 Yip1 domain JC774_04900 PF00271 Helicase conserved C-terminal domain JC774_04900 PF12419 SNF2 Helicase protein JC774_04900 PF00176 SNF2 family N-terminal domain JC774_04905 PF04434 SWIM zinc finger JC774_04920 PF01476 LysM domain JC774_04920 PF06725 3D domain JC774_04925 PF02028 BCCT, betaine/carnitine/choline family transporter JC774_04940 PF07662 Na+ dependent nucleoside transporter C-terminus JC774_04940 PF01773 Na+ dependent nucleoside transporter N-terminus JC774_04945 PF00877 NlpC/P60 family JC774_04945 PF01476 LysM domain JC774_04950 PF01063 Amino-transferase class IV JC774_04955 PF00884 Sulfatase JC774_04965 PF09988 Uncharacterized metal-binding protein (DUF2227) JC774_04970 PF02652 L-lactate permease JC774_04975 PF13667 ThiC-associated domain JC774_04975 PF01964 Radical SAM ThiC family JC774_04980 PF02322 Cytochrome bd terminal oxidase subunit II JC774_04985 PF01654 Cytochrome bd terminal oxidase subunit I JC774_05000 PF00375 Sodium:dicarboxylate symporter family JC774_05005 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit JC774_05010 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JC774_05015 PF02378 Phosphotransferase system, EIIC JC774_05020 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit JC774_05025 PF11975 Family 4 glycosyl hydrolase C-terminal domain JC774_05025 PF02056 Family 4 glycosyl hydrolase JC774_05030 PF04794 YdjC-like protein JC774_05040 PF03610 PTS system fructose IIA component JC774_05040 PF00874 PRD domain JC774_05040 PF00158 Sigma-54 interaction domain JC774_05045 PF01522 Polysaccharide deacetylase JC774_05050 PF00953 Glycosyl transferase family 4 JC774_05055 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain JC774_05055 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain JC774_05055 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain JC774_05065 PF02350 UDP-N-acetylglucosamine 2-epimerase JC774_05095 PF18801 response regulator aspartate phosphatase H, N terminal JC774_05115 PF03816 Cell envelope-related transcriptional attenuator domain JC774_05120 PF09186 Domain of unknown function (DUF1949) JC774_05120 PF01205 Uncharacterized protein family UPF0029 JC774_05125 PF02645 Uncharacterised protein, DegV family COG1307 JC774_05130 PF01638 HxlR-like helix-turn-helix JC774_05135 PF00877 NlpC/P60 family JC774_05135 PF01476 LysM domain JC774_05145 PF00239 Resolvase, N terminal domain JC774_05145 PF02796 Helix-turn-helix domain of resolvase JC774_05150 PF00717 Peptidase S24-like JC774_05150 PF01726 LexA DNA binding domain JC774_05315 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system JC774_05425 PF05105 Bacteriophage holin family JC774_05430 PF01520 N-acetylmuramoyl-L-alanine amidase JC774_05430 PF08239 Bacterial SH3 domain JC774_05475 PF00717 Peptidase S24-like JC774_05475 PF01726 LexA DNA binding domain JC774_05500 PF00313 'Cold-shock' DNA-binding domain JC774_05505 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus JC774_05505 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein JC774_05510 PF02810 SEC-C motif JC774_05510 PF01043 SecA preprotein cross-linking domain JC774_05510 PF07516 SecA Wing and Scaffold domain JC774_05510 PF07517 SecA DEAD-like domain JC774_05520 PF13442 Cytochrome C oxidase, cbb3-type, subunit III JC774_05525 PF00005 ABC transporter JC774_05530 PF02687 FtsX-like permease family JC774_05530 PF18075 FtsX extracellular domain JC774_05535 PF01471 Putative peptidoglycan binding domain JC774_05535 PF03572 Peptidase family S41 JC774_05535 PF17820 PDZ domain JC774_05540 PF17820 PDZ domain JC774_05555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JC774_05555 PF03466 LysR substrate binding domain JC774_05560 PF03601 Conserved hypothetical protein 698 JC774_05575 PF13411 MerR HTH family regulatory protein JC774_05585 PF17757 UvrB interaction domain JC774_05585 PF04851 Type III restriction enzyme, res subunit JC774_05585 PF02151 UvrB/uvrC motif JC774_05585 PF00271 Helicase conserved C-terminal domain JC774_05585 PF12344 Ultra-violet resistance protein B JC774_05590 PF17760 UvrA interaction domain JC774_05590 PF17755 UvrA DNA-binding domain JC774_05590 PF00005 ABC transporter JC774_05600 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV JC774_05605 PF07475 HPr Serine kinase C-terminal domain JC774_05605 PF02603 HPr Serine kinase N terminus JC774_05610 PF01790 Prolipoprotein diacylglyceryl transferase JC774_05615 PF13419 Haloacid dehalogenase-like hydrolase JC774_05620 PF14602 Hexapeptide repeat of succinyl-transferase JC774_05630 PF07992 Pyridine nucleotide-disulphide oxidoreductase JC774_05640 PF00293 NUDIX domain JC774_05645 PF03668 P-loop ATPase protein family JC774_05650 PF01933 Uncharacterised protein family UPF0052 JC774_05655 PF02650 WhiA C-terminal HTH domain JC774_05655 PF14527 WhiA LAGLIDADG-like domain JC774_05655 PF10298 WhiA N-terminal LAGLIDADG-like domain JC774_05660 PF00381 PTS HPr component phosphorylation site JC774_05665 PF00574 Clp protease JC774_05670 PF04239 Protein of unknown function (DUF421) JC774_05680 PF03862 SpoVAC/SpoVAEB sporulation membrane protein JC774_05685 PF07451 Stage V sporulation protein AD (SpoVAD) JC774_05690 PF03862 SpoVAC/SpoVAEB sporulation membrane protein JC774_05725 PF18801 response regulator aspartate phosphatase H, N terminal JC774_05735 PF00309 Sigma-54 factor, Activator interacting domain (AID) JC774_05735 PF04963 Sigma-54 factor, core binding domain JC774_05735 PF04552 Sigma-54, DNA binding domain JC774_05745 PF04198 Putative sugar-binding domain JC774_05750 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain JC774_05750 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain JC774_05755 PF00162 Phosphoglycerate kinase JC774_05760 PF00121 Triosephosphate isomerase JC774_05765 PF06415 BPG-independent PGAM N-terminus (iPGM_N) JC774_05765 PF01676 Metalloenzyme superfamily JC774_05770 PF00113 Enolase, C-terminal TIM barrel domain JC774_05770 PF03952 Enolase, N-terminal domain JC774_05775 PF03788 LrgA family JC774_05780 PF04172 LrgB-like family JC774_05785 PF03840 Preprotein translocase SecG subunit JC774_05790 PF12146 Serine aminopeptidase, S33 JC774_05795 PF00773 RNB domain JC774_05795 PF00575 S1 RNA binding domain JC774_05795 PF08206 Ribonuclease B OB domain JC774_05795 PF17876 Cold shock domain JC774_05800 PF01668 SmpB protein JC774_05815 PF03323 Bacillus/Clostridium GerA spore germination protein JC774_05820 PF05504 Spore germination B3/ GerAC like, C-terminal JC774_05835 PF03845 Spore germination protein JC774_05840 PF06146 Phosphate-starvation-inducible E JC774_05845 PF02311 AraC-like ligand binding domain JC774_05845 PF12833 Helix-turn-helix domain JC774_05850 PF01588 Putative tRNA binding domain JC774_05855 PF10710 Protein of unknown function (DUF2512) JC774_05860 PF02537 CrcB-like protein, Camphor Resistance (CrcB) JC774_05865 PF02537 CrcB-like protein, Camphor Resistance (CrcB) JC774_05875 PF01565 FAD binding domain JC774_05875 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain JC774_05880 PF07992 Pyridine nucleotide-disulphide oxidoreductase JC774_05885 PF07849 Protein of unknown function (DUF1641) JC774_05895 PF13460 NAD(P)H-binding JC774_05900 PF01235 Sodium:alanine symporter family JC774_05905 PF07662 Na+ dependent nucleoside transporter C-terminus JC774_05905 PF01773 Na+ dependent nucleoside transporter N-terminus JC774_05910 PF07662 Na+ dependent nucleoside transporter C-terminus JC774_05910 PF01773 Na+ dependent nucleoside transporter N-terminus JC774_05915 PF05043 Mga helix-turn-helix domain JC774_05915 PF08280 M protein trans-acting positive regulator (MGA) HTH domain JC774_05915 PF00874 PRD domain JC774_05930 PF00005 ABC transporter JC774_05935 PF00950 ABC 3 transport family JC774_05940 PF01297 Zinc-uptake complex component A periplasmic JC774_05965 PF03641 Possible lysine decarboxylase JC774_05970 PF00210 Ferritin-like domain JC774_05980 PF01047 MarR family JC774_05985 PF17954 Quercetinase C-terminal cupin domain JC774_05985 PF02678 Pirin JC774_05990 PF02868 Thermolysin metallopeptidase, alpha-helical domain JC774_05990 PF01447 Thermolysin metallopeptidase, catalytic domain JC774_05990 PF03413 Peptidase propeptide and YPEB domain JC774_05990 PF07504 Fungalysin/Thermolysin Propeptide Motif JC774_05995 PF01883 Iron-sulfur cluster assembly protein JC774_06000 PF02743 Cache domain JC774_06000 PF00672 HAMP domain JC774_06000 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JC774_06005 PF02743 Cache domain JC774_06005 PF00672 HAMP domain JC774_06005 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JC774_06010 PF00989 PAS fold JC774_06010 PF00512 His Kinase A (phospho-acceptor) domain JC774_06010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC774_06010 PF16736 Single Cache-like JC774_06015 PF00072 Response regulator receiver domain JC774_06015 PF00486 Transcriptional regulatory protein, C terminal JC774_06020 PF17969 L,D-transpeptidase C-terminal domain JC774_06020 PF03734 L,D-transpeptidase catalytic domain JC774_06030 PF09335 SNARE associated Golgi protein JC774_06040 PF00005 ABC transporter JC774_06055 PF00486 Transcriptional regulatory protein, C terminal JC774_06055 PF00072 Response regulator receiver domain JC774_06060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC774_06060 PF00512 His Kinase A (phospho-acceptor) domain JC774_06060 PF13426 PAS domain JC774_06060 PF00672 HAMP domain JC774_06070 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JC774_06070 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JC774_06080 PF02096 60Kd inner membrane protein JC774_06085 PF13520 Amino acid permease JC774_06105 PF02743 Cache domain JC774_06105 PF00672 HAMP domain JC774_06105 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JC774_06110 PF01910 Thiamine-binding protein JC774_06125 PF01619 Proline dehydrogenase JC774_06130 PF00768 D-alanyl-D-alanine carboxypeptidase JC774_06130 PF07943 Penicillin-binding protein 5, C-terminal domain JC774_06135 PF14115 YuzL-like protein JC774_06140 PF00378 Enoyl-CoA hydratase/isomerase JC774_06140 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JC774_06140 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JC774_06145 PF00108 Thiolase, N-terminal domain JC774_06145 PF02803 Thiolase, C-terminal domain JC774_06150 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JC774_06150 PF02770 Acyl-CoA dehydrogenase, middle domain JC774_06150 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JC774_06175 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain JC774_06175 PF00056 lactate/malate dehydrogenase, NAD binding domain JC774_06195 PF03960 ArsC family JC774_06200 PF01597 Glycine cleavage H-protein JC774_06205 PF01751 Toprim domain JC774_06210 PF00085 Thioredoxin JC774_06220 PF00005 ABC transporter JC774_06220 PF09383 NIL domain JC774_06225 PF00528 Binding-protein-dependent transport system inner membrane component JC774_06230 PF03180 NLPA lipoprotein JC774_06235 PF00005 ABC transporter JC774_06240 PF01458 Uncharacterized protein family (UPF0051) JC774_06245 PF00266 Aminotransferase class-V JC774_06250 PF01592 NifU-like N terminal domain JC774_06255 PF01458 Uncharacterized protein family (UPF0051) JC774_06270 PF02872 5'-nucleotidase, C-terminal domain JC774_06275 PF08827 Domain of unknown function (DUF1805) JC774_06280 PF09560 Sporulation protein YunB (Spo_YunB) JC774_06285 PF01551 Peptidase family M23 JC774_06290 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family JC774_06290 PF04055 Radical SAM superfamily JC774_06305 PF10086 YhfC intramembrane metalloprotease JC774_06310 PF13411 MerR HTH family regulatory protein JC774_06310 PF07739 TipAS antibiotic-recognition domain JC774_06320 PF06265 Protein of unknown function (DUF1027) JC774_06330 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded JC774_06335 PF01934 Protein of unknown function DUF86 JC774_06345 PF13344 Haloacid dehalogenase-like hydrolase JC774_06350 PF04608 Phosphatidylglycerophosphatase A JC774_06360 PF01106 NifU-like domain JC774_06365 PF07315 Protein of unknown function (DUF1462) JC774_06375 PF11188 Protein of unknown function (DUF2975) JC774_06380 PF13443 Cro/C1-type HTH DNA-binding domain JC774_06390 PF08274 PhnA Zinc-Ribbon JC774_06390 PF03831 PhnA domain JC774_06395 PF07992 Pyridine nucleotide-disulphide oxidoreductase JC774_06400 PF07293 Protein of unknown function (DUF1450) JC774_06405 PF01773 Na+ dependent nucleoside transporter N-terminus JC774_06405 PF07662 Na+ dependent nucleoside transporter C-terminus JC774_06410 PF01678 Diaminopimelate epimerase JC774_06415 PF01521 Iron-sulphur cluster biosynthesis JC774_06425 PF04463 Protein of unknown function (DUF523) JC774_06440 PF07992 Pyridine nucleotide-disulphide oxidoreductase JC774_06445 PF07992 Pyridine nucleotide-disulphide oxidoreductase JC774_06450 PF17369 Family of unknown function (DUF5391) JC774_06455 PF13344 Haloacid dehalogenase-like hydrolase JC774_06455 PF00293 NUDIX domain JC774_06465 PF06725 3D domain JC774_06475 PF00883 Cytosol aminopeptidase family, catalytic domain JC774_06475 PF02789 Cytosol aminopeptidase family, N-terminal domain JC774_06480 PF02457 DisA bacterial checkpoint controller nucleotide-binding JC774_06480 PF10372 Bacterial membrane-spanning protein N-terminus JC774_06485 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JC774_06485 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JC774_06485 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JC774_06485 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JC774_06490 PF00483 Nucleotidyl transferase JC774_06495 PF02632 BioY family JC774_06505 PF03061 Thioesterase superfamily JC774_06520 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JC774_06520 PF03129 Anticodon binding domain JC774_06525 PF03600 Citrate transporter JC774_06530 PF00929 Exonuclease JC774_06535 PF08810 Kinase associated protein B JC774_06550 PF00080 Copper/zinc superoxide dismutase (SODC) JC774_06555 PF00155 Aminotransferase class I and II JC774_06565 PF00561 alpha/beta hydrolase fold JC774_06565 PF08386 TAP-like protein JC774_06570 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JC774_06570 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JC774_06575 PF01037 Lrp/AsnC ligand binding domain JC774_06580 PF00155 Aminotransferase class I and II JC774_06585 PF00575 S1 RNA binding domain JC774_06590 PF04070 Domain of unknown function (DUF378) JC774_06595 PF00342 Phosphoglucose isomerase JC774_06600 PF08868 YugN-like family JC774_06605 PF07885 Ion channel JC774_06605 PF02254 TrkA-N domain JC774_06610 PF02308 MgtC family JC774_06645 PF05698 Bacterial trigger factor protein (TF) C-terminus JC774_06645 PF05697 Bacterial trigger factor protein (TF) JC774_06740 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain JC774_06740 PF00056 lactate/malate dehydrogenase, NAD binding domain JC774_06745 PF00128 Alpha amylase, catalytic domain JC774_06745 PF02806 Alpha amylase, C-terminal all-beta domain JC774_06745 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) JC774_06750 PF00483 Nucleotidyl transferase JC774_06755 PF00483 Nucleotidyl transferase JC774_06760 PF00534 Glycosyl transferases group 1 JC774_06760 PF08323 Starch synthase catalytic domain JC774_06765 PF00343 Carbohydrate phosphorylase JC774_06780 PF00313 'Cold-shock' DNA-binding domain JC774_06785 PF01258 Prokaryotic dksA/traR C4-type zinc finger JC774_06790 PF01040 UbiA prenyltransferase family JC774_06795 PF00425 chorismate binding enzyme JC774_06800 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JC774_06800 PF16582 Middle domain of thiamine pyrophosphate JC774_06800 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JC774_06805 PF12697 Alpha/beta hydrolase family JC774_06810 PF00378 Enoyl-CoA hydratase/isomerase JC774_06815 PF00501 AMP-binding enzyme JC774_06815 PF13193 AMP-binding enzyme C-terminal domain JC774_06820 PF13378 Enolase C-terminal domain-like JC774_06820 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain JC774_06835 PF02687 FtsX-like permease family JC774_06840 PF00005 ABC transporter JC774_06845 PF02687 FtsX-like permease family JC774_06850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC774_06855 PF00486 Transcriptional regulatory protein, C terminal JC774_06855 PF00072 Response regulator receiver domain JC774_06865 PF00005 ABC transporter JC774_06870 PF00781 Diacylglycerol kinase catalytic domain JC774_06875 PF00156 Phosphoribosyl transferase domain JC774_06890 PF09515 Thiamine transporter protein (Thia_YuaJ) JC774_06900 PF07664 Ferrous iron transport protein B C terminus JC774_06900 PF17910 FeoB cytosolic helical domain JC774_06900 PF02421 Ferrous iron transport protein B JC774_06900 PF07670 Nucleoside recognition JC774_06915 PF04012 PspA/IM30 family JC774_06945 PF02322 Cytochrome bd terminal oxidase subunit II JC774_06950 PF01654 Cytochrome bd terminal oxidase subunit I JC774_06955 PF00484 Carbonic anhydrase JC774_06960 PF01809 Putative membrane protein insertion efficiency factor JC774_06965 PF02664 S-Ribosylhomocysteinase (LuxS) JC774_06975 PF00293 NUDIX domain JC774_06990 PF00528 Binding-protein-dependent transport system inner membrane component JC774_06995 PF00005 ABC transporter JC774_07015 PF00884 Sulfatase JC774_07020 PF01022 Bacterial regulatory protein, arsR family JC774_07025 PF01471 Putative peptidoglycan binding domain JC774_07025 PF01510 N-acetylmuramoyl-L-alanine amidase JC774_07030 PF01614 Bacterial transcriptional regulator JC774_07030 PF09339 IclR helix-turn-helix domain JC774_07035 PF08125 Mannitol dehydrogenase C-terminal domain JC774_07035 PF01232 Mannitol dehydrogenase Rossmann domain JC774_07040 PF03786 D-mannonate dehydratase (UxuA) JC774_07045 PF02447 GntP family permease JC774_07050 PF01081 KDPG and KHG aldolase JC774_07065 PF00128 Alpha amylase, catalytic domain JC774_07065 PF02903 Alpha amylase, N-terminal ig-like domain JC774_07065 PF00395 S-layer homology domain JC774_07075 PF08280 M protein trans-acting positive regulator (MGA) HTH domain JC774_07075 PF00874 PRD domain JC774_07075 PF05043 Mga helix-turn-helix domain JC774_07100 PF01293 Phosphoenolpyruvate carboxykinase JC774_07105 PF00438 S-adenosylmethionine synthetase, N-terminal domain JC774_07105 PF02773 S-adenosylmethionine synthetase, C-terminal domain JC774_07105 PF02772 S-adenosylmethionine synthetase, central domain JC774_07110 PF13302 Acetyltransferase (GNAT) domain JC774_07125 PF00994 Probable molybdopterin binding domain JC774_07130 PF12804 MobA-like