locus-tag class description FED53_00010 PF01076 Plasmid recombination enzyme FED53_00025 PF01443 Viral (Superfamily 1) RNA helicase FED53_00025 PF03389 MobA/MobL family FED53_00025 PF17841 BID domain of Bartonella effector protein (Bep) FED53_00060 PF17841 BID domain of Bartonella effector protein (Bep) FED53_00060 PF01443 Viral (Superfamily 1) RNA helicase FED53_00060 PF03389 MobA/MobL family FED53_00070 PF02661 Fic/DOC family FED53_00070 PF13784 Fic/DOC family N-terminal FED53_00075 PF13700 Domain of unknown function (DUF4158) FED53_00075 PF01526 Tn3 transposase DDE domain FED53_00080 PF00239 Resolvase, N terminal domain FED53_00080 PF02796 Helix-turn-helix domain of resolvase FED53_00085 PF13411 MerR HTH family regulatory protein FED53_00105 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FED53_00105 PF07992 Pyridine nucleotide-disulphide oxidoreductase FED53_00105 PF00403 Heavy-metal-associated domain FED53_00120 PF08241 Methyltransferase domain FED53_00125 PF10905 Protein of unknown function (DUF2695) FED53_00135 PF12802 MarR family FED53_00205 PF13419 Haloacid dehalogenase-like hydrolase FED53_00210 PF00512 His Kinase A (phospho-acceptor) domain FED53_00210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FED53_00260 PF12696 TraM recognition site of TraD and TraG FED53_00290 PF00877 NlpC/P60 family FED53_00340 PF13154 Protein of unknown function (DUF3991) FED53_00350 PF00293 NUDIX domain FED53_00355 PF03734 L,D-transpeptidase catalytic domain FED53_00385 PF00579 tRNA synthetases class I (W and Y) FED53_00390 PF01609 Transposase DDE domain FED53_00400 PF00107 Zinc-binding dehydrogenase FED53_00400 PF08240 Alcohol dehydrogenase GroES-like domain FED53_00400 PF13823 Alcohol dehydrogenase GroES-associated FED53_00405 PF01380 SIS domain FED53_00410 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family FED53_00415 PF01638 HxlR-like helix-turn-helix FED53_00420 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain FED53_00420 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain FED53_00425 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain FED53_00425 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FED53_00430 PF00342 Phosphoglucose isomerase FED53_00435 PF00465 Iron-containing alcohol dehydrogenase FED53_00440 PF13276 HTH-like domain FED53_00440 PF00665 Integrase core domain FED53_00440 PF13333 Integrase core domain FED53_00450 PF02457 DisA bacterial checkpoint controller nucleotide-binding FED53_00450 PF10372 Bacterial membrane-spanning protein N-terminus FED53_00460 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family FED53_00465 PF00239 Resolvase, N terminal domain FED53_00470 PF00916 Sulfate permease family FED53_00470 PF01740 STAS domain FED53_00475 PF00582 Universal stress protein family FED53_00480 PF00753 Metallo-beta-lactamase superfamily FED53_00480 PF17770 Ribonuclease J C-terminal domain FED53_00480 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain FED53_00485 PF00239 Resolvase, N terminal domain FED53_00485 PF02796 Helix-turn-helix domain of resolvase FED53_00490 PF01526 Tn3 transposase DDE domain FED53_00490 PF13700 Domain of unknown function (DUF4158) FED53_00500 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain FED53_00500 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FED53_00525 PF00589 Phage integrase family FED53_00540 PF00665 Integrase core domain FED53_00540 PF02796 Helix-turn-helix domain of resolvase FED53_00545 PF01695 IstB-like ATP binding protein FED53_00585 PF00269 Small, acid-soluble spore proteins, alpha/beta type FED53_00680 PF02132 RecR protein FED53_00680 PF13662 Toprim domain FED53_00685 PF02575 YbaB/EbfC DNA-binding family FED53_00690 PF12169 DNA polymerase III subunits gamma and tau domain III FED53_00700 PF14437 MafB19-like deaminase FED53_00705 PF00857 Isochorismatase family FED53_00710 PF00704 Glycosyl hydrolases family 18 FED53_00710 PF01476 LysM domain FED53_00715 PF01712 Deoxynucleoside kinase FED53_00720 PF01712 Deoxynucleoside kinase FED53_00730 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FED53_00730 PF02403 Seryl-tRNA synthetase N-terminal domain FED53_00735 PF01174 SNO glutamine amidotransferase family FED53_00740 PF01680 SOR/SNZ family FED53_00745 PF07943 Penicillin-binding protein 5, C-terminal domain FED53_00745 PF00768 D-alanyl-D-alanine carboxypeptidase FED53_00750 PF00478 IMP dehydrogenase / GMP reductase domain FED53_00750 PF00571 CBS domain FED53_00755 PF14175 YaaC-like Protein FED53_00785 PF00521 DNA gyrase/topoisomerase IV, subunit A FED53_00785 PF03989 DNA gyrase C-terminal domain, beta-propeller FED53_00790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FED53_00790 PF00986 DNA gyrase B subunit, carboxyl terminus FED53_00790 PF00204 DNA gyrase B FED53_00790 PF01751 Toprim domain FED53_00795 PF02463 RecF/RecN/SMC N terminal domain FED53_00805 PF00712 DNA polymerase III beta subunit, N-terminal domain FED53_00805 PF02768 DNA polymerase III beta subunit, C-terminal domain FED53_00805 PF02767 DNA polymerase III beta subunit, central domain FED53_00810 PF11638 DnaA N-terminal domain FED53_00810 PF00308 Bacterial dnaA protein FED53_00810 PF08299 Bacterial dnaA protein helix-turn-helix FED53_00815 PF00468 Ribosomal protein L34 FED53_00820 PF00825 Ribonuclease P FED53_00825 PF02096 60Kd inner membrane protein FED53_00830 PF14804 Jag N-terminus FED53_00830 PF01424 R3H domain FED53_00835 PF01926 50S ribosome-binding GTPase FED53_00835 PF12631 MnmE helical domain FED53_00835 PF10396 GTP-binding protein TrmE N-terminus FED53_00840 PF13932 GidA associated domain FED53_00840 PF01134 Glucose inhibited division protein A FED53_00845 PF02527 rRNA small subunit methyltransferase G FED53_00850 PF17762 HTH domain found in ParB protein FED53_00850 PF02195 ParB-like nuclease domain FED53_00855 PF13614 AAA domain FED53_00865 PF06866 Protein of unknown function (DUF1256) FED53_00875 PF00924 Mechanosensitive ion channel FED53_00880 PF06107 Bacterial protein of unknown function (DUF951) FED53_00885 PF01926 50S ribosome-binding GTPase FED53_00885 PF06071 Protein of unknown function (DUF933) FED53_00890 PF01250 Ribosomal protein S6 FED53_00895 PF00436 Single-strand binding protein family FED53_00900 PF01084 Ribosomal protein S18 FED53_00910 PF01368 DHH family FED53_00910 PF02272 DHHA1 domain FED53_00915 PF01281 Ribosomal protein L9, N-terminal domain FED53_00915 PF03948 Ribosomal protein L9, C-terminal domain FED53_00920 PF00772 DnaB-like helicase N terminal domain FED53_00920 PF03796 DnaB-like helicase C terminal domain FED53_00925 PF00709 Adenylosuccinate synthetase FED53_00950 PF00072 Response regulator receiver domain FED53_00950 PF00486 Transcriptional regulatory protein, C terminal FED53_00955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FED53_00955 PF00672 HAMP domain FED53_00955 PF00512 His Kinase A (phospho-acceptor) domain FED53_00955 PF13426 PAS domain FED53_00960 PF07435 YycH protein FED53_00965 PF09648 YycH protein FED53_00970 PF00753 Metallo-beta-lactamase superfamily FED53_00975 PF13180 PDZ domain FED53_00985 PF02590 Predicted SPOUT methyltransferase FED53_00995 PF01609 Transposase DDE domain FED53_01005 PF01609 Transposase DDE domain FED53_01010 PF00107 Zinc-binding dehydrogenase FED53_01010 PF13823 Alcohol dehydrogenase GroES-associated FED53_01010 PF08240 Alcohol dehydrogenase GroES-like domain FED53_01025 PF03323 Bacillus/Clostridium GerA spore germination protein FED53_01035 PF12832 MFS_1 like family FED53_01040 PF00027 Cyclic nucleotide-binding domain FED53_01045 PF00005 ABC transporter FED53_01045 PF09383 NIL domain FED53_01050 PF00528 Binding-protein-dependent transport system inner membrane component FED53_01055 PF03180 NLPA lipoprotein FED53_01065 PF07992 Pyridine nucleotide-disulphide oxidoreductase FED53_01065 PF13192 Thioredoxin domain FED53_01070 PF00578 AhpC/TSA family FED53_01075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FED53_01075 PF06580 Histidine kinase FED53_01075 PF00672 HAMP domain FED53_01075 PF02743 Cache domain FED53_01080 PF00072 Response regulator receiver domain FED53_01080 PF04397 LytTr DNA-binding domain FED53_01085 PF13416 Bacterial extracellular solute-binding protein FED53_01090 PF02435 Levansucrase/Invertase FED53_01095 PF08244 Glycosyl hydrolases family 32 C terminal FED53_01095 PF00251 Glycosyl hydrolases family 32 N-terminal domain FED53_01100 PF00271 Helicase conserved C-terminal domain FED53_01100 PF00270 DEAD/DEAH box helicase FED53_01100 PF03880 DbpA RNA binding domain FED53_01105 PF00128 Alpha amylase, catalytic domain FED53_01105 PF09154 Domain of unknown function (DUF1939) FED53_01110 PF00696 Amino acid kinase family FED53_01115 PF06738 Putative threonine/serine exporter FED53_01120 PF06738 Putative threonine/serine exporter FED53_01120 PF12821 Threonine/Serine exporter, ThrE FED53_01125 PF00884 Sulfatase FED53_01135 PF03023 Lipid II flippase MurJ FED53_01155 PF00535 Glycosyl transferase family 2 FED53_01160 PF00534 Glycosyl transferases group 1 FED53_01160 PF13439 Glycosyltransferase Family 4 FED53_01165 PF03372 Endonuclease/Exonuclease/phosphatase family FED53_01170 PF02378 Phosphotransferase system, EIIC FED53_01170 PF00367 phosphotransferase system, EIIB FED53_01170 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 FED53_01175 PF13419 Haloacid dehalogenase-like hydrolase FED53_01185 PF08543 Phosphomethylpyrimidine kinase FED53_01190 PF05222 Alanine dehydrogenase/PNT, N-terminal domain FED53_01190 PF01262 Alanine dehydrogenase/PNT, C-terminal domain FED53_01195 PF13556 PucR C-terminal helix-turn-helix domain FED53_01195 PF17853 GGDEF-like domain FED53_01195 PF06018 CodY GAF-like domain FED53_01200 PF01235 Sodium:alanine symporter family FED53_01205 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FED53_01205 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain FED53_01210 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain FED53_01210 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain FED53_01220 PF03167 Uracil DNA glycosylase superfamily FED53_01230 PF04241 Protein of unknown function (DUF423) FED53_01235 PF09671 Spore coat protein (Spore_GerQ) FED53_01240 PF07486 Cell Wall Hydrolase FED53_01250 PF01515 Phosphate acetyl/butaryl transferase FED53_01255 PF03099 Biotin/lipoate A/B protein ligase family FED53_01265 PF07293 Protein of unknown function (DUF1450) FED53_01270 PF01966 HD domain FED53_01280 PF01361 Tautomerase enzyme FED53_01285 PF02163 Peptidase family M50 FED53_01290 PF08741 YwhD family FED53_01295 PF00912 Transglycosylase FED53_01295 PF00905 Penicillin binding protein transpeptidase domain FED53_01300 PF17284 Spermidine synthase tetramerisation domain FED53_01305 PF00491 Arginase family FED53_01315 PF05746 DALR anticodon binding domain FED53_01315 PF03485 Arginyl tRNA synthetase N terminal domain FED53_01315 PF00750 tRNA synthetases class I (R) FED53_01320 PF03851 UV-endonuclease UvdE FED53_01325 PF13091 PLD-like domain FED53_01330 PF13183 4Fe-4S dicluster domain FED53_01330 PF02754 Cysteine-rich domain FED53_01335 PF00108 Thiolase, N-terminal domain FED53_01335 PF02803 Thiolase, C-terminal domain FED53_01340 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FED53_01340 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FED53_01345 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FED53_01345 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FED53_01345 PF02770 Acyl-CoA dehydrogenase, middle domain FED53_01350 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FED53_01350 PF02770 Acyl-CoA dehydrogenase, middle domain FED53_01350 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FED53_01360 PF01642 Methylmalonyl-CoA mutase FED53_01360 PF02310 B12 binding domain FED53_01365 PF05066 HB1, ASXL, restriction endonuclease HTH domain FED53_01370 PF06418 CTP synthase N-terminus FED53_01370 PF00117 Glutamine amidotransferase class-I FED53_01375 PF10740 Domain of unknown function (DUF2529) FED53_01380 PF00072 Response regulator receiver domain FED53_01385 PF01116 Fructose-bisphosphate aldolase class-II FED53_01390 PF00923 Transaldolase/Fructose-6-phosphate aldolase FED53_01395 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FED53_01400 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FED53_01400 PF07498 Rho termination factor, N-terminal domain FED53_01400 PF07497 Rho termination factor, RNA-binding domain FED53_01405 PF01197 Ribosomal protein L31 FED53_01410 PF00265 Thymidine kinase FED53_01420 PF03462 PCRF domain FED53_01420 PF00472 RF-1 domain FED53_01425 PF13847 Methyltransferase domain FED53_01425 PF17827 PrmC N-terminal domain FED53_01430 PF09551 Stage II sporulation protein R (spore_II_R) FED53_01440 PF01300 Telomere recombination FED53_01440 PF03481 Putative GTP-binding controlling metal-binding FED53_01445 PF02659 Putative manganese efflux pump FED53_01450 PF01451 Low molecular weight phosphotyrosine protein phosphatase FED53_01455 PF02502 Ribose/Galactose Isomerase FED53_01460 PF04260 Protein of unknown function (DUF436) FED53_01465 PF00464 Serine hydroxymethyltransferase FED53_01475 PF02350 UDP-N-acetylglucosamine 2-epimerase FED53_01480 PF13860 FlgD Ig-like domain FED53_01480 PF00082 Subtilase family FED53_01480 PF05922 Peptidase inhibitor I9 FED53_01480 PF02225 PA domain FED53_01490 PF03899 ATP synthase I chain FED53_01495 PF00119 ATP synthase A chain FED53_01500 PF00137 ATP synthase subunit C FED53_01505 PF00430 ATP synthase B/B' CF(0) FED53_01510 PF00213 ATP synthase delta (OSCP) subunit FED53_01515 PF02874 ATP synthase alpha/beta family, beta-barrel domain FED53_01515 PF00306 ATP synthase alpha/beta chain, C terminal domain FED53_01515 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FED53_01520 PF00231 ATP synthase FED53_01525 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FED53_01525 PF02874 ATP synthase alpha/beta family, beta-barrel domain FED53_01530 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain FED53_01530 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain FED53_01535 PF06612 Protein of unknown function (DUF1146) FED53_01545 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FED53_01550 PF08486 Stage II sporulation protein FED53_01555 PF01551 Peptidase family M23 FED53_01560 PF12116 Stage III sporulation protein D FED53_01570 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FED53_01570 PF00460 Flagella basal body rod protein FED53_01575 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FED53_01575 PF00460 Flagella basal body rod protein FED53_01590 PF14183 YwpF-like protein FED53_01595 PF00436 Single-strand binding protein family FED53_01600 PF01476 LysM domain FED53_01600 PF00877 NlpC/P60 family FED53_01605 PF00271 Helicase conserved C-terminal domain FED53_01605 PF12419 SNF2 Helicase protein FED53_01605 PF00176 SNF2 family N-terminal domain FED53_01615 PF00483 Nucleotidyl transferase FED53_01620 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain FED53_01620 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain FED53_01620 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain FED53_01625 PF03808 Glycosyl transferase WecB/TagA/CpsF family FED53_01630 PF15975 Flotillin FED53_01630 PF01145 SPFH domain / Band 7 family FED53_01640 PF00953 Glycosyl transferase family 4 FED53_01645 PF03816 Cell envelope-related transcriptional attenuator domain FED53_01650 PF01205 Uncharacterized protein family UPF0029 FED53_01650 PF09186 Domain of unknown function (DUF1949) FED53_01655 PF07730 Histidine kinase FED53_01655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FED53_01655 PF05384 Sensor protein DegS FED53_01660 PF00196 Bacterial regulatory proteins, luxR family FED53_01660 PF00072 Response regulator receiver domain FED53_01680 PF00700 Bacterial flagellin C-terminal helical region FED53_01680 PF00669 Bacterial flagellin N-terminal helical region FED53_01685 PF03885 Protein of unknown function (DUF327) FED53_01690 PF02645 Uncharacterised protein, DegV family COG1307 FED53_01695 PF00271 Helicase conserved C-terminal domain FED53_01695 PF04851 Type III restriction enzyme, res subunit FED53_01710 PF04316 Anti-sigma-28 factor, FlgM FED53_01720 PF00460 Flagella basal body rod protein FED53_01720 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FED53_01725 PF00669 Bacterial flagellin N-terminal helical region FED53_01725 PF00700 Bacterial flagellin C-terminal helical region FED53_01735 PF02623 FliW protein FED53_01740 PF02599 Global regulator protein family FED53_01745 PF00669 Bacterial flagellin N-terminal helical region FED53_01745 PF00700 Bacterial flagellin C-terminal helical region FED53_01750 PF00700 Bacterial flagellin C-terminal helical region FED53_01750 PF00669 Bacterial flagellin N-terminal helical region FED53_01770 PF07195 Flagellar hook-associated protein 2 C-terminus FED53_01770 PF02465 Flagellar hook-associated protein 2 N-terminus FED53_01775 PF02561 Flagellar protein FliS FED53_01785 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus FED53_01785 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein FED53_01790 PF02810 SEC-C motif FED53_01790 PF07517 SecA DEAD-like domain FED53_01790 PF01043 SecA preprotein cross-linking domain FED53_01790 PF07516 SecA Wing and Scaffold domain FED53_01800 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) FED53_01800 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 FED53_01805 PF13442 Cytochrome C oxidase, cbb3-type, subunit III FED53_01810 PF00005 ABC transporter FED53_01815 PF02687 FtsX-like permease family FED53_01815 PF18075 FtsX extracellular domain FED53_01820 PF01476 LysM domain FED53_01820 PF01551 Peptidase family M23 FED53_01820 PF08525 Opacity-associated protein A N-terminal motif FED53_01825 PF01471 Putative peptidoglycan binding domain FED53_01825 PF17820 PDZ domain FED53_01825 PF03572 Peptidase family S41 FED53_01830 PF01638 HxlR-like helix-turn-helix FED53_01835 PF02525 Flavodoxin-like fold FED53_01840 PF02525 Flavodoxin-like fold FED53_01845 PF17820 PDZ domain FED53_01850 PF01619 Proline dehydrogenase FED53_01855 PF00171 Aldehyde dehydrogenase family FED53_01860 PF00474 Sodium:solute symporter family FED53_01865 PF02954 Bacterial regulatory protein, Fis family FED53_01865 PF00158 Sigma-54 interaction domain FED53_01865 PF13426 PAS domain FED53_01870 PF00271 Helicase conserved C-terminal domain FED53_01870 PF04851 Type III restriction enzyme, res subunit FED53_01870 PF02151 UvrB/uvrC motif FED53_01870 PF12344 Ultra-violet resistance protein B FED53_01870 PF17757 UvrB interaction domain FED53_01875 PF17760 UvrA interaction domain FED53_01875 PF00005 ABC transporter FED53_01875 PF17755 UvrA DNA-binding domain FED53_01880 PF13349 Putative adhesin FED53_01885 PF04024 PspC domain FED53_01890 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV FED53_01895 PF07475 HPr Serine kinase C-terminal domain FED53_01895 PF02603 HPr Serine kinase N terminus FED53_01900 PF01790 Prolipoprotein diacylglyceryl transferase FED53_01905 PF07670 Nucleoside recognition FED53_01910 PF13419 Haloacid dehalogenase-like hydrolase FED53_01915 PF14602 Hexapeptide repeat of succinyl-transferase FED53_01920 PF13393 Histidyl-tRNA synthetase FED53_01925 PF01634 ATP phosphoribosyltransferase FED53_01930 PF00815 Histidinol dehydrogenase FED53_01935 PF00475 Imidazoleglycerol-phosphate dehydratase FED53_01940 PF00117 Glutamine amidotransferase class-I FED53_01945 PF00977 Histidine biosynthesis protein FED53_01950 PF00977 Histidine biosynthesis protein FED53_01955 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase FED53_01955 PF01502 Phosphoribosyl-AMP cyclohydrolase FED53_01965 PF07992 Pyridine nucleotide-disulphide oxidoreductase FED53_01970 PF00293 NUDIX domain FED53_01975 PF03668 P-loop ATPase protein family FED53_01980 PF01933 Uncharacterised protein family UPF0052 FED53_01985 PF10298 WhiA N-terminal LAGLIDADG-like domain FED53_01985 PF14527 WhiA LAGLIDADG-like domain FED53_01985 PF02650 WhiA C-terminal HTH domain FED53_01990 PF00381 PTS HPr component phosphorylation site FED53_01995 PF00574 Clp protease FED53_02010 PF00309 Sigma-54 factor, Activator interacting domain (AID) FED53_02010 PF04963 Sigma-54 factor, core binding domain FED53_02010 PF04552 Sigma-54, DNA binding domain FED53_02020 PF04198 Putative sugar-binding domain FED53_02025 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain FED53_02025 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FED53_02030 PF00162 Phosphoglycerate kinase FED53_02035 PF00121 Triosephosphate isomerase FED53_02040 PF06415 BPG-independent PGAM N-terminus (iPGM_N) FED53_02040 PF01676 Metalloenzyme superfamily FED53_02045 PF03952 Enolase, N-terminal domain FED53_02045 PF00113 Enolase, C-terminal TIM barrel domain FED53_02050 PF03840 Preprotein translocase SecG subunit FED53_02055 PF12146 Serine aminopeptidase, S33 FED53_02060 PF00773 RNB domain FED53_02060 PF08206 Ribonuclease B OB domain FED53_02060 PF17876 Cold shock domain FED53_02060 PF00575 S1 RNA binding domain FED53_02065 PF01668 SmpB protein FED53_02080 PF01709 Transcriptional regulator FED53_02085 PF07690 Major Facilitator Superfamily FED53_02090 PF13217 Protein of unknown function (DUF4025) FED53_02095 PF01497 Periplasmic binding protein FED53_02100 PF01032 FecCD transport family FED53_02105 PF01032 FecCD transport family FED53_02110 PF00005 ABC transporter FED53_02120 PF10835 Protein of unknown function (DUF2573) FED53_02125 PF01619 Proline dehydrogenase FED53_02130 PF14115 YuzL-like protein FED53_02135 PF00378 Enoyl-CoA hydratase/isomerase FED53_02135 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FED53_02135 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FED53_02140 PF02803 Thiolase, C-terminal domain FED53_02140 PF00108 Thiolase, N-terminal domain FED53_02145 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FED53_02145 PF02770 Acyl-CoA dehydrogenase, middle domain FED53_02145 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FED53_02150 PF03960 ArsC family FED53_02155 PF01597 Glycine cleavage H-protein FED53_02165 PF01751 Toprim domain FED53_02175 PF09383 NIL domain FED53_02175 PF00005 ABC transporter FED53_02180 PF00528 Binding-protein-dependent transport system inner membrane component FED53_02185 PF03180 NLPA lipoprotein FED53_02190 PF02627 Carboxymuconolactone decarboxylase family FED53_02195 PF00005 ABC transporter FED53_02200 PF01458 Uncharacterized protein family (UPF0051) FED53_02205 PF00266 Aminotransferase class-V FED53_02210 PF01592 NifU-like N terminal domain FED53_02215 PF01458 Uncharacterized protein family (UPF0051) FED53_02220 PF01904 Protein of unknown function DUF72 FED53_02225 PF08827 Domain of unknown function (DUF1805) FED53_02230 PF01966 HD domain FED53_02230 PF11871 Domain of unknown function (DUF3391) FED53_02245 PF03734 L,D-transpeptidase catalytic domain FED53_02255 PF13443 Cro/C1-type HTH DNA-binding domain FED53_02260 PF11188 Protein of unknown function (DUF2975) FED53_02270 PF09560 Sporulation protein YunB (Spo_YunB) FED53_02275 PF03553 Na+/H+ antiporter family FED53_02280 PF00209 Sodium:neurotransmitter symporter family FED53_02290 PF01551 Peptidase family M23 FED53_02295 PF04055 Radical SAM superfamily FED53_02295 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family FED53_02300 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) FED53_02305 PF06265 Protein of unknown function (DUF1027) FED53_02315 PF01934 Protein of unknown function DUF86 FED53_02320 PF13344 Haloacid dehalogenase-like hydrolase FED53_02325 PF04608 Phosphatidylglycerophosphatase A FED53_02335 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FED53_02335 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FED53_02340 PF01842 ACT domain FED53_02340 PF03447 Homoserine dehydrogenase, NAD binding domain FED53_02340 PF00742 Homoserine dehydrogenase FED53_02345 PF00291 Pyridoxal-phosphate dependent enzyme FED53_02350 PF08544 GHMP kinases C terminal FED53_02350 PF00288 GHMP kinases N terminal domain FED53_02355 PF01106 NifU-like domain FED53_02360 PF07315 Protein of unknown function (DUF1462) FED53_02365 PF07992 Pyridine nucleotide-disulphide oxidoreductase FED53_02370 PF07293 Protein of unknown function (DUF1450) FED53_02380 PF01678 Diaminopimelate epimerase FED53_02385 PF01521 Iron-sulphur cluster biosynthesis FED53_02395 PF07992 Pyridine nucleotide-disulphide oxidoreductase FED53_02400 PF07992 Pyridine nucleotide-disulphide oxidoreductase FED53_02405 PF14068 Putative membrane protein FED53_02410 PF06725 3D domain FED53_02415 PF02789 Cytosol aminopeptidase family, N-terminal domain FED53_02415 PF00883 Cytosol aminopeptidase family, catalytic domain FED53_02420 PF03553 Na+/H+ antiporter family FED53_02420 PF13726 Na+-H+ antiporter family FED53_02430 PF01966 HD domain FED53_02435 PF03061 