locus-tag class description COP00_00015 PF03423 Carbohydrate binding domain (family 25) COP00_00015 PF00041 Fibronectin type III domain COP00_00015 PF03065 Glycosyl hydrolase family 57 COP00_00050 PF01464 Transglycosylase SLT domain COP00_00065 PF11962 Peptidase_G2, IMC autoproteolytic cleavage domain COP00_00065 PF12708 Pectate lyase superfamily protein COP00_00085 PF10960 BhlA holin family COP00_00090 PF01471 Putative peptidoglycan binding domain COP00_00090 PF01510 N-acetylmuramoyl-L-alanine amidase COP00_00090 PF01476 LysM domain COP00_00110 PF08863 YolD-like protein COP00_00115 PF00589 Phage integrase family COP00_00115 PF14659 Phage integrase, N-terminal SAM-like domain COP00_00135 PF00583 Acetyltransferase (GNAT) family COP00_00145 PF09953 Uncharacterized protein conserved in bacteria (DUF2187) COP00_00160 PF01943 Polysaccharide biosynthesis protein COP00_00165 PF00578 AhpC/TSA family COP00_00175 PF00557 Metallopeptidase family M24 COP00_00175 PF01321 Creatinase/Prolidase N-terminal domain COP00_00180 PF00356 Bacterial regulatory proteins, lacI family COP00_00180 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family COP00_00185 PF03123 CAT RNA binding domain COP00_00185 PF00874 PRD domain COP00_00190 PF02378 Phosphotransferase system, EIIC COP00_00190 PF00367 phosphotransferase system, EIIB COP00_00190 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 COP00_00195 PF00381 PTS HPr component phosphorylation site COP00_00200 PF05524 PEP-utilising enzyme, N-terminal COP00_00200 PF02896 PEP-utilising enzyme, TIM barrel domain COP00_00200 PF00391 PEP-utilising enzyme, mobile domain COP00_00205 PF11132 Transcriptional regulator protein (SplA) COP00_00215 PF00583 Acetyltransferase (GNAT) family COP00_00230 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase COP00_00230 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase COP00_00235 PF00188 Cysteine-rich secretory protein family COP00_00240 PF00905 Penicillin binding protein transpeptidase domain COP00_00240 PF03717 Penicillin-binding Protein dimerisation domain COP00_00245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase COP00_00245 PF00989 PAS fold COP00_00245 PF00512 His Kinase A (phospho-acceptor) domain COP00_00245 PF08447 PAS fold COP00_00250 PF00155 Aminotransferase class I and II COP00_00265 PF01584 CheW-like domain COP00_00265 PF00072 Response regulator receiver domain COP00_00270 PF14177 YkyB-like protein COP00_00275 PF07690 Major Facilitator Superfamily COP00_00280 PF01476 LysM domain COP00_00280 PF03734 L,D-transpeptidase catalytic domain COP00_00285 PF00149 Calcineurin-like phosphoesterase COP00_00285 PF10518 TAT (twin-arginine translocation) pathway signal sequence COP00_00295 PF10388 EAL-domain associated signalling protein domain COP00_00295 PF00563 EAL domain COP00_00300 PF08796 Protein of unknown function (DUF1797) COP00_00310 PF04308 Ribonuclease H-like COP00_00315 PF14156 Antirepressor AbbA COP00_00325 PF03466 LysR substrate binding domain COP00_00325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family COP00_00330 PF00258 Flavodoxin COP00_00340 PF00258 Flavodoxin COP00_00345 PF14602 Hexapeptide repeat of succinyl-transferase COP00_00345 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal COP00_00345 PF00132 Bacterial transferase hexapeptide (six repeats) COP00_00350 PF07687 Peptidase dimerisation domain COP00_00350 PF01546 Peptidase family M20/M25/M40 COP00_00355 PF03698 Uncharacterised protein family (UPF0180) COP00_00360 PF00578 AhpC/TSA family COP00_00360 PF10417 C-terminal domain of 1-Cys peroxiredoxin COP00_00365 PF00578 AhpC/TSA family COP00_00380 PF12804 MobA-like NTP transferase domain COP00_00390 PF00994 Probable molybdopterin binding domain COP00_00390 PF03454 MoeA C-terminal region (domain IV) COP00_00390 PF03453 MoeA N-terminal region (domain I and II) COP00_00395 PF03205 Molybdopterin guanine dinucleotide synthesis protein B COP00_00400 PF02391 MoaE protein COP00_00405 PF02597 ThiS family COP00_00415 PF00005 ABC transporter COP00_00415 PF00664 ABC transporter transmembrane region COP00_00420 PF00005 ABC transporter COP00_00420 PF00664 ABC transporter transmembrane region COP00_00425 PF04893 Yip1 domain COP00_00430 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion COP00_00435 PF00005 ABC transporter COP00_00440 PF02687 FtsX-like permease family COP00_00440 PF12704 MacB-like periplasmic core domain COP00_00445 PF04893 Yip1 domain COP00_00450 PF08220 DeoR-like helix-turn-helix domain COP00_00450 PF00455 DeoR C terminal sensor domain COP00_00455 PF00294 pfkB family carbohydrate kinase COP00_00460 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit COP00_00460 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 COP00_00465 PF10502 Signal peptidase, peptidase S26 COP00_00480 PF12848 ABC transporter COP00_00480 PF00005 ABC transporter COP00_00485 PF02073 Thermophilic metalloprotease (M29) COP00_00490 PF17447 Uncharacterized YkpC-like COP00_00500 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin COP00_00500 PF18277 AbrB C-terminal domain COP00_00505 PF00989 PAS fold COP00_00505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase COP00_00505 PF00512 His Kinase A (phospho-acceptor) domain COP00_00510 PF02080 TrkA-C domain COP00_00510 PF02254 TrkA-N domain COP00_00515 PF01979 Amidohydrolase family COP00_00515 PF13382 Adenine deaminase C-terminal domain COP00_00520 PF00753 Metallo-beta-lactamase superfamily COP00_00520 PF17770 Ribonuclease J C-terminal domain COP00_00520 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain COP00_00535 PF01327 Polypeptide deformylase COP00_00545 PF10368 Putative cell-wall binding lipoprotein COP00_00550 PF00676 Dehydrogenase E1 component COP00_00555 PF02779 Transketolase, pyrimidine binding domain COP00_00555 PF02780 Transketolase, C-terminal domain COP00_00565 PF07992 Pyridine nucleotide-disulphide oxidoreductase COP00_00565 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain COP00_00575 PF13790 SR1 protein COP00_00580 PF01276 Orn/Lys/Arg decarboxylase, major domain COP00_00580 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain COP00_00585 PF05256 Uncharacterised protein family (UPF0223) COP00_00590 PF06335 Protein of unknown function (DUF1054) COP00_00600 PF00459 Inositol monophosphatase family COP00_00605 PF00583 Acetyltransferase (GNAT) family COP00_00610 PF13490 Putative zinc-finger COP00_00615 PF17259 Family of unknown function (DUF5325) COP00_00625 PF14036 YlaH-like protein COP00_00630 PF01047 MarR family COP00_00635 PF01494 FAD binding domain COP00_00640 PF09963 Uncharacterized protein conserved in bacteria (DUF2197) COP00_00645 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) COP00_00650 PF13638 PIN domain COP00_00650 PF02562 PhoH-like protein COP00_00660 PF04960 Glutaminase COP00_00665 PF07408 Protein of unknown function (DUF1507) COP00_00670 PF01098 Cell cycle protein COP00_00675 PF02436 Conserved carboxylase domain COP00_00675 PF02785 Biotin carboxylase C-terminal domain COP00_00675 PF00364 Biotin-requiring enzyme COP00_00675 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain COP00_00675 PF00682 HMGL-like COP00_00675 PF00289 Biotin carboxylase, N-terminal domain COP00_00680 PF02628 Cytochrome oxidase assembly protein COP00_00685 PF01040 UbiA prenyltransferase family COP00_00690 PF00034 Cytochrome c COP00_00690 PF02790 Cytochrome C oxidase subunit II, transmembrane domain COP00_00690 PF00116 Cytochrome C oxidase subunit II, periplasmic domain COP00_00695 PF00115 Cytochrome C and Quinol oxidase polypeptide I COP00_00700 PF00510 Cytochrome c oxidase subunit III COP00_00705 PF03626 Prokaryotic Cytochrome C oxidase subunit IV COP00_00710 PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) COP00_00715 PF08868 YugN-like family COP00_00720 PF00571 CBS domain COP00_00725 PF00188 Cysteine-rich secretory protein family COP00_00725 PF14504 CAP-associated N-terminal COP00_00735 PF14071 Putative coat protein COP00_00740 PF14003 YlbE-like protein COP00_00745 PF06133 Control of competence regulator ComK, YlbF/YmcA COP00_00750 PF09902 Uncharacterized protein conserved in bacteria (DUF2129) COP00_00760 PF01467 Cytidylyltransferase-like COP00_00765 PF07670 Nucleoside recognition COP00_00770 PF05362 Lon protease (S16) C-terminal proteolytic domain COP00_00770 PF13180 PDZ domain COP00_00775 PF05636 HIGH Nucleotidyl Transferase COP00_00780 PF02620 Large ribosomal RNA subunit accumulation protein YceD COP00_00785 PF01783 Ribosomal L32p protein family COP00_00795 PF00583 Acetyltransferase (GNAT) family COP00_00800 PF02558 Ketopantoate reductase PanE/ApbA COP00_00800 PF08546 Ketopantoate reductase PanE/ApbA C terminal COP00_00805 PF10079 Bacillithiol biosynthesis BshC COP00_00810 PF02381 MraZ protein, putative antitoxin-like COP00_00815 PF01795 MraW methylase family COP00_00830 PF03793 PASTA domain COP00_00830 PF03717 Penicillin-binding Protein dimerisation domain COP00_00830 PF00905 Penicillin binding protein transpeptidase domain COP00_00835 PF01225 Mur ligase family, catalytic domain COP00_00835 PF02875 Mur ligase family, glutamate ligase domain COP00_00835 PF08245 Mur ligase middle domain COP00_00840 PF00953 Glycosyl transferase family 4 COP00_00840 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 COP00_00845 PF02875 Mur ligase family, glutamate ligase domain COP00_00845 PF08245 Mur ligase middle domain COP00_00850 PF01098 Cell cycle protein COP00_00855 PF04101 Glycosyltransferase family 28 C-terminal domain COP00_00855 PF03033 Glycosyltransferase family 28 N-terminal domain COP00_00860 PF01565 FAD binding domain COP00_00860 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain COP00_00865 PF08478 POTRA domain, FtsQ-type COP00_00870 PF05949 Bacterial protein of unknown function (DUF881) COP00_00875 PF05949 Bacterial protein of unknown function (DUF881) COP00_00880 PF06947 Protein of unknown function (DUF1290) COP00_00885 PF02491 SHS2 domain inserted in FTSA COP00_00890 PF12327 FtsZ family, C-terminal domain COP00_00890 PF00091 Tubulin/FtsZ family, GTPase domain COP00_00895 PF00082 Subtilase family COP00_00895 PF05922 Peptidase inhibitor I9 COP00_00900 PF00082 Subtilase family COP00_00900 PF05922 Peptidase inhibitor I9 COP00_00905 PF03419 Sporulation factor SpoIIGA COP00_00910 PF04545 Sigma-70, region 4 COP00_00910 PF04542 Sigma-70 region 2 COP00_00915 PF04542 Sigma-70 region 2 COP00_00915 PF04545 Sigma-70, region 4 COP00_00915 PF04539 Sigma-70 region 3 COP00_00920 PF00005 ABC transporter COP00_00925 PF08241 Methyltransferase domain COP00_00930 PF05239 PRC-barrel domain COP00_00940 PF01168 Alanine racemase, N-terminal domain COP00_00945 PF04472 Cell division protein SepF COP00_00950 PF02325 YGGT family COP00_00955 PF17774 Putative RNA-binding domain in YlmH COP00_00955 PF01479 S4 domain COP00_00960 PF05103 DivIVA protein COP00_00965 PF08264 Anticodon-binding domain of tRNA COP00_00965 PF00133 tRNA synthetases class I (I, L, M and V) COP00_00965 PF06827 Zinc finger found in FPG and IleRS COP00_00970 PF01258 Prokaryotic dksA/traR C4-type zinc finger COP00_00975 PF01252 Signal peptidase (SPase) II COP00_00980 PF01479 S4 domain COP00_00980 PF00849 RNA pseudouridylate synthase COP00_00985 PF00156 Phosphoribosyl transferase domain COP00_00990 PF00860 Permease family COP00_00995 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain COP00_00995 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain COP00_01000 PF01979 Amidohydrolase family COP00_01005 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain COP00_01005 PF00117 Glutamine amidotransferase class-I COP00_01010 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain COP00_01010 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain COP00_01010 PF02142 MGS-like domain COP00_01015 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B COP00_01015 PF00175 Oxidoreductase NAD-binding domain COP00_01020 PF01180 Dihydroorotate dehydrogenase COP00_01030 PF00156 Phosphoribosyl transferase domain COP00_01040 PF01507 Phosphoadenosine phosphosulfate reductase family COP00_01045 PF01384 Phosphate transporter family COP00_01050 PF01747 ATP-sulfurylase COP00_01050 PF14306 PUA-like domain COP00_01060 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases COP00_01065 PF01903 CbiX COP00_01080 PF00689 Cation transporting ATPase, C-terminus COP00_01080 PF00690 Cation transporter/ATPase, N-terminus COP00_01085 PF08340 Domain of unknown function (DUF1732) COP00_01085 PF03755 YicC-like family, N-terminal region COP00_01090 PF04025 Domain of unknown function (DUF370) COP00_01095 PF00625 Guanylate kinase COP00_01100 PF01192 RNA polymerase Rpb6 COP00_01105 PF02441 Flavoprotein COP00_01105 PF04127 DNA / pantothenate metabolism flavoprotein COP00_01110 PF00271 Helicase conserved C-terminal domain COP00_01110 PF04851 Type III restriction enzyme, res subunit COP00_01110 PF18074 Primosomal protein N C-terminal domain COP00_01110 PF18319 PriA DNA helicase Cys-rich region (CRR) domain COP00_01110 PF17764 3′ DNA-binding domain (3′BD) COP00_01115 PF01327 Polypeptide deformylase COP00_01120 PF00551 Formyl transferase COP00_01120 PF02911 Formyl transferase, C-terminal domain COP00_01125 PF01189 16S rRNA methyltransferase RsmB/F COP00_01125 PF01029 NusB family COP00_01130 PF04055 Radical SAM superfamily COP00_01140 PF00069 Protein kinase domain COP00_01140 PF03793 PASTA domain COP00_01145 PF16745 RsgA N-terminal domain COP00_01145 PF03193 RsgA GTPase COP00_01150 PF00834 Ribulose-phosphate 3 epimerase family COP00_01155 PF04263 Thiamin pyrophosphokinase, catalytic domain COP00_01155 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain COP00_01160 PF08183 Stage V sporulation protein family COP00_01165 PF00830 Ribosomal L28 family COP00_01170 PF03780 Asp23 family, cell envelope-related function COP00_01175 PF02734 DAK2 domain COP00_01175 PF13684 Dihydroxyacetone kinase family COP00_01180 PF01842 ACT domain COP00_01180 PF03315 Serine dehydratase beta chain COP00_01185 PF03313 Serine dehydratase alpha chain COP00_01190 PF00271 Helicase conserved C-terminal domain COP00_01190 PF00270 DEAD/DEAH box helicase COP00_01190 PF17191 RecG wedge domain COP00_01195 PF03061 Thioesterase superfamily COP00_01195 PF08279 HTH domain COP00_01200 PF02504 Fatty acid synthesis protein COP00_01205 PF00698 Acyl transferase domain COP00_01215 PF00550 Phosphopantetheine attachment site COP00_01220 PF14622 Ribonuclease-III-like COP00_01220 PF00035 Double-stranded RNA binding motif COP00_01230 PF00448 SRP54-type protein, GTPase domain COP00_01230 PF02881 SRP54-type protein, helical bundle domain COP00_01235 PF04297 Putative helix-turn-helix protein, YlxM / p13 like COP00_01240 PF02978 Signal peptide binding domain COP00_01240 PF00448 SRP54-type protein, GTPase domain COP00_01240 PF02881 SRP54-type protein, helical bundle domain COP00_01245 PF00886 Ribosomal protein S16 COP00_01255 PF11068 YlqD protein COP00_01260 PF01782 RimM N-terminal domain COP00_01260 PF05239 PRC-barrel domain COP00_01265 PF01746 tRNA (Guanine-1)-methyltransferase COP00_01270 PF01245 Ribosomal protein L19 COP00_01275 PF01926 50S ribosome-binding GTPase COP00_01280 PF01351 Ribonuclease HII COP00_01290 PF01312 FlhB HrpN YscU SpaS Family COP00_01295 PF08442 ATP-grasp domain COP00_01295 PF00549 CoA-ligase COP00_01300 PF00549 CoA-ligase COP00_01300 PF02629 CoA binding domain COP00_01305 PF02481 DNA recombination-mediator protein A COP00_01310 PF01131 DNA topoisomerase COP00_01310 PF01751 Toprim domain COP00_01310 PF01396 Topoisomerase DNA binding C4 zinc finger COP00_01315 PF01134 Glucose inhibited division protein A COP00_01320 PF00589 Phage integrase family COP00_01320 PF02899 Phage integrase, N-terminal SAM-like domain COP00_01325 PF00227 Proteasome subunit COP00_01330 PF10431 C-terminal, D2-small domain, of ClpB protein COP00_01330 PF00004 ATPase family associated with various cellular activities (AAA) COP00_01330 PF07724 AAA domain (Cdc48 subfamily) COP00_01335 PF06018 CodY GAF-like domain COP00_01335 PF08222 CodY helix-turn-helix domain COP00_01340 PF00460 Flagella basal body rod protein COP00_01345 PF00460 Flagella basal body rod protein COP00_01345 PF06429 Flagellar basal body rod FlgEFG protein C-terminal COP00_01350 PF02049 Flagellar hook-basal body complex protein FliE COP00_01355 PF01514 Secretory protein of YscJ/FliF family COP00_01355 PF08345 Flagellar M-ring protein C-terminal COP00_01360 PF01706 FliG C-terminal domain COP00_01360 PF14842 FliG N-terminal domain COP00_01360 PF14841 FliG middle domain COP00_01365 PF02108 Flagellar assembly protein FliH COP00_01370 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain COP00_01370 PF18269 T3SS EscN ATPase C-terminal domain COP00_01370 PF02874 ATP synthase alpha/beta family, beta-barrel domain COP00_01375 PF02050 Flagellar FliJ protein COP00_01385 PF02120 Flagellar hook-length control protein FliK COP00_01390 PF03963 Flagellar hook capping protein - N-terminal region COP00_01395 PF00460 Flagella basal body rod protein COP00_01395 PF06429 Flagellar basal body rod FlgEFG protein C-terminal COP00_01400 PF06289 Flagellar and Swarming motility proteins COP00_01405 PF03748 Flagellar basal body-associated protein FliL COP00_01410 PF02154 Flagellar motor switch protein FliM COP00_01410 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term COP00_01415 PF04509 CheC-like family COP00_01415 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term COP00_01420 PF00072 Response regulator receiver domain COP00_01425 PF04347 Flagellar biosynthesis protein, FliO COP00_01430 PF00813 FliP family COP00_01435 PF01313 Bacterial export proteins, family 3 COP00_01440 PF01311 Bacterial export proteins, family 1 COP00_01445 PF01312 FlhB HrpN YscU SpaS Family COP00_01450 PF00771 FHIPEP family COP00_01455 PF00448 SRP54-type protein, GTPase domain COP00_01460 PF10609 NUBPL iron-transfer P-loop NTPase COP00_01465 PF01339 CheB methylesterase COP00_01465 PF00072 Response regulator receiver domain COP00_01470 PF01627 Hpt domain COP00_01470 PF07194 P2 response regulator binding domain COP00_01470 PF02895 Signal transducing histidine kinase, homodimeric domain COP00_01470 PF01584 CheW-like domain COP00_01470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase COP00_01475 PF01584 CheW-like domain COP00_01480 PF04509 CheC-like family COP00_01485 PF03975 CheD chemotactic sensory transduction COP00_01490 PF04545 Sigma-70, region 4 COP00_01490 PF04542 Sigma-70 region 2 COP00_01490 PF04539 Sigma-70 region 3 COP00_01500 PF00318 Ribosomal protein S2 COP00_01505 PF00889 Elongation factor TS COP00_01510 PF00696 Amino acid kinase family COP00_01515 PF01765 Ribosome recycling factor COP00_01520 PF01255 Putative undecaprenyl diphosphate synthase COP00_01530 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase COP00_01530 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain COP00_01530 PF13288 DXP reductoisomerase C-terminal domain COP00_01535 PF17820 PDZ domain COP00_01535 PF02163 Peptidase family M50 COP00_01540 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) COP00_01540 PF03129 Anticodon binding domain COP00_01540 PF04073 Aminoacyl-tRNA editing domain COP00_01545 PF00929 Exonuclease COP00_01545 PF02811 PHP domain COP00_01545 PF11490 DNA polymerase III polC-type N-terminus II COP00_01545 PF14480 DNA polymerase III polC-type N-terminus I COP00_01545 PF07733 Bacterial DNA polymerase III alpha NTPase domain COP00_01545 PF17657 Bacterial DNA polymerase III alpha subunit finger domain COP00_01545 PF14579 Helix-hairpin-helix motif COP00_01550 PF18801 response regulator aspartate phosphatase H, N terminal COP00_01560 PF17384 RimP C-terminal SH3 domain COP00_01560 PF02576 RimP N-terminal domain COP00_01565 PF08529 NusA N-terminal domain COP00_01565 PF00575 S1 RNA binding domain COP00_01565 PF13184 NusA-like KH domain COP00_01570 PF04296 Protein of unknown function (DUF448) COP00_01575 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family COP00_01580 PF11987 Translation-initiation factor 2 COP00_01580 PF04760 Translation initiation factor IF-2, N-terminal region COP00_01580 PF00009 Elongation factor Tu GTP binding domain COP00_01585 PF04456 Protein of unknown function (DUF503) COP00_01590 PF02033 Ribosome-binding factor A COP00_01595 PF01509 TruB family pseudouridylate synthase (N terminal domain) COP00_01595 PF16198 tRNA pseudouridylate synthase B C-terminal domain COP00_01600 PF01687 Riboflavin kinase COP00_01600 PF06574 FAD synthetase COP00_01605 PF00312 Ribosomal protein S15 COP00_01610 PF00575 S1 RNA binding domain COP00_01610 PF03725 3' exoribonuclease family, domain 2 COP00_01610 PF01138 3' exoribonuclease family, domain 1 COP00_01610 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain COP00_01610 PF00013 KH domain COP00_01615 PF01522 Polysaccharide deacetylase COP00_01620 PF00675 Insulinase (Peptidase family M16) COP00_01620 PF05193 Peptidase M16 inactive domain COP00_01625 PF05239 PRC-barrel domain COP00_01635 PF02441 Flavoprotein COP00_01640 PF02774 Semialdehyde dehydrogenase, dimerisation domain COP00_01640 PF01118 Semialdehyde dehydrogenase, NAD binding domain COP00_01645 PF00696 Amino acid kinase family COP00_01645 PF13840 ACT domain COP00_01650 PF00701 Dihydrodipicolinate synthetase family COP00_01655 PF00753 Metallo-beta-lactamase superfamily COP00_01655 PF17770 Ribonuclease J C-terminal domain COP00_01655 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain COP00_01665 PF00574 Clp protease COP00_01670 PF14035 YlzJ-like protein COP00_01675 PF17854 FtsK alpha domain COP00_01675 PF09397 Ftsk gamma domain COP00_01675 PF01580 FtsK/SpoIIIE family COP00_01680 PF00392 Bacterial regulatory proteins, gntR family COP00_01680 PF07702 UTRA domain COP00_01685 PF07690 Major Facilitator Superfamily COP00_01690 PF05193 Peptidase M16 inactive domain COP00_01695 PF00675 Insulinase (Peptidase family M16) COP00_01695 PF05193 Peptidase M16 inactive domain COP00_01705 PF11588 Protein of unknown function (DUF3243) COP00_01710 PF11868 Protein of unknown function (DUF3388) COP00_01715 PF13464 Domain of unknown function (DUF4115) COP00_01720 PF01066 CDP-alcohol phosphatidyltransferase COP00_01730 PF00154 recA bacterial DNA recombination protein COP00_01735 PF01966 HD domain COP00_01735 PF00013 KH domain COP00_01735 PF12072 Domain of unknown function (DUF3552) COP00_01740 PF13277 YmdB-like protein COP00_01745 PF04232 Stage V sporulation protein S (SpoVS) COP00_01750 PF01244 Membrane dipeptidase (Peptidase family M19) COP00_01755 PF08240 Alcohol dehydrogenase GroES-like domain COP00_01755 PF00107 Zinc-binding dehydrogenase COP00_01760 PF00155 Aminotransferase class I and II COP00_01765 PF01938 TRAM domain COP00_01765 PF00919 Uncharacterized protein family UPF0004 COP00_01765 PF04055 Radical SAM superfamily COP00_01770 PF06133 Control of competence regulator ComK, YlbF/YmcA COP00_01775 PF10628 Outer spore coat protein E (CotE) COP00_01780 PF00488 MutS domain V COP00_01780 PF05188 MutS domain II COP00_01780 PF05192 MutS domain III COP00_01780 PF05190 MutS family domain IV COP00_01780 PF01624 MutS domain I COP00_01785 PF08676 MutL C terminal dimerisation domain COP00_01785 PF01119 DNA mismatch repair protein, C-terminal domain COP00_01790 PF00722 Glycosyl hydrolases family 16 COP00_01800 PF13302 Acetyltransferase (GNAT) domain COP00_01865 PF09680 Family of unknown function COP00_01870 PF12945 Flagellar protein YcgR COP00_01870 PF07238 PilZ domain COP00_01885 PF04303 PrpF protein COP00_01890 PF00544 Pectate lyase COP00_01895 PF04616 Glycosyl hydrolases family 43 COP00_01905 PF01037 Lrp/AsnC ligand binding domain COP00_01910 PF00724 NADH:flavin oxidoreductase / NADH oxidase family COP00_01915 PF04073 Aminoacyl-tRNA editing domain COP00_01935 PF01979 Amidohydrolase family COP00_01950 PF01270 Glycosyl hydrolases family 8 COP00_01965 PF00842 Alanine racemase, C-terminal domain COP00_01965 PF01168 Alanine racemase, N-terminal domain COP00_01980 PF06912 Protein of unknown function (DUF1275) COP00_01990 PF07690 Major Facilitator Superfamily COP00_01995 PF13193 AMP-binding enzyme C-terminal domain COP00_01995 PF00668 Condensation domain COP00_01995 PF00550 Phosphopantetheine attachment site COP00_01995 PF00501 AMP-binding enzyme COP00_02000 PF13193 AMP-binding enzyme C-terminal domain COP00_02000 PF00668 Condensation domain COP00_02000 PF00501 AMP-binding enzyme COP00_02000 PF00550 Phosphopantetheine attachment site COP00_02010 PF01906 Putative heavy-metal-binding COP00_02015 PF09335 SNARE associated Golgi protein COP00_02020 PF00144 Beta-lactamase COP00_02020 PF11954 Domain of unknown function (DUF3471) COP00_02025 PF04101 Glycosyltransferase family 28 C-terminal domain COP00_02030 PF13520 Amino acid permease COP00_02035 PF07875 Coat F domain COP00_02045 PF01476 LysM domain COP00_02045 PF00704 Glycosyl hydrolases family 18 COP00_02050 PF00440 Bacterial regulatory proteins, tetR family COP00_02055 PF12680 SnoaL-like domain COP00_02060 PF01370 NAD dependent epimerase/dehydratase family COP00_02065 PF02566 OsmC-like protein COP00_02070 PF00893 Small Multidrug Resistance protein COP00_02075 PF00893 Small Multidrug Resistance protein COP00_02085 PF12788 YmaF family COP00_02095 PF17209 Hfq protein COP00_02105 PF07972 NrdI Flavodoxin like COP00_02110 PF02867 Ribonucleotide reductase, barrel domain COP00_02110 PF00317 Ribonucleotide reductase, all-alpha domain COP00_02110 PF08343 Ribonucleotide reductase N-terminal COP00_02115 PF00268 Ribonucleotide reductase, small chain COP00_02125 PF00392 Bacterial regulatory proteins, gntR family COP00_02125 PF07729 FCD domain COP00_02130 PF13536 Putative multidrug resistance efflux transporter COP00_02135 PF05036 Sporulation related domain COP00_02135 PF01520 N-acetylmuramoyl-L-alanine amidase COP00_02150 PF17094 Uncharacterised protein family (UPF0715) COP00_02170 PF09346 SMI1 / KNR4 family (SUKH-1) COP00_02185 PF17866 AAA lid domain COP00_02185 PF00004 ATPase family associated with various cellular activities (AAA) COP00_02200 PF09346 SMI1 / KNR4 family (SUKH-1) COP00_02205 PF04740 LXG domain of WXG superfamily COP00_02205 PF14411 A nuclease of the HNH/ENDO VII superfamily with conserved LHH COP00_02240 PF18801 response regulator aspartate phosphatase H, N terminal COP00_02260 PF01510 N-acetylmuramoyl-L-alanine amidase COP00_02265 PF11962 Peptidase_G2, IMC autoproteolytic cleavage domain COP00_02265 PF12708 Pectate lyase superfamily protein COP00_02280 PF05709 Phage tail protein COP00_02285 PF01551 Peptidase family M23 COP00_02285 PF10145 Phage-related minor tail protein COP00_02285 PF01464 Transglycosylase SLT domain COP00_02290 PF01464 Transglycosylase SLT domain COP00_02290 PF10145 Phage-related minor tail protein COP00_02290 PF01551 Peptidase family M23 COP00_02295 PF01551 Peptidase family M23 COP00_02295 PF10145 Phage-related minor tail protein COP00_02295 PF01464 Transglycosylase SLT domain COP00_02375 PF13495 Phage integrase, N-terminal SAM-like domain COP00_02375 PF00589 Phage integrase family COP00_02470 PF03237 Terminase-like family COP00_02500 PF09642 YonK protein COP00_02510 PF00216 Bacterial DNA-binding protein COP00_02530 PF01510 N-acetylmuramoyl-L-alanine amidase COP00_02530 PF01471 Putative peptidoglycan binding domain COP00_02625 PF13443 Cro/C1-type HTH DNA-binding domain COP00_02700 PF02899 Phage integrase, N-terminal SAM-like domain COP00_02700 PF00589 Phage integrase family COP00_02705 PF14072 DNA-sulfur modification-associated COP00_02800 PF01068 ATP dependent DNA ligase domain COP00_02865 PF00082 Subtilase family COP00_02865 PF05922 Peptidase inhibitor I9 COP00_02910 PF06725 3D domain COP00_02935 PF01555 DNA methylase COP00_02980 PF07972 NrdI Flavodoxin like COP00_02985 PF08343 Ribonucleotide reductase N-terminal COP00_02985 PF02867 Ribonucleotide reductase, barrel domain COP00_02985 PF00317 Ribonucleotide reductase, all-alpha domain COP00_02990 PF08343 Ribonucleotide reductase N-terminal COP00_02990 PF02867 Ribonucleotide reductase, barrel domain COP00_02990 PF00317 Ribonucleotide reductase, all-alpha domain COP00_02990 PF14528 LAGLIDADG-like domain COP00_03000 PF00145 C-5 cytosine-specific DNA methylase COP00_03005 PF00268 Ribonucleotide reductase, small chain COP00_03010 PF00085 Thioredoxin COP00_03030 PF00692 dUTPase COP00_03045 PF00303 Thymidylate synthase COP00_03070 PF00269 Small, acid-soluble spore proteins, alpha/beta type COP00_03095 PF08719 Domain of unknown function (DUF1768) COP00_03110 PF00004 ATPase family associated with various cellular activities (AAA) COP00_03110 PF17866 AAA lid domain COP00_03115 PF01926 50S ribosome-binding GTPase COP00_03115 PF13167 GTP-binding GTPase N-terminal COP00_03115 PF16360 GTP-binding GTPase Middle Region COP00_03120 PF06838 Methionine gamma-lyase COP00_03125 PF13411 MerR HTH family regulatory protein COP00_03130 PF03951 Glutamine synthetase, beta-Grasp domain COP00_03130 PF00120 Glutamine synthetase, catalytic domain COP00_03135 PF02899 Phage integrase, N-terminal SAM-like domain COP00_03135 PF00589 Phage integrase family COP00_03155 PF09669 Phage regulatory protein Rha (Phage_pRha) COP00_03155 PF03374 Phage antirepressor protein KilAC domain COP00_03255 PF03354 Phage Terminase COP00_03270 PF00574 Clp protease COP00_03315 PF01464 Transglycosylase SLT domain COP00_03325 PF13457 GW (Gly-Tryp) dipeptide domain COP00_03325 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase COP00_03330 PF12708 Pectate lyase superfamily protein COP00_03330 PF11962 Peptidase_G2, IMC autoproteolytic cleavage domain COP00_03350 