NTP transferase domain JC774_07135 PF00132 Bacterial transferase hexapeptide (six repeats) JC774_07140 PF12146 Serine aminopeptidase, S33 JC774_07145 PF10776 Protein of unknown function (DUF2600) JC774_07150 PF08279 HTH domain JC774_07150 PF13280 WYL domain JC774_07160 PF01177 Asp/Glu/Hydantoin racemase JC774_07170 PF00005 ABC transporter JC774_07175 PF06962 Putative rRNA methylase JC774_07180 PF16199 Radical_SAM C-terminal domain JC774_07180 PF04055 Radical SAM superfamily JC774_07185 PF10732 Protein of unknown function (DUF2524) JC774_07195 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JC774_07200 PF00005 ABC transporter JC774_07210 PF07690 Major Facilitator Superfamily JC774_07215 PF13603 Leucyl-tRNA synthetase, Domain 2 JC774_07215 PF08264 Anticodon-binding domain of tRNA JC774_07215 PF00133 tRNA synthetases class I (I, L, M and V) JC774_07215 PF09334 tRNA synthetases class I (M) JC774_07245 PF03323 Bacillus/Clostridium GerA spore germination protein JC774_07250 PF00561 alpha/beta hydrolase fold JC774_07260 PF00581 Rhodanese-like domain JC774_07275 PF02665 Nitrate reductase gamma subunit JC774_07280 PF02613 Nitrate reductase delta subunit JC774_07285 PF13247 4Fe-4S dicluster domain JC774_07285 PF14711 Respiratory nitrate reductase beta C-terminal JC774_07290 PF01568 Molydopterin dinucleotide binding domain JC774_07290 PF14710 Respiratory nitrate reductase alpha N-terminal JC774_07290 PF00384 Molybdopterin oxidoreductase JC774_07295 PF00325 Bacterial regulatory proteins, crp family JC774_07295 PF00027 Cyclic nucleotide-binding domain JC774_07300 PF04055 Radical SAM superfamily JC774_07300 PF06463 Molybdenum Cofactor Synthesis C JC774_07305 PF00899 ThiF family JC774_07310 PF01967 MoaC family JC774_07315 PF03453 MoeA N-terminal region (domain I and II) JC774_07315 PF03454 MoeA C-terminal region (domain IV) JC774_07315 PF00994 Probable molybdopterin binding domain JC774_07320 PF03205 Molybdopterin guanine dinucleotide synthesis protein B JC774_07325 PF02391 MoaE protein JC774_07335 PF07690 Major Facilitator Superfamily JC774_07340 PF06800 Sugar transport protein JC774_07345 PF02559 CarD-like/TRCF domain JC774_07355 PF10957 Sporulation protein Cse60 JC774_07400 PF00535 Glycosyl transferase family 2 JC774_07420 PF08327 Activator of Hsp90 ATPase homolog 1-like protein JC774_07425 PF01022 Bacterial regulatory protein, arsR family JC774_07430 PF07690 Major Facilitator Superfamily JC774_07440 PF14667 Polysaccharide biosynthesis C-terminal domain JC774_07440 PF01943 Polysaccharide biosynthesis protein JC774_07445 PF01479 S4 domain JC774_07445 PF00849 RNA pseudouridylate synthase JC774_07450 PF08220 DeoR-like helix-turn-helix domain JC774_07455 PF01546 Peptidase family M20/M25/M40 JC774_07460 PF02834 LigT like Phosphoesterase JC774_07465 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) JC774_07465 PF17999 Pullulanase N1-terminal domain JC774_07465 PF00128 Alpha amylase, catalytic domain JC774_07470 PF01636 Phosphotransferase enzyme family JC774_07475 PF14165 YtzH-like protein JC774_07480 PF02390 Putative methyltransferase JC774_07485 PF00753 Metallo-beta-lactamase superfamily JC774_07495 PF05343 M42 glutamyl aminopeptidase JC774_07510 PF12323 Helix-turn-helix domain JC774_07510 PF01385 Probable transposase JC774_07510 PF07282 Putative transposase DNA-binding domain JC774_07515 PF01931 Protein of unknown function DUF84 JC774_07520 PF00085 Thioredoxin JC774_07525 PF07285 Protein of unknown function (DUF1444) JC774_07530 PF01588 Putative tRNA binding domain JC774_07530 PF14794 Domain of unknown function (DUF4479) JC774_07540 PF01580 FtsK/SpoIIIE family JC774_07540 PF17854 FtsK alpha domain JC774_07540 PF09397 Ftsk gamma domain JC774_07550 PF08245 Mur ligase middle domain JC774_07550 PF02875 Mur ligase family, glutamate ligase domain JC774_07550 PF01225 Mur ligase family, catalytic domain JC774_07555 PF13302 Acetyltransferase (GNAT) domain JC774_07565 PF02073 Thermophilic metalloprotease (M29) JC774_07575 PF11009 Protein of unknown function (DUF2847) JC774_07580 PF01817 Chorismate mutase type II JC774_07580 PF00793 DAHP synthetase I family JC774_07585 PF00356 Bacterial regulatory proteins, lacI family JC774_07595 PF01741 Large-conductance mechanosensitive channel, MscL JC774_07600 PF00850 Histone deacetylase domain JC774_07605 PF00571 CBS domain JC774_07610 PF00583 Acetyltransferase (GNAT) family JC774_07615 PF00501 AMP-binding enzyme JC774_07615 PF13193 AMP-binding enzyme C-terminal domain JC774_07625 PF04542 Sigma-70 region 2 JC774_07625 PF08281 Sigma-70, region 4 JC774_07635 PF01479 S4 domain JC774_07635 PF00579 tRNA synthetases class I (W and Y) JC774_07655 PF04740 LXG domain of WXG superfamily JC774_07655 PF14436 Bacterial EndoU nuclease JC774_07660 PF00163 Ribosomal protein S4/S9 N-terminal domain JC774_07660 PF01479 S4 domain JC774_07665 PF01053 Cys/Met metabolism PLP-dependent enzyme JC774_07670 PF13185 GAF domain JC774_07675 PF00440 Bacterial regulatory proteins, tetR family JC774_07680 PF00892 EamA-like transporter family JC774_07685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JC774_07685 PF03466 LysR substrate binding domain JC774_07690 PF06160 Septation ring formation regulator, EzrA JC774_07695 PF00266 Aminotransferase class-V JC774_07700 PF02926 THUMP domain JC774_07700 PF02568 Thiamine biosynthesis protein (ThiI) JC774_07705 PF00269 Small, acid-soluble spore proteins, alpha/beta type JC774_07710 PF13193 AMP-binding enzyme C-terminal domain JC774_07710 PF00501 AMP-binding enzyme JC774_07715 PF07969 Amidohydrolase family JC774_07720 PF01513 ATP-NAD kinase JC774_07730 PF09579 Sporulation protein YtfJ (Spore_YtfJ) JC774_07735 PF08534 Redoxin JC774_07740 PF02384 N-6 DNA Methylase JC774_07745 PF00871 Acetokinase family JC774_07755 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JC774_07755 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JC774_07765 PF00764 Arginosuccinate synthase JC774_07770 PF14698 Argininosuccinate lyase C-terminal JC774_07770 PF00206 Lyase JC774_07790 PF00582 Universal stress protein family JC774_07800 PF01262 Alanine dehydrogenase/PNT, C-terminal domain JC774_07800 PF05222 Alanine dehydrogenase/PNT, N-terminal domain JC774_07820 PF01321 Creatinase/Prolidase N-terminal domain JC774_07820 PF00557 Metallopeptidase family M24 JC774_07830 PF00571 CBS domain JC774_07830 PF00392 Bacterial regulatory proteins, gntR family JC774_07830 PF07085 DRTGG domain JC774_07830 PF03061 Thioesterase superfamily JC774_07840 PF02272 DHHA1 domain JC774_07840 PF01368 DHH family JC774_07850 PF14034 Sporulation protein YtrH JC774_07855 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JC774_07855 PF01336 OB-fold nucleic acid binding domain JC774_07855 PF02811 PHP domain JC774_07855 PF14579 Helix-hairpin-helix motif JC774_07855 PF07733 Bacterial DNA polymerase III alpha NTPase domain JC774_07860 PF03949 Malic enzyme, NAD binding domain JC774_07860 PF00390 Malic enzyme, N-terminal domain JC774_07865 PF00392 Bacterial regulatory proteins, gntR family JC774_07870 PF17848 Acetyl-coA carboxylase zinc finger domain JC774_07870 PF01039 Carboxyl transferase domain JC774_07875 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit JC774_07880 PF00365 Phosphofructokinase JC774_07885 PF00224 Pyruvate kinase, barrel domain JC774_07885 PF00391 PEP-utilising enzyme, mobile domain JC774_07885 PF02887 Pyruvate kinase, alpha/beta domain JC774_07890 PF04186 FxsA cytoplasmic membrane protein JC774_07895 PF01594 AI-2E family transporter JC774_07900 PF04284 Protein of unknown function (DUF441) JC774_07905 PF00285 Citrate synthase, C-terminal domain JC774_07910 PF00180 Isocitrate/isopropylmalate dehydrogenase JC774_07915 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain JC774_07915 PF00056 lactate/malate dehydrogenase, NAD binding domain JC774_07930 PF00072 Response regulator receiver domain JC774_07930 PF00486 Transcriptional regulatory protein, C terminal JC774_07935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC774_07935 PF00512 His Kinase A (phospho-acceptor) domain JC774_07935 PF00989 PAS fold JC774_07935 PF16736 Single Cache-like JC774_07940 PF00476 DNA polymerase family A JC774_07940 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain JC774_07940 PF01367 5'-3' exonuclease, C-terminal SAM fold JC774_07945 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain JC774_07945 PF06827 Zinc finger found in FPG and IleRS JC774_07945 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain JC774_07950 PF02659 Putative manganese efflux pump JC774_07955 PF01121 Dephospho-CoA kinase JC774_07960 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain JC774_07960 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain JC774_07965 PF02675 S-adenosylmethionine decarboxylase JC774_07970 PF03477 ATP cone domain JC774_07975 PF07261 Replication initiation and membrane attachment JC774_07980 PF07319 Primosomal protein DnaI N-terminus JC774_07980 PF01695 IstB-like ATP binding protein JC774_07985 PF08812 YtxC-like family JC774_07990 PF03129 Anticodon binding domain JC774_07990 PF02824 TGS domain JC774_07990 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JC774_07990 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JC774_07995 PF05198 Translation initiation factor IF-3, N-terminal domain JC774_07995 PF00707 Translation initiation factor IF-3, C-terminal domain JC774_08000 PF01632 Ribosomal protein L35 JC774_08005 PF00453 Ribosomal protein L20 JC774_08015 PF05343 M42 glutamyl aminopeptidase JC774_08020 PF00440 Bacterial regulatory proteins, tetR family JC774_08020 PF16859 Tetracyclin repressor-like, C-terminal domain JC774_08030 PF07690 Major Facilitator Superfamily JC774_08040 PF01966 HD domain JC774_08045 PF14098 Small, acid-soluble spore protein I JC774_08050 PF00588 SpoU rRNA Methylase family JC774_08050 PF08032 RNA 2'-O ribose methyltransferase substrate binding JC774_08055 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain JC774_08055 PF01409 tRNA synthetases class II core domain (F) JC774_08060 PF01588 Putative tRNA binding domain JC774_08060 PF03483 B3/4 domain JC774_08060 PF03484 tRNA synthetase B5 domain JC774_08060 PF03147 Ferredoxin-fold anticodon binding domain JC774_08060 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain JC774_08065 PF01336 OB-fold nucleic acid binding domain JC774_08065 PF00152 tRNA synthetases class II (D, K and N) JC774_08075 PF11858 Domain of unknown function (DUF3378) JC774_08075 PF01351 Ribonuclease HII JC774_08080 PF05164 Cell division protein ZapA JC774_08085 PF02674 Colicin V production protein JC774_08090 PF02811 PHP domain JC774_08090 PF14791 DNA polymerase beta thumb JC774_08090 PF14716 Helix-hairpin-helix domain JC774_08095 PF01713 Smr domain JC774_08095 PF00488 MutS domain V JC774_08100 PF00849 RNA pseudouridylate synthase JC774_08100 PF01479 S4 domain JC774_08105 PF05525 Branched-chain amino acid transport protein JC774_08110 PF10672 S-adenosylmethionine-dependent methyltransferase JC774_08110 PF17785 PUA-like domain JC774_08115 PF09962 Uncharacterized conserved protein (DUF2196) JC774_08125 PF00486 Transcriptional regulatory protein, C terminal JC774_08125 PF00072 Response regulator receiver domain JC774_08130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC774_08130 PF00512 His Kinase A (phospho-acceptor) domain JC774_08135 PF00005 ABC transporter JC774_08155 PF05163 DinB family JC774_08165 PF13193 AMP-binding enzyme C-terminal domain JC774_08165 PF00501 AMP-binding enzyme JC774_08170 PF00440 Bacterial regulatory proteins, tetR family JC774_08170 PF08359 YsiA-like protein, C-terminal region JC774_08175 PF00378 Enoyl-CoA hydratase/isomerase JC774_08180 PF01012 Electron transfer flavoprotein domain JC774_08185 PF00766 Electron transfer flavoprotein FAD-binding domain JC774_08185 PF01012 Electron transfer flavoprotein domain JC774_08190 PF00085 Thioredoxin JC774_08200 PF02151 UvrB/uvrC motif JC774_08200 PF01541 GIY-YIG catalytic domain JC774_08200 PF08459 UvrC Helix-hairpin-helix N-terminal JC774_08205 PF10702 Protein of unknown function (DUF2507) JC774_08210 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit JC774_08215 PF02910 Fumarate reductase flavoprotein C-term JC774_08215 PF00890 FAD binding domain JC774_08220 PF13183 4Fe-4S dicluster domain JC774_08220 PF13085 2Fe-2S iron-sulfur cluster binding domain JC774_08230 PF02557 D-alanyl-D-alanine carboxypeptidase JC774_08235 PF01618 MotA/TolQ/ExbB proton channel family JC774_08240 PF00691 OmpA family JC774_08240 PF13677 Membrane MotB of proton-channel complex MotA/MotB JC774_08245 PF00005 ABC transporter JC774_08245 PF13732 Domain of unknown function (DUF4162) JC774_08255 PF02082 Transcriptional regulator JC774_08265 PF00196 Bacterial regulatory proteins, luxR family JC774_08270 PF01177 Asp/Glu/Hydantoin racemase JC774_08275 PF10646 Sporulation and spore germination JC774_08280 PF01138 3' exoribonuclease family, domain 1 JC774_08280 PF03725 3' exoribonuclease family, domain 2 JC774_08285 PF01725 Ham1 family JC774_08290 PF12850 Calcineurin-like phosphoesterase superfamily domain JC774_08310 PF00440 Bacterial regulatory proteins, tetR family JC774_08320 PF03176 MMPL family JC774_08325 PF13193 AMP-binding enzyme C-terminal domain JC774_08325 PF00550 Phosphopantetheine attachment site JC774_08325 PF00501 AMP-binding enzyme JC774_08325 PF00668 Condensation domain JC774_08335 PF00550 Phosphopantetheine attachment site JC774_08335 PF00668 Condensation domain JC774_08335 PF13193 AMP-binding enzyme C-terminal domain JC774_08335 PF00501 AMP-binding enzyme JC774_08335 PF00109 Beta-ketoacyl synthase, N-terminal domain JC774_08335 PF02801 Beta-ketoacyl synthase, C-terminal domain JC774_08335 PF16197 Ketoacyl-synthetase C-terminal extension JC774_08335 PF14765 Polyketide synthase dehydratase JC774_08335 PF08659 KR domain JC774_08340 PF00698 Acyl transferase domain JC774_08345 PF01648 4'-phosphopantetheinyl transferase superfamily JC774_08360 PF05697 Bacterial trigger factor protein (TF) JC774_08360 PF05698 Bacterial trigger factor protein (TF) C-terminus JC774_08360 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JC774_08365 PF10431 C-terminal, D2-small domain, of ClpB protein JC774_08365 PF07724 AAA domain (Cdc48 subfamily) JC774_08365 PF06689 ClpX C4-type zinc finger JC774_08370 PF00004 ATPase family associated with various cellular activities (AAA) JC774_08370 PF05362 Lon protease (S16) C-terminal proteolytic domain JC774_08375 PF02190 ATP-dependent protease La (LON) substrate-binding domain JC774_08375 PF05362 Lon protease (S16) C-terminal proteolytic domain JC774_08375 PF00004 ATPase family associated with various cellular activities (AAA) JC774_08380 PF01926 50S ribosome-binding GTPase JC774_08385 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain JC774_08385 PF01488 Shikimate / quinate 5-dehydrogenase JC774_08385 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain JC774_08390 PF01578 Cytochrome C assembly protein JC774_08395 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain JC774_08395 PF03900 Porphobilinogen deaminase, C-terminal domain JC774_08400 PF02602 Uroporphyrinogen-III synthase HemD JC774_08405 PF00490 Delta-aminolevulinic acid dehydratase JC774_08410 PF00202 Aminotransferase class-III JC774_08415 PF01476 LysM domain JC774_08415 PF01476 LysM domain JC774_08430 PF00133 tRNA synthetases class I (I, L, M and V) JC774_08430 PF10458 Valyl tRNA synthetase tRNA binding arm JC774_08430 PF08264 Anticodon-binding domain of tRNA JC774_08435 PF02875 Mur ligase family, glutamate ligase domain JC774_08435 PF08245 Mur ligase middle domain JC774_08445 PF02545 Maf-like protein JC774_08450 PF04002 RadC-like JAB domain JC774_08470 PF04085 rod shape-determining protein MreC JC774_08480 PF03775 Septum formation inhibitor MinC, C-terminal domain JC774_08485 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain JC774_08490 PF01551 Peptidase family M23 JC774_08495 PF02163 Peptidase family M50 JC774_08500 PF10150 Ribonuclease E/G family JC774_08500 PF00575 S1 RNA binding domain JC774_08505 PF00829 Ribosomal prokaryotic L21 protein JC774_08510 PF04327 Cysteine protease Prp JC774_08515 PF01016 Ribosomal L27 protein JC774_08520 PF14682 Sporulation initiation phospho-transferase B, C-terminal JC774_08520 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain JC774_08525 PF09269 Domain of unknown function (DUF1967) JC774_08525 PF01018 GTP1/OBG JC774_08525 PF01926 50S ribosome-binding GTPase JC774_08530 PF00072 Response regulator receiver domain JC774_08530 PF00486 Transcriptional regulatory protein, C terminal JC774_08535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC774_08540 PF00005 ABC transporter JC774_08545 PF02687 FtsX-like permease family JC774_08550 PF02687 FtsX-like permease family JC774_08555 PF00800 Prephenate dehydratase JC774_08555 PF01842 ACT domain JC774_08560 PF03475 3-alpha domain JC774_08560 PF03473 MOSC domain JC774_08565 PF02829 3H domain JC774_08565 PF08279 HTH domain JC774_08570 PF00266 Aminotransferase class-V JC774_08575 PF00890 FAD binding domain JC774_08575 PF02910 Fumarate reductase flavoprotein C-term JC774_08580 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain JC774_08580 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain JC774_08585 PF02445 Quinolinate synthetase A protein JC774_08590 PF01476 LysM domain JC774_08605 PF01497 Periplasmic binding protein JC774_08610 PF01330 RuvA N terminal domain JC774_08610 PF07499 RuvA, C-terminal domain JC774_08615 PF05496 Holliday junction DNA helicase RuvB P-loop domain JC774_08615 PF05491 RuvB C-terminal winged helix domain JC774_08615 PF17864 RuvB AAA lid domain JC774_08620 PF11146 Protein of unknown function (DUF2905) JC774_08625 PF02547 Queuosine biosynthesis protein JC774_08630 PF01702 Queuine tRNA-ribosyltransferase JC774_08635 PF02699 Preprotein translocase subunit JC774_08655 PF14667 Polysaccharide biosynthesis C-terminal domain JC774_08655 PF01943 Polysaccharide biosynthesis protein JC774_08660 PF13797 Post-transcriptional regulator JC774_08665 PF07549 SecD/SecF GG Motif JC774_08665 PF02355 Protein export membrane protein JC774_08670 PF01545 Cation efflux family JC774_08670 PF16916 Dimerisation domain of Zinc Transporter JC774_08675 PF01368 DHH family JC774_08675 PF02272 DHHA1 domain JC774_08675 PF10141 Single-strand DNA-specific exonuclease, C terminal domain JC774_08675 PF17768 RecJ OB domain JC774_08680 PF00156 Phosphoribosyl