Thioesterase superfamily FED53_02440 PF00929 Exonuclease FED53_02445 PF08810 Kinase associated protein B FED53_02455 PF00080 Copper/zinc superoxide dismutase (SODC) FED53_02460 PF00155 Aminotransferase class I and II FED53_02465 PF08386 TAP-like protein FED53_02465 PF00561 alpha/beta hydrolase fold FED53_02470 PF01037 Lrp/AsnC ligand binding domain FED53_02475 PF00155 Aminotransferase class I and II FED53_02480 PF00575 S1 RNA binding domain FED53_02485 PF04070 Domain of unknown function (DUF378) FED53_02490 PF00465 Iron-containing alcohol dehydrogenase FED53_02500 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) FED53_02505 PF01899 Na+/H+ ion antiporter subunit FED53_02510 PF00361 Proton-conducting membrane transporter FED53_02515 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L FED53_02520 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter FED53_02525 PF13244 Domain of unknown function (DUF4040) FED53_02525 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus FED53_02525 PF00361 Proton-conducting membrane transporter FED53_02535 PF00342 Phosphoglucose isomerase FED53_02540 PF08868 YugN-like family FED53_02545 PF02254 TrkA-N domain FED53_02545 PF07885 Ion channel FED53_02550 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FED53_02555 PF01235 Sodium:alanine symporter family FED53_02560 PF02457 DisA bacterial checkpoint controller nucleotide-binding FED53_02560 PF10372 Bacterial membrane-spanning protein N-terminus FED53_02570 PF01507 Phosphoadenosine phosphosulfate reductase family FED53_02575 PF01384 Phosphate transporter family FED53_02580 PF01747 ATP-sulfurylase FED53_02580 PF14306 PUA-like domain FED53_02590 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FED53_02595 PF01903 CbiX FED53_02600 PF14824 Sirohaem biosynthesis protein central FED53_02605 PF02308 MgtC family FED53_02610 PF00501 AMP-binding enzyme FED53_02610 PF13193 AMP-binding enzyme C-terminal domain FED53_02735 PF02806 Alpha amylase, C-terminal all-beta domain FED53_02735 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FED53_02735 PF00128 Alpha amylase, catalytic domain FED53_02745 PF00483 Nucleotidyl transferase FED53_02750 PF00534 Glycosyl transferases group 1 FED53_02750 PF08323 Starch synthase catalytic domain FED53_02755 PF00343 Carbohydrate phosphorylase FED53_02760 PF01258 Prokaryotic dksA/traR C4-type zinc finger FED53_02765 PF00425 chorismate binding enzyme FED53_02770 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FED53_02770 PF16582 Middle domain of thiamine pyrophosphate FED53_02770 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FED53_02775 PF00561 alpha/beta hydrolase fold FED53_02780 PF00378 Enoyl-CoA hydratase/isomerase FED53_02785 PF00501 AMP-binding enzyme FED53_02785 PF13193 AMP-binding enzyme C-terminal domain FED53_02790 PF13378 Enolase C-terminal domain-like FED53_02790 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FED53_02795 PF02867 Ribonucleotide reductase, barrel domain FED53_02795 PF03477 ATP cone domain FED53_02795 PF00317 Ribonucleotide reductase, all-alpha domain FED53_02800 PF00268 Ribonucleotide reductase, small chain FED53_02810 PF07561 Domain of Unknown Function (DUF1540) FED53_02825 PF02322 Cytochrome bd terminal oxidase subunit II FED53_02830 PF01654 Cytochrome bd terminal oxidase subunit I FED53_02835 PF01197 Ribosomal protein L31 FED53_02840 PF01297 Zinc-uptake complex component A periplasmic FED53_02845 PF07683 Cobalamin synthesis protein cobW C-terminal domain FED53_02845 PF02492 CobW/HypB/UreG, nucleotide-binding domain FED53_02850 PF00484 Carbonic anhydrase FED53_02855 PF01809 Putative membrane protein insertion efficiency factor FED53_02860 PF02664 S-Ribosylhomocysteinase (LuxS) FED53_02870 PF00210 Ferritin-like domain FED53_02875 PF05105 Bacteriophage holin family FED53_02885 PF00293 NUDIX domain FED53_02890 PF00528 Binding-protein-dependent transport system inner membrane component FED53_02895 PF00005 ABC transporter FED53_02905 PF00326 Prolyl oligopeptidase family FED53_02910 PF10763 Protein of unknown function (DUF2584) FED53_02915 PF01293 Phosphoenolpyruvate carboxykinase FED53_02920 PF02773 S-adenosylmethionine synthetase, C-terminal domain FED53_02920 PF02772 S-adenosylmethionine synthetase, central domain FED53_02920 PF00438 S-adenosylmethionine synthetase, N-terminal domain FED53_02925 PF00534 Glycosyl transferases group 1 FED53_02925 PF13439 Glycosyltransferase Family 4 FED53_02930 PF01569 PAP2 superfamily FED53_02935 PF00132 Bacterial transferase hexapeptide (six repeats) FED53_02940 PF12146 Serine aminopeptidase, S33 FED53_02945 PF10776 Protein of unknown function (DUF2600) FED53_02950 PF06962 Putative rRNA methylase FED53_02955 PF04055 Radical SAM superfamily FED53_02955 PF16199 Radical_SAM C-terminal domain FED53_02960 PF10732 Protein of unknown function (DUF2524) FED53_02970 PF07690 Major Facilitator Superfamily FED53_02980 PF09334 tRNA synthetases class I (M) FED53_02980 PF13603 Leucyl-tRNA synthetase, Domain 2 FED53_02980 PF00133 tRNA synthetases class I (I, L, M and V) FED53_02980 PF08264 Anticodon-binding domain of tRNA FED53_02985 PF00581 Rhodanese-like domain FED53_02990 PF10957 Sporulation protein Cse60 FED53_03000 PF01943 Polysaccharide biosynthesis protein FED53_03000 PF14667 Polysaccharide biosynthesis C-terminal domain FED53_03010 PF00849 RNA pseudouridylate synthase FED53_03010 PF01479 S4 domain FED53_03015 PF08220 DeoR-like helix-turn-helix domain FED53_03020 PF01546 Peptidase family M20/M25/M40 FED53_03025 PF00291 Pyridoxal-phosphate dependent enzyme FED53_03035 PF00128 Alpha amylase, catalytic domain FED53_03035 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FED53_03035 PF17999 Pullulanase N1-terminal domain FED53_03040 PF01636 Phosphotransferase enzyme family FED53_03045 PF14165 YtzH-like protein FED53_03050 PF02390 Putative methyltransferase FED53_03055 PF00753 Metallo-beta-lactamase superfamily FED53_03065 PF05343 M42 glutamyl aminopeptidase FED53_03070 PF01931 Protein of unknown function DUF84 FED53_03075 PF00085 Thioredoxin FED53_03080 PF07285 Protein of unknown function (DUF1444) FED53_03085 PF14794 Domain of unknown function (DUF4479) FED53_03085 PF01588 Putative tRNA binding domain FED53_03090 PF01580 FtsK/SpoIIIE family FED53_03090 PF09397 Ftsk gamma domain FED53_03090 PF17854 FtsK alpha domain FED53_03100 PF08245 Mur ligase middle domain FED53_03100 PF02875 Mur ligase family, glutamate ligase domain FED53_03100 PF01225 Mur ligase family, catalytic domain FED53_03115 PF12732 YtxH-like protein FED53_03120 PF11009 Protein of unknown function (DUF2847) FED53_03125 PF01817 Chorismate mutase type II FED53_03125 PF00793 DAHP synthetase I family FED53_03130 PF00356 Bacterial regulatory proteins, lacI family FED53_03135 PF01618 MotA/TolQ/ExbB proton channel family FED53_03140 PF00691 OmpA family FED53_03140 PF13677 Membrane MotB of proton-channel complex MotA/MotB FED53_03145 PF00850 Histone deacetylase domain FED53_03150 PF00571 CBS domain FED53_03155 PF00583 Acetyltransferase (GNAT) family FED53_03160 PF13193 AMP-binding enzyme C-terminal domain FED53_03160 PF00501 AMP-binding enzyme FED53_03165 PF01479 S4 domain FED53_03165 PF00579 tRNA synthetases class I (W and Y) FED53_03170 PF01479 S4 domain FED53_03170 PF00163 Ribosomal protein S4/S9 N-terminal domain FED53_03180 PF00990 Diguanylate cyclase, GGDEF domain FED53_03185 PF13185 GAF domain FED53_03190 PF00440 Bacterial regulatory proteins, tetR family FED53_03195 PF02811 PHP domain FED53_03200 PF06160 Septation ring formation regulator, EzrA FED53_03205 PF05525 Branched-chain amino acid transport protein FED53_03210 PF00266 Aminotransferase class-V FED53_03215 PF02568 Thiamine biosynthesis protein (ThiI) FED53_03215 PF02926 THUMP domain FED53_03220 PF00269 Small, acid-soluble spore proteins, alpha/beta type FED53_03225 PF07969 Amidohydrolase family FED53_03230 PF01513 ATP-NAD kinase FED53_03235 PF01343 Peptidase family S49 FED53_03240 PF06271 RDD family FED53_03250 PF09579 Sporulation protein YtfJ (Spore_YtfJ) FED53_03255 PF08534 Redoxin FED53_03260 PF02384 N-6 DNA Methylase FED53_03265 PF00871 Acetokinase family FED53_03280 PF00764 Arginosuccinate synthase FED53_03285 PF00206 Lyase FED53_03285 PF14698 Argininosuccinate lyase C-terminal FED53_03290 PF05222 Alanine dehydrogenase/PNT, N-terminal domain FED53_03290 PF01262 Alanine dehydrogenase/PNT, C-terminal domain FED53_03305 PF00392 Bacterial regulatory proteins, gntR family FED53_03305 PF00571 CBS domain FED53_03305 PF07085 DRTGG domain FED53_03305 PF03061 Thioesterase superfamily FED53_03315 PF01368 DHH family FED53_03315 PF02272 DHHA1 domain FED53_03325 PF14034 Sporulation protein YtrH FED53_03330 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FED53_03330 PF07733 Bacterial DNA polymerase III alpha NTPase domain FED53_03330 PF14579 Helix-hairpin-helix motif FED53_03330 PF02811 PHP domain FED53_03330 PF01336 OB-fold nucleic acid binding domain FED53_03335 PF03949 Malic enzyme, NAD binding domain FED53_03335 PF00390 Malic enzyme, N-terminal domain FED53_03340 PF00392 Bacterial regulatory proteins, gntR family FED53_03345 PF01039 Carboxyl transferase domain FED53_03345 PF17848 Acetyl-coA carboxylase zinc finger domain FED53_03350 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit FED53_03355 PF00391 PEP-utilising enzyme, mobile domain FED53_03355 PF00224 Pyruvate kinase, barrel domain FED53_03355 PF02887 Pyruvate kinase, alpha/beta domain FED53_03360 PF04186 FxsA cytoplasmic membrane protein FED53_03365 PF01594 AI-2E family transporter FED53_03370 PF04284 Protein of unknown function (DUF441) FED53_03375 PF00285 Citrate synthase, C-terminal domain FED53_03380 PF00180 Isocitrate/isopropylmalate dehydrogenase FED53_03385 PF00056 lactate/malate dehydrogenase, NAD binding domain FED53_03385 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain FED53_03395 PF00072 Response regulator receiver domain FED53_03395 PF00486 Transcriptional regulatory protein, C terminal FED53_03400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FED53_03400 PF00512 His Kinase A (phospho-acceptor) domain FED53_03400 PF00989 PAS fold FED53_03400 PF16736 Single Cache-like FED53_03405 PF01367 5'-3' exonuclease, C-terminal SAM fold FED53_03405 PF00476 DNA polymerase family A FED53_03405 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain FED53_03410 PF06827 Zinc finger found in FPG and IleRS FED53_03410 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain FED53_03410 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain FED53_03415 PF02659 Putative manganese efflux pump FED53_03420 PF01121 Dephospho-CoA kinase FED53_03425 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FED53_03425 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain FED53_03430 PF02675 S-adenosylmethionine decarboxylase FED53_03440 PF03477 ATP cone domain FED53_03445 PF07261 Replication initiation and membrane attachment FED53_03450 PF07319 Primosomal protein DnaI N-terminus FED53_03450 PF01695 IstB-like ATP binding protein FED53_03455 PF08812 YtxC-like family FED53_03460 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FED53_03460 PF02824 TGS domain FED53_03460 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FED53_03460 PF03129 Anticodon binding domain FED53_03465 PF05198 Translation initiation factor IF-3, N-terminal domain FED53_03465 PF00707 Translation initiation factor IF-3, C-terminal domain FED53_03470 PF01632 Ribosomal protein L35 FED53_03475 PF00453 Ribosomal protein L20 FED53_03480 PF06961 Protein of unknown function (DUF1294) FED53_03495 PF05343 M42 glutamyl aminopeptidase FED53_03500 PF14098 Small, acid-soluble spore protein I FED53_03505 PF00588 SpoU rRNA Methylase family FED53_03505 PF08032 RNA 2'-O ribose methyltransferase substrate binding FED53_03510 PF01409 tRNA synthetases class II core domain (F) FED53_03510 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain FED53_03515 PF03484 tRNA synthetase B5 domain FED53_03515 PF03147 Ferredoxin-fold anticodon binding domain FED53_03515 PF01588 Putative tRNA binding domain FED53_03515 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain FED53_03515 PF03483 B3/4 domain FED53_03525 PF05164 Cell division protein ZapA FED53_03530 PF02674 Colicin V production protein FED53_03535 PF14791 DNA polymerase beta thumb FED53_03535 PF14716 Helix-hairpin-helix domain FED53_03535 PF02811 PHP domain FED53_03540 PF01713 Smr domain FED53_03540 PF00488 MutS domain V FED53_03545 PF03994 Domain of Unknown Function (DUF350) FED53_03550 PF00501 AMP-binding enzyme FED53_03550 PF13193 AMP-binding enzyme C-terminal domain FED53_03555 PF00440 Bacterial regulatory proteins, tetR family FED53_03555 PF08359 YsiA-like protein, C-terminal region FED53_03560 PF00378 Enoyl-CoA hydratase/isomerase FED53_03565 PF01012 Electron transfer flavoprotein domain FED53_03570 PF00766 Electron transfer flavoprotein FAD-binding domain FED53_03570 PF01012 Electron transfer flavoprotein domain FED53_03575 PF00085 Thioredoxin FED53_03580 PF01541 GIY-YIG catalytic domain FED53_03580 PF08459 UvrC Helix-hairpin-helix N-terminal FED53_03580 PF02151 UvrB/uvrC motif FED53_03585 PF00696 Amino acid kinase family FED53_03585 PF13840 ACT domain FED53_03585 PF01842 ACT domain FED53_03590 PF10702 Protein of unknown function (DUF2507) FED53_03595 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit FED53_03600 PF02910 Fumarate reductase flavoprotein C-term FED53_03600 PF00890 FAD binding domain FED53_03605 PF13183 4Fe-4S dicluster domain FED53_03605 PF13085 2Fe-2S iron-sulfur cluster binding domain FED53_03610 PF00196 Bacterial regulatory proteins, luxR family FED53_03620 PF02080 TrkA-C domain FED53_03625 PF00999 Sodium/hydrogen exchanger family FED53_03635 PF03717 Penicillin-binding Protein dimerisation domain FED53_03635 PF00905 Penicillin binding protein transpeptidase domain FED53_03635 PF05223 NTF2-like N-terminal transpeptidase domain FED53_03640 PF01865 Protein of unknown function DUF47 FED53_03645 PF01384 Phosphate transporter family FED53_03650 PF01047 MarR family FED53_03655 PF01177 Asp/Glu/Hydantoin racemase FED53_03660 PF10646 Sporulation and spore germination FED53_03665 PF01138 3' exoribonuclease family, domain 1 FED53_03665 PF03725 3' exoribonuclease family, domain 2 FED53_03670 PF01725 Ham1 family FED53_03675 PF12850 Calcineurin-like phosphoesterase superfamily domain FED53_03685 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FED53_03685 PF00205 Thiamine pyrophosphate enzyme, central domain FED53_03685 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FED53_03690 PF01842 ACT domain FED53_03690 PF10369 Small subunit of acetolactate synthase FED53_03695 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain FED53_03695 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain FED53_03700 PF08502 LeuA allosteric (dimerisation) domain FED53_03700 PF00682 HMGL-like FED53_03705 PF00180 Isocitrate/isopropylmalate dehydrogenase FED53_03710 PF00330 Aconitase family (aconitate hydratase) FED53_03715 PF00694 Aconitase C-terminal domain FED53_03725 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FED53_03725 PF05697 Bacterial trigger factor protein (TF) FED53_03725 PF05698 Bacterial trigger factor protein (TF) C-terminus FED53_03730 PF07724 AAA domain (Cdc48 subfamily) FED53_03730 PF06689 ClpX C4-type zinc finger FED53_03730 PF10431 C-terminal, D2-small domain, of ClpB protein FED53_03735 PF00004 ATPase family associated with various cellular activities (AAA) FED53_03735 PF05362 Lon protease (S16) C-terminal proteolytic domain FED53_03740 PF00004 ATPase family associated with various cellular activities (AAA) FED53_03740 PF05362 Lon protease (S16) C-terminal proteolytic domain FED53_03740 PF02190 ATP-dependent protease La (LON) substrate-binding domain FED53_03745 PF01926 50S ribosome-binding GTPase FED53_03755 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain FED53_03755 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain FED53_03755 PF01488 Shikimate / quinate 5-dehydrogenase FED53_03760 PF01578 Cytochrome C assembly protein FED53_03765 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain FED53_03765 PF03900 Porphobilinogen deaminase, C-terminal domain FED53_03775 PF00490 Delta-aminolevulinic acid dehydratase FED53_03780 PF00202 Aminotransferase class-III FED53_03785 PF01476 LysM domain FED53_03800 PF10458 Valyl tRNA synthetase tRNA binding arm FED53_03800 PF08264 Anticodon-binding domain of tRNA FED53_03800 PF00133 tRNA synthetases class I (I, L, M and V) FED53_03805 PF02875 Mur ligase family, glutamate ligase domain FED53_03805 PF08245 Mur ligase middle domain FED53_03815 PF04238 Protein of unknown function (DUF420) FED53_03825 PF00482 Type II secretion system (T2SS), protein F FED53_03830 PF07963 Prokaryotic N-terminal methylation motif FED53_03830 PF08334 Type II secretion system (T2SS), protein G FED53_03835 PF06750 Bacterial Peptidase A24 N-terminal domain FED53_03835 PF01478 Type IV leader peptidase family FED53_03865 PF02545 Maf-like protein FED53_03870 PF04002 RadC-like JAB domain FED53_03880 PF04085 rod shape-determining protein MreC FED53_03885 PF04093 rod shape-determining protein MreD FED53_03890 PF03775 Septum formation inhibitor MinC, C-terminal domain FED53_03895 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FED53_03900 PF01551 Peptidase family M23 FED53_03905 PF02163 Peptidase family M50 FED53_03910 PF00575 S1 RNA binding domain FED53_03910 PF10150 Ribonuclease E/G family FED53_03915 PF00829 Ribosomal prokaryotic L21 protein FED53_03920 PF04327 Cysteine protease Prp FED53_03925 PF01016 Ribosomal L27 protein FED53_03930 PF14682 Sporulation initiation phospho-transferase B, C-terminal FED53_03930 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain FED53_03935 PF01018 GTP1/OBG FED53_03935 PF01926 50S ribosome-binding GTPase FED53_03935 PF09269 Domain of unknown function (DUF1967) FED53_03940 PF01842 ACT domain FED53_03945 PF01842 ACT domain FED53_03945 PF00800 Prephenate dehydratase FED53_03950 PF02829 3H domain FED53_03950 PF08279 HTH domain FED53_03955 PF00266 Aminotransferase class-V FED53_03960 PF02910 Fumarate reductase flavoprotein C-term FED53_03960 PF00890 FAD binding domain FED53_03965 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain FED53_03965 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain FED53_03970 PF02445 Quinolinate synthetase A protein FED53_03975 PF01476 LysM domain FED53_03990 PF08955 BofC C-terminal domain FED53_03990 PF08977 Bypass of Forespore C, N terminal FED53_04000 PF05496 Holliday junction DNA helicase RuvB P-loop domain FED53_04000 PF05491 RuvB C-terminal winged helix domain FED53_04000 PF17864 RuvB AAA lid domain FED53_04005 PF11146 Protein of unknown function (DUF2905) FED53_04010 PF02547 Queuosine biosynthesis protein FED53_04020 PF02699 Preprotein translocase subunit FED53_04025 PF12670 Protein of unknown function (DUF3792) FED53_04030 PF04239 Protein of unknown function (DUF421) FED53_04035 PF01943 Polysaccharide biosynthesis protein FED53_04035 PF14667 Polysaccharide biosynthesis C-terminal domain FED53_04040 PF13797 Post-transcriptional regulator FED53_04045 PF02355 Protein export membrane protein FED53_04045 PF07549 SecD/SecF GG Motif FED53_04050 PF01545 Cation efflux family FED53_04050 PF16916 Dimerisation domain of Zinc Transporter FED53_04055 PF17768 RecJ OB domain FED53_04055 PF01368 DHH family FED53_04055 PF02272 DHHA1 domain FED53_04055 PF10141 Single-strand DNA-specific exonuclease, C terminal domain FED53_04060 PF00156 Phosphoribosyl transferase domain FED53_04065 PF02824 TGS domain FED53_04065 PF04607 Region found in RelA / SpoT proteins FED53_04065 PF13291 ACT domain FED53_04070 PF02580 D-Tyr-tRNA(Tyr) deacylase FED53_04075 PF08239 Bacterial SH3 domain FED53_04075 PF01520 N-acetylmuramoyl-L-alanine amidase FED53_04085 PF03129 Anticodon binding domain FED53_04085 PF13393 Histidyl-tRNA synthetase FED53_04090 PF02938 GAD domain FED53_04090 PF00152 tRNA synthetases class II (D, K and N) FED53_04090 PF01336 OB-fold nucleic acid binding domain FED53_04100 PF00899 ThiF family FED53_04105 PF12002 MgsA AAA+ ATPase C terminal FED53_04105 PF05496 Holliday junction DNA helicase RuvB P-loop domain FED53_04105 PF16193 AAA C-terminal domain FED53_04110 PF02082 Transcriptional regulator FED53_04115 PF00266 Aminotransferase class-V FED53_04130 PF14490 Helix-hairpin-helix containing domain FED53_04130 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain FED53_04130 PF13538 UvrD-like helicase C-terminal domain FED53_04145 PF01594 AI-2E family transporter FED53_04150 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FED53_04150 PF01411 tRNA synthetases class II (A) FED53_04150 PF02272 DHHA1 domain FED53_04155 PF06135 IreB regulatory phosphoprotein FED53_04160 PF03652 Holliday junction resolvase FED53_04165 PF06949 Protein of unknown function (DUF1292) FED53_04170 PF02618 YceG-like family FED53_04190 PF00485 Phosphoribulokinase / Uridine kinase family FED53_04195 PF01272 Transcription elongation factor, GreA/GreB, C-term FED53_04195 PF03449 Transcription elongation factor, N-terminal FED53_04200 PF03717 Penicillin-binding Protein dimerisation domain FED53_04200 PF00905 Penicillin binding protein transpeptidase domain FED53_04210 PF10750 Protein of unknown function (DUF2536) FED53_04215 PF08241 Methyltransferase domain FED53_04220 PF01048 Phosphorylase superfamily FED53_04225 PF00291 Pyridoxal-phosphate dependent enzyme FED53_04230 PF01053 Cys/Met metabolism PLP-dependent enzyme FED53_04240 PF04542 Sigma-70 region 2 FED53_04240 PF04545 Sigma-70, region 4 FED53_04245 PF01066 CDP-alcohol phosphatidyltransferase FED53_04250 PF08970 Sporulation inhibitor A FED53_04260 PF01926 50S ribosome-binding GTPase FED53_04265 PF08501 Shikimate dehydrogenase substrate binding domain FED53_04265 PF18317 Shikimate 5'-dehydrogenase C-terminal domain FED53_04265 PF01488 Shikimate / quinate 5-dehydrogenase FED53_04270 PF01985 CRS1 / YhbY (CRM) domain FED53_04275 PF01467 Cytidylyltransferase-like FED53_04280 PF01966 HD domain FED53_04290 PF13649 Methyltransferase domain FED53_04295 PF14748 Pyrroline-5-carboxylate reductase dimerisation FED53_04295 PF03807 NADP oxidoreductase coenzyme F420-dependent FED53_04300 PF10531 SLBB domain FED53_04305 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FED53_04310 PF13567 Domain of unknown function (DUF4131) FED53_04310 PF00753 Metallo-beta-lactamase superfamily FED53_04310 PF03772 Competence protein FED53_04315 PF14141 YqzM-like protein FED53_04320 PF06144 DNA polymerase III, delta subunit FED53_04325 PF01649 Ribosomal protein S20 FED53_04330 PF03418 Germination protease FED53_04340 PF00679 Elongation factor G C-terminus FED53_04340 PF03144 Elongation factor Tu domain 2 FED53_04340 PF00009 Elongation factor Tu GTP binding domain FED53_04340 PF06421 GTP-binding protein LepA C-terminus FED53_04345 PF06969 HemN C-terminal domain FED53_04345 PF04055 Radical SAM superfamily FED53_04350 PF01628 HrcA protein C terminal domain FED53_04355 PF01025 GrpE FED53_04360 PF00012 Hsp70 protein FED53_04365 PF00226 DnaJ domain FED53_04365 PF00684 DnaJ central domain FED53_04365 PF01556 DnaJ C terminal domain FED53_04375 PF04452 RNA methyltransferase FED53_04380 PF04055 Radical SAM superfamily FED53_04380 PF01938 TRAM domain FED53_04380 PF00919 Uncharacterized protein family UPF0004 FED53_04385 PF01165 Ribosomal protein S21 FED53_04390 PF09424 Yqey-like protein FED53_04395 PF01957 NfeD-like C-terminal, partner-binding FED53_04395 PF01972 Serine dehydrogenase proteinase FED53_04400 PF12127 SigmaW regulon antibacterial FED53_04410 PF07873 YabP family FED53_04415 PF06898 Putative stage IV sporulation protein YqfD FED53_04420 PF02562 PhoH-like protein FED53_04425 PF07698 7TM receptor with intracellular HD hydrolase FED53_04425 PF07697 7TM-HD extracellular FED53_04425 PF01966 HD domain FED53_04430 PF02130 Uncharacterized protein family UPF0054 FED53_04435 PF01219 Prokaryotic diacylglycerol kinase FED53_04440 PF07650 KH domain FED53_04440 PF01926 50S ribosome-binding GTPase FED53_04445 PF14006 YqzL-like protein FED53_04450 PF11967 Recombination protein O N terminal FED53_04450 PF02565 Recombination protein O C terminal FED53_04455 PF00571 CBS domain FED53_04455 PF08279 HTH domain FED53_04460 PF03618 Kinase/pyrophosphorylase FED53_04465 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 FED53_04470 PF08275 DNA primase catalytic core, N-terminal domain FED53_04470 PF01807 CHC2 zinc finger FED53_04470 PF10410 DnaB-helicase binding domain of primase FED53_04475 PF03979 Sigma-70 factor, region 1.1 FED53_04475 PF04545 Sigma-70, region 4 FED53_04475 PF04539 Sigma-70 region 3 FED53_04475 PF04542 Sigma-70 region 2 FED53_04475 PF00140 Sigma-70 factor, region 1.2 