PF05105 Bacteriophage holin family COP00_03355 PF01471 Putative peptidoglycan binding domain COP00_03355 PF01510 N-acetylmuramoyl-L-alanine amidase COP00_03400 PF07690 Major Facilitator Superfamily COP00_03410 PF02080 TrkA-C domain COP00_03415 PF00999 Sodium/hydrogen exchanger family COP00_03430 PF17094 Uncharacterised protein family (UPF0715) COP00_03440 PF00692 dUTPase COP00_03450 PF02224 Cytidylate kinase COP00_03455 PF11518 Protein of unknown function (DUF3221) COP00_03465 PF09680 Family of unknown function COP00_03475 PF01593 Flavin containing amine oxidoreductase COP00_03485 PF17934 Tetracyclin repressor-like, C-terminal domain COP00_03485 PF00440 Bacterial regulatory proteins, tetR family COP00_03490 PF00893 Small Multidrug Resistance protein COP00_03495 PF00893 Small Multidrug Resistance protein COP00_03500 PF13302 Acetyltransferase (GNAT) domain COP00_03510 PF13783 Domain of unknown function (DUF4177) COP00_03515 PF00578 AhpC/TSA family COP00_03535 PF00440 Bacterial regulatory proteins, tetR family COP00_03535 PF08360 QacR-like protein, C-terminal region COP00_03555 PF00303 Thymidylate synthase COP00_03565 PF11962 Peptidase_G2, IMC autoproteolytic cleavage domain COP00_03565 PF12708 Pectate lyase superfamily protein COP00_03575 PF00717 Peptidase S24-like COP00_03575 PF01726 LexA DNA binding domain COP00_03580 PF01476 LysM domain COP00_03585 PF00239 Resolvase, N terminal domain COP00_03590 PF05979 Bacterial protein of unknown function (DUF896) COP00_03595 PF02780 Transketolase, C-terminal domain COP00_03595 PF02779 Transketolase, pyrimidine binding domain COP00_03595 PF00456 Transketolase, thiamine diphosphate binding domain COP00_03600 PF10747 Sporulation inhibitor of replication protein SirA COP00_03605 PF03672 Uncharacterised protein family (UPF0154) COP00_03610 PF09388 Spo0E like sporulation regulatory protein COP00_03615 PF02683 Cytochrome C biogenesis protein transmembrane region COP00_03620 PF00072 Response regulator receiver domain COP00_03625 PF07301 Protein of unknown function (DUF1453) COP00_03630 PF11084 Protein of unknown function (DUF2621) COP00_03640 PF08179 Small acid-soluble spore protein P family COP00_03650 PF00330 Aconitase family (aconitate hydratase) COP00_03650 PF00694 Aconitase C-terminal domain COP00_03655 PF00578 AhpC/TSA family COP00_03660 PF13040 Fur-regulated basic protein B COP00_03665 PF08177 Small acid-soluble spore protein N family COP00_03675 PF03061 Thioesterase superfamily COP00_03685 PF01521 Iron-sulphur cluster biosynthesis COP00_03690 PF02660 Glycerol-3-phosphate acyltransferase COP00_03695 PF13380 CoA binding domain COP00_03700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase COP00_03700 PF01751 Toprim domain COP00_03700 PF00986 DNA gyrase B subunit, carboxyl terminus COP00_03700 PF00204 DNA gyrase B COP00_03705 PF00521 DNA gyrase/topoisomerase IV, subunit A COP00_03705 PF03989 DNA gyrase C-terminal domain, beta-propeller COP00_03710 PF00392 Bacterial regulatory proteins, gntR family COP00_03720 PF00596 Class II Aldolase and Adducin N-terminal domain COP00_03725 PF02610 L-arabinose isomerase COP00_03725 PF11762 L-arabinose isomerase C-terminal domain COP00_03730 PF00083 Sugar (and other) transporter COP00_03735 PF00106 short chain dehydrogenase COP00_03755 PF02665 Nitrate reductase gamma subunit COP00_03760 PF02613 Nitrate reductase delta subunit COP00_03765 PF13247 4Fe-4S dicluster domain COP00_03765 PF14711 Respiratory nitrate reductase beta C-terminal COP00_03770 PF01568 Molydopterin dinucleotide binding domain COP00_03770 PF14710 Respiratory nitrate reductase alpha N-terminal COP00_03770 PF00384 Molybdopterin oxidoreductase COP00_03785 PF04055 Radical SAM superfamily COP00_03785 PF13186 Iron-sulfur cluster-binding domain COP00_03795 PF14256 YwiC-like protein COP00_03800 PF00325 Bacterial regulatory proteins, crp family COP00_03800 PF00027 Cyclic nucleotide-binding domain COP00_03805 PF07690 Major Facilitator Superfamily COP00_03815 PF13545 Crp-like helix-turn-helix domain COP00_03815 PF00027 Cyclic nucleotide-binding domain COP00_03820 PF00115 Cytochrome C and Quinol oxidase polypeptide I COP00_03830 PF01814 Hemerythrin HHE cation binding domain COP00_03830 PF04405 Domain of Unknown function (DUF542) COP00_03835 PF07098 Protein of unknown function (DUF1360) COP00_03840 PF00150 Cellulase (glycosyl hydrolase family 5) COP00_03840 PF00942 Cellulose binding domain COP00_03845 PF17452 Uncharacterized YnfE-like COP00_03850 PF13302 Acetyltransferase (GNAT) domain COP00_03870 PF00391 PEP-utilising enzyme, mobile domain COP00_03870 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain COP00_03880 PF01451 Low molecular weight phosphotyrosine protein phosphatase COP00_03885 PF01758 Sodium Bile acid symporter family COP00_03890 PF01022 Bacterial regulatory protein, arsR family COP00_03895 PF01965 DJ-1/PfpI family COP00_03925 PF05437 Branched-chain amino acid transport protein (AzlD) COP00_03930 PF03591 AzlC protein COP00_03935 PF00392 Bacterial regulatory proteins, gntR family COP00_03935 PF00155 Aminotransferase class I and II COP00_03955 PF00378 Enoyl-CoA hydratase/isomerase COP00_03960 PF00171 Aldehyde dehydrogenase family COP00_03965 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase COP00_03965 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase COP00_03970 PF02770 Acyl-CoA dehydrogenase, middle domain COP00_03970 PF02771 Acyl-CoA dehydrogenase, N-terminal domain COP00_03970 PF00441 Acyl-CoA dehydrogenase, C-terminal domain COP00_03980 PF13411 MerR HTH family regulatory protein COP00_03995 PF08240 Alcohol dehydrogenase GroES-like domain COP00_03995 PF00107 Zinc-binding dehydrogenase COP00_04000 PF00027 Cyclic nucleotide-binding domain COP00_04010 PF07563 Protein of unknown function (DUF1541) COP00_04015 PF02702 Osmosensitive K+ channel His kinase sensor domain COP00_04020 PF02669 K+-transporting ATPase, c chain COP00_04050 PF01238 Phosphomannose isomerase type I COP00_04060 PF05043 Mga helix-turn-helix domain COP00_04060 PF08279 HTH domain COP00_04060 PF00874 PRD domain COP00_04060 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 COP00_04065 PF02683 Cytochrome C biogenesis protein transmembrane region COP00_04070 PF12823 Domain of unknown function (DUF3817) COP00_04075 PF02525 Flavodoxin-like fold COP00_04080 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain COP00_04080 PF02777 Iron/manganese superoxide dismutases, C-terminal domain COP00_04095 PF00005 ABC transporter COP00_04100 PF00392 Bacterial regulatory proteins, gntR family COP00_04115 PF00440 Bacterial regulatory proteins, tetR family COP00_04125 PF06800 Sugar transport protein COP00_04135 PF02638 Glycosyl hydrolase-like 10 COP00_04145 PF04055 Radical SAM superfamily COP00_04150 PF01228 Glycine radical COP00_04150 PF02901 Pyruvate formate lyase-like COP00_04170 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family COP00_04175 PF07992 Pyridine nucleotide-disulphide oxidoreductase COP00_04180 PF07849 Protein of unknown function (DUF1641) COP00_04190 PF12728 Helix-turn-helix domain COP00_04200 PF16177 Acetyl-coenzyme A synthetase N-terminus COP00_04200 PF13193 AMP-binding enzyme C-terminal domain COP00_04200 PF00501 AMP-binding enzyme COP00_04205 PF01039 Carboxyl transferase domain COP00_04210 PF00378 Enoyl-CoA hydratase/isomerase COP00_04215 PF00682 HMGL-like COP00_04220 PF00364 Biotin-requiring enzyme COP00_04225 PF02785 Biotin carboxylase C-terminal domain COP00_04225 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain COP00_04225 PF00289 Biotin carboxylase, N-terminal domain COP00_04230 PF13193 AMP-binding enzyme C-terminal domain COP00_04230 PF00501 AMP-binding enzyme COP00_04235 PF00441 Acyl-CoA dehydrogenase, C-terminal domain COP00_04235 PF02770 Acyl-CoA dehydrogenase, middle domain COP00_04235 PF02771 Acyl-CoA dehydrogenase, N-terminal domain COP00_04240 PF02525 Flavodoxin-like fold COP00_04245 PF01638 HxlR-like helix-turn-helix COP00_04275 PF14748 Pyrroline-5-carboxylate reductase dimerisation COP00_04275 PF03807 NADP oxidoreductase coenzyme F420-dependent COP00_04280 PF04239 Protein of unknown function (DUF421) COP00_04290 PF01507 Phosphoadenosine phosphosulfate reductase family COP00_04295 PF02679 (2R)-phospho-3-sulfolactate synthase (ComA) COP00_04300 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 COP00_04305 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain COP00_04305 PF13378 Enolase C-terminal domain-like COP00_04310 PF07690 Major Facilitator Superfamily COP00_04315 PF00535 Glycosyl transferase family 2 COP00_04330 PF07992 Pyridine nucleotide-disulphide oxidoreductase COP00_04330 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster COP00_04335 PF00310 Glutamine amidotransferases class-II COP00_04335 PF01493 GXGXG motif COP00_04335 PF04898 Glutamate synthase central domain COP00_04335 PF01645 Conserved region in glutamate synthase COP00_04360 PF00664 ABC transporter transmembrane region COP00_04360 PF00005 ABC transporter COP00_04365 PF00664 ABC transporter transmembrane region COP00_04365 PF00005 ABC transporter COP00_04370 PF09423 PhoD-like phosphatase COP00_04370 PF16655 PhoD-like phosphatase, N-terminal domain COP00_04375 PF00067 Cytochrome P450 COP00_04380 PF00106 short chain dehydrogenase COP00_04385 PF07690 Major Facilitator Superfamily COP00_04390 PF04879 Molybdopterin oxidoreductase Fe4S4 domain COP00_04390 PF00384 Molybdopterin oxidoreductase COP00_04390 PF01568 Molydopterin dinucleotide binding domain COP00_04395 PF00700 Bacterial flagellin C-terminal helical region COP00_04395 PF00669 Bacterial flagellin N-terminal helical region COP00_04400 PF01047 MarR family COP00_04405 PF07690 Major Facilitator Superfamily COP00_04410 PF03845 Spore germination protein COP00_04415 PF05504 Spore germination B3/ GerAC like, C-terminal COP00_04420 PF03845 Spore germination protein COP00_04425 PF03845 Spore germination protein COP00_04430 PF03323 Bacillus/Clostridium GerA spore germination protein COP00_04445 PF00753 Metallo-beta-lactamase superfamily COP00_04460 PF00672 HAMP domain COP00_04460 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain COP00_04460 PF02743 Cache domain COP00_04465 PF01588 Putative tRNA binding domain COP00_04470 PF00082 Subtilase family COP00_04475 PF17329 Family of unknown function (DUF5367) COP00_04480 PF17932 Tetracyclin repressor-like, C-terminal domain COP00_04480 PF00440 Bacterial regulatory proteins, tetR family COP00_04490 PF13305 Tetracyclin repressor-like, C-terminal domain COP00_04490 PF00440 Bacterial regulatory proteins, tetR family COP00_04495 PF00753 Metallo-beta-lactamase superfamily COP00_04500 PF06445 GyrI-like small molecule binding domain COP00_04515 PF08279 HTH domain COP00_04515 PF13280 WYL domain COP00_04525 PF01022 Bacterial regulatory protein, arsR family COP00_04535 PF00324 Amino acid permease COP00_04545 PF02719 Polysaccharide biosynthesis protein COP00_04565 PF04238 Protein of unknown function (DUF420) COP00_04575 PF17676 LD-carboxypeptidase C-terminal domain COP00_04575 PF02016 LD-carboxypeptidase N-terminal domain COP00_04580 PF13302 Acetyltransferase (GNAT) domain COP00_04595 PF06725 3D domain COP00_04595 PF01476 LysM domain COP00_04600 PF16124 RecQ zinc-binding COP00_04600 PF00271 Helicase conserved C-terminal domain COP00_04600 PF00570 HRDC domain COP00_04600 PF00270 DEAD/DEAH box helicase COP00_04600 PF09382 RQC domain COP00_04610 PF14070 Putative motility protein COP00_04660 PF02368 Bacterial Ig-like domain (group 2) COP00_04680 PF05368 NmrA-like family COP00_04700 PF00106 short chain dehydrogenase COP00_04705 PF00805 Pentapeptide repeats (8 copies) COP00_04715 PF11122 Inner spore coat protein D COP00_04720 PF01810 LysE type translocator COP00_04725 PF00253 Ribosomal protein S14p/S29e COP00_04735 PF00975 Thioesterase domain COP00_04735 PF13193 AMP-binding enzyme C-terminal domain COP00_04735 PF00550 Phosphopantetheine attachment site COP00_04735 PF00501 AMP-binding enzyme COP00_04735 PF00668 Condensation domain COP00_04740 PF13193 AMP-binding enzyme C-terminal domain COP00_04740 PF00668 Condensation domain COP00_04740 PF00550 Phosphopantetheine attachment site COP00_04740 PF00975 Thioesterase domain COP00_04740 PF00501 AMP-binding enzyme COP00_04745 PF00550 Phosphopantetheine attachment site COP00_04745 PF13193 AMP-binding enzyme C-terminal domain COP00_04745 PF00501 AMP-binding enzyme COP00_04745 PF00975 Thioesterase domain COP00_04745 PF00668 Condensation domain COP00_04750 PF00668 Condensation domain COP00_04750 PF00550 Phosphopantetheine attachment site COP00_04750 PF13193 AMP-binding enzyme C-terminal domain COP00_04750 PF00501 AMP-binding enzyme COP00_04750 PF00975 Thioesterase domain COP00_04755 PF00698 Acyl transferase domain COP00_04755 PF16197 Ketoacyl-synthetase C-terminal extension COP00_04755 PF14765 Polyketide synthase dehydratase COP00_04755 PF02801 Beta-ketoacyl synthase, C-terminal domain COP00_04755 PF08659 KR domain COP00_04755 PF00550 Phosphopantetheine attachment site COP00_04755 PF00109 Beta-ketoacyl synthase, N-terminal domain COP00_04775 PF10710 Protein of unknown function (DUF2512) COP00_04785 PF05163 DinB family COP00_04790 PF02525 Flavodoxin-like fold COP00_04795 PF01258 Prokaryotic dksA/traR C4-type zinc finger COP00_04800 PF00190 Cupin COP00_04820 PF10070 Uncharacterized protein conserved in bacteria (DUF2309) COP00_04825 PF00361 Proton-conducting membrane transporter COP00_04825 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus COP00_04830 PF10057 Uncharacterized conserved protein (DUF2294) COP00_04835 PF08000 Bacterial PH domain COP00_04850 PF00171 Aldehyde dehydrogenase family COP00_04870 PF00248 Aldo/keto reductase family COP00_04875 PF01479 S4 domain COP00_04875 PF00579 tRNA synthetases class I (W and Y) COP00_04880 PF01047 MarR family COP00_04885 PF13243 Squalene-hopene cyclase C-terminal domain COP00_04885 PF13249 Squalene-hopene cyclase N-terminal domain COP00_04890 PF02777 Iron/manganese superoxide dismutases, C-terminal domain COP00_04890 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain COP00_04895 PF00209 Sodium:neurotransmitter symporter family COP00_04900 PF01758 Sodium Bile acid symporter family COP00_04905 PF00364 Biotin-requiring enzyme COP00_04905 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) COP00_04905 PF02817 e3 binding domain COP00_04910 PF16870 2-oxoglutarate dehydrogenase C-terminal COP00_04910 PF02779 Transketolase, pyrimidine binding domain COP00_04910 PF00676 Dehydrogenase E1 component COP00_04915 PF00092 von Willebrand factor type A domain COP00_04920 PF07728 AAA domain (dynein-related subfamily) COP00_04925 PF13627 Prokaryotic lipoprotein-attachment site COP00_04925 PF00080 Copper/zinc superoxide dismutase (SODC) COP00_04930 PF01476 LysM domain COP00_04930 PF00877 NlpC/P60 family COP00_04935 PF01554 MatE COP00_04940 PF02585 GlcNAc-PI de-N-acetylase COP00_04945 PF08830 Protein of unknown function (DUF1806) COP00_04955 PF00892 EamA-like transporter family COP00_04965 PF03330 Lytic transglycolase COP00_04980 PF01638 HxlR-like helix-turn-helix COP00_04985 PF00881 Nitroreductase family COP00_04990 PF01738 Dienelactone hydrolase family COP00_04995 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily COP00_05000 PF11755 Protein of unknown function (DUF3311) COP00_05005 PF00474 Sodium:solute symporter family COP00_05010 PF17820 PDZ domain COP00_05010 PF01471 Putative peptidoglycan binding domain COP00_05010 PF03572 Peptidase family S41 COP00_05015 PF08241 Methyltransferase domain COP00_05025 PF02557 D-alanyl-D-alanine carboxypeptidase COP00_05030 PF01048 Phosphorylase superfamily COP00_05035 PF03773 Predicted permease COP00_05050 PF14191 YodL-like COP00_05055 PF01569 PAP2 superfamily COP00_05060 PF14162 YozD-like protein COP00_05075 PF06855 YozE SAM-like fold COP00_05080 PF14122 YokU-like protein, putative antitoxin COP00_05085 PF12544 Lysine-2,3-aminomutase COP00_05090 PF00583 Acetyltransferase (GNAT) family COP00_05095 PF01546 Peptidase family M20/M25/M40 COP00_05095 PF07687 Peptidase dimerisation domain COP00_05100 PF01144 Coenzyme A transferase COP00_05105 PF01144 Coenzyme A transferase COP00_05110 PF00202 Aminotransferase class-III COP00_05120 PF09680 Family of unknown function COP00_05125 PF00583 Acetyltransferase (GNAT) family COP00_05130 PF01641 SelR domain COP00_05135 PF01625 Peptide methionine sulfoxide reductase COP00_05140 PF01047 MarR family COP00_05150 PF01554 MatE COP00_05160 PF17431 Uncharacterized YmpT-like COP00_05165 PF09911 Uncharacterized protein conserved in bacteria (DUF2140) COP00_05175 PF02630 SCO1/SenC COP00_05180 PF02645 Uncharacterised protein, DegV family COG1307 COP00_05185 PF10751 Protein of unknown function (DUF2535) COP00_05190 PF00585 C-terminal regulatory domain of Threonine dehydratase COP00_05190 PF00291 Pyridoxal-phosphate dependent enzyme COP00_05195 PF00158 Sigma-54 interaction domain COP00_05195 PF08461 Ribonuclease R winged-helix domain COP00_05200 PF03006 Haemolysin-III related COP00_05210 PF00186 Dihydrofolate reductase COP00_05215 PF04608 Phosphatidylglycerophosphatase A COP00_05220 PF14005 YpjP-like protein COP00_05225 PF08502 LeuA allosteric (dimerisation) domain COP00_05225 PF00682 HMGL-like COP00_05230 PF04445 Putative SAM-dependent methyltransferase COP00_05235 PF06491 Disulphide isomerase COP00_05240 PF00920 Dehydratase family COP00_05245 PF08712 Scaffold protein Nfu/NifU N terminal COP00_05245 PF13769 Virulence factor COP00_05250 PF01966 HD domain COP00_05255 PF00255 Glutathione peroxidase COP00_05260 PF01268 Formate--tetrahydrofolate ligase COP00_05265 PF04204 Homoserine O-succinyltransferase COP00_05270 PF00534 Glycosyl transferases group 1 COP00_05270 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase COP00_05280 PF00313 'Cold-shock' DNA-binding domain COP00_05290 PF10819 Protein of unknown function (DUF2564) COP00_05295 PF10782 Zinc-finger COP00_05300 PF13456 Reverse transcriptase-like COP00_05305 PF02592 Putative vitamin uptake transporter COP00_05310 PF13456 Reverse transcriptase-like COP00_05320 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain COP00_05320 PF01367 5'-3' exonuclease, C-terminal SAM fold COP00_05330 PF10752 Protein of unknown function (DUF2533) COP00_05345 PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family COP00_05350 PF00195 Chalcone and stilbene synthases, N-terminal domain COP00_05350 PF02797 Chalcone and stilbene synthases, C-terminal domain COP00_05360 PF00860 Permease family COP00_05365 PF00156 Phosphoribosyl transferase domain COP00_05370 PF02074 Carboxypeptidase Taq (M32) metallopeptidase COP00_05375 PF13307 Helicase C-terminal domain COP00_05390 PF01170 Putative RNA methylase family UPF0020 COP00_05390 PF02926 THUMP domain COP00_05400 PF05103 DivIVA protein COP00_05405 PF06908 YspA SLOG family COP00_05410 PF11122 Inner spore coat protein D COP00_05415 PF13482 RNase_H superfamily COP00_05420 PF09369 Domain of unknown function (DUF1998) COP00_05420 PF00270 DEAD/DEAH box helicase COP00_05420 PF00271 Helicase conserved C-terminal domain COP00_05425 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 COP00_05435 PF14179 YppG-like protein COP00_05440 PF14178 YppF-like protein COP00_05445 PF08807 Bacterial domain of unknown function (DUF1798) COP00_05460 PF10720 Protein of unknown function (DUF2515) COP00_05465 PF03838 Recombination protein U COP00_05470 PF00912 Transglycosylase COP00_05470 PF00905 Penicillin binding protein transpeptidase domain COP00_05480 PF00730 HhH-GPD superfamily base excision DNA repair protein COP00_05480 PF10576 Iron-sulfur binding domain of endonuclease III COP00_05480 PF00633 Helix-hairpin-helix motif COP00_05485 PF07261 Replication initiation and membrane attachment COP00_05490 PF00152 tRNA synthetases class II (D, K and N) COP00_05490 PF01336 OB-fold nucleic acid binding domain COP00_05495 PF00155 Aminotransferase class I and II COP00_05500 PF03413 Peptidase propeptide and YPEB domain COP00_05500 PF17881 Domain of unknown function (DUF5590) COP00_05505 PF14084 Protein of unknown function (DUF4264) COP00_05510 PF04851 Type III restriction enzyme, res subunit COP00_05510 PF00929 Exonuclease COP00_05510 PF13307 Helicase C-terminal domain COP00_05515 PF02261 Aspartate decarboxylase COP00_05520 PF02569 Pantoate-beta-alanine ligase COP00_05525 PF02548 Ketopantoate hydroxymethyltransferase COP00_05530 PF02237 Biotin protein ligase C terminal domain COP00_05530 PF08279 HTH domain COP00_05530 PF03099 Biotin/lipoate A/B protein ligase family COP00_05535 PF12627 Probable RNA and SrmB- binding site of polymerase A COP00_05535 PF01743 Poly A polymerase head domain COP00_05535 PF13735 tRNA nucleotidyltransferase domain 2 putative COP00_05540 PF00534 Glycosyl transferases group 1 COP00_05540 PF13439 Glycosyltransferase Family 4 COP00_05545 PF02585 GlcNAc-PI de-N-acetylase COP00_05550 PF02142 MGS-like domain COP00_05555 PF05173 Dihydrodipicolinate reductase, C-terminus COP00_05555 PF01113 Dihydrodipicolinate reductase, N-terminus COP00_05560 PF03819 MazG nucleotide pyrophosphohydrolase domain COP00_05565 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) COP00_05565 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 COP00_05570 PF09577 Sporulation protein YpjB (SpoYpjB) COP00_05575 PF07187 Protein of unknown function (DUF1405) COP00_05580 PF00032 Cytochrome b(C-terminal)/b6/petD COP00_05580 PF13442 Cytochrome C oxidase, cbb3-type, subunit III COP00_05585 PF00033 Cytochrome b/b6/petB COP00_05590 PF00355 Rieske [2Fe-2S] domain COP00_05595 PF10673 Protein of unknown function (DUF2487) COP00_05600 PF08858 IDEAL domain COP00_05600 PF08864 UPF0302 domain COP00_05610 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) COP00_05615 PF02153 Prephenate dehydrogenase COP00_05615 PF01842 ACT domain COP00_05620 PF00155 Aminotransferase class I and II COP00_05625 PF00290 Tryptophan synthase alpha chain COP00_05630 PF00291 Pyridoxal-phosphate dependent enzyme COP00_05635 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase COP00_05640 PF00218 Indole-3-glycerol phosphate synthase COP00_05645 PF02885 Glycosyl transferase family, helical bundle domain COP00_05645 PF00591 Glycosyl transferase family, a/b domain COP00_05650 PF00425 chorismate binding enzyme COP00_05650 PF04715 Anthranilate synthase component I, N terminal region COP00_05655 PF07736 Chorismate mutase type I COP00_05660 PF01761 3-dehydroquinate synthase COP00_05665 PF01264 Chorismate synthase COP00_05670 PF01739 CheR methyltransferase, SAM binding domain COP00_05670 PF03705 CheR methyltransferase, all-alpha domain COP00_05675 PF00334 Nucleoside diphosphate kinase COP00_05680 PF00348 Polyprenyl synthetase COP00_05685 PF01209 ubiE/COQ5 methyltransferase family COP00_05690 PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 COP00_05695 PF02081 Tryptophan RNA-binding attenuator protein COP00_05700 PF01227 GTP cyclohydrolase I COP00_05705 PF00216 Bacterial DNA-binding protein COP00_05710 PF09547 Stage IV sporulation protein A (spore_IV_A) COP00_05720 PF10966 Protein of unknown function (DUF2768) COP00_05730 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus COP00_05730 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus COP00_05735 PF01926 50S ribosome-binding GTPase COP00_05735 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal COP00_05745 PF14045 YIEGIA protein COP00_05760 PF01070 FMN-dependent dehydrogenase COP00_05765 PF00575 S1 RNA binding domain COP00_05770 PF02224 Cytidylate kinase COP00_05775 PF17313 Family of unknown function (DUF5359) COP00_05780 PF03413 Peptidase propeptide and YPEB domain COP00_05780 PF14620 YpeB sporulation COP00_05785 PF07486 Cell Wall Hydrolase COP00_05785 PF01471 Putative peptidoglycan binding domain COP00_05790 PF13367 PrsW family intramembrane metalloprotease COP00_05795 PF00710 Asparaginase, N-terminal COP00_05795 PF17763 Glutaminase/Asparaginase C-terminal domain COP00_05805 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase COP00_05805 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain COP00_05810 PF05389 Negative regulator of genetic competence (MecA) COP00_05815 PF00149 Calcineurin-like phosphoesterase COP00_05820 PF10864 Protein of unknown function (DUF2663) COP00_05825 PF01476 LysM domain COP00_05830 PF02517 CPBP intramembrane metalloprotease COP00_05835 PF00271 Helicase conserved C-terminal domain COP00_05835 PF00270 DEAD/DEAH box helicase COP00_05840 PF14493 Helix-turn-helix domain COP00_05850 PF12822 ECF transporter, substrate-specific component COP00_05855 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain COP00_05855 PF01842 ACT domain COP00_05855 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain COP00_05860 PF01551 Peptidase family M23 COP00_05860 PF04225 Opacity-associated protein A LysM-like domain COP00_05870 PF08281 Sigma-70, region 4 COP00_05870 PF04542 Sigma-70 region 2 COP00_05890 PF00512 His Kinase A (phospho-acceptor) domain COP00_05890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase COP00_05895 PF00072 Response regulator receiver domain COP00_05895 PF00486 Transcriptional regulatory protein, C terminal COP00_05910 PF01578 Cytochrome C assembly protein COP00_05915 PF05140 ResB-like family COP00_05920 PF00578 AhpC/TSA family COP00_05925 PF01479 S4 domain COP00_05925 PF00849 RNA pseudouridylate synthase COP00_05930 PF07670 Nucleoside recognition COP00_05935 PF07670 Nucleoside recognition COP00_05940 PF00768 D-alanyl-D-alanine carboxypeptidase COP00_05940 PF07943 Penicillin-binding protein 5, C-terminal domain COP00_05945 PF13047 Protein of unknown function (DUF3907) COP00_05960 PF03745 Domain of unknown function (DUF309) COP00_05965 PF00583 Acetyltransferase (GNAT) family COP00_05975 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase COP00_05975 PF00925 GTP cyclohydrolase II COP00_05980 PF00677 Lumazine binding domain COP00_05985 PF01872 RibD C-terminal domain COP00_05985 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region COP00_05995 PF00011 Hsp20/alpha crystallin family COP00_06005 PF18801 response regulator aspartate phosphatase H, N terminal COP00_06010 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD COP00_06015 PF06207 Protein of unknown function (DUF1002) COP00_06020 PF05908 Poly-gamma-glutamate hydrolase COP00_06030 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain COP00_06030 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain COP00_06040 PF03323 Bacillus/Clostridium GerA spore germination protein COP00_06045 PF14097 Stage V sporulation protein AE1 COP00_06050 PF03862 SpoVAC/SpoVAEB sporulation membrane protein COP00_06055 PF07451 Stage V sporulation protein AD (SpoVAD) COP00_06060 PF03862 SpoVAC/SpoVAEB sporulation membrane protein COP00_06065 PF13782 Stage V sporulation protein AB COP00_06070 PF12164 Stage V sporulation protein AA COP00_06075 PF04545 Sigma-70, region 4 COP00_06075 PF04542 Sigma-70 region 2 COP00_06075 PF04539 Sigma-70 region 3 COP00_06080 PF13581 Histidine kinase-like ATPase domain COP00_06085 PF01740 STAS domain COP00_06090 PF07943 Penicillin-binding protein 5, C-terminal domain COP00_06090 PF00768 D-alanyl-D-alanine carboxypeptidase COP00_06095 PF01048 Phosphorylase superfamily COP00_06100 PF01676 Metalloenzyme superfamily COP00_06105 PF02899 Phage integrase, N-terminal SAM-like domain COP00_06105 PF00589 Phage integrase family COP00_06110 PF14004 Protein of unknown function (DUF4227) COP00_06115 PF01475 Ferric uptake regulator family COP00_06120 PF01944 Stage II sporulation protein M COP00_06125 PF02378 Phosphotransferase system, EIIC COP00_06130 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit COP00_06140 PF05711 Macrocin-O-methyltransferase (TylF) COP00_06145 PF13673 Acetyltransferase (GNAT) domain COP00_06155 PF00293 NUDIX domain COP00_06160 PF13072 Mother cell inhibitor of FtsZ COP00_06165 PF00440 Bacterial regulatory proteins, tetR family COP00_06170 PF13564 DoxX-like family COP00_06175 PF00248 Aldo/keto reductase family COP00_06180 PF07690 Major Facilitator Superfamily COP00_06185 PF00155 Aminotransferase class I and II COP00_06185 PF00392 Bacterial regulatory proteins, gntR family COP00_06190 PF13229 Right handed beta helix region COP00_06210 PF12146 Serine aminopeptidase, S33 COP00_06215 PF10827 Protein of unknown function (DUF2552) COP00_06220 PF01521 Iron-sulphur cluster biosynthesis COP00_06230 PF13673 Acetyltransferase (GNAT) domain COP00_06230 PF04229 GrpB protein COP00_06240 PF00583 Acetyltransferase (GNAT) family COP00_06250 PF01674 Lipase (class 2) COP00_06270 PF08863 YolD-like protein COP00_06275 PF11799 impB/mucB/samB family C-terminal domain COP00_06275 PF11798 IMS family HHH motif COP00_06275 PF00817 impB/mucB/samB family COP00_06285 PF14164 YqzH-like protein COP00_06290 PF07690 Major Facilitator Superfamily COP00_06300 PF00485 Phosphoribulokinase / Uridine kinase family COP00_06310 PF00005 ABC transporter COP00_06325 PF00975 Thioesterase domain COP00_06325 PF13193 AMP-binding enzyme C-terminal domain COP00_06325 PF00550 Phosphopantetheine attachment site COP00_06325 PF00501 AMP-binding enzyme COP00_06325 PF00668 Condensation domain COP00_06330 PF00975 Thioesterase domain COP00_06330 PF13193 AMP-binding enzyme C-terminal domain COP00_06330 PF00668 Condensation domain COP00_06330 PF00501 AMP-binding enzyme COP00_06330 PF00550 Phosphopantetheine attachment site COP00_06340 PF05908 Poly-gamma-glutamate hydrolase COP00_06345 PF00106 short chain dehydrogenase COP00_06350 PF00753 Metallo-beta-lactamase superfamily