transferase domain JC774_08685 PF02824 TGS domain JC774_08685 PF04607 Region found in RelA / SpoT proteins JC774_08685 PF13291 ACT domain JC774_08690 PF02580 D-Tyr-tRNA(Tyr) deacylase JC774_08710 PF13393 Histidyl-tRNA synthetase JC774_08710 PF03129 Anticodon binding domain JC774_08715 PF01336 OB-fold nucleic acid binding domain JC774_08715 PF00152 tRNA synthetases class II (D, K and N) JC774_08715 PF02938 GAD domain JC774_08720 PF00899 ThiF family JC774_08730 PF17853 GGDEF-like domain JC774_08730 PF12833 Helix-turn-helix domain JC774_08750 PF12002 MgsA AAA+ ATPase C terminal JC774_08750 PF05496 Holliday junction DNA helicase RuvB P-loop domain JC774_08750 PF16193 AAA C-terminal domain JC774_08755 PF02082 Transcriptional regulator JC774_08760 PF00266 Aminotransferase class-V JC774_08775 PF14490 Helix-hairpin-helix containing domain JC774_08775 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain JC774_08775 PF13538 UvrD-like helicase C-terminal domain JC774_08795 PF01594 AI-2E family transporter JC774_08800 PF02272 DHHA1 domain JC774_08800 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JC774_08800 PF01411 tRNA synthetases class II (A) JC774_08805 PF06135 IreB regulatory phosphoprotein JC774_08810 PF03652 Holliday junction resolvase JC774_08815 PF06949 Protein of unknown function (DUF1292) JC774_08820 PF02618 YceG-like family JC774_08825 PF01596 O-methyltransferase JC774_08830 PF01136 Peptidase family U32 JC774_08835 PF01136 Peptidase family U32 JC774_08835 PF16325 Peptidase family U32 C-terminal domain JC774_08840 PF00485 Phosphoribulokinase / Uridine kinase family JC774_08845 PF01272 Transcription elongation factor, GreA/GreB, C-term JC774_08845 PF03449 Transcription elongation factor, N-terminal JC774_08855 PF03717 Penicillin-binding Protein dimerisation domain JC774_08855 PF00905 Penicillin binding protein transpeptidase domain JC774_08870 PF10750 Protein of unknown function (DUF2536) JC774_08875 PF08241 Methyltransferase domain JC774_08880 PF01048 Phosphorylase superfamily JC774_08885 PF00291 Pyridoxal-phosphate dependent enzyme JC774_08890 PF01053 Cys/Met metabolism PLP-dependent enzyme JC774_08900 PF00356 Bacterial regulatory proteins, lacI family JC774_08915 PF07681 DoxX JC774_08920 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JC774_08925 PF01329 Pterin 4 alpha carbinolamine dehydratase JC774_08930 PF00351 Biopterin-dependent aromatic amino acid hydroxylase JC774_08955 PF00561 alpha/beta hydrolase fold JC774_08955 PF08386 TAP-like protein JC774_08960 PF00583 Acetyltransferase (GNAT) family JC774_08965 PF00245 Alkaline phosphatase JC774_08970 PF04607 Region found in RelA / SpoT proteins JC774_08975 PF00471 Ribosomal protein L33 JC774_08985 PF04542 Sigma-70 region 2 JC774_08985 PF04545 Sigma-70, region 4 JC774_08990 PF02666 Phosphatidylserine decarboxylase JC774_09005 PF01926 50S ribosome-binding GTPase JC774_09010 PF18317 Shikimate 5'-dehydrogenase C-terminal domain JC774_09010 PF08501 Shikimate dehydrogenase substrate binding domain JC774_09010 PF01488 Shikimate / quinate 5-dehydrogenase JC774_09015 PF01985 CRS1 / YhbY (CRM) domain JC774_09020 PF01467 Cytidylyltransferase-like JC774_09025 PF01966 HD domain JC774_09035 PF13649 Methyltransferase domain JC774_09040 PF14748 Pyrroline-5-carboxylate reductase dimerisation JC774_09040 PF03807 NADP oxidoreductase coenzyme F420-dependent JC774_09045 PF10531 SLBB domain JC774_09050 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JC774_09055 PF00753 Metallo-beta-lactamase superfamily JC774_09055 PF13567 Domain of unknown function (DUF4131) JC774_09055 PF03772 Competence protein JC774_09060 PF14141 YqzM-like protein JC774_09065 PF06144 DNA polymerase III, delta subunit JC774_09070 PF01649 Ribosomal protein S20 JC774_09075 PF03418 Germination protease JC774_09080 PF12438 Protein of unknown function (DUF3679) JC774_09085 PF00009 Elongation factor Tu GTP binding domain JC774_09085 PF03144 Elongation factor Tu domain 2 JC774_09085 PF06421 GTP-binding protein LepA C-terminus JC774_09085 PF00679 Elongation factor G C-terminus JC774_09090 PF01965 DJ-1/PfpI family JC774_09095 PF01638 HxlR-like helix-turn-helix JC774_09100 PF06969 HemN C-terminal domain JC774_09100 PF04055 Radical SAM superfamily JC774_09105 PF01628 HrcA protein C terminal domain JC774_09110 PF01025 GrpE JC774_09115 PF00012 Hsp70 protein JC774_09120 PF00226 DnaJ domain JC774_09120 PF01556 DnaJ C terminal domain JC774_09120 PF00684 DnaJ central domain JC774_09130 PF04452 RNA methyltransferase JC774_09135 PF04055 Radical SAM superfamily JC774_09135 PF01938 TRAM domain JC774_09135 PF00919 Uncharacterized protein family UPF0004 JC774_09140 PF01165 Ribosomal protein S21 JC774_09145 PF09424 Yqey-like protein JC774_09150 PF07873 YabP family JC774_09155 PF06898 Putative stage IV sporulation protein YqfD JC774_09160 PF02562 PhoH-like protein JC774_09165 PF07698 7TM receptor with intracellular HD hydrolase JC774_09165 PF07697 7TM-HD extracellular JC774_09165 PF01966 HD domain JC774_09170 PF02130 Uncharacterized protein family UPF0054 JC774_09175 PF01219 Prokaryotic diacylglycerol kinase JC774_09185 PF07650 KH domain JC774_09185 PF01926 50S ribosome-binding GTPase JC774_09195 PF11967 Recombination protein O N terminal JC774_09195 PF02565 Recombination protein O C terminal JC774_09200 PF00571 CBS domain JC774_09200 PF08279 HTH domain JC774_09205 PF03618 Kinase/pyrophosphorylase JC774_09210 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 JC774_09215 PF10410 DnaB-helicase binding domain of primase JC774_09215 PF08275 DNA primase catalytic core, N-terminal domain JC774_09215 PF01807 CHC2 zinc finger JC774_09220 PF04545 Sigma-70, region 4 JC774_09220 PF04539 Sigma-70 region 3 JC774_09220 PF03979 Sigma-70 factor, region 1.1 JC774_09220 PF00140 Sigma-70 factor, region 1.2 JC774_09220 PF04542 Sigma-70 region 2 JC774_09225 PF13442 Cytochrome C oxidase, cbb3-type, subunit III JC774_09230 PF04816 tRNA (adenine(22)-N(1))-methyltransferase JC774_09235 PF01784 NIF3 (NGG1p interacting factor 3) JC774_09240 PF02401 LytB protein JC774_09250 PF00270 DEAD/DEAH box helicase JC774_09250 PF00271 Helicase conserved C-terminal domain JC774_09255 PF01261 Xylose isomerase-like TIM barrel JC774_09265 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JC774_09265 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JC774_09270 PF00005 ABC transporter JC774_09275 PF00950 ABC 3 transport family JC774_09280 PF01475 Ferric uptake regulator family JC774_09285 PF04551 GcpE protein JC774_09305 PF02777 Iron/manganese superoxide dismutases, C-terminal domain JC774_09305 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain JC774_09310 PF07690 Major Facilitator Superfamily JC774_09315 PF03717 Penicillin-binding Protein dimerisation domain JC774_09315 PF00905 Penicillin binding protein transpeptidase domain JC774_09320 PF12849 PBP superfamily domain JC774_09325 PF00528 Binding-protein-dependent transport system inner membrane component JC774_09330 PF00528 Binding-protein-dependent transport system inner membrane component JC774_09335 PF00005 ABC transporter JC774_09340 PF01895 PhoU domain JC774_09345 PF00483 Nucleotidyl transferase JC774_09350 PF00471 Ribosomal protein L33 JC774_09355 PF01812 5-formyltetrahydrofolate cyclo-ligase family JC774_09360 PF06014 Bacterial protein of unknown function (DUF910) JC774_09365 PF00480 ROK family JC774_09370 PF10958 Protein of unknown function (DUF2759) JC774_09375 PF00753 Metallo-beta-lactamase superfamily JC774_09385 PF01022 Bacterial regulatory protein, arsR family JC774_09390 PF01053 Cys/Met metabolism PLP-dependent enzyme JC774_09395 PF01053 Cys/Met metabolism PLP-dependent enzyme JC774_09400 PF02219 Methylenetetrahydrofolate reductase JC774_09400 PF02574 Homocysteine S-methyltransferase JC774_09405 PF00809 Pterin binding enzyme JC774_09405 PF02574 Homocysteine S-methyltransferase JC774_09405 PF02607 B12 binding domain JC774_09405 PF02310 B12 binding domain JC774_09405 PF02965 Vitamin B12 dependent methionine synthase, activation domain JC774_09420 PF01966 HD domain JC774_09445 PF00375 Sodium:dicarboxylate symporter family JC774_09450 PF11117 Protein of unknown function (DUF2626) JC774_09460 PF00437 Type II/IV secretion system protein JC774_09465 PF00482 Type II secretion system (T2SS), protein F JC774_09490 PF01202 Shikimate kinase JC774_09495 PF14038 YqzE-like protein JC774_09515 PF11079 Bacterial protein YqhG of unknown function JC774_09520 PF00271 Helicase conserved C-terminal domain JC774_09520 PF00176 SNF2 family N-terminal domain JC774_09525 PF01571 Aminomethyltransferase folate-binding domain JC774_09525 PF08669 Glycine cleavage T-protein C-terminal barrel domain JC774_09530 PF02347 Glycine cleavage system P-protein JC774_09535 PF02347 Glycine cleavage system P-protein JC774_09550 PF00392 Bacterial regulatory proteins, gntR family JC774_09555 PF00005 ABC transporter JC774_09575 PF00893 Small Multidrug Resistance protein JC774_09580 PF00893 Small Multidrug Resistance protein JC774_09590 PF00356 Bacterial regulatory proteins, lacI family JC774_09590 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family JC774_09600 PF00581 Rhodanese-like domain JC774_09605 PF03099 Biotin/lipoate A/B protein ligase family JC774_09615 PF02742 Iron dependent repressor, metal binding and dimerisation domain JC774_09615 PF01325 Iron dependent repressor, N-terminal DNA binding domain JC774_09625 PF07136 Protein of unknown function (DUF1385) JC774_09630 PF11085 Conserved membrane protein YqhR JC774_09635 PF01220 Dehydroquinase class II JC774_09640 PF01321 Creatinase/Prolidase N-terminal domain JC774_09640 PF00557 Metallopeptidase family M24 JC774_09645 PF01132 Elongation factor P (EF-P) OB domain JC774_09645 PF09285 Elongation factor P, C-terminal JC774_09645 PF08207 Elongation factor P (EF-P) KOW-like domain JC774_09670 PF09548 Stage III sporulation protein AB (spore_III_AB) JC774_09675 PF06686 Stage III sporulation protein AC/AD protein family JC774_09680 PF06686 Stage III sporulation protein AC/AD protein family JC774_09685 PF09546 Stage III sporulation protein AE (spore_III_AE) JC774_09690 PF09581 Stage III sporulation protein AF (Spore_III_AF) JC774_09700 PF12685 SpoIIIAH-like protein JC774_09710 PF00364 Biotin-requiring enzyme JC774_09715 PF02785 Biotin carboxylase C-terminal domain JC774_09715 PF00289 Biotin carboxylase, N-terminal domain JC774_09715 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JC774_09720 PF03780 Asp23 family, cell envelope-related function JC774_09725 PF01029 NusB family JC774_09730 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain JC774_09730 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain JC774_09735 PF02601 Exonuclease VII, large subunit JC774_09735 PF13742 OB-fold nucleic acid binding domain JC774_09740 PF02609 Exonuclease VII small subunit JC774_09745 PF00348 Polyprenyl synthetase JC774_09750 PF13292 1-deoxy-D-xylulose-5-phosphate synthase JC774_09750 PF02779 Transketolase, pyrimidine binding domain JC774_09750 PF02780 Transketolase, C-terminal domain JC774_09755 PF01728 FtsJ-like methyltransferase JC774_09755 PF01479 S4 domain JC774_09760 PF01316 Arginine repressor, DNA binding domain JC774_09760 PF02863 Arginine repressor, C-terminal domain JC774_09765 PF13476 AAA domain JC774_09770 PF05580 SpoIVB peptidase S55 JC774_09770 PF17820 PDZ domain JC774_09780 PF00072 Response regulator receiver domain JC774_09780 PF08769 Sporulation initiation factor Spo0A C terminal JC774_09805 PF00005 ABC transporter JC774_09820 PF14174 YycC-like protein JC774_09825 PF03009 Glycerophosphoryl diester phosphodiesterase family JC774_09835 PF11118 Protein of unknown function (DUF2627) JC774_09840 PF00989 PAS fold JC774_09840 PF00158 Sigma-54 interaction domain JC774_09840 PF02954 Bacterial regulatory protein, Fis family JC774_09845 PF01515 Phosphate acetyl/butaryl transferase JC774_09850 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase JC774_09850 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain JC774_09855 PF00871 Acetokinase family JC774_09860 PF07992 Pyridine nucleotide-disulphide oxidoreductase JC774_09860 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JC774_09865 PF00676 Dehydrogenase E1 component JC774_09870 PF02780 Transketolase, C-terminal domain JC774_09870 PF02779 Transketolase, pyrimidine binding domain JC774_09875 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JC774_09875 PF00364 Biotin-requiring enzyme JC774_09875 PF02817 e3 binding domain JC774_09880 PF01098 Cell cycle protein JC774_09885 PF00293 NUDIX domain JC774_09885 PF09297 NADH pyrophosphatase zinc ribbon domain JC774_09890 PF11208 Protein of unknown function (DUF2992) JC774_09895 PF06491 Disulphide isomerase JC774_09900 PF00497 Bacterial extracellular solute-binding proteins, family 3 JC774_09905 PF00528 Binding-protein-dependent transport system inner membrane component JC774_09910 PF00005 ABC transporter JC774_09915 PF06081 Aromatic acid exporter family member 1 JC774_09915 PF11728 Putative aromatic acid exporter C-terminal domain JC774_09920 PF03734 L,D-transpeptidase catalytic domain JC774_09935 PF13302 Acetyltransferase (GNAT) domain JC774_09940 PF07687 Peptidase dimerisation domain JC774_09940 PF01546 Peptidase family M20/M25/M40 JC774_09945 PF00817 impB/mucB/samB family JC774_09945 PF11799 impB/mucB/samB family C-terminal domain JC774_09945 PF11798 IMS family HHH motif JC774_09950 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) JC774_09960 PF00753 Metallo-beta-lactamase superfamily JC774_09960 PF12706 Beta-lactamase superfamily domain JC774_09970 PF03315 Serine dehydratase beta chain JC774_09970 PF01842 ACT domain JC774_09975 PF03313 Serine dehydratase alpha chain JC774_09980 PF03807 NADP oxidoreductase coenzyme F420-dependent JC774_09980 PF14748 Pyrroline-5-carboxylate reductase dimerisation JC774_09985 PF00753 Metallo-beta-lactamase superfamily JC774_09990 PF00106 short chain dehydrogenase JC774_10000 PF01118 Semialdehyde dehydrogenase, NAD binding domain JC774_10000 PF02774 Semialdehyde dehydrogenase, dimerisation domain JC774_10005 PF01960 ArgJ family JC774_10010 PF00696 Amino acid kinase family JC774_10015 PF00202 Aminotransferase class-III JC774_10020 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JC774_10020 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JC774_10040 PF02872 5'-nucleotidase, C-terminal domain JC774_10040 PF00149 Calcineurin-like phosphoesterase JC774_10045 PF03553 Na+/H+ antiporter family JC774_10055 PF00202 Aminotransferase class-III JC774_10065 PF00155 Aminotransferase class I and II JC774_10070 PF00561 alpha/beta hydrolase fold JC774_10075 PF13847 Methyltransferase domain JC774_10080 PF06968 Biotin and Thiamin Synthesis associated domain JC774_10080 PF04055 Radical SAM superfamily JC774_10090 PF00885 6,7-dimethyl-8-ribityllumazine synthase JC774_10095 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase JC774_10095 PF00925 GTP cyclohydrolase II JC774_10100 PF00677 Lumazine binding domain JC774_10105 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JC774_10105 PF01872 RibD C-terminal domain JC774_10115 PF10827 Protein of unknown function (DUF2552) JC774_10120 PF12146 Serine aminopeptidase, S33 JC774_10125 PF00583 Acetyltransferase (GNAT) family JC774_10130 PF00356 Bacterial regulatory proteins, lacI family JC774_10135 PF03553 Na+/H+ antiporter family JC774_10135 PF13726 Na+-H+ antiporter family JC774_10140 PF12146 Serine aminopeptidase, S33 JC774_10150 PF02872 5'-nucleotidase, C-terminal domain JC774_10150 PF00746 LPXTG cell wall anchor motif JC774_10150 PF00149 Calcineurin-like phosphoesterase JC774_10150 PF00565 Staphylococcal nuclease homologue JC774_10160 PF13673 Acetyltransferase (GNAT) domain JC774_10160 PF04229 GrpB protein JC774_10165 PF00248 Aldo/keto reductase family JC774_10170 PF00248 Aldo/keto reductase family JC774_10175 PF13072 Mother cell inhibitor of FtsZ JC774_10180 PF00293 NUDIX domain JC774_10190 PF01944 Stage II sporulation protein M JC774_10195 PF01475 Ferric uptake regulator family JC774_10200 PF14004 Protein of unknown function (DUF4227) JC774_10205 PF02899 Phage integrase, N-terminal SAM-like domain JC774_10205 PF00589 Phage integrase family JC774_10210 PF13115 YtkA-like JC774_10215 PF01676 Metalloenzyme superfamily JC774_10220 PF01048 Phosphorylase superfamily JC774_10225 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain JC774_10225 PF02885 Glycosyl transferase family, helical bundle domain JC774_10225 PF00591 Glycosyl transferase family, a/b domain JC774_10230 PF01544 CorA-like Mg2+ transporter protein JC774_10235 PF00860 Permease family JC774_10245 PF01047 MarR family JC774_10265 PF00005 ABC transporter JC774_10270 PF00392 Bacterial regulatory proteins, gntR family JC774_10275 PF00768 D-alanyl-D-alanine carboxypeptidase JC774_10275 PF07943 Penicillin-binding protein 5, C-terminal domain JC774_10280 PF01740 STAS domain JC774_10285 PF13581 Histidine kinase-like ATPase domain JC774_10290 PF04542 Sigma-70 region 2 JC774_10290 PF04545 Sigma-70, region 4 JC774_10290 PF04539 Sigma-70 region 3 JC774_10295 PF00209 Sodium:neurotransmitter symporter family JC774_10305 PF12164 Stage V sporulation protein AA JC774_10310 PF13782 Stage V sporulation protein AB JC774_10315 PF03862 SpoVAC/SpoVAEB sporulation membrane protein JC774_10320 PF07451 Stage V sporulation protein AD (SpoVAD) JC774_10325 PF03862 SpoVAC/SpoVAEB sporulation membrane protein JC774_10330 PF14097 Stage V sporulation protein AE1 JC774_10335 PF03323 Bacillus/Clostridium GerA spore germination protein JC774_10345 PF06207 Protein of unknown function (DUF1002) JC774_10350 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD JC774_10355 PF00583 Acetyltransferase (GNAT) family JC774_10360 PF03745 Domain of unknown function (DUF309) JC774_10370 PF02616 Segregation and condensation protein ScpA JC774_10375 PF04079 Segregation and condensation complex subunit ScpB JC774_10385 PF01979 Amidohydrolase family JC774_10390 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase JC774_10395 PF00392 Bacterial regulatory proteins, gntR family JC774_10395 PF07702 UTRA domain JC774_10405 PF03123 CAT RNA binding domain JC774_10405 PF00874 PRD domain JC774_10410 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JC774_10410 PF00367 phosphotransferase system, EIIB JC774_10410 PF02378 Phosphotransferase system, EIIC JC774_10415 PF00381 PTS HPr component phosphorylation site JC774_10420 PF05524 