FED53_04480 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FED53_04480 PF02770 Acyl-CoA dehydrogenase, middle domain FED53_04480 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FED53_04485 PF13442 Cytochrome C oxidase, cbb3-type, subunit III FED53_04490 PF04816 tRNA (adenine(22)-N(1))-methyltransferase FED53_04495 PF01784 NIF3 (NGG1p interacting factor 3) FED53_04500 PF02401 LytB protein FED53_04510 PF00270 DEAD/DEAH box helicase FED53_04510 PF00271 Helicase conserved C-terminal domain FED53_04515 PF01261 Xylose isomerase-like TIM barrel FED53_04520 PF11116 Protein of unknown function (DUF2624) FED53_04525 PF00005 ABC transporter FED53_04530 PF00950 ABC 3 transport family FED53_04535 PF01475 Ferric uptake regulator family FED53_04550 PF04551 GcpE protein FED53_04560 PF07690 Major Facilitator Superfamily FED53_04575 PF01895 PhoU domain FED53_04580 PF04306 Protein of unknown function (DUF456) FED53_04610 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain FED53_04610 PF02777 Iron/manganese superoxide dismutases, C-terminal domain FED53_04615 PF07690 Major Facilitator Superfamily FED53_04625 PF12849 PBP superfamily domain FED53_04630 PF00528 Binding-protein-dependent transport system inner membrane component FED53_04635 PF00528 Binding-protein-dependent transport system inner membrane component FED53_04640 PF00005 ABC transporter FED53_04645 PF01895 PhoU domain FED53_04665 PF00534 Glycosyl transferases group 1 FED53_04665 PF13439 Glycosyltransferase Family 4 FED53_04670 PF00483 Nucleotidyl transferase FED53_04675 PF00471 Ribosomal protein L33 FED53_04680 PF01812 5-formyltetrahydrofolate cyclo-ligase family FED53_04690 PF01694 Rhomboid family FED53_04695 PF06014 Bacterial protein of unknown function (DUF910) FED53_04700 PF00480 ROK family FED53_04705 PF00884 Sulfatase FED53_04710 PF01476 LysM domain FED53_04710 PF00246 Zinc carboxypeptidase FED53_04720 PF00753 Metallo-beta-lactamase superfamily FED53_04725 PF11117 Protein of unknown function (DUF2626) FED53_04730 PF03960 ArsC family FED53_04735 PF00437 Type II/IV secretion system protein FED53_04740 PF00482 Type II secretion system (T2SS), protein F FED53_04745 PF07963 Prokaryotic N-terminal methylation motif FED53_04750 PF07963 Prokaryotic N-terminal methylation motif FED53_04775 PF14038 YqzE-like protein FED53_04780 PF11079 Bacterial protein YqhG of unknown function FED53_04785 PF00271 Helicase conserved C-terminal domain FED53_04785 PF00176 SNF2 family N-terminal domain FED53_04790 PF01571 Aminomethyltransferase folate-binding domain FED53_04790 PF08669 Glycine cleavage T-protein C-terminal barrel domain FED53_04795 PF02347 Glycine cleavage system P-protein FED53_04800 PF02347 Glycine cleavage system P-protein FED53_04805 PF00581 Rhodanese-like domain FED53_04810 PF03099 Biotin/lipoate A/B protein ligase family FED53_04815 PF00317 Ribonucleotide reductase, all-alpha domain FED53_04815 PF02867 Ribonucleotide reductase, barrel domain FED53_04815 PF03477 ATP cone domain FED53_04820 PF01325 Iron dependent repressor, N-terminal DNA binding domain FED53_04820 PF02742 Iron dependent repressor, metal binding and dimerisation domain FED53_04825 PF01734 Patatin-like phospholipase FED53_04835 PF07136 Protein of unknown function (DUF1385) FED53_04840 PF11085 Conserved membrane protein YqhR FED53_04845 PF01220 Dehydroquinase class II FED53_04850 PF01321 Creatinase/Prolidase N-terminal domain FED53_04850 PF00557 Metallopeptidase family M24 FED53_04855 PF08207 Elongation factor P (EF-P) KOW-like domain FED53_04855 PF01132 Elongation factor P (EF-P) OB domain FED53_04855 PF09285 Elongation factor P, C-terminal FED53_04860 PF10942 Protein of unknown function (DUF2619) FED53_04870 PF09548 Stage III sporulation protein AB (spore_III_AB) FED53_04875 PF06686 Stage III sporulation protein AC/AD protein family FED53_04880 PF06686 Stage III sporulation protein AC/AD protein family FED53_04885 PF09546 Stage III sporulation protein AE (spore_III_AE) FED53_04890 PF09581 Stage III sporulation protein AF (Spore_III_AF) FED53_04900 PF12685 SpoIIIAH-like protein FED53_04905 PF00364 Biotin-requiring enzyme FED53_04910 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FED53_04910 PF00289 Biotin carboxylase, N-terminal domain FED53_04910 PF02785 Biotin carboxylase C-terminal domain FED53_04915 PF03780 Asp23 family, cell envelope-related function FED53_04920 PF01029 NusB family FED53_04925 PF02601 Exonuclease VII, large subunit FED53_04925 PF13742 OB-fold nucleic acid binding domain FED53_04930 PF02609 Exonuclease VII small subunit FED53_04935 PF00348 Polyprenyl synthetase FED53_04940 PF02779 Transketolase, pyrimidine binding domain FED53_04940 PF13292 1-deoxy-D-xylulose-5-phosphate synthase FED53_04940 PF02780 Transketolase, C-terminal domain FED53_04945 PF01479 S4 domain FED53_04945 PF01728 FtsJ-like methyltransferase FED53_04950 PF02863 Arginine repressor, C-terminal domain FED53_04950 PF01316 Arginine repressor, DNA binding domain FED53_04955 PF13476 AAA domain FED53_04960 PF17820 PDZ domain FED53_04960 PF05580 SpoIVB peptidase S55 FED53_04965 PF00072 Response regulator receiver domain FED53_04965 PF08769 Sporulation initiation factor Spo0A C terminal FED53_04975 PF02652 L-lactate permease FED53_04980 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain FED53_04980 PF00056 lactate/malate dehydrogenase, NAD binding domain FED53_04985 PF14174 YycC-like protein FED53_04990 PF03009 Glycerophosphoryl diester phosphodiesterase family FED53_04995 PF11118 Protein of unknown function (DUF2627) FED53_05000 PF00989 PAS fold FED53_05000 PF00158 Sigma-54 interaction domain FED53_05000 PF02954 Bacterial regulatory protein, Fis family FED53_05005 PF01515 Phosphate acetyl/butaryl transferase FED53_05010 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain FED53_05010 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase FED53_05015 PF00871 Acetokinase family FED53_05020 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FED53_05020 PF07992 Pyridine nucleotide-disulphide oxidoreductase FED53_05025 PF00676 Dehydrogenase E1 component FED53_05030 PF02780 Transketolase, C-terminal domain FED53_05030 PF02779 Transketolase, pyrimidine binding domain FED53_05035 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FED53_05035 PF02817 e3 binding domain FED53_05035 PF00364 Biotin-requiring enzyme FED53_05045 PF01642 Methylmalonyl-CoA mutase FED53_05045 PF02310 B12 binding domain FED53_05055 PF06491 Disulphide isomerase FED53_05060 PF00497 Bacterial extracellular solute-binding proteins, family 3 FED53_05065 PF00528 Binding-protein-dependent transport system inner membrane component FED53_05070 PF00005 ABC transporter FED53_05075 PF06081 Aromatic acid exporter family member 1 FED53_05075 PF11728 Putative aromatic acid exporter C-terminal domain FED53_05080 PF03734 L,D-transpeptidase catalytic domain FED53_05090 PF01039 Carboxyl transferase domain FED53_05095 PF07687 Peptidase dimerisation domain FED53_05095 PF01546 Peptidase family M20/M25/M40 FED53_05100 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster FED53_05100 PF07992 Pyridine nucleotide-disulphide oxidoreductase FED53_05105 PF01180 Dihydroorotate dehydrogenase FED53_05110 PF01979 Amidohydrolase family FED53_05115 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin FED53_05130 PF13556 PucR C-terminal helix-turn-helix domain FED53_05130 PF07905 Purine catabolism regulatory protein-like family FED53_05130 PF17853 GGDEF-like domain FED53_05135 PF00171 Aldehyde dehydrogenase family FED53_05140 PF00202 Aminotransferase class-III FED53_05145 PF00753 Metallo-beta-lactamase superfamily FED53_05145 PF12706 Beta-lactamase superfamily domain FED53_05150 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FED53_05155 PF03807 NADP oxidoreductase coenzyme F420-dependent FED53_05155 PF14748 Pyrroline-5-carboxylate reductase dimerisation FED53_05160 PF00753 Metallo-beta-lactamase superfamily FED53_05165 PF00106 short chain dehydrogenase FED53_05180 PF01521 Iron-sulphur cluster biosynthesis FED53_05185 PF00682 HMGL-like FED53_05190 PF02803 Thiolase, C-terminal domain FED53_05190 PF00108 Thiolase, N-terminal domain FED53_05195 PF01144 Coenzyme A transferase FED53_05200 PF01144 Coenzyme A transferase FED53_05210 PF00248 Aldo/keto reductase family FED53_05215 PF13072 Mother cell inhibitor of FtsZ FED53_05220 PF00293 NUDIX domain FED53_05225 PF01944 Stage II sporulation protein M FED53_05230 PF01475 Ferric uptake regulator family FED53_05240 PF14004 Protein of unknown function (DUF4227) FED53_05245 PF00589 Phage integrase family FED53_05245 PF02899 Phage integrase, N-terminal SAM-like domain FED53_05250 PF01676 Metalloenzyme superfamily FED53_05255 PF01048 Phosphorylase superfamily FED53_05260 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain FED53_05260 PF00591 Glycosyl transferase family, a/b domain FED53_05260 PF02885 Glycosyl transferase family, helical bundle domain FED53_05265 PF00768 D-alanyl-D-alanine carboxypeptidase FED53_05265 PF07943 Penicillin-binding protein 5, C-terminal domain FED53_05270 PF01740 STAS domain FED53_05275 PF13581 Histidine kinase-like ATPase domain FED53_05280 PF04542 Sigma-70 region 2 FED53_05280 PF04545 Sigma-70, region 4 FED53_05280 PF04539 Sigma-70 region 3 FED53_05285 PF12164 Stage V sporulation protein AA FED53_05290 PF13782 Stage V sporulation protein AB FED53_05295 PF03862 SpoVAC/SpoVAEB sporulation membrane protein FED53_05300 PF07451 Stage V sporulation protein AD (SpoVAD) FED53_05305 PF03862 SpoVAC/SpoVAEB sporulation membrane protein FED53_05310 PF14097 Stage V sporulation protein AE1 FED53_05315 PF03323 Bacillus/Clostridium GerA spore germination protein FED53_05320 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain FED53_05320 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain FED53_05325 PF06207 Protein of unknown function (DUF1002) FED53_05330 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD FED53_05335 PF00583 Acetyltransferase (GNAT) family FED53_05340 PF03745 Domain of unknown function (DUF309) FED53_05350 PF02616 Segregation and condensation protein ScpA FED53_05355 PF04079 Segregation and condensation complex subunit ScpB FED53_05360 PF07943 Penicillin-binding protein 5, C-terminal domain FED53_05360 PF00768 D-alanyl-D-alanine carboxypeptidase FED53_05365 PF07670 Nucleoside recognition FED53_05370 PF07670 Nucleoside recognition FED53_05375 PF01479 S4 domain FED53_05375 PF00849 RNA pseudouridylate synthase FED53_05380 PF00578 AhpC/TSA family FED53_05385 PF05140 ResB-like family FED53_05390 PF01578 Cytochrome C assembly protein FED53_05395 PF00486 Transcriptional regulatory protein, C terminal FED53_05395 PF00072 Response regulator receiver domain FED53_05400 PF18698 Histidine kinase sensor domain FED53_05400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FED53_05400 PF00512 His Kinase A (phospho-acceptor) domain FED53_05400 PF00989 PAS fold FED53_05400 PF00672 HAMP domain FED53_05405 PF01551 Peptidase family M23 FED53_05410 PF01842 ACT domain FED53_05410 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FED53_05410 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FED53_05415 PF12822 ECF transporter, substrate-specific component FED53_05430 PF00270 DEAD/DEAH box helicase FED53_05430 PF00271 Helicase conserved C-terminal domain FED53_05435 PF10864 Protein of unknown function (DUF2663) FED53_05445 PF00149 Calcineurin-like phosphoesterase FED53_05450 PF13411 MerR HTH family regulatory protein FED53_05455 PF05389 Negative regulator of genetic competence (MecA) FED53_05460 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase FED53_05460 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain FED53_05470 PF00710 Asparaginase, N-terminal FED53_05470 PF17763 Glutaminase/Asparaginase C-terminal domain FED53_05475 PF13367 PrsW family intramembrane metalloprotease FED53_05480 PF01471 Putative peptidoglycan binding domain FED53_05480 PF07486 Cell Wall Hydrolase FED53_05485 PF03413 Peptidase propeptide and YPEB domain FED53_05485 PF14620 YpeB sporulation FED53_05495 PF02224 Cytidylate kinase FED53_05500 PF01553 Acyltransferase FED53_05505 PF00575 S1 RNA binding domain FED53_05510 PF01070 FMN-dependent dehydrogenase FED53_05515 PF07690 Major Facilitator Superfamily FED53_05520 PF14140 YpzI-like protein FED53_05530 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal FED53_05530 PF01926 50S ribosome-binding GTPase FED53_05535 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus FED53_05535 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus FED53_05555 PF09547 Stage IV sporulation protein A (spore_IV_A) FED53_05560 PF00216 Bacterial DNA-binding protein FED53_05565 PF01227 GTP cyclohydrolase I FED53_05570 PF02081 Tryptophan RNA-binding attenuator protein FED53_05575 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 FED53_05580 PF01209 ubiE/COQ5 methyltransferase family FED53_05585 PF00348 Polyprenyl synthetase FED53_05590 PF00334 Nucleoside diphosphate kinase FED53_05595 PF03705 CheR methyltransferase, all-alpha domain FED53_05595 PF01739 CheR methyltransferase, SAM binding domain FED53_05600 PF01264 Chorismate synthase FED53_05605 PF01761 3-dehydroquinate synthase FED53_05610 PF00425 chorismate binding enzyme FED53_05610 PF04715 Anthranilate synthase component I, N terminal region FED53_05615 PF00591 Glycosyl transferase family, a/b domain FED53_05615 PF02885 Glycosyl transferase family, helical bundle domain FED53_05620 PF00218 Indole-3-glycerol phosphate synthase FED53_05625 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase FED53_05630 PF00291 Pyridoxal-phosphate dependent enzyme FED53_05635 PF00290 Tryptophan synthase alpha chain FED53_05640 PF00155 Aminotransferase class I and II FED53_05645 PF01842 ACT domain FED53_05645 PF02153 Prephenate dehydrogenase FED53_05655 PF08864 UPF0302 domain FED53_05655 PF08858 IDEAL domain FED53_05665 PF00355 Rieske [2Fe-2S] domain FED53_05670 PF00033 Cytochrome b/b6/petB FED53_05675 PF13442 Cytochrome C oxidase, cbb3-type, subunit III FED53_05675 PF00032 Cytochrome b(C-terminal)/b6/petD FED53_05680 PF07187 Protein of unknown function (DUF1405) FED53_05690 PF14003 YlbE-like protein FED53_05700 PF06133 Control of competence regulator ComK, YlbF/YmcA FED53_05710 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) FED53_05725 PF01467 Cytidylyltransferase-like FED53_05730 PF07670 Nucleoside recognition FED53_05735 PF01734 Patatin-like phospholipase FED53_05740 PF13180 PDZ domain FED53_05740 PF05362 Lon protease (S16) C-terminal proteolytic domain FED53_05745 PF05636 HIGH Nucleotidyl Transferase FED53_05750 PF02620 Large ribosomal RNA subunit accumulation protein YceD FED53_05755 PF01783 Ribosomal L32p protein family FED53_05760 PF00378 Enoyl-CoA hydratase/isomerase FED53_05770 PF13508 Acetyltransferase (GNAT) domain FED53_05775 PF02785 Biotin carboxylase C-terminal domain FED53_05775 PF00289 Biotin carboxylase, N-terminal domain FED53_05775 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FED53_05780 PF00364 Biotin-requiring enzyme FED53_05785 PF01039 Carboxyl transferase domain FED53_05790 PF08546 Ketopantoate reductase PanE/ApbA C terminal FED53_05790 PF02558 Ketopantoate reductase PanE/ApbA FED53_05800 PF10079 Bacillithiol biosynthesis BshC FED53_05805 PF01795 MraW methylase family FED53_05810 PF04977 Septum formation initiator FED53_05820 PF00905 Penicillin binding protein transpeptidase domain FED53_05820 PF03717 Penicillin-binding Protein dimerisation domain FED53_05820 PF03793 PASTA domain FED53_05825 PF02875 Mur ligase family, glutamate ligase domain FED53_05825 PF08245 Mur ligase middle domain FED53_05825 PF01225 Mur ligase family, catalytic domain FED53_05830 PF00953 Glycosyl transferase family 4 FED53_05840 PF01098 Cell cycle protein FED53_05845 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain FED53_05845 PF01565 FAD binding domain FED53_05850 PF08478 POTRA domain, FtsQ-type FED53_05855 PF02491 SHS2 domain inserted in FTSA FED53_05860 PF12327 FtsZ family, C-terminal domain FED53_05860 PF00091 Tubulin/FtsZ family, GTPase domain FED53_05865 PF03419 Sporulation factor SpoIIGA FED53_05870 PF04545 Sigma-70, region 4 FED53_05870 PF04542 Sigma-70 region 2 FED53_05875 PF04539 Sigma-70 region 3 FED53_05875 PF04542 Sigma-70 region 2 FED53_05875 PF04545 Sigma-70, region 4 FED53_05880 PF05239 PRC-barrel domain FED53_05890 PF01168 Alanine racemase, N-terminal domain FED53_05895 PF04472 Cell division protein SepF FED53_05900 PF02325 YGGT family FED53_05905 PF17774 Putative RNA-binding domain in YlmH FED53_05905 PF01479 S4 domain FED53_05910 PF05103 DivIVA protein FED53_05915 PF08264 Anticodon-binding domain of tRNA FED53_05915 PF06827 Zinc finger found in FPG and IleRS FED53_05915 PF00133 tRNA synthetases class I (I, L, M and V) FED53_05925 PF01252 Signal peptidase (SPase) II FED53_05930 PF00849 RNA pseudouridylate synthase FED53_05930 PF01479 S4 domain FED53_05935 PF00156 Phosphoribosyl transferase domain FED53_05940 PF00860 Permease family FED53_05945 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FED53_05945 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FED53_05950 PF01979 Amidohydrolase family FED53_05955 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain FED53_05955 PF00117 Glutamine amidotransferase class-I FED53_05960 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FED53_05960 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain FED53_05960 PF02142 MGS-like domain FED53_05965 PF00175 Oxidoreductase NAD-binding domain FED53_05965 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B FED53_05970 PF01180 Dihydroorotate dehydrogenase FED53_05975 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family FED53_05980 PF00156 Phosphoribosyl transferase domain FED53_05990 PF00689 Cation transporting ATPase, C-terminus FED53_05990 PF00690 Cation transporter/ATPase, N-terminus FED53_05995 PF08340 Domain of unknown function (DUF1732) FED53_05995 PF03755 YicC-like family, N-terminal region FED53_06000 PF04025 Domain of unknown function (DUF370) FED53_06005 PF00625 Guanylate kinase FED53_06010 PF01192 RNA polymerase Rpb6 FED53_06015 PF04127 DNA / pantothenate metabolism flavoprotein FED53_06015 PF02441 Flavoprotein FED53_06020 PF00271 Helicase conserved C-terminal domain FED53_06020 PF17764 3′ DNA-binding domain (3′BD) FED53_06020 PF04851 Type III restriction enzyme, res subunit FED53_06020 PF18319 PriA DNA helicase Cys-rich region (CRR) domain FED53_06020 PF18074 Primosomal protein N C-terminal domain FED53_06025 PF01327 Polypeptide deformylase FED53_06030 PF02911 Formyl transferase, C-terminal domain FED53_06030 PF00551 Formyl transferase FED53_06035 PF01029 NusB family FED53_06035 PF01189 16S rRNA methyltransferase RsmB/F FED53_06040 PF04055 Radical SAM superfamily FED53_06050 PF00069 Protein kinase domain FED53_06050 PF03793 PASTA domain FED53_06055 PF16745 RsgA N-terminal domain FED53_06055 PF03193 RsgA GTPase FED53_06060 PF00834 Ribulose-phosphate 3 epimerase family FED53_06065 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain FED53_06065 PF04263 Thiamin pyrophosphokinase, catalytic domain FED53_06070 PF08183 Stage V sporulation protein family FED53_06075 PF00830 Ribosomal L28 family FED53_06080 PF03780 Asp23 family, cell envelope-related function FED53_06085 PF13684 Dihydroxyacetone kinase family FED53_06085 PF02734 DAK2 domain FED53_06095 PF03315 Serine dehydratase beta chain FED53_06095 PF01842 ACT domain FED53_06100 PF03313 Serine dehydratase alpha chain FED53_06105 PF00270 DEAD/DEAH box helicase FED53_06105 PF00271 Helicase conserved C-terminal domain FED53_06105 PF17191 RecG wedge domain FED53_06110 PF01575 MaoC like domain FED53_06110 PF08279 HTH domain FED53_06115 PF02504 Fatty acid synthesis protein FED53_06120 PF00698 Acyl transferase domain FED53_06130 PF00550 Phosphopantetheine attachment site FED53_06140 PF02463 RecF/RecN/SMC N terminal domain FED53_06140 PF06470 SMC proteins Flexible Hinge Domain FED53_06145 PF02881 SRP54-type protein, helical bundle domain FED53_06145 PF00448 SRP54-type protein, GTPase domain FED53_06150 PF04297 Putative helix-turn-helix protein, YlxM / p13 like FED53_06155 PF02881 SRP54-type protein, helical bundle domain FED53_06155 PF00448 SRP54-type protein, GTPase domain FED53_06155 PF02978 Signal peptide binding domain FED53_06160 PF00886 Ribosomal protein S16 FED53_06175 PF05239 PRC-barrel domain FED53_06175 PF01782 RimM N-terminal domain FED53_06185 PF01245 Ribosomal protein L19 FED53_06190 PF10502 Signal peptidase, peptidase S26 FED53_06195 PF01926 50S ribosome-binding GTPase FED53_06200 PF01351 Ribonuclease HII FED53_06210 PF01312 FlhB HrpN YscU SpaS Family FED53_06215 PF00549 CoA-ligase FED53_06215 PF08442 ATP-grasp domain FED53_06220 PF02629 CoA binding domain FED53_06220 PF00549 CoA-ligase FED53_06225 PF02481 DNA recombination-mediator protein A FED53_06230 PF01396 Topoisomerase DNA binding C4 zinc finger FED53_06230 PF01751 Toprim domain FED53_06230 PF01131 DNA topoisomerase FED53_06235 PF01134 Glucose inhibited division protein A FED53_06240 PF00589 Phage integrase family FED53_06240 PF02899 Phage integrase, N-terminal SAM-like domain FED53_06245 PF00227 Proteasome subunit FED53_06250 PF00004 ATPase family associated with various cellular activities (AAA) FED53_06250 PF10431 C-terminal, D2-small domain, of ClpB protein FED53_06250 PF07724 AAA domain (Cdc48 subfamily) FED53_06255 PF08222 CodY helix-turn-helix domain FED53_06255 PF06018 CodY GAF-like domain FED53_06260 PF00460 Flagella basal body rod protein FED53_06265 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FED53_06265 PF00460 Flagella basal body rod protein FED53_06270 PF02049 Flagellar hook-basal body complex protein FliE FED53_06275 PF01514 Secretory protein of YscJ/FliF family FED53_06275 PF08345 Flagellar M-ring protein C-terminal FED53_06280 PF14842 FliG N-terminal domain FED53_06280 PF14841 FliG middle domain FED53_06280 PF01706 FliG C-terminal domain FED53_06285 PF02108 Flagellar assembly protein FliH FED53_06290 PF02874 ATP synthase alpha/beta family, beta-barrel domain FED53_06290 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FED53_06290 PF18269 T3SS EscN ATPase C-terminal domain FED53_06295 PF02050 Flagellar FliJ protein FED53_06310 PF03963 Flagellar hook capping protein - N-terminal region FED53_06315 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FED53_06315 PF00460 Flagella basal body rod protein FED53_06320 PF06289 Flagellar and Swarming motility proteins FED53_06325 PF03748 Flagellar basal body-associated protein FliL FED53_06330 PF02154 Flagellar motor switch protein FliM FED53_06330 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term FED53_06335 PF04509 CheC-like family FED53_06335 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term FED53_06340 PF00072 Response regulator receiver domain FED53_06345 PF04347 Flagellar biosynthesis protein, FliO FED53_06350 PF00813 FliP family FED53_06355 PF01313 Bacterial export proteins, family 3 FED53_06360 PF01311 Bacterial export proteins, family 1 FED53_06365 PF01312 FlhB HrpN YscU SpaS Family FED53_06370 PF00771 FHIPEP family FED53_06375 PF00448 SRP54-type protein, GTPase domain FED53_06380 PF10609 NUBPL iron-transfer P-loop NTPase FED53_06385 PF00072 Response regulator receiver domain FED53_06385 PF01339 CheB methylesterase FED53_06390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FED53_06390 PF01627 Hpt domain FED53_06390 PF07194 P2 response regulator binding domain FED53_06390 PF01584 CheW-like domain FED53_06390 PF02895 Signal transducing histidine kinase, homodimeric domain FED53_06395 PF01584 CheW-like domain FED53_06400 PF04509 CheC-like family FED53_06405 PF03975 CheD chemotactic sensory transduction FED53_06410 PF04545 Sigma-70, region 4 FED53_06410 PF04539 Sigma-70 region 3 FED53_06410 PF04542 Sigma-70 region 2 FED53_06420 PF00318 Ribosomal protein S2 FED53_06425 PF00889 Elongation factor TS FED53_06430 PF00696 Amino acid kinase family FED53_06435 PF01765 Ribosome recycling factor FED53_06440 PF01255 Putative undecaprenyl diphosphate synthase FED53_06450 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain FED53_06450 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase FED53_06450 PF13288 DXP reductoisomerase C-terminal domain FED53_06455 PF02163 Peptidase family M50 FED53_06455 PF13180 PDZ domain FED53_06460 PF03129 Anticodon binding domain FED53_06460 PF04073 Aminoacyl-tRNA editing domain FED53_06460 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FED53_06465 PF07733 Bacterial DNA polymerase III alpha NTPase domain FED53_06465 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FED53_06465 PF14579 Helix-hairpin-helix motif FED53_06465 PF11490 DNA polymerase III polC-type N-terminus