COP00_06355 PF03807 NADP oxidoreductase coenzyme F420-dependent COP00_06355 PF14748 Pyrroline-5-carboxylate reductase dimerisation COP00_06360 PF01546 Peptidase family M20/M25/M40 COP00_06365 PF00724 NADH:flavin oxidoreductase / NADH oxidase family COP00_06370 PF12146 Serine aminopeptidase, S33 COP00_06375 PF00471 Ribosomal protein L33 COP00_06380 PF00753 Metallo-beta-lactamase superfamily COP00_06380 PF12706 Beta-lactamase superfamily domain COP00_06385 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain COP00_06385 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain COP00_06390 PF07702 UTRA domain COP00_06390 PF00392 Bacterial regulatory proteins, gntR family COP00_06395 PF00232 Glycosyl hydrolase family 1 COP00_06400 PF02378 Phosphotransferase system, EIIC COP00_06405 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit COP00_06410 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit COP00_06415 PF00245 Alkaline phosphatase COP00_06425 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain COP00_06425 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase COP00_06430 PF11798 IMS family HHH motif COP00_06430 PF11799 impB/mucB/samB family C-terminal domain COP00_06430 PF00817 impB/mucB/samB family COP00_06440 PF02096 60Kd inner membrane protein COP00_06450 PF01546 Peptidase family M20/M25/M40 COP00_06450 PF07687 Peptidase dimerisation domain COP00_06455 PF01039 Carboxyl transferase domain COP00_06460 PF06081 Aromatic acid exporter family member 1 COP00_06460 PF11728 Putative aromatic acid exporter C-terminal domain COP00_06465 PF00005 ABC transporter COP00_06470 PF00528 Binding-protein-dependent transport system inner membrane component COP00_06475 PF00497 Bacterial extracellular solute-binding proteins, family 3 COP00_06480 PF06491 Disulphide isomerase COP00_06485 PF00781 Diacylglycerol kinase catalytic domain COP00_06490 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) COP00_06490 PF00364 Biotin-requiring enzyme COP00_06490 PF02817 e3 binding domain COP00_06495 PF02780 Transketolase, C-terminal domain COP00_06495 PF02779 Transketolase, pyrimidine binding domain COP00_06500 PF00676 Dehydrogenase E1 component COP00_06505 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain COP00_06505 PF07992 Pyridine nucleotide-disulphide oxidoreductase COP00_06510 PF00871 Acetokinase family COP00_06515 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase COP00_06515 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain COP00_06520 PF01515 Phosphate acetyl/butaryl transferase COP00_06525 PF00989 PAS fold COP00_06525 PF00158 Sigma-54 interaction domain COP00_06525 PF02954 Bacterial regulatory protein, Fis family COP00_06530 PF11118 Protein of unknown function (DUF2627) COP00_06535 PF03009 Glycerophosphoryl diester phosphodiesterase family COP00_06540 PF04072 Leucine carboxyl methyltransferase COP00_06555 PF00072 Response regulator receiver domain COP00_06555 PF08769 Sporulation initiation factor Spo0A C terminal COP00_06560 PF05580 SpoIVB peptidase S55 COP00_06560 PF17820 PDZ domain COP00_06565 PF13476 AAA domain COP00_06570 PF01316 Arginine repressor, DNA binding domain COP00_06570 PF02863 Arginine repressor, C-terminal domain COP00_06575 PF01479 S4 domain COP00_06575 PF01728 FtsJ-like methyltransferase COP00_06580 PF13292 1-deoxy-D-xylulose-5-phosphate synthase COP00_06580 PF02779 Transketolase, pyrimidine binding domain COP00_06580 PF02780 Transketolase, C-terminal domain COP00_06585 PF00348 Polyprenyl synthetase COP00_06590 PF02609 Exonuclease VII small subunit COP00_06595 PF02601 Exonuclease VII, large subunit COP00_06595 PF13742 OB-fold nucleic acid binding domain COP00_06600 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain COP00_06600 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain COP00_06605 PF01029 NusB family COP00_06610 PF03780 Asp23 family, cell envelope-related function COP00_06615 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain COP00_06615 PF00289 Biotin carboxylase, N-terminal domain COP00_06615 PF02785 Biotin carboxylase C-terminal domain COP00_06620 PF00364 Biotin-requiring enzyme COP00_06625 PF12685 SpoIIIAH-like protein COP00_06635 PF09581 Stage III sporulation protein AF (Spore_III_AF) COP00_06640 PF09546 Stage III sporulation protein AE (spore_III_AE) COP00_06645 PF06686 Stage III sporulation protein AC/AD protein family COP00_06650 PF06686 Stage III sporulation protein AC/AD protein family COP00_06655 PF09548 Stage III sporulation protein AB (spore_III_AB) COP00_06665 PF10942 Protein of unknown function (DUF2619) COP00_06670 PF09285 Elongation factor P, C-terminal COP00_06670 PF08207 Elongation factor P (EF-P) KOW-like domain COP00_06670 PF01132 Elongation factor P (EF-P) OB domain COP00_06675 PF01321 Creatinase/Prolidase N-terminal domain COP00_06675 PF00557 Metallopeptidase family M24 COP00_06680 PF01220 Dehydroquinase class II COP00_06685 PF11085 Conserved membrane protein YqhR COP00_06690 PF07136 Protein of unknown function (DUF1385) COP00_06700 PF01734 Patatin-like phospholipase COP00_06705 PF02742 Iron dependent repressor, metal binding and dimerisation domain COP00_06705 PF01325 Iron dependent repressor, N-terminal DNA binding domain COP00_06710 PF03099 Biotin/lipoate A/B protein ligase family COP00_06715 PF00581 Rhodanese-like domain COP00_06720 PF02347 Glycine cleavage system P-protein COP00_06725 PF02347 Glycine cleavage system P-protein COP00_06730 PF01571 Aminomethyltransferase folate-binding domain COP00_06730 PF08669 Glycine cleavage T-protein C-terminal barrel domain COP00_06735 PF00176 SNF2 family N-terminal domain COP00_06735 PF00271 Helicase conserved C-terminal domain COP00_06740 PF11079 Bacterial protein YqhG of unknown function COP00_06745 PF08671 Anti-repressor SinI COP00_06750 PF08671 Anti-repressor SinI COP00_06750 PF01381 Helix-turn-helix COP00_06755 PF12389 Camelysin metallo-endopeptidase COP00_06770 PF13028 Protein of unknown function (DUF3889) COP00_06775 PF14038 YqzE-like protein COP00_06780 PF14173 ComG operon protein 7 COP00_06785 PF15980 Putative Competence protein ComGF COP00_06795 PF07963 Prokaryotic N-terminal methylation motif COP00_06800 PF07963 Prokaryotic N-terminal methylation motif COP00_06805 PF00482 Type II secretion system (T2SS), protein F COP00_06810 PF00437 Type II/IV secretion system protein COP00_06815 PF14361 RsbT co-antagonist protein rsbRD N-terminal domain COP00_06815 PF01740 STAS domain COP00_06825 PF03960 ArsC family COP00_06830 PF11117 Protein of unknown function (DUF2626) COP00_06835 PF00753 Metallo-beta-lactamase superfamily COP00_06840 PF10958 Protein of unknown function (DUF2759) COP00_06845 PF01910 Thiamine-binding protein COP00_06855 PF00246 Zinc carboxypeptidase COP00_06885 PF04688 SPP1 phage holin COP00_06890 PF10779 Haemolysin XhlA COP00_06930 PF01497 Periplasmic binding protein COP00_06940 PF01226 Formate/nitrite transporter COP00_06955 PF00884 Sulfatase COP00_06960 PF00480 ROK family COP00_06965 PF06014 Bacterial protein of unknown function (DUF910) COP00_06970 PF03323 Bacillus/Clostridium GerA spore germination protein COP00_06975 PF01694 Rhomboid family COP00_06985 PF01812 5-formyltetrahydrofolate cyclo-ligase family COP00_06990 PF00471 Ribosomal protein L33 COP00_07015 PF00005 ABC transporter COP00_07020 PF00005 ABC transporter COP00_07025 PF00528 Binding-protein-dependent transport system inner membrane component COP00_07030 PF00528 Binding-protein-dependent transport system inner membrane component COP00_07035 PF12849 PBP superfamily domain COP00_07045 PF07690 Major Facilitator Superfamily COP00_07050 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain COP00_07050 PF02777 Iron/manganese superoxide dismutases, C-terminal domain COP00_07055 PF04306 Protein of unknown function (DUF456) COP00_07060 PF06691 Protein of unknown function (DUF1189) COP00_07070 PF04551 GcpE protein COP00_07085 PF01475 Ferric uptake regulator family COP00_07090 PF00950 ABC 3 transport family COP00_07095 PF00005 ABC transporter COP00_07100 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 COP00_07100 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) COP00_07105 PF11116 Protein of unknown function (DUF2624) COP00_07110 PF01261 Xylose isomerase-like TIM barrel COP00_07125 PF02401 LytB protein COP00_07130 PF01784 NIF3 (NGG1p interacting factor 3) COP00_07135 PF04816 tRNA (adenine(22)-N(1))-methyltransferase COP00_07140 PF04493 Endonuclease V COP00_07170 PF13442 Cytochrome C oxidase, cbb3-type, subunit III COP00_07175 PF03979 Sigma-70 factor, region 1.1 COP00_07175 PF00140 Sigma-70 factor, region 1.2 COP00_07175 PF04542 Sigma-70 region 2 COP00_07175 PF04545 Sigma-70, region 4 COP00_07175 PF04539 Sigma-70 region 3 COP00_07180 PF10410 DnaB-helicase binding domain of primase COP00_07180 PF08275 DNA primase catalytic core, N-terminal domain COP00_07180 PF01807 CHC2 zinc finger COP00_07185 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 COP00_07190 PF03618 Kinase/pyrophosphorylase COP00_07195 PF08279 HTH domain COP00_07195 PF00571 CBS domain COP00_07200 PF02092 Glycyl-tRNA synthetase beta subunit COP00_07205 PF02091 Glycyl-tRNA synthetase alpha subunit COP00_07210 PF11967 Recombination protein O N terminal COP00_07210 PF02565 Recombination protein O C terminal COP00_07215 PF14006 YqzL-like protein COP00_07220 PF07650 KH domain COP00_07220 PF01926 50S ribosome-binding GTPase COP00_07230 PF01219 Prokaryotic diacylglycerol kinase COP00_07235 PF02130 Uncharacterized protein family UPF0054 COP00_07240 PF07697 7TM-HD extracellular COP00_07240 PF01966 HD domain COP00_07240 PF07698 7TM receptor with intracellular HD hydrolase COP00_07245 PF02562 PhoH-like protein COP00_07250 PF06898 Putative stage IV sporulation protein YqfD COP00_07255 PF07873 YabP family COP00_07265 PF12127 SigmaW regulon antibacterial COP00_07270 PF01957 NfeD-like C-terminal, partner-binding COP00_07270 PF01972 Serine dehydrogenase proteinase COP00_07275 PF09424 Yqey-like protein COP00_07280 PF01165 Ribosomal protein S21 COP00_07285 PF02690 Na+/Pi-cotransporter COP00_07290 PF00583 Acetyltransferase (GNAT) family COP00_07295 PF04055 Radical SAM superfamily COP00_07295 PF01938 TRAM domain COP00_07295 PF00919 Uncharacterized protein family UPF0004 COP00_07300 PF04452 RNA methyltransferase COP00_07310 PF00684 DnaJ central domain COP00_07310 PF01556 DnaJ C terminal domain COP00_07310 PF00226 DnaJ domain COP00_07315 PF00012 Hsp70 protein COP00_07320 PF01025 GrpE COP00_07325 PF01628 HrcA protein C terminal domain COP00_07330 PF06969 HemN C-terminal domain COP00_07330 PF04055 Radical SAM superfamily COP00_07335 PF00009 Elongation factor Tu GTP binding domain COP00_07335 PF03144 Elongation factor Tu domain 2 COP00_07335 PF06421 GTP-binding protein LepA C-terminus COP00_07335 PF00679 Elongation factor G C-terminus COP00_07340 PF12438 Protein of unknown function (DUF3679) COP00_07345 PF07454 Stage II sporulation protein P (SpoIIP) COP00_07350 PF03418 Germination protease COP00_07355 PF01649 Ribosomal protein S20 COP00_07360 PF06144 DNA polymerase III, delta subunit COP00_07365 PF14141 YqzM-like protein COP00_07370 PF13567 Domain of unknown function (DUF4131) COP00_07370 PF00753 Metallo-beta-lactamase superfamily COP00_07370 PF03772 Competence protein COP00_07375 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region COP00_07380 PF10531 SLBB domain COP00_07385 PF14748 Pyrroline-5-carboxylate reductase dimerisation COP00_07385 PF03807 NADP oxidoreductase coenzyme F420-dependent COP00_07390 PF13649 Methyltransferase domain COP00_07400 PF01966 HD domain COP00_07405 PF01467 Cytidylyltransferase-like COP00_07410 PF01985 CRS1 / YhbY (CRM) domain COP00_07415 PF18317 Shikimate 5'-dehydrogenase C-terminal domain COP00_07415 PF01488 Shikimate / quinate 5-dehydrogenase COP00_07415 PF08501 Shikimate dehydrogenase substrate binding domain COP00_07420 PF01926 50S ribosome-binding GTPase COP00_07430 PF08970 Sporulation inhibitor A COP00_07435 PF00657 GDSL-like Lipase/Acylhydrolase COP00_07445 PF10057 Uncharacterized conserved protein (DUF2294) COP00_07450 PF00384 Molybdopterin oxidoreductase COP00_07450 PF01568 Molydopterin dinucleotide binding domain COP00_07450 PF00037 4Fe-4S binding domain COP00_07450 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region COP00_07450 PF04879 Molybdopterin oxidoreductase Fe4S4 domain COP00_07465 PF04542 Sigma-70 region 2 COP00_07465 PF04545 Sigma-70, region 4 COP00_07475 PF00561 alpha/beta hydrolase fold COP00_07480 PF03466 LysR substrate binding domain COP00_07480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family COP00_07485 PF03060 Nitronate monooxygenase COP00_07495 PF01177 Asp/Glu/Hydantoin racemase COP00_07500 PF00107 Zinc-binding dehydrogenase COP00_07500 PF08240 Alcohol dehydrogenase GroES-like domain COP00_07520 PF06445 GyrI-like small molecule binding domain COP00_07520 PF13411 MerR HTH family regulatory protein COP00_07545 PF09346 SMI1 / KNR4 family (SUKH-1) COP00_07550 PF10676 Spore germination protein gerPA/gerPF COP00_07555 PF10676 Spore germination protein gerPA/gerPF COP00_07560 PF00011 Hsp20/alpha crystallin family COP00_07565 PF03176 MMPL family COP00_07570 PF00072 Response regulator receiver domain COP00_07570 PF00196 Bacterial regulatory proteins, luxR family COP00_07575 PF07730 Histidine kinase COP00_07575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase COP00_07580 PF00067 Cytochrome P450 COP00_07595 PF01380 SIS domain COP00_07610 PF00753 Metallo-beta-lactamase superfamily COP00_07620 PF00196 Bacterial regulatory proteins, luxR family COP00_07620 PF00072 Response regulator receiver domain COP00_07625 PF07730 Histidine kinase COP00_07625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase COP00_07630 PF00085 Thioredoxin COP00_07635 PF01925 Sulfite exporter TauE/SafE COP00_07645 PF01206 Sulfurtransferase TusA COP00_07645 PF00581 Rhodanese-like domain COP00_07650 PF13686 DsrE/DsrF/DrsH-like family COP00_07655 PF02583 Metal-sensitive transcriptional repressor COP00_07680 PF12706 Beta-lactamase superfamily domain COP00_07685 PF01037 Lrp/AsnC ligand binding domain COP00_07705 PF11975 Family 4 glycosyl hydrolase C-terminal domain COP00_07705 PF02056 Family 4 glycosyl hydrolase COP00_07730 PF01374 Glycosyl hydrolase family 46 COP00_07740 PF07992 Pyridine nucleotide-disulphide oxidoreductase COP00_07745 PF12625 Arabinose-binding domain of AraC transcription regulator, N-term COP00_07745 PF12833 Helix-turn-helix domain COP00_07750 PF00106 short chain dehydrogenase COP00_07760 PF14552 Tautomerase enzyme COP00_07770 PF15493 Domain of unknown function, YrpD COP00_07775 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment COP00_07780 PF00067 Cytochrome P450 COP00_07785 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal COP00_07785 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal COP00_07795 PF00324 Amino acid permease COP00_07800 PF01546 Peptidase family M20/M25/M40 COP00_07810 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase COP00_07810 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain COP00_07815 PF02668 Taurine catabolism dioxygenase TauD, TfdA family COP00_07820 PF10055 Uncharacterized small protein (DUF2292) COP00_07850 PF00251 Glycosyl hydrolases family 32 N-terminal domain COP00_07850 PF08244 Glycosyl hydrolases family 32 C terminal COP00_07855 PF03613 PTS system mannose/fructose/sorbose family IID component COP00_07860 PF03609 PTS system sorbose-specific iic component COP00_07865 PF03830 PTS system sorbose subfamily IIB component COP00_07870 PF03610 PTS system fructose IIA component COP00_07875 PF00874 PRD domain COP00_07875 PF03610 PTS system fructose IIA component COP00_07875 PF00158 Sigma-54 interaction domain COP00_07885 PF02655 ATP-grasp domain COP00_07885 PF00206 Lyase COP00_07890 PF02222 ATP-grasp domain COP00_07900 PF07685 CobB/CobQ-like glutamine amidotransferase domain COP00_07900 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain COP00_07900 PF00155 Aminotransferase class I and II COP00_07905 PF00324 Amino acid permease COP00_07910 PF11208 Protein of unknown function (DUF2992) COP00_07915 PF03466 LysR substrate binding domain COP00_07915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family COP00_07920 PF05901 Excalibur calcium-binding domain COP00_07920 PF00565 Staphylococcal nuclease homologue COP00_07935 PF07690 Major Facilitator Superfamily COP00_07945 PF03795 YCII-related domain COP00_07955 PF12833 Helix-turn-helix domain COP00_07955 PF02805 Metal binding domain of Ada COP00_07960 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain COP00_07960 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain COP00_07975 PF01638 HxlR-like helix-turn-helix COP00_07980 PF02602 Uroporphyrinogen-III synthase HemD COP00_07990 PF03466 LysR substrate binding domain COP00_07990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family COP00_08005 PF00667 FAD binding domain COP00_08005 PF00175 Oxidoreductase NAD-binding domain COP00_08005 PF00067 Cytochrome P450 COP00_08005 PF00258 Flavodoxin COP00_08010 PF00440 Bacterial regulatory proteins, tetR family COP00_08010 PF16295 Tetracyclin repressor-like, C-terminal domain COP00_08020 PF00082 Subtilase family COP00_08020 PF17936 Bacterial Ig domain COP00_08035 PF09501 Probable sporulation protein (Bac_small_yrzI) COP00_08045 PF14143 YrhC-like protein COP00_08050 PF01053 Cys/Met metabolism PLP-dependent enzyme COP00_08055 PF00291 Pyridoxal-phosphate dependent enzyme COP00_08060 PF01048 Phosphorylase superfamily COP00_08065 PF13649 Methyltransferase domain COP00_08070 PF10750 Protein of unknown function (DUF2536) COP00_08075 PF07423 Domain of unknown function (DUF1510) COP00_08080 PF00905 Penicillin binding protein transpeptidase domain COP00_08080 PF03717 Penicillin-binding Protein dimerisation domain COP00_08085 PF03449 Transcription elongation factor, N-terminal COP00_08085 PF01272 Transcription elongation factor, GreA/GreB, C-term COP00_08090 PF00485 Phosphoribulokinase / Uridine kinase family COP00_08110 PF02618 YceG-like family COP00_08115 PF06949 Protein of unknown function (DUF1292) COP00_08120 PF03652 Holliday junction resolvase COP00_08125 PF06135 IreB regulatory phosphoprotein COP00_08130 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain COP00_08130 PF02272 DHHA1 domain COP00_08130 PF01411 tRNA synthetases class II (A) COP00_08135 PF01594 AI-2E family transporter COP00_08140 PF00005 ABC transporter COP00_08145 PF00497 Bacterial extracellular solute-binding proteins, family 3 COP00_08150 PF00528 Binding-protein-dependent transport system inner membrane component COP00_08155 PF00528 Binding-protein-dependent transport system inner membrane component COP00_08160 PF13056 Protein of unknown function (DUF3918) COP00_08170 PF05239 PRC-barrel domain COP00_08175 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain COP00_08175 PF13538 UvrD-like helicase C-terminal domain COP00_08175 PF14490 Helix-hairpin-helix containing domain COP00_08180 PF13181 Tetratricopeptide repeat COP00_08180 PF07719 Tetratricopeptide repeat COP00_08190 PF00266 Aminotransferase class-V COP00_08195 PF02082 Transcriptional regulator COP00_08200 PF16193 AAA C-terminal domain COP00_08200 PF12002 MgsA AAA+ ATPase C terminal COP00_08200 PF05496 Holliday junction DNA helicase RuvB P-loop domain COP00_08210 PF00899 ThiF family COP00_08220 PF02938 GAD domain COP00_08220 PF00152 tRNA synthetases class II (D, K and N) COP00_08220 PF01336 OB-fold nucleic acid binding domain COP00_08225 PF13393 Histidyl-tRNA synthetase COP00_08225 PF03129 Anticodon binding domain COP00_08235 PF01520 N-acetylmuramoyl-L-alanine amidase COP00_08235 PF08239 Bacterial SH3 domain COP00_08240 PF02580 D-Tyr-tRNA(Tyr) deacylase COP00_08245 PF13291 ACT domain COP00_08245 PF02824 TGS domain COP00_08245 PF04607 Region found in RelA / SpoT proteins COP00_08250 PF00156 Phosphoribosyl transferase domain COP00_08255 PF01368 DHH family COP00_08255 PF02272 DHHA1 domain COP00_08255 PF17768 RecJ OB domain COP00_08255 PF10141 Single-strand DNA-specific exonuclease, C terminal domain COP00_08260 PF06305 Lipopolysaccharide assembly protein A domain COP00_08265 PF02080 TrkA-C domain COP00_08270 PF07549 SecD/SecF GG Motif COP00_08270 PF02355 Protein export membrane protein COP00_08275 PF13797 Post-transcriptional regulator COP00_08280 PF14667 Polysaccharide biosynthesis C-terminal domain COP00_08280 PF01943 Polysaccharide biosynthesis protein COP00_08285 PF04239 Protein of unknown function (DUF421) COP00_08290 PF12670 Protein of unknown function (DUF3792) COP00_08295 PF02699 Preprotein translocase subunit COP00_08300 PF01702 Queuine tRNA-ribosyltransferase COP00_08305 PF02547 Queuosine biosynthesis protein COP00_08310 PF11146 Protein of unknown function (DUF2905) COP00_08315 PF05496 Holliday junction DNA helicase RuvB P-loop domain COP00_08315 PF17864 RuvB AAA lid domain COP00_08315 PF05491 RuvB C-terminal winged helix domain COP00_08320 PF01330 RuvA N terminal domain COP00_08320 PF07499 RuvA, C-terminal domain COP00_08325 PF08955 BofC C-terminal domain COP00_08325 PF08977 Bypass of Forespore C, N terminal COP00_08335 PF08141 Small acid-soluble spore protein H family COP00_08340 PF05163 DinB family COP00_08345 PF05908 Poly-gamma-glutamate hydrolase COP00_08360 PF01709 Transcriptional regulator COP00_08365 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) COP00_08370 PF01476 LysM domain COP00_08380 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain COP00_08380 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain COP00_08385 PF00890 FAD binding domain COP00_08385 PF02910 Fumarate reductase flavoprotein C-term COP00_08395 PF08279 HTH domain COP00_08395 PF02829 3H domain COP00_08400 PF01842 ACT domain COP00_08400 PF00800 Prephenate dehydratase COP00_08405 PF01842 ACT domain COP00_08410 PF01018 GTP1/OBG COP00_08410 PF01926 50S ribosome-binding GTPase COP00_08410 PF09269 Domain of unknown function (DUF1967) COP00_08415 PF14682 Sporulation initiation phospho-transferase B, C-terminal COP00_08415 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain COP00_08420 PF01016 Ribosomal L27 protein COP00_08425 PF04327 Cysteine protease Prp COP00_08430 PF00829 Ribosomal prokaryotic L21 protein COP00_08435 PF02163 Peptidase family M50 COP00_08440 PF01551 Peptidase family M23 COP00_08445 PF08327 Activator of Hsp90 ATPase homolog 1-like protein COP00_08450 PF01022 Bacterial regulatory protein, arsR family COP00_08455 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain COP00_08460 PF03775 Septum formation inhibitor MinC, C-terminal domain COP00_08465 PF04093 rod shape-determining protein MreD COP00_08470 PF04085 rod shape-determining protein MreC COP00_08480 PF04002 RadC-like JAB domain COP00_08485 PF02545 Maf-like protein COP00_08490 PF05036 Sporulation related domain COP00_08495 PF06750 Bacterial Peptidase A24 N-terminal domain COP00_08495 PF01478 Type IV leader peptidase family COP00_08500 PF02875 Mur ligase family, glutamate ligase domain COP00_08500 PF08245 Mur ligase middle domain COP00_08520 PF01476 LysM domain COP00_08525 PF01476 LysM domain COP00_08530 PF00202 Aminotransferase class-III COP00_08535 PF00490 Delta-aminolevulinic acid dehydratase COP00_08540 PF02602 Uroporphyrinogen-III synthase HemD COP00_08545 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain COP00_08545 PF03900 Porphobilinogen deaminase, C-terminal domain COP00_08550 PF01578 Cytochrome C assembly protein COP00_08555 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain COP00_08555 PF01488 Shikimate / quinate 5-dehydrogenase COP00_08555 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain COP00_08565 PF01926 50S ribosome-binding GTPase COP00_08570 PF05362 Lon protease (S16) C-terminal proteolytic domain COP00_08570 PF00004 ATPase family associated with various cellular activities (AAA) COP00_08570 PF02190 ATP-dependent protease La (LON) substrate-binding domain COP00_08575 PF00004 ATPase family associated with various cellular activities (AAA) COP00_08575 PF05362 Lon protease (S16) C-terminal proteolytic domain COP00_08580 PF06689 ClpX C4-type zinc finger COP00_08580 PF10431 C-terminal, D2-small domain, of ClpB protein COP00_08580 PF07724 AAA domain (Cdc48 subfamily) COP00_08585 PF05698 Bacterial trigger factor protein (TF) C-terminus COP00_08585 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase COP00_08585 PF05697 Bacterial trigger factor protein (TF) COP00_08595 PF00694 Aconitase C-terminal domain COP00_08605 PF00180 Isocitrate/isopropylmalate dehydrogenase COP00_08610 PF00682 HMGL-like COP00_08610 PF08502 LeuA allosteric (dimerisation) domain COP00_08615 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain COP00_08615 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain COP00_08620 PF01842 ACT domain COP00_08620 PF10369 Small subunit of acetolactate synthase COP00_08625 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain COP00_08625 PF00205 Thiamine pyrophosphate enzyme, central domain COP00_08625 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain COP00_08630 PF01063 Amino-transferase class IV COP00_08640 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase COP00_08640 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain COP00_08680 PF12850 Calcineurin-like phosphoesterase superfamily domain COP00_08685 PF01725 Ham1 family COP00_08690 PF03725 3' exoribonuclease family, domain 2 COP00_08690 PF01138 3' exoribonuclease family, domain 1 COP00_08695 PF10646 Sporulation and spore germination COP00_08700 PF01177 Asp/Glu/Hydantoin racemase COP00_08705 PF01047 MarR family COP00_08710 PF00196 Bacterial regulatory proteins, luxR family COP00_08715 PF00106 short chain dehydrogenase COP00_08720 PF03061 Thioesterase superfamily COP00_08725 PF13085 2Fe-2S iron-sulfur cluster binding domain COP00_08725 PF13183 4Fe-4S dicluster domain COP00_08730 PF02910 Fumarate reductase flavoprotein C-term COP00_08730 PF00890 FAD binding domain COP00_08735 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit COP00_08740 PF10702 Protein of unknown function (DUF2507) COP00_08750 PF00696 Amino acid kinase family COP00_08750 PF01842 ACT domain COP00_08750 PF13840 ACT domain COP00_08760 PF01541 GIY-YIG catalytic domain COP00_08760 PF02151 UvrB/uvrC motif COP00_08760 PF08459 UvrC Helix-hairpin-helix N-terminal COP00_08765 PF00085 Thioredoxin COP00_08770 PF00766 Electron transfer flavoprotein FAD-binding domain COP00_08770 PF01012 Electron transfer flavoprotein domain COP00_08775 PF01012 Electron transfer flavoprotein domain COP00_08780 PF00378 Enoyl-CoA hydratase/isomerase COP00_08785 PF08359 YsiA-like protein, C-terminal region COP00_08785 PF00440 Bacterial regulatory proteins, tetR family COP00_08800 PF02525 Flavodoxin-like fold COP00_08815 PF03994 Domain of Unknown Function (DUF350) COP00_08820 PF00488 MutS domain V COP00_08820 PF01713 Smr domain COP00_08825 PF02811 PHP domain COP00_08825 PF14716 Helix-hairpin-helix domain COP00_08825 PF14791 DNA polymerase beta thumb COP00_08830 PF02674 Colicin V production protein COP00_08835 PF05164 Cell division protein ZapA COP00_08840 PF11858 Domain of unknown function (DUF3378) COP00_08840 PF01351 Ribonuclease HII COP00_08855 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain COP00_08855 PF01588 Putative tRNA binding domain COP00_08855 PF03147 Ferredoxin-fold anticodon binding domain COP00_08855 PF03484 tRNA synthetase B5 domain COP00_08855 PF03483 B3/4 domain COP00_08860 PF01409 tRNA synthetases class II core domain (F) COP00_08860 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain COP00_08865 PF00588 SpoU rRNA Methylase family COP00_08865 PF08032 RNA 2'-O ribose methyltransferase substrate binding COP00_08870 PF14098 Small, acid-soluble spore protein I COP00_08875 PF13722 5TM C-terminal transporter carbon starvation CstA COP00_08875 PF02554 Carbon starvation protein CstA COP00_08880 PF00440 Bacterial regulatory proteins, tetR family COP00_08880 PF13977 BetI-type transcriptional repressor, C-terminal COP00_08885 PF03703 Bacterial PH domain COP00_08890 PF03703 Bacterial PH domain COP00_08900 PF06964 Alpha-L-arabinofuranosidase C-terminal domain COP00_08905 PF00528 Binding-protein-dependent transport system inner membrane component COP00_08910 PF00528 Binding-protein-dependent transport system inner membrane component COP00_08915 PF01547 Bacterial extracellular solute-binding protein COP00_08920 PF13685 Iron-containing alcohol dehydrogenase COP00_08925 PF00596 Class II Aldolase and Adducin N-terminal domain COP00_08930 PF00370 FGGY family of carbohydrate kinases, N-terminal domain COP00_08930 PF02782 FGGY family of carbohydrate kinases, C-terminal domain COP00_08935 PF02610 L-arabinose isomerase COP00_08935 PF11762 L-arabinose isomerase C-terminal domain COP00_08945 PF05343 M42 glutamyl aminopeptidase COP00_08955 PF06961 Protein of unknown function (DUF1294) COP00_08960 PF00453 Ribosomal protein L20 COP00_08965 PF01632 Ribosomal protein L35 COP00_08970 PF00707 Translation initiation factor IF-3, C-terminal domain COP00_08970 PF05198 Translation initiation factor IF-3, N-terminal domain COP00_08975 PF04172 LrgB-like family COP00_08980 PF03788 LrgA family COP00_08985 PF16655 PhoD-like phosphatase, N-terminal domain COP00_08985 PF09423 PhoD-like phosphatase COP00_08990 PF04397 LytTr DNA-binding domain COP00_08990 PF00072 Response regulator receiver domain COP00_08995 PF07694 5TMR of 5TMR-LYT COP00_08995 PF06580 Histidine kinase COP00_08995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase COP00_09005 PF03129 Anticodon binding domain COP00_09005 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain COP00_09005 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) COP00_09005 PF02824 TGS domain COP00_09010 PF08812 YtxC-like family COP00_09015 PF09335 SNARE associated Golgi protein COP00_09020 PF07319 Primosomal protein DnaI N-terminus COP00_09020 PF01695 IstB-like ATP binding protein COP00_09025 PF07261 Replication initiation and membrane attachment COP00_09030 PF03477 ATP cone domain COP00_09040 PF02675 S-adenosylmethionine decarboxylase COP00_09045 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain COP00_09045 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain COP00_09050 PF00544 Pectate lyase COP00_09055 PF01121 Dephospho-CoA kinase COP00_09060 PF02659 Putative manganese efflux pump COP00_09065 PF06827 Zinc finger found in FPG and IleRS COP00_09065 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain COP00_09065 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain COP00_09070 PF00476 DNA polymerase family A COP00_09070 PF01367 5'-3' exonuclease, C-terminal SAM fold COP00_09070 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain COP00_09075 PF00989 PAS fold COP00_09075 PF16736 Single Cache-like COP00_09075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase COP00_09075 PF00512 His Kinase A (phospho-acceptor) domain COP00_09080 PF00072 Response regulator receiver domain COP00_09080 PF00486 Transcriptional regulatory protein, C terminal COP00_09085 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain COP00_09085 PF00056 lactate/malate dehydrogenase, NAD binding domain COP00_09090 PF00180 Isocitrate/isopropylmalate dehydrogenase COP00_09095 PF00285 Citrate synthase, C-terminal domain COP00_09100 PF04284 Protein of unknown function (DUF441) COP00_09105 PF01594 AI-2E family transporter COP00_09110 PF04186 FxsA cytoplasmic membrane protein COP00_09115 PF00391 PEP-utilising enzyme, mobile domain COP00_09115 PF00224 Pyruvate kinase, barrel domain COP00_09115 PF02887 Pyruvate kinase, alpha/beta domain COP00_09120 PF00365 Phosphofructokinase COP00_09125 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit COP00_09130 PF01039 Carboxyl transferase domain COP00_09130 PF17848 Acetyl-coA carboxylase zinc finger domain COP00_09135 PF00390 Malic enzyme, N-terminal domain COP00_09135 PF03949 Malic enzyme, NAD binding domain COP00_09140 PF01336 OB-fold nucleic acid binding domain COP00_09140 PF17657 Bacterial DNA polymerase III alpha subunit finger domain COP00_09140 PF07733 Bacterial DNA polymerase III alpha NTPase domain COP00_09140 PF02811 PHP domain COP00_09140 PF14579 Helix-hairpin-helix motif COP00_09145 PF14034 Sporulation protein YtrH COP00_09175 PF03551 Transcriptional regulator PadR-like family COP00_09175 PF10400 Virulence activator alpha C-term COP00_09190 PF14698 Argininosuccinate lyase C-terminal COP00_09190 PF00206 Lyase COP00_09195 PF00764 Arginosuccinate synthase COP00_09200 PF00994 Probable molybdopterin binding domain COP00_09205 PF00871 Acetokinase family COP00_09210 PF02384 N-6 DNA Methylase COP00_09215 PF08534 Redoxin COP00_09220 PF09579 Sporulation protein YtfJ (Spore_YtfJ) COP00_09225 PF11167 Protein of unknown function (DUF2953) COP00_09230 PF06271 RDD family COP00_09235 PF01343 Peptidase family S49 COP00_09240 PF01513 ATP-NAD kinase COP00_09250 PF13193 AMP-binding enzyme C-terminal domain COP00_09250 PF00501 AMP-binding enzyme COP00_09255 PF00269 Small, acid-soluble spore proteins, alpha/beta type COP00_09260 PF02568 Thiamine biosynthesis protein (ThiI) COP00_09260 PF02926 THUMP domain COP00_09270 PF05525 Branched-chain amino acid transport protein COP00_09275 PF06160 Septation ring formation regulator, EzrA COP00_09285 PF02811 PHP domain COP00_09290 PF00440 Bacterial regulatory proteins, tetR family COP00_09295 PF13185 GAF domain COP00_09300 PF00990 Diguanylate cyclase, GGDEF domain COP00_09310 PF01479 S4 domain COP00_09310 PF00163 Ribosomal protein S4/S9 N-terminal domain COP00_09320 PF05656 Protein of unknown function (DUF805) COP00_09325 PF00579 tRNA synthetases class I (W and Y) COP00_09325 PF01479 S4 domain COP00_09330 PF00501 AMP-binding enzyme COP00_09330 PF13193 AMP-binding enzyme C-terminal domain COP00_09335 PF00583 Acetyltransferase (GNAT) family COP00_09340 PF00571 CBS domain COP00_09345 PF00850 Histone deacetylase domain COP00_09350 PF00691 OmpA family COP00_09350 PF13677 Membrane MotB of proton-channel complex MotA/MotB COP00_09355 PF01618 MotA/TolQ/ExbB proton channel family COP00_09360 PF00356 Bacterial regulatory proteins, lacI family COP00_09365 PF00793 DAHP synthetase I family COP00_09365 PF01817 Chorismate mutase type II COP00_09375 PF11009 Protein of unknown function (DUF2847) COP00_09380 PF12732 YtxH-like protein COP00_09385 PF06103 Bacterial protein of unknown function (DUF948) COP00_09390 PF01225 Mur ligase family, catalytic domain COP00_09390 PF02875 Mur ligase family, glutamate ligase domain COP00_09390 PF08245 Mur ligase middle domain COP00_09395 PF09397 Ftsk gamma domain COP00_09395 PF01580 FtsK/SpoIIIE family COP00_09395 PF17854 FtsK alpha domain COP00_09400 PF14794 Domain of unknown function (DUF4479) COP00_09400 PF01588 Putative tRNA binding domain COP00_09405 PF07285 Protein of unknown function (DUF1444) COP00_09410 PF00085 Thioredoxin COP00_09415 PF11071 Nucleoside 2-deoxyribosyltransferase YtoQ COP00_09420 PF05343 M42 glutamyl aminopeptidase COP00_09425 PF03413 Peptidase propeptide and YPEB domain COP00_09430 PF03949 Malic enzyme, NAD binding domain COP00_09430 PF00390 Malic enzyme, N-terminal domain COP00_09435 PF00753 Metallo-beta-lactamase superfamily COP00_09440 PF02390 Putative methyltransferase COP00_09445 PF14165 YtzH-like protein COP00_09450 PF01636 Phosphotransferase enzyme family COP00_09455 PF00781 Diacylglycerol kinase catalytic domain COP00_09470 PF00291 Pyridoxal-phosphate dependent enzyme COP00_09480 PF01546 Peptidase family M20/M25/M40 COP00_09485 PF00860 Permease family COP00_09490 PF08220 DeoR-like helix-turn-helix domain COP00_09495 PF00849 RNA pseudouridylate synthase COP00_09495 PF01479 S4 domain COP00_09500 PF14667 Polysaccharide biosynthesis C-terminal domain COP00_09500 PF01943 Polysaccharide biosynthesis protein COP00_09515 PF00455 DeoR C terminal sensor domain COP00_09515 PF08220 DeoR-like helix-turn-helix domain COP00_09520 PF07005 Sugar-binding N-terminal domain COP00_09520 PF17042 Nucleotide-binding C-terminal domain COP00_09525 PF04166 Pyridoxal phosphate biosynthetic protein PdxA COP00_09530 PF02447 GntP family permease COP00_09535 PF10957 Sporulation protein Cse60 COP00_09545 PF00581 Rhodanese-like domain COP00_09560 PF04854 Protein of unknown function, DUF624 COP00_09565 PF02894 Oxidoreductase family, C-terminal alpha/beta domain COP00_09565 PF01408 Oxidoreductase family, NAD-binding Rossmann fold COP00_09575 PF07470 Glycosyl Hydrolase Family 88 COP00_09580 PF00528 Binding-protein-dependent transport system inner membrane component COP00_09590 PF13416 Bacterial extracellular solute-binding protein COP00_09595 PF00528 Binding-protein-dependent transport system inner membrane component COP00_09600 PF01370 NAD dependent epimerase/dehydratase family COP00_09615 PF03466 LysR substrate binding domain COP00_09615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family COP00_09620 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily COP00_09625 PF00133 tRNA synthetases class I (I, L, M and V) COP00_09625 PF13603 Leucyl-tRNA synthetase, Domain 2 COP00_09625 PF09334 tRNA synthetases class I (M) COP00_09625 PF08264 Anticodon-binding domain of tRNA COP00_09630 PF14074 Protein of unknown function (DUF4257) COP00_09635 PF07690 Major Facilitator Superfamily COP00_09650 PF03180 NLPA lipoprotein COP00_09655 PF04791 LMBR1-like membrane protein COP00_09660 PF12704 MacB-like periplasmic core domain COP00_09660 PF02687 FtsX-like permease family COP00_09665 PF00005 ABC transporter COP00_09675 PF00005 ABC transporter COP00_09680 PF00392 Bacterial regulatory proteins, gntR family COP00_09685 PF10732 Protein of unknown function (DUF2524) COP00_09690 PF04055 Radical SAM superfamily COP00_09690 PF16199 Radical_SAM C-terminal domain COP00_09695 PF06962 Putative rRNA methylase COP00_09700 PF00375 Sodium:dicarboxylate symporter family COP00_09705 PF10776 Protein of unknown function (DUF2600) COP00_09715 PF00132 Bacterial transferase hexapeptide (six repeats) COP00_09720 PF01569 PAP2 superfamily COP00_09725 PF13439 Glycosyltransferase Family 4 COP00_09725 PF00534 Glycosyl transferases group 1 COP00_09730 PF13537 Glutamine amidotransferase domain COP00_09730 PF00733 Asparagine synthase COP00_09735 PF00438 S-adenosylmethionine synthetase, N-terminal domain COP00_09735 PF02772 S-adenosylmethionine synthetase, central domain COP00_09735 PF02773 S-adenosylmethionine synthetase, C-terminal domain COP00_09740 PF01293 Phosphoenolpyruvate carboxykinase COP00_09745 PF10763 Protein of unknown function (DUF2584) COP00_09750 PF00326 Prolyl oligopeptidase family COP00_09760 PF00005 ABC transporter COP00_09765 PF00528 Binding-protein-dependent transport system inner membrane component COP00_09770 PF00293 NUDIX domain COP00_09785 PF05105 Bacteriophage holin family COP00_09790 PF00210 Ferritin-like domain COP00_09800 PF13115 YtkA-like COP00_09805 PF02664 S-Ribosylhomocysteinase (LuxS) COP00_09810 PF01809 Putative membrane protein insertion efficiency factor COP00_09815 PF00484 Carbonic anhydrase COP00_09820 PF01297 Zinc-uptake complex component A periplasmic COP00_09825 PF01197 Ribosomal protein L31 COP00_09830 PF01654 Cytochrome bd terminal oxidase subunit I COP00_09835 PF02322 Cytochrome bd terminal oxidase subunit II COP00_09840 PF07561 Domain of Unknown Function (DUF1540) COP00_09850 PF03972 MmgE/PrpD family COP00_09860 PF00005 ABC transporter COP00_09865 PF00528 Binding-protein-dependent transport system inner membrane component COP00_09870 PF00497 Bacterial extracellular solute-binding proteins, family 3 COP00_09885 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain COP00_09885 PF13378 Enolase C-terminal domain-like COP00_09890 PF00501 AMP-binding enzyme COP00_09890 PF13193 AMP-binding enzyme C-terminal domain COP00_09895 PF00378 Enoyl-CoA hydratase/isomerase COP00_09905 PF16582 Middle domain of thiamine pyrophosphate COP00_09905 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain COP00_09905 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain COP00_09910 PF00425 chorismate binding enzyme COP00_09915 PF01040 UbiA prenyltransferase family COP00_09920 PF01258 Prokaryotic dksA/traR C4-type zinc finger COP00_10040 PF13411 MerR HTH family regulatory protein COP00_10045 PF02627 Carboxymuconolactone decarboxylase family COP00_10070 PF00392 Bacterial regulatory proteins, gntR family COP00_10075 PF09515 Thiamine transporter protein (Thia_YuaJ) COP00_10080 PF04203 Sortase domain COP00_10095 PF18801 response regulator aspartate phosphatase H, N terminal COP00_10100 PF01470 Pyroglutamyl peptidase COP00_10105 PF12867 DinB superfamily COP00_10115 PF00465 Iron-containing alcohol dehydrogenase COP00_10130 PF00175 Oxidoreductase NAD-binding domain COP00_10130 PF00042 Globin COP00_10130 PF00970 Oxidoreductase FAD-binding domain COP00_10200 PF09855 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) COP00_10210 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase COP00_10220 PF00149 Calcineurin-like phosphoesterase COP00_10225 PF02673 Bacitracin resistance protein BacA COP00_10230 PF01594 AI-2E family transporter COP00_10245 PF00672 HAMP domain COP00_10245 PF02743 Cache domain COP00_10245 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain COP00_10250 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain COP00_10250 PF00672 HAMP domain COP00_10250 PF02743 Cache domain COP00_10265 PF01894 Uncharacterised protein family UPF0047 COP00_10270 PF16657 Maltogenic Amylase, C-terminal domain COP00_10270 PF00128 Alpha amylase, catalytic domain COP00_10275 PF01670 Glycosyl hydrolase family 12 COP00_10280 PF00571 CBS domain COP00_10280 PF03471 Transporter associated domain COP00_10280 PF01595 Cyclin M transmembrane N-terminal domain COP00_10285 PF04298 Putative neutral zinc metallopeptidase COP00_10295 PF11458 Membrane-integrating protein Mistic COP00_10300 PF07885 Ion channel COP00_10300 PF02254 TrkA-N domain COP00_10305 PF08868 YugN-like family COP00_10315 PF00342 Phosphoglucose isomerase COP00_10320 PF00465 Iron-containing alcohol dehydrogenase COP00_10325 PF04070 Domain of unknown function (DUF378) COP00_10330 PF00575 S1 RNA binding domain COP00_10335 PF00155 Aminotransferase class I and II COP00_10340 PF01037 Lrp/AsnC ligand binding domain COP00_10345 PF08386 TAP-like protein COP00_10345 PF00561 alpha/beta hydrolase fold COP00_10350 PF08958 Domain of unknown function (DUF1871) COP00_10355 PF00155 Aminotransferase class I and II COP00_10365 PF08810 Kinase associated protein B COP00_10370 PF00929 Exonuclease COP00_10375 PF07690 Major Facilitator Superfamily COP00_10380 PF00912 Transglycosylase COP00_10380 PF00905 Penicillin binding protein transpeptidase domain COP00_10385 PF04134 Protein of unknown function, DUF393 COP00_10390 PF17328 Family of unknown function (DUF5366) COP00_10395 PF00989 PAS fold COP00_10395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase COP00_10395 PF17203 Single cache domain 3 COP00_10395 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain COP00_10400 PF00072 Response regulator receiver domain COP00_10425 PF01066 CDP-alcohol phosphatidyltransferase COP00_10430 PF09335 SNARE associated Golgi protein COP00_10435 PF02666 Phosphatidylserine decarboxylase COP00_10440 PF03390 2-hydroxycarboxylate transporter family COP00_10450 PF13244 Domain of unknown function (DUF4040) COP00_10450 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus COP00_10450 PF00361 Proton-conducting membrane transporter COP00_10455 PF04039 Domain related to MnhB subunit of Na+/H+ antiporter COP00_10460 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L COP00_10465 PF00361 Proton-conducting membrane transporter COP00_10470 PF01899 Na+/H+ ion antiporter subunit COP00_10475 PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) COP00_10480 PF03334 Na+/H+ antiporter subunit COP00_10485 PF03061 Thioesterase superfamily COP00_10490 PF00196 Bacterial regulatory proteins, luxR family COP00_10490 PF00072 Response regulator receiver domain COP00_10495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase COP00_10495 PF07730 Histidine kinase COP00_10500 PF05952 Bacillus competence pheromone ComX COP00_10505 PF00348 Polyprenyl synthetase COP00_10510 PF08181 DegQ (SacQ) family COP00_10525 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain COP00_10525 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain COP00_10525 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family COP00_10530 PF00857 Isochorismatase family COP00_10535 PF07997 Protein of unknown function (DUF1694) COP00_10540 PF14166 YueH-like protein COP00_10550 PF01594 AI-2E family transporter COP00_10570 PF01966 HD domain COP00_10575 PF00106 short chain dehydrogenase COP00_10585 PF17355 Family of unknown function (DUF5383) COP00_10595 PF01580 FtsK/SpoIIIE family COP00_10595 PF12538 DNA transporter COP00_10600 PF10140 WXG100 protein secretion system (Wss), protein YukC COP00_10605 PF08817 WXG100 protein secretion system (Wss), protein YukD COP00_10610 PF06013 Proteins of 100 residues with WXG COP00_10615 PF17853 GGDEF-like domain COP00_10615 PF13556 PucR C-terminal helix-turn-helix domain COP00_10615 PF06018 CodY GAF-like domain COP00_10620 PF01262 Alanine dehydrogenase/PNT, C-terminal domain COP00_10620 PF05222 Alanine dehydrogenase/PNT, N-terminal domain COP00_10625 PF00174 Oxidoreductase molybdopterin binding domain COP00_10630 PF02632 BioY family COP00_10635 PF13726 Na+-H+ antiporter family COP00_10635 PF03553 Na+/H+ antiporter family COP00_10640 PF00883 Cytosol aminopeptidase family, catalytic domain COP00_10640 PF02789 Cytosol aminopeptidase family, N-terminal domain COP00_10645 PF02681 Divergent PAP2 family COP00_10650 PF06725 3D domain COP00_10655 PF14068 Putative membrane protein COP00_10660 PF07992 Pyridine nucleotide-disulphide oxidoreductase COP00_10670 PF07992 Pyridine nucleotide-disulphide oxidoreductase COP00_10680 PF14169 Cold-inducible protein YdjO COP00_10700 PF01521 Iron-sulphur cluster biosynthesis COP00_10705 PF01678 Diaminopimelate epimerase COP00_10710 PF07293 Protein of unknown function (DUF1450) COP00_10715 PF07992 Pyridine nucleotide-disulphide oxidoreductase COP00_10730 PF18801 response regulator aspartate phosphatase H, N terminal COP00_10735 PF05870 Phenolic acid decarboxylase (PAD) COP00_10745 PF07315 Protein of unknown function (DUF1462) COP00_10750 PF01106 NifU-like domain COP00_10760 PF00288 GHMP kinases N terminal domain COP00_10760 PF08544 GHMP kinases C terminal COP00_10765 PF00291 Pyridoxal-phosphate dependent enzyme COP00_10770 PF00742 Homoserine dehydrogenase COP00_10770 PF03447 Homoserine dehydrogenase, NAD binding domain COP00_10770 PF01842 ACT domain COP00_10775 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain COP00_10775 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain COP00_10785 PF04608 Phosphatidylglycerophosphatase A COP00_10790 PF13344 Haloacid dehalogenase-like hydrolase COP00_10795 PF01934 Protein of unknown function DUF86 COP00_10800 PF06265 Protein of unknown function (DUF1027) COP00_10805 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) COP00_10810 PF04055 Radical SAM superfamily COP00_10810 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family COP00_10815 PF01551 Peptidase family M23 COP00_10820 PF09560 Sporulation protein YunB (Spo_YunB) COP00_10825 PF08827 Domain of unknown function (DUF1805) COP00_10830 PF02872 5'-nucleotidase, C-terminal domain COP00_10835 PF01925 Sulfite exporter TauE/SafE COP00_10840 PF01904 Protein of unknown function DUF72 COP00_10850 PF13977 BetI-type transcriptional repressor, C-terminal COP00_10850 PF00440 Bacterial regulatory proteins, tetR family COP00_10855 PF07690 Major Facilitator Superfamily COP00_10860 PF04231 Endonuclease I COP00_10865 PF00005 ABC transporter COP00_10865 PF03459 TOBE domain COP00_10865 PF17912 MalK OB fold domain COP00_10870 PF07702 UTRA domain COP00_10870 PF00392 Bacterial regulatory proteins, gntR family COP00_10875 PF00294 pfkB family carbohydrate kinase COP00_10880 PF00528 Binding-protein-dependent transport system inner membrane component COP00_10885 PF00528 Binding-protein-dependent transport system inner membrane component COP00_10890 PF01547 Bacterial extracellular solute-binding protein COP00_10895 PF01380 SIS domain COP00_10900 PF00111 2Fe-2S iron-sulfur cluster binding domain COP00_10900 PF01799 [2Fe-2S] binding domain COP00_10910 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain COP00_10910 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase COP00_10915 PF12804 MobA-like NTP transferase domain COP00_10920 PF02625 XdhC and CoxI family COP00_10920 PF13478 XdhC Rossmann domain COP00_10925 PF01266 FAD dependent oxidoreductase COP00_10945 PF01458 Uncharacterized protein family (UPF0051) COP00_10950 PF01592 NifU-like N terminal domain COP00_10955 PF00266 Aminotransferase class-V COP00_10960 PF01458 Uncharacterized protein family (UPF0051) COP00_10965 PF00005 ABC transporter COP00_10970 PF01545 Cation efflux family COP00_10970 PF16916 Dimerisation domain of Zinc Transporter COP00_10975 PF02627 Carboxymuconolactone decarboxylase family COP00_10980 PF03180 NLPA lipoprotein COP00_10985 PF00528 Binding-protein-dependent transport system inner membrane component COP00_10990 PF00005 ABC transporter COP00_10990 PF09383 NIL domain COP00_10995 PF02036 SCP-2 sterol transfer family COP00_11000 PF00085 Thioredoxin COP00_11005 PF01751 Toprim domain COP00_11010 PF10830 Protein of unknown function (DUF2553) COP00_11015 PF01597 Glycine cleavage H-protein COP00_11020 PF03960 ArsC family COP00_11025 PF02771 Acyl-CoA dehydrogenase, N-terminal domain COP00_11025 PF02770 Acyl-CoA dehydrogenase, middle domain COP00_11025 PF00441 Acyl-CoA dehydrogenase, C-terminal domain COP00_11030 PF02803 Thiolase, C-terminal domain COP00_11030 PF00108 Thiolase, N-terminal domain COP00_11035 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain COP00_11035 PF00378 Enoyl-CoA hydratase/isomerase COP00_11035 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain COP00_11040 PF14115 YuzL-like protein COP00_11050 PF07875 Coat F domain COP00_11055 PF10835 Protein of unknown function (DUF2573) COP00_11065 PF00005 ABC transporter COP00_11070 PF01032 FecCD transport family COP00_11075 PF01032 FecCD transport family COP00_11080 PF01497 Periplasmic binding protein COP00_11085 PF14039 YusW-like protein COP00_11095 PF00768 D-alanyl-D-alanine carboxypeptidase COP00_11095 PF07943 Penicillin-binding protein 5, C-terminal domain COP00_11100 PF00106 short chain dehydrogenase COP00_11105 PF00210 Ferritin-like domain COP00_11110 PF13180 PDZ domain COP00_11115 PF00486 Transcriptional regulatory protein, C terminal COP00_11115 PF00072 Response regulator receiver domain COP00_11120 PF00672 HAMP domain COP00_11120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase COP00_11120 PF00512 His Kinase A (phospho-acceptor) domain COP00_11130 PF00440 Bacterial regulatory proteins, tetR family COP00_11135 PF10415 Fumarase C C-terminus COP00_11135 PF00206 Lyase COP00_11140 PF13113 Protein of unknown function (DUF3970) COP00_11145 PF03323 Bacillus/Clostridium GerA spore germination protein COP00_11150 PF03845 Spore germination protein COP00_11155 PF05504 Spore germination B3/ GerAC like, C-terminal COP00_11165 PF00072 Response regulator receiver domain COP00_11165 PF00196 Bacterial regulatory proteins, luxR family COP00_11170 PF07730 Histidine kinase COP00_11170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase COP00_11170 PF00672 HAMP domain COP00_11175 PF09922 Cell wall-active antibiotics response 4TMS YvqF COP00_11185 PF04012 PspA/IM30 family COP00_11195 PF01095 Pectinesterase COP00_11210 PF13439 Glycosyltransferase Family 4 COP00_11210 PF00534 Glycosyl transferases group 1 COP00_11215 PF01923 Cobalamin adenosyltransferase COP00_11220 PF00005 ABC transporter COP00_11225 PF01032 FecCD transport family COP00_11230 PF01497 Periplasmic binding protein COP00_11235 PF00106 short chain dehydrogenase COP00_11240 PF03475 3-alpha domain COP00_11240 PF03473 MOSC domain COP00_11245 PF03466 LysR substrate binding domain COP00_11245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family COP00_11250 PF00295 Glycosyl hydrolases family 28 COP00_11260 PF08125 Mannitol dehydrogenase C-terminal domain COP00_11260 PF01232 Mannitol dehydrogenase Rossmann domain COP00_11265 PF00356 Bacterial regulatory proteins, lacI family COP00_11275 PF02614 Glucuronate isomerase COP00_11280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase COP00_11280 PF00512 His Kinase A (phospho-acceptor) domain COP00_11285 PF00072 Response regulator receiver domain COP00_11285 PF00486 Transcriptional regulatory protein, C terminal COP00_11290 PF00005 ABC transporter COP00_11295 PF01032 FecCD transport family COP00_11300 PF01032 FecCD transport family COP00_11305 PF13520 Amino acid permease COP00_11310 PF09575 Small spore protein J (Spore_SspJ) COP00_11315 PF04307 LexA-binding, inner membrane-associated putative hydrolase COP00_11320 PF00884 Sulfatase COP00_11325 PF07690 Major Facilitator Superfamily COP00_11330 PF00248 Aldo/keto reductase family COP00_11335 PF00480 ROK family COP00_11340 PF00999 Sodium/hydrogen exchanger family COP00_11345 PF00266 Aminotransferase class-V COP00_11355 PF13538 UvrD-like helicase C-terminal domain COP00_11360 PF03458 UPF0126 domain COP00_11365 PF13673 Acetyltransferase (GNAT) domain COP00_11365 PF04229 GrpB protein COP00_11370 PF00583 Acetyltransferase (GNAT) family COP00_11370 PF13673 Acetyltransferase (GNAT) domain COP00_11375 PF02600 Disulfide bond formation protein DsbB COP00_11380 PF13462 Thioredoxin COP00_11385 PF00403 Heavy-metal-associated domain COP00_11395 PF00528 Binding-protein-dependent transport system inner membrane component COP00_11400 PF00528 Binding-protein-dependent transport system inner membrane component COP00_11405 PF01055 Glycosyl hydrolases family 31 COP00_11405 PF13802 Galactose mutarotase-like COP00_11410 PF14310 Fibronectin type III-like domain COP00_11410 PF00933 Glycosyl hydrolase family 3 N terminal domain COP00_11410 PF01915 Glycosyl hydrolase family 3 C-terminal domain COP00_11410 PF07691 PA14 domain COP00_11415 PF00005 ABC transporter COP00_11420 PF00950 ABC 3 transport family COP00_11425 PF01297 Zinc-uptake complex component A periplasmic COP00_11440 PF00294 pfkB family carbohydrate kinase COP00_11445 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 COP00_11445 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit COP00_11450 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 COP00_11455 PF01116 Fructose-bisphosphate aldolase class-II COP00_11460 PF00403 Heavy-metal-associated domain COP00_11465 PF00403 Heavy-metal-associated domain COP00_11470 PF02583 Metal-sensitive transcriptional repressor COP00_11475 PF01965 DJ-1/PfpI family COP00_11480 PF00455 DeoR C terminal sensor domain COP00_11480 PF08220 DeoR-like helix-turn-helix domain COP00_11485 PF00370 FGGY family of carbohydrate kinases, N-terminal domain COP00_11485 PF02782 FGGY family of carbohydrate kinases, C-terminal domain COP00_11490 PF01261 Xylose isomerase-like TIM barrel COP00_11500 PF00596 Class II Aldolase and Adducin N-terminal domain COP00_11505 PF07690 Major Facilitator Superfamily COP00_11510 PF03575 Peptidase family S51 COP00_11515 PF07690 Major Facilitator Superfamily COP00_11520 PF01047 MarR family COP00_11525 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase COP00_11530 PF02894 Oxidoreductase family, C-terminal alpha/beta domain COP00_11530 PF01408 Oxidoreductase family, NAD-binding Rossmann fold COP00_11535 PF02525 Flavodoxin-like fold COP00_11550 PF04545 Sigma-70, region 4 COP00_11555 PF12841 YvrJ protein family COP00_11560 PF00190 Cupin COP00_11575 PF17189 Glycosyl hydrolase family 30 beta sandwich domain COP00_11580 PF03422 Carbohydrate binding module (family 6) COP00_11580 PF04616 Glycosyl hydrolases family 43 COP00_11590 PF08863 YolD-like protein COP00_11600 PF01510 N-acetylmuramoyl-L-alanine amidase COP00_11600 PF01471 Putative peptidoglycan binding domain COP00_11605 PF04688 SPP1 phage holin COP00_11610 PF10779 Haemolysin XhlA COP00_11630 PF12708 Pectate lyase superfamily protein COP00_11630 PF11962 Peptidase_G2, IMC autoproteolytic cleavage domain COP00_11645 PF01464 Transglycosylase SLT domain COP00_11690 PF00574 Clp protease COP00_11705 PF03354 Phage Terminase COP00_11750 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system COP00_11755 PF00589 Phage integrase family COP00_11775 PF00145 C-5 cytosine-specific DNA methylase COP00_11800 PF17356 Phage-like element PBSX protein XtrA COP00_11865 PF01381 Helix-turn-helix COP00_11875 PF00589 Phage integrase family COP00_11875 PF14659 Phage integrase, N-terminal SAM-like domain COP00_11885 PF01668 SmpB protein COP00_11895 PF12146 Serine aminopeptidase, S33 COP00_11900 PF03840 Preprotein translocase SecG subunit COP00_11905 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin COP00_11905 PF18277 AbrB C-terminal domain COP00_11910 PF01381 Helix-turn-helix COP00_11925 PF00528 Binding-protein-dependent transport system inner membrane component COP00_11930 PF04069 Substrate binding domain of ABC-type glycine betaine transport system COP00_11935 PF00528 Binding-protein-dependent transport system inner membrane component COP00_11940 PF00571 CBS domain COP00_11940 PF00005 ABC transporter COP00_11945 PF12802 MarR family COP00_11950 PF01914 MarC family integral membrane protein COP00_11960 PF13240 zinc-ribbon domain COP00_11965 PF01497 Periplasmic binding protein COP00_11980 PF01676 Metalloenzyme superfamily COP00_11980 PF06415 BPG-independent PGAM N-terminus (iPGM_N) COP00_11985 PF00121 Triosephosphate isomerase COP00_11990 PF00162 Phosphoglycerate kinase COP00_11995 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain COP00_11995 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain COP00_12000 PF04198 Putative sugar-binding domain COP00_12010 PF00296 Luciferase-like monooxygenase COP00_12015 PF00324 Amino acid permease COP00_12025 PF01161 Phosphatidylethanolamine-binding protein COP00_12030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family COP00_12030 PF03466 LysR substrate binding domain COP00_12045 PF00072 Response regulator receiver domain COP00_12045 PF00196 Bacterial regulatory proteins, luxR family COP00_12055 PF00005 ABC transporter COP00_12065 PF06445 GyrI-like small molecule binding domain COP00_12065 PF13411 MerR HTH family regulatory protein COP00_12070 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain COP00_12070 PF02129 X-Pro dipeptidyl-peptidase (S15 family) COP00_12080 PF11870 Domain of unknown function (DUF3390) COP00_12080 PF02589 LUD domain COP00_12080 PF13183 4Fe-4S dicluster domain COP00_12085 PF02754 Cysteine-rich domain COP00_12090 PF00392 Bacterial regulatory proteins, gntR family COP00_12090 PF07729 FCD domain COP00_12095 PF02652 L-lactate permease COP00_12100 PF04963 Sigma-54 factor, core binding domain COP00_12100 PF00309 Sigma-54 factor, Activator interacting domain (AID) COP00_12100 PF04552 