locus-tag class description BC359_00040 PF01522 Polysaccharide deacetylase BC359_00045 PF14089 KinB-signalling pathway activation in sporulation BC359_00050 PF17898 Spore germination GerD central core domain BC359_00055 PF10609 NUBPL iron-transfer P-loop NTPase BC359_00060 PF01520 N-acetylmuramoyl-L-alanine amidase BC359_00080 PF01693 Caulimovirus viroplasmin BC359_00085 PF11867 Domain of unknown function (DUF3387) BC359_00085 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) BC359_00085 PF18766 SWI2/SNF2 ATPase BC359_00090 PF01420 Type I restriction modification DNA specificity domain BC359_00095 PF02384 N-6 DNA Methylase BC359_00100 PF01695 IstB-like ATP binding protein BC359_00130 PF00589 Phage integrase family BC359_00130 PF14659 Phage integrase, N-terminal SAM-like domain BC359_00135 PF00380 Ribosomal protein S9/S16 BC359_00140 PF00572 Ribosomal protein L13 BC359_00145 PF01416 tRNA pseudouridine synthase BC359_00150 PF02361 Cobalt transport protein BC359_00155 PF00005 ABC transporter BC359_00160 PF00005 ABC transporter BC359_00165 PF01196 Ribosomal protein L17 BC359_00170 PF01000 RNA polymerase Rpb3/RpoA insert domain BC359_00170 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain BC359_00170 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain BC359_00175 PF00411 Ribosomal protein S11 BC359_00180 PF00416 Ribosomal protein S13/S18 BC359_00185 PF00444 Ribosomal protein L36 BC359_00190 PF01176 Translation initiation factor 1A / IF-1 BC359_00195 PF00557 Metallopeptidase family M24 BC359_00200 PF05191 Adenylate kinase, active site lid BC359_00205 PF00344 SecY translocase BC359_00210 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A BC359_00215 PF00327 Ribosomal protein L30p/L7e BC359_00220 PF00333 Ribosomal protein S5, N-terminal domain BC359_00220 PF03719 Ribosomal protein S5, C-terminal domain BC359_00225 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast BC359_00230 PF00347 Ribosomal protein L6 BC359_00235 PF00410 Ribosomal protein S8 BC359_00240 PF00253 Ribosomal protein S14p/S29e BC359_00245 PF00673 ribosomal L5P family C-terminus BC359_00245 PF00281 Ribosomal protein L5 BC359_00250 PF00467 KOW motif BC359_00250 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 BC359_00255 PF00238 Ribosomal protein L14p/L23e BC359_00260 PF00366 Ribosomal protein S17 BC359_00265 PF00831 Ribosomal L29 protein BC359_00270 PF00252 Ribosomal protein L16p/L10e BC359_00275 PF07650 KH domain BC359_00275 PF00189 Ribosomal protein S3, C-terminal domain BC359_00280 PF00237 Ribosomal protein L22p/L17e BC359_00285 PF00203 Ribosomal protein S19 BC359_00290 PF03947 Ribosomal Proteins L2, C-terminal domain BC359_00290 PF00181 Ribosomal Proteins L2, RNA binding domain BC359_00295 PF00276 Ribosomal protein L23 BC359_00300 PF00573 Ribosomal protein L4/L1 family BC359_00305 PF00297 Ribosomal protein L3 BC359_00310 PF00338 Ribosomal protein S10p/S20e BC359_00315 PF00009 Elongation factor Tu GTP binding domain BC359_00315 PF03144 Elongation factor Tu domain 2 BC359_00315 PF03143 Elongation factor Tu C-terminal domain BC359_00320 PF00009 Elongation factor Tu GTP binding domain BC359_00320 PF14492 Elongation Factor G, domain II BC359_00320 PF03764 Elongation factor G, domain IV BC359_00320 PF00679 Elongation factor G C-terminus BC359_00320 PF03144 Elongation factor Tu domain 2 BC359_00325 PF00177 Ribosomal protein S7p/S5e BC359_00330 PF00164 Ribosomal protein S12/S23 BC359_00335 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family BC359_00340 PF05000 RNA polymerase Rpb1, domain 4 BC359_00340 PF00623 RNA polymerase Rpb1, domain 2 BC359_00340 PF04997 RNA polymerase Rpb1, domain 1 BC359_00340 PF04983 RNA polymerase Rpb1, domain 3 BC359_00340 PF04998 RNA polymerase Rpb1, domain 5 BC359_00345 PF00562 RNA polymerase Rpb2, domain 6 BC359_00345 PF10385 RNA polymerase beta subunit external 1 domain BC359_00345 PF04561 RNA polymerase Rpb2, domain 2 BC359_00345 PF04563 RNA polymerase beta subunit BC359_00345 PF04565 RNA polymerase Rpb2, domain 3 BC359_00345 PF04560 RNA polymerase Rpb2, domain 7 BC359_00350 PF05175 Methyltransferase small domain BC359_00360 PF00466 Ribosomal protein L10 BC359_00365 PF00687 Ribosomal protein L1p/L10e family BC359_00370 PF03946 Ribosomal protein L11, N-terminal domain BC359_00370 PF00298 Ribosomal protein L11, RNA binding domain BC359_00375 PF02357 Transcription termination factor nusG BC359_00375 PF00467 KOW motif BC359_00380 PF00584 SecE/Sec61-gamma subunits of protein translocation complex BC359_00385 PF00471 Ribosomal protein L33 BC359_00390 PF08281 Sigma-70, region 4 BC359_00390 PF04542 Sigma-70 region 2 BC359_00395 PF05991 YacP-like NYN domain BC359_00405 PF00636 Ribonuclease III domain BC359_00410 PF09190 DALR domain BC359_00410 PF01406 tRNA synthetases class I (C) catalytic domain BC359_00415 PF06426 Serine acetyltransferase, N-terminal BC359_00415 PF00132 Bacterial transferase hexapeptide (six repeats) BC359_00420 PF00749 tRNA synthetases class I (E and Q), catalytic domain BC359_00425 PF02542 YgbB family BC359_00430 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase BC359_00440 PF02457 DisA bacterial checkpoint controller nucleotide-binding BC359_00440 PF10635 DisA bacterial checkpoint controller linker region BC359_00445 PF18073 Rubredoxin metal binding domain BC359_00450 PF10431 C-terminal, D2-small domain, of ClpB protein BC359_00450 PF02861 Clp amino terminal domain, pathogenicity island component BC359_00450 PF17871 AAA lid domain BC359_00450 PF07724 AAA domain (Cdc48 subfamily) BC359_00450 PF00004 ATPase family associated with various cellular activities (AAA) BC359_00455 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain BC359_00460 PF02151 UvrB/uvrC motif BC359_00465 PF17727 CtsR C-terminal dimerization domain BC359_00465 PF05848 CtsR N-terminal HTH domain BC359_00485 PF17999 Pullulanase N1-terminal domain BC359_00485 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BC359_00485 PF00128 Alpha amylase, catalytic domain BC359_00490 PF00152 tRNA synthetases class II (D, K and N) BC359_00490 PF01336 OB-fold nucleic acid binding domain BC359_00495 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) BC359_00500 PF02152 Dihydroneopterin aldolase BC359_00505 PF00809 Pterin binding enzyme BC359_00510 PF01063 Amino-transferase class IV BC359_00515 PF00117 Glutamine amidotransferase class-I BC359_00520 PF04715 Anthranilate synthase component I, N terminal region BC359_00520 PF00425 chorismate binding enzyme BC359_00525 PF00291 Pyridoxal-phosphate dependent enzyme BC359_00530 PF01430 Hsp33 protein BC359_00535 PF03309 Type III pantothenate kinase BC359_00540 PF01434 Peptidase family M41 BC359_00540 PF17862 AAA+ lid domain BC359_00540 PF06480 FtsH Extracellular BC359_00540 PF00004 ATPase family associated with various cellular activities (AAA) BC359_00550 PF11734 TilS substrate C-terminal domain BC359_00550 PF09179 TilS substrate binding domain BC359_00550 PF01171 PP-loop family BC359_00555 PF00069 Protein kinase domain BC359_00560 PF00092 von Willebrand factor type A domain BC359_00580 PF00575 S1 RNA binding domain BC359_00585 PF04977 Septum formation initiator BC359_00590 PF09578 Spore cortex protein YabQ (Spore_YabQ) BC359_00595 PF07873 YabP family BC359_00600 PF01479 S4 domain BC359_00605 PF03819 MazG nucleotide pyrophosphohydrolase domain BC359_00605 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BC359_00610 PF14667 Polysaccharide biosynthesis C-terminal domain BC359_00610 PF01943 Polysaccharide biosynthesis protein BC359_00615 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin BC359_00615 PF15714 Stage V sporulation protein T C-terminal, transcription factor BC359_00620 PF03461 TRCF domain BC359_00620 PF00271 Helicase conserved C-terminal domain BC359_00620 PF00270 DEAD/DEAH box helicase BC359_00620 PF02559 CarD-like/TRCF domain BC359_00620 PF17757 UvrB interaction domain BC359_00625 PF10955 Protein of unknown function (DUF2757) BC359_00630 PF01195 Peptidyl-tRNA hydrolase BC359_00635 PF14693 Ribosomal protein TL5, C-terminal domain BC359_00635 PF01386 Ribosomal L25p family BC359_00640 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase BC359_00640 PF14572 Phosphoribosyl synthetase-associated domain BC359_00645 PF00483 Nucleotidyl transferase BC359_00645 PF00132 Bacterial transferase hexapeptide (six repeats) BC359_00650 PF04026 SpoVG BC359_00660 PF09182 Bacterial purine repressor, N-terminal BC359_00660 PF00156 Phosphoribosyl transferase domain BC359_00665 PF08544 GHMP kinases C terminal BC359_00665 PF00288 GHMP kinases N terminal domain BC359_00670 PF00269 Small, acid-soluble spore proteins, alpha/beta type BC359_00675 PF06257 Biofilm formation stimulator VEG BC359_00680 PF05582 YabG peptidase U57 BC359_00685 PF00398 Ribosomal RNA adenine dimethylase BC359_00690 PF13331 Domain of unknown function (DUF4093) BC359_00690 PF13662 Toprim domain BC359_00695 PF01026 TatD related DNase BC359_00700 PF01588 Putative tRNA binding domain BC359_00700 PF09334 tRNA synthetases class I (M) BC359_00700 PF08264 Anticodon-binding domain of tRNA BC359_00705 PF18277 AbrB C-terminal domain BC359_00705 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin BC359_00710 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BC359_00715 PF01541 GIY-YIG catalytic domain BC359_00720 PF05175 Methyltransferase small domain BC359_00725 PF06156 Initiation control protein YabA BC359_00730 PF04468 PSP1 C-terminal conserved region BC359_00735 PF09115 DNA polymerase III, delta subunit, C terminal BC359_00740 PF06153 Cyclic-di-AMP receptor BC359_00745 PF02223 Thymidylate kinase BC359_00750 PF01276 Orn/Lys/Arg decarboxylase, major domain BC359_00750 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain BC359_00855 PF02132 RecR protein BC359_00855 PF13662 Toprim domain BC359_00860 PF02575 YbaB/EbfC DNA-binding family BC359_00865 PF12169 DNA polymerase III subunits gamma and tau domain III BC359_00875 PF14437 MafB19-like deaminase BC359_00880 PF00857 Isochorismatase family BC359_00885 PF01476 LysM domain BC359_00885 PF00704 Glycosyl hydrolases family 18 BC359_00890 PF01712 Deoxynucleoside kinase BC359_00895 PF01712 Deoxynucleoside kinase BC359_00905 PF02403 Seryl-tRNA synthetase N-terminal domain BC359_00905 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BC359_00910 PF01174 SNO glutamine amidotransferase family BC359_00915 PF01680 SOR/SNZ family BC359_00920 PF07943 Penicillin-binding protein 5, C-terminal domain BC359_00920 PF00768 D-alanyl-D-alanine carboxypeptidase BC359_00925 PF00571 CBS domain BC359_00925 PF00478 IMP dehydrogenase / GMP reductase domain BC359_00930 PF14175 YaaC-like Protein BC359_00960 PF03989 DNA gyrase C-terminal domain, beta-propeller BC359_00960 PF00521 DNA gyrase/topoisomerase IV, subunit A BC359_00970 PF02463 RecF/RecN/SMC N terminal domain BC359_00980 PF00712 DNA polymerase III beta subunit, N-terminal domain BC359_00980 PF02767 DNA polymerase III beta subunit, central domain BC359_00980 PF02768 DNA polymerase III beta subunit, C-terminal domain BC359_00985 PF08299 Bacterial dnaA protein helix-turn-helix BC359_00985 PF00308 Bacterial dnaA protein BC359_00985 PF11638 DnaA N-terminal domain BC359_00990 PF00468 Ribosomal protein L34 BC359_00995 PF00825 Ribonuclease P BC359_01000 PF02096 60Kd inner membrane protein BC359_01005 PF14804 Jag N-terminus BC359_01005 PF01424 R3H domain BC359_01010 PF01926 50S ribosome-binding GTPase BC359_01010 PF10396 GTP-binding protein TrmE N-terminus BC359_01010 PF12631 MnmE helical domain BC359_01015 PF01134 Glucose inhibited division protein A BC359_01015 PF13932 GidA associated domain BC359_01020 PF02527 rRNA small subunit methyltransferase G BC359_01025 PF02195 ParB-like nuclease domain BC359_01025 PF17762 HTH domain found in ParB protein BC359_01030 PF13614 AAA domain BC359_01035 PF17762 HTH domain found in ParB protein BC359_01035 PF02195 ParB-like nuclease domain BC359_01040 PF06866 Protein of unknown function (DUF1256) BC359_01050 PF00924 Mechanosensitive ion channel BC359_01055 PF06107 Bacterial protein of unknown function (DUF951) BC359_01060 PF01926 50S ribosome-binding GTPase BC359_01060 PF06071 Protein of unknown function (DUF933) BC359_01065 PF01250 Ribosomal protein S6 BC359_01070 PF00436 Single-strand binding protein family BC359_01075 PF01084 Ribosomal protein S18 BC359_01085 PF01368 DHH family BC359_01085 PF02272 DHHA1 domain BC359_01090 PF01281 Ribosomal protein L9, N-terminal domain BC359_01090 PF03948 Ribosomal protein L9, C-terminal domain BC359_01095 PF03796 DnaB-like helicase C terminal domain BC359_01095 PF00772 DnaB-like helicase N terminal domain BC359_01100 PF00709 Adenylosuccinate synthetase BC359_01110 PF00665 Integrase core domain BC359_01110 PF13333 Integrase core domain BC359_01110 PF13276 HTH-like domain BC359_01145 PF00072 Response regulator receiver domain BC359_01145 PF00486 Transcriptional regulatory protein, C terminal BC359_01150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BC359_01150 PF00672 HAMP domain BC359_01150 PF13426 PAS domain BC359_01150 PF00512 His Kinase A (phospho-acceptor) domain BC359_01155 PF07435 YycH protein BC359_01160 PF09648 YycH protein BC359_01165 PF00753 Metallo-beta-lactamase superfamily BC359_01170 PF13180 PDZ domain BC359_01180 PF02590 Predicted SPOUT methyltransferase BC359_01185 PF07508 Recombinase BC359_01185 PF00239 Resolvase, N terminal domain BC359_01185 PF13408 Recombinase zinc beta ribbon domain BC359_01205 PF18010 Cry35Ab1 HTH C-terminal domain BC359_01205 PF00239 Resolvase, N terminal domain BC359_01210 PF12161 HsdM N-terminal domain BC359_01210 PF02384 N-6 DNA Methylase BC359_01215 PF01420 Type I restriction modification DNA specificity domain BC359_01355 PF13361 UvrD-like helicase C-terminal domain BC359_01355 PF00580 UvrD/REP helicase N-terminal domain BC359_01360 PF01609 Transposase DDE domain BC359_01370 PF00665 Integrase core domain BC359_01370 PF13276 HTH-like domain BC359_01370 PF13333 Integrase core domain BC359_01375 PF01527 Transposase BC359_01385 PF01555 DNA methylase BC359_01395 PF02384 N-6 DNA Methylase BC359_01395 PF12161 HsdM N-terminal domain BC359_01405 PF01420 Type I restriction modification DNA specificity domain BC359_01410 PF18766 SWI2/SNF2 ATPase BC359_01410 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) BC359_01410 PF11867 Domain of unknown function (DUF3387) BC359_01435 PF07728 AAA domain (dynein-related subfamily) BC359_01435 PF12102 Domain of unknown function (DUF3578) BC359_01460 PF01695 IstB-like ATP binding protein BC359_01475 PF00665 Integrase core domain BC359_01490 PF12832 MFS_1 like family BC359_01495 PF00027 Cyclic nucleotide-binding domain BC359_01500 PF00005 ABC transporter BC359_01500 PF09383 NIL domain BC359_01505 PF00528 Binding-protein-dependent transport system inner membrane component BC359_01510 PF03180 NLPA lipoprotein BC359_01515 PF07992 Pyridine nucleotide-disulphide oxidoreductase BC359_01515 PF13192 Thioredoxin domain BC359_01520 PF00578 AhpC/TSA family BC359_01525 PF06580 Histidine kinase BC359_01525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BC359_01525 PF00672 HAMP domain BC359_01525 PF02743 Cache domain BC359_01530 PF00072 Response regulator receiver domain BC359_01530 PF04397 LytTr DNA-binding domain BC359_01535 PF13416 Bacterial extracellular solute-binding protein BC359_01540 PF02435 Levansucrase/Invertase BC359_01545 PF08244 Glycosyl hydrolases family 32 C terminal BC359_01545 PF00251 Glycosyl hydrolases family 32 N-terminal domain BC359_01550 PF03880 DbpA RNA binding domain BC359_01550 PF00271 Helicase conserved C-terminal domain BC359_01550 PF00270 DEAD/DEAH box helicase BC359_01555 PF00128 Alpha amylase, catalytic domain BC359_01555 PF09154 Domain of unknown function (DUF1939) BC359_01560 PF00696 Amino acid kinase family BC359_01565 PF06738 Putative threonine/serine exporter BC359_01570 PF12821 Threonine/Serine exporter, ThrE BC359_01570 PF06738 Putative threonine/serine exporter BC359_01575 PF00884 Sulfatase BC359_01585 PF03023 Lipid II flippase MurJ BC359_01605 PF00535 Glycosyl transferase family 2 BC359_01610 PF00534 Glycosyl transferases group 1 BC359_01610 PF13439 Glycosyltransferase Family 4 BC359_01615 PF03372 Endonuclease/Exonuclease/phosphatase family BC359_01620 PF02378 Phosphotransferase system, EIIC BC359_01620 PF00367 phosphotransferase system, EIIB BC359_01620 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BC359_01625 PF13419 Haloacid dehalogenase-like hydrolase BC359_01635 PF08543 Phosphomethylpyrimidine kinase BC359_01640 PF05222 Alanine dehydrogenase/PNT, N-terminal domain BC359_01640 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BC359_01645 PF06018 CodY GAF-like domain BC359_01645 PF17853 GGDEF-like domain BC359_01645 PF13556 PucR C-terminal helix-turn-helix domain BC359_01650 PF01235 Sodium:alanine symporter family BC359_01655 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BC359_01655 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain BC359_01660 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain BC359_01660 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain BC359_01670 PF03167 Uracil DNA glycosylase superfamily BC359_01680 PF04241 Protein of unknown function (DUF423) BC359_01685 PF09671 Spore coat protein (Spore_GerQ) BC359_01690 PF07486 Cell Wall Hydrolase BC359_01700 PF01515 Phosphate acetyl/butaryl transferase BC359_01705 PF03099 Biotin/lipoate A/B protein ligase family BC359_01715 PF07293 Protein of unknown function (DUF1450) BC359_01720 PF01966 HD domain BC359_01730 PF01361 Tautomerase enzyme BC359_01735 PF02163 Peptidase family M50 BC359_01740 PF08741 YwhD family BC359_01745 PF00905 Penicillin binding protein transpeptidase domain BC359_01745 PF00912 Transglycosylase BC359_01750 PF17284 Spermidine synthase tetramerisation domain BC359_01755 PF00491 Arginase family BC359_01765 PF00750 tRNA synthetases class I (R) BC359_01765 PF03485 Arginyl tRNA synthetase N terminal domain BC359_01765 PF05746 DALR anticodon binding domain BC359_01770 PF03851 UV-endonuclease UvdE BC359_01775 PF13091 PLD-like domain BC359_01780 PF02754 Cysteine-rich domain BC359_01780 PF13183 4Fe-4S dicluster domain BC359_01790 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BC359_01790 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BC359_01795 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BC359_01795 PF02770 Acyl-CoA dehydrogenase, middle domain BC359_01795 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BC359_01800 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BC359_01800 PF02770 Acyl-CoA dehydrogenase, middle domain BC359_01800 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BC359_01810 PF02310 B12 binding domain BC359_01810 PF01642 Methylmalonyl-CoA mutase BC359_01815 PF05066 HB1, ASXL, restriction endonuclease HTH domain BC359_01820 PF00117 Glutamine amidotransferase class-I BC359_01820 PF06418 CTP synthase N-terminus BC359_01825 PF10740 Domain of unknown function (DUF2529) BC359_01830 PF00072 Response regulator receiver domain BC359_01835 PF01116 Fructose-bisphosphate aldolase class-II BC359_01840 PF00923 Transaldolase/Fructose-6-phosphate aldolase BC359_01845 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BC359_01850 PF07497 Rho termination factor, RNA-binding domain BC359_01850 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BC359_01850 PF07498 Rho termination factor, N-terminal domain BC359_01855 PF01197 Ribosomal protein L31 BC359_01860 PF00265 Thymidine kinase BC359_01870 PF03462 PCRF domain BC359_01870 PF00472 RF-1 domain BC359_01875 PF17827 PrmC N-terminal domain BC359_01875 PF13847 Methyltransferase domain BC359_01880 PF09551 Stage II sporulation protein R (spore_II_R) BC359_01895 PF02659 Putative manganese efflux pump BC359_01900 PF01451 Low molecular weight phosphotyrosine protein phosphatase BC359_01905 PF02502 Ribose/Galactose Isomerase BC359_01910 PF04260 Protein of unknown function (DUF436) BC359_01915 PF00464 Serine hydroxymethyltransferase BC359_01925 PF02350 UDP-N-acetylglucosamine 2-epimerase BC359_01940 PF03899 ATP synthase I chain BC359_01945 PF00119 ATP synthase A chain BC359_01950 PF00137 ATP synthase subunit C BC359_01955 PF00430 ATP synthase B/B' CF(0) BC359_01960 PF00213 ATP synthase delta (OSCP) subunit BC359_01965 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BC359_01965 PF02874 ATP synthase alpha/beta family, beta-barrel domain BC359_01965 PF00306 ATP synthase alpha/beta chain, C terminal domain BC359_01970 PF00231 ATP synthase BC359_01975 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BC359_01975 PF02874 ATP synthase alpha/beta family, beta-barrel domain BC359_01980 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain BC359_01980 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain BC359_01985 PF06612 Protein of unknown function (DUF1146) BC359_01995 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BC359_02010 PF08486 Stage II sporulation protein BC359_02015 PF01551 Peptidase family M23 BC359_02020 PF12116 Stage III sporulation protein D BC359_02030 PF00460 Flagella basal body rod protein BC359_02030 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BC359_02035 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BC359_02035 PF00460 Flagella basal body rod protein BC359_02040 PF01609 Transposase DDE domain BC359_02055 PF14183 YwpF-like protein BC359_02060 PF00436 Single-strand binding protein family BC359_02065 PF01476 LysM domain BC359_02065 PF00877 NlpC/P60 family BC359_02070 PF00271 Helicase conserved C-terminal domain BC359_02070 PF12419 SNF2 Helicase protein BC359_02070 PF00176 SNF2 family N-terminal domain BC359_02080 PF00483 Nucleotidyl transferase BC359_02085 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BC359_02085 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BC359_02085 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BC359_02090 PF03808 Glycosyl transferase WecB/TagA/CpsF family BC359_02095 PF15975 Flotillin BC359_02095 PF01145 SPFH domain / Band 7 family BC359_02105 PF00953 Glycosyl transferase family 4 BC359_02110 PF03816 Cell envelope-related transcriptional attenuator domain BC359_02115 PF09186 Domain of unknown function (DUF1949) BC359_02115 PF01205 Uncharacterized protein family UPF0029 BC359_02120 PF07730 Histidine kinase BC359_02120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BC359_02120 PF05384 Sensor protein DegS BC359_02125 PF00072 Response regulator receiver domain BC359_02125 PF00196 Bacterial regulatory proteins, luxR family BC359_02145 PF00669 Bacterial flagellin N-terminal helical region BC359_02145 PF00700 Bacterial flagellin C-terminal helical region BC359_02150 PF03885 Protein of unknown function (DUF327) BC359_02155 PF02645 Uncharacterised protein, DegV family COG1307 BC359_02160 PF00271 Helicase conserved C-terminal domain BC359_02160 PF04851 Type III restriction enzyme, res subunit BC359_02175 PF04316 Anti-sigma-28 factor, FlgM BC359_02185 PF00460 Flagella basal body rod protein BC359_02185 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BC359_02190 PF00669 Bacterial flagellin N-terminal helical region BC359_02190 PF00700 Bacterial flagellin C-terminal helical region BC359_02200 PF02623 FliW protein BC359_02205 PF02599 Global regulator protein family BC359_02210 PF00669 Bacterial flagellin N-terminal helical region BC359_02210 PF00700 Bacterial flagellin C-terminal helical region BC359_02215 PF00700 Bacterial flagellin C-terminal helical region BC359_02215 PF00669 Bacterial flagellin N-terminal helical region BC359_02240 PF02465 Flagellar hook-associated protein 2 N-terminus BC359_02240 PF07195 Flagellar hook-associated protein 2 C-terminus BC359_02245 PF02561 Flagellar protein FliS BC359_02255 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus BC359_02255 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein BC359_02260 PF02810 SEC-C motif BC359_02260 PF07517 SecA DEAD-like domain BC359_02260 PF01043 SecA preprotein cross-linking domain BC359_02260 PF07516 SecA Wing