II FED53_06465 PF00929 Exonuclease FED53_06465 PF02811 PHP domain FED53_06465 PF14480 DNA polymerase III polC-type N-terminus I FED53_06475 PF01348 Type II intron maturase FED53_06475 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) FED53_06490 PF17384 RimP C-terminal SH3 domain FED53_06490 PF02576 RimP N-terminal domain FED53_06495 PF13184 NusA-like KH domain FED53_06495 PF08529 NusA N-terminal domain FED53_06495 PF00575 S1 RNA binding domain FED53_06500 PF04296 Protein of unknown function (DUF448) FED53_06505 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family FED53_06510 PF11987 Translation-initiation factor 2 FED53_06510 PF04760 Translation initiation factor IF-2, N-terminal region FED53_06510 PF00009 Elongation factor Tu GTP binding domain FED53_06515 PF04456 Protein of unknown function (DUF503) FED53_06520 PF02033 Ribosome-binding factor A FED53_06525 PF16198 tRNA pseudouridylate synthase B C-terminal domain FED53_06525 PF01509 TruB family pseudouridylate synthase (N terminal domain) FED53_06530 PF01687 Riboflavin kinase FED53_06530 PF06574 FAD synthetase FED53_06535 PF00312 Ribosomal protein S15 FED53_06540 PF03725 3' exoribonuclease family, domain 2 FED53_06540 PF00013 KH domain FED53_06540 PF01138 3' exoribonuclease family, domain 1 FED53_06540 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain FED53_06540 PF00575 S1 RNA binding domain FED53_06545 PF01522 Polysaccharide deacetylase FED53_06550 PF00675 Insulinase (Peptidase family M16) FED53_06550 PF05193 Peptidase M16 inactive domain FED53_06555 PF05239 PRC-barrel domain FED53_06560 PF16924 Dipicolinate synthase subunit A N-terminal domain FED53_06560 PF01262 Alanine dehydrogenase/PNT, C-terminal domain FED53_06565 PF02441 Flavoprotein FED53_06570 PF02774 Semialdehyde dehydrogenase, dimerisation domain FED53_06570 PF01118 Semialdehyde dehydrogenase, NAD binding domain FED53_06575 PF13840 ACT domain FED53_06575 PF00696 Amino acid kinase family FED53_06580 PF00701 Dihydrodipicolinate synthetase family FED53_06585 PF17770 Ribonuclease J C-terminal domain FED53_06585 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain FED53_06585 PF00753 Metallo-beta-lactamase superfamily FED53_06590 PF00574 Clp protease FED53_06595 PF14035 YlzJ-like protein FED53_06600 PF01580 FtsK/SpoIIIE family FED53_06600 PF09397 Ftsk gamma domain FED53_06600 PF17854 FtsK alpha domain FED53_06605 PF07702 UTRA domain FED53_06605 PF00392 Bacterial regulatory proteins, gntR family FED53_06610 PF02608 ABC transporter substrate-binding protein PnrA-like FED53_06630 PF05193 Peptidase M16 inactive domain FED53_06635 PF00675 Insulinase (Peptidase family M16) FED53_06635 PF05193 Peptidase M16 inactive domain FED53_06645 PF11588 Protein of unknown function (DUF3243) FED53_06650 PF11868 Protein of unknown function (DUF3388) FED53_06655 PF13464 Domain of unknown function (DUF4115) FED53_06660 PF01066 CDP-alcohol phosphatidyltransferase FED53_06665 PF18146 Damage-inducible protein CinA KH domain FED53_06665 PF00994 Probable molybdopterin binding domain FED53_06665 PF02464 Competence-damaged protein FED53_06670 PF00154 recA bacterial DNA recombination protein FED53_06675 PF00013 KH domain FED53_06675 PF12072 Domain of unknown function (DUF3552) FED53_06675 PF01966 HD domain FED53_06680 PF13277 YmdB-like protein FED53_06685 PF04232 Stage V sporulation protein S (SpoVS) FED53_06695 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase FED53_06695 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II FED53_06695 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg FED53_06700 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FED53_06705 PF00107 Zinc-binding dehydrogenase FED53_06705 PF08240 Alcohol dehydrogenase GroES-like domain FED53_06710 PF00155 Aminotransferase class I and II FED53_06715 PF00919 Uncharacterized protein family UPF0004 FED53_06715 PF04055 Radical SAM superfamily FED53_06715 PF01938 TRAM domain FED53_06720 PF06133 Control of competence regulator ComK, YlbF/YmcA FED53_06725 PF10628 Outer spore coat protein E (CotE) FED53_06730 PF05188 MutS domain II FED53_06730 PF05190 MutS family domain IV FED53_06730 PF05192 MutS domain III FED53_06730 PF01624 MutS domain I FED53_06730 PF00488 MutS domain V FED53_06735 PF01119 DNA mismatch repair protein, C-terminal domain FED53_06735 PF08676 MutL C terminal dimerisation domain FED53_06750 PF17209 Hfq protein FED53_06755 PF17866 AAA lid domain FED53_06755 PF00004 ATPase family associated with various cellular activities (AAA) FED53_06760 PF03458 UPF0126 domain FED53_06765 PF16360 GTP-binding GTPase Middle Region FED53_06765 PF13167 GTP-binding GTPase N-terminal FED53_06765 PF01926 50S ribosome-binding GTPase FED53_06770 PF06838 Methionine gamma-lyase FED53_06775 PF13411 MerR HTH family regulatory protein FED53_06780 PF03951 Glutamine synthetase, beta-Grasp domain FED53_06780 PF00120 Glutamine synthetase, catalytic domain FED53_06785 PF00589 Phage integrase family FED53_06785 PF02899 Phage integrase, N-terminal SAM-like domain FED53_06790 PF06114 IrrE N-terminal-like domain FED53_06810 PF01381 Helix-turn-helix FED53_06900 PF00589 Phage integrase family FED53_07000 PF01609 Transposase DDE domain FED53_07010 PF10779 Haemolysin XhlA FED53_07020 PF01510 N-acetylmuramoyl-L-alanine amidase FED53_07020 PF01476 LysM domain FED53_07020 PF01471 Putative peptidoglycan binding domain FED53_07050 PF01580 FtsK/SpoIIIE family FED53_07050 PF09397 Ftsk gamma domain FED53_07050 PF17854 FtsK alpha domain FED53_07050 PF13491 4TM region of DNA translocase FtsK/SpoIIIE FED53_07070 PF11553 Protein of unknown function (DUF3231) FED53_07080 PF13520 Amino acid permease FED53_07085 PF01047 MarR family FED53_07090 PF00583 Acetyltransferase (GNAT) family FED53_07095 PF04299 Putative FMN-binding domain FED53_07110 PF01966 HD domain FED53_07115 PF07883 Cupin domain FED53_07120 PF07690 Major Facilitator Superfamily FED53_07130 PF03845 Spore germination protein FED53_07145 PF00916 Sulfate permease family FED53_07145 PF00916 Sulfate permease family FED53_07145 PF01740 STAS domain FED53_07145 PF01740 STAS domain FED53_07180 PF01510 N-acetylmuramoyl-L-alanine amidase FED53_07180 PF01471 Putative peptidoglycan binding domain FED53_07190 PF00717 Peptidase S24-like FED53_07190 PF01726 LexA DNA binding domain FED53_07195 PF01476 LysM domain FED53_07200 PF00239 Resolvase, N terminal domain FED53_07205 PF05979 Bacterial protein of unknown function (DUF896) FED53_07210 PF02779 Transketolase, pyrimidine binding domain FED53_07210 PF02780 Transketolase, C-terminal domain FED53_07210 PF00456 Transketolase, thiamine diphosphate binding domain FED53_07215 PF10747 Sporulation inhibitor of replication protein SirA FED53_07220 PF03672 Uncharacterised protein family (UPF0154) FED53_07225 PF00005 ABC transporter FED53_07225 PF00664 ABC transporter transmembrane region FED53_07230 PF00664 ABC transporter transmembrane region FED53_07230 PF00005 ABC transporter FED53_07235 PF09388 Spo0E like sporulation regulatory protein FED53_07240 PF02683 Cytochrome C biogenesis protein transmembrane region FED53_07245 PF00072 Response regulator receiver domain FED53_07250 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) FED53_07255 PF07301 Protein of unknown function (DUF1453) FED53_07260 PF11084 Protein of unknown function (DUF2621) FED53_07265 PF00202 Aminotransferase class-III FED53_07270 PF00158 Sigma-54 interaction domain FED53_07275 PF13520 Amino acid permease FED53_07280 PF00171 Aldehyde dehydrogenase family FED53_07285 PF02554 Carbon starvation protein CstA FED53_07300 PF13426 PAS domain FED53_07300 PF00512 His Kinase A (phospho-acceptor) domain FED53_07300 PF00989 PAS fold FED53_07300 PF13188 PAS domain FED53_07300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FED53_07315 PF03932 CutC family FED53_07320 PF00202 Aminotransferase class-III FED53_07325 PF00282 Pyridoxal-dependent decarboxylase conserved domain FED53_07330 PF06276 Ferric iron reductase FhuF-like transporter FED53_07330 PF04183 IucA / IucC family FED53_07340 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) FED53_07350 PF06276 Ferric iron reductase FhuF-like transporter FED53_07350 PF04183 IucA / IucC family FED53_07355 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FED53_07355 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FED53_07360 PF01842 ACT domain FED53_07360 PF00551 Formyl transferase FED53_07365 PF00303 Thymidylate synthase FED53_07370 PF00186 Dihydrofolate reductase FED53_07375 PF01553 Acyltransferase FED53_07385 PF00291 Pyridoxal-phosphate dependent enzyme FED53_07385 PF00585 C-terminal regulatory domain of Threonine dehydratase FED53_07390 PF10751 Protein of unknown function (DUF2535) FED53_07395 PF02645 Uncharacterised protein, DegV family COG1307 FED53_07400 PF13426 PAS domain FED53_07400 PF00989 PAS fold FED53_07400 PF13188 PAS domain FED53_07400 PF00512 His Kinase A (phospho-acceptor) domain FED53_07400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FED53_07405 PF02630 SCO1/SenC FED53_07410 PF13472 GDSL-like Lipase/Acylhydrolase family FED53_07435 PF00512 His Kinase A (phospho-acceptor) domain FED53_07435 PF00989 PAS fold FED53_07435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FED53_07435 PF08447 PAS fold FED53_07445 PF02687 FtsX-like permease family FED53_07450 PF00005 ABC transporter FED53_07455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FED53_07460 PF00072 Response regulator receiver domain FED53_07460 PF00486 Transcriptional regulatory protein, C terminal FED53_07465 PF00375 Sodium:dicarboxylate symporter family FED53_07470 PF00202 Aminotransferase class-III FED53_07475 PF01144 Coenzyme A transferase FED53_07480 PF01144 Coenzyme A transferase FED53_07485 PF01546 Peptidase family M20/M25/M40 FED53_07485 PF07687 Peptidase dimerisation domain FED53_07495 PF12544 Lysine-2,3-aminomutase FED53_07500 PF14122 YokU-like protein, putative antitoxin FED53_07505 PF01063 Amino-transferase class IV FED53_07510 PF01757 Acyltransferase family FED53_07515 PF06855 YozE SAM-like fold FED53_07525 PF14162 YozD-like protein FED53_07540 PF00069 Protein kinase domain FED53_07545 PF07070 SpoOM protein FED53_07550 PF01569 PAP2 superfamily FED53_07555 PF14191 YodL-like FED53_07560 PF01048 Phosphorylase superfamily FED53_07565 PF00916 Sulfate permease family FED53_07565 PF01740 STAS domain FED53_07575 PF01098 Cell cycle protein FED53_07590 PF02525 Flavodoxin-like fold FED53_07595 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 FED53_07600 PF03123 CAT RNA binding domain FED53_07600 PF00874 PRD domain FED53_07605 PF00367 phosphotransferase system, EIIB FED53_07605 PF02378 Phosphotransferase system, EIIC FED53_07610 PF00294 pfkB family carbohydrate kinase FED53_07630 PF00583 Acetyltransferase (GNAT) family FED53_07635 PF00005 ABC transporter FED53_07645 PF03009 Glycerophosphoryl diester phosphodiesterase family FED53_07695 PF01894 Uncharacterised protein family UPF0047 FED53_07700 PF00877 NlpC/P60 family FED53_07700 PF01476 LysM domain FED53_07705 PF00365 Phosphofructokinase FED53_07710 PF00582 Universal stress protein family FED53_07715 PF02146 Sir2 family FED53_07725 PF01717 Cobalamin-independent synthase, Catalytic domain FED53_07730 PF03471 Transporter associated domain FED53_07730 PF01595 Cyclin M transmembrane N-terminal domain FED53_07730 PF00571 CBS domain FED53_07735 PF00188 Cysteine-rich secretory protein family FED53_07740 PF00924 Mechanosensitive ion channel FED53_07745 PF04239 Protein of unknown function (DUF421) FED53_07750 PF01810 LysE type translocator FED53_07755 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FED53_07765 PF03060 Nitronate monooxygenase FED53_07770 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FED53_07770 PF00512 His Kinase A (phospho-acceptor) domain FED53_07775 PF00356 Bacterial regulatory proteins, lacI family FED53_07790 PF00528 Binding-protein-dependent transport system inner membrane component FED53_07795 PF00528 Binding-protein-dependent transport system inner membrane component FED53_07800 PF01380 SIS domain FED53_07805 PF01418 Helix-turn-helix domain, rpiR family FED53_07805 PF01380 SIS domain FED53_07820 PF07075 Protein of unknown function (DUF1343) FED53_07825 PF01915 Glycosyl hydrolase family 3 C-terminal domain FED53_07825 PF00933 Glycosyl hydrolase family 3 N terminal domain FED53_07830 PF00440 Bacterial regulatory proteins, tetR family FED53_07835 PF07690 Major Facilitator Superfamily FED53_07840 PF13302 Acetyltransferase (GNAT) domain FED53_07845 PF00355 Rieske [2Fe-2S] domain FED53_07855 PF00571 CBS domain FED53_07855 PF00005 ABC transporter FED53_07860 PF00528 Binding-protein-dependent transport system inner membrane component FED53_07870 PF03816 Cell envelope-related transcriptional attenuator domain FED53_07880 PF01321 Creatinase/Prolidase N-terminal domain FED53_07880 PF00557 Metallopeptidase family M24 FED53_07885 PF02535 ZIP Zinc transporter FED53_07905 PF13411 MerR HTH family regulatory protein FED53_07905 PF07739 TipAS antibiotic-recognition domain FED53_07910 PF03061 Thioesterase superfamily FED53_07915 PF04122 Putative cell wall binding repeat 2 FED53_07915 PF08486 Stage II sporulation protein FED53_07920 PF00672 HAMP domain FED53_07920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FED53_07920 PF00512 His Kinase A (phospho-acceptor) domain FED53_07925 PF00072 Response regulator receiver domain FED53_07925 PF00486 Transcriptional regulatory protein, C terminal FED53_07930 PF13180 PDZ domain FED53_07940 PF01037 Lrp/AsnC ligand binding domain FED53_07945 PF02254 TrkA-N domain FED53_07945 PF02080 TrkA-C domain FED53_07950 PF02386 Cation transport protein FED53_07955 PF00082 Subtilase family FED53_07960 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FED53_07965 PF01476 LysM domain FED53_07965 PF00877 NlpC/P60 family FED53_07980 PF00535 Glycosyl transferase family 2 FED53_07985 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain FED53_07985 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain FED53_07985 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain FED53_07990 PF00535 Glycosyl transferase family 2 FED53_07995 PF07681 DoxX FED53_08010 PF12732 YtxH-like protein FED53_08015 PF00251 Glycosyl hydrolases family 32 N-terminal domain FED53_08015 PF08244 Glycosyl hydrolases family 32 C terminal FED53_08020 PF02566 OsmC-like protein FED53_08035 PF00583 Acetyltransferase (GNAT) family FED53_08040 PF07690 Major Facilitator Superfamily FED53_08050 PF05908 Poly-gamma-glutamate hydrolase FED53_08055 PF00440 Bacterial regulatory proteins, tetR family FED53_08055 PF13977 BetI-type transcriptional repressor, C-terminal FED53_08065 PF03741 Integral membrane protein TerC family FED53_08070 PF01757 Acyltransferase family FED53_08075 PF00082 Subtilase family FED53_08090 PF00686 Starch binding domain FED53_08090 PF01373 Glycosyl hydrolase family 14 FED53_08100 PF00528 Binding-protein-dependent transport system inner membrane component FED53_08105 PF00528 Binding-protein-dependent transport system inner membrane component FED53_08115 PF02583 Metal-sensitive transcriptional repressor FED53_08120 PF00403 Heavy-metal-associated domain FED53_08125 PF00403 Heavy-metal-associated domain FED53_08130 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FED53_08140 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FED53_08140 PF13378 Enolase C-terminal domain-like FED53_08175 PF13302 Acetyltransferase (GNAT) domain FED53_08180 PF02824 TGS domain FED53_08180 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FED53_08180 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FED53_08180 PF03129 Anticodon binding domain FED53_08195 PF09587 Bacterial capsule synthesis protein PGA_cap FED53_08200 PF08713 DNA alkylation repair enzyme FED53_08205 PF00849 RNA pseudouridylate synthase FED53_08205 PF01479 S4 domain FED53_08210 PF14139 YpzG-like protein FED53_08215 PF14151 YfhD-like protein FED53_08220 PF01032 FecCD transport family FED53_08225 PF01032 FecCD transport family FED53_08230 PF01497 Periplasmic binding protein FED53_08235 PF00005 ABC transporter FED53_08245 PF01053 Cys/Met metabolism PLP-dependent enzyme FED53_08250 PF05525 Branched-chain amino acid transport protein FED53_08260 PF03806 AbgT putative transporter family FED53_08270 PF01022 Bacterial regulatory protein, arsR family FED53_08285 PF00571 CBS domain FED53_08285 PF01595 Cyclin M transmembrane N-terminal domain FED53_08285 PF03471 Transporter associated domain FED53_08300 PF00557 Metallopeptidase family M24 FED53_08310 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FED53_08315 PF07690 Major Facilitator Superfamily FED53_08320 PF00144 Beta-lactamase FED53_08330 PF16875 Glycosyl hydrolase family 36 N-terminal domain FED53_08330 PF16874 Glycosyl hydrolase family 36 C-terminal domain FED53_08335 PF07690 Major Facilitator Superfamily FED53_08345 PF00667 FAD binding domain FED53_08345 PF00258 Flavodoxin FED53_08345 PF00175 Oxidoreductase NAD-binding domain FED53_08350 PF01077 Nitrite and sulphite reductase 4Fe-4S domain FED53_08350 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain FED53_08355 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FED53_08365 PF00989 PAS fold FED53_08365 PF01627 Hpt domain FED53_08365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FED53_08365 PF18415 Histidine kinase receptor ArcB trans-membrane domain FED53_08365 PF00072 Response regulator receiver domain FED53_08365 PF00512 His Kinase A (phospho-acceptor) domain FED53_08370 PF01739 CheR methyltransferase, SAM binding domain FED53_08370 PF03705 CheR methyltransferase, all-alpha domain FED53_08375 PF13426 PAS domain FED53_08375 PF07228 Stage II sporulation protein E (SpoIIE) FED53_08385 PF00356 Bacterial regulatory proteins, lacI family FED53_08390 PF01306 LacY proton/sugar symporter FED53_08395 PF00251 Glycosyl hydrolases family 32 N-terminal domain FED53_08395 PF08244 Glycosyl hydrolases family 32 C terminal FED53_08415 PF01323 DSBA-like thioredoxin domain FED53_08440 PF14667 Polysaccharide biosynthesis C-terminal domain FED53_08440 PF01943 Polysaccharide biosynthesis protein FED53_08445 PF01609 Transposase DDE domain FED53_08470 PF00356 Bacterial regulatory proteins, lacI family FED53_08475 PF00171 Aldehyde dehydrogenase family FED53_08480 PF00465 Iron-containing alcohol dehydrogenase FED53_08485 PF00753 Metallo-beta-lactamase superfamily FED53_08520 PF00561 alpha/beta hydrolase fold FED53_08530 PF13610 DDE domain FED53_08540 PF13305 Tetracyclin repressor-like, C-terminal domain FED53_08540 PF00440 Bacterial regulatory proteins, tetR family FED53_08545 PF00753 Metallo-beta-lactamase superfamily FED53_08555 PF01047 MarR family FED53_08560 PF00579 tRNA synthetases class I (W and Y) FED53_08560 PF01479 S4 domain FED53_08580 PF00106 short chain dehydrogenase FED53_08585 PF00465 Iron-containing alcohol dehydrogenase FED53_08600 PF00311 Phosphoenolpyruvate carboxylase FED53_08605 PF00248 Aldo/keto reductase family FED53_08610 PF00291 Pyridoxal-phosphate dependent enzyme FED53_08615 PF02875 Mur ligase family, glutamate ligase domain FED53_08615 PF08245 Mur ligase middle domain FED53_08615 PF01225 Mur ligase family, catalytic domain FED53_08620 PF01609 Transposase DDE domain FED53_08625 PF07729 FCD domain FED53_08625 PF00392 Bacterial regulatory proteins, gntR family FED53_08630 PF07977 FabA-like domain FED53_08650 PF00313 'Cold-shock' DNA-binding domain FED53_08655 PF00009 Elongation factor Tu GTP binding domain FED53_08655 PF16658 Class II release factor RF3, C-terminal domain FED53_08655 PF03144 Elongation factor Tu domain 2 FED53_08660 PF00893 Small Multidrug Resistance protein FED53_08685 PF02694 Uncharacterised BCR, YnfA/UPF0060 family FED53_08690 PF09855 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) FED53_08705 PF00583 Acetyltransferase (GNAT) family FED53_08715 PF03180 NLPA lipoprotein FED53_08720 PF00005 ABC transporter FED53_08720 PF09383 NIL domain FED53_08725 PF00528 Binding-protein-dependent transport system inner membrane component FED53_08730 PF00056 lactate/malate dehydrogenase, NAD binding domain FED53_08730 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain FED53_08760 PF13462 Thioredoxin FED53_08765 PF02600 Disulfide bond formation protein DsbB FED53_08820 PF04607 Region found in RelA / SpoT proteins FED53_08830 PF13302 Acetyltransferase (GNAT) domain FED53_08835 PF01925 Sulfite exporter TauE/SafE FED53_08840 PF04203 Sortase domain FED53_08850 PF14166 YueH-like protein FED53_08855 PF02537 CrcB-like protein, Camphor Resistance (CrcB) FED53_08860 PF02537 CrcB-like protein, Camphor Resistance (CrcB) FED53_08870 PF02583 Metal-sensitive transcriptional repressor FED53_08880 PF02790 Cytochrome C oxidase subunit II, transmembrane domain FED53_08885 PF00115 Cytochrome C and Quinol oxidase polypeptide I FED53_08890 PF00510 Cytochrome c oxidase subunit III FED53_08895 PF03626 Prokaryotic Cytochrome C oxidase subunit IV FED53_08905 PF02673 Bacitracin resistance protein BacA FED53_08920 PF13302 Acetyltransferase (GNAT) domain FED53_08925 PF03816 Cell envelope-related transcriptional attenuator domain FED53_08945 PF12823 Domain of unknown function (DUF3817) FED53_08955 PF00873 AcrB/AcrD/AcrF family FED53_08960 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FED53_08985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FED53_08985 PF03466 LysR substrate binding domain FED53_08990 PF00285 Citrate synthase, C-terminal domain FED53_08995 PF03601 Conserved hypothetical protein 698 FED53_09005 PF00781 Diacylglycerol kinase catalytic domain FED53_09025 PF02277 Phosphoribosyltransferase FED53_09040 PF05163 DinB family FED53_09045 PF00209 Sodium:neurotransmitter symporter family FED53_09050 PF18277 AbrB C-terminal domain FED53_09050 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin FED53_09055 PF00253 Ribosomal protein S14p/S29e FED53_09065 PF08239 Bacterial SH3 domain FED53_09065 PF01520 N-acetylmuramoyl-L-alanine amidase FED53_09090 PF01022 Bacterial regulatory protein, arsR family FED53_09100 PF03033 Glycosyltransferase family 28 N-terminal domain FED53_09100 PF04101 Glycosyltransferase family 28 C-terminal domain FED53_09110 PF10502 Signal peptidase, peptidase S26 FED53_09115 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FED53_09160 PF00209 Sodium:neurotransmitter symporter family FED53_09170 PF00199 Catalase FED53_09170 PF06628 Catalase-related immune-responsive FED53_09175 PF00877 NlpC/P60 family FED53_09175 PF01476 LysM domain FED53_09180 PF01910 Thiamine-binding protein FED53_09185 PF13556 PucR C-terminal helix-turn-helix domain FED53_09185 PF07905 Purine catabolism regulatory protein-like family FED53_09185 PF17853 GGDEF-like domain FED53_09195 PF01546 Peptidase family M20/M25/M40 FED53_09200 PF00266 Aminotransferase class-V FED53_09210 PF02417 Chromate transporter FED53_09215 PF02417 Chromate transporter FED53_09220 PF01817 Chorismate mutase type II FED53_09220 PF00793 DAHP synthetase I family FED53_09225 PF01264 Chorismate synthase FED53_09230 PF02153 Prephenate dehydrogenase FED53_09230 PF01842 ACT domain FED53_09235 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FED53_09245 PF00355 Rieske [2Fe-2S] domain FED53_09245 PF01266 FAD dependent oxidoreductase FED53_09250 PF10503 Esterase PHB depolymerase FED53_09255 PF09680 Family of unknown function FED53_09260 PF00478 IMP dehydrogenase / GMP reductase domain FED53_09260 PF00571 CBS domain FED53_09270 PF03551 Transcriptional regulator PadR-like family FED53_09275 PF02417 Chromate transporter FED53_09285 PF00571 CBS domain FED53_09285 PF03471 Transporter associated domain FED53_09285 PF01595 Cyclin M transmembrane N-terminal domain FED53_09290 PF09234 Domain of unknown function (DUF1963) FED53_09295 PF07875 Coat F domain FED53_09305 PF00210 Ferritin-like domain FED53_09340 PF00005 ABC transporter FED53_09340 PF00664 ABC transporter transmembrane region FED53_09350 PF13115 YtkA-like FED53_09355 PF16736 Single Cache-like FED53_09355 PF00989 PAS fold FED53_09355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FED53_09355 PF00512 His Kinase A (phospho-acceptor) domain FED53_09360 PF00486 Transcriptional regulatory protein, C terminal FED53_09360 PF00072 Response regulator receiver domain FED53_09365 PF02649 Type I GTP cyclohydrolase folE2 FED53_09370 PF01943 Polysaccharide biosynthesis protein FED53_09375 PF00905 Penicillin binding protein transpeptidase domain FED53_09375 PF00912 Transglycosylase FED53_09380 PF01738 Dienelactone hydrolase family FED53_09385 PF01522 Polysaccharide deacetylase FED53_09395 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase FED53_09400 PF00881 Nitroreductase family FED53_09405 PF06725 3D domain FED53_09405 PF01476 LysM domain FED53_09415 PF02653 Branched-chain