Sigma-54, DNA binding domain COP00_12105 PF09628 YvfG protein COP00_12110 PF04230 Polysaccharide pyruvyl transferase COP00_12115 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family COP00_12120 PF17836 PglD N-terminal domain COP00_12120 PF00132 Bacterial transferase hexapeptide (six repeats) COP00_12125 PF02397 Bacterial sugar transferase COP00_12130 PF01943 Polysaccharide biosynthesis protein COP00_12130 PF14667 Polysaccharide biosynthesis C-terminal domain COP00_12135 PF00535 Glycosyl transferase family 2 COP00_12140 PF04230 Polysaccharide pyruvyl transferase COP00_12145 PF00535 Glycosyl transferase family 2 COP00_12155 PF13439 Glycosyltransferase Family 4 COP00_12155 PF00534 Glycosyl transferases group 1 COP00_12160 PF00535 Glycosyl transferase family 2 COP00_12165 PF13439 Glycosyltransferase Family 4 COP00_12165 PF00534 Glycosyl transferases group 1 COP00_12170 PF02719 Polysaccharide biosynthesis protein COP00_12175 PF13614 AAA domain COP00_12180 PF02706 Chain length determinant protein COP00_12185 PF01381 Helix-turn-helix COP00_12185 PF08671 Anti-repressor SinI COP00_12190 PF02525 Flavodoxin-like fold COP00_12195 PF07690 Major Facilitator Superfamily COP00_12200 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain COP00_12200 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain COP00_12200 PF01842 ACT domain COP00_12205 PF04166 Pyridoxal phosphate biosynthetic protein PdxA COP00_12210 PF17042 Nucleotide-binding C-terminal domain COP00_12210 PF07005 Sugar-binding N-terminal domain COP00_12215 PF00465 Iron-containing alcohol dehydrogenase COP00_12220 PF00701 Dihydrodipicolinate synthetase family COP00_12225 PF00072 Response regulator receiver domain COP00_12225 PF00158 Sigma-54 interaction domain COP00_12225 PF02954 Bacterial regulatory protein, Fis family COP00_12230 PF01638 HxlR-like helix-turn-helix COP00_12235 PF00724 NADH:flavin oxidoreductase / NADH oxidase family COP00_12240 PF02435 Levansucrase/Invertase COP00_12245 PF08244 Glycosyl hydrolases family 32 C terminal COP00_12245 PF00251 Glycosyl hydrolases family 32 N-terminal domain COP00_12265 PF18801 response regulator aspartate phosphatase H, N terminal COP00_12270 PF04740 LXG domain of WXG superfamily COP00_12270 PF14410 HNH/ENDO VII superfamily nuclease with conserved GHE residues COP00_12270 PF14449 Pre-toxin TG COP00_12310 PF01476 LysM domain COP00_12310 PF01471 Putative peptidoglycan binding domain COP00_12310 PF01510 N-acetylmuramoyl-L-alanine amidase COP00_12330 PF11962 Peptidase_G2, IMC autoproteolytic cleavage domain COP00_12330 PF12708 Pectate lyase superfamily protein COP00_12345 PF01464 Transglycosylase SLT domain COP00_12380 PF00041 Fibronectin type III domain COP00_12380 PF03065 Glycosyl hydrolase family 57 COP00_12380 PF03423 Carbohydrate binding domain (family 25) COP00_12390 PF00574 Clp protease COP00_12445 PF01381 Helix-turn-helix COP00_12445 PF00717 Peptidase S24-like COP00_12460 PF01068 ATP dependent DNA ligase domain COP00_12500 PF00145 C-5 cytosine-specific DNA methylase COP00_12520 PF06725 3D domain COP00_12525 PF02511 Thymidylate synthase complementing protein COP00_12535 PF00692 dUTPase COP00_12545 PF00268 Ribonucleotide reductase, small chain COP00_12560 PF00317 Ribonucleotide reductase, all-alpha domain COP00_12560 PF02867 Ribonucleotide reductase, barrel domain COP00_12560 PF08343 Ribonucleotide reductase N-terminal COP00_12565 PF07972 NrdI Flavodoxin like COP00_12590 PF02075 Crossover junction endodeoxyribonuclease RuvC COP00_12605 PF01612 3'-5' exonuclease COP00_12605 PF00476 DNA polymerase family A COP00_12605 PF01367 5'-3' exonuclease, C-terminal SAM fold COP00_12605 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain COP00_12640 PF01381 Helix-turn-helix COP00_12720 PF02899 Phage integrase, N-terminal SAM-like domain COP00_12720 PF00589 Phage integrase family COP00_12730 PF00574 Clp protease COP00_12735 PF01965 DJ-1/PfpI family COP00_12735 PF12833 Helix-turn-helix domain COP00_12745 PF03819 MazG nucleotide pyrophosphohydrolase domain COP00_12750 PF01966 HD domain COP00_12755 PF01740 STAS domain COP00_12755 PF00916 Sulfate permease family COP00_12760 PF00484 Carbonic anhydrase COP00_12765 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain COP00_12765 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain COP00_12770 PF01613 Flavin reductase like domain COP00_12780 PF02687 FtsX-like permease family COP00_12785 PF00005 ABC transporter COP00_12790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase COP00_12795 PF00486 Transcriptional regulatory protein, C terminal COP00_12795 PF00072 Response regulator receiver domain COP00_12805 PF00797 N-acetyltransferase COP00_12810 PF00381 PTS HPr component phosphorylation site COP00_12815 PF02650 WhiA C-terminal HTH domain COP00_12815 PF14527 WhiA LAGLIDADG-like domain COP00_12815 PF10298 WhiA N-terminal LAGLIDADG-like domain COP00_12820 PF01933 Uncharacterised protein family UPF0052 COP00_12825 PF03668 P-loop ATPase protein family COP00_12830 PF00293 NUDIX domain COP00_12835 PF07992 Pyridine nucleotide-disulphide oxidoreductase COP00_12845 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase COP00_12845 PF01502 Phosphoribosyl-AMP cyclohydrolase COP00_12850 PF00977 Histidine biosynthesis protein COP00_12855 PF00977 Histidine biosynthesis protein COP00_12860 PF00117 Glutamine amidotransferase class-I COP00_12865 PF00475 Imidazoleglycerol-phosphate dehydratase COP00_12870 PF00815 Histidinol dehydrogenase COP00_12875 PF01634 ATP phosphoribosyltransferase COP00_12880 PF13393 Histidyl-tRNA synthetase COP00_12885 PF13529 Peptidase_C39 like family COP00_12895 PF03211 Pectate lyase COP00_12900 PF14602 Hexapeptide repeat of succinyl-transferase COP00_12905 PF13419 Haloacid dehalogenase-like hydrolase COP00_12910 PF07670 Nucleoside recognition COP00_12915 PF01790 Prolipoprotein diacylglyceryl transferase COP00_12920 PF02603 HPr Serine kinase N terminus COP00_12920 PF07475 HPr Serine kinase C-terminal domain COP00_12925 PF01047 MarR family COP00_12930 PF07690 Major Facilitator Superfamily COP00_12935 PF00149 Calcineurin-like phosphoesterase COP00_12940 PF04020 Mycobacterial 4 TMS phage holin, superfamily IV COP00_12950 PF13349 Putative adhesin COP00_12965 PF00005 ABC transporter COP00_12965 PF17760 UvrA interaction domain COP00_12965 PF17755 UvrA DNA-binding domain COP00_12970 PF00271 Helicase conserved C-terminal domain COP00_12970 PF04851 Type III restriction enzyme, res subunit COP00_12970 PF02151 UvrB/uvrC motif COP00_12970 PF12344 Ultra-violet resistance protein B COP00_12970 PF17757 UvrB interaction domain COP00_12975 PF09964 Uncharacterized protein conserved in bacteria (DUF2198) COP00_12990 PF17423 Swarming motility protein COP00_12995 PF03572 Peptidase family S41 COP00_12995 PF01471 Putative peptidoglycan binding domain COP00_12995 PF17820 PDZ domain COP00_13000 PF00180 Isocitrate/isopropylmalate dehydrogenase COP00_13005 PF00877 NlpC/P60 family COP00_13010 PF18075 FtsX extracellular domain COP00_13010 PF02687 FtsX-like permease family COP00_13015 PF00005 ABC transporter COP00_13020 PF13442 Cytochrome C oxidase, cbb3-type, subunit III COP00_13025 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 COP00_13025 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) COP00_13035 PF01043 SecA preprotein cross-linking domain COP00_13035 PF07516 SecA Wing and Scaffold domain COP00_13035 PF02810 SEC-C motif COP00_13035 PF07517 SecA DEAD-like domain COP00_13040 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein COP00_13040 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus COP00_13055 PF02561 Flagellar protein FliS COP00_13060 PF07196 Flagellin hook IN motif COP00_13060 PF07195 Flagellar hook-associated protein 2 C-terminus COP00_13060 PF02465 Flagellar hook-associated protein 2 N-terminus COP00_13065 PF03646 FlaG protein COP00_13070 PF00700 Bacterial flagellin C-terminal helical region COP00_13070 PF00669 Bacterial flagellin N-terminal helical region COP00_13075 PF02599 Global regulator protein family COP00_13080 PF02623 FliW protein COP00_13090 PF00700 Bacterial flagellin C-terminal helical region COP00_13090 PF00669 Bacterial flagellin N-terminal helical region COP00_13095 PF00460 Flagella basal body rod protein COP00_13095 PF06429 Flagellar basal body rod FlgEFG protein C-terminal COP00_13100 PF05130 FlgN protein COP00_13105 PF04316 Anti-sigma-28 factor, FlgM COP00_13120 PF10719 Late competence development protein ComFB COP00_13125 PF00271 Helicase conserved C-terminal domain COP00_13125 PF04851 Type III restriction enzyme, res subunit COP00_13130 PF02645 Uncharacterised protein, DegV family COG1307 COP00_13135 PF00196 Bacterial regulatory proteins, luxR family COP00_13135 PF00072 Response regulator receiver domain COP00_13140 PF07730 Histidine kinase COP00_13140 PF05384 Sensor protein DegS COP00_13140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase COP00_13145 PF09186 Domain of unknown function (DUF1949) COP00_13145 PF01205 Uncharacterized protein family UPF0029 COP00_13150 PF03816 Cell envelope-related transcriptional attenuator domain COP00_13155 PF00953 Glycosyl transferase family 4 COP00_13165 PF00535 Glycosyl transferase family 2 COP00_13170 PF02706 Chain length determinant protein COP00_13175 PF04932 O-Antigen ligase COP00_13180 PF16363 GDP-mannose 4,6 dehydratase COP00_13185 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain COP00_13185 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain COP00_13185 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain COP00_13190 PF00534 Glycosyl transferases group 1 COP00_13190 PF13439 Glycosyltransferase Family 4 COP00_13195 PF01943 Polysaccharide biosynthesis protein COP00_13195 PF14667 Polysaccharide biosynthesis C-terminal domain COP00_13200 PF02397 Bacterial sugar transferase COP00_13205 PF01520 N-acetylmuramoyl-L-alanine amidase COP00_13205 PF04122 Putative cell wall binding repeat 2 COP00_13210 PF04122 Putative cell wall binding repeat 2 COP00_13210 PF08486 Stage II sporulation protein COP00_13220 PF03816 Cell envelope-related transcriptional attenuator domain COP00_13225 PF02350 UDP-N-acetylglucosamine 2-epimerase COP00_13230 PF00483 Nucleotidyl transferase COP00_13235 PF00005 ABC transporter COP00_13240 PF01061 ABC-2 type transporter COP00_13245 PF00535 Glycosyl transferase family 2 COP00_13250 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family COP00_13260 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase COP00_13265 PF16363 GDP-mannose 4,6 dehydratase COP00_13270 PF00483 Nucleotidyl transferase COP00_13275 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase COP00_13280 PF18674 TarS beta-glycosyltransferase C-terminal domain 1 COP00_13280 PF00535 Glycosyl transferase family 2 COP00_13285 PF01467 Cytidylyltransferase-like COP00_13290 PF03808 Glycosyl transferase WecB/TagA/CpsF family COP00_13295 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase COP00_13300 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase COP00_13300 PF05036 Sporulation related domain COP00_13300 PF08239 Bacterial SH3 domain COP00_13305 PF01238 Phosphomannose isomerase type I COP00_13310 PF04055 Radical SAM superfamily COP00_13315 PF03477 ATP cone domain COP00_13315 PF13597 Anaerobic ribonucleoside-triphosphate reductase COP00_13320 PF03812 2-keto-3-deoxygluconate permease COP00_13325 PF01081 KDPG and KHG aldolase COP00_13330 PF00294 pfkB family carbohydrate kinase COP00_13335 PF00356 Bacterial regulatory proteins, lacI family COP00_13340 PF04962 KduI/IolB family COP00_13350 PF08240 Alcohol dehydrogenase GroES-like domain COP00_13350 PF13823 Alcohol dehydrogenase GroES-associated COP00_13350 PF00107 Zinc-binding dehydrogenase COP00_13355 PF00083 Sugar (and other) transporter COP00_13360 PF03816 Cell envelope-related transcriptional attenuator domain COP00_13370 PF00877 NlpC/P60 family COP00_13380 PF09587 Bacterial capsule synthesis protein PGA_cap COP00_13385 PF14102 Capsule biosynthesis CapC COP00_13390 PF08245 Mur ligase middle domain COP00_13395 PF00356 Bacterial regulatory proteins, lacI family COP00_13400 PF00294 pfkB family carbohydrate kinase COP00_13405 PF05025 RbsD / FucU transport protein family COP00_13410 PF00005 ABC transporter COP00_13415 PF02653 Branched-chain amino acid transport system / permease component COP00_13420 PF13407 Periplasmic binding protein domain COP00_13425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family COP00_13425 PF03466 LysR substrate binding domain COP00_13430 PF08241 Methyltransferase domain COP00_13435 PF03306 Alpha-acetolactate decarboxylase COP00_13440 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain COP00_13440 PF00205 Thiamine pyrophosphate enzyme, central domain COP00_13440 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain COP00_13455 PF01037 Lrp/AsnC ligand binding domain COP00_13455 PF13404 AsnC-type helix-turn-helix domain COP00_13460 PF02417 Chromate transporter COP00_13465 PF02417 Chromate transporter COP00_13470 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain COP00_13470 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain COP00_13470 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain COP00_13480 PF13807 G-rich domain on putative tyrosine kinase COP00_13480 PF02706 Chain length determinant protein COP00_13490 PF04434 SWIM zinc finger COP00_13495 PF12419 SNF2 Helicase protein COP00_13495 PF00176 SNF2 family N-terminal domain COP00_13495 PF00271 Helicase conserved C-terminal domain COP00_13500 PF00547 Urease, gamma subunit COP00_13505 PF00699 Urease beta subunit COP00_13510 PF00449 Urease alpha-subunit, N-terminal domain COP00_13510 PF01979 Amidohydrolase family COP00_13520 PF08220 DeoR-like helix-turn-helix domain COP00_13520 PF00455 DeoR C terminal sensor domain COP00_13525 PF00436 Single-strand binding protein family COP00_13535 PF14183 YwpF-like protein COP00_13540 PF01741 Large-conductance mechanosensitive channel, MscL COP00_13545 PF07977 FabA-like domain COP00_13550 PF00460 Flagella basal body rod protein COP00_13550 PF06429 Flagellar basal body rod FlgEFG protein C-terminal COP00_13555 PF06429 Flagellar basal body rod FlgEFG protein C-terminal COP00_13555 PF00460 Flagella basal body rod protein COP00_13565 PF12116 Stage III sporulation protein D COP00_13575 PF01047 MarR family COP00_13580 PF07690 Major Facilitator Superfamily COP00_13585 PF01569 PAP2 superfamily COP00_13590 PF02833 DHHA2 domain COP00_13590 PF01368 DHH family COP00_13600 PF09844 Uncharacterized conserved protein (COG2071) COP00_13605 PF00571 CBS domain COP00_13610 PF01544 CorA-like Mg2+ transporter protein COP00_13615 PF00571 CBS domain COP00_13615 PF01595 Cyclin M transmembrane N-terminal domain COP00_13615 PF03471 Transporter associated domain COP00_13620 PF00909 Ammonium Transporter Family COP00_13625 PF00543 Nitrogen regulatory protein P-II COP00_13635 PF00574 Clp protease COP00_13645 PF01551 Peptidase family M23 COP00_13650 PF00583 Acetyltransferase (GNAT) family COP00_13655 PF17370 Family of unknown function (DUF5392) COP00_13660 PF13091 PLD-like domain COP00_13660 PF13396 Phospholipase_D-nuclease N-terminal COP00_13665 PF07690 Major Facilitator Superfamily COP00_13670 PF03621 MbtH-like protein COP00_13680 PF00857 Isochorismatase family COP00_13680 PF00550 Phosphopantetheine attachment site COP00_13685 PF13193 AMP-binding enzyme C-terminal domain COP00_13685 PF00501 AMP-binding enzyme COP00_13690 PF00425 chorismate binding enzyme COP00_13700 PF00756 Putative esterase COP00_13705 PF01032 FecCD transport family COP00_13710 PF01032 FecCD transport family COP00_13715 PF01497 Periplasmic binding protein COP00_13720 PF01497 Periplasmic binding protein COP00_13720 PF12833 Helix-turn-helix domain COP00_13725 PF17319 Family of unknown function (DUF5362) COP00_13730 PF13460 NAD(P)H-binding COP00_13735 PF02082 Transcriptional regulator COP00_13745 PF06463 Molybdenum Cofactor Synthesis C COP00_13745 PF04055 Radical SAM superfamily COP00_13750 PF02634 FdhD/NarQ family COP00_13755 PF07690 Major Facilitator Superfamily COP00_13765 PF00092 von Willebrand factor type A domain COP00_13770 PF00092 von Willebrand factor type A domain COP00_13775 PF08486 Stage II sporulation protein COP00_13780 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) COP00_13785 PF08680 TATA-box binding COP00_13790 PF06612 Protein of unknown function (DUF1146) COP00_13795 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain COP00_13795 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain COP00_13800 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain COP00_13800 PF02874 ATP synthase alpha/beta family, beta-barrel domain COP00_13805 PF00231 ATP synthase COP00_13810 PF02874 ATP synthase alpha/beta family, beta-barrel domain COP00_13810 PF00306 ATP synthase alpha/beta chain, C terminal domain COP00_13810 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain COP00_13815 PF00213 ATP synthase delta (OSCP) subunit COP00_13820 PF00430 ATP synthase B/B' CF(0) COP00_13825 PF00137 ATP synthase subunit C COP00_13830 PF00119 ATP synthase A chain COP00_13835 PF03899 ATP synthase I chain COP00_13850 PF00464 Serine hydroxymethyltransferase COP00_13855 PF04260 Protein of unknown function (DUF436) COP00_13860 PF02502 Ribose/Galactose Isomerase COP00_13865 PF01451 Low molecular weight phosphotyrosine protein phosphatase COP00_13870 PF02659 Putative manganese efflux pump COP00_13875 PF03481 Putative GTP-binding controlling metal-binding COP00_13875 PF01300 Telomere recombination COP00_13885 PF09551 Stage II sporulation protein R (spore_II_R) COP00_13890 PF07690 Major Facilitator Superfamily COP00_13895 PF02894 Oxidoreductase family, C-terminal alpha/beta domain COP00_13895 PF01408 Oxidoreductase family, NAD-binding Rossmann fold COP00_13900 PF05116 Sucrose-6F-phosphate phosphohydrolase COP00_13905 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family COP00_13910 PF00356 Bacterial regulatory proteins, lacI family COP00_13915 PF17827 PrmC N-terminal domain COP00_13915 PF05175 Methyltransferase small domain COP00_13920 PF00472 RF-1 domain COP00_13920 PF03462 PCRF domain COP00_13925 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily COP00_13930 PF13411 MerR HTH family regulatory protein COP00_13935 PF03547 Membrane transport protein COP00_13940 PF03949 Malic enzyme, NAD binding domain COP00_13940 PF00390 Malic enzyme, N-terminal domain COP00_13945 PF00265 Thymidine kinase COP00_13950 PF01197 Ribosomal protein L31 COP00_13955 PF07497 Rho termination factor, RNA-binding domain COP00_13955 PF07498 Rho termination factor, N-terminal domain COP00_13955 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain COP00_13960 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded COP00_13965 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) COP00_13970 PF00923 Transaldolase/Fructose-6-phosphate aldolase COP00_13975 PF01116 Fructose-bisphosphate aldolase class-II COP00_13980 PF00072 Response regulator receiver domain COP00_13985 PF10740 Domain of unknown function (DUF2529) COP00_13990 PF06418 CTP synthase N-terminus COP00_13990 PF00117 Glutamine amidotransferase class-I COP00_13995 PF05066 HB1, ASXL, restriction endonuclease HTH domain COP00_14005 PF02770 Acyl-CoA dehydrogenase, middle domain COP00_14005 PF02771 Acyl-CoA dehydrogenase, N-terminal domain COP00_14005 PF00441 Acyl-CoA dehydrogenase, C-terminal domain COP00_14010 PF02771 Acyl-CoA dehydrogenase, N-terminal domain COP00_14010 PF02770 Acyl-CoA dehydrogenase, middle domain COP00_14010 PF00441 Acyl-CoA dehydrogenase, C-terminal domain COP00_14015 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain COP00_14015 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain COP00_14020 PF00108 Thiolase, N-terminal domain COP00_14020 PF02803 Thiolase, C-terminal domain COP00_14025 PF02754 Cysteine-rich domain COP00_14025 PF13183 4Fe-4S dicluster domain COP00_14040 PF00750 tRNA synthetases class I (R) COP00_14040 PF05746 DALR anticodon binding domain COP00_14040 PF03485 Arginyl tRNA synthetase N terminal domain COP00_14045 PF09148 Domain of unknown function (DUF1934) COP00_14050 PF00491 Arginase family COP00_14055 PF17284 Spermidine synthase tetramerisation domain COP00_14060 PF00912 Transglycosylase COP00_14060 PF00905 Penicillin binding protein transpeptidase domain COP00_14070 PF02163 Peptidase family M50 COP00_14075 PF01361 Tautomerase enzyme COP00_14090 PF01966 HD domain COP00_14095 PF07293 Protein of unknown function (DUF1450) COP00_14105 PF14154 Domain of unknown function (DUF4306) COP00_14110 PF03099 Biotin/lipoate A/B protein ligase family COP00_14115 PF01494 FAD binding domain COP00_14120 PF07690 Major Facilitator Superfamily COP00_14130 PF01361 Tautomerase enzyme COP00_14145 PF01614 Bacterial transcriptional regulator COP00_14145 PF09339 IclR helix-turn-helix domain COP00_14155 PF01515 Phosphate acetyl/butaryl transferase COP00_14165 PF17735 Biofilm surface layer A COP00_14170 PF09671 Spore coat protein (Spore_GerQ) COP00_14185 PF00005 ABC transporter COP00_14195 PF00072 Response regulator receiver domain COP00_14195 PF00196 Bacterial regulatory proteins, luxR family COP00_14200 PF04241 Protein of unknown function (DUF423) COP00_14205 PF00860 Permease family COP00_14210 PF17261 Family of unknown function (DUF5327) COP00_14215 PF03167 Uracil DNA glycosylase superfamily COP00_14220 PF00535 Glycosyl transferase family 2 COP00_14225 PF08543 Phosphomethylpyrimidine kinase COP00_14235 PF08244 Glycosyl hydrolases family 32 C terminal COP00_14235 PF00251 Glycosyl hydrolases family 32 N-terminal domain COP00_14240 PF00367 phosphotransferase system, EIIB COP00_14240 PF02378 Phosphotransferase system, EIIC COP00_14245 PF00874 PRD domain COP00_14245 PF03123 CAT RNA binding domain COP00_14255 PF00082 Subtilase family COP00_14255 PF13860 FlgD Ig-like domain COP00_14255 PF02225 PA domain COP00_14255 PF05922 Peptidase inhibitor I9 COP00_14265 PF00296 Luciferase-like monooxygenase COP00_14270 PF00881 Nitroreductase family COP00_14275 PF01546 Peptidase family M20/M25/M40 COP00_14275 PF07687 Peptidase dimerisation domain COP00_14280 PF01098 Cell cycle protein COP00_14285 PF01098 Cell cycle protein COP00_14295 PF17368 Spore morphogenesis and germination YwcE COP00_14300 PF00005 ABC transporter COP00_14305 PF00005 ABC transporter COP00_14330 PF00196 Bacterial regulatory proteins, luxR family COP00_14330 PF00072 Response regulator receiver domain COP00_14335 PF03626 Prokaryotic Cytochrome C oxidase subunit IV COP00_14340 PF00510 Cytochrome c oxidase subunit III COP00_14345 PF00115 Cytochrome C and Quinol oxidase polypeptide I COP00_14350 PF00116 Cytochrome C oxidase subunit II, periplasmic domain COP00_14350 PF02790 Cytochrome C oxidase subunit II, transmembrane domain COP00_14355 PF16363 GDP-mannose 4,6 dehydratase COP00_14375 PF03358 NADPH-dependent FMN reductase COP00_14380 PF04341 Protein of unknown function, DUF485 COP00_14385 PF00474 Sodium:solute symporter family COP00_14390 PF00370 FGGY family of carbohydrate kinases, N-terminal domain COP00_14390 PF02782 FGGY family of carbohydrate kinases, C-terminal domain COP00_14395 PF01261 Xylose isomerase-like TIM barrel COP00_14400 PF00480 ROK family COP00_14405 PF02581 Thiamine monophosphate synthase COP00_14410 PF02110 Hydroxyethylthiazole kinase family COP00_14415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family COP00_14415 PF03466 LysR substrate binding domain COP00_14425 PF16888 Domain of unknown function (DUF5082) COP00_14430 PF03788 LrgA family COP00_14435 PF04172 LrgB-like family COP00_14440 PF00474 Sodium:solute symporter family COP00_14445 PF17785 PUA-like domain COP00_14445 PF10672 S-adenosylmethionine-dependent methyltransferase COP00_14450 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily COP00_14455 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain COP00_14455 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain COP00_14460 PF01501 Glycosyl transferase family 8 COP00_14465 PF09529 Integral membrane protein (intg_mem_TP0381) COP00_14470 PF07690 Major Facilitator Superfamily COP00_14475 PF13378 Enolase C-terminal domain-like COP00_14475 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain COP00_14480 PF01081 KDPG and KHG aldolase COP00_14485 PF00294 pfkB family carbohydrate kinase COP00_14490 PF09339 IclR helix-turn-helix domain COP00_14490 PF01614 Bacterial transcriptional regulator COP00_14495 PF04389 Peptidase family M28 COP00_14495 PF02225 PA domain COP00_14515 PF07690 Major Facilitator Superfamily COP00_14520 PF00857 Isochorismatase family COP00_14525 PF04607 Region found in RelA / SpoT proteins COP00_14535 PF12459 D-Ala-teichoic acid biosynthesis protein COP00_14540 PF00501 AMP-binding enzyme COP00_14540 PF13193 AMP-binding enzyme C-terminal domain COP00_14545 PF03062 MBOAT, membrane-bound O-acyltransferase family COP00_14550 PF00550 Phosphopantetheine attachment site COP00_14555 PF04914 DltD protein COP00_14560 PF01063 Amino-transferase class IV COP00_14565 PF07690 Major Facilitator Superfamily COP00_14570 PF11975 Family 4 glycosyl hydrolase C-terminal domain COP00_14570 PF02056 Family 4 glycosyl hydrolase COP00_14575 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit COP00_14580 PF02378 Phosphotransferase system, EIIC COP00_14585 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit COP00_14590 PF05043 Mga helix-turn-helix domain COP00_14590 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 COP00_14590 PF00874 PRD domain COP00_14590 PF08279 HTH domain COP00_14595 PF02245 Methylpurine-DNA glycosylase (MPG) COP00_14600 PF02350 UDP-N-acetylglucosamine 2-epimerase COP00_14605 PF08485 Polysaccharide biosynthesis protein C-terminal COP00_14605 PF02719 Polysaccharide biosynthesis protein COP00_14615 PF07729 FCD domain COP00_14615 PF00392 Bacterial regulatory proteins, gntR family COP00_14620 PF00285 Citrate synthase, C-terminal domain COP00_14625 PF03972 MmgE/PrpD family COP00_14635 PF00664 ABC transporter transmembrane region COP00_14635 PF00005 ABC transporter COP00_14640 PF13472 GDSL-like Lipase/Acylhydrolase family COP00_14645 PF17735 Biofilm surface layer A COP00_14650 PF17735 Biofilm surface layer A COP00_14660 PF12679 ABC-2 family transporter protein COP00_14665 PF13732 Domain of unknown function (DUF4162) COP00_14665 PF00005 ABC transporter COP00_14685 PF08281 Sigma-70, region 4 COP00_14685 PF04542 Sigma-70 region 2 COP00_14690 PF07690 Major Facilitator Superfamily COP00_14700 PF06628 Catalase-related immune-responsive COP00_14700 PF00199 Catalase COP00_14705 PF01475 Ferric uptake regulator family COP00_14715 PF00544 Pectate lyase COP00_14720 PF01256 Carbohydrate kinase COP00_14725 PF04235 Protein of unknown function (DUF418) COP00_14730 PF00664 ABC transporter transmembrane region COP00_14730 PF00005 ABC transporter COP00_14735 PF00664 ABC transporter transmembrane region COP00_14735 PF00005 ABC transporter COP00_14740 PF02322 Cytochrome bd terminal oxidase subunit II COP00_14745 PF01654 Cytochrome bd terminal oxidase subunit I COP00_14755 PF01226 Formate/nitrite transporter COP00_14765 PF03949 Malic enzyme, NAD binding domain COP00_14765 PF00390 Malic enzyme, N-terminal domain COP00_14765 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain COP00_14770 PF03553 Na+/H+ antiporter family COP00_14775 PF10415 Fumarase C C-terminus COP00_14775 PF00206 Lyase COP00_14780 PF00710 Asparaginase, N-terminal COP00_14780 PF17763 Glutaminase/Asparaginase C-terminal domain COP00_14785 PF01381 Helix-turn-helix COP00_14790 PF10282 Lactonase, 7-bladed beta-propeller COP00_14795 PF00486 Transcriptional regulatory protein, C terminal COP00_14795 PF00072 Response regulator receiver domain COP00_14800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase COP00_14805 PF00005 ABC transporter COP00_14810 PF02687 FtsX-like permease family COP00_14815 PF06486 Protein of unknown function (DUF1093) COP00_14830 PF01522 Polysaccharide deacetylase COP00_14835 PF00392 Bacterial regulatory proteins, gntR family COP00_14835 PF00155 Aminotransferase class I and II COP00_14845 PF07238 PilZ domain COP00_14845 PF03170 Bacterial cellulose synthase subunit COP00_14845 PF03552 Cellulose synthase COP00_14845 PF00535 Glycosyl transferase family 2 COP00_14850 PF03390 2-hydroxycarboxylate transporter family COP00_14855 PF03009 Glycerophosphoryl diester phosphodiesterase family COP00_14860 PF05901 Excalibur calcium-binding domain COP00_14875 PF14449 Pre-toxin TG COP00_14875 PF14431 YwqJ-like deaminase COP00_14875 PF04740 LXG domain of WXG superfamily COP00_14885 PF00884 Sulfatase COP00_14895 PF17353 Family of unknown function (DUF5381) COP00_14900 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 COP00_14900 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) COP00_14905 PF02863 Arginine repressor, C-terminal domain COP00_14905 PF01316 Arginine repressor, DNA binding domain COP00_14920 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain COP00_14920 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain COP00_14925 PF13520 Amino acid permease COP00_14930 PF00696 Amino acid kinase family COP00_14950 PF00005 ABC transporter COP00_14955 PF00486 Transcriptional regulatory protein, C terminal COP00_14955 PF00072 Response regulator receiver domain COP00_14960 PF00512 His Kinase A (phospho-acceptor) domain COP00_14960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase COP00_14965 PF00232 Glycosyl hydrolase family 1 COP00_14970 PF02378 Phosphotransferase system, EIIC COP00_14980 PF01546 