and Scaffold domain BC359_02265 PF03462 PCRF domain BC359_02265 PF00472 RF-1 domain BC359_02275 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BC359_02280 PF00005 ABC transporter BC359_02285 PF18075 FtsX extracellular domain BC359_02285 PF02687 FtsX-like permease family BC359_02290 PF00877 NlpC/P60 family BC359_02295 PF01471 Putative peptidoglycan binding domain BC359_02295 PF17820 PDZ domain BC359_02295 PF03572 Peptidase family S41 BC359_02300 PF01638 HxlR-like helix-turn-helix BC359_02305 PF02525 Flavodoxin-like fold BC359_02310 PF02525 Flavodoxin-like fold BC359_02315 PF17820 PDZ domain BC359_02320 PF01619 Proline dehydrogenase BC359_02325 PF00171 Aldehyde dehydrogenase family BC359_02330 PF00474 Sodium:solute symporter family BC359_02335 PF00158 Sigma-54 interaction domain BC359_02335 PF02954 Bacterial regulatory protein, Fis family BC359_02335 PF13426 PAS domain BC359_02340 PF00271 Helicase conserved C-terminal domain BC359_02340 PF12344 Ultra-violet resistance protein B BC359_02340 PF04851 Type III restriction enzyme, res subunit BC359_02340 PF17757 UvrB interaction domain BC359_02340 PF02151 UvrB/uvrC motif BC359_02345 PF17755 UvrA DNA-binding domain BC359_02345 PF00005 ABC transporter BC359_02345 PF17760 UvrA interaction domain BC359_02350 PF13349 Putative adhesin BC359_02355 PF04024 PspC domain BC359_02360 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV BC359_02365 PF02603 HPr Serine kinase N terminus BC359_02365 PF07475 HPr Serine kinase C-terminal domain BC359_02370 PF01790 Prolipoprotein diacylglyceryl transferase BC359_02375 PF07670 Nucleoside recognition BC359_02380 PF13419 Haloacid dehalogenase-like hydrolase BC359_02385 PF14602 Hexapeptide repeat of succinyl-transferase BC359_02390 PF13393 Histidyl-tRNA synthetase BC359_02395 PF01634 ATP phosphoribosyltransferase BC359_02400 PF00815 Histidinol dehydrogenase BC359_02405 PF00475 Imidazoleglycerol-phosphate dehydratase BC359_02410 PF00117 Glutamine amidotransferase class-I BC359_02415 PF00977 Histidine biosynthesis protein BC359_02420 PF00977 Histidine biosynthesis protein BC359_02425 PF01502 Phosphoribosyl-AMP cyclohydrolase BC359_02425 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase BC359_02435 PF07992 Pyridine nucleotide-disulphide oxidoreductase BC359_02440 PF00293 NUDIX domain BC359_02445 PF03668 P-loop ATPase protein family BC359_02450 PF01933 Uncharacterised protein family UPF0052 BC359_02455 PF02650 WhiA C-terminal HTH domain BC359_02455 PF14527 WhiA LAGLIDADG-like domain BC359_02455 PF10298 WhiA N-terminal LAGLIDADG-like domain BC359_02460 PF00381 PTS HPr component phosphorylation site BC359_02465 PF00574 Clp protease BC359_02480 PF00309 Sigma-54 factor, Activator interacting domain (AID) BC359_02480 PF04552 Sigma-54, DNA binding domain BC359_02480 PF04963 Sigma-54 factor, core binding domain BC359_02490 PF04198 Putative sugar-binding domain BC359_02495 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BC359_02495 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BC359_02500 PF00162 Phosphoglycerate kinase BC359_02505 PF00121 Triosephosphate isomerase BC359_02510 PF06415 BPG-independent PGAM N-terminus (iPGM_N) BC359_02510 PF01676 Metalloenzyme superfamily BC359_02515 PF00113 Enolase, C-terminal TIM barrel domain BC359_02515 PF03952 Enolase, N-terminal domain BC359_02520 PF03840 Preprotein translocase SecG subunit BC359_02525 PF12146 Serine aminopeptidase, S33 BC359_02530 PF00575 S1 RNA binding domain BC359_02530 PF00773 RNB domain BC359_02530 PF17876 Cold shock domain BC359_02530 PF08206 Ribonuclease B OB domain BC359_02535 PF01668 SmpB protein BC359_02550 PF01709 Transcriptional regulator BC359_02555 PF07690 Major Facilitator Superfamily BC359_02560 PF13217 Protein of unknown function (DUF4025) BC359_02565 PF01497 Periplasmic binding protein BC359_02570 PF01032 FecCD transport family BC359_02575 PF01032 FecCD transport family BC359_02580 PF00005 ABC transporter BC359_02590 PF10835 Protein of unknown function (DUF2573) BC359_02595 PF01619 Proline dehydrogenase BC359_02600 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BC359_02600 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BC359_02600 PF00378 Enoyl-CoA hydratase/isomerase BC359_02605 PF02803 Thiolase, C-terminal domain BC359_02605 PF00108 Thiolase, N-terminal domain BC359_02610 PF02770 Acyl-CoA dehydrogenase, middle domain BC359_02610 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BC359_02610 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BC359_02615 PF03960 ArsC family BC359_02620 PF01597 Glycine cleavage H-protein BC359_02630 PF01751 Toprim domain BC359_02640 PF09383 NIL domain BC359_02640 PF00005 ABC transporter BC359_02645 PF00528 Binding-protein-dependent transport system inner membrane component BC359_02650 PF03180 NLPA lipoprotein BC359_02655 PF02627 Carboxymuconolactone decarboxylase family BC359_02660 PF00005 ABC transporter BC359_02665 PF01458 Uncharacterized protein family (UPF0051) BC359_02670 PF00266 Aminotransferase class-V BC359_02675 PF01592 NifU-like N terminal domain BC359_02680 PF01458 Uncharacterized protein family (UPF0051) BC359_02685 PF01904 Protein of unknown function DUF72 BC359_02690 PF08827 Domain of unknown function (DUF1805) BC359_02695 PF11871 Domain of unknown function (DUF3391) BC359_02695 PF01966 HD domain BC359_02700 PF09560 Sporulation protein YunB (Spo_YunB) BC359_02705 PF03553 Na+/H+ antiporter family BC359_02710 PF00209 Sodium:neurotransmitter symporter family BC359_02720 PF01551 Peptidase family M23 BC359_02725 PF04055 Radical SAM superfamily BC359_02725 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family BC359_02730 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) BC359_02735 PF06265 Protein of unknown function (DUF1027) BC359_02745 PF01934 Protein of unknown function DUF86 BC359_02750 PF13344 Haloacid dehalogenase-like hydrolase BC359_02755 PF04608 Phosphatidylglycerophosphatase A BC359_02765 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BC359_02765 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BC359_02770 PF01842 ACT domain BC359_02770 PF03447 Homoserine dehydrogenase, NAD binding domain BC359_02770 PF00742 Homoserine dehydrogenase BC359_02775 PF00291 Pyridoxal-phosphate dependent enzyme BC359_02780 PF00288 GHMP kinases N terminal domain BC359_02780 PF08544 GHMP kinases C terminal BC359_02785 PF01106 NifU-like domain BC359_02790 PF07315 Protein of unknown function (DUF1462) BC359_02795 PF07992 Pyridine nucleotide-disulphide oxidoreductase BC359_02800 PF07293 Protein of unknown function (DUF1450) BC359_02810 PF01678 Diaminopimelate epimerase BC359_02815 PF01521 Iron-sulphur cluster biosynthesis BC359_02820 PF02899 Phage integrase, N-terminal SAM-like domain BC359_02820 PF00589 Phage integrase family BC359_02910 PF07992 Pyridine nucleotide-disulphide oxidoreductase BC359_02915 PF07992 Pyridine nucleotide-disulphide oxidoreductase BC359_02920 PF14068 Putative membrane protein BC359_02925 PF06725 3D domain BC359_02930 PF00883 Cytosol aminopeptidase family, catalytic domain BC359_02930 PF02789 Cytosol aminopeptidase family, N-terminal domain BC359_02935 PF03553 Na+/H+ antiporter family BC359_02935 PF13726 Na+-H+ antiporter family BC359_02950 PF03061 Thioesterase superfamily BC359_02955 PF00929 Exonuclease BC359_02960 PF08810 Kinase associated protein B BC359_02970 PF00080 Copper/zinc superoxide dismutase (SODC) BC359_02975 PF00155 Aminotransferase class I and II BC359_02980 PF08386 TAP-like protein BC359_02980 PF00561 alpha/beta hydrolase fold BC359_02985 PF01037 Lrp/AsnC ligand binding domain BC359_02990 PF00155 Aminotransferase class I and II BC359_02995 PF00575 S1 RNA binding domain BC359_03000 PF04070 Domain of unknown function (DUF378) BC359_03005 PF00465 Iron-containing alcohol dehydrogenase BC359_03015 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) BC359_03020 PF01899 Na+/H+ ion antiporter subunit BC359_03025 PF00361 Proton-conducting membrane transporter BC359_03030 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L BC359_03035 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter BC359_03040 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus BC359_03040 PF13244 Domain of unknown function (DUF4040) BC359_03040 PF00361 Proton-conducting membrane transporter BC359_03050 PF00342 Phosphoglucose isomerase BC359_03055 PF08868 YugN-like family BC359_03060 PF07885 Ion channel BC359_03060 PF02254 TrkA-N domain BC359_03065 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BC359_03075 PF10372 Bacterial membrane-spanning protein N-terminus BC359_03075 PF02457 DisA bacterial checkpoint controller nucleotide-binding BC359_03085 PF01507 Phosphoadenosine phosphosulfate reductase family BC359_03090 PF01384 Phosphate transporter family BC359_03095 PF01747 ATP-sulfurylase BC359_03095 PF14306 PUA-like domain BC359_03105 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BC359_03110 PF01903 CbiX BC359_03115 PF14824 Sirohaem biosynthesis protein central BC359_03120 PF02308 MgtC family BC359_03125 PF13193 AMP-binding enzyme C-terminal domain BC359_03125 PF00501 AMP-binding enzyme BC359_03250 PF02806 Alpha amylase, C-terminal all-beta domain BC359_03250 PF00128 Alpha amylase, catalytic domain BC359_03250 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BC359_03260 PF00483 Nucleotidyl transferase BC359_03265 PF08323 Starch synthase catalytic domain BC359_03265 PF00534 Glycosyl transferases group 1 BC359_03270 PF00343 Carbohydrate phosphorylase BC359_03275 PF01258 Prokaryotic dksA/traR C4-type zinc finger BC359_03280 PF00425 chorismate binding enzyme BC359_03285 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BC359_03285 PF16582 Middle domain of thiamine pyrophosphate BC359_03285 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BC359_03290 PF00561 alpha/beta hydrolase fold BC359_03295 PF00378 Enoyl-CoA hydratase/isomerase BC359_03300 PF00501 AMP-binding enzyme BC359_03300 PF13193 AMP-binding enzyme C-terminal domain BC359_03305 PF13378 Enolase C-terminal domain-like BC359_03305 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BC359_03310 PF02867 Ribonucleotide reductase, barrel domain BC359_03310 PF00317 Ribonucleotide reductase, all-alpha domain BC359_03310 PF03477 ATP cone domain BC359_03315 PF00268 Ribonucleotide reductase, small chain BC359_03325 PF07561 Domain of Unknown Function (DUF1540) BC359_03340 PF02322 Cytochrome bd terminal oxidase subunit II BC359_03345 PF01654 Cytochrome bd terminal oxidase subunit I BC359_03350 PF01197 Ribosomal protein L31 BC359_03355 PF01297 Zinc-uptake complex component A periplasmic BC359_03360 PF07683 Cobalamin synthesis protein cobW C-terminal domain BC359_03360 PF02492 CobW/HypB/UreG, nucleotide-binding domain BC359_03365 PF00484 Carbonic anhydrase BC359_03370 PF01809 Putative membrane protein insertion efficiency factor BC359_03375 PF02664 S-Ribosylhomocysteinase (LuxS) BC359_03385 PF00210 Ferritin-like domain BC359_03390 PF05105 Bacteriophage holin family BC359_03400 PF00293 NUDIX domain BC359_03405 PF00528 Binding-protein-dependent transport system inner membrane component BC359_03410 PF00005 ABC transporter BC359_03420 PF00326 Prolyl oligopeptidase family BC359_03425 PF10763 Protein of unknown function (DUF2584) BC359_03430 PF01293 Phosphoenolpyruvate carboxykinase BC359_03435 PF00438 S-adenosylmethionine synthetase, N-terminal domain BC359_03435 PF02772 S-adenosylmethionine synthetase, central domain BC359_03435 PF02773 S-adenosylmethionine synthetase, C-terminal domain BC359_03440 PF13439 Glycosyltransferase Family 4 BC359_03440 PF00534 Glycosyl transferases group 1 BC359_03445 PF01569 PAP2 superfamily BC359_03450 PF00132 Bacterial transferase hexapeptide (six repeats) BC359_03455 PF12146 Serine aminopeptidase, S33 BC359_03460 PF10776 Protein of unknown function (DUF2600) BC359_03465 PF06962 Putative rRNA methylase BC359_03470 PF16199 Radical_SAM C-terminal domain BC359_03470 PF04055 Radical SAM superfamily BC359_03475 PF10732 Protein of unknown function (DUF2524) BC359_03485 PF07690 Major Facilitator Superfamily BC359_03495 PF08264 Anticodon-binding domain of tRNA BC359_03495 PF09334 tRNA synthetases class I (M) BC359_03495 PF00133 tRNA synthetases class I (I, L, M and V) BC359_03495 PF13603 Leucyl-tRNA synthetase, Domain 2 BC359_03500 PF00581 Rhodanese-like domain BC359_03505 PF10957 Sporulation protein Cse60 BC359_03515 PF01943 Polysaccharide biosynthesis protein BC359_03515 PF14667 Polysaccharide biosynthesis C-terminal domain BC359_03520 PF00849 RNA pseudouridylate synthase BC359_03520 PF01479 S4 domain BC359_03525 PF08220 DeoR-like helix-turn-helix domain BC359_03530 PF01546 Peptidase family M20/M25/M40 BC359_03535 PF00291 Pyridoxal-phosphate dependent enzyme BC359_03545 PF17999 Pullulanase N1-terminal domain BC359_03545 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) BC359_03545 PF00128 Alpha amylase, catalytic domain BC359_03550 PF01636 Phosphotransferase enzyme family BC359_03555 PF14165 YtzH-like protein BC359_03560 PF02390 Putative methyltransferase BC359_03565 PF00753 Metallo-beta-lactamase superfamily BC359_03575 PF05343 M42 glutamyl aminopeptidase BC359_03580 PF01931 Protein of unknown function DUF84 BC359_03585 PF00085 Thioredoxin BC359_03590 PF07285 Protein of unknown function (DUF1444) BC359_03595 PF01588 Putative tRNA binding domain BC359_03595 PF14794 Domain of unknown function (DUF4479) BC359_03600 PF01580 FtsK/SpoIIIE family BC359_03600 PF17854 FtsK alpha domain BC359_03600 PF09397 Ftsk gamma domain BC359_03610 PF08245 Mur ligase middle domain BC359_03610 PF01225 Mur ligase family, catalytic domain BC359_03610 PF02875 Mur ligase family, glutamate ligase domain BC359_03625 PF12732 YtxH-like protein BC359_03630 PF11009 Protein of unknown function (DUF2847) BC359_03635 PF01817 Chorismate mutase type II BC359_03635 PF00793 DAHP synthetase I family BC359_03640 PF00356 Bacterial regulatory proteins, lacI family BC359_03650 PF13677 Membrane MotB of proton-channel complex MotA/MotB BC359_03650 PF00691 OmpA family BC359_03655 PF00850 Histone deacetylase domain BC359_03660 PF00571 CBS domain BC359_03665 PF00583 Acetyltransferase (GNAT) family BC359_03670 PF13193 AMP-binding enzyme C-terminal domain BC359_03670 PF00501 AMP-binding enzyme BC359_03675 PF01479 S4 domain BC359_03675 PF00579 tRNA synthetases class I (W and Y) BC359_03680 PF00163 Ribosomal protein S4/S9 N-terminal domain BC359_03680 PF01479 S4 domain BC359_03685 PF00990 Diguanylate cyclase, GGDEF domain BC359_03690 PF13185 GAF domain BC359_03695 PF00440 Bacterial regulatory proteins, tetR family BC359_03700 PF02811 PHP domain BC359_03705 PF06160 Septation ring formation regulator, EzrA BC359_03710 PF05525 Branched-chain amino acid transport protein BC359_03715 PF00266 Aminotransferase class-V BC359_03720 PF02926 THUMP domain BC359_03720 PF02568 Thiamine biosynthesis protein (ThiI) BC359_03725 PF00269 Small, acid-soluble spore proteins, alpha/beta type BC359_03730 PF07969 Amidohydrolase family BC359_03735 PF01513 ATP-NAD kinase BC359_03740 PF01343 Peptidase family S49 BC359_03745 PF06271 RDD family BC359_03755 PF09579 Sporulation protein YtfJ (Spore_YtfJ) BC359_03760 PF08534 Redoxin BC359_03765 PF02384 N-6 DNA Methylase BC359_03770 PF00871 Acetokinase family BC359_03785 PF00764 Arginosuccinate synthase BC359_03790 PF14698 Argininosuccinate lyase C-terminal BC359_03790 PF00206 Lyase BC359_03795 PF05222 Alanine dehydrogenase/PNT, N-terminal domain BC359_03795 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BC359_03810 PF07085 DRTGG domain BC359_03810 PF03061 Thioesterase superfamily BC359_03810 PF00571 CBS domain BC359_03810 PF00392 Bacterial regulatory proteins, gntR family BC359_03825 PF01368 DHH family BC359_03825 PF02272 DHHA1 domain BC359_03835 PF14034 Sporulation protein YtrH BC359_03840 PF07733 Bacterial DNA polymerase III alpha NTPase domain BC359_03840 PF17657 Bacterial DNA polymerase III alpha subunit finger domain BC359_03840 PF14579 Helix-hairpin-helix motif BC359_03840 PF02811 PHP domain BC359_03840 PF01336 OB-fold nucleic acid binding domain BC359_03850 PF00392 Bacterial regulatory proteins, gntR family BC359_03855 PF17848 Acetyl-coA carboxylase zinc finger domain BC359_03855 PF01039 Carboxyl transferase domain BC359_03860 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit BC359_03865 PF00224 Pyruvate kinase, barrel domain BC359_03865 PF02887 Pyruvate kinase, alpha/beta domain BC359_03865 PF00391 PEP-utilising enzyme, mobile domain BC359_03870 PF04186 FxsA cytoplasmic membrane protein BC359_03875 PF01594 AI-2E family transporter BC359_03880 PF04284 Protein of unknown function (DUF441) BC359_03885 PF00285 Citrate synthase, C-terminal domain BC359_03890 PF00180 Isocitrate/isopropylmalate dehydrogenase BC359_03895 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BC359_03895 PF00056 lactate/malate dehydrogenase, NAD binding domain BC359_03905 PF00486 Transcriptional regulatory protein, C terminal BC359_03905 PF00072 Response regulator receiver domain BC359_03910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BC359_03910 PF16736 Single Cache-like BC359_03910 PF00989 PAS fold BC359_03910 PF00512 His Kinase A (phospho-acceptor) domain BC359_03915 PF00476 DNA polymerase family A BC359_03915 PF01367 5'-3' exonuclease, C-terminal SAM fold BC359_03915 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BC359_03920 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain BC359_03920 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain BC359_03920 PF06827 Zinc finger found in FPG and IleRS BC359_03925 PF02659 Putative manganese efflux pump BC359_03930 PF01121 Dephospho-CoA kinase BC359_03935 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain BC359_03935 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain BC359_03940 PF02675 S-adenosylmethionine decarboxylase BC359_03950 PF03477 ATP cone domain BC359_03955 PF07261 Replication initiation and membrane attachment BC359_03960 PF01695 IstB-like ATP binding protein BC359_03960 PF07319 Primosomal protein DnaI N-terminus BC359_03965 PF08812 YtxC-like family BC359_03970 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BC359_03970 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BC359_03970 PF03129 Anticodon binding domain BC359_03970 PF02824 TGS domain BC359_03975 PF05198 Translation initiation factor IF-3, N-terminal domain BC359_03975 PF00707 Translation initiation factor IF-3, C-terminal domain BC359_03980 PF01632 Ribosomal protein L35 BC359_03985 PF00453 Ribosomal protein L20 BC359_03990 PF06961 Protein of unknown function (DUF1294) BC359_04010 PF05343 M42 glutamyl aminopeptidase BC359_04015 PF14098 Small, acid-soluble spore protein I BC359_04020 PF08032 RNA 2'-O ribose methyltransferase substrate binding BC359_04020 PF00588 SpoU rRNA Methylase family BC359_04025 PF01409 tRNA synthetases class II core domain (F) BC359_04025 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain BC359_04040 PF05164 Cell division protein ZapA BC359_04045 PF02674 Colicin V production protein BC359_04050 PF14791 DNA polymerase beta thumb BC359_04050 PF02811 PHP domain BC359_04050 PF14716 Helix-hairpin-helix domain BC359_04055 PF00488 MutS domain V BC359_04055 PF01713 Smr domain BC359_04060 PF03994 Domain of Unknown Function (DUF350) BC359_04065 PF13193 AMP-binding enzyme C-terminal domain BC359_04065 PF00501 AMP-binding enzyme BC359_04070 PF08359 YsiA-like protein, C-terminal region BC359_04070 PF00440 Bacterial regulatory proteins, tetR family BC359_04075 PF00378 Enoyl-CoA hydratase/isomerase BC359_04080 PF01012 Electron transfer flavoprotein domain BC359_04085 PF00766 Electron transfer flavoprotein FAD-binding domain BC359_04085 PF01012 Electron transfer flavoprotein domain BC359_04090 PF00085 Thioredoxin BC359_04095 PF08459 UvrC Helix-hairpin-helix N-terminal BC359_04095 PF02151 UvrB/uvrC motif BC359_04095 PF01541 GIY-YIG catalytic domain BC359_04100 PF00696 Amino acid kinase family BC359_04100 PF01842 ACT domain BC359_04100 PF13840 ACT domain BC359_04105 PF10702 Protein of unknown function (DUF2507) BC359_04110 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit BC359_04115 PF00890 FAD binding domain BC359_04115 PF02910 Fumarate reductase flavoprotein C-term BC359_04125 PF00196 Bacterial regulatory proteins, luxR family BC359_04135 PF02080 TrkA-C domain BC359_04140 PF00999 Sodium/hydrogen exchanger family BC359_04155 PF01865 Protein of unknown function DUF47 BC359_04160 PF01384 Phosphate transporter family BC359_04165 PF01047 MarR family BC359_04170 PF01177 Asp/Glu/Hydantoin racemase BC359_04175 PF10646 Sporulation and spore germination BC359_04185 PF01725 Ham1 family BC359_04190 PF12850 Calcineurin-like phosphoesterase superfamily domain BC359_04200 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BC359_04200 PF00205 Thiamine pyrophosphate enzyme, central domain BC359_04200 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BC359_04205 PF10369 Small subunit of acetolactate synthase BC359_04205 PF01842 ACT domain BC359_04210 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain BC359_04210 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain BC359_04215 PF00682 HMGL-like BC359_04215 PF08502 LeuA allosteric (dimerisation) domain BC359_04220 PF00180 Isocitrate/isopropylmalate dehydrogenase BC359_04225 PF00330 Aconitase family (aconitate hydratase) BC359_04230 PF00694 Aconitase C-terminal domain BC359_04240 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase BC359_04240 PF05698 Bacterial trigger factor protein (TF) C-terminus BC359_04240 PF05697 Bacterial trigger factor protein (TF) BC359_04245 PF10431 C-terminal, D2-small domain, of ClpB protein BC359_04245 PF06689 ClpX C4-type zinc finger BC359_04245 PF07724 AAA domain (Cdc48 subfamily) BC359_04250 PF00004 ATPase family associated with various cellular activities (AAA) BC359_04250 PF05362 Lon protease (S16) C-terminal proteolytic domain BC359_04255 PF05362 Lon protease (S16) C-terminal proteolytic domain BC359_04255 PF00004 ATPase family associated with various cellular activities (AAA) BC359_04255 PF02190 ATP-dependent protease La (LON) substrate-binding domain BC359_04260 PF01926 50S ribosome-binding GTPase BC359_04270 PF01488 Shikimate / quinate 5-dehydrogenase BC359_04270 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain BC359_04270 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain BC359_04275 PF01578 Cytochrome C assembly protein BC359_04280 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain BC359_04280 PF03900 Porphobilinogen deaminase, C-terminal domain BC359_04290 PF00490 Delta-aminolevulinic acid dehydratase BC359_04300 PF01476 LysM domain BC359_04315 PF10458 Valyl tRNA synthetase tRNA binding arm BC359_04315 PF08264 Anticodon-binding domain of tRNA BC359_04315 PF00133 tRNA synthetases class I (I, L, M and V) BC359_04325 PF08245 Mur ligase middle domain BC359_04325 PF02875 Mur ligase family, glutamate ligase domain BC359_04335 PF04238 Protein of unknown function (DUF420) BC359_04345 PF00482 Type II secretion system (T2SS), protein F BC359_04350 PF07963 Prokaryotic N-terminal methylation motif BC359_04350 PF00114 Pilin (bacterial filament) BC359_04355 PF06750 Bacterial Peptidase A24 N-terminal domain BC359_04355 PF01478 Type IV leader peptidase family BC359_04385 PF02545 Maf-like protein BC359_04390 PF04002 RadC-like JAB domain BC359_04400 PF04085 rod shape-determining protein MreC BC359_04405 PF04093 rod shape-determining protein MreD BC359_04415 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain BC359_04420 PF01551 Peptidase family M23 BC359_04425 PF02163 Peptidase family M50 BC359_04430 PF10150 Ribonuclease E/G family BC359_04430 PF00575 S1 RNA binding domain BC359_04435 PF00829 Ribosomal prokaryotic L21 protein BC359_04440 PF04327 Cysteine protease Prp BC359_04445 PF01016 Ribosomal L27 protein BC359_04450 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain BC359_04450 PF14682 Sporulation initiation phospho-transferase B, C-terminal BC359_04455 