PEP-utilising enzyme, N-terminal JC774_10420 PF00391 PEP-utilising enzyme, mobile domain JC774_10420 PF02896 PEP-utilising enzyme, TIM barrel domain JC774_10435 PF00881 Nitroreductase family JC774_10440 PF00990 Diguanylate cyclase, GGDEF domain JC774_10440 PF08448 PAS fold JC774_10445 PF00144 Beta-lactamase JC774_10450 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase JC774_10450 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JC774_10465 PF03079 ARD/ARD' family JC774_10470 PF00596 Class II Aldolase and Adducin N-terminal domain JC774_10480 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain JC774_10480 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain JC774_10485 PF00155 Aminotransferase class I and II JC774_10490 PF00795 Carbon-nitrogen hydrolase JC774_10495 PF01636 Phosphotransferase enzyme family JC774_10500 PF01008 Initiation factor 2 subunit family JC774_10515 PF03551 Transcriptional regulator PadR-like family JC774_10540 PF00108 Thiolase, N-terminal domain JC774_10540 PF02803 Thiolase, C-terminal domain JC774_10555 PF06271 RDD family JC774_10565 PF00128 Alpha amylase, catalytic domain JC774_10565 PF02903 Alpha amylase, N-terminal ig-like domain JC774_10565 PF16657 Maltogenic Amylase, C-terminal domain JC774_10570 PF00356 Bacterial regulatory proteins, lacI family JC774_10570 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family JC774_10575 PF00155 Aminotransferase class I and II JC774_10585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC774_10585 PF00512 His Kinase A (phospho-acceptor) domain JC774_10595 PF14040 Deoxyribonuclease NucA/NucB JC774_10605 PF08267 Cobalamin-independent synthase, N-terminal domain JC774_10605 PF01717 Cobalamin-independent synthase, Catalytic domain JC774_10610 PF07690 Major Facilitator Superfamily JC774_10630 PF01522 Polysaccharide deacetylase JC774_10640 PF14177 YkyB-like protein JC774_10650 PF13090 Polyphosphate kinase C-terminal domain 2 JC774_10650 PF17941 Polyphosphate kinase C-terminal domain 1 JC774_10650 PF13089 Polyphosphate kinase N-terminal domain JC774_10650 PF02503 Polyphosphate kinase middle domain JC774_10660 PF10518 TAT (twin-arginine translocation) pathway signal sequence JC774_10660 PF00149 Calcineurin-like phosphoesterase JC774_10670 PF10388 EAL-domain associated signalling protein domain JC774_10670 PF00563 EAL domain JC774_10685 PF08796 Protein of unknown function (DUF1797) JC774_10695 PF04308 Ribonuclease H-like JC774_10710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JC774_10710 PF03466 LysR substrate binding domain JC774_10715 PF00132 Bacterial transferase hexapeptide (six repeats) JC774_10715 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal JC774_10715 PF14602 Hexapeptide repeat of succinyl-transferase JC774_10720 PF07687 Peptidase dimerisation domain JC774_10720 PF01546 Peptidase family M20/M25/M40 JC774_10730 PF02254 TrkA-N domain JC774_10730 PF02080 TrkA-C domain JC774_10735 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain JC774_10735 PF00753 Metallo-beta-lactamase superfamily JC774_10735 PF17770 Ribonuclease J C-terminal domain JC774_10740 PF07288 Protein of unknown function (DUF1447) JC774_10750 PF01327 Polypeptide deformylase JC774_10760 PF00676 Dehydrogenase E1 component JC774_10765 PF02779 Transketolase, pyrimidine binding domain JC774_10765 PF02780 Transketolase, C-terminal domain JC774_10770 PF00364 Biotin-requiring enzyme JC774_10770 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JC774_10770 PF02817 e3 binding domain JC774_10775 PF07992 Pyridine nucleotide-disulphide oxidoreductase JC774_10775 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JC774_10795 PF13790 SR1 protein JC774_10805 PF01276 Orn/Lys/Arg decarboxylase, major domain JC774_10805 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain JC774_10810 PF05256 Uncharacterised protein family (UPF0223) JC774_10815 PF06335 Protein of unknown function (DUF1054) JC774_10825 PF00459 Inositol monophosphatase family JC774_10835 PF03144 Elongation factor Tu domain 2 JC774_10835 PF00679 Elongation factor G C-terminus JC774_10835 PF14492 Elongation Factor G, domain II JC774_10835 PF00009 Elongation factor Tu GTP binding domain JC774_10840 PF14036 YlaH-like protein JC774_10850 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) JC774_10860 PF02562 PhoH-like protein JC774_10860 PF13638 PIN domain JC774_10870 PF07408 Protein of unknown function (DUF1507) JC774_10875 PF01098 Cell cycle protein JC774_10880 PF02436 Conserved carboxylase domain JC774_10880 PF00682 HMGL-like JC774_10880 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JC774_10880 PF00364 Biotin-requiring enzyme JC774_10880 PF00289 Biotin carboxylase, N-terminal domain JC774_10880 PF02785 Biotin carboxylase C-terminal domain JC774_10885 PF02628 Cytochrome oxidase assembly protein JC774_10890 PF01040 UbiA prenyltransferase family JC774_10895 PF00116 Cytochrome C oxidase subunit II, periplasmic domain JC774_10895 PF02790 Cytochrome C oxidase subunit II, transmembrane domain JC774_10895 PF00034 Cytochrome c JC774_10900 PF00115 Cytochrome C and Quinol oxidase polypeptide I JC774_10905 PF00510 Cytochrome c oxidase subunit III JC774_10910 PF03626 Prokaryotic Cytochrome C oxidase subunit IV JC774_10915 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) JC774_10920 PF08868 YugN-like family JC774_10925 PF00188 Cysteine-rich secretory protein family JC774_10925 PF14504 CAP-associated N-terminal JC774_10930 PF14071 Putative coat protein JC774_10935 PF14003 YlbE-like protein JC774_10940 PF00300 Histidine phosphatase superfamily (branch 1) JC774_10945 PF06133 Control of competence regulator ComK, YlbF/YmcA JC774_10950 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) JC774_10965 PF01467 Cytidylyltransferase-like JC774_10970 PF07670 Nucleoside recognition JC774_10975 PF01734 Patatin-like phospholipase JC774_10980 PF05362 Lon protease (S16) C-terminal proteolytic domain JC774_10980 PF13180 PDZ domain JC774_10985 PF05636 HIGH Nucleotidyl Transferase JC774_10990 PF14659 Phage integrase, N-terminal SAM-like domain JC774_10990 PF00589 Phage integrase family JC774_10995 PF01381 Helix-turn-helix JC774_11010 PF01381 Helix-turn-helix JC774_11050 PF09588 YqaJ-like viral recombinase domain JC774_11060 PF03837 RecT family JC774_11090 PF18277 AbrB C-terminal domain JC774_11090 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin JC774_11125 PF04545 Sigma-70, region 4 JC774_11125 PF04542 Sigma-70 region 2 JC774_11125 PF04539 Sigma-70 region 3 JC774_11175 PF03354 Phage Terminase JC774_11250 PF01510 N-acetylmuramoyl-L-alanine amidase JC774_11250 PF13457 GW (Gly-Tryp) dipeptide domain JC774_11285 PF02620 Large ribosomal RNA subunit accumulation protein YceD JC774_11290 PF01783 Ribosomal L32p protein family JC774_11300 PF00583 Acetyltransferase (GNAT) family JC774_11305 PF02558 Ketopantoate reductase PanE/ApbA JC774_11305 PF08546 Ketopantoate reductase PanE/ApbA C terminal JC774_11310 PF10079 Bacillithiol biosynthesis BshC JC774_11315 PF01795 MraW methylase family JC774_11320 PF04977 Septum formation initiator JC774_11325 PF00905 Penicillin binding protein transpeptidase domain JC774_11325 PF03717 Penicillin-binding Protein dimerisation domain JC774_11325 PF03793 PASTA domain JC774_11330 PF03793 PASTA domain JC774_11330 PF00905 Penicillin binding protein transpeptidase domain JC774_11330 PF03717 Penicillin-binding Protein dimerisation domain JC774_11335 PF02875 Mur ligase family, glutamate ligase domain JC774_11335 PF08245 Mur ligase middle domain JC774_11335 PF01225 Mur ligase family, catalytic domain JC774_11340 PF00953 Glycosyl transferase family 4 JC774_11340 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 JC774_11345 PF02875 Mur ligase family, glutamate ligase domain JC774_11345 PF08245 Mur ligase middle domain JC774_11350 PF01098 Cell cycle protein JC774_11355 PF04101 Glycosyltransferase family 28 C-terminal domain JC774_11355 PF03033 Glycosyltransferase family 28 N-terminal domain JC774_11360 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain JC774_11360 PF01565 FAD binding domain JC774_11365 PF03799 Cell division protein FtsQ JC774_11365 PF08478 POTRA domain, FtsQ-type JC774_11370 PF02491 SHS2 domain inserted in FTSA JC774_11375 PF12327 FtsZ family, C-terminal domain JC774_11375 PF00091 Tubulin/FtsZ family, GTPase domain JC774_11380 PF03419 Sporulation factor SpoIIGA JC774_11385 PF04542 Sigma-70 region 2 JC774_11385 PF04545 Sigma-70, region 4 JC774_11390 PF04545 Sigma-70, region 4 JC774_11390 PF04542 Sigma-70 region 2 JC774_11390 PF04539 Sigma-70 region 3 JC774_11395 PF05239 PRC-barrel domain JC774_11400 PF02578 Multi-copper polyphenol oxidoreductase laccase JC774_11405 PF01168 Alanine racemase, N-terminal domain JC774_11410 PF04472 Cell division protein SepF JC774_11415 PF02325 YGGT family JC774_11420 PF01479 S4 domain JC774_11420 PF17774 Putative RNA-binding domain in YlmH JC774_11425 PF05103 DivIVA protein JC774_11430 PF08264 Anticodon-binding domain of tRNA JC774_11430 PF00133 tRNA synthetases class I (I, L, M and V) JC774_11430 PF06827 Zinc finger found in FPG and IleRS JC774_11440 PF01252 Signal peptidase (SPase) II JC774_11445 PF01479 S4 domain JC774_11445 PF00849 RNA pseudouridylate synthase JC774_11450 PF00156 Phosphoribosyl transferase domain JC774_11455 PF00860 Permease family JC774_11460 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JC774_11460 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JC774_11465 PF01979 Amidohydrolase family JC774_11470 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain JC774_11470 PF00117 Glutamine amidotransferase class-I JC774_11475 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JC774_11475 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain JC774_11475 PF02142 MGS-like domain JC774_11480 PF00970 Oxidoreductase FAD-binding domain JC774_11480 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B JC774_11485 PF01180 Dihydroorotate dehydrogenase JC774_11490 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family JC774_11495 PF00156 Phosphoribosyl transferase domain JC774_11515 PF05670 NFACT protein RNA binding domain JC774_11520 PF00689 Cation transporting ATPase, C-terminus JC774_11520 PF00690 Cation transporter/ATPase, N-terminus JC774_11525 PF03755 YicC-like family, N-terminal region JC774_11525 PF08340 Domain of unknown function (DUF1732) JC774_11530 PF04025 Domain of unknown function (DUF370) JC774_11535 PF00625 Guanylate kinase JC774_11540 PF01192 RNA polymerase Rpb6 JC774_11545 PF02441 Flavoprotein JC774_11545 PF04127 DNA / pantothenate metabolism flavoprotein JC774_11550 PF04851 Type III restriction enzyme, res subunit JC774_11550 PF18319 PriA DNA helicase Cys-rich region (CRR) domain JC774_11550 PF18074 Primosomal protein N C-terminal domain JC774_11550 PF00271 Helicase conserved C-terminal domain JC774_11550 PF17764 3′ DNA-binding domain (3′BD) JC774_11555 PF01327 Polypeptide deformylase JC774_11560 PF00551 Formyl transferase JC774_11560 PF02911 Formyl transferase, C-terminal domain JC774_11565 PF01189 16S rRNA methyltransferase RsmB/F JC774_11565 PF01029 NusB family JC774_11570 PF04055 Radical SAM superfamily JC774_11580 PF03793 PASTA domain JC774_11580 PF00069 Protein kinase domain JC774_11585 PF03193 RsgA GTPase JC774_11585 PF16745 RsgA N-terminal domain JC774_11590 PF00834 Ribulose-phosphate 3 epimerase family JC774_11595 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain JC774_11595 PF04263 Thiamin pyrophosphokinase, catalytic domain JC774_11600 PF08183 Stage V sporulation protein family JC774_11605 PF00830 Ribosomal L28 family JC774_11610 PF03780 Asp23 family, cell envelope-related function JC774_11615 PF13684 Dihydroxyacetone kinase family JC774_11615 PF02734 DAK2 domain JC774_11620 PF00270 DEAD/DEAH box helicase JC774_11620 PF17191 RecG wedge domain JC774_11620 PF00271 Helicase conserved C-terminal domain JC774_11625 PF03061 Thioesterase superfamily JC774_11630 PF02504 Fatty acid synthesis protein JC774_11635 PF00698 Acyl transferase domain JC774_11645 PF00550 Phosphopantetheine attachment site JC774_11650 PF00035 Double-stranded RNA binding motif JC774_11650 PF14622 Ribonuclease-III-like JC774_11655 PF06470 SMC proteins Flexible Hinge Domain JC774_11655 PF02463 RecF/RecN/SMC N terminal domain JC774_11660 PF02881 SRP54-type protein, helical bundle domain JC774_11660 PF00448 SRP54-type protein, GTPase domain JC774_11665 PF04297 Putative helix-turn-helix protein, YlxM / p13 like JC774_11670 PF00448 SRP54-type protein, GTPase domain JC774_11670 PF02881 SRP54-type protein, helical bundle domain JC774_11670 PF02978 Signal peptide binding domain JC774_11675 PF00886 Ribosomal protein S16 JC774_11685 PF01782 RimM N-terminal domain JC774_11685 PF05239 PRC-barrel domain JC774_11690 PF01746 tRNA (Guanine-1)-methyltransferase JC774_11695 PF01245 Ribosomal protein L19 JC774_11700 PF10502 Signal peptidase, peptidase S26 JC774_11705 PF01926 50S ribosome-binding GTPase JC774_11710 PF01351 Ribonuclease HII JC774_11715 PF00549 CoA-ligase JC774_11715 PF08442 ATP-grasp domain JC774_11720 PF02629 CoA binding domain JC774_11720 PF00549 CoA-ligase JC774_11725 PF02481 DNA recombination-mediator protein A JC774_11730 PF01131 DNA topoisomerase JC774_11730 PF01751 Toprim domain JC774_11730 PF01396 Topoisomerase DNA binding C4 zinc finger JC774_11735 PF01134 Glucose inhibited division protein A JC774_11740 PF02899 Phage integrase, N-terminal SAM-like domain JC774_11740 PF00589 Phage integrase family JC774_11745 PF00227 Proteasome subunit JC774_11750 PF07724 AAA domain (Cdc48 subfamily) JC774_11750 PF10431 C-terminal, D2-small domain, of ClpB protein JC774_11755 PF08222 CodY helix-turn-helix domain JC774_11755 PF06018 CodY GAF-like domain JC774_11760 PF00318 Ribosomal protein S2 JC774_11765 PF00889 Elongation factor TS JC774_11770 PF00696 Amino acid kinase family JC774_11775 PF01765 Ribosome recycling factor JC774_11780 PF01255 Putative undecaprenyl diphosphate synthase JC774_11790 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain JC774_11790 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase JC774_11790 PF13288 DXP reductoisomerase C-terminal domain JC774_11795 PF13180 PDZ domain JC774_11795 PF02163 Peptidase family M50 JC774_11800 PF03129 Anticodon binding domain JC774_11800 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JC774_11800 PF04073 Aminoacyl-tRNA editing domain JC774_11805 PF02811 PHP domain JC774_11805 PF14579 Helix-hairpin-helix motif JC774_11805 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JC774_11805 PF00929 Exonuclease JC774_11805 PF11490 DNA polymerase III polC-type N-terminus II JC774_11805 PF14480 DNA polymerase III polC-type N-terminus I JC774_11805 PF07733 Bacterial DNA polymerase III alpha NTPase domain JC774_11810 PF17384 RimP C-terminal SH3 domain JC774_11810 PF02576 RimP N-terminal domain JC774_11815 PF13184 NusA-like KH domain JC774_11815 PF08529 NusA N-terminal domain JC774_11815 PF00575 S1 RNA binding domain JC774_11820 PF04296 Protein of unknown function (DUF448) JC774_11825 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family JC774_11830 PF04760 Translation initiation factor IF-2, N-terminal region JC774_11830 PF00009 Elongation factor Tu GTP binding domain JC774_11830 PF11987 Translation-initiation factor 2 JC774_11835 PF04456 Protein of unknown function (DUF503) JC774_11840 PF02033 Ribosome-binding factor A JC774_11845 PF01509 TruB family pseudouridylate synthase (N terminal domain) JC774_11845 PF16198 tRNA pseudouridylate synthase B C-terminal domain JC774_11850 PF01687 Riboflavin kinase JC774_11850 PF06574 FAD synthetase JC774_11855 PF00312 Ribosomal protein S15 JC774_11860 PF01138 3' exoribonuclease family, domain 1 JC774_11860 PF03725 3' exoribonuclease family, domain 2 JC774_11860 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain JC774_11860 PF00013 KH domain JC774_11860 PF00575 S1 RNA binding domain JC774_11865 PF01522 Polysaccharide deacetylase JC774_11870 PF00675 Insulinase (Peptidase family M16) JC774_11870 PF05193 Peptidase M16 inactive domain JC774_11875 PF05239 PRC-barrel domain JC774_11880 PF16924 Dipicolinate synthase subunit A N-terminal domain JC774_11880 PF01262 Alanine dehydrogenase/PNT, C-terminal domain JC774_11885 PF02441 Flavoprotein JC774_11890 PF01118 Semialdehyde dehydrogenase, NAD binding domain JC774_11890 PF02774 Semialdehyde dehydrogenase, dimerisation domain JC774_11895 PF00696 Amino acid kinase family JC774_11895 PF13840 ACT domain JC774_11900 PF00701 Dihydrodipicolinate synthetase family JC774_11915 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain JC774_11915 PF17770 Ribonuclease J C-terminal domain JC774_11915 PF00753 Metallo-beta-lactamase superfamily JC774_11940 PF00574 Clp protease JC774_11955 PF12323 Helix-turn-helix domain JC774_11955 PF07282 Putative transposase DNA-binding domain JC774_11955 PF01385 Probable transposase JC774_11960 PF17854 FtsK alpha domain JC774_11960 PF09397 Ftsk gamma domain JC774_11960 PF01580 FtsK/SpoIIIE family JC774_11965 PF07702 UTRA domain JC774_11965 PF00392 Bacterial regulatory proteins, gntR family JC774_11970 PF02608 ABC transporter substrate-binding protein PnrA-like JC774_11975 PF00005 ABC transporter JC774_11980 PF02653 Branched-chain amino acid transport system / permease component JC774_11985 PF02653 Branched-chain amino acid transport system / permease component JC774_11990 PF05193 Peptidase M16 inactive domain JC774_11995 PF00675 Insulinase (Peptidase family M16) JC774_11995 PF05193 Peptidase M16 inactive domain JC774_12005 PF11588 Protein of unknown function (DUF3243) JC774_12015 PF11868 Protein of unknown function (DUF3388) JC774_12020 PF13464 Domain of unknown function (DUF4115) JC774_12025 PF01066 CDP-alcohol phosphatidyltransferase JC774_12030 PF18146 Damage-inducible protein CinA KH domain JC774_12030 PF02464 Competence-damaged protein JC774_12030 PF00994 Probable molybdopterin binding domain JC774_12035 PF00154 recA bacterial DNA recombination protein JC774_12040 PF12072 Domain of unknown function (DUF3552) JC774_12040 PF00013 KH domain JC774_12040 PF01966 HD domain JC774_12045 PF13277 YmdB-like protein JC774_12050 PF04232 Stage V sporulation protein S (SpoVS) JC774_12055 PF01244 Membrane dipeptidase (Peptidase family M19) JC774_12060 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg JC774_12060 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II JC774_12060 