amino acid transport system / permease component FED53_09425 PF00005 ABC transporter FED53_09430 PF00005 ABC transporter FED53_09435 PF00547 Urease, gamma subunit FED53_09440 PF00699 Urease beta subunit FED53_09445 PF01979 Amidohydrolase family FED53_09445 PF00449 Urease alpha-subunit, N-terminal domain FED53_09450 PF05194 UreE urease accessory protein, C-terminal domain FED53_09450 PF02814 UreE urease accessory protein, N-terminal domain FED53_09455 PF01730 UreF FED53_09460 PF02492 CobW/HypB/UreG, nucleotide-binding domain FED53_09465 PF01774 UreD urease accessory protein FED53_09485 PF00375 Sodium:dicarboxylate symporter family FED53_09500 PF01717 Cobalamin-independent synthase, Catalytic domain FED53_09500 PF08267 Cobalamin-independent synthase, N-terminal domain FED53_09505 PF01638 HxlR-like helix-turn-helix FED53_09520 PF00474 Sodium:solute symporter family FED53_09525 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FED53_09525 PF07685 CobB/CobQ-like glutamine amidotransferase domain FED53_09530 PF01032 FecCD transport family FED53_09535 PF00005 ABC transporter FED53_09545 PF08028 Acyl-CoA dehydrogenase, C-terminal domain FED53_09545 PF02770 Acyl-CoA dehydrogenase, middle domain FED53_09545 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FED53_09560 PF00535 Glycosyl transferase family 2 FED53_09565 PF02350 UDP-N-acetylglucosamine 2-epimerase FED53_09570 PF02719 Polysaccharide biosynthesis protein FED53_09580 PF16363 GDP-mannose 4,6 dehydratase FED53_09585 PF13416 Bacterial extracellular solute-binding protein FED53_09590 PF00528 Binding-protein-dependent transport system inner membrane component FED53_09595 PF00528 Binding-protein-dependent transport system inner membrane component FED53_09610 PF00534 Glycosyl transferases group 1 FED53_09610 PF00862 Sucrose synthase FED53_09615 PF00535 Glycosyl transferase family 2 FED53_09625 PF03372 Endonuclease/Exonuclease/phosphatase family FED53_09630 PF04229 GrpB protein FED53_09630 PF13673 Acetyltransferase (GNAT) domain FED53_09670 PF04235 Protein of unknown function (DUF418) FED53_09680 PF02566 OsmC-like protein FED53_09685 PF00676 Dehydrogenase E1 component FED53_09685 PF16870 2-oxoglutarate dehydrogenase C-terminal FED53_09685 PF16078 2-oxoglutarate dehydrogenase N-terminus FED53_09685 PF02779 Transketolase, pyrimidine binding domain FED53_09690 PF00364 Biotin-requiring enzyme FED53_09690 PF02817 e3 binding domain FED53_09690 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FED53_09695 PF12146 Serine aminopeptidase, S33 FED53_09710 PF05360 yiaA/B two helix domain FED53_09720 PF00375 Sodium:dicarboxylate symporter family FED53_09740 PF04198 Putative sugar-binding domain FED53_09745 PF02885 Glycosyl transferase family, helical bundle domain FED53_09745 PF00591 Glycosyl transferase family, a/b domain FED53_09745 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain FED53_09750 PF01791 DeoC/LacD family aldolase FED53_09755 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FED53_09760 PF01773 Na+ dependent nucleoside transporter N-terminus FED53_09760 PF07662 Na+ dependent nucleoside transporter C-terminus FED53_09765 PF02293 AmiS/UreI family transporter FED53_09770 PF02073 Thermophilic metalloprotease (M29) FED53_09810 PF05525 Branched-chain amino acid transport protein FED53_09820 PF00565 Staphylococcal nuclease homologue FED53_09825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FED53_09825 PF00512 His Kinase A (phospho-acceptor) domain FED53_09825 PF09308 LuxQ, periplasmic FED53_09825 PF00072 Response regulator receiver domain FED53_09830 PF00072 Response regulator receiver domain FED53_09830 PF04397 LytTr DNA-binding domain FED53_09835 PF00356 Bacterial regulatory proteins, lacI family FED53_09840 PF01261 Xylose isomerase-like TIM barrel FED53_09845 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FED53_09845 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FED53_09850 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FED53_09850 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FED53_09855 PF01261 Xylose isomerase-like TIM barrel FED53_09860 PF07690 Major Facilitator Superfamily FED53_09870 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family FED53_09875 PF00465 Iron-containing alcohol dehydrogenase FED53_09885 PF00248 Aldo/keto reductase family FED53_09900 PF00085 Thioredoxin FED53_09920 PF03744 6-carboxyhexanoate--CoA ligase FED53_09920 PF00155 Aminotransferase class I and II FED53_09930 PF00202 Aminotransferase class-III FED53_09935 PF01699 Sodium/calcium exchanger protein FED53_09945 PF00753 Metallo-beta-lactamase superfamily FED53_09945 PF16123 Hydroxyacylglutathione hydrolase C-terminus FED53_09955 PF00528 Binding-protein-dependent transport system inner membrane component FED53_09960 PF00528 Binding-protein-dependent transport system inner membrane component FED53_09965 PF00005 ABC transporter FED53_09970 PF00005 ABC transporter FED53_09970 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FED53_09980 PF01381 Helix-turn-helix FED53_09980 PF07883 Cupin domain FED53_09995 PF01810 LysE type translocator FED53_10000 PF16916 Dimerisation domain of Zinc Transporter FED53_10000 PF01545 Cation efflux family FED53_10035 PF00881 Nitroreductase family FED53_10040 PF00892 EamA-like transporter family FED53_10045 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FED53_10055 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin FED53_10080 PF11975 Family 4 glycosyl hydrolase C-terminal domain FED53_10080 PF02056 Family 4 glycosyl hydrolase FED53_10085 PF00480 ROK family FED53_10095 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FED53_10095 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FED53_10100 PF00083 Sugar (and other) transporter FED53_10110 PF04143 Sulphur transport FED53_10120 PF07690 Major Facilitator Superfamily FED53_10155 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FED53_10200 PF00291 Pyridoxal-phosphate dependent enzyme FED53_10205 PF04463 Protein of unknown function (DUF523) FED53_10210 PF07690 Major Facilitator Superfamily FED53_10215 PF03466 LysR substrate binding domain FED53_10215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FED53_10230 PF00892 EamA-like transporter family FED53_10235 PF12833 Helix-turn-helix domain FED53_10235 PF02311 AraC-like ligand binding domain FED53_10330 PF00145 C-5 cytosine-specific DNA methylase FED53_10340 PF00488 MutS domain V FED53_10340 PF01713 Smr domain FED53_10355 PF00367 phosphotransferase system, EIIB FED53_10355 PF02378 Phosphotransferase system, EIIC FED53_10385 PF00892 EamA-like transporter family FED53_10390 PF13302 Acetyltransferase (GNAT) domain FED53_10460 PF00583 Acetyltransferase (GNAT) family FED53_10480 PF00248 Aldo/keto reductase family FED53_10490 PF00561 alpha/beta hydrolase fold FED53_10495 PF04439 Streptomycin adenylyltransferase FED53_10505 PF06713 Bacterial PH domain FED53_10510 PF13302 Acetyltransferase (GNAT) domain FED53_10515 PF16888 Domain of unknown function (DUF5082) FED53_10525 PF14431 YwqJ-like deaminase FED53_10525 PF04740 LXG domain of WXG superfamily FED53_10525 PF14449 Pre-toxin TG FED53_10535 PF04740 LXG domain of WXG superfamily FED53_10560 PF01743 Poly A polymerase head domain FED53_10560 PF12627 Probable RNA and SrmB- binding site of polymerase A FED53_10560 PF01966 HD domain FED53_10590 PF02583 Metal-sensitive transcriptional repressor FED53_10595 PF01206 Sulfurtransferase TusA FED53_10600 PF13686 DsrE/DsrF/DrsH-like family FED53_10605 PF00581 Rhodanese-like domain FED53_10610 PF00581 Rhodanese-like domain FED53_10610 PF01206 Sulfurtransferase TusA FED53_10615 PF00581 Rhodanese-like domain FED53_10615 PF00753 Metallo-beta-lactamase superfamily FED53_10620 PF01206 Sulfurtransferase TusA FED53_10625 PF01925 Sulfite exporter TauE/SafE FED53_10630 PF01040 UbiA prenyltransferase family FED53_10640 PF17932 Tetracyclin repressor-like, C-terminal domain FED53_10640 PF00440 Bacterial regulatory proteins, tetR family FED53_10645 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FED53_10645 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FED53_10655 PF02770 Acyl-CoA dehydrogenase, middle domain FED53_10655 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FED53_10655 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FED53_10660 PF08240 Alcohol dehydrogenase GroES-like domain FED53_10660 PF00107 Zinc-binding dehydrogenase FED53_10690 PF01906 Putative heavy-metal-binding FED53_10710 PF07501 G5 domain FED53_10710 PF03990 G5-linked-Ubiquitin-like domain FED53_10710 PF06725 3D domain FED53_10720 PF13091 PLD-like domain FED53_10720 PF13396 Phospholipase_D-nuclease N-terminal FED53_10725 PF01380 SIS domain FED53_10725 PF01418 Helix-turn-helix domain, rpiR family FED53_10730 PF00232 Glycosyl hydrolase family 1 FED53_10765 PF06039 Malate:quinone oxidoreductase (Mqo) FED53_10780 PF00313 'Cold-shock' DNA-binding domain FED53_10790 PF00144 Beta-lactamase FED53_10805 PF13302 Acetyltransferase (GNAT) domain FED53_10810 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase FED53_10810 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain FED53_10815 PF03466 LysR substrate binding domain FED53_10815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FED53_10825 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FED53_10840 PF01266 FAD dependent oxidoreductase FED53_10850 PF01609 Transposase DDE domain FED53_10875 PF12706 Beta-lactamase superfamily domain FED53_10915 PF13302 Acetyltransferase (GNAT) domain FED53_10925 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FED53_10925 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FED53_10930 PF01380 SIS domain FED53_10935 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family FED53_10940 PF01638 HxlR-like helix-turn-helix FED53_10945 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain FED53_10945 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain FED53_10950 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain FED53_10950 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FED53_10960 PF00342 Phosphoglucose isomerase FED53_10965 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain FED53_10965 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain FED53_10970 PF00923 Transaldolase/Fructose-6-phosphate aldolase FED53_10980 PF01740 STAS domain FED53_10995 PF13538 UvrD-like helicase C-terminal domain FED53_11005 PF07486 Cell Wall Hydrolase FED53_11020 PF05036 Sporulation related domain FED53_11020 PF01520 N-acetylmuramoyl-L-alanine amidase FED53_11040 PF01554 MatE FED53_11070 PF00004 ATPase family associated with various cellular activities (AAA) FED53_11080 PF04542 Sigma-70 region 2 FED53_11080 PF08281 Sigma-70, region 4 FED53_11085 PF00183 Hsp90 protein FED53_11090 PF12146 Serine aminopeptidase, S33 FED53_11100 PF12650 Domain of unknown function (DUF3784) FED53_11115 PF07859 alpha/beta hydrolase fold FED53_11120 PF00067 Cytochrome P450 FED53_11125 PF03737 Aldolase/RraA FED53_11135 PF00149 Calcineurin-like phosphoesterase FED53_11145 PF03576 Peptidase family S58 FED53_11160 PF00501 AMP-binding enzyme FED53_11160 PF13193 AMP-binding enzyme C-terminal domain FED53_11165 PF04294 VanW like protein FED53_11170 PF01047 MarR family FED53_11175 PF13193 AMP-binding enzyme C-terminal domain FED53_11175 PF00501 AMP-binding enzyme FED53_11180 PF13460 NAD(P)H-binding FED53_11185 PF00293 NUDIX domain FED53_11205 PF00583 Acetyltransferase (GNAT) family FED53_11210 PF00583 Acetyltransferase (GNAT) family FED53_11210 PF00795 Carbon-nitrogen hydrolase FED53_11215 PF03167 Uracil DNA glycosylase superfamily FED53_11220 PF00877 NlpC/P60 family FED53_11225 PF02602 Uroporphyrinogen-III synthase HemD FED53_11230 PF01614 Bacterial transcriptional regulator FED53_11230 PF09339 IclR helix-turn-helix domain FED53_11235 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FED53_11235 PF00289 Biotin carboxylase, N-terminal domain FED53_11235 PF02785 Biotin carboxylase C-terminal domain FED53_11240 PF00364 Biotin-requiring enzyme FED53_11245 PF02626 Carboxyltransferase domain, subdomain A and B FED53_11250 PF02682 Carboxyltransferase domain, subdomain C and D FED53_11255 PF07286 Protein of unknown function (DUF1445) FED53_11260 PF01566 Natural resistance-associated macrophage protein FED53_11265 PF03746 LamB/YcsF family FED53_11270 PF00877 NlpC/P60 family FED53_11285 PF00176 SNF2 family N-terminal domain FED53_11285 PF00271 Helicase conserved C-terminal domain FED53_11285 PF04434 SWIM zinc finger FED53_11290 PF00196 Bacterial regulatory proteins, luxR family FED53_11290 PF00072 Response regulator receiver domain FED53_11295 PF07730 Histidine kinase FED53_11295 PF13185 GAF domain FED53_11310 PF00920 Dehydratase family FED53_11315 PF01368 DHH family FED53_11315 PF02833 DHHA2 domain FED53_11330 PF01063 Amino-transferase class IV FED53_11340 PF00860 Permease family FED53_11345 PF09349 OHCU decarboxylase FED53_11345 PF01014 Uricase FED53_11350 PF00576 HIUase/Transthyretin family FED53_11355 PF00583 Acetyltransferase (GNAT) family FED53_11380 PF02899 Phage integrase, N-terminal SAM-like domain FED53_11380 PF00589 Phage integrase family FED53_11395 PF09515 Thiamine transporter protein (Thia_YuaJ) FED53_11405 PF00857 Isochorismatase family FED53_11415 PF08892 YqcI/YcgG family FED53_11420 PF00561 alpha/beta hydrolase fold FED53_11420 PF08386 TAP-like protein FED53_11425 PF03989 DNA gyrase C-terminal domain, beta-propeller FED53_11425 PF00521 DNA gyrase/topoisomerase IV, subunit A FED53_11430 PF00204 DNA gyrase B FED53_11430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FED53_11430 PF01751 Toprim domain FED53_11430 PF00986 DNA gyrase B subunit, carboxyl terminus FED53_11435 PF13380 CoA binding domain FED53_11440 PF02660 Glycerol-3-phosphate acyltransferase FED53_11445 PF01521 Iron-sulphur cluster biosynthesis FED53_11450 PF03061 Thioesterase superfamily FED53_11465 PF08177 Small acid-soluble spore protein N family FED53_11475 PF00578 AhpC/TSA family FED53_11480 PF00330 Aconitase family (aconitate hydratase) FED53_11480 PF00694 Aconitase C-terminal domain FED53_11495 PF08179 Small acid-soluble spore protein P family FED53_11505 PF02735 Ku70/Ku80 beta-barrel domain FED53_11540 PF07690 Major Facilitator Superfamily FED53_11545 PF03631 Virulence factor BrkB FED53_11555 PF07690 Major Facilitator Superfamily FED53_11560 PF13411 MerR HTH family regulatory protein FED53_11565 PF01740 STAS domain FED53_11565 PF00916 Sulfate permease family FED53_11570 PF13673 Acetyltransferase (GNAT) domain FED53_11575 PF00072 Response regulator receiver domain FED53_11575 PF00486 Transcriptional regulatory protein, C terminal FED53_11580 PF00672 HAMP domain FED53_11580 PF13426 PAS domain FED53_11580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FED53_11580 PF00512 His Kinase A (phospho-acceptor) domain FED53_11585 PF00583 Acetyltransferase (GNAT) family FED53_11605 PF07454 Stage II sporulation protein P (SpoIIP) FED53_11610 PF00989 PAS fold FED53_11610 PF13188 PAS domain FED53_11610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FED53_11610 PF00512 His Kinase A (phospho-acceptor) domain FED53_11610 PF13426 PAS domain FED53_11615 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FED53_11620 PF07685 CobB/CobQ-like glutamine amidotransferase domain FED53_11620 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FED53_11630 PF00909 Ammonium Transporter Family FED53_11640 PF07849 Protein of unknown function (DUF1641) FED53_11645 PF07992 Pyridine nucleotide-disulphide oxidoreductase FED53_11650 PF07969 Amidohydrolase family FED53_11660 PF00528 Binding-protein-dependent transport system inner membrane component FED53_11670 PF00005 ABC transporter FED53_11680 PF00296 Luciferase-like monooxygenase FED53_11695 PF02585 GlcNAc-PI de-N-acetylase FED53_11700 PF00534 Glycosyl transferases group 1 FED53_11700 PF13439 Glycosyltransferase Family 4 FED53_11715 PF13477 Glycosyl transferase 4-like FED53_11715 PF00534 Glycosyl transferases group 1 FED53_11720 PF16363 GDP-mannose 4,6 dehydratase FED53_11745 PF07687 Peptidase dimerisation domain FED53_11745 PF01546 Peptidase family M20/M25/M40 FED53_11750 PF16800 IseA DL-endopeptidase inhibitor FED53_11755 PF00583 Acetyltransferase (GNAT) family FED53_11760 PF00296 Luciferase-like monooxygenase FED53_11770 PF09335 SNARE associated Golgi protein FED53_11775 PF01554 MatE FED53_11780 PF08439 Oligopeptidase F FED53_11780 PF01432 Peptidase family M3 FED53_11785 PF03372 Endonuclease/Exonuclease/phosphatase family FED53_11790 PF00149 Calcineurin-like phosphoesterase FED53_11790 PF02872 5'-nucleotidase, C-terminal domain FED53_11805 PF03631 Virulence factor BrkB FED53_11815 PF03176 MMPL family FED53_11840 PF00171 Aldehyde dehydrogenase family FED53_11845 PF01472 PUA domain FED53_11845 PF00696 Amino acid kinase family FED53_11850 PF14748 Pyrroline-5-carboxylate reductase dimerisation FED53_11850 PF03807 NADP oxidoreductase coenzyme F420-dependent FED53_11880 PF06725 3D domain FED53_11880 PF01476 LysM domain FED53_11895 PF01047 MarR family FED53_11900 PF02566 OsmC-like protein FED53_11905 PF11799 impB/mucB/samB family C-terminal domain FED53_11905 PF11798 IMS family HHH motif FED53_11905 PF00817 impB/mucB/samB family FED53_11925 PF00005 ABC transporter FED53_11930 PF00392 Bacterial regulatory proteins, gntR family FED53_11935 PF03466 LysR substrate binding domain FED53_11935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FED53_11945 PF08000 Bacterial PH domain FED53_11950 PF05067 Manganese containing catalase FED53_11955 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FED53_11955 PF02272 DHHA1 domain FED53_11955 PF01411 tRNA synthetases class II (A) FED53_11960 PF01040 UbiA prenyltransferase family FED53_11965 PF09382 RQC domain FED53_11965 PF16124 RecQ zinc-binding FED53_11965 PF00270 DEAD/DEAH box helicase FED53_11965 PF00570 HRDC domain FED53_11965 PF00271 Helicase conserved C-terminal domain FED53_11980 PF00149 Calcineurin-like phosphoesterase FED53_11990 PF01131 DNA topoisomerase FED53_11990 PF01751 Toprim domain FED53_11995 PF17094 Uncharacterised protein family (UPF0715) FED53_12005 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FED53_12005 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FED53_12015 PF00480 ROK family FED53_12035 PF11132 Transcriptional regulator protein (SplA) FED53_12040 PF00356 Bacterial regulatory proteins, lacI family FED53_12040 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family FED53_12050 PF03553 Na+/H+ antiporter family FED53_12060 PF00005 ABC transporter FED53_12065 PF11071 Nucleoside 2-deoxyribosyltransferase YtoQ FED53_12070 PF12848 ABC transporter FED53_12070 PF00005 ABC transporter FED53_12075 PF03976 Polyphosphate kinase 2 (PPK2) FED53_12080 PF00296 Luciferase-like monooxygenase FED53_12085 PF13280 WYL domain FED53_12085 PF08279 HTH domain FED53_12090 PF01872 RibD C-terminal domain FED53_12100 PF07690 Major Facilitator Superfamily FED53_12110 PF17853 GGDEF-like domain FED53_12110 PF13556 PucR C-terminal helix-turn-helix domain FED53_12110 PF05651 Putative sugar diacid recognition FED53_12115 PF01565 FAD binding domain FED53_12115 PF02913 FAD linked oxidases, C-terminal domain FED53_12120 PF02754 Cysteine-rich domain FED53_12120 PF13183 4Fe-4S dicluster domain FED53_12125 PF02540 NAD synthase FED53_12130 PF01467 Cytidylyltransferase-like FED53_12135 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family FED53_12135 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain FED53_12135 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain FED53_12140 PF00857 Isochorismatase family FED53_12145 PF00293 NUDIX domain FED53_12155 PF00664 ABC transporter transmembrane region FED53_12155 PF00005 ABC transporter FED53_12195 PF08323 Starch synthase catalytic domain FED53_12195 PF00534 Glycosyl transferases group 1 FED53_12210 PF01381 Helix-turn-helix FED53_12210 PF08671 Anti-repressor SinI FED53_12215 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family FED53_12220 PF00132 Bacterial transferase hexapeptide (six repeats) FED53_12220 PF17836 PglD N-terminal domain FED53_12225 PF02397 Bacterial sugar transferase FED53_12235 PF16363 GDP-mannose 4,6 dehydratase FED53_12245 PF00535 Glycosyl transferase family 2 FED53_12250 PF13439 Glycosyltransferase Family 4 FED53_12250 PF00534 Glycosyl transferases group 1 FED53_12255 PF00534 Glycosyl transferases group 1 FED53_12255 PF13439 Glycosyltransferase Family 4 FED53_12260 PF02719 Polysaccharide biosynthesis protein FED53_12265 PF13614 AAA domain FED53_12270 PF13807 G-rich domain on putative tyrosine kinase FED53_12270 PF02706 Chain length determinant protein FED53_12280 PF01381 Helix-turn-helix FED53_12280 PF08671 Anti-repressor SinI FED53_12295 PF04294 VanW like protein FED53_12300 PF01266 FAD dependent oxidoreductase FED53_12325 PF13249 Squalene-hopene cyclase N-terminal domain FED53_12325 PF13243 Squalene-hopene cyclase C-terminal domain FED53_12330 PF00005 ABC transporter FED53_12340 PF12833 Helix-turn-helix domain FED53_12345 PF00703 Glycosyl hydrolases family 2 FED53_12345 PF02929 Beta galactosidase small chain FED53_12345 PF16353 Domain of unknown function(DUF4981) FED53_12345 PF02836 Glycosyl hydrolases family 2, TIM barrel domain FED53_12345 PF02837 Glycosyl hydrolases family 2, sugar binding domain FED53_12355 PF00092 von Willebrand factor type A domain FED53_12360 PF07728 AAA domain (dynein-related subfamily) FED53_12370 PF04542 Sigma-70 region 2 FED53_12370 PF08281 Sigma-70, region 4 FED53_12375 PF13800 Sigma factor regulator N-terminal FED53_12375 PF13791 Sigma factor regulator C-terminal FED53_12390 PF16242 Pyridoxamine 5'-phosphate oxidase like FED53_12395 PF02581 Thiamine monophosphate synthase FED53_12400 PF02110 Hydroxyethylthiazole kinase family FED53_12410 PF07690 Major Facilitator Superfamily FED53_12415 PF02245 Methylpurine-DNA glycosylase (MPG) FED53_12425 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FED53_12425 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FED53_12430 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FED53_12430 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FED53_12440 PF00356 Bacterial regulatory proteins, lacI family FED53_12445 PF07486 Cell Wall Hydrolase FED53_12450 PF00209 Sodium:neurotransmitter symporter family FED53_12470 PF03070 TENA/THI-4/PQQC family FED53_12475 PF00171 Aldehyde dehydrogenase family FED53_12480 PF01022 Bacterial regulatory protein, arsR family FED53_12495 PF01156 Inosine-uridine preferring nucleoside hydrolase FED53_12510 PF00080 Copper/zinc superoxide dismutase (SODC) FED53_12520 PF13840 ACT domain FED53_12520 PF00696 Amino acid kinase family FED53_12525 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FED53_12525 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FED53_12530 PF00294 pfkB family carbohydrate kinase FED53_12535 PF00455 DeoR C terminal sensor domain FED53_12535 PF08220 DeoR-like helix-turn-helix domain FED53_12545 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 FED53_12545 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) FED53_12565 PF00574 Clp protease FED53_12590 PF04444 Catechol dioxygenase N terminus FED53_12590 PF00775 Dioxygenase FED53_12595 PF02803 Thiolase, C-terminal domain FED53_12595 PF00108 Thiolase, N-terminal domain FED53_12605 PF13378 Enolase C-terminal domain-like FED53_12605 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FED53_12610 PF01144 Coenzyme A transferase FED53_12615 PF01144 Coenzyme A transferase FED53_12625 PF04199 Putative cyclase FED53_12635 PF04444 Catechol dioxygenase N terminus FED53_12635 PF00775 Dioxygenase FED53_12640 PF06574 FAD synthetase FED53_12645 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal FED53_12645 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal FED53_12650 PF01695 IstB-like ATP binding protein FED53_12655 PF02796 Helix-turn-helix domain of resolvase FED53_12655 PF00665 Integrase core domain FED53_12665 PF02954 Bacterial regulatory protein, Fis family FED53_12665 PF06505 Activator of aromatic catabolism FED53_12665 PF02830 V4R domain FED53_12665 PF00158 Sigma-54 interaction domain FED53_12670 PF01613 Flavin reductase like domain FED53_12690 PF04239 Protein of unknown function (DUF421) FED53_12695 PF13091 PLD-like domain FED53_12695 PF13396 Phospholipase_D-nuclease N-terminal FED53_12705 PF04239 Protein of unknown function (DUF421) FED53_12715 PF03862 SpoVAC/SpoVAEB sporulation membrane protein FED53_12720 PF07451 Stage V sporulation protein AD (SpoVAD) FED53_12725 PF03862 SpoVAC/SpoVAEB sporulation membrane protein FED53_12740 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) FED53_12750 PF00672 HAMP domain FED53_12750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FED53_12750 