PF09269 Domain of unknown function (DUF1967) BC359_04455 PF01926 50S ribosome-binding GTPase BC359_04455 PF01018 GTP1/OBG BC359_04460 PF01842 ACT domain BC359_04465 PF01842 ACT domain BC359_04465 PF00800 Prephenate dehydratase BC359_04470 PF08279 HTH domain BC359_04470 PF02829 3H domain BC359_04475 PF00266 Aminotransferase class-V BC359_04485 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain BC359_04485 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain BC359_04490 PF02445 Quinolinate synthetase A protein BC359_04495 PF01476 LysM domain BC359_04510 PF08977 Bypass of Forespore C, N terminal BC359_04510 PF08955 BofC C-terminal domain BC359_04520 PF05491 RuvB C-terminal winged helix domain BC359_04520 PF17864 RuvB AAA lid domain BC359_04520 PF05496 Holliday junction DNA helicase RuvB P-loop domain BC359_04525 PF11146 Protein of unknown function (DUF2905) BC359_04530 PF02547 Queuosine biosynthesis protein BC359_04540 PF02699 Preprotein translocase subunit BC359_04545 PF12670 Protein of unknown function (DUF3792) BC359_04550 PF04239 Protein of unknown function (DUF421) BC359_04555 PF14667 Polysaccharide biosynthesis C-terminal domain BC359_04555 PF01943 Polysaccharide biosynthesis protein BC359_04560 PF13797 Post-transcriptional regulator BC359_04565 PF07549 SecD/SecF GG Motif BC359_04565 PF02355 Protein export membrane protein BC359_04570 PF01545 Cation efflux family BC359_04570 PF16916 Dimerisation domain of Zinc Transporter BC359_04580 PF00156 Phosphoribosyl transferase domain BC359_04585 PF02824 TGS domain BC359_04585 PF04607 Region found in RelA / SpoT proteins BC359_04585 PF13291 ACT domain BC359_04590 PF02580 D-Tyr-tRNA(Tyr) deacylase BC359_04595 PF08239 Bacterial SH3 domain BC359_04595 PF01520 N-acetylmuramoyl-L-alanine amidase BC359_04605 PF03129 Anticodon binding domain BC359_04605 PF13393 Histidyl-tRNA synthetase BC359_04610 PF02938 GAD domain BC359_04610 PF00152 tRNA synthetases class II (D, K and N) BC359_04610 PF01336 OB-fold nucleic acid binding domain BC359_04620 PF00899 ThiF family BC359_04625 PF16193 AAA C-terminal domain BC359_04625 PF12002 MgsA AAA+ ATPase C terminal BC359_04625 PF05496 Holliday junction DNA helicase RuvB P-loop domain BC359_04630 PF02082 Transcriptional regulator BC359_04635 PF00266 Aminotransferase class-V BC359_04650 PF13538 UvrD-like helicase C-terminal domain BC359_04650 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain BC359_04650 PF14490 Helix-hairpin-helix containing domain BC359_04660 PF01594 AI-2E family transporter BC359_04665 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BC359_04665 PF01411 tRNA synthetases class II (A) BC359_04665 PF02272 DHHA1 domain BC359_04670 PF06135 IreB regulatory phosphoprotein BC359_04675 PF03652 Holliday junction resolvase BC359_04680 PF06949 Protein of unknown function (DUF1292) BC359_04685 PF02618 YceG-like family BC359_04705 PF00485 Phosphoribulokinase / Uridine kinase family BC359_04710 PF01272 Transcription elongation factor, GreA/GreB, C-term BC359_04710 PF03449 Transcription elongation factor, N-terminal BC359_04715 PF00905 Penicillin binding protein transpeptidase domain BC359_04715 PF03717 Penicillin-binding Protein dimerisation domain BC359_04725 PF10750 Protein of unknown function (DUF2536) BC359_04730 PF08241 Methyltransferase domain BC359_04735 PF01048 Phosphorylase superfamily BC359_04740 PF00291 Pyridoxal-phosphate dependent enzyme BC359_04745 PF01053 Cys/Met metabolism PLP-dependent enzyme BC359_04755 PF04545 Sigma-70, region 4 BC359_04755 PF04542 Sigma-70 region 2 BC359_04765 PF08970 Sporulation inhibitor A BC359_04775 PF01926 50S ribosome-binding GTPase BC359_04785 PF01985 CRS1 / YhbY (CRM) domain BC359_04790 PF01467 Cytidylyltransferase-like BC359_04795 PF01966 HD domain BC359_04805 PF13649 Methyltransferase domain BC359_04810 PF14748 Pyrroline-5-carboxylate reductase dimerisation BC359_04810 PF03807 NADP oxidoreductase coenzyme F420-dependent BC359_04815 PF10531 SLBB domain BC359_04820 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BC359_04825 PF03772 Competence protein BC359_04825 PF13567 Domain of unknown function (DUF4131) BC359_04825 PF00753 Metallo-beta-lactamase superfamily BC359_04830 PF14141 YqzM-like protein BC359_04835 PF06144 DNA polymerase III, delta subunit BC359_04840 PF01649 Ribosomal protein S20 BC359_04845 PF03418 Germination protease BC359_04855 PF00009 Elongation factor Tu GTP binding domain BC359_04855 PF03144 Elongation factor Tu domain 2 BC359_04855 PF00679 Elongation factor G C-terminus BC359_04855 PF06421 GTP-binding protein LepA C-terminus BC359_04860 PF06969 HemN C-terminal domain BC359_04860 PF04055 Radical SAM superfamily BC359_04865 PF01628 HrcA protein C terminal domain BC359_04870 PF01025 GrpE BC359_04875 PF00012 Hsp70 protein BC359_04880 PF01556 DnaJ C terminal domain BC359_04880 PF00684 DnaJ central domain BC359_04880 PF00226 DnaJ domain BC359_04890 PF04452 RNA methyltransferase BC359_04895 PF04055 Radical SAM superfamily BC359_04895 PF00919 Uncharacterized protein family UPF0004 BC359_04895 PF01938 TRAM domain BC359_04900 PF01165 Ribosomal protein S21 BC359_04905 PF09424 Yqey-like protein BC359_04910 PF01957 NfeD-like C-terminal, partner-binding BC359_04910 PF01972 Serine dehydrogenase proteinase BC359_04915 PF12127 SigmaW regulon antibacterial BC359_04925 PF07873 YabP family BC359_04930 PF06898 Putative stage IV sporulation protein YqfD BC359_04935 PF02562 PhoH-like protein BC359_04940 PF07697 7TM-HD extracellular BC359_04940 PF07698 7TM receptor with intracellular HD hydrolase BC359_04940 PF01966 HD domain BC359_04945 PF02130 Uncharacterized protein family UPF0054 BC359_04950 PF01219 Prokaryotic diacylglycerol kinase BC359_04955 PF07650 KH domain BC359_04955 PF01926 50S ribosome-binding GTPase BC359_04960 PF14006 YqzL-like protein BC359_04965 PF11967 Recombination protein O N terminal BC359_04965 PF02565 Recombination protein O C terminal BC359_04970 PF00571 CBS domain BC359_04970 PF08279 HTH domain BC359_04975 PF03618 Kinase/pyrophosphorylase BC359_04980 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 BC359_04985 PF10410 DnaB-helicase binding domain of primase BC359_04985 PF01807 CHC2 zinc finger BC359_04985 PF08275 DNA primase catalytic core, N-terminal domain BC359_04990 PF03979 Sigma-70 factor, region 1.1 BC359_04990 PF04542 Sigma-70 region 2 BC359_04990 PF00140 Sigma-70 factor, region 1.2 BC359_04990 PF04539 Sigma-70 region 3 BC359_04990 PF04545 Sigma-70, region 4 BC359_04995 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BC359_04995 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BC359_04995 PF02770 Acyl-CoA dehydrogenase, middle domain BC359_05000 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BC359_05005 PF04816 tRNA (adenine(22)-N(1))-methyltransferase BC359_05010 PF01784 NIF3 (NGG1p interacting factor 3) BC359_05015 PF02401 LytB protein BC359_05030 PF00271 Helicase conserved C-terminal domain BC359_05030 PF00270 DEAD/DEAH box helicase BC359_05035 PF01261 Xylose isomerase-like TIM barrel BC359_05040 PF11116 Protein of unknown function (DUF2624) BC359_05045 PF00005 ABC transporter BC359_05050 PF00950 ABC 3 transport family BC359_05055 PF01475 Ferric uptake regulator family BC359_05070 PF04551 GcpE protein BC359_05080 PF07690 Major Facilitator Superfamily BC359_05095 PF01895 PhoU domain BC359_05100 PF04306 Protein of unknown function (DUF456) BC359_05130 PF02777 Iron/manganese superoxide dismutases, C-terminal domain BC359_05130 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain BC359_05135 PF07690 Major Facilitator Superfamily BC359_05145 PF12849 PBP superfamily domain BC359_05150 PF00528 Binding-protein-dependent transport system inner membrane component BC359_05155 PF00528 Binding-protein-dependent transport system inner membrane component BC359_05160 PF00005 ABC transporter BC359_05165 PF01895 PhoU domain BC359_05185 PF13439 Glycosyltransferase Family 4 BC359_05185 PF00534 Glycosyl transferases group 1 BC359_05190 PF00483 Nucleotidyl transferase BC359_05195 PF00471 Ribosomal protein L33 BC359_05200 PF01812 5-formyltetrahydrofolate cyclo-ligase family BC359_05210 PF01694 Rhomboid family BC359_05215 PF06014 Bacterial protein of unknown function (DUF910) BC359_05220 PF00480 ROK family BC359_05225 PF00884 Sulfatase BC359_05230 PF01476 LysM domain BC359_05230 PF00246 Zinc carboxypeptidase BC359_05240 PF00753 Metallo-beta-lactamase superfamily BC359_05245 PF11117 Protein of unknown function (DUF2626) BC359_05250 PF03960 ArsC family BC359_05255 PF00437 Type II/IV secretion system protein BC359_05260 PF00482 Type II secretion system (T2SS), protein F BC359_05265 PF07963 Prokaryotic N-terminal methylation motif BC359_05270 PF07963 Prokaryotic N-terminal methylation motif BC359_05295 PF14038 YqzE-like protein BC359_05300 PF11079 Bacterial protein YqhG of unknown function BC359_05305 PF00271 Helicase conserved C-terminal domain BC359_05305 PF00176 SNF2 family N-terminal domain BC359_05310 PF01571 Aminomethyltransferase folate-binding domain BC359_05310 PF08669 Glycine cleavage T-protein C-terminal barrel domain BC359_05315 PF02347 Glycine cleavage system P-protein BC359_05320 PF02347 Glycine cleavage system P-protein BC359_05325 PF00581 Rhodanese-like domain BC359_05330 PF03099 Biotin/lipoate A/B protein ligase family BC359_05335 PF00317 Ribonucleotide reductase, all-alpha domain BC359_05335 PF03477 ATP cone domain BC359_05335 PF02867 Ribonucleotide reductase, barrel domain BC359_05340 PF01325 Iron dependent repressor, N-terminal DNA binding domain BC359_05340 PF02742 Iron dependent repressor, metal binding and dimerisation domain BC359_05350 PF01734 Patatin-like phospholipase BC359_05360 PF07136 Protein of unknown function (DUF1385) BC359_05365 PF11085 Conserved membrane protein YqhR BC359_05370 PF01220 Dehydroquinase class II BC359_05375 PF01321 Creatinase/Prolidase N-terminal domain BC359_05375 PF00557 Metallopeptidase family M24 BC359_05380 PF01132 Elongation factor P (EF-P) OB domain BC359_05380 PF08207 Elongation factor P (EF-P) KOW-like domain BC359_05380 PF09285 Elongation factor P, C-terminal BC359_05385 PF10942 Protein of unknown function (DUF2619) BC359_05395 PF09548 Stage III sporulation protein AB (spore_III_AB) BC359_05400 PF06686 Stage III sporulation protein AC/AD protein family BC359_05405 PF06686 Stage III sporulation protein AC/AD protein family BC359_05410 PF09546 Stage III sporulation protein AE (spore_III_AE) BC359_05415 PF09581 Stage III sporulation protein AF (Spore_III_AF) BC359_05425 PF12685 SpoIIIAH-like protein BC359_05430 PF00364 Biotin-requiring enzyme BC359_05435 PF00289 Biotin carboxylase, N-terminal domain BC359_05435 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BC359_05435 PF02785 Biotin carboxylase C-terminal domain BC359_05440 PF03780 Asp23 family, cell envelope-related function BC359_05445 PF01029 NusB family BC359_05450 PF02601 Exonuclease VII, large subunit BC359_05450 PF13742 OB-fold nucleic acid binding domain BC359_05455 PF02609 Exonuclease VII small subunit BC359_05460 PF00348 Polyprenyl synthetase BC359_05465 PF02780 Transketolase, C-terminal domain BC359_05465 PF02779 Transketolase, pyrimidine binding domain BC359_05465 PF13292 1-deoxy-D-xylulose-5-phosphate synthase BC359_05470 PF01728 FtsJ-like methyltransferase BC359_05470 PF01479 S4 domain BC359_05475 PF01316 Arginine repressor, DNA binding domain BC359_05475 PF02863 Arginine repressor, C-terminal domain BC359_05480 PF13476 AAA domain BC359_05485 PF05580 SpoIVB peptidase S55 BC359_05485 PF17820 PDZ domain BC359_05490 PF08769 Sporulation initiation factor Spo0A C terminal BC359_05490 PF00072 Response regulator receiver domain BC359_05500 PF02652 L-lactate permease BC359_05505 PF00056 lactate/malate dehydrogenase, NAD binding domain BC359_05505 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BC359_05510 PF14174 YycC-like protein BC359_05515 PF03009 Glycerophosphoryl diester phosphodiesterase family BC359_05520 PF11118 Protein of unknown function (DUF2627) BC359_05525 PF00989 PAS fold BC359_05525 PF02954 Bacterial regulatory protein, Fis family BC359_05525 PF00158 Sigma-54 interaction domain BC359_05535 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain BC359_05535 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BC359_05540 PF00871 Acetokinase family BC359_05550 PF00676 Dehydrogenase E1 component BC359_05555 PF02779 Transketolase, pyrimidine binding domain BC359_05555 PF02780 Transketolase, C-terminal domain BC359_05560 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BC359_05560 PF00364 Biotin-requiring enzyme BC359_05560 PF02817 e3 binding domain BC359_05570 PF02310 B12 binding domain BC359_05570 PF01642 Methylmalonyl-CoA mutase BC359_05580 PF06491 Disulphide isomerase BC359_05585 PF00497 Bacterial extracellular solute-binding proteins, family 3 BC359_05590 PF00528 Binding-protein-dependent transport system inner membrane component BC359_05595 PF00005 ABC transporter BC359_05600 PF06081 Aromatic acid exporter family member 1 BC359_05600 PF11728 Putative aromatic acid exporter C-terminal domain BC359_05605 PF03734 L,D-transpeptidase catalytic domain BC359_05615 PF01039 Carboxyl transferase domain BC359_05620 PF01546 Peptidase family M20/M25/M40 BC359_05620 PF07687 Peptidase dimerisation domain BC359_05625 PF07992 Pyridine nucleotide-disulphide oxidoreductase BC359_05625 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster BC359_05630 PF01180 Dihydroorotate dehydrogenase BC359_05635 PF01979 Amidohydrolase family BC359_05655 PF07905 Purine catabolism regulatory protein-like family BC359_05655 PF17853 GGDEF-like domain BC359_05655 PF13556 PucR C-terminal helix-turn-helix domain BC359_05660 PF00171 Aldehyde dehydrogenase family BC359_05665 PF00202 Aminotransferase class-III BC359_05670 PF12706 Beta-lactamase superfamily domain BC359_05670 PF00753 Metallo-beta-lactamase superfamily BC359_05675 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BC359_05680 PF14748 Pyrroline-5-carboxylate reductase dimerisation BC359_05680 PF03807 NADP oxidoreductase coenzyme F420-dependent BC359_05685 PF00753 Metallo-beta-lactamase superfamily BC359_05690 PF00106 short chain dehydrogenase BC359_05700 PF01521 Iron-sulphur cluster biosynthesis BC359_05705 PF00682 HMGL-like BC359_05710 PF00108 Thiolase, N-terminal domain BC359_05710 PF02803 Thiolase, C-terminal domain BC359_05715 PF01144 Coenzyme A transferase BC359_05720 PF01144 Coenzyme A transferase BC359_05730 PF00248 Aldo/keto reductase family BC359_05735 PF00293 NUDIX domain BC359_05740 PF01944 Stage II sporulation protein M BC359_05745 PF01475 Ferric uptake regulator family BC359_05750 PF14004 Protein of unknown function (DUF4227) BC359_05755 PF02899 Phage integrase, N-terminal SAM-like domain BC359_05755 PF00589 Phage integrase family BC359_05760 PF01676 Metalloenzyme superfamily BC359_05765 PF01048 Phosphorylase superfamily BC359_05775 PF00768 D-alanyl-D-alanine carboxypeptidase BC359_05775 PF07943 Penicillin-binding protein 5, C-terminal domain BC359_05780 PF01740 STAS domain BC359_05785 PF13581 Histidine kinase-like ATPase domain BC359_05790 PF04545 Sigma-70, region 4 BC359_05790 PF04539 Sigma-70 region 3 BC359_05790 PF04542 Sigma-70 region 2 BC359_05795 PF12164 Stage V sporulation protein AA BC359_05805 PF03862 SpoVAC/SpoVAEB sporulation membrane protein BC359_05810 PF07451 Stage V sporulation protein AD (SpoVAD) BC359_05815 PF03862 SpoVAC/SpoVAEB sporulation membrane protein BC359_05820 PF14097 Stage V sporulation protein AE1 BC359_05825 PF03323 Bacillus/Clostridium GerA spore germination protein BC359_05835 PF06207 Protein of unknown function (DUF1002) BC359_05840 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD BC359_05845 PF00583 Acetyltransferase (GNAT) family BC359_05850 PF03745 Domain of unknown function (DUF309) BC359_05855 PF02616 Segregation and condensation protein ScpA BC359_05860 PF04079 Segregation and condensation complex subunit ScpB BC359_05865 PF07943 Penicillin-binding protein 5, C-terminal domain BC359_05865 PF00768 D-alanyl-D-alanine carboxypeptidase BC359_05870 PF07670 Nucleoside recognition BC359_05880 PF01609 Transposase DDE domain BC359_05885 PF07670 Nucleoside recognition BC359_05890 PF01479 S4 domain BC359_05890 PF00849 RNA pseudouridylate synthase BC359_05895 PF00578 AhpC/TSA family BC359_05900 PF05140 ResB-like family BC359_05905 PF01578 Cytochrome C assembly protein BC359_05910 PF00072 Response regulator receiver domain BC359_05910 PF00486 Transcriptional regulatory protein, C terminal BC359_05915 PF00672 HAMP domain BC359_05915 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BC359_05915 PF18698 Histidine kinase sensor domain BC359_05915 PF00512 His Kinase A (phospho-acceptor) domain BC359_05915 PF00989 PAS fold BC359_05920 PF01551 Peptidase family M23 BC359_05925 PF01842 ACT domain BC359_05925 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BC359_05925 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain BC359_05930 PF12822 ECF transporter, substrate-specific component BC359_05945 PF00270 DEAD/DEAH box helicase BC359_05945 PF00271 Helicase conserved C-terminal domain BC359_05950 PF10864 Protein of unknown function (DUF2663) BC359_05960 PF00149 Calcineurin-like phosphoesterase BC359_05965 PF13411 MerR HTH family regulatory protein BC359_05970 PF05389 Negative regulator of genetic competence (MecA) BC359_05975 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain BC359_05975 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BC359_05985 PF00710 Asparaginase, N-terminal BC359_05985 PF17763 Glutaminase/Asparaginase C-terminal domain BC359_05990 PF13367 PrsW family intramembrane metalloprotease BC359_05995 PF01471 Putative peptidoglycan binding domain BC359_05995 PF07486 Cell Wall Hydrolase BC359_06010 PF02224 Cytidylate kinase BC359_06015 PF01553 Acyltransferase BC359_06020 PF00575 S1 RNA binding domain BC359_06030 PF07690 Major Facilitator Superfamily BC359_06035 PF14140 YpzI-like protein BC359_06045 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal BC359_06045 PF01926 50S ribosome-binding GTPase BC359_06050 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus BC359_06050 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus BC359_06065 PF09547 Stage IV sporulation protein A (spore_IV_A) BC359_06070 PF00216 Bacterial DNA-binding protein BC359_06075 PF01227 GTP cyclohydrolase I BC359_06080 PF02081 Tryptophan RNA-binding attenuator protein BC359_06085 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 BC359_06090 PF01209 ubiE/COQ5 methyltransferase family BC359_06095 PF00348 Polyprenyl synthetase BC359_06100 PF00334 Nucleoside diphosphate kinase BC359_06105 PF01739 CheR methyltransferase, SAM binding domain BC359_06105 PF03705 CheR methyltransferase, all-alpha domain BC359_06110 PF01264 Chorismate synthase BC359_06115 PF01761 3-dehydroquinate synthase BC359_06120 PF04715 Anthranilate synthase component I, N terminal region BC359_06120 PF00425 chorismate binding enzyme BC359_06125 PF00591 Glycosyl transferase family, a/b domain BC359_06125 PF02885 Glycosyl transferase family, helical bundle domain BC359_06130 PF00218 Indole-3-glycerol phosphate synthase BC359_06135 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase BC359_06140 PF00291 Pyridoxal-phosphate dependent enzyme BC359_06145 PF00290 Tryptophan synthase alpha chain BC359_06150 PF00155 Aminotransferase class I and II BC359_06155 PF01842 ACT domain BC359_06155 PF02153 Prephenate dehydrogenase BC359_06165 PF08864 UPF0302 domain BC359_06165 PF08858 IDEAL domain BC359_06175 PF00355 Rieske [2Fe-2S] domain BC359_06180 PF00033 Cytochrome b/b6/petB BC359_06185 PF13442 Cytochrome C oxidase, cbb3-type, subunit III BC359_06185 PF00032 Cytochrome b(C-terminal)/b6/petD BC359_06190 PF07187 Protein of unknown function (DUF1405) BC359_06200 PF14003 YlbE-like protein BC359_06210 PF06133 Control of competence regulator ComK, YlbF/YmcA BC359_06220 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) BC359_06235 PF01467 Cytidylyltransferase-like BC359_06240 PF07670 Nucleoside recognition BC359_06245 PF01734 Patatin-like phospholipase BC359_06250 PF13180 PDZ domain BC359_06250 PF05362 Lon protease (S16) C-terminal proteolytic domain BC359_06255 PF05636 HIGH Nucleotidyl Transferase BC359_06260 PF02620 Large ribosomal RNA subunit accumulation protein YceD BC359_06265 PF01783 Ribosomal L32p protein family BC359_06270 PF00378 Enoyl-CoA hydratase/isomerase BC359_06280 PF13508 Acetyltransferase (GNAT) domain BC359_06285 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BC359_06285 PF00289 Biotin carboxylase, N-terminal domain BC359_06285 PF02785 Biotin carboxylase C-terminal domain BC359_06290 PF00364 Biotin-requiring enzyme BC359_06295 PF01039 Carboxyl transferase domain BC359_06300 PF02558 Ketopantoate reductase PanE/ApbA BC359_06300 PF08546 Ketopantoate reductase PanE/ApbA C terminal BC359_06310 PF10079 Bacillithiol biosynthesis BshC BC359_06315 PF01795 MraW methylase family BC359_06320 PF04977 Septum formation initiator BC359_06335 PF02875 Mur ligase family, glutamate ligase domain BC359_06335 PF08245 Mur ligase middle domain BC359_06335 PF01225 Mur ligase family, catalytic domain BC359_06340 PF00953 Glycosyl transferase family 4 BC359_06350 PF01098 Cell cycle protein BC359_06355 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain BC359_06355 PF01565 FAD binding domain BC359_06360 PF08478 POTRA domain, FtsQ-type BC359_06365 PF02491 SHS2 domain inserted in FTSA BC359_06370 PF12327 FtsZ family, C-terminal domain BC359_06370 PF00091 Tubulin/FtsZ family, GTPase domain BC359_06375 PF03419 Sporulation factor SpoIIGA BC359_06380 PF04542 Sigma-70 region 2 BC359_06380 PF04545 Sigma-70, region 4 BC359_06385 PF04539 Sigma-70 region 3 BC359_06385 PF04542 Sigma-70 region 2 BC359_06385 PF04545 Sigma-70, region 4 BC359_06390 PF05239 PRC-barrel domain BC359_06400 PF01168 Alanine racemase, N-terminal domain BC359_06405 PF04472 Cell division protein SepF BC359_06410 PF02325 YGGT family BC359_06415 PF17774 Putative RNA-binding domain in YlmH BC359_06415 PF01479 S4 domain BC359_06420 PF05103 DivIVA protein BC359_06425 PF06827 Zinc finger found in FPG and IleRS BC359_06425 PF00133 tRNA synthetases class I (I, L, M and V) BC359_06425 PF08264 Anticodon-binding domain of tRNA BC359_06435 PF01252 Signal peptidase (SPase) II BC359_06440 PF01479 S4 domain BC359_06440 PF00849 RNA pseudouridylate synthase BC359_06445 PF00156 Phosphoribosyl transferase domain BC359_06450 PF00860 Permease family BC359_06455 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BC359_06455 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BC359_06460 PF01979 Amidohydrolase family BC359_06465 PF00117 Glutamine amidotransferase class-I BC359_06465 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain BC359_06470 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BC359_06470 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BC359_06470 PF02142 MGS-like domain BC359_06475 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B BC359_06475 PF00175 Oxidoreductase NAD-binding domain BC359_06480 PF01180 Dihydroorotate dehydrogenase BC359_06485 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family BC359_06490 PF00156 Phosphoribosyl transferase domain BC359_06500 PF00689 Cation transporting ATPase, C-terminus BC359_06500 PF00690 Cation transporter/ATPase, N-terminus BC359_06505 PF08340 Domain of unknown function (DUF1732) BC359_06505 PF03755 YicC-like family, N-terminal region BC359_06510 PF04025 Domain of unknown function (DUF370) BC359_06515 PF00625 Guanylate kinase BC359_06520 PF01192 RNA polymerase Rpb6 BC359_06525 PF04127 DNA / pantothenate metabolism flavoprotein BC359_06525 PF02441 Flavoprotein BC359_06530 PF04851 Type III restriction enzyme, res subunit BC359_06530 PF00271 Helicase conserved C-terminal domain BC359_06530 PF17764 3′ DNA-binding domain (3′BD) BC359_06530 PF18074 Primosomal protein N C-terminal domain BC359_06530 PF18319 PriA DNA helicase Cys-rich region (CRR) domain BC359_06535 