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase JC774_12065 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JC774_12070 PF04055 Radical SAM superfamily JC774_12070 PF01938 TRAM domain JC774_12070 PF00919 Uncharacterized protein family UPF0004 JC774_12075 PF06133 Control of competence regulator ComK, YlbF/YmcA JC774_12080 PF10628 Outer spore coat protein E (CotE) JC774_12085 PF01624 MutS domain I JC774_12085 PF05188 MutS domain II JC774_12085 PF05190 MutS family domain IV JC774_12085 PF05192 MutS domain III JC774_12085 PF00488 MutS domain V JC774_12090 PF01119 DNA mismatch repair protein, C-terminal domain JC774_12090 PF08676 MutL C terminal dimerisation domain JC774_12100 PF00324 Amino acid permease JC774_12110 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JC774_12120 PF01546 Peptidase family M20/M25/M40 JC774_12120 PF07687 Peptidase dimerisation domain JC774_12125 PF10282 Lactonase, 7-bladed beta-propeller JC774_12130 PF01497 Periplasmic binding protein JC774_12135 PF01032 FecCD transport family JC774_12140 PF01032 FecCD transport family JC774_12145 PF00005 ABC transporter JC774_12150 PF00756 Putative esterase JC774_12155 PF02583 Metal-sensitive transcriptional repressor JC774_12160 PF00216 Bacterial DNA-binding protein JC774_12165 PF01226 Formate/nitrite transporter JC774_12185 PF04238 Protein of unknown function (DUF420) JC774_12190 PF00455 DeoR C terminal sensor domain JC774_12190 PF08220 DeoR-like helix-turn-helix domain JC774_12195 PF00294 pfkB family carbohydrate kinase JC774_12200 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JC774_12200 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JC774_12205 PF01476 LysM domain JC774_12205 PF06725 3D domain JC774_12220 PF17209 Hfq protein JC774_12235 PF00004 ATPase family associated with various cellular activities (AAA) JC774_12235 PF17866 AAA lid domain JC774_12245 PF03458 UPF0126 domain JC774_12250 PF13167 GTP-binding GTPase N-terminal JC774_12250 PF16360 GTP-binding GTPase Middle Region JC774_12250 PF01926 50S ribosome-binding GTPase JC774_12255 PF06838 Methionine gamma-lyase JC774_12260 PF13411 MerR HTH family regulatory protein JC774_12265 PF00120 Glutamine synthetase, catalytic domain JC774_12265 PF03951 Glutamine synthetase, beta-Grasp domain JC774_12315 PF00579 tRNA synthetases class I (W and Y) JC774_12325 PF01925 Sulfite exporter TauE/SafE JC774_12335 PF00392 Bacterial regulatory proteins, gntR family JC774_12335 PF00155 Aminotransferase class I and II JC774_12355 PF01022 Bacterial regulatory protein, arsR family JC774_12365 PF00144 Beta-lactamase JC774_12365 PF11954 Domain of unknown function (DUF3471) JC774_12370 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system JC774_12375 PF00872 Transposase, Mutator family JC774_12380 PF00872 Transposase, Mutator family JC774_12420 PF03551 Transcriptional regulator PadR-like family JC774_12435 PF01726 LexA DNA binding domain JC774_12435 PF00717 Peptidase S24-like JC774_12440 PF00239 Resolvase, N terminal domain JC774_12445 PF05979 Bacterial protein of unknown function (DUF896) JC774_12450 PF02872 5'-nucleotidase, C-terminal domain JC774_12450 PF00149 Calcineurin-like phosphoesterase JC774_12460 PF00005 ABC transporter JC774_12465 PF00528 Binding-protein-dependent transport system inner membrane component JC774_12470 PF00528 Binding-protein-dependent transport system inner membrane component JC774_12475 PF00456 Transketolase, thiamine diphosphate binding domain JC774_12475 PF02779 Transketolase, pyrimidine binding domain JC774_12475 PF02780 Transketolase, C-terminal domain JC774_12480 PF10747 Sporulation inhibitor of replication protein SirA JC774_12485 PF03672 Uncharacterised protein family (UPF0154) JC774_12490 PF00664 ABC transporter transmembrane region JC774_12490 PF00005 ABC transporter JC774_12495 PF00005 ABC transporter JC774_12495 PF00664 ABC transporter transmembrane region JC774_12510 PF01471 Putative peptidoglycan binding domain JC774_12510 PF01510 N-acetylmuramoyl-L-alanine amidase JC774_12520 PF01925 Sulfite exporter TauE/SafE JC774_12530 PF00324 Amino acid permease JC774_12540 PF01546 Peptidase family M20/M25/M40 JC774_12545 PF04172 LrgB-like family JC774_12550 PF03788 LrgA family JC774_12555 PF03466 LysR substrate binding domain JC774_12555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JC774_12560 PF07687 Peptidase dimerisation domain JC774_12560 PF01546 Peptidase family M20/M25/M40 JC774_12570 PF02683 Cytochrome C biogenesis protein transmembrane region JC774_12575 PF07301 Protein of unknown function (DUF1453) JC774_12580 PF11084 Protein of unknown function (DUF2621) JC774_12590 PF09021 HutP JC774_12595 PF00221 Aromatic amino acid lyase JC774_12600 PF17392 Urocanase C-terminal domain JC774_12600 PF01175 Urocanase Rossmann-like domain JC774_12600 PF17391 Urocanase N-terminal domain JC774_12605 PF01979 Amidohydrolase family JC774_12610 PF00491 Arginase family JC774_12615 PF00474 Sodium:solute symporter family JC774_12620 PF13426 PAS domain JC774_12620 PF13188 PAS domain JC774_12620 PF00989 PAS fold JC774_12620 PF00512 His Kinase A (phospho-acceptor) domain JC774_12620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC774_12630 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JC774_12630 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JC774_12640 PF01510 N-acetylmuramoyl-L-alanine amidase JC774_12665 PF01554 MatE JC774_12680 PF13936 Helix-turn-helix domain JC774_12680 PF00665 Integrase core domain JC774_12690 PF12802 MarR family JC774_12700 PF11337 Protein of unknown function (DUF3139) JC774_12770 PF00501 AMP-binding enzyme JC774_12770 PF13193 AMP-binding enzyme C-terminal domain JC774_12775 PF02272 DHHA1 domain JC774_12775 PF01411 tRNA synthetases class II (A) JC774_12775 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JC774_12785 PF10787 Uncharacterised protein from bacillus cereus group JC774_12795 PF08179 Small acid-soluble spore protein P family JC774_12805 PF01522 Polysaccharide deacetylase JC774_12815 PF00330 Aconitase family (aconitate hydratase) JC774_12815 PF00694 Aconitase C-terminal domain JC774_12825 PF13443 Cro/C1-type HTH DNA-binding domain JC774_12830 PF00578 AhpC/TSA family JC774_12835 PF01336 OB-fold nucleic acid binding domain JC774_12835 PF00929 Exonuclease JC774_12835 PF11490 DNA polymerase III polC-type N-terminus II JC774_12835 PF14579 Helix-hairpin-helix motif JC774_12835 PF07733 Bacterial DNA polymerase III alpha NTPase domain JC774_12835 PF02811 PHP domain JC774_12835 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JC774_12840 PF13040 Fur-regulated basic protein B JC774_12845 PF08177 Small acid-soluble spore protein N family JC774_12855 PF01476 LysM domain JC774_12855 PF00704 Glycosyl hydrolases family 18 JC774_12860 PF03061 Thioesterase superfamily JC774_12865 PF01521 Iron-sulphur cluster biosynthesis JC774_12870 PF02660 Glycerol-3-phosphate acyltransferase JC774_12875 PF03477 ATP cone domain JC774_12875 PF13597 Anaerobic ribonucleoside-triphosphate reductase JC774_12880 PF04055 Radical SAM superfamily JC774_12885 PF00486 Transcriptional regulatory protein, C terminal JC774_12885 PF00072 Response regulator receiver domain JC774_12890 PF13180 PDZ domain JC774_12895 PF13380 CoA binding domain JC774_12900 PF00204 DNA gyrase B JC774_12900 PF00986 DNA gyrase B subunit, carboxyl terminus JC774_12900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC774_12900 PF01751 Toprim domain JC774_12905 PF03989 DNA gyrase C-terminal domain, beta-propeller JC774_12905 PF00521 DNA gyrase/topoisomerase IV, subunit A JC774_12910 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JC774_12910 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JC774_12915 PF00375 Sodium:dicarboxylate symporter family JC774_12920 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JC774_12925 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JC774_12930 PF08241 Methyltransferase domain JC774_12965 PF00892 EamA-like transporter family JC774_12970 PF02681 Divergent PAP2 family JC774_12975 PF13243 Squalene-hopene cyclase C-terminal domain JC774_12975 PF13249 Squalene-hopene cyclase N-terminal domain JC774_12980 PF14151 YfhD-like protein JC774_12985 PF00171 Aldehyde dehydrogenase family JC774_12990 PF06196 Protein of unknown function (DUF997) JC774_12995 PF00474 Sodium:solute symporter family JC774_13010 PF08924 Domain of unknown function (DUF1906) JC774_13010 PF01471 Putative peptidoglycan binding domain JC774_13015 PF01156 Inosine-uridine preferring nucleoside hydrolase JC774_13025 PF00206 Lyase JC774_13025 PF14698 Argininosuccinate lyase C-terminal JC774_13030 PF00106 short chain dehydrogenase JC774_13040 PF00313 'Cold-shock' DNA-binding domain JC774_13045 PF00082 Subtilase family JC774_13065 PF00589 Phage integrase family JC774_13065 PF14659 Phage integrase, N-terminal SAM-like domain JC774_13105 PF01695 IstB-like ATP binding protein JC774_13105 PF07319 Primosomal protein DnaI N-terminus JC774_13185 PF01612 3'-5' exonuclease JC774_13185 PF00476 DNA polymerase family A JC774_13185 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain JC774_13185 PF01367 5'-3' exonuclease, C-terminal SAM fold JC774_13205 PF02075 Crossover junction endodeoxyribonuclease RuvC JC774_13255 PF00145 C-5 cytosine-specific DNA methylase JC774_13265 PF01555 DNA methylase JC774_13400 PF04688 SPP1 phage holin JC774_13430 PF13037 Domain of unknown function (DUF3898) JC774_13430 PF13039 Protein of unknown function (DUF3900) JC774_13440 PF04294 VanW like protein JC774_13445 PF02308 MgtC family JC774_13450 PF01565 FAD binding domain JC774_13450 PF02913 FAD linked oxidases, C-terminal domain JC774_13455 PF02696 Uncharacterized ACR, YdiU/UPF0061 family JC774_13460 PF03413 Peptidase propeptide and YPEB domain JC774_13460 PF01447 Thermolysin metallopeptidase, catalytic domain JC774_13460 PF02868 Thermolysin metallopeptidase, alpha-helical domain JC774_13460 PF07504 Fungalysin/Thermolysin Propeptide Motif JC774_13465 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading JC774_13485 PF13426 PAS domain JC774_13485 PF08447 PAS fold JC774_13485 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JC774_13495 PF13302 Acetyltransferase (GNAT) domain JC774_13500 PF03009 Glycerophosphoryl diester phosphodiesterase family JC774_13510 PF03466 LysR substrate binding domain JC774_13510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JC774_13515 PF07690 Major Facilitator Superfamily JC774_13520 PF08439 Oligopeptidase F JC774_13520 PF01432 Peptidase family M3 JC774_13530 PF00488 MutS domain V JC774_13530 PF01713 Smr domain JC774_13540 PF03600 Citrate transporter JC774_13545 PF08830 Protein of unknown function (DUF1806) JC774_13550 PF02585 GlcNAc-PI de-N-acetylase JC774_13585 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal JC774_13585 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III JC774_13630 PF00005 ABC transporter JC774_13630 PF02687 FtsX-like permease family JC774_13630 PF12704 MacB-like periplasmic core domain JC774_13635 PF02687 FtsX-like permease family JC774_13635 PF12704 MacB-like periplasmic core domain JC774_13695 PF00005 ABC transporter JC774_13695 PF02687 FtsX-like permease family JC774_13695 PF12704 MacB-like periplasmic core domain JC774_13745 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain JC774_13745 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain JC774_13745 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain JC774_13800 PF02567 Phenazine biosynthesis-like protein JC774_13815 PF06906 Protein of unknown function (DUF1272) JC774_13820 PF13411 MerR HTH family regulatory protein JC774_13825 PF01595 Cyclin M transmembrane N-terminal domain JC774_13825 PF00571 CBS domain JC774_13825 PF03471 Transporter associated domain JC774_13835 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JC774_13840 PF06039 Malate:quinone oxidoreductase (Mqo) JC774_13845 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JC774_13845 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JC774_13850 PF06445 GyrI-like small molecule binding domain JC774_13855 PF07690 Major Facilitator Superfamily JC774_13875 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain JC774_13875 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase JC774_13875 PF13288 DXP reductoisomerase C-terminal domain JC774_13890 PF13350 Tyrosine phosphatase family JC774_13910 PF00005 ABC transporter JC774_13925 PF04073 Aminoacyl-tRNA editing domain JC774_13950 PF00005 ABC transporter JC774_13960 PF14256 YwiC-like protein JC774_13980 PF02667 Short chain fatty acid transporter JC774_13985 PF00144 Beta-lactamase JC774_13990 PF07690 Major Facilitator Superfamily JC774_13995 PF01047 MarR family JC774_14000 PF00561 alpha/beta hydrolase fold JC774_14010 PF07690 Major Facilitator Superfamily JC774_14015 PF14044 NETI protein JC774_14160 PF07537 CamS sex pheromone cAM373 precursor JC774_14175 PF00266 Aminotransferase class-V JC774_14180 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JC774_14180 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JC774_14180 PF01842 ACT domain JC774_14190 PF01636 Phosphotransferase enzyme family JC774_14195 PF13439 Glycosyltransferase Family 4 JC774_14195 PF00534 Glycosyl transferases group 1 JC774_14215 PF13439 Glycosyltransferase Family 4 JC774_14215 PF00534 Glycosyl transferases group 1 JC774_14220 PF01370 NAD dependent epimerase/dehydratase family JC774_14225 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain JC774_14225 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain JC774_14225 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain JC774_14230 PF00483 Nucleotidyl transferase JC774_14240 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JC774_14255 PF07670 Nucleoside recognition JC774_14265 PF08028 Acyl-CoA dehydrogenase, C-terminal domain JC774_14265 PF02770 Acyl-CoA dehydrogenase, middle domain JC774_14265 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JC774_14270 PF03932 CutC family JC774_14275 PF10502 Signal peptidase, peptidase S26 JC774_14280 PF09339 IclR helix-turn-helix domain JC774_14280 PF01614 Bacterial transcriptional regulator JC774_14285 PF02682 Carboxyltransferase domain, subdomain C and D JC774_14290 PF02626 Carboxyltransferase domain, subdomain A and B JC774_14295 PF03746 LamB/YcsF family JC774_14310 PF01470 Pyroglutamyl peptidase JC774_14315 PF02146 Sir2 family JC774_14320 PF01569 PAP2 superfamily JC774_14330 PF00324 Amino acid permease JC774_14340 PF01925 Sulfite exporter TauE/SafE JC774_14355 PF00149 Calcineurin-like phosphoesterase JC774_14365 PF00392 Bacterial regulatory proteins, gntR family JC774_14365 PF00155 Aminotransferase class I and II JC774_14370 PF00892 EamA-like transporter family JC774_14375 PF02423 Ornithine cyclodeaminase/mu-crystallin family JC774_14380 PF07690 Major Facilitator Superfamily JC774_14380 PF00083 Sugar (and other) transporter JC774_14385 PF00583 Acetyltransferase (GNAT) family JC774_14390 PF16363 GDP-mannose 4,6 dehydratase JC774_14400 PF00293 NUDIX domain JC774_14405 PF13170 Protein of unknown function (DUF4003) JC774_14425 PF13302 Acetyltransferase (GNAT) domain JC774_14440 PF03992 Antibiotic biosynthesis monooxygenase JC774_14450 PF09706 CRISPR-associated protein (Cas_CXXC_CXXC) JC774_14465 PF18395 Cas3 C-terminal domain JC774_14465 PF00270 DEAD/DEAH box helicase JC774_14465 PF18019 HD domain JC774_14475 PF01867 CRISPR associated protein Cas1 JC774_14480 PF09827 CRISPR associated protein Cas2 JC774_14485 PF02371 Transposase IS116/IS110/IS902 family JC774_14485 PF01548 Transposase JC774_14495 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JC774_14500 PF00291 Pyridoxal-phosphate dependent enzyme JC774_14515 PF01817 Chorismate mutase type II JC774_14515 PF00793 DAHP synthetase I family JC774_14520 PF00005 ABC transporter JC774_14520 PF12848 ABC transporter JC774_14525 PF00884 Sulfatase JC774_14530 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JC774_14535 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JC774_14540 PF03611 PTS system sugar-specific permease component JC774_14545 PF01522 Polysaccharide deacetylase JC774_14555 PF00583 Acetyltransferase (GNAT) family JC774_14570 PF02522 Aminoglycoside 3-N-acetyltransferase JC774_14580 PF00005 ABC transporter JC774_14585 PF09084 NMT1/THI5 like JC774_14590 PF00528 Binding-protein-dependent transport system inner membrane component JC774_14595 PF00296 Luciferase-like monooxygenase JC774_14605 PF01594 AI-2E family transporter JC774_14630 PF16123 Hydroxyacylglutathione hydrolase C-terminus JC774_14630 PF00753 Metallo-beta-lactamase superfamily JC774_14635 PF13538 UvrD-like helicase C-terminal domain JC774_14640 PF03630 Fumble JC774_14650 PF00155 Aminotransferase class I and II JC774_14670 PF13936 Helix-turn-helix domain JC774_14670 PF00665 Integrase core domain JC774_14690 PF01385 Probable transposase JC774_14690 PF07282 Putative transposase DNA-binding domain JC774_14690 PF12323 Helix-turn-helix domain JC774_14695 PF04226 Transglycosylase associated protein JC774_14735 PF00144 Beta-lactamase JC774_14755 PF02645 Uncharacterised protein, DegV family COG1307 JC774_14830 PF13378 Enolase C-terminal domain-like JC774_14830 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain JC774_14835 PF00877 NlpC/P60 family JC774_14835 PF18348 Bacterial dipeptidyl-peptidase Sh3 domain JC774_14840 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JC774_14860 PF08876 Domain of unknown function (DUF1836) JC774_14875 PF00107 Zinc-binding dehydrogenase JC774_14875 PF08240 Alcohol dehydrogenase GroES-like domain JC774_14885 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading JC774_14885 PF18416 N-acetylglucosamine binding protein domain 2 JC774_14890 PF01368 DHH family JC774_14890 PF02833 DHHA2 domain JC774_14920 PF00270 DEAD/DEAH box helicase JC774_14920 PF00271 Helicase conserved C-terminal domain JC774_14920 PF00570 HRDC domain JC774_14920 PF16124 RecQ zinc-binding JC774_14920 PF09382 RQC domain JC774_14945 PF13673 Acetyltransferase (GNAT) domain JC774_14965 PF00574 Clp protease JC774_14970 PF04069 Substrate binding domain of ABC-type glycine betaine transport system JC774_14975 PF00005 ABC transporter JC774_14975 PF00571 CBS domain JC774_14980 PF00528 Binding-protein-dependent transport system inner membrane component JC774_14985 PF01022 Bacterial regulatory protein, arsR family JC774_14990 PF00106 short chain dehydrogenase JC774_15000 PF00266 Aminotransferase class-V JC774_15005 