Peptidase family M20/M25/M40 COP00_14980 PF07687 Peptidase dimerisation domain COP00_14985 PF00294 pfkB family carbohydrate kinase COP00_14990 PF00251 Glycosyl hydrolases family 32 N-terminal domain COP00_14990 PF08244 Glycosyl hydrolases family 32 C terminal COP00_14995 PF01306 LacY proton/sugar symporter COP00_15000 PF00356 Bacterial regulatory proteins, lacI family COP00_15015 PF01717 Cobalamin-independent synthase, Catalytic domain COP00_15020 PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase COP00_15025 PF00535 Glycosyl transferase family 2 COP00_15030 PF16363 GDP-mannose 4,6 dehydratase COP00_15040 PF07662 Na+ dependent nucleoside transporter C-terminus COP00_15040 PF01773 Na+ dependent nucleoside transporter N-terminus COP00_15045 PF01381 Helix-turn-helix COP00_15055 PF18011 C-terminal domain found in long catalases COP00_15055 PF06628 Catalase-related immune-responsive COP00_15055 PF00199 Catalase COP00_15060 PF03600 Citrate transporter COP00_15065 PF00232 Glycosyl hydrolase family 1 COP00_15070 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 COP00_15070 PF00367 phosphotransferase system, EIIB COP00_15070 PF02378 Phosphotransferase system, EIIC COP00_15075 PF00874 PRD domain COP00_15075 PF03123 CAT RNA binding domain COP00_15080 PF02361 Cobalt transport protein COP00_15085 PF00005 ABC transporter COP00_15095 PF03070 TENA/THI-4/PQQC family COP00_15105 PF00463 Isocitrate lyase family COP00_15110 PF01274 Malate synthase COP00_15125 PF02687 FtsX-like permease family COP00_15130 PF00005 ABC transporter COP00_15135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase COP00_15140 PF00072 Response regulator receiver domain COP00_15140 PF00486 Transcriptional regulatory protein, C terminal COP00_15145 PF00232 Glycosyl hydrolase family 1 COP00_15150 PF02378 Phosphotransferase system, EIIC COP00_15150 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 COP00_15150 PF00367 phosphotransferase system, EIIB COP00_15160 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family COP00_15165 PF04616 Glycosyl hydrolases family 43 COP00_15165 PF16369 C-terminal lipocalin-like domain COP00_15170 PF00271 Helicase conserved C-terminal domain COP00_15170 PF03880 DbpA RNA binding domain COP00_15170 PF00270 DEAD/DEAH box helicase COP00_15180 PF00591 Glycosyl transferase family, a/b domain COP00_15180 PF02885 Glycosyl transferase family, helical bundle domain COP00_15180 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain COP00_15185 PF01773 Na+ dependent nucleoside transporter N-terminus COP00_15185 PF07662 Na+ dependent nucleoside transporter C-terminus COP00_15190 PF01791 DeoC/LacD family aldolase COP00_15195 PF04198 Putative sugar-binding domain COP00_15200 PF18801 response regulator aspartate phosphatase H, N terminal COP00_15210 PF00990 Diguanylate cyclase, GGDEF domain COP00_15215 PF10096 Uncharacterized protein conserved in bacteria (DUF2334) COP00_15225 PF03170 Bacterial cellulose synthase subunit COP00_15245 PF07478 D-ala D-ala ligase C-terminus COP00_15255 PF01116 Fructose-bisphosphate aldolase class-II COP00_15260 PF01261 Xylose isomerase-like TIM barrel COP00_15265 PF01261 Xylose isomerase-like TIM barrel COP00_15270 PF02894 Oxidoreductase family, C-terminal alpha/beta domain COP00_15270 PF01408 Oxidoreductase family, NAD-binding Rossmann fold COP00_15275 PF07690 Major Facilitator Superfamily COP00_15280 PF01261 Xylose isomerase-like TIM barrel COP00_15285 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain COP00_15285 PF00205 Thiamine pyrophosphate enzyme, central domain COP00_15285 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain COP00_15290 PF00294 pfkB family carbohydrate kinase COP00_15295 PF04962 KduI/IolB family COP00_15300 PF00171 Aldehyde dehydrogenase family COP00_15305 PF00455 DeoR C terminal sensor domain COP00_15305 PF08220 DeoR-like helix-turn-helix domain COP00_15310 PF00248 Aldo/keto reductase family COP00_15320 PF07690 Major Facilitator Superfamily COP00_15325 PF00183 Hsp90 protein COP00_15330 PF00005 ABC transporter COP00_15330 PF12848 ABC transporter COP00_15355 PF01497 Periplasmic binding protein COP00_15375 PF17910 FeoB cytosolic helical domain COP00_15375 PF02421 Ferrous iron transport protein B COP00_15375 PF07670 Nucleoside recognition COP00_15375 PF07664 Ferrous iron transport protein B C terminus COP00_15385 PF01757 Acyltransferase family COP00_15390 PF02687 FtsX-like permease family COP00_15395 PF00005 ABC transporter COP00_15400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase COP00_15405 PF00072 Response regulator receiver domain COP00_15405 PF00486 Transcriptional regulatory protein, C terminal COP00_15420 PF07745 Glycosyl hydrolase family 53 COP00_15425 PF08533 Beta-galactosidase C-terminal domain COP00_15425 PF08532 Beta-galactosidase trimerisation domain COP00_15425 PF02449 Beta-galactosidase COP00_15430 PF00528 Binding-protein-dependent transport system inner membrane component COP00_15435 PF00528 Binding-protein-dependent transport system inner membrane component COP00_15440 PF13416 Bacterial extracellular solute-binding protein COP00_15445 PF00356 Bacterial regulatory proteins, lacI family COP00_15455 PF16363 GDP-mannose 4,6 dehydratase COP00_15465 PF00480 ROK family COP00_15465 PF01325 Iron dependent repressor, N-terminal DNA binding domain COP00_15470 PF07729 FCD domain COP00_15470 PF00392 Bacterial regulatory proteins, gntR family COP00_15475 PF00370 FGGY family of carbohydrate kinases, N-terminal domain COP00_15475 PF02782 FGGY family of carbohydrate kinases, C-terminal domain COP00_15485 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain COP00_15485 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase COP00_15490 PF00171 Aldehyde dehydrogenase family COP00_15490 PF00465 Iron-containing alcohol dehydrogenase COP00_15500 PF00578 AhpC/TSA family COP00_15505 PF13192 Thioredoxin domain COP00_15505 PF07992 Pyridine nucleotide-disulphide oxidoreductase COP00_15510 PF00324 Amino acid permease COP00_15525 PF06874 Firmicute fructose-1,6-bisphosphatase COP00_15535 PF00672 HAMP domain COP00_15535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase COP00_15535 PF00512 His Kinase A (phospho-acceptor) domain COP00_15540 PF00486 Transcriptional regulatory protein, C terminal COP00_15540 PF00072 Response regulator receiver domain COP00_15545 PF01965 DJ-1/PfpI family COP00_15570 PF01497 Periplasmic binding protein COP00_15575 PF01032 FecCD transport family COP00_15580 PF01032 FecCD transport family COP00_15585 PF02810 SEC-C motif COP00_15585 PF07517 SecA DEAD-like domain COP00_15585 PF07516 SecA Wing and Scaffold domain COP00_15585 PF01043 SecA preprotein cross-linking domain COP00_15610 PF00005 ABC transporter COP00_15620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase COP00_15620 PF07730 Histidine kinase COP00_15625 PF00196 Bacterial regulatory proteins, luxR family COP00_15625 PF00072 Response regulator receiver domain COP00_15650 PF00027 Cyclic nucleotide-binding domain COP00_15650 PF00005 ABC transporter COP00_15670 PF02590 Predicted SPOUT methyltransferase COP00_15675 PF14116 YyzF-like protein COP00_15685 PF00583 Acetyltransferase (GNAT) family COP00_15700 PF13180 PDZ domain COP00_15705 PF00753 Metallo-beta-lactamase superfamily COP00_15710 PF09648 YycH protein COP00_15715 PF07435 YycH protein COP00_15720 PF13426 PAS domain COP00_15720 PF00672 HAMP domain COP00_15720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase COP00_15720 PF00512 His Kinase A (phospho-acceptor) domain COP00_15725 PF00072 Response regulator receiver domain COP00_15725 PF00486 Transcriptional regulatory protein, C terminal COP00_15750 PF00709 Adenylosuccinate synthetase COP00_15760 PF03796 DnaB-like helicase C terminal domain COP00_15760 PF00772 DnaB-like helicase N terminal domain COP00_15770 PF14174 YycC-like protein COP00_15775 PF07690 Major Facilitator Superfamily COP00_15780 PF01979 Amidohydrolase family COP00_15785 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase COP00_15795 PF01380 SIS domain COP00_15800 PF02378 Phosphotransferase system, EIIC COP00_15800 PF00367 phosphotransferase system, EIIB COP00_15805 PF03948 Ribosomal protein L9, C-terminal domain COP00_15805 PF01281 Ribosomal protein L9, N-terminal domain COP00_15810 PF02272 DHHA1 domain COP00_15810 PF01368 DHH family COP00_15815 PF09991 Predicted membrane protein (DUF2232) COP00_15825 PF07875 Coat F domain COP00_15830 PF01740 STAS domain COP00_15830 PF00916 Sulfate permease family COP00_15835 PF07690 Major Facilitator Superfamily COP00_15840 PF01084 Ribosomal protein S18 COP00_15845 PF00436 Single-strand binding protein family COP00_15850 PF01250 Ribosomal protein S6 COP00_15855 PF06071 Protein of unknown function (DUF933) COP00_15855 PF01926 50S ribosome-binding GTPase COP00_15860 PF06107 Bacterial protein of unknown function (DUF951) COP00_15870 PF06866 Protein of unknown function (DUF1256) COP00_15875 PF17762 HTH domain found in ParB protein COP00_15875 PF02195 ParB-like nuclease domain COP00_15880 PF13614 AAA domain COP00_15885 PF02627 Carboxymuconolactone decarboxylase family COP00_15890 PF08281 Sigma-70, region 4 COP00_15890 PF04542 Sigma-70 region 2 COP00_15890 PF12680 SnoaL-like domain COP00_15895 PF02195 ParB-like nuclease domain COP00_15895 PF17762 HTH domain found in ParB protein COP00_15900 PF02527 rRNA small subunit methyltransferase G COP00_15905 PF13932 GidA associated domain COP00_15905 PF01134 Glucose inhibited division protein A COP00_15910 PF12631 MnmE helical domain COP00_15910 PF10396 GTP-binding protein TrmE N-terminus COP00_15910 PF01926 50S ribosome-binding GTPase COP00_15915 PF01424 R3H domain COP00_15915 PF14804 Jag N-terminus COP00_15920 PF02096 60Kd inner membrane protein COP00_15925 PF00825 Ribonuclease P COP00_15930 PF00468 Ribosomal protein L34 COP00_15935 PF00308 Bacterial dnaA protein COP00_15935 PF11638 DnaA N-terminal domain COP00_15935 PF08299 Bacterial dnaA protein helix-turn-helix COP00_15940 PF02768 DNA polymerase III beta subunit, C-terminal domain COP00_15940 PF02767 DNA polymerase III beta subunit, central domain COP00_15940 PF00712 DNA polymerase III beta subunit, N-terminal domain COP00_15950 PF02463 RecF/RecN/SMC N terminal domain COP00_15955 PF04025 Domain of unknown function (DUF370) COP00_15960 PF00204 DNA gyrase B COP00_15960 PF01751 Toprim domain COP00_15960 PF00986 DNA gyrase B subunit, carboxyl terminus COP00_15960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase COP00_15965 PF03989 DNA gyrase C-terminal domain, beta-propeller COP00_15965 PF00521 DNA gyrase/topoisomerase IV, subunit A COP00_15995 PF14175 YaaC-like Protein COP00_16000 PF00478 IMP dehydrogenase / GMP reductase domain COP00_16000 PF00571 CBS domain COP00_16005 PF00768 D-alanyl-D-alanine carboxypeptidase COP00_16005 PF07943 Penicillin-binding protein 5, C-terminal domain COP00_16010 PF01680 SOR/SNZ family COP00_16015 PF01174 SNO glutamine amidotransferase family COP00_16020 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) COP00_16020 PF02403 Seryl-tRNA synthetase N-terminal domain COP00_16025 PF02595 Glycerate kinase family COP00_16035 PF17853 GGDEF-like domain COP00_16035 PF05651 Putative sugar diacid recognition COP00_16035 PF13556 PucR C-terminal helix-turn-helix domain COP00_16055 PF00440 Bacterial regulatory proteins, tetR family COP00_16060 PF01712 Deoxynucleoside kinase COP00_16065 PF01712 Deoxynucleoside kinase COP00_16070 PF00704 Glycosyl hydrolases family 18 COP00_16070 PF01476 LysM domain COP00_16075 PF00857 Isochorismatase family COP00_16080 PF14437 MafB19-like deaminase COP00_16090 PF12169 DNA polymerase III subunits gamma and tau domain III COP00_16095 PF02575 YbaB/EbfC DNA-binding family COP00_16100 PF13662 Toprim domain COP00_16100 PF02132 RecR protein COP00_16105 PF10704 Protein of unknown function (DUF2508) COP00_16110 PF07441 SigmaK-factor processing regulatory protein BofA COP00_16140 PF10764 Inhibitor of sigma-G Gin COP00_16145 PF10112 5-bromo-4-chloroindolyl phosphate hydrolysis protein COP00_16150 PF05816 Toxic anion resistance protein (TelA) COP00_16155 PF01276 Orn/Lys/Arg decarboxylase, major domain COP00_16155 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain COP00_16160 PF02223 Thymidylate kinase COP00_16165 PF06153 Cyclic-di-AMP receptor COP00_16170 PF03885 Protein of unknown function (DUF327) COP00_16175 PF09115 DNA polymerase III, delta subunit, C terminal COP00_16180 PF04468 PSP1 C-terminal conserved region COP00_16185 PF06156 Initiation control protein YabA COP00_16190 PF05175 Methyltransferase small domain COP00_16195 PF01541 GIY-YIG catalytic domain COP00_16200 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases COP00_16205 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin COP00_16205 PF18277 AbrB C-terminal domain COP00_16210 PF08264 Anticodon-binding domain of tRNA COP00_16210 PF09334 tRNA synthetases class I (M) COP00_16210 PF01588 Putative tRNA binding domain COP00_16215 PF01026 TatD related DNase COP00_16220 PF06725 3D domain COP00_16220 PF07501 G5 domain COP00_16220 PF03990 G5-linked-Ubiquitin-like domain COP00_16225 PF13331 Domain of unknown function (DUF4093) COP00_16225 PF13662 Toprim domain COP00_16230 PF00398 Ribosomal RNA adenine dimethylase COP00_16235 PF05582 YabG peptidase U57 COP00_16240 PF06257 Biofilm formation stimulator VEG COP00_16245 PF00269 Small, acid-soluble spore proteins, alpha/beta type COP00_16250 PF08544 GHMP kinases C terminal COP00_16250 PF00288 GHMP kinases N terminal domain COP00_16255 PF09182 Bacterial purine repressor, N-terminal COP00_16255 PF00156 Phosphoribosyl transferase domain COP00_16260 PF01042 Endoribonuclease L-PSP COP00_16265 PF04026 SpoVG COP00_16270 PF00132 Bacterial transferase hexapeptide (six repeats) COP00_16270 PF00483 Nucleotidyl transferase COP00_16275 PF14572 Phosphoribosyl synthetase-associated domain COP00_16275 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase COP00_16280 PF01386 Ribosomal L25p family COP00_16280 PF14693 Ribosomal protein TL5, C-terminal domain COP00_16285 PF01195 Peptidyl-tRNA hydrolase COP00_16290 PF10955 Protein of unknown function (DUF2757) COP00_16295 PF03461 TRCF domain COP00_16295 PF00270 DEAD/DEAH box helicase COP00_16295 PF02559 CarD-like/TRCF domain COP00_16295 PF17757 UvrB interaction domain COP00_16295 PF00271 Helicase conserved C-terminal domain COP00_16300 PF15714 Stage V sporulation protein T C-terminal, transcription factor COP00_16300 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin COP00_16310 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases COP00_16310 PF03819 MazG nucleotide pyrophosphohydrolase domain COP00_16315 PF01479 S4 domain COP00_16320 PF07873 YabP family COP00_16325 PF09578 Spore cortex protein YabQ (Spore_YabQ) COP00_16330 PF04977 Septum formation initiator COP00_16335 PF00575 S1 RNA binding domain COP00_16350 PF07228 Stage II sporulation protein E (SpoIIE) COP00_16355 PF00092 von Willebrand factor type A domain COP00_16360 PF00069 Protein kinase domain COP00_16365 PF11734 TilS substrate C-terminal domain COP00_16365 PF09179 TilS substrate binding domain COP00_16365 PF01171 PP-loop family COP00_16375 PF01434 Peptidase family M41 COP00_16375 PF06480 FtsH Extracellular COP00_16375 PF00004 ATPase family associated with various cellular activities (AAA) COP00_16375 PF17862 AAA+ lid domain COP00_16385 PF01430 Hsp33 protein COP00_16390 PF13145 PPIC-type PPIASE domain COP00_16395 PF00291 Pyridoxal-phosphate dependent enzyme COP00_16400 PF00425 chorismate binding enzyme COP00_16400 PF04715 Anthranilate synthase component I, N terminal region COP00_16405 PF00117 Glutamine amidotransferase class-I COP00_16410 PF01063 Amino-transferase class IV COP00_16415 PF00809 Pterin binding enzyme COP00_16420 PF02152 Dihydroneopterin aldolase COP00_16425 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) COP00_16430 PF01381 Helix-turn-helix COP00_16435 PF01207 Dihydrouridine synthase (Dus) COP00_16440 PF00152 tRNA synthetases class II (D, K and N) COP00_16440 PF01336 OB-fold nucleic acid binding domain COP00_16520 PF05848 CtsR N-terminal HTH domain COP00_16520 PF17727 CtsR C-terminal dimerization domain COP00_16525 PF02151 UvrB/uvrC motif COP00_16530 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain COP00_16535 PF17871 AAA lid domain COP00_16535 PF02861 Clp amino terminal domain, pathogenicity island component COP00_16535 PF10431 C-terminal, D2-small domain, of ClpB protein COP00_16535 PF07724 AAA domain (Cdc48 subfamily) COP00_16535 PF00004 ATPase family associated with various cellular activities (AAA) COP00_16540 PF18073 Rubredoxin metal binding domain COP00_16545 PF02457 DisA bacterial checkpoint controller nucleotide-binding COP00_16545 PF10635 DisA bacterial checkpoint controller linker region COP00_16555 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase COP00_16560 PF02542 YgbB family COP00_16565 PF00749 tRNA synthetases class I (E and Q), catalytic domain COP00_16570 PF00132 Bacterial transferase hexapeptide (six repeats) COP00_16575 PF09190 DALR domain COP00_16575 PF01406 tRNA synthetases class I (C) catalytic domain COP00_16585 PF08032 RNA 2'-O ribose methyltransferase substrate binding COP00_16585 PF00588 SpoU rRNA Methylase family COP00_16590 PF05991 YacP-like NYN domain COP00_16595 PF08281 Sigma-70, region 4 COP00_16595 PF04542 Sigma-70 region 2 COP00_16600 PF00471 Ribosomal protein L33 COP00_16605 PF00584 SecE/Sec61-gamma subunits of protein translocation complex COP00_16610 PF00467 KOW motif COP00_16610 PF02357 Transcription termination factor nusG COP00_16615 PF00298 Ribosomal protein L11, RNA binding domain COP00_16615 PF03946 Ribosomal protein L11, N-terminal domain COP00_16620 PF00687 Ribosomal protein L1p/L10e family COP00_16625 PF00466 Ribosomal protein L10 COP00_16630 PF16320 Ribosomal protein L7/L12 dimerisation domain COP00_16630 PF00542 Ribosomal protein L7/L12 C-terminal domain COP00_16635 PF05175 Methyltransferase small domain COP00_16640 PF04563 RNA polymerase beta subunit COP00_16640 PF04561 RNA polymerase Rpb2, domain 2 COP00_16640 PF04565 RNA polymerase Rpb2, domain 3 COP00_16640 PF10385 RNA polymerase beta subunit external 1 domain COP00_16640 PF00562 RNA polymerase Rpb2, domain 6 COP00_16640 PF04560 RNA polymerase Rpb2, domain 7 COP00_16645 PF04998 RNA polymerase Rpb1, domain 5 COP00_16645 PF05000 RNA polymerase Rpb1, domain 4 COP00_16645 PF04983 RNA polymerase Rpb1, domain 3 COP00_16645 PF04997 RNA polymerase Rpb1, domain 1 COP00_16645 PF00623 RNA polymerase Rpb1, domain 2 COP00_16650 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family COP00_16655 PF00164 Ribosomal protein S12/S23 COP00_16660 PF00177 Ribosomal protein S7p/S5e COP00_16665 PF00679 Elongation factor G C-terminus COP00_16665 PF03764 Elongation factor G, domain IV COP00_16665 PF03144 Elongation factor Tu domain 2 COP00_16665 PF14492 Elongation Factor G, domain II COP00_16665 PF00009 Elongation factor Tu GTP binding domain COP00_16670 PF03143 Elongation factor Tu C-terminal domain COP00_16670 PF00009 Elongation factor Tu GTP binding domain COP00_16670 PF03144 Elongation factor Tu domain 2 COP00_16675 PF00338 Ribosomal protein S10p/S20e COP00_16680 PF00297 Ribosomal protein L3 COP00_16685 PF00573 Ribosomal protein L4/L1 family COP00_16690 PF00276 Ribosomal protein L23 COP00_16695 PF00181 Ribosomal Proteins L2, RNA binding domain COP00_16695 PF03947 Ribosomal Proteins L2, C-terminal domain COP00_16700 PF00203 Ribosomal protein S19 COP00_16705 PF00237 Ribosomal protein L22p/L17e COP00_16710 PF07650 KH domain COP00_16710 PF00189 Ribosomal protein S3, C-terminal domain COP00_16715 PF00252 Ribosomal protein L16p/L10e COP00_16720 PF00831 Ribosomal L29 protein COP00_16725 PF00366 Ribosomal protein S17 COP00_16730 PF00238 Ribosomal protein L14p/L23e COP00_16735 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 COP00_16735 PF00467 KOW motif COP00_16740 PF00673 ribosomal L5P family C-terminus COP00_16740 PF00281 Ribosomal protein L5 COP00_16745 PF00253 Ribosomal protein S14p/S29e COP00_16750 PF00410 Ribosomal protein S8 COP00_16755 PF00347 Ribosomal protein L6 COP00_16760 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast COP00_16765 PF00333 Ribosomal protein S5, N-terminal domain COP00_16765 PF03719 Ribosomal protein S5, C-terminal domain COP00_16770 PF00327 Ribosomal protein L30p/L7e COP00_16775 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A COP00_16780 PF00344 SecY translocase COP00_16785 PF05191 Adenylate kinase, active site lid COP00_16790 PF00557 Metallopeptidase family M24 COP00_16800 PF01176 Translation initiation factor 1A / IF-1 COP00_16805 PF00444 Ribosomal protein L36 COP00_16810 PF00416 Ribosomal protein S13/S18 COP00_16815 PF00411 Ribosomal protein S11 COP00_16820 PF01000 RNA polymerase Rpb3/RpoA insert domain COP00_16820 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain COP00_16820 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain COP00_16825 PF01196 Ribosomal protein L17 COP00_16830 PF00005 ABC transporter COP00_16835 PF00005 ABC transporter COP00_16845 PF01416 tRNA pseudouridine synthase COP00_16850 PF00572 Ribosomal protein L13 COP00_16855 PF00380 Ribosomal protein S9/S16 COP00_16870 PF10730 Protein of unknown function (DUF2521) COP00_16875 PF01520 N-acetylmuramoyl-L-alanine amidase COP00_16880 PF10609 NUBPL iron-transfer P-loop NTPase COP00_16885 PF17898 Spore germination GerD central core domain COP00_16890 PF14089 KinB-signalling pathway activation in sporulation COP00_16895 PF01522 Polysaccharide deacetylase COP00_16925 PF00144 Beta-lactamase COP00_16935 PF01758 Sodium Bile acid symporter family COP00_16940 PF07075 Protein of unknown function (DUF1343) COP00_16945 PF01915 Glycosyl hydrolase family 3 C-terminal domain COP00_16945 PF00933 Glycosyl hydrolase family 3 N terminal domain COP00_16950 PF00144 Beta-lactamase COP00_16955 PF02378 Phosphotransferase system, EIIC COP00_16955 PF00367 phosphotransferase system, EIIB COP00_16965 PF01380 SIS domain COP00_16970 PF04463 Protein of unknown function (DUF523) COP00_17000 PF00491 Arginase family COP00_17005 PF08281 Sigma-70, region 4 COP00_17005 PF04542 Sigma-70 region 2 COP00_17010 PF13490 Putative zinc-finger COP00_17015 PF02457 DisA bacterial checkpoint controller nucleotide-binding COP00_17020 PF07949 YbbR-like protein COP00_17025 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II COP00_17025 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I COP00_17025 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain COP00_17025 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III COP00_17035 PF01380 SIS domain COP00_17040 PF08818 Domain of unknown function (DU1801) COP00_17050 PF07690 Major Facilitator Superfamily COP00_17055 PF01380 SIS domain COP00_17070 PF00005 ABC transporter COP00_17075 PF00392 Bacterial regulatory proteins, gntR family COP00_17080 PF13302 Acetyltransferase (GNAT) domain COP00_17100 PF00376 MerR family regulatory protein COP00_17100 PF09278 MerR, DNA binding COP00_17105 PF00561 alpha/beta hydrolase fold COP00_17110 PF00486 Transcriptional regulatory protein, C terminal COP00_17110 PF00072 Response regulator receiver domain COP00_17115 PF00672 HAMP domain COP00_17115 PF00512 His Kinase A (phospho-acceptor) domain COP00_17120 PF00664 ABC transporter transmembrane region COP00_17120 PF00005 ABC transporter COP00_17135 PF00005 ABC transporter COP00_17145 PF01323 DSBA-like thioredoxin domain COP00_17150 PF13575 Domain of unknown function (DUF4135) COP00_17150 PF05147 Lanthionine synthetase C-like protein COP00_17155 PF03412 Peptidase C39 family COP00_17155 PF00005 ABC transporter COP00_17155 PF00664 ABC transporter transmembrane region COP00_17160 PF05139 Erythromycin esterase COP00_17170 PF04439 Streptomycin adenylyltransferase COP00_17180 PF13419 Haloacid dehalogenase-like hydrolase COP00_17185 PF00324 Amino acid permease COP00_17205 PF17334 Minor curli fiber component A COP00_17210 PF17340 Family of unknown function (DUF5370) COP00_17225 PF03190 Protein of unknown function, DUF255 COP00_17230 PF03190 Protein of unknown function, DUF255 COP00_17235 PF06114 IrrE N-terminal-like domain COP00_17240 PF01381 Helix-turn-helix COP00_17260 PF06125 Bacterial protein of unknown function (DUF961) COP00_17270 PF18106 Rolling Circle replication initiation protein N-terminal domain COP00_17270 PF02486 Replication initiation factor COP00_17285 PF12642 Conjugative transposon protein TcpC COP00_17295 PF12648 TcpE family COP00_17310 PF08960 Domain of unknown function (DUF1874) COP00_17320 PF00877 NlpC/P60 family COP00_17330 PF14729 Domain of unknown function with cystatin-like fold (DUF4467) COP00_17345 PF18801 response regulator aspartate phosphatase H, N terminal COP00_17355 PF03190 Protein of unknown function, DUF255 COP00_17360 PF00145 C-5 cytosine-specific DNA methylase COP00_17360 PF01381 Helix-turn-helix COP00_17370 PF03190 Protein of unknown function, DUF255 COP00_17375 PF06445 GyrI-like small molecule binding domain COP00_17390 PF00144 Beta-lactamase COP00_17395 PF03190 Protein of unknown function, DUF255 COP00_17400 PF06445 GyrI-like small molecule binding domain COP00_17410 PF01638 HxlR-like helix-turn-helix COP00_17415 PF12697 Alpha/beta hydrolase family COP00_17420 PF07690 Major Facilitator Superfamily COP00_17425 PF01520 N-acetylmuramoyl-L-alanine amidase COP00_17425 PF08239 Bacterial SH3 domain COP00_17440 PF04203 Sortase domain COP00_17450 PF18277 AbrB C-terminal domain COP00_17450 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin COP00_17465 PF07690 Major Facilitator Superfamily COP00_17470 PF01177 Asp/Glu/Hydantoin racemase COP00_17490 PF01209 ubiE/COQ5 methyltransferase family COP00_17495 PF00282 Pyridoxal-dependent decarboxylase conserved domain COP00_17500 PF01047 MarR family COP00_17515 PF00881 Nitroreductase family COP00_17520 PF07729 FCD domain COP00_17520 PF00392 Bacterial regulatory proteins, gntR family COP00_17525 PF01925 Sulfite exporter TauE/SafE COP00_17540 PF05360 yiaA/B two helix domain COP00_17560 PF08924 Domain of unknown function (DUF1906) COP00_17560 PF01471 Putative peptidoglycan binding domain COP00_17570 PF00892 EamA-like transporter family COP00_17575 PF02311 AraC-like ligand binding domain COP00_17575 PF12833 Helix-turn-helix domain COP00_17590 PF00465 Iron-containing alcohol dehydrogenase COP00_17595 PF13145 PPIC-type PPIASE domain COP00_17605 PF10710 Protein of unknown function (DUF2512) COP00_17615 PF04794 YdjC-like protein COP00_17620 PF02378 Phosphotransferase system, EIIC COP00_17620 PF00367 phosphotransferase system, EIIB COP00_17630 PF07739 TipAS antibiotic-recognition domain COP00_17630 PF13411 MerR HTH family regulatory protein COP00_17635 PF13520 Amino acid permease COP00_17645 PF10990 Protein of unknown function (DUF2809) COP00_17650 PF10138 vWA found in TerF C terminus COP00_17655 PF01235 Sodium:alanine symporter family COP00_17660 PF04960 Glutaminase COP00_17665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase COP00_17670 PF00072 Response regulator receiver domain COP00_17670 PF08664 YcbB domain COP00_17675 PF13302 Acetyltransferase (GNAT) domain COP00_17680 PF16655 PhoD-like phosphatase, N-terminal domain COP00_17680 PF09423 PhoD-like phosphatase COP00_17685 PF02416 mttA/Hcf106 family COP00_17690 PF00902 Sec-independent protein translocase protein (TatC) COP00_17695 PF00701 Dihydrodipicolinate synthetase family COP00_17700 PF00171 Aldehyde dehydrogenase family COP00_17705 PF07690 Major Facilitator Superfamily COP00_17710 PF13378 Enolase C-terminal domain-like COP00_17715 PF00392 Bacterial regulatory proteins, gntR family COP00_17715 PF07729 FCD domain COP00_17720 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus COP00_17720 PF08666 SAF domain COP00_17740 PF13039 Protein of unknown function (DUF3900) COP00_17740 PF13037 Domain of unknown function (DUF3898) COP00_17745 PF16226 Domain of unknown function (DUF4885) COP00_17750 PF01636 Phosphotransferase enzyme family COP00_17755 PF01047 MarR family COP00_17760 PF00501 AMP-binding enzyme COP00_17760 PF13193 AMP-binding enzyme C-terminal domain COP00_17780 PF13411 MerR HTH family regulatory protein COP00_17780 PF07739 TipAS antibiotic-recognition domain COP00_17790 PF15777 Tryptophan RNA-binding attenuator protein inhibitory protein COP00_17795 PF00892 EamA-like transporter family COP00_17800 PF06271 RDD family COP00_17805 PF05225 helix-turn-helix, Psq domain COP00_17805 PF02810 SEC-C motif COP00_17810 PF00005 ABC transporter COP00_17825 PF00486 Transcriptional regulatory protein, C terminal COP00_17825 PF00072 Response regulator receiver domain COP00_17830 PF00512 His Kinase A (phospho-acceptor) domain COP00_17830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase COP00_17835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family COP00_17835 PF03466 LysR substrate binding domain COP00_17840 PF14552 Tautomerase enzyme COP00_17850 PF13649 Methyltransferase domain COP00_17855 PF17118 Domain of unknown function (DUF5105) COP00_17855 PF11611 Domain of unknown function (DUF4352) COP00_17870 PF17763 Glutaminase/Asparaginase C-terminal domain COP00_17870 PF00710 Asparaginase, N-terminal COP00_17875 PF00583 Acetyltransferase (GNAT) family COP00_17880 PF01425 Amidase COP00_17885 PF08439 Oligopeptidase F COP00_17885 PF01432 Peptidase family M3 COP00_17890 PF04226 Transglycosylase associated protein COP00_17900 PF02754 Cysteine-rich domain COP00_17900 PF13183 4Fe-4S dicluster domain COP00_17905 PF02913 FAD linked oxidases, C-terminal