PF01327 Polypeptide deformylase BC359_06540 PF00551 Formyl transferase BC359_06540 PF02911 Formyl transferase, C-terminal domain BC359_06545 PF01189 16S rRNA methyltransferase RsmB/F BC359_06545 PF01029 NusB family BC359_06550 PF04055 Radical SAM superfamily BC359_06560 PF00069 Protein kinase domain BC359_06560 PF03793 PASTA domain BC359_06565 PF16745 RsgA N-terminal domain BC359_06565 PF03193 RsgA GTPase BC359_06570 PF00834 Ribulose-phosphate 3 epimerase family BC359_06575 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain BC359_06575 PF04263 Thiamin pyrophosphokinase, catalytic domain BC359_06580 PF08183 Stage V sporulation protein family BC359_06585 PF00830 Ribosomal L28 family BC359_06590 PF03780 Asp23 family, cell envelope-related function BC359_06595 PF02734 DAK2 domain BC359_06595 PF13684 Dihydroxyacetone kinase family BC359_06605 PF03315 Serine dehydratase beta chain BC359_06605 PF01842 ACT domain BC359_06610 PF03313 Serine dehydratase alpha chain BC359_06615 PF00271 Helicase conserved C-terminal domain BC359_06615 PF00270 DEAD/DEAH box helicase BC359_06615 PF17191 RecG wedge domain BC359_06620 PF08279 HTH domain BC359_06620 PF01575 MaoC like domain BC359_06625 PF02504 Fatty acid synthesis protein BC359_06630 PF00698 Acyl transferase domain BC359_06640 PF00550 Phosphopantetheine attachment site BC359_06650 PF06470 SMC proteins Flexible Hinge Domain BC359_06650 PF02463 RecF/RecN/SMC N terminal domain BC359_06655 PF00448 SRP54-type protein, GTPase domain BC359_06655 PF02881 SRP54-type protein, helical bundle domain BC359_06660 PF04297 Putative helix-turn-helix protein, YlxM / p13 like BC359_06665 PF02881 SRP54-type protein, helical bundle domain BC359_06665 PF02978 Signal peptide binding domain BC359_06665 PF00448 SRP54-type protein, GTPase domain BC359_06670 PF00886 Ribosomal protein S16 BC359_06685 PF05239 PRC-barrel domain BC359_06685 PF01782 RimM N-terminal domain BC359_06690 PF01746 tRNA (Guanine-1)-methyltransferase BC359_06695 PF01245 Ribosomal protein L19 BC359_06700 PF10502 Signal peptidase, peptidase S26 BC359_06705 PF01926 50S ribosome-binding GTPase BC359_06710 PF01351 Ribonuclease HII BC359_06720 PF01312 FlhB HrpN YscU SpaS Family BC359_06725 PF00549 CoA-ligase BC359_06725 PF08442 ATP-grasp domain BC359_06730 PF00549 CoA-ligase BC359_06730 PF02629 CoA binding domain BC359_06735 PF02481 DNA recombination-mediator protein A BC359_06740 PF01751 Toprim domain BC359_06740 PF01131 DNA topoisomerase BC359_06740 PF01396 Topoisomerase DNA binding C4 zinc finger BC359_06745 PF01134 Glucose inhibited division protein A BC359_06750 PF00589 Phage integrase family BC359_06750 PF02899 Phage integrase, N-terminal SAM-like domain BC359_06755 PF00227 Proteasome subunit BC359_06760 PF00004 ATPase family associated with various cellular activities (AAA) BC359_06760 PF10431 C-terminal, D2-small domain, of ClpB protein BC359_06760 PF07724 AAA domain (Cdc48 subfamily) BC359_06765 PF08222 CodY helix-turn-helix domain BC359_06765 PF06018 CodY GAF-like domain BC359_06770 PF00460 Flagella basal body rod protein BC359_06775 PF00460 Flagella basal body rod protein BC359_06775 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BC359_06780 PF02049 Flagellar hook-basal body complex protein FliE BC359_06785 PF08345 Flagellar M-ring protein C-terminal BC359_06785 PF01514 Secretory protein of YscJ/FliF family BC359_06790 PF01706 FliG C-terminal domain BC359_06790 PF14841 FliG middle domain BC359_06790 PF14842 FliG N-terminal domain BC359_06795 PF02108 Flagellar assembly protein FliH BC359_06800 PF18269 T3SS EscN ATPase C-terminal domain BC359_06800 PF02874 ATP synthase alpha/beta family, beta-barrel domain BC359_06800 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain BC359_06805 PF02050 Flagellar FliJ protein BC359_06820 PF03963 Flagellar hook capping protein - N-terminal region BC359_06825 PF00460 Flagella basal body rod protein BC359_06825 PF06429 Flagellar basal body rod FlgEFG protein C-terminal BC359_06830 PF06289 Flagellar and Swarming motility proteins BC359_06835 PF03748 Flagellar basal body-associated protein FliL BC359_06840 PF02154 Flagellar motor switch protein FliM BC359_06840 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BC359_06845 PF04509 CheC-like family BC359_06845 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term BC359_06850 PF00072 Response regulator receiver domain BC359_06855 PF04347 Flagellar biosynthesis protein, FliO BC359_06860 PF00813 FliP family BC359_06865 PF01313 Bacterial export proteins, family 3 BC359_06870 PF01311 Bacterial export proteins, family 1 BC359_06875 PF01312 FlhB HrpN YscU SpaS Family BC359_06880 PF00771 FHIPEP family BC359_06885 PF00448 SRP54-type protein, GTPase domain BC359_06890 PF10609 NUBPL iron-transfer P-loop NTPase BC359_06895 PF00072 Response regulator receiver domain BC359_06895 PF01339 CheB methylesterase BC359_06900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BC359_06900 PF01627 Hpt domain BC359_06900 PF07194 P2 response regulator binding domain BC359_06900 PF01584 CheW-like domain BC359_06900 PF02895 Signal transducing histidine kinase, homodimeric domain BC359_06905 PF01584 CheW-like domain BC359_06910 PF04509 CheC-like family BC359_06915 PF03975 CheD chemotactic sensory transduction BC359_06920 PF04542 Sigma-70 region 2 BC359_06920 PF04539 Sigma-70 region 3 BC359_06920 PF04545 Sigma-70, region 4 BC359_06930 PF00318 Ribosomal protein S2 BC359_06935 PF00889 Elongation factor TS BC359_06940 PF00696 Amino acid kinase family BC359_06945 PF01765 Ribosome recycling factor BC359_06950 PF01255 Putative undecaprenyl diphosphate synthase BC359_06960 PF13288 DXP reductoisomerase C-terminal domain BC359_06960 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase BC359_06960 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain BC359_06965 PF13180 PDZ domain BC359_06965 PF02163 Peptidase family M50 BC359_06970 PF04073 Aminoacyl-tRNA editing domain BC359_06970 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BC359_06970 PF03129 Anticodon binding domain BC359_06980 PF01348 Type II intron maturase BC359_06980 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) BC359_06990 PF17384 RimP C-terminal SH3 domain BC359_06990 PF02576 RimP N-terminal domain BC359_06995 PF08529 NusA N-terminal domain BC359_06995 PF00575 S1 RNA binding domain BC359_06995 PF13184 NusA-like KH domain BC359_07000 PF04296 Protein of unknown function (DUF448) BC359_07005 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family BC359_07010 PF04760 Translation initiation factor IF-2, N-terminal region BC359_07010 PF00009 Elongation factor Tu GTP binding domain BC359_07010 PF11987 Translation-initiation factor 2 BC359_07015 PF04456 Protein of unknown function (DUF503) BC359_07020 PF02033 Ribosome-binding factor A BC359_07025 PF01509 TruB family pseudouridylate synthase (N terminal domain) BC359_07025 PF16198 tRNA pseudouridylate synthase B C-terminal domain BC359_07030 PF01687 Riboflavin kinase BC359_07030 PF06574 FAD synthetase BC359_07035 PF00312 Ribosomal protein S15 BC359_07040 PF01138 3' exoribonuclease family, domain 1 BC359_07040 PF00575 S1 RNA binding domain BC359_07040 PF00013 KH domain BC359_07040 PF03725 3' exoribonuclease family, domain 2 BC359_07040 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain BC359_07045 PF01522 Polysaccharide deacetylase BC359_07050 PF05193 Peptidase M16 inactive domain BC359_07050 PF00675 Insulinase (Peptidase family M16) BC359_07055 PF05239 PRC-barrel domain BC359_07060 PF16924 Dipicolinate synthase subunit A N-terminal domain BC359_07060 PF01262 Alanine dehydrogenase/PNT, C-terminal domain BC359_07065 PF02441 Flavoprotein BC359_07070 PF01118 Semialdehyde dehydrogenase, NAD binding domain BC359_07070 PF02774 Semialdehyde dehydrogenase, dimerisation domain BC359_07075 PF00696 Amino acid kinase family BC359_07075 PF13840 ACT domain BC359_07080 PF00701 Dihydrodipicolinate synthetase family BC359_07085 PF13333 Integrase core domain BC359_07085 PF13276 HTH-like domain BC359_07085 PF00665 Integrase core domain BC359_07095 PF00753 Metallo-beta-lactamase superfamily BC359_07095 PF17770 Ribonuclease J C-terminal domain BC359_07095 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain BC359_07100 PF00574 Clp protease BC359_07105 PF14035 YlzJ-like protein BC359_07115 PF01609 Transposase DDE domain BC359_07120 PF07702 UTRA domain BC359_07120 PF00392 Bacterial regulatory proteins, gntR family BC359_07125 PF02608 ABC transporter substrate-binding protein PnrA-like BC359_07145 PF05193 Peptidase M16 inactive domain BC359_07160 PF11588 Protein of unknown function (DUF3243) BC359_07165 PF11868 Protein of unknown function (DUF3388) BC359_07170 PF13464 Domain of unknown function (DUF4115) BC359_07175 PF01066 CDP-alcohol phosphatidyltransferase BC359_07180 PF18146 Damage-inducible protein CinA KH domain BC359_07180 PF00994 Probable molybdopterin binding domain BC359_07180 PF02464 Competence-damaged protein BC359_07185 PF00154 recA bacterial DNA recombination protein BC359_07190 PF12072 Domain of unknown function (DUF3552) BC359_07190 PF01966 HD domain BC359_07190 PF00013 KH domain BC359_07195 PF13277 YmdB-like protein BC359_07200 PF04232 Stage V sporulation protein S (SpoVS) BC359_07210 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II BC359_07210 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase BC359_07210 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg BC359_07215 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BC359_07220 PF00107 Zinc-binding dehydrogenase BC359_07220 PF08240 Alcohol dehydrogenase GroES-like domain BC359_07225 PF00155 Aminotransferase class I and II BC359_07230 PF01938 TRAM domain BC359_07230 PF04055 Radical SAM superfamily BC359_07230 PF00919 Uncharacterized protein family UPF0004 BC359_07235 PF06133 Control of competence regulator ComK, YlbF/YmcA BC359_07240 PF10628 Outer spore coat protein E (CotE) BC359_07245 PF05188 MutS domain II BC359_07245 PF01624 MutS domain I BC359_07245 PF05192 MutS domain III BC359_07245 PF05190 MutS family domain IV BC359_07245 PF00488 MutS domain V BC359_07250 PF01119 DNA mismatch repair protein, C-terminal domain BC359_07250 PF08676 MutL C terminal dimerisation domain BC359_07265 PF17209 Hfq protein BC359_07270 PF17866 AAA lid domain BC359_07270 PF00004 ATPase family associated with various cellular activities (AAA) BC359_07275 PF03458 UPF0126 domain BC359_07280 PF13167 GTP-binding GTPase N-terminal BC359_07280 PF01926 50S ribosome-binding GTPase BC359_07280 PF16360 GTP-binding GTPase Middle Region BC359_07285 PF06838 Methionine gamma-lyase BC359_07290 PF13411 MerR HTH family regulatory protein BC359_07295 PF03951 Glutamine synthetase, beta-Grasp domain BC359_07295 PF00120 Glutamine synthetase, catalytic domain BC359_07300 PF00589 Phage integrase family BC359_07300 PF14659 Phage integrase, N-terminal SAM-like domain BC359_07305 PF06114 IrrE N-terminal-like domain BC359_07320 PF01527 Transposase BC359_07325 PF13276 HTH-like domain BC359_07325 PF00665 Integrase core domain BC359_07325 PF13333 Integrase core domain BC359_07340 PF00665 Integrase core domain BC359_07345 PF01609 Transposase DDE domain BC359_07350 PF08864 UPF0302 domain BC359_07350 PF08858 IDEAL domain BC359_07355 PF00155 Aminotransferase class I and II BC359_07355 PF00392 Bacterial regulatory proteins, gntR family BC359_07360 PF00795 Carbon-nitrogen hydrolase BC359_07365 PF07687 Peptidase dimerisation domain BC359_07365 PF01546 Peptidase family M20/M25/M40 BC359_07375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BC359_07375 PF03466 LysR substrate binding domain BC359_07380 PF00474 Sodium:solute symporter family BC359_07385 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BC359_07385 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BC359_07390 PF02602 Uroporphyrinogen-III synthase HemD BC359_07395 PF00155 Aminotransferase class I and II BC359_07395 PF00392 Bacterial regulatory proteins, gntR family BC359_07400 PF00155 Aminotransferase class I and II BC359_07415 PF01276 Orn/Lys/Arg decarboxylase, major domain BC359_07415 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain BC359_07420 PF10787 Uncharacterised protein from bacillus cereus group BC359_07425 PF00042 Globin BC359_07425 PF00970 Oxidoreductase FAD-binding domain BC359_07425 PF00175 Oxidoreductase NAD-binding domain BC359_07430 PF02082 Transcriptional regulator BC359_07435 PF00175 Oxidoreductase NAD-binding domain BC359_07435 PF00042 Globin BC359_07435 PF00970 Oxidoreductase FAD-binding domain BC359_07440 PF00216 Bacterial DNA-binding protein BC359_07445 PF13610 DDE domain BC359_07450 PF01654 Cytochrome bd terminal oxidase subunit I BC359_07455 PF02322 Cytochrome bd terminal oxidase subunit II BC359_07460 PF01654 Cytochrome bd terminal oxidase subunit I BC359_07465 PF01791 DeoC/LacD family aldolase BC359_07475 PF01609 Transposase DDE domain BC359_07495 PF11553 Protein of unknown function (DUF3231) BC359_07505 PF13520 Amino acid permease BC359_07510 PF01047 MarR family BC359_07515 PF00583 Acetyltransferase (GNAT) family BC359_07525 PF01966 HD domain BC359_07525 PF01966 HD domain BC359_07530 PF07883 Cupin domain BC359_07535 PF07690 Major Facilitator Superfamily BC359_07545 PF03845 Spore germination protein BC359_07565 PF00916 Sulfate permease family BC359_07565 PF01740 STAS domain BC359_07565 PF00916 Sulfate permease family BC359_07565 PF01740 STAS domain BC359_07575 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase BC359_07595 PF01510 N-acetylmuramoyl-L-alanine amidase BC359_07595 PF01471 Putative peptidoglycan binding domain BC359_07605 PF00717 Peptidase S24-like BC359_07605 PF01726 LexA DNA binding domain BC359_07610 PF01476 LysM domain BC359_07615 PF00239 Resolvase, N terminal domain BC359_07620 PF05979 Bacterial protein of unknown function (DUF896) BC359_07625 PF00456 Transketolase, thiamine diphosphate binding domain BC359_07625 PF02780 Transketolase, C-terminal domain BC359_07625 PF02779 Transketolase, pyrimidine binding domain BC359_07630 PF10747 Sporulation inhibitor of replication protein SirA BC359_07635 PF03672 Uncharacterised protein family (UPF0154) BC359_07640 PF00005 ABC transporter BC359_07640 PF00664 ABC transporter transmembrane region BC359_07645 PF00664 ABC transporter transmembrane region BC359_07645 PF00005 ABC transporter BC359_07650 PF02683 Cytochrome C biogenesis protein transmembrane region BC359_07655 PF00072 Response regulator receiver domain BC359_07660 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BC359_07670 PF11084 Protein of unknown function (DUF2621) BC359_07675 PF00202 Aminotransferase class-III BC359_07680 PF00158 Sigma-54 interaction domain BC359_07690 PF00171 Aldehyde dehydrogenase family BC359_07695 PF02554 Carbon starvation protein CstA BC359_07705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BC359_07705 PF13426 PAS domain BC359_07705 PF13188 PAS domain BC359_07705 PF00512 His Kinase A (phospho-acceptor) domain BC359_07705 PF00989 PAS fold BC359_07715 PF03932 CutC family BC359_07720 PF00202 Aminotransferase class-III BC359_07725 PF00282 Pyridoxal-dependent decarboxylase conserved domain BC359_07730 PF06276 Ferric iron reductase FhuF-like transporter BC359_07730 PF04183 IucA / IucC family BC359_07740 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) BC359_07750 PF04183 IucA / IucC family BC359_07750 PF06276 Ferric iron reductase FhuF-like transporter BC359_07760 PF00551 Formyl transferase BC359_07760 PF01842 ACT domain BC359_07765 PF00303 Thymidylate synthase BC359_07770 PF00186 Dihydrofolate reductase BC359_07775 PF01553 Acyltransferase BC359_07780 PF00291 Pyridoxal-phosphate dependent enzyme BC359_07780 PF00585 C-terminal regulatory domain of Threonine dehydratase BC359_07785 PF10751 Protein of unknown function (DUF2535) BC359_07790 PF02645 Uncharacterised protein, DegV family COG1307 BC359_07795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BC359_07795 PF13426 PAS domain BC359_07795 PF00989 PAS fold BC359_07795 PF00512 His Kinase A (phospho-acceptor) domain BC359_07795 PF13188 PAS domain BC359_07800 PF02630 SCO1/SenC BC359_07805 PF13472 GDSL-like Lipase/Acylhydrolase family BC359_07825 PF00989 PAS fold BC359_07825 PF00512 His Kinase A (phospho-acceptor) domain BC359_07825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BC359_07825 PF08447 PAS fold BC359_07835 PF02687 FtsX-like permease family BC359_07840 PF00005 ABC transporter BC359_07845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BC359_07850 PF00072 Response regulator receiver domain BC359_07850 PF00486 Transcriptional regulatory protein, C terminal BC359_07855 PF00375 Sodium:dicarboxylate symporter family BC359_07865 PF01144 Coenzyme A transferase BC359_07870 PF07687 Peptidase dimerisation domain BC359_07870 PF01546 Peptidase family M20/M25/M40 BC359_07880 PF12544 Lysine-2,3-aminomutase BC359_07885 PF14122 YokU-like protein, putative antitoxin BC359_07890 PF01063 Amino-transferase class IV BC359_07895 PF01757 Acyltransferase family BC359_07900 PF06855 YozE SAM-like fold BC359_07910 PF14162 YozD-like protein BC359_07920 PF00069 Protein kinase domain BC359_07925 PF07070 SpoOM protein BC359_07930 PF01569 PAP2 superfamily BC359_07935 PF14191 YodL-like BC359_07940 PF01048 Phosphorylase superfamily BC359_07945 PF00916 Sulfate permease family BC359_07945 PF01740 STAS domain BC359_07955 PF01098 Cell cycle protein BC359_07975 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BC359_07980 PF00874 PRD domain BC359_07980 PF03123 CAT RNA binding domain BC359_07985 PF00367 phosphotransferase system, EIIB BC359_07985 PF02378 Phosphotransferase system, EIIC BC359_07990 PF00294 pfkB family carbohydrate kinase BC359_08010 PF00583 Acetyltransferase (GNAT) family BC359_08015 PF00005 ABC transporter BC359_08025 PF03009 Glycerophosphoryl diester phosphodiesterase family BC359_08040 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BC359_08040 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BC359_08085 PF01476 LysM domain BC359_08085 PF00877 NlpC/P60 family BC359_08090 PF00365 Phosphofructokinase BC359_08095 PF00582 Universal stress protein family BC359_08100 PF02146 Sir2 family BC359_08110 PF01717 Cobalamin-independent synthase, Catalytic domain BC359_08120 PF01595 Cyclin M transmembrane N-terminal domain BC359_08120 PF00571 CBS domain BC359_08120 PF03471 Transporter associated domain BC359_08125 PF00188 Cysteine-rich secretory protein family BC359_08130 PF00924 Mechanosensitive ion channel BC359_08135 PF04239 Protein of unknown function (DUF421) BC359_08140 PF01810 LysE type translocator BC359_08145 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BC359_08155 PF03060 Nitronate monooxygenase BC359_08160 PF00512 His Kinase A (phospho-acceptor) domain BC359_08160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BC359_08165 PF00356 Bacterial regulatory proteins, lacI family BC359_08180 PF00528 Binding-protein-dependent transport system inner membrane component BC359_08185 PF00528 Binding-protein-dependent transport system inner membrane component BC359_08190 PF01380 SIS domain BC359_08195 PF01380 SIS domain BC359_08195 PF01418 Helix-turn-helix domain, rpiR family BC359_08200 PF02378 Phosphotransferase system, EIIC BC359_08200 PF00367 phosphotransferase system, EIIB BC359_08210 PF07075 Protein of unknown function (DUF1343) BC359_08215 PF00933 Glycosyl hydrolase family 3 N terminal domain BC359_08215 PF01915 Glycosyl hydrolase family 3 C-terminal domain BC359_08225 PF00440 Bacterial regulatory proteins, tetR family BC359_08230 PF07690 Major Facilitator Superfamily BC359_08235 PF13302 Acetyltransferase (GNAT) domain BC359_08250 PF01609 Transposase DDE domain BC359_08255 PF00571 CBS domain BC359_08255 PF00005 ABC transporter BC359_08260 PF00528 Binding-protein-dependent transport system inner membrane component BC359_08270 PF03816 Cell envelope-related transcriptional attenuator domain BC359_08280 PF00557 Metallopeptidase family M24 BC359_08280 PF01321 Creatinase/Prolidase N-terminal domain BC359_08285 PF02535 ZIP Zinc transporter BC359_08305 PF13411 MerR HTH family regulatory protein BC359_08305 PF07739 TipAS antibiotic-recognition domain BC359_08310 PF03061 Thioesterase superfamily BC359_08315 PF04122 Putative cell wall binding repeat 2 BC359_08315 PF08486 Stage II sporulation protein BC359_08320 PF00512 His Kinase A (phospho-acceptor) domain BC359_08320 PF00672 HAMP domain BC359_08320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BC359_08325 PF00486 Transcriptional regulatory protein, C terminal BC359_08325 PF00072 Response regulator receiver domain BC359_08330 PF13180 PDZ domain BC359_08340 PF01037 Lrp/AsnC ligand binding domain BC359_08345 PF02254 TrkA-N domain BC359_08345 PF02080 TrkA-C domain BC359_08350 PF02386 Cation transport protein BC359_08360 PF00082 Subtilase family BC359_08365 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BC359_08370 PF01476 LysM domain BC359_08370 PF00877 NlpC/P60 family BC359_08385 PF00535 Glycosyl transferase family 2 BC359_08390 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BC359_08390 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BC359_08390 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BC359_08395 PF00535 Glycosyl transferase family 2 BC359_08400 PF07681 DoxX BC359_08415 PF12732 YtxH-like protein BC359_08425 PF02566 OsmC-like protein BC359_08440 PF00583 Acetyltransferase (GNAT) family BC359_08445 PF07690 Major Facilitator Superfamily BC359_08455 PF05908 Poly-gamma-glutamate hydrolase BC359_08460 PF13977 BetI-type transcriptional repressor, C-terminal BC359_08460 PF00440 Bacterial regulatory proteins, tetR family BC359_08470 PF03741 Integral membrane protein TerC family BC359_08475 PF01757 Acyltransferase family BC359_08480 PF00082 Subtilase family BC359_08485 PF12464 Maltose acetyltransferase BC359_08485 PF14602 Hexapeptide repeat of succinyl-transferase BC359_08490 PF03845 Spore germination protein BC359_08500 PF00686 Starch binding domain BC359_08500 PF01373 Glycosyl hydrolase family 14 BC359_08510 PF00528 Binding-protein-dependent transport system inner membrane component BC359_08515 PF00528 Binding-protein-dependent transport system inner membrane component BC359_08525 PF02583 Metal-sensitive transcriptional repressor BC359_08530 PF00403 Heavy-metal-associated domain BC359_08535 PF00403 Heavy-metal-associated domain BC359_08540 PF05139 Erythromycin esterase BC359_08545 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BC359_08555 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BC359_08555 PF13378 Enolase C-terminal domain-like BC359_08585 PF13302 Acetyltransferase (GNAT) domain BC359_08590 PF02824 TGS domain BC359_08590 PF03129 Anticodon binding domain BC359_08590 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BC359_08590 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BC359_08605 PF09587 Bacterial capsule synthesis protein PGA_cap BC359_08610 PF08713 DNA alkylation repair enzyme BC359_08615 PF00849 RNA pseudouridylate synthase BC359_08615 PF01479 S4 domain BC359_08620 PF01032 FecCD transport family BC359_08625 PF01032 FecCD transport family BC359_08630 PF01497 Periplasmic binding protein BC359_08635 PF00005 ABC transporter BC359_08645 PF01053 Cys/Met metabolism PLP-dependent enzyme BC359_08650 PF05525 Branched-chain amino acid transport protein BC359_08660 PF03806 AbgT putative transporter family BC359_08670 PF01022 Bacterial regulatory protein, arsR family BC359_08685 PF03471 Transporter associated domain BC359_08685 PF00571 CBS domain BC359_08685 PF01595 Cyclin M transmembrane N-terminal domain BC359_08705 PF00557 Metallopeptidase family M24 BC359_08715 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BC359_08720 PF07690 Major Facilitator Superfamily BC359_08740 PF07690 Major Facilitator Superfamily BC359_08750 PF00258 Flavodoxin BC359_08750 PF00175 Oxidoreductase NAD-binding domain BC359_08750 PF00667 FAD binding domain BC359_08755 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BC359_08755 