PF04199 Putative cyclase JC774_15010 PF03301 Tryptophan 2,3-dioxygenase JC774_15030 PF01471 Putative peptidoglycan binding domain JC774_15030 PF07486 Cell Wall Hydrolase JC774_15035 PF14620 YpeB sporulation JC774_15035 PF03413 Peptidase propeptide and YPEB domain JC774_15040 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) JC774_15055 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JC774_15055 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JC774_15060 PF04962 KduI/IolB family JC774_15065 PF00356 Bacterial regulatory proteins, lacI family JC774_15070 PF00294 pfkB family carbohydrate kinase JC774_15075 PF00171 Aldehyde dehydrogenase family JC774_15080 PF00205 Thiamine pyrophosphate enzyme, central domain JC774_15080 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JC774_15080 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JC774_15085 PF01261 Xylose isomerase-like TIM barrel JC774_15090 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JC774_15090 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JC774_15095 PF00474 Sodium:solute symporter family JC774_15100 PF03070 TENA/THI-4/PQQC family JC774_15120 PF18470 Cas9 alpha-helical lobe domain JC774_15120 PF18541 RuvC endonuclease subdomain 3 JC774_15120 PF13395 HNH endonuclease JC774_15125 PF01867 CRISPR associated protein Cas1 JC774_15130 PF09827 CRISPR associated protein Cas2 JC774_15175 PF00067 Cytochrome P450 JC774_15185 PF07561 Domain of Unknown Function (DUF1540) JC774_15200 PF00989 PAS fold JC774_15200 PF13426 PAS domain JC774_15200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC774_15200 PF13188 PAS domain JC774_15200 PF00512 His Kinase A (phospho-acceptor) domain JC774_15205 PF04303 PrpF protein JC774_15215 PF01177 Asp/Glu/Hydantoin racemase JC774_15250 PF01810 LysE type translocator JC774_15255 PF00392 Bacterial regulatory proteins, gntR family JC774_15255 PF00155 Aminotransferase class I and II JC774_15265 PF00535 Glycosyl transferase family 2 JC774_15270 PF00535 Glycosyl transferase family 2 JC774_15310 PF07690 Major Facilitator Superfamily JC774_15330 PF00293 NUDIX domain JC774_15355 PF01734 Patatin-like phospholipase JC774_15360 PF08000 Bacterial PH domain JC774_15365 PF12867 DinB superfamily JC774_15370 PF01541 GIY-YIG catalytic domain JC774_15375 PF01266 FAD dependent oxidoreductase JC774_15380 PF10676 Spore germination protein gerPA/gerPF JC774_15400 PF00344 SecY translocase JC774_15405 PF01965 DJ-1/PfpI family JC774_15420 PF01471 Putative peptidoglycan binding domain JC774_15420 PF07486 Cell Wall Hydrolase JC774_15425 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin JC774_15425 PF18277 AbrB C-terminal domain JC774_15445 PF00672 HAMP domain JC774_15445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC774_15445 PF00512 His Kinase A (phospho-acceptor) domain JC774_15450 PF00072 Response regulator receiver domain JC774_15450 PF00486 Transcriptional regulatory protein, C terminal JC774_15470 PF00005 ABC transporter JC774_15475 PF07739 TipAS antibiotic-recognition domain JC774_15475 PF13411 MerR HTH family regulatory protein JC774_15495 PF01966 HD domain JC774_15500 PF00072 Response regulator receiver domain JC774_15500 PF00486 Transcriptional regulatory protein, C terminal JC774_15505 PF16736 Single Cache-like JC774_15505 PF00989 PAS fold JC774_15505 PF00512 His Kinase A (phospho-acceptor) domain JC774_15505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC774_15510 PF00768 D-alanyl-D-alanine carboxypeptidase JC774_15510 PF07943 Penicillin-binding protein 5, C-terminal domain JC774_15520 PF00535 Glycosyl transferase family 2 JC774_15530 PF16177 Acetyl-coenzyme A synthetase N-terminus JC774_15530 PF13193 AMP-binding enzyme C-terminal domain JC774_15530 PF00501 AMP-binding enzyme JC774_15535 PF01039 Carboxyl transferase domain JC774_15540 PF00378 Enoyl-CoA hydratase/isomerase JC774_15545 PF00682 HMGL-like JC774_15550 PF00364 Biotin-requiring enzyme JC774_15555 PF02785 Biotin carboxylase C-terminal domain JC774_15555 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JC774_15555 PF00289 Biotin carboxylase, N-terminal domain JC774_15560 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JC774_15560 PF02770 Acyl-CoA dehydrogenase, middle domain JC774_15560 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JC774_15570 PF01546 Peptidase family M20/M25/M40 JC774_15570 PF07687 Peptidase dimerisation domain JC774_15575 PF04439 Streptomycin adenylyltransferase JC774_15595 PF14171 Toxin SpoIISA, type II toxin-antitoxin system JC774_15600 PF00300 Histidine phosphatase superfamily (branch 1) JC774_15610 PF00271 Helicase conserved C-terminal domain JC774_15610 PF00270 DEAD/DEAH box helicase JC774_15620 PF01869 BadF/BadG/BcrA/BcrD ATPase family JC774_15625 PF02378 Phosphotransferase system, EIIC JC774_15635 PF02638 Glycosyl hydrolase-like 10 JC774_15650 PF01596 O-methyltransferase JC774_15665 PF00005 ABC transporter JC774_15665 PF00664 ABC transporter transmembrane region JC774_15670 PF00005 ABC transporter JC774_15670 PF00664 ABC transporter transmembrane region JC774_15690 PF00313 'Cold-shock' DNA-binding domain JC774_15700 PF00248 Aldo/keto reductase family JC774_15705 PF01593 Flavin containing amine oxidoreductase JC774_15745 PF02824 TGS domain JC774_15745 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JC774_15745 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JC774_15745 PF03129 Anticodon binding domain JC774_15765 PF00216 Bacterial DNA-binding protein JC774_15785 PF03621 MbtH-like protein JC774_15790 PF00501 AMP-binding enzyme JC774_15790 PF13193 AMP-binding enzyme C-terminal domain JC774_15790 PF00668 Condensation domain JC774_15790 PF00550 Phosphopantetheine attachment site JC774_15790 PF00975 Thioesterase domain JC774_15795 PF00550 Phosphopantetheine attachment site JC774_15795 PF00857 Isochorismatase family JC774_15800 PF00501 AMP-binding enzyme JC774_15800 PF13193 AMP-binding enzyme C-terminal domain JC774_15805 PF00425 chorismate binding enzyme JC774_15810 PF00106 short chain dehydrogenase JC774_15835 PF14552 Tautomerase enzyme JC774_15845 PF03466 LysR substrate binding domain JC774_15845 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JC774_15865 PF00854 POT family JC774_15870 PF13476 AAA domain JC774_15875 PF12320 Type 5 capsule protein repressor C-terminal domain JC774_15875 PF00149 Calcineurin-like phosphoesterase JC774_15880 PF10763 Protein of unknown function (DUF2584) JC774_15890 PF00378 Enoyl-CoA hydratase/isomerase JC774_15895 PF01810 LysE type translocator JC774_15905 PF00171 Aldehyde dehydrogenase family JC774_15910 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JC774_15910 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase JC774_15915 PF02770 Acyl-CoA dehydrogenase, middle domain JC774_15915 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JC774_15915 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JC774_15925 PF03972 MmgE/PrpD family JC774_15930 PF00285 Citrate synthase, C-terminal domain JC774_15940 PF00905 Penicillin binding protein transpeptidase domain JC774_15940 PF00912 Transglycosylase JC774_15955 PF10676 Spore germination protein gerPA/gerPF JC774_15960 PF01752 Collagenase JC774_15960 PF18496 Collagenase G catalytic helper subdomain JC774_15960 PF08453 Peptidase family M9 N-terminal JC774_15965 PF08892 YqcI/YcgG family JC774_15970 PF01810 LysE type translocator JC774_15980 PF12697 Alpha/beta hydrolase family JC774_15985 PF13529 Peptidase_C39 like family JC774_15990 PF01569 PAP2 superfamily JC774_15995 PF04239 Protein of unknown function (DUF421) JC774_16000 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase JC774_16005 PF00149 Calcineurin-like phosphoesterase JC774_16020 PF04072 Leucine carboxyl methyltransferase JC774_16030 PF10711 Hypothetical protein (DUF2513) JC774_16060 PF00085 Thioredoxin JC774_16065 PF01545 Cation efflux family JC774_16065 PF16916 Dimerisation domain of Zinc Transporter JC774_16070 PF01569 PAP2 superfamily JC774_16075 PF00805 Pentapeptide repeats (8 copies) JC774_16075 PF00069 Protein kinase domain JC774_16085 PF14162 YozD-like protein JC774_16110 PF07508 Recombinase JC774_16110 PF13408 Recombinase zinc beta ribbon domain JC774_16110 PF00239 Resolvase, N terminal domain JC774_16120 PF06855 YozE SAM-like fold JC774_16125 PF14122 YokU-like protein, putative antitoxin JC774_16130 PF12544 Lysine-2,3-aminomutase JC774_16135 PF02954 Bacterial regulatory protein, Fis family JC774_16135 PF13426 PAS domain JC774_16135 PF00158 Sigma-54 interaction domain JC774_16140 PF00583 Acetyltransferase (GNAT) family JC774_16145 PF01546 Peptidase family M20/M25/M40 JC774_16145 PF07687 Peptidase dimerisation domain JC774_16150 PF01144 Coenzyme A transferase JC774_16155 PF01144 Coenzyme A transferase JC774_16160 PF00202 Aminotransferase class-III JC774_16175 PF09385 Histidine kinase N terminal JC774_16180 PF07997 Protein of unknown function (DUF1694) JC774_16185 PF00571 CBS domain JC774_16185 PF03471 Transporter associated domain JC774_16185 PF01595 Cyclin M transmembrane N-terminal domain JC774_16195 PF03063 Prismane/CO dehydrogenase family JC774_16220 PF13520 Amino acid permease JC774_16235 PF03358 NADPH-dependent FMN reductase JC774_16250 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain JC774_16250 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JC774_16255 PF02447 GntP family permease JC774_16260 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JC774_16260 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JC774_16265 PF01380 SIS domain JC774_16265 PF01418 Helix-turn-helix domain, rpiR family JC774_16275 PF00011 Hsp20/alpha crystallin family JC774_16290 PF00881 Nitroreductase family JC774_16295 PF01063 Amino-transferase class IV JC774_16305 PF00733 Asparagine synthase JC774_16305 PF13537 Glutamine amidotransferase domain JC774_16310 PF00011 Hsp20/alpha crystallin family JC774_16315 PF02630 SCO1/SenC JC774_16325 PF02645 Uncharacterised protein, DegV family COG1307 JC774_16335 PF00902 Sec-independent protein translocase protein (TatC) JC774_16340 PF02416 mttA/Hcf106 family JC774_16345 PF03006 Haemolysin-III related JC774_16350 PF01553 Acyltransferase JC774_16355 PF02525 Flavodoxin-like fold JC774_16360 PF03717 Penicillin-binding Protein dimerisation domain JC774_16360 PF05223 NTF2-like N-terminal transpeptidase domain JC774_16360 PF00905 Penicillin binding protein transpeptidase domain JC774_16365 PF00186 Dihydrofolate reductase JC774_16370 PF00303 Thymidylate synthase JC774_16375 PF07930 D-aminopeptidase, domain B JC774_16375 PF00144 Beta-lactamase JC774_16385 PF14005 YpjP-like protein JC774_16390 PF05975 Bacterial ABC transporter protein EcsB JC774_16395 PF00005 ABC transporter JC774_16410 PF00583 Acetyltransferase (GNAT) family JC774_16415 PF01980 tRNA-methyltransferase O JC774_16425 PF00465 Iron-containing alcohol dehydrogenase JC774_16430 PF10997 Alternate to MurJ JC774_16440 PF05977 Transmembrane secretion effector JC774_16445 PF00899 ThiF family JC774_16455 PF00561 alpha/beta hydrolase fold JC774_16460 PF00209 Sodium:neurotransmitter symporter family JC774_16470 PF05746 DALR anticodon binding domain JC774_16470 PF00750 tRNA synthetases class I (R) JC774_16470 PF03485 Arginyl tRNA synthetase N terminal domain JC774_16475 PF04445 Putative SAM-dependent methyltransferase JC774_16480 PF06491 Disulphide isomerase JC774_16490 PF08712 Scaffold protein Nfu/NifU N terminal JC774_16490 PF13769 Virulence factor JC774_16495 PF00436 Single-strand binding protein family JC774_16505 PF00005 ABC transporter JC774_16505 PF16326 ABC transporter C-terminal domain JC774_16505 PF12848 ABC transporter JC774_16510 PF01966 HD domain JC774_16550 PF01451 Low molecular weight phosphotyrosine protein phosphatase JC774_16555 PF01758 Sodium Bile acid symporter family JC774_16560 PF01022 Bacterial regulatory protein, arsR family JC774_16575 PF07504 Fungalysin/Thermolysin Propeptide Motif JC774_16575 PF03413 Peptidase propeptide and YPEB domain JC774_16575 PF01447 Thermolysin metallopeptidase, catalytic domain JC774_16575 PF02868 Thermolysin metallopeptidase, alpha-helical domain JC774_16585 PF00255 Glutathione peroxidase JC774_16595 PF00270 DEAD/DEAH box helicase JC774_16595 PF00271 Helicase conserved C-terminal domain JC774_16605 PF01268 Formate--tetrahydrofolate ligase JC774_16610 PF01209 ubiE/COQ5 methyltransferase family JC774_16635 PF09579 Sporulation protein YtfJ (Spore_YtfJ) JC774_16675 PF10140 WXG100 protein secretion system (Wss), protein YukC JC774_16695 PF06013 Proteins of 100 residues with WXG JC774_16720 PF00392 Bacterial regulatory proteins, gntR family JC774_16720 PF00155 Aminotransferase class I and II JC774_16725 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase JC774_16730 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase JC774_16735 PF00842 Alanine racemase, C-terminal domain JC774_16735 PF01168 Alanine racemase, N-terminal domain JC774_16750 PF01145 SPFH domain / Band 7 family JC774_16760 PF00528 Binding-protein-dependent transport system inner membrane component JC774_16765 PF00005 ABC transporter JC774_16785 PF02557 D-alanyl-D-alanine carboxypeptidase JC774_16795 PF07454 Stage II sporulation protein P (SpoIIP) JC774_16810 PF05525 Branched-chain amino acid transport protein JC774_16825 PF01595 Cyclin M transmembrane N-terminal domain JC774_16825 PF03471 Transporter associated domain JC774_16825 PF00571 CBS domain JC774_16830 PF04306 Protein of unknown function (DUF456) JC774_16850 PF13091 PLD-like domain JC774_16860 PF03061 Thioesterase superfamily JC774_16865 PF09323 Domain of unknown function (DUF1980) JC774_16870 PF03773 Predicted permease JC774_16880 PF14667 Polysaccharide biosynthesis C-terminal domain JC774_16880 PF01943 Polysaccharide biosynthesis protein JC774_16885 PF09335 SNARE associated Golgi protein JC774_16890 PF00293 NUDIX domain JC774_16895 PF08757 CotH kinase protein JC774_16905 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JC774_16910 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JC774_16925 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JC774_16940 PF07690 Major Facilitator Superfamily JC774_16945 PF01638 HxlR-like helix-turn-helix JC774_16965 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain JC774_16965 PF07685 CobB/CobQ-like glutamine amidotransferase domain JC774_16970 PF13439 Glycosyltransferase Family 4 JC774_16970 PF00534 Glycosyl transferases group 1 JC774_16985 PF07690 Major Facilitator Superfamily JC774_17010 PF01297 Zinc-uptake complex component A periplasmic JC774_17020 PF07683 Cobalamin synthesis protein cobW C-terminal domain JC774_17020 PF02492 CobW/HypB/UreG, nucleotide-binding domain JC774_17040 PF00210 Ferritin-like domain JC774_17060 PF00672 HAMP domain JC774_17060 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JC774_17060 PF02743 Cache domain JC774_17075 PF00082 Subtilase family JC774_17080 PF12823 Domain of unknown function (DUF3817) JC774_17080 PF03176 MMPL family JC774_17085 PF02687 FtsX-like permease family JC774_17090 PF02540 NAD synthase JC774_17110 PF01734 Patatin-like phospholipase JC774_17120 PF00269 Small, acid-soluble spore proteins, alpha/beta type JC774_17125 PF00583 Acetyltransferase (GNAT) family JC774_17130 PF02308 MgtC family JC774_17140 PF01522 Polysaccharide deacetylase JC774_17145 PF03816 Cell envelope-related transcriptional attenuator domain JC774_17150 PF00288 GHMP kinases N terminal domain JC774_17150 PF08544 GHMP kinases C terminal JC774_17155 PF00291 Pyridoxal-phosphate dependent enzyme JC774_17160 PF00742 Homoserine dehydrogenase JC774_17160 PF01842 ACT domain JC774_17160 PF03447 Homoserine dehydrogenase, NAD binding domain JC774_17170 PF00106 short chain dehydrogenase JC774_17175 PF00877 NlpC/P60 family JC774_17175 PF01476 LysM domain JC774_17185 PF01648 4'-phosphopantetheinyl transferase superfamily JC774_17190 PF00768 D-alanyl-D-alanine carboxypeptidase JC774_17190 PF07943 Penicillin-binding protein 5, C-terminal domain JC774_17215 PF07683 Cobalamin synthesis protein cobW C-terminal domain JC774_17215 PF02492 CobW/HypB/UreG, nucleotide-binding domain JC774_17220 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain JC774_17220 PF00056 lactate/malate dehydrogenase, NAD binding domain JC774_17225 PF01594 AI-2E family transporter JC774_17230 PF00202 Aminotransferase class-III JC774_17235 PF00171 Aldehyde dehydrogenase family JC774_17245 PF02525 Flavodoxin-like fold JC774_17250 PF00465 Iron-containing alcohol dehydrogenase JC774_17255 PF00171 Aldehyde dehydrogenase family JC774_17270 PF01131 DNA topoisomerase JC774_17270 PF01751 Toprim domain JC774_17270 PF13342 C-terminal repeat of topoisomerase JC774_17270 PF01396 Topoisomerase DNA binding C4 zinc finger JC774_17280 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JC774_17285 PF01791 DeoC/LacD family aldolase JC774_17290 PF04198 Putative sugar-binding domain JC774_17310 PF12368 Rhodanase C-terminal JC774_17310 PF00581 Rhodanese-like domain JC774_17310 PF17773 UPF0176 acylphosphatase like domain JC774_17315 PF01566 Natural resistance-associated macrophage protein JC774_17325 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JC774_17330 PF01979 Amidohydrolase family JC774_17350 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase JC774_17355 PF07690 Major Facilitator Superfamily JC774_17360 PF00899 ThiF family JC774_17365 PF00291 Pyridoxal-phosphate dependent enzyme JC774_17365 PF00585 C-terminal regulatory domain of Threonine dehydratase JC774_17370 PF00920 Dehydratase family JC774_17385 PF01063 Amino-transferase class IV JC774_17390 PF01625 Peptide methionine sulfoxide reductase JC774_17405 PF00209 Sodium:neurotransmitter symporter family JC774_17410 PF14667 Polysaccharide biosynthesis C-terminal domain JC774_17410 PF01943 Polysaccharide biosynthesis protein JC774_17415 PF00291 Pyridoxal-phosphate dependent enzyme JC774_17420 PF07690 Major Facilitator Superfamily JC774_17425 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JC774_17430 PF12848 ABC transporter JC774_17430 PF00005 ABC transporter JC774_17435 PF16360 GTP-binding GTPase Middle Region JC774_17435 PF01926 50S ribosome-binding GTPase JC774_17435 PF13167 GTP-binding GTPase N-terminal JC774_17445 PF04397 LytTr DNA-binding domain JC774_17445 PF00072 Response regulator receiver domain JC774_17450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC774_17450 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain JC774_17450 PF17203 