domain COP00_17905 PF01565 FAD binding domain COP00_17910 PF00089 Trypsin COP00_17925 PF16244 Domain of unknown function (DUF4901) COP00_17935 PF00581 Rhodanese-like domain COP00_17940 PF07486 Cell Wall Hydrolase COP00_17945 PF00296 Luciferase-like monooxygenase COP00_17950 PF00877 NlpC/P60 family COP00_17960 PF13732 Domain of unknown function (DUF4162) COP00_17960 PF00005 ABC transporter COP00_17965 PF17932 Tetracyclin repressor-like, C-terminal domain COP00_17965 PF00440 Bacterial regulatory proteins, tetR family COP00_17990 PF02342 TerD domain COP00_17995 PF02342 TerD domain COP00_18000 PF02342 TerD domain COP00_18005 PF03741 Integral membrane protein TerC family COP00_18020 PF11202 Phosphoribosyl transferase (PRTase) COP00_18020 PF15608 PELOTA RNA binding domain COP00_18035 PF14266 Putative component of 'biosynthetic module' COP00_18040 PF05816 Toxic anion resistance protein (TelA) COP00_18045 PF00571 CBS domain COP00_18045 PF00005 ABC transporter COP00_18050 PF00528 Binding-protein-dependent transport system inner membrane component COP00_18055 PF04069 Substrate binding domain of ABC-type glycine betaine transport system COP00_18060 PF01546 Peptidase family M20/M25/M40 COP00_18060 PF07687 Peptidase dimerisation domain COP00_18065 PF03606 C4-dicarboxylate anaerobic carrier COP00_18070 PF07690 Major Facilitator Superfamily COP00_18075 PF07690 Major Facilitator Superfamily COP00_18080 PF00056 lactate/malate dehydrogenase, NAD binding domain COP00_18080 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain COP00_18085 PF02652 L-lactate permease COP00_18090 PF01810 LysE type translocator COP00_18095 PF00324 Amino acid permease COP00_18100 PF02540 NAD synthase COP00_18105 PF01202 Shikimate kinase COP00_18110 PF10127 RNA repair pathway DNA polymerase beta family COP00_18115 PF01619 Proline dehydrogenase COP00_18120 PF00171 Aldehyde dehydrogenase family COP00_18125 PF00474 Sodium:solute symporter family COP00_18130 PF17853 GGDEF-like domain COP00_18130 PF13556 PucR C-terminal helix-turn-helix domain COP00_18135 PF09323 Domain of unknown function (DUF1980) COP00_18140 PF03773 Predicted permease COP00_18150 PF05448 Acetyl xylan esterase (AXE1) COP00_18175 PF00528 Binding-protein-dependent transport system inner membrane component COP00_18180 PF00497 Bacterial extracellular solute-binding proteins, family 3 COP00_18195 PF01497 Periplasmic binding protein COP00_18200 PF01032 FecCD transport family COP00_18205 PF01032 FecCD transport family COP00_18210 PF00005 ABC transporter COP00_18215 PF00005 ABC transporter COP00_18220 PF00232 Glycosyl hydrolase family 1 COP00_18230 PF01494 FAD binding domain COP00_18240 PF14449 Pre-toxin TG COP00_18240 PF04740 LXG domain of WXG superfamily COP00_18240 PF14410 HNH/ENDO VII superfamily nuclease with conserved GHE residues COP00_18245 PF05378 Hydantoinase/oxoprolinase N-terminal region COP00_18245 PF01968 Hydantoinase/oxoprolinase COP00_18250 PF02538 Hydantoinase B/oxoprolinase COP00_18260 PF08402 TOBE domain COP00_18260 PF00005 ABC transporter COP00_18265 PF00528 Binding-protein-dependent transport system inner membrane component COP00_18270 PF00528 Binding-protein-dependent transport system inner membrane component COP00_18280 PF13193 AMP-binding enzyme C-terminal domain COP00_18280 PF00501 AMP-binding enzyme COP00_18280 PF00550 Phosphopantetheine attachment site COP00_18280 PF00668 Condensation domain COP00_18285 PF00501 AMP-binding enzyme COP00_18285 PF13193 AMP-binding enzyme C-terminal domain COP00_18285 PF00668 Condensation domain COP00_18285 PF00975 Thioesterase domain COP00_18285 PF00550 Phosphopantetheine attachment site COP00_18290 PF00975 Thioesterase domain COP00_18300 PF00155 Aminotransferase class I and II COP00_18300 PF00392 Bacterial regulatory proteins, gntR family COP00_18310 PF00756 Putative esterase COP00_18315 PF06445 GyrI-like small molecule binding domain COP00_18315 PF12833 Helix-turn-helix domain COP00_18325 PF02894 Oxidoreductase family, C-terminal alpha/beta domain COP00_18325 PF01408 Oxidoreductase family, NAD-binding Rossmann fold COP00_18330 PF03466 LysR substrate binding domain COP00_18330 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family COP00_18340 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain COP00_18340 PF02743 Cache domain COP00_18340 PF00672 HAMP domain COP00_18345 PF00005 ABC transporter COP00_18350 PF00528 Binding-protein-dependent transport system inner membrane component COP00_18355 PF00497 Bacterial extracellular solute-binding proteins, family 3 COP00_18360 PF02954 Bacterial regulatory protein, Fis family COP00_18360 PF13426 PAS domain COP00_18360 PF00158 Sigma-54 interaction domain COP00_18365 PF00202 Aminotransferase class-III COP00_18375 PF00491 Arginase family COP00_18385 PF01047 MarR family COP00_18390 PF00583 Acetyltransferase (GNAT) family COP00_18395 PF04299 Putative FMN-binding domain COP00_18400 PF03466 LysR substrate binding domain COP00_18400 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family COP00_18405 PF02441 Flavoprotein COP00_18410 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase COP00_18470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase COP00_18470 PF00672 HAMP domain COP00_18470 PF02743 Cache domain COP00_18470 PF06580 Histidine kinase COP00_18475 PF00196 Bacterial regulatory proteins, luxR family COP00_18475 PF00072 Response regulator receiver domain COP00_18480 PF13407 Periplasmic binding protein domain COP00_18485 PF00005 ABC transporter COP00_18490 PF02653 Branched-chain amino acid transport system / permease component COP00_18495 PF07690 Major Facilitator Superfamily COP00_18500 PF01047 MarR family COP00_18500 PF00583 Acetyltransferase (GNAT) family COP00_18505 PF08532 Beta-galactosidase trimerisation domain COP00_18505 PF08533 Beta-galactosidase C-terminal domain COP00_18505 PF02449 Beta-galactosidase COP00_18510 PF02333 Phytase COP00_18520 PF00854 POT family COP00_18525 PF13229 Right handed beta helix region COP00_18525 PF12708 Pectate lyase superfamily protein COP00_18535 PF03323 Bacillus/Clostridium GerA spore germination protein COP00_18540 PF05504 Spore germination B3/ GerAC like, C-terminal COP00_18545 PF03845 Spore germination protein COP00_18550 PF13411 MerR HTH family regulatory protein COP00_18550 PF07739 TipAS antibiotic-recognition domain COP00_18555 PF00005 ABC transporter COP00_18560 PF02687 FtsX-like permease family COP00_18560 PF12704 MacB-like periplasmic core domain COP00_18565 PF00486 Transcriptional regulatory protein, C terminal COP00_18565 PF00072 Response regulator receiver domain COP00_18575 PF05227 CHASE3 domain COP00_18575 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain COP00_18575 PF00672 HAMP domain COP00_18580 PF13840 ACT domain COP00_18580 PF00696 Amino acid kinase family COP00_18585 PF01032 FecCD transport family COP00_18590 PF01032 FecCD transport family COP00_18595 PF00005 ABC transporter COP00_18600 PF01497 Periplasmic binding protein COP00_18605 PF07690 Major Facilitator Superfamily COP00_18610 PF00440 Bacterial regulatory proteins, tetR family COP00_18620 PF00881 Nitroreductase family COP00_18625 PF03992 Antibiotic biosynthesis monooxygenase COP00_18630 PF01022 Bacterial regulatory protein, arsR family COP00_18635 PF00155 Aminotransferase class I and II COP00_18635 PF00392 Bacterial regulatory proteins, gntR family COP00_18640 PF00202 Aminotransferase class-III COP00_18645 PF13520 Amino acid permease COP00_18650 PF00171 Aldehyde dehydrogenase family COP00_18655 PF00106 short chain dehydrogenase COP00_18660 PF07987 Domain of unkown function (DUF1775) COP00_18665 PF04234 CopC domain COP00_18665 PF13115 YtkA-like COP00_18665 PF05425 Copper resistance protein D COP00_18670 PF05573 NosL COP00_18670 PF08220 DeoR-like helix-turn-helix domain COP00_18675 PF04324 BFD-like [2Fe-2S] binding domain COP00_18675 PF07992 Pyridine nucleotide-disulphide oxidoreductase COP00_18675 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain COP00_18675 PF18267 Rubredoxin NAD+ reductase C-terminal domain COP00_18680 PF04879 Molybdopterin oxidoreductase Fe4S4 domain COP00_18680 PF01568 Molydopterin dinucleotide binding domain COP00_18680 PF00384 Molybdopterin oxidoreductase COP00_18690 PF00355 Rieske [2Fe-2S] domain COP00_18695 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases COP00_18700 PF13411 MerR HTH family regulatory protein COP00_18715 PF07977 FabA-like domain COP00_18720 PF15493 Domain of unknown function, YrpD COP00_18730 PF03746 LamB/YcsF family COP00_18735 PF01566 Natural resistance-associated macrophage protein COP00_18740 PF07286 Protein of unknown function (DUF1445) COP00_18745 PF02682 Carboxyltransferase domain, subdomain C and D COP00_18750 PF02626 Carboxyltransferase domain, subdomain A and B COP00_18755 PF09339 IclR helix-turn-helix domain COP00_18755 PF01614 Bacterial transcriptional regulator COP00_18760 PF13472 GDSL-like Lipase/Acylhydrolase family COP00_18765 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit COP00_18765 PF02378 Phosphotransferase system, EIIC COP00_18770 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 COP00_18775 PF01232 Mannitol dehydrogenase Rossmann domain COP00_18775 PF08125 Mannitol dehydrogenase C-terminal domain COP00_18780 PF00874 PRD domain COP00_18780 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 COP00_18780 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit COP00_18780 PF05043 Mga helix-turn-helix domain COP00_18780 PF08279 HTH domain COP00_18795 PF16242 Pyridoxamine 5'-phosphate oxidase like COP00_18800 PF10997 Alternate to MurJ COP00_18805 PF03816 Cell envelope-related transcriptional attenuator domain COP00_18810 PF12823 Domain of unknown function (DUF3817) COP00_18820 PF01037 Lrp/AsnC ligand binding domain COP00_18825 PF01751 Toprim domain COP00_18825 PF01131 DNA topoisomerase COP00_18830 PF02153 Prephenate dehydrogenase COP00_18835 PF04715 Anthranilate synthase component I, N terminal region COP00_18835 PF00117 Glutamine amidotransferase class-I COP00_18835 PF00425 chorismate binding enzyme COP00_18840 PF01817 Chorismate mutase type II COP00_18850 PF01266 FAD dependent oxidoreductase COP00_18855 PF13520 Amino acid permease COP00_18860 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain COP00_18860 PF00205 Thiamine pyrophosphate enzyme, central domain COP00_18860 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain COP00_18880 PF13302 Acetyltransferase (GNAT) domain COP00_18885 PF01566 Natural resistance-associated macrophage protein COP00_18890 PF04226 Transglycosylase associated protein COP00_18900 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase COP00_18905 PF09954 Uncharacterized protein conserved in bacteria (DUF2188) COP00_18910 PF12787 EcsC protein family COP00_18925 PF07883 Cupin domain COP00_18935 PF03480 Bacterial extracellular solute-binding protein, family 7 COP00_18940 PF17203 Single cache domain 3 COP00_18940 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain COP00_18940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase COP00_18945 PF00072 Response regulator receiver domain COP00_18945 PF08279 HTH domain COP00_18950 PF00375 Sodium:dicarboxylate symporter family COP00_18955 PF01594 AI-2E family transporter COP00_18965 PF00005 ABC transporter COP00_18985 PF13040 Fur-regulated basic protein B COP00_18995 PF00085 Thioredoxin COP00_19000 PF01820 D-ala D-ala ligase N-terminus COP00_19000 PF07478 D-ala D-ala ligase C-terminus COP00_19005 PF02875 Mur ligase family, glutamate ligase domain COP00_19005 PF01225 Mur ligase family, catalytic domain COP00_19005 PF08245 Mur ligase middle domain COP00_19010 PF12146 Serine aminopeptidase, S33 COP00_19020 PF00271 Helicase conserved C-terminal domain COP00_19020 PF00270 DEAD/DEAH box helicase COP00_19025 PF03703 Bacterial PH domain COP00_19030 PF03703 Bacterial PH domain COP00_19035 PF01694 Rhomboid family COP00_19045 PF01168 Alanine racemase, N-terminal domain COP00_19045 PF00842 Alanine racemase, C-terminal domain COP00_19050 PF01402 Ribbon-helix-helix protein, copG family COP00_19055 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system COP00_19060 PF01740 STAS domain COP00_19060 PF08678 Rsbr N terminal COP00_19065 PF01740 STAS domain COP00_19075 PF07228 Stage II sporulation protein E (SpoIIE) COP00_19075 PF08673 Phosphoserine phosphatase RsbU, N-terminal domain COP00_19080 PF01740 STAS domain COP00_19085 PF13581 Histidine kinase-like ATPase domain COP00_19090 PF04545 Sigma-70, region 4 COP00_19090 PF04542 Sigma-70 region 2 COP00_19090 PF04539 Sigma-70 region 3 COP00_19095 PF07228 Stage II sporulation protein E (SpoIIE) COP00_19100 PF16921 Tex protein YqgF-like domain COP00_19100 PF09371 Tex-like protein N-terminal domain COP00_19100 PF00575 S1 RNA binding domain COP00_19100 PF17674 HHH domain COP00_19110 PF10263 SprT-like family COP00_19170 PF00457 Glycosyl hydrolases family 11 COP00_19200 PF18801 response regulator aspartate phosphatase H, N terminal COP00_19205 PF01022 Bacterial regulatory protein, arsR family COP00_19215 PF08818 Domain of unknown function (DU1801) COP00_19225 PF01638 HxlR-like helix-turn-helix COP00_19230 PF00892 EamA-like transporter family COP00_19235 PF02311 AraC-like ligand binding domain COP00_19235 PF12833 Helix-turn-helix domain COP00_19240 PF00892 EamA-like transporter family COP00_19245 PF07690 Major Facilitator Superfamily COP00_19250 PF16859 Tetracyclin repressor-like, C-terminal domain COP00_19250 PF00440 Bacterial regulatory proteins, tetR family COP00_19255 PF14602 Hexapeptide repeat of succinyl-transferase COP00_19255 PF12464 Maltose acetyltransferase COP00_19260 PF07690 Major Facilitator Superfamily COP00_19270 PF05525 Branched-chain amino acid transport protein COP00_19275 PF01734 Patatin-like phospholipase COP00_19280 PF01638 HxlR-like helix-turn-helix COP00_19285 PF02525 Flavodoxin-like fold COP00_19290 PF00324 Amino acid permease COP00_19295 PF00535 Glycosyl transferase family 2 COP00_19305 PF04199 Putative cyclase COP00_19325 PF00881 Nitroreductase family COP00_19330 PF01047 MarR family COP00_19335 PF00561 alpha/beta hydrolase fold COP00_19345 PF08281 Sigma-70, region 4 COP00_19345 PF04542 Sigma-70 region 2 COP00_19350 PF13739 Deacetylase PdaC COP00_19350 PF11738 Protein of unknown function (DUF3298) COP00_19355 PF01757 Acyltransferase family COP00_19360 PF00293 NUDIX domain COP00_19365 PF07690 Major Facilitator Superfamily COP00_19370 PF00465 Iron-containing alcohol dehydrogenase COP00_19375 PF06580 Histidine kinase COP00_19375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase COP00_19380 PF04397 LytTr DNA-binding domain COP00_19380 PF00072 Response regulator receiver domain COP00_19390 PF04203 Sortase domain COP00_19395 PF03600 Citrate transporter COP00_19400 PF03401 Tripartite tricarboxylate transporter family receptor COP00_19415 PF00083 Sugar (and other) transporter COP00_19460 PF00586 AIR synthase related protein, N-terminal domain COP00_19460 PF02769 AIR synthase related protein, C-terminal domain COP00_19465 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE COP00_19470 PF00814 Glycoprotease family COP00_19475 PF00583 Acetyltransferase (GNAT) family COP00_19480 PF00814 Glycoprotease family COP00_19485 PF16326 ABC transporter C-terminal domain COP00_19485 PF12848 ABC transporter COP00_19485 PF00005 ABC transporter COP00_19490 PF01967 MoaC family COP00_19500 PF02416 mttA/Hcf106 family COP00_19505 PF00902 Sec-independent protein translocase protein (TatC) COP00_19510 PF14146 Domain of unknown function (DUF4305) COP00_19515 PF02517 CPBP intramembrane metalloprotease COP00_19520 PF00166 Chaperonin 10 Kd subunit COP00_19525 PF00118 TCP-1/cpn60 chaperonin family COP00_19530 PF00589 Phage integrase family COP00_19530 PF02899 Phage integrase, N-terminal SAM-like domain COP00_19535 PF00717 Peptidase S24-like COP00_19535 PF01726 LexA DNA binding domain COP00_19550 PF08346 AntA/AntB antirepressor COP00_19550 PF10548 P22AR C-terminal domain COP00_19685 PF03354 Phage Terminase COP00_19700 PF00574 Clp protease COP00_19745 PF01464 Transglycosylase SLT domain COP00_19755 PF13457 GW (Gly-Tryp) dipeptide domain COP00_19755 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase COP00_19760 PF11962 Peptidase_G2, IMC autoproteolytic cleavage domain COP00_19760 PF12708 Pectate lyase superfamily protein COP00_19780 PF05105 Bacteriophage holin family COP00_19785 PF01510 N-acetylmuramoyl-L-alanine amidase COP00_19785 PF01471 Putative peptidoglycan binding domain COP00_19795 PF14449 Pre-toxin TG COP00_19795 PF04740 LXG domain of WXG superfamily COP00_19795 PF14410 HNH/ENDO VII superfamily nuclease with conserved GHE residues COP00_19800 PF18801 response regulator aspartate phosphatase H, N terminal COP00_19805 PF08863 YolD-like protein COP00_19850 PF04740 LXG domain of WXG superfamily COP00_19850 PF14449 Pre-toxin TG COP00_19870 PF08863 YolD-like protein COP00_19890 PF07451 Stage V sporulation protein AD (SpoVAD) COP00_19895 PF03862 SpoVAC/SpoVAEB sporulation membrane protein COP00_19905 PF04239 Protein of unknown function (DUF421) COP00_19910 PF02586 SOS response associated peptidase (SRAP) COP00_19915 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily COP00_19920 PF13520 Amino acid permease COP00_19940 PF10787 Uncharacterised protein from bacillus cereus group COP00_19955 PF04343 Protein of unknown function, DUF488 COP00_19960 PF00106 short chain dehydrogenase COP00_19965 PF07690 Major Facilitator Superfamily COP00_19980 PF11495 Archaeal transcriptional regulator TrmB COP00_19980 PF01978 Sugar-specific transcriptional regulator TrmB COP00_19985 PF01810 LysE type translocator COP00_19990 PF00109 Beta-ketoacyl synthase, N-terminal domain COP00_19990 PF02801 Beta-ketoacyl synthase, C-terminal domain COP00_20020 PF01522 Polysaccharide deacetylase COP00_20020 PF11738 Protein of unknown function (DUF3298) COP00_20020 PF13739 Deacetylase PdaC COP00_20025 PF00128 Alpha amylase, catalytic domain COP00_20025 PF09154 Domain of unknown function (DUF1939) COP00_20030 PF00356 Bacterial regulatory proteins, lacI family COP00_20035 PF02903 Alpha amylase, N-terminal ig-like domain COP00_20035 PF00128 Alpha amylase, catalytic domain COP00_20040 PF13416 Bacterial extracellular solute-binding protein COP00_20045 PF00528 Binding-protein-dependent transport system inner membrane component COP00_20050 PF00528 Binding-protein-dependent transport system inner membrane component COP00_20055 PF06691 Protein of unknown function (DUF1189) COP00_20060 PF03633 Glycosyl hydrolase family 65, C-terminal domain COP00_20060 PF03636 Glycosyl hydrolase family 65, N-terminal domain COP00_20060 PF03632 Glycosyl hydrolase family 65 central catalytic domain COP00_20065 PF16657 Maltogenic Amylase, C-terminal domain COP00_20065 PF00128 Alpha amylase, catalytic domain COP00_20070 PF13419 Haloacid dehalogenase-like hydrolase COP00_20095 PF03330 Lytic transglycolase COP00_20100 PF07676 WD40-like Beta Propeller Repeat COP00_20115 PF10502 Signal peptidase, peptidase S26 COP00_20120 PF13460 NAD(P)H-binding COP00_20125 PF12833 Helix-turn-helix domain COP00_20130 PF00394 Multicopper oxidase COP00_20130 PF07731 Multicopper oxidase COP00_20130 PF07732 Multicopper oxidase COP00_20140 PF16916 Dimerisation domain of Zinc Transporter COP00_20140 PF01545 Cation efflux family COP00_20145 PF07726 ATPase family associated with various cellular activities (AAA) COP00_20145 PF17863 AAA lid domain COP00_20150 PF01882 Protein of unknown function DUF58 COP00_20155 PF01841 Transglutaminase-like superfamily COP00_20155 PF11992 Domain of unknown function (DUF3488) COP00_20155 PF13559 Domain of unknown function (DUF4129) COP00_20160 PF00117 Glutamine amidotransferase class-I COP00_20160 PF00958 GMP synthase C terminal domain COP00_20160 PF02540 NAD synthase COP00_20165 PF00860 Permease family COP00_20175 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) COP00_20180 PF14044 NETI protein COP00_20185 PF00731 AIR carboxylase COP00_20190 PF02222 ATP-grasp domain COP00_20190 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain COP00_20195 PF00206 Lyase COP00_20195 PF10397 Adenylosuccinate lyase C-terminus COP00_20200 PF01259 SAICAR synthetase COP00_20205 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase COP00_20215 PF02769 AIR synthase related protein, C-terminal domain COP00_20215 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain COP00_20215 PF00586 AIR synthase related protein, N-terminal domain COP00_20220 PF00156 Phosphoribosyl transferase domain COP00_20225 PF02769 AIR synthase related protein, C-terminal domain COP00_20225 PF00586 AIR synthase related protein, N-terminal domain COP00_20230 PF00551 Formyl transferase COP00_20235 PF01808 AICARFT/IMPCHase bienzyme COP00_20235 PF02142 MGS-like domain COP00_20240 PF02844 Phosphoribosylglycinamide synthetase, N domain COP00_20240 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain COP00_20240 PF02843 Phosphoribosylglycinamide synthetase, C domain COP00_20255 PF11127 Protein of unknown function (DUF2892) COP00_20260 PF01979 Amidohydrolase family COP00_20260 PF13382 Adenine deaminase C-terminal domain COP00_20265 PF17479 Protein of unknown function (DUF3048) C-terminal domain COP00_20265 PF11258 Protein of unknown function (DUF3048) N-terminal domain COP00_20270 PF01371 Trp repressor protein COP00_20275 PF01884 PcrB family COP00_20280 PF00580 UvrD/REP helicase N-terminal domain COP00_20280 PF13361 UvrD-like helicase C-terminal domain COP00_20285 PF03120 NAD-dependent DNA ligase OB-fold domain COP00_20285 PF03119 NAD-dependent DNA ligase C4 zinc finger domain COP00_20285 PF01653 NAD-dependent DNA ligase adenylation domain COP00_20285 PF00533 BRCA1 C Terminus (BRCT) domain COP00_20285 PF12826 Helix-hairpin-helix motif COP00_20290 PF07537 CamS sex pheromone cAM373 precursor COP00_20295 PF02308 MgtC family COP00_20305 PF00474 Sodium:solute symporter family COP00_20310 PF02686 Glu-tRNAGln amidotransferase C subunit COP00_20315 PF01425 Amidase COP00_20320 PF02934 GatB/GatE catalytic domain COP00_20320 PF02637 GatB domain COP00_20330 PF08240 Alcohol dehydrogenase GroES-like domain COP00_20330 PF00107 Zinc-binding dehydrogenase COP00_20335 PF00440 Bacterial regulatory proteins, tetR family COP00_20340 PF00873 AcrB/AcrD/AcrF family COP00_20345 PF13302 Acetyltransferase (GNAT) domain COP00_20350 PF01156 Inosine-uridine preferring nucleoside hydrolase COP00_20355 PF00781 Diacylglycerol kinase catalytic domain COP00_20360 PF05958 tRNA (Uracil-5-)-methyltransferase COP00_20360 PF01938 TRAM domain COP00_20370 PF01381 Helix-turn-helix COP00_20370 PF00145 C-5 cytosine-specific DNA methylase COP00_20375 PF09019 EcoRII C terminal COP00_20375 PF09217 Restriction endonuclease EcoRII, N-terminal COP00_20380 PF04480 Protein of unknown function (DUF559) COP00_20380 PF03852 DNA mismatch endonuclease Vsr COP00_20385 PF02378 Phosphotransferase system, EIIC COP00_20385 PF00367 phosphotransferase system, EIIB COP00_20385 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 COP00_20390 PF00232 Glycosyl hydrolase family 1 COP00_20395 PF00874 PRD domain COP00_20395 PF03123 CAT RNA binding domain COP00_20405 PF18801 response regulator aspartate phosphatase H, N terminal COP00_20435 PF13087 AAA domain COP00_20435 PF13091 PLD-like domain COP00_20450 PF00155 Aminotransferase class I and II COP00_20450 PF00392 Bacterial regulatory proteins, gntR family COP00_20455 PF00892 EamA-like transporter family COP00_20460 PF01709 Transcriptional regulator COP00_20470 PF00939 Sodium:sulfate symporter transmembrane region COP00_20475 PF03949 Malic enzyme, NAD binding domain COP00_20475 PF00390 Malic enzyme, N-terminal domain COP00_20480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family COP00_20480 PF03466 LysR substrate binding domain COP00_20485 PF00171 Aldehyde dehydrogenase family COP00_20490 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain COP00_20495 PF01040 UbiA prenyltransferase family COP00_20500 PF00440 Bacterial regulatory proteins, tetR family COP00_20505 PF00939 Sodium:sulfate symporter transmembrane region COP00_20510 PF12848 ABC transporter COP00_20510 PF16326 ABC transporter C-terminal domain COP00_20510 PF00005 ABC transporter COP00_20515 PF01022 Bacterial regulatory protein, arsR family COP00_20520 PF07690 Major Facilitator Superfamily COP00_20525 PF02649 Type I GTP cyclohydrolase folE2 COP00_20545 PF03744 6-carboxyhexanoate--CoA ligase COP00_20550 PF00202 Aminotransferase class-III COP00_20555 PF00155 Aminotransferase class I and II COP00_20565 PF04055 Radical SAM superfamily COP00_20565 PF06968 Biotin and Thiamin Synthesis associated domain COP00_20570 PF00067 Cytochrome P450 COP00_20575 PF13411 MerR HTH family regulatory protein COP00_20580 PF07690 Major Facilitator Superfamily COP00_20585 PF00005 ABC transporter COP00_20585 PF12848 ABC transporter COP00_20590 PF00271 Helicase conserved C-terminal domain COP00_20590 PF00270 DEAD/DEAH box helicase COP00_20595 PF11486 Protein of unknown function (DUF3212) COP00_20600 PF11181 Heat induced stress protein YflT COP00_20605 PF00939 Sodium:sulfate symporter transmembrane region COP00_20615 PF00005 ABC transporter COP00_20635 PF00753 Metallo-beta-lactamase superfamily COP00_20645 PF02898 Nitric oxide synthase, oxygenase domain COP00_20650 PF00704 Glycosyl hydrolases family 18 COP00_20660 PF13021 Domain of unknown function (DUF3885) COP00_20665 PF07853 Protein of unknown function (DUF1648) COP00_20665 PF13630 SdpI/YhfL protein family COP00_20670 PF01022 Bacterial regulatory protein, arsR family COP00_20675 PF00708 Acylphosphatase COP00_20680 PF03473 MOSC domain COP00_20680 PF03475 3-alpha domain COP00_20685 PF11121 Protein of unknown function (DUF2639) COP00_20695 PF00557 Metallopeptidase family M24 COP00_20700 PF00884 Sulfatase COP00_20710 PF09350 Domain of unknown function (DUF1992) COP00_20715 PF02378 Phosphotransferase system, EIIC COP00_20715 PF00367 phosphotransferase system, EIIB COP00_20720 PF16657 Maltogenic Amylase, C-terminal domain COP00_20720 PF00128 Alpha amylase, catalytic domain COP00_20725 PF07702 UTRA domain COP00_20725 PF00392 Bacterial regulatory proteins, gntR family COP00_20730 PF00132 Bacterial transferase hexapeptide (six repeats) COP00_20740 PF00535 Glycosyl transferase family 2 COP00_20745 PF13181 Tetratricopeptide repeat COP00_20745 PF00535 Glycosyl transferase family 2 COP00_20750 PF00534 Glycosyl transferases group 1 COP00_20750 PF00862 Sucrose synthase COP00_20765 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family COP00_20775 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain COP00_20775 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain COP00_20775 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain COP00_20780 PF17314 Family of unknown function (DUF5360) COP00_20785 PF00893 Small Multidrug Resistance protein COP00_20790 PF00440 Bacterial regulatory proteins, tetR family COP00_20800 PF01638 HxlR-like helix-turn-helix COP00_20805 PF00881 Nitroreductase family COP00_20820 PF00149 Calcineurin-like phosphoesterase COP00_20820 PF02872 5'-nucleotidase, C-terminal domain COP00_20830 PF06569 Protein of unknown function (DUF1128) COP00_20835 PF01451 Low molecular weight phosphotyrosine protein phosphatase COP00_20845 PF03631 Virulence factor BrkB COP00_20860 PF01699 Sodium/calcium exchanger protein COP00_20865 PF14167 YfkD-like protein COP00_20870 PF04055 Radical SAM superfamily COP00_20870 PF08756 YfkB-like domain COP00_20880 PF01522 Polysaccharide deacetylase COP00_20890 PF00465 Iron-containing alcohol dehydrogenase COP00_20905 PF01544 CorA-like Mg2+ transporter protein COP00_20910 PF00730 HhH-GPD superfamily base excision DNA repair protein COP00_20915 PF05958 tRNA (Uracil-5-)-methyltransferase COP00_20915 PF01938 TRAM domain COP00_20940 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase COP00_20945 PF10925 Protein of unknown function (DUF2680) COP00_20950 PF07690 Major Facilitator Superfamily COP00_20955 PF02378 Phosphotransferase system, EIIC COP00_20955 PF00367 phosphotransferase system, EIIB COP00_20960 PF03123 CAT RNA binding domain COP00_20960 PF00874 PRD domain COP00_20970 PF00676 Dehydrogenase E1 component COP00_20975 PF02780 Transketolase, C-terminal domain COP00_20975 PF02779 Transketolase, pyrimidine binding domain COP00_20985 PF07992 Pyridine nucleotide-disulphide oxidoreductase COP00_20985 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain COP00_20990 PF00158 Sigma-54 interaction domain COP00_20990 PF01590 GAF domain COP00_20990 PF02954 Bacterial regulatory protein, Fis family COP00_20995 PF02694 Uncharacterised BCR, YnfA/UPF0060 family COP00_21000 PF11975 Family 4 glycosyl hydrolase C-terminal domain COP00_21000 PF02056 Family 4 glycosyl hydrolase COP00_21005 PF01380 SIS domain COP00_21005 PF01418 Helix-turn-helix domain, rpiR family COP00_21010 PF02378 Phosphotransferase system, EIIC COP00_21010 PF00367 phosphotransferase system, EIIB COP00_21020 PF01638 HxlR-like helix-turn-helix COP00_21025 PF07681 DoxX COP00_21030 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily COP00_21035 PF04616 Glycosyl hydrolases family 43 COP00_21035 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain COP00_21045 PF12833 Helix-turn-helix domain COP00_21045 PF02311 AraC-like ligand binding domain COP00_21055 PF17922 Tetracyclin repressor-like, C-terminal domain COP00_21055 PF00440 Bacterial regulatory proteins, tetR family COP00_21060 PF07690 Major Facilitator Superfamily COP00_21065 PF02525 Flavodoxin-like fold