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BC359_08760 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BC359_08785 PF00356 Bacterial regulatory proteins, lacI family BC359_08790 PF01306 LacY proton/sugar symporter BC359_08795 PF00251 Glycosyl hydrolases family 32 N-terminal domain BC359_08795 PF08244 Glycosyl hydrolases family 32 C terminal BC359_08810 PF01323 DSBA-like thioredoxin domain BC359_08835 PF14667 Polysaccharide biosynthesis C-terminal domain BC359_08835 PF01943 Polysaccharide biosynthesis protein BC359_08845 PF08659 KR domain BC359_08845 PF00109 Beta-ketoacyl synthase, N-terminal domain BC359_08845 PF14765 Polyketide synthase dehydratase BC359_08845 PF16197 Ketoacyl-synthetase C-terminal extension BC359_08845 PF08240 Alcohol dehydrogenase GroES-like domain BC359_08845 PF02801 Beta-ketoacyl synthase, C-terminal domain BC359_08845 PF00550 Phosphopantetheine attachment site BC359_08845 PF00698 Acyl transferase domain BC359_08850 PF00465 Iron-containing alcohol dehydrogenase BC359_08860 PF00440 Bacterial regulatory proteins, tetR family BC359_08860 PF13305 Tetracyclin repressor-like, C-terminal domain BC359_08865 PF00753 Metallo-beta-lactamase superfamily BC359_08875 PF01047 MarR family BC359_08880 PF01479 S4 domain BC359_08880 PF00579 tRNA synthetases class I (W and Y) BC359_08900 PF00106 short chain dehydrogenase BC359_08905 PF00465 Iron-containing alcohol dehydrogenase BC359_08920 PF00311 Phosphoenolpyruvate carboxylase BC359_08930 PF00291 Pyridoxal-phosphate dependent enzyme BC359_08935 PF02875 Mur ligase family, glutamate ligase domain BC359_08935 PF01225 Mur ligase family, catalytic domain BC359_08935 PF08245 Mur ligase middle domain BC359_08940 PF07729 FCD domain BC359_08940 PF00392 Bacterial regulatory proteins, gntR family BC359_08945 PF07977 FabA-like domain BC359_08970 PF00313 'Cold-shock' DNA-binding domain BC359_08975 PF03144 Elongation factor Tu domain 2 BC359_08975 PF16658 Class II release factor RF3, C-terminal domain BC359_08975 PF00009 Elongation factor Tu GTP binding domain BC359_08980 PF00893 Small Multidrug Resistance protein BC359_08990 PF05908 Poly-gamma-glutamate hydrolase BC359_09005 PF02694 Uncharacterised BCR, YnfA/UPF0060 family BC359_09010 PF09855 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) BC359_09025 PF00583 Acetyltransferase (GNAT) family BC359_09030 PF03180 NLPA lipoprotein BC359_09035 PF00005 ABC transporter BC359_09035 PF09383 NIL domain BC359_09040 PF00528 Binding-protein-dependent transport system inner membrane component BC359_09045 PF00056 lactate/malate dehydrogenase, NAD binding domain BC359_09045 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain BC359_09075 PF13462 Thioredoxin BC359_09080 PF02600 Disulfide bond formation protein DsbB BC359_09125 PF16884 N-terminal domain of oxidoreductase BC359_09125 PF00107 Zinc-binding dehydrogenase BC359_09145 PF13302 Acetyltransferase (GNAT) domain BC359_09150 PF01925 Sulfite exporter TauE/SafE BC359_09155 PF04203 Sortase domain BC359_09165 PF14166 YueH-like protein BC359_09170 PF02537 CrcB-like protein, Camphor Resistance (CrcB) BC359_09185 PF02583 Metal-sensitive transcriptional repressor BC359_09195 PF02790 Cytochrome C oxidase subunit II, transmembrane domain BC359_09200 PF00115 Cytochrome C and Quinol oxidase polypeptide I BC359_09205 PF00510 Cytochrome c oxidase subunit III BC359_09210 PF03626 Prokaryotic Cytochrome C oxidase subunit IV BC359_09220 PF02673 Bacitracin resistance protein BacA BC359_09235 PF13302 Acetyltransferase (GNAT) domain BC359_09240 PF03816 Cell envelope-related transcriptional attenuator domain BC359_09260 PF12823 Domain of unknown function (DUF3817) BC359_09265 PF13977 BetI-type transcriptional repressor, C-terminal BC359_09265 PF00440 Bacterial regulatory proteins, tetR family BC359_09270 PF00873 AcrB/AcrD/AcrF family BC359_09300 PF03466 LysR substrate binding domain BC359_09300 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BC359_09305 PF00285 Citrate synthase, C-terminal domain BC359_09310 PF03601 Conserved hypothetical protein 698 BC359_09335 PF00781 Diacylglycerol kinase catalytic domain BC359_09355 PF02277 Phosphoribosyltransferase BC359_09370 PF05163 DinB family BC359_09375 PF00209 Sodium:neurotransmitter symporter family BC359_09380 PF18277 AbrB C-terminal domain BC359_09380 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin BC359_09385 PF01609 Transposase DDE domain BC359_09390 PF00253 Ribosomal protein S14p/S29e BC359_09395 PF08239 Bacterial SH3 domain BC359_09395 PF01520 N-acetylmuramoyl-L-alanine amidase BC359_09400 PF08239 Bacterial SH3 domain BC359_09400 PF01520 N-acetylmuramoyl-L-alanine amidase BC359_09425 PF01022 Bacterial regulatory protein, arsR family BC359_09440 PF10502 Signal peptidase, peptidase S26 BC359_09445 PF00724 NADH:flavin oxidoreductase / NADH oxidase family BC359_09450 PF01925 Sulfite exporter TauE/SafE BC359_09475 PF05257 CHAP domain BC359_09475 PF03738 Glutathionylspermidine synthase preATP-grasp BC359_09495 PF00209 Sodium:neurotransmitter symporter family BC359_09505 PF00199 Catalase BC359_09505 PF06628 Catalase-related immune-responsive BC359_09510 PF00877 NlpC/P60 family BC359_09510 PF01476 LysM domain BC359_09515 PF01910 Thiamine-binding protein BC359_09520 PF07905 Purine catabolism regulatory protein-like family BC359_09520 PF13556 PucR C-terminal helix-turn-helix domain BC359_09520 PF17853 GGDEF-like domain BC359_09535 PF00266 Aminotransferase class-V BC359_09545 PF02417 Chromate transporter BC359_09550 PF02417 Chromate transporter BC359_09555 PF01817 Chorismate mutase type II BC359_09555 PF00793 DAHP synthetase I family BC359_09560 PF01264 Chorismate synthase BC359_09565 PF01842 ACT domain BC359_09565 PF02153 Prephenate dehydrogenase BC359_09570 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) BC359_09580 PF00355 Rieske [2Fe-2S] domain BC359_09580 PF01266 FAD dependent oxidoreductase BC359_09590 PF10503 Esterase PHB depolymerase BC359_09595 PF00478 IMP dehydrogenase / GMP reductase domain BC359_09595 PF00571 CBS domain BC359_09605 PF03551 Transcriptional regulator PadR-like family BC359_09610 PF02417 Chromate transporter BC359_09620 PF00571 CBS domain BC359_09620 PF03471 Transporter associated domain BC359_09620 PF01595 Cyclin M transmembrane N-terminal domain BC359_09625 PF09234 Domain of unknown function (DUF1963) BC359_09630 PF07875 Coat F domain BC359_09640 PF00210 Ferritin-like domain BC359_09675 PF00005 ABC transporter BC359_09675 PF00664 ABC transporter transmembrane region BC359_09685 PF13115 YtkA-like BC359_09690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BC359_09690 PF00512 His Kinase A (phospho-acceptor) domain BC359_09690 PF00989 PAS fold BC359_09690 PF16736 Single Cache-like BC359_09695 PF00486 Transcriptional regulatory protein, C terminal BC359_09695 PF00072 Response regulator receiver domain BC359_09700 PF02649 Type I GTP cyclohydrolase folE2 BC359_09705 PF01943 Polysaccharide biosynthesis protein BC359_09710 PF00905 Penicillin binding protein transpeptidase domain BC359_09710 PF00912 Transglycosylase BC359_09715 PF01738 Dienelactone hydrolase family BC359_09720 PF01522 Polysaccharide deacetylase BC359_09730 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase BC359_09735 PF00881 Nitroreductase family BC359_09740 PF01476 LysM domain BC359_09740 PF06725 3D domain BC359_09750 PF02653 Branched-chain amino acid transport system / permease component BC359_09760 PF00005 ABC transporter BC359_09765 PF00005 ABC transporter BC359_09770 PF00547 Urease, gamma subunit BC359_09775 PF00699 Urease beta subunit BC359_09780 PF01979 Amidohydrolase family BC359_09780 PF00449 Urease alpha-subunit, N-terminal domain BC359_09785 PF02814 UreE urease accessory protein, N-terminal domain BC359_09785 PF05194 UreE urease accessory protein, C-terminal domain BC359_09790 PF01730 UreF BC359_09795 PF02492 CobW/HypB/UreG, nucleotide-binding domain BC359_09800 PF01774 UreD urease accessory protein BC359_09815 PF01593 Flavin containing amine oxidoreductase BC359_09820 PF01593 Flavin containing amine oxidoreductase BC359_09830 PF00375 Sodium:dicarboxylate symporter family BC359_09845 PF01717 Cobalamin-independent synthase, Catalytic domain BC359_09845 PF08267 Cobalamin-independent synthase, N-terminal domain BC359_09850 PF01638 HxlR-like helix-turn-helix BC359_09865 PF00474 Sodium:solute symporter family BC359_09870 PF07685 CobB/CobQ-like glutamine amidotransferase domain BC359_09870 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain BC359_09875 PF01032 FecCD transport family BC359_09880 PF00005 ABC transporter BC359_09895 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BC359_09895 PF08028 Acyl-CoA dehydrogenase, C-terminal domain BC359_09895 PF02770 Acyl-CoA dehydrogenase, middle domain BC359_09910 PF00535 Glycosyl transferase family 2 BC359_09915 PF02350 UDP-N-acetylglucosamine 2-epimerase BC359_09920 PF02719 Polysaccharide biosynthesis protein BC359_09930 PF16363 GDP-mannose 4,6 dehydratase BC359_09935 PF13416 Bacterial extracellular solute-binding protein BC359_09940 PF00528 Binding-protein-dependent transport system inner membrane component BC359_09945 PF00528 Binding-protein-dependent transport system inner membrane component BC359_09960 PF00534 Glycosyl transferases group 1 BC359_09960 PF00862 Sucrose synthase BC359_09965 PF00535 Glycosyl transferase family 2 BC359_09975 PF04229 GrpB protein BC359_09975 PF13673 Acetyltransferase (GNAT) domain BC359_10020 PF04235 Protein of unknown function (DUF418) BC359_10030 PF02566 OsmC-like protein BC359_10035 PF02779 Transketolase, pyrimidine binding domain BC359_10035 PF16870 2-oxoglutarate dehydrogenase C-terminal BC359_10035 PF00676 Dehydrogenase E1 component BC359_10040 PF02817 e3 binding domain BC359_10040 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BC359_10040 PF00364 Biotin-requiring enzyme BC359_10045 PF12146 Serine aminopeptidase, S33 BC359_10060 PF05360 yiaA/B two helix domain BC359_10070 PF00375 Sodium:dicarboxylate symporter family BC359_10090 PF04198 Putative sugar-binding domain BC359_10100 PF01791 DeoC/LacD family aldolase BC359_10105 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BC359_10110 PF01773 Na+ dependent nucleoside transporter N-terminus BC359_10110 PF07662 Na+ dependent nucleoside transporter C-terminus BC359_10115 PF02293 AmiS/UreI family transporter BC359_10120 PF02073 Thermophilic metalloprotease (M29) BC359_10160 PF05525 Branched-chain amino acid transport protein BC359_10170 PF00565 Staphylococcal nuclease homologue BC359_10180 PF00072 Response regulator receiver domain BC359_10180 PF04397 LytTr DNA-binding domain BC359_10185 PF00356 Bacterial regulatory proteins, lacI family BC359_10190 PF01261 Xylose isomerase-like TIM barrel BC359_10195 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BC359_10195 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BC359_10200 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BC359_10200 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BC359_10205 PF01261 Xylose isomerase-like TIM barrel BC359_10210 PF07690 Major Facilitator Superfamily BC359_10220 PF00465 Iron-containing alcohol dehydrogenase BC359_10230 PF00248 Aldo/keto reductase family BC359_10235 PF00085 Thioredoxin BC359_10250 PF00155 Aminotransferase class I and II BC359_10250 PF03744 6-carboxyhexanoate--CoA ligase BC359_10260 PF00202 Aminotransferase class-III BC359_10265 PF01699 Sodium/calcium exchanger protein BC359_10275 PF00753 Metallo-beta-lactamase superfamily BC359_10275 PF16123 Hydroxyacylglutathione hydrolase C-terminus BC359_10280 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BC359_10290 PF00528 Binding-protein-dependent transport system inner membrane component BC359_10295 PF00005 ABC transporter BC359_10300 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BC359_10300 PF00005 ABC transporter BC359_10310 PF01381 Helix-turn-helix BC359_10310 PF07883 Cupin domain BC359_10325 PF01810 LysE type translocator BC359_10330 PF01545 Cation efflux family BC359_10330 PF16916 Dimerisation domain of Zinc Transporter BC359_10370 PF00892 EamA-like transporter family BC359_10380 PF06751 Ethanolamine ammonia lyase large subunit (EutB) BC359_10385 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin BC359_10390 PF00083 Sugar (and other) transporter BC359_10400 PF04143 Sulphur transport BC359_10410 PF07690 Major Facilitator Superfamily BC359_10445 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BC359_10450 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BC359_10450 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BC359_10460 PF04239 Protein of unknown function (DUF421) BC359_10500 PF07690 Major Facilitator Superfamily BC359_10505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BC359_10505 PF03466 LysR substrate binding domain BC359_10525 PF12833 Helix-turn-helix domain BC359_10525 PF02311 AraC-like ligand binding domain BC359_10560 PF13474 SnoaL-like domain BC359_10585 PF02378 Phosphotransferase system, EIIC BC359_10585 PF00367 phosphotransferase system, EIIB BC359_10610 PF00892 EamA-like transporter family BC359_10615 PF13302 Acetyltransferase (GNAT) domain BC359_10670 PF00583 Acetyltransferase (GNAT) family BC359_10680 PF01609 Transposase DDE domain BC359_10685 PF00583 Acetyltransferase (GNAT) family BC359_10690 PF09297 NADH pyrophosphatase zinc ribbon domain BC359_10690 PF00293 NUDIX domain BC359_10705 PF00248 Aldo/keto reductase family BC359_10720 PF04439 Streptomycin adenylyltransferase BC359_10730 PF06713 Bacterial PH domain BC359_10735 PF13302 Acetyltransferase (GNAT) domain BC359_10740 PF16888 Domain of unknown function (DUF5082) BC359_10750 PF04740 LXG domain of WXG superfamily BC359_10750 PF14449 Pre-toxin TG BC359_10750 PF14431 YwqJ-like deaminase BC359_10825 PF04740 LXG domain of WXG superfamily BC359_10875 PF01966 HD domain BC359_10875 PF01743 Poly A polymerase head domain BC359_10875 PF12627 Probable RNA and SrmB- binding site of polymerase A BC359_10900 PF02583 Metal-sensitive transcriptional repressor BC359_10905 PF01206 Sulfurtransferase TusA BC359_10910 PF13686 DsrE/DsrF/DrsH-like family BC359_10915 PF00581 Rhodanese-like domain BC359_10920 PF01206 Sulfurtransferase TusA BC359_10920 PF00581 Rhodanese-like domain BC359_10925 PF00581 Rhodanese-like domain BC359_10925 PF00753 Metallo-beta-lactamase superfamily BC359_10930 PF01206 Sulfurtransferase TusA BC359_10935 PF01925 Sulfite exporter TauE/SafE BC359_10940 PF01040 UbiA prenyltransferase family BC359_10950 PF00440 Bacterial regulatory proteins, tetR family BC359_10950 PF17932 Tetracyclin repressor-like, C-terminal domain BC359_10955 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain BC359_10955 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain BC359_10965 PF02771 Acyl-CoA dehydrogenase, N-terminal domain BC359_10965 PF02770 Acyl-CoA dehydrogenase, middle domain BC359_10965 PF00441 Acyl-CoA dehydrogenase, C-terminal domain BC359_10970 PF00107 Zinc-binding dehydrogenase BC359_10970 PF08240 Alcohol dehydrogenase GroES-like domain BC359_11000 PF01906 Putative heavy-metal-binding BC359_11015 PF07501 G5 domain BC359_11015 PF06725 3D domain BC359_11015 PF03990 G5-linked-Ubiquitin-like domain BC359_11025 PF13091 PLD-like domain BC359_11025 PF13396 Phospholipase_D-nuclease N-terminal BC359_11030 PF01380 SIS domain BC359_11030 PF01418 Helix-turn-helix domain, rpiR family BC359_11035 PF01609 Transposase DDE domain BC359_11040 PF00232 Glycosyl hydrolase family 1 BC359_11060 PF06039 Malate:quinone oxidoreductase (Mqo) BC359_11075 PF03992 Antibiotic biosynthesis monooxygenase BC359_11080 PF00313 'Cold-shock' DNA-binding domain BC359_11085 PF00144 Beta-lactamase BC359_11095 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain BC359_11095 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase BC359_11100 PF03466 LysR substrate binding domain BC359_11100 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BC359_11125 PF01266 FAD dependent oxidoreductase BC359_11135 PF01266 FAD dependent oxidoreductase BC359_11160 PF12706 Beta-lactamase superfamily domain BC359_11205 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain BC359_11205 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain BC359_11210 PF00923 Transaldolase/Fructose-6-phosphate aldolase BC359_11220 PF01740 STAS domain BC359_11230 PF13538 UvrD-like helicase C-terminal domain BC359_11240 PF07486 Cell Wall Hydrolase BC359_11255 PF05036 Sporulation related domain BC359_11255 PF01520 N-acetylmuramoyl-L-alanine amidase BC359_11300 PF02954 Bacterial regulatory protein, Fis family BC359_11300 PF00158 Sigma-54 interaction domain BC359_11300 PF00072 Response regulator receiver domain BC359_11305 PF00004 ATPase family associated with various cellular activities (AAA) BC359_11315 PF04542 Sigma-70 region 2 BC359_11315 PF08281 Sigma-70, region 4 BC359_11320 PF00183 Hsp90 protein BC359_11325 PF12146 Serine aminopeptidase, S33 BC359_11330 PF12650 Domain of unknown function (DUF3784) BC359_11350 PF07859 alpha/beta hydrolase fold BC359_11355 PF00067 Cytochrome P450 BC359_11360 PF03737 Aldolase/RraA BC359_11370 PF00149 Calcineurin-like phosphoesterase BC359_11375 PF13302 Acetyltransferase (GNAT) domain BC359_11380 PF03576 Peptidase family S58 BC359_11395 PF13193 AMP-binding enzyme C-terminal domain BC359_11395 PF00501 AMP-binding enzyme BC359_11400 PF04294 VanW like protein BC359_11405 PF01047 MarR family BC359_11410 PF00501 AMP-binding enzyme BC359_11410 PF13193 AMP-binding enzyme C-terminal domain BC359_11425 PF13460 NAD(P)H-binding BC359_11430 PF00293 NUDIX domain BC359_11445 PF00929 Exonuclease BC359_11450 PF00583 Acetyltransferase (GNAT) family BC359_11455 PF00795 Carbon-nitrogen hydrolase BC359_11455 PF00583 Acetyltransferase (GNAT) family BC359_11465 PF00877 NlpC/P60 family BC359_11470 PF02602 Uroporphyrinogen-III synthase HemD BC359_11475 PF01614 Bacterial transcriptional regulator BC359_11475 PF09339 IclR helix-turn-helix domain BC359_11480 PF02785 Biotin carboxylase C-terminal domain BC359_11480 PF00289 Biotin carboxylase, N-terminal domain BC359_11480 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BC359_11485 PF00364 Biotin-requiring enzyme BC359_11490 PF02626 Carboxyltransferase domain, subdomain A and B BC359_11495 PF02682 Carboxyltransferase domain, subdomain C and D BC359_11500 PF07286 Protein of unknown function (DUF1445) BC359_11505 PF01566 Natural resistance-associated macrophage protein BC359_11510 PF03746 LamB/YcsF family BC359_11515 PF00877 NlpC/P60 family BC359_11530 PF00176 SNF2 family N-terminal domain BC359_11530 PF00271 Helicase conserved C-terminal domain BC359_11530 PF04434 SWIM zinc finger BC359_11535 PF00196 Bacterial regulatory proteins, luxR family BC359_11535 PF00072 Response regulator receiver domain BC359_11540 PF07730 Histidine kinase BC359_11540 PF13185 GAF domain BC359_11555 PF00920 Dehydratase family BC359_11560 PF02833 DHHA2 domain BC359_11560 PF01368 DHH family BC359_11575 PF01063 Amino-transferase class IV BC359_11585 PF00860 Permease family BC359_11590 PF01014 Uricase BC359_11590 PF09349 OHCU decarboxylase BC359_11595 PF00576 HIUase/Transthyretin family BC359_11600 PF00583 Acetyltransferase (GNAT) family BC359_11625 PF00589 Phage integrase family BC359_11625 PF02899 Phage integrase, N-terminal SAM-like domain BC359_11640 PF09515 Thiamine transporter protein (Thia_YuaJ) BC359_11650 PF00857 Isochorismatase family BC359_11660 PF08892 YqcI/YcgG family BC359_11665 PF00561 alpha/beta hydrolase fold BC359_11665 PF08386 TAP-like protein BC359_11675 PF01751 Toprim domain BC359_11675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BC359_11675 PF00986 DNA gyrase B subunit, carboxyl terminus BC359_11675 PF00204 DNA gyrase B BC359_11680 PF13380 CoA binding domain BC359_11685 PF02660 Glycerol-3-phosphate acyltransferase BC359_11690 PF01521 Iron-sulphur cluster biosynthesis BC359_11695 PF03061 Thioesterase superfamily BC359_11710 PF08177 Small acid-soluble spore protein N family BC359_11715 PF00578 AhpC/TSA family BC359_11720 PF00330 Aconitase family (aconitate hydratase) BC359_11720 PF00694 Aconitase C-terminal domain BC359_11735 PF08179 Small acid-soluble spore protein P family BC359_11745 PF02735 Ku70/Ku80 beta-barrel domain BC359_11780 PF07690 Major Facilitator Superfamily BC359_11785 PF03631 Virulence factor BrkB BC359_11795 PF07690 Major Facilitator Superfamily BC359_11800 PF13411 MerR HTH family regulatory protein BC359_11805 PF00916 Sulfate permease family BC359_11805 PF01740 STAS domain BC359_11820 PF00512 His Kinase A (phospho-acceptor) domain BC359_11820 PF00672 HAMP domain BC359_11820 PF13426 PAS domain BC359_11820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BC359_11825 PF00583 Acetyltransferase (GNAT) family BC359_11845 PF07454 Stage II sporulation protein P (SpoIIP) BC359_11850 PF13426 PAS domain BC359_11850 PF13188 PAS domain BC359_11850 PF00989 PAS fold BC359_11850 PF00512 His Kinase A (phospho-acceptor) domain BC359_11850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BC359_11855 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BC359_11860 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain BC359_11860 PF07685 CobB/CobQ-like glutamine amidotransferase domain BC359_11870 PF00909 Ammonium Transporter Family BC359_11880 PF07849 Protein of unknown function (DUF1641) BC359_11885 PF07992 Pyridine nucleotide-disulphide oxidoreductase BC359_11900 PF00528 Binding-protein-dependent transport system inner membrane component BC359_11910 PF00005 ABC transporter BC359_11915 PF02633 Creatinine amidohydrolase BC359_11920 PF00296 Luciferase-like monooxygenase BC359_11935 PF02585 GlcNAc-PI de-N-acetylase BC359_11940 PF00534 Glycosyl transferases group 1 BC359_11940 PF13439 Glycosyltransferase Family 4 BC359_11955 PF13477 Glycosyl transferase 4-like BC359_11955 PF00534 Glycosyl transferases group 1 BC359_11960 PF16363 GDP-mannose 4,6 dehydratase BC359_11985 PF07687 Peptidase dimerisation domain BC359_11985 PF01546 Peptidase family M20/M25/M40 BC359_11990 PF16800 IseA DL-endopeptidase inhibitor BC359_11995 PF00583 Acetyltransferase (GNAT) family BC359_12000 PF00296 Luciferase-like monooxygenase BC359_12010 PF09335 SNARE associated Golgi protein BC359_12015 PF01554 MatE BC359_12025 PF08439 Oligopeptidase F BC359_12025 PF01432 Peptidase family M3 BC359_12030 PF03372 Endonuclease/Exonuclease/phosphatase family BC359_12035 PF02872 5'-nucleotidase, C-terminal domain BC359_12035 PF00149 Calcineurin-like phosphoesterase BC359_12050 PF03631 Virulence factor BrkB BC359_12060 PF03176 MMPL family BC359_12085 PF00171 Aldehyde dehydrogenase family BC359_12090 PF00696 Amino acid kinase family BC359_12090 PF01472 PUA domain BC359_12095 PF03807 NADP oxidoreductase coenzyme F420-dependent BC359_12095 PF14748 Pyrroline-5-carboxylate reductase dimerisation BC359_12100 PF00072 Response regulator receiver domain BC359_12100 PF01339 CheB methylesterase BC359_12120 PF06725 3D domain BC359_12120 PF01476 LysM domain BC359_12130 PF01047 MarR family BC359_12135 PF02566 OsmC-like protein BC359_12140 PF00817 impB/mucB/samB family BC359_12140 PF11798 IMS family HHH motif BC359_12140 PF11799 impB/mucB/samB family C-terminal domain BC359_12160 PF00005 ABC transporter BC359_12165 PF00392 Bacterial regulatory proteins, gntR family BC359_12170 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BC359_12170 PF03466 LysR substrate binding domain BC359_12175 PF00005 ABC transporter BC359_12180 PF08000 Bacterial PH domain BC359_12185 PF05067 Manganese containing catalase BC359_12190 PF01411 tRNA synthetases class II (A) BC359_12190 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain BC359_12190 PF02272 DHHA1 domain BC359_12195 PF01040 UbiA prenyltransferase family BC359_12215 PF00149 Calcineurin-like phosphoesterase BC359_12225 PF01751 Toprim domain BC359_12225 PF01131 DNA topoisomerase BC359_12245 PF11132 Transcriptional regulator protein (SplA) BC359_12250 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BC359_12250 PF00356 Bacterial regulatory