Single cache domain 3 JC774_17450 PF00989 PAS fold JC774_17465 PF04647 Accessory gene regulator B JC774_17505 PF00005 ABC transporter JC774_17570 PF00696 Amino acid kinase family JC774_17570 PF13840 ACT domain JC774_17575 PF01040 UbiA prenyltransferase family JC774_17580 PF00440 Bacterial regulatory proteins, tetR family JC774_17585 PF03590 Aspartate-ammonia ligase JC774_17595 PF12419 SNF2 Helicase protein JC774_17595 PF00271 Helicase conserved C-terminal domain JC774_17595 PF00176 SNF2 family N-terminal domain JC774_17600 PF01810 LysE type translocator JC774_17605 PF04286 Protein of unknown function (DUF445) JC774_17610 PF03575 Peptidase family S51 JC774_17615 PF01554 MatE JC774_17635 PF10415 Fumarase C C-terminus JC774_17635 PF00206 Lyase JC774_17640 PF03553 Na+/H+ antiporter family JC774_17650 PF00892 EamA-like transporter family JC774_17655 PF00392 Bacterial regulatory proteins, gntR family JC774_17655 PF07729 FCD domain JC774_17675 PF13537 Glutamine amidotransferase domain JC774_17675 PF00733 Asparagine synthase JC774_17710 PF00005 ABC transporter JC774_17715 PF17922 Tetracyclin repressor-like, C-terminal domain JC774_17715 PF00440 Bacterial regulatory proteins, tetR family JC774_17745 PF07690 Major Facilitator Superfamily JC774_17750 PF08141 Small acid-soluble spore protein H family JC774_17755 PF17329 Family of unknown function (DUF5367) JC774_17760 PF17932 Tetracyclin repressor-like, C-terminal domain JC774_17760 PF00440 Bacterial regulatory proteins, tetR family JC774_17790 PF00005 ABC transporter JC774_17790 PF12704 MacB-like periplasmic core domain JC774_17790 PF02687 FtsX-like permease family JC774_17795 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JC774_17795 PF00460 Flagella basal body rod protein JC774_17800 PF00448 SRP54-type protein, GTPase domain JC774_17805 PF00771 FHIPEP family JC774_17810 PF01312 FlhB HrpN YscU SpaS Family JC774_17820 PF01313 Bacterial export proteins, family 3 JC774_17825 PF00813 FliP family JC774_17835 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term JC774_17840 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term JC774_17840 PF02154 Flagellar motor switch protein FliM JC774_17845 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term JC774_17850 PF01464 Transglycosylase SLT domain JC774_17855 PF00700 Bacterial flagellin C-terminal helical region JC774_17855 PF00669 Bacterial flagellin N-terminal helical region JC774_17870 PF00535 Glycosyl transferase family 2 JC774_17870 PF13181 Tetratricopeptide repeat JC774_17875 PF00700 Bacterial flagellin C-terminal helical region JC774_17875 PF00669 Bacterial flagellin N-terminal helical region JC774_17880 PF12181 DNA binding domain of the motility gene repressor (MogR) JC774_17885 PF01584 CheW-like domain JC774_17885 PF00072 Response regulator receiver domain JC774_17900 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JC774_17900 PF00460 Flagella basal body rod protein JC774_17900 PF07559 Flagellar basal body protein FlaE JC774_17920 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JC774_17920 PF02874 ATP synthase alpha/beta family, beta-barrel domain JC774_17920 PF18269 T3SS EscN ATPase C-terminal domain JC774_17930 PF01706 FliG C-terminal domain JC774_17930 PF14841 FliG middle domain JC774_17930 PF14842 FliG N-terminal domain JC774_17935 PF01514 Secretory protein of YscJ/FliF family JC774_17935 PF08345 Flagellar M-ring protein C-terminal JC774_17940 PF02049 Flagellar hook-basal body complex protein FliE JC774_17945 PF00460 Flagella basal body rod protein JC774_17945 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JC774_17950 PF00460 Flagella basal body rod protein JC774_17970 PF00700 Bacterial flagellin C-terminal helical region JC774_17970 PF00669 Bacterial flagellin N-terminal helical region JC774_17975 PF00460 Flagella basal body rod protein JC774_17975 PF06429 Flagellar basal body rod FlgEFG protein C-terminal JC774_17985 PF03885 Protein of unknown function (DUF327) JC774_17995 PF01739 CheR methyltransferase, SAM binding domain JC774_17995 PF03705 CheR methyltransferase, all-alpha domain JC774_18010 PF04509 CheC-like family JC774_18010 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term JC774_18015 PF07194 P2 response regulator binding domain JC774_18015 PF01627 Hpt domain JC774_18015 PF02895 Signal transducing histidine kinase, homodimeric domain JC774_18015 PF01584 CheW-like domain JC774_18015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC774_18020 PF00072 Response regulator receiver domain JC774_18025 PF13677 Membrane MotB of proton-channel complex MotA/MotB JC774_18025 PF00691 OmpA family JC774_18030 PF01618 MotA/TolQ/ExbB proton channel family JC774_18050 PF09680 Family of unknown function JC774_18055 PF00881 Nitroreductase family JC774_18060 PF02698 DUF218 domain JC774_18065 PF04239 Protein of unknown function (DUF421) JC774_18070 PF17770 Ribonuclease J C-terminal domain JC774_18070 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain JC774_18070 PF00753 Metallo-beta-lactamase superfamily JC774_18075 PF00999 Sodium/hydrogen exchanger family JC774_18080 PF00202 Aminotransferase class-III JC774_18085 PF00474 Sodium:solute symporter family JC774_18090 PF04341 Protein of unknown function, DUF485 JC774_18100 PF00313 'Cold-shock' DNA-binding domain JC774_18130 PF01263 Aldose 1-epimerase JC774_18135 PF13456 Reverse transcriptase-like JC774_18155 PF01638 HxlR-like helix-turn-helix JC774_18160 PF01367 5'-3' exonuclease, C-terminal SAM fold JC774_18160 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain JC774_18165 PF00689 Cation transporting ATPase, C-terminus JC774_18165 PF00690 Cation transporter/ATPase, N-terminus JC774_18170 PF03994 Domain of Unknown Function (DUF350) JC774_18200 PF00581 Rhodanese-like domain JC774_18205 PF10752 Protein of unknown function (DUF2533) JC774_18210 PF00583 Acetyltransferase (GNAT) family JC774_18220 PF00350 Dynamin family JC774_18225 PF04235 Protein of unknown function (DUF418) JC774_18230 PF00860 Permease family JC774_18235 PF00156 Phosphoribosyl transferase domain JC774_18240 PF02074 Carboxypeptidase Taq (M32) metallopeptidase JC774_18245 PF13307 Helicase C-terminal domain JC774_18255 PF02926 THUMP domain JC774_18255 PF01170 Putative RNA methylase family UPF0020 JC774_18265 PF05103 DivIVA protein JC774_18270 PF06908 YspA SLOG family JC774_18275 PF11122 Inner spore coat protein D JC774_18300 PF10720 Protein of unknown function (DUF2515) JC774_18305 PF03838 Recombination protein U JC774_18310 PF00912 Transglycosylase JC774_18310 PF00905 Penicillin binding protein transpeptidase domain JC774_18320 PF10576 Iron-sulfur binding domain of endonuclease III JC774_18320 PF00633 Helix-hairpin-helix motif JC774_18320 PF00730 HhH-GPD superfamily base excision DNA repair protein JC774_18325 PF07261 Replication initiation and membrane attachment JC774_18330 PF00155 Aminotransferase class I and II JC774_18340 PF14084 Protein of unknown function (DUF4264) JC774_18345 PF13307 Helicase C-terminal domain JC774_18345 PF04851 Type III restriction enzyme, res subunit JC774_18345 PF00929 Exonuclease JC774_18350 PF02261 Aspartate decarboxylase JC774_18355 PF02569 Pantoate-beta-alanine ligase JC774_18360 PF02548 Ketopantoate hydroxymethyltransferase JC774_18365 PF08279 HTH domain JC774_18365 PF03099 Biotin/lipoate A/B protein ligase family JC774_18365 PF02237 Biotin protein ligase C terminal domain JC774_18370 PF01743 Poly A polymerase head domain JC774_18370 PF12627 Probable RNA and SrmB- binding site of polymerase A JC774_18370 PF13735 tRNA nucleotidyltransferase domain 2 putative JC774_18375 PF13439 Glycosyltransferase Family 4 JC774_18375 PF00534 Glycosyl transferases group 1 JC774_18380 PF02585 GlcNAc-PI de-N-acetylase JC774_18385 PF02142 MGS-like domain JC774_18390 PF05173 Dihydrodipicolinate reductase, C-terminus JC774_18390 PF01113 Dihydrodipicolinate reductase, N-terminus JC774_18395 PF03819 MazG nucleotide pyrophosphohydrolase domain JC774_18400 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JC774_18400 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JC774_18410 PF04298 Putative neutral zinc metallopeptidase JC774_18425 PF07187 Protein of unknown function (DUF1405) JC774_18430 PF00032 Cytochrome b(C-terminal)/b6/petD JC774_18430 PF13442 Cytochrome C oxidase, cbb3-type, subunit III JC774_18435 PF00033 Cytochrome b/b6/petB JC774_18440 PF00355 Rieske [2Fe-2S] domain JC774_18445 PF10673 Protein of unknown function (DUF2487) JC774_18450 PF08858 IDEAL domain JC774_18450 PF08864 UPF0302 domain JC774_18460 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JC774_18465 PF00155 Aminotransferase class I and II JC774_18470 PF01761 3-dehydroquinate synthase JC774_18475 PF01264 Chorismate synthase JC774_18480 PF00334 Nucleoside diphosphate kinase JC774_18485 PF00348 Polyprenyl synthetase JC774_18490 PF01209 ubiE/COQ5 methyltransferase family JC774_18495 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 JC774_18500 PF01227 GTP cyclohydrolase I JC774_18505 PF00216 Bacterial DNA-binding protein JC774_18510 PF09547 Stage IV sporulation protein A (spore_IV_A) JC774_18520 PF10966 Protein of unknown function (DUF2768) JC774_18530 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus JC774_18530 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus JC774_18535 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal JC774_18535 PF01926 50S ribosome-binding GTPase JC774_18545 PF14045 YIEGIA protein JC774_18555 PF14140 YpzI-like protein JC774_18560 PF01070 FMN-dependent dehydrogenase JC774_18565 PF00575 S1 RNA binding domain JC774_18570 PF02224 Cytidylate kinase JC774_18580 PF00710 Asparaginase, N-terminal JC774_18580 PF17763 Glutaminase/Asparaginase C-terminal domain JC774_18600 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase JC774_18600 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain JC774_18605 PF05389 Negative regulator of genetic competence (MecA) JC774_18610 PF02607 B12 binding domain JC774_18610 PF02310 B12 binding domain JC774_18610 PF13411 MerR HTH family regulatory protein JC774_18615 PF00149 Calcineurin-like phosphoesterase JC774_18625 PF02517 CPBP intramembrane metalloprotease JC774_18630 PF00271 Helicase conserved C-terminal domain JC774_18630 PF00270 DEAD/DEAH box helicase JC774_18645 PF12822 ECF transporter, substrate-specific component JC774_18655 PF01551 Peptidase family M23 JC774_18655 PF01476 LysM domain JC774_18660 PF01923 Cobalamin adenosyltransferase JC774_18665 PF00989 PAS fold JC774_18665 PF18698 Histidine kinase sensor domain JC774_18665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC774_18665 PF00672 HAMP domain JC774_18665 PF00512 His Kinase A (phospho-acceptor) domain JC774_18670 PF00486 Transcriptional regulatory protein, C terminal JC774_18670 PF00072 Response regulator receiver domain JC774_18675 PF01578 Cytochrome C assembly protein JC774_18680 PF05140 ResB-like family JC774_18685 PF00578 AhpC/TSA family JC774_18690 PF01479 S4 domain JC774_18690 PF00849 RNA pseudouridylate synthase JC774_18695 PF07670 Nucleoside recognition JC774_18700 PF07670 Nucleoside recognition JC774_18705 PF07943 Penicillin-binding protein 5, C-terminal domain JC774_18705 PF00768 D-alanyl-D-alanine carboxypeptidase JC774_18710 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain JC774_18710 PF02777 Iron/manganese superoxide dismutases, C-terminal domain JC774_18725 PF03706 Lysylphosphatidylglycerol synthase TM region JC774_18725 PF09924 Uncharacterised conserved protein (DUF2156) JC774_18735 PF01048 Phosphorylase superfamily JC774_18740 PF00989 PAS fold JC774_18740 PF16736 Single Cache-like JC774_18740 PF00512 His Kinase A (phospho-acceptor) domain JC774_18740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC774_18745 PF00589 Phage integrase family JC774_18755 PF01904 Protein of unknown function DUF72 JC774_18760 PF00512 His Kinase A (phospho-acceptor) domain JC774_18760 PF00989 PAS fold JC774_18760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC774_18770 PF00905 Penicillin binding protein transpeptidase domain JC774_18770 PF00912 Transglycosylase JC774_18775 PF01865 Protein of unknown function DUF47 JC774_18780 PF01384 Phosphate transporter family JC774_18785 PF01925 Sulfite exporter TauE/SafE JC774_18800 PF00970 Oxidoreductase FAD-binding domain JC774_18800 PF00042 Globin JC774_18800 PF00175 Oxidoreductase NAD-binding domain JC774_18805 PF13333 Integrase core domain JC774_18805 PF00665 Integrase core domain JC774_18815 PF01238 Phosphomannose isomerase type I JC774_18820 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JC774_18820 PF02378 Phosphotransferase system, EIIC JC774_18820 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JC774_18825 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JC774_18825 PF00874 PRD domain JC774_18825 PF05043 Mga helix-turn-helix domain JC774_18825 PF08279 HTH domain JC774_18860 PF00746 LPXTG cell wall anchor motif JC774_18860 PF00565 Staphylococcal nuclease homologue JC774_18860 PF00149 Calcineurin-like phosphoesterase JC774_18860 PF02872 5'-nucleotidase, C-terminal domain JC774_18865 PF05525 Branched-chain amino acid transport protein JC774_18870 PF00072 Response regulator receiver domain JC774_18870 PF00196 Bacterial regulatory proteins, luxR family JC774_18875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC774_18875 PF00672 HAMP domain JC774_18875 PF07730 Histidine kinase JC774_18880 PF09922 Cell wall-active antibiotics response 4TMS YvqF JC774_18895 PF03553 Na+/H+ antiporter family JC774_18900 PF04167 Protein of unknown function (DUF402) JC774_18905 PF00375 Sodium:dicarboxylate symporter family JC774_18915 PF00209 Sodium:neurotransmitter symporter family JC774_18920 PF14824 Sirohaem biosynthesis protein central JC774_18920 PF10414 Sirohaem synthase dimerisation region JC774_18920 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JC774_18925 PF01903 CbiX JC774_18930 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JC774_18940 PF01077 Nitrite and sulphite reductase 4Fe-4S domain JC774_18940 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain JC774_18950 PF01747 ATP-sulfurylase JC774_18950 PF14306 PUA-like domain JC774_18955 PF01507 Phosphoadenosine phosphosulfate reductase family JC774_18965 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain JC774_18965 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain JC774_18975 PF00884 Sulfatase JC774_18980 PF01066 CDP-alcohol phosphatidyltransferase JC774_18985 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JC774_18985 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JC774_18995 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase JC774_19000 PF01502 Phosphoribosyl-AMP cyclohydrolase JC774_19005 PF00977 Histidine biosynthesis protein JC774_19010 PF00977 Histidine biosynthesis protein JC774_19015 PF00117 Glutamine amidotransferase class-I JC774_19020 PF00475 Imidazoleglycerol-phosphate dehydratase JC774_19025 PF00815 Histidinol dehydrogenase JC774_19030 PF01634 ATP phosphoribosyltransferase JC774_19035 PF13393 Histidyl-tRNA synthetase JC774_19040 PF00694 Aconitase C-terminal domain JC774_19045 PF00330 Aconitase family (aconitate hydratase) JC774_19050 PF00180 Isocitrate/isopropylmalate dehydrogenase JC774_19055 PF00682 HMGL-like JC774_19055 PF08502 LeuA allosteric (dimerisation) domain JC774_19060 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain JC774_19060 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain JC774_19065 PF10369 Small subunit of acetolactate synthase JC774_19065 PF01842 ACT domain JC774_19070 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JC774_19070 PF00205 Thiamine pyrophosphate enzyme, central domain JC774_19070 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JC774_19080 PF03698 Uncharacterised protein family (UPF0180) JC774_19090 PF09579 Sporulation protein YtfJ (Spore_YtfJ) JC774_19100 PF02386 Cation transport protein JC774_19105 PF00375 Sodium:dicarboxylate symporter family JC774_19115 PF01047 MarR family JC774_19125 PF02673 Bacitracin resistance protein BacA JC774_19130 PF01554 MatE JC774_19140 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) JC774_19145 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus JC774_19145 PF00361 Proton-conducting membrane transporter JC774_19150 PF10057 Uncharacterized conserved protein (DUF2294) JC774_19175 PF00884 Sulfatase JC774_19200 PF00258 Flavodoxin JC774_19205 PF07687 Peptidase dimerisation domain JC774_19205 PF01546 Peptidase family M20/M25/M40 JC774_19215 PF00501 AMP-binding enzyme JC774_19215 PF13193 AMP-binding enzyme C-terminal domain JC774_19220 PF03062 MBOAT, membrane-bound O-acyltransferase family JC774_19225 PF00550 Phosphopantetheine attachment site JC774_19230 PF04914 DltD protein JC774_19235 PF03060 Nitronate monooxygenase JC774_19240 PF02016 LD-carboxypeptidase N-terminal domain JC774_19240 PF17676 LD-carboxypeptidase C-terminal domain JC774_19260 PF01037 Lrp/AsnC ligand binding domain JC774_19280 PF00005 ABC transporter JC774_19290 PF00005 ABC transporter JC774_19295 PF00392 Bacterial regulatory proteins, gntR family JC774_19300 PF00268 Ribonucleotide reductase, small chain JC774_19320 PF07972 NrdI Flavodoxin like JC774_19335 PF00583 Acetyltransferase (GNAT) family JC774_19345 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) JC774_19350 PF14489 QueF-like protein JC774_19355 PF04055 Radical SAM superfamily JC774_19360 PF01242 6-pyruvoyl tetrahydropterin synthase JC774_19365 PF06508 Queuosine biosynthesis protein QueC JC774_19370 PF12867 DinB superfamily JC774_19380 PF01047 MarR family JC774_19385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC774_19385 PF00512 His Kinase A (phospho-acceptor) domain JC774_19385 PF02743 Cache domain JC774_19390 PF09388 Spo0E like sporulation regulatory protein JC774_19395 PF04748 Divergent polysaccharide deacetylase JC774_19405 PF00596 Class II Aldolase and Adducin N-terminal domain JC774_19410 PF00455 DeoR C terminal sensor domain JC774_19410 PF08220 DeoR-like helix-turn-helix domain JC774_19415 PF00266 Aminotransferase class-V JC774_19420 PF13419 Haloacid dehalogenase-like hydrolase JC774_19425 PF00528 Binding-protein-dependent transport system inner membrane component JC774_19430 PF00005 ABC transporter JC774_19430 PF08402 TOBE domain JC774_19450 PF02386 Cation transport protein JC774_19455 PF00561 alpha/beta hydrolase fold JC774_19480 PF01575 MaoC like domain JC774_19485 PF00269 