COP00_21070 PF00293 NUDIX domain COP00_21075 PF12867 DinB superfamily COP00_21080 PF03706 Lysylphosphatidylglycerol synthase TM region COP00_21080 PF09924 Uncharacterised conserved protein (DUF2156) COP00_21085 PF02567 Phenazine biosynthesis-like protein COP00_21090 PF00881 Nitroreductase family COP00_21095 PF14151 YfhD-like protein COP00_21115 PF02631 RecX family COP00_21120 PF08838 Protein of unknown function (DUF1811) COP00_21130 PF08176 Small acid-soluble spore protein K family COP00_21135 PF14043 WVELL protein COP00_21140 PF01266 FAD dependent oxidoreductase COP00_21145 PF00535 Glycosyl transferase family 2 COP00_21155 PF09586 Bacterial membrane protein YfhO COP00_21160 PF04307 LexA-binding, inner membrane-associated putative hydrolase COP00_21165 PF00730 HhH-GPD superfamily base excision DNA repair protein COP00_21165 PF14815 NUDIX domain COP00_21185 PF14182 YgaB-like protein COP00_21190 PF04167 Protein of unknown function (DUF402) COP00_21195 PF00005 ABC transporter COP00_21195 PF00664 ABC transporter transmembrane region COP00_21200 PF08352 Oligopeptide/dipeptide transporter, C-terminal region COP00_21200 PF00005 ABC transporter COP00_21205 PF08352 Oligopeptide/dipeptide transporter, C-terminal region COP00_21205 PF00005 ABC transporter COP00_21210 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle COP00_21225 PF06081 Aromatic acid exporter family member 1 COP00_21230 PF00202 Aminotransferase class-III COP00_21235 PF00578 AhpC/TSA family COP00_21240 PF01475 Ferric uptake regulator family COP00_21245 PF11023 Zinc-ribbon containing domain COP00_21250 PF14540 Nucleotidyltransferase-like COP00_21250 PF18576 Helix-turn-helix domain COP00_21350 PF03129 Anticodon binding domain COP00_21350 PF02824 TGS domain COP00_21350 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) COP00_21350 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain COP00_21370 PF01487 Type I 3-dehydroquinase COP00_21385 PF00005 ABC transporter COP00_21390 PF09084 NMT1/THI5 like COP00_21395 PF00528 Binding-protein-dependent transport system inner membrane component COP00_21400 PF00296 Luciferase-like monooxygenase COP00_21410 PF01381 Helix-turn-helix COP00_21420 PF00005 ABC transporter COP00_21440 PF00253 Ribosomal protein S14p/S29e COP00_21455 PF08331 Domain of unknown function (DUF1730) COP00_21460 PF12671 Putative amidase domain COP00_21465 PF00588 SpoU rRNA Methylase family COP00_21470 PF13171 Protein of unknown function (DUF4004) COP00_21475 PF04519 Polymer-forming cytoskeletal COP00_21485 PF08298 PrkA AAA domain COP00_21485 PF06798 PrkA serine protein kinase C-terminal domain COP00_21490 PF04285 Protein of unknown function (DUF444) COP00_21500 PF07690 Major Facilitator Superfamily COP00_21505 PF03358 NADPH-dependent FMN reductase COP00_21520 PF00392 Bacterial regulatory proteins, gntR family COP00_21525 PF00005 ABC transporter COP00_21530 PF00005 ABC transporter COP00_21535 PF12679 ABC-2 family transporter protein COP00_21540 PF00313 'Cold-shock' DNA-binding domain COP00_21545 PF00005 ABC transporter COP00_21545 PF09383 NIL domain COP00_21550 PF00528 Binding-protein-dependent transport system inner membrane component COP00_21555 PF03180 NLPA lipoprotein COP00_21560 PF00375 Sodium:dicarboxylate symporter family COP00_21570 PF00326 Prolyl oligopeptidase family COP00_21575 PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) COP00_21585 PF07875 Coat F domain COP00_21590 PF00512 His Kinase A (phospho-acceptor) domain COP00_21590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase COP00_21590 PF00989 PAS fold COP00_21590 PF13426 PAS domain COP00_21590 PF13188 PAS domain COP00_21595 PF00565 Staphylococcal nuclease homologue COP00_21595 PF00746 LPXTG cell wall anchor motif COP00_21595 PF02872 5'-nucleotidase, C-terminal domain COP00_21595 PF00149 Calcineurin-like phosphoesterase COP00_21600 PF04203 Sortase domain COP00_21605 PF00571 CBS domain COP00_21605 PF00005 ABC transporter COP00_21610 PF00528 Binding-protein-dependent transport system inner membrane component COP00_21615 PF04069 Substrate binding domain of ABC-type glycine betaine transport system COP00_21620 PF00528 Binding-protein-dependent transport system inner membrane component COP00_21625 PF00849 RNA pseudouridylate synthase COP00_21625 PF01479 S4 domain COP00_21630 PF17326 Family of unknown function (DUF5365) COP00_21635 PF00571 CBS domain COP00_21640 PF13419 Haloacid dehalogenase-like hydrolase COP00_21645 PF00795 Carbon-nitrogen hydrolase COP00_21645 PF00583 Acetyltransferase (GNAT) family COP00_21650 PF00005 ABC transporter COP00_21650 PF12848 ABC transporter COP00_21650 PF16326 ABC transporter C-terminal domain COP00_21665 PF00202 Aminotransferase class-III COP00_21670 PF08240 Alcohol dehydrogenase GroES-like domain COP00_21670 PF00107 Zinc-binding dehydrogenase COP00_21675 PF04309 Glycerol-3-phosphate responsive antiterminator COP00_21680 PF00230 Major intrinsic protein COP00_21685 PF00370 FGGY family of carbohydrate kinases, N-terminal domain COP00_21685 PF02782 FGGY family of carbohydrate kinases, C-terminal domain COP00_21690 PF16901 C-terminal domain of alpha-glycerophosphate oxidase COP00_21690 PF01266 FAD dependent oxidoreductase COP00_21695 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II COP00_21695 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I COP00_21695 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain COP00_21695 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III COP00_21725 PF03358 NADPH-dependent FMN reductase COP00_21730 PF14148 YhdB-like protein COP00_21735 PF13028 Protein of unknown function (DUF3889) COP00_21740 PF02082 Transcriptional regulator COP00_21745 PF00175 Oxidoreductase NAD-binding domain COP00_21745 PF00970 Oxidoreductase FAD-binding domain COP00_21745 PF00042 Globin COP00_21750 PF04293 SpoVR like protein COP00_21755 PF00245 Alkaline phosphatase COP00_21765 PF00877 NlpC/P60 family COP00_21765 PF01476 LysM domain COP00_21770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family COP00_21770 PF03466 LysR substrate binding domain COP00_21775 PF00285 Citrate synthase, C-terminal domain COP00_21785 PF01047 MarR family COP00_21790 PF13520 Amino acid permease COP00_21795 PF00209 Sodium:neurotransmitter symporter family COP00_21805 PF06445 GyrI-like small molecule binding domain COP00_21805 PF12833 Helix-turn-helix domain COP00_21810 PF00155 Aminotransferase class I and II COP00_21810 PF00392 Bacterial regulatory proteins, gntR family COP00_21820 PF17453 Sigma-M inhibitor COP00_21825 PF13800 Sigma factor regulator N-terminal COP00_21825 PF13791 Sigma factor regulator C-terminal COP00_21830 PF08281 Sigma-70, region 4 COP00_21830 PF04542 Sigma-70 region 2 COP00_21835 PF01553 Acyltransferase COP00_21850 PF03471 Transporter associated domain COP00_21850 PF00571 CBS domain COP00_21850 PF01595 Cyclin M transmembrane N-terminal domain COP00_21855 PF13411 MerR HTH family regulatory protein COP00_21860 PF01595 Cyclin M transmembrane N-terminal domain COP00_21860 PF00571 CBS domain COP00_21860 PF03471 Transporter associated domain COP00_21875 PF01520 N-acetylmuramoyl-L-alanine amidase COP00_21875 PF05036 Sporulation related domain COP00_21880 PF05675 Protein of unknown function (DUF817) COP00_21885 PF02537 CrcB-like protein, Camphor Resistance (CrcB) COP00_21890 PF02537 CrcB-like protein, Camphor Resistance (CrcB) COP00_21895 PF03009 Glycerophosphoryl diester phosphodiesterase family COP00_21900 PF17444 Uncharacterized YhdX-like COP00_21905 PF00924 Mechanosensitive ion channel COP00_21910 PF02146 Sir2 family COP00_21920 PF00583 Acetyltransferase (GNAT) family COP00_21925 PF01522 Polysaccharide deacetylase COP00_21930 PF01063 Amino-transferase class IV COP00_21935 PF03553 Na+/H+ antiporter family COP00_21940 PF01263 Aldose 1-epimerase COP00_21945 PF16302 Domain of unknown function (DUF4944) COP00_21965 PF00582 Universal stress protein family COP00_21975 PF00005 ABC transporter COP00_21975 PF00664 ABC transporter transmembrane region COP00_21980 PF00005 ABC transporter COP00_21980 PF00664 ABC transporter transmembrane region COP00_21985 PF13460 NAD(P)H-binding COP00_21990 PF00269 Small, acid-soluble spore proteins, alpha/beta type COP00_22000 PF00005 ABC transporter COP00_22000 PF17912 MalK OB fold domain COP00_22000 PF03459 TOBE domain COP00_22005 PF13556 PucR C-terminal helix-turn-helix domain COP00_22010 PF17277 Family of unknown function (DUF5342) COP00_22020 PF14398 YheC/D like ATP-grasp COP00_22025 PF04286 Protein of unknown function (DUF445) COP00_22030 PF06133 Control of competence regulator ComK, YlbF/YmcA COP00_22040 PF04055 Radical SAM superfamily COP00_22045 PF01327 Polypeptide deformylase COP00_22050 PF00999 Sodium/hydrogen exchanger family COP00_22055 PF02080 TrkA-C domain COP00_22065 PF00378 Enoyl-CoA hydratase/isomerase COP00_22075 PF14120 YhzD-like protein COP00_22080 PF13732 Domain of unknown function (DUF4162) COP00_22080 PF00005 ABC transporter COP00_22090 PF00149 Calcineurin-like phosphoesterase COP00_22095 PF13514 AAA domain COP00_22100 PF01966 HD domain COP00_22105 PF14147 Sporulation protein YhaL COP00_22115 PF09680 Family of unknown function COP00_22130 PF11667 Putative zincin peptidase COP00_22135 PF08963 Protein of unknown function (DUF1878) COP00_22140 PF01047 MarR family COP00_22145 PF12732 YtxH-like protein COP00_22155 PF17099 Tryptophan transporter TrpP COP00_22160 PF00266 Aminotransferase class-V COP00_22165 PF01230 HIT domain COP00_22175 PF00005 ABC transporter COP00_22180 PF05975 Bacterial ABC transporter protein EcsB COP00_22185 PF12787 EcsC protein family COP00_22190 PF01546 Peptidase family M20/M25/M40 COP00_22190 PF07687 Peptidase dimerisation domain COP00_22200 PF03992 Antibiotic biosynthesis monooxygenase COP00_22205 PF00905 Penicillin binding protein transpeptidase domain COP00_22205 PF00912 Transglycosylase COP00_22210 PF01208 Uroporphyrinogen decarboxylase (URO-D) COP00_22225 PF00440 Bacterial regulatory proteins, tetR family COP00_22225 PF17932 Tetracyclin repressor-like, C-terminal domain COP00_22235 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III COP00_22235 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal COP00_22240 PF05343 M42 glutamyl aminopeptidase COP00_22245 PF00375 Sodium:dicarboxylate symporter family COP00_22250 PF14149 YhfH-like protein COP00_22255 PF12706 Beta-lactamase superfamily domain COP00_22260 PF03099 Biotin/lipoate A/B protein ligase family COP00_22260 PF10437 Bacterial lipoate protein ligase C-terminus COP00_22265 PF00501 AMP-binding enzyme COP00_22265 PF13193 AMP-binding enzyme C-terminal domain COP00_22275 PF07883 Cupin domain COP00_22275 PF01381 Helix-turn-helix COP00_22290 PF01435 Peptidase family M48 COP00_22290 PF16491 CAAX prenyl protease N-terminal, five membrane helices COP00_22305 PF01497 Periplasmic binding protein COP00_22310 PF01032 FecCD transport family COP00_22315 PF01032 FecCD transport family COP00_22320 PF00300 Histidine phosphatase superfamily (branch 1) COP00_22325 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain COP00_22330 PF00355 Rieske [2Fe-2S] domain COP00_22330 PF01266 FAD dependent oxidoreductase COP00_22340 PF08858 IDEAL domain COP00_22345 PF06338 ComK protein COP00_22360 PF09335 SNARE associated Golgi protein COP00_22365 PF10502 Signal peptidase, peptidase S26 COP00_22370 PF00082 Subtilase family COP00_22375 PF18801 response regulator aspartate phosphatase H, N terminal COP00_22400 PF02056 Family 4 glycosyl hydrolase COP00_22400 PF11975 Family 4 glycosyl hydrolase C-terminal domain COP00_22405 PF05145 Transition state regulatory protein AbrB COP00_22410 PF11007 Spore coat associated protein JA (CotJA) COP00_22415 PF12652 CotJB protein COP00_22420 PF05067 Manganese containing catalase COP00_22425 PF13193 AMP-binding enzyme C-terminal domain COP00_22425 PF00501 AMP-binding enzyme COP00_22435 PF04294 VanW like protein COP00_22440 PF00512 His Kinase A (phospho-acceptor) domain COP00_22440 PF16736 Single Cache-like COP00_22440 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase COP00_22440 PF00989 PAS fold COP00_22450 PF02915 Rubrerythrin COP00_22460 PF00528 Binding-protein-dependent transport system inner membrane component COP00_22465 PF12705 PD-(D/E)XK nuclease superfamily COP00_22470 PF00580 UvrD/REP helicase N-terminal domain COP00_22470 PF13361 UvrD-like helicase C-terminal domain COP00_22470 PF12705 PD-(D/E)XK nuclease superfamily COP00_22475 PF00149 Calcineurin-like phosphoesterase COP00_22475 PF12320 Type 5 capsule protein repressor C-terminal domain COP00_22480 PF13476 AAA domain COP00_22485 PF10676 Spore germination protein gerPA/gerPF COP00_22500 PF10737 Spore germination protein GerPC COP00_22505 PF10803 Spore germination GerPB COP00_22510 PF10676 Spore germination protein gerPA/gerPF COP00_22515 PF12650 Domain of unknown function (DUF3784) COP00_22520 PF09388 Spo0E like sporulation regulatory protein COP00_22535 PF01557 Fumarylacetoacetate (FAA) hydrolase family COP00_22540 PF03193 RsgA GTPase COP00_22545 PF07457 Protein of unknown function (DUF1516) COP00_22550 PF10949 Protein of unknown function (DUF2777) COP00_22555 PF13537 Glutamine amidotransferase domain COP00_22555 PF00733 Asparagine synthase COP00_22560 PF01554 MatE COP00_22565 PF12833 Helix-turn-helix domain COP00_22565 PF02311 AraC-like ligand binding domain COP00_22580 PF01209 ubiE/COQ5 methyltransferase family COP00_22595 PF03323 Bacillus/Clostridium GerA spore germination protein COP00_22605 PF00155 Aminotransferase class I and II COP00_22605 PF00392 Bacterial regulatory proteins, gntR family COP00_22610 PF00202 Aminotransferase class-III COP00_22615 PF00282 Pyridoxal-dependent decarboxylase conserved domain COP00_22620 PF06276 Ferric iron reductase FhuF-like transporter COP00_22620 PF04183 IucA / IucC family COP00_22630 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) COP00_22635 PF06276 Ferric iron reductase FhuF-like transporter COP00_22635 PF04183 IucA / IucC family COP00_22640 PF13673 Acetyltransferase (GNAT) domain COP00_22645 PF00809 Pterin binding enzyme COP00_22645 PF02574 Homocysteine S-methyltransferase COP00_22645 PF02607 B12 binding domain COP00_22645 PF02310 B12 binding domain COP00_22645 PF02965 Vitamin B12 dependent methionine synthase, activation domain COP00_22650 PF02574 Homocysteine S-methyltransferase COP00_22650 PF02219 Methylenetetrahydrofolate reductase COP00_22655 PF04461 Protein of unknown function (DUF520) COP00_22660 PF17783 CvfB-like winged helix domain COP00_22660 PF13509 S1 domain COP00_22675 PF02645 Uncharacterised protein, DegV family COG1307 COP00_22680 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 COP00_22680 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) COP00_22685 PF12690 Intracellular proteinase inhibitor COP00_22690 PF00478 IMP dehydrogenase / GMP reductase domain COP00_22695 PF12758 Protein of unknown function (DUF3813) COP00_22705 PF00326 Prolyl oligopeptidase family COP00_22710 PF01883 Iron-sulfur cluster assembly protein COP00_22720 PF01118 Semialdehyde dehydrogenase, NAD binding domain COP00_22720 PF02774 Semialdehyde dehydrogenase, dimerisation domain COP00_22725 PF01960 ArgJ family COP00_22730 PF00696 Amino acid kinase family COP00_22735 PF00202 Aminotransferase class-III COP00_22740 PF00117 Glutamine amidotransferase class-I COP00_22740 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain COP00_22745 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain COP00_22745 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain COP00_22750 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain COP00_22750 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain COP00_22755 PF14168 YjzC-like protein COP00_22760 PF11151 Protein of unknown function (DUF2929) COP00_22775 PF02608 ABC transporter substrate-binding protein PnrA-like COP00_22780 PF10815 ComZ COP00_22790 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III COP00_22790 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal COP00_22795 PF02801 Beta-ketoacyl synthase, C-terminal domain COP00_22795 PF00109 Beta-ketoacyl synthase, N-terminal domain COP00_22800 PF10026 Predicted Zn-dependent protease (DUF2268) COP00_22805 PF08352 Oligopeptide/dipeptide transporter, C-terminal region COP00_22805 PF00005 ABC transporter COP00_22810 PF08352 Oligopeptide/dipeptide transporter, C-terminal region COP00_22810 PF00005 ABC transporter COP00_22815 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle COP00_22820 PF00528 Binding-protein-dependent transport system inner membrane component COP00_22825 PF12911 N-terminal TM domain of oligopeptide transport permease C COP00_22825 PF00528 Binding-protein-dependent transport system inner membrane component COP00_22830 PF12227 Protein of unknown function (DUF3603) COP00_22835 PF00579 tRNA synthetases class I (W and Y) COP00_22845 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle COP00_22850 PF00528 Binding-protein-dependent transport system inner membrane component COP00_22855 PF12911 N-terminal TM domain of oligopeptide transport permease C COP00_22855 PF00528 Binding-protein-dependent transport system inner membrane component COP00_22860 PF00005 ABC transporter COP00_22860 PF08352 Oligopeptide/dipeptide transporter, C-terminal region COP00_22865 PF08352 Oligopeptide/dipeptide transporter, C-terminal region COP00_22865 PF00005 ABC transporter COP00_22870 PF13508 Acetyltransferase (GNAT) domain COP00_22875 PF03960 ArsC family COP00_22880 PF03741 Integral membrane protein TerC family COP00_22885 PF05389 Negative regulator of genetic competence (MecA) COP00_22890 PF06054 Competence protein CoiA-like family COP00_22895 PF08439 Oligopeptidase F COP00_22895 PF01432 Peptidase family M3 COP00_22915 PF01152 Bacterial-like globin COP00_22920 PF01464 Transglycosylase SLT domain COP00_22925 PF01928 CYTH domain COP00_22935 PF04607 Region found in RelA / SpoT proteins COP00_22940 PF01513 ATP-NAD kinase COP00_22945 PF00849 RNA pseudouridylate synthase COP00_22950 PF00149 Calcineurin-like phosphoesterase COP00_22955 PF02254 TrkA-N domain COP00_22955 PF02080 TrkA-C domain COP00_22955 PF00999 Sodium/hydrogen exchanger family COP00_22960 PF03070 TENA/THI-4/PQQC family COP00_22965 PF02581 Thiamine monophosphate synthase COP00_22970 PF01266 FAD dependent oxidoreductase COP00_22975 PF02597 ThiS family COP00_22985 PF00899 ThiF family COP00_22990 PF08543 Phosphomethylpyrimidine kinase COP00_23000 PF14153 Spore coat protein CotO COP00_23005 PF10612 Spore coat protein Z COP00_23010 PF10612 Spore coat protein Z COP00_23015 PF07552 Spore Coat Protein X and V domain COP00_23025 PF07552 Spore Coat Protein X and V domain COP00_23030 PF07098 Protein of unknown function (DUF1360) COP00_23045 PF14069 Stage VI sporulation protein F COP00_23050 PF00580 UvrD/REP helicase N-terminal domain COP00_23050 PF13361 UvrD-like helicase C-terminal domain COP00_23060 PF09335 SNARE associated Golgi protein COP00_23065 PF16363 GDP-mannose 4,6 dehydratase COP00_23075 PF04138 GtrA-like protein COP00_23080 PF13673 Acetyltransferase (GNAT) domain COP00_23090 PF00756 Putative esterase COP00_23095 PF01053 Cys/Met metabolism PLP-dependent enzyme COP00_23100 PF01053 Cys/Met metabolism PLP-dependent enzyme COP00_23125 PF03992 Antibiotic biosynthesis monooxygenase COP00_23135 PF00089 Trypsin COP00_23160 PF00106 short chain dehydrogenase COP00_23165 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily COP00_23185 PF08386 TAP-like protein COP00_23185 PF00561 alpha/beta hydrolase fold COP00_23205 PF13520 Amino acid permease COP00_23210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family COP00_23210 PF03466 LysR substrate binding domain COP00_23215 PF00667 FAD binding domain COP00_23215 PF00258 Flavodoxin COP00_23215 PF00175 Oxidoreductase NAD-binding domain COP00_23220 PF01077 Nitrite and sulphite reductase 4Fe-4S domain COP00_23220 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain COP00_23230 PF03466 LysR substrate binding domain COP00_23230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family COP00_23240 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily COP00_23245 PF16800 IseA DL-endopeptidase inhibitor COP00_23250 PF06725 3D domain COP00_23250 PF01476 LysM domain COP00_23260 PF11962 Peptidase_G2, IMC autoproteolytic cleavage domain COP00_23260 PF12708 Pectate lyase superfamily protein COP00_23265 PF07690 Major Facilitator Superfamily COP00_23270 PF00440 Bacterial regulatory proteins, tetR family COP00_23380 PF11122 Inner spore coat protein D COP00_23420 PF03354 Phage Terminase COP00_23490 PF13457 GW (Gly-Tryp) dipeptide domain COP00_23490 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase COP00_23495 PF12708 Pectate lyase superfamily protein COP00_23495 PF11962 Peptidase_G2, IMC autoproteolytic cleavage domain COP00_23515 PF05105 Bacteriophage holin family COP00_23520 PF01183 Glycosyl hydrolases family 25 COP00_23520 PF08239 Bacterial SH3 domain COP00_23530 PF14449 Pre-toxin TG COP00_23530 PF04740 LXG domain of WXG superfamily COP00_23530 PF14410 HNH/ENDO VII superfamily nuclease with conserved GHE residues COP00_23535 PF01726 LexA DNA binding domain COP00_23535 PF00717 Peptidase S24-like COP00_23545 PF04688 SPP1 phage holin COP00_23550 PF01471 Putative peptidoglycan binding domain COP00_23550 PF01510 N-acetylmuramoyl-L-alanine amidase COP00_23580 PF14449 Pre-toxin TG COP00_23580 PF04740 LXG domain of WXG superfamily COP00_23595 PF05908 Poly-gamma-glutamate hydrolase COP00_23600 PF06114 IrrE N-terminal-like domain COP00_23605 PF01381 Helix-turn-helix COP00_23625 PF01695 IstB-like ATP binding protein COP00_23635 PF17356 Phage-like element PBSX protein XtrA COP00_23640 PF08281 Sigma-70, region 4 COP00_23650 PF03009 Glycerophosphoryl diester phosphodiesterase family COP00_23660 PF07729 FCD domain COP00_23660 PF00392 Bacterial regulatory proteins, gntR family COP00_23665 PF00107 Zinc-binding dehydrogenase COP00_23665 PF08240 Alcohol dehydrogenase GroES-like domain COP00_23670 PF03786 D-mannonate dehydratase (UxuA) COP00_23675 PF00106 short chain dehydrogenase COP00_23690 PF07690 Major Facilitator Superfamily COP00_23695 PF14185 Antitoxin SpoIISB, type II toxin-antitoxin system COP00_23700 PF14171 Toxin SpoIISA, type II toxin-antitoxin system COP00_23705 PF01384 Phosphate transporter family COP00_23710 PF01865 Protein of unknown function DUF47 COP00_23725 PF00528 Binding-protein-dependent transport system inner membrane component COP00_23730 PF00528 Binding-protein-dependent transport system inner membrane component COP00_23735 PF00005 ABC transporter COP00_23735 PF17850 CysA C-terminal regulatory domain COP00_23735 PF12857 TOBE-like domain COP00_23740 PF04854 Protein of unknown function, DUF624 COP00_23745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase COP00_23745 PF00672 HAMP domain COP00_23745 PF02743 Cache domain COP00_23745 PF06580 Histidine kinase COP00_23750 PF00072 Response regulator receiver domain COP00_23750 PF12833 Helix-turn-helix domain COP00_23765 PF00528 Binding-protein-dependent transport system inner membrane component COP00_23770 PF07470 Glycosyl Hydrolase Family 88 COP00_23775 PF12833 Helix-turn-helix domain COP00_23780 PF13472 GDSL-like Lipase/Acylhydrolase family COP00_23785 PF09224 Domain of unknown function (DUF1961) COP00_23790 PF04854 Protein of unknown function, DUF624 COP00_23795 PF18370 Rhamnogalacturonan I lyases beta-sheet domain COP00_23800 PF18370 Rhamnogalacturonan I lyases beta-sheet domain COP00_23800 PF01839 FG-GAP repeat COP00_23805 PF16123 Hydroxyacylglutathione hydrolase C-terminus COP00_23805 PF00753 Metallo-beta-lactamase superfamily COP00_23810 PF00657 GDSL-like Lipase/Acylhydrolase COP00_23815 PF08532 Beta-galactosidase trimerisation domain COP00_23815 PF02449 Beta-galactosidase COP00_23815 PF08533 Beta-galactosidase C-terminal domain COP00_23825 PF01547 Bacterial extracellular solute-binding protein COP00_23830 PF00528 Binding-protein-dependent transport system inner membrane component COP00_23835 PF00528 Binding-protein-dependent transport system inner membrane component COP00_23840 PF13520 Amino acid permease COP00_23845 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily COP00_23850 PF13180 PDZ domain COP00_23855 PF03807 NADP oxidoreductase coenzyme F420-dependent COP00_23855 PF14748 Pyrroline-5-carboxylate reductase dimerisation COP00_23860 PF04951 D-aminopeptidase COP00_23865 PF00528 Binding-protein-dependent transport system inner membrane component COP00_23870 PF12911 N-terminal TM domain of oligopeptide transport permease C COP00_23870 PF00528 Binding-protein-dependent transport system inner membrane component COP00_23875 PF08352 Oligopeptide/dipeptide transporter, C-terminal region COP00_23875 PF00005 ABC transporter COP00_23885 PF02016 LD-carboxypeptidase N-terminal domain COP00_23885 PF17676 LD-carboxypeptidase C-terminal domain COP00_23890 PF13378 Enolase C-terminal domain-like COP00_23890 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain COP00_23895 PF00877 NlpC/P60 family COP00_23900 PF08352 Oligopeptide/dipeptide transporter, C-terminal region COP00_23900 PF00005 ABC transporter COP00_23915 PF03061 Thioesterase superfamily COP00_23920 PF00544 Pectate lyase COP00_23925 PF12867 DinB superfamily COP00_23930 PF00893 Small Multidrug Resistance protein COP00_23935 PF00893 Small Multidrug Resistance protein COP00_23940 PF01842 ACT domain COP00_23940 PF00551 Formyl transferase COP00_23945 PF01472 PUA domain COP00_23945 PF00696 Amino acid kinase family COP00_23950 PF00171 Aldehyde dehydrogenase family COP00_23955 PF02566 OsmC-like protein COP00_23960 PF01047 MarR family COP00_23965 PF02566 OsmC-like protein COP00_23975 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region COP00_23995 PF08267 Cobalamin-independent synthase, N-terminal domain COP00_23995 PF01717 Cobalamin-independent synthase, Catalytic domain COP00_24000 PF00082 Subtilase family COP00_24005 PF00571 CBS domain COP00_24005 PF01769 Divalent cation transporter COP00_24005 PF03448 MgtE intracellular N domain COP00_24015 PF13411 MerR HTH family regulatory protein COP00_24030 PF01047 MarR family COP00_24035 PF01068 ATP dependent DNA ligase domain COP00_24040 PF02735 Ku70/Ku80 beta-barrel domain COP00_24050 PF09335 SNARE associated Golgi protein COP00_24055 PF03741 Integral membrane protein TerC family COP00_24060 PF04542 Sigma-70 region 2 COP00_24065 PF12791 Anti-sigma factor N-terminus COP00_24070 PF00269 Small, acid-soluble spore proteins, alpha/beta type COP00_24075 PF08876 Domain of unknown function (DUF1836) COP00_24080 PF01435 Peptidase family M48 COP00_24085 PF02386 Cation transport protein COP00_24090 PF00905 Penicillin binding protein transpeptidase domain COP00_24090 PF05223 NTF2-like N-terminal transpeptidase domain COP00_24090 PF03717 Penicillin-binding Protein dimerisation domain COP00_24105 PF01757 Acyltransferase family COP00_24110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase COP00_24110 PF00512 His Kinase A (phospho-acceptor) domain COP00_24110 PF00989 PAS fold COP00_24110 PF13188 PAS domain COP00_24110 PF13426 PAS domain COP00_24115 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain COP00_24115 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain COP00_24120 PF01008 Initiation factor 2 subunit family COP00_24125 PF01636 Phosphotransferase enzyme family COP00_24130 PF00795 Carbon-nitrogen hydrolase COP00_24135 PF00155 Aminotransferase class I and II COP00_24140 PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain COP00_24140 PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain COP00_24150 PF03079 ARD/ARD' family COP00_24155 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily COP00_24160 PF06803 Protein of unknown function (DUF1232) COP00_24170 PF00512 His Kinase A (phospho-acceptor) domain COP00_24170 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase COP00_24170 PF02743 Cache domain COP00_24175 PF01047 MarR family COP00_24180 PF00691 OmpA family COP00_24180 PF13677 Membrane MotB of proton-channel complex MotA/MotB COP00_24185 PF01618 MotA/TolQ/ExbB proton channel family COP00_24190 PF17871 AAA lid domain COP00_24190 PF07724 AAA domain (Cdc48 subfamily) COP00_24190 PF10431 C-terminal, D2-small domain, of ClpB protein COP00_24190 PF00004 ATPase family associated with various cellular activities (AAA) COP00_24200 PF06508 Queuosine biosynthesis protein QueC COP00_24205 PF01242 6-pyruvoyl tetrahydropterin synthase COP00_24210 PF04055 Radical SAM superfamily COP00_24215 PF14489 QueF-like protein COP00_24275 PF02498 BRO family, N-terminal domain COP00_24275 PF10548 P22AR C-terminal domain COP00_24335 PF01367 5'-3' exonuclease, C-terminal SAM fold COP00_24335 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain COP00_24335 PF00476 DNA polymerase family A COP00_24335 PF09281 Taq polymerase, exonuclease COP00_24345 PF02075 Crossover junction endodeoxyribonuclease RuvC COP00_24370 PF02867 Ribonucleotide reductase, barrel domain COP00_24370 PF00317 Ribonucleotide reductase, all-alpha domain COP00_24370 PF08343 Ribonucleotide reductase N-terminal COP00_24380 PF00268 Ribonucleotide reductase, small chain COP00_24390 PF00692 dUTPase COP00_24400 PF02511 Thymidylate synthase complementing protein COP00_24405 PF06725 3D domain COP00_24420 PF00145 C-5 cytosine-specific DNA methylase COP00_24520 PF00574 Clp protease COP00_24530 PF03065 Glycosyl hydrolase family 57 COP00_24530 PF00041 Fibronectin type III domain COP00_24530 PF03423 Carbohydrate binding domain (family 25)