PF18698 Histidine kinase sensor domain FED53_12750 PF00512 His Kinase A (phospho-acceptor) domain FED53_12750 PF00989 PAS fold FED53_12755 PF00072 Response regulator receiver domain FED53_12755 PF00486 Transcriptional regulatory protein, C terminal FED53_12765 PF04138 GtrA-like protein FED53_12770 PF00535 Glycosyl transferase family 2 FED53_12775 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase FED53_12780 PF05067 Manganese containing catalase FED53_12785 PF10842 Protein of unknown function (DUF2642) FED53_12800 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain FED53_12800 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain FED53_12805 PF01594 AI-2E family transporter FED53_12810 PF00171 Aldehyde dehydrogenase family FED53_12830 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster FED53_12830 PF07992 Pyridine nucleotide-disulphide oxidoreductase FED53_12835 PF01493 GXGXG motif FED53_12835 PF01645 Conserved region in glutamate synthase FED53_12835 PF00310 Glutamine amidotransferases class-II FED53_12835 PF04898 Glutamate synthase central domain FED53_12840 PF03466 LysR substrate binding domain FED53_12840 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FED53_12850 PF13039 Protein of unknown function (DUF3900) FED53_12850 PF13037 Domain of unknown function (DUF3898) FED53_12855 PF00313 'Cold-shock' DNA-binding domain FED53_12870 PF05167 Uncharacterised ACR (DUF711) FED53_12885 PF03703 Bacterial PH domain FED53_12890 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FED53_12890 PF00390 Malic enzyme, N-terminal domain FED53_12890 PF03949 Malic enzyme, NAD binding domain FED53_12895 PF00206 Lyase FED53_12895 PF10415 Fumarase C C-terminus FED53_12900 PF03641 Possible lysine decarboxylase FED53_12905 PF04239 Protein of unknown function (DUF421) FED53_12920 PF03949 Malic enzyme, NAD binding domain FED53_12920 PF00390 Malic enzyme, N-terminal domain FED53_12930 PF00854 POT family FED53_12935 PF01979 Amidohydrolase family FED53_12940 PF16736 Single Cache-like FED53_12940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FED53_12940 PF00512 His Kinase A (phospho-acceptor) domain FED53_12940 PF00989 PAS fold FED53_12945 PF00072 Response regulator receiver domain FED53_12945 PF00486 Transcriptional regulatory protein, C terminal FED53_12950 PF05698 Bacterial trigger factor protein (TF) C-terminus FED53_12960 PF03553 Na+/H+ antiporter family FED53_12965 PF09844 Uncharacterized conserved protein (COG2071) FED53_12975 PF00691 OmpA family FED53_12975 PF13677 Membrane MotB of proton-channel complex MotA/MotB FED53_12980 PF01618 MotA/TolQ/ExbB proton channel family FED53_12990 PF00667 FAD binding domain FED53_12990 PF00258 Flavodoxin FED53_12990 PF00175 Oxidoreductase NAD-binding domain FED53_12990 PF00067 Cytochrome P450 FED53_12995 PF00171 Aldehyde dehydrogenase family FED53_13000 PF00375 Sodium:dicarboxylate symporter family FED53_13010 PF04389 Peptidase family M28 FED53_13010 PF02225 PA domain FED53_13015 PF03471 Transporter associated domain FED53_13015 PF02080 TrkA-C domain FED53_13015 PF00999 Sodium/hydrogen exchanger family FED53_13020 PF13739 Deacetylase PdaC FED53_13020 PF01522 Polysaccharide deacetylase FED53_13020 PF11738 Protein of unknown function (DUF3298) FED53_13035 PF05816 Toxic anion resistance protein (TelA) FED53_13045 PF00884 Sulfatase FED53_13060 PF01554 MatE FED53_13065 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin FED53_13065 PF18277 AbrB C-terminal domain FED53_13070 PF02334 Replication terminator protein FED53_13095 PF04134 Protein of unknown function, DUF393 FED53_13100 PF14748 Pyrroline-5-carboxylate reductase dimerisation FED53_13100 PF03807 NADP oxidoreductase coenzyme F420-dependent FED53_13105 PF02585 GlcNAc-PI de-N-acetylase FED53_13110 PF08830 Protein of unknown function (DUF1806) FED53_13115 PF01367 5'-3' exonuclease, C-terminal SAM fold FED53_13115 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain FED53_13130 PF08546 Ketopantoate reductase PanE/ApbA C terminal FED53_13130 PF02558 Ketopantoate reductase PanE/ApbA FED53_13135 PF02492 CobW/HypB/UreG, nucleotide-binding domain FED53_13135 PF07683 Cobalamin synthesis protein cobW C-terminal domain FED53_13140 PF13411 MerR HTH family regulatory protein FED53_13145 PF00892 EamA-like transporter family FED53_13150 PF01923 Cobalamin adenosyltransferase FED53_13160 PF00300 Histidine phosphatase superfamily (branch 1) FED53_13165 PF02654 Cobalamin-5-phosphate synthase FED53_13175 PF00155 Aminotransferase class I and II FED53_13180 PF03186 CobD/Cbib protein FED53_13190 PF01497 Periplasmic binding protein FED53_13200 PF00085 Thioredoxin FED53_13210 PF14005 YpjP-like protein FED53_13215 PF04445 Putative SAM-dependent methyltransferase FED53_13220 PF06491 Disulphide isomerase FED53_13225 PF01522 Polysaccharide deacetylase FED53_13235 PF08712 Scaffold protein Nfu/NifU N terminal FED53_13235 PF13769 Virulence factor FED53_13240 PF12848 ABC transporter FED53_13240 PF16326 ABC transporter C-terminal domain FED53_13240 PF00005 ABC transporter FED53_13245 PF01966 HD domain FED53_13250 PF00255 Glutathione peroxidase FED53_13260 PF01268 Formate--tetrahydrofolate ligase FED53_13265 PF04204 Homoserine O-succinyltransferase FED53_13270 PF01520 N-acetylmuramoyl-L-alanine amidase FED53_13270 PF05036 Sporulation related domain FED53_13280 PF08241 Methyltransferase domain FED53_13295 PF00480 ROK family FED53_13295 PF01325 Iron dependent repressor, N-terminal DNA binding domain FED53_13300 PF13416 Bacterial extracellular solute-binding protein FED53_13305 PF00128 Alpha amylase, catalytic domain FED53_13305 PF02903 Alpha amylase, N-terminal ig-like domain FED53_13305 PF16657 Maltogenic Amylase, C-terminal domain FED53_13315 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FED53_13315 PF01872 RibD C-terminal domain FED53_13320 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase FED53_13320 PF00925 GTP cyclohydrolase II FED53_13325 PF07690 Major Facilitator Superfamily FED53_13345 PF07690 Major Facilitator Superfamily FED53_13350 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase FED53_13370 PF01131 DNA topoisomerase FED53_13370 PF01751 Toprim domain FED53_13445 PF00403 Heavy-metal-associated domain FED53_13465 PF01451 Low molecular weight phosphotyrosine protein phosphatase FED53_13470 PF02040 Arsenical pump membrane protein FED53_13475 PF01022 Bacterial regulatory protein, arsR family FED53_13485 PF01022 Bacterial regulatory protein, arsR family FED53_13490 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FED53_13510 PF08281 Sigma-70, region 4 FED53_13510 PF04542 Sigma-70 region 2 FED53_13520 PF01037 Lrp/AsnC ligand binding domain FED53_13525 PF12706 Beta-lactamase superfamily domain FED53_13530 PF00144 Beta-lactamase FED53_13530 PF11954 Domain of unknown function (DUF3471) FED53_13535 PF03358 NADPH-dependent FMN reductase FED53_13540 PF01613 Flavin reductase like domain FED53_13555 PF07563 Protein of unknown function (DUF1541) FED53_13560 PF00486 Transcriptional regulatory protein, C terminal FED53_13560 PF00072 Response regulator receiver domain FED53_13565 PF13426 PAS domain FED53_13565 PF00512 His Kinase A (phospho-acceptor) domain FED53_13565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FED53_13565 PF00672 HAMP domain FED53_13575 PF07690 Major Facilitator Superfamily FED53_13580 PF07690 Major Facilitator Superfamily FED53_13585 PF00196 Bacterial regulatory proteins, luxR family FED53_13585 PF00072 Response regulator receiver domain FED53_13590 PF07730 Histidine kinase FED53_13595 PF00487 Fatty acid desaturase FED53_13605 PF02811 PHP domain FED53_13610 PF03773 Predicted permease FED53_13630 PF00005 ABC transporter FED53_13630 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FED53_13635 PF00877 NlpC/P60 family FED53_13640 PF02016 LD-carboxypeptidase N-terminal domain FED53_13640 PF17676 LD-carboxypeptidase C-terminal domain FED53_13645 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FED53_13650 PF00005 ABC transporter FED53_13650 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FED53_13655 PF00528 Binding-protein-dependent transport system inner membrane component FED53_13655 PF12911 N-terminal TM domain of oligopeptide transport permease C FED53_13660 PF00528 Binding-protein-dependent transport system inner membrane component FED53_13665 PF04951 D-aminopeptidase FED53_13670 PF00860 Permease family FED53_13690 PF07690 Major Facilitator Superfamily FED53_13695 PF01773 Na+ dependent nucleoside transporter N-terminus FED53_13695 PF07662 Na+ dependent nucleoside transporter C-terminus FED53_13710 PF10782 Zinc-finger FED53_13715 PF13456 Reverse transcriptase-like FED53_13720 PF13456 Reverse transcriptase-like FED53_13740 PF10752 Protein of unknown function (DUF2533) FED53_13750 PF00350 Dynamin family FED53_13755 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family FED53_13760 PF02797 Chalcone and stilbene synthases, C-terminal domain FED53_13760 PF00195 Chalcone and stilbene synthases, N-terminal domain FED53_13770 PF00860 Permease family FED53_13775 PF00156 Phosphoribosyl transferase domain FED53_13780 PF02074 Carboxypeptidase Taq (M32) metallopeptidase FED53_13785 PF13307 Helicase C-terminal domain FED53_13800 PF02926 THUMP domain FED53_13800 PF01170 Putative RNA methylase family UPF0020 FED53_13805 PF00128 Alpha amylase, catalytic domain FED53_13805 PF16657 Maltogenic Amylase, C-terminal domain FED53_13810 PF00072 Response regulator receiver domain FED53_13810 PF00196 Bacterial regulatory proteins, luxR family FED53_13815 PF07730 Histidine kinase FED53_13815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FED53_13840 PF05103 DivIVA protein FED53_13845 PF06908 YspA SLOG family FED53_13855 PF13482 RNase_H superfamily FED53_13860 PF00270 DEAD/DEAH box helicase FED53_13860 PF09369 Domain of unknown function (DUF1998) FED53_13860 PF00271 Helicase conserved C-terminal domain FED53_13870 PF03190 Protein of unknown function, DUF255 FED53_13885 PF01497 Periplasmic binding protein FED53_13890 PF00005 ABC transporter FED53_13895 PF01032 FecCD transport family FED53_13900 PF01032 FecCD transport family FED53_13910 PF03992 Antibiotic biosynthesis monooxygenase FED53_13935 PF00313 'Cold-shock' DNA-binding domain FED53_13940 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) FED53_13945 PF00474 Sodium:solute symporter family FED53_13960 PF01053 Cys/Met metabolism PLP-dependent enzyme FED53_13965 PF01053 Cys/Met metabolism PLP-dependent enzyme FED53_13970 PF08757 CotH kinase protein FED53_13980 PF14179 YppG-like protein FED53_13990 PF08807 Bacterial domain of unknown function (DUF1798) FED53_14000 PF10720 Protein of unknown function (DUF2515) FED53_14005 PF03838 Recombination protein U FED53_14010 PF00912 Transglycosylase FED53_14010 PF00905 Penicillin binding protein transpeptidase domain FED53_14020 PF00730 HhH-GPD superfamily base excision DNA repair protein FED53_14020 PF00633 Helix-hairpin-helix motif FED53_14020 PF10576 Iron-sulfur binding domain of endonuclease III FED53_14025 PF07261 Replication initiation and membrane attachment FED53_14030 PF00152 tRNA synthetases class II (D, K and N) FED53_14030 PF01336 OB-fold nucleic acid binding domain FED53_14035 PF00155 Aminotransferase class I and II FED53_14045 PF14084 Protein of unknown function (DUF4264) FED53_14055 PF00929 Exonuclease FED53_14055 PF04851 Type III restriction enzyme, res subunit FED53_14055 PF13307 Helicase C-terminal domain FED53_14060 PF02261 Aspartate decarboxylase FED53_14065 PF02569 Pantoate-beta-alanine ligase FED53_14070 PF02548 Ketopantoate hydroxymethyltransferase FED53_14075 PF08279 HTH domain FED53_14075 PF03099 Biotin/lipoate A/B protein ligase family FED53_14075 PF02237 Biotin protein ligase C terminal domain FED53_14080 PF13735 tRNA nucleotidyltransferase domain 2 putative FED53_14080 PF12627 Probable RNA and SrmB- binding site of polymerase A FED53_14080 PF01743 Poly A polymerase head domain FED53_14085 PF00534 Glycosyl transferases group 1 FED53_14085 PF13439 Glycosyltransferase Family 4 FED53_14090 PF02585 GlcNAc-PI de-N-acetylase FED53_14095 PF02142 MGS-like domain FED53_14100 PF05173 Dihydrodipicolinate reductase, C-terminus FED53_14100 PF01113 Dihydrodipicolinate reductase, N-terminus FED53_14105 PF03819 MazG nucleotide pyrophosphohydrolase domain FED53_14110 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 FED53_14110 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) FED53_14115 PF04298 Putative neutral zinc metallopeptidase FED53_14120 PF09577 Sporulation protein YpjB (SpoYpjB) FED53_14125 PF14504 CAP-associated N-terminal FED53_14125 PF00188 Cysteine-rich secretory protein family FED53_14130 PF00571 CBS domain FED53_14135 PF08868 YugN-like family FED53_14140 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) FED53_14145 PF03626 Prokaryotic Cytochrome C oxidase subunit IV FED53_14150 PF00510 Cytochrome c oxidase subunit III FED53_14155 PF00115 Cytochrome C and Quinol oxidase polypeptide I FED53_14160 PF02790 Cytochrome C oxidase subunit II, transmembrane domain FED53_14160 PF00116 Cytochrome C oxidase subunit II, periplasmic domain FED53_14160 PF00034 Cytochrome c FED53_14165 PF02628 Cytochrome oxidase assembly protein FED53_14170 PF02785 Biotin carboxylase C-terminal domain FED53_14170 PF00289 Biotin carboxylase, N-terminal domain FED53_14170 PF00364 Biotin-requiring enzyme FED53_14170 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FED53_14170 PF00682 HMGL-like FED53_14170 PF02436 Conserved carboxylase domain FED53_14175 PF01098 Cell cycle protein FED53_14180 PF07408 Protein of unknown function (DUF1507) FED53_14190 PF02562 PhoH-like protein FED53_14190 PF13638 PIN domain FED53_14195 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) FED53_14205 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) FED53_14215 PF14036 YlaH-like protein FED53_14225 PF17259 Family of unknown function (DUF5325) FED53_14230 PF00459 Inositol monophosphatase family FED53_14240 PF06335 Protein of unknown function (DUF1054) FED53_14245 PF05256 Uncharacterised protein family (UPF0223) FED53_14250 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain FED53_14250 PF01276 Orn/Lys/Arg decarboxylase, major domain FED53_14265 PF02028 BCCT, betaine/carnitine/choline family transporter FED53_14275 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FED53_14275 PF07992 Pyridine nucleotide-disulphide oxidoreductase FED53_14280 PF02817 e3 binding domain FED53_14280 PF00364 Biotin-requiring enzyme FED53_14280 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FED53_14285 PF02779 Transketolase, pyrimidine binding domain FED53_14285 PF02780 Transketolase, C-terminal domain FED53_14290 PF00676 Dehydrogenase E1 component FED53_14305 PF01327 Polypeptide deformylase FED53_14320 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain FED53_14320 PF00753 Metallo-beta-lactamase superfamily FED53_14320 PF17770 Ribonuclease J C-terminal domain FED53_14335 PF00005 ABC transporter FED53_14340 PF00196 Bacterial regulatory proteins, luxR family FED53_14340 PF00072 Response regulator receiver domain FED53_14345 PF07730 Histidine kinase FED53_14350 PF02080 TrkA-C domain FED53_14350 PF02254 TrkA-N domain FED53_14355 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FED53_14355 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain FED53_14360 PF10417 C-terminal domain of 1-Cys peroxiredoxin FED53_14360 PF00578 AhpC/TSA family FED53_14365 PF00924 Mechanosensitive ion channel FED53_14370 PF07687 Peptidase dimerisation domain FED53_14370 PF01546 Peptidase family M20/M25/M40 FED53_14375 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal FED53_14375 PF00132 Bacterial transferase hexapeptide (six repeats) FED53_14375 PF14602 Hexapeptide repeat of succinyl-transferase FED53_14380 PF03466 LysR substrate binding domain FED53_14380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FED53_14385 PF08796 Protein of unknown function (DUF1797) FED53_14400 PF10388 EAL-domain associated signalling protein domain FED53_14400 PF00563 EAL domain FED53_14410 PF10518 TAT (twin-arginine translocation) pathway signal sequence FED53_14410 PF00149 Calcineurin-like phosphoesterase FED53_14420 PF17941 Polyphosphate kinase C-terminal domain 1 FED53_14420 PF13089 Polyphosphate kinase N-terminal domain FED53_14420 PF02503 Polyphosphate kinase middle domain FED53_14420 PF13090 Polyphosphate kinase C-terminal domain 2 FED53_14425 PF02541 Ppx/GppA phosphatase family FED53_14430 PF03734 L,D-transpeptidase catalytic domain FED53_14430 PF01476 LysM domain FED53_14440 PF06800 Sugar transport protein FED53_14445 PF14177 YkyB-like protein FED53_14450 PF01584 CheW-like domain FED53_14450 PF00072 Response regulator receiver domain FED53_14465 PF00155 Aminotransferase class I and II FED53_14470 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FED53_14470 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FED53_14475 PF00881 Nitroreductase family FED53_14490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FED53_14490 PF03466 LysR substrate binding domain FED53_14495 PF01638 HxlR-like helix-turn-helix FED53_14500 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family FED53_14505 PF01380 SIS domain FED53_14510 PF03788 LrgA family FED53_14515 PF04172 LrgB-like family FED53_14520 PF05524 PEP-utilising enzyme, N-terminal FED53_14520 PF00391 PEP-utilising enzyme, mobile domain FED53_14520 PF02896 PEP-utilising enzyme, TIM barrel domain FED53_14525 PF00381 PTS HPr component phosphorylation site FED53_14530 PF00367 phosphotransferase system, EIIB FED53_14530 PF02378 Phosphotransferase system, EIIC FED53_14530 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 FED53_14535 PF00874 PRD domain FED53_14535 PF03123 CAT RNA binding domain FED53_14545 PF00885 6,7-dimethyl-8-ribityllumazine synthase FED53_14550 PF00925 GTP cyclohydrolase II FED53_14550 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase FED53_14555 PF00677 Lumazine binding domain FED53_14565 PF00248 Aldo/keto reductase family FED53_14570 PF02574 Homocysteine S-methyltransferase FED53_14570 PF02219 Methylenetetrahydrofolate reductase FED53_14575 PF02965 Vitamin B12 dependent methionine synthase, activation domain FED53_14575 PF02574 Homocysteine S-methyltransferase FED53_14575 PF02310 B12 binding domain FED53_14575 PF00809 Pterin binding enzyme FED53_14575 PF02607 B12 binding domain FED53_14580 PF02554 Carbon starvation protein CstA FED53_14600 PF00860 Permease family FED53_14605 PF02667 Short chain fatty acid transporter FED53_14615 PF07997 Protein of unknown function (DUF1694) FED53_14620 PF07486 Cell Wall Hydrolase FED53_14635 PF01734 Patatin-like phospholipase FED53_14635 PF00027 Cyclic nucleotide-binding domain FED53_14640 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) FED53_14645 PF13460 NAD(P)H-binding FED53_14650 PF14489 QueF-like protein FED53_14655 PF04055 Radical SAM superfamily FED53_14660 PF01242 6-pyruvoyl tetrahydropterin synthase FED53_14665 PF06508 Queuosine biosynthesis protein QueC FED53_14670 PF03845 Spore germination protein FED53_14680 PF05504 Spore germination B3/ GerAC like, C-terminal FED53_14685 PF03323 Bacillus/Clostridium GerA spore germination protein FED53_14690 PF00106 short chain dehydrogenase FED53_14705 PF00004 ATPase family associated with various cellular activities (AAA) FED53_14705 PF07724 AAA domain (Cdc48 subfamily) FED53_14705 PF10431 C-terminal, D2-small domain, of ClpB protein FED53_14705 PF17871 AAA lid domain FED53_14720 PF01047 MarR family FED53_14730 PF02535 ZIP Zinc transporter FED53_14740 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FED53_14740 PF07992 Pyridine nucleotide-disulphide oxidoreductase FED53_14745 PF02653 Branched-chain amino acid transport system / permease component FED53_14750 PF00005 ABC transporter FED53_14760 PF03079 ARD/ARD' family FED53_14765 PF00596 Class II Aldolase and Adducin N-terminal domain FED53_14775 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain FED53_14775 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain FED53_14780 PF00155 Aminotransferase class I and II FED53_14785 PF00795 Carbon-nitrogen hydrolase FED53_14790 PF01636 Phosphotransferase enzyme family FED53_14795 PF01008 Initiation factor 2 subunit family FED53_14805 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain FED53_14805 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FED53_14810 PF00989 PAS fold FED53_14810 PF00512 His Kinase A (phospho-acceptor) domain FED53_14810 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FED53_14810 PF13188 PAS domain FED53_14810 PF13426 PAS domain FED53_14815 PF02540 NAD synthase FED53_14820 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family FED53_14820 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain FED53_14820 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain FED53_14825 PF02310 B12 binding domain FED53_14825 PF04055 Radical SAM superfamily FED53_14830 PF02386 Cation transport protein FED53_14835 PF00561 alpha/beta hydrolase fold FED53_14860 PF00269 Small, acid-soluble spore proteins, alpha/beta type FED53_14865 PF03741 Integral membrane protein TerC family FED53_14870 PF04397 LytTr DNA-binding domain FED53_14870 PF00072 Response regulator receiver domain FED53_14875 PF00245 Alkaline phosphatase FED53_14880 PF03323 Bacillus/Clostridium GerA spore germination protein FED53_14890 PF03845 Spore germination protein FED53_14895 PF01641 SelR domain FED53_14895 PF01625 Peptide methionine sulfoxide reductase FED53_14900 PF07690 Major Facilitator Superfamily FED53_14905 PF01047 MarR family FED53_14920 PF00860 Permease family FED53_14925 PF07690 Major Facilitator Superfamily FED53_14955 PF10502 Signal peptidase, peptidase S26 FED53_14960 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FED53_14965 PF01595 Cyclin M transmembrane N-terminal domain FED53_14965 PF03471 Transporter associated domain FED53_14965 PF00571 CBS domain FED53_14975 PF02872 5'-nucleotidase, C-terminal domain FED53_14975 PF17936 Bacterial Ig domain FED53_14975 PF00149 Calcineurin-like phosphoesterase FED53_14980 PF00664 ABC transporter transmembrane region FED53_14980 PF00005 ABC transporter FED53_14985 PF00005 ABC transporter FED53_14985 PF00664 ABC transporter transmembrane region FED53_14990 PF02322 Cytochrome bd terminal oxidase subunit II FED53_14995 PF01654 Cytochrome bd terminal oxidase subunit I FED53_15010 PF00005 ABC transporter FED53_15035 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 FED53_15035 PF02378 Phosphotransferase system, EIIC FED53_15035 PF00367 phosphotransferase system, EIIB FED53_15040 PF01979 Amidohydrolase family FED53_15045 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase FED53_15085 PF05116 Sucrose-6F-phosphate phosphohydrolase FED53_15090 PF00356 Bacterial regulatory proteins, lacI family FED53_15095 PF00375 Sodium:dicarboxylate symporter family FED53_15110 PF12650 Domain of unknown function (DUF3784) FED53_15140 PF13378 Enolase C-terminal domain-like FED53_15140 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FED53_15150 PF01418 Helix-turn-helix domain, rpiR family FED53_15150 PF01380 SIS domain FED53_15155 PF01546 Peptidase family M20/M25/M40 FED53_15155 PF07687 Peptidase dimerisation domain FED53_15175 PF03741 Integral membrane protein TerC family FED53_15210 PF18593 CdiI immunity protein FED53_15230 PF00011 Hsp20/alpha crystallin family FED53_15240 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FED53_15240 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FED53_15255 PF03992 Antibiotic biosynthesis monooxygenase FED53_15260 PF01261 Xylose isomerase-like TIM barrel FED53_15265 PF00107 Zinc-binding dehydrogenase FED53_15265 PF08240 Alcohol dehydrogenase GroES-like domain FED53_15270 PF01261 Xylose isomerase-like TIM barrel FED53_15280 PF01261 Xylose isomerase-like TIM barrel FED53_15285 PF00107 Zinc-binding dehydrogenase FED53_15285 PF08240 Alcohol dehydrogenase GroES-like domain FED53_15290 PF01261 Xylose isomerase-like TIM barrel FED53_15295 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FED53_15295 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FED53_15300 PF02653 Branched-chain amino acid transport system / permease component FED53_15305 PF00005 ABC transporter FED53_15315 PF00356 Bacterial regulatory proteins, lacI family FED53_15325 PF07694 5TMR of 5TMR-LYT FED53_15325 PF06580 Histidine kinase FED53_15330 PF00072 Response regulator receiver domain FED53_15330 PF12833 Helix-turn-helix domain FED53_15355 PF14411 A nuclease of the HNH/ENDO VII superfamily with conserved LHH FED53_15355 PF04740 LXG domain of WXG superfamily FED53_15405 PF04493 Endonuclease V FED53_15415 PF04740 LXG domain of WXG superfamily FED53_15415 PF14431 YwqJ-like