proteins, lacI family BC359_12270 PF00005 ABC transporter BC359_12275 PF11071 Nucleoside 2-deoxyribosyltransferase YtoQ BC359_12280 PF12848 ABC transporter BC359_12280 PF00005 ABC transporter BC359_12285 PF03976 Polyphosphate kinase 2 (PPK2) BC359_12290 PF00296 Luciferase-like monooxygenase BC359_12295 PF08279 HTH domain BC359_12295 PF13280 WYL domain BC359_12305 PF07690 Major Facilitator Superfamily BC359_12315 PF05651 Putative sugar diacid recognition BC359_12315 PF13556 PucR C-terminal helix-turn-helix domain BC359_12315 PF17853 GGDEF-like domain BC359_12325 PF02754 Cysteine-rich domain BC359_12325 PF13183 4Fe-4S dicluster domain BC359_12330 PF02540 NAD synthase BC359_12335 PF01467 Cytidylyltransferase-like BC359_12340 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain BC359_12340 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family BC359_12340 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain BC359_12345 PF00857 Isochorismatase family BC359_12350 PF00293 NUDIX domain BC359_12360 PF00664 ABC transporter transmembrane region BC359_12360 PF00005 ABC transporter BC359_12395 PF00534 Glycosyl transferases group 1 BC359_12395 PF08323 Starch synthase catalytic domain BC359_12410 PF08671 Anti-repressor SinI BC359_12410 PF01381 Helix-turn-helix BC359_12415 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family BC359_12420 PF00132 Bacterial transferase hexapeptide (six repeats) BC359_12420 PF17836 PglD N-terminal domain BC359_12425 PF02397 Bacterial sugar transferase BC359_12435 PF16363 GDP-mannose 4,6 dehydratase BC359_12445 PF00535 Glycosyl transferase family 2 BC359_12450 PF00534 Glycosyl transferases group 1 BC359_12450 PF13439 Glycosyltransferase Family 4 BC359_12455 PF00534 Glycosyl transferases group 1 BC359_12455 PF13439 Glycosyltransferase Family 4 BC359_12460 PF02719 Polysaccharide biosynthesis protein BC359_12465 PF13614 AAA domain BC359_12470 PF02706 Chain length determinant protein BC359_12470 PF13807 G-rich domain on putative tyrosine kinase BC359_12475 PF01381 Helix-turn-helix BC359_12475 PF08671 Anti-repressor SinI BC359_12485 PF04294 VanW like protein BC359_12490 PF01266 FAD dependent oxidoreductase BC359_12515 PF13249 Squalene-hopene cyclase N-terminal domain BC359_12515 PF13243 Squalene-hopene cyclase C-terminal domain BC359_12520 PF00005 ABC transporter BC359_12530 PF12833 Helix-turn-helix domain BC359_12535 PF00703 Glycosyl hydrolases family 2 BC359_12535 PF02837 Glycosyl hydrolases family 2, sugar binding domain BC359_12535 PF16353 Domain of unknown function(DUF4981) BC359_12535 PF02929 Beta galactosidase small chain BC359_12535 PF02836 Glycosyl hydrolases family 2, TIM barrel domain BC359_12545 PF00092 von Willebrand factor type A domain BC359_12550 PF07728 AAA domain (dynein-related subfamily) BC359_12560 PF04542 Sigma-70 region 2 BC359_12560 PF08281 Sigma-70, region 4 BC359_12565 PF13800 Sigma factor regulator N-terminal BC359_12565 PF13791 Sigma factor regulator C-terminal BC359_12580 PF16242 Pyridoxamine 5'-phosphate oxidase like BC359_12585 PF02581 Thiamine monophosphate synthase BC359_12590 PF02110 Hydroxyethylthiazole kinase family BC359_12600 PF07690 Major Facilitator Superfamily BC359_12605 PF02245 Methylpurine-DNA glycosylase (MPG) BC359_12615 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BC359_12615 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BC359_12620 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BC359_12620 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BC359_12630 PF00356 Bacterial regulatory proteins, lacI family BC359_12635 PF07486 Cell Wall Hydrolase BC359_12640 PF00209 Sodium:neurotransmitter symporter family BC359_12660 PF03070 TENA/THI-4/PQQC family BC359_12665 PF00171 Aldehyde dehydrogenase family BC359_12670 PF01022 Bacterial regulatory protein, arsR family BC359_12675 PF00106 short chain dehydrogenase BC359_12685 PF01156 Inosine-uridine preferring nucleoside hydrolase BC359_12695 PF00080 Copper/zinc superoxide dismutase (SODC) BC359_12705 PF00696 Amino acid kinase family BC359_12705 PF13840 ACT domain BC359_12710 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BC359_12710 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BC359_12715 PF00294 pfkB family carbohydrate kinase BC359_12720 PF08220 DeoR-like helix-turn-helix domain BC359_12720 PF00455 DeoR C terminal sensor domain BC359_12730 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BC359_12730 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BC359_12740 PF04239 Protein of unknown function (DUF421) BC359_12745 PF13396 Phospholipase_D-nuclease N-terminal BC359_12745 PF13091 PLD-like domain BC359_12750 PF04239 Protein of unknown function (DUF421) BC359_12760 PF03862 SpoVAC/SpoVAEB sporulation membrane protein BC359_12765 PF07451 Stage V sporulation protein AD (SpoVAD) BC359_12770 PF03862 SpoVAC/SpoVAEB sporulation membrane protein BC359_12785 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) BC359_12795 PF00672 HAMP domain BC359_12795 PF18698 Histidine kinase sensor domain BC359_12795 PF00512 His Kinase A (phospho-acceptor) domain BC359_12795 PF00989 PAS fold BC359_12795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BC359_12800 PF00486 Transcriptional regulatory protein, C terminal BC359_12800 PF00072 Response regulator receiver domain BC359_12805 PF00483 Nucleotidyl transferase BC359_12810 PF04138 GtrA-like protein BC359_12815 PF00535 Glycosyl transferase family 2 BC359_12825 PF05067 Manganese containing catalase BC359_12830 PF10842 Protein of unknown function (DUF2642) BC359_12845 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain BC359_12845 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain BC359_12850 PF01594 AI-2E family transporter BC359_12855 PF00171 Aldehyde dehydrogenase family BC359_12875 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster BC359_12875 PF07992 Pyridine nucleotide-disulphide oxidoreductase BC359_12880 PF00310 Glutamine amidotransferases class-II BC359_12880 PF01493 GXGXG motif BC359_12880 PF01645 Conserved region in glutamate synthase BC359_12880 PF04898 Glutamate synthase central domain BC359_12885 PF03466 LysR substrate binding domain BC359_12885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BC359_12895 PF13039 Protein of unknown function (DUF3900) BC359_12895 PF13037 Domain of unknown function (DUF3898) BC359_12900 PF00313 'Cold-shock' DNA-binding domain BC359_12910 PF05167 Uncharacterised ACR (DUF711) BC359_12925 PF03703 Bacterial PH domain BC359_12930 PF03949 Malic enzyme, NAD binding domain BC359_12930 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BC359_12930 PF00390 Malic enzyme, N-terminal domain BC359_12935 PF10415 Fumarase C C-terminus BC359_12935 PF00206 Lyase BC359_12940 PF03641 Possible lysine decarboxylase BC359_12960 PF03949 Malic enzyme, NAD binding domain BC359_12960 PF00390 Malic enzyme, N-terminal domain BC359_12975 PF00854 POT family BC359_12980 PF01979 Amidohydrolase family BC359_12985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BC359_12985 PF00512 His Kinase A (phospho-acceptor) domain BC359_12985 PF18719 ArlS sensor domain BC359_12990 PF00486 Transcriptional regulatory protein, C terminal BC359_12990 PF00072 Response regulator receiver domain BC359_12995 PF05698 Bacterial trigger factor protein (TF) C-terminus BC359_13005 PF00324 Amino acid permease BC359_13010 PF03553 Na+/H+ antiporter family BC359_13015 PF09844 Uncharacterized conserved protein (COG2071) BC359_13025 PF13677 Membrane MotB of proton-channel complex MotA/MotB BC359_13025 PF00691 OmpA family BC359_13030 PF01618 MotA/TolQ/ExbB proton channel family BC359_13040 PF00667 FAD binding domain BC359_13040 PF00067 Cytochrome P450 BC359_13040 PF00175 Oxidoreductase NAD-binding domain BC359_13040 PF00258 Flavodoxin BC359_13045 PF00171 Aldehyde dehydrogenase family BC359_13050 PF00375 Sodium:dicarboxylate symporter family BC359_13060 PF04389 Peptidase family M28 BC359_13060 PF02225 PA domain BC359_13065 PF00999 Sodium/hydrogen exchanger family BC359_13065 PF03471 Transporter associated domain BC359_13065 PF02080 TrkA-C domain BC359_13085 PF05816 Toxic anion resistance protein (TelA) BC359_13095 PF00884 Sulfatase BC359_13115 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin BC359_13115 PF18277 AbrB C-terminal domain BC359_13120 PF02334 Replication terminator protein BC359_13140 PF04542 Sigma-70 region 2 BC359_13140 PF08281 Sigma-70, region 4 BC359_13145 PF04134 Protein of unknown function, DUF393 BC359_13150 PF14748 Pyrroline-5-carboxylate reductase dimerisation BC359_13150 PF03807 NADP oxidoreductase coenzyme F420-dependent BC359_13155 PF02585 GlcNAc-PI de-N-acetylase BC359_13160 PF08830 Protein of unknown function (DUF1806) BC359_13165 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain BC359_13165 PF01367 5'-3' exonuclease, C-terminal SAM fold BC359_13180 PF02558 Ketopantoate reductase PanE/ApbA BC359_13180 PF08546 Ketopantoate reductase PanE/ApbA C terminal BC359_13185 PF02492 CobW/HypB/UreG, nucleotide-binding domain BC359_13185 PF07683 Cobalamin synthesis protein cobW C-terminal domain BC359_13190 PF13411 MerR HTH family regulatory protein BC359_13195 PF00892 EamA-like transporter family BC359_13200 PF01923 Cobalamin adenosyltransferase BC359_13210 PF00300 Histidine phosphatase superfamily (branch 1) BC359_13215 PF02654 Cobalamin-5-phosphate synthase BC359_13225 PF00155 Aminotransferase class I and II BC359_13230 PF03186 CobD/Cbib protein BC359_13240 PF01497 Periplasmic binding protein BC359_13250 PF00085 Thioredoxin BC359_13260 PF14005 YpjP-like protein BC359_13265 PF04445 Putative SAM-dependent methyltransferase BC359_13270 PF06491 Disulphide isomerase BC359_13275 PF01522 Polysaccharide deacetylase BC359_13280 PF13769 Virulence factor BC359_13280 PF08712 Scaffold protein Nfu/NifU N terminal BC359_13285 PF12848 ABC transporter BC359_13285 PF00005 ABC transporter BC359_13285 PF16326 ABC transporter C-terminal domain BC359_13290 PF01966 HD domain BC359_13295 PF00255 Glutathione peroxidase BC359_13305 PF01268 Formate--tetrahydrofolate ligase BC359_13310 PF04204 Homoserine O-succinyltransferase BC359_13315 PF05036 Sporulation related domain BC359_13315 PF01520 N-acetylmuramoyl-L-alanine amidase BC359_13320 PF08241 Methyltransferase domain BC359_13335 PF00480 ROK family BC359_13335 PF01325 Iron dependent repressor, N-terminal DNA binding domain BC359_13340 PF13416 Bacterial extracellular solute-binding protein BC359_13345 PF00128 Alpha amylase, catalytic domain BC359_13345 PF16657 Maltogenic Amylase, C-terminal domain BC359_13345 PF02903 Alpha amylase, N-terminal ig-like domain BC359_13355 PF01872 RibD C-terminal domain BC359_13355 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region BC359_13360 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase BC359_13360 PF00925 GTP cyclohydrolase II BC359_13365 PF07690 Major Facilitator Superfamily BC359_13380 PF07690 Major Facilitator Superfamily BC359_13395 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase BC359_13410 PF00665 Integrase core domain BC359_13410 PF13276 HTH-like domain BC359_13410 PF13333 Integrase core domain BC359_13420 PF00248 Aldo/keto reductase family BC359_13440 PF12650 Domain of unknown function (DUF3784) BC359_13450 PF01554 MatE BC359_13455 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BC359_13455 PF00005 ABC transporter BC359_13460 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BC359_13460 PF00005 ABC transporter BC359_13470 PF00528 Binding-protein-dependent transport system inner membrane component BC359_13475 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BC359_13495 PF00403 Heavy-metal-associated domain BC359_13515 PF01451 Low molecular weight phosphotyrosine protein phosphatase BC359_13520 PF02040 Arsenical pump membrane protein BC359_13525 PF01022 Bacterial regulatory protein, arsR family BC359_13535 PF01022 Bacterial regulatory protein, arsR family BC359_13540 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BC359_13550 PF03358 NADPH-dependent FMN reductase BC359_13555 PF01613 Flavin reductase like domain BC359_13565 PF07690 Major Facilitator Superfamily BC359_13570 PF07563 Protein of unknown function (DUF1541) BC359_13575 PF00486 Transcriptional regulatory protein, C terminal BC359_13575 PF00072 Response regulator receiver domain BC359_13580 PF00672 HAMP domain BC359_13580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BC359_13580 PF00512 His Kinase A (phospho-acceptor) domain BC359_13580 PF13426 PAS domain BC359_13585 PF00561 alpha/beta hydrolase fold BC359_13600 PF00072 Response regulator receiver domain BC359_13600 PF00196 Bacterial regulatory proteins, luxR family BC359_13605 PF07730 Histidine kinase BC359_13610 PF00487 Fatty acid desaturase BC359_13615 PF02811 PHP domain BC359_13620 PF03773 Predicted permease BC359_13635 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BC359_13635 PF00005 ABC transporter BC359_13640 PF00877 NlpC/P60 family BC359_13650 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BC359_13655 PF00005 ABC transporter BC359_13655 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BC359_13660 PF12911 N-terminal TM domain of oligopeptide transport permease C BC359_13660 PF00528 Binding-protein-dependent transport system inner membrane component BC359_13665 PF00528 Binding-protein-dependent transport system inner membrane component BC359_13670 PF04951 D-aminopeptidase BC359_13695 PF07690 Major Facilitator Superfamily BC359_13700 PF01773 Na+ dependent nucleoside transporter N-terminus BC359_13700 PF07662 Na+ dependent nucleoside transporter C-terminus BC359_13715 PF10782 Zinc-finger BC359_13720 PF13456 Reverse transcriptase-like BC359_13725 PF13456 Reverse transcriptase-like BC359_13745 PF10752 Protein of unknown function (DUF2533) BC359_13755 PF00350 Dynamin family BC359_13760 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family BC359_13775 PF00860 Permease family BC359_13780 PF00156 Phosphoribosyl transferase domain BC359_13785 PF02074 Carboxypeptidase Taq (M32) metallopeptidase BC359_13790 PF13307 Helicase C-terminal domain BC359_13805 PF02926 THUMP domain BC359_13805 PF01170 Putative RNA methylase family UPF0020 BC359_13810 PF16657 Maltogenic Amylase, C-terminal domain BC359_13810 PF00128 Alpha amylase, catalytic domain BC359_13815 PF00072 Response regulator receiver domain BC359_13815 PF00196 Bacterial regulatory proteins, luxR family BC359_13820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BC359_13820 PF07730 Histidine kinase BC359_13845 PF05103 DivIVA protein BC359_13850 PF06908 YspA SLOG family BC359_13860 PF13482 RNase_H superfamily BC359_13865 PF00271 Helicase conserved C-terminal domain BC359_13865 PF09369 Domain of unknown function (DUF1998) BC359_13865 PF00270 DEAD/DEAH box helicase BC359_13880 PF03190 Protein of unknown function, DUF255 BC359_13895 PF01497 Periplasmic binding protein BC359_13900 PF00005 ABC transporter BC359_13905 PF01032 FecCD transport family BC359_13910 PF01032 FecCD transport family BC359_13945 PF00313 'Cold-shock' DNA-binding domain BC359_13950 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) BC359_13955 PF00474 Sodium:solute symporter family BC359_13970 PF01053 Cys/Met metabolism PLP-dependent enzyme BC359_13975 PF01053 Cys/Met metabolism PLP-dependent enzyme BC359_13980 PF08757 CotH kinase protein BC359_13990 PF14179 YppG-like protein BC359_14000 PF08807 Bacterial domain of unknown function (DUF1798) BC359_14010 PF10720 Protein of unknown function (DUF2515) BC359_14015 PF03838 Recombination protein U BC359_14030 PF00730 HhH-GPD superfamily base excision DNA repair protein BC359_14030 PF10576 Iron-sulfur binding domain of endonuclease III BC359_14030 PF00633 Helix-hairpin-helix motif BC359_14035 PF07261 Replication initiation and membrane attachment BC359_14040 PF00152 tRNA synthetases class II (D, K and N) BC359_14040 PF01336 OB-fold nucleic acid binding domain BC359_14045 PF00155 Aminotransferase class I and II BC359_14055 PF14084 Protein of unknown function (DUF4264) BC359_14065 PF13307 Helicase C-terminal domain BC359_14065 PF04851 Type III restriction enzyme, res subunit BC359_14065 PF00929 Exonuclease BC359_14070 PF02261 Aspartate decarboxylase BC359_14075 PF02569 Pantoate-beta-alanine ligase BC359_14085 PF02237 Biotin protein ligase C terminal domain BC359_14085 PF03099 Biotin/lipoate A/B protein ligase family BC359_14085 PF08279 HTH domain BC359_14090 PF13735 tRNA nucleotidyltransferase domain 2 putative BC359_14090 PF12627 Probable RNA and SrmB- binding site of polymerase A BC359_14090 PF01743 Poly A polymerase head domain BC359_14095 PF13439 Glycosyltransferase Family 4 BC359_14095 PF00534 Glycosyl transferases group 1 BC359_14100 PF02585 GlcNAc-PI de-N-acetylase BC359_14105 PF02142 MGS-like domain BC359_14110 PF01113 Dihydrodipicolinate reductase, N-terminus BC359_14110 PF05173 Dihydrodipicolinate reductase, C-terminus BC359_14115 PF03819 MazG nucleotide pyrophosphohydrolase domain BC359_14120 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BC359_14120 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BC359_14125 PF04298 Putative neutral zinc metallopeptidase BC359_14130 PF09577 Sporulation protein YpjB (SpoYpjB) BC359_14135 PF14504 CAP-associated N-terminal BC359_14135 PF00188 Cysteine-rich secretory protein family BC359_14140 PF00571 CBS domain BC359_14145 PF08868 YugN-like family BC359_14150 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) BC359_14155 PF03626 Prokaryotic Cytochrome C oxidase subunit IV BC359_14160 PF00510 Cytochrome c oxidase subunit III BC359_14165 PF00115 Cytochrome C and Quinol oxidase polypeptide I BC359_14170 PF00034 Cytochrome c BC359_14170 PF00116 Cytochrome C oxidase subunit II, periplasmic domain BC359_14170 PF02790 Cytochrome C oxidase subunit II, transmembrane domain BC359_14180 PF00289 Biotin carboxylase, N-terminal domain BC359_14180 PF00682 HMGL-like BC359_14180 PF02436 Conserved carboxylase domain BC359_14180 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BC359_14180 PF00364 Biotin-requiring enzyme BC359_14180 PF02785 Biotin carboxylase C-terminal domain BC359_14185 PF01098 Cell cycle protein BC359_14190 PF07408 Protein of unknown function (DUF1507) BC359_14200 PF13638 PIN domain BC359_14200 PF02562 PhoH-like protein BC359_14205 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) BC359_14215 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) BC359_14225 PF14036 YlaH-like protein BC359_14235 PF17259 Family of unknown function (DUF5325) BC359_14240 PF00459 Inositol monophosphatase family BC359_14250 PF06335 Protein of unknown function (DUF1054) BC359_14255 PF05256 Uncharacterised protein family (UPF0223) BC359_14260 PF01276 Orn/Lys/Arg decarboxylase, major domain BC359_14260 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain BC359_14270 PF02028 BCCT, betaine/carnitine/choline family transporter BC359_14280 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BC359_14280 PF07992 Pyridine nucleotide-disulphide oxidoreductase BC359_14285 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) BC359_14285 PF02817 e3 binding domain BC359_14285 PF00364 Biotin-requiring enzyme BC359_14290 PF02780 Transketolase, C-terminal domain BC359_14290 PF02779 Transketolase, pyrimidine binding domain BC359_14295 PF00676 Dehydrogenase E1 component BC359_14305 PF01327 Polypeptide deformylase BC359_14320 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain BC359_14320 PF00753 Metallo-beta-lactamase superfamily BC359_14320 PF17770 Ribonuclease J C-terminal domain BC359_14335 PF00005 ABC transporter BC359_14340 PF00072 Response regulator receiver domain BC359_14340 PF00196 Bacterial regulatory proteins, luxR family BC359_14345 PF07730 Histidine kinase BC359_14350 PF02080 TrkA-C domain BC359_14350 PF02254 TrkA-N domain BC359_14355 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BC359_14355 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain BC359_14360 PF10417 C-terminal domain of 1-Cys peroxiredoxin BC359_14360 PF00578 AhpC/TSA family BC359_14365 PF00924 Mechanosensitive ion channel BC359_14370 PF01546 Peptidase family M20/M25/M40 BC359_14370 PF07687 Peptidase dimerisation domain BC359_14375 PF14602 Hexapeptide repeat of succinyl-transferase BC359_14375 PF00132 Bacterial transferase hexapeptide (six repeats) BC359_14375 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal BC359_14380 PF03466 LysR substrate binding domain BC359_14380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BC359_14385 PF08796 Protein of unknown function (DUF1797) BC359_14400 PF10388 EAL-domain associated signalling protein domain BC359_14400 PF00563 EAL domain BC359_14410 PF10518 TAT (twin-arginine translocation) pathway signal sequence BC359_14410 PF00149 Calcineurin-like phosphoesterase BC359_14420 PF13090 Polyphosphate kinase C-terminal domain 2 BC359_14420 PF02503 Polyphosphate kinase middle domain BC359_14420 PF13089 Polyphosphate kinase N-terminal domain BC359_14420 PF17941 Polyphosphate kinase C-terminal domain 1 BC359_14425 PF02541 Ppx/GppA phosphatase family BC359_14430 PF01476 LysM domain BC359_14430 PF03734 L,D-transpeptidase catalytic domain BC359_14440 PF06800 Sugar transport protein BC359_14445 PF14177 YkyB-like protein BC359_14450 PF00072 Response regulator receiver domain BC359_14450 PF01584 CheW-like domain BC359_14465 PF00155 Aminotransferase class I and II BC359_14475 PF13333 Integrase core domain BC359_14475 PF00665 Integrase core domain BC359_14475 PF13276 HTH-like domain BC359_14480 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BC359_14480 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BC359_14485 PF00881 Nitroreductase family BC359_14500 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BC359_14500 PF03466 LysR substrate binding domain BC359_14505 PF01638 HxlR-like helix-turn-helix BC359_14510 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family BC359_14515 PF01380 SIS domain BC359_14520 PF03788 LrgA family BC359_14525 PF04172 LrgB-like family BC359_14540 PF02896 PEP-utilising enzyme, TIM barrel domain BC359_14540 PF05524 PEP-utilising enzyme, N-terminal BC359_14540 PF00391 PEP-utilising enzyme, mobile domain BC359_14545 PF00381 PTS HPr component phosphorylation site BC359_14550 PF02378 Phosphotransferase system, EIIC BC359_14550 PF00367 phosphotransferase system, EIIB BC359_14550 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BC359_14555 PF00874 PRD domain BC359_14555 PF03123 CAT RNA binding domain BC359_14565 PF00885 6,7-dimethyl-8-ribityllumazine synthase BC359_14570 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase BC359_14570 PF00925 GTP cyclohydrolase II BC359_14575 PF00677 Lumazine binding domain BC359_14585 PF00248 Aldo/keto reductase family BC359_14590 PF02219 Methylenetetrahydrofolate reductase BC359_14590 PF02574 Homocysteine S-methyltransferase BC359_14595 PF02607 B12 binding domain BC359_14595 PF02574 Homocysteine S-methyltransferase BC359_14595 PF00809 Pterin binding enzyme BC359_14595 PF02965 Vitamin B12 dependent methionine synthase, activation domain BC359_14595 PF02310 B12 binding domain BC359_14600 PF02554 Carbon starvation protein CstA BC359_14620 PF00860 Permease family BC359_14630 PF07997 Protein of unknown function (DUF1694) BC359_14635 PF07486 Cell Wall Hydrolase BC359_14650 PF01734 Patatin-like phospholipase BC359_14650 PF00027 Cyclic nucleotide-binding domain BC359_14655 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) BC359_14660 PF13460 NAD(P)H-binding BC359_14665 PF14489 QueF-like protein BC359_14670 PF04055 Radical SAM superfamily BC359_14675 PF01242 6-pyruvoyl tetrahydropterin synthase BC359_14680 PF06508 Queuosine biosynthesis protein QueC BC359_14685 PF03845 Spore germination protein BC359_14690 PF03845 Spore germination protein BC359_14705 PF05504 Spore germination B3/ GerAC like, C-terminal BC359_14710 PF03323 Bacillus/Clostridium GerA spore germination protein BC359_14715 PF00106 short chain dehydrogenase BC359_14735 PF17871 AAA lid domain BC359_14735 PF10431 