Small, acid-soluble spore proteins, alpha/beta type JC774_19490 PF02386 Cation transport protein JC774_19495 PF03741 Integral membrane protein TerC family JC774_19500 PF01226 Formate/nitrite transporter JC774_19505 PF00144 Beta-lactamase JC774_19505 PF11954 Domain of unknown function (DUF3471) JC774_19510 PF00561 alpha/beta hydrolase fold JC774_19520 PF03009 Glycerophosphoryl diester phosphodiesterase family JC774_19525 PF06750 Bacterial Peptidase A24 N-terminal domain JC774_19525 PF01478 Type IV leader peptidase family JC774_19530 PF02589 LUD domain JC774_19535 PF02589 LUD domain JC774_19535 PF13183 4Fe-4S dicluster domain JC774_19535 PF11870 Domain of unknown function (DUF3390) JC774_19540 PF02754 Cysteine-rich domain JC774_19545 PF07729 FCD domain JC774_19545 PF00392 Bacterial regulatory proteins, gntR family JC774_19550 PF16736 Single Cache-like JC774_19550 PF00989 PAS fold JC774_19550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC774_19550 PF00512 His Kinase A (phospho-acceptor) domain JC774_19555 PF00072 Response regulator receiver domain JC774_19555 PF00486 Transcriptional regulatory protein, C terminal JC774_19565 PF13556 PucR C-terminal helix-turn-helix domain JC774_19565 PF17853 GGDEF-like domain JC774_19565 PF05651 Putative sugar diacid recognition JC774_19570 PF01565 FAD binding domain JC774_19570 PF02913 FAD linked oxidases, C-terminal domain JC774_19575 PF02754 Cysteine-rich domain JC774_19575 PF13183 4Fe-4S dicluster domain JC774_19580 PF00188 Cysteine-rich secretory protein family JC774_19590 PF00849 RNA pseudouridylate synthase JC774_19590 PF01479 S4 domain JC774_19600 PF03176 MMPL family JC774_19605 PF01569 PAP2 superfamily JC774_19610 PF13416 Bacterial extracellular solute-binding protein JC774_19615 PF00528 Binding-protein-dependent transport system inner membrane component JC774_19620 PF00528 Binding-protein-dependent transport system inner membrane component JC774_19625 PF08402 TOBE domain JC774_19625 PF00005 ABC transporter JC774_19630 PF00171 Aldehyde dehydrogenase family JC774_19635 PF05547 Immune inhibitor A peptidase M6 JC774_19645 PF01381 Helix-turn-helix JC774_19645 PF08671 Anti-repressor SinI JC774_19655 PF12389 Camelysin metallo-endopeptidase JC774_19675 PF00768 D-alanyl-D-alanine carboxypeptidase JC774_19675 PF07943 Penicillin-binding protein 5, C-terminal domain JC774_19690 PF00589 Phage integrase family JC774_19690 PF14659 Phage integrase, N-terminal SAM-like domain JC774_19720 PF14436 Bacterial EndoU nuclease JC774_19720 PF04740 LXG domain of WXG superfamily JC774_19795 PF18593 CdiI immunity protein JC774_19800 PF18593 CdiI immunity protein JC774_19815 PF02962 5-carboxymethyl-2-hydroxymuconate isomerase JC774_19820 PF01557 Fumarylacetoacetate (FAA) hydrolase family JC774_19825 PF01557 Fumarylacetoacetate (FAA) hydrolase family JC774_19830 PF00474 Sodium:solute symporter family JC774_19835 PF04341 Protein of unknown function, DUF485 JC774_19840 PF06574 FAD synthetase JC774_19840 PF01687 Riboflavin kinase JC774_19845 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JC774_19850 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal JC774_19850 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal JC774_19855 PF00171 Aldehyde dehydrogenase family JC774_19860 PF00701 Dihydrodipicolinate synthetase family JC774_19865 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JC774_19865 PF03466 LysR substrate binding domain JC774_19875 PF00676 Dehydrogenase E1 component JC774_19875 PF16870 2-oxoglutarate dehydrogenase C-terminal JC774_19875 PF02779 Transketolase, pyrimidine binding domain JC774_19880 PF02817 e3 binding domain JC774_19880 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JC774_19880 PF00364 Biotin-requiring enzyme JC774_19905 PF07992 Pyridine nucleotide-disulphide oxidoreductase JC774_19905 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JC774_19920 PF10042 Uncharacterized conserved protein (DUF2278) JC774_19925 PF02652 L-lactate permease JC774_19935 PF00474 Sodium:solute symporter family JC774_19940 PF02368 Bacterial Ig-like domain (group 2) JC774_19955 PF00756 Putative esterase JC774_19970 PF00580 UvrD/REP helicase N-terminal domain JC774_19970 PF13361 UvrD-like helicase C-terminal domain JC774_19985 PF04321 RmlD substrate binding domain JC774_19990 PF16363 GDP-mannose 4,6 dehydratase JC774_19995 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase JC774_20000 PF00483 Nucleotidyl transferase JC774_20020 PF13181 Tetratricopeptide repeat JC774_20020 PF00535 Glycosyl transferase family 2 JC774_20030 PF05711 Macrocin-O-methyltransferase (TylF) JC774_20035 PF08241 Methyltransferase domain JC774_20040 PF00535 Glycosyl transferase family 2 JC774_20050 PF07098 Protein of unknown function (DUF1360) JC774_20055 PF10612 Spore coat protein Z JC774_20085 PF01098 Cell cycle protein JC774_20090 PF00149 Calcineurin-like phosphoesterase JC774_20100 PF00849 RNA pseudouridylate synthase JC774_20105 PF01513 ATP-NAD kinase JC774_20110 PF04607 Region found in RelA / SpoT proteins JC774_20120 PF01928 CYTH domain JC774_20125 PF01152 Bacterial-like globin JC774_20135 PF01432 Peptidase family M3 JC774_20135 PF08439 Oligopeptidase F JC774_20145 PF13091 PLD-like domain JC774_20145 PF13396 Phospholipase_D-nuclease N-terminal JC774_20150 PF05389 Negative regulator of genetic competence (MecA) JC774_20155 PF03741 Integral membrane protein TerC family JC774_20160 PF03960 ArsC family JC774_20170 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JC774_20175 PF01554 MatE JC774_20180 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JC774_20180 PF00005 ABC transporter JC774_20185 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JC774_20185 PF00005 ABC transporter JC774_20190 PF12911 N-terminal TM domain of oligopeptide transport permease C JC774_20190 PF00528 Binding-protein-dependent transport system inner membrane component JC774_20195 PF00528 Binding-protein-dependent transport system inner membrane component JC774_20200 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JC774_20210 PF00579 tRNA synthetases class I (W and Y) JC774_20215 PF12227 Protein of unknown function (DUF3603) JC774_20220 PF10026 Predicted Zn-dependent protease (DUF2268) JC774_20225 PF00109 Beta-ketoacyl synthase, N-terminal domain JC774_20225 PF02801 Beta-ketoacyl synthase, C-terminal domain JC774_20230 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III JC774_20230 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal JC774_20235 PF10815 ComZ JC774_20255 PF02861 Clp amino terminal domain, pathogenicity island component JC774_20255 PF10431 C-terminal, D2-small domain, of ClpB protein JC774_20255 PF07724 AAA domain (Cdc48 subfamily) JC774_20255 PF17871 AAA lid domain JC774_20255 PF00004 ATPase family associated with various cellular activities (AAA) JC774_20260 PF14168 YjzC-like protein JC774_20280 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JC774_20280 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JC774_20295 PF17783 CvfB-like winged helix domain JC774_20295 PF13509 S1 domain JC774_20300 PF04461 Protein of unknown function (DUF520) JC774_20305 PF01373 Glycosyl hydrolase family 14 JC774_20305 PF03423 Carbohydrate binding domain (family 25) JC774_20305 PF00128 Alpha amylase, catalytic domain JC774_20310 PF06628 Catalase-related immune-responsive JC774_20310 PF00199 Catalase JC774_20315 PF00762 Ferrochelatase JC774_20320 PF00733 Asparagine synthase JC774_20320 PF13537 Glutamine amidotransferase domain JC774_20330 PF07457 Protein of unknown function (DUF1516) JC774_20335 PF00202 Aminotransferase class-III JC774_20340 PF01557 Fumarylacetoacetate (FAA) hydrolase family JC774_20345 PF09388 Spo0E like sporulation regulatory protein JC774_20350 PF10676 Spore germination protein gerPA/gerPF JC774_20355 PF10803 Spore germination GerPB JC774_20360 PF10737 Spore germination protein GerPC JC774_20370 PF10970 Spore germination protein GerPE JC774_20375 PF10676 Spore germination protein gerPA/gerPF JC774_20380 PF00580 UvrD/REP helicase N-terminal domain JC774_20380 PF13361 UvrD-like helicase C-terminal domain JC774_20380 PF12705 PD-(D/E)XK nuclease superfamily JC774_20385 PF13361 UvrD-like helicase C-terminal domain JC774_20385 PF12705 PD-(D/E)XK nuclease superfamily JC774_20390 PF10502 Signal peptidase, peptidase S26 JC774_20395 PF09335 SNARE associated Golgi protein JC774_20400 PF06338 ComK protein JC774_20405 PF00313 'Cold-shock' DNA-binding domain JC774_20410 PF00463 Isocitrate lyase family JC774_20415 PF01274 Malate synthase JC774_20430 PF00892 EamA-like transporter family JC774_20435 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JC774_20435 PF00672 HAMP domain JC774_20435 PF02743 Cache domain JC774_20440 PF01435 Peptidase family M48 JC774_20440 PF16491 CAAX prenyl protease N-terminal, five membrane helices JC774_20460 PF00486 Transcriptional regulatory protein, C terminal JC774_20460 PF00072 Response regulator receiver domain JC774_20465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC774_20465 PF00512 His Kinase A (phospho-acceptor) domain JC774_20475 PF07968 Leukocidin/Hemolysin toxin family JC774_20480 PF00501 AMP-binding enzyme JC774_20480 PF13193 AMP-binding enzyme C-terminal domain JC774_20490 PF03099 Biotin/lipoate A/B protein ligase family JC774_20490 PF10437 Bacterial lipoate protein ligase C-terminus JC774_20495 PF12706 Beta-lactamase superfamily domain JC774_20505 PF00356 Bacterial regulatory proteins, lacI family JC774_20520 PF00535 Glycosyl transferase family 2 JC774_20530 PF17932 Tetracyclin repressor-like, C-terminal domain JC774_20530 PF00440 Bacterial regulatory proteins, tetR family JC774_20555 PF01593 Flavin containing amine oxidoreductase JC774_20560 PF00762 Ferrochelatase JC774_20565 PF01208 Uroporphyrinogen decarboxylase (URO-D) JC774_20570 PF00905 Penicillin binding protein transpeptidase domain JC774_20570 PF00912 Transglycosylase JC774_20575 PF03992 Antibiotic biosynthesis monooxygenase JC774_20585 PF03703 Bacterial PH domain JC774_20600 PF12787 EcsC protein family JC774_20605 PF05975 Bacterial ABC transporter protein EcsB JC774_20610 PF00005 ABC transporter JC774_20615 PF01230 HIT domain JC774_20620 PF12732 YtxH-like protein JC774_20625 PF01047 MarR family JC774_20645 PF01266 FAD dependent oxidoreductase JC774_20645 PF16901 C-terminal domain of alpha-glycerophosphate oxidase JC774_20650 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JC774_20650 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JC774_20655 PF00230 Major intrinsic protein JC774_20660 PF04309 Glycerol-3-phosphate responsive antiterminator JC774_20665 PF14147 Sporulation protein YhaL JC774_20670 PF03816 Cell envelope-related transcriptional attenuator domain JC774_20680 PF00072 Response regulator receiver domain JC774_20680 PF00486 Transcriptional regulatory protein, C terminal JC774_20685 PF16736 Single Cache-like JC774_20685 PF00512 His Kinase A (phospho-acceptor) domain JC774_20685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC774_20685 PF00989 PAS fold JC774_20695 PF00005 ABC transporter JC774_20700 PF02687 FtsX-like permease family JC774_20700 PF12704 MacB-like periplasmic core domain JC774_20835 PF05065 Phage capsid family JC774_20840 PF14550 Putative phage serine protease XkdF JC774_20855 PF17288 Terminase RNAseH like domain JC774_20855 PF04466 Phage terminase large subunit JC774_20860 PF10668 Phage terminase small subunit JC774_20875 PF02796 Helix-turn-helix domain of resolvase JC774_20875 PF00239 Resolvase, N terminal domain JC774_21040 PF01381 Helix-turn-helix JC774_21050 PF02899 Phage integrase, N-terminal SAM-like domain JC774_21050 PF00589 Phage integrase family JC774_21055 PF01966 HD domain JC774_21055 PF01336 OB-fold nucleic acid binding domain JC774_21060 PF13514 AAA domain JC774_21065 PF00149 Calcineurin-like phosphoesterase JC774_21080 PF11121 Protein of unknown function (DUF2639) JC774_21095 PF01906 Putative heavy-metal-binding JC774_21100 PF02733 Dak1 domain JC774_21110 PF00232 Glycosyl hydrolase family 1 JC774_21115 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JC774_21115 PF00367 phosphotransferase system, EIIB JC774_21115 PF02378 Phosphotransferase system, EIIC JC774_21120 PF03123 CAT RNA binding domain JC774_21120 PF00874 PRD domain JC774_21135 PF12996 DUF based on E. rectale Gene description (DUF3880) JC774_21145 PF00483 Nucleotidyl transferase JC774_21150 PF16363 GDP-mannose 4,6 dehydratase JC774_21155 PF08421 Putative zinc binding domain JC774_21155 PF08484 C-methyltransferase C-terminal domain JC774_21160 PF16363 GDP-mannose 4,6 dehydratase JC774_21180 PF05853 beta-keto acid cleavage enzyme JC774_21185 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JC774_21185 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JC774_21195 PF00107 Zinc-binding dehydrogenase JC774_21195 PF08240 Alcohol dehydrogenase GroES-like domain JC774_21205 PF00474 Sodium:solute symporter family JC774_21215 PF00180 Isocitrate/isopropylmalate dehydrogenase JC774_21220 PF00171 Aldehyde dehydrogenase family JC774_21225 PF00848 Ring hydroxylating alpha subunit (catalytic domain) JC774_21225 PF00355 Rieske [2Fe-2S] domain JC774_21230 PF02954 Bacterial regulatory protein, Fis family JC774_21230 PF13188 PAS domain JC774_21230 PF00158 Sigma-54 interaction domain JC774_21235 PF02378 Phosphotransferase system, EIIC JC774_21240 PF00933 Glycosyl hydrolase family 3 N terminal domain JC774_21240 PF01915 Glycosyl hydrolase family 3 C-terminal domain JC774_21240 PF14310 Fibronectin type III-like domain JC774_21245 PF01229 Glycosyl hydrolases family 39 JC774_21250 PF13411 MerR HTH family regulatory protein JC774_21250 PF06445 GyrI-like small molecule binding domain JC774_21285 PF04556 DpnII restriction endonuclease JC774_21295 PF02086 D12 class N6 adenine-specific DNA methyltransferase JC774_21300 PF01555 DNA methylase JC774_21355 PF04634 Protein of unknown function, DUF600 JC774_21360 PF04740 LXG domain of WXG superfamily JC774_21390 PF01235 Sodium:alanine symporter family JC774_21400 PF00571 CBS domain JC774_21400 PF01769 Divalent cation transporter JC774_21400 PF03448 MgtE intracellular N domain JC774_21405 PF01520 N-acetylmuramoyl-L-alanine amidase JC774_21405 PF00395 S-layer homology domain JC774_21410 PF01520 N-acetylmuramoyl-L-alanine amidase JC774_21410 PF00395 S-layer homology domain JC774_21415 PF05343 M42 glutamyl aminopeptidase JC774_21425 PF00378 Enoyl-CoA hydratase/isomerase JC774_21440 PF03062 MBOAT, membrane-bound O-acyltransferase family JC774_21445 PF03062 MBOAT, membrane-bound O-acyltransferase family JC774_21455 PF00395 S-layer homology domain JC774_21470 PF14667 Polysaccharide biosynthesis C-terminal domain JC774_21470 PF01943 Polysaccharide biosynthesis protein JC774_21475 PF07517 SecA DEAD-like domain JC774_21475 PF01043 SecA preprotein cross-linking domain JC774_21475 PF07516 SecA Wing and Scaffold domain JC774_21495 PF00501 AMP-binding enzyme JC774_21495 PF13193 AMP-binding enzyme C-terminal domain JC774_21500 PF04055 Radical SAM superfamily JC774_21520 PF02245 Methylpurine-DNA glycosylase (MPG) JC774_21525 PF03306 Alpha-acetolactate decarboxylase JC774_21530 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JC774_21530 PF00205 Thiamine pyrophosphate enzyme, central domain JC774_21530 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JC774_21570 PF00072 Response regulator receiver domain JC774_21570 PF00196 Bacterial regulatory proteins, luxR family JC774_21575 PF07730 Histidine kinase JC774_21575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JC774_21580 PF06133 Control of competence regulator ComK, YlbF/YmcA JC774_21585 PF04286 Protein of unknown function (DUF445) JC774_21590 PF14398 YheC/D like ATP-grasp JC774_21600 PF00269 Small, acid-soluble spore proteins, alpha/beta type JC774_21605 PF00005 ABC transporter JC774_21610 PF00528 Binding-protein-dependent transport system inner membrane component JC774_21615 PF00497 Bacterial extracellular solute-binding proteins, family 3 JC774_21620 PF00005 ABC transporter JC774_21620 PF00664 ABC transporter transmembrane region JC774_21625 PF00664 ABC transporter transmembrane region JC774_21625 PF00005 ABC transporter JC774_21630 PF00171 Aldehyde dehydrogenase family JC774_21635 PF13520 Amino acid permease JC774_21650 PF01037 Lrp/AsnC ligand binding domain JC774_21655 PF00892 EamA-like transporter family JC774_21665 PF02378 Phosphotransferase system, EIIC JC774_21665 PF00367 phosphotransferase system, EIIB JC774_21670 PF13580 SIS domain JC774_21680 PF01380 SIS domain JC774_21680 PF01418 Helix-turn-helix domain, rpiR family JC774_21685 PF00999 Sodium/hydrogen exchanger family JC774_21730 PF11007 Spore coat associated protein JA (CotJA) JC774_21735 PF12652 CotJB protein JC774_21740 PF05067 Manganese containing catalase JC774_21745 PF05525 Branched-chain amino acid transport protein JC774_21750 PF09529 Integral membrane protein (intg_mem_TP0381) JC774_21760 PF00005 ABC transporter JC774_21765 PF02687 FtsX-like permease family JC774_21765 PF12704 MacB-like periplasmic core domain JC774_21775 PF07690 Major Facilitator Superfamily JC774_21780 PF02690 Na+/Pi-cotransporter JC774_21785 PF03816 Cell envelope-related transcriptional attenuator domain JC774_21805 PF04293 SpoVR like protein JC774_21815 PF00881 Nitroreductase family JC774_21820 PF03323 Bacillus/Clostridium GerA spore germination protein JC774_21830 PF03845 Spore germination protein JC774_21840 PF14148 YhdB-like protein JC774_21845 PF03816 Cell envelope-related transcriptional attenuator domain JC774_21850 PF02600 Disulfide bond formation protein DsbB JC774_21855 PF00085 Thioredoxin JC774_21870 PF03734 L,D-transpeptidase catalytic domain JC774_21880 PF00860 Permease family JC774_21890 PF01047 MarR family JC774_21895 PF07690 Major Facilitator Superfamily JC774_21900 PF02702 Osmosensitive K+ channel His kinase sensor domain JC774_21905 PF02669 K+-transporting ATPase, c chain JC774_21915 PF03814 Potassium-transporting ATPase A subunit JC774_21940 PF08543 Phosphomethylpyrimidine kinase JC774_21945 PF00899 ThiF family JC774_21950 PF05690 Thiazole biosynthesis protein ThiG JC774_21955 PF02597 ThiS family JC774_21960 PF01266 FAD dependent oxidoreductase JC774_21965 PF02581 Thiamine monophosphate synthase JC774_21970 PF09084 NMT1/THI5 like JC774_21975 PF00528 Binding-protein-dependent transport system inner membrane component JC774_21980 PF00005 ABC transporter JC774_21985 PF03070 TENA/THI-4/PQQC family