deaminase FED53_15415 PF14449 Pre-toxin TG FED53_15545 PF04740 LXG domain of WXG superfamily FED53_15545 PF14449 Pre-toxin TG FED53_15545 PF14410 HNH/ENDO VII superfamily nuclease with conserved GHE residues FED53_15560 PF02082 Transcriptional regulator FED53_15565 PF05368 NmrA-like family FED53_15575 PF07875 Coat F domain FED53_15580 PF00107 Zinc-binding dehydrogenase FED53_15580 PF08240 Alcohol dehydrogenase GroES-like domain FED53_15580 PF13823 Alcohol dehydrogenase GroES-associated FED53_15590 PF07875 Coat F domain FED53_15600 PF01520 N-acetylmuramoyl-L-alanine amidase FED53_15600 PF08239 Bacterial SH3 domain FED53_15625 PF03816 Cell envelope-related transcriptional attenuator domain FED53_15630 PF13614 AAA domain FED53_15635 PF13807 G-rich domain on putative tyrosine kinase FED53_15635 PF02706 Chain length determinant protein FED53_15645 PF00535 Glycosyl transferase family 2 FED53_15655 PF00534 Glycosyl transferases group 1 FED53_15655 PF13439 Glycosyltransferase Family 4 FED53_15660 PF02397 Bacterial sugar transferase FED53_15665 PF16363 GDP-mannose 4,6 dehydratase FED53_15670 PF01820 D-ala D-ala ligase N-terminus FED53_15670 PF07478 D-ala D-ala ligase C-terminus FED53_15675 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family FED53_15680 PF02719 Polysaccharide biosynthesis protein FED53_15685 PF00483 Nucleotidyl transferase FED53_15715 PF16363 GDP-mannose 4,6 dehydratase FED53_15740 PF00873 AcrB/AcrD/AcrF family FED53_15745 PF00440 Bacterial regulatory proteins, tetR family FED53_15755 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FED53_15755 PF00672 HAMP domain FED53_15755 PF12729 Four helix bundle sensory module for signal transduction FED53_15760 PF00877 NlpC/P60 family FED53_15775 PF00990 Diguanylate cyclase, GGDEF domain FED53_15775 PF00563 EAL domain FED53_15775 PF05231 MASE1 FED53_15775 PF08448 PAS fold FED53_15775 PF13426 PAS domain FED53_15775 PF08447 PAS fold FED53_15780 PF00933 Glycosyl hydrolase family 3 N terminal domain FED53_15780 PF01915 Glycosyl hydrolase family 3 C-terminal domain FED53_15785 PF13240 zinc-ribbon domain FED53_15795 PF13240 zinc-ribbon domain FED53_15800 PF01609 Transposase DDE domain FED53_15805 PF03611 PTS system sugar-specific permease component FED53_15815 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FED53_15820 PF06013 Proteins of 100 residues with WXG FED53_15825 PF00199 Catalase FED53_15825 PF06628 Catalase-related immune-responsive FED53_15840 PF00990 Diguanylate cyclase, GGDEF domain FED53_15840 PF05230 MASE2 domain FED53_15855 PF12327 FtsZ family, C-terminal domain FED53_15855 PF00091 Tubulin/FtsZ family, GTPase domain FED53_15860 PF13188 PAS domain FED53_15860 PF03707 Bacterial signalling protein N terminal repeat FED53_15860 PF00990 Diguanylate cyclase, GGDEF domain FED53_15860 PF00563 EAL domain FED53_15870 PF00005 ABC transporter FED53_15875 PF00392 Bacterial regulatory proteins, gntR family FED53_15880 PF05547 Immune inhibitor A peptidase M6 FED53_15890 PF04962 KduI/IolB family FED53_15895 PF01261 Xylose isomerase-like TIM barrel FED53_15900 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FED53_15900 PF00205 Thiamine pyrophosphate enzyme, central domain FED53_15900 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FED53_15905 PF00171 Aldehyde dehydrogenase family FED53_15910 PF00294 pfkB family carbohydrate kinase FED53_15915 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FED53_15915 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FED53_15920 PF07690 Major Facilitator Superfamily FED53_15925 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FED53_15925 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FED53_15930 PF00356 Bacterial regulatory proteins, lacI family FED53_15935 PF13407 Periplasmic binding protein domain FED53_15940 PF02653 Branched-chain amino acid transport system / permease component FED53_15945 PF00005 ABC transporter FED53_15970 PF01425 Amidase FED53_15990 PF07992 Pyridine nucleotide-disulphide oxidoreductase FED53_16005 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) FED53_16010 PF13396 Phospholipase_D-nuclease N-terminal FED53_16010 PF13091 PLD-like domain FED53_16020 PF01594 AI-2E family transporter FED53_16025 PF13419 Haloacid dehalogenase-like hydrolase FED53_16055 PF09587 Bacterial capsule synthesis protein PGA_cap FED53_16060 PF14102 Capsule biosynthesis CapC FED53_16065 PF08245 Mur ligase middle domain FED53_16075 PF00893 Small Multidrug Resistance protein FED53_16080 PF00893 Small Multidrug Resistance protein FED53_16085 PF02416 mttA/Hcf106 family FED53_16110 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FED53_16110 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FED53_16130 PF00313 'Cold-shock' DNA-binding domain FED53_16135 PF07969 Amidohydrolase family FED53_16140 PF00881 Nitroreductase family FED53_16155 PF03006 Haemolysin-III related FED53_16165 PF03773 Predicted permease FED53_16180 PF02626 Carboxyltransferase domain, subdomain A and B FED53_16185 PF02682 Carboxyltransferase domain, subdomain C and D FED53_16190 PF00392 Bacterial regulatory proteins, gntR family FED53_16190 PF07702 UTRA domain FED53_16195 PF00128 Alpha amylase, catalytic domain FED53_16195 PF16657 Maltogenic Amylase, C-terminal domain FED53_16200 PF02378 Phosphotransferase system, EIIC FED53_16200 PF00367 phosphotransferase system, EIIB FED53_16205 PF00892 EamA-like transporter family FED53_16210 PF13113 Protein of unknown function (DUF3970) FED53_16215 PF01202 Shikimate kinase FED53_16220 PF00860 Permease family FED53_16225 PF01979 Amidohydrolase family FED53_16250 PF13419 Haloacid dehalogenase-like hydrolase FED53_16255 PF00300 Histidine phosphatase superfamily (branch 1) FED53_16260 PF00258 Flavodoxin FED53_16275 PF09350 Domain of unknown function (DUF1992) FED53_16280 PF00512 His Kinase A (phospho-acceptor) domain FED53_16280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FED53_16280 PF00072 Response regulator receiver domain FED53_16280 PF09308 LuxQ, periplasmic FED53_16290 PF01261 Xylose isomerase-like TIM barrel FED53_16295 PF00528 Binding-protein-dependent transport system inner membrane component FED53_16300 PF00528 Binding-protein-dependent transport system inner membrane component FED53_16305 PF13416 Bacterial extracellular solute-binding protein FED53_16310 PF03990 G5-linked-Ubiquitin-like domain FED53_16310 PF06725 3D domain FED53_16310 PF07501 G5 domain FED53_16315 PF13407 Periplasmic binding protein domain FED53_16320 PF02653 Branched-chain amino acid transport system / permease component FED53_16325 PF00005 ABC transporter FED53_16330 PF05025 RbsD / FucU transport protein family FED53_16335 PF00294 pfkB family carbohydrate kinase FED53_16340 PF00356 Bacterial regulatory proteins, lacI family FED53_16345 PF00248 Aldo/keto reductase family FED53_16350 PF09339 IclR helix-turn-helix domain FED53_16350 PF01614 Bacterial transcriptional regulator FED53_16370 PF04341 Protein of unknown function, DUF485 FED53_16375 PF00474 Sodium:solute symporter family FED53_16390 PF01638 HxlR-like helix-turn-helix FED53_16400 PF09084 NMT1/THI5 like FED53_16405 PF00528 Binding-protein-dependent transport system inner membrane component FED53_16410 PF00005 ABC transporter FED53_16415 PF03070 TENA/THI-4/PQQC family FED53_16420 PF07687 Peptidase dimerisation domain FED53_16420 PF01546 Peptidase family M20/M25/M40 FED53_16425 PF13419 Haloacid dehalogenase-like hydrolase FED53_16430 PF00067 Cytochrome P450 FED53_16435 PF08241 Methyltransferase domain FED53_16440 PF05145 Transition state regulatory protein AbrB FED53_16445 PF03466 LysR substrate binding domain FED53_16445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FED53_16450 PF03401 Tripartite tricarboxylate transporter family receptor FED53_16455 PF00072 Response regulator receiver domain FED53_16455 PF12431 Transcriptional regulator FED53_16455 PF08279 HTH domain FED53_16460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FED53_16460 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain FED53_16465 PF03600 Citrate transporter FED53_16480 PF04703 FaeA-like protein FED53_16480 PF00072 Response regulator receiver domain FED53_16485 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain FED53_16485 PF17203 Single cache domain 3 FED53_16485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FED53_16490 PF03480 Bacterial extracellular solute-binding protein, family 7 FED53_16495 PF00375 Sodium:dicarboxylate symporter family FED53_16510 PF07486 Cell Wall Hydrolase FED53_16525 PF02687 FtsX-like permease family FED53_16525 PF12704 MacB-like periplasmic core domain FED53_16530 PF00005 ABC transporter FED53_16535 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FED53_16545 PF00355 Rieske [2Fe-2S] domain FED53_16550 PF03061 Thioesterase superfamily FED53_16565 PF07690 Major Facilitator Superfamily FED53_16570 PF01638 HxlR-like helix-turn-helix FED53_16575 PF09962 Uncharacterized conserved protein (DUF2196) FED53_16580 PF03009 Glycerophosphoryl diester phosphodiesterase family FED53_16585 PF02652 L-lactate permease FED53_16590 PF01557 Fumarylacetoacetate (FAA) hydrolase family FED53_16595 PF01274 Malate synthase FED53_16600 PF02913 FAD linked oxidases, C-terminal domain FED53_16600 PF01565 FAD binding domain FED53_16605 PF02754 Cysteine-rich domain FED53_16605 PF13183 4Fe-4S dicluster domain FED53_16610 PF01565 FAD binding domain FED53_16610 PF02913 FAD linked oxidases, C-terminal domain FED53_16615 PF00392 Bacterial regulatory proteins, gntR family FED53_16615 PF07729 FCD domain FED53_16620 PF01475 Ferric uptake regulator family FED53_16630 PF08281 Sigma-70, region 4 FED53_16630 PF04542 Sigma-70 region 2 FED53_16650 PF13536 Putative multidrug resistance efflux transporter FED53_16655 PF00392 Bacterial regulatory proteins, gntR family FED53_16655 PF07729 FCD domain FED53_16660 PF13426 PAS domain FED53_16660 PF01740 STAS domain FED53_16670 PF01226 Formate/nitrite transporter FED53_16675 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FED53_16680 PF00355 Rieske [2Fe-2S] domain FED53_16685 PF01077 Nitrite and sulphite reductase 4Fe-4S domain FED53_16685 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain FED53_16685 PF07992 Pyridine nucleotide-disulphide oxidoreductase FED53_16685 PF04324 BFD-like [2Fe-2S] binding domain FED53_16685 PF18267 Rubredoxin NAD+ reductase C-terminal domain FED53_16690 PF01297 Zinc-uptake complex component A periplasmic FED53_16695 PF00950 ABC 3 transport family FED53_16700 PF00005 ABC transporter FED53_16730 PF00230 Major intrinsic protein FED53_16735 PF01384 Phosphate transporter family FED53_16740 PF07690 Major Facilitator Superfamily FED53_16750 PF02492 CobW/HypB/UreG, nucleotide-binding domain FED53_16750 PF07683 Cobalamin synthesis protein cobW C-terminal domain FED53_16760 PF13847 Methyltransferase domain FED53_16765 PF01820 D-ala D-ala ligase N-terminus FED53_16765 PF07478 D-ala D-ala ligase C-terminus FED53_16790 PF00239 Resolvase, N terminal domain FED53_16790 PF02796 Helix-turn-helix domain of resolvase FED53_16795 PF13700 Domain of unknown function (DUF4158) FED53_16795 PF01526 Tn3 transposase DDE domain FED53_16800 PF05593 RHS Repeat FED53_16810 PF00326 Prolyl oligopeptidase family FED53_16810 PF07676 WD40-like Beta Propeller Repeat FED53_16815 PF07883 Cupin domain FED53_16835 PF13610 DDE domain FED53_16845 PF04463 Protein of unknown function (DUF523) FED53_16855 PF08240 Alcohol dehydrogenase GroES-like domain FED53_16855 PF00107 Zinc-binding dehydrogenase FED53_16865 PF01609 Transposase DDE domain FED53_16885 PF00082 Subtilase family FED53_16890 PF02796 Helix-turn-helix domain of resolvase FED53_16890 PF00665 Integrase core domain FED53_16895 PF01695 IstB-like ATP binding protein FED53_16905 PF13361 UvrD-like helicase C-terminal domain FED53_16905 PF00580 UvrD/REP helicase N-terminal domain FED53_16935 PF04002 RadC-like JAB domain FED53_16935 PF12826 Helix-hairpin-helix motif FED53_16945 PF01695 IstB-like ATP binding protein FED53_16985 PF00797 N-acetyltransferase FED53_16995 PF02447 GntP family permease FED53_17000 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FED53_17000 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FED53_17005 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain FED53_17005 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FED53_17010 PF01380 SIS domain FED53_17010 PF01418 Helix-turn-helix domain, rpiR family FED53_17025 PF04608 Phosphatidylglycerophosphatase A FED53_17035 PF00756 Putative esterase FED53_17045 PF13673 Acetyltransferase (GNAT) domain FED53_17060 PF04239 Protein of unknown function (DUF421) FED53_17070 PF00580 UvrD/REP helicase N-terminal domain FED53_17070 PF13361 UvrD-like helicase C-terminal domain FED53_17075 PF14069 Stage VI sporulation protein F FED53_17105 PF07098 Protein of unknown function (DUF1360) FED53_17120 PF02254 TrkA-N domain FED53_17120 PF02080 TrkA-C domain FED53_17120 PF00999 Sodium/hydrogen exchanger family FED53_17125 PF00571 CBS domain FED53_17125 PF03448 MgtE intracellular N domain FED53_17125 PF01769 Divalent cation transporter FED53_17130 PF00149 Calcineurin-like phosphoesterase FED53_17135 PF00849 RNA pseudouridylate synthase FED53_17140 PF01513 ATP-NAD kinase FED53_17145 PF04607 Region found in RelA / SpoT proteins FED53_17155 PF01928 CYTH domain FED53_17160 PF01464 Transglycosylase SLT domain FED53_17165 PF01152 Bacterial-like globin FED53_17175 PF08439 Oligopeptidase F FED53_17175 PF01432 Peptidase family M3 FED53_17185 PF13091 PLD-like domain FED53_17185 PF13396 Phospholipase_D-nuclease N-terminal FED53_17190 PF05389 Negative regulator of genetic competence (MecA) FED53_17195 PF03741 Integral membrane protein TerC family FED53_17200 PF03960 ArsC family FED53_17205 PF00529 HlyD membrane-fusion protein of T1SS FED53_17205 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FED53_17210 PF00873 AcrB/AcrD/AcrF family FED53_17215 PF13508 Acetyltransferase (GNAT) domain FED53_17220 PF00005 ABC transporter FED53_17220 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FED53_17225 PF00005 ABC transporter FED53_17225 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FED53_17230 PF12911 N-terminal TM domain of oligopeptide transport permease C FED53_17230 PF00528 Binding-protein-dependent transport system inner membrane component FED53_17235 PF00528 Binding-protein-dependent transport system inner membrane component FED53_17240 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FED53_17245 PF00579 tRNA synthetases class I (W and Y) FED53_17250 PF12227 Protein of unknown function (DUF3603) FED53_17255 PF10026 Predicted Zn-dependent protease (DUF2268) FED53_17260 PF02801 Beta-ketoacyl synthase, C-terminal domain FED53_17260 PF00109 Beta-ketoacyl synthase, N-terminal domain FED53_17265 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III FED53_17265 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal FED53_17275 PF10815 ComZ FED53_17295 PF08532 Beta-galactosidase trimerisation domain FED53_17295 PF02449 Beta-galactosidase FED53_17295 PF08533 Beta-galactosidase C-terminal domain FED53_17300 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain FED53_17300 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain FED53_17305 PF16363 GDP-mannose 4,6 dehydratase FED53_17310 PF00288 GHMP kinases N terminal domain FED53_17310 PF10509 Galactokinase galactose-binding signature FED53_17310 PF08544 GHMP kinases C terminal FED53_17315 PF12833 Helix-turn-helix domain FED53_17325 PF00474 Sodium:solute symporter family FED53_17330 PF10431 C-terminal, D2-small domain, of ClpB protein FED53_17330 PF02861 Clp amino terminal domain, pathogenicity island component FED53_17330 PF17871 AAA lid domain FED53_17330 PF00004 ATPase family associated with various cellular activities (AAA) FED53_17330 PF07724 AAA domain (Cdc48 subfamily) FED53_17335 PF14168 YjzC-like protein FED53_17340 PF02673 Bacitracin resistance protein BacA FED53_17350 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FED53_17350 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FED53_17355 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FED53_17355 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain FED53_17360 PF00117 Glutamine amidotransferase class-I FED53_17360 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain FED53_17365 PF00202 Aminotransferase class-III FED53_17370 PF00696 Amino acid kinase family FED53_17375 PF01960 ArgJ family FED53_17380 PF01118 Semialdehyde dehydrogenase, NAD binding domain FED53_17380 PF02774 Semialdehyde dehydrogenase, dimerisation domain FED53_17385 PF01883 Iron-sulfur cluster assembly protein FED53_17395 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 FED53_17395 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) FED53_17400 PF02645 Uncharacterised protein, DegV family COG1307 FED53_17410 PF13509 S1 domain FED53_17410 PF17783 CvfB-like winged helix domain FED53_17415 PF04461 Protein of unknown function (DUF520) FED53_17425 PF02954 Bacterial regulatory protein, Fis family FED53_17425 PF13426 PAS domain FED53_17425 PF00158 Sigma-54 interaction domain FED53_17430 PF01546 Peptidase family M20/M25/M40 FED53_17435 PF00202 Aminotransferase class-III FED53_17440 PF00171 Aldehyde dehydrogenase family FED53_17445 PF00356 Bacterial regulatory proteins, lacI family FED53_17445 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family FED53_17450 PF00128 Alpha amylase, catalytic domain FED53_17450 PF10438 Cyclo-malto-dextrinase C-terminal domain FED53_17450 PF09087 Cyclomaltodextrinase, N-terminal FED53_17455 PF00909 Ammonium Transporter Family FED53_17460 PF00543 Nitrogen regulatory protein P-II FED53_17470 PF00733 Asparagine synthase FED53_17470 PF13537 Glutamine amidotransferase domain FED53_17475 PF10949 Protein of unknown function (DUF2777) FED53_17480 PF07457 Protein of unknown function (DUF1516) FED53_17485 PF10676 Spore germination protein gerPA/gerPF FED53_17490 PF10803 Spore germination GerPB FED53_17495 PF10737 Spore germination protein GerPC FED53_17510 PF10676 Spore germination protein gerPA/gerPF FED53_17520 PF13476 AAA domain FED53_17525 PF12320 Type 5 capsule protein repressor C-terminal domain FED53_17525 PF00149 Calcineurin-like phosphoesterase FED53_17530 PF00580 UvrD/REP helicase N-terminal domain FED53_17530 PF13361 UvrD-like helicase C-terminal domain FED53_17530 PF12705 PD-(D/E)XK nuclease superfamily FED53_17535 PF12705 PD-(D/E)XK nuclease superfamily FED53_17545 PF09335 SNARE associated Golgi protein FED53_17615 PF00463 Isocitrate lyase family FED53_17620 PF01435 Peptidase family M48 FED53_17620 PF16491 CAAX prenyl protease N-terminal, five membrane helices FED53_17625 PF00378 Enoyl-CoA hydratase/isomerase FED53_17630 PF00501 AMP-binding enzyme FED53_17630 PF13193 AMP-binding enzyme C-terminal domain FED53_17635 PF03099 Biotin/lipoate A/B protein ligase family FED53_17635 PF10437 Bacterial lipoate protein ligase C-terminus FED53_17640 PF12706 Beta-lactamase superfamily domain FED53_17645 PF14149 YhfH-like protein FED53_17655 PF07662 Na+ dependent nucleoside transporter C-terminus FED53_17655 PF07670 Nucleoside recognition FED53_17655 PF01773 Na+ dependent nucleoside transporter N-terminus FED53_17660 PF17853 GGDEF-like domain FED53_17660 PF12833 Helix-turn-helix domain FED53_17665 PF06580 Histidine kinase FED53_17665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FED53_17665 PF00672 HAMP domain FED53_17665 PF02743 Cache domain FED53_17680 PF17932 Tetracyclin repressor-like, C-terminal domain FED53_17680 PF00440 Bacterial regulatory proteins, tetR family FED53_17695 PF01208 Uroporphyrinogen decarboxylase (URO-D) FED53_17700 PF00912 Transglycosylase FED53_17700 PF00905 Penicillin binding protein transpeptidase domain FED53_17705 PF03992 Antibiotic biosynthesis monooxygenase FED53_17720 PF01546 Peptidase family M20/M25/M40 FED53_17720 PF07687 Peptidase dimerisation domain FED53_17725 PF12787 EcsC protein family FED53_17730 PF05975 Bacterial ABC transporter protein EcsB FED53_17735 PF00005 ABC transporter FED53_17740 PF01230 HIT domain FED53_17745 PF13673 Acetyltransferase (GNAT) domain FED53_17750 PF00266 Aminotransferase class-V FED53_17755 PF17099 Tryptophan transporter TrpP FED53_17765 PF01047 MarR family FED53_17790 PF05698 Bacterial trigger factor protein (TF) C-terminus FED53_17795 PF14147 Sporulation protein YhaL FED53_17800 PF01336 OB-fold nucleic acid binding domain FED53_17800 PF01966 HD domain FED53_17810 PF13732 Domain of unknown function (DUF4162) FED53_17810 PF00005 ABC transporter FED53_17820 PF00216 Bacterial DNA-binding protein FED53_17825 PF00378 Enoyl-CoA hydratase/isomerase FED53_17830 PF13193 AMP-binding enzyme C-terminal domain FED53_17830 PF00501 AMP-binding enzyme FED53_17835 PF04055 Radical SAM superfamily FED53_17850 PF00005 ABC transporter FED53_17860 PF06133 Control of competence regulator ComK, YlbF/YmcA FED53_17870 PF14398 YheC/D like ATP-grasp FED53_17875 PF14398 YheC/D like ATP-grasp FED53_17880 PF14398 YheC/D like ATP-grasp FED53_17885 PF14398 YheC/D like ATP-grasp FED53_17895 PF13556 PucR C-terminal helix-turn-helix domain FED53_17900 PF03459 TOBE domain FED53_17900 PF17912 MalK OB fold domain FED53_17900 PF00005 ABC transporter FED53_17910 PF00269 Small, acid-soluble spore proteins, alpha/beta type FED53_17915 PF00571 CBS domain FED53_17915 PF03471 Transporter associated domain FED53_17915 PF01595 Cyclin M transmembrane N-terminal domain FED53_17920 PF13460 NAD(P)H-binding FED53_17925 PF08543 Phosphomethylpyrimidine kinase FED53_17930 PF00899 ThiF family FED53_17935 PF05690 Thiazole biosynthesis protein ThiG FED53_17945 PF01266 FAD dependent oxidoreductase FED53_17950 PF02581 Thiamine monophosphate synthase FED53_17960 PF00497 Bacterial extracellular solute-binding proteins, family 3 FED53_17965 PF00528 Binding-protein-dependent transport system inner membrane component FED53_17970 PF00005 ABC transporter FED53_17975 PF08240 Alcohol dehydrogenase GroES-like domain FED53_17975 PF00107 Zinc-binding dehydrogenase FED53_17980 PF04293 SpoVR like protein FED53_17985 PF14148 YhdB-like protein FED53_17990 PF02632 BioY family FED53_17995 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FED53_17995 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FED53_17995 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FED53_17995 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FED53_18000 PF16901 C-terminal domain of alpha-glycerophosphate oxidase FED53_18000 PF01266 FAD dependent oxidoreductase FED53_18005 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FED53_18005 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FED53_18010 PF00230 Major intrinsic protein FED53_18015 PF04309 Glycerol-3-phosphate responsive antiterminator FED53_18020 PF00795 Carbon-nitrogen hydrolase FED53_18020 PF00583 Acetyltransferase (GNAT) family FED53_18030 PF00849 RNA pseudouridylate synthase FED53_18030 PF01479 S4 domain FED53_18040 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FED53_18040 PF00672 HAMP domain FED53_18040 PF02743 Cache domain FED53_18045 PF16916 Dimerisation domain of Zinc Transporter FED53_18045 PF01545 Cation efflux family FED53_18050 PF03009 Glycerophosphoryl diester phosphodiesterase family FED53_18055 PF13416 Bacterial extracellular solute-binding protein FED53_18060 PF00528 Binding-protein-dependent transport system inner membrane component FED53_18065 PF00528 Binding-protein-dependent transport system inner membrane component FED53_18070 PF08402 TOBE domain FED53_18070 PF00005 ABC transporter FED53_18075 PF04309 Glycerol-3-phosphate responsive antiterminator FED53_18080 PF06968 Biotin and Thiamin Synthesis associated domain FED53_18080 PF04055 Radical SAM superfamily FED53_18085 PF00989 PAS fold FED53_18085 PF02954 Bacterial regulatory protein, Fis family FED53_18085 PF00158 Sigma-54 interaction domain FED53_18095 PF12787 EcsC protein family FED53_18100 PF09335 SNARE associated Golgi protein FED53_18110 PF00375 Sodium:dicarboxylate symporter family FED53_18115 PF02673 Bacitracin resistance protein BacA FED53_18120 PF05525 Branched-chain amino acid transport protein FED53_18130 PF01964 Radical SAM ThiC family FED53_18130 PF13667 ThiC-associated domain FED53_18145 PF03323 Bacillus/Clostridium GerA spore germination protein FED53_18150 PF02666 Phosphatidylserine decarboxylase FED53_18160 PF01047 MarR family FED53_18165 PF04285 Protein of unknown function (DUF444) FED53_18170 PF06798 PrkA serine protein kinase C-terminal domain FED53_18170 PF08298 PrkA AAA domain FED53_18175 PF00588 SpoU rRNA Methylase family FED53_18180 PF12671 Putative amidase domain FED53_18185 PF08331 Domain of unknown function (DUF1730) FED53_18200 PF06874 Firmicute fructose-1,6-bisphosphatase FED53_18300 PF18576 