C-terminal, D2-small domain, of ClpB protein BC359_14735 PF00004 ATPase family associated with various cellular activities (AAA) BC359_14735 PF07724 AAA domain (Cdc48 subfamily) BC359_14750 PF01047 MarR family BC359_14760 PF02535 ZIP Zinc transporter BC359_14770 PF07992 Pyridine nucleotide-disulphide oxidoreductase BC359_14770 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain BC359_14775 PF02653 Branched-chain amino acid transport system / permease component BC359_14780 PF00005 ABC transporter BC359_14790 PF03079 ARD/ARD' family BC359_14805 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain BC359_14805 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain BC359_14810 PF00155 Aminotransferase class I and II BC359_14815 PF00795 Carbon-nitrogen hydrolase BC359_14820 PF01636 Phosphotransferase enzyme family BC359_14825 PF01008 Initiation factor 2 subunit family BC359_14835 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain BC359_14835 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain BC359_14845 PF02540 NAD synthase BC359_14850 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain BC359_14850 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family BC359_14850 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain BC359_14855 PF04055 Radical SAM superfamily BC359_14855 PF02310 B12 binding domain BC359_14860 PF02386 Cation transport protein BC359_14865 PF00561 alpha/beta hydrolase fold BC359_14890 PF00269 Small, acid-soluble spore proteins, alpha/beta type BC359_14895 PF03741 Integral membrane protein TerC family BC359_14900 PF00072 Response regulator receiver domain BC359_14900 PF00486 Transcriptional regulatory protein, C terminal BC359_14910 PF04397 LytTr DNA-binding domain BC359_14910 PF00072 Response regulator receiver domain BC359_14915 PF01609 Transposase DDE domain BC359_14920 PF00245 Alkaline phosphatase BC359_14925 PF03323 Bacillus/Clostridium GerA spore germination protein BC359_14935 PF03845 Spore germination protein BC359_14940 PF01641 SelR domain BC359_14940 PF01625 Peptide methionine sulfoxide reductase BC359_14945 PF07690 Major Facilitator Superfamily BC359_14950 PF01047 MarR family BC359_14970 PF00860 Permease family BC359_14985 PF07690 Major Facilitator Superfamily BC359_15015 PF10502 Signal peptidase, peptidase S26 BC359_15020 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily BC359_15030 PF00571 CBS domain BC359_15030 PF01595 Cyclin M transmembrane N-terminal domain BC359_15030 PF03471 Transporter associated domain BC359_15035 PF02872 5'-nucleotidase, C-terminal domain BC359_15035 PF00746 LPXTG cell wall anchor motif BC359_15035 PF00149 Calcineurin-like phosphoesterase BC359_15035 PF00565 Staphylococcal nuclease homologue BC359_15040 PF00005 ABC transporter BC359_15040 PF00664 ABC transporter transmembrane region BC359_15045 PF00664 ABC transporter transmembrane region BC359_15045 PF00005 ABC transporter BC359_15050 PF02322 Cytochrome bd terminal oxidase subunit II BC359_15055 PF01654 Cytochrome bd terminal oxidase subunit I BC359_15065 PF08240 Alcohol dehydrogenase GroES-like domain BC359_15065 PF13823 Alcohol dehydrogenase GroES-associated BC359_15065 PF00107 Zinc-binding dehydrogenase BC359_15085 PF00005 ABC transporter BC359_15110 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 BC359_15110 PF02378 Phosphotransferase system, EIIC BC359_15110 PF00367 phosphotransferase system, EIIB BC359_15115 PF01979 Amidohydrolase family BC359_15120 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase BC359_15160 PF05116 Sucrose-6F-phosphate phosphohydrolase BC359_15165 PF00356 Bacterial regulatory proteins, lacI family BC359_15170 PF00375 Sodium:dicarboxylate symporter family BC359_15180 PF12650 Domain of unknown function (DUF3784) BC359_15210 PF13378 Enolase C-terminal domain-like BC359_15210 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain BC359_15220 PF01418 Helix-turn-helix domain, rpiR family BC359_15220 PF01380 SIS domain BC359_15225 PF07687 Peptidase dimerisation domain BC359_15225 PF01546 Peptidase family M20/M25/M40 BC359_15245 PF03741 Integral membrane protein TerC family BC359_15275 PF18593 CdiI immunity protein BC359_15290 PF00011 Hsp20/alpha crystallin family BC359_15330 PF14410 HNH/ENDO VII superfamily nuclease with conserved GHE residues BC359_15330 PF04740 LXG domain of WXG superfamily BC359_15330 PF14449 Pre-toxin TG BC359_15345 PF02082 Transcriptional regulator BC359_15350 PF05368 NmrA-like family BC359_15360 PF07875 Coat F domain BC359_15365 PF13823 Alcohol dehydrogenase GroES-associated BC359_15365 PF00107 Zinc-binding dehydrogenase BC359_15365 PF08240 Alcohol dehydrogenase GroES-like domain BC359_15375 PF07875 Coat F domain BC359_15410 PF03816 Cell envelope-related transcriptional attenuator domain BC359_15415 PF13614 AAA domain BC359_15420 PF13807 G-rich domain on putative tyrosine kinase BC359_15420 PF02706 Chain length determinant protein BC359_15425 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BC359_15425 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BC359_15425 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BC359_15425 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BC359_15430 PF01238 Phosphomannose isomerase type I BC359_15440 PF00483 Nucleotidyl transferase BC359_15440 PF01050 Mannose-6-phosphate isomerase BC359_15445 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain BC359_15445 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain BC359_15445 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain BC359_15455 PF13439 Glycosyltransferase Family 4 BC359_15455 PF00534 Glycosyl transferases group 1 BC359_15470 PF13439 Glycosyltransferase Family 4 BC359_15475 PF00534 Glycosyl transferases group 1 BC359_15475 PF13439 Glycosyltransferase Family 4 BC359_15480 PF02397 Bacterial sugar transferase BC359_15485 PF00483 Nucleotidyl transferase BC359_15515 PF16363 GDP-mannose 4,6 dehydratase BC359_15550 PF00440 Bacterial regulatory proteins, tetR family BC359_15560 PF00672 HAMP domain BC359_15560 PF12729 Four helix bundle sensory module for signal transduction BC359_15560 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BC359_15565 PF00877 NlpC/P60 family BC359_15575 PF13426 PAS domain BC359_15575 PF08448 PAS fold BC359_15575 PF08447 PAS fold BC359_15575 PF00990 Diguanylate cyclase, GGDEF domain BC359_15575 PF00563 EAL domain BC359_15575 PF05231 MASE1 BC359_15585 PF01915 Glycosyl hydrolase family 3 C-terminal domain BC359_15585 PF00933 Glycosyl hydrolase family 3 N terminal domain BC359_15590 PF13240 zinc-ribbon domain BC359_15600 PF13240 zinc-ribbon domain BC359_15615 PF06013 Proteins of 100 residues with WXG BC359_15620 PF06628 Catalase-related immune-responsive BC359_15620 PF00199 Catalase BC359_15630 PF00990 Diguanylate cyclase, GGDEF domain BC359_15630 PF05230 MASE2 domain BC359_15640 PF12327 FtsZ family, C-terminal domain BC359_15640 PF00091 Tubulin/FtsZ family, GTPase domain BC359_15645 PF13188 PAS domain BC359_15645 PF03707 Bacterial signalling protein N terminal repeat BC359_15645 PF00563 EAL domain BC359_15645 PF00990 Diguanylate cyclase, GGDEF domain BC359_15655 PF00005 ABC transporter BC359_15660 PF00392 Bacterial regulatory proteins, gntR family BC359_15665 PF05547 Immune inhibitor A peptidase M6 BC359_15675 PF04962 KduI/IolB family BC359_15680 PF01261 Xylose isomerase-like TIM barrel BC359_15685 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain BC359_15685 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain BC359_15685 PF00205 Thiamine pyrophosphate enzyme, central domain BC359_15690 PF00171 Aldehyde dehydrogenase family BC359_15695 PF00294 pfkB family carbohydrate kinase BC359_15700 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BC359_15700 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BC359_15705 PF07690 Major Facilitator Superfamily BC359_15710 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BC359_15710 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BC359_15725 PF02653 Branched-chain amino acid transport system / permease component BC359_15730 PF00005 ABC transporter BC359_15745 PF01425 Amidase BC359_15755 PF03734 L,D-transpeptidase catalytic domain BC359_15770 PF07992 Pyridine nucleotide-disulphide oxidoreductase BC359_15785 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) BC359_15790 PF13091 PLD-like domain BC359_15790 PF13396 Phospholipase_D-nuclease N-terminal BC359_15800 PF01594 AI-2E family transporter BC359_15805 PF13419 Haloacid dehalogenase-like hydrolase BC359_15835 PF09587 Bacterial capsule synthesis protein PGA_cap BC359_15840 PF14102 Capsule biosynthesis CapC BC359_15845 PF08245 Mur ligase middle domain BC359_15860 PF00893 Small Multidrug Resistance protein BC359_15865 PF00893 Small Multidrug Resistance protein BC359_15870 PF02416 mttA/Hcf106 family BC359_15890 PF01408 Oxidoreductase family, NAD-binding Rossmann fold BC359_15890 PF02894 Oxidoreductase family, C-terminal alpha/beta domain BC359_15910 PF00313 'Cold-shock' DNA-binding domain BC359_15915 PF07969 Amidohydrolase family BC359_15935 PF03006 Haemolysin-III related BC359_15945 PF03773 Predicted permease BC359_15950 PF01566 Natural resistance-associated macrophage protein BC359_15955 PF03746 LamB/YcsF family BC359_15960 PF02626 Carboxyltransferase domain, subdomain A and B BC359_15965 PF02682 Carboxyltransferase domain, subdomain C and D BC359_15970 PF00392 Bacterial regulatory proteins, gntR family BC359_15970 PF07702 UTRA domain BC359_15975 PF16657 Maltogenic Amylase, C-terminal domain BC359_15975 PF00128 Alpha amylase, catalytic domain BC359_15985 PF00892 EamA-like transporter family BC359_15990 PF13113 Protein of unknown function (DUF3970) BC359_15995 PF01202 Shikimate kinase BC359_16000 PF00860 Permease family BC359_16005 PF01979 Amidohydrolase family BC359_16030 PF13419 Haloacid dehalogenase-like hydrolase BC359_16035 PF00300 Histidine phosphatase superfamily (branch 1) BC359_16045 PF00258 Flavodoxin BC359_16060 PF09350 Domain of unknown function (DUF1992) BC359_16065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BC359_16065 PF00672 HAMP domain BC359_16065 PF00512 His Kinase A (phospho-acceptor) domain BC359_16065 PF13426 PAS domain BC359_16075 PF00072 Response regulator receiver domain BC359_16075 PF00990 Diguanylate cyclase, GGDEF domain BC359_16085 PF01261 Xylose isomerase-like TIM barrel BC359_16090 PF00528 Binding-protein-dependent transport system inner membrane component BC359_16095 PF00528 Binding-protein-dependent transport system inner membrane component BC359_16100 PF13416 Bacterial extracellular solute-binding protein BC359_16105 PF06725 3D domain BC359_16105 PF07501 G5 domain BC359_16105 PF03990 G5-linked-Ubiquitin-like domain BC359_16110 PF13407 Periplasmic binding protein domain BC359_16115 PF02653 Branched-chain amino acid transport system / permease component BC359_16120 PF00005 ABC transporter BC359_16125 PF05025 RbsD / FucU transport protein family BC359_16130 PF00294 pfkB family carbohydrate kinase BC359_16135 PF00356 Bacterial regulatory proteins, lacI family BC359_16140 PF00248 Aldo/keto reductase family BC359_16145 PF09339 IclR helix-turn-helix domain BC359_16145 PF01614 Bacterial transcriptional regulator BC359_16165 PF04341 Protein of unknown function, DUF485 BC359_16170 PF00474 Sodium:solute symporter family BC359_16185 PF01638 HxlR-like helix-turn-helix BC359_16195 PF09084 NMT1/THI5 like BC359_16200 PF00528 Binding-protein-dependent transport system inner membrane component BC359_16205 PF00005 ABC transporter BC359_16210 PF03070 TENA/THI-4/PQQC family BC359_16215 PF01546 Peptidase family M20/M25/M40 BC359_16215 PF07687 Peptidase dimerisation domain BC359_16220 PF13419 Haloacid dehalogenase-like hydrolase BC359_16230 PF08241 Methyltransferase domain BC359_16235 PF05145 Transition state regulatory protein AbrB BC359_16240 PF03466 LysR substrate binding domain BC359_16240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BC359_16245 PF03401 Tripartite tricarboxylate transporter family receptor BC359_16250 PF12431 Transcriptional regulator BC359_16250 PF08279 HTH domain BC359_16250 PF00072 Response regulator receiver domain BC359_16255 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain BC359_16255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BC359_16260 PF03600 Citrate transporter BC359_16275 PF04703 FaeA-like protein BC359_16275 PF00072 Response regulator receiver domain BC359_16280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BC359_16280 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain BC359_16280 PF17203 Single cache domain 3 BC359_16285 PF03480 Bacterial extracellular solute-binding protein, family 7 BC359_16290 PF00375 Sodium:dicarboxylate symporter family BC359_16305 PF07486 Cell Wall Hydrolase BC359_16320 PF12704 MacB-like periplasmic core domain BC359_16320 PF02687 FtsX-like permease family BC359_16325 PF00005 ABC transporter BC359_16330 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion BC359_16340 PF00355 Rieske [2Fe-2S] domain BC359_16345 PF03061 Thioesterase superfamily BC359_16360 PF07690 Major Facilitator Superfamily BC359_16365 PF01638 HxlR-like helix-turn-helix BC359_16370 PF09962 Uncharacterized conserved protein (DUF2196) BC359_16375 PF03009 Glycerophosphoryl diester phosphodiesterase family BC359_16380 PF02652 L-lactate permease BC359_16385 PF01557 Fumarylacetoacetate (FAA) hydrolase family BC359_16390 PF01274 Malate synthase BC359_16395 PF01565 FAD binding domain BC359_16395 PF02913 FAD linked oxidases, C-terminal domain BC359_16400 PF02754 Cysteine-rich domain BC359_16400 PF13183 4Fe-4S dicluster domain BC359_16410 PF00392 Bacterial regulatory proteins, gntR family BC359_16410 PF07729 FCD domain BC359_16415 PF01053 Cys/Met metabolism PLP-dependent enzyme BC359_16420 PF04542 Sigma-70 region 2 BC359_16420 PF08281 Sigma-70, region 4 BC359_16435 PF13536 Putative multidrug resistance efflux transporter BC359_16440 PF07729 FCD domain BC359_16440 PF00392 Bacterial regulatory proteins, gntR family BC359_16445 PF01740 STAS domain BC359_16445 PF13426 PAS domain BC359_16455 PF01226 Formate/nitrite transporter BC359_16460 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases BC359_16465 PF00355 Rieske [2Fe-2S] domain BC359_16470 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain BC359_16470 PF04324 BFD-like [2Fe-2S] binding domain BC359_16470 PF18267 Rubredoxin NAD+ reductase C-terminal domain BC359_16470 PF07992 Pyridine nucleotide-disulphide oxidoreductase BC359_16470 PF01077 Nitrite and sulphite reductase 4Fe-4S domain BC359_16475 PF01297 Zinc-uptake complex component A periplasmic BC359_16480 PF00950 ABC 3 transport family BC359_16485 PF00005 ABC transporter BC359_16500 PF01695 IstB-like ATP binding protein BC359_16510 PF01527 Transposase BC359_16515 PF13333 Integrase core domain BC359_16515 PF13276 HTH-like domain BC359_16515 PF00665 Integrase core domain BC359_16525 PF00005 ABC transporter BC359_16530 PF07690 Major Facilitator Superfamily BC359_16540 PF14659 Phage integrase, N-terminal SAM-like domain BC359_16540 PF00589 Phage integrase family BC359_16545 PF14659 Phage integrase, N-terminal SAM-like domain BC359_16545 PF00589 Phage integrase family BC359_16565 PF02447 GntP family permease BC359_16570 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BC359_16570 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BC359_16575 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain BC359_16575 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BC359_16580 PF01380 SIS domain BC359_16580 PF01418 Helix-turn-helix domain, rpiR family BC359_16590 PF04608 Phosphatidylglycerophosphatase A BC359_16600 PF00756 Putative esterase BC359_16610 PF13673 Acetyltransferase (GNAT) domain BC359_16615 PF03323 Bacillus/Clostridium GerA spore germination protein BC359_16620 PF03323 Bacillus/Clostridium GerA spore germination protein BC359_16630 PF04239 Protein of unknown function (DUF421) BC359_16640 PF13361 UvrD-like helicase C-terminal domain BC359_16640 PF00580 UvrD/REP helicase N-terminal domain BC359_16645 PF14069 Stage VI sporulation protein F BC359_16680 PF07098 Protein of unknown function (DUF1360) BC359_16695 PF00999 Sodium/hydrogen exchanger family BC359_16695 PF02080 TrkA-C domain BC359_16695 PF02254 TrkA-N domain BC359_16700 PF01769 Divalent cation transporter BC359_16700 PF03448 MgtE intracellular N domain BC359_16700 PF00571 CBS domain BC359_16705 PF00149 Calcineurin-like phosphoesterase BC359_16710 PF00849 RNA pseudouridylate synthase BC359_16715 PF01513 ATP-NAD kinase BC359_16720 PF04607 Region found in RelA / SpoT proteins BC359_16730 PF01928 CYTH domain BC359_16735 PF01464 Transglycosylase SLT domain BC359_16740 PF01152 Bacterial-like globin BC359_16750 PF08439 Oligopeptidase F BC359_16750 PF01432 Peptidase family M3 BC359_16760 PF13396 Phospholipase_D-nuclease N-terminal BC359_16760 PF13091 PLD-like domain BC359_16765 PF05389 Negative regulator of genetic competence (MecA) BC359_16770 PF03741 Integral membrane protein TerC family BC359_16775 PF03960 ArsC family BC359_16785 PF00873 AcrB/AcrD/AcrF family BC359_16790 PF13508 Acetyltransferase (GNAT) domain BC359_16795 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BC359_16795 PF00005 ABC transporter BC359_16800 PF08352 Oligopeptide/dipeptide transporter, C-terminal region BC359_16800 PF00005 ABC transporter BC359_16805 PF00528 Binding-protein-dependent transport system inner membrane component BC359_16805 PF12911 N-terminal TM domain of oligopeptide transport permease C BC359_16810 PF00528 Binding-protein-dependent transport system inner membrane component BC359_16815 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle BC359_16820 PF00579 tRNA synthetases class I (W and Y) BC359_16825 PF12227 Protein of unknown function (DUF3603) BC359_16830 PF10026 Predicted Zn-dependent protease (DUF2268) BC359_16835 PF00109 Beta-ketoacyl synthase, N-terminal domain BC359_16835 PF02801 Beta-ketoacyl synthase, C-terminal domain BC359_16840 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal BC359_16840 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III BC359_16850 PF10815 ComZ BC359_16870 PF02449 Beta-galactosidase BC359_16870 PF08533 Beta-galactosidase C-terminal domain BC359_16870 PF08532 Beta-galactosidase trimerisation domain BC359_16875 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain BC359_16875 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain BC359_16880 PF16363 GDP-mannose 4,6 dehydratase BC359_16885 PF10509 Galactokinase galactose-binding signature BC359_16885 PF08544 GHMP kinases C terminal BC359_16885 PF00288 GHMP kinases N terminal domain BC359_16890 PF12833 Helix-turn-helix domain BC359_16910 PF02861 Clp amino terminal domain, pathogenicity island component BC359_16910 PF00004 ATPase family associated with various cellular activities (AAA) BC359_16910 PF17871 AAA lid domain BC359_16910 PF10431 C-terminal, D2-small domain, of ClpB protein BC359_16910 PF07724 AAA domain (Cdc48 subfamily) BC359_16915 PF14168 YjzC-like protein BC359_16920 PF02673 Bacitracin resistance protein BacA BC359_16925 PF13460 NAD(P)H-binding BC359_16930 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain BC359_16930 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain BC359_16935 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain BC359_16935 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain BC359_16940 PF00117 Glutamine amidotransferase class-I BC359_16940 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain BC359_16945 PF00202 Aminotransferase class-III BC359_16950 PF00696 Amino acid kinase family BC359_16955 PF01960 ArgJ family BC359_16960 PF01118 Semialdehyde dehydrogenase, NAD binding domain BC359_16960 PF02774 Semialdehyde dehydrogenase, dimerisation domain BC359_16965 PF01883 Iron-sulfur cluster assembly protein BC359_16975 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BC359_16975 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BC359_16980 PF02645 Uncharacterised protein, DegV family COG1307 BC359_16985 PF13509 S1 domain BC359_16985 PF17783 CvfB-like winged helix domain BC359_16990 PF04461 Protein of unknown function (DUF520) BC359_17000 PF02954 Bacterial regulatory protein, Fis family BC359_17000 PF00158 Sigma-54 interaction domain BC359_17000 PF13426 PAS domain BC359_17005 PF01546 Peptidase family M20/M25/M40 BC359_17010 PF00202 Aminotransferase class-III BC359_17015 PF00171 Aldehyde dehydrogenase family BC359_17020 PF00356 Bacterial regulatory proteins, lacI family BC359_17020 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family BC359_17025 PF00128 Alpha amylase, catalytic domain BC359_17025 PF09087 Cyclomaltodextrinase, N-terminal BC359_17025 PF10438 Cyclo-malto-dextrinase C-terminal domain BC359_17030 PF00909 Ammonium Transporter Family BC359_17035 PF00543 Nitrogen regulatory protein P-II BC359_17045 PF01593 Flavin containing amine oxidoreductase BC359_17055 PF13537 Glutamine amidotransferase domain BC359_17055 PF00733 Asparagine synthase BC359_17060 PF10949 Protein of unknown function (DUF2777) BC359_17065 PF07457 Protein of unknown function (DUF1516) BC359_17070 PF10676 Spore germination protein gerPA/gerPF BC359_17075 PF10803 Spore germination GerPB BC359_17080 PF10737 Spore germination protein GerPC BC359_17095 PF10676 Spore germination protein gerPA/gerPF BC359_17105 PF13476 AAA domain BC359_17110 PF12320 Type 5 capsule protein repressor C-terminal domain BC359_17110 PF00149 Calcineurin-like phosphoesterase BC359_17115 PF00580 UvrD/REP helicase N-terminal domain BC359_17115 PF13361 UvrD-like helicase C-terminal domain BC359_17115 PF12705 PD-(D/E)XK nuclease superfamily BC359_17130 PF09335 SNARE associated Golgi protein BC359_17200 PF00463 Isocitrate lyase family BC359_17205 PF01435 Peptidase family M48 BC359_17205 PF16491 CAAX prenyl protease N-terminal, five membrane helices BC359_17210 PF00378 Enoyl-CoA hydratase/isomerase BC359_17215 PF00501 AMP-binding enzyme BC359_17215 PF13193 AMP-binding enzyme C-terminal domain BC359_17220 PF10437 Bacterial lipoate protein ligase C-terminus BC359_17220 PF03099 Biotin/lipoate A/B protein ligase family BC359_17225 PF12706 Beta-lactamase superfamily domain BC359_17230 PF14149 YhfH-like protein BC359_17235 PF01773 Na+ dependent nucleoside transporter N-terminus BC359_17235 PF07670 Nucleoside recognition BC359_17235 PF07662 Na+ dependent nucleoside transporter C-terminus BC359_17240 PF12833 Helix-turn-helix domain BC359_17240 PF17853 GGDEF-like domain BC359_17245 PF06580 Histidine kinase BC359_17245 PF00672 HAMP domain BC359_17245 PF02743 Cache domain BC359_17245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BC359_17260 PF00440 Bacterial regulatory proteins, tetR family BC359_17260 PF17932 Tetracyclin repressor-like, C-terminal domain BC359_17275 PF01208 Uroporphyrinogen decarboxylase (URO-D) BC359_17280 PF00905 Penicillin binding protein transpeptidase domain BC359_17280 PF00912 Transglycosylase BC359_17285 PF03992 Antibiotic biosynthesis monooxygenase BC359_17325 PF01609 Transposase DDE domain BC359_17340 PF01510 N-acetylmuramoyl-L-alanine amidase BC359_17340 PF01476 LysM domain BC359_17340 PF01471 Putative peptidoglycan binding domain BC359_17415 PF00574 Clp protease BC359_17425 PF01555 DNA methylase BC359_17480 PF01609 Transposase DDE domain BC359_17505 PF00772 DnaB-like helicase N terminal domain BC359_17505 PF03796 DnaB-like helicase C terminal domain BC359_17540 PF01726 LexA DNA binding domain BC359_17540 PF00717 Peptidase S24-like BC359_17545 PF00239 Resolvase, N terminal domain BC359_17545 PF02796 Helix-turn-helix domain of resolvase BC359_17555 PF01546 Peptidase family M20/M25/M40 BC359_17555 PF07687 Peptidase dimerisation domain BC359_17565 PF05975 Bacterial ABC transporter protein EcsB BC359_17570 PF00005 ABC transporter BC359_17575 PF01230 HIT domain BC359_17580 PF13673 Acetyltransferase (GNAT) domain BC359_17585 PF01609 Transposase DDE domain BC359_17590 PF00266 Aminotransferase class-V BC359_17595 PF17099 Tryptophan transporter TrpP BC359_17605 PF01047 MarR family BC359_17620 PF05698 Bacterial trigger factor protein (TF) C-terminus BC359_17625 PF14147 Sporulation protein YhaL BC359_17630 PF01966 HD domain BC359_17640 PF00005 ABC transporter BC359_17640 PF13732 Domain of unknown function (DUF4162) BC359_17650 PF00216 Bacterial DNA-binding protein BC359_17655 PF00378 Enoyl-CoA hydratase/isomerase BC359_17660 PF13193 AMP-binding enzyme C-terminal domain BC359_17660 PF00501 AMP-binding enzyme BC359_17665 PF04055 Radical SAM superfamily BC359_17680 PF00005 ABC transporter BC359_17695 PF06133 Control of competence regulator ComK, YlbF/YmcA BC359_17705 PF14398 YheC/D like ATP-grasp BC359_17710 PF14398 YheC/D like ATP-grasp BC359_17715 PF14398 YheC/D like ATP-grasp BC359_17720 PF14398 YheC/D like ATP-grasp BC359_17730 PF13556 PucR C-terminal helix-turn-helix domain BC359_17735 PF17912 MalK OB fold domain BC359_17735 PF03459 TOBE domain BC359_17735 PF00005 ABC transporter BC359_17745 PF00269 Small, acid-soluble spore proteins, alpha/beta type BC359_17750 PF01595 Cyclin M transmembrane N-terminal domain BC359_17750 PF03471 Transporter associated domain BC359_17750 PF00571 CBS domain BC359_17755 PF13460 NAD(P)H-binding BC359_17760 PF08543 Phosphomethylpyrimidine kinase BC359_17765 PF00899 ThiF family BC359_17770 PF05690 Thiazole biosynthesis protein ThiG BC359_17780 PF01266 FAD dependent oxidoreductase BC359_17795 PF00497 Bacterial extracellular solute-binding proteins, family 3 BC359_17800 PF00528 Binding-protein-dependent transport system inner membrane component BC359_17805 PF00005 ABC transporter BC359_17810 PF00107 Zinc-binding dehydrogenase BC359_17810 PF08240 Alcohol dehydrogenase GroES-like domain BC359_17820 PF04293 SpoVR like protein BC359_17825 PF14148 YhdB-like protein BC359_17830 PF02632 BioY family BC359_17835 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BC359_17835 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BC359_17835 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BC359_17835 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BC359_17840 PF16901 C-terminal domain of alpha-glycerophosphate oxidase BC359_17840 PF01266 FAD dependent oxidoreductase BC359_17845 PF02782 FGGY family of carbohydrate kinases, C-terminal domain BC359_17845 PF00370 FGGY family of carbohydrate kinases, N-terminal domain BC359_17850 PF00230 Major intrinsic protein BC359_17855 PF04309 Glycerol-3-phosphate responsive antiterminator BC359_17890 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BC359_17890 PF00672 HAMP domain BC359_17890 PF02743 Cache domain BC359_17895 PF01545 Cation efflux family BC359_17895 PF16916 Dimerisation domain of Zinc Transporter BC359_17900 PF03009 Glycerophosphoryl diester phosphodiesterase family BC359_17905 PF13416 Bacterial extracellular solute-binding protein BC359_17910 PF00528 Binding-protein-dependent transport system inner membrane component BC359_17915 PF00528 Binding-protein-dependent transport system inner membrane component BC359_17920 PF08402 TOBE domain BC359_17920 PF00005 ABC transporter BC359_17925 PF04309 Glycerol-3-phosphate responsive antiterminator BC359_17930 PF06968 Biotin and Thiamin Synthesis associated domain BC359_17930 PF04055 Radical SAM superfamily BC359_17935 PF00989 PAS fold BC359_17935 PF00158 Sigma-54 interaction domain BC359_17935 PF02954 Bacterial regulatory protein, Fis family BC359_17945 PF12787 EcsC protein family BC359_17950 PF09335 SNARE associated Golgi protein BC359_17960 PF00375 Sodium:dicarboxylate symporter family BC359_17965 PF02673 Bacitracin resistance protein BacA BC359_17970 PF05525 Branched-chain amino acid transport protein BC359_17980 PF13667 ThiC-associated domain BC359_17980 PF01964 Radical SAM ThiC family BC359_17995 PF03323 Bacillus/Clostridium GerA spore germination protein BC359_18000 PF02666 Phosphatidylserine decarboxylase BC359_18010 PF01047 MarR family BC359_18015 PF04285 Protein of unknown function (DUF444) BC359_18020 PF08298 PrkA AAA domain BC359_18020 PF06798 PrkA serine protein kinase C-terminal domain BC359_18025 PF00588 SpoU rRNA Methylase family BC359_18030 PF12671 Putative amidase domain BC359_18035 PF08331 Domain of unknown function (DUF1730) BC359_18050 PF06874 Firmicute fructose-1,6-bisphosphatase BC359_18070 PF01527 Transposase BC359_18075 PF13333 Integrase core domain BC359_18075 PF00665 Integrase core domain BC359_18075 PF13276 HTH-like domain BC359_18145 PF00589 Phage integrase family BC359_18145 PF02899 Phage integrase, N-terminal SAM-like domain BC359_18320 PF18576 Helix-turn-helix domain BC359_18320 PF14540 Nucleotidyltransferase-like BC359_18325 PF11023 Zinc-ribbon containing domain BC359_18330 PF01475 Ferric uptake regulator family BC359_18335 PF00578 AhpC/TSA family BC359_18340 PF07885 Ion channel BC359_18360 PF00202 Aminotransferase class-III BC359_18365 PF06081 Aromatic acid exporter family member 1 BC359_18370 PF00664 ABC transporter transmembrane region BC359_18370 PF00005 ABC transporter BC359_18375 PF04167 Protein of unknown function (DUF402) BC359_18380 PF14182 YgaB-like protein BC359_18400 PF14815 NUDIX domain BC359_18400 PF00730 HhH-GPD superfamily base excision DNA repair protein BC359_18405 PF04307 LexA-binding, inner membrane-associated putative hydrolase BC359_18415 PF08176 Small acid-soluble spore protein K family BC359_18420 PF08838 Protein of unknown function (DUF1811) BC359_18425 PF00106 short chain dehydrogenase BC359_18430 PF02631 RecX family BC359_18435 PF00232 Glycosyl hydrolase family 1 BC359_18445 PF00356 Bacterial regulatory proteins, lacI family BC359_18450 PF01370 NAD dependent epimerase/dehydratase family BC359_18450 PF08338 Domain of unknown function (DUF1731) BC359_18455 PF01979 Amidohydrolase family BC359_18470 PF02028 BCCT, betaine/carnitine/choline family transporter BC359_18480 PF02743 Cache domain BC359_18480 PF00672 HAMP domain BC359_18480 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain BC359_18485 PF00881 Nitroreductase family BC359_18490 PF10787 Uncharacterised protein from bacillus cereus group BC359_18495 PF01810 LysE type translocator BC359_18500 PF00881 Nitroreductase family BC359_18510 PF00072 Response regulator receiver domain BC359_18510 PF00486 Transcriptional regulatory protein, C terminal BC359_18515 PF00989 PAS fold BC359_18515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BC359_18515 PF18698 Histidine kinase sensor domain BC359_18515 PF00672 HAMP domain BC359_18515 PF00512 His Kinase A (phospho-acceptor) domain BC359_18520 PF02687 FtsX-like permease family BC359_18525 PF00005 ABC transporter BC359_18530 PF00324 Amino acid permease BC359_18545 PF01609 Transposase DDE domain BC359_18550 PF00440 Bacterial regulatory proteins, tetR family BC359_18565 PF00005 ABC transporter BC359_18570 PF00528 Binding-protein-dependent transport system inner membrane component BC359_18575 PF00497 Bacterial extracellular solute-binding proteins, family 3 BC359_18580 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 BC359_18580 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) BC359_18605 PF01609 Transposase DDE domain BC359_18630 PF00005 ABC transporter BC359_18645 PF00072 Response regulator receiver domain BC359_18645 PF04397 LytTr DNA-binding domain BC359_18650 PF10502 Signal peptidase, peptidase S26 BC359_18660 PF03972 MmgE/PrpD family BC359_18665 PF00285 Citrate synthase, C-terminal domain BC359_18680 PF00293 NUDIX domain BC359_18725 PF00589 Phage integrase family BC359_18725 PF13495 Phage integrase, N-terminal SAM-like domain BC359_18740 PF01609 Transposase DDE domain BC359_18750 PF13614 AAA domain BC359_18760 PF07883 Cupin domain BC359_18765 PF01609 Transposase DDE domain BC359_18770 PF02447 GntP family permease BC359_18775 PF01116 Fructose-bisphosphate aldolase class-II BC359_18785 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase BC359_18785 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BC359_18790 PF07729 FCD domain BC359_18790 PF00392 Bacterial regulatory proteins, gntR family BC359_18795 PF00004 ATPase family associated with various cellular activities (AAA) BC359_18795 PF01434 Peptidase family M41 BC359_18795 PF17862 AAA+ lid domain BC359_18805 PF13610 DDE domain BC359_18810 PF01276 Orn/Lys/Arg decarboxylase, major domain BC359_18810 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain BC359_18815 PF10787 Uncharacterised protein from bacillus cereus group BC359_18820 PF00392 Bacterial regulatory proteins, gntR family BC359_18820 PF00155 Aminotransferase class I and II BC359_18825 PF00795 Carbon-nitrogen hydrolase BC359_18830 PF00367 phosphotransferase system, EIIB BC359_18830 PF02378 Phosphotransferase system, EIIC BC359_18840 PF00701 Dihydrodipicolinate synthetase family BC359_18850 PF13610 DDE domain BC359_18865 PF01207 Dihydrouridine synthase (Dus) BC359_18910 PF03591 AzlC protein BC359_18925 PF01588 Putative tRNA binding domain BC359_18930 PF00892 EamA-like transporter family BC359_18935 PF12833 Helix-turn-helix domain BC359_18935 PF07883 Cupin domain BC359_18940 PF02595 Glycerate kinase family BC359_18950 PF05651 Putative sugar diacid recognition BC359_18950 PF17853 GGDEF-like domain BC359_18950 PF13556 PucR C-terminal helix-turn-helix domain BC359_18955 PF03466 LysR substrate binding domain BC359_18955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BC359_18960 PF07690 Major Facilitator Superfamily BC359_18970 PF03471 Transporter associated domain BC359_18970 PF01595 Cyclin M transmembrane N-terminal domain BC359_18970 PF00571 CBS domain BC359_18985 PF00817 impB/mucB/samB family BC359_18985 PF11799 impB/mucB/samB family C-terminal domain BC359_18985 PF11798 IMS family HHH motif BC359_18995 PF07690 Major Facilitator Superfamily BC359_18995 PF07690 Major Facilitator Superfamily BC359_19005 PF01938 TRAM domain BC359_19005 PF05958 tRNA (Uracil-5-)-methyltransferase BC359_19010 PF01522 Polysaccharide deacetylase BC359_19015 PF05683 Fumarase C-terminus BC359_19015 PF05681 Fumarate hydratase (Fumerase) BC359_19020 PF00293 NUDIX domain BC359_19030 PF04055 Radical SAM superfamily BC359_19030 PF08756 YfkB-like domain BC359_19035 PF14167 YfkD-like protein BC359_19040 PF01699 Sodium/calcium exchanger protein BC359_19045 PF16242 Pyridoxamine 5'-phosphate oxidase like BC359_19050 PF00128 Alpha amylase, catalytic domain BC359_19050 PF09154 Domain of unknown function (DUF1939) BC359_19055 PF01263 Aldose 1-epimerase BC359_19090 PF07690 Major Facilitator Superfamily BC359_19095 PF16916 Dimerisation domain of Zinc Transporter BC359_19095 PF01545 Cation efflux family BC359_19100 PF01022 Bacterial regulatory protein, arsR family BC359_19115 PF03631 Virulence factor BrkB BC359_19125 PF01451 Low molecular weight phosphotyrosine protein phosphatase BC359_19130 PF06569 Protein of unknown function (DUF1128) BC359_19135 PF01979 Amidohydrolase family BC359_19135 PF13382 Adenine deaminase C-terminal domain BC359_19140 PF00188 Cysteine-rich secretory protein family BC359_19150 PF01965 DJ-1/PfpI family BC359_19155 PF01235 Sodium:alanine symporter family BC359_19160 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) BC359_19165 PF00970 Oxidoreductase FAD-binding domain BC359_19165 PF00042 Globin BC359_19165 PF00175 Oxidoreductase NAD-binding domain BC359_19170 PF02082 Transcriptional regulator BC359_19175 PF02898 Nitric oxide synthase, oxygenase domain BC359_19180 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain BC359_19185 PF12848 ABC transporter BC359_19185 PF00005 ABC transporter BC359_19200 PF01625 Peptide methionine sulfoxide reductase BC359_19205 PF00686 Starch binding domain BC359_19205 PF01373 Glycosyl hydrolase family 14 BC359_19210 PF04231 Endonuclease I BC359_19230 PF01580 FtsK/SpoIIIE family BC359_19230 PF12538 DNA transporter BC359_19235 PF10140 WXG100 protein secretion system (Wss), protein YukC BC359_19240 PF08817 WXG100 protein secretion system (Wss), protein YukD BC359_19245 PF06013 Proteins of 100 residues with WXG BC359_19255 PF14436 Bacterial EndoU nuclease BC359_19255 PF04740 LXG domain of WXG superfamily BC359_19265 PF00271 Helicase conserved C-terminal domain BC359_19265 PF00270 DEAD/DEAH box helicase BC359_19270 PF00072 Response regulator receiver domain BC359_19270 PF09456 RcsC Alpha-Beta-Loop (ABL) BC359_19270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BC359_19270 PF00512 His Kinase A (phospho-acceptor) domain BC359_19280 PF00512 His Kinase A (phospho-acceptor) domain BC359_19280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BC359_19280 PF00989 PAS fold BC359_19285 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain BC359_19285 PF17203 Single cache domain 3 BC359_19285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BC359_19285 PF00989 PAS fold BC359_19290 PF01544 CorA-like Mg2+ transporter protein BC359_19300 PF01235 Sodium:alanine symporter family BC359_19310 PF12867 DinB superfamily BC359_19340 PF01965 DJ-1/PfpI family BC359_19345 PF00486 Transcriptional regulatory protein, C terminal BC359_19345 PF00072 Response regulator receiver domain BC359_19350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BC359_19350 PF00512 His Kinase A (phospho-acceptor) domain BC359_19350 PF00672 HAMP domain BC359_19365 PF13539 D-alanyl-D-alanine carboxypeptidase BC359_19375 PF03060 Nitronate monooxygenase BC359_19380 PF10282 Lactonase, 7-bladed beta-propeller BC359_19385 PF00557 Metallopeptidase family M24 BC359_19390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BC359_19390 PF00512 His Kinase A (phospho-acceptor) domain BC359_19390 PF00989 PAS fold BC359_19395 PF02608 ABC transporter substrate-binding protein PnrA-like BC359_19400 PF12728 Helix-turn-helix domain BC359_19405 PF01479 S4 domain BC359_19405 PF00849 RNA pseudouridylate synthase BC359_19415 PF00528 Binding-protein-dependent transport system inner membrane component BC359_19420 PF00528 Binding-protein-dependent transport system inner membrane component BC359_19425 PF12849 PBP superfamily domain BC359_19430 PF00005 ABC transporter BC359_19430 PF00664 ABC transporter transmembrane region BC359_19435 PF00571 CBS domain BC359_19435 PF03471 Transporter associated domain BC359_19435 PF01595 Cyclin M transmembrane N-terminal domain BC359_19465 PF00082 Subtilase family BC359_19510 PF02796 Helix-turn-helix domain of resolvase BC359_19510 PF00239 Resolvase, N terminal domain BC359_19515 PF13847 Methyltransferase domain BC359_19515 PF01938 TRAM domain BC359_19515 PF05958 tRNA (Uracil-5-)-methyltransferase BC359_19520 PF00781 Diacylglycerol kinase catalytic domain BC359_19525 PF02934 GatB/GatE catalytic domain BC359_19525 PF02637 GatB domain BC359_19530 PF01425 Amidase BC359_19535 PF02686 Glu-tRNAGln amidotransferase C subunit BC359_19545 PF07537 CamS sex pheromone cAM373 precursor BC359_19550 PF03120 NAD-dependent DNA ligase OB-fold domain BC359_19550 PF01653 NAD-dependent DNA ligase adenylation domain BC359_19550 PF03119 NAD-dependent DNA ligase C4 zinc finger domain BC359_19550 PF12826 Helix-hairpin-helix motif BC359_19550 PF00533 BRCA1 C Terminus (BRCT) domain BC359_19555 PF13361 UvrD-like helicase C-terminal domain BC359_19555 PF00580 UvrD/REP helicase N-terminal domain BC359_19560 PF01884 PcrB family BC359_19565 PF03129 Anticodon binding domain BC359_19565 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) BC359_19570 PF01371 Trp repressor protein BC359_19575 PF13382 Adenine deaminase C-terminal domain BC359_19575 PF01979 Amidohydrolase family BC359_19585 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain BC359_19585 PF02843 Phosphoribosylglycinamide synthetase, C domain BC359_19585 PF02844 Phosphoribosylglycinamide synthetase, N domain BC359_19590 PF02142 MGS-like domain BC359_19590 PF01808 AICARFT/IMPCHase bienzyme BC359_19595 PF00551 Formyl transferase BC359_19600 PF02769 AIR synthase related protein, C-terminal domain BC359_19600 PF00586 AIR synthase related protein, N-terminal domain BC359_19605 PF00156 Phosphoribosyl transferase domain BC359_19610 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain BC359_19610 PF00586 AIR synthase related protein, N-terminal domain BC359_19610 PF02769 AIR synthase related protein, C-terminal domain BC359_19620 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase BC359_19625 PF01259 SAICAR synthetase BC359_19630 PF10397 Adenylosuccinate lyase C-terminus BC359_19630 PF00206 Lyase BC359_19635 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain BC359_19635 PF02222 ATP-grasp domain BC359_19640 PF00731 AIR carboxylase BC359_19645 PF14044 NETI protein BC359_19680 PF00860 Permease family BC359_19685 PF02540 NAD synthase BC359_19685 PF00958 GMP synthase C terminal domain BC359_19685 PF00117 Glutamine amidotransferase class-I BC359_19690 PF01841 Transglutaminase-like superfamily BC359_19690 PF11992 Domain of unknown function (DUF3488) BC359_19690 PF13559 Domain of unknown function (DUF4129) BC359_19695 PF01882 Protein of unknown function DUF58 BC359_19700 PF07726 ATPase family associated with various cellular activities (AAA) BC359_19700 PF17863 AAA lid domain BC359_19715 PF01638 HxlR-like helix-turn-helix BC359_19725 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain BC359_19725 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase BC359_19730 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain BC359_19730 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain BC359_19735 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family BC359_19745 PF00106 short chain dehydrogenase BC359_19760 PF00118 TCP-1/cpn60 chaperonin family BC359_19765 PF00166 Chaperonin 10 Kd subunit BC359_19770 PF02517 CPBP intramembrane metalloprotease BC359_19780 PF00902 Sec-independent protein translocase protein (TatC) BC359_19785 PF02416 mttA/Hcf106 family BC359_19790 PF02629 CoA binding domain BC359_19790 PF06971 Putative DNA-binding protein N-terminus BC359_19795 PF12848 ABC transporter BC359_19795 PF16326 ABC transporter C-terminal domain BC359_19795 PF00005 ABC transporter BC359_19800 PF00814 Glycoprotease family BC359_19805 PF00583 Acetyltransferase (GNAT) family BC359_19810 PF00814 Glycoprotease family BC359_19815 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE BC359_19905 PF16921 Tex protein YqgF-like domain BC359_19905 PF09371 Tex-like protein N-terminal domain BC359_19905 PF17674 HHH domain BC359_19905 PF00575 S1 RNA binding domain BC359_19910 PF07228 Stage II sporulation protein E (SpoIIE) BC359_19915 PF04542 Sigma-70 region 2 BC359_19915 PF04545 Sigma-70, region 4 BC359_19915 PF04539 Sigma-70 region 3 BC359_19920 PF13581 Histidine kinase-like ATPase domain BC359_19925 PF01740 STAS domain BC359_19930 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain BC359_19930 PF07228 Stage II sporulation protein E (SpoIIE) BC359_19935 PF13581 Histidine kinase-like ATPase domain BC359_19940 PF01740 STAS domain BC359_19945 PF01740 STAS domain BC359_19945 PF08678 Rsbr N terminal BC359_19950 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system BC359_19955 PF01402 Ribbon-helix-helix protein, copG family BC359_19960 PF00842 Alanine racemase, C-terminal domain BC359_19960 PF01168 Alanine racemase, N-terminal domain BC359_19970 PF01648 4'-phosphopantetheinyl transferase superfamily BC359_19975 PF01694 Rhomboid family BC359_19980 PF03851 UV-endonuclease UvdE BC359_19985 PF00270 DEAD/DEAH box helicase BC359_19985 PF00271 Helicase conserved C-terminal domain BC359_19990 PF01225 Mur ligase family, catalytic domain BC359_19990 PF08245 Mur ligase middle domain BC359_19990 PF02875 Mur ligase family, glutamate ligase domain BC359_19995 PF07478 D-ala D-ala ligase C-terminus BC359_19995 PF01820 D-ala D-ala ligase N-terminus BC359_20005 PF13416 Bacterial extracellular solute-binding protein BC359_20010 PF00528 Binding-protein-dependent transport system inner membrane component BC359_20015 PF00528 Binding-protein-dependent transport system inner membrane component BC359_20020 PF00005 ABC transporter BC359_20020 PF08402 TOBE domain BC359_20030 PF03306 Alpha-acetolactate decarboxylase BC359_20040 PF01232 Mannitol dehydrogenase Rossmann domain BC359_20040 PF08125 Mannitol dehydrogenase C-terminal domain BC359_20045 PF00874 PRD domain BC359_20045 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BC359_20045 PF05043 Mga helix-turn-helix domain BC359_20045 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BC359_20045 PF08279 HTH domain BC359_20050 PF02378 Phosphotransferase system, EIIC BC359_20050 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit BC359_20050 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 BC359_20060 PF02589 LUD domain BC359_20065 PF11870 Domain of unknown function (DUF3390) BC359_20065 PF13183 4Fe-4S dicluster domain BC359_20065 PF02589 LUD domain BC359_20070 PF02754 Cysteine-rich domain BC359_20075 PF07729 FCD domain BC359_20075 PF00392 Bacterial regulatory proteins, gntR family BC359_20080 PF02652 L-lactate permease BC359_20090 PF01380 SIS domain BC359_20095 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III BC359_20095 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain BC359_20095 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II BC359_20095 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I BC359_20100 PF07949 YbbR-like protein BC359_20105 PF02457 DisA bacterial checkpoint controller nucleotide-binding BC359_20110 PF13490 Putative zinc-finger BC359_20115 PF04542 Sigma-70 region 2 BC359_20115 PF08281 Sigma-70, region 4 BC359_20120 PF00491 Arginase family BC359_20185 PF01522 Polysaccharide deacetylase BC359_20190 PF14089 KinB-signalling pathway activation in sporulation BC359_20195 PF17898 Spore germination GerD central core domain BC359_20200 PF10609 NUBPL iron-transfer P-loop NTPase BC359_20205 PF01520 N-acetylmuramoyl-L-alanine amidase BC359_20230 PF01693 Caulimovirus viroplasmin BC359_20255 PF01527 Transposase BC359_20335 PF13610 DDE domain BC359_20370 PF00512 His Kinase A (phospho-acceptor) domain BC359_20370 PF18698 Histidine kinase sensor domain BC359_20370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BC359_20370 PF00672 HAMP domain BC359_20370 PF00989 PAS fold BC359_20375 PF00196 Bacterial regulatory proteins, luxR family BC359_20375 PF00072 Response regulator receiver domain BC359_20450 PF00877 NlpC/P60 family BC359_20490 PF18840 Large polyvalent protein associated domain 25 BC359_20500 PF13154 Protein of unknown function (DUF3991) BC359_20510 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) BC359_20510 PF01348 Type II intron maturase BC359_20520 PF03734 L,D-transpeptidase catalytic domain BC359_20530 PF00485 Phosphoribulokinase / Uridine kinase family BC359_20565 PF12833 Helix-turn-helix domain BC359_20565 PF06445 GyrI-like small molecule binding domain BC359_20570 PF02796 Helix-turn-helix domain of resolvase BC359_20570 PF00239 Resolvase, N terminal domain BC359_20575 PF13610 DDE domain BC359_20595 PF00474 Sodium:solute symporter family BC359_20605 PF00795 Carbon-nitrogen hydrolase BC359_20620 PF13610 DDE domain BC359_20625 PF05593 RHS Repeat BC359_20650 PF13610 DDE domain BC359_20660 PF00795 Carbon-nitrogen hydrolase BC359_20670 PF13188 PAS domain BC359_20670 PF13426 PAS domain BC359_20670 PF00989 PAS fold BC359_20670 PF00512 His Kinase A (phospho-acceptor) domain BC359_20670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase BC359_20675 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin BC359_20675 PF18277 AbrB C-terminal domain BC359_20720 PF03788 LrgA family BC359_20725 PF04172 LrgB-like family BC359_20730 PF01527 Transposase BC359_20735 PF00665 Integrase core domain BC359_20735 PF13333 Integrase core domain BC359_20735 PF13276 HTH-like domain BC359_20745 PF00291 Pyridoxal-phosphate dependent enzyme BC359_20750 PF03466 LysR substrate binding domain BC359_20750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family BC359_20775 PF00239 Resolvase, N terminal domain BC359_20775 PF02796 Helix-turn-helix domain of resolvase BC359_20860 PF12802 MarR family BC359_20920 PF12802 MarR family BC359_20980 PF12802 MarR family