Helix-turn-helix domain FED53_18300 PF14540 Nucleotidyltransferase-like FED53_18305 PF11023 Zinc-ribbon containing domain FED53_18310 PF01475 Ferric uptake regulator family FED53_18315 PF00578 AhpC/TSA family FED53_18320 PF07885 Ion channel FED53_18335 PF00005 ABC transporter FED53_18340 PF00202 Aminotransferase class-III FED53_18345 PF06081 Aromatic acid exporter family member 1 FED53_18355 PF00005 ABC transporter FED53_18355 PF00664 ABC transporter transmembrane region FED53_18360 PF04167 Protein of unknown function (DUF402) FED53_18365 PF14182 YgaB-like protein FED53_18385 PF00730 HhH-GPD superfamily base excision DNA repair protein FED53_18385 PF14815 NUDIX domain FED53_18390 PF04307 LexA-binding, inner membrane-associated putative hydrolase FED53_18400 PF08176 Small acid-soluble spore protein K family FED53_18405 PF08838 Protein of unknown function (DUF1811) FED53_18410 PF00106 short chain dehydrogenase FED53_18415 PF02631 RecX family FED53_18435 PF01609 Transposase DDE domain FED53_18440 PF01370 NAD dependent epimerase/dehydratase family FED53_18440 PF08338 Domain of unknown function (DUF1731) FED53_18445 PF01979 Amidohydrolase family FED53_18445 PF00449 Urease alpha-subunit, N-terminal domain FED53_18465 PF02028 BCCT, betaine/carnitine/choline family transporter FED53_18475 PF00672 HAMP domain FED53_18475 PF17200 Single Cache domain 2 FED53_18475 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FED53_18480 PF00881 Nitroreductase family FED53_18485 PF10787 Uncharacterised protein from bacillus cereus group FED53_18490 PF01810 LysE type translocator FED53_18495 PF00881 Nitroreductase family FED53_18510 PF00486 Transcriptional regulatory protein, C terminal FED53_18510 PF00072 Response regulator receiver domain FED53_18515 PF00989 PAS fold FED53_18515 PF00512 His Kinase A (phospho-acceptor) domain FED53_18515 PF18698 Histidine kinase sensor domain FED53_18515 PF00672 HAMP domain FED53_18515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FED53_18520 PF02687 FtsX-like permease family FED53_18525 PF00005 ABC transporter FED53_18530 PF00324 Amino acid permease FED53_18555 PF00005 ABC transporter FED53_18560 PF00528 Binding-protein-dependent transport system inner membrane component FED53_18565 PF00497 Bacterial extracellular solute-binding proteins, family 3 FED53_18570 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) FED53_18570 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 FED53_18585 PF03551 Transcriptional regulator PadR-like family FED53_18620 PF00005 ABC transporter FED53_18630 PF01695 IstB-like ATP binding protein FED53_18635 PF00665 Integrase core domain FED53_18635 PF02796 Helix-turn-helix domain of resolvase FED53_18645 PF04397 LytTr DNA-binding domain FED53_18645 PF00072 Response regulator receiver domain FED53_18650 PF10502 Signal peptidase, peptidase S26 FED53_18660 PF03972 MmgE/PrpD family FED53_18665 PF00285 Citrate synthase, C-terminal domain FED53_18685 PF00293 NUDIX domain FED53_18710 PF01965 DJ-1/PfpI family FED53_18720 PF00296 Luciferase-like monooxygenase FED53_18735 PF03992 Antibiotic biosynthesis monooxygenase FED53_18750 PF00255 Glutathione peroxidase FED53_18755 PF01207 Dihydrouridine synthase (Dus) FED53_18770 PF00440 Bacterial regulatory proteins, tetR family FED53_18780 PF03591 AzlC protein FED53_18795 PF01588 Putative tRNA binding domain FED53_18800 PF00892 EamA-like transporter family FED53_18805 PF12833 Helix-turn-helix domain FED53_18805 PF07883 Cupin domain FED53_18810 PF02595 Glycerate kinase family FED53_18815 PF02447 GntP family permease FED53_18820 PF13556 PucR C-terminal helix-turn-helix domain FED53_18820 PF17853 GGDEF-like domain FED53_18820 PF05651 Putative sugar diacid recognition FED53_18825 PF03466 LysR substrate binding domain FED53_18825 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FED53_18830 PF07690 Major Facilitator Superfamily FED53_18840 PF13443 Cro/C1-type HTH DNA-binding domain FED53_18845 PF11188 Protein of unknown function (DUF2975) FED53_18850 PF00571 CBS domain FED53_18850 PF01595 Cyclin M transmembrane N-terminal domain FED53_18850 PF03471 Transporter associated domain FED53_18875 PF01938 TRAM domain FED53_18875 PF05958 tRNA (Uracil-5-)-methyltransferase FED53_18880 PF01522 Polysaccharide deacetylase FED53_18885 PF05681 Fumarate hydratase (Fumerase) FED53_18885 PF05683 Fumarase C-terminus FED53_18900 PF04055 Radical SAM superfamily FED53_18900 PF08756 YfkB-like domain FED53_18905 PF14167 YfkD-like protein FED53_18910 PF01699 Sodium/calcium exchanger protein FED53_18915 PF16242 Pyridoxamine 5'-phosphate oxidase like FED53_18920 PF00128 Alpha amylase, catalytic domain FED53_18920 PF09154 Domain of unknown function (DUF1939) FED53_18925 PF01263 Aldose 1-epimerase FED53_18960 PF07690 Major Facilitator Superfamily FED53_18965 PF16916 Dimerisation domain of Zinc Transporter FED53_18965 PF01545 Cation efflux family FED53_18970 PF01022 Bacterial regulatory protein, arsR family FED53_18985 PF03631 Virulence factor BrkB FED53_18995 PF01451 Low molecular weight phosphotyrosine protein phosphatase FED53_19000 PF06569 Protein of unknown function (DUF1128) FED53_19005 PF13382 Adenine deaminase C-terminal domain FED53_19005 PF01979 Amidohydrolase family FED53_19010 PF00188 Cysteine-rich secretory protein family FED53_19020 PF01965 DJ-1/PfpI family FED53_19025 PF01235 Sodium:alanine symporter family FED53_19035 PF00175 Oxidoreductase NAD-binding domain FED53_19035 PF00970 Oxidoreductase FAD-binding domain FED53_19035 PF00042 Globin FED53_19040 PF02082 Transcriptional regulator FED53_19045 PF02898 Nitric oxide synthase, oxygenase domain FED53_19050 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FED53_19055 PF12848 ABC transporter FED53_19055 PF00005 ABC transporter FED53_19070 PF01625 Peptide methionine sulfoxide reductase FED53_19075 PF00686 Starch binding domain FED53_19075 PF01373 Glycosyl hydrolase family 14 FED53_19080 PF04231 Endonuclease I FED53_19100 PF12538 DNA transporter FED53_19100 PF01580 FtsK/SpoIIIE family FED53_19105 PF10140 WXG100 protein secretion system (Wss), protein YukC FED53_19110 PF08817 WXG100 protein secretion system (Wss), protein YukD FED53_19115 PF06013 Proteins of 100 residues with WXG FED53_19125 PF04740 LXG domain of WXG superfamily FED53_19125 PF14436 Bacterial EndoU nuclease FED53_19135 PF00270 DEAD/DEAH box helicase FED53_19135 PF00271 Helicase conserved C-terminal domain FED53_19150 PF04235 Protein of unknown function (DUF418) FED53_19155 PF00989 PAS fold FED53_19155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FED53_19155 PF00512 His Kinase A (phospho-acceptor) domain FED53_19160 PF17203 Single cache domain 3 FED53_19160 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain FED53_19160 PF00989 PAS fold FED53_19160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FED53_19165 PF01544 CorA-like Mg2+ transporter protein FED53_19175 PF01235 Sodium:alanine symporter family FED53_19190 PF01965 DJ-1/PfpI family FED53_19195 PF00072 Response regulator receiver domain FED53_19195 PF00486 Transcriptional regulatory protein, C terminal FED53_19200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FED53_19200 PF00672 HAMP domain FED53_19200 PF00512 His Kinase A (phospho-acceptor) domain FED53_19215 PF13539 D-alanyl-D-alanine carboxypeptidase FED53_19225 PF03060 Nitronate monooxygenase FED53_19230 PF10282 Lactonase, 7-bladed beta-propeller FED53_19235 PF00557 Metallopeptidase family M24 FED53_19240 PF00512 His Kinase A (phospho-acceptor) domain FED53_19240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FED53_19240 PF00989 PAS fold FED53_19245 PF02608 ABC transporter substrate-binding protein PnrA-like FED53_19250 PF12728 Helix-turn-helix domain FED53_19255 PF00849 RNA pseudouridylate synthase FED53_19255 PF01479 S4 domain FED53_19265 PF00528 Binding-protein-dependent transport system inner membrane component FED53_19270 PF00528 Binding-protein-dependent transport system inner membrane component FED53_19275 PF12849 PBP superfamily domain FED53_19280 PF13847 Methyltransferase domain FED53_19280 PF01938 TRAM domain FED53_19280 PF05958 tRNA (Uracil-5-)-methyltransferase FED53_19285 PF00781 Diacylglycerol kinase catalytic domain FED53_19290 PF02637 GatB domain FED53_19290 PF02934 GatB/GatE catalytic domain FED53_19295 PF01425 Amidase FED53_19300 PF02686 Glu-tRNAGln amidotransferase C subunit FED53_19310 PF07537 CamS sex pheromone cAM373 precursor FED53_19315 PF00533 BRCA1 C Terminus (BRCT) domain FED53_19315 PF01653 NAD-dependent DNA ligase adenylation domain FED53_19315 PF03119 NAD-dependent DNA ligase C4 zinc finger domain FED53_19315 PF12826 Helix-hairpin-helix motif FED53_19315 PF03120 NAD-dependent DNA ligase OB-fold domain FED53_19320 PF00580 UvrD/REP helicase N-terminal domain FED53_19320 PF13361 UvrD-like helicase C-terminal domain FED53_19325 PF01884 PcrB family FED53_19330 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FED53_19330 PF03129 Anticodon binding domain FED53_19335 PF01371 Trp repressor protein FED53_19340 PF01979 Amidohydrolase family FED53_19340 PF13382 Adenine deaminase C-terminal domain FED53_19350 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain FED53_19350 PF02843 Phosphoribosylglycinamide synthetase, C domain FED53_19350 PF02844 Phosphoribosylglycinamide synthetase, N domain FED53_19355 PF02142 MGS-like domain FED53_19355 PF01808 AICARFT/IMPCHase bienzyme FED53_19360 PF00551 Formyl transferase FED53_19365 PF00586 AIR synthase related protein, N-terminal domain FED53_19365 PF02769 AIR synthase related protein, C-terminal domain FED53_19370 PF00156 Phosphoribosyl transferase domain FED53_19375 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain FED53_19375 PF02769 AIR synthase related protein, C-terminal domain FED53_19375 PF00586 AIR synthase related protein, N-terminal domain FED53_19385 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase FED53_19390 PF01259 SAICAR synthetase FED53_19395 PF10397 Adenylosuccinate lyase C-terminus FED53_19395 PF00206 Lyase FED53_19400 PF02222 ATP-grasp domain FED53_19400 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain FED53_19405 PF00731 AIR carboxylase FED53_19410 PF14044 NETI protein FED53_19435 PF00860 Permease family FED53_19440 PF02540 NAD synthase FED53_19440 PF00958 GMP synthase C terminal domain FED53_19440 PF00117 Glutamine amidotransferase class-I FED53_19445 PF13559 Domain of unknown function (DUF4129) FED53_19445 PF11992 Domain of unknown function (DUF3488) FED53_19445 PF01841 Transglutaminase-like superfamily FED53_19450 PF01882 Protein of unknown function DUF58 FED53_19455 PF07726 ATPase family associated with various cellular activities (AAA) FED53_19455 PF17863 AAA lid domain FED53_19465 PF01638 HxlR-like helix-turn-helix FED53_19475 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FED53_19475 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain FED53_19480 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain FED53_19480 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain FED53_19490 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family FED53_19500 PF00106 short chain dehydrogenase FED53_19515 PF00118 TCP-1/cpn60 chaperonin family FED53_19520 PF00166 Chaperonin 10 Kd subunit FED53_19525 PF02517 CPBP intramembrane metalloprotease FED53_19535 PF00902 Sec-independent protein translocase protein (TatC) FED53_19540 PF02416 mttA/Hcf106 family FED53_19545 PF02629 CoA binding domain FED53_19545 PF06971 Putative DNA-binding protein N-terminus FED53_19550 PF00005 ABC transporter FED53_19550 PF16326 ABC transporter C-terminal domain FED53_19550 PF12848 ABC transporter FED53_19555 PF00814 Glycoprotease family FED53_19560 PF00583 Acetyltransferase (GNAT) family FED53_19565 PF00814 Glycoprotease family FED53_19570 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE FED53_19655 PF17283 SprT-like zinc ribbon domain FED53_19655 PF10263 SprT-like family FED53_19665 PF09371 Tex-like protein N-terminal domain FED53_19665 PF17674 HHH domain FED53_19665 PF00575 S1 RNA binding domain FED53_19665 PF16921 Tex protein YqgF-like domain FED53_19670 PF07228 Stage II sporulation protein E (SpoIIE) FED53_19675 PF04545 Sigma-70, region 4 FED53_19675 PF04539 Sigma-70 region 3 FED53_19675 PF04542 Sigma-70 region 2 FED53_19680 PF13581 Histidine kinase-like ATPase domain FED53_19685 PF01740 STAS domain FED53_19690 PF07228 Stage II sporulation protein E (SpoIIE) FED53_19690 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain FED53_19695 PF13581 Histidine kinase-like ATPase domain FED53_19700 PF01740 STAS domain FED53_19705 PF08678 Rsbr N terminal FED53_19705 PF01740 STAS domain FED53_19710 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system FED53_19715 PF01402 Ribbon-helix-helix protein, copG family FED53_19720 PF01168 Alanine racemase, N-terminal domain FED53_19720 PF00842 Alanine racemase, C-terminal domain FED53_19730 PF01648 4'-phosphopantetheinyl transferase superfamily FED53_19735 PF01694 Rhomboid family FED53_19740 PF03851 UV-endonuclease UvdE FED53_19745 PF00270 DEAD/DEAH box helicase FED53_19745 PF00271 Helicase conserved C-terminal domain FED53_19750 PF08245 Mur ligase middle domain FED53_19750 PF02875 Mur ligase family, glutamate ligase domain FED53_19750 PF01225 Mur ligase family, catalytic domain FED53_19755 PF07478 D-ala D-ala ligase C-terminus FED53_19755 PF01820 D-ala D-ala ligase N-terminus FED53_19765 PF13416 Bacterial extracellular solute-binding protein FED53_19770 PF00528 Binding-protein-dependent transport system inner membrane component FED53_19775 PF00528 Binding-protein-dependent transport system inner membrane component FED53_19780 PF08402 TOBE domain FED53_19780 PF00005 ABC transporter FED53_19790 PF03306 Alpha-acetolactate decarboxylase FED53_19800 PF08125 Mannitol dehydrogenase C-terminal domain FED53_19800 PF01232 Mannitol dehydrogenase Rossmann domain FED53_19805 PF00874 PRD domain FED53_19805 PF08279 HTH domain FED53_19805 PF05043 Mga helix-turn-helix domain FED53_19805 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FED53_19805 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FED53_19810 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FED53_19810 PF02378 Phosphotransferase system, EIIC FED53_19810 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FED53_19820 PF02589 LUD domain FED53_19825 PF13183 4Fe-4S dicluster domain FED53_19825 PF02589 LUD domain FED53_19825 PF11870 Domain of unknown function (DUF3390) FED53_19830 PF02754 Cysteine-rich domain FED53_19835 PF00392 Bacterial regulatory proteins, gntR family FED53_19835 PF07729 FCD domain FED53_19840 PF02652 L-lactate permease FED53_19845 PF00005 ABC transporter FED53_19850 PF07690 Major Facilitator Superfamily FED53_19860 PF01381 Helix-turn-helix FED53_19865 PF01554 MatE FED53_19875 PF01380 SIS domain FED53_19880 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FED53_19880 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FED53_19880 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FED53_19880 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FED53_19885 PF07949 YbbR-like protein FED53_19890 PF02457 DisA bacterial checkpoint controller nucleotide-binding FED53_19895 PF13490 Putative zinc-finger FED53_19900 PF08281 Sigma-70, region 4 FED53_19900 PF04542 Sigma-70 region 2 FED53_19910 PF00491 Arginase family FED53_19975 PF01522 Polysaccharide deacetylase FED53_19980 PF14089 KinB-signalling pathway activation in sporulation FED53_19985 PF17898 Spore germination GerD central core domain FED53_19990 PF10609 NUBPL iron-transfer P-loop NTPase FED53_19995 PF01520 N-acetylmuramoyl-L-alanine amidase FED53_20005 PF00380 Ribosomal protein S9/S16 FED53_20010 PF00572 Ribosomal protein L13 FED53_20015 PF01416 tRNA pseudouridine synthase FED53_20025 PF00005 ABC transporter FED53_20030 PF00005 ABC transporter FED53_20035 PF01196 Ribosomal protein L17 FED53_20040 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain FED53_20040 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain FED53_20040 PF01000 RNA polymerase Rpb3/RpoA insert domain FED53_20045 PF00411 Ribosomal protein S11 FED53_20050 PF00416 Ribosomal protein S13/S18 FED53_20055 PF00444 Ribosomal protein L36 FED53_20060 PF01176 Translation initiation factor 1A / IF-1 FED53_20065 PF00557 Metallopeptidase family M24 FED53_20070 PF05191 Adenylate kinase, active site lid FED53_20075 PF00344 SecY translocase FED53_20080 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A FED53_20085 PF00327 Ribosomal protein L30p/L7e FED53_20090 PF03719 Ribosomal protein S5, C-terminal domain FED53_20090 PF00333 Ribosomal protein S5, N-terminal domain FED53_20095 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast FED53_20100 PF00347 Ribosomal protein L6 FED53_20105 PF00410 Ribosomal protein S8 FED53_20110 PF00253 Ribosomal protein S14p/S29e FED53_20115 PF00673 ribosomal L5P family C-terminus FED53_20115 PF00281 Ribosomal protein L5 FED53_20120 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 FED53_20120 PF00467 KOW motif FED53_20125 PF00238 Ribosomal protein L14p/L23e FED53_20130 PF00366 Ribosomal protein S17 FED53_20135 PF00831 Ribosomal L29 protein FED53_20140 PF00252 Ribosomal protein L16p/L10e FED53_20145 PF07650 KH domain FED53_20145 PF00189 Ribosomal protein S3, C-terminal domain FED53_20150 PF00237 Ribosomal protein L22p/L17e FED53_20155 PF00203 Ribosomal protein S19 FED53_20160 PF03947 Ribosomal Proteins L2, C-terminal domain FED53_20160 PF00181 Ribosomal Proteins L2, RNA binding domain FED53_20165 PF00276 Ribosomal protein L23 FED53_20170 PF00573 Ribosomal protein L4/L1 family FED53_20175 PF00297 Ribosomal protein L3 FED53_20180 PF00338 Ribosomal protein S10p/S20e FED53_20185 PF00009 Elongation factor Tu GTP binding domain FED53_20185 PF03144 Elongation factor Tu domain 2 FED53_20185 PF03143 Elongation factor Tu C-terminal domain FED53_20190 PF03144 Elongation factor Tu domain 2 FED53_20190 PF00009 Elongation factor Tu GTP binding domain FED53_20190 PF03764 Elongation factor G, domain IV FED53_20190 PF14492 Elongation Factor G, domain II FED53_20190 PF00679 Elongation factor G C-terminus FED53_20195 PF00177 Ribosomal protein S7p/S5e FED53_20200 PF00164 Ribosomal protein S12/S23 FED53_20205 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family FED53_20210 PF04997 RNA polymerase Rpb1, domain 1 FED53_20210 PF04998 RNA polymerase Rpb1, domain 5 FED53_20210 PF05000 RNA polymerase Rpb1, domain 4 FED53_20210 PF00623 RNA polymerase Rpb1, domain 2 FED53_20210 PF04983 RNA polymerase Rpb1, domain 3 FED53_20215 PF04561 RNA polymerase Rpb2, domain 2 FED53_20215 PF04565 RNA polymerase Rpb2, domain 3 FED53_20215 PF10385 RNA polymerase beta subunit external 1 domain FED53_20215 PF00562 RNA polymerase Rpb2, domain 6 FED53_20215 PF04560 RNA polymerase Rpb2, domain 7 FED53_20215 PF04563 RNA polymerase beta subunit FED53_20220 PF05175 Methyltransferase small domain FED53_20230 PF00466 Ribosomal protein L10 FED53_20235 PF00687 Ribosomal protein L1p/L10e family FED53_20240 PF03946 Ribosomal protein L11, N-terminal domain FED53_20240 PF00298 Ribosomal protein L11, RNA binding domain FED53_20245 PF00467 KOW motif FED53_20245 PF02357 Transcription termination factor nusG FED53_20250 PF00584 SecE/Sec61-gamma subunits of protein translocation complex FED53_20255 PF00471 Ribosomal protein L33 FED53_20260 PF08281 Sigma-70, region 4 FED53_20260 PF04542 Sigma-70 region 2 FED53_20265 PF05991 YacP-like NYN domain FED53_20270 PF08032 RNA 2'-O ribose methyltransferase substrate binding FED53_20270 PF00588 SpoU rRNA Methylase family FED53_20275 PF00636 Ribonuclease III domain FED53_20280 PF09190 DALR domain FED53_20280 PF01406 tRNA synthetases class I (C) catalytic domain FED53_20285 PF06426 Serine acetyltransferase, N-terminal FED53_20285 PF00132 Bacterial transferase hexapeptide (six repeats) FED53_20290 PF00749 tRNA synthetases class I (E and Q), catalytic domain FED53_20295 PF02542 YgbB family FED53_20300 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase FED53_20310 PF02457 DisA bacterial checkpoint controller nucleotide-binding FED53_20310 PF10635 DisA bacterial checkpoint controller linker region FED53_20315 PF18073 Rubredoxin metal binding domain FED53_20320 PF00004 ATPase family associated with various cellular activities (AAA) FED53_20320 PF10431 C-terminal, D2-small domain, of ClpB protein FED53_20320 PF02861 Clp amino terminal domain, pathogenicity island component FED53_20320 PF17871 AAA lid domain FED53_20320 PF07724 AAA domain (Cdc48 subfamily) FED53_20325 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain FED53_20330 PF02151 UvrB/uvrC motif FED53_20335 PF05848 CtsR N-terminal HTH domain FED53_20335 PF17727 CtsR C-terminal dimerization domain FED53_20355 PF00128 Alpha amylase, catalytic domain FED53_20355 PF17999 Pullulanase N1-terminal domain FED53_20355 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FED53_20360 PF00152 tRNA synthetases class II (D, K and N) FED53_20360 PF01336 OB-fold nucleic acid binding domain FED53_20365 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) FED53_20370 PF02152 Dihydroneopterin aldolase FED53_20375 PF00809 Pterin binding enzyme FED53_20380 PF01063 Amino-transferase class IV FED53_20385 PF00117 Glutamine amidotransferase class-I FED53_20390 PF04715 Anthranilate synthase component I, N terminal region FED53_20390 PF00425 chorismate binding enzyme FED53_20395 PF00291 Pyridoxal-phosphate dependent enzyme FED53_20400 PF01430 Hsp33 protein FED53_20405 PF03309 Type III pantothenate kinase FED53_20410 PF01434 Peptidase family M41 FED53_20410 PF06480 FtsH Extracellular FED53_20410 PF17862 AAA+ lid domain FED53_20410 PF00004 ATPase family associated with various cellular activities (AAA) FED53_20420 PF01171 PP-loop family FED53_20420 PF11734 TilS substrate C-terminal domain FED53_20420 PF09179 TilS substrate binding domain FED53_20425 PF00069 Protein kinase domain FED53_20430 PF00092 von Willebrand factor type A domain FED53_20435 PF07228 Stage II sporulation protein E (SpoIIE) FED53_20450 PF00575 S1 RNA binding domain FED53_20455 PF04977 Septum formation initiator FED53_20460 PF09578 Spore cortex protein YabQ (Spore_YabQ) FED53_20465 PF07873 YabP family FED53_20470 PF01479 S4 domain FED53_20475 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FED53_20475 PF03819 MazG nucleotide pyrophosphohydrolase domain FED53_20480 PF14667 Polysaccharide biosynthesis C-terminal domain FED53_20480 PF01943 Polysaccharide biosynthesis protein FED53_20485 PF15714 Stage V sporulation protein T C-terminal, transcription factor FED53_20485 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin FED53_20490 PF17757 UvrB interaction domain FED53_20490 PF03461 TRCF domain FED53_20490 PF00271 Helicase conserved C-terminal domain FED53_20490 PF00270 DEAD/DEAH box helicase FED53_20490 PF02559 CarD-like/TRCF domain FED53_20495 PF10955 Protein of unknown function (DUF2757) FED53_20500 PF01195 Peptidyl-tRNA hydrolase FED53_20505 PF14693 Ribosomal protein TL5, C-terminal domain FED53_20505 PF01386 Ribosomal L25p family FED53_20510 PF14572 Phosphoribosyl synthetase-associated domain FED53_20510 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase FED53_20515 PF00132 Bacterial transferase hexapeptide (six repeats) FED53_20515 PF00483 Nucleotidyl transferase FED53_20520 PF04026 SpoVG FED53_20525 PF01042 Endoribonuclease L-PSP FED53_20530 PF00156 Phosphoribosyl transferase domain FED53_20530 PF09182 Bacterial purine repressor, N-terminal FED53_20535 PF00288 GHMP kinases N terminal domain FED53_20535 PF08544 GHMP kinases C terminal FED53_20540 PF00269 Small, acid-soluble spore proteins, alpha/beta type FED53_20545 PF06257 Biofilm formation stimulator VEG FED53_20550 PF05582 YabG peptidase U57 FED53_20555 PF00398 Ribosomal RNA adenine dimethylase FED53_20560 PF13331 Domain of unknown function (DUF4093) FED53_20560 PF13662 Toprim domain FED53_20565 PF01026 TatD related DNase FED53_20570 PF08264 Anticodon-binding domain of tRNA FED53_20570 PF09334 tRNA synthetases class I (M) FED53_20570 PF01588 Putative tRNA binding domain FED53_20575 PF18277 AbrB C-terminal domain FED53_20575 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin FED53_20580 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FED53_20585 PF01541 GIY-YIG catalytic domain FED53_20590 PF05175 Methyltransferase small domain FED53_20595 PF06156 Initiation control protein YabA FED53_20600 PF04468 PSP1 C-terminal conserved region FED53_20605 PF09115 DNA polymerase III, delta subunit, C terminal FED53_20610 PF06153 Cyclic-di-AMP receptor FED53_20615 PF02223 Thymidylate kinase FED53_20620 PF01276 Orn/Lys/Arg decarboxylase, major domain FED53_20620 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain