COP00_14615 4aa98af80111d0562b4da6dff7f84629 226 Pfam PF07729 FCD domain 84 210 1.1E-22 T 13-10-2018 IPR011711 GntR, C-terminal COP00_14615 4aa98af80111d0562b4da6dff7f84629 226 SMART SM00895 84 210 1.7E-14 T 13-10-2018 IPR011711 GntR, C-terminal COP00_14615 4aa98af80111d0562b4da6dff7f84629 226 Gene3D G3DSA:1.10.10.10 2 74 2.4E-17 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_14615 4aa98af80111d0562b4da6dff7f84629 226 Pfam PF00392 Bacterial regulatory proteins, gntR family 16 73 1.4E-12 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 COP00_14615 4aa98af80111d0562b4da6dff7f84629 226 SMART SM00345 16 74 2.1E-7 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 COP00_14615 4aa98af80111d0562b4da6dff7f84629 226 SUPERFAMILY SSF48008 79 217 4.71E-23 T 13-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal COP00_14615 4aa98af80111d0562b4da6dff7f84629 226 Gene3D G3DSA:1.20.120.530 79 223 1.0E-25 T 13-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal COP00_14615 4aa98af80111d0562b4da6dff7f84629 226 SUPERFAMILY SSF46785 6 78 1.32E-14 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_07320 f491fca621894d292eb637963123f9e7 196 ProSitePatterns PS01071 grpE protein signature. 151 194 - T 13-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 COP00_07320 f491fca621894d292eb637963123f9e7 196 Pfam PF01025 GrpE 34 196 7.0E-55 T 13-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 COP00_07320 f491fca621894d292eb637963123f9e7 196 PRINTS PR00773 GrpE protein signature 148 163 1.2E-31 T 13-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 COP00_07320 f491fca621894d292eb637963123f9e7 196 PRINTS PR00773 GrpE protein signature 66 82 1.2E-31 T 13-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 COP00_07320 f491fca621894d292eb637963123f9e7 196 PRINTS PR00773 GrpE protein signature 175 194 1.2E-31 T 13-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 COP00_07320 f491fca621894d292eb637963123f9e7 196 PRINTS PR00773 GrpE protein signature 94 109 1.2E-31 T 13-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 COP00_07320 f491fca621894d292eb637963123f9e7 196 Gene3D G3DSA:3.90.20.20 26 138 1.0E-26 T 13-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 COP00_07320 f491fca621894d292eb637963123f9e7 196 SUPERFAMILY SSF58014 45 140 2.22E-26 T 13-10-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 COP00_07320 f491fca621894d292eb637963123f9e7 196 Hamap MF_01151 Protein GrpE [grpE]. 6 196 21.907 T 13-10-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 COP00_07320 f491fca621894d292eb637963123f9e7 196 Gene3D G3DSA:2.30.22.10 140 196 1.3E-25 T 13-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 COP00_07320 f491fca621894d292eb637963123f9e7 196 SUPERFAMILY SSF51064 141 196 1.44E-19 T 13-10-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 COP00_06710 640c6709363826f53268585c3dd8f3d3 278 Hamap MF_02118 Octanoyltransferase LipM [lipM]. 3 278 67.866 T 13-10-2018 IPR024898 Octanoyltransferase LipM GO:0009107|GO:0009249|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 COP00_06710 640c6709363826f53268585c3dd8f3d3 278 Pfam PF03099 Biotin/lipoate A/B protein ligase family 52 189 5.5E-29 T 13-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 COP00_06710 640c6709363826f53268585c3dd8f3d3 278 Gene3D G3DSA:3.30.930.10 5 278 5.2E-71 T 13-10-2018 COP00_06710 640c6709363826f53268585c3dd8f3d3 278 SUPERFAMILY SSF55681 5 278 6.21E-71 T 13-10-2018 COP00_02410 2c68616dfa59b16f2328e13c7d281d1c 126 Gene3D G3DSA:1.20.5.320 41 92 3.4E-8 T 13-10-2018 COP00_01085 b9dcdead53f60a7591a6b77db8c4234d 291 Pfam PF03755 YicC-like family, N-terminal region 2 156 1.1E-38 T 13-10-2018 IPR013527 YicC-like, N-terminal COP00_01085 b9dcdead53f60a7591a6b77db8c4234d 291 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 1 291 4.8E-109 T 13-10-2018 IPR005229 Conserved hypothetical protein CHP00255 COP00_01085 b9dcdead53f60a7591a6b77db8c4234d 291 Pfam PF08340 Domain of unknown function (DUF1732) 207 291 1.4E-37 T 13-10-2018 IPR013551 Domain of unknown function DUF1732 COP00_00675 6c28a90537865ed629cdaeb733e05198 1147 Gene3D G3DSA:3.10.600.10 466 505 4.0E-6 T 13-10-2018 COP00_00675 6c28a90537865ed629cdaeb733e05198 1147 TIGRFAM TIGR01235 pyruv_carbox: pyruvate carboxylase 8 1145 0.0 T 13-10-2018 IPR005930 Pyruvate carboxylase GO:0004736|GO:0005524|GO:0006090|GO:0006094|GO:0009374 KEGG: 00020+6.4.1.1|KEGG: 00620+6.4.1.1|KEGG: 00720+6.4.1.1|MetaCyc: PWY-5750|MetaCyc: PWY-6142|MetaCyc: PWY-6146|Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 COP00_00675 6c28a90537865ed629cdaeb733e05198 1147 SUPERFAMILY SSF89000 834 1010 3.02E-59 T 13-10-2018 COP00_00675 6c28a90537865ed629cdaeb733e05198 1147 Pfam PF02785 Biotin carboxylase C-terminal domain 346 453 1.4E-32 T 13-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 COP00_00675 6c28a90537865ed629cdaeb733e05198 1147 PIRSF PIRSF001594 1 1147 0.0 T 13-10-2018 IPR005930 Pyruvate carboxylase GO:0004736|GO:0005524|GO:0006090|GO:0006094|GO:0009374 KEGG: 00020+6.4.1.1|KEGG: 00620+6.4.1.1|KEGG: 00720+6.4.1.1|MetaCyc: PWY-5750|MetaCyc: PWY-6142|MetaCyc: PWY-6146|Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 COP00_00675 6c28a90537865ed629cdaeb733e05198 1147 Gene3D G3DSA:3.30.470.130 1 461 2.1E-197 T 13-10-2018 COP00_00675 6c28a90537865ed629cdaeb733e05198 1147 SUPERFAMILY SSF51246 341 460 8.89E-38 T 13-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 COP00_00675 6c28a90537865ed629cdaeb733e05198 1147 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 290 297 - T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 COP00_00675 6c28a90537865ed629cdaeb733e05198 1147 Pfam PF00364 Biotin-requiring enzyme 1079 1145 2.7E-17 T 13-10-2018 IPR000089 Biotin/lipoyl attachment COP00_00675 6c28a90537865ed629cdaeb733e05198 1147 Gene3D G3DSA:3.20.20.70 514 818 1.0E-289 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 COP00_00675 6c28a90537865ed629cdaeb733e05198 1147 SMART SM00878 346 453 2.8E-51 T 13-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 COP00_00675 6c28a90537865ed629cdaeb733e05198 1147 Gene3D G3DSA:1.10.472.90 819 943 1.0E-289 T 13-10-2018 COP00_00675 6c28a90537865ed629cdaeb733e05198 1147 SUPERFAMILY SSF51569 526 837 1.43E-82 T 13-10-2018 COP00_00675 6c28a90537865ed629cdaeb733e05198 1147 Pfam PF00289 Biotin carboxylase, N-terminal domain 6 114 1.1E-42 T 13-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 COP00_00675 6c28a90537865ed629cdaeb733e05198 1147 Gene3D G3DSA:1.10.10.2790 944 979 1.0E-289 T 13-10-2018 COP00_00675 6c28a90537865ed629cdaeb733e05198 1147 Gene3D G3DSA:2.40.50.100 1069 1147 5.6E-24 T 13-10-2018 COP00_00675 6c28a90537865ed629cdaeb733e05198 1147 Pfam PF00682 HMGL-like 534 806 1.9E-27 T 13-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 COP00_00675 6c28a90537865ed629cdaeb733e05198 1147 SUPERFAMILY SSF56059 88 333 9.9E-72 T 13-10-2018 COP00_00675 6c28a90537865ed629cdaeb733e05198 1147 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 120 327 3.0E-79 T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 COP00_00675 6c28a90537865ed629cdaeb733e05198 1147 SUPERFAMILY SSF51230 1069 1145 3.27E-21 T 13-10-2018 IPR011053 Single hybrid motif COP00_00675 6c28a90537865ed629cdaeb733e05198 1147 Gene3D G3DSA:3.10.600.10 507 1061 1.0E-289 T 13-10-2018 COP00_00675 6c28a90537865ed629cdaeb733e05198 1147 SUPERFAMILY SSF52440 4 117 7.19E-45 T 13-10-2018 IPR016185 Pre-ATP-grasp domain superfamily COP00_00675 6c28a90537865ed629cdaeb733e05198 1147 Pfam PF02436 Conserved carboxylase domain 829 1029 1.6E-77 T 13-10-2018 IPR003379 Carboxylase, conserved domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599|Reactome: R-HSA-70263 COP00_18730 06217277713e9d3f97302017f4f3547b 253 Gene3D G3DSA:3.20.20.370 2 253 2.5E-107 T 13-10-2018 COP00_18730 06217277713e9d3f97302017f4f3547b 253 Hamap MF_00691 UPF0271 protein YbgL [ybgL]. 2 246 47.459 T 13-10-2018 IPR005501 UPF0271 family, LamB/YcsF/PxpA KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 COP00_18730 06217277713e9d3f97302017f4f3547b 253 SUPERFAMILY SSF88713 3 251 4.08E-103 T 13-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 COP00_18730 06217277713e9d3f97302017f4f3547b 253 Pfam PF03746 LamB/YcsF family 4 242 2.1E-106 T 13-10-2018 IPR005501 UPF0271 family, LamB/YcsF/PxpA KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 COP00_04600 2595806e84a073ac8239b5ce54640165 591 Pfam PF00271 Helicase conserved C-terminal domain 220 323 5.2E-18 T 13-10-2018 IPR001650 Helicase, C-terminal COP00_04600 2595806e84a073ac8239b5ce54640165 591 Pfam PF16124 RecQ zinc-binding 335 398 2.7E-15 T 13-10-2018 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain COP00_04600 2595806e84a073ac8239b5ce54640165 591 SUPERFAMILY SSF46785 397 538 1.21E-35 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_04600 2595806e84a073ac8239b5ce54640165 591 Pfam PF00270 DEAD/DEAH box helicase 20 181 4.7E-19 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 COP00_04600 2595806e84a073ac8239b5ce54640165 591 Gene3D G3DSA:1.10.10.10 334 510 2.4E-46 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_04600 2595806e84a073ac8239b5ce54640165 591 SMART SM00341 513 591 4.0E-20 T 13-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 COP00_04600 2595806e84a073ac8239b5ce54640165 591 SMART SM00490 243 324 1.6E-27 T 13-10-2018 IPR001650 Helicase, C-terminal COP00_04600 2595806e84a073ac8239b5ce54640165 591 Gene3D G3DSA:1.10.150.80 511 591 3.3E-25 T 13-10-2018 COP00_04600 2595806e84a073ac8239b5ce54640165 591 Pfam PF09382 RQC domain 403 509 5.8E-31 T 13-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 COP00_04600 2595806e84a073ac8239b5ce54640165 591 SMART SM00487 14 211 1.8E-32 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain COP00_04600 2595806e84a073ac8239b5ce54640165 591 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 8 457 2.9E-141 T 13-10-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 COP00_04600 2595806e84a073ac8239b5ce54640165 591 Gene3D G3DSA:3.40.50.300 1 201 4.7E-74 T 13-10-2018 COP00_04600 2595806e84a073ac8239b5ce54640165 591 Pfam PF00570 HRDC domain 517 582 2.4E-22 T 13-10-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 COP00_04600 2595806e84a073ac8239b5ce54640165 591 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 7 585 1.9E-228 T 13-10-2018 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 COP00_04600 2595806e84a073ac8239b5ce54640165 591 SUPERFAMILY SSF52540 58 346 1.37E-60 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_04600 2595806e84a073ac8239b5ce54640165 591 SUPERFAMILY SSF47819 516 590 1.98E-25 T 13-10-2018 IPR010997 HRDC-like superfamily GO:0000166|GO:0003824|GO:0044237 COP00_04600 2595806e84a073ac8239b5ce54640165 591 SMART SM00956 405 508 2.0E-41 T 13-10-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 COP00_04600 2595806e84a073ac8239b5ce54640165 591 Gene3D G3DSA:3.40.50.300 202 333 4.8E-39 T 13-10-2018 COP00_05615 b57ebd2b7d201d471b8ea399c4af4c92 371 Gene3D G3DSA:1.10.3660.10 185 299 1.6E-36 T 13-10-2018 COP00_05615 b57ebd2b7d201d471b8ea399c4af4c92 371 Pfam PF02153 Prephenate dehydrogenase 20 279 8.4E-90 T 13-10-2018 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 COP00_05615 b57ebd2b7d201d471b8ea399c4af4c92 371 Pfam PF01842 ACT domain 301 343 2.5E-10 T 13-10-2018 IPR002912 ACT domain COP00_05615 b57ebd2b7d201d471b8ea399c4af4c92 371 SUPERFAMILY SSF48179 178 287 8.84E-36 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 COP00_05615 b57ebd2b7d201d471b8ea399c4af4c92 371 SUPERFAMILY SSF55021 297 361 4.58E-9 T 13-10-2018 COP00_05615 b57ebd2b7d201d471b8ea399c4af4c92 371 Gene3D G3DSA:3.40.50.720 3 183 1.1E-52 T 13-10-2018 COP00_05615 b57ebd2b7d201d471b8ea399c4af4c92 371 Gene3D G3DSA:3.30.70.260 300 366 1.9E-7 T 13-10-2018 COP00_05615 b57ebd2b7d201d471b8ea399c4af4c92 371 SUPERFAMILY SSF51735 8 174 9.86E-41 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily COP00_03650 360a89c4857f09d161ba98393c98d687 908 Gene3D G3DSA:3.30.499.10 381 605 1.5E-100 T 13-10-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 KEGG: 00290+4.2.1.33 COP00_03650 360a89c4857f09d161ba98393c98d687 908 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 24 906 0.0 T 13-10-2018 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-917937 COP00_03650 360a89c4857f09d161ba98393c98d687 908 Gene3D G3DSA:3.20.19.10 670 907 3.7E-103 T 13-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 COP00_03650 360a89c4857f09d161ba98393c98d687 908 Gene3D G3DSA:1.10.1440.20 606 667 1.7E-24 T 13-10-2018 COP00_03650 360a89c4857f09d161ba98393c98d687 908 Pfam PF00694 Aconitase C-terminal domain 707 834 2.6E-46 T 13-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 COP00_03650 360a89c4857f09d161ba98393c98d687 908 ProSitePatterns PS00450 Aconitase family signature 1. 442 458 - T 13-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 COP00_03650 360a89c4857f09d161ba98393c98d687 908 Pfam PF00330 Aconitase family (aconitate hydratase) 85 577 7.0E-175 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 COP00_03650 360a89c4857f09d161ba98393c98d687 908 Gene3D G3DSA:3.30.499.20 12 380 7.6E-160 T 13-10-2018 COP00_03650 360a89c4857f09d161ba98393c98d687 908 ProSitePatterns PS01244 Aconitase family signature 2. 508 521 - T 13-10-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 COP00_03650 360a89c4857f09d161ba98393c98d687 908 PRINTS PR00415 Aconitase family signature 508 521 1.3E-41 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 COP00_03650 360a89c4857f09d161ba98393c98d687 908 PRINTS PR00415 Aconitase family signature 224 239 1.3E-41 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 COP00_03650 360a89c4857f09d161ba98393c98d687 908 PRINTS PR00415 Aconitase family signature 153 166 1.3E-41 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 COP00_03650 360a89c4857f09d161ba98393c98d687 908 PRINTS PR00415 Aconitase family signature 286 299 1.3E-41 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 COP00_03650 360a89c4857f09d161ba98393c98d687 908 PRINTS PR00415 Aconitase family signature 380 394 1.3E-41 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 COP00_03650 360a89c4857f09d161ba98393c98d687 908 PRINTS PR00415 Aconitase family signature 446 457 1.3E-41 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 COP00_03650 360a89c4857f09d161ba98393c98d687 908 PRINTS PR00415 Aconitase family signature 177 185 1.3E-41 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 COP00_03650 360a89c4857f09d161ba98393c98d687 908 PRINTS PR00415 Aconitase family signature 300 313 1.3E-41 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 COP00_03650 360a89c4857f09d161ba98393c98d687 908 PRINTS PR00415 Aconitase family signature 210 223 1.3E-41 T 13-10-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain KEGG: 00290+4.2.1.33 COP00_03650 360a89c4857f09d161ba98393c98d687 908 SUPERFAMILY SSF53732 11 642 4.05E-225 T 13-10-2018 IPR036008 Aconitase, iron-sulfur domain KEGG: 00290+4.2.1.33 COP00_03650 360a89c4857f09d161ba98393c98d687 908 SUPERFAMILY SSF52016 646 905 6.87E-87 T 13-10-2018 COP00_07315 e6468347e19ed7b70c99f9bb4bc85685 610 SUPERFAMILY SSF100920 354 510 1.96E-63 T 13-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 COP00_07315 e6468347e19ed7b70c99f9bb4bc85685 610 Gene3D G3DSA:3.30.420.40 5 347 1.1E-151 T 13-10-2018 COP00_07315 e6468347e19ed7b70c99f9bb4bc85685 610 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 13-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 COP00_07315 e6468347e19ed7b70c99f9bb4bc85685 610 SUPERFAMILY SSF100934 477 580 3.79E-13 T 13-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 COP00_07315 e6468347e19ed7b70c99f9bb4bc85685 610 Gene3D G3DSA:1.20.1270.10 477 580 4.4E-24 T 13-10-2018 IPR029048 Heat shock protein 70kD, C-terminal domain superfamily Reactome: R-HSA-3371453 COP00_07315 e6468347e19ed7b70c99f9bb4bc85685 610 Gene3D G3DSA:3.90.640.10 198 279 1.1E-151 T 13-10-2018 COP00_07315 e6468347e19ed7b70c99f9bb4bc85685 610 SUPERFAMILY SSF53067 160 351 7.41E-68 T 13-10-2018 COP00_07315 e6468347e19ed7b70c99f9bb4bc85685 610 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 573 1.3E-286 T 13-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 COP00_07315 e6468347e19ed7b70c99f9bb4bc85685 610 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 166 179 - T 13-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 COP00_07315 e6468347e19ed7b70c99f9bb4bc85685 610 Gene3D G3DSA:2.60.34.10 348 476 1.0E-59 T 13-10-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain superfamily Reactome: R-HSA-3371453 COP00_07315 e6468347e19ed7b70c99f9bb4bc85685 610 PRINTS PR00301 70kDa heat shock protein signature 172 182 3.1E-77 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 COP00_07315 e6468347e19ed7b70c99f9bb4bc85685 610 PRINTS PR00301 70kDa heat shock protein signature 439 455 3.1E-77 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 COP00_07315 e6468347e19ed7b70c99f9bb4bc85685 610 PRINTS PR00301 70kDa heat shock protein signature 3 16 3.1E-77 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 COP00_07315 e6468347e19ed7b70c99f9bb4bc85685 610 PRINTS PR00301 70kDa heat shock protein signature 358 377 3.1E-77 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 COP00_07315 e6468347e19ed7b70c99f9bb4bc85685 610 PRINTS PR00301 70kDa heat shock protein signature 53 61 3.1E-77 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 COP00_07315 e6468347e19ed7b70c99f9bb4bc85685 610 PRINTS PR00301 70kDa heat shock protein signature 304 320 3.1E-77 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 COP00_07315 e6468347e19ed7b70c99f9bb4bc85685 610 PRINTS PR00301 70kDa heat shock protein signature 335 355 3.1E-77 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 COP00_07315 e6468347e19ed7b70c99f9bb4bc85685 610 PRINTS PR00301 70kDa heat shock protein signature 112 132 3.1E-77 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 COP00_07315 e6468347e19ed7b70c99f9bb4bc85685 610 PRINTS PR00301 70kDa heat shock protein signature 31 43 3.1E-77 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 COP00_07315 e6468347e19ed7b70c99f9bb4bc85685 610 SUPERFAMILY SSF53067 1 157 1.73E-57 T 13-10-2018 COP00_07315 e6468347e19ed7b70c99f9bb4bc85685 610 Pfam PF00012 Hsp70 protein 77 573 1.0E-223 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 COP00_07315 e6468347e19ed7b70c99f9bb4bc85685 610 Pfam PF00012 Hsp70 protein 4 76 5.9E-29 T 13-10-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 COP00_07315 e6468347e19ed7b70c99f9bb4bc85685 610 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 603 37.219 T 13-10-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613|Reactome: R-HSA-8950505 COP00_07315 e6468347e19ed7b70c99f9bb4bc85685 610 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 307 321 - T 13-10-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 COP00_07315 e6468347e19ed7b70c99f9bb4bc85685 610 Gene3D G3DSA:3.30.420.40 159 337 1.1E-151 T 13-10-2018 COP00_01465 0f21ae2ebe688ec15f7368ed7241ed55 352 SUPERFAMILY SSF52738 165 351 1.7E-60 T 13-10-2018 IPR035909 Methylesterase CheB, C-terminal COP00_01465 0f21ae2ebe688ec15f7368ed7241ed55 352 Gene3D G3DSA:3.40.50.2300 1 134 1.4E-33 T 13-10-2018 COP00_01465 0f21ae2ebe688ec15f7368ed7241ed55 352 PIRSF PIRSF000876 1 352 4.0E-136 T 13-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 COP00_01465 0f21ae2ebe688ec15f7368ed7241ed55 352 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 2 352 38.818 T 13-10-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 COP00_01465 0f21ae2ebe688ec15f7368ed7241ed55 352 SMART SM00448 2 125 3.3E-25 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 COP00_01465 0f21ae2ebe688ec15f7368ed7241ed55 352 Gene3D G3DSA:3.40.50.180 160 350 1.8E-67 T 13-10-2018 IPR035909 Methylesterase CheB, C-terminal COP00_01465 0f21ae2ebe688ec15f7368ed7241ed55 352 Pfam PF01339 CheB methylesterase 167 347 2.0E-56 T 13-10-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 COP00_01465 0f21ae2ebe688ec15f7368ed7241ed55 352 SUPERFAMILY SSF52172 1 106 1.21E-29 T 13-10-2018 IPR011006 CheY-like superfamily COP00_01465 0f21ae2ebe688ec15f7368ed7241ed55 352 Pfam PF00072 Response regulator receiver domain 4 107 7.2E-25 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 COP00_16420 3c86f246716c2c99ef96568c79164dc3 120 Gene3D G3DSA:3.30.1130.10 1 120 5.7E-47 T 13-10-2018 COP00_16420 3c86f246716c2c99ef96568c79164dc3 120 Pfam PF02152 Dihydroneopterin aldolase 4 116 1.2E-35 T 13-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 COP00_16420 3c86f246716c2c99ef96568c79164dc3 120 SMART SM00905 4 117 9.2E-53 T 13-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 COP00_16420 3c86f246716c2c99ef96568c79164dc3 120 SUPERFAMILY SSF55620 2 119 2.67E-40 T 13-10-2018 COP00_16420 3c86f246716c2c99ef96568c79164dc3 120 TIGRFAM TIGR00526 folB_dom: FolB domain 2 119 3.7E-38 T 13-10-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 COP00_16420 3c86f246716c2c99ef96568c79164dc3 120 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 2 117 1.3E-44 T 13-10-2018 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 COP00_09430 fb0c8b0615984c86b514a134e9fde4a2 571 PIRSF PIRSF000106 2 571 3.6E-226 T 13-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 COP00_09430 fb0c8b0615984c86b514a134e9fde4a2 571 Pfam PF00390 Malic enzyme, N-terminal domain 87 269 3.5E-71 T 13-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 COP00_09430 fb0c8b0615984c86b514a134e9fde4a2 571 SUPERFAMILY SSF51735 279 569 4.66E-97 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily COP00_09430 fb0c8b0615984c86b514a134e9fde4a2 571 ProSitePatterns PS00331 Malic enzymes signature. 275 291 - T 13-10-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 COP00_09430 fb0c8b0615984c86b514a134e9fde4a2 571 Gene3D G3DSA:3.40.50.10380 21 276 9.3E-105 T 13-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 COP00_09430 fb0c8b0615984c86b514a134e9fde4a2 571 SMART SM01274 87 269 4.1E-92 T 13-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 COP00_09430 fb0c8b0615984c86b514a134e9fde4a2 571 PRINTS PR00072 Malic enzyme signature 275 291 2.2E-69 T 13-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 COP00_09430 fb0c8b0615984c86b514a134e9fde4a2 571 PRINTS PR00072 Malic enzyme signature 250 268 2.2E-69 T 13-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 COP00_09430 fb0c8b0615984c86b514a134e9fde4a2 571 PRINTS PR00072 Malic enzyme signature 93 117 2.2E-69 T 13-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 COP00_09430 fb0c8b0615984c86b514a134e9fde4a2 571 PRINTS PR00072 Malic enzyme signature 418 434 2.2E-69 T 13-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 COP00_09430 fb0c8b0615984c86b514a134e9fde4a2 571 PRINTS PR00072 Malic enzyme signature 155 184 2.2E-69 T 13-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 COP00_09430 fb0c8b0615984c86b514a134e9fde4a2 571 PRINTS PR00072 Malic enzyme signature 306 322 2.2E-69 T 13-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 COP00_09430 fb0c8b0615984c86b514a134e9fde4a2 571 PRINTS PR00072 Malic enzyme signature 191 213 2.2E-69 T 13-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 COP00_09430 fb0c8b0615984c86b514a134e9fde4a2 571 Pfam PF03949 Malic enzyme, NAD binding domain 279 539 3.4E-107 T 13-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 COP00_09430 fb0c8b0615984c86b514a134e9fde4a2 571 SUPERFAMILY SSF53223 9 278 1.15E-102 T 13-10-2018 COP00_09430 fb0c8b0615984c86b514a134e9fde4a2 571 Gene3D G3DSA:3.40.50.720 277 570 1.8E-112 T 13-10-2018 COP00_09430 fb0c8b0615984c86b514a134e9fde4a2 571 SMART SM00919 279 540 1.3E-130 T 13-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 COP00_22960 0955f2de4e5195b6c2a675acb3c1ebb5 233 SUPERFAMILY SSF48613 2 220 5.34E-69 T 13-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 COP00_22960 0955f2de4e5195b6c2a675acb3c1ebb5 233 TIGRFAM TIGR04306 salvage_TenA: thiaminase II 11 214 1.1E-81 T 13-10-2018 IPR027574 Thiaminase II GO:0006772|GO:0050334 KEGG: 00730+3.5.99.2|MetaCyc: PWY-6899|MetaCyc: PWY-7356 COP00_22960 0955f2de4e5195b6c2a675acb3c1ebb5 233 Gene3D G3DSA:1.20.910.10 1 220 1.6E-62 T 13-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 COP00_22960 0955f2de4e5195b6c2a675acb3c1ebb5 233 Pfam PF03070 TENA/THI-4/PQQC family 9 213 1.5E-56 T 13-10-2018 IPR004305 Thiaminase-2/PQQC COP00_15960 d9c99b042138a777445279db87084453 642 PRINTS PR00418 DNA topoisomerase II family signature 119 133 2.0E-72 T 13-10-2018 COP00_15960 d9c99b042138a777445279db87084453 642 PRINTS PR00418 DNA topoisomerase II family signature 428 442 2.0E-72 T 13-10-2018 COP00_15960 d9c99b042138a777445279db87084453 642 PRINTS PR00418 DNA topoisomerase II family signature 574 590 2.0E-72 T 13-10-2018 COP00_15960 d9c99b042138a777445279db87084453 642 PRINTS PR00418 DNA topoisomerase II family signature 276 289 2.0E-72 T 13-10-2018 COP00_15960 d9c99b042138a777445279db87084453 642 PRINTS PR00418 DNA topoisomerase II family signature 494 510 2.0E-72 T 13-10-2018 COP00_15960 d9c99b042138a777445279db87084453 642 PRINTS PR00418 DNA topoisomerase II family signature 512 529 2.0E-72 T 13-10-2018 COP00_15960 d9c99b042138a777445279db87084453 642 PRINTS PR00418 DNA topoisomerase II family signature 532 544 2.0E-72 T 13-10-2018 COP00_15960 d9c99b042138a777445279db87084453 642 PRINTS PR00418 DNA topoisomerase II family signature 41 56 2.0E-72 T 13-10-2018 COP00_15960 d9c99b042138a777445279db87084453 642 PRINTS PR00418 DNA topoisomerase II family signature 76 89 2.0E-72 T 13-10-2018 COP00_15960 d9c99b042138a777445279db87084453 642 SMART SM00387 37 181 1.2E-23 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase COP00_15960 d9c99b042138a777445279db87084453 642 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 9 642 99.35 T 13-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 COP00_15960 d9c99b042138a777445279db87084453 642 PRINTS PR01159 DNA gyrase subunit B signature 368 382 9.0E-79 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 COP00_15960 d9c99b042138a777445279db87084453 642 PRINTS PR01159 DNA gyrase subunit B signature 382 402 9.0E-79 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 COP00_15960 d9c99b042138a777445279db87084453 642 PRINTS PR01159 DNA gyrase subunit B signature 595 607 9.0E-79 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 COP00_15960 d9c99b042138a777445279db87084453 642 PRINTS PR01159 DNA gyrase subunit B signature 320 336 9.0E-79 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 COP00_15960 d9c99b042138a777445279db87084453 642 PRINTS PR01159 DNA gyrase subunit B signature 202 215 9.0E-79 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 COP00_15960 d9c99b042138a777445279db87084453 642 PRINTS PR01159 DNA gyrase subunit B signature 12 22 9.0E-79 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 COP00_15960 d9c99b042138a777445279db87084453 642 PRINTS PR01159 DNA gyrase subunit B signature 478 487 9.0E-79 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 COP00_15960 d9c99b042138a777445279db87084453 642 PRINTS PR01159 DNA gyrase subunit B signature 611 627 9.0E-79 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 COP00_15960 d9c99b042138a777445279db87084453 642 PRINTS PR01159 DNA gyrase subunit B signature 187 202 9.0E-79 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 COP00_15960 d9c99b042138a777445279db87084453 642 PRINTS PR01159 DNA gyrase subunit B signature 228 250 9.0E-79 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 COP00_15960 d9c99b042138a777445279db87084453 642 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 12 642 0.0 T 13-10-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 COP00_15960 d9c99b042138a777445279db87084453 642 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 572 631 3.3E-30 T 13-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 COP00_15960 d9c99b042138a777445279db87084453 642 SMART SM00433 41 635 0.0 T 13-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 COP00_15960 d9c99b042138a777445279db87084453 642 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 40 180 2.7E-21 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase COP00_15960 d9c99b042138a777445279db87084453 642 SUPERFAMILY SSF55874 12 224 8.64E-75 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily COP00_15960 d9c99b042138a777445279db87084453 642 Gene3D G3DSA:3.40.50.670 407 642 2.1E-112 T 13-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 COP00_15960 d9c99b042138a777445279db87084453 642 Pfam PF00204 DNA gyrase B 229 398 1.3E-64 T 13-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 COP00_15960 d9c99b042138a777445279db87084453 642 ProSitePatterns PS00177 DNA topoisomerase II signature. 430 438 - T 13-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 COP00_15960 d9c99b042138a777445279db87084453 642 Gene3D G3DSA:3.30.230.10 228 406 5.2E-75 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup COP00_15960 d9c99b042138a777445279db87084453 642 Pfam PF01751 Toprim domain 427 538 7.5E-19 T 13-10-2018 IPR006171 TOPRIM domain COP00_15960 d9c99b042138a777445279db87084453 642 SUPERFAMILY SSF54211 229 399 1.33E-63 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold COP00_15960 d9c99b042138a777445279db87084453 642 SUPERFAMILY SSF56719 402 633 1.67E-93 T 13-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 COP00_15960 d9c99b042138a777445279db87084453 642 Gene3D G3DSA:3.30.565.10 8 227 1.8E-94 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily COP00_04500 3658a9b1174b7cee237aced5af2a518b 151 SUPERFAMILY SSF55136 8 151 6.02E-16 T 13-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily COP00_04500 3658a9b1174b7cee237aced5af2a518b 151 SMART SM00871 2 150 1.5E-18 T 13-10-2018 IPR010499 Bacterial transcription activator, effector binding COP00_04500 3658a9b1174b7cee237aced5af2a518b 151 Pfam PF14526 Integron-associated effector binding protein 7 149 4.2E-22 T 13-10-2018 IPR029441 Integron-associated effector binding protein COP00_04500 3658a9b1174b7cee237aced5af2a518b 151 Gene3D G3DSA:3.20.80.10 1 150 9.5E-35 T 13-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily COP00_04335 83c633e28d51205078fbd92b407e757d 1519 Pfam PF04898 Glutamate synthase central domain 464 740 1.1E-113 T 13-10-2018 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 COP00_04335 83c633e28d51205078fbd92b407e757d 1519 Gene3D G3DSA:3.60.20.10 22 444 1.9E-183 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal COP00_04335 83c633e28d51205078fbd92b407e757d 1519 SUPERFAMILY SSF56235 22 441 2.06E-156 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal COP00_04335 83c633e28d51205078fbd92b407e757d 1519 Gene3D G3DSA:3.20.20.70 787 1217 1.6E-197 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 COP00_04335 83c633e28d51205078fbd92b407e757d 1519 Gene3D G3DSA:2.160.20.60 1218 1490 4.2E-109 T 13-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 COP00_04335 83c633e28d51205078fbd92b407e757d 1519 Pfam PF01493 GXGXG motif 1245 1432 3.9E-82 T 13-10-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0016491|GO:0055114 COP00_04335 83c633e28d51205078fbd92b407e757d 1519 Pfam PF00310 Glutamine amidotransferases class-II 22 438 1.5E-186 T 13-10-2018 IPR017932 Glutamine amidotransferase type 2 domain COP00_04335 83c633e28d51205078fbd92b407e757d 1519 Gene3D G3DSA:3.20.20.70 445 786 8.2E-132 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 COP00_04335 83c633e28d51205078fbd92b407e757d 1519 SUPERFAMILY SSF51395 457 1204 8.14E-263 T 13-10-2018 COP00_04335 83c633e28d51205078fbd92b407e757d 1519 SUPERFAMILY SSF69336 1214 1480 2.62E-92 T 13-10-2018 IPR036485 Glutamate synthase, alpha subunit, C-terminal domain superfamily GO:0016491|GO:0055114 COP00_04335 83c633e28d51205078fbd92b407e757d 1519 Pfam PF01645 Conserved region in glutamate synthase 799 1167 1.2E-162 T 13-10-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 COP00_19005 08b655e1068e83e99932f5ed5a08a4a8 458 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 4 457 35.089 T 13-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 COP00_19005 08b655e1068e83e99932f5ed5a08a4a8 458 SUPERFAMILY SSF53623 106 312 4.97E-55 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 COP00_19005 08b655e1068e83e99932f5ed5a08a4a8 458 Gene3D G3DSA:3.90.190.20 314 458 1.0E-45 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 COP00_19005 08b655e1068e83e99932f5ed5a08a4a8 458 SUPERFAMILY SSF53244 316 456 2.2E-35 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 COP00_19005 08b655e1068e83e99932f5ed5a08a4a8 458 Pfam PF02875 Mur ligase family, glutamate ligase domain 317 392 5.4E-17 T 13-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 COP00_19005 08b655e1068e83e99932f5ed5a08a4a8 458 Gene3D G3DSA:3.40.1190.10 87 313 1.7E-70 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 COP00_19005 08b655e1068e83e99932f5ed5a08a4a8 458 SUPERFAMILY SSF63418 1 103 1.57E-23 T 13-10-2018 IPR035911 MurE/MurF, N-terminal COP00_19005 08b655e1068e83e99932f5ed5a08a4a8 458 Gene3D G3DSA:3.40.1390.10 2 80 8.6E-20 T 13-10-2018 COP00_19005 08b655e1068e83e99932f5ed5a08a4a8 458 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 32 456 7.5E-141 T 13-10-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 COP00_19005 08b655e1068e83e99932f5ed5a08a4a8 458 Pfam PF08245 Mur ligase middle domain 111 294 1.5E-51 T 13-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 COP00_19005 08b655e1068e83e99932f5ed5a08a4a8 458 Pfam PF01225 Mur ligase family, catalytic domain 27 100 1.9E-11 T 13-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 COP00_12870 a8a5b8dadd095e76124ad372bbfa1c77 426 PRINTS PR00083 Histidinol dehydrogenase signature 224 245 1.2E-89 T 13-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 COP00_12870 a8a5b8dadd095e76124ad372bbfa1c77 426 PRINTS PR00083 Histidinol dehydrogenase signature 130 156 1.2E-89 T 13-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 COP00_12870 a8a5b8dadd095e76124ad372bbfa1c77 426 PRINTS PR00083 Histidinol dehydrogenase signature 246 265 1.2E-89 T 13-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 COP00_12870 a8a5b8dadd095e76124ad372bbfa1c77 426 PRINTS PR00083 Histidinol dehydrogenase signature 165 191 1.2E-89 T 13-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 COP00_12870 a8a5b8dadd095e76124ad372bbfa1c77 426 PRINTS PR00083 Histidinol dehydrogenase signature 356 374 1.2E-89 T 13-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 COP00_12870 a8a5b8dadd095e76124ad372bbfa1c77 426 PRINTS PR00083 Histidinol dehydrogenase signature 29 53 1.2E-89 T 13-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 COP00_12870 a8a5b8dadd095e76124ad372bbfa1c77 426 PRINTS PR00083 Histidinol dehydrogenase signature 315 340 1.2E-89 T 13-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 COP00_12870 a8a5b8dadd095e76124ad372bbfa1c77 426 PRINTS PR00083 Histidinol dehydrogenase signature 195 220 1.2E-89 T 13-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 COP00_12870 a8a5b8dadd095e76124ad372bbfa1c77 426 Gene3D G3DSA:3.40.50.1980 27 226 3.1E-129 T 13-10-2018 COP00_12870 a8a5b8dadd095e76124ad372bbfa1c77 426 Gene3D G3DSA:3.40.50.1980 228 344 3.1E-129 T 13-10-2018 COP00_12870 a8a5b8dadd095e76124ad372bbfa1c77 426 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 4 422 42.772 T 13-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 COP00_12870 a8a5b8dadd095e76124ad372bbfa1c77 426 Pfam PF00815 Histidinol dehydrogenase 22 421 1.1E-173 T 13-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 COP00_12870 a8a5b8dadd095e76124ad372bbfa1c77 426 SUPERFAMILY SSF53720 23 421 5.49E-89 T 13-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 COP00_12870 a8a5b8dadd095e76124ad372bbfa1c77 426 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 224 256 - T 13-10-2018 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23 COP00_12870 a8a5b8dadd095e76124ad372bbfa1c77 426 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 29 421 2.2E-169 T 13-10-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 COP00_12870 a8a5b8dadd095e76124ad372bbfa1c77 426 PIRSF PIRSF000099 2 425 2.0E-172 T 13-10-2018 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 COP00_12755 f6967a8310f47b098384e97faaf35e14 539 Pfam PF01740 STAS domain 433 529 1.8E-17 T 13-10-2018 IPR002645 STAS domain COP00_12755 f6967a8310f47b098384e97faaf35e14 539 SUPERFAMILY SSF52091 435 524 1.96E-18 T 13-10-2018 IPR036513 STAS domain superfamily COP00_12755 f6967a8310f47b098384e97faaf35e14 539 Gene3D G3DSA:3.30.750.24 422 537 4.9E-23 T 13-10-2018 IPR036513 STAS domain superfamily COP00_12755 f6967a8310f47b098384e97faaf35e14 539 Pfam PF00916 Sulfate permease family 16 380 1.4E-96 T 13-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 COP00_05640 efca62ad9f0321f56c2833f25d6844c8 254 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 42 60 - T 13-10-2018 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48 COP00_05640 efca62ad9f0321f56c2833f25d6844c8 254 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 4 249 31.921 T 13-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 COP00_05640 efca62ad9f0321f56c2833f25d6844c8 254 Gene3D G3DSA:3.20.20.70 1 252 2.9E-87 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 COP00_05640 efca62ad9f0321f56c2833f25d6844c8 254 Pfam PF00218 Indole-3-glycerol phosphate synthase 7 247 2.0E-85 T 13-10-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 COP00_05640 efca62ad9f0321f56c2833f25d6844c8 254 SUPERFAMILY SSF51366 24 249 9.54E-77 T 13-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 COP00_12995 e812dc178b4f44eb172814ec8b5a10c3 472 Gene3D G3DSA:3.30.750.44 51 342 1.6E-91 T 13-10-2018 COP00_12995 e812dc178b4f44eb172814ec8b5a10c3 472 Pfam PF13180 PDZ domain 104 180 9.8E-14 T 13-10-2018 IPR001478 PDZ domain GO:0005515 COP00_12995 e812dc178b4f44eb172814ec8b5a10c3 472 Pfam PF01471 Putative peptidoglycan binding domain 390 442 2.3E-10 T 13-10-2018 IPR002477 Peptidoglycan binding-like COP00_12995 e812dc178b4f44eb172814ec8b5a10c3 472 Gene3D G3DSA:1.10.101.10 376 453 1.2E-13 T 13-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 COP00_12995 e812dc178b4f44eb172814ec8b5a10c3 472 Pfam PF03572 Peptidase family S41 205 366 4.0E-49 T 13-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 COP00_12995 e812dc178b4f44eb172814ec8b5a10c3 472 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 55 382 1.1E-127 T 13-10-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 COP00_12995 e812dc178b4f44eb172814ec8b5a10c3 472 SMART SM00228 103 174 9.5E-18 T 13-10-2018 IPR001478 PDZ domain GO:0005515 COP00_12995 e812dc178b4f44eb172814ec8b5a10c3 472 SUPERFAMILY SSF47090 376 447 1.22E-15 T 13-10-2018 IPR036365 PGBD-like superfamily COP00_12995 e812dc178b4f44eb172814ec8b5a10c3 472 Gene3D G3DSA:3.90.226.10 191 364 1.6E-91 T 13-10-2018 COP00_12995 e812dc178b4f44eb172814ec8b5a10c3 472 SUPERFAMILY SSF50156 74 193 3.42E-24 T 13-10-2018 IPR036034 PDZ superfamily GO:0005515 COP00_12995 e812dc178b4f44eb172814ec8b5a10c3 472 Gene3D G3DSA:2.30.42.10 103 190 1.6E-91 T 13-10-2018 COP00_12995 e812dc178b4f44eb172814ec8b5a10c3 472 SMART SM00245 176 367 4.8E-77 T 13-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 COP00_12995 e812dc178b4f44eb172814ec8b5a10c3 472 SUPERFAMILY SSF52096 42 372 6.46E-69 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily COP00_21540 65ce5477a291c74124eb489a8b2482ed 66 Pfam PF00313 'Cold-shock' DNA-binding domain 3 65 2.0E-29 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 COP00_21540 65ce5477a291c74124eb489a8b2482ed 66 Gene3D G3DSA:2.40.50.140 1 66 7.1E-30 T 13-10-2018 COP00_21540 65ce5477a291c74124eb489a8b2482ed 66 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 33 - T 13-10-2018 IPR019844 Cold-shock conserved site COP00_21540 65ce5477a291c74124eb489a8b2482ed 66 SUPERFAMILY SSF50249 1 64 2.57E-24 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold COP00_21540 65ce5477a291c74124eb489a8b2482ed 66 PRINTS PR00050 Cold shock protein signature 24 33 8.4E-19 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 COP00_21540 65ce5477a291c74124eb489a8b2482ed 66 PRINTS PR00050 Cold shock protein signature 39 57 8.4E-19 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 COP00_21540 65ce5477a291c74124eb489a8b2482ed 66 PRINTS PR00050 Cold shock protein signature 4 19 8.4E-19 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 COP00_21540 65ce5477a291c74124eb489a8b2482ed 66 PIRSF PIRSF002599 1 66 5.8E-24 T 13-10-2018 IPR012156 Cold shock, CspA GO:0003676 COP00_21540 65ce5477a291c74124eb489a8b2482ed 66 SMART SM00357 3 66 5.9E-30 T 13-10-2018 IPR011129 Cold shock domain GO:0003676 COP00_06855 f59092f857ae6fdc21c490fab2420bdd 375 SUPERFAMILY SSF53187 80 369 3.64E-50 T 13-10-2018 COP00_06855 f59092f857ae6fdc21c490fab2420bdd 375 Gene3D G3DSA:3.40.630.10 93 360 4.3E-44 T 13-10-2018 COP00_06855 f59092f857ae6fdc21c490fab2420bdd 375 SMART SM00631 84 362 4.2E-21 T 13-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 COP00_06855 f59092f857ae6fdc21c490fab2420bdd 375 Pfam PF00246 Zinc carboxypeptidase 95 303 9.6E-25 T 13-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 COP00_06855 f59092f857ae6fdc21c490fab2420bdd 375 PRINTS PR00765 Carboxypeptidase A metalloprotease (M14) family signature 108 120 4.4E-5 T 13-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 COP00_06855 f59092f857ae6fdc21c490fab2420bdd 375 PRINTS PR00765 Carboxypeptidase A metalloprotease (M14) family signature 129 143 4.4E-5 T 13-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 COP00_06855 f59092f857ae6fdc21c490fab2420bdd 375 PRINTS PR00765 Carboxypeptidase A metalloprotease (M14) family signature 226 234 4.4E-5 T 13-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 COP00_08115 d521455db6b63b572f268c4e543d3b12 94 Pfam PF06949 Protein of unknown function (DUF1292) 13 87 7.2E-18 T 13-10-2018 IPR009711 Uncharacterised protein family UPF0473 COP00_08115 d521455db6b63b572f268c4e543d3b12 94 Hamap MF_01448 UPF0473 protein . 4 89 22.074 T 13-10-2018 IPR009711 Uncharacterised protein family UPF0473 COP00_15750 03bccc762d8e4838db5efa07fb1ace35 430 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 430 211.421 T 13-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 COP00_15750 03bccc762d8e4838db5efa07fb1ace35 430 SMART SM00788 3 422 1.0E-292 T 13-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 COP00_15750 03bccc762d8e4838db5efa07fb1ace35 430 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 131 142 - T 13-10-2018 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 COP00_15750 03bccc762d8e4838db5efa07fb1ace35 430 Gene3D G3DSA:3.40.440.10 5 252 1.8E-104 T 13-10-2018 COP00_15750 03bccc762d8e4838db5efa07fb1ace35 430 SUPERFAMILY SSF52540 1 427 9.67E-175 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_15750 03bccc762d8e4838db5efa07fb1ace35 430 Gene3D G3DSA:3.90.170.10 265 429 2.0E-71 T 13-10-2018 COP00_15750 03bccc762d8e4838db5efa07fb1ace35 430 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 5 427 4.7E-200 T 13-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 COP00_15750 03bccc762d8e4838db5efa07fb1ace35 430 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 10 17 - T 13-10-2018 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 COP00_15750 03bccc762d8e4838db5efa07fb1ace35 430 Gene3D G3DSA:1.10.300.10 100 199 1.8E-104 T 13-10-2018 COP00_15750 03bccc762d8e4838db5efa07fb1ace35 430 Pfam PF00709 Adenylosuccinate synthetase 4 420 1.4E-184 T 13-10-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 COP00_14435 f4c8f7f686e2ec572081a9393b4875d4 227 Pfam PF04172 LrgB-like family 11 223 2.2E-72 T 13-10-2018 IPR007300 CidB/LrgB family COP00_14435 f4c8f7f686e2ec572081a9393b4875d4 227 TIGRFAM TIGR00659 TIGR00659: TIGR00659 family protein 1 225 1.4E-92 T 13-10-2018 IPR005261 Conserved hypothetical protein CHP00659 COP00_09905 c1a843575b89daa7c8ce513c7154fb9b 579 SUPERFAMILY SSF52518 384 567 2.54E-30 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold COP00_09905 c1a843575b89daa7c8ce513c7154fb9b 579 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 418 550 2.2E-8 T 13-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 COP00_09905 c1a843575b89daa7c8ce513c7154fb9b 579 PIRSF PIRSF004983 2 575 2.8E-203 T 13-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 COP00_09905 c1a843575b89daa7c8ce513c7154fb9b 579 Gene3D G3DSA:3.40.50.970 2 173 1.7E-69 T 13-10-2018 COP00_09905 c1a843575b89daa7c8ce513c7154fb9b 579 Gene3D G3DSA:3.40.50.970 378 579 2.7E-71 T 13-10-2018 COP00_09905 c1a843575b89daa7c8ce513c7154fb9b 579 Gene3D G3DSA:3.40.50.1220 197 377 6.3E-54 T 13-10-2018 COP00_09905 c1a843575b89daa7c8ce513c7154fb9b 579 TIGRFAM TIGR00173 menD: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase 10 444 6.7E-159 T 13-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 COP00_09905 c1a843575b89daa7c8ce513c7154fb9b 579 Pfam PF16582 Middle domain of thiamine pyrophosphate 219 401 1.8E-17 T 13-10-2018 IPR032264 Menaquinone biosynthesis protein MenD, middle domain KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 COP00_09905 c1a843575b89daa7c8ce513c7154fb9b 579 SUPERFAMILY SSF52518 13 186 5.15E-35 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold COP00_09905 c1a843575b89daa7c8ce513c7154fb9b 579 Hamap MF_01659 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [menD]. 3 569 37.779 T 13-10-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 COP00_09905 c1a843575b89daa7c8ce513c7154fb9b 579 SUPERFAMILY SSF52467 166 368 9.81E-8 T 13-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily COP00_09905 c1a843575b89daa7c8ce513c7154fb9b 579 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 13 178 8.3E-38 T 13-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 COP00_07010 c9c88ced26c5462f35e5d4b1ae682b00 160 Pfam PF02618 YceG-like family 99 159 1.5E-8 T 13-10-2018 IPR003770 Endolytic murein transglycosylase COP00_07010 c9c88ced26c5462f35e5d4b1ae682b00 160 Gene3D G3DSA:1.10.8.1150 94 160 1.2E-14 T 13-10-2018 COP00_00295 0de5e2b8b82708aaaff9ba64c8c77aad 406 SUPERFAMILY SSF141868 9 258 4.58E-46 T 13-10-2018 IPR035919 EAL domain superfamily COP00_00295 0de5e2b8b82708aaaff9ba64c8c77aad 406 Pfam PF00563 EAL domain 13 236 6.7E-32 T 13-10-2018 IPR001633 EAL domain COP00_00295 0de5e2b8b82708aaaff9ba64c8c77aad 406 Gene3D G3DSA:1.20.5.170 246 290 9.8E-25 T 13-10-2018 COP00_00295 0de5e2b8b82708aaaff9ba64c8c77aad 406 Gene3D G3DSA:3.20.20.450 1 229 4.5E-72 T 13-10-2018 IPR035919 EAL domain superfamily COP00_00295 0de5e2b8b82708aaaff9ba64c8c77aad 406 Gene3D G3DSA:3.30.450.20 291 406 3.8E-48 T 13-10-2018 COP00_00295 0de5e2b8b82708aaaff9ba64c8c77aad 406 SUPERFAMILY SSF103190 263 404 1.49E-44 T 13-10-2018 IPR029151 Periplasmic sensor-like domain superfamily COP00_00295 0de5e2b8b82708aaaff9ba64c8c77aad 406 Pfam PF10388 EAL-domain associated signalling protein domain 240 406 1.0E-81 T 13-10-2018 IPR018842 YkuI, C-terminal COP00_00295 0de5e2b8b82708aaaff9ba64c8c77aad 406 SMART SM00052 1 241 3.3E-37 T 13-10-2018 IPR001633 EAL domain COP00_23660 4a3cd697ab79ad9613561022c40dccba 225 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 33 47 3.0E-6 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 COP00_23660 4a3cd697ab79ad9613561022c40dccba 225 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 47 63 3.0E-6 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 COP00_23660 4a3cd697ab79ad9613561022c40dccba 225 SMART SM00895 83 207 1.3E-14 T 13-10-2018 IPR011711 GntR, C-terminal COP00_23660 4a3cd697ab79ad9613561022c40dccba 225 SUPERFAMILY SSF48008 81 207 9.15E-20 T 13-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal COP00_23660 4a3cd697ab79ad9613561022c40dccba 225 SUPERFAMILY SSF46785 10 77 1.14E-17 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_23660 4a3cd697ab79ad9613561022c40dccba 225 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 73 5.0E-17 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 COP00_23660 4a3cd697ab79ad9613561022c40dccba 225 SMART SM00345 15 73 1.2E-16 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 COP00_23660 4a3cd697ab79ad9613561022c40dccba 225 Gene3D G3DSA:1.20.120.530 78 211 5.7E-21 T 13-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal COP00_23660 4a3cd697ab79ad9613561022c40dccba 225 Pfam PF07729 FCD domain 87 206 3.0E-22 T 13-10-2018 IPR011711 GntR, C-terminal COP00_23660 4a3cd697ab79ad9613561022c40dccba 225 Gene3D G3DSA:1.10.10.10 8 74 9.0E-22 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_22940 9784a8fcc864e6dc66fbbc3002b4c392 266 SUPERFAMILY SSF111331 20 261 1.57E-62 T 13-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily COP00_22940 9784a8fcc864e6dc66fbbc3002b4c392 266 Gene3D G3DSA:3.40.50.10330 16 262 1.5E-96 T 13-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 COP00_22940 9784a8fcc864e6dc66fbbc3002b4c392 266 Hamap MF_00361 NAD kinase [nadK]. 1 263 23.454 T 13-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 COP00_22940 9784a8fcc864e6dc66fbbc3002b4c392 266 Gene3D G3DSA:2.60.200.30 102 240 1.5E-96 T 13-10-2018 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal GO:0003951|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 COP00_22940 9784a8fcc864e6dc66fbbc3002b4c392 266 Pfam PF01513 ATP-NAD kinase 25 187 3.7E-24 T 13-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 COP00_24380 7356426fc57e93935b244fcd065a2b20 323 Pfam PF00268 Ribonucleotide reductase, small chain 7 283 9.7E-80 T 13-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 COP00_24380 7356426fc57e93935b244fcd065a2b20 323 SUPERFAMILY SSF47240 4 321 3.81E-89 T 13-10-2018 IPR009078 Ferritin-like superfamily COP00_24380 7356426fc57e93935b244fcd065a2b20 323 ProSitePatterns PS00368 Ribonucleotide reductase small subunit signature. 95 112 - T 13-10-2018 IPR030475 Ribonucleotide reductase small subunit, acitve site KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 COP00_24380 7356426fc57e93935b244fcd065a2b20 323 Gene3D G3DSA:1.10.620.20 2 292 9.9E-108 T 13-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 COP00_24380 7356426fc57e93935b244fcd065a2b20 323 TIGRFAM TIGR04171 RNR_1b_NrdF: ribonucleoside-diphosphate reductase, class 1b, beta subunit 4 321 4.6E-142 T 13-10-2018 IPR026494 Ribonucleoside reductase subunit beta, NrdF GO:0005971|GO:0009263 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 COP00_24380 7356426fc57e93935b244fcd065a2b20 323 PIRSF PIRSF000355 2 318 1.1E-89 T 13-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 COP00_09055 e4080b72e323e9e8abbfd985ed98a290 201 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 2 199 29.769 T 13-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 COP00_09055 e4080b72e323e9e8abbfd985ed98a290 201 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 4 191 6.1E-64 T 13-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 COP00_09055 e4080b72e323e9e8abbfd985ed98a290 201 Pfam PF01121 Dephospho-CoA kinase 3 184 7.5E-64 T 13-10-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 COP00_09055 e4080b72e323e9e8abbfd985ed98a290 201 SUPERFAMILY SSF52540 1 194 1.31E-45 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_09055 e4080b72e323e9e8abbfd985ed98a290 201 Gene3D G3DSA:3.40.50.300 1 201 2.4E-78 T 13-10-2018 COP00_16385 b82b3c4f9cd7509694867565edf4264a 289 Pfam PF01430 Hsp33 protein 2 278 3.4E-90 T 13-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 COP00_16385 b82b3c4f9cd7509694867565edf4264a 289 Hamap MF_00117 33 kDa chaperonin [hslO]. 1 289 40.956 T 13-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 COP00_16385 b82b3c4f9cd7509694867565edf4264a 289 PIRSF PIRSF005261 1 289 4.2E-77 T 13-10-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 COP00_16385 b82b3c4f9cd7509694867565edf4264a 289 SUPERFAMILY SSF118352 230 288 1.57E-21 T 13-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 COP00_16385 b82b3c4f9cd7509694867565edf4264a 289 Gene3D G3DSA:3.90.1280.10 235 289 2.0E-23 T 13-10-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 COP00_16385 b82b3c4f9cd7509694867565edf4264a 289 SUPERFAMILY SSF64397 1 239 1.19E-78 T 13-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 COP00_16385 b82b3c4f9cd7509694867565edf4264a 289 Gene3D G3DSA:3.55.30.10 1 234 2.0E-99 T 13-10-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 COP00_18315 f691ec7bc5f73d962eea5f4eb23da5b3 287 Pfam PF06445 GyrI-like small molecule binding domain 128 284 5.5E-28 T 13-10-2018 IPR029442 GyrI-like small molecule binding domain COP00_18315 f691ec7bc5f73d962eea5f4eb23da5b3 287 SUPERFAMILY SSF46689 5 55 5.38E-8 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 COP00_18315 f691ec7bc5f73d962eea5f4eb23da5b3 287 Gene3D G3DSA:1.10.10.60 3 57 1.6E-16 T 13-10-2018 COP00_18315 f691ec7bc5f73d962eea5f4eb23da5b3 287 SMART SM00871 128 285 7.2E-33 T 13-10-2018 IPR010499 Bacterial transcription activator, effector binding COP00_18315 f691ec7bc5f73d962eea5f4eb23da5b3 287 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 73 88 1.3E-5 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 COP00_18315 f691ec7bc5f73d962eea5f4eb23da5b3 287 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 88 104 1.3E-5 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 COP00_18315 f691ec7bc5f73d962eea5f4eb23da5b3 287 Gene3D G3DSA:3.20.80.10 128 287 5.4E-45 T 13-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily COP00_18315 f691ec7bc5f73d962eea5f4eb23da5b3 287 SMART SM00342 21 104 5.3E-25 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 COP00_18315 f691ec7bc5f73d962eea5f4eb23da5b3 287 Pfam PF12833 Helix-turn-helix domain 28 105 3.0E-19 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 COP00_18315 f691ec7bc5f73d962eea5f4eb23da5b3 287 SUPERFAMILY SSF46689 57 114 4.35E-12 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 COP00_18315 f691ec7bc5f73d962eea5f4eb23da5b3 287 Gene3D G3DSA:1.10.10.60 58 114 1.5E-14 T 13-10-2018 COP00_18315 f691ec7bc5f73d962eea5f4eb23da5b3 287 SUPERFAMILY SSF55136 128 287 1.41E-28 T 13-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily COP00_18315 f691ec7bc5f73d962eea5f4eb23da5b3 287 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 58 100 - T 13-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 COP00_05495 0cd60ccabe04cf6155ff4e2ac19bb3a8 394 Gene3D G3DSA:3.40.640.10 62 284 1.9E-143 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 COP00_05495 0cd60ccabe04cf6155ff4e2ac19bb3a8 394 Pfam PF00155 Aminotransferase class I and II 31 385 1.2E-79 T 13-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 COP00_05495 0cd60ccabe04cf6155ff4e2ac19bb3a8 394 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 234 247 - T 13-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 COP00_05495 0cd60ccabe04cf6155ff4e2ac19bb3a8 394 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 114 135 1.2E-16 T 13-10-2018 COP00_05495 0cd60ccabe04cf6155ff4e2ac19bb3a8 394 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 197 220 1.2E-16 T 13-10-2018 COP00_05495 0cd60ccabe04cf6155ff4e2ac19bb3a8 394 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 228 252 1.2E-16 T 13-10-2018 COP00_05495 0cd60ccabe04cf6155ff4e2ac19bb3a8 394 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 161 185 1.2E-16 T 13-10-2018 COP00_05495 0cd60ccabe04cf6155ff4e2ac19bb3a8 394 PRINTS PR00753 1-aminocyclopropane-1-carboxylate synthase signature 92 112 1.2E-16 T 13-10-2018 COP00_05495 0cd60ccabe04cf6155ff4e2ac19bb3a8 394 Gene3D G3DSA:3.90.1150.10 25 385 1.9E-143 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 COP00_05495 0cd60ccabe04cf6155ff4e2ac19bb3a8 394 SUPERFAMILY SSF53383 3 389 4.12E-119 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase COP00_02895 ffdf41ee9a7ea1815a2bd411f04e35c6 340 SUPERFAMILY SSF56731 153 277 1.07E-12 T 13-10-2018 COP00_02895 ffdf41ee9a7ea1815a2bd411f04e35c6 340 SUPERFAMILY SSF57783 19 94 5.1E-7 T 13-10-2018 COP00_02895 ffdf41ee9a7ea1815a2bd411f04e35c6 340 Gene3D G3DSA:3.90.580.10 11 98 8.3E-6 T 13-10-2018 IPR036977 DNA Primase, CHC2-type zinc finger GO:0003677|GO:0006260|GO:0008270 COP00_02895 ffdf41ee9a7ea1815a2bd411f04e35c6 340 Gene3D G3DSA:3.40.1360.10 208 317 3.5E-7 T 13-10-2018 COP00_14950 765caf1e9e184dfb0b11602af9a59492 304 Gene3D G3DSA:3.40.50.300 2 235 9.3E-62 T 13-10-2018 COP00_14950 765caf1e9e184dfb0b11602af9a59492 304 SMART SM00382 30 213 2.7E-12 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_14950 765caf1e9e184dfb0b11602af9a59492 304 Pfam PF00005 ABC transporter 23 161 1.2E-31 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 COP00_14950 765caf1e9e184dfb0b11602af9a59492 304 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 COP00_14950 765caf1e9e184dfb0b11602af9a59492 304 SUPERFAMILY SSF52540 5 226 4.36E-60 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_08995 c871e88ae13df8b0cee368027964bc9f 591 Gene3D G3DSA:3.30.450.40 227 365 2.0E-5 T 13-10-2018 IPR029016 GAF-like domain superfamily COP00_08995 c871e88ae13df8b0cee368027964bc9f 591 SUPERFAMILY SSF55874 433 577 2.62E-14 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily COP00_08995 c871e88ae13df8b0cee368027964bc9f 591 Gene3D G3DSA:3.30.565.10 435 587 3.2E-16 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily COP00_08995 c871e88ae13df8b0cee368027964bc9f 591 Pfam PF06580 Histidine kinase 378 455 2.0E-23 T 13-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 COP00_08995 c871e88ae13df8b0cee368027964bc9f 591 Pfam PF13492 GAF domain 252 364 3.6E-6 T 13-10-2018 IPR003018 GAF domain GO:0005515 COP00_08995 c871e88ae13df8b0cee368027964bc9f 591 Pfam PF07694 5TMR of 5TMR-LYT 26 207 4.5E-55 T 13-10-2018 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region GO:0000155|GO:0000160|GO:0004673|GO:0016021|GO:0071555 COP00_08995 c871e88ae13df8b0cee368027964bc9f 591 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 476 579 1.3E-10 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase COP00_08995 c871e88ae13df8b0cee368027964bc9f 591 SUPERFAMILY SSF55781 245 364 2.5E-8 T 13-10-2018 COP00_08995 c871e88ae13df8b0cee368027964bc9f 591 Gene3D G3DSA:1.10.1760.20 66 216 4.8E-5 T 13-10-2018 COP00_08995 c871e88ae13df8b0cee368027964bc9f 591 SMART SM00387 471 580 3.7E-5 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase COP00_08995 c871e88ae13df8b0cee368027964bc9f 591 SMART SM00065 238 373 5.0E-9 T 13-10-2018 IPR003018 GAF domain GO:0005515 COP00_16655 44600e9cc2ea6ef8d8b83312b8966446 138 Pfam PF00164 Ribosomal protein S12/S23 36 136 4.5E-38 T 13-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 COP00_16655 44600e9cc2ea6ef8d8b83312b8966446 138 PRINTS PR01034 Ribosomal protein S12 signature 40 55 1.7E-59 T 13-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 COP00_16655 44600e9cc2ea6ef8d8b83312b8966446 138 PRINTS PR01034 Ribosomal protein S12 signature 71 90 1.7E-59 T 13-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 COP00_16655 44600e9cc2ea6ef8d8b83312b8966446 138 PRINTS PR01034 Ribosomal protein S12 signature 90 107 1.7E-59 T 13-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 COP00_16655 44600e9cc2ea6ef8d8b83312b8966446 138 PRINTS PR01034 Ribosomal protein S12 signature 107 123 1.7E-59 T 13-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 COP00_16655 44600e9cc2ea6ef8d8b83312b8966446 138 PRINTS PR01034 Ribosomal protein S12 signature 55 70 1.7E-59 T 13-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 COP00_16655 44600e9cc2ea6ef8d8b83312b8966446 138 PRINTS PR01034 Ribosomal protein S12 signature 123 135 1.7E-59 T 13-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 COP00_16655 44600e9cc2ea6ef8d8b83312b8966446 138 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 136 40.733 T 13-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_16655 44600e9cc2ea6ef8d8b83312b8966446 138 Gene3D G3DSA:2.40.50.140 1 138 2.5E-62 T 13-10-2018 COP00_16655 44600e9cc2ea6ef8d8b83312b8966446 138 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 137 8.8E-69 T 13-10-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_16655 44600e9cc2ea6ef8d8b83312b8966446 138 SUPERFAMILY SSF50249 2 137 4.2E-49 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold COP00_16655 44600e9cc2ea6ef8d8b83312b8966446 138 PIRSF PIRSF002133 1 137 2.3E-50 T 13-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 COP00_16655 44600e9cc2ea6ef8d8b83312b8966446 138 ProSitePatterns PS00055 Ribosomal protein S12 signature. 56 63 - T 13-10-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 COP00_16225 5302d36cf8ee1f5c383a761c88206352 186 Pfam PF13662 Toprim domain 4 72 4.6E-8 T 13-10-2018 IPR006171 TOPRIM domain COP00_16225 5302d36cf8ee1f5c383a761c88206352 186 SMART SM00493 4 77 5.9E-10 T 13-10-2018 IPR006171 TOPRIM domain COP00_16225 5302d36cf8ee1f5c383a761c88206352 186 Pfam PF13331 Domain of unknown function (DUF4093) 93 176 5.4E-27 T 13-10-2018 IPR025156 Ribonuclease M5, C-terminal domain COP00_16225 5302d36cf8ee1f5c383a761c88206352 186 TIGRFAM TIGR00334 5S_RNA_mat_M5: ribonuclease M5 2 177 8.9E-71 T 13-10-2018 IPR004466 Ribonuclease M5 GO:0043822 COP00_16225 5302d36cf8ee1f5c383a761c88206352 186 Hamap MF_01469 Ribonuclease M5 [rnmV]. 3 178 31.881 T 13-10-2018 IPR004466 Ribonuclease M5 GO:0043822 COP00_16225 5302d36cf8ee1f5c383a761c88206352 186 SUPERFAMILY SSF110455 1 114 9.42E-35 T 13-10-2018 COP00_16225 5302d36cf8ee1f5c383a761c88206352 186 Gene3D G3DSA:3.40.1360.20 1 115 3.3E-25 T 13-10-2018 COP00_18680 803477274bd5eae8eeb4843ce17fc2a4 719 SUPERFAMILY SSF50692 550 709 4.07E-37 T 13-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily COP00_18680 803477274bd5eae8eeb4843ce17fc2a4 719 SUPERFAMILY SSF53706 19 581 1.31E-172 T 13-10-2018 COP00_18680 803477274bd5eae8eeb4843ce17fc2a4 719 PIRSF PIRSF000144 63 616 1.4E-40 T 13-10-2018 COP00_18680 803477274bd5eae8eeb4843ce17fc2a4 719 Pfam PF00384 Molybdopterin oxidoreductase 78 503 7.8E-93 T 13-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 COP00_18680 803477274bd5eae8eeb4843ce17fc2a4 719 SMART SM00926 19 75 1.2E-6 T 13-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 COP00_18680 803477274bd5eae8eeb4843ce17fc2a4 719 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 19 73 5.8E-11 T 13-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 COP00_18680 803477274bd5eae8eeb4843ce17fc2a4 719 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 449 466 - T 13-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 COP00_18680 803477274bd5eae8eeb4843ce17fc2a4 719 Gene3D G3DSA:2.20.25.90 20 74 2.9E-7 T 13-10-2018 COP00_18680 803477274bd5eae8eeb4843ce17fc2a4 719 Gene3D G3DSA:3.40.228.10 156 355 1.4E-162 T 13-10-2018 COP00_18680 803477274bd5eae8eeb4843ce17fc2a4 719 Gene3D G3DSA:3.40.50.740 83 552 1.4E-162 T 13-10-2018 COP00_18680 803477274bd5eae8eeb4843ce17fc2a4 719 Pfam PF01568 Molydopterin dinucleotide binding domain 597 704 1.9E-29 T 13-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 COP00_18680 803477274bd5eae8eeb4843ce17fc2a4 719 Gene3D G3DSA:2.40.40.20 594 710 1.1E-37 T 13-10-2018 COP00_17320 2a83aa4ea9419fb3423b3a3a45982700 311 Pfam PF00877 NlpC/P60 family 202 306 2.1E-35 T 13-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain COP00_17320 2a83aa4ea9419fb3423b3a3a45982700 311 Pfam PF13702 Lysozyme-like 35 173 1.1E-42 T 13-10-2018 COP00_17320 2a83aa4ea9419fb3423b3a3a45982700 311 SUPERFAMILY SSF54001 191 309 1.01E-41 T 13-10-2018 IPR038765 Papain-like cysteine peptidase superfamily COP00_17320 2a83aa4ea9419fb3423b3a3a45982700 311 Gene3D G3DSA:3.90.1720.10 184 310 1.1E-47 T 13-10-2018 COP00_17320 2a83aa4ea9419fb3423b3a3a45982700 311 Gene3D G3DSA:1.10.530.10 33 175 1.6E-48 T 13-10-2018 COP00_17320 2a83aa4ea9419fb3423b3a3a45982700 311 SUPERFAMILY SSF53955 41 174 5.62E-13 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily COP00_13780 10fb93f75bbaae982e80e97123546ad5 435 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 417 45.408 T 13-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 COP00_13780 10fb93f75bbaae982e80e97123546ad5 435 SUPERFAMILY SSF55205 2 418 5.89E-142 T 13-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 COP00_13780 10fb93f75bbaae982e80e97123546ad5 435 Gene3D G3DSA:3.65.10.10 6 415 1.6E-173 T 13-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 COP00_13780 10fb93f75bbaae982e80e97123546ad5 435 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 407 1.2E-119 T 13-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 COP00_13780 10fb93f75bbaae982e80e97123546ad5 435 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2 416 2.7E-180 T 13-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 COP00_13780 10fb93f75bbaae982e80e97123546ad5 435 Gene3D G3DSA:3.65.10.10 20 231 1.6E-173 T 13-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 COP00_05445 fca60731c4f5c63aa991cbe8742fee2b 123 Pfam PF08807 Bacterial domain of unknown function (DUF1798) 10 117 6.4E-38 T 13-10-2018 IPR014913 Protein of unknown function DUF1798 COP00_05445 fca60731c4f5c63aa991cbe8742fee2b 123 SUPERFAMILY SSF140415 2 121 9.55E-41 T 13-10-2018 IPR023351 YppE-like superfamily COP00_05445 fca60731c4f5c63aa991cbe8742fee2b 123 Gene3D G3DSA:1.20.120.440 2 122 6.0E-41 T 13-10-2018 IPR023351 YppE-like superfamily COP00_04200 eb9d861b76c0fd15c23b61de2a047f67 647 ProSitePatterns PS00455 Putative AMP-binding domain signature. 266 277 - T 13-10-2018 IPR020845 AMP-binding, conserved site COP00_04200 eb9d861b76c0fd15c23b61de2a047f67 647 Gene3D G3DSA:3.40.50.12780 60 518 2.9E-90 T 13-10-2018 COP00_04200 eb9d861b76c0fd15c23b61de2a047f67 647 Pfam PF00501 AMP-binding enzyme 96 524 2.2E-74 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 COP00_04200 eb9d861b76c0fd15c23b61de2a047f67 647 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 31 87 1.7E-11 T 13-10-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00630+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5108|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 COP00_04200 eb9d861b76c0fd15c23b61de2a047f67 647 Pfam PF13193 AMP-binding enzyme C-terminal domain 533 611 1.4E-22 T 13-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain COP00_04200 eb9d861b76c0fd15c23b61de2a047f67 647 Gene3D G3DSA:3.30.300.30 520 645 1.4E-25 T 13-10-2018 COP00_04200 eb9d861b76c0fd15c23b61de2a047f67 647 SUPERFAMILY SSF56801 19 640 1.96E-154 T 13-10-2018 COP00_18600 44bca24f80fc95e49ed86f75181ef5da 313 SUPERFAMILY SSF53807 37 298 3.34E-68 T 13-10-2018 COP00_18600 44bca24f80fc95e49ed86f75181ef5da 313 Gene3D G3DSA:3.40.50.12250 37 294 6.9E-102 T 13-10-2018 COP00_18600 44bca24f80fc95e49ed86f75181ef5da 313 Pfam PF01497 Periplasmic binding protein 54 288 3.2E-34 T 13-10-2018 IPR002491 ABC transporter periplasmic binding domain COP00_18600 44bca24f80fc95e49ed86f75181ef5da 313 Gene3D G3DSA:3.40.50.12260 184 286 6.9E-102 T 13-10-2018 COP00_00405 d0b6d81f6c93cd246aaa02e9cf8a25e6 77 Pfam PF02597 ThiS family 4 77 6.9E-13 T 13-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 COP00_00405 d0b6d81f6c93cd246aaa02e9cf8a25e6 77 Gene3D G3DSA:3.10.20.30 1 77 2.0E-20 T 13-10-2018 IPR012675 Beta-grasp domain superfamily COP00_00405 d0b6d81f6c93cd246aaa02e9cf8a25e6 77 SUPERFAMILY SSF54285 1 77 3.36E-14 T 13-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp COP00_00405 d0b6d81f6c93cd246aaa02e9cf8a25e6 77 TIGRFAM TIGR01682 moaD: molybdopterin converting factor, subunit 1 2 77 2.1E-22 T 13-10-2018 COP00_10565 085b2ff5ee1e7e5e5755822f978919fa 485 Gene3D G3DSA:3.40.50.1820 43 274 1.7E-30 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold COP00_10565 085b2ff5ee1e7e5e5755822f978919fa 485 SUPERFAMILY SSF53474 43 239 7.62E-22 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold COP00_07575 e0aec5c13a17f11dc9543522a2bd2d02 442 Gene3D G3DSA:3.30.565.10 306 441 3.4E-27 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily COP00_07575 e0aec5c13a17f11dc9543522a2bd2d02 442 SMART SM00387 345 440 1.5E-6 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase COP00_07575 e0aec5c13a17f11dc9543522a2bd2d02 442 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 351 438 2.8E-10 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase COP00_07575 e0aec5c13a17f11dc9543522a2bd2d02 442 SUPERFAMILY SSF55874 315 437 2.1E-16 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily COP00_07575 e0aec5c13a17f11dc9543522a2bd2d02 442 Pfam PF07730 Histidine kinase 240 306 1.7E-16 T 13-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 COP00_22795 8a91dc73ab4ad1e289997e6d1ac85984 412 Gene3D G3DSA:3.40.47.10 256 400 8.4E-59 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 COP00_22795 8a91dc73ab4ad1e289997e6d1ac85984 412 SMART SM00825 Beta-ketoacyl synthase 6 412 2.2E-16 T 13-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain COP00_22795 8a91dc73ab4ad1e289997e6d1ac85984 412 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 254 368 7.9E-42 T 13-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal COP00_22795 8a91dc73ab4ad1e289997e6d1ac85984 412 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 4 409 5.1E-205 T 13-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 COP00_22795 8a91dc73ab4ad1e289997e6d1ac85984 412 SUPERFAMILY SSF53901 4 251 6.67E-78 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 COP00_22795 8a91dc73ab4ad1e289997e6d1ac85984 412 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 155 171 - T 13-10-2018 IPR018201 Beta-ketoacyl synthase, active site COP00_22795 8a91dc73ab4ad1e289997e6d1ac85984 412 PIRSF PIRSF000447 1 412 9.7E-195 T 13-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 COP00_22795 8a91dc73ab4ad1e289997e6d1ac85984 412 SUPERFAMILY SSF53901 214 411 1.42E-77 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 COP00_22795 8a91dc73ab4ad1e289997e6d1ac85984 412 Gene3D G3DSA:3.40.47.10 1 254 5.5E-109 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 COP00_22795 8a91dc73ab4ad1e289997e6d1ac85984 412 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 4 246 2.2E-61 T 13-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal COP00_04715 2e30caf31a5d7d9c14d9e6aeb4f0e663 86 Pfam PF11122 Inner spore coat protein D 16 65 1.2E-11 T 13-10-2018 IPR020108 Spore coat protein CotD COP00_04715 2e30caf31a5d7d9c14d9e6aeb4f0e663 86 ProDom PD057197 SPORE COAT CAPSID D INNER D COTD SPORULATION 8 77 3.0E-11 T 13-10-2018 IPR020108 Spore coat protein CotD COP00_00855 4bb4ec3dd5f50ac1d0637546587f02dc 365 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 3 143 7.8E-50 T 13-10-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 COP00_00855 4bb4ec3dd5f50ac1d0637546587f02dc 365 Gene3D G3DSA:3.40.50.2000 4 352 3.8E-112 T 13-10-2018 COP00_00855 4bb4ec3dd5f50ac1d0637546587f02dc 365 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 3 362 34.016 T 13-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 COP00_00855 4bb4ec3dd5f50ac1d0637546587f02dc 365 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 1 358 2.5E-110 T 13-10-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0050511 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 COP00_00855 4bb4ec3dd5f50ac1d0637546587f02dc 365 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 188 354 8.2E-43 T 13-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 COP00_00855 4bb4ec3dd5f50ac1d0637546587f02dc 365 SUPERFAMILY SSF53756 1 361 2.3E-109 T 13-10-2018 COP00_00855 4bb4ec3dd5f50ac1d0637546587f02dc 365 Gene3D G3DSA:3.40.50.2000 164 346 3.8E-112 T 13-10-2018 COP00_14550 ffb8777ddc2217fa29f1a4822a744b2f 78 TIGRFAM TIGR01688 dltC: D-alanine--poly(phosphoribitol) ligase, subunit 2 5 76 5.0E-38 T 13-10-2018 IPR003230 D-alanyl carrier protein GO:0019350|GO:0036370 COP00_14550 ffb8777ddc2217fa29f1a4822a744b2f 78 SUPERFAMILY SSF47336 3 77 2.88E-15 T 13-10-2018 IPR036736 ACP-like superfamily COP00_14550 ffb8777ddc2217fa29f1a4822a744b2f 78 Pfam PF00550 Phosphopantetheine attachment site 5 72 1.7E-10 T 13-10-2018 IPR009081 Phosphopantetheine binding ACP domain COP00_14550 ffb8777ddc2217fa29f1a4822a744b2f 78 Hamap MF_00565 D-alanyl carrier protein [dltC]. 1 78 48.997 T 13-10-2018 IPR003230 D-alanyl carrier protein GO:0019350|GO:0036370 COP00_14550 ffb8777ddc2217fa29f1a4822a744b2f 78 Gene3D G3DSA:1.10.1200.10 1 78 1.1E-25 T 13-10-2018 IPR036736 ACP-like superfamily COP00_16615 5068b446d67bcf1698b62b562e04bd9b 141 SUPERFAMILY SSF46906 67 140 8.24E-28 T 13-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily COP00_16615 5068b446d67bcf1698b62b562e04bd9b 141 SMART SM00649 9 140 1.3E-88 T 13-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 COP00_16615 5068b446d67bcf1698b62b562e04bd9b 141 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 66 2.5E-31 T 13-10-2018 IPR020784 Ribosomal protein L11, N-terminal COP00_16615 5068b446d67bcf1698b62b562e04bd9b 141 Pfam PF00298 Ribosomal protein L11, RNA binding domain 71 139 2.3E-26 T 13-10-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 COP00_16615 5068b446d67bcf1698b62b562e04bd9b 141 ProSitePatterns PS00359 Ribosomal protein L11 signature. 126 141 - T 13-10-2018 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 COP00_16615 5068b446d67bcf1698b62b562e04bd9b 141 SUPERFAMILY SSF54747 2 84 8.63E-31 T 13-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily COP00_16615 5068b446d67bcf1698b62b562e04bd9b 141 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 141 32.055 T 13-10-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 COP00_16615 5068b446d67bcf1698b62b562e04bd9b 141 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 73 2.0E-16 T 13-10-2018 COP00_16615 5068b446d67bcf1698b62b562e04bd9b 141 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 141 3.8E-65 T 13-10-2018 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_16615 5068b446d67bcf1698b62b562e04bd9b 141 Gene3D G3DSA:1.10.10.250 72 140 2.6E-30 T 13-10-2018 IPR036769 Ribosomal protein L11, C-terminal domain superfamily COP00_16615 5068b446d67bcf1698b62b562e04bd9b 141 Gene3D G3DSA:3.30.1550.10 2 71 8.4E-35 T 13-10-2018 IPR036796 Ribosomal protein L11/L12, N-terminal domain superfamily COP00_16240 f70ad3279855c748a1f9639607ff4d8a 86 PIRSF PIRSF037257 1 85 2.2E-37 T 13-10-2018 IPR009366 Protein Veg GO:0006355 COP00_16240 f70ad3279855c748a1f9639607ff4d8a 86 Gene3D G3DSA:2.30.30.100 1 78 2.0E-26 T 13-10-2018 COP00_16240 f70ad3279855c748a1f9639607ff4d8a 86 Pfam PF06257 Biofilm formation stimulator VEG 4 74 1.1E-31 T 13-10-2018 IPR009366 Protein Veg GO:0006355 COP00_08825 d3bc22add34d7924e789b6e06ad5e63e 571 SUPERFAMILY SSF89550 334 569 2.09E-54 T 13-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 COP00_08825 d3bc22add34d7924e789b6e06ad5e63e 571 Pfam PF14716 Helix-hairpin-helix domain 4 68 3.0E-16 T 13-10-2018 IPR010996 DNA polymerase beta-like, N-terminal domain COP00_08825 d3bc22add34d7924e789b6e06ad5e63e 571 Gene3D G3DSA:3.30.460.10 152 258 1.1E-19 T 13-10-2018 COP00_08825 d3bc22add34d7924e789b6e06ad5e63e 571 SUPERFAMILY SSF81301 152 314 1.37E-42 T 13-10-2018 COP00_08825 d3bc22add34d7924e789b6e06ad5e63e 571 SUPERFAMILY SSF47802 2 81 9.81E-19 T 13-10-2018 IPR027421 DNA polymerase lambda lyase domain superfamily COP00_08825 d3bc22add34d7924e789b6e06ad5e63e 571 Pfam PF02811 PHP domain 337 464 1.3E-6 T 13-10-2018 IPR004013 PHP domain GO:0003824 COP00_08825 d3bc22add34d7924e789b6e06ad5e63e 571 SMART SM00483 1 314 9.0E-94 T 13-10-2018 IPR002054 DNA-directed DNA polymerase X GO:0003677|GO:0003887 COP00_08825 d3bc22add34d7924e789b6e06ad5e63e 571 PIRSF PIRSF005047 1 570 1.1E-241 T 13-10-2018 IPR022311 Uncharacterised conserved protein UCP005047, YshC KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 COP00_08825 d3bc22add34d7924e789b6e06ad5e63e 571 SMART SM00278 48 67 63.0 T 13-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 COP00_08825 d3bc22add34d7924e789b6e06ad5e63e 571 SMART SM00278 88 107 24.0 T 13-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 COP00_08825 d3bc22add34d7924e789b6e06ad5e63e 571 SMART SM00278 123 142 40.0 T 13-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 COP00_08825 d3bc22add34d7924e789b6e06ad5e63e 571 SMART SM00481 336 415 2.6E-18 T 13-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal COP00_08825 d3bc22add34d7924e789b6e06ad5e63e 571 Pfam PF14791 DNA polymerase beta thumb 253 314 5.5E-19 T 13-10-2018 IPR029398 DNA polymerase beta, thumb domain COP00_08825 d3bc22add34d7924e789b6e06ad5e63e 571 Pfam PF14520 Helix-hairpin-helix domain 90 144 1.0E-7 T 13-10-2018 COP00_08825 d3bc22add34d7924e789b6e06ad5e63e 571 Gene3D G3DSA:1.10.150.20 83 146 1.4E-19 T 13-10-2018 COP00_08825 d3bc22add34d7924e789b6e06ad5e63e 571 Gene3D G3DSA:1.10.150.110 1 82 2.4E-17 T 13-10-2018 IPR027421 DNA polymerase lambda lyase domain superfamily COP00_08825 d3bc22add34d7924e789b6e06ad5e63e 571 Gene3D G3DSA:3.30.210.10 259 323 1.4E-16 T 13-10-2018 IPR037160 DNA polymerase, thumb domain superfamily COP00_08825 d3bc22add34d7924e789b6e06ad5e63e 571 Gene3D G3DSA:3.20.20.140 324 571 8.7E-77 T 13-10-2018 COP00_01330 5b7fed4e44e04e95e74013f06c4b8a2f 467 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 6 467 2.4E-221 T 13-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 COP00_01330 5b7fed4e44e04e95e74013f06c4b8a2f 467 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 3 467 44.17 T 13-10-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 COP00_01330 5b7fed4e44e04e95e74013f06c4b8a2f 467 Pfam PF07724 AAA domain (Cdc48 subfamily) 212 353 7.7E-43 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 COP00_01330 5b7fed4e44e04e95e74013f06c4b8a2f 467 SMART SM00382 51 360 1.9E-11 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_01330 5b7fed4e44e04e95e74013f06c4b8a2f 467 SUPERFAMILY SSF52540 6 465 3.46E-88 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_01330 5b7fed4e44e04e95e74013f06c4b8a2f 467 SMART SM01086 359 453 1.1E-25 T 13-10-2018 IPR019489 Clp ATPase, C-terminal COP00_01330 5b7fed4e44e04e95e74013f06c4b8a2f 467 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 359 429 1.7E-8 T 13-10-2018 IPR019489 Clp ATPase, C-terminal COP00_01330 5b7fed4e44e04e95e74013f06c4b8a2f 467 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 55 104 1.8E-6 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 COP00_01330 5b7fed4e44e04e95e74013f06c4b8a2f 467 Gene3D G3DSA:1.10.8.60 359 464 4.4E-41 T 13-10-2018 COP00_22395 b0b32e2df25d07d2cd4981f48376c1d1 276 SUPERFAMILY SSF161098 6 276 1.57E-67 T 13-10-2018 IPR035906 MetI-like superfamily COP00_22395 b0b32e2df25d07d2cd4981f48376c1d1 276 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 84 269 1.7E-18 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 COP00_22395 b0b32e2df25d07d2cd4981f48376c1d1 276 Gene3D G3DSA:1.10.3720.10 1 263 1.4E-59 T 13-10-2018 IPR035906 MetI-like superfamily COP00_19055 99a42ce022c9890443a4494cd2fba295 116 Gene3D G3DSA:2.30.30.110 1 116 6.9E-52 T 13-10-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor COP00_19055 99a42ce022c9890443a4494cd2fba295 116 SUPERFAMILY SSF50118 2 113 3.27E-41 T 13-10-2018 COP00_19055 99a42ce022c9890443a4494cd2fba295 116 PIRSF PIRSF033490 1 113 5.8E-39 T 13-10-2018 IPR003477 mRNA interferase PemK-like GO:0003677 COP00_19055 99a42ce022c9890443a4494cd2fba295 116 Pfam PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system 4 111 4.5E-33 T 13-10-2018 IPR003477 mRNA interferase PemK-like GO:0003677 COP00_15015 62f8d622f7039178d147c33025c37f37 376 SUPERFAMILY SSF51726 21 376 3.53E-84 T 13-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 COP00_15015 62f8d622f7039178d147c33025c37f37 376 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 23 351 6.8E-13 T 13-10-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 COP00_15015 62f8d622f7039178d147c33025c37f37 376 Gene3D G3DSA:3.20.20.210 14 376 7.0E-127 T 13-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 COP00_17155 ba7cc1f1edfa72878988a8e3ca37eaa6 720 Pfam PF00664 ABC transporter transmembrane region 161 426 4.2E-22 T 13-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 COP00_17155 ba7cc1f1edfa72878988a8e3ca37eaa6 720 ProSitePatterns PS00211 ABC transporters family signature. 611 625 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 COP00_17155 ba7cc1f1edfa72878988a8e3ca37eaa6 720 Pfam PF00005 ABC transporter 490 639 4.1E-36 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 COP00_17155 ba7cc1f1edfa72878988a8e3ca37eaa6 720 Gene3D G3DSA:1.20.1560.10 145 459 1.1E-48 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 COP00_17155 ba7cc1f1edfa72878988a8e3ca37eaa6 720 SUPERFAMILY SSF52540 463 706 9.91E-84 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_17155 ba7cc1f1edfa72878988a8e3ca37eaa6 720 SUPERFAMILY SSF90123 147 460 2.49E-49 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 COP00_17155 ba7cc1f1edfa72878988a8e3ca37eaa6 720 Gene3D G3DSA:3.90.70.10 2 140 8.7E-36 T 13-10-2018 COP00_17155 ba7cc1f1edfa72878988a8e3ca37eaa6 720 Pfam PF03412 Peptidase C39 family 7 133 1.3E-32 T 13-10-2018 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 COP00_17155 ba7cc1f1edfa72878988a8e3ca37eaa6 720 SMART SM00382 499 683 4.8E-18 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_17155 ba7cc1f1edfa72878988a8e3ca37eaa6 720 Gene3D G3DSA:3.40.50.300 466 713 8.5E-86 T 13-10-2018 COP00_10280 9686d2a7daf36be43dd2f8664b74d2b5 429 Pfam PF03471 Transporter associated domain 352 427 4.4E-15 T 13-10-2018 IPR005170 Transporter-associated domain COP00_10280 9686d2a7daf36be43dd2f8664b74d2b5 429 Pfam PF01595 Domain of unknown function DUF21 7 201 1.3E-48 T 13-10-2018 IPR002550 CNNM, transmembrane domain COP00_10280 9686d2a7daf36be43dd2f8664b74d2b5 429 SUPERFAMILY SSF56176 349 426 2.7E-15 T 13-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 COP00_10280 9686d2a7daf36be43dd2f8664b74d2b5 429 SMART SM01091 351 428 3.4E-20 T 13-10-2018 IPR005170 Transporter-associated domain COP00_10280 9686d2a7daf36be43dd2f8664b74d2b5 429 Gene3D G3DSA:3.30.465.10 346 429 3.0E-15 T 13-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 COP00_10280 9686d2a7daf36be43dd2f8664b74d2b5 429 Gene3D G3DSA:3.10.580.10 195 345 1.6E-53 T 13-10-2018 COP00_10280 9686d2a7daf36be43dd2f8664b74d2b5 429 SUPERFAMILY SSF54631 204 338 2.53E-33 T 13-10-2018 COP00_10280 9686d2a7daf36be43dd2f8664b74d2b5 429 Pfam PF00571 CBS domain 218 271 1.9E-9 T 13-10-2018 IPR000644 CBS domain COP00_10280 9686d2a7daf36be43dd2f8664b74d2b5 429 Pfam PF00571 CBS domain 283 335 2.2E-6 T 13-10-2018 IPR000644 CBS domain COP00_10280 9686d2a7daf36be43dd2f8664b74d2b5 429 SMART SM00116 225 275 3.1 T 13-10-2018 IPR000644 CBS domain COP00_10280 9686d2a7daf36be43dd2f8664b74d2b5 429 SMART SM00116 287 335 2.7 T 13-10-2018 IPR000644 CBS domain COP00_00265 372b9a447f59c880797368dd23107f91 306 Pfam PF01584 CheW-like domain 19 150 2.9E-35 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 COP00_00265 372b9a447f59c880797368dd23107f91 306 Pfam PF00072 Response regulator receiver domain 179 298 1.1E-23 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 COP00_00265 372b9a447f59c880797368dd23107f91 306 Gene3D G3DSA:3.40.50.2300 162 305 8.3E-23 T 13-10-2018 COP00_00265 372b9a447f59c880797368dd23107f91 306 SMART SM00448 176 298 1.9E-19 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 COP00_00265 372b9a447f59c880797368dd23107f91 306 Gene3D G3DSA:2.30.30.40 20 144 1.0E-35 T 13-10-2018 COP00_00265 372b9a447f59c880797368dd23107f91 306 Gene3D G3DSA:2.40.50.180 35 150 1.0E-35 T 13-10-2018 COP00_00265 372b9a447f59c880797368dd23107f91 306 PIRSF PIRSF002867 2 306 6.5E-96 T 13-10-2018 IPR024181 Chemotaxis response regulator CheV COP00_00265 372b9a447f59c880797368dd23107f91 306 SMART SM00260 14 150 4.4E-37 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 COP00_00265 372b9a447f59c880797368dd23107f91 306 SUPERFAMILY SSF52172 174 301 2.85E-22 T 13-10-2018 IPR011006 CheY-like superfamily COP00_00265 372b9a447f59c880797368dd23107f91 306 SUPERFAMILY SSF50341 8 152 4.45E-34 T 13-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 COP00_00955 a39ebd5a4edf397dc86a5b4b8de5d1c6 258 SMART SM00363 182 239 1.7E-12 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 COP00_00955 a39ebd5a4edf397dc86a5b4b8de5d1c6 258 Gene3D G3DSA:3.30.70.330 81 166 1.1E-27 T 13-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily COP00_00955 a39ebd5a4edf397dc86a5b4b8de5d1c6 258 Gene3D G3DSA:3.30.1370.160 3 80 2.5E-31 T 13-10-2018 COP00_00955 a39ebd5a4edf397dc86a5b4b8de5d1c6 258 Pfam PF01479 S4 domain 183 227 5.9E-10 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 COP00_00955 a39ebd5a4edf397dc86a5b4b8de5d1c6 258 SUPERFAMILY SSF55174 36 252 7.07E-34 T 13-10-2018 COP00_00955 a39ebd5a4edf397dc86a5b4b8de5d1c6 258 Gene3D G3DSA:3.10.290.10 167 232 6.2E-10 T 13-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 COP00_02900 7995a0404def20afc3ef511b31ab0d79 355 Pfam PF12705 PD-(D/E)XK nuclease superfamily 17 327 3.3E-17 T 13-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type COP00_08640 dad5c5efefc50e03b558f4066f85c43c 449 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 123 136 - T 13-10-2018 IPR033524 Leu/Phe/Val dehydrogenases active site Reactome: R-HSA-2151201|Reactome: R-HSA-70614 COP00_08640 dad5c5efefc50e03b558f4066f85c43c 449 SUPERFAMILY SSF51735 204 448 1.65E-76 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily COP00_08640 dad5c5efefc50e03b558f4066f85c43c 449 Gene3D G3DSA:3.40.50.10860 56 191 3.9E-163 T 13-10-2018 COP00_08640 dad5c5efefc50e03b558f4066f85c43c 449 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 58 186 2.5E-52 T 13-10-2018 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 COP00_08640 dad5c5efefc50e03b558f4066f85c43c 449 PIRSF PIRSF000185 19 449 4.2E-124 T 13-10-2018 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 COP00_08640 dad5c5efefc50e03b558f4066f85c43c 449 Gene3D G3DSA:3.40.50.720 211 374 3.9E-163 T 13-10-2018 COP00_08640 dad5c5efefc50e03b558f4066f85c43c 449 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 204 447 1.2E-89 T 13-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 COP00_08640 dad5c5efefc50e03b558f4066f85c43c 449 Gene3D G3DSA:1.10.285.10 403 449 2.7E-8 T 13-10-2018 COP00_08640 dad5c5efefc50e03b558f4066f85c43c 449 SMART SM00839 206 447 6.4E-92 T 13-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 COP00_08640 dad5c5efefc50e03b558f4066f85c43c 449 Gene3D G3DSA:1.10.285.10 7 385 3.9E-163 T 13-10-2018 COP00_08640 dad5c5efefc50e03b558f4066f85c43c 449 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 115 129 1.7E-31 T 13-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 COP00_08640 dad5c5efefc50e03b558f4066f85c43c 449 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 237 257 1.7E-31 T 13-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 COP00_08640 dad5c5efefc50e03b558f4066f85c43c 449 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 373 384 1.7E-31 T 13-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 COP00_08640 dad5c5efefc50e03b558f4066f85c43c 449 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 195 217 1.7E-31 T 13-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 COP00_08640 dad5c5efefc50e03b558f4066f85c43c 449 SUPERFAMILY SSF53223 7 198 1.5E-75 T 13-10-2018 COP00_02220 9705751cb54d8dc6ec049662d4bd10ce 154 SMART SM00860 22 135 4.4E-9 T 13-10-2018 IPR018958 Knr4/Smi1-like domain COP00_02220 9705751cb54d8dc6ec049662d4bd10ce 154 Pfam PF14567 SMI1-KNR4 cell-wall 7 137 1.4E-31 T 13-10-2018 COP00_02220 9705751cb54d8dc6ec049662d4bd10ce 154 Gene3D G3DSA:3.40.1580.10 1 152 2.2E-44 T 13-10-2018 IPR037883 Knr4/Smi1-like domain superfamily COP00_02220 9705751cb54d8dc6ec049662d4bd10ce 154 SUPERFAMILY SSF160631 1 150 1.18E-37 T 13-10-2018 COP00_01140 edcf6cc90f4103d57751aa1a6888e255 648 SMART SM00740 356 424 3.7E-12 T 13-10-2018 IPR005543 PASTA domain COP00_01140 edcf6cc90f4103d57751aa1a6888e255 648 SMART SM00740 425 492 4.6E-15 T 13-10-2018 IPR005543 PASTA domain COP00_01140 edcf6cc90f4103d57751aa1a6888e255 648 SMART SM00740 493 559 1.2E-13 T 13-10-2018 IPR005543 PASTA domain COP00_01140 edcf6cc90f4103d57751aa1a6888e255 648 SUPERFAMILY SSF56112 8 269 2.97E-83 T 13-10-2018 IPR011009 Protein kinase-like domain superfamily COP00_01140 edcf6cc90f4103d57751aa1a6888e255 648 Gene3D G3DSA:3.30.10.20 497 561 1.5E-14 T 13-10-2018 COP00_01140 edcf6cc90f4103d57751aa1a6888e255 648 Pfam PF03793 PASTA domain 430 491 5.0E-15 T 13-10-2018 IPR005543 PASTA domain COP00_01140 edcf6cc90f4103d57751aa1a6888e255 648 Pfam PF03793 PASTA domain 360 423 3.9E-11 T 13-10-2018 IPR005543 PASTA domain COP00_01140 edcf6cc90f4103d57751aa1a6888e255 648 Pfam PF03793 PASTA domain 498 558 2.0E-12 T 13-10-2018 IPR005543 PASTA domain COP00_01140 edcf6cc90f4103d57751aa1a6888e255 648 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 17 40 - T 13-10-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 COP00_01140 edcf6cc90f4103d57751aa1a6888e255 648 Gene3D G3DSA:3.30.10.20 427 493 2.0E-17 T 13-10-2018 COP00_01140 edcf6cc90f4103d57751aa1a6888e255 648 Gene3D G3DSA:3.30.10.20 357 426 5.7E-14 T 13-10-2018 COP00_01140 edcf6cc90f4103d57751aa1a6888e255 648 Gene3D G3DSA:3.30.200.20 1 90 1.1E-33 T 13-10-2018 COP00_01140 edcf6cc90f4103d57751aa1a6888e255 648 SMART SM00220 11 271 5.1E-75 T 13-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 COP00_01140 edcf6cc90f4103d57751aa1a6888e255 648 Gene3D G3DSA:2.60.40.2560 566 644 3.0E-14 T 13-10-2018 COP00_01140 edcf6cc90f4103d57751aa1a6888e255 648 Gene3D G3DSA:1.10.510.10 92 278 6.8E-54 T 13-10-2018 COP00_01140 edcf6cc90f4103d57751aa1a6888e255 648 ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 130 142 - T 13-10-2018 IPR008271 Serine/threonine-protein kinase, active site GO:0004672|GO:0006468 COP00_01140 edcf6cc90f4103d57751aa1a6888e255 648 Pfam PF00069 Protein kinase domain 11 261 7.7E-56 T 13-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 COP00_13390 0883cf4cfee923d8ab9cca6b26b6e0c1 393 SUPERFAMILY SSF53623 33 235 2.75E-18 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 COP00_13390 0883cf4cfee923d8ab9cca6b26b6e0c1 393 Gene3D G3DSA:3.40.1190.10 30 238 1.1E-16 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 COP00_13390 0883cf4cfee923d8ab9cca6b26b6e0c1 393 PRINTS PR01758 Capsule biosynthesis protein CapB signature 111 126 3.1E-104 T 13-10-2018 IPR008337 Capsule biosynthesis protein CapB GO:0016020|GO:0045227 COP00_13390 0883cf4cfee923d8ab9cca6b26b6e0c1 393 PRINTS PR01758 Capsule biosynthesis protein CapB signature 196 213 3.1E-104 T 13-10-2018 IPR008337 Capsule biosynthesis protein CapB GO:0016020|GO:0045227 COP00_13390 0883cf4cfee923d8ab9cca6b26b6e0c1 393 PRINTS PR01758 Capsule biosynthesis protein CapB signature 293 308 3.1E-104 T 13-10-2018 IPR008337 Capsule biosynthesis protein CapB GO:0016020|GO:0045227 COP00_13390 0883cf4cfee923d8ab9cca6b26b6e0c1 393 PRINTS PR01758 Capsule biosynthesis protein CapB signature 57 74 3.1E-104 T 13-10-2018 IPR008337 Capsule biosynthesis protein CapB GO:0016020|GO:0045227 COP00_13390 0883cf4cfee923d8ab9cca6b26b6e0c1 393 PRINTS PR01758 Capsule biosynthesis protein CapB signature 362 378 3.1E-104 T 13-10-2018 IPR008337 Capsule biosynthesis protein CapB GO:0016020|GO:0045227 COP00_13390 0883cf4cfee923d8ab9cca6b26b6e0c1 393 PRINTS PR01758 Capsule biosynthesis protein CapB signature 140 155 3.1E-104 T 13-10-2018 IPR008337 Capsule biosynthesis protein CapB GO:0016020|GO:0045227 COP00_13390 0883cf4cfee923d8ab9cca6b26b6e0c1 393 PRINTS PR01758 Capsule biosynthesis protein CapB signature 162 179 3.1E-104 T 13-10-2018 IPR008337 Capsule biosynthesis protein CapB GO:0016020|GO:0045227 COP00_13390 0883cf4cfee923d8ab9cca6b26b6e0c1 393 PRINTS PR01758 Capsule biosynthesis protein CapB signature 258 275 3.1E-104 T 13-10-2018 IPR008337 Capsule biosynthesis protein CapB GO:0016020|GO:0045227 COP00_13390 0883cf4cfee923d8ab9cca6b26b6e0c1 393 PRINTS PR01758 Capsule biosynthesis protein CapB signature 34 50 3.1E-104 T 13-10-2018 IPR008337 Capsule biosynthesis protein CapB GO:0016020|GO:0045227 COP00_13390 0883cf4cfee923d8ab9cca6b26b6e0c1 393 PRINTS PR01758 Capsule biosynthesis protein CapB signature 77 95 3.1E-104 T 13-10-2018 IPR008337 Capsule biosynthesis protein CapB GO:0016020|GO:0045227 COP00_13390 0883cf4cfee923d8ab9cca6b26b6e0c1 393 Pfam PF08245 Mur ligase middle domain 37 209 1.5E-9 T 13-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 COP00_13390 0883cf4cfee923d8ab9cca6b26b6e0c1 393 TIGRFAM TIGR04012 poly_gGlu_PgsB: poly-gamma-glutamate synthase PgsB 2 383 8.2E-176 T 13-10-2018 IPR008337 Capsule biosynthesis protein CapB GO:0016020|GO:0045227 COP00_21455 d7cad46a75942cde709dfaa339d93610 382 SMART SM00567 E-Z type HEAT repeats 298 327 540.0 T 13-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 COP00_21455 d7cad46a75942cde709dfaa339d93610 382 SMART SM00567 E-Z type HEAT repeats 330 359 0.0025 T 13-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 COP00_21455 d7cad46a75942cde709dfaa339d93610 382 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 11 342 1.7E-131 T 13-10-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 COP00_21455 d7cad46a75942cde709dfaa339d93610 382 SUPERFAMILY SSF54862 164 251 1.46E-15 T 13-10-2018 COP00_21455 d7cad46a75942cde709dfaa339d93610 382 Gene3D G3DSA:3.30.70.20 180 260 2.2E-5 T 13-10-2018 COP00_21455 d7cad46a75942cde709dfaa339d93610 382 SUPERFAMILY SSF48371 263 364 5.04E-12 T 13-10-2018 IPR016024 Armadillo-type fold COP00_21455 d7cad46a75942cde709dfaa339d93610 382 Pfam PF13646 HEAT repeats 300 370 6.5E-13 T 13-10-2018 COP00_21455 d7cad46a75942cde709dfaa339d93610 382 Gene3D G3DSA:1.25.10.10 265 380 4.0E-10 T 13-10-2018 IPR011989 Armadillo-like helical COP00_21455 d7cad46a75942cde709dfaa339d93610 382 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 188 199 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site COP00_21455 d7cad46a75942cde709dfaa339d93610 382 Hamap MF_00916 Epoxyqueuosine reductase [queG]. 3 309 43.264 T 13-10-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 COP00_21455 d7cad46a75942cde709dfaa339d93610 382 Pfam PF13484 4Fe-4S double cluster binding domain 187 250 4.5E-17 T 13-10-2018 COP00_21455 d7cad46a75942cde709dfaa339d93610 382 Pfam PF08331 Domain of unknown function (DUF1730) 57 135 2.5E-19 T 13-10-2018 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700 COP00_23940 55ff20c7274a2b052e972fec64f24b0d 300 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 17 299 47.271 T 13-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 COP00_23940 55ff20c7274a2b052e972fec64f24b0d 300 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 21 299 2.9E-132 T 13-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 COP00_23940 55ff20c7274a2b052e972fec64f24b0d 300 SUPERFAMILY SSF53328 104 300 1.44E-62 T 13-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 COP00_23940 55ff20c7274a2b052e972fec64f24b0d 300 Pfam PF00551 Formyl transferase 104 281 8.3E-45 T 13-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 COP00_23940 55ff20c7274a2b052e972fec64f24b0d 300 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 55 67 4.0E-65 T 13-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 COP00_23940 55ff20c7274a2b052e972fec64f24b0d 300 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 22 48 4.0E-65 T 13-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 COP00_23940 55ff20c7274a2b052e972fec64f24b0d 300 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 105 127 4.0E-65 T 13-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 COP00_23940 55ff20c7274a2b052e972fec64f24b0d 300 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 273 298 4.0E-65 T 13-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 COP00_23940 55ff20c7274a2b052e972fec64f24b0d 300 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 127 154 4.0E-65 T 13-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 COP00_23940 55ff20c7274a2b052e972fec64f24b0d 300 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 251 273 4.0E-65 T 13-10-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497|MetaCyc: PWY-7909 COP00_23940 55ff20c7274a2b052e972fec64f24b0d 300 Gene3D G3DSA:3.40.50.170 104 300 1.3E-71 T 13-10-2018 COP00_23940 55ff20c7274a2b052e972fec64f24b0d 300 Gene3D G3DSA:3.30.70.260 14 102 4.9E-26 T 13-10-2018 COP00_23940 55ff20c7274a2b052e972fec64f24b0d 300 SUPERFAMILY SSF55021 19 101 1.08E-17 T 13-10-2018 COP00_23940 55ff20c7274a2b052e972fec64f24b0d 300 PIRSF PIRSF036480 17 300 3.1E-113 T 13-10-2018 COP00_23940 55ff20c7274a2b052e972fec64f24b0d 300 Pfam PF01842 ACT domain 21 68 4.2E-9 T 13-10-2018 IPR002912 ACT domain COP00_08110 8ad874029047bcd1efd7936254949d49 365 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 20 363 1.6E-122 T 13-10-2018 IPR003770 Endolytic murein transglycosylase COP00_08110 8ad874029047bcd1efd7936254949d49 365 Hamap MF_02065 Endolytic murein transglycosylase [mltG]. 25 364 33.072 T 13-10-2018 IPR003770 Endolytic murein transglycosylase COP00_08110 8ad874029047bcd1efd7936254949d49 365 Gene3D G3DSA:1.10.8.1150 52 125 1.5E-21 T 13-10-2018 COP00_08110 8ad874029047bcd1efd7936254949d49 365 Gene3D G3DSA:3.30.160.60 331 365 1.9E-5 T 13-10-2018 COP00_08110 8ad874029047bcd1efd7936254949d49 365 Pfam PF02618 YceG-like family 58 357 2.6E-81 T 13-10-2018 IPR003770 Endolytic murein transglycosylase COP00_21670 de20ec8566e5e9b62248c1392d0be83c 330 SUPERFAMILY SSF51735 133 302 2.63E-39 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily COP00_21670 de20ec8566e5e9b62248c1392d0be83c 330 Pfam PF00107 Zinc-binding dehydrogenase 169 291 2.8E-28 T 13-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 COP00_21670 de20ec8566e5e9b62248c1392d0be83c 330 Gene3D G3DSA:3.90.180.10 19 319 2.5E-89 T 13-10-2018 COP00_21670 de20ec8566e5e9b62248c1392d0be83c 330 SUPERFAMILY SSF50129 2 160 4.4E-33 T 13-10-2018 IPR011032 GroES-like superfamily COP00_21670 de20ec8566e5e9b62248c1392d0be83c 330 Gene3D G3DSA:3.40.50.720 139 276 2.5E-89 T 13-10-2018 COP00_21670 de20ec8566e5e9b62248c1392d0be83c 330 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 125 8.4E-14 T 13-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 COP00_21670 de20ec8566e5e9b62248c1392d0be83c 330 SMART SM00829 11 326 6.1E-16 T 13-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 COP00_16575 ee5410854710d5d6442bdf75eee506ec 467 SMART SM00840 353 416 2.5E-20 T 13-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 COP00_16575 ee5410854710d5d6442bdf75eee506ec 467 Gene3D G3DSA:1.20.120.640 306 464 5.3E-38 T 13-10-2018 COP00_16575 ee5410854710d5d6442bdf75eee506ec 467 Gene3D G3DSA:3.40.50.620 1 305 1.3E-136 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold COP00_16575 ee5410854710d5d6442bdf75eee506ec 467 Pfam PF09190 DALR domain 353 413 1.8E-18 T 13-10-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 COP00_16575 ee5410854710d5d6442bdf75eee506ec 467 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 62 71 1.1E-29 T 13-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 COP00_16575 ee5410854710d5d6442bdf75eee506ec 467 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 222 243 1.1E-29 T 13-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 COP00_16575 ee5410854710d5d6442bdf75eee506ec 467 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 191 209 1.1E-29 T 13-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 COP00_16575 ee5410854710d5d6442bdf75eee506ec 467 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 26 37 1.1E-29 T 13-10-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 COP00_16575 ee5410854710d5d6442bdf75eee506ec 467 SUPERFAMILY SSF52374 4 314 1.05E-103 T 13-10-2018 COP00_16575 ee5410854710d5d6442bdf75eee506ec 467 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 16 313 1.8E-137 T 13-10-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 COP00_16575 ee5410854710d5d6442bdf75eee506ec 467 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 3 465 39.444 T 13-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 COP00_16575 ee5410854710d5d6442bdf75eee506ec 467 SUPERFAMILY SSF47323 340 464 7.85E-38 T 13-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 COP00_16575 ee5410854710d5d6442bdf75eee506ec 467 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 3 464 1.4E-195 T 13-10-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 COP00_14590 31b4958bc6407de4a62776bb00a61d88 648 SUPERFAMILY SSF63520 174 283 5.62E-21 T 13-10-2018 IPR036634 PRD domain superfamily GO:0006355 COP00_14590 31b4958bc6407de4a62776bb00a61d88 648 Pfam PF08279 HTH domain 5 63 8.1E-12 T 13-10-2018 IPR013196 Helix-turn-helix, type 11 COP00_14590 31b4958bc6407de4a62776bb00a61d88 648 SUPERFAMILY SSF52794 409 486 5.07E-7 T 13-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 COP00_14590 31b4958bc6407de4a62776bb00a61d88 648 SUPERFAMILY SSF63520 309 402 7.46E-23 T 13-10-2018 IPR036634 PRD domain superfamily GO:0006355 COP00_14590 31b4958bc6407de4a62776bb00a61d88 648 Gene3D G3DSA:1.10.1790.10 187 284 2.5E-15 T 13-10-2018 COP00_14590 31b4958bc6407de4a62776bb00a61d88 648 Gene3D G3DSA:1.10.1790.10 301 400 4.7E-24 T 13-10-2018 COP00_14590 31b4958bc6407de4a62776bb00a61d88 648 SUPERFAMILY SSF55804 502 639 2.49E-27 T 13-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 COP00_14590 31b4958bc6407de4a62776bb00a61d88 648 Pfam PF00874 PRD domain 310 398 1.4E-22 T 13-10-2018 IPR011608 PRD domain GO:0006355 COP00_14590 31b4958bc6407de4a62776bb00a61d88 648 Pfam PF00874 PRD domain 203 281 5.1E-16 T 13-10-2018 IPR011608 PRD domain GO:0006355 COP00_14590 31b4958bc6407de4a62776bb00a61d88 648 SUPERFAMILY SSF46785 2 64 5.44E-5 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_14590 31b4958bc6407de4a62776bb00a61d88 648 Pfam PF05043 Mga helix-turn-helix domain 71 166 5.9E-19 T 13-10-2018 IPR007737 Mga helix-turn-helix domain COP00_14590 31b4958bc6407de4a62776bb00a61d88 648 Gene3D G3DSA:3.40.930.10 502 640 1.1E-25 T 13-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 COP00_14590 31b4958bc6407de4a62776bb00a61d88 648 Gene3D G3DSA:1.10.10.10 1 65 2.5E-13 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_14590 31b4958bc6407de4a62776bb00a61d88 648 Gene3D G3DSA:1.10.10.10 78 154 1.9E-7 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_14590 31b4958bc6407de4a62776bb00a61d88 648 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 503 639 7.2E-29 T 13-10-2018 IPR002178 PTS EIIA type-2 domain COP00_14590 31b4958bc6407de4a62776bb00a61d88 648 Gene3D G3DSA:3.40.50.2300 409 493 1.6E-8 T 13-10-2018 COP00_11605 a919dcccf11a181ec566d97185b42dd6 87 Pfam PF04688 SPP1 phage holin 4 82 5.1E-29 T 13-10-2018 IPR006479 Holin COP00_11605 a919dcccf11a181ec566d97185b42dd6 87 TIGRFAM TIGR01592 holin_SPP1: holin, SPP1 family 5 85 1.6E-33 T 13-10-2018 IPR006479 Holin COP00_11605 a919dcccf11a181ec566d97185b42dd6 87 ProDom PD008023 HOLIN TRANSMEMBRANE MEMBRANE PROPHAGE FAMILY BHLB SPP1 5'REGION HOLIN ORF050 5 87 2.0E-36 T 13-10-2018 IPR006479 Holin COP00_04425 6cd13af45e2ec716792845033175fca1 368 Gene3D G3DSA:1.20.1740.10 6 366 3.1E-12 T 13-10-2018 COP00_04425 6cd13af45e2ec716792845033175fca1 368 Pfam PF03845 Spore germination protein 7 327 3.5E-98 T 13-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 COP00_04425 6cd13af45e2ec716792845033175fca1 368 TIGRFAM TIGR00912 2A0309: spore germination protein (amino acid permease) 7 362 1.2E-79 T 13-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 COP00_23785 652ca5113137d809979321318d8e437c 226 Gene3D G3DSA:2.60.120.200 2 226 2.9E-91 T 13-10-2018 COP00_23785 652ca5113137d809979321318d8e437c 226 Pfam PF09224 Domain of unknown function (DUF1961) 9 222 8.5E-104 T 13-10-2018 IPR015305 Protein of unknown function DUF1961 COP00_23785 652ca5113137d809979321318d8e437c 226 SUPERFAMILY SSF49899 4 226 5.7E-112 T 13-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily COP00_23785 652ca5113137d809979321318d8e437c 226 ProDom PD113327 YESU 3D-STRUCTURE 10 226 4.0E-93 T 13-10-2018 IPR015305 Protein of unknown function DUF1961 COP00_00770 ff14921b4c3c78c2ee5fd0f890b713f9 340 SUPERFAMILY SSF54211 228 333 1.71E-21 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold COP00_00770 ff14921b4c3c78c2ee5fd0f890b713f9 340 Gene3D G3DSA:2.30.42.10 122 215 2.2E-26 T 13-10-2018 COP00_00770 ff14921b4c3c78c2ee5fd0f890b713f9 340 Pfam PF13180 PDZ domain 126 195 2.3E-15 T 13-10-2018 IPR001478 PDZ domain GO:0005515 COP00_00770 ff14921b4c3c78c2ee5fd0f890b713f9 340 SUPERFAMILY SSF50156 127 212 3.42E-16 T 13-10-2018 IPR036034 PDZ superfamily GO:0005515 COP00_00770 ff14921b4c3c78c2ee5fd0f890b713f9 340 Gene3D G3DSA:3.30.230.10 216 340 1.7E-10 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup COP00_00770 ff14921b4c3c78c2ee5fd0f890b713f9 340 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 232 332 4.0E-12 T 13-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 COP00_00770 ff14921b4c3c78c2ee5fd0f890b713f9 340 SMART SM00228 119 186 2.9E-7 T 13-10-2018 IPR001478 PDZ domain GO:0005515 COP00_09135 4ad6b50e876d8744a6a75b272d522e7d 411 SMART SM00919 160 384 6.6E-136 T 13-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 COP00_09135 4ad6b50e876d8744a6a75b272d522e7d 411 PIRSF PIRSF000106 42 407 1.0E-84 T 13-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 COP00_09135 4ad6b50e876d8744a6a75b272d522e7d 411 Pfam PF00390 Malic enzyme, N-terminal domain 16 148 3.8E-30 T 13-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 COP00_09135 4ad6b50e876d8744a6a75b272d522e7d 411 SMART SM01274 15 148 2.7E-86 T 13-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 COP00_09135 4ad6b50e876d8744a6a75b272d522e7d 411 Gene3D G3DSA:3.40.50.10380 1 157 7.4E-76 T 13-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 COP00_09135 4ad6b50e876d8744a6a75b272d522e7d 411 SUPERFAMILY SSF53223 5 158 2.52E-57 T 13-10-2018 COP00_09135 4ad6b50e876d8744a6a75b272d522e7d 411 PRINTS PR00072 Malic enzyme signature 156 172 1.3E-7 T 13-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 COP00_09135 4ad6b50e876d8744a6a75b272d522e7d 411 PRINTS PR00072 Malic enzyme signature 77 99 1.3E-7 T 13-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 COP00_09135 4ad6b50e876d8744a6a75b272d522e7d 411 PRINTS PR00072 Malic enzyme signature 276 292 1.3E-7 T 13-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 COP00_09135 4ad6b50e876d8744a6a75b272d522e7d 411 ProSitePatterns PS00331 Malic enzymes signature. 156 172 - T 13-10-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 COP00_09135 4ad6b50e876d8744a6a75b272d522e7d 411 Gene3D G3DSA:3.40.50.720 158 411 2.4E-90 T 13-10-2018 COP00_09135 4ad6b50e876d8744a6a75b272d522e7d 411 Pfam PF03949 Malic enzyme, NAD binding domain 162 383 1.8E-25 T 13-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 COP00_09135 4ad6b50e876d8744a6a75b272d522e7d 411 SUPERFAMILY SSF51735 160 405 2.35E-85 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily COP00_21250 a00118acbc32d5c8b82e3bca98dd20cb 294 Pfam PF14540 Nucleotidyltransferase-like 1 118 8.4E-50 T 13-10-2018 IPR029348 Nucleotidyltransferase-like domain COP00_21250 a00118acbc32d5c8b82e3bca98dd20cb 294 Gene3D G3DSA:1.20.120.330 115 232 2.2E-48 T 13-10-2018 COP00_21250 a00118acbc32d5c8b82e3bca98dd20cb 294 ProDom PD128250 YGXA BH0953 1 276 1.0E-150 T 13-10-2018 COP00_21250 a00118acbc32d5c8b82e3bca98dd20cb 294 Gene3D G3DSA:3.30.460.10 1 114 1.2E-44 T 13-10-2018 COP00_10790 8149aa52a9b6e522da9c5243a56bb1e8 256 TIGRFAM TIGR01457 HAD-SF-IIA-hyp2: HAD hydrolase, TIGR01457 family 4 252 3.6E-134 T 13-10-2018 IPR006354 HAD-superfamily hydrolase, subfamily IIA, hypothetical 1 COP00_10790 8149aa52a9b6e522da9c5243a56bb1e8 256 SUPERFAMILY SSF56784 4 253 3.47E-75 T 13-10-2018 IPR036412 HAD-like superfamily COP00_10790 8149aa52a9b6e522da9c5243a56bb1e8 256 Gene3D G3DSA:3.40.50.1000 5 230 8.8E-91 T 13-10-2018 IPR023214 HAD superfamily COP00_10790 8149aa52a9b6e522da9c5243a56bb1e8 256 PIRSF PIRSF000915 1 115 6.9E-27 T 13-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA COP00_10790 8149aa52a9b6e522da9c5243a56bb1e8 256 PIRSF PIRSF000915 111 256 4.2E-35 T 13-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA COP00_10790 8149aa52a9b6e522da9c5243a56bb1e8 256 TIGRFAM TIGR01460 HAD-SF-IIA: HAD hydrolase, family IIA 8 228 7.6E-41 T 13-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA COP00_10790 8149aa52a9b6e522da9c5243a56bb1e8 256 Pfam PF13344 Haloacid dehalogenase-like hydrolase 8 106 1.7E-27 T 13-10-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA COP00_10790 8149aa52a9b6e522da9c5243a56bb1e8 256 Pfam PF13242 HAD-hyrolase-like 179 251 2.5E-23 T 13-10-2018 COP00_10790 8149aa52a9b6e522da9c5243a56bb1e8 256 Gene3D G3DSA:3.40.50.1000 84 179 8.8E-91 T 13-10-2018 IPR023214 HAD superfamily COP00_19700 618e986ad32160978abe43f6537209a3 243 SUPERFAMILY SSF52096 13 193 2.65E-47 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily COP00_19700 618e986ad32160978abe43f6537209a3 243 PRINTS PR00127 Clp protease catalytic subunit P signature 56 76 1.4E-12 T 13-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 COP00_19700 618e986ad32160978abe43f6537209a3 243 PRINTS PR00127 Clp protease catalytic subunit P signature 165 184 1.4E-12 T 13-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 COP00_19700 618e986ad32160978abe43f6537209a3 243 PRINTS PR00127 Clp protease catalytic subunit P signature 106 125 1.4E-12 T 13-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 COP00_19700 618e986ad32160978abe43f6537209a3 243 Pfam PF00574 Clp protease 51 189 1.9E-33 T 13-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA COP00_19700 618e986ad32160978abe43f6537209a3 243 Gene3D G3DSA:3.90.226.10 2 200 2.0E-48 T 13-10-2018 COP00_15330 8c53df8704e8250fec28fc030b266188 512 SUPERFAMILY SSF52540 328 508 3.25E-40 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_15330 8c53df8704e8250fec28fc030b266188 512 SMART SM00382 28 237 4.4E-12 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_15330 8c53df8704e8250fec28fc030b266188 512 SMART SM00382 346 511 3.2E-11 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_15330 8c53df8704e8250fec28fc030b266188 512 Gene3D G3DSA:3.40.50.300 2 285 5.7E-66 T 13-10-2018 COP00_15330 8c53df8704e8250fec28fc030b266188 512 ProSitePatterns PS00211 ABC transporters family signature. 162 176 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 COP00_15330 8c53df8704e8250fec28fc030b266188 512 ProSitePatterns PS00211 ABC transporters family signature. 437 451 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 COP00_15330 8c53df8704e8250fec28fc030b266188 512 SUPERFAMILY SSF52540 6 243 1.17E-45 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_15330 8c53df8704e8250fec28fc030b266188 512 Pfam PF00005 ABC transporter 20 190 2.9E-24 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 COP00_15330 8c53df8704e8250fec28fc030b266188 512 Pfam PF12848 ABC transporter 229 311 4.4E-24 T 13-10-2018 IPR032781 ABC-transporter extension domain COP00_15330 8c53df8704e8250fec28fc030b266188 512 Pfam PF00005 ABC transporter 338 465 4.7E-24 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 COP00_15330 8c53df8704e8250fec28fc030b266188 512 Gene3D G3DSA:3.40.50.300 286 511 7.9E-47 T 13-10-2018 COP00_11945 8049c79e7429fbf950f260e34ae97504 178 SUPERFAMILY SSF46785 8 161 2.73E-21 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_11945 8049c79e7429fbf950f260e34ae97504 178 PIRSF PIRSF006707 2 178 9.5E-53 T 13-10-2018 IPR026282 DNA-binding protein, MJ1563 type COP00_11945 8049c79e7429fbf950f260e34ae97504 178 Gene3D G3DSA:1.10.10.10 7 91 4.3E-21 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_00245 2ff8bfe53ee4ee4d81e70d9288e41266 603 SUPERFAMILY SSF55785 250 376 7.93E-13 T 13-10-2018 IPR035965 PAS domain superfamily COP00_00245 2ff8bfe53ee4ee4d81e70d9288e41266 603 Gene3D G3DSA:3.30.450.20 138 256 1.3E-12 T 13-10-2018 COP00_00245 2ff8bfe53ee4ee4d81e70d9288e41266 603 SUPERFAMILY SSF47384 389 456 6.47E-13 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 COP00_00245 2ff8bfe53ee4ee4d81e70d9288e41266 603 Pfam PF08447 PAS fold 27 96 1.4E-6 T 13-10-2018 IPR013655 PAS fold-3 GO:0005515 COP00_00245 2ff8bfe53ee4ee4d81e70d9288e41266 603 Gene3D G3DSA:3.30.450.20 16 117 3.1E-21 T 13-10-2018 COP00_00245 2ff8bfe53ee4ee4d81e70d9288e41266 603 Pfam PF00512 His Kinase A (phospho-acceptor) domain 395 454 5.2E-16 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 COP00_00245 2ff8bfe53ee4ee4d81e70d9288e41266 603 Gene3D G3DSA:1.10.287.130 381 456 1.6E-18 T 13-10-2018 COP00_00245 2ff8bfe53ee4ee4d81e70d9288e41266 603 Gene3D G3DSA:3.30.565.10 458 603 1.5E-43 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily COP00_00245 2ff8bfe53ee4ee4d81e70d9288e41266 603 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 499 602 3.7E-22 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase COP00_00245 2ff8bfe53ee4ee4d81e70d9288e41266 603 SMART SM00091 265 331 6.1E-9 T 13-10-2018 IPR000014 PAS domain COP00_00245 2ff8bfe53ee4ee4d81e70d9288e41266 603 SMART SM00091 141 207 6.9E-8 T 13-10-2018 IPR000014 PAS domain COP00_00245 2ff8bfe53ee4ee4d81e70d9288e41266 603 SMART SM00091 2 71 6.0E-4 T 13-10-2018 IPR000014 PAS domain COP00_00245 2ff8bfe53ee4ee4d81e70d9288e41266 603 SMART SM00387 499 603 1.6E-31 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase COP00_00245 2ff8bfe53ee4ee4d81e70d9288e41266 603 Gene3D G3DSA:3.30.450.20 259 380 5.2E-13 T 13-10-2018 COP00_00245 2ff8bfe53ee4ee4d81e70d9288e41266 603 PRINTS PR00344 Bacterial sensor protein C-terminal signature 565 583 7.9E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 COP00_00245 2ff8bfe53ee4ee4d81e70d9288e41266 603 PRINTS PR00344 Bacterial sensor protein C-terminal signature 589 602 7.9E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 COP00_00245 2ff8bfe53ee4ee4d81e70d9288e41266 603 PRINTS PR00344 Bacterial sensor protein C-terminal signature 536 550 7.9E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 COP00_00245 2ff8bfe53ee4ee4d81e70d9288e41266 603 PRINTS PR00344 Bacterial sensor protein C-terminal signature 554 564 7.9E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 COP00_00245 2ff8bfe53ee4ee4d81e70d9288e41266 603 Pfam PF00989 PAS fold 141 246 9.7E-15 T 13-10-2018 IPR013767 PAS fold GO:0006355 COP00_00245 2ff8bfe53ee4ee4d81e70d9288e41266 603 Pfam PF00989 PAS fold 265 375 2.3E-12 T 13-10-2018 IPR013767 PAS fold GO:0006355 COP00_00245 2ff8bfe53ee4ee4d81e70d9288e41266 603 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 140 256 1.8E-12 T 13-10-2018 IPR000014 PAS domain COP00_00245 2ff8bfe53ee4ee4d81e70d9288e41266 603 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 6 102 6.2E-6 T 13-10-2018 IPR000014 PAS domain COP00_00245 2ff8bfe53ee4ee4d81e70d9288e41266 603 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 262 383 9.6E-11 T 13-10-2018 IPR000014 PAS domain COP00_00245 2ff8bfe53ee4ee4d81e70d9288e41266 603 SUPERFAMILY SSF55785 156 260 5.83E-12 T 13-10-2018 IPR035965 PAS domain superfamily COP00_00245 2ff8bfe53ee4ee4d81e70d9288e41266 603 SMART SM00388 393 456 4.1E-15 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 COP00_00245 2ff8bfe53ee4ee4d81e70d9288e41266 603 SUPERFAMILY SSF55874 447 603 2.36E-39 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily COP00_00245 2ff8bfe53ee4ee4d81e70d9288e41266 603 SUPERFAMILY SSF55785 20 101 5.11E-12 T 13-10-2018 IPR035965 PAS domain superfamily COP00_16665 297c6f9a9bd9628f1d083751e0b045be 692 SUPERFAMILY SSF54211 477 597 2.5E-44 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold COP00_16665 297c6f9a9bd9628f1d083751e0b045be 692 SUPERFAMILY SSF50447 263 402 6.82E-37 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily COP00_16665 297c6f9a9bd9628f1d083751e0b045be 692 Pfam PF00679 Elongation factor G C-terminus 598 684 1.4E-31 T 13-10-2018 IPR000640 Elongation factor EFG, domain V-like COP00_16665 297c6f9a9bd9628f1d083751e0b045be 692 Gene3D G3DSA:3.40.50.300 1 292 4.9E-114 T 13-10-2018 COP00_16665 297c6f9a9bd9628f1d083751e0b045be 692 Gene3D G3DSA:2.40.30.10 293 403 1.0E-46 T 13-10-2018 COP00_16665 297c6f9a9bd9628f1d083751e0b045be 692 SUPERFAMILY SSF54980 601 688 2.06E-31 T 13-10-2018 IPR035647 EF-G domain III/V-like COP00_16665 297c6f9a9bd9628f1d083751e0b045be 692 Gene3D G3DSA:3.30.70.240 602 672 2.3E-95 T 13-10-2018 COP00_16665 297c6f9a9bd9628f1d083751e0b045be 692 Pfam PF00009 Elongation factor Tu GTP binding domain 9 279 4.7E-69 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 COP00_16665 297c6f9a9bd9628f1d083751e0b045be 692 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 181 1.7E-47 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 COP00_16665 297c6f9a9bd9628f1d083751e0b045be 692 SUPERFAMILY SSF54980 400 478 1.55E-26 T 13-10-2018 IPR035647 EF-G domain III/V-like COP00_16665 297c6f9a9bd9628f1d083751e0b045be 692 SMART SM00889 478 596 3.6E-74 T 13-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 COP00_16665 297c6f9a9bd9628f1d083751e0b045be 692 SMART SM00838 598 685 2.6E-58 T 13-10-2018 IPR000640 Elongation factor EFG, domain V-like COP00_16665 297c6f9a9bd9628f1d083751e0b045be 692 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 13-10-2018 IPR031157 Tr-type G domain, conserved site COP00_16665 297c6f9a9bd9628f1d083751e0b045be 692 Hamap MF_00054_B Elongation factor G [fusA]. 6 689 113.95 T 13-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 COP00_16665 297c6f9a9bd9628f1d083751e0b045be 692 SUPERFAMILY SSF52540 6 279 5.28E-111 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_16665 297c6f9a9bd9628f1d083751e0b045be 692 TIGRFAM TIGR00484 EF-G: translation elongation factor G 1 690 0.0 T 13-10-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 COP00_16665 297c6f9a9bd9628f1d083751e0b045be 692 Pfam PF14492 Elongation Factor G, domain II 402 475 7.3E-36 T 13-10-2018 COP00_16665 297c6f9a9bd9628f1d083751e0b045be 692 Pfam PF03144 Elongation factor Tu domain 2 322 389 1.7E-16 T 13-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 COP00_16665 297c6f9a9bd9628f1d083751e0b045be 692 Pfam PF03764 Elongation factor G, domain IV 477 595 8.2E-47 T 13-10-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 COP00_16665 297c6f9a9bd9628f1d083751e0b045be 692 Gene3D G3DSA:3.30.230.10 482 685 2.3E-95 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup COP00_16665 297c6f9a9bd9628f1d083751e0b045be 692 PRINTS PR00315 GTP-binding elongation factor signature 78 88 4.7E-17 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 COP00_16665 297c6f9a9bd9628f1d083751e0b045be 692 PRINTS PR00315 GTP-binding elongation factor signature 94 105 4.7E-17 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 COP00_16665 297c6f9a9bd9628f1d083751e0b045be 692 PRINTS PR00315 GTP-binding elongation factor signature 130 139 4.7E-17 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 COP00_16665 297c6f9a9bd9628f1d083751e0b045be 692 PRINTS PR00315 GTP-binding elongation factor signature 12 25 4.7E-17 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 COP00_16665 297c6f9a9bd9628f1d083751e0b045be 692 PRINTS PR00315 GTP-binding elongation factor signature 58 66 4.7E-17 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 COP00_16665 297c6f9a9bd9628f1d083751e0b045be 692 Gene3D G3DSA:3.30.70.870 404 481 3.7E-33 T 13-10-2018 COP00_22990 0a63146ad908318d2e6036cacd92ef95 270 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 6 260 1.7E-102 T 13-10-2018 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 COP00_22990 0a63146ad908318d2e6036cacd92ef95 270 Gene3D G3DSA:3.40.1190.20 1 269 8.5E-104 T 13-10-2018 IPR029056 Ribokinase-like COP00_22990 0a63146ad908318d2e6036cacd92ef95 270 SUPERFAMILY SSF53613 5 262 1.71E-82 T 13-10-2018 IPR029056 Ribokinase-like COP00_22990 0a63146ad908318d2e6036cacd92ef95 270 Pfam PF08543 Phosphomethylpyrimidine kinase 13 258 1.3E-94 T 13-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 COP00_11410 18b0bc60486cbee2fee8380e863e088c 977 PRINTS PR00133 Glycosyl hydrolase family 3 signature 187 203 7.4E-7 T 13-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 COP00_11410 18b0bc60486cbee2fee8380e863e088c 977 PRINTS PR00133 Glycosyl hydrolase family 3 signature 98 117 7.4E-7 T 13-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 COP00_11410 18b0bc60486cbee2fee8380e863e088c 977 Gene3D G3DSA:2.60.120.380 460 585 2.2E-208 T 13-10-2018 COP00_11410 18b0bc60486cbee2fee8380e863e088c 977 Gene3D G3DSA:2.60.120.260 843 977 2.5E-31 T 13-10-2018 IPR008979 Galactose-binding-like domain superfamily COP00_11410 18b0bc60486cbee2fee8380e863e088c 977 SMART SM00606 852 977 9.8E-25 T 13-10-2018 IPR006584 Cellulose binding, type IV GO:0030246 COP00_11410 18b0bc60486cbee2fee8380e863e088c 977 Gene3D G3DSA:3.20.20.300 50 729 2.2E-208 T 13-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 COP00_11410 18b0bc60486cbee2fee8380e863e088c 977 SMART SM01217 763 834 9.2E-25 T 13-10-2018 IPR026891 Fibronectin type III-like domain COP00_11410 18b0bc60486cbee2fee8380e863e088c 977 Pfam PF14310 Fibronectin type III-like domain 763 834 1.3E-21 T 13-10-2018 IPR026891 Fibronectin type III-like domain COP00_11410 18b0bc60486cbee2fee8380e863e088c 977 SUPERFAMILY SSF52279 381 729 5.36E-50 T 13-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 COP00_11410 18b0bc60486cbee2fee8380e863e088c 977 Gene3D G3DSA:2.60.40.10 730 842 2.5E-34 T 13-10-2018 IPR013783 Immunoglobulin-like fold COP00_11410 18b0bc60486cbee2fee8380e863e088c 977 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 381 726 1.5E-63 T 13-10-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 COP00_11410 18b0bc60486cbee2fee8380e863e088c 977 Gene3D G3DSA:3.40.50.1700 374 693 2.2E-208 T 13-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 COP00_11410 18b0bc60486cbee2fee8380e863e088c 977 SUPERFAMILY SSF51445 36 380 7.9E-72 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily COP00_11410 18b0bc60486cbee2fee8380e863e088c 977 Pfam PF06268 Fascin domain 458 570 2.3E-8 T 13-10-2018 IPR022768 Fascin domain GO:0030674|GO:0051015 COP00_11410 18b0bc60486cbee2fee8380e863e088c 977 SUPERFAMILY SSF49785 851 976 9.35E-22 T 13-10-2018 IPR008979 Galactose-binding-like domain superfamily COP00_11410 18b0bc60486cbee2fee8380e863e088c 977 SUPERFAMILY SSF50405 451 572 6.15E-18 T 13-10-2018 IPR008999 Actin-crosslinking COP00_11410 18b0bc60486cbee2fee8380e863e088c 977 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 74 337 5.3E-37 T 13-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 COP00_11410 18b0bc60486cbee2fee8380e863e088c 977 Pfam PF03422 Carbohydrate binding module (family 6) 861 976 1.2E-23 T 13-10-2018 IPR005084 Carbohydrate binding module family 6 GO:0030246 COP00_14020 0e44c3f1075db3cd50d2204b74383604 392 PIRSF PIRSF000429 1 392 1.2E-117 T 13-10-2018 IPR002155 Thiolase GO:0016747 COP00_14020 0e44c3f1075db3cd50d2204b74383604 392 ProSitePatterns PS00737 Thiolases signature 2. 339 355 - T 13-10-2018 IPR020613 Thiolase, conserved site GO:0016747 COP00_14020 0e44c3f1075db3cd50d2204b74383604 392 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 84 102 - T 13-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 COP00_14020 0e44c3f1075db3cd50d2204b74383604 392 Gene3D G3DSA:3.40.47.10 126 390 2.4E-139 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 COP00_14020 0e44c3f1075db3cd50d2204b74383604 392 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 391 4.9E-136 T 13-10-2018 IPR002155 Thiolase GO:0016747 COP00_14020 0e44c3f1075db3cd50d2204b74383604 392 Pfam PF02803 Thiolase, C-terminal domain 270 391 7.8E-43 T 13-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 COP00_14020 0e44c3f1075db3cd50d2204b74383604 392 ProSitePatterns PS00099 Thiolases active site. 374 387 - T 13-10-2018 IPR020610 Thiolase, active site GO:0016747 COP00_14020 0e44c3f1075db3cd50d2204b74383604 392 SUPERFAMILY SSF53901 4 270 7.44E-80 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 COP00_14020 0e44c3f1075db3cd50d2204b74383604 392 Pfam PF00108 Thiolase, N-terminal domain 5 262 1.7E-93 T 13-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 COP00_14020 0e44c3f1075db3cd50d2204b74383604 392 SUPERFAMILY SSF53901 271 391 1.65E-35 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 COP00_14020 0e44c3f1075db3cd50d2204b74383604 392 Gene3D G3DSA:3.40.47.10 5 276 2.4E-139 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 COP00_04105 f5ab424bbe1f10e9bb9d45e8acc97721 139 SUPERFAMILY SSF54593 4 136 6.58E-29 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase COP00_04105 f5ab424bbe1f10e9bb9d45e8acc97721 139 Gene3D G3DSA:3.10.180.10 2 139 5.9E-51 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase COP00_04105 f5ab424bbe1f10e9bb9d45e8acc97721 139 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 130 1.0E-12 T 13-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain COP00_04750 21e50262bf6ee40285be1a0ffe2f979c 3475 Gene3D G3DSA:1.10.1200.10 2305 2389 1.7E-29 T 13-10-2018 IPR036736 ACP-like superfamily COP00_04750 21e50262bf6ee40285be1a0ffe2f979c 3475 SUPERFAMILY SSF47336 1264 1370 3.14E-19 T 13-10-2018 IPR036736 ACP-like superfamily COP00_04750 21e50262bf6ee40285be1a0ffe2f979c 3475 SUPERFAMILY SSF47336 3337 3410 9.42E-19 T 13-10-2018 IPR036736 ACP-like superfamily COP00_04750 21e50262bf6ee40285be1a0ffe2f979c 3475 SUPERFAMILY SSF56801 2810 3358 2.09E-167 T 13-10-2018 COP00_04750 21e50262bf6ee40285be1a0ffe2f979c 3475 Pfam PF00501 AMP-binding enzyme 764 1166 2.8E-107 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 COP00_04750 21e50262bf6ee40285be1a0ffe2f979c 3475 Pfam PF00501 AMP-binding enzyme 1808 2209 5.2E-100 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 COP00_04750 21e50262bf6ee40285be1a0ffe2f979c 3475 Pfam PF00501 AMP-binding enzyme 2852 3238 1.7E-100 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 COP00_04750 21e50262bf6ee40285be1a0ffe2f979c 3475 ProSitePatterns PS00455 Putative AMP-binding domain signature. 2989 3000 - T 13-10-2018 IPR020845 AMP-binding, conserved site COP00_04750 21e50262bf6ee40285be1a0ffe2f979c 3475 ProSitePatterns PS00455 Putative AMP-binding domain signature. 1947 1958 - T 13-10-2018 IPR020845 AMP-binding, conserved site COP00_04750 21e50262bf6ee40285be1a0ffe2f979c 3475 Gene3D G3DSA:3.30.559.30 492 750 7.2E-43 T 13-10-2018 COP00_04750 21e50262bf6ee40285be1a0ffe2f979c 3475 Gene3D G3DSA:3.40.50.1820 3336 3437 8.0E-26 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold COP00_04750 21e50262bf6ee40285be1a0ffe2f979c 3475 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 1829 2233 2.4E-132 T 13-10-2018 IPR010071 Amino acid adenylation domain COP00_04750 21e50262bf6ee40285be1a0ffe2f979c 3475 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 2873 3262 6.4E-131 T 13-10-2018 IPR010071 Amino acid adenylation domain COP00_04750 21e50262bf6ee40285be1a0ffe2f979c 3475 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 785 1190 5.0E-139 T 13-10-2018 IPR010071 Amino acid adenylation domain COP00_04750 21e50262bf6ee40285be1a0ffe2f979c 3475 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1296 1311 - T 13-10-2018 IPR006162 Phosphopantetheine attachment site COP00_04750 21e50262bf6ee40285be1a0ffe2f979c 3475 Gene3D G3DSA:3.30.300.30 1161 1258 5.8E-32 T 13-10-2018 COP00_04750 21e50262bf6ee40285be1a0ffe2f979c 3475 Gene3D G3DSA:3.30.300.30 2204 2304 1.3E-34 T 13-10-2018 COP00_04750 21e50262bf6ee40285be1a0ffe2f979c 3475 Gene3D G3DSA:3.30.300.30 3233 3335 1.4E-34 T 13-10-2018 COP00_04750 21e50262bf6ee40285be1a0ffe2f979c 3475 SUPERFAMILY SSF52777 233 470 1.09E-59 T 13-10-2018 COP00_04750 21e50262bf6ee40285be1a0ffe2f979c 3475 ProSitePatterns PS00455 Putative AMP-binding domain signature. 903 914 - T 13-10-2018 IPR020845 AMP-binding, conserved site COP00_04750 21e50262bf6ee40285be1a0ffe2f979c 3475 Gene3D G3DSA:3.30.559.10 46 416 9.8E-140 T 13-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 COP00_04750 21e50262bf6ee40285be1a0ffe2f979c 3475 Pfam PF00668 Condensation domain 487 744 8.8E-43 T 13-10-2018 IPR001242 Condensation domain COP00_04750 21e50262bf6ee40285be1a0ffe2f979c 3475 Pfam PF00668 Condensation domain 1355 1788 5.5E-133 T 13-10-2018 IPR001242 Condensation domain COP00_04750 21e50262bf6ee40285be1a0ffe2f979c 3475 Pfam PF00668 Condensation domain 2399 2832 4.3E-129 T 13-10-2018 IPR001242 Condensation domain COP00_04750 21e50262bf6ee40285be1a0ffe2f979c 3475 Pfam PF00668 Condensation domain 42 479 1.0E-100 T 13-10-2018 IPR001242 Condensation domain COP00_04750 21e50262bf6ee40285be1a0ffe2f979c 3475 Gene3D G3DSA:1.10.1200.10 1259 1346 1.6E-27 T 13-10-2018 IPR036736 ACP-like superfamily COP00_04750 21e50262bf6ee40285be1a0ffe2f979c 3475 SUPERFAMILY SSF47336 2308 2382 6.15E-22 T 13-10-2018 IPR036736 ACP-like superfamily COP00_04750 21e50262bf6ee40285be1a0ffe2f979c 3475 SUPERFAMILY SSF56801 735 1285 2.09E-166 T 13-10-2018 COP00_04750 21e50262bf6ee40285be1a0ffe2f979c 3475 SUPERFAMILY SSF52777 2404 2567 3.28E-42 T 13-10-2018 COP00_04750 21e50262bf6ee40285be1a0ffe2f979c 3475 Gene3D G3DSA:3.40.50.12780 753 1158 3.5E-144 T 13-10-2018 COP00_04750 21e50262bf6ee40285be1a0ffe2f979c 3475 Gene3D G3DSA:3.40.50.12780 1797 2201 2.1E-133 T 13-10-2018 COP00_04750 21e50262bf6ee40285be1a0ffe2f979c 3475 Gene3D G3DSA:3.30.559.30 2571 2816 8.2E-146 T 13-10-2018 COP00_04750 21e50262bf6ee40285be1a0ffe2f979c 3475 Gene3D G3DSA:2.30.38.10 3148 3228 4.2E-32 T 13-10-2018 COP00_04750 21e50262bf6ee40285be1a0ffe2f979c 3475 Gene3D G3DSA:3.30.559.30 1527 1771 4.5E-150 T 13-10-2018 COP00_04750 21e50262bf6ee40285be1a0ffe2f979c 3475 SUPERFAMILY SSF52777 494 733 2.11E-32 T 13-10-2018 COP00_04750 21e50262bf6ee40285be1a0ffe2f979c 3475 Gene3D G3DSA:3.40.50.980 2843 3007 6.9E-59 T 13-10-2018 COP00_04750 21e50262bf6ee40285be1a0ffe2f979c 3475 Gene3D G3DSA:3.40.50.980 3008 3144 5.9E-40 T 13-10-2018 COP00_04750 21e50262bf6ee40285be1a0ffe2f979c 3475 SUPERFAMILY SSF52777 1530 1794 1.33E-61 T 13-10-2018 COP00_04750 21e50262bf6ee40285be1a0ffe2f979c 3475 Gene3D G3DSA:3.30.559.10 1359 1717 4.5E-150 T 13-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 COP00_04750 21e50262bf6ee40285be1a0ffe2f979c 3475 SUPERFAMILY SSF56801 1767 2329 7.46E-161 T 13-10-2018 COP00_04750 21e50262bf6ee40285be1a0ffe2f979c 3475 SUPERFAMILY SSF52777 1361 1523 8.23E-42 T 13-10-2018 COP00_04750 21e50262bf6ee40285be1a0ffe2f979c 3475 Gene3D G3DSA:3.30.559.10 2404 2761 8.2E-146 T 13-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 COP00_04750 21e50262bf6ee40285be1a0ffe2f979c 3475 ProSitePatterns PS00012 Phosphopantetheine attachment site. 2340 2355 - T 13-10-2018 IPR006162 Phosphopantetheine attachment site COP00_04750 21e50262bf6ee40285be1a0ffe2f979c 3475 SUPERFAMILY SSF52777 2575 2839 1.78E-59 T 13-10-2018 COP00_04750 21e50262bf6ee40285be1a0ffe2f979c 3475 SMART SM00823 Phosphopantetheine attachment site 3345 3414 9.5E-4 T 13-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 COP00_04750 21e50262bf6ee40285be1a0ffe2f979c 3475 SMART SM00823 Phosphopantetheine attachment site 1272 1341 8.6E-6 T 13-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 COP00_04750 21e50262bf6ee40285be1a0ffe2f979c 3475 SMART SM00823 Phosphopantetheine attachment site 2316 2385 7.2E-6 T 13-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 COP00_04750 21e50262bf6ee40285be1a0ffe2f979c 3475 Pfam PF00550 Phosphopantetheine attachment site 3346 3410 6.6E-14 T 13-10-2018 IPR009081 Phosphopantetheine binding ACP domain COP00_04750 21e50262bf6ee40285be1a0ffe2f979c 3475 Pfam PF00550 Phosphopantetheine attachment site 2319 2381 1.4E-15 T 13-10-2018 IPR009081 Phosphopantetheine binding ACP domain COP00_04750 21e50262bf6ee40285be1a0ffe2f979c 3475 Pfam PF00550 Phosphopantetheine attachment site 1274 1337 7.5E-15 T 13-10-2018 IPR009081 Phosphopantetheine binding ACP domain COP00_04750 21e50262bf6ee40285be1a0ffe2f979c 3475 Pfam PF13193 AMP-binding enzyme C-terminal domain 2217 2290 2.0E-11 T 13-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain COP00_04750 21e50262bf6ee40285be1a0ffe2f979c 3475 Pfam PF13193 AMP-binding enzyme C-terminal domain 1174 1247 3.1E-9 T 13-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain COP00_04750 21e50262bf6ee40285be1a0ffe2f979c 3475 Pfam PF13193 AMP-binding enzyme C-terminal domain 3246 3319 5.5E-13 T 13-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain COP00_04750 21e50262bf6ee40285be1a0ffe2f979c 3475 SUPERFAMILY SSF52777 47 224 1.33E-46 T 13-10-2018 COP00_04750 21e50262bf6ee40285be1a0ffe2f979c 3475 Gene3D G3DSA:3.30.559.30 228 472 9.8E-140 T 13-10-2018 COP00_16535 ddd392bc198ab921ccdad5ce2483a907 810 SMART SM00382 537 681 7.4E-12 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_16535 ddd392bc198ab921ccdad5ce2483a907 810 SMART SM00382 200 344 8.9E-12 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_16535 ddd392bc198ab921ccdad5ce2483a907 810 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 648 662 1.0E-42 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 COP00_16535 ddd392bc198ab921ccdad5ce2483a907 810 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 541 559 1.0E-42 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 COP00_16535 ddd392bc198ab921ccdad5ce2483a907 810 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 586 604 1.0E-42 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 COP00_16535 ddd392bc198ab921ccdad5ce2483a907 810 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 615 633 1.0E-42 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 COP00_16535 ddd392bc198ab921ccdad5ce2483a907 810 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 295 307 - T 13-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 COP00_16535 ddd392bc198ab921ccdad5ce2483a907 810 Pfam PF07724 AAA domain (Cdc48 subfamily) 536 708 2.6E-57 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 COP00_16535 ddd392bc198ab921ccdad5ce2483a907 810 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 205 317 1.6E-13 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 COP00_16535 ddd392bc198ab921ccdad5ce2483a907 810 Gene3D G3DSA:3.40.50.300 151 343 7.1E-72 T 13-10-2018 COP00_16535 ddd392bc198ab921ccdad5ce2483a907 810 SUPERFAMILY SSF52540 486 802 2.06E-81 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_16535 ddd392bc198ab921ccdad5ce2483a907 810 Gene3D G3DSA:1.10.8.60 714 810 1.6E-28 T 13-10-2018 COP00_16535 ddd392bc198ab921ccdad5ce2483a907 810 Pfam PF02151 UvrB/uvrC motif 417 452 4.9E-7 T 13-10-2018 IPR001943 UVR domain GO:0005515 COP00_16535 ddd392bc198ab921ccdad5ce2483a907 810 Gene3D G3DSA:4.10.860.10 409 467 2.4E-54 T 13-10-2018 COP00_16535 ddd392bc198ab921ccdad5ce2483a907 810 Gene3D G3DSA:1.10.8.60 346 481 2.4E-54 T 13-10-2018 COP00_16535 ddd392bc198ab921ccdad5ce2483a907 810 Gene3D G3DSA:1.10.1780.10 1 150 3.5E-64 T 13-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 COP00_16535 ddd392bc198ab921ccdad5ce2483a907 810 SMART SM01086 714 803 1.3E-36 T 13-10-2018 IPR019489 Clp ATPase, C-terminal COP00_16535 ddd392bc198ab921ccdad5ce2483a907 810 SUPERFAMILY SSF81923 5 145 7.36E-34 T 13-10-2018 IPR036628 Clp, N-terminal domain superfamily GO:0019538 COP00_16535 ddd392bc198ab921ccdad5ce2483a907 810 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 714 793 7.8E-26 T 13-10-2018 IPR019489 Clp ATPase, C-terminal COP00_16535 ddd392bc198ab921ccdad5ce2483a907 810 Gene3D G3DSA:3.40.50.300 489 712 1.5E-90 T 13-10-2018 COP00_16535 ddd392bc198ab921ccdad5ce2483a907 810 SUPERFAMILY SSF52540 161 466 1.15E-77 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_16535 ddd392bc198ab921ccdad5ce2483a907 810 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 91 143 1.2E-18 T 13-10-2018 IPR004176 Clp, N-terminal COP00_16535 ddd392bc198ab921ccdad5ce2483a907 810 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 69 1.2E-18 T 13-10-2018 IPR004176 Clp, N-terminal COP00_16535 ddd392bc198ab921ccdad5ce2483a907 810 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 571 589 - T 13-10-2018 IPR028299 ClpA/B, conserved site 2 COP00_18705 b2edbcc966237e57451106b901415885 124 Gene3D G3DSA:1.20.1290.10 3 124 7.5E-42 T 13-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 COP00_18705 b2edbcc966237e57451106b901415885 124 SUPERFAMILY SSF69118 3 122 1.22E-33 T 13-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 COP00_18705 b2edbcc966237e57451106b901415885 124 Pfam PF02627 Carboxymuconolactone decarboxylase family 33 117 1.0E-19 T 13-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 COP00_16310 0a6ed0e0889cae95a2167fb0b5357b3e 489 Gene3D G3DSA:1.10.287.1080 356 488 1.8E-46 T 13-10-2018 COP00_16310 0a6ed0e0889cae95a2167fb0b5357b3e 489 PIRSF PIRSF002845 1 488 4.3E-226 T 13-10-2018 IPR024180 Bifunctional tetrapyrrole methylase/MazG NTP pyrophosphohydrolase, predicted COP00_16310 0a6ed0e0889cae95a2167fb0b5357b3e 489 TIGRFAM TIGR00444 mazG: MazG family protein 239 484 2.7E-111 T 13-10-2018 IPR011551 NTP pyrophosphohydrolase MazG COP00_16310 0a6ed0e0889cae95a2167fb0b5357b3e 489 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 392 453 5.1E-5 T 13-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core COP00_16310 0a6ed0e0889cae95a2167fb0b5357b3e 489 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 255 328 8.2E-29 T 13-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core COP00_16310 0a6ed0e0889cae95a2167fb0b5357b3e 489 SUPERFAMILY SSF53790 3 263 5.5E-35 T 13-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 COP00_16310 0a6ed0e0889cae95a2167fb0b5357b3e 489 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 4 206 1.3E-26 T 13-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 COP00_16310 0a6ed0e0889cae95a2167fb0b5357b3e 489 SUPERFAMILY SSF101386 231 332 7.56E-26 T 13-10-2018 COP00_16310 0a6ed0e0889cae95a2167fb0b5357b3e 489 SUPERFAMILY SSF101386 363 463 4.11E-22 T 13-10-2018 COP00_16310 0a6ed0e0889cae95a2167fb0b5357b3e 489 Gene3D G3DSA:3.40.1010.10 1 119 6.3E-12 T 13-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 COP00_16310 0a6ed0e0889cae95a2167fb0b5357b3e 489 Gene3D G3DSA:1.10.287.1080 229 353 1.9E-43 T 13-10-2018 COP00_17370 a2c2a09f59cf241cb80017c2ab469208 63 SUPERFAMILY SSF52833 4 60 3.05E-17 T 13-10-2018 IPR036249 Thioredoxin-like superfamily COP00_17370 a2c2a09f59cf241cb80017c2ab469208 63 Gene3D G3DSA:3.40.30.10 5 63 2.8E-27 T 13-10-2018 COP00_17370 a2c2a09f59cf241cb80017c2ab469208 63 Pfam PF03190 Protein of unknown function, DUF255 8 60 5.8E-27 T 13-10-2018 IPR004879 Domain of unknown function DUF255 COP00_21895 3f56ff4e882f73b7808a0bf27fae46c8 240 SUPERFAMILY SSF51695 3 235 2.72E-76 T 13-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 COP00_21895 3f56ff4e882f73b7808a0bf27fae46c8 240 Gene3D G3DSA:3.20.20.190 1 239 2.7E-81 T 13-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 COP00_21895 3f56ff4e882f73b7808a0bf27fae46c8 240 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 6 232 2.7E-45 T 13-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 COP00_13410 8bcd84d2afd1c53b8fb6274207db5b2d 489 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 COP00_13410 8bcd84d2afd1c53b8fb6274207db5b2d 489 SUPERFAMILY SSF52540 2 220 6.39E-59 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_13410 8bcd84d2afd1c53b8fb6274207db5b2d 489 Gene3D G3DSA:3.40.50.300 234 485 2.9E-43 T 13-10-2018 COP00_13410 8bcd84d2afd1c53b8fb6274207db5b2d 489 Gene3D G3DSA:3.40.50.300 1 233 2.7E-60 T 13-10-2018 COP00_13410 8bcd84d2afd1c53b8fb6274207db5b2d 489 SMART SM00382 272 466 2.9E-6 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_13410 8bcd84d2afd1c53b8fb6274207db5b2d 489 SMART SM00382 23 220 3.0E-9 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_13410 8bcd84d2afd1c53b8fb6274207db5b2d 489 Pfam PF00005 ABC transporter 14 164 8.4E-31 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 COP00_13410 8bcd84d2afd1c53b8fb6274207db5b2d 489 ProSitePatterns PS00211 ABC transporters family signature. 390 404 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 COP00_13410 8bcd84d2afd1c53b8fb6274207db5b2d 489 Pfam PF00005 ABC transporter 264 417 1.0E-19 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 COP00_13410 8bcd84d2afd1c53b8fb6274207db5b2d 489 SUPERFAMILY SSF52540 237 474 1.13E-45 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_19340 818b44d71976cb933c06e36ee67240e8 87 SUPERFAMILY SSF46689 1 85 8.06E-13 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 COP00_14160 f9a02d81a1629b074de1c79fd39beb20 254 Gene3D G3DSA:3.30.70.1030 7 143 1.2E-55 T 13-10-2018 COP00_14160 f9a02d81a1629b074de1c79fd39beb20 254 Gene3D G3DSA:3.30.70.1100 144 254 9.5E-49 T 13-10-2018 COP00_14160 f9a02d81a1629b074de1c79fd39beb20 254 Hamap MF_01442 Putative heme-dependent peroxidase . 7 254 57.261 T 13-10-2018 IPR031332 Putative heme-dependent peroxidase, UPF0447 family COP00_14160 f9a02d81a1629b074de1c79fd39beb20 254 SUPERFAMILY SSF54909 7 253 3.49E-97 T 13-10-2018 IPR011008 Dimeric alpha-beta barrel COP00_14160 f9a02d81a1629b074de1c79fd39beb20 254 Pfam PF06778 Chlorite dismutase 39 243 6.0E-78 T 13-10-2018 IPR010644 Putative heme-dependent peroxidase/Chlorite dismutase COP00_12025 8527af8890e9982f426e1c73c3b1b807 168 Pfam PF01161 Phosphatidylethanolamine-binding protein 11 163 1.8E-31 T 13-10-2018 IPR008914 Phosphatidylethanolamine-binding protein COP00_12025 8527af8890e9982f426e1c73c3b1b807 168 SUPERFAMILY SSF49777 11 162 1.44E-33 T 13-10-2018 IPR036610 PEBP-like superfamily COP00_12025 8527af8890e9982f426e1c73c3b1b807 168 Gene3D G3DSA:3.90.280.10 1 167 7.8E-43 T 13-10-2018 IPR036610 PEBP-like superfamily COP00_12025 8527af8890e9982f426e1c73c3b1b807 168 TIGRFAM TIGR00481 TIGR00481: Raf kinase inhibitor-like protein, YbhB/YbcL family 18 160 5.9E-47 T 13-10-2018 IPR005247 YbhB/YbcL COP00_09760 b5d4aa7d8ceee300137865e4e0525943 260 SMART SM00382 32 213 5.8E-17 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_09760 b5d4aa7d8ceee300137865e4e0525943 260 SUPERFAMILY SSF52540 4 218 2.42E-61 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_09760 b5d4aa7d8ceee300137865e4e0525943 260 Gene3D G3DSA:3.40.50.300 2 255 6.7E-60 T 13-10-2018 COP00_09760 b5d4aa7d8ceee300137865e4e0525943 260 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 COP00_09760 b5d4aa7d8ceee300137865e4e0525943 260 Pfam PF00005 ABC transporter 23 162 1.8E-32 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 COP00_23860 6c150ff2f787411b3dd5711e07ae603f 274 Pfam PF04951 D-aminopeptidase 1 262 6.4E-91 T 13-10-2018 IPR007035 Peptidase M55, D-aminopeptidase COP00_23860 6c150ff2f787411b3dd5711e07ae603f 274 PIRSF PIRSF015853 1 271 4.3E-106 T 13-10-2018 IPR007035 Peptidase M55, D-aminopeptidase COP00_23860 6c150ff2f787411b3dd5711e07ae603f 274 Gene3D G3DSA:3.30.1360.130 210 274 4.5E-30 T 13-10-2018 COP00_23860 6c150ff2f787411b3dd5711e07ae603f 274 SUPERFAMILY SSF63992 1 273 7.32E-101 T 13-10-2018 IPR036177 Peptidase M55, D-aminopeptidase superfamily COP00_23860 6c150ff2f787411b3dd5711e07ae603f 274 Gene3D G3DSA:3.40.50.10780 1 209 1.5E-75 T 13-10-2018 IPR027476 D-aminopeptidase, N-terminal COP00_20385 5d3e51884457642434cc95742c446251 621 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 472 597 8.6E-51 T 13-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 COP00_20385 5d3e51884457642434cc95742c446251 621 SUPERFAMILY SSF51261 466 616 6.8E-55 T 13-10-2018 IPR011055 Duplicated hybrid motif COP00_20385 5d3e51884457642434cc95742c446251 621 Gene3D G3DSA:3.30.1360.60 1 76 4.2E-22 T 13-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 COP00_20385 5d3e51884457642434cc95742c446251 621 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 19 36 - T 13-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 COP00_20385 5d3e51884457642434cc95742c446251 621 Gene3D G3DSA:2.70.70.10 463 618 1.2E-54 T 13-10-2018 IPR011055 Duplicated hybrid motif COP00_20385 5d3e51884457642434cc95742c446251 621 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 475 593 4.2E-44 T 13-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 COP00_20385 5d3e51884457642434cc95742c446251 621 Pfam PF00367 phosphotransferase system, EIIB 8 41 2.8E-13 T 13-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 COP00_20385 5d3e51884457642434cc95742c446251 621 TIGRFAM TIGR01995 PTS-II-ABC-beta: PTS system, beta-glucoside-specific IIABC component 3 616 1.3E-218 T 13-10-2018 IPR011297 Phosphotransferase system, beta-glucoside-specific IIABC component GO:0005886|GO:0008982|GO:0009401 COP00_20385 5d3e51884457642434cc95742c446251 621 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 535 547 - T 13-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 COP00_20385 5d3e51884457642434cc95742c446251 621 Pfam PF02378 Phosphotransferase system, EIIC 111 379 9.8E-27 T 13-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 COP00_20385 5d3e51884457642434cc95742c446251 621 SUPERFAMILY SSF55604 6 79 1.2E-18 T 13-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 COP00_01520 4a940853c5d8d18b25f5172547bba6c3 259 Gene3D G3DSA:3.40.1180.10 12 259 1.2E-99 T 13-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 COP00_01520 4a940853c5d8d18b25f5172547bba6c3 259 SUPERFAMILY SSF64005 28 252 1.31E-89 T 13-10-2018 IPR036424 Decaprenyl diphosphate synthase-like superfamily GO:0016765 Reactome: R-HSA-446199 COP00_01520 4a940853c5d8d18b25f5172547bba6c3 259 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 203 220 - T 13-10-2018 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199|Reactome: R-HSA-4755609 COP00_01520 4a940853c5d8d18b25f5172547bba6c3 259 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 30 258 41.018 T 13-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 COP00_01520 4a940853c5d8d18b25f5172547bba6c3 259 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 30 257 2.3E-86 T 13-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 COP00_01520 4a940853c5d8d18b25f5172547bba6c3 259 Pfam PF01255 Putative undecaprenyl diphosphate synthase 37 257 7.3E-83 T 13-10-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 COP00_08050 1381e81641ba05c3111e9c1d862c9c09 380 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 4 377 3.7E-164 T 13-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 COP00_08050 1381e81641ba05c3111e9c1d862c9c09 380 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 187 201 - T 13-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 COP00_08050 1381e81641ba05c3111e9c1d862c9c09 380 Gene3D G3DSA:3.40.640.10 2 245 2.2E-95 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 COP00_08050 1381e81641ba05c3111e9c1d862c9c09 380 Gene3D G3DSA:3.90.1150.10 246 380 9.5E-56 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 COP00_08050 1381e81641ba05c3111e9c1d862c9c09 380 SUPERFAMILY SSF53383 5 377 1.46E-125 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase COP00_08050 1381e81641ba05c3111e9c1d862c9c09 380 PIRSF PIRSF001434 1 379 1.2E-149 T 13-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 COP00_20035 d062ab09f64a2fff5f81cd7a271a4970 586 Pfam PF02903 Alpha amylase, N-terminal ig-like domain 1 125 1.2E-42 T 13-10-2018 IPR004185 Glycoside hydrolase, family 13, N-terminal Ig-like domain GO:0004553|GO:0005975 COP00_20035 d062ab09f64a2fff5f81cd7a271a4970 586 SMART SM00642 143 498 2.0E-123 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 COP00_20035 d062ab09f64a2fff5f81cd7a271a4970 586 Gene3D G3DSA:2.60.40.10 1 129 8.0E-39 T 13-10-2018 IPR013783 Immunoglobulin-like fold COP00_20035 d062ab09f64a2fff5f81cd7a271a4970 586 SUPERFAMILY SSF51445 67 504 4.8E-127 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily COP00_20035 d062ab09f64a2fff5f81cd7a271a4970 586 Gene3D G3DSA:3.20.20.80 138 499 2.0E-154 T 13-10-2018 COP00_20035 d062ab09f64a2fff5f81cd7a271a4970 586 Pfam PF00128 Alpha amylase, catalytic domain 177 470 1.9E-80 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 COP00_20035 d062ab09f64a2fff5f81cd7a271a4970 586 Gene3D G3DSA:3.90.400.10 250 300 2.0E-154 T 13-10-2018 COP00_05010 4d355da38a1de1532f72ceb253184d4d 465 Gene3D G3DSA:2.30.42.10 103 189 4.4E-98 T 13-10-2018 COP00_05010 4d355da38a1de1532f72ceb253184d4d 465 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 54 380 1.3E-120 T 13-10-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 COP00_05010 4d355da38a1de1532f72ceb253184d4d 465 Pfam PF03572 Peptidase family S41 200 361 6.8E-50 T 13-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 COP00_05010 4d355da38a1de1532f72ceb253184d4d 465 SMART SM00228 103 174 5.2E-17 T 13-10-2018 IPR001478 PDZ domain GO:0005515 COP00_05010 4d355da38a1de1532f72ceb253184d4d 465 Pfam PF01471 Putative peptidoglycan binding domain 385 435 2.8E-14 T 13-10-2018 IPR002477 Peptidoglycan binding-like COP00_05010 4d355da38a1de1532f72ceb253184d4d 465 Gene3D G3DSA:3.90.226.10 190 360 4.4E-98 T 13-10-2018 COP00_05010 4d355da38a1de1532f72ceb253184d4d 465 SMART SM00245 175 363 1.9E-77 T 13-10-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 COP00_05010 4d355da38a1de1532f72ceb253184d4d 465 Pfam PF13180 PDZ domain 104 174 2.7E-12 T 13-10-2018 IPR001478 PDZ domain GO:0005515 COP00_05010 4d355da38a1de1532f72ceb253184d4d 465 SUPERFAMILY SSF52096 43 367 4.64E-73 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily COP00_05010 4d355da38a1de1532f72ceb253184d4d 465 Gene3D G3DSA:1.10.101.10 373 444 4.4E-15 T 13-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 COP00_05010 4d355da38a1de1532f72ceb253184d4d 465 Gene3D G3DSA:3.30.750.44 50 338 4.4E-98 T 13-10-2018 COP00_05010 4d355da38a1de1532f72ceb253184d4d 465 SUPERFAMILY SSF47090 375 439 3.79E-15 T 13-10-2018 IPR036365 PGBD-like superfamily COP00_05010 4d355da38a1de1532f72ceb253184d4d 465 SUPERFAMILY SSF50156 94 175 1.16E-16 T 13-10-2018 IPR036034 PDZ superfamily GO:0005515 COP00_16215 d65f756a7fb563c81fb030fef1572802 255 PIRSF PIRSF005902 1 255 4.3E-93 T 13-10-2018 IPR001130 TatD family GO:0016788 COP00_16215 d65f756a7fb563c81fb030fef1572802 255 Gene3D G3DSA:3.20.20.140 1 255 9.8E-115 T 13-10-2018 COP00_16215 d65f756a7fb563c81fb030fef1572802 255 SUPERFAMILY SSF51556 1 254 7.23E-99 T 13-10-2018 IPR032466 Metal-dependent hydrolase COP00_16215 d65f756a7fb563c81fb030fef1572802 255 ProSitePatterns PS01090 TatD deoxyribonuclease family signature 2. 124 134 - T 13-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 COP00_16215 d65f756a7fb563c81fb030fef1572802 255 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 2 253 3.5E-104 T 13-10-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 COP00_16215 d65f756a7fb563c81fb030fef1572802 255 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 2 10 - T 13-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 COP00_16215 d65f756a7fb563c81fb030fef1572802 255 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 189 205 - T 13-10-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 COP00_16215 d65f756a7fb563c81fb030fef1572802 255 Pfam PF01026 TatD related DNase 3 252 2.4E-91 T 13-10-2018 IPR001130 TatD family GO:0016788 COP00_16250 4f2c0f8358b73d0170ac41250a7c76e2 289 Hamap MF_00061 Putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 3 279 35.806 T 13-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 COP00_16250 4f2c0f8358b73d0170ac41250a7c76e2 289 Gene3D G3DSA:3.30.230.10 1 158 1.7E-60 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup COP00_16250 4f2c0f8358b73d0170ac41250a7c76e2 289 Pfam PF08544 GHMP kinases C terminal 197 270 8.5E-9 T 13-10-2018 IPR013750 GHMP kinase, C-terminal domain COP00_16250 4f2c0f8358b73d0170ac41250a7c76e2 289 Gene3D G3DSA:3.30.70.890 162 286 3.1E-29 T 13-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily COP00_16250 4f2c0f8358b73d0170ac41250a7c76e2 289 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 2 287 2.2E-120 T 13-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 COP00_16250 4f2c0f8358b73d0170ac41250a7c76e2 289 SUPERFAMILY SSF54211 3 157 7.13E-47 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold COP00_16250 4f2c0f8358b73d0170ac41250a7c76e2 289 Pfam PF00288 GHMP kinases N terminal domain 87 144 2.0E-10 T 13-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 COP00_16250 4f2c0f8358b73d0170ac41250a7c76e2 289 SUPERFAMILY SSF55060 161 281 1.19E-30 T 13-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily COP00_16250 4f2c0f8358b73d0170ac41250a7c76e2 289 PIRSF PIRSF010376 2 288 4.7E-99 T 13-10-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 COP00_18200 961f083895ab2c4f06b3c6720d4f2da2 332 Gene3D G3DSA:1.10.3470.10 7 332 3.0E-95 T 13-10-2018 IPR037294 ABC transporter, BtuC-like COP00_18200 961f083895ab2c4f06b3c6720d4f2da2 332 Pfam PF01032 FecCD transport family 20 327 3.3E-95 T 13-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 COP00_18200 961f083895ab2c4f06b3c6720d4f2da2 332 SUPERFAMILY SSF81345 7 327 9.81E-82 T 13-10-2018 IPR037294 ABC transporter, BtuC-like COP00_17895 3d03fbeebe80e3200b2f64577717037e 571 SUPERFAMILY SSF56601 16 350 2.62E-81 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like COP00_17895 3d03fbeebe80e3200b2f64577717037e 571 Gene3D G3DSA:2.40.128.600 376 464 8.2E-10 T 13-10-2018 COP00_17895 3d03fbeebe80e3200b2f64577717037e 571 Gene3D G3DSA:3.40.710.10 11 347 6.0E-96 T 13-10-2018 COP00_17895 3d03fbeebe80e3200b2f64577717037e 571 Pfam PF11954 Domain of unknown function (DUF3471) 381 474 7.1E-13 T 13-10-2018 IPR021860 Peptidase S12, Pab87-related, C-terminal COP00_17895 3d03fbeebe80e3200b2f64577717037e 571 Pfam PF00144 Beta-lactamase 12 341 8.6E-64 T 13-10-2018 IPR001466 Beta-lactamase-related COP00_01770 2b802504ee55b97b89dc91cb7210745b 143 SUPERFAMILY SSF158622 4 123 6.28E-36 T 13-10-2018 IPR023378 YheA/YmcA-like domain superfamily COP00_01770 2b802504ee55b97b89dc91cb7210745b 143 Pfam PF06133 Control of competence regulator ComK, YlbF/YmcA 9 113 5.9E-24 T 13-10-2018 IPR010368 Control of competence regulator ComK, YlbF/YmcA COP00_01770 2b802504ee55b97b89dc91cb7210745b 143 PIRSF PIRSF021287 1 123 8.7E-54 T 13-10-2018 IPR016783 Biofilm formation YmcA COP00_01770 2b802504ee55b97b89dc91cb7210745b 143 Gene3D G3DSA:1.20.1500.10 1 124 7.5E-39 T 13-10-2018 IPR023378 YheA/YmcA-like domain superfamily COP00_07495 c8f07903227930d055e095e33628cf89 262 TIGRFAM TIGR00067 glut_race: glutamate racemase 3 249 8.1E-96 T 13-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 COP00_07495 c8f07903227930d055e095e33628cf89 262 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 67 75 - T 13-10-2018 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 COP00_07495 c8f07903227930d055e095e33628cf89 262 SUPERFAMILY SSF53681 108 247 1.13E-24 T 13-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 COP00_07495 c8f07903227930d055e095e33628cf89 262 Gene3D G3DSA:3.40.50.1860 92 205 2.1E-68 T 13-10-2018 COP00_07495 c8f07903227930d055e095e33628cf89 262 Hamap MF_00258 Glutamate racemase [murI]. 1 251 33.971 T 13-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 COP00_07495 c8f07903227930d055e095e33628cf89 262 Pfam PF01177 Asp/Glu/Hydantoin racemase 3 203 2.6E-23 T 13-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 COP00_07495 c8f07903227930d055e095e33628cf89 262 Gene3D G3DSA:3.40.50.1860 3 245 2.1E-68 T 13-10-2018 COP00_07495 c8f07903227930d055e095e33628cf89 262 SUPERFAMILY SSF53681 1 102 4.74E-34 T 13-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 COP00_13025 36a8bd34d77be93255aa142ba4cf7b93 284 PIRSF PIRSF006483 3 284 1.0E-80 T 13-10-2018 IPR003740 Uncharacterised membrane protein YitT COP00_13025 36a8bd34d77be93255aa142ba4cf7b93 284 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 16 218 9.3E-62 T 13-10-2018 IPR003740 Uncharacterised membrane protein YitT COP00_13025 36a8bd34d77be93255aa142ba4cf7b93 284 Gene3D G3DSA:3.30.70.120 195 270 1.0E-24 T 13-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal COP00_13025 36a8bd34d77be93255aa142ba4cf7b93 284 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 224 278 1.3E-19 T 13-10-2018 IPR019264 Domain of unknown function DUF2179 COP00_12730 ed04fbeea1237fe2ce95328b95f8e05b 193 SUPERFAMILY SSF52096 10 192 1.2E-72 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily COP00_12730 ed04fbeea1237fe2ce95328b95f8e05b 193 PRINTS PR00127 Clp protease catalytic subunit P signature 168 187 9.2E-54 T 13-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 COP00_12730 ed04fbeea1237fe2ce95328b95f8e05b 193 PRINTS PR00127 Clp protease catalytic subunit P signature 59 79 9.2E-54 T 13-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 COP00_12730 ed04fbeea1237fe2ce95328b95f8e05b 193 PRINTS PR00127 Clp protease catalytic subunit P signature 19 34 9.2E-54 T 13-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 COP00_12730 ed04fbeea1237fe2ce95328b95f8e05b 193 PRINTS PR00127 Clp protease catalytic subunit P signature 90 107 9.2E-54 T 13-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 COP00_12730 ed04fbeea1237fe2ce95328b95f8e05b 193 PRINTS PR00127 Clp protease catalytic subunit P signature 111 130 9.2E-54 T 13-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 COP00_12730 ed04fbeea1237fe2ce95328b95f8e05b 193 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 3 193 44.259 T 13-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 COP00_12730 ed04fbeea1237fe2ce95328b95f8e05b 193 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 1 192 2.9E-108 T 13-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 COP00_12730 ed04fbeea1237fe2ce95328b95f8e05b 193 Gene3D G3DSA:3.90.226.10 1 193 1.4E-84 T 13-10-2018 COP00_12730 ed04fbeea1237fe2ce95328b95f8e05b 193 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 112 125 - T 13-10-2018 IPR033135 ClpP, histidine active site COP00_12730 ed04fbeea1237fe2ce95328b95f8e05b 193 Pfam PF00574 Clp protease 13 192 6.2E-87 T 13-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA COP00_20775 507a5ebdfb727674d05162c12a5a38bb 441 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 205 296 2.8E-29 T 13-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 COP00_20775 507a5ebdfb727674d05162c12a5a38bb 441 PIRSF PIRSF500136 1 430 1.1E-145 T 13-10-2018 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 COP00_20775 507a5ebdfb727674d05162c12a5a38bb 441 Gene3D G3DSA:3.40.50.720 205 430 5.2E-60 T 13-10-2018 COP00_20775 507a5ebdfb727674d05162c12a5a38bb 441 SMART SM00984 321 416 3.9E-30 T 13-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 COP00_20775 507a5ebdfb727674d05162c12a5a38bb 441 SUPERFAMILY SSF52413 313 415 1.18E-23 T 13-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 COP00_20775 507a5ebdfb727674d05162c12a5a38bb 441 Gene3D G3DSA:3.40.50.720 1 201 2.5E-61 T 13-10-2018 COP00_20775 507a5ebdfb727674d05162c12a5a38bb 441 PIRSF PIRSF000124 9 426 6.7E-69 T 13-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 COP00_20775 507a5ebdfb727674d05162c12a5a38bb 441 SUPERFAMILY SSF51735 9 199 5.48E-39 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily COP00_20775 507a5ebdfb727674d05162c12a5a38bb 441 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 10 186 2.3E-42 T 13-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 COP00_20775 507a5ebdfb727674d05162c12a5a38bb 441 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 321 415 1.6E-21 T 13-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 COP00_20775 507a5ebdfb727674d05162c12a5a38bb 441 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 10 411 1.0E-136 T 13-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 COP00_20775 507a5ebdfb727674d05162c12a5a38bb 441 SUPERFAMILY SSF48179 205 297 2.04E-30 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 COP00_01425 501655beec3aed952e391224d134f107 223 Pfam PF04347 Flagellar biosynthesis protein, FliO 101 203 1.5E-12 T 13-10-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 COP00_16090 1d01d00b4e440d772d5b1b6f53e1f3d1 566 Gene3D G3DSA:1.10.8.60 8 235 6.1E-105 T 13-10-2018 COP00_16090 1d01d00b4e440d772d5b1b6f53e1f3d1 566 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 3 358 1.5E-144 T 13-10-2018 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 COP00_16090 1d01d00b4e440d772d5b1b6f53e1f3d1 566 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 239 366 6.5E-13 T 13-10-2018 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 COP00_16090 1d01d00b4e440d772d5b1b6f53e1f3d1 566 SMART SM00382 37 179 7.7E-11 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_16090 1d01d00b4e440d772d5b1b6f53e1f3d1 566 SUPERFAMILY SSF48019 244 365 2.72E-27 T 13-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 COP00_16090 1d01d00b4e440d772d5b1b6f53e1f3d1 566 Pfam PF13177 DNA polymerase III, delta subunit 20 178 1.0E-45 T 13-10-2018 COP00_16090 1d01d00b4e440d772d5b1b6f53e1f3d1 566 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 41 59 3.3E-5 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 COP00_16090 1d01d00b4e440d772d5b1b6f53e1f3d1 566 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 124 142 3.3E-5 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 COP00_16090 1d01d00b4e440d772d5b1b6f53e1f3d1 566 SUPERFAMILY SSF52540 31 222 8.82E-59 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_16090 1d01d00b4e440d772d5b1b6f53e1f3d1 566 Gene3D G3DSA:1.20.272.10 242 360 5.3E-10 T 13-10-2018 COP00_16090 1d01d00b4e440d772d5b1b6f53e1f3d1 566 Gene3D G3DSA:3.40.50.300 13 177 6.1E-105 T 13-10-2018 COP00_14320 3ce5e163636c7bf4b99693659d46b38d 90 Pfam PF05402 Coenzyme PQQ synthesis protein D (PqqD) 17 84 1.3E-6 T 13-10-2018 IPR008792 Coenzyme PQQ synthesis D COP00_03105 c2cc548e6a1181c01b78ae4aeef17555 561 Gene3D G3DSA:3.40.50.1390 22 157 2.0E-21 T 13-10-2018 COP00_03105 c2cc548e6a1181c01b78ae4aeef17555 561 SMART SM00857 24 175 4.8E-28 T 13-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 COP00_03105 c2cc548e6a1181c01b78ae4aeef17555 561 Pfam PF13408 Recombinase zinc beta ribbon domain 315 380 5.6E-9 T 13-10-2018 IPR025827 Recombinase zinc beta ribbon domain COP00_03105 c2cc548e6a1181c01b78ae4aeef17555 561 SUPERFAMILY SSF53041 23 175 7.46E-23 T 13-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 COP00_03105 c2cc548e6a1181c01b78ae4aeef17555 561 Pfam PF00239 Resolvase, N terminal domain 24 174 9.7E-23 T 13-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 COP00_03105 c2cc548e6a1181c01b78ae4aeef17555 561 ProSitePatterns PS00397 Site-specific recombinases active site. 27 35 - T 13-10-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 COP00_03105 c2cc548e6a1181c01b78ae4aeef17555 561 Pfam PF07508 Recombinase 197 302 1.7E-15 T 13-10-2018 IPR011109 DNA-binding recombinase domain GO:0000150|GO:0003677 COP00_03105 c2cc548e6a1181c01b78ae4aeef17555 561 Gene3D G3DSA:1.10.10.2600 161 279 1.2E-5 T 13-10-2018 IPR038109 DNA-binding recombinase domain superfamily COP00_16055 56b151cfc7d59db5adcb14f3f54c680d 187 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 6.7E-7 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 COP00_16055 56b151cfc7d59db5adcb14f3f54c680d 187 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 6.7E-7 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 COP00_16055 56b151cfc7d59db5adcb14f3f54c680d 187 Gene3D G3DSA:1.10.357.10 1 175 7.1E-46 T 13-10-2018 COP00_16055 56b151cfc7d59db5adcb14f3f54c680d 187 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 57 4.6E-11 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 COP00_16055 56b151cfc7d59db5adcb14f3f54c680d 187 Pfam PF14278 Transcriptional regulator C-terminal region 85 157 2.8E-14 T 13-10-2018 IPR039532 Transcriptional regulator TetR, C-terminal, Firmicutes type COP00_16055 56b151cfc7d59db5adcb14f3f54c680d 187 SUPERFAMILY SSF46689 2 68 9.75E-19 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 COP00_13515 18c3e25ca9a2b19f887b0650094bf4aa 290 Pfam PF08282 haloacid dehalogenase-like hydrolase 4 281 2.9E-66 T 13-10-2018 COP00_13515 18c3e25ca9a2b19f887b0650094bf4aa 290 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 3 281 3.9E-63 T 13-10-2018 IPR000150 Cof family GO:0016787 COP00_13515 18c3e25ca9a2b19f887b0650094bf4aa 290 SUPERFAMILY SSF56784 2 285 8.7E-69 T 13-10-2018 IPR036412 HAD-like superfamily COP00_13515 18c3e25ca9a2b19f887b0650094bf4aa 290 Gene3D G3DSA:3.30.1240.10 81 210 8.7E-98 T 13-10-2018 COP00_13515 18c3e25ca9a2b19f887b0650094bf4aa 290 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 3 254 3.0E-27 T 13-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 COP00_13515 18c3e25ca9a2b19f887b0650094bf4aa 290 Gene3D G3DSA:3.40.50.1000 2 278 8.7E-98 T 13-10-2018 IPR023214 HAD superfamily COP00_09750 c8935564b78d1eaf524245625bc7f4dd 257 ProSitePatterns PS00708 Prolyl endopeptidase family serine active site. 97 127 - T 13-10-2018 IPR002471 Peptidase S9, serine active site GO:0004252|GO:0006508 COP00_09750 c8935564b78d1eaf524245625bc7f4dd 257 Pfam PF00326 Prolyl oligopeptidase family 64 255 4.2E-20 T 13-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 COP00_09750 c8935564b78d1eaf524245625bc7f4dd 257 SUPERFAMILY SSF53474 15 255 7.28E-43 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold COP00_09750 c8935564b78d1eaf524245625bc7f4dd 257 Gene3D G3DSA:3.40.50.1820 19 257 3.7E-39 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold COP00_01685 a3aee3c07cc2601a3054b58f59976f59 406 Pfam PF07690 Major Facilitator Superfamily 18 278 1.6E-43 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 COP00_01685 a3aee3c07cc2601a3054b58f59976f59 406 Gene3D G3DSA:1.20.1250.20 4 400 2.3E-68 T 13-10-2018 COP00_01685 a3aee3c07cc2601a3054b58f59976f59 406 PRINTS PR01035 Tetracycline resistance protein signature 139 161 4.2E-8 T 13-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 COP00_01685 a3aee3c07cc2601a3054b58f59976f59 406 PRINTS PR01035 Tetracycline resistance protein signature 167 187 4.2E-8 T 13-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 COP00_01685 a3aee3c07cc2601a3054b58f59976f59 406 PRINTS PR01035 Tetracycline resistance protein signature 305 325 4.2E-8 T 13-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 COP00_01685 a3aee3c07cc2601a3054b58f59976f59 406 PRINTS PR01035 Tetracycline resistance protein signature 19 35 4.2E-8 T 13-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 COP00_01685 a3aee3c07cc2601a3054b58f59976f59 406 SUPERFAMILY SSF103473 8 397 7.98E-70 T 13-10-2018 IPR036259 MFS transporter superfamily COP00_16700 2192d4fe83da875f969baa72e1ce5fbb 92 SUPERFAMILY SSF54570 3 84 9.94E-36 T 13-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 COP00_16700 2192d4fe83da875f969baa72e1ce5fbb 92 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 25.724 T 13-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 COP00_16700 2192d4fe83da875f969baa72e1ce5fbb 92 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 13-10-2018 IPR020934 Ribosomal protein S19 conserved site GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 COP00_16700 2192d4fe83da875f969baa72e1ce5fbb 92 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 92 1.6E-48 T 13-10-2018 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 COP00_16700 2192d4fe83da875f969baa72e1ce5fbb 92 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 1.6E-24 T 13-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 COP00_16700 2192d4fe83da875f969baa72e1ce5fbb 92 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 1.6E-24 T 13-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 COP00_16700 2192d4fe83da875f969baa72e1ce5fbb 92 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 1.6E-24 T 13-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 COP00_16700 2192d4fe83da875f969baa72e1ce5fbb 92 Gene3D G3DSA:3.30.860.10 1 92 4.2E-41 T 13-10-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 COP00_16700 2192d4fe83da875f969baa72e1ce5fbb 92 Pfam PF00203 Ribosomal protein S19 3 83 1.3E-36 T 13-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 COP00_16700 2192d4fe83da875f969baa72e1ce5fbb 92 PIRSF PIRSF002144 1 92 6.3E-33 T 13-10-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 COP00_09335 0d19e595c2605f02052354d7b2efd4a5 210 Gene3D G3DSA:3.40.630.30 1 210 3.0E-88 T 13-10-2018 COP00_09335 0d19e595c2605f02052354d7b2efd4a5 210 SUPERFAMILY SSF55729 44 121 1.22E-7 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase COP00_09335 0d19e595c2605f02052354d7b2efd4a5 210 PIRSF PIRSF021278 2 210 6.3E-87 T 13-10-2018 IPR024699 Acetoin utilization protein AcuA GO:0019152|GO:0045150 COP00_09335 0d19e595c2605f02052354d7b2efd4a5 210 Pfam PF00583 Acetyltransferase (GNAT) family 46 118 4.0E-5 T 13-10-2018 IPR000182 GNAT domain COP00_15790 cc725ccd9a0aa4141b7b6845fa6b7200 243 Pfam PF07702 UTRA domain 94 233 5.1E-44 T 13-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 COP00_15790 cc725ccd9a0aa4141b7b6845fa6b7200 243 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 33 47 3.8E-10 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 COP00_15790 cc725ccd9a0aa4141b7b6845fa6b7200 243 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 47 63 3.8E-10 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 COP00_15790 cc725ccd9a0aa4141b7b6845fa6b7200 243 Gene3D G3DSA:1.10.10.10 8 76 5.9E-27 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_15790 cc725ccd9a0aa4141b7b6845fa6b7200 243 SMART SM00866 94 233 4.1E-45 T 13-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 COP00_15790 cc725ccd9a0aa4141b7b6845fa6b7200 243 SUPERFAMILY SSF64288 61 240 5.97E-58 T 13-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily COP00_15790 cc725ccd9a0aa4141b7b6845fa6b7200 243 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 73 3.4E-19 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 COP00_15790 cc725ccd9a0aa4141b7b6845fa6b7200 243 Gene3D G3DSA:3.40.1410.10 77 242 3.6E-60 T 13-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily COP00_15790 cc725ccd9a0aa4141b7b6845fa6b7200 243 SUPERFAMILY SSF46785 2 85 3.57E-22 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_15790 cc725ccd9a0aa4141b7b6845fa6b7200 243 SMART SM00345 14 73 4.6E-19 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 COP00_01450 bc2bdd1ba805fcce54182be8057be66a 678 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 22 35 1.3E-53 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 COP00_01450 bc2bdd1ba805fcce54182be8057be66a 678 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 59 78 1.3E-53 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 COP00_01450 bc2bdd1ba805fcce54182be8057be66a 678 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 221 235 1.3E-53 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 COP00_01450 bc2bdd1ba805fcce54182be8057be66a 678 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 121 137 1.3E-53 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 COP00_01450 bc2bdd1ba805fcce54182be8057be66a 678 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 140 158 1.3E-53 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 COP00_01450 bc2bdd1ba805fcce54182be8057be66a 678 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 170 187 1.3E-53 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 COP00_01450 bc2bdd1ba805fcce54182be8057be66a 678 Pfam PF00771 FHIPEP family 15 667 7.7E-276 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 COP00_01450 bc2bdd1ba805fcce54182be8057be66a 678 Gene3D G3DSA:3.40.30.60 342 485 2.9E-55 T 13-10-2018 COP00_01450 bc2bdd1ba805fcce54182be8057be66a 678 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 4 675 1.1E-283 T 13-10-2018 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 COP00_01450 bc2bdd1ba805fcce54182be8057be66a 678 Gene3D G3DSA:1.10.8.540 486 575 1.8E-32 T 13-10-2018 COP00_01450 bc2bdd1ba805fcce54182be8057be66a 678 Gene3D G3DSA:1.10.490.80 577 675 1.9E-28 T 13-10-2018 COP00_01450 bc2bdd1ba805fcce54182be8057be66a 678 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 126 149 - T 13-10-2018 IPR025505 FHIPEP conserved site COP00_01450 bc2bdd1ba805fcce54182be8057be66a 678 PIRSF PIRSF005419 1 678 1.1E-261 T 13-10-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 COP00_08195 70abe331dadeb2773a67b247c33246a4 138 Gene3D G3DSA:1.10.10.10 1 138 1.0E-50 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_08195 70abe331dadeb2773a67b247c33246a4 138 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 13-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site COP00_08195 70abe331dadeb2773a67b247c33246a4 138 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 2 124 2.5E-33 T 13-10-2018 IPR000944 Transcription regulator Rrf2-type COP00_08195 70abe331dadeb2773a67b247c33246a4 138 SUPERFAMILY SSF46785 2 125 7.39E-32 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_08195 70abe331dadeb2773a67b247c33246a4 138 Pfam PF02082 Transcriptional regulator 1 82 5.9E-26 T 13-10-2018 IPR000944 Transcription regulator Rrf2-type COP00_05985 5ed93bd3909982cb0564a207e32acf35 362 Pfam PF01872 RibD C-terminal domain 147 354 1.3E-53 T 13-10-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 COP00_05985 5ed93bd3909982cb0564a207e32acf35 362 Gene3D G3DSA:3.40.140.10 1 135 2.0E-47 T 13-10-2018 COP00_05985 5ed93bd3909982cb0564a207e32acf35 362 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 3 99 1.5E-20 T 13-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain COP00_05985 5ed93bd3909982cb0564a207e32acf35 362 SUPERFAMILY SSF53927 3 145 1.0E-47 T 13-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 COP00_05985 5ed93bd3909982cb0564a207e32acf35 362 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 50 88 - T 13-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 COP00_05985 5ed93bd3909982cb0564a207e32acf35 362 Gene3D G3DSA:3.40.430.10 136 362 6.0E-75 T 13-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 COP00_05985 5ed93bd3909982cb0564a207e32acf35 362 PIRSF PIRSF006769 1 361 1.3E-128 T 13-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 COP00_05985 5ed93bd3909982cb0564a207e32acf35 362 SUPERFAMILY SSF53597 144 355 7.29E-59 T 13-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 COP00_05985 5ed93bd3909982cb0564a207e32acf35 362 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 7 355 6.1E-135 T 13-10-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-7991 COP00_05985 5ed93bd3909982cb0564a207e32acf35 362 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 146 358 8.1E-74 T 13-10-2018 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 COP00_13450 b6a17a0f7184451068b47c26f2f29f5b 199 SUPERFAMILY SSF55469 4 198 8.51E-73 T 13-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 COP00_13450 b6a17a0f7184451068b47c26f2f29f5b 199 Pfam PF00881 Nitroreductase family 9 178 2.7E-18 T 13-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 COP00_13450 b6a17a0f7184451068b47c26f2f29f5b 199 Gene3D G3DSA:3.40.109.10 3 199 1.1E-90 T 13-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 COP00_09890 24039a9d562e34cb8db26c6082660f26 478 Hamap MF_00731 2-succinylbenzoate--CoA ligase [menE]. 5 478 48.183 T 13-10-2018 IPR010192 2-succinylbenzoate--CoA ligase GO:0005524|GO:0008756|GO:0009234 KEGG: 00130+6.2.1.26|MetaCyc: PWY-5837 COP00_09890 24039a9d562e34cb8db26c6082660f26 478 TIGRFAM TIGR01923 menE: O-succinylbenzoate-CoA ligase 30 478 3.7E-162 T 13-10-2018 IPR010192 2-succinylbenzoate--CoA ligase GO:0005524|GO:0008756|GO:0009234 KEGG: 00130+6.2.1.26|MetaCyc: PWY-5837 COP00_09890 24039a9d562e34cb8db26c6082660f26 478 SUPERFAMILY SSF56801 6 478 6.02E-140 T 13-10-2018 COP00_09890 24039a9d562e34cb8db26c6082660f26 478 Pfam PF13193 AMP-binding enzyme C-terminal domain 399 472 1.3E-18 T 13-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain COP00_09890 24039a9d562e34cb8db26c6082660f26 478 Gene3D G3DSA:3.40.50.12780 1 387 3.4E-138 T 13-10-2018 COP00_09890 24039a9d562e34cb8db26c6082660f26 478 Pfam PF00501 AMP-binding enzyme 10 390 8.1E-96 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 COP00_09890 24039a9d562e34cb8db26c6082660f26 478 ProSitePatterns PS00455 Putative AMP-binding domain signature. 150 161 - T 13-10-2018 IPR020845 AMP-binding, conserved site COP00_09890 24039a9d562e34cb8db26c6082660f26 478 Gene3D G3DSA:3.30.300.310 388 478 2.7E-29 T 13-10-2018 COP00_00390 3252cf08fa93470ac180a90c25163753 430 Gene3D G3DSA:3.90.105.10 28 183 2.1E-103 T 13-10-2018 COP00_00390 3252cf08fa93470ac180a90c25163753 430 Pfam PF03454 MoeA C-terminal region (domain IV) 341 410 7.2E-18 T 13-10-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 COP00_00390 3252cf08fa93470ac180a90c25163753 430 SUPERFAMILY SSF63882 8 185 1.06E-52 T 13-10-2018 IPR036135 MoeA, N-terminal and linker domain superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 COP00_00390 3252cf08fa93470ac180a90c25163753 430 Gene3D G3DSA:2.40.340.10 336 411 6.6E-14 T 13-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 COP00_00390 3252cf08fa93470ac180a90c25163753 430 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 186 323 9.1E-34 T 13-10-2018 IPR001453 MoaB/Mog domain COP00_00390 3252cf08fa93470ac180a90c25163753 430 Pfam PF00994 Probable molybdopterin binding domain 189 326 3.2E-26 T 13-10-2018 IPR001453 MoaB/Mog domain COP00_00390 3252cf08fa93470ac180a90c25163753 430 SUPERFAMILY SSF63867 341 412 4.06E-17 T 13-10-2018 IPR036688 MoeA, C-terminal, domain IV superfamily GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 COP00_00390 3252cf08fa93470ac180a90c25163753 430 Pfam PF03453 MoeA N-terminal region (domain I and II) 9 176 9.8E-43 T 13-10-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 COP00_00390 3252cf08fa93470ac180a90c25163753 430 Gene3D G3DSA:3.40.980.10 184 326 2.1E-103 T 13-10-2018 IPR036425 MoaB/Mog-like domain superfamily COP00_00390 3252cf08fa93470ac180a90c25163753 430 Gene3D G3DSA:2.170.190.11 50 150 2.1E-103 T 13-10-2018 COP00_00390 3252cf08fa93470ac180a90c25163753 430 SMART SM00852 189 327 2.3E-37 T 13-10-2018 IPR001453 MoaB/Mog domain COP00_00390 3252cf08fa93470ac180a90c25163753 430 SUPERFAMILY SSF53218 186 328 1.7E-38 T 13-10-2018 IPR036425 MoaB/Mog-like domain superfamily COP00_08855 d808ccd456cab55b0f0dc1d82707208d 804 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 803 3.6E-273 T 13-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 COP00_08855 d808ccd456cab55b0f0dc1d82707208d 804 SUPERFAMILY SSF46955 411 483 9.16E-22 T 13-10-2018 IPR009061 Putative DNA-binding domain superfamily COP00_08855 d808ccd456cab55b0f0dc1d82707208d 804 SUPERFAMILY SSF54991 705 803 1.57E-33 T 13-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 COP00_08855 d808ccd456cab55b0f0dc1d82707208d 804 Pfam PF03147 Ferredoxin-fold anticodon binding domain 710 803 1.8E-30 T 13-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 COP00_08855 d808ccd456cab55b0f0dc1d82707208d 804 SUPERFAMILY SSF50249 36 199 7.1E-46 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold COP00_08855 d808ccd456cab55b0f0dc1d82707208d 804 Gene3D G3DSA:2.40.50.140 40 161 1.3E-67 T 13-10-2018 COP00_08855 d808ccd456cab55b0f0dc1d82707208d 804 SMART SM00873 221 394 2.2E-88 T 13-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 COP00_08855 d808ccd456cab55b0f0dc1d82707208d 804 Gene3D G3DSA:3.30.930.10 495 698 3.8E-62 T 13-10-2018 COP00_08855 d808ccd456cab55b0f0dc1d82707208d 804 Gene3D G3DSA:3.30.56.10 4 189 1.3E-67 T 13-10-2018 COP00_08855 d808ccd456cab55b0f0dc1d82707208d 804 SUPERFAMILY SSF56037 209 406 1.33E-69 T 13-10-2018 COP00_08855 d808ccd456cab55b0f0dc1d82707208d 804 SUPERFAMILY SSF55681 475 697 2.44E-53 T 13-10-2018 COP00_08855 d808ccd456cab55b0f0dc1d82707208d 804 SMART SM00874 411 479 4.2E-34 T 13-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 COP00_08855 d808ccd456cab55b0f0dc1d82707208d 804 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 797 47.688 T 13-10-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 COP00_08855 d808ccd456cab55b0f0dc1d82707208d 804 Pfam PF03484 tRNA synthetase B5 domain 414 479 6.1E-22 T 13-10-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 COP00_08855 d808ccd456cab55b0f0dc1d82707208d 804 Gene3D G3DSA:3.30.56.10 410 483 3.6E-28 T 13-10-2018 COP00_08855 d808ccd456cab55b0f0dc1d82707208d 804 Gene3D G3DSA:3.30.70.380 711 803 1.3E-32 T 13-10-2018 IPR036690 Ferrodoxin-fold anticodon-binding domain superfamily KEGG: 00970+6.1.1.20 COP00_08855 d808ccd456cab55b0f0dc1d82707208d 804 Pfam PF03483 B3/4 domain 222 394 6.2E-64 T 13-10-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 COP00_08855 d808ccd456cab55b0f0dc1d82707208d 804 Pfam PF01588 Putative tRNA binding domain 46 152 3.6E-27 T 13-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 COP00_08855 d808ccd456cab55b0f0dc1d82707208d 804 SMART SM00896 710 803 6.2E-48 T 13-10-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 COP00_08855 d808ccd456cab55b0f0dc1d82707208d 804 Gene3D G3DSA:3.50.40.10 204 405 5.3E-80 T 13-10-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 KEGG: 00970+6.1.1.20 COP00_08880 96d48bc73bc54961e12f45d2047f8629 197 Gene3D G3DSA:1.10.10.60 2 54 2.6E-14 T 13-10-2018 COP00_08880 96d48bc73bc54961e12f45d2047f8629 197 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 58 2.6E-11 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 COP00_08880 96d48bc73bc54961e12f45d2047f8629 197 ProSitePatterns PS01081 TetR-type HTH domain signature. 24 55 - T 13-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site COP00_08880 96d48bc73bc54961e12f45d2047f8629 197 Gene3D G3DSA:1.10.357.10 55 193 3.8E-14 T 13-10-2018 COP00_08880 96d48bc73bc54961e12f45d2047f8629 197 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 2.9E-8 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 COP00_08880 96d48bc73bc54961e12f45d2047f8629 197 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 2.9E-8 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 COP00_08880 96d48bc73bc54961e12f45d2047f8629 197 SUPERFAMILY SSF46689 3 80 3.9E-16 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 COP00_22320 0648c197f0a4ac60fcbd0e0ca7d3f37a 190 SMART SM00855 3 146 1.1E-25 T 13-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 COP00_22320 0648c197f0a4ac60fcbd0e0ca7d3f37a 190 PIRSF PIRSF000709 2 187 1.8E-10 T 13-10-2018 COP00_22320 0648c197f0a4ac60fcbd0e0ca7d3f37a 190 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 183 5.5E-53 T 13-10-2018 IPR013078 Histidine phosphatase superfamily, clade-1 COP00_22320 0648c197f0a4ac60fcbd0e0ca7d3f37a 190 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 6 15 - T 13-10-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824 COP00_22320 0648c197f0a4ac60fcbd0e0ca7d3f37a 190 Gene3D G3DSA:3.40.50.1240 1 190 3.9E-56 T 13-10-2018 IPR029033 Histidine phosphatase superfamily COP00_22320 0648c197f0a4ac60fcbd0e0ca7d3f37a 190 SUPERFAMILY SSF53254 1 188 3.4E-57 T 13-10-2018 IPR029033 Histidine phosphatase superfamily COP00_01675 aee9f51d211fd76731e0131263d91ddd 777 Gene3D G3DSA:1.10.10.10 709 771 3.4E-27 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_01675 aee9f51d211fd76731e0131263d91ddd 777 SUPERFAMILY SSF52540 387 682 9.03E-48 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_01675 aee9f51d211fd76731e0131263d91ddd 777 Pfam PF01580 FtsK/SpoIIIE family 414 610 1.5E-64 T 13-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 COP00_01675 aee9f51d211fd76731e0131263d91ddd 777 SMART SM00382 449 631 1.8E-4 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_01675 aee9f51d211fd76731e0131263d91ddd 777 SUPERFAMILY SSF46785 707 772 9.52E-23 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_01675 aee9f51d211fd76731e0131263d91ddd 777 Gene3D G3DSA:3.30.980.40 306 409 1.7E-38 T 13-10-2018 COP00_01675 aee9f51d211fd76731e0131263d91ddd 777 Gene3D G3DSA:3.40.50.300 411 696 7.4E-111 T 13-10-2018 COP00_01675 aee9f51d211fd76731e0131263d91ddd 777 SMART SM00843 705 770 1.7E-40 T 13-10-2018 IPR018541 FtsK gamma domain COP00_01675 aee9f51d211fd76731e0131263d91ddd 777 Pfam PF09397 Ftsk gamma domain 708 767 1.6E-29 T 13-10-2018 IPR018541 FtsK gamma domain COP00_18505 d94151b58e4bc3ab8ecd4b9dbf1022eb 691 Pfam PF08532 Beta-galactosidase trimerisation domain 406 617 1.1E-73 T 13-10-2018 IPR013738 Beta-galactosidase trimerisation GO:0004565|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 COP00_18505 d94151b58e4bc3ab8ecd4b9dbf1022eb 691 SUPERFAMILY SSF51445 7 375 1.32E-118 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily COP00_18505 d94151b58e4bc3ab8ecd4b9dbf1022eb 691 Gene3D G3DSA:2.60.40.1180 626 689 2.7E-24 T 13-10-2018 IPR013780 Glycosyl hydrolase, all-beta COP00_18505 d94151b58e4bc3ab8ecd4b9dbf1022eb 691 Gene3D G3DSA:3.40.50.880 403 625 2.4E-69 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like COP00_18505 d94151b58e4bc3ab8ecd4b9dbf1022eb 691 Gene3D G3DSA:3.20.20.80 4 401 4.2E-136 T 13-10-2018 COP00_18505 d94151b58e4bc3ab8ecd4b9dbf1022eb 691 Pfam PF02449 Beta-galactosidase 20 395 1.3E-152 T 13-10-2018 IPR013529 Glycoside hydrolase, family 42, N-terminal GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 COP00_18505 d94151b58e4bc3ab8ecd4b9dbf1022eb 691 PIRSF PIRSF001084 7 687 5.2E-257 T 13-10-2018 IPR003476 Glycoside hydrolase, family 42 GO:0004565|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 COP00_18505 d94151b58e4bc3ab8ecd4b9dbf1022eb 691 Pfam PF08533 Beta-galactosidase C-terminal domain 628 686 1.8E-12 T 13-10-2018 IPR013739 Beta-galactosidase C-terminal GO:0004565|GO:0006012 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 COP00_18505 d94151b58e4bc3ab8ecd4b9dbf1022eb 691 SUPERFAMILY SSF51011 619 686 5.34E-5 T 13-10-2018 COP00_18505 d94151b58e4bc3ab8ecd4b9dbf1022eb 691 SUPERFAMILY SSF52317 403 617 1.48E-62 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like COP00_13970 09fa01361c7178254f1c14eeaa31bd50 211 Hamap MF_00494 Probable transaldolase [tal]. 1 210 46.196 T 13-10-2018 IPR022999 Transaldolase type 3B, putative GO:0004801 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 COP00_13970 09fa01361c7178254f1c14eeaa31bd50 211 ProSitePatterns PS00958 Transaldolase active site. 80 97 - T 13-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 COP00_13970 09fa01361c7178254f1c14eeaa31bd50 211 Gene3D G3DSA:3.20.20.70 1 211 1.1E-91 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 COP00_13970 09fa01361c7178254f1c14eeaa31bd50 211 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 3 202 2.5E-56 T 13-10-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 COP00_13970 09fa01361c7178254f1c14eeaa31bd50 211 TIGRFAM TIGR00875 fsa_talC_mipB: fructose-6-phosphate aldolase 1 211 1.0E-107 T 13-10-2018 IPR004731 Transaldolase type 3B/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 COP00_13970 09fa01361c7178254f1c14eeaa31bd50 211 SUPERFAMILY SSF51569 1 211 3.45E-77 T 13-10-2018 COP00_13970 09fa01361c7178254f1c14eeaa31bd50 211 ProSitePatterns PS01054 Transaldolase signature 1. 24 32 - T 13-10-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-6791055|Reactome: R-HSA-6791462|Reactome: R-HSA-71336|Reactome: R-HSA-8950505 COP00_08555 a9dcc9df2bcbfb6b370e99812be0abc3 453 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 171 306 1.9E-45 T 13-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase COP00_08555 a9dcc9df2bcbfb6b370e99812be0abc3 453 Gene3D G3DSA:3.30.460.30 1 158 3.0E-53 T 13-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 COP00_08555 a9dcc9df2bcbfb6b370e99812be0abc3 453 SUPERFAMILY SSF69075 318 420 1.96E-16 T 13-10-2018 IPR036453 Glutamyl tRNA-reductase dimerization domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 COP00_08555 a9dcc9df2bcbfb6b370e99812be0abc3 453 PIRSF PIRSF000445 1 434 1.3E-154 T 13-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 COP00_08555 a9dcc9df2bcbfb6b370e99812be0abc3 453 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 417 29.758 T 13-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 COP00_08555 a9dcc9df2bcbfb6b370e99812be0abc3 453 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 6 156 1.4E-44 T 13-10-2018 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 COP00_08555 a9dcc9df2bcbfb6b370e99812be0abc3 453 Gene3D G3DSA:3.40.50.720 161 313 6.2E-46 T 13-10-2018 COP00_08555 a9dcc9df2bcbfb6b370e99812be0abc3 453 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 99 122 - T 13-10-2018 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 COP00_08555 a9dcc9df2bcbfb6b370e99812be0abc3 453 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 3 420 4.9E-163 T 13-10-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 COP00_08555 a9dcc9df2bcbfb6b370e99812be0abc3 453 SUPERFAMILY SSF51735 162 315 5.8E-38 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily COP00_08555 a9dcc9df2bcbfb6b370e99812be0abc3 453 SUPERFAMILY SSF69742 1 158 3.53E-46 T 13-10-2018 IPR036343 Glutamyl-tRNA reductase, N-terminal domain superfamily GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 COP00_08555 a9dcc9df2bcbfb6b370e99812be0abc3 453 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 320 418 1.1E-20 T 13-10-2018 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 COP00_08520 99136d8d410540ec160b0ff24477b1a5 195 SUPERFAMILY SSF54106 143 188 4.19E-7 T 13-10-2018 COP00_08520 99136d8d410540ec160b0ff24477b1a5 195 Pfam PF01476 LysM domain 146 188 2.6E-7 T 13-10-2018 IPR018392 LysM domain COP00_08520 99136d8d410540ec160b0ff24477b1a5 195 SMART SM00257 144 188 9.9E-6 T 13-10-2018 IPR018392 LysM domain COP00_08520 99136d8d410540ec160b0ff24477b1a5 195 Gene3D G3DSA:3.10.350.10 137 195 1.5E-8 T 13-10-2018 IPR036779 LysM domain superfamily COP00_14470 8f59baca83fc2d5d14e228190d06ec49 443 Pfam PF07690 Major Facilitator Superfamily 21 389 8.3E-63 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 COP00_14470 8f59baca83fc2d5d14e228190d06ec49 443 TIGRFAM TIGR00893 2A0114: D-galactonate transporter 23 423 5.7E-130 T 13-10-2018 COP00_14470 8f59baca83fc2d5d14e228190d06ec49 443 Gene3D G3DSA:1.20.1250.20 230 430 1.3E-30 T 13-10-2018 COP00_14470 8f59baca83fc2d5d14e228190d06ec49 443 SUPERFAMILY SSF103473 5 433 4.05E-86 T 13-10-2018 IPR036259 MFS transporter superfamily COP00_14470 8f59baca83fc2d5d14e228190d06ec49 443 PIRSF PIRSF002808 1 440 2.1E-42 T 13-10-2018 IPR000849 Sugar phosphate transporter GO:0016021|GO:0022857|GO:0055085 COP00_14470 8f59baca83fc2d5d14e228190d06ec49 443 Gene3D G3DSA:1.20.1250.20 6 204 8.1E-50 T 13-10-2018 COP00_16820 f29290af64fa2a6ba95d90530946dec6 314 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 1 313 37.622 T 13-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 COP00_16820 f29290af64fa2a6ba95d90530946dec6 314 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 59 152 1.3E-24 T 13-10-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 COP00_16820 f29290af64fa2a6ba95d90530946dec6 314 Gene3D G3DSA:3.30.1360.10 17 221 3.9E-90 T 13-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 COP00_16820 f29290af64fa2a6ba95d90530946dec6 314 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 240 305 1.9E-29 T 13-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 COP00_16820 f29290af64fa2a6ba95d90530946dec6 314 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 253 310 1.0E-25 T 13-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 COP00_16820 f29290af64fa2a6ba95d90530946dec6 314 SUPERFAMILY SSF47789 247 313 7.85E-25 T 13-10-2018 COP00_16820 f29290af64fa2a6ba95d90530946dec6 314 SMART SM00662 20 227 2.5E-105 T 13-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 COP00_16820 f29290af64fa2a6ba95d90530946dec6 314 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 26 221 1.8E-23 T 13-10-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 COP00_16820 f29290af64fa2a6ba95d90530946dec6 314 Gene3D G3DSA:1.10.150.20 237 314 1.5E-34 T 13-10-2018 COP00_16820 f29290af64fa2a6ba95d90530946dec6 314 SUPERFAMILY SSF55257 5 230 6.02E-32 T 13-10-2018 IPR036603 RNA polymerase, RBP11-like subunit GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 COP00_16820 f29290af64fa2a6ba95d90530946dec6 314 SUPERFAMILY SSF56553 50 171 2.35E-44 T 13-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 COP00_16820 f29290af64fa2a6ba95d90530946dec6 314 Gene3D G3DSA:2.170.120.12 50 170 3.9E-90 T 13-10-2018 IPR036643 DNA-directed RNA polymerase, insert domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 COP00_16820 f29290af64fa2a6ba95d90530946dec6 314 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 20 313 1.6E-126 T 13-10-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 COP00_19345 e488220a5283854ac23dba3919c190cc 165 SUPERFAMILY SSF88946 21 90 4.32E-15 T 13-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 COP00_19345 e488220a5283854ac23dba3919c190cc 165 Pfam PF04542 Sigma-70 region 2 22 80 2.0E-11 T 13-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 COP00_19345 e488220a5283854ac23dba3919c190cc 165 SUPERFAMILY SSF88659 100 159 2.62E-15 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like COP00_19345 e488220a5283854ac23dba3919c190cc 165 Pfam PF08281 Sigma-70, region 4 104 154 2.3E-15 T 13-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 COP00_19345 e488220a5283854ac23dba3919c190cc 165 Gene3D G3DSA:1.10.1740.10 3 81 6.5E-17 T 13-10-2018 COP00_19345 e488220a5283854ac23dba3919c190cc 165 Gene3D G3DSA:1.10.10.10 97 161 2.8E-18 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_19345 e488220a5283854ac23dba3919c190cc 165 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 13 158 1.6E-24 T 13-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 COP00_22370 36c34f6e9e9ada55ca98d719cd893f64 535 SUPERFAMILY SSF52743 111 377 3.01E-86 T 13-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 COP00_22370 36c34f6e9e9ada55ca98d719cd893f64 535 Gene3D G3DSA:1.10.10.1270 379 430 1.8E-5 T 13-10-2018 COP00_22370 36c34f6e9e9ada55ca98d719cd893f64 535 Gene3D G3DSA:1.10.10.1270 431 485 2.1E-11 T 13-10-2018 COP00_22370 36c34f6e9e9ada55ca98d719cd893f64 535 Pfam PF00082 Subtilase family 130 371 2.3E-54 T 13-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 COP00_22370 36c34f6e9e9ada55ca98d719cd893f64 535 Gene3D G3DSA:3.40.50.200 109 378 3.0E-88 T 13-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 COP00_22370 36c34f6e9e9ada55ca98d719cd893f64 535 SUPERFAMILY SSF54897 31 89 3.49E-8 T 13-10-2018 COP00_22370 36c34f6e9e9ada55ca98d719cd893f64 535 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 135 146 - T 13-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site COP00_22370 36c34f6e9e9ada55ca98d719cd893f64 535 PRINTS PR00723 Subtilisin serine protease family (S8) signature 320 336 2.0E-17 T 13-10-2018 IPR015500 Peptidase S8, subtilisin-related COP00_22370 36c34f6e9e9ada55ca98d719cd893f64 535 PRINTS PR00723 Subtilisin serine protease family (S8) signature 165 178 2.0E-17 T 13-10-2018 IPR015500 Peptidase S8, subtilisin-related COP00_22370 36c34f6e9e9ada55ca98d719cd893f64 535 PRINTS PR00723 Subtilisin serine protease family (S8) signature 130 149 2.0E-17 T 13-10-2018 IPR015500 Peptidase S8, subtilisin-related COP00_22370 36c34f6e9e9ada55ca98d719cd893f64 535 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 169 179 - T 13-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site COP00_22370 36c34f6e9e9ada55ca98d719cd893f64 535 Gene3D G3DSA:3.30.70.80 25 95 1.5E-12 T 13-10-2018 IPR037045 Peptidase S8 propeptide/proteinase inhibitor I9 superfamily Reactome: R-HSA-381426|Reactome: R-HSA-8866427|Reactome: R-HSA-8957275|Reactome: R-HSA-8964038 COP00_22370 36c34f6e9e9ada55ca98d719cd893f64 535 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 321 331 - T 13-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site COP00_06105 ac861a9c9856bf8fed689f838b4eb7fc 296 TIGRFAM TIGR02224 recomb_XerC: tyrosine recombinase XerC 7 296 3.7E-102 T 13-10-2018 IPR011931 Tyrosine recombinase XerC GO:0003677|GO:0006310|GO:0007059|GO:0015074|GO:0051301 COP00_06105 ac861a9c9856bf8fed689f838b4eb7fc 296 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 3 296 57.086 T 13-10-2018 IPR023009 Tyrosine recombinase XerC/XerD COP00_06105 ac861a9c9856bf8fed689f838b4eb7fc 296 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 7 296 2.3E-122 T 13-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 COP00_06105 ac861a9c9856bf8fed689f838b4eb7fc 296 Pfam PF00589 Phage integrase family 110 282 5.4E-56 T 13-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 COP00_06105 ac861a9c9856bf8fed689f838b4eb7fc 296 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 5 89 2.2E-23 T 13-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 COP00_06105 ac861a9c9856bf8fed689f838b4eb7fc 296 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 1 296 62.989 T 13-10-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 COP00_06105 ac861a9c9856bf8fed689f838b4eb7fc 296 SUPERFAMILY SSF56349 8 289 7.06E-60 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 COP00_06105 ac861a9c9856bf8fed689f838b4eb7fc 296 Gene3D G3DSA:1.10.150.130 2 99 1.9E-23 T 13-10-2018 IPR010998 Integrase/recombinase, N-terminal COP00_06105 ac861a9c9856bf8fed689f838b4eb7fc 296 Gene3D G3DSA:1.10.443.10 110 290 3.7E-69 T 13-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 COP00_19490 09db935cb6b238c46badc0ff1fa67de0 170 Pfam PF01967 MoaC family 15 152 9.7E-52 T 13-10-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 COP00_19490 09db935cb6b238c46badc0ff1fa67de0 170 SUPERFAMILY SSF55040 11 157 9.55E-56 T 13-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 COP00_19490 09db935cb6b238c46badc0ff1fa67de0 170 Gene3D G3DSA:3.30.70.640 1 162 2.6E-67 T 13-10-2018 IPR036522 Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 COP00_19490 09db935cb6b238c46badc0ff1fa67de0 170 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase [moaC]. 2 160 35.223 T 13-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 COP00_19490 09db935cb6b238c46badc0ff1fa67de0 170 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 4 154 1.5E-65 T 13-10-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 KEGG: 00790+4.6.1.17|MetaCyc: PWY-6823|Reactome: R-HSA-947581 COP00_08820 195d5daac4eb5131da2c7cedd40b7ab0 785 Pfam PF01713 Smr domain 710 785 1.2E-19 T 13-10-2018 IPR002625 Smr domain COP00_08820 195d5daac4eb5131da2c7cedd40b7ab0 785 SUPERFAMILY SSF52540 292 512 2.1E-47 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_08820 195d5daac4eb5131da2c7cedd40b7ab0 785 Pfam PF00488 MutS domain V 331 512 1.2E-36 T 13-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 COP00_08820 195d5daac4eb5131da2c7cedd40b7ab0 785 SMART SM00533 5 315 2.7E-40 T 13-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 COP00_08820 195d5daac4eb5131da2c7cedd40b7ab0 785 Gene3D G3DSA:3.40.50.300 292 639 1.3E-85 T 13-10-2018 COP00_08820 195d5daac4eb5131da2c7cedd40b7ab0 785 SMART SM00463 707 785 1.4E-21 T 13-10-2018 IPR002625 Smr domain COP00_08820 195d5daac4eb5131da2c7cedd40b7ab0 785 Gene3D G3DSA:3.30.1370.110 698 785 2.0E-23 T 13-10-2018 COP00_08820 195d5daac4eb5131da2c7cedd40b7ab0 785 SUPERFAMILY SSF160443 708 785 2.48E-9 T 13-10-2018 IPR036063 Smr domain superfamily COP00_08820 195d5daac4eb5131da2c7cedd40b7ab0 785 Hamap MF_00092 Endonuclease MutS2 [mutS2]. 2 784 22.358 T 13-10-2018 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 COP00_08820 195d5daac4eb5131da2c7cedd40b7ab0 785 Gene3D G3DSA:1.10.1420.10 65 283 3.0E-6 T 13-10-2018 COP00_08820 195d5daac4eb5131da2c7cedd40b7ab0 785 TIGRFAM TIGR01069 mutS2: MutS2 family protein 1 785 0.0 T 13-10-2018 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 COP00_08820 195d5daac4eb5131da2c7cedd40b7ab0 785 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 410 426 - T 13-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 COP00_08820 195d5daac4eb5131da2c7cedd40b7ab0 785 Gene3D G3DSA:1.10.1420.10 134 259 3.0E-6 T 13-10-2018 COP00_08820 195d5daac4eb5131da2c7cedd40b7ab0 785 PIRSF PIRSF005814 1 785 3.2E-289 T 13-10-2018 IPR005747 Endonuclease MutS2 GO:0004519|GO:0016887|GO:0030983|GO:0045910 COP00_08820 195d5daac4eb5131da2c7cedd40b7ab0 785 SUPERFAMILY SSF48334 21 287 1.03E-26 T 13-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily COP00_08820 195d5daac4eb5131da2c7cedd40b7ab0 785 SMART SM00534 328 513 5.7E-82 T 13-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 COP00_08210 e5ab4e78098eb05991d9fb50245535d0 254 SUPERFAMILY SSF69572 4 245 1.83E-59 T 13-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 COP00_08210 e5ab4e78098eb05991d9fb50245535d0 254 Pfam PF00899 ThiF family 6 159 3.6E-35 T 13-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 COP00_08210 e5ab4e78098eb05991d9fb50245535d0 254 Gene3D G3DSA:3.40.50.720 1 254 1.3E-77 T 13-10-2018 COP00_01595 cd45447bc92d0c304354537ed2f305e7 309 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 179 237 1.4E-13 T 13-10-2018 IPR032819 tRNA pseudouridylate synthase B, C-terminal Reactome: R-HSA-171319|Reactome: R-HSA-6790901 COP00_01595 cd45447bc92d0c304354537ed2f305e7 309 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 3 216 5.0E-88 T 13-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 COP00_01595 cd45447bc92d0c304354537ed2f305e7 309 Gene3D G3DSA:3.30.2350.10 1 242 1.2E-92 T 13-10-2018 COP00_01595 cd45447bc92d0c304354537ed2f305e7 309 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 24 178 6.3E-59 T 13-10-2018 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 COP00_01595 cd45447bc92d0c304354537ed2f305e7 309 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 2 303 19.356 T 13-10-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 COP00_01595 cd45447bc92d0c304354537ed2f305e7 309 SUPERFAMILY SSF55120 1 237 5.12E-83 T 13-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 COP00_00225 144ae1b11edd6edcb0f7b22c9df676f0 264 SUPERFAMILY SSF51735 9 261 1.44E-73 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily COP00_00225 144ae1b11edd6edcb0f7b22c9df676f0 264 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 17 260 3.8E-52 T 13-10-2018 COP00_00225 144ae1b11edd6edcb0f7b22c9df676f0 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 87 98 6.3E-7 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_00225 144ae1b11edd6edcb0f7b22c9df676f0 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 139 147 6.3E-7 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_00225 144ae1b11edd6edcb0f7b22c9df676f0 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 159 178 6.3E-7 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_00225 144ae1b11edd6edcb0f7b22c9df676f0 264 Gene3D G3DSA:3.40.50.720 2 263 1.7E-69 T 13-10-2018 COP00_00225 144ae1b11edd6edcb0f7b22c9df676f0 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 87 98 5.6E-30 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_00225 144ae1b11edd6edcb0f7b22c9df676f0 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 5.6E-30 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_00225 144ae1b11edd6edcb0f7b22c9df676f0 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 12 29 5.6E-30 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_00225 144ae1b11edd6edcb0f7b22c9df676f0 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 5.6E-30 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_00225 144ae1b11edd6edcb0f7b22c9df676f0 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 224 244 5.6E-30 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_00225 144ae1b11edd6edcb0f7b22c9df676f0 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 133 149 5.6E-30 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_09225 84af674f9374723cdb4ea18b8830cab0 227 Pfam PF11167 Protein of unknown function (DUF2953) 127 178 1.7E-14 T 13-10-2018 IPR021338 Protein of unknown function DUF2953 COP00_12735 e8963e402e8bc5184f95bd6955506301 199 Pfam PF01965 DJ-1/PfpI family 7 176 2.0E-27 T 13-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 COP00_12735 e8963e402e8bc5184f95bd6955506301 199 Gene3D G3DSA:3.40.50.880 1 197 2.7E-68 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like COP00_12735 e8963e402e8bc5184f95bd6955506301 199 SUPERFAMILY SSF52317 6 194 3.99E-53 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like COP00_12215 bf1e7721d97e17b921fa2ff6b401004d 388 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 176 204 - T 13-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 COP00_12215 bf1e7721d97e17b921fa2ff6b401004d 388 SUPERFAMILY SSF56796 4 385 3.4E-117 T 13-10-2018 COP00_12215 bf1e7721d97e17b921fa2ff6b401004d 388 Gene3D G3DSA:1.20.1090.10 189 386 5.1E-68 T 13-10-2018 COP00_12215 bf1e7721d97e17b921fa2ff6b401004d 388 Pfam PF00465 Iron-containing alcohol dehydrogenase 12 378 1.0E-111 T 13-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 COP00_12215 bf1e7721d97e17b921fa2ff6b401004d 388 Gene3D G3DSA:3.40.50.1970 1 187 5.1E-49 T 13-10-2018 COP00_03985 18897f708d6134e532b50833e35d554f 88 PRINTS PR00107 Phosphocarrier protein signature 53 70 2.4E-9 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like COP00_03985 18897f708d6134e532b50833e35d554f 88 PRINTS PR00107 Phosphocarrier protein signature 38 53 2.4E-9 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like COP00_03985 18897f708d6134e532b50833e35d554f 88 PRINTS PR00107 Phosphocarrier protein signature 13 29 2.4E-9 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like COP00_03985 18897f708d6134e532b50833e35d554f 88 Pfam PF00381 PTS HPr component phosphorylation site 4 81 5.0E-19 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like COP00_03985 18897f708d6134e532b50833e35d554f 88 SUPERFAMILY SSF55594 1 81 2.49E-18 T 13-10-2018 IPR035895 HPr-like superfamily COP00_03985 18897f708d6134e532b50833e35d554f 88 Gene3D G3DSA:3.30.1340.10 1 83 3.2E-22 T 13-10-2018 IPR035895 HPr-like superfamily COP00_03985 18897f708d6134e532b50833e35d554f 88 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 81 2.2E-18 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like COP00_12080 dc55b951287c0cc3d9154c67113b0ee1 475 Pfam PF11870 Domain of unknown function (DUF3390) 385 471 4.4E-21 T 13-10-2018 IPR024569 4Fe-4S binding protein, C-terminal COP00_12080 dc55b951287c0cc3d9154c67113b0ee1 475 Pfam PF02589 LUD domain 70 295 7.3E-56 T 13-10-2018 IPR003741 LUD domain COP00_12080 dc55b951287c0cc3d9154c67113b0ee1 475 TIGRFAM TIGR00273 TIGR00273: iron-sulfur cluster-binding protein 18 455 9.5E-220 T 13-10-2018 IPR004452 4Fe-4S binding protein GO:0019516 COP00_12080 dc55b951287c0cc3d9154c67113b0ee1 475 SUPERFAMILY SSF46548 273 393 1.24E-16 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 COP00_12080 dc55b951287c0cc3d9154c67113b0ee1 475 Pfam PF13183 4Fe-4S dicluster domain 311 377 3.1E-9 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain COP00_12080 dc55b951287c0cc3d9154c67113b0ee1 475 Gene3D G3DSA:3.40.50.10420 121 295 8.8E-15 T 13-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily COP00_12080 dc55b951287c0cc3d9154c67113b0ee1 475 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 313 324 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site COP00_12080 dc55b951287c0cc3d9154c67113b0ee1 475 Hamap MF_02103 Lactate utilization protein B [lutB]. 1 475 68.613 T 13-10-2018 IPR022825 Lactate utilization protein B COP00_12080 dc55b951287c0cc3d9154c67113b0ee1 475 SUPERFAMILY SSF100950 64 296 4.6E-39 T 13-10-2018 IPR037171 NagB/RpiA transferase-like COP00_18820 e0264f2c752eb5fa52f39d2b621cc033 144 Pfam PF13404 AsnC-type helix-turn-helix domain 3 44 2.6E-14 T 13-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 COP00_18820 e0264f2c752eb5fa52f39d2b621cc033 144 Gene3D G3DSA:1.10.10.10 1 50 6.1E-22 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_18820 e0264f2c752eb5fa52f39d2b621cc033 144 SUPERFAMILY SSF46785 2 62 4.43E-16 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_18820 e0264f2c752eb5fa52f39d2b621cc033 144 Pfam PF01037 Lrp/AsnC ligand binding domain 70 135 1.7E-14 T 13-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain COP00_18820 e0264f2c752eb5fa52f39d2b621cc033 144 SUPERFAMILY SSF54909 64 138 1.74E-17 T 13-10-2018 IPR011008 Dimeric alpha-beta barrel COP00_18820 e0264f2c752eb5fa52f39d2b621cc033 144 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 19 30 1.0E-13 T 13-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 COP00_18820 e0264f2c752eb5fa52f39d2b621cc033 144 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 30 49 1.0E-13 T 13-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 COP00_18820 e0264f2c752eb5fa52f39d2b621cc033 144 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 3 19 1.0E-13 T 13-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 COP00_18820 e0264f2c752eb5fa52f39d2b621cc033 144 SMART SM00344 3 109 1.6E-45 T 13-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 COP00_18820 e0264f2c752eb5fa52f39d2b621cc033 144 Gene3D G3DSA:3.30.70.920 51 143 9.9E-27 T 13-10-2018 COP00_10915 68d2d752057ad11422442e58709ff516 216 Gene3D G3DSA:3.90.550.10 1 207 4.5E-43 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases COP00_10915 68d2d752057ad11422442e58709ff516 216 SUPERFAMILY SSF53448 5 200 3.6E-24 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases COP00_10915 68d2d752057ad11422442e58709ff516 216 Pfam PF12804 MobA-like NTP transferase domain 8 174 7.1E-31 T 13-10-2018 IPR025877 MobA-like NTP transferase COP00_20235 7740c727dac80486d24ecfd275c4923e 512 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 4 512 1.9E-254 T 13-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 COP00_20235 7740c727dac80486d24ecfd275c4923e 512 PIRSF PIRSF000414 1 512 8.6E-215 T 13-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 COP00_20235 7740c727dac80486d24ecfd275c4923e 512 Gene3D G3DSA:3.40.140.20 204 362 5.3E-60 T 13-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 COP00_20235 7740c727dac80486d24ecfd275c4923e 512 SUPERFAMILY SSF53927 208 512 1.0E-127 T 13-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 COP00_20235 7740c727dac80486d24ecfd275c4923e 512 SUPERFAMILY SSF52335 3 194 8.11E-71 T 13-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily COP00_20235 7740c727dac80486d24ecfd275c4923e 512 Pfam PF01808 AICARFT/IMPCHase bienzyme 135 446 1.6E-122 T 13-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 COP00_20235 7740c727dac80486d24ecfd275c4923e 512 Pfam PF02142 MGS-like domain 15 129 6.8E-28 T 13-10-2018 IPR011607 Methylglyoxal synthase-like domain COP00_20235 7740c727dac80486d24ecfd275c4923e 512 Gene3D G3DSA:3.40.140.20 386 512 1.1E-56 T 13-10-2018 IPR024051 AICAR transformylase, duplicated domain superfamily KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 COP00_20235 7740c727dac80486d24ecfd275c4923e 512 SMART SM00851 15 130 3.8E-54 T 13-10-2018 IPR011607 Methylglyoxal synthase-like domain COP00_20235 7740c727dac80486d24ecfd275c4923e 512 SMART SM00798 135 447 5.2E-207 T 13-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 COP00_20235 7740c727dac80486d24ecfd275c4923e 512 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 3 512 45.205 T 13-10-2018 IPR002695 Bifunctional purine biosynthesis protein PurH-like GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 COP00_20235 7740c727dac80486d24ecfd275c4923e 512 Gene3D G3DSA:3.40.50.1380 1 198 9.9E-89 T 13-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily COP00_17090 860fa69ab50c1f669ad010983f0573c7 174 Gene3D G3DSA:1.20.120.450 1 171 2.4E-47 T 13-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes COP00_17090 860fa69ab50c1f669ad010983f0573c7 174 SUPERFAMILY SSF109854 1 154 6.41E-31 T 13-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes COP00_17090 860fa69ab50c1f669ad010983f0573c7 174 Pfam PF12867 DinB superfamily 12 150 8.7E-11 T 13-10-2018 IPR024775 DinB-like domain COP00_10040 a8a2af0f0336d657b2084c89bf65776e 132 Pfam PF13411 MerR HTH family regulatory protein 1 66 1.4E-19 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 COP00_10040 a8a2af0f0336d657b2084c89bf65776e 132 SUPERFAMILY SSF46955 1 122 1.06E-23 T 13-10-2018 IPR009061 Putative DNA-binding domain superfamily COP00_10040 a8a2af0f0336d657b2084c89bf65776e 132 Gene3D G3DSA:1.10.1660.10 2 129 1.3E-26 T 13-10-2018 COP00_10040 a8a2af0f0336d657b2084c89bf65776e 132 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 36 56 5.7E-6 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 COP00_10040 a8a2af0f0336d657b2084c89bf65776e 132 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 5.7E-6 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 COP00_10040 a8a2af0f0336d657b2084c89bf65776e 132 SMART SM00422 1 69 8.0E-20 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 COP00_08770 8a9c61ed3c58ead21490408d96d71faf 325 Gene3D G3DSA:3.40.50.1220 194 324 1.2E-56 T 13-10-2018 COP00_08770 8a9c61ed3c58ead21490408d96d71faf 325 Pfam PF01012 Electron transfer flavoprotein domain 8 179 2.1E-43 T 13-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 COP00_08770 8a9c61ed3c58ead21490408d96d71faf 325 Gene3D G3DSA:3.40.50.620 1 193 5.7E-56 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold COP00_08770 8a9c61ed3c58ead21490408d96d71faf 325 SMART SM00893 5 195 6.5E-44 T 13-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 COP00_08770 8a9c61ed3c58ead21490408d96d71faf 325 SUPERFAMILY SSF52467 198 317 9.05E-49 T 13-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily COP00_08770 8a9c61ed3c58ead21490408d96d71faf 325 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 198 281 1.5E-35 T 13-10-2018 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 COP00_08770 8a9c61ed3c58ead21490408d96d71faf 325 PIRSF PIRSF000089 1 322 8.4E-114 T 13-10-2018 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 Reactome: R-HSA-611105 COP00_08770 8a9c61ed3c58ead21490408d96d71faf 325 SUPERFAMILY SSF52402 3 190 1.12E-50 T 13-10-2018 COP00_08770 8a9c61ed3c58ead21490408d96d71faf 325 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 262 288 - T 13-10-2018 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site Reactome: R-HSA-611105 COP00_00930 1cb04c33caf93c7af5f4e617f140d8d1 77 SUPERFAMILY SSF50346 1 74 3.92E-15 T 13-10-2018 IPR011033 PRC-barrel-like superfamily COP00_00930 1cb04c33caf93c7af5f4e617f140d8d1 77 TIGRFAM TIGR02888 spore_YlmC_YmxH: sporulation protein, YlmC/YmxH family 4 75 1.4E-27 T 13-10-2018 IPR014238 Sporulation protein YlmC/YmxH COP00_00930 1cb04c33caf93c7af5f4e617f140d8d1 77 Pfam PF05239 PRC-barrel domain 2 75 1.1E-14 T 13-10-2018 IPR027275 PRC-barrel domain COP00_00930 1cb04c33caf93c7af5f4e617f140d8d1 77 Gene3D G3DSA:2.30.30.240 1 75 5.8E-13 T 13-10-2018 COP00_06890 9a451f2f129f68b588337755bebb74f9 89 Pfam PF10779 Haemolysin XhlA 10 75 7.3E-21 T 13-10-2018 IPR019715 Haemolysin XhlA COP00_22845 584cd5bea1c2e7b36ad79d51f30ce600 542 SUPERFAMILY SSF53850 35 538 1.27E-141 T 13-10-2018 COP00_22845 584cd5bea1c2e7b36ad79d51f30ce600 542 PIRSF PIRSF002741 1 542 7.9E-145 T 13-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 COP00_22845 584cd5bea1c2e7b36ad79d51f30ce600 542 Gene3D G3DSA:3.10.105.10 297 514 5.4E-178 T 13-10-2018 COP00_22845 584cd5bea1c2e7b36ad79d51f30ce600 542 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 87 109 - T 13-10-2018 IPR023765 Solute-binding protein family 5, conserved site COP00_22845 584cd5bea1c2e7b36ad79d51f30ce600 542 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 82 464 2.1E-90 T 13-10-2018 IPR000914 Solute-binding protein family 5 domain COP00_22845 584cd5bea1c2e7b36ad79d51f30ce600 542 Gene3D G3DSA:3.40.190.10 41 526 5.4E-178 T 13-10-2018 COP00_22845 584cd5bea1c2e7b36ad79d51f30ce600 542 Gene3D G3DSA:3.90.76.10 71 193 5.4E-178 T 13-10-2018 COP00_16435 59272b11f796ede3775e133b7f1cd26d 333 Gene3D G3DSA:1.10.1200.80 254 331 1.7E-20 T 13-10-2018 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 COP00_16435 59272b11f796ede3775e133b7f1cd26d 333 Gene3D G3DSA:3.20.20.70 7 251 7.4E-83 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 COP00_16435 59272b11f796ede3775e133b7f1cd26d 333 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 96 114 - T 13-10-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 COP00_16435 59272b11f796ede3775e133b7f1cd26d 333 PIRSF PIRSF006621 1 330 9.8E-111 T 13-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 COP00_16435 59272b11f796ede3775e133b7f1cd26d 333 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 4 320 6.9E-142 T 13-10-2018 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 COP00_16435 59272b11f796ede3775e133b7f1cd26d 333 Pfam PF01207 Dihydrouridine synthase (Dus) 14 319 1.8E-113 T 13-10-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 COP00_16435 59272b11f796ede3775e133b7f1cd26d 333 SUPERFAMILY SSF51395 11 318 2.38E-91 T 13-10-2018 COP00_07780 8c01f6010b8a635c877e756513f2422b 405 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 347 356 - T 13-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 COP00_07780 8c01f6010b8a635c877e756513f2422b 405 PRINTS PR00385 P450 superfamily signature 345 354 3.3E-7 T 13-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 COP00_07780 8c01f6010b8a635c877e756513f2422b 405 PRINTS PR00385 P450 superfamily signature 243 260 3.3E-7 T 13-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 COP00_07780 8c01f6010b8a635c877e756513f2422b 405 PRINTS PR00385 P450 superfamily signature 278 289 3.3E-7 T 13-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 COP00_07780 8c01f6010b8a635c877e756513f2422b 405 PRINTS PR00385 P450 superfamily signature 354 365 3.3E-7 T 13-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 COP00_07780 8c01f6010b8a635c877e756513f2422b 405 SUPERFAMILY SSF48264 20 405 3.27E-102 T 13-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 COP00_07780 8c01f6010b8a635c877e756513f2422b 405 Gene3D G3DSA:1.10.630.10 7 405 2.1E-140 T 13-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 COP00_07780 8c01f6010b8a635c877e756513f2422b 405 PRINTS PR00359 B-class P450 signature 161 176 2.2E-59 T 13-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 COP00_07780 8c01f6010b8a635c877e756513f2422b 405 PRINTS PR00359 B-class P450 signature 345 354 2.2E-59 T 13-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 COP00_07780 8c01f6010b8a635c877e756513f2422b 405 PRINTS PR00359 B-class P450 signature 98 109 2.2E-59 T 13-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 COP00_07780 8c01f6010b8a635c877e756513f2422b 405 PRINTS PR00359 B-class P450 signature 296 323 2.2E-59 T 13-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 COP00_07780 8c01f6010b8a635c877e756513f2422b 405 PRINTS PR00359 B-class P450 signature 278 289 2.2E-59 T 13-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 COP00_07780 8c01f6010b8a635c877e756513f2422b 405 PRINTS PR00359 B-class P450 signature 197 219 2.2E-59 T 13-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 COP00_07780 8c01f6010b8a635c877e756513f2422b 405 PRINTS PR00359 B-class P450 signature 144 160 2.2E-59 T 13-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 COP00_07780 8c01f6010b8a635c877e756513f2422b 405 PRINTS PR00359 B-class P450 signature 324 339 2.2E-59 T 13-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 COP00_07780 8c01f6010b8a635c877e756513f2422b 405 PRINTS PR00359 B-class P450 signature 354 365 2.2E-59 T 13-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 COP00_07780 8c01f6010b8a635c877e756513f2422b 405 Pfam PF00067 Cytochrome P450 151 376 6.4E-32 T 13-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 COP00_07780 8c01f6010b8a635c877e756513f2422b 405 Pfam PF00067 Cytochrome P450 69 204 5.4E-7 T 13-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 COP00_01830 840878e7aea5b9a48afec21f2a8122ab 151 SUPERFAMILY SSF160631 1 147 2.62E-19 T 13-10-2018 COP00_01830 840878e7aea5b9a48afec21f2a8122ab 151 Pfam PF09346 SMI1 / KNR4 family (SUKH-1) 38 118 1.8E-7 T 13-10-2018 IPR018958 Knr4/Smi1-like domain COP00_01830 840878e7aea5b9a48afec21f2a8122ab 151 SMART SM00860 23 144 4.6E-4 T 13-10-2018 IPR018958 Knr4/Smi1-like domain COP00_01830 840878e7aea5b9a48afec21f2a8122ab 151 Gene3D G3DSA:3.40.1580.10 13 149 3.2E-14 T 13-10-2018 IPR037883 Knr4/Smi1-like domain superfamily COP00_06100 c2d252a90662c897e7838d22b92f86ca 394 Pfam PF01676 Metalloenzyme superfamily 8 381 5.4E-47 T 13-10-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 COP00_06100 c2d252a90662c897e7838d22b92f86ca 394 Gene3D G3DSA:3.30.70.1250 101 219 1.1E-178 T 13-10-2018 IPR024052 Phosphopentomutase DeoB cap domain superfamily GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 COP00_06100 c2d252a90662c897e7838d22b92f86ca 394 Hamap MF_00740 Phosphopentomutase [deoB]. 6 390 55.718 T 13-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 COP00_06100 c2d252a90662c897e7838d22b92f86ca 394 TIGRFAM TIGR01696 deoB: phosphopentomutase 8 388 1.1E-213 T 13-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 COP00_06100 c2d252a90662c897e7838d22b92f86ca 394 SUPERFAMILY SSF143856 103 219 1.01E-51 T 13-10-2018 IPR024052 Phosphopentomutase DeoB cap domain superfamily GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 COP00_06100 c2d252a90662c897e7838d22b92f86ca 394 PIRSF PIRSF001491 5 394 1.5E-170 T 13-10-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 COP00_06100 c2d252a90662c897e7838d22b92f86ca 394 Gene3D G3DSA:3.40.720.10 7 390 1.1E-178 T 13-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 COP00_06100 c2d252a90662c897e7838d22b92f86ca 394 SUPERFAMILY SSF53649 5 393 8.64E-79 T 13-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 COP00_23945 f64de52e3f51c925d2e7e58048446b01 365 Gene3D G3DSA:2.30.130.10 266 362 2.2E-23 T 13-10-2018 IPR036974 PUA domain superfamily GO:0003723 COP00_23945 f64de52e3f51c925d2e7e58048446b01 365 Gene3D G3DSA:3.40.1160.10 1 260 1.7E-83 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily COP00_23945 f64de52e3f51c925d2e7e58048446b01 365 Hamap MF_00456 Glutamate 5-kinase [proB]. 4 258 36.468 T 13-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 COP00_23945 f64de52e3f51c925d2e7e58048446b01 365 PRINTS PR00474 Glutamate 5-kinase family signature 115 136 1.8E-50 T 13-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 COP00_23945 f64de52e3f51c925d2e7e58048446b01 365 PRINTS PR00474 Glutamate 5-kinase family signature 208 228 1.8E-50 T 13-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 COP00_23945 f64de52e3f51c925d2e7e58048446b01 365 PRINTS PR00474 Glutamate 5-kinase family signature 41 55 1.8E-50 T 13-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 COP00_23945 f64de52e3f51c925d2e7e58048446b01 365 PRINTS PR00474 Glutamate 5-kinase family signature 75 103 1.8E-50 T 13-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 COP00_23945 f64de52e3f51c925d2e7e58048446b01 365 PRINTS PR00474 Glutamate 5-kinase family signature 147 174 1.8E-50 T 13-10-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 COP00_23945 f64de52e3f51c925d2e7e58048446b01 365 PIRSF PIRSF000729 1 365 1.2E-132 T 13-10-2018 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 COP00_23945 f64de52e3f51c925d2e7e58048446b01 365 SUPERFAMILY SSF53633 4 254 1.02E-66 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily COP00_23945 f64de52e3f51c925d2e7e58048446b01 365 SUPERFAMILY SSF88697 277 361 1.66E-16 T 13-10-2018 IPR015947 PUA-like superfamily COP00_23945 f64de52e3f51c925d2e7e58048446b01 365 TIGRFAM TIGR01027 proB: glutamate 5-kinase 4 361 1.1E-135 T 13-10-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 COP00_23945 f64de52e3f51c925d2e7e58048446b01 365 Pfam PF01472 PUA domain 277 349 1.1E-17 T 13-10-2018 IPR002478 PUA domain GO:0003723 COP00_23945 f64de52e3f51c925d2e7e58048446b01 365 Pfam PF00696 Amino acid kinase family 4 232 1.1E-43 T 13-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 COP00_23945 f64de52e3f51c925d2e7e58048446b01 365 SMART SM00359 277 359 4.4E-14 T 13-10-2018 IPR002478 PUA domain GO:0003723 COP00_23945 f64de52e3f51c925d2e7e58048446b01 365 ProSitePatterns PS00902 Glutamate 5-kinase signature. 206 223 - T 13-10-2018 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 COP00_07435 5547546339eed19737a6c153fc4eea25 243 SUPERFAMILY SSF52266 24 234 1.1E-36 T 13-10-2018 COP00_07435 5547546339eed19737a6c153fc4eea25 243 Gene3D G3DSA:3.40.50.1110 18 237 2.4E-40 T 13-10-2018 IPR036514 SGNH hydrolase superfamily COP00_07435 5547546339eed19737a6c153fc4eea25 243 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 28 229 5.3E-21 T 13-10-2018 IPR013830 SGNH hydrolase-type esterase domain COP00_21085 d8c080f533c3ecda9bae14517cc7fcf4 295 PIRSF PIRSF016184 1 295 1.8E-77 T 13-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 COP00_21085 d8c080f533c3ecda9bae14517cc7fcf4 295 Gene3D G3DSA:3.10.310.10 1 128 6.5E-39 T 13-10-2018 COP00_21085 d8c080f533c3ecda9bae14517cc7fcf4 295 Gene3D G3DSA:3.10.310.10 129 284 1.1E-36 T 13-10-2018 COP00_21085 d8c080f533c3ecda9bae14517cc7fcf4 295 Pfam PF02567 Phenazine biosynthesis-like protein 9 288 1.6E-79 T 13-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 COP00_21085 d8c080f533c3ecda9bae14517cc7fcf4 295 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 3 295 1.2E-97 T 13-10-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 COP00_21085 d8c080f533c3ecda9bae14517cc7fcf4 295 SUPERFAMILY SSF54506 4 290 1.36E-62 T 13-10-2018 COP00_12045 e29c7138c07f07a856d3ef3ef39489b7 220 Pfam PF00072 Response regulator receiver domain 8 120 1.4E-23 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 COP00_12045 e29c7138c07f07a856d3ef3ef39489b7 220 SMART SM00448 6 119 1.4E-26 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 COP00_12045 e29c7138c07f07a856d3ef3ef39489b7 220 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 173 189 2.3E-12 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 COP00_12045 e29c7138c07f07a856d3ef3ef39489b7 220 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 159 173 2.3E-12 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 COP00_12045 e29c7138c07f07a856d3ef3ef39489b7 220 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 189 201 2.3E-12 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 COP00_12045 e29c7138c07f07a856d3ef3ef39489b7 220 ProSitePatterns PS00622 LuxR-type HTH domain signature. 173 200 - T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 COP00_12045 e29c7138c07f07a856d3ef3ef39489b7 220 Gene3D G3DSA:3.40.50.12740 6 219 1.3E-66 T 13-10-2018 COP00_12045 e29c7138c07f07a856d3ef3ef39489b7 220 Pfam PF00196 Bacterial regulatory proteins, luxR family 158 213 1.8E-18 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 COP00_12045 e29c7138c07f07a856d3ef3ef39489b7 220 SUPERFAMILY SSF46894 142 219 3.74E-21 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 COP00_12045 e29c7138c07f07a856d3ef3ef39489b7 220 SUPERFAMILY SSF52172 5 132 5.55E-30 T 13-10-2018 IPR011006 CheY-like superfamily COP00_12045 e29c7138c07f07a856d3ef3ef39489b7 220 SMART SM00421 156 213 1.2E-23 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 COP00_03730 bd624b1a198cf8e55e9cfdf249b542c5 464 ProSitePatterns PS00216 Sugar transport proteins signature 1. 68 85 - T 13-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 COP00_03730 bd624b1a198cf8e55e9cfdf249b542c5 464 Gene3D G3DSA:1.20.1250.20 4 458 3.0E-127 T 13-10-2018 COP00_03730 bd624b1a198cf8e55e9cfdf249b542c5 464 SUPERFAMILY SSF103473 11 452 6.67E-83 T 13-10-2018 IPR036259 MFS transporter superfamily COP00_03730 bd624b1a198cf8e55e9cfdf249b542c5 464 ProSitePatterns PS00217 Sugar transport proteins signature 2. 112 137 - T 13-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 COP00_03730 bd624b1a198cf8e55e9cfdf249b542c5 464 Pfam PF00083 Sugar (and other) transporter 15 452 8.1E-117 T 13-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 COP00_03730 bd624b1a198cf8e55e9cfdf249b542c5 464 PRINTS PR00171 Sugar transporter signature 355 376 1.2E-27 T 13-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 COP00_03730 bd624b1a198cf8e55e9cfdf249b542c5 464 PRINTS PR00171 Sugar transporter signature 378 390 1.2E-27 T 13-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 COP00_03730 bd624b1a198cf8e55e9cfdf249b542c5 464 PRINTS PR00171 Sugar transporter signature 20 30 1.2E-27 T 13-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 COP00_03730 bd624b1a198cf8e55e9cfdf249b542c5 464 PRINTS PR00171 Sugar transporter signature 107 126 1.2E-27 T 13-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 COP00_03730 bd624b1a198cf8e55e9cfdf249b542c5 464 PRINTS PR00171 Sugar transporter signature 267 277 1.2E-27 T 13-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 COP00_03730 bd624b1a198cf8e55e9cfdf249b542c5 464 TIGRFAM TIGR00879 SP: MFS transporter, sugar porter (SP) family 10 450 5.6E-111 T 13-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 COP00_07625 3b62058911ac636790ac4389ac839dda 362 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 22 137 6.1E-14 T 13-10-2018 IPR000014 PAS domain COP00_07625 3b62058911ac636790ac4389ac839dda 362 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 261 349 2.4E-10 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase COP00_07625 3b62058911ac636790ac4389ac839dda 362 SUPERFAMILY SSF55785 22 129 1.47E-10 T 13-10-2018 IPR035965 PAS domain superfamily COP00_07625 3b62058911ac636790ac4389ac839dda 362 SUPERFAMILY SSF55874 232 345 2.49E-19 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily COP00_07625 3b62058911ac636790ac4389ac839dda 362 Gene3D G3DSA:3.30.565.10 229 348 5.5E-27 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily COP00_07625 3b62058911ac636790ac4389ac839dda 362 Pfam PF13188 PAS domain 22 57 3.3E-8 T 13-10-2018 IPR000014 PAS domain COP00_07625 3b62058911ac636790ac4389ac839dda 362 Gene3D G3DSA:3.30.450.20 14 137 3.3E-12 T 13-10-2018 COP00_07625 3b62058911ac636790ac4389ac839dda 362 PIRSF PIRSF037432 11 349 4.4E-48 T 13-10-2018 IPR017203 Signal transduction histidine kinase, NreB GO:0000155|GO:0004673|GO:0005506|GO:0005524|GO:0005737|GO:0018106 COP00_07625 3b62058911ac636790ac4389ac839dda 362 Pfam PF07730 Histidine kinase 154 219 5.2E-12 T 13-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 COP00_07625 3b62058911ac636790ac4389ac839dda 362 SMART SM00387 259 351 1.6E-9 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase COP00_01095 ec83e834eb52a11bc2064059478359b2 204 Gene3D G3DSA:3.30.63.10 37 96 1.7E-69 T 13-10-2018 COP00_01095 ec83e834eb52a11bc2064059478359b2 204 SMART SM00072 4 187 7.1E-81 T 13-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit COP00_01095 ec83e834eb52a11bc2064059478359b2 204 Gene3D G3DSA:3.40.50.300 9 183 1.7E-69 T 13-10-2018 COP00_01095 ec83e834eb52a11bc2064059478359b2 204 SUPERFAMILY SSF52540 3 190 8.17E-71 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_01095 ec83e834eb52a11bc2064059478359b2 204 ProSitePatterns PS00856 Guanylate kinase-like signature. 40 57 - T 13-10-2018 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 COP00_01095 ec83e834eb52a11bc2064059478359b2 204 Pfam PF00625 Guanylate kinase 7 184 3.4E-54 T 13-10-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit COP00_01095 ec83e834eb52a11bc2064059478359b2 204 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 5 184 2.1E-74 T 13-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 COP00_01095 ec83e834eb52a11bc2064059478359b2 204 Hamap MF_00328 Guanylate kinase [gmk]. 3 187 37.066 T 13-10-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 COP00_03595 d4173625dcb9fab7f61422a5bd5d6f08 667 Gene3D G3DSA:3.40.50.920 540 667 3.0E-44 T 13-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 COP00_03595 d4173625dcb9fab7f61422a5bd5d6f08 667 ProSitePatterns PS00801 Transketolase signature 1. 13 33 - T 13-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 COP00_03595 d4173625dcb9fab7f61422a5bd5d6f08 667 SMART SM00861 354 525 3.9E-71 T 13-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain COP00_03595 d4173625dcb9fab7f61422a5bd5d6f08 667 TIGRFAM TIGR00232 tktlase_bact: transketolase 7 665 0.0 T 13-10-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 COP00_03595 d4173625dcb9fab7f61422a5bd5d6f08 667 ProSitePatterns PS00802 Transketolase signature 2. 467 483 - T 13-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 COP00_03595 d4173625dcb9fab7f61422a5bd5d6f08 667 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 7 338 2.2E-153 T 13-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 COP00_03595 d4173625dcb9fab7f61422a5bd5d6f08 667 SUPERFAMILY SSF52922 531 666 7.33E-42 T 13-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 COP00_03595 d4173625dcb9fab7f61422a5bd5d6f08 667 Pfam PF02780 Transketolase, C-terminal domain 548 657 2.7E-10 T 13-10-2018 IPR033248 Transketolase, C-terminal domain COP00_03595 d4173625dcb9fab7f61422a5bd5d6f08 667 Gene3D G3DSA:3.40.50.970 331 537 1.6E-80 T 13-10-2018 COP00_03595 d4173625dcb9fab7f61422a5bd5d6f08 667 Gene3D G3DSA:3.40.50.970 5 330 4.8E-127 T 13-10-2018 COP00_03595 d4173625dcb9fab7f61422a5bd5d6f08 667 SUPERFAMILY SSF52518 341 527 1.31E-69 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold COP00_03595 d4173625dcb9fab7f61422a5bd5d6f08 667 SUPERFAMILY SSF52518 8 325 9.33E-118 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold COP00_03595 d4173625dcb9fab7f61422a5bd5d6f08 667 Pfam PF02779 Transketolase, pyrimidine binding domain 354 524 1.3E-44 T 13-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain COP00_06540 7166244f48e903c720dd38b25566beca 304 SUPERFAMILY SSF53335 7 303 6.23E-60 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase COP00_06540 7166244f48e903c720dd38b25566beca 304 Gene3D G3DSA:3.40.50.150 2 303 3.7E-45 T 13-10-2018 COP00_06540 7166244f48e903c720dd38b25566beca 304 TIGRFAM TIGR00027 mthyl_TIGR00027: methyltransferase, TIGR00027 family 8 284 1.9E-42 T 13-10-2018 IPR011610 S-adenosyl-L-methionine-dependent methyltransferase, putative GO:0008168 COP00_06540 7166244f48e903c720dd38b25566beca 304 Pfam PF04072 Leucine carboxyl methyltransferase 11 205 1.6E-47 T 13-10-2018 IPR007213 Methyltransferase Ppm1/Ppm2/Tcmp GO:0008168|GO:0032259 COP00_10095 8d481c0fab0e2213f51c2a13c1f50f4a 370 SUPERFAMILY SSF48452 126 254 8.85E-12 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 COP00_10095 8d481c0fab0e2213f51c2a13c1f50f4a 370 Gene3D G3DSA:1.25.40.10 1 368 7.5E-92 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 COP00_10095 8d481c0fab0e2213f51c2a13c1f50f4a 370 SUPERFAMILY SSF81901 216 357 6.28E-6 T 13-10-2018 COP00_10095 8d481c0fab0e2213f51c2a13c1f50f4a 370 SMART SM00028 134 167 180.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 COP00_10095 8d481c0fab0e2213f51c2a13c1f50f4a 370 SMART SM00028 175 208 470.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 COP00_10095 8d481c0fab0e2213f51c2a13c1f50f4a 370 SMART SM00028 215 248 0.015 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 COP00_03580 b450ad78326a7b6388e57f667b414156 103 Gene3D G3DSA:3.10.350.10 26 99 5.6E-9 T 13-10-2018 IPR036779 LysM domain superfamily COP00_03580 b450ad78326a7b6388e57f667b414156 103 Pfam PF01476 LysM domain 39 88 1.9E-6 T 13-10-2018 IPR018392 LysM domain COP00_03580 b450ad78326a7b6388e57f667b414156 103 SMART SM00257 37 88 1.9E-4 T 13-10-2018 IPR018392 LysM domain COP00_03580 b450ad78326a7b6388e57f667b414156 103 Hamap MF_02014 Cell division suppressor protein YneA [yneA]. 1 102 26.609 T 13-10-2018 IPR022887 Cell division suppressor protein, YneA COP00_00830 1c450d6f831ff34ea7910f774a8a446b 640 SUPERFAMILY SSF54184 584 637 7.72E-11 T 13-10-2018 COP00_00830 1c450d6f831ff34ea7910f774a8a446b 640 Gene3D G3DSA:3.30.450.330 222 560 1.3E-110 T 13-10-2018 COP00_00830 1c450d6f831ff34ea7910f774a8a446b 640 TIGRFAM TIGR02214 spoVD_pbp: stage V sporulation protein D 11 637 4.4E-262 T 13-10-2018 IPR011927 Stage V sporulation protein D COP00_00830 1c450d6f831ff34ea7910f774a8a446b 640 Gene3D G3DSA:3.90.1310.30 49 220 3.5E-42 T 13-10-2018 COP00_00830 1c450d6f831ff34ea7910f774a8a446b 640 Gene3D G3DSA:3.40.710.10 283 478 1.3E-110 T 13-10-2018 COP00_00830 1c450d6f831ff34ea7910f774a8a446b 640 SUPERFAMILY SSF56519 52 220 6.02E-43 T 13-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 COP00_00830 1c450d6f831ff34ea7910f774a8a446b 640 Gene3D G3DSA:3.30.10.20 579 638 3.3E-7 T 13-10-2018 COP00_00830 1c450d6f831ff34ea7910f774a8a446b 640 Pfam PF03717 Penicillin-binding Protein dimerisation domain 56 201 2.2E-20 T 13-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 COP00_00830 1c450d6f831ff34ea7910f774a8a446b 640 Pfam PF03793 PASTA domain 584 636 6.0E-10 T 13-10-2018 IPR005543 PASTA domain COP00_00830 1c450d6f831ff34ea7910f774a8a446b 640 Pfam PF00905 Penicillin binding protein transpeptidase domain 247 556 1.1E-88 T 13-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 COP00_00830 1c450d6f831ff34ea7910f774a8a446b 640 SMART SM00740 580 638 2.9E-13 T 13-10-2018 IPR005543 PASTA domain COP00_00830 1c450d6f831ff34ea7910f774a8a446b 640 SUPERFAMILY SSF56601 171 565 6.73E-101 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like COP00_12470 9bcb598ab05dbec3a6937c4ea238928d 104 Gene3D G3DSA:3.10.450.130 32 104 6.6E-9 T 13-10-2018 COP00_12470 9bcb598ab05dbec3a6937c4ea238928d 104 Pfam PF07252 Protein of unknown function (DUF1433) 35 85 1.7E-7 T 13-10-2018 IPR009881 Protein of unknown function DUF1433 COP00_05685 96612c91f18f451ae5ad09bd992e9045 232 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 9 231 3.8E-80 T 13-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 COP00_05685 96612c91f18f451ae5ad09bd992e9045 232 Gene3D G3DSA:3.40.50.150 15 232 2.1E-64 T 13-10-2018 COP00_05685 96612c91f18f451ae5ad09bd992e9045 232 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 139 153 - T 13-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 COP00_05685 96612c91f18f451ae5ad09bd992e9045 232 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 20 35 - T 13-10-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 COP00_05685 96612c91f18f451ae5ad09bd992e9045 232 Pfam PF01209 ubiE/COQ5 methyltransferase family 2 231 1.3E-103 T 13-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 COP00_05685 96612c91f18f451ae5ad09bd992e9045 232 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 1 231 36.079 T 13-10-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 COP00_05685 96612c91f18f451ae5ad09bd992e9045 232 SUPERFAMILY SSF53335 3 227 6.39E-48 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase COP00_05685 96612c91f18f451ae5ad09bd992e9045 232 TIGRFAM TIGR02752 MenG_heptapren: demethylmenaquinone methyltransferase 3 231 1.1E-131 T 13-10-2018 IPR014122 Demethylmenaquinone methyltransferase GO:0008168|GO:0009234 KEGG: 00130+2.1.1.163|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 COP00_15670 8bce4c8d968ad3b755c73208d671fabd 159 Pfam PF02590 Predicted SPOUT methyltransferase 2 158 6.6E-59 T 13-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 COP00_15670 8bce4c8d968ad3b755c73208d671fabd 159 TIGRFAM TIGR00246 tRNA_RlmH_YbeA: rRNA large subunit m3Psi methyltransferase RlmH 1 159 4.8E-75 T 13-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 COP00_15670 8bce4c8d968ad3b755c73208d671fabd 159 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 159 30.656 T 13-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 COP00_15670 8bce4c8d968ad3b755c73208d671fabd 159 SUPERFAMILY SSF75217 2 157 3.2E-62 T 13-10-2018 IPR029028 Alpha/beta knot methyltransferases COP00_15670 8bce4c8d968ad3b755c73208d671fabd 159 PIRSF PIRSF004505 1 159 5.7E-54 T 13-10-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 COP00_15670 8bce4c8d968ad3b755c73208d671fabd 159 Gene3D G3DSA:3.40.1280.10 1 159 3.1E-69 T 13-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal COP00_22955 2f363de4bb84aff23f50d41621a5ed44 614 Pfam PF02254 TrkA-N domain 406 516 2.7E-9 T 13-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 COP00_22955 2f363de4bb84aff23f50d41621a5ed44 614 SUPERFAMILY SSF51735 404 516 3.15E-13 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily COP00_22955 2f363de4bb84aff23f50d41621a5ed44 614 Pfam PF00999 Sodium/hydrogen exchanger family 10 391 1.4E-74 T 13-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 COP00_22955 2f363de4bb84aff23f50d41621a5ed44 614 Gene3D G3DSA:3.40.50.720 400 533 3.4E-12 T 13-10-2018 COP00_22955 2f363de4bb84aff23f50d41621a5ed44 614 Gene3D G3DSA:1.20.1530.20 3 399 4.7E-70 T 13-10-2018 IPR038770 Sodium/solute symporter superfamily COP00_22955 2f363de4bb84aff23f50d41621a5ed44 614 SUPERFAMILY SSF116726 540 611 6.54E-10 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 COP00_22955 2f363de4bb84aff23f50d41621a5ed44 614 Gene3D G3DSA:3.30.70.1450 534 614 8.3E-19 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 COP00_22955 2f363de4bb84aff23f50d41621a5ed44 614 Pfam PF02080 TrkA-C domain 552 611 7.3E-9 T 13-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 COP00_17710 f58c843bd8707c76b79935eaedf4da1f 454 SUPERFAMILY SSF51604 148 424 9.16E-86 T 13-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily COP00_17710 f58c843bd8707c76b79935eaedf4da1f 454 SMART SM00922 194 294 2.6E-15 T 13-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal COP00_17710 f58c843bd8707c76b79935eaedf4da1f 454 Gene3D G3DSA:3.30.390.10 20 422 9.0E-179 T 13-10-2018 IPR029017 Enolase-like, N-terminal COP00_17710 f58c843bd8707c76b79935eaedf4da1f 454 TIGRFAM TIGR03247 glucar-dehydr: glucarate dehydratase 15 454 7.4E-261 T 13-10-2018 IPR017653 Glucarate dehydratase GO:0000287|GO:0008872|GO:0019394 KEGG: 00053+4.2.1.40|MetaCyc: PWY-6499 COP00_17710 f58c843bd8707c76b79935eaedf4da1f 454 SUPERFAMILY SSF54826 17 146 1.68E-29 T 13-10-2018 COP00_17710 f58c843bd8707c76b79935eaedf4da1f 454 Gene3D G3DSA:3.20.20.120 148 408 9.0E-179 T 13-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily COP00_17710 f58c843bd8707c76b79935eaedf4da1f 454 Pfam PF13378 Enolase C-terminal domain-like 197 414 2.7E-39 T 13-10-2018 IPR029065 Enolase C-terminal domain-like COP00_09855 6457cded060bece6a11b407bef119a81 383 Gene3D G3DSA:3.40.630.10 17 367 1.4E-136 T 13-10-2018 COP00_09855 6457cded060bece6a11b407bef119a81 383 SUPERFAMILY SSF53187 4 375 6.83E-85 T 13-10-2018 COP00_09855 6457cded060bece6a11b407bef119a81 383 PIRSF PIRSF005962 1 382 3.5E-122 T 13-10-2018 IPR017439 Amidohydrolase GO:0016787 COP00_09855 6457cded060bece6a11b407bef119a81 383 Pfam PF01546 Peptidase family M20/M25/M40 72 375 3.9E-37 T 13-10-2018 IPR002933 Peptidase M20 GO:0016787 COP00_09855 6457cded060bece6a11b407bef119a81 383 SUPERFAMILY SSF55031 182 295 2.75E-31 T 13-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain COP00_09855 6457cded060bece6a11b407bef119a81 383 Pfam PF07687 Peptidase dimerisation domain 184 276 9.7E-13 T 13-10-2018 IPR011650 Peptidase M20, dimerisation domain COP00_09855 6457cded060bece6a11b407bef119a81 383 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 13 367 1.5E-123 T 13-10-2018 IPR017439 Amidohydrolase GO:0016787 COP00_09855 6457cded060bece6a11b407bef119a81 383 Gene3D G3DSA:3.30.70.360 181 293 1.4E-136 T 13-10-2018 COP00_15430 f26f97e3b130486336f7594bf5cdf015 283 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 98 274 2.0E-19 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 COP00_15430 f26f97e3b130486336f7594bf5cdf015 283 SUPERFAMILY SSF161098 7 283 5.76E-69 T 13-10-2018 IPR035906 MetI-like superfamily COP00_15430 f26f97e3b130486336f7594bf5cdf015 283 Gene3D G3DSA:1.10.3720.10 2 270 3.2E-64 T 13-10-2018 IPR035906 MetI-like superfamily COP00_02285 db3921daeadb5648733b078834dc0884 1635 Pfam PF01464 Transglycosylase SLT domain 818 925 3.5E-32 T 13-10-2018 IPR008258 Transglycosylase SLT domain 1 COP00_02285 db3921daeadb5648733b078834dc0884 1635 SUPERFAMILY SSF51261 932 1071 6.28E-41 T 13-10-2018 IPR011055 Duplicated hybrid motif COP00_02285 db3921daeadb5648733b078834dc0884 1635 Gene3D G3DSA:1.10.530.10 775 934 2.2E-51 T 13-10-2018 COP00_02285 db3921daeadb5648733b078834dc0884 1635 Gene3D G3DSA:2.70.70.10 935 1072 3.3E-38 T 13-10-2018 IPR011055 Duplicated hybrid motif COP00_02285 db3921daeadb5648733b078834dc0884 1635 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 836 864 - T 13-10-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 COP00_02285 db3921daeadb5648733b078834dc0884 1635 Pfam PF01551 Peptidase family M23 972 1067 1.3E-30 T 13-10-2018 IPR016047 Peptidase M23 COP00_02285 db3921daeadb5648733b078834dc0884 1635 SUPERFAMILY SSF53955 811 935 1.49E-48 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily COP00_19895 f88e3e5b92a7336171f294f11ef3ab18 116 TIGRFAM TIGR02839 spore_V_AE: stage V sporulation protein AE 3 116 2.0E-49 T 13-10-2018 IPR014204 Sporulation stage V, protein AE COP00_19895 f88e3e5b92a7336171f294f11ef3ab18 116 Pfam PF03862 SpoVAC/SpoVAEB sporulation membrane protein 3 110 6.0E-39 T 13-10-2018 IPR005562 SpoVA COP00_05795 2bbac30a62ab11844264219756b2acfc 322 PRINTS PR00139 Asparaginase/glutaminase family signature 81 99 1.5E-18 T 13-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 COP00_05795 2bbac30a62ab11844264219756b2acfc 322 PRINTS PR00139 Asparaginase/glutaminase family signature 5 16 1.5E-18 T 13-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 COP00_05795 2bbac30a62ab11844264219756b2acfc 322 PRINTS PR00139 Asparaginase/glutaminase family signature 254 272 1.5E-18 T 13-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 COP00_05795 2bbac30a62ab11844264219756b2acfc 322 PIRSF PIRSF500176 1 322 1.2E-95 T 13-10-2018 COP00_05795 2bbac30a62ab11844264219756b2acfc 322 Pfam PF00710 Asparaginase, N-terminal 4 193 9.4E-53 T 13-10-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 COP00_05795 2bbac30a62ab11844264219756b2acfc 322 SUPERFAMILY SSF53774 3 312 1.44E-87 T 13-10-2018 IPR036152 Asparaginase/glutaminase-like superfamily Reactome: R-HSA-70614 COP00_05795 2bbac30a62ab11844264219756b2acfc 322 SMART SM00870 4 319 1.2E-111 T 13-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 COP00_05795 2bbac30a62ab11844264219756b2acfc 322 PIRSF PIRSF001220 1 322 1.2E-97 T 13-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 COP00_05795 2bbac30a62ab11844264219756b2acfc 322 Gene3D G3DSA:3.40.50.1170 2 209 5.0E-61 T 13-10-2018 IPR037152 L-asparaginase, N-terminal domain superfamily Reactome: R-HSA-70614 COP00_05795 2bbac30a62ab11844264219756b2acfc 322 Gene3D G3DSA:3.40.50.40 210 320 9.6E-27 T 13-10-2018 IPR027473 L-asparaginase, C-terminal Reactome: R-HSA-70614 COP00_05795 2bbac30a62ab11844264219756b2acfc 322 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 7 15 - T 13-10-2018 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 COP00_09205 48662b127a8309f64a0863912dcf63a9 395 Hamap MF_00020 Acetate kinase [ackA]. 1 395 198.889 T 13-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 COP00_09205 48662b127a8309f64a0863912dcf63a9 395 Gene3D G3DSA:3.30.420.40 2 194 1.2E-76 T 13-10-2018 COP00_09205 48662b127a8309f64a0863912dcf63a9 395 TIGRFAM TIGR00016 ackA: acetate kinase 2 394 1.9E-183 T 13-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 COP00_09205 48662b127a8309f64a0863912dcf63a9 395 SUPERFAMILY SSF53067 157 393 6.58E-95 T 13-10-2018 COP00_09205 48662b127a8309f64a0863912dcf63a9 395 PIRSF PIRSF000722 1 395 1.5E-155 T 13-10-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 COP00_09205 48662b127a8309f64a0863912dcf63a9 395 SUPERFAMILY SSF53067 1 194 1.17E-72 T 13-10-2018 COP00_09205 48662b127a8309f64a0863912dcf63a9 395 PRINTS PR00471 Acetate kinase family signature 375 387 2.9E-48 T 13-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 COP00_09205 48662b127a8309f64a0863912dcf63a9 395 PRINTS PR00471 Acetate kinase family signature 299 312 2.9E-48 T 13-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 COP00_09205 48662b127a8309f64a0863912dcf63a9 395 PRINTS PR00471 Acetate kinase family signature 202 223 2.9E-48 T 13-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 COP00_09205 48662b127a8309f64a0863912dcf63a9 395 PRINTS PR00471 Acetate kinase family signature 321 337 2.9E-48 T 13-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 COP00_09205 48662b127a8309f64a0863912dcf63a9 395 PRINTS PR00471 Acetate kinase family signature 4 15 2.9E-48 T 13-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 COP00_09205 48662b127a8309f64a0863912dcf63a9 395 PRINTS PR00471 Acetate kinase family signature 172 185 2.9E-48 T 13-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 COP00_09205 48662b127a8309f64a0863912dcf63a9 395 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 4 15 - T 13-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 COP00_09205 48662b127a8309f64a0863912dcf63a9 395 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 202 219 - T 13-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 COP00_09205 48662b127a8309f64a0863912dcf63a9 395 Gene3D G3DSA:3.30.420.40 195 395 3.9E-82 T 13-10-2018 COP00_09205 48662b127a8309f64a0863912dcf63a9 395 Pfam PF00871 Acetokinase family 3 388 3.5E-177 T 13-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 COP00_01215 68de36341a78dfd585282042135a1ec8 77 Gene3D G3DSA:1.10.1200.10 1 77 3.0E-29 T 13-10-2018 IPR036736 ACP-like superfamily COP00_01215 68de36341a78dfd585282042135a1ec8 77 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 22.699 T 13-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 COP00_01215 68de36341a78dfd585282042135a1ec8 77 SUPERFAMILY SSF47336 3 76 4.71E-23 T 13-10-2018 IPR036736 ACP-like superfamily COP00_01215 68de36341a78dfd585282042135a1ec8 77 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 3 77 5.2E-35 T 13-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 COP00_01215 68de36341a78dfd585282042135a1ec8 77 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 55 76 3.0E-5 T 13-10-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 COP00_01215 68de36341a78dfd585282042135a1ec8 77 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 13-10-2018 IPR006162 Phosphopantetheine attachment site COP00_01215 68de36341a78dfd585282042135a1ec8 77 Pfam PF00550 Phosphopantetheine attachment site 6 73 1.2E-15 T 13-10-2018 IPR009081 Phosphopantetheine binding ACP domain COP00_16005 085106768f3d4fec8a59f142e8f0e16b 440 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 29 285 3.7E-86 T 13-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 COP00_16005 085106768f3d4fec8a59f142e8f0e16b 440 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 307 410 9.9E-22 T 13-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 COP00_16005 085106768f3d4fec8a59f142e8f0e16b 440 SUPERFAMILY SSF69189 299 432 1.69E-20 T 13-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 COP00_16005 085106768f3d4fec8a59f142e8f0e16b 440 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 150 163 6.8E-15 T 13-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 COP00_16005 085106768f3d4fec8a59f142e8f0e16b 440 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 66 77 6.8E-15 T 13-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 COP00_16005 085106768f3d4fec8a59f142e8f0e16b 440 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 123 140 6.8E-15 T 13-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 COP00_16005 085106768f3d4fec8a59f142e8f0e16b 440 SUPERFAMILY SSF56601 12 307 1.93E-77 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like COP00_16005 085106768f3d4fec8a59f142e8f0e16b 440 SMART SM00936 307 410 4.3E-24 T 13-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 COP00_16005 085106768f3d4fec8a59f142e8f0e16b 440 Gene3D G3DSA:3.40.710.10 28 307 3.7E-91 T 13-10-2018 COP00_16005 085106768f3d4fec8a59f142e8f0e16b 440 Gene3D G3DSA:2.60.410.10 308 410 2.2E-21 T 13-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 COP00_06085 ad42cab7aa6a08e6b8e5af78d465904d 117 SUPERFAMILY SSF52091 4 113 6.67E-30 T 13-10-2018 IPR036513 STAS domain superfamily COP00_06085 ad42cab7aa6a08e6b8e5af78d465904d 117 TIGRFAM TIGR02886 spore_II_AA: anti-sigma F factor antagonist 5 110 1.8E-47 T 13-10-2018 IPR014237 Anti-sigma F factor antagonist GO:0006355|GO:0030435|GO:0045152 COP00_06085 ad42cab7aa6a08e6b8e5af78d465904d 117 Pfam PF01740 STAS domain 5 108 1.1E-22 T 13-10-2018 IPR002645 STAS domain COP00_06085 ad42cab7aa6a08e6b8e5af78d465904d 117 TIGRFAM TIGR00377 ant_ant_sig: anti-anti-sigma factor 1 106 2.6E-37 T 13-10-2018 IPR003658 Anti-sigma factor antagonist GO:0006355|GO:0045152 COP00_06085 ad42cab7aa6a08e6b8e5af78d465904d 117 Gene3D G3DSA:3.30.750.24 2 117 1.6E-32 T 13-10-2018 IPR036513 STAS domain superfamily COP00_21790 1289b7af76ac8aa102e3e849977a4889 470 PIRSF PIRSF006060 14 470 3.4E-94 T 13-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 COP00_21790 1289b7af76ac8aa102e3e849977a4889 470 Gene3D G3DSA:1.20.1740.10 22 469 7.8E-133 T 13-10-2018 COP00_21790 1289b7af76ac8aa102e3e849977a4889 470 TIGRFAM TIGR00909 2A0306: amino acid transporter 24 456 1.3E-180 T 13-10-2018 IPR004758 Amino acid transporter COP00_21790 1289b7af76ac8aa102e3e849977a4889 470 Pfam PF13520 Amino acid permease 28 434 1.1E-67 T 13-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 COP00_14745 2122d458fa251d782cbaf3657a1ed667 467 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 6 442 3.6E-173 T 13-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 COP00_14745 2122d458fa251d782cbaf3657a1ed667 467 PIRSF PIRSF006446 1 467 2.0E-191 T 13-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 COP00_03840 723bfbb304cd9e3168147d1b9ea30535 520 Gene3D G3DSA:3.20.20.80 30 331 9.7E-106 T 13-10-2018 COP00_03840 723bfbb304cd9e3168147d1b9ea30535 520 ProSitePatterns PS00659 Glycosyl hydrolases family 5 signature. 161 170 - T 13-10-2018 IPR018087 Glycoside hydrolase, family 5, conserved site GO:0004553|GO:0005975 COP00_03840 723bfbb304cd9e3168147d1b9ea30535 520 SUPERFAMILY SSF51445 28 333 7.28E-96 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily COP00_03840 723bfbb304cd9e3168147d1b9ea30535 520 Pfam PF00150 Cellulase (glycosyl hydrolase family 5) 49 295 5.9E-63 T 13-10-2018 IPR001547 Glycoside hydrolase, family 5 GO:0004553|GO:0005975 COP00_03840 723bfbb304cd9e3168147d1b9ea30535 520 SMART SM01067 376 457 6.8E-36 T 13-10-2018 IPR001956 Carbohydrate-binding module 3 GO:0005975|GO:0030248 COP00_03840 723bfbb304cd9e3168147d1b9ea30535 520 Gene3D G3DSA:2.60.40.710 372 520 2.2E-58 T 13-10-2018 IPR036966 Carbohydrate-binding module 3 superfamily GO:0005975|GO:0030248 COP00_03840 723bfbb304cd9e3168147d1b9ea30535 520 Pfam PF00942 Cellulose binding domain 376 456 4.6E-25 T 13-10-2018 IPR001956 Carbohydrate-binding module 3 GO:0005975|GO:0030248 COP00_03840 723bfbb304cd9e3168147d1b9ea30535 520 SUPERFAMILY SSF49384 371 519 4.87E-49 T 13-10-2018 IPR008965 CBM2/CBM3, carbohydrate-binding domain superfamily GO:0030246 COP00_11790 12ba11e2521f09400b9c65bcb6e0d682 131 SUPERFAMILY SSF159006 46 128 4.32E-21 T 13-10-2018 COP00_11790 12ba11e2521f09400b9c65bcb6e0d682 131 Pfam PF09643 YopX protein 38 128 1.7E-17 T 13-10-2018 IPR019096 YopX protein COP00_11790 12ba11e2521f09400b9c65bcb6e0d682 131 TIGRFAM TIGR01671 phage_TIGR01671: phage conserved hypothetical protein TIGR01671 41 129 2.0E-11 T 13-10-2018 IPR010024 Conserved hypothetical protein CHP1671 COP00_11790 12ba11e2521f09400b9c65bcb6e0d682 131 Gene3D G3DSA:2.30.30.290 54 131 4.3E-19 T 13-10-2018 IPR023385 YopX-like, C-terminal COP00_05840 54dff8da9682fc8bbc822a61ce1caa65 352 Pfam PF14493 Helix-turn-helix domain 257 344 2.0E-22 T 13-10-2018 IPR029491 Helicase Helix-turn-helix domain Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 COP00_05840 54dff8da9682fc8bbc822a61ce1caa65 352 PIRSF PIRSF021350 4 352 5.5E-104 T 13-10-2018 IPR008308 Uncharacterised conserved protein UCP021350 COP00_04235 d7fb2758fa6e0204fdb1367b3f82b4d6 384 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 231 378 3.3E-54 T 13-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 COP00_04235 d7fb2758fa6e0204fdb1367b3f82b4d6 384 Gene3D G3DSA:1.20.140.10 235 384 2.1E-58 T 13-10-2018 COP00_04235 d7fb2758fa6e0204fdb1367b3f82b4d6 384 SUPERFAMILY SSF47203 229 378 3.14E-60 T 13-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 COP00_04235 d7fb2758fa6e0204fdb1367b3f82b4d6 384 Gene3D G3DSA:1.10.540.10 1 120 6.6E-45 T 13-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 COP00_04235 d7fb2758fa6e0204fdb1367b3f82b4d6 384 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 118 7.8E-38 T 13-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 COP00_04235 d7fb2758fa6e0204fdb1367b3f82b4d6 384 PIRSF PIRSF016578 3 383 6.2E-25 T 13-10-2018 COP00_04235 d7fb2758fa6e0204fdb1367b3f82b4d6 384 SUPERFAMILY SSF56645 1 243 6.94E-85 T 13-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 COP00_04235 d7fb2758fa6e0204fdb1367b3f82b4d6 384 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 124 136 - T 13-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 COP00_04235 d7fb2758fa6e0204fdb1367b3f82b4d6 384 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 337 356 - T 13-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 COP00_04235 d7fb2758fa6e0204fdb1367b3f82b4d6 384 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 122 218 8.5E-26 T 13-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 COP00_04235 d7fb2758fa6e0204fdb1367b3f82b4d6 384 Gene3D G3DSA:2.40.110.10 122 234 2.1E-40 T 13-10-2018 COP00_18945 be771fd8f0c0149adabc50d28792d080 229 Pfam PF04703 FaeA-like protein 168 210 9.7E-7 T 13-10-2018 IPR006793 FaeA-like protein GO:0006355|GO:0009289 COP00_18945 be771fd8f0c0149adabc50d28792d080 229 Gene3D G3DSA:3.40.50.2300 4 143 8.0E-33 T 13-10-2018 COP00_18945 be771fd8f0c0149adabc50d28792d080 229 ProDom PD007170 TRANSCRIPTION REGULATORY REGULATION FIMBRIA FIMBRIAL PLASMID ACTIVATOR PAPI OPERON PEFI 168 210 0.009 T 13-10-2018 IPR006793 FaeA-like protein GO:0006355|GO:0009289 COP00_18945 be771fd8f0c0149adabc50d28792d080 229 Pfam PF00072 Response regulator receiver domain 9 120 1.4E-28 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 COP00_18945 be771fd8f0c0149adabc50d28792d080 229 SUPERFAMILY SSF52172 7 136 6.69E-34 T 13-10-2018 IPR011006 CheY-like superfamily COP00_18945 be771fd8f0c0149adabc50d28792d080 229 PIRSF PIRSF006171 5 228 5.1E-80 T 13-10-2018 IPR024187 Signal transduction response regulator, citrate/malate metabolism GO:0000160|GO:0003700 COP00_18945 be771fd8f0c0149adabc50d28792d080 229 SMART SM00448 7 120 2.1E-32 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 COP00_18945 be771fd8f0c0149adabc50d28792d080 229 SUPERFAMILY SSF46785 168 214 3.67E-6 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_18945 be771fd8f0c0149adabc50d28792d080 229 Gene3D G3DSA:1.10.10.10 166 217 1.7E-7 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_09340 e98c46264dd7fe2ebd3598f134087704 214 Gene3D G3DSA:3.10.580.10 1 153 4.3E-39 T 13-10-2018 COP00_09340 e98c46264dd7fe2ebd3598f134087704 214 SUPERFAMILY SSF54631 1 130 5.18E-32 T 13-10-2018 COP00_09340 e98c46264dd7fe2ebd3598f134087704 214 Pfam PF00571 CBS domain 3 53 2.5E-14 T 13-10-2018 IPR000644 CBS domain COP00_09340 e98c46264dd7fe2ebd3598f134087704 214 Pfam PF00571 CBS domain 77 125 6.5E-8 T 13-10-2018 IPR000644 CBS domain COP00_09340 e98c46264dd7fe2ebd3598f134087704 214 SMART SM00116 10 58 9.5E-12 T 13-10-2018 IPR000644 CBS domain COP00_09340 e98c46264dd7fe2ebd3598f134087704 214 SMART SM00116 81 128 8.4E-11 T 13-10-2018 IPR000644 CBS domain COP00_24125 5f1d602169fdf23a1ba9288948b96a82 396 Hamap MF_01683 Methylthioribose kinase [mtnK]. 1 396 192.589 T 13-10-2018 IPR009212 Methylthioribose kinase GO:0009086|GO:0046522 KEGG: 00270+2.7.1.100|MetaCyc: PWY-6754 COP00_24125 5f1d602169fdf23a1ba9288948b96a82 396 PIRSF PIRSF031134 4 395 1.2E-158 T 13-10-2018 IPR009212 Methylthioribose kinase GO:0009086|GO:0046522 KEGG: 00270+2.7.1.100|MetaCyc: PWY-6754 COP00_24125 5f1d602169fdf23a1ba9288948b96a82 396 Gene3D G3DSA:3.90.1200.10 120 394 1.3E-109 T 13-10-2018 COP00_24125 5f1d602169fdf23a1ba9288948b96a82 396 Pfam PF01636 Phosphotransferase enzyme family 35 269 7.7E-16 T 13-10-2018 IPR002575 Aminoglycoside phosphotransferase COP00_24125 5f1d602169fdf23a1ba9288948b96a82 396 Gene3D G3DSA:3.30.200.20 1 119 1.7E-46 T 13-10-2018 COP00_24125 5f1d602169fdf23a1ba9288948b96a82 396 TIGRFAM TIGR01767 MTRK: S-methyl-5-thioribose kinase 36 389 7.1E-162 T 13-10-2018 IPR009212 Methylthioribose kinase GO:0009086|GO:0046522 KEGG: 00270+2.7.1.100|MetaCyc: PWY-6754 COP00_24125 5f1d602169fdf23a1ba9288948b96a82 396 SUPERFAMILY SSF56112 9 391 5.47E-92 T 13-10-2018 IPR011009 Protein kinase-like domain superfamily COP00_11290 e6434dbcf53646c66a3145c3797e665e 255 SMART SM00382 12 200 1.1E-13 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_11290 e6434dbcf53646c66a3145c3797e665e 255 Pfam PF00005 ABC transporter 4 151 2.6E-31 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 COP00_11290 e6434dbcf53646c66a3145c3797e665e 255 ProSitePatterns PS00211 ABC transporters family signature. 124 138 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 COP00_11290 e6434dbcf53646c66a3145c3797e665e 255 SUPERFAMILY SSF52540 2 213 5.66E-58 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_11290 e6434dbcf53646c66a3145c3797e665e 255 Gene3D G3DSA:3.40.50.300 1 240 4.3E-65 T 13-10-2018 COP00_23665 f24592da1e591723c9f1262e48412f75 338 Gene3D G3DSA:3.90.180.10 11 324 2.5E-100 T 13-10-2018 COP00_23665 f24592da1e591723c9f1262e48412f75 338 SMART SM00829 11 336 2.5E-4 T 13-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 COP00_23665 f24592da1e591723c9f1262e48412f75 338 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 58 72 - T 13-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 COP00_23665 f24592da1e591723c9f1262e48412f75 338 Pfam PF00107 Zinc-binding dehydrogenase 176 297 7.6E-26 T 13-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 COP00_23665 f24592da1e591723c9f1262e48412f75 338 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 25 131 8.6E-35 T 13-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 COP00_23665 f24592da1e591723c9f1262e48412f75 338 SUPERFAMILY SSF51735 139 284 5.17E-33 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily COP00_23665 f24592da1e591723c9f1262e48412f75 338 SUPERFAMILY SSF50129 2 170 2.43E-51 T 13-10-2018 IPR011032 GroES-like superfamily COP00_23665 f24592da1e591723c9f1262e48412f75 338 Gene3D G3DSA:3.40.50.720 148 284 2.5E-100 T 13-10-2018 COP00_05580 cce83e664bd739f95e2c8d7cd0472091 255 SUPERFAMILY SSF46626 140 251 1.37E-14 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 COP00_05580 cce83e664bd739f95e2c8d7cd0472091 255 SUPERFAMILY SSF81648 21 157 5.36E-29 T 13-10-2018 IPR036150 Cytochrome b/b6, C-terminal domain superfamily GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 COP00_05580 cce83e664bd739f95e2c8d7cd0472091 255 Gene3D G3DSA:1.10.760.10 182 253 1.3E-15 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 COP00_05580 cce83e664bd739f95e2c8d7cd0472091 255 Gene3D G3DSA:1.20.810.10 13 168 4.1E-24 T 13-10-2018 IPR027387 Cytochrome b/b6-like domain superfamily Reactome: R-HSA-611105 COP00_05580 cce83e664bd739f95e2c8d7cd0472091 255 Pfam PF00032 Cytochrome b(C-terminal)/b6/petD 71 158 2.1E-8 T 13-10-2018 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 COP00_05580 cce83e664bd739f95e2c8d7cd0472091 255 PIRSF PIRSF036636 1 255 3.3E-146 T 13-10-2018 IPR012049 Menaquinone:cytochrome c reductase, cytochrome b/c subunit GO:0005506|GO:0009055|GO:0016021|GO:0020037 COP00_05580 cce83e664bd739f95e2c8d7cd0472091 255 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 181 249 5.5E-14 T 13-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 COP00_05250 4343ee22af39798105d38fbefd8ddb23 223 SUPERFAMILY SSF109604 9 209 1.02E-55 T 13-10-2018 COP00_05250 4343ee22af39798105d38fbefd8ddb23 223 Gene3D G3DSA:1.20.58.1910 106 215 5.9E-37 T 13-10-2018 COP00_05250 4343ee22af39798105d38fbefd8ddb23 223 Gene3D G3DSA:1.10.472.50 2 105 1.3E-30 T 13-10-2018 COP00_05250 4343ee22af39798105d38fbefd8ddb23 223 Pfam PF01966 HD domain 34 133 1.1E-4 T 13-10-2018 IPR006674 HD domain COP00_05250 4343ee22af39798105d38fbefd8ddb23 223 SMART SM00471 27 143 5.1E-4 T 13-10-2018 IPR003607 HD/PDEase domain COP00_13470 be39e54dcc64e1fb9ed0a033a04db39e 447 SMART SM00984 313 415 6.6E-41 T 13-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 COP00_13470 be39e54dcc64e1fb9ed0a033a04db39e 447 Gene3D G3DSA:3.40.50.720 1 196 1.8E-73 T 13-10-2018 COP00_13470 be39e54dcc64e1fb9ed0a033a04db39e 447 Gene3D G3DSA:3.40.50.720 229 442 2.9E-69 T 13-10-2018 COP00_13470 be39e54dcc64e1fb9ed0a033a04db39e 447 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 411 6.8E-141 T 13-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 COP00_13470 be39e54dcc64e1fb9ed0a033a04db39e 447 Gene3D G3DSA:1.20.5.100 197 228 1.1E-19 T 13-10-2018 COP00_13470 be39e54dcc64e1fb9ed0a033a04db39e 447 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 183 1.7E-68 T 13-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 COP00_13470 be39e54dcc64e1fb9ed0a033a04db39e 447 SUPERFAMILY SSF48179 197 294 3.74E-32 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 COP00_13470 be39e54dcc64e1fb9ed0a033a04db39e 447 PIRSF PIRSF000124 1 430 1.1E-140 T 13-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 COP00_13470 be39e54dcc64e1fb9ed0a033a04db39e 447 SUPERFAMILY SSF52413 302 426 7.32E-33 T 13-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 COP00_13470 be39e54dcc64e1fb9ed0a033a04db39e 447 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 198 290 4.6E-39 T 13-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 COP00_13470 be39e54dcc64e1fb9ed0a033a04db39e 447 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 314 412 1.1E-28 T 13-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 COP00_13470 be39e54dcc64e1fb9ed0a033a04db39e 447 SUPERFAMILY SSF51735 1 188 1.03E-50 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily COP00_13470 be39e54dcc64e1fb9ed0a033a04db39e 447 PIRSF PIRSF500134 1 433 6.5E-174 T 13-10-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 COP00_24280 d347af09337633a4415c573a9c5c2421 449 Pfam PF03796 DnaB-like helicase C terminal domain 171 423 1.4E-13 T 13-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 COP00_24280 d347af09337633a4415c573a9c5c2421 449 SUPERFAMILY SSF52540 171 419 2.93E-15 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_24280 d347af09337633a4415c573a9c5c2421 449 Gene3D G3DSA:3.40.50.300 150 444 9.1E-37 T 13-10-2018 COP00_17825 be3635e6ca4d2c112bf6e9238b2ca4fd 220 SMART SM00862 145 219 6.2E-19 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 COP00_17825 be3635e6ca4d2c112bf6e9238b2ca4fd 220 SUPERFAMILY SSF52172 3 126 5.55E-33 T 13-10-2018 IPR011006 CheY-like superfamily COP00_17825 be3635e6ca4d2c112bf6e9238b2ca4fd 220 SUPERFAMILY SSF46894 122 219 7.94E-23 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 COP00_17825 be3635e6ca4d2c112bf6e9238b2ca4fd 220 SMART SM00448 2 111 8.3E-33 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 COP00_17825 be3635e6ca4d2c112bf6e9238b2ca4fd 220 Pfam PF00072 Response regulator receiver domain 4 111 2.8E-21 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 COP00_17825 be3635e6ca4d2c112bf6e9238b2ca4fd 220 Gene3D G3DSA:3.40.50.2300 2 128 1.4E-29 T 13-10-2018 COP00_17825 be3635e6ca4d2c112bf6e9238b2ca4fd 220 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 218 1.7E-19 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 COP00_17825 be3635e6ca4d2c112bf6e9238b2ca4fd 220 Gene3D G3DSA:1.10.10.10 129 220 1.0E-23 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_08020 861720aa0e741b6161069d43a088513a 962 Gene3D G3DSA:2.60.40.10 879 954 2.7E-12 T 13-10-2018 IPR013783 Immunoglobulin-like fold COP00_08020 861720aa0e741b6161069d43a088513a 962 Gene3D G3DSA:2.60.40.10 720 788 1.2E-5 T 13-10-2018 IPR013783 Immunoglobulin-like fold COP00_08020 861720aa0e741b6161069d43a088513a 962 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 484 494 - T 13-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site COP00_08020 861720aa0e741b6161069d43a088513a 962 SUPERFAMILY SSF52743 426 716 1.57E-85 T 13-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 COP00_08020 861720aa0e741b6161069d43a088513a 962 Pfam PF00082 Subtilase family 442 678 1.0E-46 T 13-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 COP00_08020 861720aa0e741b6161069d43a088513a 962 PRINTS PR00723 Subtilisin serine protease family (S8) signature 440 459 4.3E-14 T 13-10-2018 IPR015500 Peptidase S8, subtilisin-related COP00_08020 861720aa0e741b6161069d43a088513a 962 PRINTS PR00723 Subtilisin serine protease family (S8) signature 634 650 4.3E-14 T 13-10-2018 IPR015500 Peptidase S8, subtilisin-related COP00_08020 861720aa0e741b6161069d43a088513a 962 PRINTS PR00723 Subtilisin serine protease family (S8) signature 480 493 4.3E-14 T 13-10-2018 IPR015500 Peptidase S8, subtilisin-related COP00_08020 861720aa0e741b6161069d43a088513a 962 Gene3D G3DSA:3.40.50.200 371 718 8.0E-86 T 13-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 COP00_08020 861720aa0e741b6161069d43a088513a 962 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 635 645 - T 13-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site COP00_02110 d1b201a4ad87f0624108baac7a69bcda 700 TIGRFAM TIGR04170 RNR_1b_NrdE: ribonucleoside-diphosphate reductase, class 1b, alpha subunit 8 700 0.0 T 13-10-2018 IPR026459 Ribonucleotide reductase, class 1b, subunit NrdE KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 COP00_02110 d1b201a4ad87f0624108baac7a69bcda 700 PRINTS PR01183 Ribonucleotide reductase large chain signature 487 510 2.2E-27 T 13-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 COP00_02110 d1b201a4ad87f0624108baac7a69bcda 700 PRINTS PR01183 Ribonucleotide reductase large chain signature 569 596 2.2E-27 T 13-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 COP00_02110 d1b201a4ad87f0624108baac7a69bcda 700 PRINTS PR01183 Ribonucleotide reductase large chain signature 376 387 2.2E-27 T 13-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 COP00_02110 d1b201a4ad87f0624108baac7a69bcda 700 PRINTS PR01183 Ribonucleotide reductase large chain signature 243 262 2.2E-27 T 13-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 COP00_02110 d1b201a4ad87f0624108baac7a69bcda 700 PRINTS PR01183 Ribonucleotide reductase large chain signature 459 481 2.2E-27 T 13-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 COP00_02110 d1b201a4ad87f0624108baac7a69bcda 700 PRINTS PR01183 Ribonucleotide reductase large chain signature 420 443 2.2E-27 T 13-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 COP00_02110 d1b201a4ad87f0624108baac7a69bcda 700 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 558 580 - T 13-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 COP00_02110 d1b201a4ad87f0624108baac7a69bcda 700 SUPERFAMILY SSF51998 167 689 4.27E-166 T 13-10-2018 COP00_02110 d1b201a4ad87f0624108baac7a69bcda 700 Gene3D G3DSA:3.20.70.20 152 686 3.3E-182 T 13-10-2018 COP00_02110 d1b201a4ad87f0624108baac7a69bcda 700 Pfam PF02867 Ribonucleotide reductase, barrel domain 168 684 8.5E-136 T 13-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 COP00_02110 d1b201a4ad87f0624108baac7a69bcda 700 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 91 163 3.6E-17 T 13-10-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 COP00_02110 d1b201a4ad87f0624108baac7a69bcda 700 SUPERFAMILY SSF48168 8 166 3.92E-50 T 13-10-2018 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 COP00_02110 d1b201a4ad87f0624108baac7a69bcda 700 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 95 688 1.6E-175 T 13-10-2018 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 COP00_02110 d1b201a4ad87f0624108baac7a69bcda 700 Pfam PF08343 Ribonucleotide reductase N-terminal 9 89 8.1E-30 T 13-10-2018 IPR013554 Ribonucleotide reductase N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 COP00_02110 d1b201a4ad87f0624108baac7a69bcda 700 Gene3D G3DSA:1.10.1650.20 286 338 3.3E-182 T 13-10-2018 COP00_15375 9cc5fe4633f683591be1c341c562ad6b 670 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 27 45 5.9E-6 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 COP00_15375 9cc5fe4633f683591be1c341c562ad6b 670 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 6 26 5.9E-6 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 COP00_15375 9cc5fe4633f683591be1c341c562ad6b 670 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 52 67 5.9E-6 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 COP00_15375 9cc5fe4633f683591be1c341c562ad6b 670 SUPERFAMILY SSF52540 5 160 2.04E-30 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_15375 9cc5fe4633f683591be1c341c562ad6b 670 Pfam PF07664 Ferrous iron transport protein B C terminus 458 510 6.2E-19 T 13-10-2018 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 COP00_15375 9cc5fe4633f683591be1c341c562ad6b 670 TIGRFAM TIGR00437 feoB: ferrous iron transport protein B 10 635 6.2E-193 T 13-10-2018 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 COP00_15375 9cc5fe4633f683591be1c341c562ad6b 670 Pfam PF07670 Nucleoside recognition 515 638 1.8E-30 T 13-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 COP00_15375 9cc5fe4633f683591be1c341c562ad6b 670 Pfam PF07670 Nucleoside recognition 354 448 1.8E-15 T 13-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 COP00_15375 9cc5fe4633f683591be1c341c562ad6b 670 Gene3D G3DSA:3.40.50.300 3 170 3.0E-35 T 13-10-2018 COP00_15375 9cc5fe4633f683591be1c341c562ad6b 670 Pfam PF02421 Ferrous iron transport protein B 5 156 1.2E-57 T 13-10-2018 IPR030389 FeoB-type guanine nucleotide-binding (G) domain GO:0005525 COP00_07335 5bdc1cbc7db46f8202bd4111942094dd 612 Pfam PF06421 GTP-binding protein LepA C-terminus 498 604 3.5E-52 T 13-10-2018 IPR013842 GTP-binding protein LepA, C-terminal COP00_07335 5bdc1cbc7db46f8202bd4111942094dd 612 SMART SM00838 408 496 9.8E-5 T 13-10-2018 IPR000640 Elongation factor EFG, domain V-like COP00_07335 5bdc1cbc7db46f8202bd4111942094dd 612 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 15 184 4.4E-20 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 COP00_07335 5bdc1cbc7db46f8202bd4111942094dd 612 TIGRFAM TIGR01393 lepA: elongation factor 4 13 606 0.0 T 13-10-2018 IPR006297 Elongation factor 4 GO:0005525 COP00_07335 5bdc1cbc7db46f8202bd4111942094dd 612 SUPERFAMILY SSF54980 302 380 1.01E-18 T 13-10-2018 IPR035647 EF-G domain III/V-like COP00_07335 5bdc1cbc7db46f8202bd4111942094dd 612 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 52 67 - T 13-10-2018 IPR031157 Tr-type G domain, conserved site COP00_07335 5bdc1cbc7db46f8202bd4111942094dd 612 PRINTS PR00315 GTP-binding elongation factor signature 84 94 4.0E-14 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 COP00_07335 5bdc1cbc7db46f8202bd4111942094dd 612 PRINTS PR00315 GTP-binding elongation factor signature 100 111 4.0E-14 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 COP00_07335 5bdc1cbc7db46f8202bd4111942094dd 612 PRINTS PR00315 GTP-binding elongation factor signature 59 67 4.0E-14 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 COP00_07335 5bdc1cbc7db46f8202bd4111942094dd 612 PRINTS PR00315 GTP-binding elongation factor signature 16 29 4.0E-14 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 COP00_07335 5bdc1cbc7db46f8202bd4111942094dd 612 PRINTS PR00315 GTP-binding elongation factor signature 136 145 4.0E-14 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 COP00_07335 5bdc1cbc7db46f8202bd4111942094dd 612 Gene3D G3DSA:3.40.50.300 10 195 1.2E-74 T 13-10-2018 COP00_07335 5bdc1cbc7db46f8202bd4111942094dd 612 Gene3D G3DSA:3.30.70.3380 378 489 9.4E-44 T 13-10-2018 COP00_07335 5bdc1cbc7db46f8202bd4111942094dd 612 SUPERFAMILY SSF52540 10 215 1.36E-55 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_07335 5bdc1cbc7db46f8202bd4111942094dd 612 Gene3D G3DSA:3.30.70.870 296 377 2.3E-36 T 13-10-2018 COP00_07335 5bdc1cbc7db46f8202bd4111942094dd 612 SUPERFAMILY SSF50447 176 298 5.61E-35 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily COP00_07335 5bdc1cbc7db46f8202bd4111942094dd 612 Gene3D G3DSA:2.40.30.10 196 295 1.9E-37 T 13-10-2018 COP00_07335 5bdc1cbc7db46f8202bd4111942094dd 612 Pfam PF00679 Elongation factor G C-terminus 409 496 5.4E-26 T 13-10-2018 IPR000640 Elongation factor EFG, domain V-like COP00_07335 5bdc1cbc7db46f8202bd4111942094dd 612 Gene3D G3DSA:3.30.70.2570 490 564 6.8E-36 T 13-10-2018 IPR038363 LepA, C-terminal domain superfamily COP00_07335 5bdc1cbc7db46f8202bd4111942094dd 612 Hamap MF_00071 Elongation factor 4 [lepA]. 1 608 315.698 T 13-10-2018 IPR006297 Elongation factor 4 GO:0005525 COP00_07335 5bdc1cbc7db46f8202bd4111942094dd 612 Pfam PF03144 Elongation factor Tu domain 2 215 285 4.4E-12 T 13-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 COP00_07335 5bdc1cbc7db46f8202bd4111942094dd 612 SUPERFAMILY SSF54980 409 504 1.53E-27 T 13-10-2018 IPR035647 EF-G domain III/V-like COP00_07335 5bdc1cbc7db46f8202bd4111942094dd 612 Pfam PF00009 Elongation factor Tu GTP binding domain 13 191 7.8E-54 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 COP00_18290 40f9c73763b3b1a7859838b6e2fdc6d0 243 Gene3D G3DSA:3.40.50.1820 8 238 7.8E-62 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold COP00_18290 40f9c73763b3b1a7859838b6e2fdc6d0 243 SMART SM00824 Thioesterase 18 172 6.9E-4 T 13-10-2018 IPR020802 Polyketide synthase, thioesterase domain GO:0009058|GO:0016788 COP00_18290 40f9c73763b3b1a7859838b6e2fdc6d0 243 Pfam PF00975 Thioesterase domain 16 233 9.0E-51 T 13-10-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 COP00_18290 40f9c73763b3b1a7859838b6e2fdc6d0 243 SUPERFAMILY SSF53474 4 235 2.41E-47 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold COP00_14115 018ffd788250278ae235add6bf457571 401 Pfam PF01494 FAD binding domain 3 344 3.0E-78 T 13-10-2018 IPR002938 FAD-binding domain GO:0071949 COP00_14115 018ffd788250278ae235add6bf457571 401 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 152 167 1.6E-27 T 13-10-2018 COP00_14115 018ffd788250278ae235add6bf457571 401 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 279 294 1.6E-27 T 13-10-2018 COP00_14115 018ffd788250278ae235add6bf457571 401 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 294 310 1.6E-27 T 13-10-2018 COP00_14115 018ffd788250278ae235add6bf457571 401 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 4 26 1.6E-27 T 13-10-2018 COP00_14115 018ffd788250278ae235add6bf457571 401 Gene3D G3DSA:3.30.9.10 73 388 1.8E-169 T 13-10-2018 COP00_14115 018ffd788250278ae235add6bf457571 401 Gene3D G3DSA:3.50.50.60 2 352 1.8E-169 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily COP00_14115 018ffd788250278ae235add6bf457571 401 SUPERFAMILY SSF54373 176 276 7.45E-42 T 13-10-2018 COP00_14115 018ffd788250278ae235add6bf457571 401 SUPERFAMILY SSF51905 3 372 1.75E-51 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily COP00_09660 355ed34483c94b65ea0f1fd4f0309eed 443 Pfam PF02687 FtsX-like permease family 330 434 3.6E-13 T 13-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 COP00_09660 355ed34483c94b65ea0f1fd4f0309eed 443 Pfam PF12704 MacB-like periplasmic core domain 22 276 1.9E-11 T 13-10-2018 IPR025857 MacB-like periplasmic core domain COP00_18575 19d68d47108bfe50d382992bbd0bed48 572 Gene3D G3DSA:1.20.1480.50 170 267 7.7E-11 T 13-10-2018 COP00_18575 19d68d47108bfe50d382992bbd0bed48 572 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 338 522 1.1E-43 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 COP00_18575 19d68d47108bfe50d382992bbd0bed48 572 Pfam PF12729 Four helix bundle sensory module for signal transduction 6 185 3.3E-36 T 13-10-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain COP00_18575 19d68d47108bfe50d382992bbd0bed48 572 Gene3D G3DSA:1.10.287.950 268 569 7.5E-69 T 13-10-2018 COP00_18575 19d68d47108bfe50d382992bbd0bed48 572 Pfam PF00672 HAMP domain 213 258 9.6E-9 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 COP00_18575 19d68d47108bfe50d382992bbd0bed48 572 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 421 450 4.4E-22 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 COP00_18575 19d68d47108bfe50d382992bbd0bed48 572 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 7 32 4.4E-22 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 COP00_18575 19d68d47108bfe50d382992bbd0bed48 572 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 392 419 4.4E-22 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 COP00_18575 19d68d47108bfe50d382992bbd0bed48 572 SMART SM00283 294 569 2.8E-79 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 COP00_18575 19d68d47108bfe50d382992bbd0bed48 572 SMART SM00304 213 265 2.3E-9 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 COP00_18575 19d68d47108bfe50d382992bbd0bed48 572 SUPERFAMILY SSF58104 233 569 2.22E-70 T 13-10-2018 COP00_08420 11d422faa72b7667d83c4c9182d72f89 93 TIGRFAM TIGR00062 L27: ribosomal protein bL27 9 89 2.1E-41 T 13-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_08420 11d422faa72b7667d83c4c9182d72f89 93 SUPERFAMILY SSF110324 10 91 2.23E-32 T 13-10-2018 COP00_08420 11d422faa72b7667d83c4c9182d72f89 93 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 9 92 27.308 T 13-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_08420 11d422faa72b7667d83c4c9182d72f89 93 ProSitePatterns PS00831 Ribosomal protein L27 signature. 42 56 - T 13-10-2018 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 COP00_08420 11d422faa72b7667d83c4c9182d72f89 93 Pfam PF01016 Ribosomal L27 protein 10 89 5.1E-35 T 13-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_08420 11d422faa72b7667d83c4c9182d72f89 93 Gene3D G3DSA:2.40.50.100 28 93 1.3E-26 T 13-10-2018 COP00_08420 11d422faa72b7667d83c4c9182d72f89 93 PRINTS PR00063 Ribosomal protein L27 signature 62 86 4.6E-39 T 13-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_08420 11d422faa72b7667d83c4c9182d72f89 93 PRINTS PR00063 Ribosomal protein L27 signature 12 36 4.6E-39 T 13-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_08420 11d422faa72b7667d83c4c9182d72f89 93 PRINTS PR00063 Ribosomal protein L27 signature 37 61 4.6E-39 T 13-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_08420 11d422faa72b7667d83c4c9182d72f89 93 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 36 77 2.0E-17 T 13-10-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_07630 151035e612c20da83c7c6e8d466e0078 111 Pfam PF00085 Thioredoxin 15 86 6.1E-7 T 13-10-2018 IPR013766 Thioredoxin domain GO:0045454 COP00_07630 151035e612c20da83c7c6e8d466e0078 111 Gene3D G3DSA:3.40.30.10 4 107 4.0E-19 T 13-10-2018 COP00_07630 151035e612c20da83c7c6e8d466e0078 111 SUPERFAMILY SSF52833 12 105 7.29E-18 T 13-10-2018 IPR036249 Thioredoxin-like superfamily COP00_15840 be6d827ea9405b95c54c159f4b8e3457 79 TIGRFAM TIGR00165 S18: ribosomal protein bS18 10 77 4.8E-38 T 13-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_15840 be6d827ea9405b95c54c159f4b8e3457 79 SUPERFAMILY SSF46911 6 77 1.83E-31 T 13-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_15840 be6d827ea9405b95c54c159f4b8e3457 79 ProSitePatterns PS00057 Ribosomal protein S18 signature. 26 49 - T 13-10-2018 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_15840 be6d827ea9405b95c54c159f4b8e3457 79 Gene3D G3DSA:4.10.640.10 3 78 1.6E-31 T 13-10-2018 IPR036870 Ribosomal protein S18 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_15840 be6d827ea9405b95c54c159f4b8e3457 79 PRINTS PR00974 Ribosomal protein S18 family signature 51 65 7.8E-22 T 13-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_15840 be6d827ea9405b95c54c159f4b8e3457 79 PRINTS PR00974 Ribosomal protein S18 family signature 43 50 7.8E-22 T 13-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_15840 be6d827ea9405b95c54c159f4b8e3457 79 PRINTS PR00974 Ribosomal protein S18 family signature 33 43 7.8E-22 T 13-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_15840 be6d827ea9405b95c54c159f4b8e3457 79 PRINTS PR00974 Ribosomal protein S18 family signature 65 75 7.8E-22 T 13-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_15840 be6d827ea9405b95c54c159f4b8e3457 79 Pfam PF01084 Ribosomal protein S18 23 73 5.2E-29 T 13-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_15840 be6d827ea9405b95c54c159f4b8e3457 79 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 25 77 1.0E-23 T 13-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_15840 be6d827ea9405b95c54c159f4b8e3457 79 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 7 78 22.752 T 13-10-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_09450 d3411b0811d7ee00ace1cd21efe7d82b 267 Gene3D G3DSA:3.90.1200.10 78 263 1.5E-22 T 13-10-2018 COP00_09450 d3411b0811d7ee00ace1cd21efe7d82b 267 SUPERFAMILY SSF56112 2 227 9.57E-32 T 13-10-2018 IPR011009 Protein kinase-like domain superfamily COP00_09450 d3411b0811d7ee00ace1cd21efe7d82b 267 Pfam PF01636 Phosphotransferase enzyme family 17 227 4.3E-22 T 13-10-2018 IPR002575 Aminoglycoside phosphotransferase COP00_24535 2fab14283f60f8f07d774675d8499549 79 Pfam PF05135 Phage gp6-like head-tail connector protein 6 72 4.9E-11 T 13-10-2018 IPR021146 Phage gp6-like head-tail connector protein COP00_24535 2fab14283f60f8f07d774675d8499549 79 TIGRFAM TIGR01560 put_DNA_pack: uncharacterized phage protein (possible DNA packaging) 6 71 2.0E-12 T 13-10-2018 IPR006450 Phage protein of unkonwn function COP00_24535 2fab14283f60f8f07d774675d8499549 79 Gene3D G3DSA:1.10.3230.30 1 73 2.6E-8 T 13-10-2018 COP00_12375 2fab14283f60f8f07d774675d8499549 79 Pfam PF05135 Phage gp6-like head-tail connector protein 6 72 4.9E-11 T 13-10-2018 IPR021146 Phage gp6-like head-tail connector protein COP00_12375 2fab14283f60f8f07d774675d8499549 79 TIGRFAM TIGR01560 put_DNA_pack: uncharacterized phage protein (possible DNA packaging) 6 71 2.0E-12 T 13-10-2018 IPR006450 Phage protein of unkonwn function COP00_12375 2fab14283f60f8f07d774675d8499549 79 Gene3D G3DSA:1.10.3230.30 1 73 2.6E-8 T 13-10-2018 COP00_00020 2fab14283f60f8f07d774675d8499549 79 Pfam PF05135 Phage gp6-like head-tail connector protein 6 72 4.9E-11 T 13-10-2018 IPR021146 Phage gp6-like head-tail connector protein COP00_00020 2fab14283f60f8f07d774675d8499549 79 TIGRFAM TIGR01560 put_DNA_pack: uncharacterized phage protein (possible DNA packaging) 6 71 2.0E-12 T 13-10-2018 IPR006450 Phage protein of unkonwn function COP00_00020 2fab14283f60f8f07d774675d8499549 79 Gene3D G3DSA:1.10.3230.30 1 73 2.6E-8 T 13-10-2018 COP00_00705 5c8a37c14d86e831c71bc081fb632558 109 Pfam PF03626 Prokaryotic Cytochrome C oxidase subunit IV 29 100 1.0E-13 T 13-10-2018 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 COP00_00705 5c8a37c14d86e831c71bc081fb632558 109 TIGRFAM TIGR02908 CoxD_Bacillus: cytochrome c oxidase, subunit IVB 1 109 8.4E-52 T 13-10-2018 IPR014257 Cytochrome c oxidase, subunit IV bacillaceae KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 COP00_15720 f37f020d40818f0d1a2722176f0e5568 614 SUPERFAMILY SSF55785 253 371 5.58E-10 T 13-10-2018 IPR035965 PAS domain superfamily COP00_15720 f37f020d40818f0d1a2722176f0e5568 614 Pfam PF13426 PAS domain 277 372 4.5E-7 T 13-10-2018 IPR000014 PAS domain COP00_15720 f37f020d40818f0d1a2722176f0e5568 614 SMART SM00388 379 446 1.3E-20 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 COP00_15720 f37f020d40818f0d1a2722176f0e5568 614 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 265 379 6.9E-6 T 13-10-2018 IPR000014 PAS domain COP00_15720 f37f020d40818f0d1a2722176f0e5568 614 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 492 603 4.9E-30 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase COP00_15720 f37f020d40818f0d1a2722176f0e5568 614 Pfam PF00672 HAMP domain 207 255 1.1E-11 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 COP00_15720 f37f020d40818f0d1a2722176f0e5568 614 SMART SM00387 491 605 4.1E-45 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase COP00_15720 f37f020d40818f0d1a2722176f0e5568 614 Gene3D G3DSA:1.10.287.130 204 278 3.2E-9 T 13-10-2018 COP00_15720 f37f020d40818f0d1a2722176f0e5568 614 Gene3D G3DSA:3.30.450.20 32 185 4.2E-40 T 13-10-2018 COP00_15720 f37f020d40818f0d1a2722176f0e5568 614 Gene3D G3DSA:3.30.450.20 279 370 3.2E-21 T 13-10-2018 COP00_15720 f37f020d40818f0d1a2722176f0e5568 614 PRINTS PR00344 Bacterial sensor protein C-terminal signature 530 544 9.1E-20 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 COP00_15720 f37f020d40818f0d1a2722176f0e5568 614 PRINTS PR00344 Bacterial sensor protein C-terminal signature 548 558 9.1E-20 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 COP00_15720 f37f020d40818f0d1a2722176f0e5568 614 PRINTS PR00344 Bacterial sensor protein C-terminal signature 565 583 9.1E-20 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 COP00_15720 f37f020d40818f0d1a2722176f0e5568 614 PRINTS PR00344 Bacterial sensor protein C-terminal signature 589 602 9.1E-20 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 COP00_15720 f37f020d40818f0d1a2722176f0e5568 614 SMART SM00304 207 259 2.5E-12 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 COP00_15720 f37f020d40818f0d1a2722176f0e5568 614 SUPERFAMILY SSF103190 72 180 6.67E-5 T 13-10-2018 IPR029151 Periplasmic sensor-like domain superfamily COP00_15720 f37f020d40818f0d1a2722176f0e5568 614 Pfam PF00512 His Kinase A (phospho-acceptor) domain 380 445 1.6E-17 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 COP00_15720 f37f020d40818f0d1a2722176f0e5568 614 Gene3D G3DSA:3.30.565.10 454 604 1.5E-51 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily COP00_15720 f37f020d40818f0d1a2722176f0e5568 614 Gene3D G3DSA:1.10.287.130 371 450 4.9E-29 T 13-10-2018 COP00_15720 f37f020d40818f0d1a2722176f0e5568 614 SMART SM00091 266 332 1.1E-5 T 13-10-2018 IPR000014 PAS domain COP00_15720 f37f020d40818f0d1a2722176f0e5568 614 SUPERFAMILY SSF47384 365 446 3.34E-20 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 COP00_15720 f37f020d40818f0d1a2722176f0e5568 614 SUPERFAMILY SSF158472 207 256 7.98E-10 T 13-10-2018 COP00_15720 f37f020d40818f0d1a2722176f0e5568 614 SUPERFAMILY SSF55874 435 603 4.32E-49 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily COP00_09785 f7a4f4424633d229880b9e9b19e4bd1c 134 Pfam PF05105 Bacteriophage holin family 18 124 2.9E-21 T 13-10-2018 IPR006480 Bacteriophage holin family COP00_09785 f7a4f4424633d229880b9e9b19e4bd1c 134 TIGRFAM TIGR01593 holin_tox_secr: toxin secretion/phage lysis holin 15 132 1.7E-22 T 13-10-2018 IPR006480 Bacteriophage holin family COP00_00050 39716c29342afeadb38834df2ebaa8f3 1766 Gene3D G3DSA:1.10.530.10 1540 1652 2.6E-5 T 13-10-2018 COP00_00050 39716c29342afeadb38834df2ebaa8f3 1766 SUPERFAMILY SSF53955 1541 1634 2.39E-9 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily COP00_00050 39716c29342afeadb38834df2ebaa8f3 1766 Pfam PF10145 Phage-related minor tail protein 323 586 3.1E-50 T 13-10-2018 IPR010090 Phage tail tape measure protein COP00_00050 39716c29342afeadb38834df2ebaa8f3 1766 SUPERFAMILY SSF48371 771 1323 1.61E-14 T 13-10-2018 IPR016024 Armadillo-type fold COP00_00050 39716c29342afeadb38834df2ebaa8f3 1766 Pfam PF01464 Transglycosylase SLT domain 1551 1658 5.0E-9 T 13-10-2018 IPR008258 Transglycosylase SLT domain 1 COP00_00050 39716c29342afeadb38834df2ebaa8f3 1766 TIGRFAM TIGR01760 tape_meas_TP901: phage tail tape measure protein, TP901 family, core region 534 691 5.1E-17 T 13-10-2018 IPR010090 Phage tail tape measure protein COP00_00050 39716c29342afeadb38834df2ebaa8f3 1766 TIGRFAM TIGR01760 tape_meas_TP901: phage tail tape measure protein, TP901 family, core region 281 496 4.2E-41 T 13-10-2018 IPR010090 Phage tail tape measure protein COP00_18335 ab41bedf24d3bfdba5f236ae1acdc7ca 553 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 65 437 1.0E-25 T 13-10-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 COP00_18335 ab41bedf24d3bfdba5f236ae1acdc7ca 553 SUPERFAMILY SSF53383 31 543 5.6E-69 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase COP00_18335 ab41bedf24d3bfdba5f236ae1acdc7ca 553 Gene3D G3DSA:3.40.640.10 103 412 4.9E-55 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 COP00_13660 78b0a405c628eff55045ad013d8cabcb 482 SUPERFAMILY SSF56024 80 312 6.91E-59 T 13-10-2018 COP00_13660 78b0a405c628eff55045ad013d8cabcb 482 Pfam PF13396 Phospholipase_D-nuclease N-terminal 14 55 4.7E-13 T 13-10-2018 IPR027379 Cardiolipin synthase N-terminal COP00_13660 78b0a405c628eff55045ad013d8cabcb 482 Hamap MF_01916 Cardiolipin synthase. 8 482 47.272 T 13-10-2018 IPR030874 Cardiolipin synthase, Firmicutes-type GO:0008808|GO:0032049 COP00_13660 78b0a405c628eff55045ad013d8cabcb 482 Pfam PF13091 PLD-like domain 323 449 2.9E-27 T 13-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 COP00_13660 78b0a405c628eff55045ad013d8cabcb 482 Pfam PF13091 PLD-like domain 135 277 1.6E-14 T 13-10-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 COP00_13660 78b0a405c628eff55045ad013d8cabcb 482 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 5 482 9.4E-195 T 13-10-2018 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 COP00_13660 78b0a405c628eff55045ad013d8cabcb 482 Gene3D G3DSA:3.30.870.10 109 299 5.9E-49 T 13-10-2018 COP00_13660 78b0a405c628eff55045ad013d8cabcb 482 SUPERFAMILY SSF56024 269 467 1.86E-51 T 13-10-2018 COP00_13660 78b0a405c628eff55045ad013d8cabcb 482 Gene3D G3DSA:3.30.870.10 300 481 1.0E-32 T 13-10-2018 COP00_13660 78b0a405c628eff55045ad013d8cabcb 482 SMART SM00155 217 244 6.3E-6 T 13-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 COP00_13660 78b0a405c628eff55045ad013d8cabcb 482 SMART SM00155 395 422 1.6E-6 T 13-10-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 COP00_19890 8817d859114aa56b0a2fccf99b1fdedf 337 TIGRFAM TIGR02845 spore_V_AD: stage V sporulation protein AD 5 332 2.4E-153 T 13-10-2018 IPR010894 Stage V sporulation AD COP00_19890 8817d859114aa56b0a2fccf99b1fdedf 337 PIRSF PIRSF011570 1 335 1.2E-157 T 13-10-2018 IPR010894 Stage V sporulation AD COP00_19890 8817d859114aa56b0a2fccf99b1fdedf 337 Gene3D G3DSA:3.40.47.40 1 337 1.1E-144 T 13-10-2018 IPR038369 Stage V sporulation AD superfamily COP00_19890 8817d859114aa56b0a2fccf99b1fdedf 337 SUPERFAMILY SSF53901 35 308 4.29E-14 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 COP00_19890 8817d859114aa56b0a2fccf99b1fdedf 337 Pfam PF07451 Stage V sporulation protein AD (SpoVAD) 4 332 3.3E-153 T 13-10-2018 IPR010894 Stage V sporulation AD COP00_15525 43c77d06c80e8a66f1c96896d80f9abe 641 PIRSF PIRSF000906 1 641 0.0 T 13-10-2018 IPR009164 Fructose-1,6-bisphosphatase class 3 GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 COP00_15525 43c77d06c80e8a66f1c96896d80f9abe 641 Hamap MF_01854 Fructose-1,6-bisphosphatase class 3 [fbp]. 2 641 39.145 T 13-10-2018 IPR009164 Fructose-1,6-bisphosphatase class 3 GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 COP00_15525 43c77d06c80e8a66f1c96896d80f9abe 641 SUPERFAMILY SSF56300 189 556 2.58E-8 T 13-10-2018 COP00_15525 43c77d06c80e8a66f1c96896d80f9abe 641 Pfam PF06874 Firmicute fructose-1,6-bisphosphatase 4 637 4.2E-283 T 13-10-2018 IPR009164 Fructose-1,6-bisphosphatase class 3 GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 COP00_10480 79005903d497df63ea8a0ed8f51ca79b 124 TIGRFAM TIGR01300 CPA3_mnhG_phaG: monovalent cation/proton antiporter, MnhG/PhaG subunit 11 108 1.7E-34 T 13-10-2018 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:1902600 COP00_10480 79005903d497df63ea8a0ed8f51ca79b 124 Pfam PF03334 Na+/H+ antiporter subunit 12 93 2.3E-27 T 13-10-2018 IPR005133 Na+/H+ antiporter subunit G GO:0005451|GO:0015672|GO:1902600 COP00_09850 c5409da4bf1c7914d23f20a45dc40687 447 SUPERFAMILY SSF103378 4 436 5.23E-94 T 13-10-2018 IPR036148 MmgE/PrpD superfamily GO:0016829 COP00_09850 c5409da4bf1c7914d23f20a45dc40687 447 Pfam PF03972 MmgE/PrpD family 7 423 1.7E-93 T 13-10-2018 IPR005656 MmgE/PrpD GO:0016829 COP00_09850 c5409da4bf1c7914d23f20a45dc40687 447 Gene3D G3DSA:3.30.1330.120 269 402 4.3E-108 T 13-10-2018 COP00_09850 c5409da4bf1c7914d23f20a45dc40687 447 Gene3D G3DSA:1.10.4100.10 25 417 4.3E-108 T 13-10-2018 COP00_03125 7803b560ca0948c95ef760bf147bb462 135 Pfam PF13411 MerR HTH family regulatory protein 13 78 1.3E-18 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 COP00_03125 7803b560ca0948c95ef760bf147bb462 135 ProSitePatterns PS00552 MerR-type HTH domain signature. 15 37 - T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 COP00_03125 7803b560ca0948c95ef760bf147bb462 135 SUPERFAMILY SSF46955 12 98 2.11E-18 T 13-10-2018 IPR009061 Putative DNA-binding domain superfamily COP00_03125 7803b560ca0948c95ef760bf147bb462 135 Gene3D G3DSA:1.10.1660.10 1 84 2.5E-26 T 13-10-2018 COP00_03125 7803b560ca0948c95ef760bf147bb462 135 SMART SM00422 12 80 9.9E-28 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 COP00_19915 b7744ba5fc7b1878031286c338bfd364 123 Gene3D G3DSA:3.10.180.10 1 123 7.1E-27 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase COP00_19915 b7744ba5fc7b1878031286c338bfd364 123 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 3 119 6.5E-18 T 13-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain COP00_19915 b7744ba5fc7b1878031286c338bfd364 123 SUPERFAMILY SSF54593 3 122 2.01E-27 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase COP00_19915 b7744ba5fc7b1878031286c338bfd364 123 ProSitePatterns PS00934 Glyoxalase I signature 1. 5 26 - T 13-10-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 COP00_02280 a830c1e38a2628b739009af34b2ddc44 253 Pfam PF05709 Phage tail protein 37 253 9.7E-14 T 13-10-2018 IPR008841 Siphovirus-type tail component COP00_02280 a830c1e38a2628b739009af34b2ddc44 253 Gene3D G3DSA:2.40.30.200 20 136 3.1E-8 T 13-10-2018 IPR038675 Streptococcus phage 7201 Orf34, N-terminal domain superfamily COP00_02280 a830c1e38a2628b739009af34b2ddc44 253 TIGRFAM TIGR01633 phi3626_gp14_N: putative phage tail component, N-terminal domain 76 135 8.1E-7 T 13-10-2018 IPR006520 Streptococcus phage 7201, Orf34, N-terminal COP00_15170 eaa0c29f84c4702101c70f6c4c67a928 481 Pfam PF00270 DEAD/DEAH box helicase 29 194 8.6E-49 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 COP00_15170 eaa0c29f84c4702101c70f6c4c67a928 481 Gene3D G3DSA:3.40.50.300 1 209 5.3E-72 T 13-10-2018 COP00_15170 eaa0c29f84c4702101c70f6c4c67a928 481 SMART SM00487 23 220 2.2E-57 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain COP00_15170 eaa0c29f84c4702101c70f6c4c67a928 481 SMART SM00490 256 337 1.8E-36 T 13-10-2018 IPR001650 Helicase, C-terminal COP00_15170 eaa0c29f84c4702101c70f6c4c67a928 481 Hamap MF_00965 ATP-dependent RNA helicase DbpA [dbpA]. 6 480 72.003 T 13-10-2018 IPR028619 ATP-dependent RNA helicase DbpA GO:0000027|GO:0003724 COP00_15170 eaa0c29f84c4702101c70f6c4c67a928 481 SUPERFAMILY SSF52540 71 358 2.03E-73 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_15170 eaa0c29f84c4702101c70f6c4c67a928 481 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 151 159 - T 13-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site COP00_15170 eaa0c29f84c4702101c70f6c4c67a928 481 Pfam PF03880 DbpA RNA binding domain 407 477 8.8E-19 T 13-10-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain COP00_15170 eaa0c29f84c4702101c70f6c4c67a928 481 Gene3D G3DSA:3.40.50.300 211 382 5.6E-51 T 13-10-2018 COP00_15170 eaa0c29f84c4702101c70f6c4c67a928 481 Pfam PF00271 Helicase conserved C-terminal domain 233 337 3.6E-30 T 13-10-2018 IPR001650 Helicase, C-terminal COP00_15170 eaa0c29f84c4702101c70f6c4c67a928 481 Gene3D G3DSA:3.30.70.330 406 481 3.6E-27 T 13-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily COP00_04990 3fb31c0dee60f13cd565b16847f0b8d6 203 SUPERFAMILY SSF53474 6 198 1.99E-52 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold COP00_04990 3fb31c0dee60f13cd565b16847f0b8d6 203 Pfam PF01738 Dienelactone hydrolase family 71 184 8.5E-11 T 13-10-2018 IPR002925 Dienelactone hydrolase GO:0016787 COP00_04990 3fb31c0dee60f13cd565b16847f0b8d6 203 Gene3D G3DSA:3.40.50.1820 4 202 1.4E-49 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold COP00_21180 9216ac67bee4aff1cb027bc09b035c6e 54 TIGRFAM TIGR01442 SASP_gamma: small, acid-soluble spore protein, gamma-type 6 54 1.1E-16 T 13-10-2018 IPR006341 Acid-soluble spore protein, gamma-type GO:0030435 COP00_21180 9216ac67bee4aff1cb027bc09b035c6e 54 Pfam PF04259 Small, acid-soluble spore protein, gamma-type 6 54 8.6E-15 T 13-10-2018 IPR006341 Acid-soluble spore protein, gamma-type GO:0030435 COP00_10920 8cbe7dd42e5bb425fd3bfeeff509b999 331 Pfam PF13478 XdhC Rossmann domain 187 322 2.2E-31 T 13-10-2018 IPR027051 XdhC Rossmann domain COP00_10920 8cbe7dd42e5bb425fd3bfeeff509b999 331 Pfam PF02625 XdhC and CoxI family 13 75 3.4E-15 T 13-10-2018 IPR003777 XdhC- CoxI COP00_10920 8cbe7dd42e5bb425fd3bfeeff509b999 331 SUPERFAMILY SSF51984 182 272 7.06E-5 T 13-10-2018 COP00_10920 8cbe7dd42e5bb425fd3bfeeff509b999 331 Gene3D G3DSA:3.40.50.720 186 331 1.8E-52 T 13-10-2018 COP00_23835 42ced006ccfd55dacd2acdaa8abd358f 295 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 94 288 4.7E-30 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 COP00_23835 42ced006ccfd55dacd2acdaa8abd358f 295 SUPERFAMILY SSF161098 13 295 4.47E-62 T 13-10-2018 IPR035906 MetI-like superfamily COP00_23835 42ced006ccfd55dacd2acdaa8abd358f 295 Gene3D G3DSA:1.10.3720.10 6 286 3.1E-75 T 13-10-2018 IPR035906 MetI-like superfamily COP00_21105 1094f8e88d818066511ad80c46ddfe73 179 Gene3D G3DSA:3.40.630.30 1 167 9.4E-22 T 13-10-2018 COP00_21105 1094f8e88d818066511ad80c46ddfe73 179 Pfam PF13302 Acetyltransferase (GNAT) domain 8 132 2.7E-14 T 13-10-2018 IPR000182 GNAT domain COP00_21105 1094f8e88d818066511ad80c46ddfe73 179 SUPERFAMILY SSF55729 2 132 3.34E-20 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase COP00_02175 d6dd6978792a805b3b42edc71e820bd1 322 Pfam PF09752 Abhydrolase domain containing 18 93 210 1.4E-7 T 13-10-2018 IPR019149 Abhydrolase domain containing 18 COP00_02175 d6dd6978792a805b3b42edc71e820bd1 322 SUPERFAMILY SSF53474 76 321 3.77E-28 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold COP00_02175 d6dd6978792a805b3b42edc71e820bd1 322 Gene3D G3DSA:3.40.50.1820 6 321 2.0E-25 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold COP00_05600 a8b56b0e3092c1e91f77b25a6a9f6182 179 Gene3D G3DSA:1.20.1440.290 1 123 5.0E-55 T 13-10-2018 IPR038091 UPF0302, N-terminal domain superfamily COP00_05600 a8b56b0e3092c1e91f77b25a6a9f6182 179 Hamap MF_00760 UPF0302 protein . 2 178 32.753 T 13-10-2018 IPR011188 Uncharacterised protein family UPF0302 COP00_05600 a8b56b0e3092c1e91f77b25a6a9f6182 179 SMART SM00914 139 175 5.4E-12 T 13-10-2018 IPR014957 IDEAL domain COP00_05600 a8b56b0e3092c1e91f77b25a6a9f6182 179 Gene3D G3DSA:4.10.810.10 124 179 1.6E-19 T 13-10-2018 IPR027393 Virus scaffolding protein, C-terminal GO:0005515 COP00_05600 a8b56b0e3092c1e91f77b25a6a9f6182 179 Pfam PF08858 IDEAL domain 139 175 8.4E-14 T 13-10-2018 IPR014957 IDEAL domain COP00_05600 a8b56b0e3092c1e91f77b25a6a9f6182 179 PIRSF PIRSF007165 1 179 3.0E-80 T 13-10-2018 IPR011188 Uncharacterised protein family UPF0302 COP00_05600 a8b56b0e3092c1e91f77b25a6a9f6182 179 Pfam PF08864 UPF0302 domain 9 112 7.1E-47 T 13-10-2018 IPR014963 Uncharacterised domain UPF0302, N-terminal COP00_09345 ad42a29d3756e3a4463ea3f063fe542b 386 Pfam PF00850 Histone deacetylase domain 21 314 1.1E-73 T 13-10-2018 IPR023801 Histone deacetylase domain Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 COP00_09345 ad42a29d3756e3a4463ea3f063fe542b 386 PRINTS PR01272 Acetoin utilisation ACUC protein signature 273 289 1.0E-48 T 13-10-2018 IPR003085 Acetoin utilization protein AcuC GO:0045149 COP00_09345 ad42a29d3756e3a4463ea3f063fe542b 386 PRINTS PR01272 Acetoin utilisation ACUC protein signature 349 368 1.0E-48 T 13-10-2018 IPR003085 Acetoin utilization protein AcuC GO:0045149 COP00_09345 ad42a29d3756e3a4463ea3f063fe542b 386 PRINTS PR01272 Acetoin utilisation ACUC protein signature 85 99 1.0E-48 T 13-10-2018 IPR003085 Acetoin utilization protein AcuC GO:0045149 COP00_09345 ad42a29d3756e3a4463ea3f063fe542b 386 PRINTS PR01272 Acetoin utilisation ACUC protein signature 106 119 1.0E-48 T 13-10-2018 IPR003085 Acetoin utilization protein AcuC GO:0045149 COP00_09345 ad42a29d3756e3a4463ea3f063fe542b 386 PRINTS PR01272 Acetoin utilisation ACUC protein signature 312 331 1.0E-48 T 13-10-2018 IPR003085 Acetoin utilization protein AcuC GO:0045149 COP00_09345 ad42a29d3756e3a4463ea3f063fe542b 386 PRINTS PR01272 Acetoin utilisation ACUC protein signature 15 35 1.0E-48 T 13-10-2018 IPR003085 Acetoin utilization protein AcuC GO:0045149 COP00_09345 ad42a29d3756e3a4463ea3f063fe542b 386 PRINTS PR01272 Acetoin utilisation ACUC protein signature 332 348 1.0E-48 T 13-10-2018 IPR003085 Acetoin utilization protein AcuC GO:0045149 COP00_09345 ad42a29d3756e3a4463ea3f063fe542b 386 SUPERFAMILY SSF52768 4 352 1.77E-101 T 13-10-2018 IPR023696 Ureohydrolase domain superfamily COP00_09345 ad42a29d3756e3a4463ea3f063fe542b 386 PRINTS PR01270 Histone deacetylase superfamily signature 162 177 1.7E-16 T 13-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 COP00_09345 ad42a29d3756e3a4463ea3f063fe542b 386 PRINTS PR01270 Histone deacetylase superfamily signature 129 152 1.7E-16 T 13-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 COP00_09345 ad42a29d3756e3a4463ea3f063fe542b 386 PRINTS PR01270 Histone deacetylase superfamily signature 248 258 1.7E-16 T 13-10-2018 IPR000286 Histone deacetylase family Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 COP00_09345 ad42a29d3756e3a4463ea3f063fe542b 386 Gene3D G3DSA:3.40.800.20 1 352 1.3E-98 T 13-10-2018 IPR037138 Histone deacetylase domain superfamily Reactome: R-HSA-2122947|Reactome: R-HSA-2644606|Reactome: R-HSA-2894862 COP00_13020 5b61b38e8b7ad97f1a55e0405d01a587 107 PIRSF PIRSF000025 1 107 2.4E-32 T 13-10-2018 IPR012218 Cytochrome c, Bacillus subtilis c550-related GO:0005506|GO:0009055|GO:0016021|GO:0020037 COP00_13020 5b61b38e8b7ad97f1a55e0405d01a587 107 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 36 103 2.0E-13 T 13-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 COP00_13020 5b61b38e8b7ad97f1a55e0405d01a587 107 SUPERFAMILY SSF46626 3 105 5.44E-18 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 COP00_13020 5b61b38e8b7ad97f1a55e0405d01a587 107 Gene3D G3DSA:1.10.760.10 37 107 3.1E-27 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 COP00_06570 e75c05e73546a748e2ecab4781b59ac5 149 SUPERFAMILY SSF46785 5 78 1.04E-24 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_06570 e75c05e73546a748e2ecab4781b59ac5 149 Gene3D G3DSA:1.10.10.10 4 67 9.0E-30 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_06570 e75c05e73546a748e2ecab4781b59ac5 149 PRINTS PR01467 Bacterial arginine repressor signature 21 34 1.5E-29 T 13-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 COP00_06570 e75c05e73546a748e2ecab4781b59ac5 149 PRINTS PR01467 Bacterial arginine repressor signature 37 52 1.5E-29 T 13-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 COP00_06570 e75c05e73546a748e2ecab4781b59ac5 149 PRINTS PR01467 Bacterial arginine repressor signature 118 133 1.5E-29 T 13-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 COP00_06570 e75c05e73546a748e2ecab4781b59ac5 149 PRINTS PR01467 Bacterial arginine repressor signature 88 101 1.5E-29 T 13-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 COP00_06570 e75c05e73546a748e2ecab4781b59ac5 149 ProDom PD007402 ARGININE REPRESSOR TRANSCRIPTION BIOSYNTHESIS DNA-BINDING REGULATION AMINO-ACID ARGR TRANSCRIPTIONAL FAMILY 87 149 3.0E-27 T 13-10-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 COP00_06570 e75c05e73546a748e2ecab4781b59ac5 149 Gene3D G3DSA:3.30.1360.40 68 149 1.2E-34 T 13-10-2018 COP00_06570 e75c05e73546a748e2ecab4781b59ac5 149 Pfam PF01316 Arginine repressor, DNA binding domain 1 70 2.9E-32 T 13-10-2018 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 COP00_06570 e75c05e73546a748e2ecab4781b59ac5 149 Pfam PF02863 Arginine repressor, C-terminal domain 81 146 1.4E-28 T 13-10-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 COP00_06570 e75c05e73546a748e2ecab4781b59ac5 149 Hamap MF_00173 Arginine repressor [argR]. 1 149 72.779 T 13-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 COP00_06570 e75c05e73546a748e2ecab4781b59ac5 149 TIGRFAM TIGR01529 argR_whole: arginine repressor 5 149 2.5E-59 T 13-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 COP00_06570 e75c05e73546a748e2ecab4781b59ac5 149 SUPERFAMILY SSF55252 80 148 6.93E-23 T 13-10-2018 IPR036251 Arginine repressor, C-terminal domain superfamily GO:0034618|GO:0051259 COP00_12790 ae1d56e52cc8a4ac9b7740176d429c1d 356 Gene3D G3DSA:1.10.287.130 72 189 2.1E-5 T 13-10-2018 COP00_12790 ae1d56e52cc8a4ac9b7740176d429c1d 356 SUPERFAMILY SSF55874 180 344 4.85E-33 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily COP00_12790 ae1d56e52cc8a4ac9b7740176d429c1d 356 SMART SM00387 235 348 1.9E-22 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase COP00_12790 ae1d56e52cc8a4ac9b7740176d429c1d 356 Gene3D G3DSA:3.30.565.10 190 350 1.7E-31 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily COP00_12790 ae1d56e52cc8a4ac9b7740176d429c1d 356 PRINTS PR00344 Bacterial sensor protein C-terminal signature 308 326 5.5E-9 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 COP00_12790 ae1d56e52cc8a4ac9b7740176d429c1d 356 PRINTS PR00344 Bacterial sensor protein C-terminal signature 332 345 5.5E-9 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 COP00_12790 ae1d56e52cc8a4ac9b7740176d429c1d 356 PRINTS PR00344 Bacterial sensor protein C-terminal signature 274 288 5.5E-9 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 COP00_12790 ae1d56e52cc8a4ac9b7740176d429c1d 356 PRINTS PR00344 Bacterial sensor protein C-terminal signature 292 302 5.5E-9 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 COP00_12790 ae1d56e52cc8a4ac9b7740176d429c1d 356 SMART SM00388 124 189 7.8E-5 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 COP00_12790 ae1d56e52cc8a4ac9b7740176d429c1d 356 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 236 344 6.8E-18 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase COP00_24175 50ce81dcc58e55a1d225288c6c4b96d0 155 PRINTS PR00598 Bacterial regulatory protein MarR family signature 70 85 8.3E-10 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 COP00_24175 50ce81dcc58e55a1d225288c6c4b96d0 155 PRINTS PR00598 Bacterial regulatory protein MarR family signature 89 105 8.3E-10 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 COP00_24175 50ce81dcc58e55a1d225288c6c4b96d0 155 PRINTS PR00598 Bacterial regulatory protein MarR family signature 119 139 8.3E-10 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 COP00_24175 50ce81dcc58e55a1d225288c6c4b96d0 155 SUPERFAMILY SSF46785 9 145 1.82E-32 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_24175 50ce81dcc58e55a1d225288c6c4b96d0 155 SMART SM00347 29 129 9.2E-27 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 COP00_24175 50ce81dcc58e55a1d225288c6c4b96d0 155 Pfam PF01047 MarR family 36 93 3.8E-17 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 COP00_24175 50ce81dcc58e55a1d225288c6c4b96d0 155 Gene3D G3DSA:1.10.10.10 1 154 6.1E-32 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_24175 50ce81dcc58e55a1d225288c6c4b96d0 155 ProSitePatterns PS01117 MarR-type HTH domain signature. 68 102 - T 13-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site COP00_10990 70413d4992f0e4d3c709cb76a8fb9967 341 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 COP00_10990 70413d4992f0e4d3c709cb76a8fb9967 341 SUPERFAMILY SSF52540 1 240 1.27E-81 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_10990 70413d4992f0e4d3c709cb76a8fb9967 341 SMART SM00382 30 218 2.5E-16 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_10990 70413d4992f0e4d3c709cb76a8fb9967 341 Pfam PF09383 NIL domain 266 337 2.5E-21 T 13-10-2018 IPR018449 NIL domain COP00_10990 70413d4992f0e4d3c709cb76a8fb9967 341 SUPERFAMILY SSF55021 249 340 2.06E-23 T 13-10-2018 COP00_10990 70413d4992f0e4d3c709cb76a8fb9967 341 Gene3D G3DSA:3.40.50.300 1 243 5.7E-76 T 13-10-2018 COP00_10990 70413d4992f0e4d3c709cb76a8fb9967 341 Pfam PF00005 ABC transporter 22 169 2.3E-35 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 COP00_10990 70413d4992f0e4d3c709cb76a8fb9967 341 SMART SM00930 263 338 5.4E-28 T 13-10-2018 IPR018449 NIL domain COP00_10990 70413d4992f0e4d3c709cb76a8fb9967 341 Gene3D G3DSA:3.30.70.260 244 341 5.0E-29 T 13-10-2018 COP00_23550 c75a8fb0ed23495c73368d97f01fbbec 360 SUPERFAMILY SSF47090 190 259 9.42E-19 T 13-10-2018 IPR036365 PGBD-like superfamily COP00_23550 c75a8fb0ed23495c73368d97f01fbbec 360 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 24 153 4.2E-21 T 13-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 COP00_23550 c75a8fb0ed23495c73368d97f01fbbec 360 Gene3D G3DSA:3.40.80.10 4 183 2.6E-44 T 13-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 COP00_23550 c75a8fb0ed23495c73368d97f01fbbec 360 SUPERFAMILY SSF55846 6 169 1.83E-38 T 13-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 COP00_23550 c75a8fb0ed23495c73368d97f01fbbec 360 Gene3D G3DSA:1.10.101.10 285 360 2.9E-19 T 13-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 COP00_23550 c75a8fb0ed23495c73368d97f01fbbec 360 Pfam PF01471 Putative peptidoglycan binding domain 200 258 3.8E-15 T 13-10-2018 IPR002477 Peptidoglycan binding-like COP00_23550 c75a8fb0ed23495c73368d97f01fbbec 360 Pfam PF01471 Putative peptidoglycan binding domain 293 354 7.6E-18 T 13-10-2018 IPR002477 Peptidoglycan binding-like COP00_23550 c75a8fb0ed23495c73368d97f01fbbec 360 SMART SM00644 14 168 1.3E-35 T 13-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 COP00_23550 c75a8fb0ed23495c73368d97f01fbbec 360 SUPERFAMILY SSF47090 284 354 1.94E-18 T 13-10-2018 IPR036365 PGBD-like superfamily COP00_23550 c75a8fb0ed23495c73368d97f01fbbec 360 Gene3D G3DSA:1.10.101.10 185 261 2.2E-21 T 13-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 COP00_20395 7391a70886f50531e7d32a3f73b777eb 282 Gene3D G3DSA:1.10.1790.10 170 278 6.6E-30 T 13-10-2018 COP00_20395 7391a70886f50531e7d32a3f73b777eb 282 Gene3D G3DSA:2.30.24.10 1 66 4.3E-19 T 13-10-2018 IPR036650 CAT RNA-binding domain superfamily GO:0003723 COP00_20395 7391a70886f50531e7d32a3f73b777eb 282 SUPERFAMILY SSF63520 173 276 1.44E-26 T 13-10-2018 IPR036634 PRD domain superfamily GO:0006355 COP00_20395 7391a70886f50531e7d32a3f73b777eb 282 SUPERFAMILY SSF50151 2 53 5.89E-14 T 13-10-2018 IPR036650 CAT RNA-binding domain superfamily GO:0003723 COP00_20395 7391a70886f50531e7d32a3f73b777eb 282 SMART SM01061 2 60 1.2E-20 T 13-10-2018 IPR004341 CAT RNA-binding domain GO:0003723 COP00_20395 7391a70886f50531e7d32a3f73b777eb 282 SUPERFAMILY SSF63520 60 167 6.93E-29 T 13-10-2018 IPR036634 PRD domain superfamily GO:0006355 COP00_20395 7391a70886f50531e7d32a3f73b777eb 282 Pfam PF00874 PRD domain 183 274 2.5E-18 T 13-10-2018 IPR011608 PRD domain GO:0006355 COP00_20395 7391a70886f50531e7d32a3f73b777eb 282 Pfam PF00874 PRD domain 76 163 5.7E-22 T 13-10-2018 IPR011608 PRD domain GO:0006355 COP00_20395 7391a70886f50531e7d32a3f73b777eb 282 Gene3D G3DSA:1.10.1790.10 67 167 1.2E-33 T 13-10-2018 COP00_20395 7391a70886f50531e7d32a3f73b777eb 282 Pfam PF03123 CAT RNA binding domain 3 55 4.2E-17 T 13-10-2018 IPR004341 CAT RNA-binding domain GO:0003723 COP00_07850 64c1ca511d832cf9c2075bd95d754461 676 ProSitePatterns PS00609 Glycosyl hydrolases family 32 active site. 38 51 - T 13-10-2018 IPR018053 Glycoside hydrolase, family 32, active site GO:0004553|GO:0005975 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26 COP00_07850 64c1ca511d832cf9c2075bd95d754461 676 SUPERFAMILY SSF49899 348 512 5.8E-39 T 13-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily COP00_07850 64c1ca511d832cf9c2075bd95d754461 676 Gene3D G3DSA:2.60.120.560 514 673 6.1E-47 T 13-10-2018 COP00_07850 64c1ca511d832cf9c2075bd95d754461 676 SUPERFAMILY SSF75005 28 349 1.38E-111 T 13-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily COP00_07850 64c1ca511d832cf9c2075bd95d754461 676 Pfam PF08244 Glycosyl hydrolases family 32 C terminal 350 506 9.0E-42 T 13-10-2018 IPR013189 Glycosyl hydrolase family 32, C-terminal COP00_07850 64c1ca511d832cf9c2075bd95d754461 676 Pfam PF00251 Glycosyl hydrolases family 32 N-terminal domain 38 348 3.2E-105 T 13-10-2018 IPR013148 Glycosyl hydrolase family 32, N-terminal COP00_07850 64c1ca511d832cf9c2075bd95d754461 676 Pfam PF06439 Domain of Unknown Function (DUF1080) 519 674 5.8E-7 T 13-10-2018 IPR010496 Domain of unknown function DUF1080 COP00_07850 64c1ca511d832cf9c2075bd95d754461 676 Gene3D G3DSA:2.115.10.20 28 359 3.0E-133 T 13-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily COP00_07850 64c1ca511d832cf9c2075bd95d754461 676 SMART SM00640 38 472 1.9E-174 T 13-10-2018 IPR001362 Glycoside hydrolase, family 32 GO:0004553|GO:0005975 COP00_07850 64c1ca511d832cf9c2075bd95d754461 676 Gene3D G3DSA:2.60.120.560 360 513 4.8E-51 T 13-10-2018 COP00_15695 8eb856fba4851d668734fe20d59302da 281 SUPERFAMILY SSF102522 4 167 2.62E-56 T 13-10-2018 IPR023228 S-adenosyl-l-methionine hydroxide adenosyltransferase, N-terminal COP00_15695 8eb856fba4851d668734fe20d59302da 281 Gene3D G3DSA:2.40.30.90 170 278 4.3E-32 T 13-10-2018 IPR023227 S-adenosyl-l-methionine hydroxide adenosyltransferase, C-terminal COP00_15695 8eb856fba4851d668734fe20d59302da 281 PIRSF PIRSF006779 1 278 3.2E-94 T 13-10-2018 IPR002747 SAM-dependent chlorinase/fluorinase COP00_15695 8eb856fba4851d668734fe20d59302da 281 Pfam PF01887 S-adenosyl-l-methionine hydroxide adenosyltransferase 6 270 2.3E-73 T 13-10-2018 IPR002747 SAM-dependent chlorinase/fluorinase COP00_15695 8eb856fba4851d668734fe20d59302da 281 Gene3D G3DSA:3.40.50.10790 1 166 2.5E-52 T 13-10-2018 IPR023228 S-adenosyl-l-methionine hydroxide adenosyltransferase, N-terminal COP00_15695 8eb856fba4851d668734fe20d59302da 281 SUPERFAMILY SSF101852 170 276 4.58E-30 T 13-10-2018 IPR023227 S-adenosyl-l-methionine hydroxide adenosyltransferase, C-terminal COP00_24335 458a0fcf969824f998c3d32109eb66d4 765 SMART SM00474 122 312 6.7E-19 T 13-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 COP00_24335 458a0fcf969824f998c3d32109eb66d4 765 Gene3D G3DSA:1.10.150.20 506 676 7.0E-54 T 13-10-2018 COP00_24335 458a0fcf969824f998c3d32109eb66d4 765 SUPERFAMILY SSF53098 119 312 1.03E-35 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily COP00_24335 458a0fcf969824f998c3d32109eb66d4 765 Pfam PF00476 DNA polymerase family A 351 751 9.8E-59 T 13-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 COP00_24335 458a0fcf969824f998c3d32109eb66d4 765 Gene3D G3DSA:3.30.70.370 457 749 7.0E-54 T 13-10-2018 COP00_24335 458a0fcf969824f998c3d32109eb66d4 765 SMART SM00482 483 715 2.0E-19 T 13-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 COP00_24335 458a0fcf969824f998c3d32109eb66d4 765 SUPERFAMILY SSF56672 318 751 1.89E-82 T 13-10-2018 COP00_24335 458a0fcf969824f998c3d32109eb66d4 765 Pfam PF01612 3'-5' exonuclease 122 305 5.4E-28 T 13-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 COP00_24335 458a0fcf969824f998c3d32109eb66d4 765 Gene3D G3DSA:1.20.1060.10 338 452 8.7E-12 T 13-10-2018 COP00_24335 458a0fcf969824f998c3d32109eb66d4 765 Gene3D G3DSA:3.30.420.10 119 336 4.6E-58 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 COP00_24335 458a0fcf969824f998c3d32109eb66d4 765 PRINTS PR00868 DNA-polymerase family A (pol I) signature 669 685 2.5E-13 T 13-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 COP00_24335 458a0fcf969824f998c3d32109eb66d4 765 PRINTS PR00868 DNA-polymerase family A (pol I) signature 497 520 2.5E-13 T 13-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 COP00_24335 458a0fcf969824f998c3d32109eb66d4 765 PRINTS PR00868 DNA-polymerase family A (pol I) signature 449 471 2.5E-13 T 13-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 COP00_24335 458a0fcf969824f998c3d32109eb66d4 765 PRINTS PR00868 DNA-polymerase family A (pol I) signature 698 711 2.5E-13 T 13-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 COP00_24335 458a0fcf969824f998c3d32109eb66d4 765 PRINTS PR00868 DNA-polymerase family A (pol I) signature 595 606 2.5E-13 T 13-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 COP00_01540 3fc970f6031e68a9b1458fb61cdaf3cb 572 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 8.1E-17 T 13-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 COP00_01540 3fc970f6031e68a9b1458fb61cdaf3cb 572 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 8.1E-17 T 13-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 COP00_01540 3fc970f6031e68a9b1458fb61cdaf3cb 572 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 8.1E-17 T 13-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 COP00_01540 3fc970f6031e68a9b1458fb61cdaf3cb 572 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 8.1E-17 T 13-10-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 COP00_01540 3fc970f6031e68a9b1458fb61cdaf3cb 572 SUPERFAMILY SSF55681 9 475 6.32E-101 T 13-10-2018 COP00_01540 3fc970f6031e68a9b1458fb61cdaf3cb 572 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 566 41.686 T 13-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 COP00_01540 3fc970f6031e68a9b1458fb61cdaf3cb 572 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 564 2.9E-253 T 13-10-2018 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 COP00_01540 3fc970f6031e68a9b1458fb61cdaf3cb 572 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 456 5.4E-56 T 13-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 COP00_01540 3fc970f6031e68a9b1458fb61cdaf3cb 572 PIRSF PIRSF001535 1 569 1.0E-262 T 13-10-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 COP00_01540 3fc970f6031e68a9b1458fb61cdaf3cb 572 Gene3D G3DSA:3.40.50.800 3 550 2.0E-258 T 13-10-2018 IPR036621 Anticodon-binding domain superfamily COP00_01540 3fc970f6031e68a9b1458fb61cdaf3cb 572 Gene3D G3DSA:3.30.930.10 11 462 2.0E-258 T 13-10-2018 COP00_01540 3fc970f6031e68a9b1458fb61cdaf3cb 572 Pfam PF04073 Aminoacyl-tRNA editing domain 257 371 2.3E-32 T 13-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 COP00_01540 3fc970f6031e68a9b1458fb61cdaf3cb 572 SUPERFAMILY SSF52954 460 568 6.54E-28 T 13-10-2018 COP00_01540 3fc970f6031e68a9b1458fb61cdaf3cb 572 Pfam PF03129 Anticodon binding domain 474 563 9.1E-18 T 13-10-2018 IPR004154 Anticodon-binding COP00_01540 3fc970f6031e68a9b1458fb61cdaf3cb 572 Gene3D G3DSA:3.90.960.10 240 386 2.0E-258 T 13-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 COP00_01540 3fc970f6031e68a9b1458fb61cdaf3cb 572 SUPERFAMILY SSF55826 218 386 6.02E-39 T 13-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 COP00_00465 89bd70d1c244c4081eb627e83ff0a54a 186 Gene3D G3DSA:2.10.109.10 63 186 2.1E-38 T 13-10-2018 COP00_00465 89bd70d1c244c4081eb627e83ff0a54a 186 ProSitePatterns PS00501 Signal peptidases I serine active site. 42 49 - T 13-10-2018 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 COP00_00465 89bd70d1c244c4081eb627e83ff0a54a 186 ProSitePatterns PS00761 Signal peptidases I signature 3. 143 156 - T 13-10-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 COP00_00465 89bd70d1c244c4081eb627e83ff0a54a 186 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 138 157 4.5E-26 T 13-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 COP00_00465 89bd70d1c244c4081eb627e83ff0a54a 186 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 33 49 4.5E-26 T 13-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 COP00_00465 89bd70d1c244c4081eb627e83ff0a54a 186 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 84 96 4.5E-26 T 13-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 COP00_00465 89bd70d1c244c4081eb627e83ff0a54a 186 ProSitePatterns PS00760 Signal peptidases I lysine active site. 86 98 - T 13-10-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 COP00_00465 89bd70d1c244c4081eb627e83ff0a54a 186 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 16 180 4.7E-55 T 13-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 COP00_00465 89bd70d1c244c4081eb627e83ff0a54a 186 Pfam PF00717 Peptidase S24-like 40 108 6.3E-19 T 13-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C COP00_00465 89bd70d1c244c4081eb627e83ff0a54a 186 SUPERFAMILY SSF51306 31 183 1.62E-49 T 13-10-2018 IPR036286 LexA/Signal peptidase-like superfamily COP00_04445 7db884f5553bd46e4acb9ef1b0597c27 264 Gene3D G3DSA:3.60.15.10 28 263 2.7E-80 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like COP00_04445 7db884f5553bd46e4acb9ef1b0597c27 264 SMART SM00849 73 244 1.1E-22 T 13-10-2018 IPR001279 Metallo-beta-lactamase COP00_04445 7db884f5553bd46e4acb9ef1b0597c27 264 ProSitePatterns PS00744 Beta-lactamases class B signature 2. 193 205 - T 13-10-2018 IPR001018 Beta-lactamase, class-B, conserved site GO:0008270|GO:0008800|GO:0017001 COP00_04445 7db884f5553bd46e4acb9ef1b0597c27 264 SUPERFAMILY SSF56281 51 259 1.1E-39 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like COP00_04445 7db884f5553bd46e4acb9ef1b0597c27 264 Pfam PF00753 Metallo-beta-lactamase superfamily 74 244 1.5E-8 T 13-10-2018 IPR001279 Metallo-beta-lactamase COP00_23800 6fc73833870e46c4fd11f78980ff4af8 599 Pfam PF01839 FG-GAP repeat 323 349 5.8E-5 T 13-10-2018 IPR013517 FG-GAP repeat Reactome: R-HSA-216083 COP00_23800 6fc73833870e46c4fd11f78980ff4af8 599 SUPERFAMILY SSF69318 99 543 4.71E-16 T 13-10-2018 COP00_23800 6fc73833870e46c4fd11f78980ff4af8 599 Gene3D G3DSA:2.60.40.10 1 86 1.3E-27 T 13-10-2018 IPR013783 Immunoglobulin-like fold COP00_20525 79e6b4d0adfdafda5bd892b8daabfb05 300 TIGRFAM TIGR00294 TIGR00294: GTP cyclohydrolase 6 294 4.0E-70 T 13-10-2018 IPR003801 GTP cyclohydrolase FolE2/MptA GO:0003933 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852 COP00_20525 79e6b4d0adfdafda5bd892b8daabfb05 300 Pfam PF02649 Type I GTP cyclohydrolase folE2 34 293 2.3E-73 T 13-10-2018 IPR003801 GTP cyclohydrolase FolE2/MptA GO:0003933 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852 COP00_20525 79e6b4d0adfdafda5bd892b8daabfb05 300 Hamap MF_01527_B GTP cyclohydrolase FolE2 [folE2]. 34 298 31.428 T 13-10-2018 IPR022838 GTP cyclohydrolase FolE2 GO:0003934|GO:0035998 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852 COP00_20525 79e6b4d0adfdafda5bd892b8daabfb05 300 Gene3D G3DSA:3.10.270.10 31 298 4.7E-75 T 13-10-2018 COP00_23495 c7e94c55da85fe504b4d0e0a0734551c 854 SUPERFAMILY SSF51126 118 407 1.08E-33 T 13-10-2018 IPR011050 Pectin lyase fold/virulence factor COP00_23495 c7e94c55da85fe504b4d0e0a0734551c 854 Pfam PF11962 Peptidase_G2, IMC autoproteolytic cleavage domain 632 850 2.0E-77 T 13-10-2018 IPR021865 Peptidase G2, IMC autoproteolytic cleavage domain COP00_23495 c7e94c55da85fe504b4d0e0a0734551c 854 Gene3D G3DSA:2.160.20.10 107 566 1.4E-126 T 13-10-2018 IPR012334 Pectin lyase fold COP00_23495 c7e94c55da85fe504b4d0e0a0734551c 854 Pfam PF12708 Pectate lyase superfamily protein 120 344 1.3E-16 T 13-10-2018 IPR024535 Pectate lyase superfamily protein COP00_23495 c7e94c55da85fe504b4d0e0a0734551c 854 SMART SM00710 299 331 950.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat COP00_23495 c7e94c55da85fe504b4d0e0a0734551c 854 SMART SM00710 276 298 80.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat COP00_23495 c7e94c55da85fe504b4d0e0a0734551c 854 SMART SM00710 333 354 580.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat COP00_23495 c7e94c55da85fe504b4d0e0a0734551c 854 SMART SM00710 458 480 100.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat COP00_23495 c7e94c55da85fe504b4d0e0a0734551c 854 SMART SM00710 487 509 1300.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat COP00_23495 c7e94c55da85fe504b4d0e0a0734551c 854 SMART SM00710 238 260 1700.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat COP00_23495 c7e94c55da85fe504b4d0e0a0734551c 854 Gene3D G3DSA:4.10.80.40 740 778 2.0E-65 T 13-10-2018 COP00_23495 c7e94c55da85fe504b4d0e0a0734551c 854 Gene3D G3DSA:2.40.300.10 687 849 2.0E-65 T 13-10-2018 COP00_22470 d05e616d660fd39d51363e1f12e06b85 1230 Gene3D G3DSA:3.40.50.300 257 473 2.5E-32 T 13-10-2018 COP00_22470 d05e616d660fd39d51363e1f12e06b85 1230 Gene3D G3DSA:3.40.50.300 2 187 3.2E-41 T 13-10-2018 COP00_22470 d05e616d660fd39d51363e1f12e06b85 1230 SUPERFAMILY SSF52540 6 884 1.27E-119 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_22470 d05e616d660fd39d51363e1f12e06b85 1230 Pfam PF00580 UvrD/REP helicase N-terminal domain 11 460 6.7E-98 T 13-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 COP00_22470 d05e616d660fd39d51363e1f12e06b85 1230 Pfam PF13361 UvrD-like helicase C-terminal domain 471 879 8.6E-34 T 13-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 COP00_22470 d05e616d660fd39d51363e1f12e06b85 1230 Gene3D G3DSA:3.90.320.10 987 1230 1.6E-88 T 13-10-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal COP00_22470 d05e616d660fd39d51363e1f12e06b85 1230 TIGRFAM TIGR02785 addA_Gpos: helicase-exonuclease AddAB, AddA subunit 10 1228 0.0 T 13-10-2018 IPR014152 DNA helicase subunit AddA GO:0004003|GO:0006302 COP00_22470 d05e616d660fd39d51363e1f12e06b85 1230 Gene3D G3DSA:3.40.50.300 755 955 4.1E-50 T 13-10-2018 COP00_22470 d05e616d660fd39d51363e1f12e06b85 1230 Gene3D G3DSA:3.40.50.300 474 754 4.2E-62 T 13-10-2018 COP00_22470 d05e616d660fd39d51363e1f12e06b85 1230 SUPERFAMILY SSF52980 1010 1228 2.84E-44 T 13-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 COP00_22470 d05e616d660fd39d51363e1f12e06b85 1230 Pfam PF12705 PD-(D/E)XK nuclease superfamily 1050 1222 2.0E-10 T 13-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type COP00_22470 d05e616d660fd39d51363e1f12e06b85 1230 Hamap MF_01451 ATP-dependent helicase/nuclease subunit A [addA]. 8 1230 20.187 T 13-10-2018 IPR014152 DNA helicase subunit AddA GO:0004003|GO:0006302 COP00_00715 75d0ee42fbcfb12f0b68d319107a96e2 119 Pfam PF08868 YugN-like family 5 93 1.4E-14 T 13-10-2018 IPR014967 Uncharacterised protein family, YugN-like COP00_00715 75d0ee42fbcfb12f0b68d319107a96e2 119 Gene3D G3DSA:3.30.310.100 1 119 1.2E-45 T 13-10-2018 IPR036491 YugN-like superfamily COP00_00715 75d0ee42fbcfb12f0b68d319107a96e2 119 SUPERFAMILY SSF160755 1 114 1.15E-40 T 13-10-2018 IPR036491 YugN-like superfamily COP00_10780 0f9e7f0a8a0188b0f4bd0e33ccd32db6 335 TIGRFAM TIGR02905 spore_yutH: spore coat protein YutH 4 311 1.3E-130 T 13-10-2018 IPR014254 Spore coat protein YutH COP00_10780 0f9e7f0a8a0188b0f4bd0e33ccd32db6 335 Gene3D G3DSA:3.90.1200.10 100 302 1.0E-23 T 13-10-2018 COP00_10780 0f9e7f0a8a0188b0f4bd0e33ccd32db6 335 SUPERFAMILY SSF56112 40 174 3.83E-7 T 13-10-2018 IPR011009 Protein kinase-like domain superfamily COP00_10780 0f9e7f0a8a0188b0f4bd0e33ccd32db6 335 SUPERFAMILY SSF56112 216 314 4.85E-5 T 13-10-2018 IPR011009 Protein kinase-like domain superfamily COP00_10620 b35f99f0712003540f97fc674a1d7ba3 379 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 140 352 2.4E-83 T 13-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain COP00_10620 b35f99f0712003540f97fc674a1d7ba3 379 SMART SM01003 4 136 9.8E-77 T 13-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal COP00_10620 b35f99f0712003540f97fc674a1d7ba3 379 PIRSF PIRSF000183 1 371 6.7E-189 T 13-10-2018 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 COP00_10620 b35f99f0712003540f97fc674a1d7ba3 379 TIGRFAM TIGR00518 alaDH: alanine dehydrogenase 1 369 6.4E-191 T 13-10-2018 IPR008141 Alanine dehydrogenase GO:0000286|GO:0042853 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1 COP00_10620 b35f99f0712003540f97fc674a1d7ba3 379 SUPERFAMILY SSF52283 1 360 2.13E-65 T 13-10-2018 COP00_10620 b35f99f0712003540f97fc674a1d7ba3 379 SUPERFAMILY SSF51735 136 303 9.01E-49 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily COP00_10620 b35f99f0712003540f97fc674a1d7ba3 379 Gene3D G3DSA:3.40.50.720 3 353 2.0E-139 T 13-10-2018 COP00_10620 b35f99f0712003540f97fc674a1d7ba3 379 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 136 7.1E-48 T 13-10-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal COP00_10620 b35f99f0712003540f97fc674a1d7ba3 379 Gene3D G3DSA:3.40.50.720 129 305 2.0E-139 T 13-10-2018 COP00_10620 b35f99f0712003540f97fc674a1d7ba3 379 SMART SM01002 148 297 2.0E-88 T 13-10-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain COP00_10620 b35f99f0712003540f97fc674a1d7ba3 379 ProSitePatterns PS00837 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 2. 172 197 - T 13-10-2018 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 GO:0016491|GO:0055114 KEGG: 00250+1.4.1.1|KEGG: 00430+1.4.1.1|Reactome: R-HSA-71403 COP00_14915 fa5a31b4f8f8dce34a2b89bd332da0a2 414 SUPERFAMILY SSF55909 3 413 1.51E-133 T 13-10-2018 COP00_14915 fa5a31b4f8f8dce34a2b89bd332da0a2 414 Hamap MF_00242 Arginine deiminase [arcA]. 4 413 47.771 T 13-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 COP00_14915 fa5a31b4f8f8dce34a2b89bd332da0a2 414 Gene3D G3DSA:3.75.10.10 8 408 1.4E-162 T 13-10-2018 COP00_14915 fa5a31b4f8f8dce34a2b89bd332da0a2 414 PRINTS PR01466 Bacterial arginine deiminase signature 392 410 4.9E-58 T 13-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 COP00_14915 fa5a31b4f8f8dce34a2b89bd332da0a2 414 PRINTS PR01466 Bacterial arginine deiminase signature 5 25 4.9E-58 T 13-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 COP00_14915 fa5a31b4f8f8dce34a2b89bd332da0a2 414 PRINTS PR01466 Bacterial arginine deiminase signature 182 197 4.9E-58 T 13-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 COP00_14915 fa5a31b4f8f8dce34a2b89bd332da0a2 414 PRINTS PR01466 Bacterial arginine deiminase signature 369 383 4.9E-58 T 13-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 COP00_14915 fa5a31b4f8f8dce34a2b89bd332da0a2 414 PRINTS PR01466 Bacterial arginine deiminase signature 154 172 4.9E-58 T 13-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 COP00_14915 fa5a31b4f8f8dce34a2b89bd332da0a2 414 PRINTS PR01466 Bacterial arginine deiminase signature 349 366 4.9E-58 T 13-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 COP00_14915 fa5a31b4f8f8dce34a2b89bd332da0a2 414 Gene3D G3DSA:1.10.3930.10 71 154 1.4E-162 T 13-10-2018 COP00_14915 fa5a31b4f8f8dce34a2b89bd332da0a2 414 TIGRFAM TIGR01078 arcA: arginine deiminase 7 413 1.1E-163 T 13-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 COP00_14915 fa5a31b4f8f8dce34a2b89bd332da0a2 414 PIRSF PIRSF006356 1 413 4.9E-161 T 13-10-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 COP00_14915 fa5a31b4f8f8dce34a2b89bd332da0a2 414 Pfam PF02274 Amidinotransferase 21 410 1.2E-113 T 13-10-2018 COP00_17460 c102a4934e3c39b801380abdf20f325b 332 Gene3D G3DSA:3.90.180.10 17 319 7.1E-105 T 13-10-2018 COP00_17460 c102a4934e3c39b801380abdf20f325b 332 Pfam PF00107 Zinc-binding dehydrogenase 161 295 4.1E-17 T 13-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 COP00_17460 c102a4934e3c39b801380abdf20f325b 332 SUPERFAMILY SSF51735 122 298 1.71E-35 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily COP00_17460 c102a4934e3c39b801380abdf20f325b 332 SMART SM00829 19 330 2.9E-7 T 13-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 COP00_17460 c102a4934e3c39b801380abdf20f325b 332 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 37 95 4.3E-8 T 13-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 COP00_17460 c102a4934e3c39b801380abdf20f325b 332 SUPERFAMILY SSF50129 10 153 6.7E-34 T 13-10-2018 IPR011032 GroES-like superfamily COP00_17460 c102a4934e3c39b801380abdf20f325b 332 Gene3D G3DSA:3.40.50.720 144 269 7.1E-105 T 13-10-2018 COP00_17650 a346e02002d56bef9dac0e59a70dd1ba 253 Pfam PF10138 vWA found in TerF C terminus 24 221 2.2E-77 T 13-10-2018 IPR019303 vWA found in TerF C terminus COP00_17650 a346e02002d56bef9dac0e59a70dd1ba 253 SUPERFAMILY SSF53300 26 178 3.06E-10 T 13-10-2018 IPR036465 von Willebrand factor A-like domain superfamily COP00_17650 a346e02002d56bef9dac0e59a70dd1ba 253 SMART SM00327 24 193 4.0E-7 T 13-10-2018 IPR002035 von Willebrand factor, type A COP00_07235 656dda6a0dd6984b124a2468cc199c54 158 Gene3D G3DSA:3.40.390.30 2 158 6.6E-48 T 13-10-2018 IPR023091 Metalloprotease catalytic domain superfamily, predicted GO:0004222 COP00_07235 656dda6a0dd6984b124a2468cc199c54 158 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 4 156 24.635 T 13-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 COP00_07235 656dda6a0dd6984b124a2468cc199c54 158 Pfam PF02130 Uncharacterized protein family UPF0054 18 152 1.1E-48 T 13-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 COP00_07235 656dda6a0dd6984b124a2468cc199c54 158 SUPERFAMILY SSF55486 3 156 8.3E-47 T 13-10-2018 COP00_07235 656dda6a0dd6984b124a2468cc199c54 158 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 40 153 1.4E-42 T 13-10-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 COP00_07235 656dda6a0dd6984b124a2468cc199c54 158 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 122 132 - T 13-10-2018 IPR020549 Endoribonuclease YbeY, conserved site COP00_01765 1112678c475981258e7bccd0a07981d5 509 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 215 235 - T 13-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 COP00_01765 1112678c475981258e7bccd0a07981d5 509 SUPERFAMILY SSF102114 198 434 5.49E-65 T 13-10-2018 COP00_01765 1112678c475981258e7bccd0a07981d5 509 SMART SM00729 211 429 5.3E-65 T 13-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 COP00_01765 1112678c475981258e7bccd0a07981d5 509 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 66 503 75.56 T 13-10-2018 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 COP00_01765 1112678c475981258e7bccd0a07981d5 509 Gene3D G3DSA:3.40.50.12160 66 201 1.9E-35 T 13-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily COP00_01765 1112678c475981258e7bccd0a07981d5 509 Pfam PF04055 Radical SAM superfamily 215 386 5.0E-35 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 COP00_01765 1112678c475981258e7bccd0a07981d5 509 Pfam PF00919 Uncharacterized protein family UPF0004 67 168 1.7E-29 T 13-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 COP00_01765 1112678c475981258e7bccd0a07981d5 509 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 67 502 3.2E-218 T 13-10-2018 COP00_01765 1112678c475981258e7bccd0a07981d5 509 Pfam PF01938 TRAM domain 441 502 5.1E-17 T 13-10-2018 IPR002792 TRAM domain COP00_01765 1112678c475981258e7bccd0a07981d5 509 Gene3D G3DSA:3.80.30.20 209 443 3.1E-92 T 13-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe COP00_01765 1112678c475981258e7bccd0a07981d5 509 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 67 499 3.9E-167 T 13-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 COP00_12835 d4d1e818e13f8e2136e8a5d84c45181c 316 Gene3D G3DSA:3.50.50.60 117 240 1.8E-115 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily COP00_12835 d4d1e818e13f8e2136e8a5d84c45181c 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 143 167 4.4E-71 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 COP00_12835 d4d1e818e13f8e2136e8a5d84c45181c 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 8 30 4.4E-71 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 COP00_12835 d4d1e818e13f8e2136e8a5d84c45181c 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 41 56 4.4E-71 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 COP00_12835 d4d1e818e13f8e2136e8a5d84c45181c 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 268 286 4.4E-71 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 COP00_12835 d4d1e818e13f8e2136e8a5d84c45181c 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 234 255 4.4E-71 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 COP00_12835 d4d1e818e13f8e2136e8a5d84c45181c 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 195 211 4.4E-71 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 COP00_12835 d4d1e818e13f8e2136e8a5d84c45181c 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 106 114 4.4E-71 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 COP00_12835 d4d1e818e13f8e2136e8a5d84c45181c 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 61 71 4.4E-71 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 COP00_12835 d4d1e818e13f8e2136e8a5d84c45181c 316 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 128 140 4.4E-71 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 COP00_12835 d4d1e818e13f8e2136e8a5d84c45181c 316 Gene3D G3DSA:3.50.50.60 8 301 1.8E-115 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily COP00_12835 d4d1e818e13f8e2136e8a5d84c45181c 316 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 135 155 - T 13-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 COP00_12835 d4d1e818e13f8e2136e8a5d84c45181c 316 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 294 5.2E-51 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 COP00_12835 d4d1e818e13f8e2136e8a5d84c45181c 316 SUPERFAMILY SSF51905 4 302 1.57E-55 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily COP00_12835 d4d1e818e13f8e2136e8a5d84c45181c 316 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 147 165 1.0E-35 T 13-10-2018 COP00_12835 d4d1e818e13f8e2136e8a5d84c45181c 316 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 258 280 1.0E-35 T 13-10-2018 COP00_12835 d4d1e818e13f8e2136e8a5d84c45181c 316 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 1.0E-35 T 13-10-2018 COP00_12835 d4d1e818e13f8e2136e8a5d84c45181c 316 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 105 123 1.0E-35 T 13-10-2018 COP00_12835 d4d1e818e13f8e2136e8a5d84c45181c 316 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 232 248 1.0E-35 T 13-10-2018 COP00_12835 d4d1e818e13f8e2136e8a5d84c45181c 316 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 7 305 4.2E-122 T 13-10-2018 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00450+1.8.1.9 COP00_09465 b4a57195b2f8186964743616a748d886 190 Gene3D G3DSA:3.90.1140.10 6 189 7.6E-37 T 13-10-2018 COP00_09465 b4a57195b2f8186964743616a748d886 190 SUPERFAMILY SSF55144 5 182 6.28E-38 T 13-10-2018 IPR009097 Cyclic phosphodiesterase COP00_09465 b4a57195b2f8186964743616a748d886 190 TIGRFAM TIGR02258 2_5_ligase: 2'-5' RNA ligase 6 179 1.4E-40 T 13-10-2018 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 COP00_09465 b4a57195b2f8186964743616a748d886 190 Pfam PF13563 2'-5' RNA ligase superfamily 31 161 1.5E-17 T 13-10-2018 COP00_09465 b4a57195b2f8186964743616a748d886 190 Hamap MF_01940 RNA 2',3'-cyclic phosphodiesterase [thpR]. 5 181 19.747 T 13-10-2018 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 COP00_17080 8dcf1ebe3fce02d23f402a767bebfb7b 189 Pfam PF13302 Acetyltransferase (GNAT) domain 8 146 3.9E-27 T 13-10-2018 IPR000182 GNAT domain COP00_17080 8dcf1ebe3fce02d23f402a767bebfb7b 189 Gene3D G3DSA:3.40.630.30 2 182 2.4E-50 T 13-10-2018 COP00_17080 8dcf1ebe3fce02d23f402a767bebfb7b 189 SUPERFAMILY SSF55729 2 171 3.78E-45 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase COP00_03635 2433aeea4bbe9ee8e1a2a0ae30fbd5ca 124 Gene3D G3DSA:2.60.40.790 28 110 2.6E-9 T 13-10-2018 IPR008978 HSP20-like chaperone COP00_03635 2433aeea4bbe9ee8e1a2a0ae30fbd5ca 124 SUPERFAMILY SSF49764 28 112 1.43E-6 T 13-10-2018 IPR008978 HSP20-like chaperone COP00_20570 cb03f2b680ec0f3a5c18f209924fc52e 395 PRINTS PR00359 B-class P450 signature 287 314 6.7E-51 T 13-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 COP00_20570 cb03f2b680ec0f3a5c18f209924fc52e 395 PRINTS PR00359 B-class P450 signature 87 98 6.7E-51 T 13-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 COP00_20570 cb03f2b680ec0f3a5c18f209924fc52e 395 PRINTS PR00359 B-class P450 signature 133 149 6.7E-51 T 13-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 COP00_20570 cb03f2b680ec0f3a5c18f209924fc52e 395 PRINTS PR00359 B-class P450 signature 345 356 6.7E-51 T 13-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 COP00_20570 cb03f2b680ec0f3a5c18f209924fc52e 395 PRINTS PR00359 B-class P450 signature 336 345 6.7E-51 T 13-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 COP00_20570 cb03f2b680ec0f3a5c18f209924fc52e 395 PRINTS PR00359 B-class P450 signature 270 281 6.7E-51 T 13-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 COP00_20570 cb03f2b680ec0f3a5c18f209924fc52e 395 PRINTS PR00359 B-class P450 signature 193 215 6.7E-51 T 13-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 COP00_20570 cb03f2b680ec0f3a5c18f209924fc52e 395 PRINTS PR00359 B-class P450 signature 150 165 6.7E-51 T 13-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 COP00_20570 cb03f2b680ec0f3a5c18f209924fc52e 395 PRINTS PR00359 B-class P450 signature 315 330 6.7E-51 T 13-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 COP00_20570 cb03f2b680ec0f3a5c18f209924fc52e 395 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 338 347 - T 13-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 COP00_20570 cb03f2b680ec0f3a5c18f209924fc52e 395 Pfam PF00067 Cytochrome P450 16 365 1.2E-32 T 13-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 COP00_20570 cb03f2b680ec0f3a5c18f209924fc52e 395 Gene3D G3DSA:1.10.630.10 2 395 4.9E-123 T 13-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 COP00_20570 cb03f2b680ec0f3a5c18f209924fc52e 395 SUPERFAMILY SSF48264 6 394 7.07E-92 T 13-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 COP00_20570 cb03f2b680ec0f3a5c18f209924fc52e 395 PRINTS PR00385 P450 superfamily signature 345 356 3.8E-6 T 13-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 COP00_20570 cb03f2b680ec0f3a5c18f209924fc52e 395 PRINTS PR00385 P450 superfamily signature 235 252 3.8E-6 T 13-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 COP00_20570 cb03f2b680ec0f3a5c18f209924fc52e 395 PRINTS PR00385 P450 superfamily signature 270 281 3.8E-6 T 13-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 COP00_20570 cb03f2b680ec0f3a5c18f209924fc52e 395 PRINTS PR00385 P450 superfamily signature 336 345 3.8E-6 T 13-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 COP00_00965 6b6f9d2977f5f9c4459828930644595b 918 SUPERFAMILY SSF52374 1 640 2.1E-153 T 13-10-2018 COP00_00965 6b6f9d2977f5f9c4459828930644595b 918 Pfam PF06827 Zinc finger found in FPG and IleRS 884 912 7.6E-9 T 13-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 COP00_00965 6b6f9d2977f5f9c4459828930644595b 918 Gene3D G3DSA:3.90.740.10 194 398 2.7E-260 T 13-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 COP00_00965 6b6f9d2977f5f9c4459828930644595b 918 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 27 633 2.9E-219 T 13-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 COP00_00965 6b6f9d2977f5f9c4459828930644595b 918 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 1 915 20.914 T 13-10-2018 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-379726 COP00_00965 6b6f9d2977f5f9c4459828930644595b 918 Gene3D G3DSA:1.10.730.20 632 917 1.0E-98 T 13-10-2018 COP00_00965 6b6f9d2977f5f9c4459828930644595b 918 SUPERFAMILY SSF50677 203 393 3.92E-63 T 13-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 COP00_00965 6b6f9d2977f5f9c4459828930644595b 918 SUPERFAMILY SSF47323 644 915 7.1E-77 T 13-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 COP00_00965 6b6f9d2977f5f9c4459828930644595b 918 Gene3D G3DSA:3.40.50.620 24 621 2.7E-260 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold COP00_00965 6b6f9d2977f5f9c4459828930644595b 918 Pfam PF08264 Anticodon-binding domain of tRNA 677 829 8.5E-31 T 13-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 COP00_00965 6b6f9d2977f5f9c4459828930644595b 918 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 57 68 - T 13-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 COP00_00965 6b6f9d2977f5f9c4459828930644595b 918 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 14 832 0.0 T 13-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 COP00_00965 6b6f9d2977f5f9c4459828930644595b 918 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 519 532 1.2E-32 T 13-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 COP00_00965 6b6f9d2977f5f9c4459828930644595b 918 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 391 406 1.2E-32 T 13-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 COP00_00965 6b6f9d2977f5f9c4459828930644595b 918 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 50 61 1.2E-32 T 13-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 COP00_00965 6b6f9d2977f5f9c4459828930644595b 918 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 553 562 1.2E-32 T 13-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 COP00_00965 6b6f9d2977f5f9c4459828930644595b 918 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 229 252 1.2E-32 T 13-10-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 COP00_14635 1040c8caabdb52ecd5ab6a7c03fd7dca 571 SUPERFAMILY SSF90123 3 319 6.67E-83 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 COP00_14635 1040c8caabdb52ecd5ab6a7c03fd7dca 571 Gene3D G3DSA:3.40.50.300 325 571 3.2E-94 T 13-10-2018 COP00_14635 1040c8caabdb52ecd5ab6a7c03fd7dca 571 Gene3D G3DSA:1.20.1560.10 1 315 3.6E-87 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 COP00_14635 1040c8caabdb52ecd5ab6a7c03fd7dca 571 ProSitePatterns PS00211 ABC transporters family signature. 470 484 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 COP00_14635 1040c8caabdb52ecd5ab6a7c03fd7dca 571 SMART SM00382 358 530 4.7E-16 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_14635 1040c8caabdb52ecd5ab6a7c03fd7dca 571 SUPERFAMILY SSF52540 322 569 5.89E-94 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_14635 1040c8caabdb52ecd5ab6a7c03fd7dca 571 Pfam PF00005 ABC transporter 349 498 6.7E-34 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 COP00_14635 1040c8caabdb52ecd5ab6a7c03fd7dca 571 Pfam PF00664 ABC transporter transmembrane region 17 286 4.2E-58 T 13-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 COP00_07405 c34e73ed19e34fd60b691c05fbef6c07 189 Gene3D G3DSA:3.40.50.620 1 188 3.3E-66 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold COP00_07405 c34e73ed19e34fd60b691c05fbef6c07 189 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 2 188 32.323 T 13-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 COP00_07405 c34e73ed19e34fd60b691c05fbef6c07 189 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 4 68 3.7E-14 T 13-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 COP00_07405 c34e73ed19e34fd60b691c05fbef6c07 189 Pfam PF01467 Cytidylyltransferase-like 6 162 1.6E-34 T 13-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 COP00_07405 c34e73ed19e34fd60b691c05fbef6c07 189 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 6 187 7.0E-59 T 13-10-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 COP00_07405 c34e73ed19e34fd60b691c05fbef6c07 189 SUPERFAMILY SSF52374 1 187 5.32E-55 T 13-10-2018 COP00_15060 d58d79ccb1dc87c80521af2f6d141ddb 434 Pfam PF03600 Citrate transporter 13 380 2.3E-53 T 13-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 COP00_15060 d58d79ccb1dc87c80521af2f6d141ddb 434 TIGRFAM TIGR00784 citMHS: citrate transporter 1 434 5.4E-223 T 13-10-2018 IPR014738 Citrate transporter GO:0015137|GO:0015746 COP00_20340 f4639ce6511a52cee3e0e7f830257a6e 1047 SUPERFAMILY SSF82866 817 1040 3.01E-48 T 13-10-2018 COP00_20340 f4639ce6511a52cee3e0e7f830257a6e 1047 SUPERFAMILY SSF82693 41 133 1.31E-20 T 13-10-2018 COP00_20340 f4639ce6511a52cee3e0e7f830257a6e 1047 SUPERFAMILY SSF82693 134 339 7.15E-17 T 13-10-2018 COP00_20340 f4639ce6511a52cee3e0e7f830257a6e 1047 SUPERFAMILY SSF82714 186 248 3.27E-5 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains COP00_20340 f4639ce6511a52cee3e0e7f830257a6e 1047 PRINTS PR00702 Acriflavin resistance protein family signature 39 57 4.5E-46 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 COP00_20340 f4639ce6511a52cee3e0e7f830257a6e 1047 PRINTS PR00702 Acriflavin resistance protein family signature 468 491 4.5E-46 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 COP00_20340 f4639ce6511a52cee3e0e7f830257a6e 1047 PRINTS PR00702 Acriflavin resistance protein family signature 570 587 4.5E-46 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 COP00_20340 f4639ce6511a52cee3e0e7f830257a6e 1047 PRINTS PR00702 Acriflavin resistance protein family signature 11 35 4.5E-46 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 COP00_20340 f4639ce6511a52cee3e0e7f830257a6e 1047 PRINTS PR00702 Acriflavin resistance protein family signature 357 380 4.5E-46 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 COP00_20340 f4639ce6511a52cee3e0e7f830257a6e 1047 PRINTS PR00702 Acriflavin resistance protein family signature 493 516 4.5E-46 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 COP00_20340 f4639ce6511a52cee3e0e7f830257a6e 1047 PRINTS PR00702 Acriflavin resistance protein family signature 384 405 4.5E-46 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 COP00_20340 f4639ce6511a52cee3e0e7f830257a6e 1047 PRINTS PR00702 Acriflavin resistance protein family signature 412 436 4.5E-46 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 COP00_20340 f4639ce6511a52cee3e0e7f830257a6e 1047 SUPERFAMILY SSF82714 731 814 6.54E-13 T 13-10-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains COP00_20340 f4639ce6511a52cee3e0e7f830257a6e 1047 SUPERFAMILY SSF82866 318 519 9.81E-44 T 13-10-2018 COP00_20340 f4639ce6511a52cee3e0e7f830257a6e 1047 Pfam PF00873 AcrB/AcrD/AcrF family 4 247 6.7E-44 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 COP00_20340 f4639ce6511a52cee3e0e7f830257a6e 1047 Pfam PF00873 AcrB/AcrD/AcrF family 279 1034 5.6E-164 T 13-10-2018 IPR001036 Acriflavin resistance protein GO:0016020|GO:0022857|GO:0055085 COP00_16880 e9324f2b45fcc5bbff3978aa01d34f7f 356 ProSitePatterns PS01215 Mrp family signature. 214 230 - T 13-10-2018 IPR000808 Mrp, conserved site GO:0005524 COP00_16880 e9324f2b45fcc5bbff3978aa01d34f7f 356 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 112 348 6.1E-84 T 13-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 COP00_16880 e9324f2b45fcc5bbff3978aa01d34f7f 356 Gene3D G3DSA:3.40.50.300 105 326 3.5E-68 T 13-10-2018 COP00_16880 e9324f2b45fcc5bbff3978aa01d34f7f 356 SUPERFAMILY SSF52540 112 352 1.41E-48 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_16880 e9324f2b45fcc5bbff3978aa01d34f7f 356 Hamap MF_02040 Iron-sulfur cluster carrier protein. 101 349 33.457 T 13-10-2018 IPR019591 Mrp/NBP35 ATP-binding protein COP00_00860 d31c2b793ed30e6ce9213f4fd48ace70 303 Pfam PF01565 FAD binding domain 35 164 1.4E-23 T 13-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 COP00_00860 d31c2b793ed30e6ce9213f4fd48ace70 303 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 201 299 2.0E-28 T 13-10-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 COP00_00860 d31c2b793ed30e6ce9213f4fd48ace70 303 SUPERFAMILY SSF56176 4 193 2.66E-42 T 13-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 COP00_00860 d31c2b793ed30e6ce9213f4fd48ace70 303 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 303 88.512 T 13-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 COP00_00860 d31c2b793ed30e6ce9213f4fd48ace70 303 Gene3D G3DSA:3.90.78.10 217 303 3.2E-36 T 13-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 COP00_00860 d31c2b793ed30e6ce9213f4fd48ace70 303 SUPERFAMILY SSF56194 197 301 3.66E-36 T 13-10-2018 IPR036635 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain superfamily GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 COP00_00860 d31c2b793ed30e6ce9213f4fd48ace70 303 Gene3D G3DSA:3.30.43.10 1 88 9.4E-31 T 13-10-2018 IPR016167 FAD-binding, type PCMH, subdomain 1 COP00_00860 d31c2b793ed30e6ce9213f4fd48ace70 303 Gene3D G3DSA:3.30.465.10 89 216 4.5E-49 T 13-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 COP00_00860 d31c2b793ed30e6ce9213f4fd48ace70 303 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 22 300 1.8E-106 T 13-10-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 COP00_05530 e77705c608e5ab0e70052580c1e3fe6a 327 Pfam PF03099 Biotin/lipoate A/B protein ligase family 90 214 1.3E-20 T 13-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 COP00_05530 e77705c608e5ab0e70052580c1e3fe6a 327 SUPERFAMILY SSF55681 72 277 9.11E-62 T 13-10-2018 COP00_05530 e77705c608e5ab0e70052580c1e3fe6a 327 SUPERFAMILY SSF46785 3 60 2.52E-9 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_05530 e77705c608e5ab0e70052580c1e3fe6a 327 SUPERFAMILY SSF50037 285 324 9.16E-5 T 13-10-2018 IPR008988 Transcriptional repressor, C-terminal COP00_05530 e77705c608e5ab0e70052580c1e3fe6a 327 Gene3D G3DSA:2.30.30.100 283 325 1.9E-7 T 13-10-2018 COP00_05530 e77705c608e5ab0e70052580c1e3fe6a 327 Pfam PF08279 HTH domain 6 60 3.3E-16 T 13-10-2018 IPR013196 Helix-turn-helix, type 11 COP00_05530 e77705c608e5ab0e70052580c1e3fe6a 327 Gene3D G3DSA:3.30.930.10 68 277 2.1E-68 T 13-10-2018 COP00_05530 e77705c608e5ab0e70052580c1e3fe6a 327 Gene3D G3DSA:1.10.10.10 2 64 4.7E-20 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_05530 e77705c608e5ab0e70052580c1e3fe6a 327 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 86 323 4.2E-78 T 13-10-2018 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 COP00_05530 e77705c608e5ab0e70052580c1e3fe6a 327 TIGRFAM TIGR00122 birA_repr_reg: biotin operon repressor 9 77 1.1E-21 T 13-10-2018 IPR004409 Biotin operon repressor, helix-turn-helix domain GO:0006355 KEGG: 00780+6.3.4.15 COP00_05530 e77705c608e5ab0e70052580c1e3fe6a 327 Hamap MF_00978 Bifunctional ligase/repressor BirA [birA]. 8 325 37.961 T 13-10-2018 IPR030855 Bifunctional ligase/repressor BirA GO:0004077|GO:0006355 KEGG: 00780+6.3.4.15 COP00_05530 e77705c608e5ab0e70052580c1e3fe6a 327 Pfam PF02237 Biotin protein ligase C terminal domain 285 324 5.6E-10 T 13-10-2018 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780|Reactome: R-HSA-3371599 COP00_01005 4104e5dc4940905b0943b525a2b78935 364 Gene3D G3DSA:3.40.50.880 170 349 1.7E-35 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like COP00_01005 4104e5dc4940905b0943b525a2b78935 364 SUPERFAMILY SSF52317 147 351 2.02E-56 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like COP00_01005 4104e5dc4940905b0943b525a2b78935 364 SMART SM01097 1 131 5.8E-90 T 13-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 COP00_01005 4104e5dc4940905b0943b525a2b78935 364 Pfam PF00117 Glutamine amidotransferase class-I 174 348 1.8E-47 T 13-10-2018 IPR017926 Glutamine amidotransferase COP00_01005 4104e5dc4940905b0943b525a2b78935 364 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 4 351 1.9E-146 T 13-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 COP00_01005 4104e5dc4940905b0943b525a2b78935 364 SUPERFAMILY SSF52021 1 145 3.4E-58 T 13-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 COP00_01005 4104e5dc4940905b0943b525a2b78935 364 PRINTS PR00097 Anthranilate synthase component II signature 214 223 1.7E-6 T 13-10-2018 COP00_01005 4104e5dc4940905b0943b525a2b78935 364 PRINTS PR00097 Anthranilate synthase component II signature 241 252 1.7E-6 T 13-10-2018 COP00_01005 4104e5dc4940905b0943b525a2b78935 364 PRINTS PR00097 Anthranilate synthase component II signature 325 338 1.7E-6 T 13-10-2018 COP00_01005 4104e5dc4940905b0943b525a2b78935 364 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 1 354 48.871 T 13-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 COP00_01005 4104e5dc4940905b0943b525a2b78935 364 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 3 129 2.5E-53 T 13-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 COP00_01005 4104e5dc4940905b0943b525a2b78935 364 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 283 294 2.4E-37 T 13-10-2018 COP00_01005 4104e5dc4940905b0943b525a2b78935 364 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 241 257 2.4E-37 T 13-10-2018 COP00_01005 4104e5dc4940905b0943b525a2b78935 364 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 211 225 2.4E-37 T 13-10-2018 COP00_01005 4104e5dc4940905b0943b525a2b78935 364 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 172 186 2.4E-37 T 13-10-2018 COP00_01005 4104e5dc4940905b0943b525a2b78935 364 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 258 275 2.4E-37 T 13-10-2018 COP00_01005 4104e5dc4940905b0943b525a2b78935 364 PRINTS PR00096 Glutamine amidotransferase superfamily signature 325 338 9.8E-12 T 13-10-2018 COP00_01005 4104e5dc4940905b0943b525a2b78935 364 PRINTS PR00096 Glutamine amidotransferase superfamily signature 214 223 9.8E-12 T 13-10-2018 COP00_01005 4104e5dc4940905b0943b525a2b78935 364 PRINTS PR00096 Glutamine amidotransferase superfamily signature 241 252 9.8E-12 T 13-10-2018 COP00_01005 4104e5dc4940905b0943b525a2b78935 364 Gene3D G3DSA:3.50.30.20 1 148 3.1E-57 T 13-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 COP00_01640 b72b62f9e504d08e7b05251acfc230dd 346 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 4 341 37.811 T 13-10-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 COP00_01640 b72b62f9e504d08e7b05251acfc230dd 346 SUPERFAMILY SSF51735 5 157 5.59E-49 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily COP00_01640 b72b62f9e504d08e7b05251acfc230dd 346 Gene3D G3DSA:3.40.50.720 7 338 2.4E-141 T 13-10-2018 COP00_01640 b72b62f9e504d08e7b05251acfc230dd 346 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 7 120 1.1E-33 T 13-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 COP00_01640 b72b62f9e504d08e7b05251acfc230dd 346 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 139 327 3.6E-59 T 13-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 COP00_01640 b72b62f9e504d08e7b05251acfc230dd 346 TIGRFAM TIGR01296 asd_B: aspartate-semialdehyde dehydrogenase 6 341 4.9E-162 T 13-10-2018 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 COP00_01640 b72b62f9e504d08e7b05251acfc230dd 346 Gene3D G3DSA:3.30.360.10 128 324 2.4E-141 T 13-10-2018 COP00_01640 b72b62f9e504d08e7b05251acfc230dd 346 PIRSF PIRSF000148 4 346 2.0E-129 T 13-10-2018 COP00_01640 b72b62f9e504d08e7b05251acfc230dd 346 SUPERFAMILY SSF55347 129 328 6.83E-75 T 13-10-2018 COP00_01640 b72b62f9e504d08e7b05251acfc230dd 346 SMART SM00859 6 121 6.3E-41 T 13-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 COP00_01640 b72b62f9e504d08e7b05251acfc230dd 346 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 237 251 - T 13-10-2018 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 COP00_17465 d67a5b947111eadf9f39b69d548b0321 516 SUPERFAMILY SSF103473 5 462 6.67E-24 T 13-10-2018 IPR036259 MFS transporter superfamily COP00_17465 d67a5b947111eadf9f39b69d548b0321 516 Pfam PF07690 Major Facilitator Superfamily 25 375 1.5E-18 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 COP00_02250 e393bb18f1b0f732ff47a7ad67cd7631 84 Pfam PF04531 Bacteriophage holin 4 83 6.4E-29 T 13-10-2018 IPR006485 Bacteriophage holin COP00_02250 e393bb18f1b0f732ff47a7ad67cd7631 84 TIGRFAM TIGR01598 holin_phiLC3: holin, phage phi LC3 family 4 82 5.4E-25 T 13-10-2018 IPR006485 Bacteriophage holin COP00_01080 e20b4137ff9e933ee29ab8e71fb6f2e3 890 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 655 667 1.7E-42 T 13-10-2018 COP00_01080 e20b4137ff9e933ee29ab8e71fb6f2e3 890 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 551 561 1.7E-42 T 13-10-2018 COP00_01080 e20b4137ff9e933ee29ab8e71fb6f2e3 890 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 631 650 1.7E-42 T 13-10-2018 COP00_01080 e20b4137ff9e933ee29ab8e71fb6f2e3 890 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 161 175 1.7E-42 T 13-10-2018 COP00_01080 e20b4137ff9e933ee29ab8e71fb6f2e3 890 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 324 338 1.7E-42 T 13-10-2018 COP00_01080 e20b4137ff9e933ee29ab8e71fb6f2e3 890 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 529 540 1.7E-42 T 13-10-2018 COP00_01080 e20b4137ff9e933ee29ab8e71fb6f2e3 890 SUPERFAMILY SSF81665 1 880 3.27E-133 T 13-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 COP00_01080 e20b4137ff9e933ee29ab8e71fb6f2e3 890 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 426 576 1.2E-20 T 13-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 COP00_01080 e20b4137ff9e933ee29ab8e71fb6f2e3 890 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 216 345 2.6E-28 T 13-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 COP00_01080 e20b4137ff9e933ee29ab8e71fb6f2e3 890 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 83 190 1.8E-20 T 13-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 COP00_01080 e20b4137ff9e933ee29ab8e71fb6f2e3 890 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 597 721 4.9E-38 T 13-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 COP00_01080 e20b4137ff9e933ee29ab8e71fb6f2e3 890 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 631 647 1.8E-17 T 13-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 COP00_01080 e20b4137ff9e933ee29ab8e71fb6f2e3 890 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 488 506 1.8E-17 T 13-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 COP00_01080 e20b4137ff9e933ee29ab8e71fb6f2e3 890 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 603 619 1.8E-17 T 13-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 COP00_01080 e20b4137ff9e933ee29ab8e71fb6f2e3 890 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 663 688 1.8E-17 T 13-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 COP00_01080 e20b4137ff9e933ee29ab8e71fb6f2e3 890 SMART SM00831 2 76 1.5E-25 T 13-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 COP00_01080 e20b4137ff9e933ee29ab8e71fb6f2e3 890 SUPERFAMILY SSF56784 322 735 1.04E-66 T 13-10-2018 IPR036412 HAD-like superfamily COP00_01080 e20b4137ff9e933ee29ab8e71fb6f2e3 890 Gene3D G3DSA:3.40.1110.10 334 536 0.0 T 13-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 COP00_01080 e20b4137ff9e933ee29ab8e71fb6f2e3 890 Pfam PF00689 Cation transporting ATPase, C-terminus 715 880 1.2E-52 T 13-10-2018 IPR006068 Cation-transporting P-type ATPase, C-terminal Reactome: R-HSA-936837 COP00_01080 e20b4137ff9e933ee29ab8e71fb6f2e3 890 SUPERFAMILY SSF81653 114 224 1.96E-31 T 13-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 COP00_01080 e20b4137ff9e933ee29ab8e71fb6f2e3 890 Gene3D G3DSA:1.20.1110.10 54 877 0.0 T 13-10-2018 COP00_01080 e20b4137ff9e933ee29ab8e71fb6f2e3 890 Pfam PF00122 E1-E2 ATPase 110 303 9.5E-55 T 13-10-2018 COP00_01080 e20b4137ff9e933ee29ab8e71fb6f2e3 890 Pfam PF00702 haloacid dehalogenase-like hydrolase 323 645 8.5E-27 T 13-10-2018 COP00_01080 e20b4137ff9e933ee29ab8e71fb6f2e3 890 TIGRFAM TIGR01116 ATPase-IIA1_Ca: calcium-translocating P-type ATPase, SERCA-type 54 881 8.0E-218 T 13-10-2018 IPR005782 P-type ATPase, subfamily IIA, SERCA-type GO:0005388|GO:0006816|GO:0016021 Reactome: R-HSA-1912420|Reactome: R-HSA-418359|Reactome: R-HSA-5578775|Reactome: R-HSA-936837 COP00_01080 e20b4137ff9e933ee29ab8e71fb6f2e3 890 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 326 332 - T 13-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 COP00_01080 e20b4137ff9e933ee29ab8e71fb6f2e3 890 Gene3D G3DSA:3.40.50.1000 321 676 0.0 T 13-10-2018 IPR023214 HAD superfamily COP00_01080 e20b4137ff9e933ee29ab8e71fb6f2e3 890 Gene3D G3DSA:2.70.150.10 16 227 0.0 T 13-10-2018 COP00_01080 e20b4137ff9e933ee29ab8e71fb6f2e3 890 SUPERFAMILY SSF81660 332 533 7.19E-58 T 13-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 COP00_01080 e20b4137ff9e933ee29ab8e71fb6f2e3 890 Pfam PF00690 Cation transporter/ATPase, N-terminus 3 71 2.0E-18 T 13-10-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 COP00_05760 368b4d10a6ae844cecdb3fe36cd3d26b 351 SUPERFAMILY SSF51395 24 348 9.16E-91 T 13-10-2018 COP00_05760 368b4d10a6ae844cecdb3fe36cd3d26b 351 TIGRFAM TIGR02151 IPP_isom_2: isopentenyl-diphosphate delta-isomerase, type 2 7 331 2.4E-120 T 13-10-2018 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 COP00_05760 368b4d10a6ae844cecdb3fe36cd3d26b 351 SMART SM01240 23 336 3.9E-5 T 13-10-2018 COP00_05760 368b4d10a6ae844cecdb3fe36cd3d26b 351 Pfam PF01070 FMN-dependent dehydrogenase 168 326 8.9E-20 T 13-10-2018 IPR000262 FMN-dependent dehydrogenase GO:0016491 Reactome: R-HSA-9033241 COP00_05760 368b4d10a6ae844cecdb3fe36cd3d26b 351 Gene3D G3DSA:3.20.20.70 4 351 3.8E-127 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 COP00_05760 368b4d10a6ae844cecdb3fe36cd3d26b 351 Hamap MF_00354 Isopentenyl-diphosphate delta-isomerase [fni]. 5 332 38.488 T 13-10-2018 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 COP00_05760 368b4d10a6ae844cecdb3fe36cd3d26b 351 PIRSF PIRSF003314 2 342 8.7E-123 T 13-10-2018 IPR011179 Isopentenyl-diphosphate delta-isomerase, FMN-dependent GO:0004452|GO:0005737|GO:0008299|GO:0010181 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922 COP00_08935 9631dc65bc9e3e01efcef1243586c18a 493 Pfam PF02610 L-arabinose isomerase 5 352 2.0E-175 T 13-10-2018 IPR003762 L-arabinose isomerase GO:0008733 KEGG: 00040+5.3.1.4 COP00_08935 9631dc65bc9e3e01efcef1243586c18a 493 ProDom PD018364 ISOMERASE L-ARABINOSE ARABINOSE METABOLISM CARBOHYDRATE CATABOLISM ARAA 10 299 3.0E-140 T 13-10-2018 IPR003762 L-arabinose isomerase GO:0008733 KEGG: 00040+5.3.1.4 COP00_08935 9631dc65bc9e3e01efcef1243586c18a 493 Hamap MF_00519 L-arabinose isomerase [araA]. 1 469 64.514 T 13-10-2018 IPR003762 L-arabinose isomerase GO:0008733 KEGG: 00040+5.3.1.4 COP00_08935 9631dc65bc9e3e01efcef1243586c18a 493 Gene3D G3DSA:3.40.50.10940 1 174 6.4E-81 T 13-10-2018 IPR038583 L-arabinose isomerase, N-terminal domain superfamily KEGG: 00040+5.3.1.4 COP00_08935 9631dc65bc9e3e01efcef1243586c18a 493 SUPERFAMILY SSF53743 3 321 1.8E-120 T 13-10-2018 IPR009015 L-fucose isomerase, N-terminal/central domain superfamily GO:0005737|GO:0005996|GO:0016861 COP00_08935 9631dc65bc9e3e01efcef1243586c18a 493 Pfam PF11762 L-arabinose isomerase C-terminal domain 355 468 1.1E-51 T 13-10-2018 IPR024664 L-arabinose isomerase, C-terminal KEGG: 00040+5.3.1.4 COP00_08935 9631dc65bc9e3e01efcef1243586c18a 493 SUPERFAMILY SSF50443 322 490 1.86E-74 T 13-10-2018 IPR004216 L-fucose/L-arabinose isomerase, C-terminal COP00_08935 9631dc65bc9e3e01efcef1243586c18a 493 PIRSF PIRSF001478 1 492 5.8E-248 T 13-10-2018 IPR003762 L-arabinose isomerase GO:0008733 KEGG: 00040+5.3.1.4 COP00_03485 f01ff5e131d6e5f8876549cd49ef1617 196 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 57 7.1E-16 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 COP00_03485 f01ff5e131d6e5f8876549cd49ef1617 196 SUPERFAMILY SSF48498 81 191 1.38E-12 T 13-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily COP00_03485 f01ff5e131d6e5f8876549cd49ef1617 196 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 3.1E-9 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 COP00_03485 f01ff5e131d6e5f8876549cd49ef1617 196 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 3.1E-9 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 COP00_03485 f01ff5e131d6e5f8876549cd49ef1617 196 Gene3D G3DSA:1.10.357.10 1 193 1.4E-74 T 13-10-2018 COP00_03485 f01ff5e131d6e5f8876549cd49ef1617 196 SUPERFAMILY SSF46689 6 71 2.51E-16 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 COP00_24390 f36342b69e3dc1c8fe21532e91f6ca6f 193 SUPERFAMILY SSF51283 4 176 3.71E-40 T 13-10-2018 IPR036157 dUTPase-like superfamily COP00_24390 f36342b69e3dc1c8fe21532e91f6ca6f 193 Pfam PF00692 dUTPase 12 94 4.2E-15 T 13-10-2018 IPR029054 dUTPase-like COP00_24390 f36342b69e3dc1c8fe21532e91f6ca6f 193 Pfam PF00692 dUTPase 134 175 8.6E-6 T 13-10-2018 IPR029054 dUTPase-like COP00_24390 f36342b69e3dc1c8fe21532e91f6ca6f 193 Gene3D G3DSA:2.70.40.10 1 176 1.5E-55 T 13-10-2018 IPR036157 dUTPase-like superfamily COP00_02980 845ee4cc1e07da6b9ba97dfc2000f0bf 134 Pfam PF07972 NrdI Flavodoxin like 3 113 2.8E-32 T 13-10-2018 IPR004465 Ribonucleotide reductase Class Ib, NrdI COP00_02980 845ee4cc1e07da6b9ba97dfc2000f0bf 134 SUPERFAMILY SSF52218 1 115 1.06E-19 T 13-10-2018 IPR029039 Flavoprotein-like superfamily COP00_02980 845ee4cc1e07da6b9ba97dfc2000f0bf 134 PIRSF PIRSF005087 1 128 9.0E-39 T 13-10-2018 IPR004465 Ribonucleotide reductase Class Ib, NrdI COP00_02980 845ee4cc1e07da6b9ba97dfc2000f0bf 134 Hamap MF_00128 Protein NrdI [nrdI]. 1 123 25.389 T 13-10-2018 IPR020852 Ribonucleotide reductase, class Ib, NrdI, bacterial COP00_02980 845ee4cc1e07da6b9ba97dfc2000f0bf 134 Gene3D G3DSA:3.40.50.360 1 131 9.9E-39 T 13-10-2018 IPR029039 Flavoprotein-like superfamily COP00_02980 845ee4cc1e07da6b9ba97dfc2000f0bf 134 TIGRFAM TIGR00333 nrdI: nrdI protein 3 123 9.3E-41 T 13-10-2018 IPR004465 Ribonucleotide reductase Class Ib, NrdI COP00_02045 c3e75d0b9dffdbc73e4a87e053906b06 422 Gene3D G3DSA:3.10.350.10 5 49 3.5E-12 T 13-10-2018 IPR036779 LysM domain superfamily COP00_02045 c3e75d0b9dffdbc73e4a87e053906b06 422 SMART SM00636 103 405 2.6E-29 T 13-10-2018 IPR011583 Chitinase II GO:0008061 COP00_02045 c3e75d0b9dffdbc73e4a87e053906b06 422 Gene3D G3DSA:3.10.350.10 51 96 1.0E-12 T 13-10-2018 IPR036779 LysM domain superfamily COP00_02045 c3e75d0b9dffdbc73e4a87e053906b06 422 Pfam PF01476 LysM domain 53 96 4.3E-6 T 13-10-2018 IPR018392 LysM domain COP00_02045 c3e75d0b9dffdbc73e4a87e053906b06 422 Pfam PF01476 LysM domain 7 49 9.1E-11 T 13-10-2018 IPR018392 LysM domain COP00_02045 c3e75d0b9dffdbc73e4a87e053906b06 422 SUPERFAMILY SSF54106 5 49 1.26E-9 T 13-10-2018 COP00_02045 c3e75d0b9dffdbc73e4a87e053906b06 422 Gene3D G3DSA:3.20.20.80 133 402 7.9E-103 T 13-10-2018 COP00_02045 c3e75d0b9dffdbc73e4a87e053906b06 422 Gene3D G3DSA:3.10.50.10 320 376 7.9E-103 T 13-10-2018 IPR029070 Chitinase insertion domain superfamily COP00_02045 c3e75d0b9dffdbc73e4a87e053906b06 422 Pfam PF00704 Glycosyl hydrolases family 18 177 402 4.0E-29 T 13-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 COP00_02045 c3e75d0b9dffdbc73e4a87e053906b06 422 SUPERFAMILY SSF51445 113 418 5.48E-49 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily COP00_02045 c3e75d0b9dffdbc73e4a87e053906b06 422 SUPERFAMILY SSF54106 51 96 3.14E-7 T 13-10-2018 COP00_02045 c3e75d0b9dffdbc73e4a87e053906b06 422 SMART SM00257 52 96 1.0E-9 T 13-10-2018 IPR018392 LysM domain COP00_02045 c3e75d0b9dffdbc73e4a87e053906b06 422 SMART SM00257 6 49 8.9E-12 T 13-10-2018 IPR018392 LysM domain COP00_16100 d6632866449ff71071612a92b97b0844 198 Gene3D G3DSA:1.10.8.420 1 53 3.3E-20 T 13-10-2018 COP00_16100 d6632866449ff71071612a92b97b0844 198 Gene3D G3DSA:3.40.1360.10 77 198 5.3E-50 T 13-10-2018 COP00_16100 d6632866449ff71071612a92b97b0844 198 ProSitePatterns PS01300 RecR protein signature. 57 78 - T 13-10-2018 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 COP00_16100 d6632866449ff71071612a92b97b0844 198 Pfam PF02132 RecR protein 40 78 1.3E-17 T 13-10-2018 IPR023628 Recombination protein RecR, C4-type zinc finger COP00_16100 d6632866449ff71071612a92b97b0844 198 SUPERFAMILY SSF111304 1 198 1.44E-79 T 13-10-2018 IPR023627 Recombination protein RecR COP00_16100 d6632866449ff71071612a92b97b0844 198 Hamap MF_00017 Recombination protein RecR [recR]. 1 198 112.498 T 13-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 COP00_16100 d6632866449ff71071612a92b97b0844 198 SMART SM00493 80 165 9.8E-20 T 13-10-2018 IPR006171 TOPRIM domain COP00_16100 d6632866449ff71071612a92b97b0844 198 TIGRFAM TIGR00615 recR: recombination protein RecR 1 196 8.0E-92 T 13-10-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 COP00_16100 d6632866449ff71071612a92b97b0844 198 Pfam PF13662 Toprim domain 80 171 4.7E-26 T 13-10-2018 IPR006171 TOPRIM domain COP00_19850 653320d97d2baa6fe343db0cfde01144 548 Pfam PF04740 LXG domain of WXG superfamily 2 202 4.8E-70 T 13-10-2018 IPR006829 LXG domain COP00_19850 653320d97d2baa6fe343db0cfde01144 548 Pfam PF14449 Pre-toxin TG 356 413 9.0E-14 T 13-10-2018 IPR027797 Pre-toxin TG domain COP00_19850 653320d97d2baa6fe343db0cfde01144 548 Pfam PF15542 Bacterial toxin 50 450 542 1.2E-29 T 13-10-2018 IPR029100 Bacterial toxin 50 COP00_15215 1dbd408805242254f08bae28b6cfbfb2 576 Pfam PF10096 Uncharacterized protein conserved in bacteria (DUF2334) 216 481 8.3E-64 T 13-10-2018 IPR018763 Protein of unknown function DUF2334 COP00_15215 1dbd408805242254f08bae28b6cfbfb2 576 SUPERFAMILY SSF88713 237 408 6.67E-5 T 13-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 COP00_20200 5f7fa13b3a15dd308f6c2f8690ddc059 238 ProSitePatterns PS01058 SAICAR synthetase signature 2. 175 183 - T 13-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 COP00_20200 5f7fa13b3a15dd308f6c2f8690ddc059 238 Gene3D G3DSA:3.30.470.20 87 223 7.8E-98 T 13-10-2018 COP00_20200 5f7fa13b3a15dd308f6c2f8690ddc059 238 Gene3D G3DSA:3.30.200.20 9 234 7.8E-98 T 13-10-2018 COP00_20200 5f7fa13b3a15dd308f6c2f8690ddc059 238 Pfam PF01259 SAICAR synthetase 9 233 2.5E-67 T 13-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 COP00_20200 5f7fa13b3a15dd308f6c2f8690ddc059 238 SUPERFAMILY SSF56104 3 237 6.87E-83 T 13-10-2018 COP00_20200 5f7fa13b3a15dd308f6c2f8690ddc059 238 ProSitePatterns PS01057 SAICAR synthetase signature 1. 88 102 - T 13-10-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 COP00_20200 5f7fa13b3a15dd308f6c2f8690ddc059 238 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 3 236 1.0E-82 T 13-10-2018 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234 COP00_20200 5f7fa13b3a15dd308f6c2f8690ddc059 238 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 6 237 33.528 T 13-10-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 COP00_11770 4894746b944f85081dc1110f8daca260 269 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 8 230 4.2E-23 T 13-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 COP00_11770 4894746b944f85081dc1110f8daca260 269 SUPERFAMILY SSF53335 1 261 6.28E-48 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase COP00_11770 4894746b944f85081dc1110f8daca260 269 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 175 187 1.4E-8 T 13-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 COP00_11770 4894746b944f85081dc1110f8daca260 269 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 49 62 1.4E-8 T 13-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 COP00_11770 4894746b944f85081dc1110f8daca260 269 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 8 24 1.4E-8 T 13-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 COP00_11770 4894746b944f85081dc1110f8daca260 269 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 29 43 1.4E-8 T 13-10-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 COP00_11770 4894746b944f85081dc1110f8daca260 269 Gene3D G3DSA:1.10.1020.10 56 155 1.2E-40 T 13-10-2018 IPR023095 Adenine-specific methyltransferase, domain 2 GO:0009007 COP00_11770 4894746b944f85081dc1110f8daca260 269 PIRSF PIRSF000398 1 264 5.0E-43 T 13-10-2018 IPR012263 Adenine modification methylase, M.EcoRV-type GO:0009007|GO:0032775 COP00_11770 4894746b944f85081dc1110f8daca260 269 Gene3D G3DSA:3.40.50.150 6 228 1.2E-40 T 13-10-2018 COP00_01915 91a08cb6e0ddd88371b601b99409cc4e 160 Pfam PF04073 Aminoacyl-tRNA editing domain 39 150 1.6E-23 T 13-10-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 COP00_01915 91a08cb6e0ddd88371b601b99409cc4e 160 PIRSF PIRSF006181 3 160 7.5E-62 T 13-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC COP00_01915 91a08cb6e0ddd88371b601b99409cc4e 160 TIGRFAM TIGR00011 YbaK_EbsC: Cys-tRNA(Pro) deacylase 8 159 1.2E-57 T 13-10-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC COP00_01915 91a08cb6e0ddd88371b601b99409cc4e 160 SUPERFAMILY SSF55826 8 159 3.92E-38 T 13-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 COP00_01915 91a08cb6e0ddd88371b601b99409cc4e 160 Gene3D G3DSA:3.90.960.10 1 160 8.4E-52 T 13-10-2018 IPR036754 YbaK/aminoacyl-tRNA synthetase-associated domain superfamily GO:0002161 KEGG: 00970+6.1.1.15 COP00_20480 a6f0fc9c9ef569e418d17e2f366c6625 302 Gene3D G3DSA:3.40.190.290 92 296 4.8E-32 T 13-10-2018 COP00_20480 a6f0fc9c9ef569e418d17e2f366c6625 302 SUPERFAMILY SSF46785 1 89 3.92E-18 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_20480 a6f0fc9c9ef569e418d17e2f366c6625 302 Pfam PF03466 LysR substrate binding domain 90 291 2.0E-29 T 13-10-2018 IPR005119 LysR, substrate-binding COP00_20480 a6f0fc9c9ef569e418d17e2f366c6625 302 SUPERFAMILY SSF53850 90 293 1.33E-23 T 13-10-2018 COP00_20480 a6f0fc9c9ef569e418d17e2f366c6625 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 64 6.3E-17 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 COP00_20480 a6f0fc9c9ef569e418d17e2f366c6625 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.7E-7 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 COP00_20480 a6f0fc9c9ef569e418d17e2f366c6625 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.7E-7 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 COP00_20480 a6f0fc9c9ef569e418d17e2f366c6625 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.7E-7 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 COP00_20480 a6f0fc9c9ef569e418d17e2f366c6625 302 Gene3D G3DSA:1.10.10.10 1 91 6.7E-23 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_03145 ffc7e44b9b055be7941aa851f26378d2 133 Pfam PF01381 Helix-turn-helix 13 67 6.8E-14 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 COP00_03145 ffc7e44b9b055be7941aa851f26378d2 133 Gene3D G3DSA:1.10.260.40 9 118 2.7E-20 T 13-10-2018 COP00_03145 ffc7e44b9b055be7941aa851f26378d2 133 SMART SM00530 12 67 2.6E-13 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 COP00_03145 ffc7e44b9b055be7941aa851f26378d2 133 SUPERFAMILY SSF47413 7 75 4.83E-17 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 COP00_08105 7cd1ad2b32cc07c56b9103f35de22d62 220 Gene3D G3DSA:3.40.50.150 2 219 2.9E-57 T 13-10-2018 COP00_08105 7cd1ad2b32cc07c56b9103f35de22d62 220 Pfam PF01596 O-methyltransferase 46 215 7.0E-29 T 13-10-2018 IPR002935 O-methyltransferase, family 3 GO:0008171 COP00_08105 7cd1ad2b32cc07c56b9103f35de22d62 220 SUPERFAMILY SSF53335 9 215 5.94E-38 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase COP00_04580 1b5e6dd90b85d9b1ec7c17fa682b8058 178 Gene3D G3DSA:3.40.630.30 3 173 8.4E-50 T 13-10-2018 COP00_04580 1b5e6dd90b85d9b1ec7c17fa682b8058 178 SUPERFAMILY SSF55729 1 173 3.17E-52 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase COP00_04580 1b5e6dd90b85d9b1ec7c17fa682b8058 178 Pfam PF13302 Acetyltransferase (GNAT) domain 9 149 8.9E-31 T 13-10-2018 IPR000182 GNAT domain COP00_16020 9ae1f50aea7b17ed17d3e79678840889 425 Gene3D G3DSA:3.30.930.10 106 425 5.9E-130 T 13-10-2018 COP00_16020 9ae1f50aea7b17ed17d3e79678840889 425 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 220 400 1.6E-38 T 13-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 COP00_16020 9ae1f50aea7b17ed17d3e79678840889 425 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 417 8.2E-188 T 13-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 COP00_16020 9ae1f50aea7b17ed17d3e79678840889 425 PIRSF PIRSF001529 1 425 1.2E-193 T 13-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 COP00_16020 9ae1f50aea7b17ed17d3e79678840889 425 SUPERFAMILY SSF55681 117 422 1.83E-106 T 13-10-2018 COP00_16020 9ae1f50aea7b17ed17d3e79678840889 425 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 422 44.184 T 13-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 COP00_16020 9ae1f50aea7b17ed17d3e79678840889 425 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 108 2.2E-33 T 13-10-2018 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: R-HSA-2408557|Reactome: R-HSA-379716 COP00_16020 9ae1f50aea7b17ed17d3e79678840889 425 Gene3D G3DSA:1.10.287.40 1 105 2.6E-27 T 13-10-2018 COP00_16020 9ae1f50aea7b17ed17d3e79678840889 425 PRINTS PR00981 Seryl-tRNA synthetase signature 276 289 1.2E-32 T 13-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 COP00_16020 9ae1f50aea7b17ed17d3e79678840889 425 PRINTS PR00981 Seryl-tRNA synthetase signature 333 349 1.2E-32 T 13-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 COP00_16020 9ae1f50aea7b17ed17d3e79678840889 425 PRINTS PR00981 Seryl-tRNA synthetase signature 316 329 1.2E-32 T 13-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 COP00_16020 9ae1f50aea7b17ed17d3e79678840889 425 PRINTS PR00981 Seryl-tRNA synthetase signature 264 276 1.2E-32 T 13-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 COP00_16020 9ae1f50aea7b17ed17d3e79678840889 425 PRINTS PR00981 Seryl-tRNA synthetase signature 351 367 1.2E-32 T 13-10-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 COP00_16020 9ae1f50aea7b17ed17d3e79678840889 425 SUPERFAMILY SSF46589 1 113 2.35E-32 T 13-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 COP00_13710 0217370c8f4fb912db53baa28bd50be2 334 Pfam PF01032 FecCD transport family 18 327 2.5E-85 T 13-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 COP00_13710 0217370c8f4fb912db53baa28bd50be2 334 Gene3D G3DSA:1.10.3470.10 3 332 3.0E-87 T 13-10-2018 IPR037294 ABC transporter, BtuC-like COP00_13710 0217370c8f4fb912db53baa28bd50be2 334 SUPERFAMILY SSF81345 4 327 4.84E-77 T 13-10-2018 IPR037294 ABC transporter, BtuC-like COP00_22210 55d70f9dd2e9e6f1d83ae6b9e3d17e46 354 Gene3D G3DSA:3.20.20.210 1 353 4.4E-149 T 13-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 COP00_22210 55d70f9dd2e9e6f1d83ae6b9e3d17e46 354 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 9 345 46.961 T 13-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 COP00_22210 55d70f9dd2e9e6f1d83ae6b9e3d17e46 354 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 25 34 - T 13-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 COP00_22210 55d70f9dd2e9e6f1d83ae6b9e3d17e46 354 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 12 343 4.3E-127 T 13-10-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 COP00_22210 55d70f9dd2e9e6f1d83ae6b9e3d17e46 354 SUPERFAMILY SSF51726 8 346 4.19E-104 T 13-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 COP00_22210 55d70f9dd2e9e6f1d83ae6b9e3d17e46 354 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 143 159 - T 13-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 COP00_22210 55d70f9dd2e9e6f1d83ae6b9e3d17e46 354 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 9 344 2.3E-122 T 13-10-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 COP00_22540 19d0db69d91fc0447efa3278d98d6881 351 Hamap MF_01820 Small ribosomal subunit biogenesis GTPase RsgA [rsgA]. 24 324 32.159 T 13-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 COP00_22540 19d0db69d91fc0447efa3278d98d6881 351 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 66 317 1.9E-48 T 13-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 COP00_22540 19d0db69d91fc0447efa3278d98d6881 351 SUPERFAMILY SSF50249 25 89 4.11E-6 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold COP00_22540 19d0db69d91fc0447efa3278d98d6881 351 SUPERFAMILY SSF52540 104 323 5.55E-49 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_22540 19d0db69d91fc0447efa3278d98d6881 351 Gene3D G3DSA:1.10.40.50 262 334 1.0E-21 T 13-10-2018 COP00_22540 19d0db69d91fc0447efa3278d98d6881 351 Gene3D G3DSA:3.40.50.300 91 260 2.1E-44 T 13-10-2018 COP00_22540 19d0db69d91fc0447efa3278d98d6881 351 Pfam PF03193 RsgA GTPase 87 261 6.5E-47 T 13-10-2018 IPR010914 RsgA GTPase domain GO:0003924|GO:0005525 COP00_24285 efa4afd043f1ae4acd3c5c86b7e1e8e5 326 Gene3D G3DSA:3.40.1360.10 198 316 4.3E-13 T 13-10-2018 COP00_24285 efa4afd043f1ae4acd3c5c86b7e1e8e5 326 SUPERFAMILY SSF56731 132 318 1.18E-11 T 13-10-2018 COP00_24285 efa4afd043f1ae4acd3c5c86b7e1e8e5 326 Pfam PF13155 Toprim-like 216 300 1.7E-8 T 13-10-2018 COP00_00170 a7c5a2e98e7498af9d5c70c67a589d37 635 SUPERFAMILY SSF81653 134 231 1.01E-26 T 13-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 COP00_00170 a7c5a2e98e7498af9d5c70c67a589d37 635 Gene3D G3DSA:3.40.50.1000 313 581 3.9E-86 T 13-10-2018 IPR023214 HAD superfamily COP00_00170 a7c5a2e98e7498af9d5c70c67a589d37 635 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 477 487 2.7E-30 T 13-10-2018 COP00_00170 a7c5a2e98e7498af9d5c70c67a589d37 635 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 332 346 2.7E-30 T 13-10-2018 COP00_00170 a7c5a2e98e7498af9d5c70c67a589d37 635 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 455 466 2.7E-30 T 13-10-2018 COP00_00170 a7c5a2e98e7498af9d5c70c67a589d37 635 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 553 565 2.7E-30 T 13-10-2018 COP00_00170 a7c5a2e98e7498af9d5c70c67a589d37 635 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 530 549 2.7E-30 T 13-10-2018 COP00_00170 a7c5a2e98e7498af9d5c70c67a589d37 635 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 181 195 2.7E-30 T 13-10-2018 COP00_00170 a7c5a2e98e7498af9d5c70c67a589d37 635 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 104 606 1.1E-82 T 13-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 COP00_00170 a7c5a2e98e7498af9d5c70c67a589d37 635 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 81 418 1.5E-95 T 13-10-2018 COP00_00170 a7c5a2e98e7498af9d5c70c67a589d37 635 Pfam PF00702 haloacid dehalogenase-like hydrolase 329 544 1.8E-40 T 13-10-2018 COP00_00170 a7c5a2e98e7498af9d5c70c67a589d37 635 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 81 632 5.9E-184 T 13-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 COP00_00170 a7c5a2e98e7498af9d5c70c67a589d37 635 Pfam PF00122 E1-E2 ATPase 131 310 1.2E-49 T 13-10-2018 COP00_00170 a7c5a2e98e7498af9d5c70c67a589d37 635 Gene3D G3DSA:2.70.150.20 125 236 1.7E-37 T 13-10-2018 COP00_00170 a7c5a2e98e7498af9d5c70c67a589d37 635 SUPERFAMILY SSF81665 82 607 8.37E-14 T 13-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 COP00_00170 a7c5a2e98e7498af9d5c70c67a589d37 635 ProSitePatterns PS01229 Hypothetical cof family signature 2. 530 552 - T 13-10-2018 COP00_00170 a7c5a2e98e7498af9d5c70c67a589d37 635 PRINTS PR00941 Cadmium-transporting ATPase signature 197 213 3.2E-10 T 13-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 COP00_00170 a7c5a2e98e7498af9d5c70c67a589d37 635 PRINTS PR00941 Cadmium-transporting ATPase signature 44 61 3.2E-10 T 13-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 COP00_00170 a7c5a2e98e7498af9d5c70c67a589d37 635 PRINTS PR00941 Cadmium-transporting ATPase signature 61 73 3.2E-10 T 13-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 COP00_00170 a7c5a2e98e7498af9d5c70c67a589d37 635 PRINTS PR00941 Cadmium-transporting ATPase signature 116 136 3.2E-10 T 13-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 COP00_00170 a7c5a2e98e7498af9d5c70c67a589d37 635 PRINTS PR00941 Cadmium-transporting ATPase signature 216 230 3.2E-10 T 13-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 COP00_00170 a7c5a2e98e7498af9d5c70c67a589d37 635 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 334 340 - T 13-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 COP00_00170 a7c5a2e98e7498af9d5c70c67a589d37 635 Gene3D G3DSA:3.40.1110.10 343 462 3.9E-86 T 13-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 COP00_00170 a7c5a2e98e7498af9d5c70c67a589d37 635 SUPERFAMILY SSF56784 330 629 4.67E-53 T 13-10-2018 IPR036412 HAD-like superfamily COP00_23520 89757032d7749d2ee63fcfc5b24e79ec 314 Gene3D G3DSA:3.10.350.10 268 314 2.2E-18 T 13-10-2018 IPR036779 LysM domain superfamily COP00_23520 89757032d7749d2ee63fcfc5b24e79ec 314 ProSitePatterns PS00953 Glycosyl hydrolases family 25 active sites signature. 7 40 - T 13-10-2018 IPR008270 Glycoside hydrolase, family 25, active site GO:0003796|GO:0009253|GO:0016998 COP00_23520 89757032d7749d2ee63fcfc5b24e79ec 314 SUPERFAMILY SSF54106 269 313 2.62E-11 T 13-10-2018 COP00_23520 89757032d7749d2ee63fcfc5b24e79ec 314 Pfam PF01476 LysM domain 218 260 1.4E-18 T 13-10-2018 IPR018392 LysM domain COP00_23520 89757032d7749d2ee63fcfc5b24e79ec 314 Pfam PF01476 LysM domain 271 313 6.0E-16 T 13-10-2018 IPR018392 LysM domain COP00_23520 89757032d7749d2ee63fcfc5b24e79ec 314 Gene3D G3DSA:3.20.20.80 1 205 8.4E-68 T 13-10-2018 COP00_23520 89757032d7749d2ee63fcfc5b24e79ec 314 SMART SM00641 3 108 3.5E-19 T 13-10-2018 IPR018077 Glycoside hydrolase, family 25 subgroup COP00_23520 89757032d7749d2ee63fcfc5b24e79ec 314 SMART SM00257 270 314 2.0E-18 T 13-10-2018 IPR018392 LysM domain COP00_23520 89757032d7749d2ee63fcfc5b24e79ec 314 SMART SM00257 217 261 5.3E-21 T 13-10-2018 IPR018392 LysM domain COP00_23520 89757032d7749d2ee63fcfc5b24e79ec 314 Pfam PF01183 Glycosyl hydrolases family 25 6 175 3.0E-48 T 13-10-2018 IPR002053 Glycoside hydrolase, family 25 GO:0003796|GO:0009253|GO:0016998 COP00_23520 89757032d7749d2ee63fcfc5b24e79ec 314 SUPERFAMILY SSF54106 215 261 9.94E-13 T 13-10-2018 COP00_23520 89757032d7749d2ee63fcfc5b24e79ec 314 SUPERFAMILY SSF51445 1 186 7.72E-56 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily COP00_23520 89757032d7749d2ee63fcfc5b24e79ec 314 Gene3D G3DSA:3.10.350.10 211 267 5.5E-22 T 13-10-2018 IPR036779 LysM domain superfamily COP00_13900 65e067a6fdc48b088567da2febfa8cf1 282 Pfam PF05116 Sucrose-6F-phosphate phosphohydrolase 21 277 1.0E-26 T 13-10-2018 IPR006380 Sucrose-phosphatase-like, N-terminal COP00_13900 65e067a6fdc48b088567da2febfa8cf1 282 Gene3D G3DSA:3.40.50.1000 155 282 9.8E-17 T 13-10-2018 IPR023214 HAD superfamily COP00_13900 65e067a6fdc48b088567da2febfa8cf1 282 SUPERFAMILY SSF56784 17 280 3.57E-30 T 13-10-2018 IPR036412 HAD-like superfamily COP00_13900 65e067a6fdc48b088567da2febfa8cf1 282 Gene3D G3DSA:3.40.50.1000 2 140 2.2E-30 T 13-10-2018 IPR023214 HAD superfamily COP00_13900 65e067a6fdc48b088567da2febfa8cf1 282 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 22 249 2.2E-21 T 13-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 COP00_15925 4e2604720f0af19c101baabc29eb8b79 119 Gene3D G3DSA:3.30.230.10 1 117 4.7E-40 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup COP00_15925 4e2604720f0af19c101baabc29eb8b79 119 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 51 65 - T 13-10-2018 IPR020539 Ribonuclease P, conserved site GO:0004526 COP00_15925 4e2604720f0af19c101baabc29eb8b79 119 Pfam PF00825 Ribonuclease P 1 107 1.2E-34 T 13-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 COP00_15925 4e2604720f0af19c101baabc29eb8b79 119 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 7 101 2.0E-44 T 13-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 COP00_15925 4e2604720f0af19c101baabc29eb8b79 119 SUPERFAMILY SSF54211 1 114 4.3E-34 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold COP00_15925 4e2604720f0af19c101baabc29eb8b79 119 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 1 111 20.502 T 13-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 COP00_15925 4e2604720f0af19c101baabc29eb8b79 119 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 1 108 1.6E-34 T 13-10-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 COP00_19330 9eabf009dfc38f21a1eaa3c6b78695d4 144 Pfam PF01047 MarR family 32 89 8.2E-16 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 COP00_19330 9eabf009dfc38f21a1eaa3c6b78695d4 144 SMART SM00347 25 125 3.9E-30 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 COP00_19330 9eabf009dfc38f21a1eaa3c6b78695d4 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 85 101 5.9E-16 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 COP00_19330 9eabf009dfc38f21a1eaa3c6b78695d4 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 115 135 5.9E-16 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 COP00_19330 9eabf009dfc38f21a1eaa3c6b78695d4 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 49 65 5.9E-16 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 COP00_19330 9eabf009dfc38f21a1eaa3c6b78695d4 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 66 81 5.9E-16 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 COP00_19330 9eabf009dfc38f21a1eaa3c6b78695d4 144 Gene3D G3DSA:1.10.10.10 6 143 9.4E-34 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_19330 9eabf009dfc38f21a1eaa3c6b78695d4 144 SUPERFAMILY SSF46785 26 140 5.73E-30 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_00455 cf81bddfd7ca6ed90050dabc3a81f623 303 PIRSF PIRSF000535 1 303 6.8E-102 T 13-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 COP00_00455 cf81bddfd7ca6ed90050dabc3a81f623 303 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 2 301 2.7E-109 T 13-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 COP00_00455 cf81bddfd7ca6ed90050dabc3a81f623 303 TIGRFAM TIGR03828 pfkB: 1-phosphofructokinase 2 301 1.1E-108 T 13-10-2018 IPR022463 Fructose 1-phosphate kinase GO:0008662 KEGG: 00051+2.7.1.56 COP00_00455 cf81bddfd7ca6ed90050dabc3a81f623 303 Gene3D G3DSA:3.40.1190.20 1 303 1.4E-107 T 13-10-2018 IPR029056 Ribokinase-like COP00_00455 cf81bddfd7ca6ed90050dabc3a81f623 303 SUPERFAMILY SSF53613 1 282 2.03E-68 T 13-10-2018 IPR029056 Ribokinase-like COP00_00455 cf81bddfd7ca6ed90050dabc3a81f623 303 Pfam PF00294 pfkB family carbohydrate kinase 12 284 4.1E-57 T 13-10-2018 IPR011611 Carbohydrate kinase PfkB COP00_00455 cf81bddfd7ca6ed90050dabc3a81f623 303 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 243 256 - T 13-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 COP00_18260 6fc34355ed957be5bc6059843ca51682 373 Gene3D G3DSA:2.40.50.940 222 360 1.7E-8 T 13-10-2018 COP00_18260 6fc34355ed957be5bc6059843ca51682 373 Gene3D G3DSA:3.40.50.300 3 221 2.9E-67 T 13-10-2018 COP00_18260 6fc34355ed957be5bc6059843ca51682 373 SMART SM00382 28 211 9.3E-17 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_18260 6fc34355ed957be5bc6059843ca51682 373 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 COP00_18260 6fc34355ed957be5bc6059843ca51682 373 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 34 361 3.5E-108 T 13-10-2018 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 COP00_18260 6fc34355ed957be5bc6059843ca51682 373 Pfam PF08402 TOBE domain 288 362 3.8E-11 T 13-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 COP00_18260 6fc34355ed957be5bc6059843ca51682 373 SUPERFAMILY SSF50331 237 364 8.5E-11 T 13-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal COP00_18260 6fc34355ed957be5bc6059843ca51682 373 Gene3D G3DSA:2.40.50.140 294 356 1.7E-8 T 13-10-2018 COP00_18260 6fc34355ed957be5bc6059843ca51682 373 SUPERFAMILY SSF52540 4 241 2.54E-89 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_18260 6fc34355ed957be5bc6059843ca51682 373 Pfam PF00005 ABC transporter 19 161 5.7E-36 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 COP00_04375 192e5111d5ba1b605a6f789c7bb78024 401 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 343 352 - T 13-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 COP00_04375 192e5111d5ba1b605a6f789c7bb78024 401 Gene3D G3DSA:1.10.630.10 3 400 1.2E-129 T 13-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 COP00_04375 192e5111d5ba1b605a6f789c7bb78024 401 PRINTS PR00359 B-class P450 signature 148 163 4.1E-57 T 13-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 COP00_04375 192e5111d5ba1b605a6f789c7bb78024 401 PRINTS PR00359 B-class P450 signature 85 96 4.1E-57 T 13-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 COP00_04375 192e5111d5ba1b605a6f789c7bb78024 401 PRINTS PR00359 B-class P450 signature 194 216 4.1E-57 T 13-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 COP00_04375 192e5111d5ba1b605a6f789c7bb78024 401 PRINTS PR00359 B-class P450 signature 320 335 4.1E-57 T 13-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 COP00_04375 192e5111d5ba1b605a6f789c7bb78024 401 PRINTS PR00359 B-class P450 signature 275 286 4.1E-57 T 13-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 COP00_04375 192e5111d5ba1b605a6f789c7bb78024 401 PRINTS PR00359 B-class P450 signature 131 147 4.1E-57 T 13-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 COP00_04375 192e5111d5ba1b605a6f789c7bb78024 401 PRINTS PR00359 B-class P450 signature 292 319 4.1E-57 T 13-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 COP00_04375 192e5111d5ba1b605a6f789c7bb78024 401 PRINTS PR00359 B-class P450 signature 350 361 4.1E-57 T 13-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 COP00_04375 192e5111d5ba1b605a6f789c7bb78024 401 PRINTS PR00359 B-class P450 signature 341 350 4.1E-57 T 13-10-2018 IPR002397 Cytochrome P450, B-class GO:0005506|GO:0020037|GO:0055114 COP00_04375 192e5111d5ba1b605a6f789c7bb78024 401 Pfam PF00067 Cytochrome P450 59 394 1.8E-39 T 13-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 COP00_04375 192e5111d5ba1b605a6f789c7bb78024 401 SUPERFAMILY SSF48264 28 399 5.63E-99 T 13-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 COP00_04375 192e5111d5ba1b605a6f789c7bb78024 401 PRINTS PR00385 P450 superfamily signature 350 361 4.7E-7 T 13-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 COP00_04375 192e5111d5ba1b605a6f789c7bb78024 401 PRINTS PR00385 P450 superfamily signature 341 350 4.7E-7 T 13-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 COP00_04375 192e5111d5ba1b605a6f789c7bb78024 401 PRINTS PR00385 P450 superfamily signature 275 286 4.7E-7 T 13-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 COP00_04375 192e5111d5ba1b605a6f789c7bb78024 401 PRINTS PR00385 P450 superfamily signature 240 257 4.7E-7 T 13-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 COP00_06940 fb7566394c4f41e7fd83eebc0e90f298 266 ProSitePatterns PS01006 Formate and nitrite transporters signature 2. 162 172 - T 13-10-2018 IPR024002 Formate/nitrite transporter, conserved site COP00_06940 fb7566394c4f41e7fd83eebc0e90f298 266 ProSitePatterns PS01005 Formate and nitrite transporters signature 1. 77 86 - T 13-10-2018 IPR024002 Formate/nitrite transporter, conserved site COP00_06940 fb7566394c4f41e7fd83eebc0e90f298 266 Gene3D G3DSA:1.20.1080.10 4 263 1.8E-87 T 13-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 COP00_06940 fb7566394c4f41e7fd83eebc0e90f298 266 TIGRFAM TIGR00790 fnt: formate/nitrite transporter 21 253 1.1E-80 T 13-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 COP00_06940 fb7566394c4f41e7fd83eebc0e90f298 266 Pfam PF01226 Formate/nitrite transporter 8 249 1.9E-80 T 13-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 COP00_11415 cbef7d6308b9be58ec4230b27f8ff76c 247 Gene3D G3DSA:3.40.50.300 1 244 1.4E-64 T 13-10-2018 COP00_11415 cbef7d6308b9be58ec4230b27f8ff76c 247 SUPERFAMILY SSF52540 4 226 2.88E-56 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_11415 cbef7d6308b9be58ec4230b27f8ff76c 247 SMART SM00382 29 234 4.6E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_11415 cbef7d6308b9be58ec4230b27f8ff76c 247 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 COP00_11415 cbef7d6308b9be58ec4230b27f8ff76c 247 Pfam PF00005 ABC transporter 20 165 3.4E-31 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 COP00_19725 eaf3c66c4efb929d2978856a89d08652 132 Pfam PF04883 Bacteriophage HK97-gp10, putative tail-component 11 97 5.3E-10 T 13-10-2018 IPR010064 Bacteriophage HK97-gp10, putative tail-component COP00_19725 eaf3c66c4efb929d2978856a89d08652 132 TIGRFAM TIGR01725 phge_HK97_gp10: phage protein, HK97 gp10 family 8 130 6.0E-17 T 13-10-2018 IPR010064 Bacteriophage HK97-gp10, putative tail-component COP00_02125 7ac9fca99dc0cece3db1919b615813c0 234 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 63 79 1.5E-7 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 COP00_02125 7ac9fca99dc0cece3db1919b615813c0 234 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 49 63 1.5E-7 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 COP00_02125 7ac9fca99dc0cece3db1919b615813c0 234 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 49 60 5.9E-6 T 13-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 COP00_02125 7ac9fca99dc0cece3db1919b615813c0 234 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 60 79 5.9E-6 T 13-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 COP00_02125 7ac9fca99dc0cece3db1919b615813c0 234 Gene3D G3DSA:1.20.120.530 93 222 2.8E-21 T 13-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal COP00_02125 7ac9fca99dc0cece3db1919b615813c0 234 Pfam PF07729 FCD domain 101 218 4.2E-23 T 13-10-2018 IPR011711 GntR, C-terminal COP00_02125 7ac9fca99dc0cece3db1919b615813c0 234 Gene3D G3DSA:1.10.10.10 23 90 8.0E-27 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_02125 7ac9fca99dc0cece3db1919b615813c0 234 SMART SM00895 99 222 5.7E-14 T 13-10-2018 IPR011711 GntR, C-terminal COP00_02125 7ac9fca99dc0cece3db1919b615813c0 234 Pfam PF00392 Bacterial regulatory proteins, gntR family 28 89 1.3E-21 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 COP00_02125 7ac9fca99dc0cece3db1919b615813c0 234 SUPERFAMILY SSF48008 95 227 2.56E-19 T 13-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal COP00_02125 7ac9fca99dc0cece3db1919b615813c0 234 SMART SM00345 31 89 1.2E-21 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 COP00_02125 7ac9fca99dc0cece3db1919b615813c0 234 SUPERFAMILY SSF46785 20 93 3.61E-22 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_01650 78e9ef571c3db973472aaee33155826b 289 SUPERFAMILY SSF51569 3 287 1.15E-103 T 13-10-2018 COP00_01650 78e9ef571c3db973472aaee33155826b 289 PRINTS PR00146 Dihydrodipicolinate synthase signature 36 57 6.3E-36 T 13-10-2018 IPR002220 DapA-like GO:0016829 COP00_01650 78e9ef571c3db973472aaee33155826b 289 PRINTS PR00146 Dihydrodipicolinate synthase signature 72 90 6.3E-36 T 13-10-2018 IPR002220 DapA-like GO:0016829 COP00_01650 78e9ef571c3db973472aaee33155826b 289 PRINTS PR00146 Dihydrodipicolinate synthase signature 129 146 6.3E-36 T 13-10-2018 IPR002220 DapA-like GO:0016829 COP00_01650 78e9ef571c3db973472aaee33155826b 289 PRINTS PR00146 Dihydrodipicolinate synthase signature 104 120 6.3E-36 T 13-10-2018 IPR002220 DapA-like GO:0016829 COP00_01650 78e9ef571c3db973472aaee33155826b 289 PIRSF PIRSF001365 1 289 1.6E-97 T 13-10-2018 IPR002220 DapA-like GO:0016829 COP00_01650 78e9ef571c3db973472aaee33155826b 289 Pfam PF00701 Dihydrodipicolinate synthetase family 3 286 4.8E-118 T 13-10-2018 IPR002220 DapA-like GO:0016829 COP00_01650 78e9ef571c3db973472aaee33155826b 289 SMART SM01130 2 289 6.8E-140 T 13-10-2018 IPR002220 DapA-like GO:0016829 COP00_01650 78e9ef571c3db973472aaee33155826b 289 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 6 287 1.8E-118 T 13-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 COP00_01650 78e9ef571c3db973472aaee33155826b 289 Gene3D G3DSA:3.20.20.70 1 289 4.4E-116 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 COP00_01650 78e9ef571c3db973472aaee33155826b 289 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 134 164 - T 13-10-2018 IPR020625 Schiff base-forming aldolase, active site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 COP00_01650 78e9ef571c3db973472aaee33155826b 289 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 2 288 64.542 T 13-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 COP00_01650 78e9ef571c3db973472aaee33155826b 289 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 39 56 - T 13-10-2018 IPR020624 Schiff base-forming aldolase, conserved site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 COP00_12090 45eda0a0ffe51f3a4ea81a8284c015b8 232 Pfam PF00392 Bacterial regulatory proteins, gntR family 2 64 2.9E-20 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 COP00_12090 45eda0a0ffe51f3a4ea81a8284c015b8 232 Gene3D G3DSA:1.10.10.10 1 71 2.8E-21 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_12090 45eda0a0ffe51f3a4ea81a8284c015b8 232 SUPERFAMILY SSF48008 85 224 6.02E-30 T 13-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal COP00_12090 45eda0a0ffe51f3a4ea81a8284c015b8 232 SMART SM00345 5 64 1.9E-20 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 COP00_12090 45eda0a0ffe51f3a4ea81a8284c015b8 232 SMART SM00895 89 216 1.6E-23 T 13-10-2018 IPR011711 GntR, C-terminal COP00_12090 45eda0a0ffe51f3a4ea81a8284c015b8 232 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 38 54 2.6E-6 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 COP00_12090 45eda0a0ffe51f3a4ea81a8284c015b8 232 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 24 38 2.6E-6 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 COP00_12090 45eda0a0ffe51f3a4ea81a8284c015b8 232 Gene3D G3DSA:1.20.120.530 72 227 1.6E-30 T 13-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal COP00_12090 45eda0a0ffe51f3a4ea81a8284c015b8 232 SUPERFAMILY SSF46785 1 74 2.33E-19 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_12090 45eda0a0ffe51f3a4ea81a8284c015b8 232 Pfam PF07729 FCD domain 89 215 2.5E-24 T 13-10-2018 IPR011711 GntR, C-terminal COP00_09480 f04cbb721e3d0ca581da6a50f2d585a2 463 SUPERFAMILY SSF53187 6 462 6.29E-68 T 13-10-2018 COP00_09480 f04cbb721e3d0ca581da6a50f2d585a2 463 TIGRFAM TIGR01887 dipeptidaselike: putative dipeptidase 11 458 2.6E-171 T 13-10-2018 IPR010964 Peptidase M20A, peptidase V-related GO:0008270|GO:0016805 COP00_09480 f04cbb721e3d0ca581da6a50f2d585a2 463 Gene3D G3DSA:3.40.630.10 14 461 1.7E-170 T 13-10-2018 COP00_09480 f04cbb721e3d0ca581da6a50f2d585a2 463 Gene3D G3DSA:3.30.70.360 204 291 1.7E-170 T 13-10-2018 COP00_09480 f04cbb721e3d0ca581da6a50f2d585a2 463 Pfam PF01546 Peptidase family M20/M25/M40 84 459 1.5E-33 T 13-10-2018 IPR002933 Peptidase M20 GO:0016787 COP00_09480 f04cbb721e3d0ca581da6a50f2d585a2 463 Gene3D G3DSA:3.30.70.360 184 377 1.7E-170 T 13-10-2018 COP00_09480 f04cbb721e3d0ca581da6a50f2d585a2 463 SUPERFAMILY SSF55031 184 369 4.04E-48 T 13-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain COP00_16275 4e6c9b0456df2be7c025d2fb77811117 317 Pfam PF14572 Phosphoribosyl synthetase-associated domain 208 316 3.4E-25 T 13-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 COP00_16275 4e6c9b0456df2be7c025d2fb77811117 317 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 11 317 3.1E-131 T 13-10-2018 IPR005946 Ribose-phosphate pyrophosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 COP00_16275 4e6c9b0456df2be7c025d2fb77811117 317 Gene3D G3DSA:3.40.50.2020 153 293 3.9E-128 T 13-10-2018 COP00_16275 4e6c9b0456df2be7c025d2fb77811117 317 SUPERFAMILY SSF53271 75 308 8.49E-67 T 13-10-2018 IPR029057 Phosphoribosyltransferase-like COP00_16275 4e6c9b0456df2be7c025d2fb77811117 317 Hamap MF_00583_B Putative ribose-phosphate pyrophosphokinase [prs]. 10 317 51.463 T 13-10-2018 IPR037515 Ribose-phosphate pyrophosphokinase, bacterial-type GO:0004749 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 COP00_16275 4e6c9b0456df2be7c025d2fb77811117 317 SMART SM01400 10 126 6.8E-83 T 13-10-2018 COP00_16275 4e6c9b0456df2be7c025d2fb77811117 317 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 10 126 7.6E-52 T 13-10-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 COP00_16275 4e6c9b0456df2be7c025d2fb77811117 317 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 134 149 - T 13-10-2018 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 COP00_16275 4e6c9b0456df2be7c025d2fb77811117 317 Gene3D G3DSA:3.40.50.2020 13 305 3.9E-128 T 13-10-2018 COP00_01410 55ae5743671541dc51c04eaee3d467a8 332 Gene3D G3DSA:2.30.330.10 242 326 4.4E-10 T 13-10-2018 IPR036429 SpoA-like superfamily COP00_01410 55ae5743671541dc51c04eaee3d467a8 332 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 254 322 6.5E-21 T 13-10-2018 IPR001543 Surface presentation of antigen (SpoA) COP00_01410 55ae5743671541dc51c04eaee3d467a8 332 PRINTS PR00955 Flagellar motor switch protein FliM signature 3 16 2.0E-29 T 13-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 COP00_01410 55ae5743671541dc51c04eaee3d467a8 332 PRINTS PR00955 Flagellar motor switch protein FliM signature 212 230 2.0E-29 T 13-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 COP00_01410 55ae5743671541dc51c04eaee3d467a8 332 PRINTS PR00955 Flagellar motor switch protein FliM signature 116 135 2.0E-29 T 13-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 COP00_01410 55ae5743671541dc51c04eaee3d467a8 332 PRINTS PR00955 Flagellar motor switch protein FliM signature 91 107 2.0E-29 T 13-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 COP00_01410 55ae5743671541dc51c04eaee3d467a8 332 TIGRFAM TIGR01397 fliM_switch: flagellar motor switch protein FliM 4 322 3.1E-113 T 13-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 COP00_01410 55ae5743671541dc51c04eaee3d467a8 332 Pfam PF02154 Flagellar motor switch protein FliM 40 230 1.4E-79 T 13-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 COP00_01410 55ae5743671541dc51c04eaee3d467a8 332 SUPERFAMILY SSF103039 47 232 1.05E-33 T 13-10-2018 IPR028976 CheC-like superfamily COP00_01410 55ae5743671541dc51c04eaee3d467a8 332 PIRSF PIRSF002888 2 331 1.1E-120 T 13-10-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 COP00_01410 55ae5743671541dc51c04eaee3d467a8 332 SUPERFAMILY SSF101801 251 323 3.27E-17 T 13-10-2018 IPR036429 SpoA-like superfamily COP00_01410 55ae5743671541dc51c04eaee3d467a8 332 Gene3D G3DSA:3.40.1550.10 46 231 1.2E-60 T 13-10-2018 IPR028976 CheC-like superfamily COP00_17935 6783c57b93e57b0b74d17dba3f88885c 280 SUPERFAMILY SSF52821 154 278 3.67E-34 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily COP00_17935 6783c57b93e57b0b74d17dba3f88885c 280 ProSitePatterns PS00380 Rhodanese signature 1. 40 51 - T 13-10-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350|MetaCyc: PWY-7927|Reactome: R-HSA-1614558 COP00_17935 6783c57b93e57b0b74d17dba3f88885c 280 SUPERFAMILY SSF52821 4 153 1.01E-43 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily COP00_17935 6783c57b93e57b0b74d17dba3f88885c 280 Gene3D G3DSA:3.40.250.10 1 149 1.5E-50 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily COP00_17935 6783c57b93e57b0b74d17dba3f88885c 280 SMART SM00450 7 133 1.1E-21 T 13-10-2018 IPR001763 Rhodanese-like domain COP00_17935 6783c57b93e57b0b74d17dba3f88885c 280 SMART SM00450 156 273 2.1E-20 T 13-10-2018 IPR001763 Rhodanese-like domain COP00_17935 6783c57b93e57b0b74d17dba3f88885c 280 Pfam PF00581 Rhodanese-like domain 6 129 4.3E-21 T 13-10-2018 IPR001763 Rhodanese-like domain COP00_17935 6783c57b93e57b0b74d17dba3f88885c 280 Pfam PF00581 Rhodanese-like domain 158 268 1.1E-16 T 13-10-2018 IPR001763 Rhodanese-like domain COP00_17935 6783c57b93e57b0b74d17dba3f88885c 280 Gene3D G3DSA:3.40.250.10 150 280 3.6E-36 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily COP00_08785 9ccab1f098f4885ceaceac67ced0940d 197 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 56 3.4E-17 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 COP00_08785 9ccab1f098f4885ceaceac67ced0940d 197 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 2.0E-11 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 COP00_08785 9ccab1f098f4885ceaceac67ced0940d 197 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 2.0E-11 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 COP00_08785 9ccab1f098f4885ceaceac67ced0940d 197 SUPERFAMILY SSF46689 6 82 8.25E-17 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 COP00_08785 9ccab1f098f4885ceaceac67ced0940d 197 Gene3D G3DSA:1.10.10.60 1 49 1.3E-23 T 13-10-2018 COP00_08785 9ccab1f098f4885ceaceac67ced0940d 197 Gene3D G3DSA:1.10.357.10 50 197 2.0E-39 T 13-10-2018 COP00_08785 9ccab1f098f4885ceaceac67ced0940d 197 SUPERFAMILY SSF48498 78 193 1.31E-29 T 13-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily COP00_08785 9ccab1f098f4885ceaceac67ced0940d 197 Pfam PF08359 YsiA-like protein, C-terminal region 58 190 5.5E-63 T 13-10-2018 IPR013570 Transcription regulator YsiA, C-terminal COP00_02050 146b9288cbc79e780a07952e95fbfc15 194 Gene3D G3DSA:1.10.357.10 66 194 5.9E-20 T 13-10-2018 COP00_02050 146b9288cbc79e780a07952e95fbfc15 194 SUPERFAMILY SSF48498 79 193 2.97E-16 T 13-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily COP00_02050 146b9288cbc79e780a07952e95fbfc15 194 SUPERFAMILY SSF46689 3 74 2.1E-13 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 COP00_02050 146b9288cbc79e780a07952e95fbfc15 194 Gene3D G3DSA:1.10.10.60 1 65 5.7E-20 T 13-10-2018 COP00_02050 146b9288cbc79e780a07952e95fbfc15 194 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 58 4.1E-10 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 COP00_07705 577cf1ef07f4f64bb76d6429aff2d7a3 442 SUPERFAMILY SSF56327 173 440 3.95E-93 T 13-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 COP00_07705 577cf1ef07f4f64bb76d6429aff2d7a3 442 SUPERFAMILY SSF51735 4 168 3.28E-56 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily COP00_07705 577cf1ef07f4f64bb76d6429aff2d7a3 442 ProSitePatterns PS01324 Glycosyl hydrolases family 4 signature. 141 172 - T 13-10-2018 IPR019802 Glycoside hydrolase, family 4, conserved site GO:0004553|GO:0005975 COP00_07705 577cf1ef07f4f64bb76d6429aff2d7a3 442 Pfam PF02056 Family 4 glycosyl hydrolase 6 187 5.0E-75 T 13-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 COP00_07705 577cf1ef07f4f64bb76d6429aff2d7a3 442 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 197 412 5.6E-47 T 13-10-2018 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 COP00_07705 577cf1ef07f4f64bb76d6429aff2d7a3 442 PRINTS PR00732 Glycosyl hydrolase family 4 signature 98 111 4.1E-53 T 13-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 COP00_07705 577cf1ef07f4f64bb76d6429aff2d7a3 442 PRINTS PR00732 Glycosyl hydrolase family 4 signature 6 21 4.1E-53 T 13-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 COP00_07705 577cf1ef07f4f64bb76d6429aff2d7a3 442 PRINTS PR00732 Glycosyl hydrolase family 4 signature 193 205 4.1E-53 T 13-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 COP00_07705 577cf1ef07f4f64bb76d6429aff2d7a3 442 PRINTS PR00732 Glycosyl hydrolase family 4 signature 141 158 4.1E-53 T 13-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 COP00_07705 577cf1ef07f4f64bb76d6429aff2d7a3 442 PRINTS PR00732 Glycosyl hydrolase family 4 signature 77 93 4.1E-53 T 13-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 COP00_07705 577cf1ef07f4f64bb76d6429aff2d7a3 442 PRINTS PR00732 Glycosyl hydrolase family 4 signature 167 178 4.1E-53 T 13-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 COP00_07705 577cf1ef07f4f64bb76d6429aff2d7a3 442 PRINTS PR00732 Glycosyl hydrolase family 4 signature 112 132 4.1E-53 T 13-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 COP00_07705 577cf1ef07f4f64bb76d6429aff2d7a3 442 Gene3D G3DSA:3.90.110.10 171 442 2.3E-99 T 13-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 COP00_07705 577cf1ef07f4f64bb76d6429aff2d7a3 442 Gene3D G3DSA:3.40.50.720 1 170 1.4E-72 T 13-10-2018 COP00_01300 2b2d68f84136f0f7282b81da3c4a82d5 300 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 152 181 - T 13-10-2018 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site COP00_01300 2b2d68f84136f0f7282b81da3c4a82d5 300 Hamap MF_01988 Succinate--CoA ligase [ADP-forming] subunit alpha [sucD]. 1 288 43.831 T 13-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 COP00_01300 2b2d68f84136f0f7282b81da3c4a82d5 300 Gene3D G3DSA:3.40.50.720 1 123 2.6E-52 T 13-10-2018 COP00_01300 2b2d68f84136f0f7282b81da3c4a82d5 300 PIRSF PIRSF001553 1 291 3.6E-134 T 13-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 COP00_01300 2b2d68f84136f0f7282b81da3c4a82d5 300 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 4 288 3.3E-149 T 13-10-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 COP00_01300 2b2d68f84136f0f7282b81da3c4a82d5 300 SUPERFAMILY SSF51735 1 122 2.31E-43 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily COP00_01300 2b2d68f84136f0f7282b81da3c4a82d5 300 SMART SM00881 4 100 1.6E-35 T 13-10-2018 IPR003781 CoA-binding GO:0048037 COP00_01300 2b2d68f84136f0f7282b81da3c4a82d5 300 Gene3D G3DSA:3.40.50.261 124 289 9.1E-72 T 13-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 COP00_01300 2b2d68f84136f0f7282b81da3c4a82d5 300 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 7.5E-40 T 13-10-2018 COP00_01300 2b2d68f84136f0f7282b81da3c4a82d5 300 PRINTS PR01798 Succinyl-CoA synthase signature 177 195 7.5E-40 T 13-10-2018 COP00_01300 2b2d68f84136f0f7282b81da3c4a82d5 300 PRINTS PR01798 Succinyl-CoA synthase signature 208 221 7.5E-40 T 13-10-2018 COP00_01300 2b2d68f84136f0f7282b81da3c4a82d5 300 PRINTS PR01798 Succinyl-CoA synthase signature 240 257 7.5E-40 T 13-10-2018 COP00_01300 2b2d68f84136f0f7282b81da3c4a82d5 300 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 236 249 - T 13-10-2018 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site COP00_01300 2b2d68f84136f0f7282b81da3c4a82d5 300 Pfam PF02629 CoA binding domain 6 99 5.2E-32 T 13-10-2018 IPR003781 CoA-binding GO:0048037 COP00_01300 2b2d68f84136f0f7282b81da3c4a82d5 300 SUPERFAMILY SSF52210 123 287 1.24E-54 T 13-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 COP00_01300 2b2d68f84136f0f7282b81da3c4a82d5 300 Pfam PF00549 CoA-ligase 151 267 2.8E-18 T 13-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 COP00_02200 ef65560d0c8324d0265d1311a7c484bc 183 SMART SM00860 42 161 2.0E-8 T 13-10-2018 IPR018958 Knr4/Smi1-like domain COP00_02200 ef65560d0c8324d0265d1311a7c484bc 183 Pfam PF09346 SMI1 / KNR4 family (SUKH-1) 42 160 7.9E-10 T 13-10-2018 IPR018958 Knr4/Smi1-like domain COP00_02200 ef65560d0c8324d0265d1311a7c484bc 183 SUPERFAMILY SSF160631 38 174 6.28E-18 T 13-10-2018 COP00_02200 ef65560d0c8324d0265d1311a7c484bc 183 Gene3D G3DSA:3.40.1580.10 39 168 2.8E-14 T 13-10-2018 IPR037883 Knr4/Smi1-like domain superfamily COP00_13620 33bfaa793217f19992906065b374b090 403 ProSitePatterns PS01219 Ammonium transporters signature. 158 183 - T 13-10-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 COP00_13620 33bfaa793217f19992906065b374b090 403 Gene3D G3DSA:1.10.3430.10 1 403 2.1E-145 T 13-10-2018 IPR029020 Ammonium/urea transporter COP00_13620 33bfaa793217f19992906065b374b090 403 SUPERFAMILY SSF111352 3 381 6.93E-128 T 13-10-2018 COP00_13620 33bfaa793217f19992906065b374b090 403 TIGRFAM TIGR00836 amt: ammonium transporter 5 401 2.6E-144 T 13-10-2018 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 COP00_13620 33bfaa793217f19992906065b374b090 403 Pfam PF00909 Ammonium Transporter Family 7 401 2.1E-133 T 13-10-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 COP00_05150 82f11330aee0b1f6edc2a7a11bacdcdf 450 PIRSF PIRSF006603 1 448 9.6E-128 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 COP00_05150 82f11330aee0b1f6edc2a7a11bacdcdf 450 TIGRFAM TIGR00797 matE: MATE efflux family protein 20 410 1.0E-69 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 COP00_05150 82f11330aee0b1f6edc2a7a11bacdcdf 450 Pfam PF01554 MatE 20 181 8.8E-35 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 COP00_05150 82f11330aee0b1f6edc2a7a11bacdcdf 450 Pfam PF01554 MatE 240 401 2.1E-29 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 COP00_18510 bab071f6438e7dd760334518dc94674e 383 SUPERFAMILY SSF50956 37 380 1.7E-91 T 13-10-2018 COP00_18510 bab071f6438e7dd760334518dc94674e 383 Gene3D G3DSA:2.120.10.30 31 383 1.4E-143 T 13-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like COP00_18510 bab071f6438e7dd760334518dc94674e 383 Pfam PF02333 Phytase 7 381 2.8E-192 T 13-10-2018 IPR003431 Beta propeller phytase GO:0016158 KEGG: 00562+3.1.3.8|MetaCyc: PWY-4702 COP00_23265 e501738c960992c24e6661b52d13114f 473 SUPERFAMILY SSF103473 201 465 2.62E-30 T 13-10-2018 IPR036259 MFS transporter superfamily COP00_23265 e501738c960992c24e6661b52d13114f 473 PRINTS PR01036 Tetracycline resistance protein TetB signature 135 159 2.7E-10 T 13-10-2018 COP00_23265 e501738c960992c24e6661b52d13114f 473 PRINTS PR01036 Tetracycline resistance protein TetB signature 299 323 2.7E-10 T 13-10-2018 COP00_23265 e501738c960992c24e6661b52d13114f 473 PRINTS PR01036 Tetracycline resistance protein TetB signature 14 38 2.7E-10 T 13-10-2018 COP00_23265 e501738c960992c24e6661b52d13114f 473 PRINTS PR01036 Tetracycline resistance protein TetB signature 105 125 2.7E-10 T 13-10-2018 COP00_23265 e501738c960992c24e6661b52d13114f 473 SUPERFAMILY SSF103473 4 191 3.53E-38 T 13-10-2018 IPR036259 MFS transporter superfamily COP00_23265 e501738c960992c24e6661b52d13114f 473 Pfam PF07690 Major Facilitator Superfamily 15 407 5.4E-52 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 COP00_23265 e501738c960992c24e6661b52d13114f 473 Gene3D G3DSA:1.20.1250.20 257 472 3.6E-24 T 13-10-2018 COP00_23265 e501738c960992c24e6661b52d13114f 473 Gene3D G3DSA:1.20.1720.10 11 219 7.9E-40 T 13-10-2018 COP00_23265 e501738c960992c24e6661b52d13114f 473 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 12 427 3.1E-102 T 13-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 COP00_21530 460496a52f02ca9d4636ced5be0d1b41 307 Pfam PF00005 ABC transporter 21 161 2.2E-28 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 COP00_21530 460496a52f02ca9d4636ced5be0d1b41 307 SUPERFAMILY SSF52540 3 229 8.04E-61 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_21530 460496a52f02ca9d4636ced5be0d1b41 307 Gene3D G3DSA:3.40.50.300 1 235 5.8E-61 T 13-10-2018 COP00_21530 460496a52f02ca9d4636ced5be0d1b41 307 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 COP00_21530 460496a52f02ca9d4636ced5be0d1b41 307 SMART SM00382 29 210 7.7E-13 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_07175 69f4511935cbf427ea4ebdc874b2f6e7 373 PRINTS PR00046 Major sigma-70 factor signature 188 196 2.8E-32 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 COP00_07175 69f4511935cbf427ea4ebdc874b2f6e7 373 PRINTS PR00046 Major sigma-70 factor signature 348 359 2.8E-32 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 COP00_07175 69f4511935cbf427ea4ebdc874b2f6e7 373 PRINTS PR00046 Major sigma-70 factor signature 164 177 2.8E-32 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 COP00_07175 69f4511935cbf427ea4ebdc874b2f6e7 373 PRINTS PR00046 Major sigma-70 factor signature 333 348 2.8E-32 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 COP00_07175 69f4511935cbf427ea4ebdc874b2f6e7 373 PRINTS PR00046 Major sigma-70 factor signature 312 324 2.8E-32 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 COP00_07175 69f4511935cbf427ea4ebdc874b2f6e7 373 Pfam PF00140 Sigma-70 factor, region 1.2 102 135 2.3E-17 T 13-10-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 COP00_07175 69f4511935cbf427ea4ebdc874b2f6e7 373 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 138 361 1.0E-39 T 13-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 COP00_07175 69f4511935cbf427ea4ebdc874b2f6e7 373 Gene3D G3DSA:1.10.10.10 289 373 2.7E-36 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_07175 69f4511935cbf427ea4ebdc874b2f6e7 373 Gene3D G3DSA:1.10.601.10 100 135 7.5E-12 T 13-10-2018 COP00_07175 69f4511935cbf427ea4ebdc874b2f6e7 373 Gene3D G3DSA:1.10.601.10 136 212 3.5E-51 T 13-10-2018 COP00_07175 69f4511935cbf427ea4ebdc874b2f6e7 373 SUPERFAMILY SSF88659 270 371 5.42E-30 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like COP00_07175 69f4511935cbf427ea4ebdc874b2f6e7 373 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 9 373 34.251 T 13-10-2018 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 COP00_07175 69f4511935cbf427ea4ebdc874b2f6e7 373 SUPERFAMILY SSF88659 213 286 1.29E-23 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like COP00_07175 69f4511935cbf427ea4ebdc874b2f6e7 373 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 164 177 - T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 COP00_07175 69f4511935cbf427ea4ebdc874b2f6e7 373 Pfam PF03979 Sigma-70 factor, region 1.1 18 85 2.8E-15 T 13-10-2018 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 COP00_07175 69f4511935cbf427ea4ebdc874b2f6e7 373 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 333 359 - T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 COP00_07175 69f4511935cbf427ea4ebdc874b2f6e7 373 Pfam PF04545 Sigma-70, region 4 308 361 5.1E-20 T 13-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 COP00_07175 69f4511935cbf427ea4ebdc874b2f6e7 373 SUPERFAMILY SSF88946 101 210 9.16E-54 T 13-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 COP00_07175 69f4511935cbf427ea4ebdc874b2f6e7 373 Pfam PF04539 Sigma-70 region 3 219 295 4.1E-33 T 13-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 COP00_07175 69f4511935cbf427ea4ebdc874b2f6e7 373 Pfam PF04542 Sigma-70 region 2 140 209 3.3E-22 T 13-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 COP00_07175 69f4511935cbf427ea4ebdc874b2f6e7 373 Gene3D G3DSA:1.10.220.120 16 74 5.4E-9 T 13-10-2018 COP00_07175 69f4511935cbf427ea4ebdc874b2f6e7 373 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 137 372 1.0E-125 T 13-10-2018 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 COP00_07175 69f4511935cbf427ea4ebdc874b2f6e7 373 Gene3D G3DSA:1.10.10.10 213 288 3.9E-36 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_18365 0b2088156c709634c18466885beb6849 400 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 226 263 - T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 COP00_18365 0b2088156c709634c18466885beb6849 400 Pfam PF00202 Aminotransferase class-III 18 398 7.1E-137 T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 COP00_18365 0b2088156c709634c18466885beb6849 400 TIGRFAM TIGR01885 Orn_aminotrans: ornithine--oxo-acid transaminase 7 398 6.0E-167 T 13-10-2018 IPR010164 Ornithine aminotransferase GO:0004587 KEGG: 00330+2.6.1.13|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|MetaCyc: PWY-6922|Reactome: R-HSA-70614 COP00_18365 0b2088156c709634c18466885beb6849 400 Gene3D G3DSA:3.40.640.10 61 309 1.1E-152 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 COP00_18365 0b2088156c709634c18466885beb6849 400 SUPERFAMILY SSF53383 5 399 5.38E-126 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase COP00_18365 0b2088156c709634c18466885beb6849 400 Gene3D G3DSA:3.90.1150.10 26 388 1.1E-152 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 COP00_18365 0b2088156c709634c18466885beb6849 400 Hamap MF_01689 Ornithine aminotransferase [rocD]. 7 399 66.544 T 13-10-2018 IPR034757 Ornithine aminotransferase, bacterial type GO:0004587 KEGG: 00330+2.6.1.13|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|MetaCyc: PWY-6922 COP00_18365 0b2088156c709634c18466885beb6849 400 PIRSF PIRSF000521 2 163 1.5E-8 T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 COP00_18365 0b2088156c709634c18466885beb6849 400 PIRSF PIRSF000521 177 400 8.7E-31 T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 COP00_09915 b25175675d9092740ffd7f41a65e1219 311 TIGRFAM TIGR00751 menA: 1,4-dihydroxy-2-naphthoate octaprenyltransferase 27 303 4.6E-36 T 13-10-2018 COP00_09915 b25175675d9092740ffd7f41a65e1219 311 Hamap MF_01937 1,4-dihydroxy-2-naphthoate octaprenyltransferase [menA]. 18 305 19.547 T 13-10-2018 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase GO:0009234|GO:0016021|GO:0046428 KEGG: 00130+2.5.1.74|MetaCyc: PWY-5839|MetaCyc: PWY-5851|MetaCyc: PWY-5852|MetaCyc: PWY-5853|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 COP00_09915 b25175675d9092740ffd7f41a65e1219 311 Pfam PF01040 UbiA prenyltransferase family 35 266 3.4E-39 T 13-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 COP00_09915 b25175675d9092740ffd7f41a65e1219 311 PIRSF PIRSF005355 12 310 1.1E-87 T 13-10-2018 IPR026046 UbiA prenyltransferase domain containing protein 1 GO:0004659 Reactome: R-HSA-6806664 COP00_08545 1946bb56afcc721d8069b5399c8cd80d 313 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 3 295 39.846 T 13-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 COP00_08545 1946bb56afcc721d8069b5399c8cd80d 313 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 226 293 1.9E-19 T 13-10-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 COP00_08545 1946bb56afcc721d8069b5399c8cd80d 313 SUPERFAMILY SSF54782 219 309 5.75E-23 T 13-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 COP00_08545 1946bb56afcc721d8069b5399c8cd80d 313 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 4 295 6.6E-115 T 13-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 COP00_08545 1946bb56afcc721d8069b5399c8cd80d 313 Gene3D G3DSA:3.40.190.10 101 201 7.8E-90 T 13-10-2018 COP00_08545 1946bb56afcc721d8069b5399c8cd80d 313 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 230 246 - T 13-10-2018 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 COP00_08545 1946bb56afcc721d8069b5399c8cd80d 313 PIRSF PIRSF001438 1 310 8.3E-128 T 13-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 COP00_08545 1946bb56afcc721d8069b5399c8cd80d 313 SUPERFAMILY SSF53850 2 217 8.93E-86 T 13-10-2018 COP00_08545 1946bb56afcc721d8069b5399c8cd80d 313 PRINTS PR00151 Porphobilinogen deaminase signature 74 93 1.5E-49 T 13-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 COP00_08545 1946bb56afcc721d8069b5399c8cd80d 313 PRINTS PR00151 Porphobilinogen deaminase signature 141 158 1.5E-49 T 13-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 COP00_08545 1946bb56afcc721d8069b5399c8cd80d 313 PRINTS PR00151 Porphobilinogen deaminase signature 122 139 1.5E-49 T 13-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 COP00_08545 1946bb56afcc721d8069b5399c8cd80d 313 PRINTS PR00151 Porphobilinogen deaminase signature 229 246 1.5E-49 T 13-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 COP00_08545 1946bb56afcc721d8069b5399c8cd80d 313 PRINTS PR00151 Porphobilinogen deaminase signature 43 63 1.5E-49 T 13-10-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 COP00_08545 1946bb56afcc721d8069b5399c8cd80d 313 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 4 211 1.8E-83 T 13-10-2018 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 COP00_08545 1946bb56afcc721d8069b5399c8cd80d 313 Gene3D G3DSA:3.30.160.40 221 304 4.8E-28 T 13-10-2018 IPR036803 Porphobilinogen deaminase, C-terminal domain superfamily GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 COP00_08545 1946bb56afcc721d8069b5399c8cd80d 313 Gene3D G3DSA:3.40.190.10 4 209 7.8E-90 T 13-10-2018 COP00_20545 4486a30f69a6d02be027395221f7887f 260 TIGRFAM TIGR01204 bioW: 6-carboxyhexanoate--CoA ligase 20 250 5.1E-99 T 13-10-2018 IPR005499 6-carboxyhexanoate--CoA ligase GO:0005524|GO:0009102|GO:0042410 KEGG: 00780+6.2.1.14|MetaCyc: PWY-6578 COP00_20545 4486a30f69a6d02be027395221f7887f 260 Pfam PF03744 6-carboxyhexanoate--CoA ligase 7 250 6.9E-85 T 13-10-2018 IPR005499 6-carboxyhexanoate--CoA ligase GO:0005524|GO:0009102|GO:0042410 KEGG: 00780+6.2.1.14|MetaCyc: PWY-6578 COP00_20545 4486a30f69a6d02be027395221f7887f 260 Hamap MF_00668 6-carboxyhexanoate--CoA ligase [bioW]. 6 251 53.553 T 13-10-2018 IPR005499 6-carboxyhexanoate--CoA ligase GO:0005524|GO:0009102|GO:0042410 KEGG: 00780+6.2.1.14|MetaCyc: PWY-6578 COP00_20545 4486a30f69a6d02be027395221f7887f 260 ProDom PD017229 LIGASE SYNTHASE BIOTIN MAGNESIUM PIMELOYL-COA 6-CARBOXYHEXANOATE--COA BIOSYNTHESIS 6-CARBOXYHEXANOATE-COA BIOW COA 1 224 9.0E-95 T 13-10-2018 IPR005499 6-carboxyhexanoate--CoA ligase GO:0005524|GO:0009102|GO:0042410 KEGG: 00780+6.2.1.14|MetaCyc: PWY-6578 COP00_15505 6a9c0dd7562ee044565b1c268e3d29ca 509 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 209 482 7.0E-45 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 COP00_15505 6a9c0dd7562ee044565b1c268e3d29ca 509 Pfam PF13192 Thioredoxin domain 125 192 5.1E-8 T 13-10-2018 IPR012336 Thioredoxin-like fold COP00_15505 6a9c0dd7562ee044565b1c268e3d29ca 509 TIGRFAM TIGR03140 AhpF: alkyl hydroperoxide reductase subunit F 3 509 6.4E-244 T 13-10-2018 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0050660|GO:0051287 COP00_15505 6a9c0dd7562ee044565b1c268e3d29ca 509 SUPERFAMILY SSF51905 197 505 8.25E-52 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily COP00_15505 6a9c0dd7562ee044565b1c268e3d29ca 509 PIRSF PIRSF000238 2 509 5.9E-260 T 13-10-2018 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0050660|GO:0051287 COP00_15505 6a9c0dd7562ee044565b1c268e3d29ca 509 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 242 257 4.2E-66 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 COP00_15505 6a9c0dd7562ee044565b1c268e3d29ca 509 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 469 487 4.2E-66 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 COP00_15505 6a9c0dd7562ee044565b1c268e3d29ca 509 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 345 369 4.2E-66 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 COP00_15505 6a9c0dd7562ee044565b1c268e3d29ca 509 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 330 342 4.2E-66 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 COP00_15505 6a9c0dd7562ee044565b1c268e3d29ca 509 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 210 232 4.2E-66 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 COP00_15505 6a9c0dd7562ee044565b1c268e3d29ca 509 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 435 456 4.2E-66 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 COP00_15505 6a9c0dd7562ee044565b1c268e3d29ca 509 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 397 413 4.2E-66 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 COP00_15505 6a9c0dd7562ee044565b1c268e3d29ca 509 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 308 316 4.2E-66 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 COP00_15505 6a9c0dd7562ee044565b1c268e3d29ca 509 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 262 272 4.2E-66 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 COP00_15505 6a9c0dd7562ee044565b1c268e3d29ca 509 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 349 367 5.9E-39 T 13-10-2018 COP00_15505 6a9c0dd7562ee044565b1c268e3d29ca 509 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 211 230 5.9E-39 T 13-10-2018 COP00_15505 6a9c0dd7562ee044565b1c268e3d29ca 509 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 307 325 5.9E-39 T 13-10-2018 COP00_15505 6a9c0dd7562ee044565b1c268e3d29ca 509 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 433 449 5.9E-39 T 13-10-2018 COP00_15505 6a9c0dd7562ee044565b1c268e3d29ca 509 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 459 481 5.9E-39 T 13-10-2018 COP00_15505 6a9c0dd7562ee044565b1c268e3d29ca 509 Gene3D G3DSA:3.40.30.80 2 199 3.7E-62 T 13-10-2018 COP00_15505 6a9c0dd7562ee044565b1c268e3d29ca 509 Gene3D G3DSA:3.50.50.60 319 441 3.7E-108 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily COP00_15505 6a9c0dd7562ee044565b1c268e3d29ca 509 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 337 357 - T 13-10-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 COP00_15505 6a9c0dd7562ee044565b1c268e3d29ca 509 SUPERFAMILY SSF52833 3 101 1.01E-28 T 13-10-2018 IPR036249 Thioredoxin-like superfamily COP00_15505 6a9c0dd7562ee044565b1c268e3d29ca 509 SUPERFAMILY SSF52833 103 194 8.54E-24 T 13-10-2018 IPR036249 Thioredoxin-like superfamily COP00_15505 6a9c0dd7562ee044565b1c268e3d29ca 509 Gene3D G3DSA:3.50.50.60 209 499 3.7E-108 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily COP00_11295 cf961e99358f50b6b237248109f9cd3d 339 Pfam PF01032 FecCD transport family 22 337 1.8E-95 T 13-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 COP00_11295 cf961e99358f50b6b237248109f9cd3d 339 SUPERFAMILY SSF81345 8 337 1.05E-87 T 13-10-2018 IPR037294 ABC transporter, BtuC-like COP00_11295 cf961e99358f50b6b237248109f9cd3d 339 Gene3D G3DSA:1.10.3470.10 8 339 6.3E-101 T 13-10-2018 IPR037294 ABC transporter, BtuC-like COP00_21440 4334aff58038a76bb6b06763dd44c900 89 ProSitePatterns PS00527 Ribosomal protein S14 signature. 51 73 - T 13-10-2018 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 COP00_21440 4334aff58038a76bb6b06763dd44c900 89 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 89 25.564 T 13-10-2018 IPR023036 Ribosomal protein S14, bacterial/plastid COP00_21440 4334aff58038a76bb6b06763dd44c900 89 Pfam PF00253 Ribosomal protein S14p/S29e 36 88 4.3E-28 T 13-10-2018 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 COP00_21440 4334aff58038a76bb6b06763dd44c900 89 SUPERFAMILY SSF57716 2 89 1.85E-32 T 13-10-2018 COP00_21440 4334aff58038a76bb6b06763dd44c900 89 Gene3D G3DSA:4.10.830.10 28 89 6.5E-26 T 13-10-2018 COP00_00180 d5394856aaf697cb1641a37acd62853b 323 Gene3D G3DSA:3.40.50.2300 158 285 2.2E-57 T 13-10-2018 COP00_00180 d5394856aaf697cb1641a37acd62853b 323 Gene3D G3DSA:1.10.260.40 1 57 1.4E-19 T 13-10-2018 COP00_00180 d5394856aaf697cb1641a37acd62853b 323 SUPERFAMILY SSF53822 61 323 1.18E-54 T 13-10-2018 IPR028082 Periplasmic binding protein-like I COP00_00180 d5394856aaf697cb1641a37acd62853b 323 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 48 4.1E-17 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 COP00_00180 d5394856aaf697cb1641a37acd62853b 323 SMART SM00354 1 71 1.5E-28 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 COP00_00180 d5394856aaf697cb1641a37acd62853b 323 SUPERFAMILY SSF47413 1 59 5.2E-17 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 COP00_00180 d5394856aaf697cb1641a37acd62853b 323 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 7.2E-5 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 COP00_00180 d5394856aaf697cb1641a37acd62853b 323 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 7.2E-5 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 COP00_00180 d5394856aaf697cb1641a37acd62853b 323 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 13-10-2018 COP00_00180 d5394856aaf697cb1641a37acd62853b 323 Gene3D G3DSA:3.40.50.2300 62 303 2.2E-57 T 13-10-2018 COP00_00180 d5394856aaf697cb1641a37acd62853b 323 Pfam PF13377 Periplasmic binding protein-like domain 167 323 1.4E-23 T 13-10-2018 COP00_18955 dd29c05a76de4e81bbbfb520c4f47822 347 Pfam PF01594 AI-2E family transporter 15 334 1.8E-56 T 13-10-2018 IPR002549 Transmembrane protein TqsA-like COP00_12060 14e9487e5b6c61039a8e95522a6e1926 229 Pfam PF12679 ABC-2 family transporter protein 3 228 5.8E-9 T 13-10-2018 IPR032688 ABC-2 family transporter protein GO:0055085 COP00_02880 c481d567f252ac6bf1e50e3ddc783381 372 Pfam PF13479 AAA domain 17 251 3.3E-30 T 13-10-2018 COP00_02880 c481d567f252ac6bf1e50e3ddc783381 372 Gene3D G3DSA:3.40.50.300 9 225 9.0E-7 T 13-10-2018 COP00_02880 c481d567f252ac6bf1e50e3ddc783381 372 SUPERFAMILY SSF52540 16 171 2.88E-8 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_02880 c481d567f252ac6bf1e50e3ddc783381 372 SMART SM00382 16 157 2.2E-4 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_22340 e81dd6be5f17fd5abeda1a5133f17348 77 Gene3D G3DSA:4.10.810.10 20 77 2.9E-11 T 13-10-2018 IPR027393 Virus scaffolding protein, C-terminal GO:0005515 COP00_22340 e81dd6be5f17fd5abeda1a5133f17348 77 Pfam PF08858 IDEAL domain 34 70 1.7E-13 T 13-10-2018 IPR014957 IDEAL domain COP00_22340 e81dd6be5f17fd5abeda1a5133f17348 77 SMART SM00914 34 70 4.1E-11 T 13-10-2018 IPR014957 IDEAL domain COP00_20305 b593d3780ebd68d86f643e8b73e98e98 492 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 33 431 5.7E-98 T 13-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 COP00_20305 b593d3780ebd68d86f643e8b73e98e98 492 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 413 433 - T 13-10-2018 IPR018212 Sodium/solute symporter, conserved site COP00_20305 b593d3780ebd68d86f643e8b73e98e98 492 TIGRFAM TIGR02121 Na_Pro_sym: sodium/proline symporter 4 488 1.1E-226 T 13-10-2018 IPR011851 Sodium/proline symporter GO:0005298|GO:0006814|GO:0015824|GO:0016021|GO:0031402 COP00_20305 b593d3780ebd68d86f643e8b73e98e98 492 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 155 180 - T 13-10-2018 IPR018212 Sodium/solute symporter, conserved site COP00_20305 b593d3780ebd68d86f643e8b73e98e98 492 Pfam PF00474 Sodium:solute symporter family 33 431 3.4E-108 T 13-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 COP00_20305 b593d3780ebd68d86f643e8b73e98e98 492 Gene3D G3DSA:1.20.1730.10 21 491 2.2E-99 T 13-10-2018 IPR038377 Sodium/glucose symporter superfamily COP00_15810 c50cdda72345e15314a325748affcbcc 660 Gene3D G3DSA:3.30.450.20 53 161 8.1E-35 T 13-10-2018 COP00_15810 c50cdda72345e15314a325748affcbcc 660 Pfam PF02272 DHHA1 domain 518 650 3.5E-14 T 13-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 COP00_15810 c50cdda72345e15314a325748affcbcc 660 Gene3D G3DSA:3.10.310.30 549 656 7.9E-8 T 13-10-2018 COP00_15810 c50cdda72345e15314a325748affcbcc 660 Pfam PF01368 DHH family 339 496 4.9E-22 T 13-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 COP00_15810 c50cdda72345e15314a325748affcbcc 660 Gene3D G3DSA:3.90.1640.10 322 541 4.4E-54 T 13-10-2018 COP00_15810 c50cdda72345e15314a325748affcbcc 660 SMART SM00267 132 299 3.6E-11 T 13-10-2018 IPR000160 GGDEF domain COP00_15810 c50cdda72345e15314a325748affcbcc 660 PIRSF PIRSF026583 1 660 4.3E-273 T 13-10-2018 IPR014528 Cyclic-di-AMP phosphodiesterase GdpP/PdeA COP00_15810 c50cdda72345e15314a325748affcbcc 660 SUPERFAMILY SSF64182 339 645 2.62E-67 T 13-10-2018 IPR038763 DHH phosphoesterase superfamily COP00_13750 cd3f622568b209e4c17d47bf1f507a1b 263 SUPERFAMILY SSF53927 6 260 1.08E-75 T 13-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 COP00_13750 cd3f622568b209e4c17d47bf1f507a1b 263 PIRSF PIRSF015626 1 263 2.5E-80 T 13-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 COP00_13750 cd3f622568b209e4c17d47bf1f507a1b 263 Hamap MF_00187 Sulfur carrier protein FdhD [fdhD]. 3 261 31.881 T 13-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 COP00_13750 cd3f622568b209e4c17d47bf1f507a1b 263 Pfam PF02634 FdhD/NarQ family 28 260 2.8E-76 T 13-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 COP00_13750 cd3f622568b209e4c17d47bf1f507a1b 263 Gene3D G3DSA:3.40.140.10 115 263 3.3E-49 T 13-10-2018 COP00_13750 cd3f622568b209e4c17d47bf1f507a1b 263 TIGRFAM TIGR00129 fdhD_narQ: formate dehydrogenase family accessory protein FdhD 23 261 1.2E-87 T 13-10-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 COP00_13750 cd3f622568b209e4c17d47bf1f507a1b 263 Gene3D G3DSA:3.10.20.10 29 111 1.1E-14 T 13-10-2018 COP00_21495 f7127366c80cf836a592216f06cc6998 210 Gene3D G3DSA:2.40.30.170 112 209 4.8E-21 T 13-10-2018 COP00_21495 f7127366c80cf836a592216f06cc6998 210 SUPERFAMILY SSF111369 84 208 5.23E-6 T 13-10-2018 COP00_21495 f7127366c80cf836a592216f06cc6998 210 Gene3D G3DSA:2.40.50.100 48 111 6.4E-11 T 13-10-2018 COP00_21495 f7127366c80cf836a592216f06cc6998 210 SUPERFAMILY SSF51230 39 111 4.23E-8 T 13-10-2018 IPR011053 Single hybrid motif COP00_21495 f7127366c80cf836a592216f06cc6998 210 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 44 159 1.6E-17 T 13-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain COP00_13860 e0fa7a498938490c781525c7f7b47210 149 SUPERFAMILY SSF89623 1 148 9.68E-58 T 13-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 COP00_13860 e0fa7a498938490c781525c7f7b47210 149 Pfam PF02502 Ribose/Galactose Isomerase 3 141 1.7E-55 T 13-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 COP00_13860 e0fa7a498938490c781525c7f7b47210 149 TIGRFAM TIGR00689 rpiB_lacA_lacB: sugar-phosphate isomerase, RpiB/LacA/LacB family 3 146 1.5E-62 T 13-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 COP00_13860 e0fa7a498938490c781525c7f7b47210 149 TIGRFAM TIGR01120 rpiB: ribose 5-phosphate isomerase B 2 144 2.4E-51 T 13-10-2018 IPR004785 Ribose 5-phosphate isomerase B GO:0004751|GO:0006098 COP00_13860 e0fa7a498938490c781525c7f7b47210 149 PIRSF PIRSF005384 1 148 5.6E-58 T 13-10-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 COP00_13860 e0fa7a498938490c781525c7f7b47210 149 Gene3D G3DSA:3.40.1400.10 1 149 2.4E-60 T 13-10-2018 IPR036569 Sugar-phosphate isomerase, RpiB/LacA/LacB superfamily GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 COP00_09865 130852e3b7bd8f0654e31e10a425cdfc 224 Gene3D G3DSA:1.10.3720.10 2 220 9.2E-58 T 13-10-2018 IPR035906 MetI-like superfamily COP00_09865 130852e3b7bd8f0654e31e10a425cdfc 224 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 35 219 1.9E-24 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 COP00_09865 130852e3b7bd8f0654e31e10a425cdfc 224 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 13 113 1.3E-26 T 13-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 COP00_09865 130852e3b7bd8f0654e31e10a425cdfc 224 SUPERFAMILY SSF161098 14 210 1.11E-44 T 13-10-2018 IPR035906 MetI-like superfamily COP00_21600 634b28105967d69ba3474cd7cae801f8 190 TIGRFAM TIGR01076 sortase_fam: sortase 66 188 3.4E-37 T 13-10-2018 IPR005754 Sortase family COP00_21600 634b28105967d69ba3474cd7cae801f8 190 Gene3D G3DSA:2.40.260.10 24 190 3.4E-40 T 13-10-2018 IPR023365 Sortase domain superfamily COP00_21600 634b28105967d69ba3474cd7cae801f8 190 SUPERFAMILY SSF63817 57 189 1.83E-33 T 13-10-2018 IPR023365 Sortase domain superfamily COP00_21600 634b28105967d69ba3474cd7cae801f8 190 Pfam PF04203 Sortase family 68 189 2.4E-27 T 13-10-2018 IPR005754 Sortase family COP00_12030 8314a3214416acef64828ff5b8e89a35 291 SUPERFAMILY SSF46785 10 90 2.41E-20 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_12030 8314a3214416acef64828ff5b8e89a35 291 Pfam PF03466 LysR substrate binding domain 90 282 1.4E-29 T 13-10-2018 IPR005119 LysR, substrate-binding COP00_12030 8314a3214416acef64828ff5b8e89a35 291 Gene3D G3DSA:3.40.190.290 95 290 6.7E-23 T 13-10-2018 COP00_12030 8314a3214416acef64828ff5b8e89a35 291 Gene3D G3DSA:1.10.10.10 8 86 3.6E-22 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_12030 8314a3214416acef64828ff5b8e89a35 291 SUPERFAMILY SSF53850 90 289 7.41E-27 T 13-10-2018 COP00_12030 8314a3214416acef64828ff5b8e89a35 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 7.9E-7 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 COP00_12030 8314a3214416acef64828ff5b8e89a35 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 7.9E-7 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 COP00_12030 8314a3214416acef64828ff5b8e89a35 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 7.9E-7 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 COP00_12030 8314a3214416acef64828ff5b8e89a35 291 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 65 3.9E-18 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 COP00_15100 97da9b98c5bac2b81fa3c4652b34feb3 350 Gene3D G3DSA:2.60.120.380 55 178 1.7E-6 T 13-10-2018 COP00_09000 10355944f7817ccf295c4bd1cfb6c17b 263 Gene3D G3DSA:1.20.120.710 14 130 8.7E-51 T 13-10-2018 COP00_09000 10355944f7817ccf295c4bd1cfb6c17b 263 Gene3D G3DSA:3.40.50.1000 2 254 8.7E-51 T 13-10-2018 IPR023214 HAD superfamily COP00_09000 10355944f7817ccf295c4bd1cfb6c17b 263 Pfam PF13419 Haloacid dehalogenase-like hydrolase 4 231 9.1E-22 T 13-10-2018 COP00_09000 10355944f7817ccf295c4bd1cfb6c17b 263 SUPERFAMILY SSF56784 1 258 2.42E-42 T 13-10-2018 IPR036412 HAD-like superfamily COP00_09000 10355944f7817ccf295c4bd1cfb6c17b 263 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 128 231 4.4E-9 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 COP00_09000 10355944f7817ccf295c4bd1cfb6c17b 263 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 135 225 3.3E-13 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 COP00_11320 2015f644470a656bdf9d86bd956bd429 619 PIRSF PIRSF005091 1 619 1.6E-182 T 13-10-2018 IPR012160 Lipoteichoic acid synthase-like COP00_11320 2015f644470a656bdf9d86bd956bd429 619 Gene3D G3DSA:3.40.720.10 236 544 1.1E-70 T 13-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 COP00_11320 2015f644470a656bdf9d86bd956bd429 619 Pfam PF00884 Sulfatase 243 535 9.1E-32 T 13-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 COP00_11320 2015f644470a656bdf9d86bd956bd429 619 SUPERFAMILY SSF53649 241 617 6.38E-64 T 13-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 COP00_00060 1a3645b35ff51313cb786efc4aec530e 508 Pfam PF06605 Prophage endopeptidase tail 29 328 4.2E-69 T 13-10-2018 IPR010572 Prophage tail endopeptidase COP00_00060 1a3645b35ff51313cb786efc4aec530e 508 Gene3D G3DSA:2.40.10.280 24 83 6.0E-8 T 13-10-2018 COP00_00060 1a3645b35ff51313cb786efc4aec530e 508 Gene3D G3DSA:3.55.50.40 85 172 1.8E-12 T 13-10-2018 COP00_04150 4d52b260105a0bb4820d28fd092a3ef7 741 Pfam PF02901 Pyruvate formate lyase-like 15 600 1.9E-210 T 13-10-2018 IPR004184 Pyruvate formate lyase domain GO:0003824 COP00_04150 4d52b260105a0bb4820d28fd092a3ef7 741 Pfam PF01228 Glycine radical 616 722 4.0E-42 T 13-10-2018 IPR001150 Glycine radical domain GO:0003824 COP00_04150 4d52b260105a0bb4820d28fd092a3ef7 741 SUPERFAMILY SSF51998 1 741 4.58E-290 T 13-10-2018 COP00_04150 4d52b260105a0bb4820d28fd092a3ef7 741 TIGRFAM TIGR01255 pyr_form_ly_1: formate acetyltransferase 3 741 0.0 T 13-10-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 COP00_04150 4d52b260105a0bb4820d28fd092a3ef7 741 Gene3D G3DSA:3.20.70.20 1 741 0.0 T 13-10-2018 COP00_04150 4d52b260105a0bb4820d28fd092a3ef7 741 PIRSF PIRSF000379 1 741 0.0 T 13-10-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 COP00_04150 4d52b260105a0bb4820d28fd092a3ef7 741 ProSitePatterns PS00850 Glycine radical domain signature. 711 719 - T 13-10-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site COP00_06515 339210ee4ea5f210d1ef6ca150c07414 364 SUPERFAMILY SSF53223 4 143 1.44E-49 T 13-10-2018 COP00_06515 339210ee4ea5f210d1ef6ca150c07414 364 SMART SM00839 144 351 1.9E-74 T 13-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 COP00_06515 339210ee4ea5f210d1ef6ca150c07414 364 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 219 298 8.4E-9 T 13-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 COP00_06515 339210ee4ea5f210d1ef6ca150c07414 364 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 148 200 4.1E-7 T 13-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 COP00_06515 339210ee4ea5f210d1ef6ca150c07414 364 Gene3D G3DSA:3.40.50.10860 10 343 1.0E-154 T 13-10-2018 COP00_06515 339210ee4ea5f210d1ef6ca150c07414 364 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 22 130 8.5E-28 T 13-10-2018 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 COP00_06515 339210ee4ea5f210d1ef6ca150c07414 364 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 74 87 - T 13-10-2018 IPR033524 Leu/Phe/Val dehydrogenases active site Reactome: R-HSA-2151201|Reactome: R-HSA-70614 COP00_06515 339210ee4ea5f210d1ef6ca150c07414 364 PIRSF PIRSF000188 1 353 7.3E-168 T 13-10-2018 IPR016211 Glutamate/phenylalanine/leucine/valine dehydrogenase, bacterial/archaeal GO:0016639|GO:0055114 COP00_06515 339210ee4ea5f210d1ef6ca150c07414 364 SUPERFAMILY SSF51735 141 348 4.9E-59 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily COP00_06515 339210ee4ea5f210d1ef6ca150c07414 364 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 132 154 1.7E-22 T 13-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 COP00_06515 339210ee4ea5f210d1ef6ca150c07414 364 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 176 196 1.7E-22 T 13-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 COP00_06515 339210ee4ea5f210d1ef6ca150c07414 364 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 286 297 1.7E-22 T 13-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 COP00_06515 339210ee4ea5f210d1ef6ca150c07414 364 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 66 80 1.7E-22 T 13-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 COP00_06515 339210ee4ea5f210d1ef6ca150c07414 364 Gene3D G3DSA:3.40.50.720 134 336 1.0E-154 T 13-10-2018 COP00_18015 dc966693c7e0b46125032019b11c7e73 466 PIRSF PIRSF020967 86 250 5.8E-21 T 13-10-2018 IPR011214 Uncharacterised conserved protein UCP020967 COP00_18015 dc966693c7e0b46125032019b11c7e73 466 PIRSF PIRSF020967 265 429 7.8E-13 T 13-10-2018 IPR011214 Uncharacterised conserved protein UCP020967 COP00_18015 dc966693c7e0b46125032019b11c7e73 466 PIRSF PIRSF020967 3 59 3.0E-12 T 13-10-2018 IPR011214 Uncharacterised conserved protein UCP020967 COP00_18015 dc966693c7e0b46125032019b11c7e73 466 Pfam PF12500 TRSP domain C terminus to PRTase_2 293 413 1.2E-38 T 13-10-2018 IPR022537 TRSP domain COP00_18015 dc966693c7e0b46125032019b11c7e73 466 Pfam PF15609 Phosphoribosyl transferase 19 239 4.6E-70 T 13-10-2018 COP00_18015 dc966693c7e0b46125032019b11c7e73 466 Gene3D G3DSA:3.40.50.2020 75 233 4.0E-6 T 13-10-2018 COP00_18015 dc966693c7e0b46125032019b11c7e73 466 SUPERFAMILY SSF53271 107 214 5.4E-9 T 13-10-2018 IPR029057 Phosphoribosyltransferase-like COP00_07345 59326858f1ddae62985981f177227d9f 400 Pfam PF07454 Stage II sporulation protein P (SpoIIP) 103 379 2.2E-74 T 13-10-2018 IPR010897 Sporulation stage II, protein P COP00_07345 59326858f1ddae62985981f177227d9f 400 TIGRFAM TIGR02867 spore_II_P: stage II sporulation protein P 180 383 9.3E-73 T 13-10-2018 IPR010897 Sporulation stage II, protein P COP00_07345 59326858f1ddae62985981f177227d9f 400 SUPERFAMILY SSF53187 259 382 4.08E-9 T 13-10-2018 COP00_05110 d45b98f9090610fe0291fb81692bce01 452 Gene3D G3DSA:3.90.1150.10 14 434 4.1E-138 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 COP00_05110 d45b98f9090610fe0291fb81692bce01 452 Gene3D G3DSA:3.40.640.10 48 323 4.1E-138 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 COP00_05110 d45b98f9090610fe0291fb81692bce01 452 Pfam PF00202 Aminotransferase class-III 15 432 1.2E-98 T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 COP00_05110 d45b98f9090610fe0291fb81692bce01 452 SUPERFAMILY SSF53383 14 436 1.94E-114 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase COP00_05110 d45b98f9090610fe0291fb81692bce01 452 PIRSF PIRSF000521 12 437 4.5E-35 T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 COP00_05110 d45b98f9090610fe0291fb81692bce01 452 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 236 273 - T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 COP00_08340 44b8e2639bbbd8eaa550f6931c6fecdd 154 Gene3D G3DSA:1.20.120.450 1 144 1.3E-40 T 13-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes COP00_08340 44b8e2639bbbd8eaa550f6931c6fecdd 154 Pfam PF05163 DinB family 1 151 1.4E-29 T 13-10-2018 IPR007837 DNA damage-inducible protein DinB COP00_08340 44b8e2639bbbd8eaa550f6931c6fecdd 154 SUPERFAMILY SSF109854 1 150 7.02E-34 T 13-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes COP00_22790 445bff1427bb14bb5f83c9f5852707ba 312 Gene3D G3DSA:3.40.47.10 1 312 2.2E-133 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 COP00_22790 445bff1427bb14bb5f83c9f5852707ba 312 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 1 310 72.146 T 13-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 COP00_22790 445bff1427bb14bb5f83c9f5852707ba 312 SUPERFAMILY SSF53901 3 310 2.36E-73 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 COP00_22790 445bff1427bb14bb5f83c9f5852707ba 312 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 106 184 1.3E-31 T 13-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 COP00_22790 445bff1427bb14bb5f83c9f5852707ba 312 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 221 310 5.7E-36 T 13-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 COP00_22790 445bff1427bb14bb5f83c9f5852707ba 312 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 1 310 3.9E-143 T 13-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 COP00_05940 ab1ed368a471a7463e0ea049d05a447b 383 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 26 251 3.7E-75 T 13-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 COP00_05940 ab1ed368a471a7463e0ea049d05a447b 383 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 268 356 3.5E-7 T 13-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 COP00_05940 ab1ed368a471a7463e0ea049d05a447b 383 SUPERFAMILY SSF56601 1 268 1.2E-67 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like COP00_05940 ab1ed368a471a7463e0ea049d05a447b 383 SMART SM00936 268 358 0.0018 T 13-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 COP00_05940 ab1ed368a471a7463e0ea049d05a447b 383 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 135 148 2.8E-16 T 13-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 COP00_05940 ab1ed368a471a7463e0ea049d05a447b 383 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 108 125 2.8E-16 T 13-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 COP00_05940 ab1ed368a471a7463e0ea049d05a447b 383 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 60 71 2.8E-16 T 13-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 COP00_05940 ab1ed368a471a7463e0ea049d05a447b 383 Gene3D G3DSA:3.40.710.10 32 267 5.6E-89 T 13-10-2018 COP00_05940 ab1ed368a471a7463e0ea049d05a447b 383 Gene3D G3DSA:2.30.140.30 268 359 1.7E-31 T 13-10-2018 COP00_16440 19fd1588fe74db45b62cd74ef2761d57 499 Pfam PF01336 OB-fold nucleic acid binding domain 65 141 1.8E-13 T 13-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 COP00_16440 19fd1588fe74db45b62cd74ef2761d57 499 PIRSF PIRSF039101 1 499 3.8E-202 T 13-10-2018 IPR034762 Bacterial/eukaryotic lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 COP00_16440 19fd1588fe74db45b62cd74ef2761d57 499 Gene3D G3DSA:3.30.930.10 152 496 1.9E-140 T 13-10-2018 COP00_16440 19fd1588fe74db45b62cd74ef2761d57 499 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 10 498 6.9E-231 T 13-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 COP00_16440 19fd1588fe74db45b62cd74ef2761d57 499 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 17 499 46.643 T 13-10-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 COP00_16440 19fd1588fe74db45b62cd74ef2761d57 499 SUPERFAMILY SSF50249 10 151 2.45E-44 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold COP00_16440 19fd1588fe74db45b62cd74ef2761d57 499 PRINTS PR00982 Lysyl-tRNA synthetase signature 211 227 3.8E-40 T 13-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 COP00_16440 19fd1588fe74db45b62cd74ef2761d57 499 PRINTS PR00982 Lysyl-tRNA synthetase signature 240 253 3.8E-40 T 13-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 COP00_16440 19fd1588fe74db45b62cd74ef2761d57 499 PRINTS PR00982 Lysyl-tRNA synthetase signature 258 275 3.8E-40 T 13-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 COP00_16440 19fd1588fe74db45b62cd74ef2761d57 499 PRINTS PR00982 Lysyl-tRNA synthetase signature 195 205 3.8E-40 T 13-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 COP00_16440 19fd1588fe74db45b62cd74ef2761d57 499 PRINTS PR00982 Lysyl-tRNA synthetase signature 381 397 3.8E-40 T 13-10-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 COP00_16440 19fd1588fe74db45b62cd74ef2761d57 499 Pfam PF00152 tRNA synthetases class II (D, K and N) 160 496 4.3E-85 T 13-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 COP00_16440 19fd1588fe74db45b62cd74ef2761d57 499 Gene3D G3DSA:2.40.50.140 11 151 2.0E-45 T 13-10-2018 COP00_16440 19fd1588fe74db45b62cd74ef2761d57 499 SUPERFAMILY SSF55681 158 497 7.28E-126 T 13-10-2018 COP00_13455 8521cc7ad5b557806ea869a63f8b4cf5 158 Gene3D G3DSA:1.10.10.10 4 65 1.1E-19 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_13455 8521cc7ad5b557806ea869a63f8b4cf5 158 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 12 28 9.2E-16 T 13-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 COP00_13455 8521cc7ad5b557806ea869a63f8b4cf5 158 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 39 9.2E-16 T 13-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 COP00_13455 8521cc7ad5b557806ea869a63f8b4cf5 158 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 39 58 9.2E-16 T 13-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 COP00_13455 8521cc7ad5b557806ea869a63f8b4cf5 158 Pfam PF13412 Winged helix-turn-helix DNA-binding 12 59 1.4E-15 T 13-10-2018 COP00_13455 8521cc7ad5b557806ea869a63f8b4cf5 158 ProSitePatterns PS00519 AsnC-type HTH domain signature. 30 56 - T 13-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site COP00_13455 8521cc7ad5b557806ea869a63f8b4cf5 158 Pfam PF01037 Lrp/AsnC ligand binding domain 79 148 5.7E-12 T 13-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain COP00_13455 8521cc7ad5b557806ea869a63f8b4cf5 158 Gene3D G3DSA:3.30.70.920 66 158 2.6E-14 T 13-10-2018 COP00_13455 8521cc7ad5b557806ea869a63f8b4cf5 158 SUPERFAMILY SSF46785 11 71 2.33E-15 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_13455 8521cc7ad5b557806ea869a63f8b4cf5 158 SUPERFAMILY SSF54909 73 151 5.09E-13 T 13-10-2018 IPR011008 Dimeric alpha-beta barrel COP00_13455 8521cc7ad5b557806ea869a63f8b4cf5 158 SMART SM00344 12 118 3.2E-44 T 13-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 COP00_12035 5975236bf224902572616e88a0df35c4 157 ProDom PD093362 MEMBRANE UNCHARACTERIZED YXJN HOMOLOG B.SUBTILIS PROTEIN TRANSMEMBRANE 17 149 3.0E-35 T 13-10-2018 IPR020223 Uncharacterised protein YxjN COP00_12035 5975236bf224902572616e88a0df35c4 157 Pfam PF07301 Protein of unknown function (DUF1453) 7 149 4.6E-5 T 13-10-2018 IPR009916 Protein of unknown function DUF1453 COP00_13520 96f206df8e9c9fd7effdb63bf96203d1 252 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 1.3E-5 T 13-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 COP00_13520 96f206df8e9c9fd7effdb63bf96203d1 252 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 1.3E-5 T 13-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 COP00_13520 96f206df8e9c9fd7effdb63bf96203d1 252 SUPERFAMILY SSF100950 75 231 1.26E-28 T 13-10-2018 IPR037171 NagB/RpiA transferase-like COP00_13520 96f206df8e9c9fd7effdb63bf96203d1 252 SMART SM00420 6 58 8.8E-14 T 13-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 COP00_13520 96f206df8e9c9fd7effdb63bf96203d1 252 Gene3D G3DSA:1.10.10.10 1 58 2.1E-7 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_13520 96f206df8e9c9fd7effdb63bf96203d1 252 SUPERFAMILY SSF46785 4 68 1.03E-13 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_13520 96f206df8e9c9fd7effdb63bf96203d1 252 SMART SM01134 73 232 8.9E-68 T 13-10-2018 COP00_13520 96f206df8e9c9fd7effdb63bf96203d1 252 Pfam PF00455 DeoR C terminal sensor domain 76 231 2.2E-51 T 13-10-2018 IPR014036 DeoR C-terminal sensor domain COP00_13520 96f206df8e9c9fd7effdb63bf96203d1 252 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 13-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 COP00_13520 96f206df8e9c9fd7effdb63bf96203d1 252 Pfam PF08220 DeoR-like helix-turn-helix domain 6 60 2.6E-16 T 13-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 COP00_00925 086185b491ea5e4fc6f899fb7a2a95c6 293 Pfam PF13649 Methyltransferase domain 104 177 1.4E-6 T 13-10-2018 COP00_00925 086185b491ea5e4fc6f899fb7a2a95c6 293 PIRSF PIRSF018249 2 293 3.9E-79 T 13-10-2018 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted GO:0008168 COP00_00925 086185b491ea5e4fc6f899fb7a2a95c6 293 SUPERFAMILY SSF53335 18 270 5.35E-24 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase COP00_00925 086185b491ea5e4fc6f899fb7a2a95c6 293 Gene3D G3DSA:3.40.50.150 18 291 1.1E-58 T 13-10-2018 COP00_09105 8f732e889cc588ccc36de760b16d6181 371 TIGRFAM TIGR02872 spore_ytvI: sporulation integral membrane protein YtvI 14 359 9.3E-105 T 13-10-2018 IPR014227 Putative transport protein YtvI-like COP00_09105 8f732e889cc588ccc36de760b16d6181 371 Pfam PF01594 AI-2E family transporter 16 356 2.3E-59 T 13-10-2018 IPR002549 Transmembrane protein TqsA-like COP00_12810 278644e7095df889515485ff7ea128c2 85 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 39 54 - T 13-10-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site COP00_12810 278644e7095df889515485ff7ea128c2 85 PRINTS PR00107 Phosphocarrier protein signature 53 70 4.7E-20 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like COP00_12810 278644e7095df889515485ff7ea128c2 85 PRINTS PR00107 Phosphocarrier protein signature 13 29 4.7E-20 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like COP00_12810 278644e7095df889515485ff7ea128c2 85 PRINTS PR00107 Phosphocarrier protein signature 38 53 4.7E-20 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like COP00_12810 278644e7095df889515485ff7ea128c2 85 Pfam PF00381 PTS HPr component phosphorylation site 3 82 2.1E-30 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like COP00_12810 278644e7095df889515485ff7ea128c2 85 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 81 1.0E-29 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like COP00_12810 278644e7095df889515485ff7ea128c2 85 Gene3D G3DSA:3.30.1340.10 1 85 3.0E-35 T 13-10-2018 IPR035895 HPr-like superfamily COP00_12810 278644e7095df889515485ff7ea128c2 85 SUPERFAMILY SSF55594 3 83 6.15E-28 T 13-10-2018 IPR035895 HPr-like superfamily COP00_16670 c1795362cca2bb42591213791bb075a6 395 Gene3D G3DSA:2.40.30.10 206 335 4.6E-55 T 13-10-2018 COP00_16670 c1795362cca2bb42591213791bb075a6 395 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 12 146 8.3E-16 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 COP00_16670 c1795362cca2bb42591213791bb075a6 395 Pfam PF00009 Elongation factor Tu GTP binding domain 10 201 1.1E-61 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 COP00_16670 c1795362cca2bb42591213791bb075a6 395 Gene3D G3DSA:2.40.30.10 339 394 3.6E-27 T 13-10-2018 COP00_16670 c1795362cca2bb42591213791bb075a6 395 Pfam PF03143 Elongation factor Tu C-terminal domain 299 393 1.3E-33 T 13-10-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal COP00_16670 c1795362cca2bb42591213791bb075a6 395 SUPERFAMILY SSF50465 303 395 1.18E-35 T 13-10-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal COP00_16670 c1795362cca2bb42591213791bb075a6 395 Pfam PF03144 Elongation factor Tu domain 2 225 294 3.9E-19 T 13-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 COP00_16670 c1795362cca2bb42591213791bb075a6 395 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 395 60.592 T 13-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 COP00_16670 c1795362cca2bb42591213791bb075a6 395 SUPERFAMILY SSF50447 203 302 3.14E-32 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily COP00_16670 c1795362cca2bb42591213791bb075a6 395 SUPERFAMILY SSF52540 10 226 8.18E-63 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_16670 c1795362cca2bb42591213791bb075a6 395 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 13-10-2018 IPR031157 Tr-type G domain, conserved site COP00_16670 c1795362cca2bb42591213791bb075a6 395 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 395 3.6E-236 T 13-10-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 COP00_16670 c1795362cca2bb42591213791bb075a6 395 Gene3D G3DSA:3.40.50.300 1 203 4.3E-72 T 13-10-2018 COP00_16670 c1795362cca2bb42591213791bb075a6 395 PRINTS PR00315 GTP-binding elongation factor signature 94 105 3.1E-25 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 COP00_16670 c1795362cca2bb42591213791bb075a6 395 PRINTS PR00315 GTP-binding elongation factor signature 58 66 3.1E-25 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 COP00_16670 c1795362cca2bb42591213791bb075a6 395 PRINTS PR00315 GTP-binding elongation factor signature 131 140 3.1E-25 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 COP00_16670 c1795362cca2bb42591213791bb075a6 395 PRINTS PR00315 GTP-binding elongation factor signature 78 88 3.1E-25 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 COP00_16670 c1795362cca2bb42591213791bb075a6 395 PRINTS PR00315 GTP-binding elongation factor signature 14 27 3.1E-25 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 COP00_15855 62aa6aa0faf358a1f587323671944824 366 Gene3D G3DSA:1.10.150.300 113 200 7.7E-162 T 13-10-2018 IPR023192 TGS-like domain superfamily Reactome: R-HSA-114608 COP00_15855 62aa6aa0faf358a1f587323671944824 366 Gene3D G3DSA:3.40.50.300 4 281 7.7E-162 T 13-10-2018 COP00_15855 62aa6aa0faf358a1f587323671944824 366 Pfam PF06071 Protein of unknown function (DUF933) 282 365 6.2E-41 T 13-10-2018 IPR013029 YchF, C-terminal domain Reactome: R-HSA-114608 COP00_15855 62aa6aa0faf358a1f587323671944824 366 SUPERFAMILY SSF52540 3 304 1.68E-90 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_15855 62aa6aa0faf358a1f587323671944824 366 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 366 8.7E-162 T 13-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 COP00_15855 62aa6aa0faf358a1f587323671944824 366 PIRSF PIRSF006641 1 366 1.2E-169 T 13-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 COP00_15855 62aa6aa0faf358a1f587323671944824 366 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 2.8E-36 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 COP00_15855 62aa6aa0faf358a1f587323671944824 366 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 2.8E-36 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 COP00_15855 62aa6aa0faf358a1f587323671944824 366 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 2.8E-36 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 COP00_15855 62aa6aa0faf358a1f587323671944824 366 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 2.8E-36 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 COP00_15855 62aa6aa0faf358a1f587323671944824 366 Pfam PF01926 50S ribosome-binding GTPase 5 124 2.1E-24 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 COP00_15855 62aa6aa0faf358a1f587323671944824 366 SUPERFAMILY SSF81271 282 363 6.54E-37 T 13-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 COP00_15855 62aa6aa0faf358a1f587323671944824 366 Gene3D G3DSA:3.10.20.30 48 364 7.7E-162 T 13-10-2018 IPR012675 Beta-grasp domain superfamily COP00_15855 62aa6aa0faf358a1f587323671944824 366 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 366 47.429 T 13-10-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 COP00_05545 a48b97f344664c2e4ad169ad62be1515 233 Pfam PF02585 GlcNAc-PI de-N-acetylase 5 121 6.2E-20 T 13-10-2018 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related Reactome: R-HSA-162710 COP00_05545 a48b97f344664c2e4ad169ad62be1515 233 TIGRFAM TIGR04001 thiol_BshB1: bacillithiol biosynthesis deacetylase BshB1 2 224 2.8E-100 T 13-10-2018 IPR023842 Bacillithiol biosynthesis deacetylase, BshB1 GO:0019213|GO:0071793 COP00_05545 a48b97f344664c2e4ad169ad62be1515 233 SUPERFAMILY SSF102588 2 227 2.35E-55 T 13-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 COP00_05545 a48b97f344664c2e4ad169ad62be1515 233 Gene3D G3DSA:3.40.50.10320 1 233 1.2E-85 T 13-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 COP00_13195 eb840dac5c49c8c6ca66df632ed0faaa 482 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 327 465 1.1E-7 T 13-10-2018 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain COP00_13195 eb840dac5c49c8c6ca66df632ed0faaa 482 Pfam PF13440 Polysaccharide biosynthesis protein 36 326 1.3E-72 T 13-10-2018 COP00_02000 6f77ff94730a531fd4bca340810d4dd5 3599 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 492 894 6.3E-125 T 13-10-2018 IPR010071 Amino acid adenylation domain COP00_02000 6f77ff94730a531fd4bca340810d4dd5 3599 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 2558 2953 1.3E-131 T 13-10-2018 IPR010071 Amino acid adenylation domain COP00_02000 6f77ff94730a531fd4bca340810d4dd5 3599 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 1527 1930 1.0E-133 T 13-10-2018 IPR010071 Amino acid adenylation domain COP00_02000 6f77ff94730a531fd4bca340810d4dd5 3599 Gene3D G3DSA:3.30.300.30 1901 1997 4.4E-30 T 13-10-2018 COP00_02000 6f77ff94730a531fd4bca340810d4dd5 3599 Gene3D G3DSA:3.30.559.10 1063 1414 6.1E-148 T 13-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 COP00_02000 6f77ff94730a531fd4bca340810d4dd5 3599 Gene3D G3DSA:3.30.559.30 1224 1469 6.1E-148 T 13-10-2018 COP00_02000 6f77ff94730a531fd4bca340810d4dd5 3599 SUPERFAMILY SSF56801 2494 3050 5.49E-152 T 13-10-2018 COP00_02000 6f77ff94730a531fd4bca340810d4dd5 3599 SUPERFAMILY SSF52777 2088 2272 2.56E-43 T 13-10-2018 COP00_02000 6f77ff94730a531fd4bca340810d4dd5 3599 Gene3D G3DSA:3.30.300.30 2923 3025 5.3E-26 T 13-10-2018 COP00_02000 6f77ff94730a531fd4bca340810d4dd5 3599 ProSitePatterns PS00455 Putative AMP-binding domain signature. 1646 1657 - T 13-10-2018 IPR020845 AMP-binding, conserved site COP00_02000 6f77ff94730a531fd4bca340810d4dd5 3599 SUPERFAMILY SSF47336 969 1042 3.01E-18 T 13-10-2018 IPR036736 ACP-like superfamily COP00_02000 6f77ff94730a531fd4bca340810d4dd5 3599 SUPERFAMILY SSF47336 3030 3101 3.14E-19 T 13-10-2018 IPR036736 ACP-like superfamily COP00_02000 6f77ff94730a531fd4bca340810d4dd5 3599 SMART SM00823 Phosphopantetheine attachment site 3037 3104 5.0E-4 T 13-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 COP00_02000 6f77ff94730a531fd4bca340810d4dd5 3599 SMART SM00823 Phosphopantetheine attachment site 2009 2078 0.0097 T 13-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 COP00_02000 6f77ff94730a531fd4bca340810d4dd5 3599 SMART SM00823 Phosphopantetheine attachment site 977 1046 0.001 T 13-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 COP00_02000 6f77ff94730a531fd4bca340810d4dd5 3599 Gene3D G3DSA:3.30.559.10 13 383 1.4E-122 T 13-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 COP00_02000 6f77ff94730a531fd4bca340810d4dd5 3599 Pfam PF00501 AMP-binding enzyme 471 870 3.7E-95 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 COP00_02000 6f77ff94730a531fd4bca340810d4dd5 3599 Pfam PF00501 AMP-binding enzyme 2537 2929 3.1E-98 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 COP00_02000 6f77ff94730a531fd4bca340810d4dd5 3599 Pfam PF00501 AMP-binding enzyme 1506 1906 7.6E-100 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 COP00_02000 6f77ff94730a531fd4bca340810d4dd5 3599 Gene3D G3DSA:3.30.559.10 2095 2446 7.5E-155 T 13-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 COP00_02000 6f77ff94730a531fd4bca340810d4dd5 3599 ProSitePatterns PS00455 Putative AMP-binding domain signature. 2676 2687 - T 13-10-2018 IPR020845 AMP-binding, conserved site COP00_02000 6f77ff94730a531fd4bca340810d4dd5 3599 SUPERFAMILY SSF52777 192 439 1.22E-43 T 13-10-2018 COP00_02000 6f77ff94730a531fd4bca340810d4dd5 3599 SUPERFAMILY SSF52777 1065 1220 3.45E-41 T 13-10-2018 COP00_02000 6f77ff94730a531fd4bca340810d4dd5 3599 ProSitePatterns PS00012 Phosphopantetheine attachment site. 3061 3076 - T 13-10-2018 IPR006162 Phosphopantetheine attachment site COP00_02000 6f77ff94730a531fd4bca340810d4dd5 3599 SUPERFAMILY SSF47336 2001 2074 7.92E-18 T 13-10-2018 IPR036736 ACP-like superfamily COP00_02000 6f77ff94730a531fd4bca340810d4dd5 3599 Gene3D G3DSA:3.30.559.30 3288 3574 1.3E-61 T 13-10-2018 COP00_02000 6f77ff94730a531fd4bca340810d4dd5 3599 Pfam PF00550 Phosphopantetheine attachment site 979 1041 7.2E-14 T 13-10-2018 IPR009081 Phosphopantetheine binding ACP domain COP00_02000 6f77ff94730a531fd4bca340810d4dd5 3599 Pfam PF00550 Phosphopantetheine attachment site 2011 2074 4.4E-11 T 13-10-2018 IPR009081 Phosphopantetheine binding ACP domain COP00_02000 6f77ff94730a531fd4bca340810d4dd5 3599 Pfam PF00550 Phosphopantetheine attachment site 3039 3100 1.7E-13 T 13-10-2018 IPR009081 Phosphopantetheine binding ACP domain COP00_02000 6f77ff94730a531fd4bca340810d4dd5 3599 Gene3D G3DSA:3.40.50.12780 1496 1898 4.8E-133 T 13-10-2018 COP00_02000 6f77ff94730a531fd4bca340810d4dd5 3599 Gene3D G3DSA:3.40.50.12780 2524 2922 2.9E-131 T 13-10-2018 COP00_02000 6f77ff94730a531fd4bca340810d4dd5 3599 Gene3D G3DSA:3.40.50.12780 456 864 1.7E-122 T 13-10-2018 COP00_02000 6f77ff94730a531fd4bca340810d4dd5 3599 SUPERFAMILY SSF52777 3306 3568 3.0E-29 T 13-10-2018 COP00_02000 6f77ff94730a531fd4bca340810d4dd5 3599 SUPERFAMILY SSF52777 2258 2500 4.78E-69 T 13-10-2018 COP00_02000 6f77ff94730a531fd4bca340810d4dd5 3599 ProSitePatterns PS00455 Putative AMP-binding domain signature. 612 623 - T 13-10-2018 IPR020845 AMP-binding, conserved site COP00_02000 6f77ff94730a531fd4bca340810d4dd5 3599 SUPERFAMILY SSF52777 13 190 4.56E-41 T 13-10-2018 COP00_02000 6f77ff94730a531fd4bca340810d4dd5 3599 SUPERFAMILY SSF52777 3120 3297 1.78E-34 T 13-10-2018 COP00_02000 6f77ff94730a531fd4bca340810d4dd5 3599 Gene3D G3DSA:3.30.559.30 192 448 1.4E-122 T 13-10-2018 COP00_02000 6f77ff94730a531fd4bca340810d4dd5 3599 SUPERFAMILY SSF52777 1228 1473 2.67E-64 T 13-10-2018 COP00_02000 6f77ff94730a531fd4bca340810d4dd5 3599 Gene3D G3DSA:3.30.559.10 3105 3287 5.8E-53 T 13-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 COP00_02000 6f77ff94730a531fd4bca340810d4dd5 3599 Gene3D G3DSA:3.30.559.30 2256 2501 7.5E-155 T 13-10-2018 COP00_02000 6f77ff94730a531fd4bca340810d4dd5 3599 SUPERFAMILY SSF56801 1464 2021 4.45E-155 T 13-10-2018 COP00_02000 6f77ff94730a531fd4bca340810d4dd5 3599 Pfam PF13193 AMP-binding enzyme C-terminal domain 1914 1983 7.0E-7 T 13-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain COP00_02000 6f77ff94730a531fd4bca340810d4dd5 3599 Pfam PF13193 AMP-binding enzyme C-terminal domain 878 951 1.9E-8 T 13-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain COP00_02000 6f77ff94730a531fd4bca340810d4dd5 3599 Pfam PF13193 AMP-binding enzyme C-terminal domain 2937 3010 1.2E-7 T 13-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain COP00_02000 6f77ff94730a531fd4bca340810d4dd5 3599 TIGRFAM TIGR01720 NRPS-para261: non-ribosomal peptide synthase domain TIGR01720 3435 3590 8.2E-43 T 13-10-2018 IPR010060 Non-ribosomal peptide synthase COP00_02000 6f77ff94730a531fd4bca340810d4dd5 3599 PRINTS PR00154 AMP-binding signature 2671 2682 6.0E-5 T 13-10-2018 IPR020459 AMP-binding COP00_02000 6f77ff94730a531fd4bca340810d4dd5 3599 PRINTS PR00154 AMP-binding signature 2683 2691 6.0E-5 T 13-10-2018 IPR020459 AMP-binding COP00_02000 6f77ff94730a531fd4bca340810d4dd5 3599 SUPERFAMILY SSF56801 430 989 1.01E-141 T 13-10-2018 COP00_02000 6f77ff94730a531fd4bca340810d4dd5 3599 Gene3D G3DSA:3.30.300.30 865 965 3.6E-31 T 13-10-2018 COP00_02000 6f77ff94730a531fd4bca340810d4dd5 3599 Pfam PF00668 Condensation domain 1060 1485 1.6E-133 T 13-10-2018 IPR001242 Condensation domain COP00_02000 6f77ff94730a531fd4bca340810d4dd5 3599 Pfam PF00668 Condensation domain 8 452 1.9E-116 T 13-10-2018 IPR001242 Condensation domain COP00_02000 6f77ff94730a531fd4bca340810d4dd5 3599 Pfam PF00668 Condensation domain 2090 2516 1.4E-141 T 13-10-2018 IPR001242 Condensation domain COP00_02000 6f77ff94730a531fd4bca340810d4dd5 3599 Pfam PF00668 Condensation domain 3114 3585 3.8E-98 T 13-10-2018 IPR001242 Condensation domain COP00_02000 6f77ff94730a531fd4bca340810d4dd5 3599 Gene3D G3DSA:1.10.1200.10 966 1049 7.6E-25 T 13-10-2018 IPR036736 ACP-like superfamily COP00_02000 6f77ff94730a531fd4bca340810d4dd5 3599 Gene3D G3DSA:1.10.1200.10 3026 3104 5.6E-24 T 13-10-2018 IPR036736 ACP-like superfamily COP00_02000 6f77ff94730a531fd4bca340810d4dd5 3599 Gene3D G3DSA:1.10.1200.10 1998 2079 3.2E-24 T 13-10-2018 IPR036736 ACP-like superfamily COP00_10955 4ca77584f55546064cc953e263eab568 406 Pfam PF00266 Aminotransferase class-V 23 391 1.7E-163 T 13-10-2018 IPR000192 Aminotransferase class V domain COP00_10955 4ca77584f55546064cc953e263eab568 406 PIRSF PIRSF005572 20 405 2.2E-50 T 13-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 COP00_10955 4ca77584f55546064cc953e263eab568 406 SUPERFAMILY SSF53383 2 398 2.93E-136 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase COP00_10955 4ca77584f55546064cc953e263eab568 406 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 4 402 6.7E-191 T 13-10-2018 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 COP00_10955 4ca77584f55546064cc953e263eab568 406 Gene3D G3DSA:3.90.1150.10 6 395 5.5E-183 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 COP00_10955 4ca77584f55546064cc953e263eab568 406 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 215 234 - T 13-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site COP00_10955 4ca77584f55546064cc953e263eab568 406 Gene3D G3DSA:3.40.640.10 34 294 5.5E-183 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 COP00_10765 4645bac629cca7c96cf6b3f71e02f464 352 Gene3D G3DSA:3.40.50.1100 9 321 8.5E-126 T 13-10-2018 COP00_10765 4645bac629cca7c96cf6b3f71e02f464 352 SUPERFAMILY SSF53686 4 347 1.28E-110 T 13-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme COP00_10765 4645bac629cca7c96cf6b3f71e02f464 352 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 23 315 1.6E-77 T 13-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme COP00_10765 4645bac629cca7c96cf6b3f71e02f464 352 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 50 63 - T 13-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 COP00_10765 4645bac629cca7c96cf6b3f71e02f464 352 TIGRFAM TIGR00260 thrC: threonine synthase 6 322 1.0E-111 T 13-10-2018 IPR004450 Threonine synthase-like COP00_10765 4645bac629cca7c96cf6b3f71e02f464 352 PIRSF PIRSF038945 1 347 1.1E-162 T 13-10-2018 IPR026260 Threonine synthase, bacterial/archaeal GO:0004795|GO:0009088 KEGG: 00260+4.2.3.1|KEGG: 00750+4.2.3.1 COP00_10765 4645bac629cca7c96cf6b3f71e02f464 352 Gene3D G3DSA:3.40.50.1100 58 154 8.5E-126 T 13-10-2018 COP00_17520 d90e58eeec37947dfd2003202d4a9512 218 SMART SM00895 81 206 2.0E-17 T 13-10-2018 IPR011711 GntR, C-terminal COP00_17520 d90e58eeec37947dfd2003202d4a9512 218 SUPERFAMILY SSF46785 7 72 2.84E-16 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_17520 d90e58eeec37947dfd2003202d4a9512 218 Pfam PF07729 FCD domain 81 205 4.9E-23 T 13-10-2018 IPR011711 GntR, C-terminal COP00_17520 d90e58eeec37947dfd2003202d4a9512 218 SUPERFAMILY SSF48008 77 213 6.28E-25 T 13-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal COP00_17520 d90e58eeec37947dfd2003202d4a9512 218 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 33 47 1.3E-5 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 COP00_17520 d90e58eeec37947dfd2003202d4a9512 218 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 47 63 1.3E-5 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 COP00_17520 d90e58eeec37947dfd2003202d4a9512 218 SMART SM00345 15 71 9.9E-10 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 COP00_17520 d90e58eeec37947dfd2003202d4a9512 218 Gene3D G3DSA:1.20.120.530 75 218 3.7E-25 T 13-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal COP00_17520 d90e58eeec37947dfd2003202d4a9512 218 Gene3D G3DSA:1.10.10.10 9 72 3.7E-19 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_17520 d90e58eeec37947dfd2003202d4a9512 218 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 44 63 1.8E-6 T 13-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 COP00_17520 d90e58eeec37947dfd2003202d4a9512 218 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 33 44 1.8E-6 T 13-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 COP00_17520 d90e58eeec37947dfd2003202d4a9512 218 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 69 7.5E-16 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 COP00_21765 7bc0f6c11e11258fba095a43ae7c2e09 274 SUPERFAMILY SSF54001 155 274 3.38E-34 T 13-10-2018 IPR038765 Papain-like cysteine peptidase superfamily COP00_21765 7bc0f6c11e11258fba095a43ae7c2e09 274 SUPERFAMILY SSF54106 26 70 3.01E-10 T 13-10-2018 COP00_21765 7bc0f6c11e11258fba095a43ae7c2e09 274 Gene3D G3DSA:3.90.1720.10 158 274 7.1E-33 T 13-10-2018 COP00_21765 7bc0f6c11e11258fba095a43ae7c2e09 274 Pfam PF00877 NlpC/P60 family 172 272 1.0E-27 T 13-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain COP00_21765 7bc0f6c11e11258fba095a43ae7c2e09 274 Gene3D G3DSA:3.10.350.10 83 135 2.9E-18 T 13-10-2018 IPR036779 LysM domain superfamily COP00_21765 7bc0f6c11e11258fba095a43ae7c2e09 274 Gene3D G3DSA:3.10.350.10 20 82 1.1E-16 T 13-10-2018 IPR036779 LysM domain superfamily COP00_21765 7bc0f6c11e11258fba095a43ae7c2e09 274 SMART SM00257 27 70 2.2E-13 T 13-10-2018 IPR018392 LysM domain COP00_21765 7bc0f6c11e11258fba095a43ae7c2e09 274 SMART SM00257 85 128 7.2E-18 T 13-10-2018 IPR018392 LysM domain COP00_21765 7bc0f6c11e11258fba095a43ae7c2e09 274 SUPERFAMILY SSF54106 85 127 1.31E-11 T 13-10-2018 COP00_21765 7bc0f6c11e11258fba095a43ae7c2e09 274 Pfam PF01476 LysM domain 86 127 8.2E-14 T 13-10-2018 IPR018392 LysM domain COP00_21765 7bc0f6c11e11258fba095a43ae7c2e09 274 Pfam PF01476 LysM domain 29 69 9.7E-13 T 13-10-2018 IPR018392 LysM domain COP00_16815 9cd20a6b557993e630675753128ec11e 131 ProSitePatterns PS00054 Ribosomal protein S11 signature. 99 121 - T 13-10-2018 IPR018102 Ribosomal S11, conserved site COP00_16815 9cd20a6b557993e630675753128ec11e 131 SUPERFAMILY SSF53137 16 131 1.31E-49 T 13-10-2018 COP00_16815 9cd20a6b557993e630675753128ec11e 131 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 5 131 34.444 T 13-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 COP00_16815 9cd20a6b557993e630675753128ec11e 131 PIRSF PIRSF002131 1 131 2.1E-53 T 13-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 COP00_16815 9cd20a6b557993e630675753128ec11e 131 Pfam PF00411 Ribosomal protein S11 21 130 3.3E-52 T 13-10-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 COP00_16815 9cd20a6b557993e630675753128ec11e 131 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 12 128 7.2E-59 T 13-10-2018 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 COP00_16815 9cd20a6b557993e630675753128ec11e 131 Gene3D G3DSA:3.30.420.80 3 131 1.3E-54 T 13-10-2018 IPR036967 Ribosomal protein S11 superfamily GO:0003735|GO:0005840|GO:0006412 COP00_17435 794cf139858a721a8187a38370c7900d 1428 SUPERFAMILY SSF49401 975 1076 3.73E-8 T 13-10-2018 IPR008966 Adhesion domain superfamily COP00_17435 794cf139858a721a8187a38370c7900d 1428 SUPERFAMILY SSF49401 1252 1353 8.45E-8 T 13-10-2018 IPR008966 Adhesion domain superfamily COP00_17435 794cf139858a721a8187a38370c7900d 1428 SUPERFAMILY SSF49401 258 380 3.98E-10 T 13-10-2018 IPR008966 Adhesion domain superfamily COP00_17435 794cf139858a721a8187a38370c7900d 1428 Gene3D G3DSA:2.60.40.740 242 384 5.0E-7 T 13-10-2018 COP00_17435 794cf139858a721a8187a38370c7900d 1428 Pfam PF00746 LPXTG cell wall anchor motif 1388 1426 1.3E-4 T 13-10-2018 IPR019948 Gram-positive LPXTG cell wall anchor COP00_17435 794cf139858a721a8187a38370c7900d 1428 SUPERFAMILY SSF49401 701 799 1.91E-7 T 13-10-2018 IPR008966 Adhesion domain superfamily COP00_17435 794cf139858a721a8187a38370c7900d 1428 TIGRFAM TIGR01167 LPXTG_anchor: LPXTG cell wall anchor domain 1394 1426 7.9E-6 T 13-10-2018 COP00_17435 794cf139858a721a8187a38370c7900d 1428 SUPERFAMILY SSF49401 571 673 2.39E-11 T 13-10-2018 IPR008966 Adhesion domain superfamily COP00_17435 794cf139858a721a8187a38370c7900d 1428 Gene3D G3DSA:2.60.40.740 398 532 2.7E-12 T 13-10-2018 COP00_17435 794cf139858a721a8187a38370c7900d 1428 Gene3D G3DSA:2.60.40.740 1098 1231 5.2E-12 T 13-10-2018 COP00_17435 794cf139858a721a8187a38370c7900d 1428 Gene3D G3DSA:2.60.40.740 824 954 3.6E-11 T 13-10-2018 COP00_17435 794cf139858a721a8187a38370c7900d 1428 Gene3D G3DSA:2.60.40.740 543 677 2.2E-11 T 13-10-2018 COP00_17435 794cf139858a721a8187a38370c7900d 1428 SUPERFAMILY SSF49401 416 521 5.47E-11 T 13-10-2018 IPR008966 Adhesion domain superfamily COP00_17435 794cf139858a721a8187a38370c7900d 1428 Pfam PF01345 Domain of unknown function DUF11 1107 1208 2.9E-9 T 13-10-2018 IPR001434 Domain of unknown function DUF11 COP00_17435 794cf139858a721a8187a38370c7900d 1428 Pfam PF01345 Domain of unknown function DUF11 832 880 2.0E-6 T 13-10-2018 IPR001434 Domain of unknown function DUF11 COP00_17435 794cf139858a721a8187a38370c7900d 1428 Pfam PF01345 Domain of unknown function DUF11 1247 1341 4.0E-10 T 13-10-2018 IPR001434 Domain of unknown function DUF11 COP00_17435 794cf139858a721a8187a38370c7900d 1428 Pfam PF01345 Domain of unknown function DUF11 409 509 1.3E-7 T 13-10-2018 IPR001434 Domain of unknown function DUF11 COP00_17435 794cf139858a721a8187a38370c7900d 1428 Pfam PF01345 Domain of unknown function DUF11 693 772 1.0E-7 T 13-10-2018 IPR001434 Domain of unknown function DUF11 COP00_17435 794cf139858a721a8187a38370c7900d 1428 Pfam PF01345 Domain of unknown function DUF11 970 1064 2.9E-8 T 13-10-2018 IPR001434 Domain of unknown function DUF11 COP00_17435 794cf139858a721a8187a38370c7900d 1428 Pfam PF01345 Domain of unknown function DUF11 246 314 1.8E-9 T 13-10-2018 IPR001434 Domain of unknown function DUF11 COP00_17435 794cf139858a721a8187a38370c7900d 1428 SUPERFAMILY SSF49401 846 943 6.46E-10 T 13-10-2018 IPR008966 Adhesion domain superfamily COP00_17435 794cf139858a721a8187a38370c7900d 1428 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 1246 1295 1.2E-9 T 13-10-2018 IPR001434 Domain of unknown function DUF11 COP00_17435 794cf139858a721a8187a38370c7900d 1428 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 1106 1156 1.4E-9 T 13-10-2018 IPR001434 Domain of unknown function DUF11 COP00_17435 794cf139858a721a8187a38370c7900d 1428 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 969 1018 3.6E-9 T 13-10-2018 IPR001434 Domain of unknown function DUF11 COP00_17435 794cf139858a721a8187a38370c7900d 1428 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 692 741 4.9E-11 T 13-10-2018 IPR001434 Domain of unknown function DUF11 COP00_17435 794cf139858a721a8187a38370c7900d 1428 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 552 602 1.4E-9 T 13-10-2018 IPR001434 Domain of unknown function DUF11 COP00_17435 794cf139858a721a8187a38370c7900d 1428 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 407 457 8.7E-10 T 13-10-2018 IPR001434 Domain of unknown function DUF11 COP00_17435 794cf139858a721a8187a38370c7900d 1428 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 830 879 9.3E-11 T 13-10-2018 IPR001434 Domain of unknown function DUF11 COP00_17435 794cf139858a721a8187a38370c7900d 1428 TIGRFAM TIGR01451 B_ant_repeat: conserved repeat domain 254 295 1.3E-10 T 13-10-2018 IPR001434 Domain of unknown function DUF11 COP00_17435 794cf139858a721a8187a38370c7900d 1428 TIGRFAM TIGR04226 RrgB_K2N_iso_D2: fimbrial isopeptide formation D2 domain 826 934 3.8E-9 T 13-10-2018 IPR026466 Fimbrial isopeptide formation D2 domain COP00_17435 794cf139858a721a8187a38370c7900d 1428 TIGRFAM TIGR04226 RrgB_K2N_iso_D2: fimbrial isopeptide formation D2 domain 1105 1211 4.9E-10 T 13-10-2018 IPR026466 Fimbrial isopeptide formation D2 domain COP00_17435 794cf139858a721a8187a38370c7900d 1428 TIGRFAM TIGR04226 RrgB_K2N_iso_D2: fimbrial isopeptide formation D2 domain 399 513 2.4E-10 T 13-10-2018 IPR026466 Fimbrial isopeptide formation D2 domain COP00_17435 794cf139858a721a8187a38370c7900d 1428 TIGRFAM TIGR04226 RrgB_K2N_iso_D2: fimbrial isopeptide formation D2 domain 685 790 2.3E-11 T 13-10-2018 IPR026466 Fimbrial isopeptide formation D2 domain COP00_17435 794cf139858a721a8187a38370c7900d 1428 TIGRFAM TIGR04226 RrgB_K2N_iso_D2: fimbrial isopeptide formation D2 domain 1240 1344 1.9E-11 T 13-10-2018 IPR026466 Fimbrial isopeptide formation D2 domain COP00_17435 794cf139858a721a8187a38370c7900d 1428 TIGRFAM TIGR04226 RrgB_K2N_iso_D2: fimbrial isopeptide formation D2 domain 961 1067 9.2E-12 T 13-10-2018 IPR026466 Fimbrial isopeptide formation D2 domain COP00_17435 794cf139858a721a8187a38370c7900d 1428 TIGRFAM TIGR04226 RrgB_K2N_iso_D2: fimbrial isopeptide formation D2 domain 547 657 2.3E-9 T 13-10-2018 IPR026466 Fimbrial isopeptide formation D2 domain COP00_17435 794cf139858a721a8187a38370c7900d 1428 Gene3D G3DSA:2.60.40.740 1233 1403 4.8E-11 T 13-10-2018 COP00_17435 794cf139858a721a8187a38370c7900d 1428 Gene3D G3DSA:2.60.40.740 679 823 3.5E-12 T 13-10-2018 COP00_17435 794cf139858a721a8187a38370c7900d 1428 Gene3D G3DSA:2.60.40.740 956 1097 2.0E-11 T 13-10-2018 COP00_17435 794cf139858a721a8187a38370c7900d 1428 Gene3D G3DSA:2.60.120.260 63 238 3.8E-6 T 13-10-2018 IPR008979 Galactose-binding-like domain superfamily COP00_17435 794cf139858a721a8187a38370c7900d 1428 SUPERFAMILY SSF49401 1119 1221 7.7E-11 T 13-10-2018 IPR008966 Adhesion domain superfamily COP00_20260 49f140f4c33b7e90cd2c3e5b06232f68 579 Pfam PF01979 Amidohydrolase family 77 359 5.5E-20 T 13-10-2018 IPR006680 Amidohydrolase-related GO:0016787 COP00_20260 49f140f4c33b7e90cd2c3e5b06232f68 579 Pfam PF13382 Adenine deaminase C-terminal domain 415 570 3.6E-34 T 13-10-2018 IPR026912 Adenine deaminase C-terminal domain KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 COP00_20260 49f140f4c33b7e90cd2c3e5b06232f68 579 SUPERFAMILY SSF51556 81 327 1.06E-10 T 13-10-2018 IPR032466 Metal-dependent hydrolase COP00_20260 49f140f4c33b7e90cd2c3e5b06232f68 579 Gene3D G3DSA:2.30.40.10 27 360 2.5E-80 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 COP00_20260 49f140f4c33b7e90cd2c3e5b06232f68 579 SUPERFAMILY SSF51338 19 363 6.79E-14 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 COP00_20260 49f140f4c33b7e90cd2c3e5b06232f68 579 Gene3D G3DSA:3.20.20.140 81 324 2.5E-80 T 13-10-2018 COP00_15500 35dd4603c51947da6287705c69b23471 187 Gene3D G3DSA:3.40.30.10 1 186 1.4E-57 T 13-10-2018 COP00_15500 35dd4603c51947da6287705c69b23471 187 SUPERFAMILY SSF52833 1 187 1.67E-53 T 13-10-2018 IPR036249 Thioredoxin-like superfamily COP00_15500 35dd4603c51947da6287705c69b23471 187 TIGRFAM TIGR03137 AhpC: peroxiredoxin 1 187 3.5E-102 T 13-10-2018 IPR017559 Alkyl hydroperoxide reductase subunit C GO:0006979|GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 COP00_15500 35dd4603c51947da6287705c69b23471 187 Pfam PF00578 AhpC/TSA family 4 133 2.9E-32 T 13-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 COP00_15500 35dd4603c51947da6287705c69b23471 187 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 156 182 3.3E-5 T 13-10-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 COP00_15500 35dd4603c51947da6287705c69b23471 187 PIRSF PIRSF000239 1 187 9.1E-49 T 13-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 COP00_15160 5b4f75eda65f2cca51372f39f7c74d6a 329 Gene3D G3DSA:3.60.60.10 2 328 5.9E-130 T 13-10-2018 COP00_15160 5b4f75eda65f2cca51372f39f7c74d6a 329 Pfam PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family 2 315 3.0E-121 T 13-10-2018 IPR029132 Choloylglycine hydrolase/NAAA C-terminal COP00_15160 5b4f75eda65f2cca51372f39f7c74d6a 329 SUPERFAMILY SSF56235 2 324 2.24E-112 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal COP00_23010 e572bcf3992fbfbacf67398234b63e17 160 Pfam PF10612 Spore coat protein Z 1 145 1.5E-40 T 13-10-2018 IPR019593 Spore coat protein Z/Y COP00_10965 b710b195082c96b58a6dceaba06c140a 261 Gene3D G3DSA:3.40.50.300 4 252 2.0E-55 T 13-10-2018 COP00_10965 b710b195082c96b58a6dceaba06c140a 261 Pfam PF00005 ABC transporter 21 173 2.2E-21 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 COP00_10965 b710b195082c96b58a6dceaba06c140a 261 TIGRFAM TIGR01978 sufC: FeS assembly ATPase SufC 6 246 1.0E-113 T 13-10-2018 IPR010230 FeS cluster assembly SUF system, ATPase SufC GO:0005524 COP00_10965 b710b195082c96b58a6dceaba06c140a 261 SUPERFAMILY SSF52540 6 233 3.55E-43 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_10965 b710b195082c96b58a6dceaba06c140a 261 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 COP00_10965 b710b195082c96b58a6dceaba06c140a 261 SMART SM00382 30 225 3.9E-6 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_22075 ca39d564d0b306eca23995d242154886 61 Pfam PF14120 YhzD-like protein 1 60 2.7E-27 T 13-10-2018 IPR025544 YhzD-like protein COP00_21350 1cdde6fd0f76c9e05439f6abad334ae7 441 Pfam PF04235 Protein of unknown function (DUF418) 323 424 1.6E-8 T 13-10-2018 IPR007349 Domain of unknown function DUF418 COP00_21350 1cdde6fd0f76c9e05439f6abad334ae7 441 SUPERFAMILY SSF81271 3 61 1.48E-13 T 13-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 COP00_21350 1cdde6fd0f76c9e05439f6abad334ae7 441 Gene3D G3DSA:3.10.20.30 2 62 3.8E-21 T 13-10-2018 IPR012675 Beta-grasp domain superfamily COP00_21350 1cdde6fd0f76c9e05439f6abad334ae7 441 Pfam PF02824 TGS domain 4 61 4.1E-12 T 13-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 COP00_10375 7ee049c6ebe285fd866de4fd5e314b4a 405 PRINTS PR01035 Tetracycline resistance protein signature 344 367 4.4E-6 T 13-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 COP00_10375 7ee049c6ebe285fd866de4fd5e314b4a 405 PRINTS PR01035 Tetracycline resistance protein signature 51 70 4.4E-6 T 13-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 COP00_10375 7ee049c6ebe285fd866de4fd5e314b4a 405 PRINTS PR01035 Tetracycline resistance protein signature 82 106 4.4E-6 T 13-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 COP00_10375 7ee049c6ebe285fd866de4fd5e314b4a 405 PRINTS PR01035 Tetracycline resistance protein signature 139 161 4.4E-6 T 13-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 COP00_10375 7ee049c6ebe285fd866de4fd5e314b4a 405 Pfam PF07690 Major Facilitator Superfamily 15 267 3.7E-31 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 COP00_10375 7ee049c6ebe285fd866de4fd5e314b4a 405 Gene3D G3DSA:1.20.1250.20 214 405 2.6E-29 T 13-10-2018 COP00_10375 7ee049c6ebe285fd866de4fd5e314b4a 405 SUPERFAMILY SSF103473 8 399 1.96E-68 T 13-10-2018 IPR036259 MFS transporter superfamily COP00_10375 7ee049c6ebe285fd866de4fd5e314b4a 405 Gene3D G3DSA:1.20.1250.20 6 201 5.2E-33 T 13-10-2018 COP00_11230 1a52a688c9b381332336aa11a2bda1f3 317 Gene3D G3DSA:3.40.50.1980 184 313 1.4E-41 T 13-10-2018 COP00_11230 1a52a688c9b381332336aa11a2bda1f3 317 Gene3D G3DSA:3.40.50.1980 59 180 1.5E-39 T 13-10-2018 COP00_11230 1a52a688c9b381332336aa11a2bda1f3 317 Pfam PF01497 Periplasmic binding protein 62 290 3.8E-40 T 13-10-2018 IPR002491 ABC transporter periplasmic binding domain COP00_11230 1a52a688c9b381332336aa11a2bda1f3 317 SUPERFAMILY SSF53807 46 316 9.81E-67 T 13-10-2018 COP00_05190 e6c7b9c57ad5368a70df1e18a8cbeb9c 422 SUPERFAMILY SSF53686 13 366 5.24E-99 T 13-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme COP00_05190 e6c7b9c57ad5368a70df1e18a8cbeb9c 422 Gene3D G3DSA:3.40.50.1100 59 158 5.7E-117 T 13-10-2018 COP00_05190 e6c7b9c57ad5368a70df1e18a8cbeb9c 422 TIGRFAM TIGR02079 THD1: threonine dehydratase 14 422 2.2E-196 T 13-10-2018 IPR011820 L-threonine dehydratase biosynthetic IlvA GO:0004794 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 COP00_05190 e6c7b9c57ad5368a70df1e18a8cbeb9c 422 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 25 316 2.6E-73 T 13-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme COP00_05190 e6c7b9c57ad5368a70df1e18a8cbeb9c 422 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 330 420 1.0E-29 T 13-10-2018 IPR001721 Threonine dehydratase, ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 COP00_05190 e6c7b9c57ad5368a70df1e18a8cbeb9c 422 Gene3D G3DSA:3.40.50.1100 23 327 5.7E-117 T 13-10-2018 COP00_05190 e6c7b9c57ad5368a70df1e18a8cbeb9c 422 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 51 64 - T 13-10-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 COP00_10080 ca35fee50bb9d03468ab7adc4fd69e4f 190 TIGRFAM TIGR01076 sortase_fam: sortase 59 183 3.0E-31 T 13-10-2018 IPR005754 Sortase family COP00_10080 ca35fee50bb9d03468ab7adc4fd69e4f 190 SUPERFAMILY SSF63817 48 186 1.7E-37 T 13-10-2018 IPR023365 Sortase domain superfamily COP00_10080 ca35fee50bb9d03468ab7adc4fd69e4f 190 Gene3D G3DSA:2.40.260.10 12 189 1.7E-44 T 13-10-2018 IPR023365 Sortase domain superfamily COP00_10080 ca35fee50bb9d03468ab7adc4fd69e4f 190 Pfam PF04203 Sortase family 62 181 1.8E-27 T 13-10-2018 IPR005754 Sortase family COP00_21940 f24164879d45f77f040479919118badd 326 Gene3D G3DSA:2.70.98.10 1 324 6.3E-101 T 13-10-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 COP00_21940 f24164879d45f77f040479919118badd 326 Pfam PF01263 Aldose 1-epimerase 16 315 6.2E-41 T 13-10-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 COP00_21940 f24164879d45f77f040479919118badd 326 SUPERFAMILY SSF74650 17 322 1.32E-50 T 13-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 COP00_19255 1e0e475bd792ecbf3c1409fa88f5b3d3 186 SMART SM01266 5 59 2.1E-23 T 13-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 COP00_19255 1e0e475bd792ecbf3c1409fa88f5b3d3 186 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 130 165 1.1E-11 T 13-10-2018 IPR001451 Hexapeptide repeat COP00_19255 1e0e475bd792ecbf3c1409fa88f5b3d3 186 Gene3D G3DSA:2.160.10.10 1 186 1.7E-73 T 13-10-2018 COP00_19255 1e0e475bd792ecbf3c1409fa88f5b3d3 186 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 139 167 - T 13-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 COP00_19255 1e0e475bd792ecbf3c1409fa88f5b3d3 186 SUPERFAMILY SSF51161 1 184 6.52E-55 T 13-10-2018 IPR011004 Trimeric LpxA-like superfamily COP00_19255 1e0e475bd792ecbf3c1409fa88f5b3d3 186 Pfam PF12464 Maltose acetyltransferase 7 58 7.2E-18 T 13-10-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 COP00_01965 df2c2b84d8ea31a46de5da283dd6f684 393 Pfam PF01168 Alanine racemase, N-terminal domain 12 235 1.2E-66 T 13-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 COP00_01965 df2c2b84d8ea31a46de5da283dd6f684 393 Gene3D G3DSA:2.40.37.10 240 393 2.1E-56 T 13-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 COP00_01965 df2c2b84d8ea31a46de5da283dd6f684 393 TIGRFAM TIGR00492 alr: alanine racemase 6 378 4.4E-149 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 COP00_01965 df2c2b84d8ea31a46de5da283dd6f684 393 SUPERFAMILY SSF50621 245 385 2.16E-45 T 13-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 COP00_01965 df2c2b84d8ea31a46de5da283dd6f684 393 Gene3D G3DSA:3.20.20.10 14 230 3.3E-73 T 13-10-2018 IPR029066 PLP-binding barrel COP00_01965 df2c2b84d8ea31a46de5da283dd6f684 393 SUPERFAMILY SSF51419 12 251 1.29E-64 T 13-10-2018 IPR029066 PLP-binding barrel COP00_01965 df2c2b84d8ea31a46de5da283dd6f684 393 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 36 46 - T 13-10-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 COP00_01965 df2c2b84d8ea31a46de5da283dd6f684 393 Hamap MF_01201 Alanine racemase. 5 378 34.296 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 COP00_01965 df2c2b84d8ea31a46de5da283dd6f684 393 SMART SM01005 250 378 2.6E-57 T 13-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 COP00_01965 df2c2b84d8ea31a46de5da283dd6f684 393 Pfam PF00842 Alanine racemase, C-terminal domain 250 376 3.1E-39 T 13-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 COP00_01965 df2c2b84d8ea31a46de5da283dd6f684 393 PRINTS PR00992 Alanine racemase signature 208 235 8.6E-67 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 COP00_01965 df2c2b84d8ea31a46de5da283dd6f684 393 PRINTS PR00992 Alanine racemase signature 130 142 8.6E-67 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 COP00_01965 df2c2b84d8ea31a46de5da283dd6f684 393 PRINTS PR00992 Alanine racemase signature 284 299 8.6E-67 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 COP00_01965 df2c2b84d8ea31a46de5da283dd6f684 393 PRINTS PR00992 Alanine racemase signature 305 322 8.6E-67 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 COP00_01965 df2c2b84d8ea31a46de5da283dd6f684 393 PRINTS PR00992 Alanine racemase signature 31 47 8.6E-67 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 COP00_01965 df2c2b84d8ea31a46de5da283dd6f684 393 PRINTS PR00992 Alanine racemase signature 267 282 8.6E-67 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 COP00_01965 df2c2b84d8ea31a46de5da283dd6f684 393 PRINTS PR00992 Alanine racemase signature 360 373 8.6E-67 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 COP00_01965 df2c2b84d8ea31a46de5da283dd6f684 393 PRINTS PR00992 Alanine racemase signature 67 85 8.6E-67 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 COP00_01965 df2c2b84d8ea31a46de5da283dd6f684 393 PRINTS PR00992 Alanine racemase signature 165 176 8.6E-67 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 COP00_14010 2f6be6da2ee2a184beb8b3f9a1f80bc7 376 SUPERFAMILY SSF47203 226 376 5.32E-48 T 13-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 COP00_14010 2f6be6da2ee2a184beb8b3f9a1f80bc7 376 Gene3D G3DSA:1.20.140.10 234 376 3.1E-45 T 13-10-2018 COP00_14010 2f6be6da2ee2a184beb8b3f9a1f80bc7 376 SUPERFAMILY SSF56645 2 241 1.57E-78 T 13-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 COP00_14010 2f6be6da2ee2a184beb8b3f9a1f80bc7 376 Gene3D G3DSA:2.40.110.10 120 233 8.3E-46 T 13-10-2018 COP00_14010 2f6be6da2ee2a184beb8b3f9a1f80bc7 376 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 123 135 - T 13-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 COP00_14010 2f6be6da2ee2a184beb8b3f9a1f80bc7 376 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 229 375 6.7E-41 T 13-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 COP00_14010 2f6be6da2ee2a184beb8b3f9a1f80bc7 376 Gene3D G3DSA:1.10.540.10 1 118 1.3E-34 T 13-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 COP00_14010 2f6be6da2ee2a184beb8b3f9a1f80bc7 376 PIRSF PIRSF016578 133 366 1.4E-13 T 13-10-2018 COP00_14010 2f6be6da2ee2a184beb8b3f9a1f80bc7 376 PIRSF PIRSF016578 6 96 0.18 T 13-10-2018 COP00_14010 2f6be6da2ee2a184beb8b3f9a1f80bc7 376 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 121 215 6.1E-28 T 13-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 COP00_14010 2f6be6da2ee2a184beb8b3f9a1f80bc7 376 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 116 5.5E-30 T 13-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 COP00_22975 6472bf47c7bfc41f2ddfa8472dd46fcb 67 Gene3D G3DSA:3.10.20.30 2 67 6.7E-21 T 13-10-2018 IPR012675 Beta-grasp domain superfamily COP00_22975 6472bf47c7bfc41f2ddfa8472dd46fcb 67 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 3 67 5.4E-21 T 13-10-2018 IPR010035 ThiS, thiamine-biosynthesis COP00_22975 6472bf47c7bfc41f2ddfa8472dd46fcb 67 SUPERFAMILY SSF54285 2 66 7.2E-18 T 13-10-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp COP00_22975 6472bf47c7bfc41f2ddfa8472dd46fcb 67 Pfam PF02597 ThiS family 8 67 1.0E-10 T 13-10-2018 IPR003749 Sulfur carrier ThiS/MoaD-like Reactome: R-HSA-947581 COP00_24060 5fe9ad18b7bb3bef72631273b68ab4f2 251 PIRSF PIRSF038953 9 251 4.7E-70 T 13-10-2018 IPR014244 RNA polymerase sigma-I type COP00_24060 5fe9ad18b7bb3bef72631273b68ab4f2 251 Hamap MF_02064 RNA polymerase sigma factor SigI [sigI]. 17 247 29.517 T 13-10-2018 IPR014244 RNA polymerase sigma-I type COP00_24060 5fe9ad18b7bb3bef72631273b68ab4f2 251 TIGRFAM TIGR02895 spore_sigI: RNA polymerase sigma-I factor 22 245 1.6E-87 T 13-10-2018 IPR014244 RNA polymerase sigma-I type COP00_24060 5fe9ad18b7bb3bef72631273b68ab4f2 251 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 33 230 1.5E-15 T 13-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 COP00_24060 5fe9ad18b7bb3bef72631273b68ab4f2 251 Gene3D G3DSA:1.10.1740.10 21 103 4.9E-11 T 13-10-2018 COP00_24060 5fe9ad18b7bb3bef72631273b68ab4f2 251 SUPERFAMILY SSF88946 24 104 8.01E-19 T 13-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 COP00_24060 5fe9ad18b7bb3bef72631273b68ab4f2 251 Pfam PF04542 Sigma-70 region 2 36 106 1.7E-11 T 13-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 COP00_07785 4649e64b657e04fbac9629c26b541923 485 Pfam PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal 6 271 1.4E-83 T 13-10-2018 IPR024674 HpaB/PvcC/4-BUDH N-terminal COP00_07785 4649e64b657e04fbac9629c26b541923 485 SUPERFAMILY SSF56645 3 273 5.04E-67 T 13-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 COP00_07785 4649e64b657e04fbac9629c26b541923 485 PIRSF PIRSF000331 1 484 2.2E-140 T 13-10-2018 IPR004925 HpaB/PvcC/4-BUDH COP00_07785 4649e64b657e04fbac9629c26b541923 485 Gene3D G3DSA:1.10.3140.10 3 146 2.6E-42 T 13-10-2018 COP00_07785 4649e64b657e04fbac9629c26b541923 485 Gene3D G3DSA:1.20.140.10 275 484 4.6E-75 T 13-10-2018 COP00_07785 4649e64b657e04fbac9629c26b541923 485 Gene3D G3DSA:2.40.110.10 147 274 1.2E-40 T 13-10-2018 COP00_07785 4649e64b657e04fbac9629c26b541923 485 TIGRFAM TIGR02309 HpaB-1: 4-hydroxyphenylacetate 3-monooxygenase, oxygenase component 5 478 3.1E-155 T 13-10-2018 IPR012687 4-HPA 3-monooxygenase large component, Deinococcus-type GO:0010124|GO:0016712|GO:0050660 KEGG: 00350+1.14.14.9|MetaCyc: PWY-7431 COP00_07785 4649e64b657e04fbac9629c26b541923 485 Pfam PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal 279 477 5.5E-62 T 13-10-2018 IPR024719 HpaB/PvcC/4-BUDH C-terminal COP00_07785 4649e64b657e04fbac9629c26b541923 485 SUPERFAMILY SSF47203 263 479 1.03E-57 T 13-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 COP00_11940 801fd2328b279526596586bed380b878 380 SUPERFAMILY SSF54631 250 372 1.6E-26 T 13-10-2018 COP00_11940 801fd2328b279526596586bed380b878 380 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 COP00_11940 801fd2328b279526596586bed380b878 380 SMART SM00382 27 221 3.5E-23 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_11940 801fd2328b279526596586bed380b878 380 SUPERFAMILY SSF52540 1 240 1.24E-80 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_11940 801fd2328b279526596586bed380b878 380 SMART SM00116 258 306 9.0E-11 T 13-10-2018 IPR000644 CBS domain COP00_11940 801fd2328b279526596586bed380b878 380 SMART SM00116 318 366 1.5E-8 T 13-10-2018 IPR000644 CBS domain COP00_11940 801fd2328b279526596586bed380b878 380 Gene3D G3DSA:3.10.580.10 247 372 1.5E-38 T 13-10-2018 COP00_11940 801fd2328b279526596586bed380b878 380 Pfam PF00571 CBS domain 251 297 2.6E-10 T 13-10-2018 IPR000644 CBS domain COP00_11940 801fd2328b279526596586bed380b878 380 Pfam PF00571 CBS domain 311 363 1.3E-8 T 13-10-2018 IPR000644 CBS domain COP00_11940 801fd2328b279526596586bed380b878 380 Gene3D G3DSA:3.40.50.300 1 240 8.6E-78 T 13-10-2018 COP00_11940 801fd2328b279526596586bed380b878 380 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 13 371 4.9E-175 T 13-10-2018 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 COP00_11940 801fd2328b279526596586bed380b878 380 Pfam PF00005 ABC transporter 19 163 6.8E-35 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 COP00_08680 b04fdacea1279a550f2191d33e673a62 170 TIGRFAM TIGR00040 yfcE: phosphodiesterase, MJ0936 family 1 149 1.7E-35 T 13-10-2018 IPR000979 Phosphodiesterase MJ0936/Vps29 Reactome: R-HSA-3238698 COP00_08680 b04fdacea1279a550f2191d33e673a62 170 Gene3D G3DSA:3.60.21.10 1 168 2.3E-46 T 13-10-2018 IPR029052 Metallo-dependent phosphatase-like COP00_08680 b04fdacea1279a550f2191d33e673a62 170 SUPERFAMILY SSF56300 1 162 4.91E-44 T 13-10-2018 COP00_08680 b04fdacea1279a550f2191d33e673a62 170 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 1 145 7.1E-29 T 13-10-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 COP00_13360 cb6bb33ff2a158762c0e1bf8ea73faf8 318 TIGRFAM TIGR00350 lytR_cpsA_psr: cell envelope-related function transcriptional attenuator common domain 91 239 1.7E-39 T 13-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain COP00_13360 cb6bb33ff2a158762c0e1bf8ea73faf8 318 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 91 239 8.4E-44 T 13-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain COP00_13360 cb6bb33ff2a158762c0e1bf8ea73faf8 318 Gene3D G3DSA:1.10.260.190 64 309 4.3E-81 T 13-10-2018 COP00_13360 cb6bb33ff2a158762c0e1bf8ea73faf8 318 Gene3D G3DSA:1.10.260.150 160 240 4.3E-81 T 13-10-2018 COP00_20360 cef5865f497112c8373cf5f42fbe7116 458 Gene3D G3DSA:3.40.50.150 85 451 3.0E-131 T 13-10-2018 COP00_20360 cef5865f497112c8373cf5f42fbe7116 458 SUPERFAMILY SSF53335 72 457 5.67E-99 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase COP00_20360 cef5865f497112c8373cf5f42fbe7116 458 Pfam PF01938 TRAM domain 7 63 2.8E-13 T 13-10-2018 IPR002792 TRAM domain COP00_20360 cef5865f497112c8373cf5f42fbe7116 458 Gene3D G3DSA:2.40.50.140 1 64 1.0E-21 T 13-10-2018 COP00_20360 cef5865f497112c8373cf5f42fbe7116 458 Gene3D G3DSA:3.40.1350.30 134 289 3.0E-131 T 13-10-2018 COP00_20360 cef5865f497112c8373cf5f42fbe7116 458 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 440 450 - T 13-10-2018 IPR030391 RNA methyltransferase TrmA, conserved site COP00_20360 cef5865f497112c8373cf5f42fbe7116 458 SUPERFAMILY SSF50249 2 63 3.54E-17 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold COP00_20360 cef5865f497112c8373cf5f42fbe7116 458 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 20 450 1.1E-203 T 13-10-2018 COP00_20360 cef5865f497112c8373cf5f42fbe7116 458 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 279 457 8.8E-21 T 13-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 COP00_20360 cef5865f497112c8373cf5f42fbe7116 458 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 388 419 - T 13-10-2018 IPR030390 RNA methyltransferase TrmA, active site COP00_15650 ac3b42c555d23bb6bcb56f11ba20df31 231 Gene3D G3DSA:3.40.50.300 1 221 4.7E-55 T 13-10-2018 COP00_15650 ac3b42c555d23bb6bcb56f11ba20df31 231 SMART SM00382 27 215 4.4E-17 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_15650 ac3b42c555d23bb6bcb56f11ba20df31 231 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 COP00_15650 ac3b42c555d23bb6bcb56f11ba20df31 231 SUPERFAMILY SSF52540 7 203 7.88E-52 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_15650 ac3b42c555d23bb6bcb56f11ba20df31 231 Pfam PF00005 ABC transporter 22 167 3.7E-27 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 COP00_06465 5f249b0c4b67ab8257d1e78113dfef2e 240 Gene3D G3DSA:3.40.50.300 1 240 6.6E-82 T 13-10-2018 COP00_06465 5f249b0c4b67ab8257d1e78113dfef2e 240 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 COP00_06465 5f249b0c4b67ab8257d1e78113dfef2e 240 Pfam PF00005 ABC transporter 17 165 8.7E-39 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 COP00_06465 5f249b0c4b67ab8257d1e78113dfef2e 240 SMART SM00382 26 213 3.6E-15 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_06465 5f249b0c4b67ab8257d1e78113dfef2e 240 SUPERFAMILY SSF52540 1 235 2.97E-81 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_06465 5f249b0c4b67ab8257d1e78113dfef2e 240 PIRSF PIRSF039085 1 240 9.1E-115 T 13-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 COP00_04440 80066408a5747475dc68529e06b9aff3 566 Gene3D G3DSA:3.40.50.300 266 529 6.2E-64 T 13-10-2018 COP00_04440 80066408a5747475dc68529e06b9aff3 566 Gene3D G3DSA:3.40.50.300 2 228 1.1E-50 T 13-10-2018 COP00_04440 80066408a5747475dc68529e06b9aff3 566 ProSitePatterns PS00211 ABC transporters family signature. 422 436 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 COP00_04440 80066408a5747475dc68529e06b9aff3 566 Pfam PF00005 ABC transporter 322 450 3.7E-23 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 COP00_04440 80066408a5747475dc68529e06b9aff3 566 Pfam PF00005 ABC transporter 20 146 1.4E-20 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 COP00_04440 80066408a5747475dc68529e06b9aff3 566 Pfam PF12848 ABC transporter 185 287 1.1E-9 T 13-10-2018 IPR032781 ABC-transporter extension domain COP00_04440 80066408a5747475dc68529e06b9aff3 566 SMART SM00382 330 503 1.8E-11 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_04440 80066408a5747475dc68529e06b9aff3 566 SMART SM00382 29 191 1.1E-11 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_04440 80066408a5747475dc68529e06b9aff3 566 SUPERFAMILY SSF52540 288 502 1.23E-50 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_04440 80066408a5747475dc68529e06b9aff3 566 SUPERFAMILY SSF52540 4 226 4.22E-42 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_23920 915a15b00c9e67b44b2c915f468e653b 434 Pfam PF00544 Pectate lyase 141 350 1.4E-52 T 13-10-2018 IPR002022 Pectate lyase COP00_23920 915a15b00c9e67b44b2c915f468e653b 434 SMART SM00656 106 356 4.6E-44 T 13-10-2018 IPR002022 Pectate lyase COP00_23920 915a15b00c9e67b44b2c915f468e653b 434 SUPERFAMILY SSF51126 26 433 2.48E-84 T 13-10-2018 IPR011050 Pectin lyase fold/virulence factor COP00_23920 915a15b00c9e67b44b2c915f468e653b 434 Gene3D G3DSA:2.160.20.10 24 434 2.2E-167 T 13-10-2018 IPR012334 Pectin lyase fold COP00_16170 cc314ccca9009cc14ccaf065a4eb00bc 146 Gene3D G3DSA:1.20.120.490 25 146 7.7E-37 T 13-10-2018 IPR024042 TM1646-like domain superfamily COP00_16170 cc314ccca9009cc14ccaf065a4eb00bc 146 Pfam PF03885 Protein of unknown function (DUF327) 19 145 1.1E-38 T 13-10-2018 IPR005585 Protein of unknown function DUF327 COP00_16170 cc314ccca9009cc14ccaf065a4eb00bc 146 SUPERFAMILY SSF158397 27 146 8.37E-34 T 13-10-2018 IPR024042 TM1646-like domain superfamily COP00_20520 2a7cd74a6108f40e45c3311043a71fbc 385 Pfam PF07690 Major Facilitator Superfamily 9 343 6.1E-45 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 COP00_20520 2a7cd74a6108f40e45c3311043a71fbc 385 Gene3D G3DSA:1.20.1250.20 2 378 4.8E-68 T 13-10-2018 COP00_20520 2a7cd74a6108f40e45c3311043a71fbc 385 SUPERFAMILY SSF103473 3 375 1.44E-71 T 13-10-2018 IPR036259 MFS transporter superfamily COP00_23125 2afdc6de81063054c68ff14af70e9b98 93 Gene3D G3DSA:3.30.70.100 1 93 4.0E-28 T 13-10-2018 COP00_23125 2afdc6de81063054c68ff14af70e9b98 93 SUPERFAMILY SSF54909 1 81 3.58E-19 T 13-10-2018 IPR011008 Dimeric alpha-beta barrel COP00_23125 2afdc6de81063054c68ff14af70e9b98 93 Pfam PF03992 Antibiotic biosynthesis monooxygenase 5 77 5.3E-9 T 13-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain COP00_10245 1b6d69f5138cc004d82f50f49e40e683 661 Gene3D G3DSA:1.10.8.500 303 353 3.0E-9 T 13-10-2018 COP00_10245 1b6d69f5138cc004d82f50f49e40e683 661 Gene3D G3DSA:3.30.450.20 72 183 1.4E-32 T 13-10-2018 COP00_10245 1b6d69f5138cc004d82f50f49e40e683 661 SUPERFAMILY SSF58104 323 659 2.62E-74 T 13-10-2018 COP00_10245 1b6d69f5138cc004d82f50f49e40e683 661 Pfam PF00672 HAMP domain 303 351 1.8E-14 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 COP00_10245 1b6d69f5138cc004d82f50f49e40e683 661 Gene3D G3DSA:1.10.287.950 354 659 2.6E-70 T 13-10-2018 COP00_10245 1b6d69f5138cc004d82f50f49e40e683 661 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 430 613 2.8E-56 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 COP00_10245 1b6d69f5138cc004d82f50f49e40e683 661 SMART SM00304 303 355 2.9E-17 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 COP00_10245 1b6d69f5138cc004d82f50f49e40e683 661 SMART SM00283 384 659 2.6E-86 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 COP00_10245 1b6d69f5138cc004d82f50f49e40e683 661 Gene3D G3DSA:3.30.450.20 60 274 1.4E-32 T 13-10-2018 COP00_10245 1b6d69f5138cc004d82f50f49e40e683 661 SUPERFAMILY SSF103190 85 191 2.67E-10 T 13-10-2018 IPR029151 Periplasmic sensor-like domain superfamily COP00_10245 1b6d69f5138cc004d82f50f49e40e683 661 Pfam PF02743 Cache domain 43 264 1.9E-27 T 13-10-2018 IPR033479 Double Cache domain 1 COP00_10245 1b6d69f5138cc004d82f50f49e40e683 661 SMART SM00319 33 151 2.0E-24 T 13-10-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 COP00_11135 a82bcb782ed15edc4fd09b9f9475d584 462 PRINTS PR00149 Fumarate lyase superfamily signature 269 296 1.4E-34 T 13-10-2018 IPR000362 Fumarate lyase family COP00_11135 a82bcb782ed15edc4fd09b9f9475d584 462 PRINTS PR00149 Fumarate lyase superfamily signature 315 331 1.4E-34 T 13-10-2018 IPR000362 Fumarate lyase family COP00_11135 a82bcb782ed15edc4fd09b9f9475d584 462 PRINTS PR00149 Fumarate lyase superfamily signature 178 196 1.4E-34 T 13-10-2018 IPR000362 Fumarate lyase family COP00_11135 a82bcb782ed15edc4fd09b9f9475d584 462 PRINTS PR00149 Fumarate lyase superfamily signature 132 150 1.4E-34 T 13-10-2018 IPR000362 Fumarate lyase family COP00_11135 a82bcb782ed15edc4fd09b9f9475d584 462 ProSitePatterns PS00163 Fumarate lyases signature. 315 324 - T 13-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 COP00_11135 a82bcb782ed15edc4fd09b9f9475d584 462 Pfam PF00206 Lyase 11 340 2.3E-118 T 13-10-2018 IPR022761 Fumarate lyase, N-terminal COP00_11135 a82bcb782ed15edc4fd09b9f9475d584 462 SUPERFAMILY SSF48557 2 458 2.51E-155 T 13-10-2018 IPR008948 L-Aspartase-like GO:0003824 COP00_11135 a82bcb782ed15edc4fd09b9f9475d584 462 Gene3D G3DSA:1.10.275.10 4 136 8.8E-55 T 13-10-2018 IPR024083 Fumarase/histidase, N-terminal COP00_11135 a82bcb782ed15edc4fd09b9f9475d584 462 Pfam PF10415 Fumarase C C-terminus 406 458 4.4E-27 T 13-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 COP00_11135 a82bcb782ed15edc4fd09b9f9475d584 462 PRINTS PR00145 Argininosuccinate lyase family signature 173 193 8.7E-6 T 13-10-2018 COP00_11135 a82bcb782ed15edc4fd09b9f9475d584 462 PRINTS PR00145 Argininosuccinate lyase family signature 315 331 8.7E-6 T 13-10-2018 COP00_11135 a82bcb782ed15edc4fd09b9f9475d584 462 Gene3D G3DSA:1.20.200.10 137 405 2.7E-115 T 13-10-2018 COP00_11135 a82bcb782ed15edc4fd09b9f9475d584 462 Gene3D G3DSA:1.10.40.30 406 462 1.9E-29 T 13-10-2018 COP00_11135 a82bcb782ed15edc4fd09b9f9475d584 462 TIGRFAM TIGR00979 fumC_II: fumarate hydratase, class II 3 459 1.5E-248 T 13-10-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 COP00_11135 a82bcb782ed15edc4fd09b9f9475d584 462 Hamap MF_00743 Fumarate hydratase class II [fumC]. 3 460 90.447 T 13-10-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 COP00_13275 6443c9b57373757286fbbac1033ce531 710 Gene3D G3DSA:3.40.50.11820 342 703 6.1E-146 T 13-10-2018 COP00_13275 6443c9b57373757286fbbac1033ce531 710 Pfam PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase 340 710 1.4E-132 T 13-10-2018 IPR007554 CDP-glycerol glycerophosphotransferase GO:0016020|GO:0047355 COP00_13275 6443c9b57373757286fbbac1033ce531 710 Gene3D G3DSA:3.40.50.12580 514 696 6.1E-146 T 13-10-2018 COP00_13275 6443c9b57373757286fbbac1033ce531 710 SUPERFAMILY SSF53756 473 708 3.87E-12 T 13-10-2018 COP00_21195 bdb411c501a9b5474d7b48111d9f34bb 589 ProSitePatterns PS00211 ABC transporters family signature. 488 502 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 COP00_21195 bdb411c501a9b5474d7b48111d9f34bb 589 SMART SM00382 376 562 1.3E-13 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_21195 bdb411c501a9b5474d7b48111d9f34bb 589 Pfam PF00664 ABC transporter transmembrane region 28 303 3.0E-42 T 13-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 COP00_21195 bdb411c501a9b5474d7b48111d9f34bb 589 Gene3D G3DSA:3.40.50.300 337 588 1.8E-93 T 13-10-2018 COP00_21195 bdb411c501a9b5474d7b48111d9f34bb 589 SUPERFAMILY SSF90123 14 336 6.02E-79 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 COP00_21195 bdb411c501a9b5474d7b48111d9f34bb 589 Pfam PF00005 ABC transporter 367 516 3.4E-34 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 COP00_21195 bdb411c501a9b5474d7b48111d9f34bb 589 Gene3D G3DSA:1.20.1560.10 12 332 3.0E-105 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 COP00_21195 bdb411c501a9b5474d7b48111d9f34bb 589 SUPERFAMILY SSF52540 340 586 4.65E-97 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_13135 c7149f81d15f7bdec2c55c38f432ed5d 229 SMART SM00448 4 117 1.2E-27 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 COP00_13135 c7149f81d15f7bdec2c55c38f432ed5d 229 SUPERFAMILY SSF52172 3 136 2.85E-34 T 13-10-2018 IPR011006 CheY-like superfamily COP00_13135 c7149f81d15f7bdec2c55c38f432ed5d 229 Pfam PF00196 Bacterial regulatory proteins, luxR family 165 220 7.9E-25 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 COP00_13135 c7149f81d15f7bdec2c55c38f432ed5d 229 Pfam PF00072 Response regulator receiver domain 6 118 1.2E-31 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 COP00_13135 c7149f81d15f7bdec2c55c38f432ed5d 229 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 180 196 1.0E-14 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 COP00_13135 c7149f81d15f7bdec2c55c38f432ed5d 229 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 166 180 1.0E-14 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 COP00_13135 c7149f81d15f7bdec2c55c38f432ed5d 229 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 196 208 1.0E-14 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 COP00_13135 c7149f81d15f7bdec2c55c38f432ed5d 229 ProSitePatterns PS00622 LuxR-type HTH domain signature. 180 207 - T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 COP00_13135 c7149f81d15f7bdec2c55c38f432ed5d 229 SUPERFAMILY SSF46894 152 227 2.21E-24 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 COP00_13135 c7149f81d15f7bdec2c55c38f432ed5d 229 Gene3D G3DSA:3.40.50.12740 4 226 8.1E-70 T 13-10-2018 COP00_13135 c7149f81d15f7bdec2c55c38f432ed5d 229 SMART SM00421 163 220 9.7E-29 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 COP00_14835 c9916915d264417ce8102de7d6571914 469 Gene3D G3DSA:1.10.10.10 6 85 8.4E-19 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_14835 c9916915d264417ce8102de7d6571914 469 SUPERFAMILY SSF53383 106 468 1.91E-86 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase COP00_14835 c9916915d264417ce8102de7d6571914 469 Pfam PF00392 Bacterial regulatory proteins, gntR family 17 79 3.5E-12 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 COP00_14835 c9916915d264417ce8102de7d6571914 469 Pfam PF00155 Aminotransferase class I and II 119 462 4.2E-21 T 13-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 COP00_14835 c9916915d264417ce8102de7d6571914 469 SUPERFAMILY SSF46785 13 87 2.09E-17 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_14835 c9916915d264417ce8102de7d6571914 469 Gene3D G3DSA:3.40.640.10 99 461 2.0E-125 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 COP00_14835 c9916915d264417ce8102de7d6571914 469 SMART SM00345 20 79 3.0E-11 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 COP00_17590 1081fd555cdc71bda99f95632d21380b 351 SUPERFAMILY SSF56796 10 349 4.71E-58 T 13-10-2018 COP00_17590 1081fd555cdc71bda99f95632d21380b 351 PIRSF PIRSF000112 1 351 1.2E-117 T 13-10-2018 IPR016205 Glycerol dehydrogenase GO:0016614|GO:0046872|GO:0055114 KEGG: 00564+1.1.1.261|MetaCyc: PWY-6349 COP00_17590 1081fd555cdc71bda99f95632d21380b 351 Gene3D G3DSA:3.40.50.1970 8 152 8.2E-26 T 13-10-2018 COP00_17590 1081fd555cdc71bda99f95632d21380b 351 Pfam PF00465 Iron-containing alcohol dehydrogenase 11 332 4.7E-50 T 13-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 COP00_17590 1081fd555cdc71bda99f95632d21380b 351 Gene3D G3DSA:1.20.1090.10 155 351 6.3E-56 T 13-10-2018 COP00_21615 4a8873413ec682518cef5cbf7fe49221 303 Gene3D G3DSA:3.40.190.120 137 241 1.1E-97 T 13-10-2018 COP00_21615 4a8873413ec682518cef5cbf7fe49221 303 Gene3D G3DSA:3.40.190.10 35 297 1.1E-97 T 13-10-2018 COP00_21615 4a8873413ec682518cef5cbf7fe49221 303 SUPERFAMILY SSF53850 32 302 9.05E-69 T 13-10-2018 COP00_21615 4a8873413ec682518cef5cbf7fe49221 303 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 33 298 1.2E-62 T 13-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 COP00_12880 2d7963c48dbd8fc808eaba0a3ef768cc 391 TIGRFAM TIGR00443 hisZ_biosyn_reg: ATP phosphoribosyltransferase, regulatory subunit 11 322 1.6E-97 T 13-10-2018 IPR004517 ATP phosphoribosyltransferase regulatory subunit GO:0000105|GO:0005737 COP00_12880 2d7963c48dbd8fc808eaba0a3ef768cc 391 Gene3D G3DSA:3.40.50.12590 323 390 1.2E-19 T 13-10-2018 COP00_12880 2d7963c48dbd8fc808eaba0a3ef768cc 391 SUPERFAMILY SSF55681 4 321 3.11E-64 T 13-10-2018 COP00_12880 2d7963c48dbd8fc808eaba0a3ef768cc 391 Gene3D G3DSA:3.30.930.10 1 322 7.0E-105 T 13-10-2018 COP00_12880 2d7963c48dbd8fc808eaba0a3ef768cc 391 PIRSF PIRSF001549 1 380 1.8E-85 T 13-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 COP00_12880 2d7963c48dbd8fc808eaba0a3ef768cc 391 Pfam PF13393 Histidyl-tRNA synthetase 9 317 4.3E-77 T 13-10-2018 COP00_12880 2d7963c48dbd8fc808eaba0a3ef768cc 391 Hamap MF_00125 ATP phosphoribosyltransferase regulatory subunit [hisZ]. 16 371 34.921 T 13-10-2018 IPR004517 ATP phosphoribosyltransferase regulatory subunit GO:0000105|GO:0005737 COP00_23430 f5b2a7a279ebcac5acd14d1e1de6131f 209 TIGRFAM TIGR01543 proheadase_HK97: phage prohead protease, HK97 family 26 172 1.1E-20 T 13-10-2018 IPR006433 Prohead protease COP00_23430 f5b2a7a279ebcac5acd14d1e1de6131f 209 Pfam PF04586 Caudovirus prohead serine protease 13 184 6.7E-37 T 13-10-2018 IPR006433 Prohead protease COP00_07865 dac4af350ae1bc99f52b8b5043758efe 162 TIGRFAM TIGR00854 pts-sorbose: PTS system, mannose/fructose/sorbose family, IIB component 2 152 3.2E-68 T 13-10-2018 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup GO:0005737|GO:0008982|GO:0009401 COP00_07865 dac4af350ae1bc99f52b8b5043758efe 162 Gene3D G3DSA:3.40.35.10 1 162 9.4E-57 T 13-10-2018 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily GO:0005737|GO:0008982|GO:0009401 COP00_07865 dac4af350ae1bc99f52b8b5043758efe 162 SUPERFAMILY SSF52728 1 159 1.44E-53 T 13-10-2018 IPR036667 Phosphotransferase system, sorbose subfamily IIB component superfamily GO:0005737|GO:0008982|GO:0009401 COP00_07865 dac4af350ae1bc99f52b8b5043758efe 162 Pfam PF03830 PTS system sorbose subfamily IIB component 3 149 7.4E-51 T 13-10-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 COP00_16710 c05da7291a8f2a8f0ad20b6c2a0ad181 218 SMART SM00322 59 124 1.4E-8 T 13-10-2018 IPR004087 K Homology domain GO:0003676 COP00_16710 c05da7291a8f2a8f0ad20b6c2a0ad181 218 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 208 2.2E-96 T 13-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 COP00_16710 c05da7291a8f2a8f0ad20b6c2a0ad181 218 Gene3D G3DSA:3.30.1140.32 107 207 3.1E-40 T 13-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 COP00_16710 c05da7291a8f2a8f0ad20b6c2a0ad181 218 ProSitePatterns PS00548 Ribosomal protein S3 signature. 162 196 - T 13-10-2018 IPR018280 Ribosomal protein S3, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 COP00_16710 c05da7291a8f2a8f0ad20b6c2a0ad181 218 SUPERFAMILY SSF54814 2 105 5.76E-39 T 13-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 COP00_16710 c05da7291a8f2a8f0ad20b6c2a0ad181 218 Pfam PF07650 KH domain 37 109 7.3E-22 T 13-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 COP00_16710 c05da7291a8f2a8f0ad20b6c2a0ad181 218 SUPERFAMILY SSF54821 106 205 1.57E-37 T 13-10-2018 IPR036419 Ribosomal protein S3, C-terminal domain superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 COP00_16710 c05da7291a8f2a8f0ad20b6c2a0ad181 218 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 205 38.225 T 13-10-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 COP00_16710 c05da7291a8f2a8f0ad20b6c2a0ad181 218 Pfam PF00189 Ribosomal protein S3, C-terminal domain 119 201 6.7E-39 T 13-10-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 COP00_16710 c05da7291a8f2a8f0ad20b6c2a0ad181 218 Gene3D G3DSA:3.30.300.20 17 106 3.4E-33 T 13-10-2018 IPR015946 K homology domain-like, alpha/beta COP00_01260 f6d9f381b173a418cd5b765452a8a302 173 Pfam PF05239 PRC-barrel domain 97 170 3.9E-13 T 13-10-2018 IPR027275 PRC-barrel domain COP00_01260 f6d9f381b173a418cd5b765452a8a302 173 Pfam PF01782 RimM N-terminal domain 8 91 9.0E-25 T 13-10-2018 IPR002676 RimM, N-terminal GO:0006364 COP00_01260 f6d9f381b173a418cd5b765452a8a302 173 SUPERFAMILY SSF50346 100 170 6.08E-20 T 13-10-2018 IPR011033 PRC-barrel-like superfamily COP00_01260 f6d9f381b173a418cd5b765452a8a302 173 Gene3D G3DSA:2.40.30.60 6 93 9.0E-22 T 13-10-2018 IPR036976 RimM, N-terminal domain superfamily GO:0006364 COP00_01260 f6d9f381b173a418cd5b765452a8a302 173 Gene3D G3DSA:2.30.30.240 95 173 3.8E-22 T 13-10-2018 COP00_01260 f6d9f381b173a418cd5b765452a8a302 173 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 5 169 1.9E-53 T 13-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 COP00_01260 f6d9f381b173a418cd5b765452a8a302 173 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 5 170 24.2 T 13-10-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 COP00_01260 f6d9f381b173a418cd5b765452a8a302 173 SUPERFAMILY SSF50447 4 92 9.42E-23 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily COP00_23890 c20187dd0d02e1f1019cad53acb27c13 362 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 13 123 3.0E-17 T 13-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain COP00_23890 c20187dd0d02e1f1019cad53acb27c13 362 Gene3D G3DSA:3.20.20.120 115 352 1.5E-114 T 13-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily COP00_23890 c20187dd0d02e1f1019cad53acb27c13 362 Pfam PF13378 Enolase C-terminal domain-like 143 354 9.6E-52 T 13-10-2018 IPR029065 Enolase C-terminal domain-like COP00_23890 c20187dd0d02e1f1019cad53acb27c13 362 SMART SM00922 140 239 6.9E-28 T 13-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal COP00_23890 c20187dd0d02e1f1019cad53acb27c13 362 Gene3D G3DSA:3.30.390.10 1 354 1.5E-114 T 13-10-2018 IPR029017 Enolase-like, N-terminal COP00_23890 c20187dd0d02e1f1019cad53acb27c13 362 SUPERFAMILY SSF54826 1 124 2.83E-33 T 13-10-2018 COP00_23890 c20187dd0d02e1f1019cad53acb27c13 362 SUPERFAMILY SSF51604 113 354 7.73E-68 T 13-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily COP00_18770 341b8d15b35e7413d589d2e348869f79 146 Gene3D G3DSA:3.40.930.10 3 142 1.7E-43 T 13-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 COP00_18770 341b8d15b35e7413d589d2e348869f79 146 SUPERFAMILY SSF55804 4 142 9.81E-41 T 13-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 COP00_18770 341b8d15b35e7413d589d2e348869f79 146 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 4 142 7.0E-36 T 13-10-2018 IPR002178 PTS EIIA type-2 domain COP00_18770 341b8d15b35e7413d589d2e348869f79 146 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 48 64 - T 13-10-2018 IPR002178 PTS EIIA type-2 domain COP00_14815 4dc869c6112d9786142096bb5531bc6c 117 SUPERFAMILY SSF159121 29 114 1.15E-27 T 13-10-2018 IPR036166 YxeA-like superfamily COP00_14815 4dc869c6112d9786142096bb5531bc6c 117 TIGRFAM TIGR01655 yxeA_fam: conserved hypothetical protein 1 114 2.7E-32 T 13-10-2018 IPR006542 Protein of unknown function DUF1093 COP00_14815 4dc869c6112d9786142096bb5531bc6c 117 Gene3D G3DSA:2.40.50.480 29 115 3.4E-33 T 13-10-2018 IPR036166 YxeA-like superfamily COP00_14815 4dc869c6112d9786142096bb5531bc6c 117 Pfam PF06486 Protein of unknown function (DUF1093) 35 102 1.7E-21 T 13-10-2018 IPR006542 Protein of unknown function DUF1093 COP00_14845 2786dcb9dd8150eb52bb8fbdac498283 749 Gene3D G3DSA:3.90.550.10 93 312 1.7E-84 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases COP00_14845 2786dcb9dd8150eb52bb8fbdac498283 749 SUPERFAMILY SSF141371 527 622 2.55E-6 T 13-10-2018 COP00_14845 2786dcb9dd8150eb52bb8fbdac498283 749 SUPERFAMILY SSF141371 682 745 2.75E-7 T 13-10-2018 COP00_14845 2786dcb9dd8150eb52bb8fbdac498283 749 Pfam PF07238 PilZ domain 524 621 4.9E-8 T 13-10-2018 IPR009875 PilZ domain GO:0035438 COP00_14845 2786dcb9dd8150eb52bb8fbdac498283 749 Pfam PF07238 PilZ domain 673 745 1.2E-8 T 13-10-2018 IPR009875 PilZ domain GO:0035438 COP00_14845 2786dcb9dd8150eb52bb8fbdac498283 749 Pfam PF00535 Glycosyl transferase family 2 106 276 2.5E-33 T 13-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 COP00_14845 2786dcb9dd8150eb52bb8fbdac498283 749 PRINTS PR01439 Cellulose synthase subunit A signature 58 83 1.0E-17 T 13-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 COP00_14845 2786dcb9dd8150eb52bb8fbdac498283 749 PRINTS PR01439 Cellulose synthase subunit A signature 461 485 1.0E-17 T 13-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 COP00_14845 2786dcb9dd8150eb52bb8fbdac498283 749 PRINTS PR01439 Cellulose synthase subunit A signature 352 378 1.0E-17 T 13-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 COP00_14845 2786dcb9dd8150eb52bb8fbdac498283 749 PRINTS PR01439 Cellulose synthase subunit A signature 421 440 1.0E-17 T 13-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 COP00_14845 2786dcb9dd8150eb52bb8fbdac498283 749 PRINTS PR01439 Cellulose synthase subunit A signature 193 217 1.0E-17 T 13-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 COP00_14845 2786dcb9dd8150eb52bb8fbdac498283 749 PRINTS PR01439 Cellulose synthase subunit A signature 112 131 1.0E-17 T 13-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 COP00_14845 2786dcb9dd8150eb52bb8fbdac498283 749 PRINTS PR01439 Cellulose synthase subunit A signature 30 50 1.0E-17 T 13-10-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 COP00_14845 2786dcb9dd8150eb52bb8fbdac498283 749 SUPERFAMILY SSF53448 92 375 1.13E-49 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases COP00_04480 575f3964adf4f41e1b1839327c71fd4c 199 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 2.0E-9 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 COP00_04480 575f3964adf4f41e1b1839327c71fd4c 199 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 2.0E-9 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 COP00_04480 575f3964adf4f41e1b1839327c71fd4c 199 ProSitePatterns PS01081 TetR-type HTH domain signature. 24 55 - T 13-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site COP00_04480 575f3964adf4f41e1b1839327c71fd4c 199 SUPERFAMILY SSF48498 76 191 2.82E-10 T 13-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily COP00_04480 575f3964adf4f41e1b1839327c71fd4c 199 SUPERFAMILY SSF46689 3 70 2.29E-14 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 COP00_04480 575f3964adf4f41e1b1839327c71fd4c 199 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 58 5.5E-15 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 COP00_04480 575f3964adf4f41e1b1839327c71fd4c 199 Gene3D G3DSA:1.10.357.10 4 198 6.2E-23 T 13-10-2018 COP00_00400 6897293ecdedcd57736d9330f125f1d3 165 SUPERFAMILY SSF54690 5 137 1.44E-46 T 13-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 COP00_00400 6897293ecdedcd57736d9330f125f1d3 165 Pfam PF02391 MoaE protein 7 118 4.9E-37 T 13-10-2018 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 COP00_00400 6897293ecdedcd57736d9330f125f1d3 165 Gene3D G3DSA:3.90.1170.40 2 146 9.9E-54 T 13-10-2018 IPR036563 Molybdopterin biosynthesis MoaE subunit superfamily GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|MetaCyc: PWY-7887|Reactome: R-HSA-947581 COP00_15895 5adf049527dba379a1f27acd914c025f 282 SMART SM00470 30 121 3.0E-36 T 13-10-2018 IPR003115 ParB/Sulfiredoxin COP00_15895 5adf049527dba379a1f27acd914c025f 282 SUPERFAMILY SSF110849 22 124 4.71E-29 T 13-10-2018 IPR036086 ParB/Sulfiredoxin superfamily COP00_15895 5adf049527dba379a1f27acd914c025f 282 SUPERFAMILY SSF109709 115 220 4.97E-33 T 13-10-2018 COP00_15895 5adf049527dba379a1f27acd914c025f 282 TIGRFAM TIGR04285 nucleoid_noc: nucleoid occlusion protein 28 282 6.8E-113 T 13-10-2018 IPR023705 Nucleoid occlusion protein COP00_15895 5adf049527dba379a1f27acd914c025f 282 Gene3D G3DSA:1.10.10.2830 108 221 3.7E-36 T 13-10-2018 COP00_15895 5adf049527dba379a1f27acd914c025f 282 Hamap MF_02015 Nucleoid occlusion protein [noc]. 3 282 38.612 T 13-10-2018 IPR023705 Nucleoid occlusion protein COP00_15895 5adf049527dba379a1f27acd914c025f 282 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 26 206 2.9E-62 T 13-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 COP00_15895 5adf049527dba379a1f27acd914c025f 282 Pfam PF02195 ParB-like nuclease domain 32 120 3.0E-28 T 13-10-2018 IPR003115 ParB/Sulfiredoxin COP00_15895 5adf049527dba379a1f27acd914c025f 282 Gene3D G3DSA:3.90.1530.30 43 107 1.3E-25 T 13-10-2018 COP00_18500 e661e0307257a5e27111b533e8ded468 305 Gene3D G3DSA:3.40.630.30 156 289 1.1E-28 T 13-10-2018 COP00_18500 e661e0307257a5e27111b533e8ded468 305 SUPERFAMILY SSF55729 156 286 2.53E-27 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase COP00_18500 e661e0307257a5e27111b533e8ded468 305 SMART SM00347 28 128 7.4E-4 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 COP00_18500 e661e0307257a5e27111b533e8ded468 305 Pfam PF00583 Acetyltransferase (GNAT) family 180 279 6.1E-18 T 13-10-2018 IPR000182 GNAT domain COP00_18500 e661e0307257a5e27111b533e8ded468 305 Pfam PF01047 MarR family 36 92 4.5E-11 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 COP00_18500 e661e0307257a5e27111b533e8ded468 305 Gene3D G3DSA:1.10.10.10 1 146 2.3E-20 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_18500 e661e0307257a5e27111b533e8ded468 305 SUPERFAMILY SSF46785 14 143 1.43E-20 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_03565 1d6d69da8a0d2b4f1f98b1800c86c240 811 Gene3D G3DSA:2.40.300.10 645 809 1.1E-56 T 13-10-2018 COP00_03565 1d6d69da8a0d2b4f1f98b1800c86c240 811 SMART SM00710 298 319 780.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat COP00_03565 1d6d69da8a0d2b4f1f98b1800c86c240 811 SMART SM00710 203 225 670.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat COP00_03565 1d6d69da8a0d2b4f1f98b1800c86c240 811 SMART SM00710 361 387 6200.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat COP00_03565 1d6d69da8a0d2b4f1f98b1800c86c240 811 SMART SM00710 423 445 20.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat COP00_03565 1d6d69da8a0d2b4f1f98b1800c86c240 811 SMART SM00710 241 263 110.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat COP00_03565 1d6d69da8a0d2b4f1f98b1800c86c240 811 SMART SM00710 264 296 230.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat COP00_03565 1d6d69da8a0d2b4f1f98b1800c86c240 811 SMART SM00710 452 474 510.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat COP00_03565 1d6d69da8a0d2b4f1f98b1800c86c240 811 Pfam PF11962 Peptidase_G2, IMC autoproteolytic cleavage domain 597 811 2.5E-72 T 13-10-2018 IPR021865 Peptidase G2, IMC autoproteolytic cleavage domain COP00_03565 1d6d69da8a0d2b4f1f98b1800c86c240 811 SUPERFAMILY SSF51126 84 379 1.73E-34 T 13-10-2018 IPR011050 Pectin lyase fold/virulence factor COP00_03565 1d6d69da8a0d2b4f1f98b1800c86c240 811 Gene3D G3DSA:4.10.80.40 697 739 1.1E-56 T 13-10-2018 COP00_03565 1d6d69da8a0d2b4f1f98b1800c86c240 811 Gene3D G3DSA:2.160.20.10 81 531 8.0E-129 T 13-10-2018 IPR012334 Pectin lyase fold COP00_03565 1d6d69da8a0d2b4f1f98b1800c86c240 811 Pfam PF12708 Pectate lyase superfamily protein 86 309 4.3E-21 T 13-10-2018 IPR024535 Pectate lyase superfamily protein COP00_21205 1206bc02aadbc41073d2f77ebd7701aa 312 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 229 291 1.6E-13 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 COP00_21205 1206bc02aadbc41073d2f77ebd7701aa 312 SMART SM00382 35 227 3.1E-15 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_21205 1206bc02aadbc41073d2f77ebd7701aa 312 SUPERFAMILY SSF52540 5 248 1.1E-73 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_21205 1206bc02aadbc41073d2f77ebd7701aa 312 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 227 311 4.6E-22 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 COP00_21205 1206bc02aadbc41073d2f77ebd7701aa 312 Gene3D G3DSA:3.40.50.300 3 312 3.9E-98 T 13-10-2018 COP00_21205 1206bc02aadbc41073d2f77ebd7701aa 312 Pfam PF00005 ABC transporter 27 177 5.6E-35 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 COP00_21205 1206bc02aadbc41073d2f77ebd7701aa 312 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 COP00_07210 cfa82982d882583a1c0b8eca2574d57a 256 TIGRFAM TIGR00613 reco: DNA repair protein RecO 3 243 6.4E-82 T 13-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 COP00_07210 cfa82982d882583a1c0b8eca2574d57a 256 Gene3D G3DSA:1.20.1440.120 88 225 2.1E-20 T 13-10-2018 COP00_07210 cfa82982d882583a1c0b8eca2574d57a 256 Gene3D G3DSA:2.40.50.140 3 76 2.1E-15 T 13-10-2018 COP00_07210 cfa82982d882583a1c0b8eca2574d57a 256 SUPERFAMILY SSF50249 1 77 2.91E-19 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold COP00_07210 cfa82982d882583a1c0b8eca2574d57a 256 Pfam PF11967 Recombination protein O N terminal 1 77 7.1E-26 T 13-10-2018 IPR022572 DNA replication/recombination mediator RecO, N-terminal COP00_07210 cfa82982d882583a1c0b8eca2574d57a 256 Pfam PF02565 Recombination protein O C terminal 82 238 4.8E-41 T 13-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 COP00_07210 cfa82982d882583a1c0b8eca2574d57a 256 SUPERFAMILY SSF57863 80 231 1.65E-46 T 13-10-2018 IPR037278 ARFGAP/RecO-like zinc finger COP00_07210 cfa82982d882583a1c0b8eca2574d57a 256 Gene3D G3DSA:3.30.60.100 146 185 2.1E-20 T 13-10-2018 COP00_07210 cfa82982d882583a1c0b8eca2574d57a 256 Hamap MF_00201 DNA repair protein RecO [recO]. 1 243 30.961 T 13-10-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 COP00_15795 5afecf4419a128632cf10b15b739f9af 299 Hamap MF_00068 N-acetylmuramic acid 6-phosphate etherase [murQ]. 1 291 36.262 T 13-10-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 COP00_15795 5afecf4419a128632cf10b15b739f9af 299 Pfam PF01380 SIS domain 124 204 1.3E-8 T 13-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 COP00_15795 5afecf4419a128632cf10b15b739f9af 299 SUPERFAMILY SSF46934 238 270 5.11E-5 T 13-10-2018 IPR009060 UBA-like superfamily GO:0005515 COP00_15795 5afecf4419a128632cf10b15b739f9af 299 Gene3D G3DSA:1.10.8.1080 215 293 1.9E-22 T 13-10-2018 COP00_15795 5afecf4419a128632cf10b15b739f9af 299 Gene3D G3DSA:3.40.50.10490 1 214 3.2E-70 T 13-10-2018 COP00_15795 5afecf4419a128632cf10b15b739f9af 299 SUPERFAMILY SSF53697 3 245 9.34E-65 T 13-10-2018 COP00_15795 5afecf4419a128632cf10b15b739f9af 299 TIGRFAM TIGR00274 TIGR00274: N-acetylmuramic acid 6-phosphate etherase 3 291 1.8E-100 T 13-10-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 COP00_05890 6967672f536d1068e37e3662a8a54a86 483 Gene3D G3DSA:1.20.1480.50 161 251 1.0E-16 T 13-10-2018 COP00_05890 6967672f536d1068e37e3662a8a54a86 483 SUPERFAMILY SSF47384 246 326 7.26E-16 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 COP00_05890 6967672f536d1068e37e3662a8a54a86 483 SUPERFAMILY SSF158472 193 244 6.67E-12 T 13-10-2018 COP00_05890 6967672f536d1068e37e3662a8a54a86 483 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 371 467 5.9E-13 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase COP00_05890 6967672f536d1068e37e3662a8a54a86 483 SMART SM00387 370 480 1.4E-20 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase COP00_05890 6967672f536d1068e37e3662a8a54a86 483 SMART SM00388 260 327 3.5E-10 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 COP00_05890 6967672f536d1068e37e3662a8a54a86 483 SUPERFAMILY SSF55874 329 473 3.01E-28 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily COP00_05890 6967672f536d1068e37e3662a8a54a86 483 Pfam PF00672 HAMP domain 195 242 1.6E-9 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 COP00_05890 6967672f536d1068e37e3662a8a54a86 483 Pfam PF00512 His Kinase A (phospho-acceptor) domain 262 325 1.3E-11 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 COP00_05890 6967672f536d1068e37e3662a8a54a86 483 SMART SM00304 193 245 3.6E-10 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 COP00_05890 6967672f536d1068e37e3662a8a54a86 483 Gene3D G3DSA:1.10.287.130 252 325 2.6E-18 T 13-10-2018 COP00_05890 6967672f536d1068e37e3662a8a54a86 483 Gene3D G3DSA:3.30.565.10 330 481 4.9E-27 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily COP00_05890 6967672f536d1068e37e3662a8a54a86 483 PRINTS PR00344 Bacterial sensor protein C-terminal signature 425 435 4.3E-7 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 COP00_05890 6967672f536d1068e37e3662a8a54a86 483 PRINTS PR00344 Bacterial sensor protein C-terminal signature 441 459 4.3E-7 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 COP00_14155 39a570bbb845ac52f63daf4dabb9c0e3 323 PIRSF PIRSF000428 1 323 2.3E-111 T 13-10-2018 IPR012147 Phosphate acetyl/butyryltransferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 COP00_14155 39a570bbb845ac52f63daf4dabb9c0e3 323 Gene3D G3DSA:3.40.50.10750 142 295 3.1E-136 T 13-10-2018 COP00_14155 39a570bbb845ac52f63daf4dabb9c0e3 323 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 19 319 1.7E-134 T 13-10-2018 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 COP00_14155 39a570bbb845ac52f63daf4dabb9c0e3 323 Pfam PF01515 Phosphate acetyl/butaryl transferase 6 319 5.8E-133 T 13-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 COP00_14155 39a570bbb845ac52f63daf4dabb9c0e3 323 Gene3D G3DSA:3.40.50.10950 18 319 3.1E-136 T 13-10-2018 COP00_14155 39a570bbb845ac52f63daf4dabb9c0e3 323 SUPERFAMILY SSF53659 6 322 1.56E-94 T 13-10-2018 COP00_06475 53233ca681c12307eae552e2406fac10 254 SUPERFAMILY SSF53850 1 250 1.98E-72 T 13-10-2018 COP00_06475 53233ca681c12307eae552e2406fac10 254 Gene3D G3DSA:3.40.190.10 115 208 8.4E-69 T 13-10-2018 COP00_06475 53233ca681c12307eae552e2406fac10 254 SMART SM00079 30 250 1.6E-5 T 13-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 COP00_06475 53233ca681c12307eae552e2406fac10 254 SMART SM00062 30 251 6.8E-79 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF COP00_06475 53233ca681c12307eae552e2406fac10 254 Gene3D G3DSA:3.40.190.10 32 248 8.4E-69 T 13-10-2018 COP00_06475 53233ca681c12307eae552e2406fac10 254 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 31 249 1.8E-65 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF COP00_18695 0fc565361735df7f759d6d4391c28ae6 480 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 9 23 - T 13-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 COP00_18695 0fc565361735df7f759d6d4391c28ae6 480 Gene3D G3DSA:3.40.1010.10 3 119 5.4E-40 T 13-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 COP00_18695 0fc565361735df7f759d6d4391c28ae6 480 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 5 215 2.1E-43 T 13-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 COP00_18695 0fc565361735df7f759d6d4391c28ae6 480 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 84 117 - T 13-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 COP00_18695 0fc565361735df7f759d6d4391c28ae6 480 Gene3D G3DSA:3.30.950.10 120 248 8.3E-45 T 13-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 COP00_18695 0fc565361735df7f759d6d4391c28ae6 480 Gene3D G3DSA:3.40.50.10090 249 358 1.4E-6 T 13-10-2018 COP00_18695 0fc565361735df7f759d6d4391c28ae6 480 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 4 239 1.3E-93 T 13-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 COP00_18695 0fc565361735df7f759d6d4391c28ae6 480 SUPERFAMILY SSF53790 3 244 1.28E-75 T 13-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 COP00_18695 0fc565361735df7f759d6d4391c28ae6 480 SUPERFAMILY SSF69618 251 463 7.98E-15 T 13-10-2018 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 COP00_18695 0fc565361735df7f759d6d4391c28ae6 480 PIRSF PIRSF036426 1 253 1.1E-95 T 13-10-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 COP00_22145 09662e9b5fed3db2ddbe6523e75441f1 118 Pfam PF12732 YtxH-like protein 9 92 8.2E-16 T 13-10-2018 IPR024623 Uncharacterised protein family YtxH COP00_22145 09662e9b5fed3db2ddbe6523e75441f1 118 SUPERFAMILY SSF47162 43 111 9.29E-6 T 13-10-2018 COP00_10730 6b4eb836b8144f168b59cf144f02ab52 368 Gene3D G3DSA:1.25.40.10 1 366 1.3E-105 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 COP00_10730 6b4eb836b8144f168b59cf144f02ab52 368 Pfam PF13424 Tetratricopeptide repeat 180 243 8.5E-8 T 13-10-2018 COP00_10730 6b4eb836b8144f168b59cf144f02ab52 368 SMART SM00028 327 360 140.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 COP00_10730 6b4eb836b8144f168b59cf144f02ab52 368 SMART SM00028 93 126 170.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 COP00_10730 6b4eb836b8144f168b59cf144f02ab52 368 SMART SM00028 253 286 160.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 COP00_10730 6b4eb836b8144f168b59cf144f02ab52 368 SMART SM00028 214 247 0.45 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 COP00_10730 6b4eb836b8144f168b59cf144f02ab52 368 SMART SM00028 133 166 63.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 COP00_10730 6b4eb836b8144f168b59cf144f02ab52 368 SUPERFAMILY SSF48452 90 316 9.49E-15 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 COP00_04755 b6e125e065c75f5456f2ba17b70dd66c 1863 SUPERFAMILY SSF55048 677 737 1.14E-10 T 13-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding COP00_04755 b6e125e065c75f5456f2ba17b70dd66c 1863 SUPERFAMILY SSF51735 1207 1437 3.33E-41 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily COP00_04755 b6e125e065c75f5456f2ba17b70dd66c 1863 SUPERFAMILY SSF52151 549 837 2.54E-69 T 13-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase COP00_04755 b6e125e065c75f5456f2ba17b70dd66c 1863 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 268 385 9.9E-43 T 13-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal COP00_04755 b6e125e065c75f5456f2ba17b70dd66c 1863 Pfam PF16197 Ketoacyl-synthetase C-terminal extension 388 501 2.6E-23 T 13-10-2018 IPR032821 Ketoacyl-synthetase, C-terminal extension Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 COP00_04755 b6e125e065c75f5456f2ba17b70dd66c 1863 Gene3D G3DSA:3.40.50.720 1208 1721 4.4E-127 T 13-10-2018 COP00_04755 b6e125e065c75f5456f2ba17b70dd66c 1863 SMART SM00825 Beta-ketoacyl synthase 11 438 3.4E-224 T 13-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain COP00_04755 b6e125e065c75f5456f2ba17b70dd66c 1863 Gene3D G3DSA:1.10.1200.10 1736 1856 3.9E-11 T 13-10-2018 IPR036736 ACP-like superfamily COP00_04755 b6e125e065c75f5456f2ba17b70dd66c 1863 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 9 260 2.5E-88 T 13-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal COP00_04755 b6e125e065c75f5456f2ba17b70dd66c 1863 SUPERFAMILY SSF53901 9 434 1.77E-103 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 COP00_04755 b6e125e065c75f5456f2ba17b70dd66c 1863 Gene3D G3DSA:3.40.47.10 6 444 9.4E-191 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 COP00_04755 b6e125e065c75f5456f2ba17b70dd66c 1863 Pfam PF00698 Acyl transferase domain 550 853 3.1E-75 T 13-10-2018 IPR014043 Acyl transferase COP00_04755 b6e125e065c75f5456f2ba17b70dd66c 1863 Pfam PF00550 Phosphopantetheine attachment site 1754 1817 5.7E-11 T 13-10-2018 IPR009081 Phosphopantetheine binding ACP domain COP00_04755 b6e125e065c75f5456f2ba17b70dd66c 1863 Pfam PF08659 KR domain 1453 1645 1.6E-62 T 13-10-2018 IPR013968 Polyketide synthase, ketoreductase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 COP00_04755 b6e125e065c75f5456f2ba17b70dd66c 1863 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 173 189 - T 13-10-2018 IPR018201 Beta-ketoacyl synthase, active site COP00_04755 b6e125e065c75f5456f2ba17b70dd66c 1863 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 1453 1647 3.0E-50 T 13-10-2018 COP00_04755 b6e125e065c75f5456f2ba17b70dd66c 1863 Pfam PF14765 Polyketide synthase dehydratase 911 1198 7.1E-73 T 13-10-2018 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 COP00_04755 b6e125e065c75f5456f2ba17b70dd66c 1863 Gene3D G3DSA:3.10.129.110 909 1195 1.3E-74 T 13-10-2018 COP00_04755 b6e125e065c75f5456f2ba17b70dd66c 1863 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 552 848 9.9E-115 T 13-10-2018 IPR020801 Polyketide synthase, acyl transferase domain COP00_04755 b6e125e065c75f5456f2ba17b70dd66c 1863 Gene3D G3DSA:3.40.366.10 550 852 1.9E-141 T 13-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 COP00_04755 b6e125e065c75f5456f2ba17b70dd66c 1863 SUPERFAMILY SSF51735 1452 1698 6.28E-40 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily COP00_04755 b6e125e065c75f5456f2ba17b70dd66c 1863 SMART SM00823 Phosphopantetheine attachment site 1751 1822 5.6E-8 T 13-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 COP00_04755 b6e125e065c75f5456f2ba17b70dd66c 1863 SUPERFAMILY SSF47336 1744 1824 1.96E-13 T 13-10-2018 IPR036736 ACP-like superfamily COP00_04755 b6e125e065c75f5456f2ba17b70dd66c 1863 Gene3D G3DSA:3.30.70.3290 454 895 1.9E-141 T 13-10-2018 COP00_04755 b6e125e065c75f5456f2ba17b70dd66c 1863 SMART SM00826 911 1072 1.6E-38 T 13-10-2018 IPR020807 Polyketide synthase, dehydratase domain Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 COP00_05855 964edebb36d5bee3240f7e402e0a76d5 525 Gene3D G3DSA:3.30.1330.90 317 450 1.2E-31 T 13-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 COP00_05855 964edebb36d5bee3240f7e402e0a76d5 525 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 189 211 - T 13-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site COP00_05855 964edebb36d5bee3240f7e402e0a76d5 525 SUPERFAMILY SSF55021 440 522 2.66E-22 T 13-10-2018 COP00_05855 964edebb36d5bee3240f7e402e0a76d5 525 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 105 278 2.9E-64 T 13-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 COP00_05855 964edebb36d5bee3240f7e402e0a76d5 525 SUPERFAMILY SSF51735 95 279 9.01E-63 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily COP00_05855 964edebb36d5bee3240f7e402e0a76d5 525 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 218 234 - T 13-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site COP00_05855 964edebb36d5bee3240f7e402e0a76d5 525 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 4 310 1.5E-34 T 13-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 COP00_05855 964edebb36d5bee3240f7e402e0a76d5 525 Gene3D G3DSA:3.30.70.260 451 525 3.0E-25 T 13-10-2018 COP00_05855 964edebb36d5bee3240f7e402e0a76d5 525 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 141 168 - T 13-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 COP00_05855 964edebb36d5bee3240f7e402e0a76d5 525 Gene3D G3DSA:3.40.50.720 5 302 1.9E-115 T 13-10-2018 COP00_05855 964edebb36d5bee3240f7e402e0a76d5 525 SUPERFAMILY SSF52283 32 126 3.97E-33 T 13-10-2018 COP00_05855 964edebb36d5bee3240f7e402e0a76d5 525 Gene3D G3DSA:3.40.50.720 95 276 1.9E-115 T 13-10-2018 COP00_05855 964edebb36d5bee3240f7e402e0a76d5 525 SUPERFAMILY SSF143548 317 446 1.67E-32 T 13-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 COP00_05855 964edebb36d5bee3240f7e402e0a76d5 525 TIGRFAM TIGR01327 PGDH: phosphoglycerate dehydrogenase 3 524 1.4E-225 T 13-10-2018 IPR006236 D-3-phosphoglycerate dehydrogenase GO:0004617|GO:0006564 KEGG: 00260+1.1.1.95|KEGG: 00680+1.1.1.95|Reactome: R-HSA-977347 COP00_05855 964edebb36d5bee3240f7e402e0a76d5 525 Pfam PF01842 ACT domain 452 514 1.8E-12 T 13-10-2018 IPR002912 ACT domain COP00_07645 7f3378cdae392df5d26abefe63e5c6c5 190 Gene3D G3DSA:3.40.250.10 90 185 3.1E-31 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily COP00_07645 7f3378cdae392df5d26abefe63e5c6c5 190 SUPERFAMILY SSF52821 89 184 3.8E-32 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily COP00_07645 7f3378cdae392df5d26abefe63e5c6c5 190 ProSitePatterns PS00380 Rhodanese signature 1. 118 129 - T 13-10-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350|MetaCyc: PWY-7927|Reactome: R-HSA-1614558 COP00_07645 7f3378cdae392df5d26abefe63e5c6c5 190 Pfam PF00581 Rhodanese-like domain 95 183 7.5E-17 T 13-10-2018 IPR001763 Rhodanese-like domain COP00_07645 7f3378cdae392df5d26abefe63e5c6c5 190 SMART SM00450 93 188 8.5E-25 T 13-10-2018 IPR001763 Rhodanese-like domain COP00_07645 7f3378cdae392df5d26abefe63e5c6c5 190 Gene3D G3DSA:3.30.110.40 1 78 1.0E-29 T 13-10-2018 IPR036868 TusA-like domain superfamily COP00_07645 7f3378cdae392df5d26abefe63e5c6c5 190 SUPERFAMILY SSF64307 3 76 1.09E-23 T 13-10-2018 IPR036868 TusA-like domain superfamily COP00_07645 7f3378cdae392df5d26abefe63e5c6c5 190 Pfam PF01206 Sulfurtransferase TusA 8 76 1.5E-21 T 13-10-2018 IPR001455 TusA-like domain COP00_07645 7f3378cdae392df5d26abefe63e5c6c5 190 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 9 33 - T 13-10-2018 IPR001455 TusA-like domain COP00_08715 8ce765cf8991371362643bb19dfa6a9c 231 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 132 160 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 COP00_08715 8ce765cf8991371362643bb19dfa6a9c 231 Pfam PF00106 short chain dehydrogenase 2 188 6.1E-39 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_08715 8ce765cf8991371362643bb19dfa6a9c 231 SUPERFAMILY SSF51735 2 229 1.97E-46 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily COP00_08715 8ce765cf8991371362643bb19dfa6a9c 231 Gene3D G3DSA:3.40.50.720 1 231 5.1E-48 T 13-10-2018 COP00_08715 8ce765cf8991371362643bb19dfa6a9c 231 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 119 135 2.2E-17 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_08715 8ce765cf8991371362643bb19dfa6a9c 231 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 185 2.2E-17 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_08715 8ce765cf8991371362643bb19dfa6a9c 231 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 2.2E-17 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_08715 8ce765cf8991371362643bb19dfa6a9c 231 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 74 85 2.2E-17 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_08715 8ce765cf8991371362643bb19dfa6a9c 231 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 145 164 2.2E-17 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_21030 e5675355ac45d3a5e74574dca64fe137 287 Gene3D G3DSA:3.10.180.10 9 133 5.9E-27 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase COP00_21030 e5675355ac45d3a5e74574dca64fe137 287 SUPERFAMILY SSF54593 169 285 6.88E-21 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase COP00_21030 e5675355ac45d3a5e74574dca64fe137 287 SUPERFAMILY SSF54593 3 169 5.37E-38 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase COP00_21030 e5675355ac45d3a5e74574dca64fe137 287 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 11 124 1.0E-9 T 13-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain COP00_21030 e5675355ac45d3a5e74574dca64fe137 287 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 170 261 7.9E-7 T 13-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain COP00_21030 e5675355ac45d3a5e74574dca64fe137 287 Gene3D G3DSA:3.10.180.10 169 287 4.7E-20 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase COP00_07660 a706ce094b21732810081899e42d236d 39 Gene3D G3DSA:3.40.250.10 1 39 3.2E-5 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily COP00_07660 a706ce094b21732810081899e42d236d 39 SUPERFAMILY SSF52821 1 31 3.6E-5 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily COP00_01175 751e8248ff2bf3fc154af96f178ddafe 554 SUPERFAMILY SSF101473 3 201 1.31E-47 T 13-10-2018 IPR036117 DhaL domain superfamily GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 COP00_01175 751e8248ff2bf3fc154af96f178ddafe 554 Gene3D G3DSA:1.25.40.340 16 179 3.8E-14 T 13-10-2018 IPR036117 DhaL domain superfamily GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 COP00_01175 751e8248ff2bf3fc154af96f178ddafe 554 Pfam PF02734 DAK2 domain 36 200 3.5E-44 T 13-10-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 COP00_01175 751e8248ff2bf3fc154af96f178ddafe 554 Pfam PF13684 Dihydroxyacetone kinase family 240 554 7.7E-128 T 13-10-2018 IPR033470 Uncharacterised protein, DhaK domain COP00_01175 751e8248ff2bf3fc154af96f178ddafe 554 SMART SM01120 36 201 3.2E-74 T 13-10-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 COP00_01175 751e8248ff2bf3fc154af96f178ddafe 554 SMART SM01121 240 554 4.6E-190 T 13-10-2018 IPR033470 Uncharacterised protein, DhaK domain COP00_01175 751e8248ff2bf3fc154af96f178ddafe 554 TIGRFAM TIGR03599 YloV: DAK2 domain fusion protein YloV 11 554 2.8E-218 T 13-10-2018 IPR019986 DAK2 domain-containing protein YloV COP00_22555 8fc7cac8b89136d884e3e0b69cace0b9 613 Gene3D G3DSA:3.60.20.10 2 184 1.9E-63 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal COP00_22555 8fc7cac8b89136d884e3e0b69cace0b9 613 SUPERFAMILY SSF52402 231 575 6.98E-75 T 13-10-2018 COP00_22555 8fc7cac8b89136d884e3e0b69cace0b9 613 SUPERFAMILY SSF56235 1 226 4.01E-67 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal COP00_22555 8fc7cac8b89136d884e3e0b69cace0b9 613 Pfam PF13537 Glutamine amidotransferase domain 48 169 4.8E-47 T 13-10-2018 IPR017932 Glutamine amidotransferase type 2 domain COP00_22555 8fc7cac8b89136d884e3e0b69cace0b9 613 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 532 4.1E-173 T 13-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 COP00_22555 8fc7cac8b89136d884e3e0b69cace0b9 613 PIRSF PIRSF001589 1 611 1.1E-144 T 13-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 COP00_22555 8fc7cac8b89136d884e3e0b69cace0b9 613 Pfam PF00733 Asparagine synthase 242 604 1.3E-97 T 13-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 COP00_01995 6ab858624af2217d7cbda43ac61b8cd9 2541 SUPERFAMILY SSF47336 1991 2063 4.84E-19 T 13-10-2018 IPR036736 ACP-like superfamily COP00_01995 6ab858624af2217d7cbda43ac61b8cd9 2541 Gene3D G3DSA:3.30.300.30 1887 1987 6.4E-33 T 13-10-2018 COP00_01995 6ab858624af2217d7cbda43ac61b8cd9 2541 Gene3D G3DSA:3.40.50.12780 1487 1886 6.0E-141 T 13-10-2018 COP00_01995 6ab858624af2217d7cbda43ac61b8cd9 2541 Gene3D G3DSA:3.40.50.12780 454 861 1.4E-131 T 13-10-2018 COP00_01995 6ab858624af2217d7cbda43ac61b8cd9 2541 SUPERFAMILY SSF56801 422 984 2.62E-152 T 13-10-2018 COP00_01995 6ab858624af2217d7cbda43ac61b8cd9 2541 Pfam PF00550 Phosphopantetheine attachment site 974 1037 9.1E-12 T 13-10-2018 IPR009081 Phosphopantetheine binding ACP domain COP00_01995 6ab858624af2217d7cbda43ac61b8cd9 2541 Pfam PF00550 Phosphopantetheine attachment site 2001 2059 1.8E-12 T 13-10-2018 IPR009081 Phosphopantetheine binding ACP domain COP00_01995 6ab858624af2217d7cbda43ac61b8cd9 2541 ProSitePatterns PS00455 Putative AMP-binding domain signature. 604 615 - T 13-10-2018 IPR020845 AMP-binding, conserved site COP00_01995 6ab858624af2217d7cbda43ac61b8cd9 2541 Gene3D G3DSA:3.30.300.30 863 961 2.8E-30 T 13-10-2018 COP00_01995 6ab858624af2217d7cbda43ac61b8cd9 2541 Pfam PF13193 AMP-binding enzyme C-terminal domain 877 946 4.3E-8 T 13-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain COP00_01995 6ab858624af2217d7cbda43ac61b8cd9 2541 Pfam PF13193 AMP-binding enzyme C-terminal domain 1900 1973 4.1E-9 T 13-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain COP00_01995 6ab858624af2217d7cbda43ac61b8cd9 2541 Gene3D G3DSA:3.30.559.30 1219 1465 7.5E-149 T 13-10-2018 COP00_01995 6ab858624af2217d7cbda43ac61b8cd9 2541 SUPERFAMILY SSF52777 2073 2249 2.0E-39 T 13-10-2018 COP00_01995 6ab858624af2217d7cbda43ac61b8cd9 2541 SUPERFAMILY SSF52777 8 181 1.45E-30 T 13-10-2018 COP00_01995 6ab858624af2217d7cbda43ac61b8cd9 2541 TIGRFAM TIGR01720 NRPS-para261: non-ribosomal peptide synthase domain TIGR01720 2382 2534 2.6E-48 T 13-10-2018 IPR010060 Non-ribosomal peptide synthase COP00_01995 6ab858624af2217d7cbda43ac61b8cd9 2541 Gene3D G3DSA:3.30.559.30 185 427 1.7E-79 T 13-10-2018 COP00_01995 6ab858624af2217d7cbda43ac61b8cd9 2541 SUPERFAMILY SSF52777 187 427 4.34E-38 T 13-10-2018 COP00_01995 6ab858624af2217d7cbda43ac61b8cd9 2541 SUPERFAMILY SSF52777 2264 2510 1.33E-30 T 13-10-2018 COP00_01995 6ab858624af2217d7cbda43ac61b8cd9 2541 Gene3D G3DSA:1.10.1200.10 1988 2066 4.1E-25 T 13-10-2018 IPR036736 ACP-like superfamily COP00_01995 6ab858624af2217d7cbda43ac61b8cd9 2541 Gene3D G3DSA:1.10.1200.10 962 1042 2.0E-24 T 13-10-2018 IPR036736 ACP-like superfamily COP00_01995 6ab858624af2217d7cbda43ac61b8cd9 2541 Pfam PF00668 Condensation domain 4 444 2.4E-110 T 13-10-2018 IPR001242 Condensation domain COP00_01995 6ab858624af2217d7cbda43ac61b8cd9 2541 Pfam PF00668 Condensation domain 2076 2526 1.8E-100 T 13-10-2018 IPR001242 Condensation domain COP00_01995 6ab858624af2217d7cbda43ac61b8cd9 2541 Pfam PF00668 Condensation domain 1053 1479 1.7E-133 T 13-10-2018 IPR001242 Condensation domain COP00_01995 6ab858624af2217d7cbda43ac61b8cd9 2541 Pfam PF00501 AMP-binding enzyme 1502 1892 5.2E-100 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 COP00_01995 6ab858624af2217d7cbda43ac61b8cd9 2541 Pfam PF00501 AMP-binding enzyme 464 869 2.2E-99 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 COP00_01995 6ab858624af2217d7cbda43ac61b8cd9 2541 SUPERFAMILY SSF52777 1051 1235 6.0E-43 T 13-10-2018 COP00_01995 6ab858624af2217d7cbda43ac61b8cd9 2541 SUPERFAMILY SSF52777 1222 1465 2.45E-62 T 13-10-2018 COP00_01995 6ab858624af2217d7cbda43ac61b8cd9 2541 SUPERFAMILY SSF47336 965 1037 9.5E-18 T 13-10-2018 IPR036736 ACP-like superfamily COP00_01995 6ab858624af2217d7cbda43ac61b8cd9 2541 ProSitePatterns PS00012 Phosphopantetheine attachment site. 2023 2038 - T 13-10-2018 IPR006162 Phosphopantetheine attachment site COP00_01995 6ab858624af2217d7cbda43ac61b8cd9 2541 Gene3D G3DSA:3.30.559.10 1058 1410 7.5E-149 T 13-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 COP00_01995 6ab858624af2217d7cbda43ac61b8cd9 2541 Gene3D G3DSA:3.30.559.30 2245 2516 7.5E-64 T 13-10-2018 COP00_01995 6ab858624af2217d7cbda43ac61b8cd9 2541 Gene3D G3DSA:3.30.559.10 2067 2244 1.1E-61 T 13-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 COP00_01995 6ab858624af2217d7cbda43ac61b8cd9 2541 SUPERFAMILY SSF56801 1460 2012 2.88E-158 T 13-10-2018 COP00_01995 6ab858624af2217d7cbda43ac61b8cd9 2541 ProSitePatterns PS00455 Putative AMP-binding domain signature. 1640 1651 - T 13-10-2018 IPR020845 AMP-binding, conserved site COP00_01995 6ab858624af2217d7cbda43ac61b8cd9 2541 Gene3D G3DSA:3.30.559.10 8 371 1.7E-79 T 13-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 COP00_01995 6ab858624af2217d7cbda43ac61b8cd9 2541 SMART SM00823 Phosphopantetheine attachment site 1999 2067 1.5E-5 T 13-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 COP00_01995 6ab858624af2217d7cbda43ac61b8cd9 2541 SMART SM00823 Phosphopantetheine attachment site 972 1041 0.0029 T 13-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 COP00_01995 6ab858624af2217d7cbda43ac61b8cd9 2541 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 1523 1916 8.0E-134 T 13-10-2018 IPR010071 Amino acid adenylation domain COP00_01995 6ab858624af2217d7cbda43ac61b8cd9 2541 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 485 893 2.4E-133 T 13-10-2018 IPR010071 Amino acid adenylation domain COP00_06030 d3ddd52b1bbb0b884a4858dc1e690e72 440 Gene3D G3DSA:2.40.37.10 17 427 1.8E-161 T 13-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 COP00_06030 d3ddd52b1bbb0b884a4858dc1e690e72 440 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 39 296 2.4E-73 T 13-10-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 COP00_06030 d3ddd52b1bbb0b884a4858dc1e690e72 440 SUPERFAMILY SSF51419 30 299 8.43E-83 T 13-10-2018 IPR029066 PLP-binding barrel COP00_06030 d3ddd52b1bbb0b884a4858dc1e690e72 440 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 19 431 42.124 T 13-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 COP00_06030 d3ddd52b1bbb0b884a4858dc1e690e72 440 Gene3D G3DSA:3.20.20.10 38 297 1.8E-161 T 13-10-2018 IPR029066 PLP-binding barrel COP00_06030 d3ddd52b1bbb0b884a4858dc1e690e72 440 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 8 430 4.2E-163 T 13-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 COP00_06030 d3ddd52b1bbb0b884a4858dc1e690e72 440 PRINTS PR01181 Diaminopimelate decarboxylase signature 398 420 3.3E-31 T 13-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 COP00_06030 d3ddd52b1bbb0b884a4858dc1e690e72 440 PRINTS PR01181 Diaminopimelate decarboxylase signature 81 98 3.3E-31 T 13-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 COP00_06030 d3ddd52b1bbb0b884a4858dc1e690e72 440 PRINTS PR01181 Diaminopimelate decarboxylase signature 170 179 3.3E-31 T 13-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 COP00_06030 d3ddd52b1bbb0b884a4858dc1e690e72 440 PRINTS PR01181 Diaminopimelate decarboxylase signature 316 334 3.3E-31 T 13-10-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 COP00_06030 d3ddd52b1bbb0b884a4858dc1e690e72 440 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 63 81 - T 13-10-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site COP00_06030 d3ddd52b1bbb0b884a4858dc1e690e72 440 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 235 250 - T 13-10-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site COP00_06030 d3ddd52b1bbb0b884a4858dc1e690e72 440 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 33 388 4.3E-17 T 13-10-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 COP00_06030 d3ddd52b1bbb0b884a4858dc1e690e72 440 SUPERFAMILY SSF50621 271 431 1.97E-54 T 13-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 COP00_06030 d3ddd52b1bbb0b884a4858dc1e690e72 440 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 388 401 1.0E-17 T 13-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 COP00_06030 d3ddd52b1bbb0b884a4858dc1e690e72 440 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 198 211 1.0E-17 T 13-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 COP00_06030 d3ddd52b1bbb0b884a4858dc1e690e72 440 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 83 95 1.0E-17 T 13-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 COP00_06030 d3ddd52b1bbb0b884a4858dc1e690e72 440 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 63 81 1.0E-17 T 13-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 COP00_06030 d3ddd52b1bbb0b884a4858dc1e690e72 440 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 287 306 1.0E-17 T 13-10-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 COP00_08475 14fc682a3e6a23093d3604171465eae7 336 Gene3D G3DSA:3.30.420.40 151 314 2.5E-131 T 13-10-2018 COP00_08475 14fc682a3e6a23093d3604171465eae7 336 SUPERFAMILY SSF53067 8 144 4.99E-38 T 13-10-2018 COP00_08475 14fc682a3e6a23093d3604171465eae7 336 Gene3D G3DSA:3.30.420.40 9 324 2.5E-131 T 13-10-2018 COP00_08475 14fc682a3e6a23093d3604171465eae7 336 Pfam PF06723 MreB/Mbl protein 7 331 2.1E-151 T 13-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 COP00_08475 14fc682a3e6a23093d3604171465eae7 336 SUPERFAMILY SSF53067 147 329 1.11E-50 T 13-10-2018 COP00_08475 14fc682a3e6a23093d3604171465eae7 336 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 6 333 9.0E-161 T 13-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 COP00_08475 14fc682a3e6a23093d3604171465eae7 336 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 64 87 4.8E-61 T 13-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 COP00_08475 14fc682a3e6a23093d3604171465eae7 336 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 184 204 4.8E-61 T 13-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 COP00_08475 14fc682a3e6a23093d3604171465eae7 336 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 297 323 4.8E-61 T 13-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 COP00_08475 14fc682a3e6a23093d3604171465eae7 336 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 44 62 4.8E-61 T 13-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 COP00_08475 14fc682a3e6a23093d3604171465eae7 336 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 129 148 4.8E-61 T 13-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 COP00_08475 14fc682a3e6a23093d3604171465eae7 336 Gene3D G3DSA:3.90.640.10 183 256 2.5E-131 T 13-10-2018 COP00_09735 9804020cdb403569f5680319276f7128 400 PIRSF PIRSF000497 1 398 6.6E-182 T 13-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 COP00_09735 9804020cdb403569f5680319276f7128 400 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 273 281 - T 13-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 COP00_09735 9804020cdb403569f5680319276f7128 400 Pfam PF02772 S-adenosylmethionine synthetase, central domain 128 245 1.4E-50 T 13-10-2018 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 COP00_09735 9804020cdb403569f5680319276f7128 400 Gene3D G3DSA:3.30.300.10 7 247 6.1E-184 T 13-10-2018 COP00_09735 9804020cdb403569f5680319276f7128 400 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 129 139 - T 13-10-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 COP00_09735 9804020cdb403569f5680319276f7128 400 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 4 397 61.07 T 13-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 COP00_09735 9804020cdb403569f5680319276f7128 400 SUPERFAMILY SSF55973 247 395 6.67E-71 T 13-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 COP00_09735 9804020cdb403569f5680319276f7128 400 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 6 103 1.4E-44 T 13-10-2018 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 COP00_09735 9804020cdb403569f5680319276f7128 400 Gene3D G3DSA:3.30.300.10 104 389 6.1E-184 T 13-10-2018 COP00_09735 9804020cdb403569f5680319276f7128 400 SUPERFAMILY SSF55973 5 111 3.81E-48 T 13-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 COP00_09735 9804020cdb403569f5680319276f7128 400 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 247 386 5.5E-71 T 13-10-2018 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 COP00_09735 9804020cdb403569f5680319276f7128 400 Gene3D G3DSA:3.30.300.10 13 284 6.1E-184 T 13-10-2018 COP00_09735 9804020cdb403569f5680319276f7128 400 SUPERFAMILY SSF55973 125 246 1.26E-53 T 13-10-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 COP00_09735 9804020cdb403569f5680319276f7128 400 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 7 395 2.4E-191 T 13-10-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 COP00_08595 9d11664fc029741f093387e9634cf4ec 199 SUPERFAMILY SSF52016 1 196 6.87E-58 T 13-10-2018 COP00_08595 9d11664fc029741f093387e9634cf4ec 199 Gene3D G3DSA:3.20.19.10 1 174 2.0E-74 T 13-10-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel KEGG: 00290+4.2.1.33 COP00_08595 9d11664fc029741f093387e9634cf4ec 199 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 1 197 42.377 T 13-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 COP00_08595 9d11664fc029741f093387e9634cf4ec 199 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 1 186 2.9E-93 T 13-10-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 COP00_08595 9d11664fc029741f093387e9634cf4ec 199 Pfam PF00694 Aconitase C-terminal domain 1 122 1.4E-33 T 13-10-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain KEGG: 00290+4.2.1.33 COP00_15110 534ed4d2a38e0fe7e98a86564a998a95 529 SUPERFAMILY SSF51645 5 528 8.24E-199 T 13-10-2018 IPR011076 Malate synthase-like superfamily GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 COP00_15110 534ed4d2a38e0fe7e98a86564a998a95 529 TIGRFAM TIGR01344 malate_syn_A: malate synthase A 21 529 1.6E-248 T 13-10-2018 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 COP00_15110 534ed4d2a38e0fe7e98a86564a998a95 529 Pfam PF01274 Malate synthase 9 529 1.2E-211 T 13-10-2018 IPR001465 Malate synthase GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 COP00_15110 534ed4d2a38e0fe7e98a86564a998a95 529 PIRSF PIRSF001363 1 529 2.2E-261 T 13-10-2018 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 COP00_15110 534ed4d2a38e0fe7e98a86564a998a95 529 ProSitePatterns PS00510 Malate synthase signature. 263 278 - T 13-10-2018 IPR019830 Malate synthase, conserved site GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 COP00_15110 534ed4d2a38e0fe7e98a86564a998a95 529 Gene3D G3DSA:1.20.1220.12 408 529 4.1E-47 T 13-10-2018 COP00_15110 534ed4d2a38e0fe7e98a86564a998a95 529 Gene3D G3DSA:3.20.20.360 2 407 1.6E-198 T 13-10-2018 COP00_04460 9b40a8677362d156758a6ced414b12ce 660 Gene3D G3DSA:1.10.8.500 303 354 4.0E-9 T 13-10-2018 COP00_04460 9b40a8677362d156758a6ced414b12ce 660 Gene3D G3DSA:3.30.450.20 59 271 1.5E-31 T 13-10-2018 COP00_04460 9b40a8677362d156758a6ced414b12ce 660 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 511 540 2.6E-24 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 COP00_04460 9b40a8677362d156758a6ced414b12ce 660 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 405 434 2.6E-24 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 COP00_04460 9b40a8677362d156758a6ced414b12ce 660 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 482 509 2.6E-24 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 COP00_04460 9b40a8677362d156758a6ced414b12ce 660 SUPERFAMILY SSF58104 323 659 1.31E-75 T 13-10-2018 COP00_04460 9b40a8677362d156758a6ced414b12ce 660 Pfam PF00672 HAMP domain 303 351 6.0E-16 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 COP00_04460 9b40a8677362d156758a6ced414b12ce 660 SMART SM00304 303 355 2.0E-18 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 COP00_04460 9b40a8677362d156758a6ced414b12ce 660 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 428 612 3.1E-56 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 COP00_04460 9b40a8677362d156758a6ced414b12ce 660 SMART SM00283 384 659 5.6E-88 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 COP00_04460 9b40a8677362d156758a6ced414b12ce 660 SMART SM00319 33 151 9.5E-15 T 13-10-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 COP00_04460 9b40a8677362d156758a6ced414b12ce 660 Pfam PF02743 Cache domain 50 265 4.5E-25 T 13-10-2018 IPR033479 Double Cache domain 1 COP00_04460 9b40a8677362d156758a6ced414b12ce 660 Gene3D G3DSA:3.30.450.20 72 183 1.5E-31 T 13-10-2018 COP00_04460 9b40a8677362d156758a6ced414b12ce 660 Gene3D G3DSA:1.10.287.950 355 659 1.8E-72 T 13-10-2018 COP00_04460 9b40a8677362d156758a6ced414b12ce 660 SUPERFAMILY SSF103190 127 190 1.49E-7 T 13-10-2018 IPR029151 Periplasmic sensor-like domain superfamily COP00_20125 924671510466e68d34ffa4a21136eb69 276 Gene3D G3DSA:1.10.10.60 45 99 4.5E-17 T 13-10-2018 COP00_20125 924671510466e68d34ffa4a21136eb69 276 Gene3D G3DSA:3.20.80.10 120 276 8.7E-34 T 13-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily COP00_20125 924671510466e68d34ffa4a21136eb69 276 SUPERFAMILY SSF55136 117 275 1.01E-25 T 13-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily COP00_20125 924671510466e68d34ffa4a21136eb69 276 Pfam PF12833 Helix-turn-helix domain 14 92 6.7E-22 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 COP00_20125 924671510466e68d34ffa4a21136eb69 276 Pfam PF14526 Integron-associated effector binding protein 123 275 2.8E-29 T 13-10-2018 IPR029441 Integron-associated effector binding protein COP00_20125 924671510466e68d34ffa4a21136eb69 276 SMART SM00342 8 91 2.2E-29 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 COP00_20125 924671510466e68d34ffa4a21136eb69 276 SUPERFAMILY SSF46689 1 42 2.46E-7 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 COP00_20125 924671510466e68d34ffa4a21136eb69 276 SUPERFAMILY SSF46689 44 96 1.39E-12 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 COP00_20125 924671510466e68d34ffa4a21136eb69 276 Gene3D G3DSA:1.10.10.60 1 44 3.5E-14 T 13-10-2018 COP00_20125 924671510466e68d34ffa4a21136eb69 276 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 45 87 - T 13-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 COP00_20125 924671510466e68d34ffa4a21136eb69 276 SMART SM00871 119 276 4.8E-26 T 13-10-2018 IPR010499 Bacterial transcription activator, effector binding COP00_15950 afeba393da579ee5c2488b74fd06317d 370 Gene3D G3DSA:1.20.1050.90 119 311 5.1E-111 T 13-10-2018 COP00_15950 afeba393da579ee5c2488b74fd06317d 370 Pfam PF02463 RecF/RecN/SMC N terminal domain 2 346 2.2E-18 T 13-10-2018 IPR003395 RecF/RecN/SMC, N-terminal COP00_15950 afeba393da579ee5c2488b74fd06317d 370 ProSitePatterns PS00617 RecF protein signature 1. 116 136 - T 13-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 COP00_15950 afeba393da579ee5c2488b74fd06317d 370 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 1 365 1.5E-140 T 13-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 COP00_15950 afeba393da579ee5c2488b74fd06317d 370 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 370 105.243 T 13-10-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 COP00_15950 afeba393da579ee5c2488b74fd06317d 370 SUPERFAMILY SSF52540 2 350 1.61E-44 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_15950 afeba393da579ee5c2488b74fd06317d 370 ProSitePatterns PS00618 RecF protein signature 2. 312 330 - T 13-10-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 COP00_15950 afeba393da579ee5c2488b74fd06317d 370 Gene3D G3DSA:3.40.50.300 6 345 5.1E-111 T 13-10-2018 COP00_23825 aecb8f3bb9acca66f31b4818c2779fdb 504 Pfam PF01547 Bacterial extracellular solute-binding protein 60 364 6.1E-27 T 13-10-2018 IPR006059 Bacterial extracellular solute-binding protein COP00_23825 aecb8f3bb9acca66f31b4818c2779fdb 504 Gene3D G3DSA:3.40.190.10 57 155 5.4E-14 T 13-10-2018 COP00_23825 aecb8f3bb9acca66f31b4818c2779fdb 504 SUPERFAMILY SSF53850 20 502 2.23E-90 T 13-10-2018 COP00_23825 aecb8f3bb9acca66f31b4818c2779fdb 504 Gene3D G3DSA:3.40.190.10 156 393 5.7E-47 T 13-10-2018 COP00_20475 8c5c9fbd019b4747daa11f3707992862 541 SUPERFAMILY SSF53223 3 259 5.32E-93 T 13-10-2018 COP00_20475 8c5c9fbd019b4747daa11f3707992862 541 Pfam PF00390 Malic enzyme, N-terminal domain 70 250 1.1E-66 T 13-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 COP00_20475 8c5c9fbd019b4747daa11f3707992862 541 Gene3D G3DSA:3.40.50.720 258 541 1.2E-98 T 13-10-2018 COP00_20475 8c5c9fbd019b4747daa11f3707992862 541 Pfam PF03949 Malic enzyme, NAD binding domain 260 516 2.0E-95 T 13-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 COP00_20475 8c5c9fbd019b4747daa11f3707992862 541 SMART SM01274 69 250 7.7E-85 T 13-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 COP00_20475 8c5c9fbd019b4747daa11f3707992862 541 Gene3D G3DSA:3.40.50.10380 4 257 2.0E-95 T 13-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 COP00_20475 8c5c9fbd019b4747daa11f3707992862 541 PRINTS PR00072 Malic enzyme signature 172 194 4.1E-65 T 13-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 COP00_20475 8c5c9fbd019b4747daa11f3707992862 541 PRINTS PR00072 Malic enzyme signature 136 165 4.1E-65 T 13-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 COP00_20475 8c5c9fbd019b4747daa11f3707992862 541 PRINTS PR00072 Malic enzyme signature 394 410 4.1E-65 T 13-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 COP00_20475 8c5c9fbd019b4747daa11f3707992862 541 PRINTS PR00072 Malic enzyme signature 231 249 4.1E-65 T 13-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 COP00_20475 8c5c9fbd019b4747daa11f3707992862 541 PRINTS PR00072 Malic enzyme signature 256 272 4.1E-65 T 13-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 COP00_20475 8c5c9fbd019b4747daa11f3707992862 541 PRINTS PR00072 Malic enzyme signature 287 303 4.1E-65 T 13-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 COP00_20475 8c5c9fbd019b4747daa11f3707992862 541 PRINTS PR00072 Malic enzyme signature 75 99 4.1E-65 T 13-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 COP00_20475 8c5c9fbd019b4747daa11f3707992862 541 PIRSF PIRSF000106 1 541 1.5E-208 T 13-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 COP00_20475 8c5c9fbd019b4747daa11f3707992862 541 SMART SM00919 260 516 7.9E-111 T 13-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 COP00_20475 8c5c9fbd019b4747daa11f3707992862 541 SUPERFAMILY SSF51735 260 541 2.17E-84 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily COP00_11995 c5bff3436ae87fc45f1b7a797cc5f5f1 335 PIRSF PIRSF000149 1 334 2.9E-143 T 13-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 COP00_11995 c5bff3436ae87fc45f1b7a797cc5f5f1 335 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 102 4.1E-41 T 13-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 COP00_11995 c5bff3436ae87fc45f1b7a797cc5f5f1 335 Gene3D G3DSA:3.40.50.720 4 329 2.7E-161 T 13-10-2018 COP00_11995 c5bff3436ae87fc45f1b7a797cc5f5f1 335 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 325 8.9E-141 T 13-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 COP00_11995 c5bff3436ae87fc45f1b7a797cc5f5f1 335 SUPERFAMILY SSF55347 152 314 1.19E-73 T 13-10-2018 COP00_11995 c5bff3436ae87fc45f1b7a797cc5f5f1 335 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 150 157 - T 13-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 COP00_11995 c5bff3436ae87fc45f1b7a797cc5f5f1 335 SMART SM00846 3 152 2.9E-101 T 13-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 COP00_11995 c5bff3436ae87fc45f1b7a797cc5f5f1 335 SUPERFAMILY SSF51735 3 168 9.89E-69 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily COP00_11995 c5bff3436ae87fc45f1b7a797cc5f5f1 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 269 284 8.3E-42 T 13-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 COP00_11995 c5bff3436ae87fc45f1b7a797cc5f5f1 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 173 189 8.3E-42 T 13-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 COP00_11995 c5bff3436ae87fc45f1b7a797cc5f5f1 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 146 164 8.3E-42 T 13-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 COP00_11995 c5bff3436ae87fc45f1b7a797cc5f5f1 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 229 246 8.3E-42 T 13-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 COP00_11995 c5bff3436ae87fc45f1b7a797cc5f5f1 335 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 109 122 8.3E-42 T 13-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 COP00_11995 c5bff3436ae87fc45f1b7a797cc5f5f1 335 Gene3D G3DSA:3.30.360.10 151 315 2.7E-161 T 13-10-2018 COP00_11995 c5bff3436ae87fc45f1b7a797cc5f5f1 335 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 157 313 6.1E-72 T 13-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 COP00_23085 75938502f0ef369a04da3c296f2467c2 169 Hamap MF_01444 Putative phosphoesterase . 1 168 39.808 T 13-10-2018 IPR022932 Putative phosphoesterase YjcG COP00_23085 75938502f0ef369a04da3c296f2467c2 169 SUPERFAMILY SSF55144 1 167 5.58E-35 T 13-10-2018 IPR009097 Cyclic phosphodiesterase COP00_23085 75938502f0ef369a04da3c296f2467c2 169 Gene3D G3DSA:3.90.1140.10 1 169 2.9E-43 T 13-10-2018 COP00_23085 75938502f0ef369a04da3c296f2467c2 169 Pfam PF13563 2'-5' RNA ligase superfamily 11 153 5.4E-23 T 13-10-2018 COP00_06390 a5772fc72fd02cc9a8f7a296a713b781 237 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 40 56 1.6E-6 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 COP00_06390 a5772fc72fd02cc9a8f7a296a713b781 237 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 26 40 1.6E-6 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 COP00_06390 a5772fc72fd02cc9a8f7a296a713b781 237 Pfam PF07702 UTRA domain 92 228 2.1E-32 T 13-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 COP00_06390 a5772fc72fd02cc9a8f7a296a713b781 237 Gene3D G3DSA:3.40.1410.10 82 231 1.4E-36 T 13-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily COP00_06390 a5772fc72fd02cc9a8f7a296a713b781 237 SMART SM00345 7 66 4.7E-7 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 COP00_06390 a5772fc72fd02cc9a8f7a296a713b781 237 SUPERFAMILY SSF64288 82 231 2.83E-40 T 13-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily COP00_06390 a5772fc72fd02cc9a8f7a296a713b781 237 SMART SM00866 90 229 1.7E-35 T 13-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 COP00_06390 a5772fc72fd02cc9a8f7a296a713b781 237 Pfam PF00392 Bacterial regulatory proteins, gntR family 4 66 3.3E-13 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 COP00_06390 a5772fc72fd02cc9a8f7a296a713b781 237 Gene3D G3DSA:1.10.10.10 2 70 5.0E-20 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_06390 a5772fc72fd02cc9a8f7a296a713b781 237 SUPERFAMILY SSF46785 2 74 1.47E-17 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_09880 6ad708ad6845d1bb7c9f00b337cd026b 437 Gene3D G3DSA:3.20.20.30 1 437 4.5E-171 T 13-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 COP00_09880 6ad708ad6845d1bb7c9f00b337cd026b 437 Pfam PF00296 Luciferase-like monooxygenase 15 378 1.3E-79 T 13-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 COP00_09880 6ad708ad6845d1bb7c9f00b337cd026b 437 PIRSF PIRSF000337 1 437 9.5E-167 T 13-10-2018 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 COP00_09880 6ad708ad6845d1bb7c9f00b337cd026b 437 SUPERFAMILY SSF51679 2 431 1.1E-143 T 13-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 COP00_09880 6ad708ad6845d1bb7c9f00b337cd026b 437 TIGRFAM TIGR03860 FMN_nitrolo: FMN-dependent oxidoreductase, nitrilotriacetate monooxygenase family 6 425 1.8E-187 T 13-10-2018 IPR016215 Nitrilotriacetate monooxygenase component A/pristinamycin IIA synthase subunit A GO:0004497 COP00_14215 4226e1158243eda7452324a61289d14d 231 Gene3D G3DSA:3.40.470.10 1 224 4.7E-103 T 13-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 COP00_14215 4226e1158243eda7452324a61289d14d 231 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 7 214 3.6E-86 T 13-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 COP00_14215 4226e1158243eda7452324a61289d14d 231 SMART SM00987 50 210 1.8E-37 T 13-10-2018 COP00_14215 4226e1158243eda7452324a61289d14d 231 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 58 67 - T 13-10-2018 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 COP00_14215 4226e1158243eda7452324a61289d14d 231 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 6 221 41.691 T 13-10-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 COP00_14215 4226e1158243eda7452324a61289d14d 231 SMART SM00986 50 210 1.8E-37 T 13-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 COP00_14215 4226e1158243eda7452324a61289d14d 231 Pfam PF03167 Uracil DNA glycosylase superfamily 52 209 4.6E-27 T 13-10-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 COP00_14215 4226e1158243eda7452324a61289d14d 231 SUPERFAMILY SSF52141 4 222 3.92E-95 T 13-10-2018 IPR036895 Uracil-DNA glycosylase-like domain superfamily Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 COP00_02700 8bfd4a5dbca6a66f522c1353ad8144fd 366 Gene3D G3DSA:1.10.150.130 35 131 1.4E-11 T 13-10-2018 IPR010998 Integrase/recombinase, N-terminal COP00_02700 8bfd4a5dbca6a66f522c1353ad8144fd 366 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 47 120 3.0E-8 T 13-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 COP00_02700 8bfd4a5dbca6a66f522c1353ad8144fd 366 SUPERFAMILY SSF56349 43 312 2.94E-22 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 COP00_02700 8bfd4a5dbca6a66f522c1353ad8144fd 366 Pfam PF00589 Phage integrase family 165 315 1.6E-5 T 13-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 COP00_02700 8bfd4a5dbca6a66f522c1353ad8144fd 366 Gene3D G3DSA:1.10.443.10 151 327 6.6E-14 T 13-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 COP00_12265 aae0494f3f5125ede73028deb1df58d8 357 SMART SM00028 123 156 67.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 COP00_12265 aae0494f3f5125ede73028deb1df58d8 357 SMART SM00028 164 197 190.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 COP00_12265 aae0494f3f5125ede73028deb1df58d8 357 SMART SM00028 204 237 0.97 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 COP00_12265 aae0494f3f5125ede73028deb1df58d8 357 SMART SM00028 317 350 3.9 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 COP00_12265 aae0494f3f5125ede73028deb1df58d8 357 SMART SM00028 243 276 81.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 COP00_12265 aae0494f3f5125ede73028deb1df58d8 357 Gene3D G3DSA:1.25.40.10 1 354 1.4E-97 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 COP00_12265 aae0494f3f5125ede73028deb1df58d8 357 SUPERFAMILY SSF48452 71 308 9.29E-17 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 COP00_12265 aae0494f3f5125ede73028deb1df58d8 357 Pfam PF13424 Tetratricopeptide repeat 208 273 4.3E-8 T 13-10-2018 COP00_12265 aae0494f3f5125ede73028deb1df58d8 357 Pfam PF13181 Tetratricopeptide repeat 321 347 0.022 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 COP00_07545 df22a46feee34cf4a536c5792b37c939 165 Gene3D G3DSA:3.40.1580.10 2 148 1.4E-8 T 13-10-2018 IPR037883 Knr4/Smi1-like domain superfamily COP00_07545 df22a46feee34cf4a536c5792b37c939 165 SUPERFAMILY SSF160631 1 153 1.31E-23 T 13-10-2018 COP00_07545 df22a46feee34cf4a536c5792b37c939 165 Pfam PF09346 SMI1 / KNR4 family (SUKH-1) 35 137 2.1E-7 T 13-10-2018 IPR018958 Knr4/Smi1-like domain COP00_14385 21befe1c03c4355b3ef36e737c546547 512 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 33 434 2.1E-95 T 13-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 COP00_14385 21befe1c03c4355b3ef36e737c546547 512 Gene3D G3DSA:1.20.1730.10 20 463 1.8E-66 T 13-10-2018 IPR038377 Sodium/glucose symporter superfamily COP00_14385 21befe1c03c4355b3ef36e737c546547 512 Pfam PF00474 Sodium:solute symporter family 33 434 1.9E-131 T 13-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 COP00_14385 21befe1c03c4355b3ef36e737c546547 512 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 416 436 - T 13-10-2018 IPR018212 Sodium/solute symporter, conserved site COP00_24120 d40b3899f18d2c2ae355ad4f47813d37 356 Pfam PF01008 Initiation factor 2 subunit family 49 336 1.5E-96 T 13-10-2018 IPR000649 Initiation factor 2B-related GO:0044237 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174 COP00_24120 d40b3899f18d2c2ae355ad4f47813d37 356 Gene3D G3DSA:3.40.50.10470 149 353 2.0E-72 T 13-10-2018 COP00_24120 d40b3899f18d2c2ae355ad4f47813d37 356 TIGRFAM TIGR00512 salvage_mtnA: S-methyl-5-thioribose-1-phosphate isomerase 9 336 2.5E-141 T 13-10-2018 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 COP00_24120 d40b3899f18d2c2ae355ad4f47813d37 356 SUPERFAMILY SSF100950 6 337 1.76E-118 T 13-10-2018 IPR037171 NagB/RpiA transferase-like COP00_24120 d40b3899f18d2c2ae355ad4f47813d37 356 Gene3D G3DSA:1.20.120.420 1 148 4.1E-53 T 13-10-2018 IPR027363 Methylthioribose-1-phosphate isomerase, N-terminal KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 COP00_24120 d40b3899f18d2c2ae355ad4f47813d37 356 TIGRFAM TIGR00524 eIF-2B_rel: eIF-2B alpha/beta/delta-related uncharacterized proteins 36 336 6.0E-137 T 13-10-2018 IPR011559 Initiation factor 2B alpha/beta/delta GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 COP00_24120 d40b3899f18d2c2ae355ad4f47813d37 356 Hamap MF_01678 Putative methylthioribose-1-phosphate isomerase [mtnA]. 7 347 39.102 T 13-10-2018 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 COP00_03895 8c0128cba3ee04ade1c9265e2f816ff9 210 SUPERFAMILY SSF52317 4 178 4.22E-30 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like COP00_03895 8c0128cba3ee04ade1c9265e2f816ff9 210 Gene3D G3DSA:3.40.50.880 1 210 5.2E-53 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like COP00_03895 8c0128cba3ee04ade1c9265e2f816ff9 210 Pfam PF01965 DJ-1/PfpI family 4 176 2.5E-34 T 13-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 COP00_07615 7b3a539073998177f440a62e31fe8f09 399 SUPERFAMILY SSF51905 121 261 1.26E-25 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily COP00_07615 7b3a539073998177f440a62e31fe8f09 399 Gene3D G3DSA:3.50.50.60 123 261 5.6E-100 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily COP00_07615 7b3a539073998177f440a62e31fe8f09 399 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 129 3.6E-9 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 COP00_07615 7b3a539073998177f440a62e31fe8f09 399 Gene3D G3DSA:3.50.50.60 9 325 5.6E-100 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily COP00_07615 7b3a539073998177f440a62e31fe8f09 399 SUPERFAMILY SSF51905 6 329 1.24E-25 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily COP00_05425 4b8e4a58e56bc911eec163f3ce326936 168 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 20 140 2.3E-46 T 13-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 COP00_05425 4b8e4a58e56bc911eec163f3ce326936 168 SUPERFAMILY SSF51261 12 162 6.8E-57 T 13-10-2018 IPR011055 Duplicated hybrid motif COP00_05425 4b8e4a58e56bc911eec163f3ce326936 168 Gene3D G3DSA:2.70.70.10 8 167 3.9E-62 T 13-10-2018 IPR011055 Duplicated hybrid motif COP00_05425 4b8e4a58e56bc911eec163f3ce326936 168 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 82 94 - T 13-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 COP00_05425 4b8e4a58e56bc911eec163f3ce326936 168 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 19 142 5.2E-54 T 13-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 COP00_09410 6d79175e6928e6f71ddb5b853c543de1 106 Gene3D G3DSA:3.40.30.10 1 105 1.6E-24 T 13-10-2018 COP00_09410 6d79175e6928e6f71ddb5b853c543de1 106 SUPERFAMILY SSF52833 2 102 3.72E-28 T 13-10-2018 IPR036249 Thioredoxin-like superfamily COP00_09410 6d79175e6928e6f71ddb5b853c543de1 106 Pfam PF00085 Thioredoxin 7 101 6.5E-18 T 13-10-2018 IPR013766 Thioredoxin domain GO:0045454 COP00_18665 476822d6440b4841be49ae2d9fe65971 545 Gene3D G3DSA:2.60.40.1220 28 129 1.0E-26 T 13-10-2018 COP00_18665 476822d6440b4841be49ae2d9fe65971 545 SUPERFAMILY SSF81296 27 125 4.27E-22 T 13-10-2018 IPR014756 Immunoglobulin E-set COP00_18665 476822d6440b4841be49ae2d9fe65971 545 Pfam PF05425 Copper resistance protein D 326 418 1.8E-17 T 13-10-2018 IPR008457 Copper resistance protein D GO:0016021 COP00_18665 476822d6440b4841be49ae2d9fe65971 545 Pfam PF04234 CopC domain 28 124 9.9E-21 T 13-10-2018 IPR007348 CopC domain GO:0005507|GO:0042597|GO:0046688 COP00_07680 123378db8a3b59b01f471ef4391e48ac 253 SMART SM00849 6 215 0.0025 T 13-10-2018 IPR001279 Metallo-beta-lactamase COP00_07680 123378db8a3b59b01f471ef4391e48ac 253 Pfam PF12706 Beta-lactamase superfamily domain 20 216 2.0E-10 T 13-10-2018 IPR001279 Metallo-beta-lactamase COP00_07680 123378db8a3b59b01f471ef4391e48ac 253 Gene3D G3DSA:3.60.15.10 1 252 3.5E-66 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like COP00_07680 123378db8a3b59b01f471ef4391e48ac 253 SUPERFAMILY SSF56281 6 253 2.3E-19 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like COP00_14490 1100327aebaea3670816af97d1258eca 258 Gene3D G3DSA:3.30.450.40 74 250 1.0E-55 T 13-10-2018 IPR029016 GAF-like domain superfamily COP00_14490 1100327aebaea3670816af97d1258eca 258 Pfam PF09339 IclR helix-turn-helix domain 5 55 1.1E-14 T 13-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 COP00_14490 1100327aebaea3670816af97d1258eca 258 Gene3D G3DSA:1.10.10.10 1 73 2.0E-20 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_14490 1100327aebaea3670816af97d1258eca 258 SUPERFAMILY SSF55781 68 246 9.16E-51 T 13-10-2018 COP00_14490 1100327aebaea3670816af97d1258eca 258 Pfam PF01614 Bacterial transcriptional regulator 121 242 4.0E-33 T 13-10-2018 IPR014757 Transcription regulator IclR, C-terminal COP00_14490 1100327aebaea3670816af97d1258eca 258 SUPERFAMILY SSF46785 3 76 2.3E-17 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_14490 1100327aebaea3670816af97d1258eca 258 SMART SM00346 3 92 7.8E-19 T 13-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 COP00_16295 10501ba983f88d9db20e3f447ed34a15 1177 Pfam PF00270 DEAD/DEAH box helicase 625 784 2.5E-17 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 COP00_16295 10501ba983f88d9db20e3f447ed34a15 1177 SUPERFAMILY SSF141259 491 568 8.24E-27 T 13-10-2018 IPR036101 CarD-like/TRCF domain superfamily COP00_16295 10501ba983f88d9db20e3f447ed34a15 1177 SUPERFAMILY SSF52540 14 367 7.26E-92 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_16295 10501ba983f88d9db20e3f447ed34a15 1177 SMART SM01058 499 596 7.3E-52 T 13-10-2018 IPR003711 CarD-like/TRCF domain COP00_16295 10501ba983f88d9db20e3f447ed34a15 1177 Gene3D G3DSA:3.90.1150.50 1020 1177 5.7E-45 T 13-10-2018 IPR037235 TRCF-like, C-terminal domain COP00_16295 10501ba983f88d9db20e3f447ed34a15 1177 Pfam PF02559 CarD-like/TRCF domain 500 595 2.1E-32 T 13-10-2018 IPR003711 CarD-like/TRCF domain COP00_16295 10501ba983f88d9db20e3f447ed34a15 1177 Gene3D G3DSA:3.40.50.11180 35 326 5.4E-69 T 13-10-2018 COP00_16295 10501ba983f88d9db20e3f447ed34a15 1177 Gene3D G3DSA:3.40.50.300 562 801 1.4E-247 T 13-10-2018 COP00_16295 10501ba983f88d9db20e3f447ed34a15 1177 Gene3D G3DSA:2.30.30.840 503 561 1.4E-247 T 13-10-2018 COP00_16295 10501ba983f88d9db20e3f447ed34a15 1177 SMART SM00982 1024 1124 1.6E-35 T 13-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 COP00_16295 10501ba983f88d9db20e3f447ed34a15 1177 Gene3D G3DSA:3.30.2060.10 140 225 5.4E-69 T 13-10-2018 COP00_16295 10501ba983f88d9db20e3f447ed34a15 1177 Pfam PF00271 Helicase conserved C-terminal domain 828 929 2.7E-17 T 13-10-2018 IPR001650 Helicase, C-terminal COP00_16295 10501ba983f88d9db20e3f447ed34a15 1177 SUPERFAMILY SSF52540 377 490 2.95E-26 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_16295 10501ba983f88d9db20e3f447ed34a15 1177 SMART SM00490 846 930 9.9E-20 T 13-10-2018 IPR001650 Helicase, C-terminal COP00_16295 10501ba983f88d9db20e3f447ed34a15 1177 SUPERFAMILY SSF143517 1011 1168 5.1E-37 T 13-10-2018 IPR037235 TRCF-like, C-terminal domain COP00_16295 10501ba983f88d9db20e3f447ed34a15 1177 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 157 1098 0.0 T 13-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 COP00_16295 10501ba983f88d9db20e3f447ed34a15 1177 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 38 1126 29.028 T 13-10-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 COP00_16295 10501ba983f88d9db20e3f447ed34a15 1177 SUPERFAMILY SSF52540 802 1009 2.43E-48 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_16295 10501ba983f88d9db20e3f447ed34a15 1177 SUPERFAMILY SSF52540 543 803 6.25E-62 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_16295 10501ba983f88d9db20e3f447ed34a15 1177 Gene3D G3DSA:3.40.50.300 498 1008 1.4E-247 T 13-10-2018 COP00_16295 10501ba983f88d9db20e3f447ed34a15 1177 Pfam PF03461 TRCF domain 1025 1117 1.0E-25 T 13-10-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 COP00_16295 10501ba983f88d9db20e3f447ed34a15 1177 SMART SM00487 620 810 3.9E-36 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain COP00_05975 6cf43024e5995561b5ce08b6f0a944c6 398 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 202 398 41.792 T 13-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 COP00_05975 6cf43024e5995561b5ce08b6f0a944c6 398 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 6 196 8.1E-85 T 13-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 COP00_05975 6cf43024e5995561b5ce08b6f0a944c6 398 Gene3D G3DSA:3.90.870.10 1 202 4.7E-88 T 13-10-2018 COP00_05975 6cf43024e5995561b5ce08b6f0a944c6 398 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 1 197 5.1E-82 T 13-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 COP00_05975 6cf43024e5995561b5ce08b6f0a944c6 398 Gene3D G3DSA:3.40.50.10990 203 375 1.3E-74 T 13-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 COP00_05975 6cf43024e5995561b5ce08b6f0a944c6 398 PIRSF PIRSF001259 1 398 9.0E-192 T 13-10-2018 COP00_05975 6cf43024e5995561b5ce08b6f0a944c6 398 Pfam PF00925 GTP cyclohydrolase II 207 372 3.7E-75 T 13-10-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 COP00_05975 6cf43024e5995561b5ce08b6f0a944c6 398 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 1 201 38.318 T 13-10-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 COP00_05975 6cf43024e5995561b5ce08b6f0a944c6 398 Hamap MF_01283 Riboflavin biosynthesis protein RibBA [ribBA]. 1 394 56.121 T 13-10-2018 IPR016299 Riboflavin biosynthesis protein RibBA GO:0009231 KEGG: 00740+3.5.4.25+4.1.99.12|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 COP00_05975 6cf43024e5995561b5ce08b6f0a944c6 398 SUPERFAMILY SSF142695 203 375 6.67E-71 T 13-10-2018 IPR036144 RibA-like superfamily KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 COP00_05975 6cf43024e5995561b5ce08b6f0a944c6 398 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 209 396 3.4E-81 T 13-10-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|KEGG: 00790+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539|MetaCyc: PWY-7991 COP00_05975 6cf43024e5995561b5ce08b6f0a944c6 398 SUPERFAMILY SSF55821 2 198 1.14E-84 T 13-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily COP00_20870 c07b7efc9783d0e787c933ed034d83c5 373 Pfam PF08756 YfkB-like domain 221 371 1.5E-78 T 13-10-2018 IPR014866 YfkB-like domain COP00_20870 c07b7efc9783d0e787c933ed034d83c5 373 Pfam PF13353 4Fe-4S single cluster domain 41 112 7.7E-6 T 13-10-2018 COP00_20870 c07b7efc9783d0e787c933ed034d83c5 373 Pfam PF04055 Radical SAM superfamily 37 190 3.3E-10 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 COP00_20870 c07b7efc9783d0e787c933ed034d83c5 373 SUPERFAMILY SSF102114 32 330 8.24E-28 T 13-10-2018 COP00_20870 c07b7efc9783d0e787c933ed034d83c5 373 TIGRFAM TIGR04478 rSAM_YfkAB: radical SAM/CxCxxxxC motif protein YfkAB 9 371 2.9E-198 T 13-10-2018 IPR031004 Radical SAM/CxCxxxxC motif protein YfkAB COP00_20870 c07b7efc9783d0e787c933ed034d83c5 373 Gene3D G3DSA:3.20.20.70 23 292 4.8E-22 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 COP00_01435 e9621817e83c8188eae4ae638e3db7e7 89 Pfam PF01313 Bacterial export proteins, family 3 6 77 5.8E-30 T 13-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 COP00_01435 e9621817e83c8188eae4ae638e3db7e7 89 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 1 87 3.2E-33 T 13-10-2018 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 COP00_01435 e9621817e83c8188eae4ae638e3db7e7 89 PIRSF PIRSF004669 1 89 4.6E-35 T 13-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 COP00_01435 e9621817e83c8188eae4ae638e3db7e7 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 1.6E-24 T 13-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 COP00_01435 e9621817e83c8188eae4ae638e3db7e7 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 1.6E-24 T 13-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 COP00_01435 e9621817e83c8188eae4ae638e3db7e7 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 1.6E-24 T 13-10-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 COP00_17490 4476e1fc630a4e217aadab0106e6333f 252 Gene3D G3DSA:3.40.50.150 38 252 1.7E-61 T 13-10-2018 COP00_17490 4476e1fc630a4e217aadab0106e6333f 252 Pfam PF08241 Methyltransferase domain 54 149 6.4E-25 T 13-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 COP00_17490 4476e1fc630a4e217aadab0106e6333f 252 SUPERFAMILY SSF53335 13 231 1.98E-43 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase COP00_00115 4d2f84a55972bdc4c3e0d8a6058b778d 381 Pfam PF14659 Phage integrase, N-terminal SAM-like domain 67 122 5.0E-16 T 13-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 COP00_00115 4d2f84a55972bdc4c3e0d8a6058b778d 381 Gene3D G3DSA:1.10.443.10 170 379 5.8E-52 T 13-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 COP00_00115 4d2f84a55972bdc4c3e0d8a6058b778d 381 Pfam PF14657 Arm DNA-binding domain 12 57 7.7E-11 T 13-10-2018 IPR028259 AP2-like integrase, N-terminal domain COP00_00115 4d2f84a55972bdc4c3e0d8a6058b778d 381 Gene3D G3DSA:1.10.150.130 61 169 2.2E-19 T 13-10-2018 IPR010998 Integrase/recombinase, N-terminal COP00_00115 4d2f84a55972bdc4c3e0d8a6058b778d 381 SUPERFAMILY SSF56349 67 370 4.41E-61 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 COP00_00115 4d2f84a55972bdc4c3e0d8a6058b778d 381 Pfam PF00589 Phage integrase family 175 363 4.7E-24 T 13-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 COP00_13815 fcef98cdc45311342d92242192db6767 184 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 6 176 1.2E-56 T 13-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 COP00_13815 fcef98cdc45311342d92242192db6767 184 ProSitePatterns PS00389 ATP synthase delta (OSCP) subunit signature. 138 157 - T 13-10-2018 IPR020781 ATPase, OSCP/delta subunit, conserved site GO:0015986|GO:0016020|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 COP00_13815 fcef98cdc45311342d92242192db6767 184 SUPERFAMILY SSF47928 2 105 1.07E-25 T 13-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 COP00_13815 fcef98cdc45311342d92242192db6767 184 Pfam PF00213 ATP synthase delta (OSCP) subunit 6 176 1.4E-50 T 13-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 COP00_13815 fcef98cdc45311342d92242192db6767 184 Gene3D G3DSA:1.10.520.20 5 97 3.1E-12 T 13-10-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 COP00_13815 fcef98cdc45311342d92242192db6767 184 PRINTS PR00125 ATP synthase delta subunit signature 74 85 4.5E-28 T 13-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 COP00_13815 fcef98cdc45311342d92242192db6767 184 PRINTS PR00125 ATP synthase delta subunit signature 136 151 4.5E-28 T 13-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 COP00_13815 fcef98cdc45311342d92242192db6767 184 PRINTS PR00125 ATP synthase delta subunit signature 6 25 4.5E-28 T 13-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 COP00_13815 fcef98cdc45311342d92242192db6767 184 PRINTS PR00125 ATP synthase delta subunit signature 85 99 4.5E-28 T 13-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 COP00_13815 fcef98cdc45311342d92242192db6767 184 PRINTS PR00125 ATP synthase delta subunit signature 151 169 4.5E-28 T 13-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 COP00_13815 fcef98cdc45311342d92242192db6767 184 Hamap MF_01416 ATP synthase subunit delta [atpD]. 2 178 20.758 T 13-10-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 COP00_20025 d7482db2e0c4961939e8fa0ce1d4b9ff 509 SUPERFAMILY SSF51011 419 507 1.24E-34 T 13-10-2018 COP00_20025 d7482db2e0c4961939e8fa0ce1d4b9ff 509 Gene3D G3DSA:2.40.30.140 129 230 1.2E-166 T 13-10-2018 COP00_20025 d7482db2e0c4961939e8fa0ce1d4b9ff 509 Pfam PF09154 Domain of unknown function (DUF1939) 461 505 7.1E-7 T 13-10-2018 IPR015237 Alpha-amylase C-terminal, prokaryotic GO:0004553 COP00_20025 d7482db2e0c4961939e8fa0ce1d4b9ff 509 SUPERFAMILY SSF51445 30 399 3.21E-105 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily COP00_20025 d7482db2e0c4961939e8fa0ce1d4b9ff 509 Pfam PF00128 Alpha amylase, catalytic domain 56 397 4.8E-30 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 COP00_20025 d7482db2e0c4961939e8fa0ce1d4b9ff 509 Gene3D G3DSA:2.60.40.1180 422 508 9.7E-34 T 13-10-2018 IPR013780 Glycosyl hydrolase, all-beta COP00_20025 d7482db2e0c4961939e8fa0ce1d4b9ff 509 SMART SM00642 30 416 7.3E-72 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 COP00_20025 d7482db2e0c4961939e8fa0ce1d4b9ff 509 PIRSF PIRSF001021 2 509 1.5E-232 T 13-10-2018 IPR013776 Alpha-amylase, thermostable GO:0004553|GO:0005509|GO:0005975 KEGG: 00500+3.2.1.1 COP00_20025 d7482db2e0c4961939e8fa0ce1d4b9ff 509 Gene3D G3DSA:3.20.20.80 31 395 1.2E-166 T 13-10-2018 COP00_07820 d1e58c6f4feffbb74739373d189c63bc 61 Pfam PF10055 Uncharacterized small protein (DUF2292) 11 47 1.4E-15 T 13-10-2018 IPR018743 Protein of unknown function DUF2292 COP00_02315 cc8938126456b73970cdac4c19221828 79 SUPERFAMILY SSF47413 2 75 1.88E-8 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 COP00_02315 cc8938126456b73970cdac4c19221828 79 Gene3D G3DSA:1.10.260.40 3 73 2.5E-9 T 13-10-2018 COP00_02315 cc8938126456b73970cdac4c19221828 79 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 5 74 3.5E-13 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 COP00_15140 563afc05e665d0d13c22f0a2aaa9b5cb 230 Pfam PF00486 Transcriptional regulatory protein, C terminal 150 222 1.1E-21 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 COP00_15140 563afc05e665d0d13c22f0a2aaa9b5cb 230 SUPERFAMILY SSF46894 132 222 3.97E-22 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 COP00_15140 563afc05e665d0d13c22f0a2aaa9b5cb 230 SMART SM00448 2 112 8.4E-28 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 COP00_15140 563afc05e665d0d13c22f0a2aaa9b5cb 230 Gene3D G3DSA:1.10.10.10 131 228 2.1E-23 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_15140 563afc05e665d0d13c22f0a2aaa9b5cb 230 Pfam PF00072 Response regulator receiver domain 5 113 2.9E-21 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 COP00_15140 563afc05e665d0d13c22f0a2aaa9b5cb 230 Gene3D G3DSA:3.40.50.2300 2 125 7.6E-27 T 13-10-2018 COP00_15140 563afc05e665d0d13c22f0a2aaa9b5cb 230 SMART SM00862 148 223 1.5E-15 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 COP00_15140 563afc05e665d0d13c22f0a2aaa9b5cb 230 SUPERFAMILY SSF52172 1 124 1.07E-32 T 13-10-2018 IPR011006 CheY-like superfamily COP00_23065 7648dd230447e12bfcc2cba13fc41e27 328 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 4 326 4.7E-124 T 13-10-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 COP00_23065 7648dd230447e12bfcc2cba13fc41e27 328 Gene3D G3DSA:3.90.25.10 173 307 7.5E-119 T 13-10-2018 COP00_23065 7648dd230447e12bfcc2cba13fc41e27 328 Gene3D G3DSA:3.40.50.720 4 253 7.5E-119 T 13-10-2018 COP00_23065 7648dd230447e12bfcc2cba13fc41e27 328 Pfam PF01370 NAD dependent epimerase/dehydratase family 4 253 6.5E-51 T 13-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 COP00_23065 7648dd230447e12bfcc2cba13fc41e27 328 SUPERFAMILY SSF51735 1 325 2.08E-88 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily COP00_24130 b7dd9d3805cdf061cc91de07676aef98 259 Gene3D G3DSA:3.60.110.10 1 259 8.4E-86 T 13-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily COP00_24130 b7dd9d3805cdf061cc91de07676aef98 259 Pfam PF00795 Carbon-nitrogen hydrolase 5 245 3.5E-46 T 13-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 COP00_24130 b7dd9d3805cdf061cc91de07676aef98 259 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 141 161 - T 13-10-2018 IPR001110 Uncharacterised protein family UPF0012, conserved site COP00_24130 b7dd9d3805cdf061cc91de07676aef98 259 SUPERFAMILY SSF56317 3 259 1.44E-68 T 13-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily COP00_11245 84d1c29ca4d512c9cbb914100a037e91 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 1.1E-20 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 COP00_11245 84d1c29ca4d512c9cbb914100a037e91 296 Pfam PF03466 LysR substrate binding domain 88 290 5.3E-45 T 13-10-2018 IPR005119 LysR, substrate-binding COP00_11245 84d1c29ca4d512c9cbb914100a037e91 296 SUPERFAMILY SSF46785 2 86 4.59E-22 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_11245 84d1c29ca4d512c9cbb914100a037e91 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.3E-10 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 COP00_11245 84d1c29ca4d512c9cbb914100a037e91 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.3E-10 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 COP00_11245 84d1c29ca4d512c9cbb914100a037e91 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.3E-10 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 COP00_11245 84d1c29ca4d512c9cbb914100a037e91 296 Gene3D G3DSA:1.10.10.10 1 88 1.5E-26 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_11245 84d1c29ca4d512c9cbb914100a037e91 296 SUPERFAMILY SSF53850 90 293 1.48E-42 T 13-10-2018 COP00_11245 84d1c29ca4d512c9cbb914100a037e91 296 Gene3D G3DSA:3.40.190.290 90 295 2.1E-55 T 13-10-2018 COP00_10525 e571706efe1d71740fc9e632ac1efa7d 489 SUPERFAMILY SSF51690 141 479 6.33E-131 T 13-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 COP00_10525 e571706efe1d71740fc9e632ac1efa7d 489 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 159 348 1.5E-13 T 13-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 COP00_10525 e571706efe1d71740fc9e632ac1efa7d 489 Gene3D G3DSA:3.20.140.10 12 471 1.2E-205 T 13-10-2018 COP00_10525 e571706efe1d71740fc9e632ac1efa7d 489 SUPERFAMILY SSF54675 8 140 1.13E-49 T 13-10-2018 COP00_10525 e571706efe1d71740fc9e632ac1efa7d 489 Gene3D G3DSA:3.20.20.70 153 320 1.2E-205 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 COP00_10525 e571706efe1d71740fc9e632ac1efa7d 489 PIRSF PIRSF000484 3 480 1.4E-154 T 13-10-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 COP00_10525 e571706efe1d71740fc9e632ac1efa7d 489 TIGRFAM TIGR01513 NAPRTase_put: nicotinate phosphoribosyltransferase 11 465 2.4E-181 T 13-10-2018 IPR006405 Nicotinate phosphoribosyltransferase pncB-type GO:0004516|GO:0019358 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264|Reactome: R-HSA-6798695 COP00_14830 b77fb810afdfb9dd712d9d96342dc197 276 Gene3D G3DSA:3.20.20.370 55 272 4.4E-68 T 13-10-2018 COP00_14830 b77fb810afdfb9dd712d9d96342dc197 276 Pfam PF01522 Polysaccharide deacetylase 113 236 9.1E-37 T 13-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 COP00_14830 b77fb810afdfb9dd712d9d96342dc197 276 SUPERFAMILY SSF88713 75 248 3.21E-45 T 13-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 COP00_03920 c3bc8be10db1cef5762348ad4ecab2b0 151 SUPERFAMILY SSF54637 23 139 1.27E-25 T 13-10-2018 IPR029069 HotDog domain superfamily COP00_03920 c3bc8be10db1cef5762348ad4ecab2b0 151 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 28 131 5.9E-18 T 13-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 COP00_03920 c3bc8be10db1cef5762348ad4ecab2b0 151 Pfam PF03061 Thioesterase superfamily 57 128 1.9E-11 T 13-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 COP00_03920 c3bc8be10db1cef5762348ad4ecab2b0 151 Gene3D G3DSA:3.10.129.10 10 150 1.8E-37 T 13-10-2018 COP00_05370 07aeb5a8f5eaaa44d31ccb16ab460b1e 500 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 265 284 1.5E-83 T 13-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 COP00_05370 07aeb5a8f5eaaa44d31ccb16ab460b1e 500 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 333 352 1.5E-83 T 13-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 COP00_05370 07aeb5a8f5eaaa44d31ccb16ab460b1e 500 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 447 465 1.5E-83 T 13-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 COP00_05370 07aeb5a8f5eaaa44d31ccb16ab460b1e 500 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 402 423 1.5E-83 T 13-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 COP00_05370 07aeb5a8f5eaaa44d31ccb16ab460b1e 500 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 148 168 1.5E-83 T 13-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 COP00_05370 07aeb5a8f5eaaa44d31ccb16ab460b1e 500 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 379 396 1.5E-83 T 13-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 COP00_05370 07aeb5a8f5eaaa44d31ccb16ab460b1e 500 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 228 244 1.5E-83 T 13-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 COP00_05370 07aeb5a8f5eaaa44d31ccb16ab460b1e 500 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 292 308 1.5E-83 T 13-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 COP00_05370 07aeb5a8f5eaaa44d31ccb16ab460b1e 500 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 245 264 1.5E-83 T 13-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 COP00_05370 07aeb5a8f5eaaa44d31ccb16ab460b1e 500 Gene3D G3DSA:1.10.1370.30 2 500 1.1E-218 T 13-10-2018 COP00_05370 07aeb5a8f5eaaa44d31ccb16ab460b1e 500 PIRSF PIRSF006615 2 500 1.4E-202 T 13-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 COP00_05370 07aeb5a8f5eaaa44d31ccb16ab460b1e 500 SUPERFAMILY SSF55486 7 495 6.11E-121 T 13-10-2018 COP00_05370 07aeb5a8f5eaaa44d31ccb16ab460b1e 500 Pfam PF02074 Carboxypeptidase Taq (M32) metallopeptidase 3 495 2.0E-254 T 13-10-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 COP00_23740 9858e06137497680dc4d60f6e7df7aa9 209 Pfam PF04854 Protein of unknown function, DUF624 19 95 5.3E-25 T 13-10-2018 IPR006938 Protein of unknown function DUF624 COP00_21840 5814d432e94a8e68d952d2b7a5d33735 420 Gene3D G3DSA:3.40.50.1820 126 420 3.4E-61 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold COP00_21840 5814d432e94a8e68d952d2b7a5d33735 420 PIRSF PIRSF016521 1 420 2.2E-120 T 13-10-2018 IPR016662 Acyl-CoA thioesterase, long chain GO:0006637|GO:0016790 COP00_21840 5814d432e94a8e68d952d2b7a5d33735 420 Pfam PF08840 BAAT / Acyl-CoA thioester hydrolase C terminal 197 419 8.9E-59 T 13-10-2018 IPR014940 BAAT/Acyl-CoA thioester hydrolase C-terminal COP00_21840 5814d432e94a8e68d952d2b7a5d33735 420 Pfam PF04775 Acyl-CoA thioester hydrolase/BAAT N-terminal region 16 134 8.2E-32 T 13-10-2018 IPR006862 Acyl-CoA thioester hydrolase/bile acid-CoA amino acid N-acetyltransferase COP00_21840 5814d432e94a8e68d952d2b7a5d33735 420 SUPERFAMILY SSF53474 67 418 1.69E-31 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold COP00_21840 5814d432e94a8e68d952d2b7a5d33735 420 Gene3D G3DSA:2.60.40.2240 3 124 1.9E-30 T 13-10-2018 COP00_17715 dc79aa33a61c3e7260ba807e08f942ee 241 SMART SM00345 22 81 5.8E-21 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 COP00_17715 dc79aa33a61c3e7260ba807e08f942ee 241 Pfam PF07729 FCD domain 104 220 2.6E-21 T 13-10-2018 IPR011711 GntR, C-terminal COP00_17715 dc79aa33a61c3e7260ba807e08f942ee 241 SMART SM00895 103 221 1.2E-18 T 13-10-2018 IPR011711 GntR, C-terminal COP00_17715 dc79aa33a61c3e7260ba807e08f942ee 241 Gene3D G3DSA:1.20.120.530 99 230 5.0E-23 T 13-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal COP00_17715 dc79aa33a61c3e7260ba807e08f942ee 241 Gene3D G3DSA:1.10.10.10 6 81 1.4E-19 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_17715 dc79aa33a61c3e7260ba807e08f942ee 241 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 55 71 8.2E-7 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 COP00_17715 dc79aa33a61c3e7260ba807e08f942ee 241 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 41 55 8.2E-7 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 COP00_17715 dc79aa33a61c3e7260ba807e08f942ee 241 SUPERFAMILY SSF48008 99 226 8.11E-21 T 13-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal COP00_17715 dc79aa33a61c3e7260ba807e08f942ee 241 Pfam PF00392 Bacterial regulatory proteins, gntR family 18 80 2.4E-19 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 COP00_17715 dc79aa33a61c3e7260ba807e08f942ee 241 SUPERFAMILY SSF46785 13 82 3.57E-17 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_10810 5b360a14a34a21484b681608d5a4d80e 298 PIRSF PIRSF005963 2 298 1.2E-137 T 13-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 COP00_10810 5b360a14a34a21484b681608d5a4d80e 298 Gene3D G3DSA:3.20.20.70 17 266 4.1E-22 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 COP00_10810 5b360a14a34a21484b681608d5a4d80e 298 SMART SM00729 57 265 1.6E-18 T 13-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 COP00_10810 5b360a14a34a21484b681608d5a4d80e 298 SUPERFAMILY SSF102114 20 287 1.31E-64 T 13-10-2018 COP00_10810 5b360a14a34a21484b681608d5a4d80e 298 TIGRFAM TIGR00510 lipA: lipoyl synthase 3 293 9.9E-122 T 13-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 COP00_10810 5b360a14a34a21484b681608d5a4d80e 298 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 3 45 5.4E-12 T 13-10-2018 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 COP00_10810 5b360a14a34a21484b681608d5a4d80e 298 Pfam PF04055 Radical SAM superfamily 64 224 4.5E-14 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 COP00_10810 5b360a14a34a21484b681608d5a4d80e 298 Hamap MF_00206 Lipoyl synthase [lipA]. 1 295 149.424 T 13-10-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 COP00_18410 314eb4ed824516562e00a953652e1373 473 Gene3D G3DSA:3.40.1670.10 326 440 2.9E-28 T 13-10-2018 COP00_18410 314eb4ed824516562e00a953652e1373 473 SUPERFAMILY SSF143968 311 463 8.89E-40 T 13-10-2018 COP00_18410 314eb4ed824516562e00a953652e1373 473 SUPERFAMILY SSF50475 3 308 1.41E-86 T 13-10-2018 COP00_18410 314eb4ed824516562e00a953652e1373 473 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 6 441 2.2E-158 T 13-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 COP00_18410 314eb4ed824516562e00a953652e1373 473 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 10 415 1.2E-115 T 13-10-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 COP00_18410 314eb4ed824516562e00a953652e1373 473 Hamap MF_01985 Phenolic acid decarboxylase subunit C. 1 472 74.003 T 13-10-2018 IPR032902 Phenolic acid decarboxylase subunit C GO:0016831 COP00_14445 26b4dad16bf900e109789ec0fc16567b 396 SMART SM00359 2 87 4.2E-11 T 13-10-2018 IPR002478 PUA domain GO:0003723 COP00_14445 26b4dad16bf900e109789ec0fc16567b 396 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 102 380 5.3E-35 T 13-10-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 COP00_14445 26b4dad16bf900e109789ec0fc16567b 396 Gene3D G3DSA:2.30.130.10 1 70 9.5E-24 T 13-10-2018 IPR036974 PUA domain superfamily GO:0003723 COP00_14445 26b4dad16bf900e109789ec0fc16567b 396 SUPERFAMILY SSF53335 78 391 9.0E-64 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase COP00_14445 26b4dad16bf900e109789ec0fc16567b 396 Gene3D G3DSA:3.30.750.80 71 178 1.4E-35 T 13-10-2018 COP00_14445 26b4dad16bf900e109789ec0fc16567b 396 SUPERFAMILY SSF88697 1 70 1.24E-18 T 13-10-2018 IPR015947 PUA-like superfamily COP00_14445 26b4dad16bf900e109789ec0fc16567b 396 Gene3D G3DSA:3.40.50.150 179 396 1.6E-59 T 13-10-2018 COP00_17470 43f34094b6d1294d285b2bf11fb14709 226 Gene3D G3DSA:3.40.50.1860 105 208 1.4E-51 T 13-10-2018 COP00_17470 43f34094b6d1294d285b2bf11fb14709 226 Gene3D G3DSA:3.40.50.1860 2 215 1.4E-51 T 13-10-2018 COP00_17470 43f34094b6d1294d285b2bf11fb14709 226 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 79 87 - T 13-10-2018 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 COP00_17470 43f34094b6d1294d285b2bf11fb14709 226 TIGRFAM TIGR00035 asp_race: aspartate racemase 1 222 5.3E-36 T 13-10-2018 IPR004380 Aspartate racemase GO:0006520|GO:0016855 COP00_17470 43f34094b6d1294d285b2bf11fb14709 226 SUPERFAMILY SSF53681 116 221 7.98E-18 T 13-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 COP00_17470 43f34094b6d1294d285b2bf11fb14709 226 Pfam PF01177 Asp/Glu/Hydantoin racemase 5 216 1.0E-36 T 13-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 COP00_17470 43f34094b6d1294d285b2bf11fb14709 226 SUPERFAMILY SSF53681 1 111 2.62E-26 T 13-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 COP00_00795 e647b3c13fac55b3150c10ef68a1bbf3 159 PIRSF PIRSF037732 1 159 2.0E-83 T 13-10-2018 IPR017274 Putative N-acetyltransferase YlbP COP00_00795 e647b3c13fac55b3150c10ef68a1bbf3 159 Gene3D G3DSA:3.40.630.30 1 159 1.9E-61 T 13-10-2018 COP00_00795 e647b3c13fac55b3150c10ef68a1bbf3 159 Hamap MF_00824 Uncharacterized N-acetyltransferase . 1 148 43.722 T 13-10-2018 IPR017274 Putative N-acetyltransferase YlbP COP00_00795 e647b3c13fac55b3150c10ef68a1bbf3 159 Pfam PF00583 Acetyltransferase (GNAT) family 34 106 2.0E-7 T 13-10-2018 IPR000182 GNAT domain COP00_00795 e647b3c13fac55b3150c10ef68a1bbf3 159 SUPERFAMILY SSF55729 29 140 7.48E-14 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase COP00_13765 b2ca9db9f7c645a72dea103829b21513 224 SUPERFAMILY SSF53300 30 218 3.86E-26 T 13-10-2018 IPR036465 von Willebrand factor A-like domain superfamily COP00_13765 b2ca9db9f7c645a72dea103829b21513 224 Pfam PF00092 von Willebrand factor type A domain 32 214 5.1E-16 T 13-10-2018 IPR002035 von Willebrand factor, type A COP00_13765 b2ca9db9f7c645a72dea103829b21513 224 SMART SM00327 30 217 8.9E-15 T 13-10-2018 IPR002035 von Willebrand factor, type A COP00_13765 b2ca9db9f7c645a72dea103829b21513 224 Gene3D G3DSA:3.40.50.410 27 223 2.3E-30 T 13-10-2018 IPR036465 von Willebrand factor A-like domain superfamily COP00_10890 67d6652a39458d04ce8b721a104edc6d 420 Gene3D G3DSA:3.40.190.10 63 378 1.2E-93 T 13-10-2018 COP00_10890 67d6652a39458d04ce8b721a104edc6d 420 SUPERFAMILY SSF53850 19 419 4.69E-79 T 13-10-2018 COP00_10890 67d6652a39458d04ce8b721a104edc6d 420 Gene3D G3DSA:3.40.190.10 151 408 1.2E-93 T 13-10-2018 COP00_10890 67d6652a39458d04ce8b721a104edc6d 420 Pfam PF01547 Bacterial extracellular solute-binding protein 45 335 1.6E-43 T 13-10-2018 IPR006059 Bacterial extracellular solute-binding protein COP00_16675 e3951e97f9f82491c34b4f58bf503c25 102 SUPERFAMILY SSF54999 5 102 6.41E-39 T 13-10-2018 IPR036838 Ribosomal protein S10 domain superfamily COP00_16675 e3951e97f9f82491c34b4f58bf503c25 102 Pfam PF00338 Ribosomal protein S10p/S20e 7 101 7.9E-37 T 13-10-2018 IPR027486 Ribosomal protein S10 domain COP00_16675 e3951e97f9f82491c34b4f58bf503c25 102 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 6.3E-20 T 13-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 COP00_16675 e3951e97f9f82491c34b4f58bf503c25 102 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 6.3E-20 T 13-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 COP00_16675 e3951e97f9f82491c34b4f58bf503c25 102 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 6.3E-20 T 13-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 COP00_16675 e3951e97f9f82491c34b4f58bf503c25 102 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 13-10-2018 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 COP00_16675 e3951e97f9f82491c34b4f58bf503c25 102 SMART SM01403 7 101 5.7E-61 T 13-10-2018 IPR027486 Ribosomal protein S10 domain COP00_16675 e3951e97f9f82491c34b4f58bf503c25 102 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 3.4E-47 T 13-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 COP00_16675 e3951e97f9f82491c34b4f58bf503c25 102 Gene3D G3DSA:3.30.70.600 1 102 1.1E-38 T 13-10-2018 IPR036838 Ribosomal protein S10 domain superfamily COP00_16675 e3951e97f9f82491c34b4f58bf503c25 102 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 28.352 T 13-10-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 COP00_13075 59169914f44ac7aa6a0304715723fda6 74 Gene3D G3DSA:3.30.70.1680 1 63 3.3E-30 T 13-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 COP00_13075 59169914f44ac7aa6a0304715723fda6 74 SUPERFAMILY SSF117130 1 55 3.79E-21 T 13-10-2018 IPR036107 Carbon storage regulator superfamily GO:0003723|GO:0006109|GO:0006402 COP00_13075 59169914f44ac7aa6a0304715723fda6 74 Pfam PF02599 Global regulator protein family 1 53 4.1E-26 T 13-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 COP00_13075 59169914f44ac7aa6a0304715723fda6 74 Hamap MF_00167 Translational regulator CsrA [csrA]. 1 68 18.201 T 13-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 COP00_13075 59169914f44ac7aa6a0304715723fda6 74 TIGRFAM TIGR00202 csrA: carbon storage regulator 1 68 1.5E-33 T 13-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 COP00_13075 59169914f44ac7aa6a0304715723fda6 74 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 48 3.0E-19 T 13-10-2018 IPR003751 Translational regulator CsrA GO:0003723|GO:0006109|GO:0006402 COP00_08620 9eb20e0b43c04eba6e5a449b954711a9 172 SUPERFAMILY SSF55021 2 77 2.38E-20 T 13-10-2018 COP00_08620 9eb20e0b43c04eba6e5a449b954711a9 172 Gene3D G3DSA:3.30.70.260 1 80 4.2E-31 T 13-10-2018 COP00_08620 9eb20e0b43c04eba6e5a449b954711a9 172 Pfam PF10369 Small subunit of acetolactate synthase 85 158 1.1E-27 T 13-10-2018 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 COP00_08620 9eb20e0b43c04eba6e5a449b954711a9 172 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 2 158 3.1E-65 T 13-10-2018 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 COP00_08620 9eb20e0b43c04eba6e5a449b954711a9 172 SUPERFAMILY SSF55021 80 160 1.53E-24 T 13-10-2018 COP00_08620 9eb20e0b43c04eba6e5a449b954711a9 172 Gene3D G3DSA:3.30.70.1150 84 162 1.3E-27 T 13-10-2018 IPR027271 Acetolactate synthase/Transcription factor NikR, C-terminal COP00_08620 9eb20e0b43c04eba6e5a449b954711a9 172 Pfam PF01842 ACT domain 5 68 1.0E-15 T 13-10-2018 IPR002912 ACT domain COP00_08620 9eb20e0b43c04eba6e5a449b954711a9 172 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 1 77 1.0E-34 T 13-10-2018 COP00_22385 62dae1f46fe7fd856be24e0345fef12a 418 SUPERFAMILY SSF53850 19 412 2.58E-74 T 13-10-2018 COP00_22385 62dae1f46fe7fd856be24e0345fef12a 418 Gene3D G3DSA:3.40.190.10 141 405 1.5E-137 T 13-10-2018 COP00_22385 62dae1f46fe7fd856be24e0345fef12a 418 Pfam PF01547 Bacterial extracellular solute-binding protein 44 336 1.0E-32 T 13-10-2018 IPR006059 Bacterial extracellular solute-binding protein COP00_22385 62dae1f46fe7fd856be24e0345fef12a 418 Gene3D G3DSA:3.40.190.10 51 357 1.5E-137 T 13-10-2018 COP00_22650 e29a6ae5a40b438ebeaacefb7edeb26c 612 Gene3D G3DSA:3.20.20.330 3 293 6.9E-89 T 13-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 COP00_22650 e29a6ae5a40b438ebeaacefb7edeb26c 612 Pfam PF02574 Homocysteine S-methyltransferase 12 280 8.1E-60 T 13-10-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 COP00_22650 e29a6ae5a40b438ebeaacefb7edeb26c 612 Gene3D G3DSA:3.20.20.220 310 597 9.4E-50 T 13-10-2018 COP00_22650 e29a6ae5a40b438ebeaacefb7edeb26c 612 SUPERFAMILY SSF82282 2 359 3.92E-102 T 13-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 COP00_22650 e29a6ae5a40b438ebeaacefb7edeb26c 612 SUPERFAMILY SSF51730 311 600 1.22E-66 T 13-10-2018 IPR029041 FAD-linked oxidoreductase-like COP00_22650 e29a6ae5a40b438ebeaacefb7edeb26c 612 Pfam PF02219 Methylenetetrahydrofolate reductase 313 572 1.2E-26 T 13-10-2018 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 COP00_00635 145200c9e5745367c2380252e974bfa5 498 Gene3D G3DSA:3.50.50.60 4 334 4.8E-114 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily COP00_00635 145200c9e5745367c2380252e974bfa5 498 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 271 286 4.2E-45 T 13-10-2018 COP00_00635 145200c9e5745367c2380252e974bfa5 498 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 304 322 4.2E-45 T 13-10-2018 COP00_00635 145200c9e5745367c2380252e974bfa5 498 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 286 302 4.2E-45 T 13-10-2018 COP00_00635 145200c9e5745367c2380252e974bfa5 498 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 4 26 4.2E-45 T 13-10-2018 COP00_00635 145200c9e5745367c2380252e974bfa5 498 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 322 338 4.2E-45 T 13-10-2018 COP00_00635 145200c9e5745367c2380252e974bfa5 498 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 147 162 4.2E-45 T 13-10-2018 COP00_00635 145200c9e5745367c2380252e974bfa5 498 SUPERFAMILY SSF51905 2 347 2.32E-62 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily COP00_00635 145200c9e5745367c2380252e974bfa5 498 Gene3D G3DSA:3.40.30.120 380 493 1.1E-18 T 13-10-2018 COP00_00635 145200c9e5745367c2380252e974bfa5 498 Gene3D G3DSA:3.30.70.2450 176 260 4.8E-114 T 13-10-2018 COP00_00635 145200c9e5745367c2380252e974bfa5 498 Pfam PF01494 FAD binding domain 3 336 2.2E-90 T 13-10-2018 IPR002938 FAD-binding domain GO:0071949 COP00_01455 3f595e83e41052c8d4a83627a2bc21e7 369 SMART SM00382 176 345 0.0046 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_01455 3f595e83e41052c8d4a83627a2bc21e7 369 Gene3D G3DSA:3.40.50.300 172 356 2.1E-82 T 13-10-2018 COP00_01455 3f595e83e41052c8d4a83627a2bc21e7 369 TIGRFAM TIGR03499 FlhF: flagellar biosynthesis protein FlhF 1 264 6.7E-65 T 13-10-2018 IPR020006 Flagellar biosynthesis protein FlhF GO:0003924|GO:0044781 COP00_01455 3f595e83e41052c8d4a83627a2bc21e7 369 Pfam PF00448 SRP54-type protein, GTPase domain 178 366 3.1E-45 T 13-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 COP00_01455 3f595e83e41052c8d4a83627a2bc21e7 369 SUPERFAMILY SSF52540 178 367 1.19E-30 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_01455 3f595e83e41052c8d4a83627a2bc21e7 369 Gene3D G3DSA:1.20.120.1380 120 359 2.1E-82 T 13-10-2018 COP00_01455 3f595e83e41052c8d4a83627a2bc21e7 369 SMART SM00962 177 368 2.1E-56 T 13-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 COP00_21005 1b153aff1b3f3751802e6afbf2243cea 260 Gene3D G3DSA:1.10.10.10 2 76 2.0E-16 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_21005 1b153aff1b3f3751802e6afbf2243cea 260 Pfam PF01380 SIS domain 113 221 8.0E-17 T 13-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 COP00_21005 1b153aff1b3f3751802e6afbf2243cea 260 SUPERFAMILY SSF46689 1 75 7.88E-19 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 COP00_21005 1b153aff1b3f3751802e6afbf2243cea 260 Gene3D G3DSA:3.40.50.10490 85 260 3.0E-25 T 13-10-2018 COP00_21005 1b153aff1b3f3751802e6afbf2243cea 260 SUPERFAMILY SSF53697 87 245 1.13E-22 T 13-10-2018 COP00_21005 1b153aff1b3f3751802e6afbf2243cea 260 Pfam PF01418 Helix-turn-helix domain, rpiR family 1 75 5.3E-27 T 13-10-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 COP00_16760 c8757edc687ff34984273257a047aed7 120 SUPERFAMILY SSF53137 7 118 4.42E-57 T 13-10-2018 COP00_16760 c8757edc687ff34984273257a047aed7 120 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 6 120 30.99 T 13-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 COP00_16760 c8757edc687ff34984273257a047aed7 120 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 6 120 3.3E-53 T 13-10-2018 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_16760 c8757edc687ff34984273257a047aed7 120 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 7 120 1.2E-47 T 13-10-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 COP00_16760 c8757edc687ff34984273257a047aed7 120 Gene3D G3DSA:3.30.420.100 5 120 4.1E-48 T 13-10-2018 COP00_06445 959590995d091fcbf0d5e4ee7301cd01 155 SMART SM00260 1 133 7.5E-6 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 COP00_06445 959590995d091fcbf0d5e4ee7301cd01 155 Gene3D G3DSA:2.30.30.40 8 127 3.9E-20 T 13-10-2018 COP00_06445 959590995d091fcbf0d5e4ee7301cd01 155 SUPERFAMILY SSF50341 4 136 5.62E-23 T 13-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 COP00_06445 959590995d091fcbf0d5e4ee7301cd01 155 Gene3D G3DSA:2.40.50.180 24 128 3.9E-20 T 13-10-2018 COP00_06445 959590995d091fcbf0d5e4ee7301cd01 155 Pfam PF01584 CheW-like domain 6 136 1.3E-19 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 COP00_10895 c1507f1f62d10045c5314b2e1e7a77bd 336 Gene3D G3DSA:3.40.50.12570 201 294 8.5E-65 T 13-10-2018 COP00_10895 c1507f1f62d10045c5314b2e1e7a77bd 336 PIRSF PIRSF009290 6 336 8.4E-92 T 13-10-2018 IPR024713 Fructosamine deglycase FrlB COP00_10895 c1507f1f62d10045c5314b2e1e7a77bd 336 Pfam PF01380 SIS domain 33 143 1.3E-13 T 13-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 COP00_10895 c1507f1f62d10045c5314b2e1e7a77bd 336 Gene3D G3DSA:3.40.50.10490 9 163 1.7E-45 T 13-10-2018 COP00_10895 c1507f1f62d10045c5314b2e1e7a77bd 336 Gene3D G3DSA:1.10.10.2240 166 318 8.5E-65 T 13-10-2018 COP00_10895 c1507f1f62d10045c5314b2e1e7a77bd 336 SUPERFAMILY SSF53697 30 336 1.21E-60 T 13-10-2018 COP00_10365 f8a6aaaf1fe35fc3c85e9aeb32fa2813 142 Gene3D G3DSA:2.30.30.430 13 139 2.7E-49 T 13-10-2018 IPR038080 Kinase associated protein B superfamily COP00_10365 f8a6aaaf1fe35fc3c85e9aeb32fa2813 142 SMART SM01298 28 140 1.0E-67 T 13-10-2018 IPR014916 Kinase associated protein B COP00_10365 f8a6aaaf1fe35fc3c85e9aeb32fa2813 142 SUPERFAMILY SSF141251 18 139 3.53E-51 T 13-10-2018 IPR038080 Kinase associated protein B superfamily COP00_10365 f8a6aaaf1fe35fc3c85e9aeb32fa2813 142 Pfam PF08810 Kinase associated protein B 28 139 2.8E-46 T 13-10-2018 IPR014916 Kinase associated protein B COP00_09700 6e1f6f4a2770528dc033bdc7828bae3f 416 Gene3D G3DSA:1.10.3860.10 1 412 1.8E-123 T 13-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 COP00_09700 6e1f6f4a2770528dc033bdc7828bae3f 416 ProSitePatterns PS00713 Sodium:dicarboxylate symporter family signature 1. 32 47 - T 13-10-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site COP00_09700 6e1f6f4a2770528dc033bdc7828bae3f 416 SUPERFAMILY SSF118215 7 396 1.09E-113 T 13-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 COP00_09700 6e1f6f4a2770528dc033bdc7828bae3f 416 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 290 313 - T 13-10-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site COP00_09700 6e1f6f4a2770528dc033bdc7828bae3f 416 PRINTS PR00173 Glutamate-aspartate symporter signature 70 95 9.0E-35 T 13-10-2018 COP00_09700 6e1f6f4a2770528dc033bdc7828bae3f 416 PRINTS PR00173 Glutamate-aspartate symporter signature 187 206 9.0E-35 T 13-10-2018 COP00_09700 6e1f6f4a2770528dc033bdc7828bae3f 416 PRINTS PR00173 Glutamate-aspartate symporter signature 222 241 9.0E-35 T 13-10-2018 COP00_09700 6e1f6f4a2770528dc033bdc7828bae3f 416 PRINTS PR00173 Glutamate-aspartate symporter signature 349 369 9.0E-35 T 13-10-2018 COP00_09700 6e1f6f4a2770528dc033bdc7828bae3f 416 PRINTS PR00173 Glutamate-aspartate symporter signature 322 341 9.0E-35 T 13-10-2018 COP00_09700 6e1f6f4a2770528dc033bdc7828bae3f 416 PRINTS PR00173 Glutamate-aspartate symporter signature 140 162 9.0E-35 T 13-10-2018 COP00_09700 6e1f6f4a2770528dc033bdc7828bae3f 416 PRINTS PR00173 Glutamate-aspartate symporter signature 287 313 9.0E-35 T 13-10-2018 COP00_09700 6e1f6f4a2770528dc033bdc7828bae3f 416 PRINTS PR00173 Glutamate-aspartate symporter signature 3 23 9.0E-35 T 13-10-2018 COP00_09700 6e1f6f4a2770528dc033bdc7828bae3f 416 Pfam PF00375 Sodium:dicarboxylate symporter family 6 395 1.9E-120 T 13-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 COP00_07180 3dc8e639f9c006832d07a63b145a57da 607 SMART SM00400 36 90 5.0E-35 T 13-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 COP00_07180 3dc8e639f9c006832d07a63b145a57da 607 SUPERFAMILY SSF48024 467 567 3.27E-9 T 13-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 COP00_07180 3dc8e639f9c006832d07a63b145a57da 607 Gene3D G3DSA:3.90.580.10 1 101 7.2E-42 T 13-10-2018 IPR036977 DNA Primase, CHC2-type zinc finger GO:0003677|GO:0006260|GO:0008270 COP00_07180 3dc8e639f9c006832d07a63b145a57da 607 Pfam PF10410 DnaB-helicase binding domain of primase 371 424 2.6E-11 T 13-10-2018 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 COP00_07180 3dc8e639f9c006832d07a63b145a57da 607 SUPERFAMILY SSF56731 117 426 2.75E-100 T 13-10-2018 COP00_07180 3dc8e639f9c006832d07a63b145a57da 607 TIGRFAM TIGR01391 dnaG: DNA primase 4 420 5.2E-149 T 13-10-2018 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 COP00_07180 3dc8e639f9c006832d07a63b145a57da 607 PIRSF PIRSF002811 2 607 1.6E-199 T 13-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 COP00_07180 3dc8e639f9c006832d07a63b145a57da 607 Hamap MF_00974 DNA primase [dnaG]. 4 597 29.645 T 13-10-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 COP00_07180 3dc8e639f9c006832d07a63b145a57da 607 Gene3D G3DSA:1.10.860.10 471 567 1.9E-29 T 13-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal COP00_07180 3dc8e639f9c006832d07a63b145a57da 607 Pfam PF08275 DNA primase catalytic core, N-terminal domain 128 255 4.1E-43 T 13-10-2018 IPR013264 DNA primase, catalytic core, N-terminal COP00_07180 3dc8e639f9c006832d07a63b145a57da 607 SUPERFAMILY SSF57783 4 99 3.06E-36 T 13-10-2018 COP00_07180 3dc8e639f9c006832d07a63b145a57da 607 Pfam PF01807 CHC2 zinc finger 6 99 2.7E-39 T 13-10-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 COP00_07180 3dc8e639f9c006832d07a63b145a57da 607 Gene3D G3DSA:3.90.980.10 112 243 1.9E-49 T 13-10-2018 IPR037068 DNA primase, catalytic core, N-terminal domain superfamily COP00_07180 3dc8e639f9c006832d07a63b145a57da 607 Pfam PF13155 Toprim-like 265 350 1.1E-18 T 13-10-2018 COP00_07180 3dc8e639f9c006832d07a63b145a57da 607 SMART SM00493 262 333 2.7E-17 T 13-10-2018 IPR006171 TOPRIM domain COP00_07180 3dc8e639f9c006832d07a63b145a57da 607 Gene3D G3DSA:3.40.1360.10 244 366 6.8E-38 T 13-10-2018 COP00_06080 1af01daf62a8635bbc09a520a858f7b8 146 Gene3D G3DSA:3.30.565.10 1 143 2.4E-36 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily COP00_06080 1af01daf62a8635bbc09a520a858f7b8 146 SMART SM00387 35 140 9.4E-11 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase COP00_06080 1af01daf62a8635bbc09a520a858f7b8 146 Hamap MF_00637 Anti-sigma F factor [spoIIAB]. 1 140 35.782 T 13-10-2018 IPR010194 Anti-sigma F factor GO:0004674|GO:0005524|GO:0006468|GO:0016989|GO:0042174|GO:0045892 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 COP00_06080 1af01daf62a8635bbc09a520a858f7b8 146 Pfam PF13581 Histidine kinase-like ATPase domain 11 136 6.4E-21 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase COP00_06080 1af01daf62a8635bbc09a520a858f7b8 146 TIGRFAM TIGR01925 spIIAB: anti-sigma F factor 1 137 8.4E-75 T 13-10-2018 IPR010194 Anti-sigma F factor GO:0004674|GO:0005524|GO:0006468|GO:0016989|GO:0042174|GO:0045892 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 COP00_06080 1af01daf62a8635bbc09a520a858f7b8 146 SUPERFAMILY SSF55874 28 135 9.69E-26 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily COP00_11115 7ec37a8ad3f3e924331cfb189f5b7f9b 224 SUPERFAMILY SSF52172 3 123 1.57E-32 T 13-10-2018 IPR011006 CheY-like superfamily COP00_11115 7ec37a8ad3f3e924331cfb189f5b7f9b 224 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 221 1.1E-22 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 COP00_11115 7ec37a8ad3f3e924331cfb189f5b7f9b 224 SUPERFAMILY SSF46894 129 221 1.59E-24 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 COP00_11115 7ec37a8ad3f3e924331cfb189f5b7f9b 224 SMART SM00448 3 113 3.1E-35 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 COP00_11115 7ec37a8ad3f3e924331cfb189f5b7f9b 224 SMART SM00862 150 221 3.6E-23 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 COP00_11115 7ec37a8ad3f3e924331cfb189f5b7f9b 224 Gene3D G3DSA:1.10.10.10 131 224 7.7E-27 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_11115 7ec37a8ad3f3e924331cfb189f5b7f9b 224 Gene3D G3DSA:3.40.50.2300 2 130 4.6E-31 T 13-10-2018 COP00_11115 7ec37a8ad3f3e924331cfb189f5b7f9b 224 Pfam PF00072 Response regulator receiver domain 5 113 6.4E-25 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 COP00_24215 97de4006975f996f360c29785ee03c02 163 Gene3D G3DSA:3.30.1130.10 19 163 3.0E-69 T 13-10-2018 COP00_24215 97de4006975f996f360c29785ee03c02 163 SUPERFAMILY SSF55620 26 134 1.85E-29 T 13-10-2018 COP00_24215 97de4006975f996f360c29785ee03c02 163 Hamap MF_00818 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 163 71.981 T 13-10-2018 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 COP00_24215 97de4006975f996f360c29785ee03c02 163 TIGRFAM TIGR03139 QueF-II: 7-cyano-7-deazaguanine reductase 25 136 8.8E-56 T 13-10-2018 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 COP00_24215 97de4006975f996f360c29785ee03c02 163 PIRSF PIRSF027377 7 145 1.4E-62 T 13-10-2018 IPR016856 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 1 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 COP00_24215 97de4006975f996f360c29785ee03c02 163 Pfam PF14489 QueF-like protein 60 138 1.0E-35 T 13-10-2018 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 COP00_09755 b06e961e15da302c8dc962e034186824 331 SUPERFAMILY SSF53850 27 252 1.92E-35 T 13-10-2018 COP00_09755 b06e961e15da302c8dc962e034186824 331 Gene3D G3DSA:3.40.190.10 36 302 9.2E-49 T 13-10-2018 COP00_09755 b06e961e15da302c8dc962e034186824 331 Pfam PF13379 NMT1-like family 37 258 2.4E-24 T 13-10-2018 COP00_09755 b06e961e15da302c8dc962e034186824 331 Gene3D G3DSA:3.40.190.10 111 214 9.2E-49 T 13-10-2018 COP00_12745 4acfee95ee7c488d21544680f9f776aa 107 PIRSF PIRSF036521 1 106 5.0E-53 T 13-10-2018 IPR011411 NTP Pyrophosphohydrolase MazG-related COP00_12745 4acfee95ee7c488d21544680f9f776aa 107 SUPERFAMILY SSF101386 3 103 1.48E-22 T 13-10-2018 COP00_12745 4acfee95ee7c488d21544680f9f776aa 107 Gene3D G3DSA:1.10.287.1080 1 101 5.3E-24 T 13-10-2018 COP00_12745 4acfee95ee7c488d21544680f9f776aa 107 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 29 102 2.3E-9 T 13-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core COP00_16640 f0feac04bcc0a053b4ad70707d711aee 1193 Gene3D G3DSA:2.40.50.100 672 751 1.1E-28 T 13-10-2018 COP00_16640 f0feac04bcc0a053b4ad70707d711aee 1193 Gene3D G3DSA:3.90.1100.10 389 592 3.6E-74 T 13-10-2018 COP00_16640 f0feac04bcc0a053b4ad70707d711aee 1193 Gene3D G3DSA:2.40.270.10 981 1047 6.2E-25 T 13-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 COP00_16640 f0feac04bcc0a053b4ad70707d711aee 1193 SUPERFAMILY SSF64484 13 1157 0.0 T 13-10-2018 COP00_16640 f0feac04bcc0a053b4ad70707d711aee 1193 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 15 1147 12.635 T 13-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 COP00_16640 f0feac04bcc0a053b4ad70707d711aee 1193 Pfam PF10385 RNA polymerase beta subunit external 1 domain 547 614 3.5E-26 T 13-10-2018 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 COP00_16640 f0feac04bcc0a053b4ad70707d711aee 1193 Gene3D G3DSA:2.40.270.10 752 790 4.2E-6 T 13-10-2018 IPR037033 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 COP00_16640 f0feac04bcc0a053b4ad70707d711aee 1193 ProSitePatterns PS01166 RNA polymerases beta chain signature. 922 934 - T 13-10-2018 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 COP00_16640 f0feac04bcc0a053b4ad70707d711aee 1193 Pfam PF04560 RNA polymerase Rpb2, domain 7 1071 1145 4.1E-27 T 13-10-2018 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 COP00_16640 f0feac04bcc0a053b4ad70707d711aee 1193 Pfam PF04563 RNA polymerase beta subunit 28 454 3.1E-30 T 13-10-2018 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 COP00_16640 f0feac04bcc0a053b4ad70707d711aee 1193 Pfam PF00562 RNA polymerase Rpb2, domain 6 676 1069 1.6E-165 T 13-10-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, hybrid-binding domain GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 COP00_16640 f0feac04bcc0a053b4ad70707d711aee 1193 Gene3D G3DSA:3.90.1100.10 602 671 1.3E-19 T 13-10-2018 COP00_16640 f0feac04bcc0a053b4ad70707d711aee 1193 Gene3D G3DSA:3.90.1100.10 20 153 2.6E-53 T 13-10-2018 COP00_16640 f0feac04bcc0a053b4ad70707d711aee 1193 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 204 896 0.0 T 13-10-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 COP00_16640 f0feac04bcc0a053b4ad70707d711aee 1193 Gene3D G3DSA:2.40.50.150 791 930 2.7E-61 T 13-10-2018 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 COP00_16640 f0feac04bcc0a053b4ad70707d711aee 1193 Gene3D G3DSA:3.90.1110.10 154 261 3.5E-8 T 13-10-2018 IPR037034 RNA polymerase Rpb2, domain 2 superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 COP00_16640 f0feac04bcc0a053b4ad70707d711aee 1193 Gene3D G3DSA:3.90.1800.10 1057 1110 1.1E-10 T 13-10-2018 COP00_16640 f0feac04bcc0a053b4ad70707d711aee 1193 Pfam PF04561 RNA polymerase Rpb2, domain 2 370 410 7.1E-7 T 13-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 COP00_16640 f0feac04bcc0a053b4ad70707d711aee 1193 Pfam PF04561 RNA polymerase Rpb2, domain 2 140 290 1.3E-27 T 13-10-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 COP00_16640 f0feac04bcc0a053b4ad70707d711aee 1193 Pfam PF04565 RNA polymerase Rpb2, domain 3 469 537 2.2E-30 T 13-10-2018 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 COP00_18280 b51184d4f6a16a08195acc875471b8e8 3586 SUPERFAMILY SSF52777 1056 1218 1.45E-43 T 13-10-2018 COP00_18280 b51184d4f6a16a08195acc875471b8e8 3586 Pfam PF00550 Phosphopantetheine attachment site 970 1032 3.5E-13 T 13-10-2018 IPR009081 Phosphopantetheine binding ACP domain COP00_18280 b51184d4f6a16a08195acc875471b8e8 3586 Pfam PF00550 Phosphopantetheine attachment site 2016 2079 2.7E-13 T 13-10-2018 IPR009081 Phosphopantetheine binding ACP domain COP00_18280 b51184d4f6a16a08195acc875471b8e8 3586 Pfam PF00550 Phosphopantetheine attachment site 3044 3106 9.4E-14 T 13-10-2018 IPR009081 Phosphopantetheine binding ACP domain COP00_18280 b51184d4f6a16a08195acc875471b8e8 3586 TIGRFAM TIGR01720 NRPS-para261: non-ribosomal peptide synthase domain TIGR01720 3427 3576 9.5E-49 T 13-10-2018 IPR010060 Non-ribosomal peptide synthase COP00_18280 b51184d4f6a16a08195acc875471b8e8 3586 SUPERFAMILY SSF47336 2006 2113 1.57E-18 T 13-10-2018 IPR036736 ACP-like superfamily COP00_18280 b51184d4f6a16a08195acc875471b8e8 3586 SUPERFAMILY SSF52777 2273 2534 2.56E-57 T 13-10-2018 COP00_18280 b51184d4f6a16a08195acc875471b8e8 3586 ProSitePatterns PS00012 Phosphopantetheine attachment site. 2038 2053 - T 13-10-2018 IPR006162 Phosphopantetheine attachment site COP00_18280 b51184d4f6a16a08195acc875471b8e8 3586 SUPERFAMILY SSF52777 3309 3557 3.45E-35 T 13-10-2018 COP00_18280 b51184d4f6a16a08195acc875471b8e8 3586 ProSitePatterns PS00012 Phosphopantetheine attachment site. 3066 3081 - T 13-10-2018 IPR006162 Phosphopantetheine attachment site COP00_18280 b51184d4f6a16a08195acc875471b8e8 3586 Gene3D G3DSA:3.30.300.30 1901 2001 4.2E-35 T 13-10-2018 COP00_18280 b51184d4f6a16a08195acc875471b8e8 3586 Gene3D G3DSA:3.30.300.30 2930 3030 4.5E-32 T 13-10-2018 COP00_18280 b51184d4f6a16a08195acc875471b8e8 3586 SUPERFAMILY SSF56801 2508 3055 9.81E-158 T 13-10-2018 COP00_18280 b51184d4f6a16a08195acc875471b8e8 3586 Gene3D G3DSA:3.30.559.30 191 448 2.5E-129 T 13-10-2018 COP00_18280 b51184d4f6a16a08195acc875471b8e8 3586 SUPERFAMILY SSF56801 1461 2027 3.79E-156 T 13-10-2018 COP00_18280 b51184d4f6a16a08195acc875471b8e8 3586 Pfam PF00668 Condensation domain 3120 3565 7.7E-117 T 13-10-2018 IPR001242 Condensation domain COP00_18280 b51184d4f6a16a08195acc875471b8e8 3586 Pfam PF00668 Condensation domain 2097 2529 8.5E-129 T 13-10-2018 IPR001242 Condensation domain COP00_18280 b51184d4f6a16a08195acc875471b8e8 3586 Pfam PF00668 Condensation domain 7 452 1.4E-125 T 13-10-2018 IPR001242 Condensation domain COP00_18280 b51184d4f6a16a08195acc875471b8e8 3586 Pfam PF00668 Condensation domain 1051 1483 1.1E-138 T 13-10-2018 IPR001242 Condensation domain COP00_18280 b51184d4f6a16a08195acc875471b8e8 3586 Gene3D G3DSA:3.30.559.10 1059 1412 8.1E-149 T 13-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 COP00_18280 b51184d4f6a16a08195acc875471b8e8 3586 Gene3D G3DSA:1.10.1200.10 2002 2087 9.5E-24 T 13-10-2018 IPR036736 ACP-like superfamily COP00_18280 b51184d4f6a16a08195acc875471b8e8 3586 Gene3D G3DSA:1.10.1200.10 3031 3110 8.0E-26 T 13-10-2018 IPR036736 ACP-like superfamily COP00_18280 b51184d4f6a16a08195acc875471b8e8 3586 SUPERFAMILY SSF47336 959 1066 1.44E-18 T 13-10-2018 IPR036736 ACP-like superfamily COP00_18280 b51184d4f6a16a08195acc875471b8e8 3586 Gene3D G3DSA:3.30.559.10 3111 3288 6.3E-65 T 13-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 COP00_18280 b51184d4f6a16a08195acc875471b8e8 3586 SUPERFAMILY SSF52777 12 189 2.45E-44 T 13-10-2018 COP00_18280 b51184d4f6a16a08195acc875471b8e8 3586 SUPERFAMILY SSF52777 3116 3293 6.23E-39 T 13-10-2018 COP00_18280 b51184d4f6a16a08195acc875471b8e8 3586 Gene3D G3DSA:3.30.300.30 856 957 2.8E-31 T 13-10-2018 COP00_18280 b51184d4f6a16a08195acc875471b8e8 3586 SUPERFAMILY SSF56801 441 980 9.81E-155 T 13-10-2018 COP00_18280 b51184d4f6a16a08195acc875471b8e8 3586 Gene3D G3DSA:3.40.50.12780 456 855 2.7E-142 T 13-10-2018 COP00_18280 b51184d4f6a16a08195acc875471b8e8 3586 Gene3D G3DSA:3.40.50.12780 2535 2929 7.0E-132 T 13-10-2018 COP00_18280 b51184d4f6a16a08195acc875471b8e8 3586 Gene3D G3DSA:3.40.50.12780 1489 1900 4.1E-131 T 13-10-2018 COP00_18280 b51184d4f6a16a08195acc875471b8e8 3586 Pfam PF00501 AMP-binding enzyme 2550 2935 1.8E-99 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 COP00_18280 b51184d4f6a16a08195acc875471b8e8 3586 Pfam PF00501 AMP-binding enzyme 471 862 1.6E-104 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 COP00_18280 b51184d4f6a16a08195acc875471b8e8 3586 Pfam PF00501 AMP-binding enzyme 1503 1906 3.8E-103 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 COP00_18280 b51184d4f6a16a08195acc875471b8e8 3586 SUPERFAMILY SSF47336 3034 3107 6.67E-20 T 13-10-2018 IPR036736 ACP-like superfamily COP00_18280 b51184d4f6a16a08195acc875471b8e8 3586 ProSitePatterns PS00455 Putative AMP-binding domain signature. 1644 1655 - T 13-10-2018 IPR020845 AMP-binding, conserved site COP00_18280 b51184d4f6a16a08195acc875471b8e8 3586 Pfam PF13193 AMP-binding enzyme C-terminal domain 2943 3016 2.0E-9 T 13-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain COP00_18280 b51184d4f6a16a08195acc875471b8e8 3586 Pfam PF13193 AMP-binding enzyme C-terminal domain 870 941 5.0E-6 T 13-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain COP00_18280 b51184d4f6a16a08195acc875471b8e8 3586 Pfam PF13193 AMP-binding enzyme C-terminal domain 1914 1987 2.0E-11 T 13-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain COP00_18280 b51184d4f6a16a08195acc875471b8e8 3586 SUPERFAMILY SSF52777 2103 2265 2.22E-42 T 13-10-2018 COP00_18280 b51184d4f6a16a08195acc875471b8e8 3586 ProSitePatterns PS00012 Phosphopantetheine attachment site. 991 1006 - T 13-10-2018 IPR006162 Phosphopantetheine attachment site COP00_18280 b51184d4f6a16a08195acc875471b8e8 3586 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 492 885 7.7E-137 T 13-10-2018 IPR010071 Amino acid adenylation domain COP00_18280 b51184d4f6a16a08195acc875471b8e8 3586 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 1524 1930 9.4E-135 T 13-10-2018 IPR010071 Amino acid adenylation domain COP00_18280 b51184d4f6a16a08195acc875471b8e8 3586 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 2571 2959 5.1E-129 T 13-10-2018 IPR010071 Amino acid adenylation domain COP00_18280 b51184d4f6a16a08195acc875471b8e8 3586 ProSitePatterns PS00455 Putative AMP-binding domain signature. 2692 2703 - T 13-10-2018 IPR020845 AMP-binding, conserved site COP00_18280 b51184d4f6a16a08195acc875471b8e8 3586 Gene3D G3DSA:3.30.559.30 1222 1467 8.1E-149 T 13-10-2018 COP00_18280 b51184d4f6a16a08195acc875471b8e8 3586 Gene3D G3DSA:3.40.50.1820 958 1058 2.4E-25 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold COP00_18280 b51184d4f6a16a08195acc875471b8e8 3586 Gene3D G3DSA:3.30.559.30 2269 2515 1.2E-142 T 13-10-2018 COP00_18280 b51184d4f6a16a08195acc875471b8e8 3586 Gene3D G3DSA:3.30.559.10 2101 2459 1.2E-142 T 13-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 COP00_18280 b51184d4f6a16a08195acc875471b8e8 3586 SUPERFAMILY SSF52777 190 435 8.45E-46 T 13-10-2018 COP00_18280 b51184d4f6a16a08195acc875471b8e8 3586 SUPERFAMILY SSF52777 1225 1470 2.0E-59 T 13-10-2018 COP00_18280 b51184d4f6a16a08195acc875471b8e8 3586 SMART SM00823 Phosphopantetheine attachment site 967 1036 3.0E-5 T 13-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 COP00_18280 b51184d4f6a16a08195acc875471b8e8 3586 SMART SM00823 Phosphopantetheine attachment site 3042 3110 0.003 T 13-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 COP00_18280 b51184d4f6a16a08195acc875471b8e8 3586 SMART SM00823 Phosphopantetheine attachment site 2014 2083 6.6E-4 T 13-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 COP00_18280 b51184d4f6a16a08195acc875471b8e8 3586 Gene3D G3DSA:3.30.559.30 3289 3559 1.5E-66 T 13-10-2018 COP00_18280 b51184d4f6a16a08195acc875471b8e8 3586 Gene3D G3DSA:3.30.559.10 12 383 2.5E-129 T 13-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 COP00_01580 3c2110f1ff5325e2573f83c71b935487 722 SUPERFAMILY SSF52540 217 396 1.9E-54 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_01580 3c2110f1ff5325e2573f83c71b935487 722 SUPERFAMILY SSF50447 395 478 9.54E-27 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily COP00_01580 3c2110f1ff5325e2573f83c71b935487 722 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 721 17.676 T 13-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 COP00_01580 3c2110f1ff5325e2573f83c71b935487 722 Gene3D G3DSA:3.40.50.10050 517 624 6.5E-40 T 13-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily COP00_01580 3c2110f1ff5325e2573f83c71b935487 722 Gene3D G3DSA:2.40.30.10 625 722 1.6E-33 T 13-10-2018 COP00_01580 3c2110f1ff5325e2573f83c71b935487 722 Gene3D G3DSA:1.10.10.2480 1 68 8.7E-15 T 13-10-2018 COP00_01580 3c2110f1ff5325e2573f83c71b935487 722 Gene3D G3DSA:2.40.30.10 395 512 3.7E-43 T 13-10-2018 COP00_01580 3c2110f1ff5325e2573f83c71b935487 722 Pfam PF11987 Translation-initiation factor 2 509 613 3.6E-38 T 13-10-2018 IPR023115 Translation initiation factor IF- 2, domain 3 COP00_01580 3c2110f1ff5325e2573f83c71b935487 722 SUPERFAMILY SSF50447 624 721 7.69E-34 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily COP00_01580 3c2110f1ff5325e2573f83c71b935487 722 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 147 197 1.3E-15 T 13-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal COP00_01580 3c2110f1ff5325e2573f83c71b935487 722 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 1 51 5.4E-13 T 13-10-2018 IPR006847 Translation initiation factor IF-2, N-terminal COP00_01580 3c2110f1ff5325e2573f83c71b935487 722 SUPERFAMILY SSF52156 501 630 3.79E-40 T 13-10-2018 IPR036925 Translation initiation factor IF-2, domain 3 superfamily COP00_01580 3c2110f1ff5325e2573f83c71b935487 722 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 226 382 3.8E-42 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 COP00_01580 3c2110f1ff5325e2573f83c71b935487 722 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 139 721 3.2E-288 T 13-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 COP00_01580 3c2110f1ff5325e2573f83c71b935487 722 ProSitePatterns PS01176 Initiation factor 2 signature. 674 696 - T 13-10-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 COP00_01580 3c2110f1ff5325e2573f83c71b935487 722 Pfam PF00009 Elongation factor Tu GTP binding domain 228 383 2.5E-36 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 COP00_01580 3c2110f1ff5325e2573f83c71b935487 722 Gene3D G3DSA:3.40.50.300 221 394 1.1E-74 T 13-10-2018 COP00_01395 503e9a52290bccddd53bc3698cf34476 265 TIGRFAM TIGR02490 flgF: flagellar basal-body rod protein FlgF 5 244 2.8E-55 T 13-10-2018 IPR012836 Flagellar basal-body rod FlgF GO:0030694|GO:0071973 COP00_01395 503e9a52290bccddd53bc3698cf34476 265 SUPERFAMILY SSF117143 91 225 1.7E-35 T 13-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like COP00_01395 503e9a52290bccddd53bc3698cf34476 265 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 185 263 6.1E-24 T 13-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain COP00_01395 503e9a52290bccddd53bc3698cf34476 265 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 13-10-2018 IPR019776 Flagellar basal body rod protein, conserved site COP00_01395 503e9a52290bccddd53bc3698cf34476 265 Pfam PF00460 Flagella basal body rod protein 5 35 5.6E-12 T 13-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 COP00_01395 503e9a52290bccddd53bc3698cf34476 265 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 3 139 2.3E-38 T 13-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G COP00_01395 503e9a52290bccddd53bc3698cf34476 265 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 151 246 9.9E-30 T 13-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G COP00_08250 d313e726572ad1ef244a103146c2e503 170 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 3 170 1.3E-70 T 13-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 COP00_08250 d313e726572ad1ef244a103146c2e503 170 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 3 170 38.156 T 13-10-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 COP00_08250 d313e726572ad1ef244a103146c2e503 170 SUPERFAMILY SSF53271 2 163 1.31E-48 T 13-10-2018 IPR029057 Phosphoribosyltransferase-like COP00_08250 d313e726572ad1ef244a103146c2e503 170 Pfam PF00156 Phosphoribosyl transferase domain 39 148 1.3E-14 T 13-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 COP00_08250 d313e726572ad1ef244a103146c2e503 170 Gene3D G3DSA:3.40.50.2020 1 170 7.7E-59 T 13-10-2018 COP00_09400 1a635011edd7de30800420f09c51a348 201 Gene3D G3DSA:3.30.1940.10 18 92 6.8E-72 T 13-10-2018 IPR037154 YtpR-like superfamily COP00_09400 1a635011edd7de30800420f09c51a348 201 Pfam PF01588 Putative tRNA binding domain 96 197 1.8E-26 T 13-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 COP00_09400 1a635011edd7de30800420f09c51a348 201 Pfam PF14794 Domain of unknown function (DUF4479) 23 91 1.1E-24 T 13-10-2018 IPR027855 Domain of unknown function DUF4479 COP00_09400 1a635011edd7de30800420f09c51a348 201 SUPERFAMILY SSF50249 92 199 5.14E-32 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold COP00_09400 1a635011edd7de30800420f09c51a348 201 Gene3D G3DSA:2.40.50.140 5 199 6.8E-72 T 13-10-2018 COP00_05705 1fd60bf36557b0f1a8f759055fc4613c 92 SMART SM00411 1 90 1.2E-53 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 COP00_05705 1fd60bf36557b0f1a8f759055fc4613c 92 Pfam PF00216 Bacterial DNA-binding protein 1 89 1.2E-38 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 COP00_05705 1fd60bf36557b0f1a8f759055fc4613c 92 Gene3D G3DSA:4.10.520.10 1 90 2.3E-41 T 13-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 COP00_05705 1fd60bf36557b0f1a8f759055fc4613c 92 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 13-10-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 COP00_05705 1fd60bf36557b0f1a8f759055fc4613c 92 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 2.6E-22 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 COP00_05705 1fd60bf36557b0f1a8f759055fc4613c 92 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 2.6E-22 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 COP00_05705 1fd60bf36557b0f1a8f759055fc4613c 92 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 2.6E-22 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 COP00_05705 1fd60bf36557b0f1a8f759055fc4613c 92 SUPERFAMILY SSF47729 1 90 1.62E-36 T 13-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 COP00_15300 905fff1f8abb860dd2b2642efe6a39c8 487 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 8 481 8.5E-180 T 13-10-2018 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00640+1.2.1.27|MetaCyc: PWY-5642|Reactome: R-HSA-70895 COP00_15300 905fff1f8abb860dd2b2642efe6a39c8 487 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 277 288 - T 13-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 COP00_15300 905fff1f8abb860dd2b2642efe6a39c8 487 Gene3D G3DSA:3.40.605.10 22 458 3.1E-166 T 13-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 COP00_15300 905fff1f8abb860dd2b2642efe6a39c8 487 SUPERFAMILY SSF53720 4 481 3.14E-153 T 13-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 COP00_15300 905fff1f8abb860dd2b2642efe6a39c8 487 Hamap MF_01670 Malonate-semialdehyde dehydrogenase [iolA]. 1 481 73.902 T 13-10-2018 IPR023510 Methylmalonate-semialdehyde dehydrogenase, Gram-positive bacteria GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00640+1.2.1.27|MetaCyc: PWY-5642 COP00_15300 905fff1f8abb860dd2b2642efe6a39c8 487 Gene3D G3DSA:3.40.309.10 252 450 3.1E-166 T 13-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 COP00_15300 905fff1f8abb860dd2b2642efe6a39c8 487 Pfam PF00171 Aldehyde dehydrogenase family 15 477 1.7E-158 T 13-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 COP00_14015 a3b14f72c00417f661e71d931432be36 285 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 183 208 - T 13-10-2018 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 COP00_14015 a3b14f72c00417f661e71d931432be36 285 PIRSF PIRSF000105 1 285 1.1E-88 T 13-10-2018 IPR022694 3-hydroxyacyl-CoA dehydrogenase GO:0003857|GO:0006631|GO:0055114|GO:0070403 COP00_14015 a3b14f72c00417f661e71d931432be36 285 SUPERFAMILY SSF51735 3 185 3.53E-57 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily COP00_14015 a3b14f72c00417f661e71d931432be36 285 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 186 282 3.0E-37 T 13-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 COP00_14015 a3b14f72c00417f661e71d931432be36 285 Gene3D G3DSA:1.10.1040.10 189 285 3.1E-36 T 13-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 COP00_14015 a3b14f72c00417f661e71d931432be36 285 SUPERFAMILY SSF48179 185 284 1.96E-34 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 COP00_14015 a3b14f72c00417f661e71d931432be36 285 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 6 183 2.9E-65 T 13-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 COP00_14015 a3b14f72c00417f661e71d931432be36 285 Gene3D G3DSA:3.40.50.720 4 188 5.8E-69 T 13-10-2018 COP00_05060 5bca0d674003083ede94bd401facc1e8 56 ProDom PD052277 YOZD 1 56 4.0E-22 T 13-10-2018 COP00_05060 5bca0d674003083ede94bd401facc1e8 56 Pfam PF14162 YozD-like protein 2 56 4.4E-30 T 13-10-2018 IPR025545 YozD-like protein COP00_16830 c5197a33b8d14345f6d07e24fc8b2828 281 Pfam PF00005 ABC transporter 25 171 2.2E-36 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 COP00_16830 c5197a33b8d14345f6d07e24fc8b2828 281 SMART SM00382 34 219 2.5E-18 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_16830 c5197a33b8d14345f6d07e24fc8b2828 281 Gene3D G3DSA:3.40.50.300 3 278 7.4E-83 T 13-10-2018 COP00_16830 c5197a33b8d14345f6d07e24fc8b2828 281 SUPERFAMILY SSF52540 6 235 1.57E-67 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_16830 c5197a33b8d14345f6d07e24fc8b2828 281 TIGRFAM TIGR04520 ECF_ATPase_1: energy-coupling factor transporter ATPase 7 275 3.3E-120 T 13-10-2018 IPR030947 Energy-coupling factor transporter ATP-binding protein EcfA1 COP00_16830 c5197a33b8d14345f6d07e24fc8b2828 281 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 COP00_07310 629a5e387af3eb221c949a191bcfa044 375 ProSitePatterns PS00636 Nt-dnaJ domain signature. 46 65 - T 13-10-2018 IPR018253 DnaJ domain, conserved site COP00_07310 629a5e387af3eb221c949a191bcfa044 375 SMART SM00271 4 61 2.2E-30 T 13-10-2018 IPR001623 DnaJ domain COP00_07310 629a5e387af3eb221c949a191bcfa044 375 SUPERFAMILY SSF46565 1 101 3.66E-36 T 13-10-2018 IPR036869 Chaperone J-domain superfamily COP00_07310 629a5e387af3eb221c949a191bcfa044 375 Gene3D G3DSA:2.60.260.20 115 251 7.0E-36 T 13-10-2018 COP00_07310 629a5e387af3eb221c949a191bcfa044 375 Gene3D G3DSA:1.10.287.110 1 110 9.3E-39 T 13-10-2018 IPR036869 Chaperone J-domain superfamily COP00_07310 629a5e387af3eb221c949a191bcfa044 375 SUPERFAMILY SSF57938 132 213 9.81E-19 T 13-10-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily COP00_07310 629a5e387af3eb221c949a191bcfa044 375 Pfam PF00226 DnaJ domain 5 66 1.1E-26 T 13-10-2018 IPR001623 DnaJ domain COP00_07310 629a5e387af3eb221c949a191bcfa044 375 Gene3D G3DSA:2.10.230.10 145 209 7.0E-36 T 13-10-2018 COP00_07310 629a5e387af3eb221c949a191bcfa044 375 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 371 41.372 T 13-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 COP00_07310 629a5e387af3eb221c949a191bcfa044 375 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 351 1.9E-140 T 13-10-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 COP00_07310 629a5e387af3eb221c949a191bcfa044 375 PRINTS PR00625 DnaJ domain signature 25 40 1.3E-30 T 13-10-2018 IPR001623 DnaJ domain COP00_07310 629a5e387af3eb221c949a191bcfa044 375 PRINTS PR00625 DnaJ domain signature 7 25 1.3E-30 T 13-10-2018 IPR001623 DnaJ domain COP00_07310 629a5e387af3eb221c949a191bcfa044 375 PRINTS PR00625 DnaJ domain signature 61 80 1.3E-30 T 13-10-2018 IPR001623 DnaJ domain COP00_07310 629a5e387af3eb221c949a191bcfa044 375 PRINTS PR00625 DnaJ domain signature 41 61 1.3E-30 T 13-10-2018 IPR001623 DnaJ domain COP00_07310 629a5e387af3eb221c949a191bcfa044 375 SUPERFAMILY SSF49493 260 346 5.76E-25 T 13-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 COP00_07310 629a5e387af3eb221c949a191bcfa044 375 SUPERFAMILY SSF49493 112 259 9.42E-20 T 13-10-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 COP00_07310 629a5e387af3eb221c949a191bcfa044 375 Pfam PF00684 DnaJ central domain 145 209 3.6E-13 T 13-10-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 COP00_07310 629a5e387af3eb221c949a191bcfa044 375 Gene3D G3DSA:2.60.260.20 255 335 9.8E-31 T 13-10-2018 COP00_07310 629a5e387af3eb221c949a191bcfa044 375 Pfam PF01556 DnaJ C terminal domain 118 335 9.9E-45 T 13-10-2018 IPR002939 Chaperone DnaJ, C-terminal COP00_00895 c9eb62d0bf3fe691bac67c5508ef2686 502 Pfam PF05922 Peptidase inhibitor I9 57 166 1.6E-8 T 13-10-2018 IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 Reactome: R-HSA-381426|Reactome: R-HSA-8866427|Reactome: R-HSA-8957275|Reactome: R-HSA-8964038 COP00_00895 c9eb62d0bf3fe691bac67c5508ef2686 502 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 260 270 - T 13-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site COP00_00895 c9eb62d0bf3fe691bac67c5508ef2686 502 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 435 445 - T 13-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site COP00_00895 c9eb62d0bf3fe691bac67c5508ef2686 502 PRINTS PR00723 Subtilisin serine protease family (S8) signature 434 450 2.5E-18 T 13-10-2018 IPR015500 Peptidase S8, subtilisin-related COP00_00895 c9eb62d0bf3fe691bac67c5508ef2686 502 PRINTS PR00723 Subtilisin serine protease family (S8) signature 204 223 2.5E-18 T 13-10-2018 IPR015500 Peptidase S8, subtilisin-related COP00_00895 c9eb62d0bf3fe691bac67c5508ef2686 502 PRINTS PR00723 Subtilisin serine protease family (S8) signature 256 269 2.5E-18 T 13-10-2018 IPR015500 Peptidase S8, subtilisin-related COP00_00895 c9eb62d0bf3fe691bac67c5508ef2686 502 Gene3D G3DSA:3.40.50.200 175 502 4.4E-86 T 13-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 COP00_00895 c9eb62d0bf3fe691bac67c5508ef2686 502 Pfam PF00082 Subtilase family 204 489 1.1E-57 T 13-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 COP00_00895 c9eb62d0bf3fe691bac67c5508ef2686 502 SUPERFAMILY SSF52743 188 499 1.83E-77 T 13-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 COP00_15210 d81a6b0a4cd0b01e2b88aaa03aef31ca 282 SMART SM00267 120 282 1.4E-29 T 13-10-2018 IPR000160 GGDEF domain COP00_15210 d81a6b0a4cd0b01e2b88aaa03aef31ca 282 Gene3D G3DSA:3.30.70.270 133 281 1.1E-21 T 13-10-2018 COP00_15210 d81a6b0a4cd0b01e2b88aaa03aef31ca 282 Pfam PF00990 Diguanylate cyclase, GGDEF domain 132 277 3.2E-28 T 13-10-2018 IPR000160 GGDEF domain COP00_15210 d81a6b0a4cd0b01e2b88aaa03aef31ca 282 SUPERFAMILY SSF55073 137 274 1.26E-18 T 13-10-2018 IPR029787 Nucleotide cyclase COP00_15210 d81a6b0a4cd0b01e2b88aaa03aef31ca 282 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 131 276 3.0E-17 T 13-10-2018 IPR000160 GGDEF domain COP00_21090 15747408cef28cdd28b235b1d7d9b4f2 194 SUPERFAMILY SSF55469 11 191 8.38E-39 T 13-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 COP00_21090 15747408cef28cdd28b235b1d7d9b4f2 194 PIRSF PIRSF000232 7 194 2.3E-46 T 13-10-2018 IPR026021 Putative NAD(P)H nitroreductase YdjA-like COP00_21090 15747408cef28cdd28b235b1d7d9b4f2 194 Pfam PF00881 Nitroreductase family 16 173 1.6E-28 T 13-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 COP00_21090 15747408cef28cdd28b235b1d7d9b4f2 194 Gene3D G3DSA:3.40.109.10 5 192 3.2E-43 T 13-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 COP00_13070 a08349f2327daf79a88390058348ea1c 310 Pfam PF00669 Bacterial flagellin N-terminal helical region 3 141 4.6E-46 T 13-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 COP00_13070 a08349f2327daf79a88390058348ea1c 310 Gene3D G3DSA:1.10.8.410 262 310 3.1E-29 T 13-10-2018 COP00_13070 a08349f2327daf79a88390058348ea1c 310 SUPERFAMILY SSF64518 1 310 1.31E-95 T 13-10-2018 COP00_13070 a08349f2327daf79a88390058348ea1c 310 Pfam PF00700 Bacterial flagellin C-terminal helical region 225 309 8.0E-33 T 13-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 COP00_13070 a08349f2327daf79a88390058348ea1c 310 PRINTS PR00207 Flagellin signature 35 52 2.2E-25 T 13-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 COP00_13070 a08349f2327daf79a88390058348ea1c 310 PRINTS PR00207 Flagellin signature 74 93 2.2E-25 T 13-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 COP00_13070 a08349f2327daf79a88390058348ea1c 310 PRINTS PR00207 Flagellin signature 110 133 2.2E-25 T 13-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 COP00_13070 a08349f2327daf79a88390058348ea1c 310 Gene3D G3DSA:1.20.1330.10 53 261 2.8E-60 T 13-10-2018 COP00_01310 e3dfaf664d91286eb0ad03100df31e7e 691 SMART SM00436 104 192 2.1E-52 T 13-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 COP00_01310 e3dfaf664d91286eb0ad03100df31e7e 691 Hamap MF_00952 DNA topoisomerase 1 [topA]. 3 642 55.982 T 13-10-2018 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 COP00_01310 e3dfaf664d91286eb0ad03100df31e7e 691 SMART SM00437 242 510 3.6E-137 T 13-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 COP00_01310 e3dfaf664d91286eb0ad03100df31e7e 691 Gene3D G3DSA:3.30.65.10 559 618 3.1E-15 T 13-10-2018 COP00_01310 e3dfaf664d91286eb0ad03100df31e7e 691 Pfam PF01751 Toprim domain 5 113 1.7E-29 T 13-10-2018 IPR006171 TOPRIM domain COP00_01310 e3dfaf664d91286eb0ad03100df31e7e 691 Gene3D G3DSA:2.70.20.10 184 457 2.7E-169 T 13-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 COP00_01310 e3dfaf664d91286eb0ad03100df31e7e 691 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 370 386 2.2E-37 T 13-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 COP00_01310 e3dfaf664d91286eb0ad03100df31e7e 691 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 473 487 2.2E-37 T 13-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 COP00_01310 e3dfaf664d91286eb0ad03100df31e7e 691 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 77 90 2.2E-37 T 13-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 COP00_01310 e3dfaf664d91286eb0ad03100df31e7e 691 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 293 302 2.2E-37 T 13-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 COP00_01310 e3dfaf664d91286eb0ad03100df31e7e 691 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 162 180 2.2E-37 T 13-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 COP00_01310 e3dfaf664d91286eb0ad03100df31e7e 691 Gene3D G3DSA:3.40.50.140 1 134 1.1E-53 T 13-10-2018 COP00_01310 e3dfaf664d91286eb0ad03100df31e7e 691 SUPERFAMILY SSF57783 568 613 3.23E-15 T 13-10-2018 COP00_01310 e3dfaf664d91286eb0ad03100df31e7e 691 Gene3D G3DSA:1.10.290.10 250 385 2.7E-169 T 13-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 COP00_01310 e3dfaf664d91286eb0ad03100df31e7e 691 Pfam PF01131 DNA topoisomerase 128 547 2.1E-139 T 13-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 COP00_01310 e3dfaf664d91286eb0ad03100df31e7e 691 SMART SM00493 3 103 2.2E-31 T 13-10-2018 IPR006171 TOPRIM domain COP00_01310 e3dfaf664d91286eb0ad03100df31e7e 691 Gene3D G3DSA:1.10.460.10 135 550 2.7E-169 T 13-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 COP00_01310 e3dfaf664d91286eb0ad03100df31e7e 691 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 658 684 0.0083 T 13-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 COP00_01310 e3dfaf664d91286eb0ad03100df31e7e 691 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 577 613 1.7E-16 T 13-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 COP00_01310 e3dfaf664d91286eb0ad03100df31e7e 691 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 616 655 1.7E-13 T 13-10-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 COP00_01310 e3dfaf664d91286eb0ad03100df31e7e 691 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 279 302 - T 13-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 COP00_01310 e3dfaf664d91286eb0ad03100df31e7e 691 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 5 611 8.3E-274 T 13-10-2018 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 COP00_01310 e3dfaf664d91286eb0ad03100df31e7e 691 SUPERFAMILY SSF56712 4 589 8.5E-202 T 13-10-2018 IPR023405 DNA topoisomerase, type IA, core domain COP00_05365 215c8e6c6cccb21cb2150b3e586ab851 194 Gene3D G3DSA:3.40.50.2020 3 188 2.4E-53 T 13-10-2018 COP00_05365 215c8e6c6cccb21cb2150b3e586ab851 194 SUPERFAMILY SSF53271 1 189 1.56E-46 T 13-10-2018 IPR029057 Phosphoribosyltransferase-like COP00_05365 215c8e6c6cccb21cb2150b3e586ab851 194 TIGRFAM TIGR01744 XPRTase: xanthine phosphoribosyltransferase 1 191 7.7E-91 T 13-10-2018 IPR010079 Xanthine phosphoribosyltransferase GO:0016763|GO:0043101|GO:0046110 KEGG: 00230+2.4.2.22 COP00_05365 215c8e6c6cccb21cb2150b3e586ab851 194 Hamap MF_01184 Xanthine phosphoribosyltransferase [xpt]. 1 189 41.564 T 13-10-2018 IPR010079 Xanthine phosphoribosyltransferase GO:0016763|GO:0043101|GO:0046110 KEGG: 00230+2.4.2.22 COP00_05365 215c8e6c6cccb21cb2150b3e586ab851 194 Pfam PF00156 Phosphoribosyl transferase domain 32 157 2.9E-9 T 13-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 COP00_23210 59143210fcc05540a6c1076ed47698d2 295 Pfam PF03466 LysR substrate binding domain 88 291 1.3E-44 T 13-10-2018 IPR005119 LysR, substrate-binding COP00_23210 59143210fcc05540a6c1076ed47698d2 295 SUPERFAMILY SSF46785 2 87 1.72E-20 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_23210 59143210fcc05540a6c1076ed47698d2 295 Gene3D G3DSA:3.40.190.290 91 294 5.1E-43 T 13-10-2018 COP00_23210 59143210fcc05540a6c1076ed47698d2 295 SUPERFAMILY SSF53850 89 291 5.43E-39 T 13-10-2018 COP00_23210 59143210fcc05540a6c1076ed47698d2 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 7.6E-7 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 COP00_23210 59143210fcc05540a6c1076ed47698d2 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 7.6E-7 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 COP00_23210 59143210fcc05540a6c1076ed47698d2 295 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 7.6E-7 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 COP00_23210 59143210fcc05540a6c1076ed47698d2 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 1.1E-16 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 COP00_23210 59143210fcc05540a6c1076ed47698d2 295 Gene3D G3DSA:1.10.10.10 1 90 1.3E-22 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_16715 5d90c9c36d25e4891fa4f6ba0b6ba01e 144 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 59 70 - T 13-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 COP00_16715 5d90c9c36d25e4891fa4f6ba0b6ba01e 144 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 127 8.8E-64 T 13-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_16715 5d90c9c36d25e4891fa4f6ba0b6ba01e 144 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 82 93 - T 13-10-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 COP00_16715 5d90c9c36d25e4891fa4f6ba0b6ba01e 144 SUPERFAMILY SSF54686 1 137 3.66E-59 T 13-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 COP00_16715 5d90c9c36d25e4891fa4f6ba0b6ba01e 144 Pfam PF00252 Ribosomal protein L16p/L10e 4 132 4.0E-53 T 13-10-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 COP00_16715 5d90c9c36d25e4891fa4f6ba0b6ba01e 144 PRINTS PR00060 Ribosomal protein L16 signature 24 36 8.4E-41 T 13-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_16715 5d90c9c36d25e4891fa4f6ba0b6ba01e 144 PRINTS PR00060 Ribosomal protein L16 signature 58 87 8.4E-41 T 13-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_16715 5d90c9c36d25e4891fa4f6ba0b6ba01e 144 PRINTS PR00060 Ribosomal protein L16 signature 42 53 8.4E-41 T 13-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_16715 5d90c9c36d25e4891fa4f6ba0b6ba01e 144 PRINTS PR00060 Ribosomal protein L16 signature 88 117 8.4E-41 T 13-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_16715 5d90c9c36d25e4891fa4f6ba0b6ba01e 144 Gene3D G3DSA:3.90.1170.10 1 143 1.5E-55 T 13-10-2018 IPR036920 Ribosomal protein L10e/L16 superfamily GO:0003735|GO:0005840|GO:0006412 COP00_16715 5d90c9c36d25e4891fa4f6ba0b6ba01e 144 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 134 41.384 T 13-10-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_02390 f3080d789865ad33496690545c03bfb4 63 TIGRFAM TIGR01669 phage_XkdX: phage uncharacterized protein, XkdX family 1 46 3.8E-12 T 13-10-2018 IPR010022 Protein of unknown function XkdX COP00_02390 f3080d789865ad33496690545c03bfb4 63 Pfam PF09693 Phage uncharacterised protein (Phage_XkdX) 6 46 1.3E-15 T 13-10-2018 IPR010022 Protein of unknown function XkdX COP00_00620 133ee5e0bdd045aca7f8087ea6ba3f3d 612 SMART SM00838 397 485 4.0E-5 T 13-10-2018 IPR000640 Elongation factor EFG, domain V-like COP00_00620 133ee5e0bdd045aca7f8087ea6ba3f3d 612 Pfam PF00679 Elongation factor G C-terminus 399 479 7.6E-25 T 13-10-2018 IPR000640 Elongation factor EFG, domain V-like COP00_00620 133ee5e0bdd045aca7f8087ea6ba3f3d 612 SUPERFAMILY SSF54980 400 515 7.67E-29 T 13-10-2018 IPR035647 EF-G domain III/V-like COP00_00620 133ee5e0bdd045aca7f8087ea6ba3f3d 612 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 8 146 6.7E-23 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 COP00_00620 133ee5e0bdd045aca7f8087ea6ba3f3d 612 Gene3D G3DSA:3.40.50.300 4 200 6.2E-68 T 13-10-2018 COP00_00620 133ee5e0bdd045aca7f8087ea6ba3f3d 612 Gene3D G3DSA:2.40.50.250 485 601 5.6E-129 T 13-10-2018 COP00_00620 133ee5e0bdd045aca7f8087ea6ba3f3d 612 Gene3D G3DSA:2.40.30.10 201 301 2.7E-34 T 13-10-2018 COP00_00620 133ee5e0bdd045aca7f8087ea6ba3f3d 612 SUPERFAMILY SSF50447 154 301 1.95E-32 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily COP00_00620 133ee5e0bdd045aca7f8087ea6ba3f3d 612 SUPERFAMILY SSF52540 3 208 7.06E-57 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_00620 133ee5e0bdd045aca7f8087ea6ba3f3d 612 SUPERFAMILY SSF54980 304 389 1.69E-15 T 13-10-2018 IPR035647 EF-G domain III/V-like COP00_00620 133ee5e0bdd045aca7f8087ea6ba3f3d 612 Gene3D G3DSA:3.30.70.240 391 484 5.6E-129 T 13-10-2018 COP00_00620 133ee5e0bdd045aca7f8087ea6ba3f3d 612 Pfam PF03144 Elongation factor Tu domain 2 221 291 2.3E-13 T 13-10-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 COP00_00620 133ee5e0bdd045aca7f8087ea6ba3f3d 612 PRINTS PR00315 GTP-binding elongation factor signature 89 100 2.6E-14 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 COP00_00620 133ee5e0bdd045aca7f8087ea6ba3f3d 612 PRINTS PR00315 GTP-binding elongation factor signature 9 22 2.6E-14 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 COP00_00620 133ee5e0bdd045aca7f8087ea6ba3f3d 612 PRINTS PR00315 GTP-binding elongation factor signature 53 61 2.6E-14 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 COP00_00620 133ee5e0bdd045aca7f8087ea6ba3f3d 612 PRINTS PR00315 GTP-binding elongation factor signature 125 134 2.6E-14 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 COP00_00620 133ee5e0bdd045aca7f8087ea6ba3f3d 612 PRINTS PR00315 GTP-binding elongation factor signature 73 83 2.6E-14 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 COP00_00620 133ee5e0bdd045aca7f8087ea6ba3f3d 612 Pfam PF00009 Elongation factor Tu GTP binding domain 6 198 9.5E-58 T 13-10-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 COP00_00620 133ee5e0bdd045aca7f8087ea6ba3f3d 612 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 46 61 - T 13-10-2018 IPR031157 Tr-type G domain, conserved site COP00_00620 133ee5e0bdd045aca7f8087ea6ba3f3d 612 Pfam PF14492 Elongation Factor G, domain II 330 382 8.7E-7 T 13-10-2018 COP00_00620 133ee5e0bdd045aca7f8087ea6ba3f3d 612 Gene3D G3DSA:3.30.70.870 308 592 5.6E-129 T 13-10-2018 COP00_00620 133ee5e0bdd045aca7f8087ea6ba3f3d 612 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 7 601 5.4E-291 T 13-10-2018 IPR006298 GTP-binding protein TypA GO:0005525 COP00_00825 b17650b8a44d5278b81a317f1381867e 716 Gene3D G3DSA:3.40.710.10 233 586 1.0E-99 T 13-10-2018 COP00_00825 b17650b8a44d5278b81a317f1381867e 716 SUPERFAMILY SSF56601 191 588 3.07E-93 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like COP00_00825 b17650b8a44d5278b81a317f1381867e 716 Gene3D G3DSA:2.20.70.70 55 224 9.7E-56 T 13-10-2018 COP00_00825 b17650b8a44d5278b81a317f1381867e 716 SUPERFAMILY SSF54184 601 657 1.31E-14 T 13-10-2018 COP00_00825 b17650b8a44d5278b81a317f1381867e 716 Gene3D G3DSA:3.30.70.2110 79 161 9.7E-56 T 13-10-2018 COP00_00825 b17650b8a44d5278b81a317f1381867e 716 Gene3D G3DSA:3.30.10.20 597 656 2.6E-6 T 13-10-2018 COP00_00825 b17650b8a44d5278b81a317f1381867e 716 SMART SM00740 598 658 3.6E-11 T 13-10-2018 IPR005543 PASTA domain COP00_00825 b17650b8a44d5278b81a317f1381867e 716 SMART SM00740 659 715 2.7E-6 T 13-10-2018 IPR005543 PASTA domain COP00_00825 b17650b8a44d5278b81a317f1381867e 716 SUPERFAMILY SSF56519 56 239 1.83E-45 T 13-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 COP00_00825 b17650b8a44d5278b81a317f1381867e 716 Gene3D G3DSA:3.90.1310.10 60 206 9.7E-56 T 13-10-2018 COP00_00825 b17650b8a44d5278b81a317f1381867e 716 Pfam PF03717 Penicillin-binding Protein dimerisation domain 58 221 3.8E-21 T 13-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 COP00_00825 b17650b8a44d5278b81a317f1381867e 716 Pfam PF03793 PASTA domain 602 655 2.1E-11 T 13-10-2018 IPR005543 PASTA domain COP00_00825 b17650b8a44d5278b81a317f1381867e 716 Pfam PF03793 PASTA domain 660 713 2.6E-9 T 13-10-2018 IPR005543 PASTA domain COP00_00825 b17650b8a44d5278b81a317f1381867e 716 SUPERFAMILY SSF54184 659 714 1.02E-13 T 13-10-2018 COP00_00825 b17650b8a44d5278b81a317f1381867e 716 Pfam PF00905 Penicillin binding protein transpeptidase domain 266 577 1.6E-88 T 13-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 COP00_15880 514b832c31bd0f4caa05fbb13baac9b2 253 Gene3D G3DSA:3.40.50.300 1 253 1.3E-83 T 13-10-2018 COP00_15880 514b832c31bd0f4caa05fbb13baac9b2 253 PRINTS PR00091 Nitrogenase component II signature 31 46 8.7E-5 T 13-10-2018 COP00_15880 514b832c31bd0f4caa05fbb13baac9b2 253 PRINTS PR00091 Nitrogenase component II signature 9 22 8.7E-5 T 13-10-2018 COP00_15880 514b832c31bd0f4caa05fbb13baac9b2 253 PIRSF PIRSF009320 2 85 2.3E-15 T 13-10-2018 COP00_15880 514b832c31bd0f4caa05fbb13baac9b2 253 PIRSF PIRSF009320 88 251 2.1E-7 T 13-10-2018 COP00_15880 514b832c31bd0f4caa05fbb13baac9b2 253 SUPERFAMILY SSF52540 2 251 6.79E-72 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_15880 514b832c31bd0f4caa05fbb13baac9b2 253 Pfam PF13614 AAA domain 2 178 3.4E-73 T 13-10-2018 IPR025669 AAA domain COP00_01295 be29dff638b09dab5adb278f11c817fb 386 Hamap MF_00558 Succinate--CoA ligase [ADP-forming] subunit beta [sucC]. 1 386 45.639 T 13-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 COP00_01295 be29dff638b09dab5adb278f11c817fb 386 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 385 2.9E-168 T 13-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 COP00_01295 be29dff638b09dab5adb278f11c817fb 386 SUPERFAMILY SSF56059 1 238 3.16E-86 T 13-10-2018 COP00_01295 be29dff638b09dab5adb278f11c817fb 386 Pfam PF08442 ATP-grasp domain 2 203 3.6E-85 T 13-10-2018 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 COP00_01295 be29dff638b09dab5adb278f11c817fb 386 Gene3D G3DSA:3.30.1490.20 21 104 1.1E-97 T 13-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 COP00_01295 be29dff638b09dab5adb278f11c817fb 386 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 257 282 - T 13-10-2018 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 COP00_01295 be29dff638b09dab5adb278f11c817fb 386 SUPERFAMILY SSF52210 239 386 1.2E-54 T 13-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 COP00_01295 be29dff638b09dab5adb278f11c817fb 386 PIRSF PIRSF001554 1 386 4.9E-157 T 13-10-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 COP00_01295 be29dff638b09dab5adb278f11c817fb 386 Gene3D G3DSA:3.40.50.261 240 386 3.1E-57 T 13-10-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 COP00_01295 be29dff638b09dab5adb278f11c817fb 386 Pfam PF00549 CoA-ligase 262 381 5.5E-26 T 13-10-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 COP00_01295 be29dff638b09dab5adb278f11c817fb 386 Gene3D G3DSA:3.30.470.20 1 234 1.1E-97 T 13-10-2018 COP00_21975 793cbc588c0412d75c20e376fb7c9b01 584 Pfam PF00664 ABC transporter transmembrane region 20 292 5.3E-45 T 13-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 COP00_21975 793cbc588c0412d75c20e376fb7c9b01 584 SUPERFAMILY SSF52540 329 572 1.38E-81 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_21975 793cbc588c0412d75c20e376fb7c9b01 584 SUPERFAMILY SSF90123 8 326 1.57E-72 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 COP00_21975 793cbc588c0412d75c20e376fb7c9b01 584 ProSitePatterns PS00211 ABC transporters family signature. 474 488 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 COP00_21975 793cbc588c0412d75c20e376fb7c9b01 584 Gene3D G3DSA:1.20.1560.10 3 320 1.1E-78 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 COP00_21975 793cbc588c0412d75c20e376fb7c9b01 584 SMART SM00382 362 548 8.3E-15 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_21975 793cbc588c0412d75c20e376fb7c9b01 584 Gene3D G3DSA:3.40.50.300 329 579 8.9E-83 T 13-10-2018 COP00_21975 793cbc588c0412d75c20e376fb7c9b01 584 Pfam PF00005 ABC transporter 353 500 2.5E-30 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 COP00_10320 66ac7c6f2020f928a1377962a45ad122 387 Gene3D G3DSA:3.40.50.1970 1 184 9.6E-58 T 13-10-2018 COP00_10320 66ac7c6f2020f928a1377962a45ad122 387 Gene3D G3DSA:1.20.1090.10 185 386 1.8E-46 T 13-10-2018 COP00_10320 66ac7c6f2020f928a1377962a45ad122 387 SUPERFAMILY SSF56796 2 385 7.07E-118 T 13-10-2018 COP00_10320 66ac7c6f2020f928a1377962a45ad122 387 Pfam PF00465 Iron-containing alcohol dehydrogenase 9 369 7.4E-103 T 13-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 COP00_10320 66ac7c6f2020f928a1377962a45ad122 387 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 173 201 - T 13-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 COP00_10320 66ac7c6f2020f928a1377962a45ad122 387 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 264 284 - T 13-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 COP00_21625 6878472f5c925b9ea0fb488767a79f3e 303 SUPERFAMILY SSF55120 76 296 3.36E-69 T 13-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 COP00_21625 6878472f5c925b9ea0fb488767a79f3e 303 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 134 148 - T 13-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 COP00_21625 6878472f5c925b9ea0fb488767a79f3e 303 Pfam PF00849 RNA pseudouridylate synthase 91 244 3.8E-35 T 13-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 COP00_21625 6878472f5c925b9ea0fb488767a79f3e 303 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 16 297 1.1E-84 T 13-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 COP00_21625 6878472f5c925b9ea0fb488767a79f3e 303 Gene3D G3DSA:3.30.2350.10 83 301 2.9E-71 T 13-10-2018 COP00_01625 42ebda9888ecbc7c622a7a4bcd9caa20 85 SUPERFAMILY SSF50346 1 75 2.2E-12 T 13-10-2018 IPR011033 PRC-barrel-like superfamily COP00_01625 42ebda9888ecbc7c622a7a4bcd9caa20 85 Gene3D G3DSA:2.30.30.240 1 79 7.4E-9 T 13-10-2018 COP00_01625 42ebda9888ecbc7c622a7a4bcd9caa20 85 TIGRFAM TIGR02888 spore_YlmC_YmxH: sporulation protein, YlmC/YmxH family 2 76 1.3E-29 T 13-10-2018 IPR014238 Sporulation protein YlmC/YmxH COP00_01625 42ebda9888ecbc7c622a7a4bcd9caa20 85 Pfam PF05239 PRC-barrel domain 1 79 3.3E-15 T 13-10-2018 IPR027275 PRC-barrel domain COP00_08480 59f5448694f5e792795d622a11c0427d 226 SUPERFAMILY SSF102712 148 195 2.22E-5 T 13-10-2018 COP00_08480 59f5448694f5e792795d622a11c0427d 226 Gene3D G3DSA:1.10.150.20 49 89 1.0E-7 T 13-10-2018 COP00_08480 59f5448694f5e792795d622a11c0427d 226 Gene3D G3DSA:3.40.140.10 102 226 1.7E-47 T 13-10-2018 COP00_08480 59f5448694f5e792795d622a11c0427d 226 TIGRFAM TIGR00608 radc: DNA repair protein RadC 13 226 2.2E-89 T 13-10-2018 IPR001405 Uncharacterised protein family UPF0758 COP00_08480 59f5448694f5e792795d622a11c0427d 226 SUPERFAMILY SSF47781 17 93 1.39E-9 T 13-10-2018 IPR010994 RuvA domain 2-like COP00_08480 59f5448694f5e792795d622a11c0427d 226 Pfam PF04002 RadC-like JAB domain 107 224 5.9E-48 T 13-10-2018 IPR025657 RadC-like JAB domain COP00_08480 59f5448694f5e792795d622a11c0427d 226 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 175 180 - T 13-10-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site COP00_20160 a510edfabbb4799fd4750b7642769b5f 513 Pfam PF02540 NAD synthase 214 284 8.3E-6 T 13-10-2018 IPR022310 NAD/GMP synthase COP00_20160 a510edfabbb4799fd4750b7642769b5f 513 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 9 195 8.9E-88 T 13-10-2018 IPR004739 GMP synthase, glutamine amidotransferase GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 COP00_20160 a510edfabbb4799fd4750b7642769b5f 513 Gene3D G3DSA:3.40.50.880 3 196 6.7E-59 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like COP00_20160 a510edfabbb4799fd4750b7642769b5f 513 SUPERFAMILY SSF52402 188 406 2.43E-61 T 13-10-2018 COP00_20160 a510edfabbb4799fd4750b7642769b5f 513 SUPERFAMILY SSF52317 7 201 4.94E-60 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like COP00_20160 a510edfabbb4799fd4750b7642769b5f 513 PRINTS PR00097 Anthranilate synthase component II signature 80 91 4.3E-6 T 13-10-2018 COP00_20160 a510edfabbb4799fd4750b7642769b5f 513 PRINTS PR00097 Anthranilate synthase component II signature 168 181 4.3E-6 T 13-10-2018 COP00_20160 a510edfabbb4799fd4750b7642769b5f 513 PRINTS PR00097 Anthranilate synthase component II signature 53 62 4.3E-6 T 13-10-2018 COP00_20160 a510edfabbb4799fd4750b7642769b5f 513 Gene3D G3DSA:3.40.50.620 200 393 8.1E-77 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold COP00_20160 a510edfabbb4799fd4750b7642769b5f 513 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 50 64 2.7E-6 T 13-10-2018 COP00_20160 a510edfabbb4799fd4750b7642769b5f 513 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 9 23 2.7E-6 T 13-10-2018 COP00_20160 a510edfabbb4799fd4750b7642769b5f 513 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 80 96 2.7E-6 T 13-10-2018 COP00_20160 a510edfabbb4799fd4750b7642769b5f 513 PRINTS PR00096 Glutamine amidotransferase superfamily signature 53 62 4.9E-8 T 13-10-2018 COP00_20160 a510edfabbb4799fd4750b7642769b5f 513 PRINTS PR00096 Glutamine amidotransferase superfamily signature 80 91 4.9E-8 T 13-10-2018 COP00_20160 a510edfabbb4799fd4750b7642769b5f 513 PRINTS PR00096 Glutamine amidotransferase superfamily signature 168 181 4.9E-8 T 13-10-2018 COP00_20160 a510edfabbb4799fd4750b7642769b5f 513 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 203 513 2.8E-161 T 13-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 COP00_20160 a510edfabbb4799fd4750b7642769b5f 513 SUPERFAMILY SSF54810 393 513 2.88E-52 T 13-10-2018 COP00_20160 a510edfabbb4799fd4750b7642769b5f 513 Pfam PF00117 Glutamine amidotransferase class-I 11 191 1.5E-44 T 13-10-2018 IPR017926 Glutamine amidotransferase COP00_20160 a510edfabbb4799fd4750b7642769b5f 513 Gene3D G3DSA:3.30.300.10 394 513 2.4E-53 T 13-10-2018 COP00_20160 a510edfabbb4799fd4750b7642769b5f 513 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 6 513 56.011 T 13-10-2018 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221 COP00_20160 a510edfabbb4799fd4750b7642769b5f 513 Pfam PF00958 GMP synthase C terminal domain 421 512 1.3E-45 T 13-10-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 COP00_11030 76751b0ad0f72c7a4d45ba054f646655 391 ProSitePatterns PS00099 Thiolases active site. 372 385 - T 13-10-2018 IPR020610 Thiolase, active site GO:0016747 COP00_11030 76751b0ad0f72c7a4d45ba054f646655 391 SUPERFAMILY SSF53901 1 265 1.44E-74 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 COP00_11030 76751b0ad0f72c7a4d45ba054f646655 391 Gene3D G3DSA:3.40.47.10 131 387 1.8E-147 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 COP00_11030 76751b0ad0f72c7a4d45ba054f646655 391 Gene3D G3DSA:3.40.47.10 5 274 1.8E-147 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 COP00_11030 76751b0ad0f72c7a4d45ba054f646655 391 Pfam PF02803 Thiolase, C-terminal domain 269 389 3.6E-49 T 13-10-2018 IPR020617 Thiolase, C-terminal GO:0016747 COP00_11030 76751b0ad0f72c7a4d45ba054f646655 391 ProSitePatterns PS00737 Thiolases signature 2. 337 353 - T 13-10-2018 IPR020613 Thiolase, conserved site GO:0016747 COP00_11030 76751b0ad0f72c7a4d45ba054f646655 391 PIRSF PIRSF000429 1 391 2.6E-129 T 13-10-2018 IPR002155 Thiolase GO:0016747 COP00_11030 76751b0ad0f72c7a4d45ba054f646655 391 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 389 1.8E-138 T 13-10-2018 IPR002155 Thiolase GO:0016747 COP00_11030 76751b0ad0f72c7a4d45ba054f646655 391 SUPERFAMILY SSF53901 269 390 1.91E-44 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 COP00_11030 76751b0ad0f72c7a4d45ba054f646655 391 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 86 104 - T 13-10-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0016747 COP00_11030 76751b0ad0f72c7a4d45ba054f646655 391 Pfam PF00108 Thiolase, N-terminal domain 5 260 3.2E-77 T 13-10-2018 IPR020616 Thiolase, N-terminal GO:0016747 COP00_13935 184700a0114b0f1ed4af41f133d08153 319 Pfam PF03547 Membrane transport protein 166 314 5.8E-20 T 13-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 COP00_13935 184700a0114b0f1ed4af41f133d08153 319 Pfam PF03547 Membrane transport protein 7 164 1.7E-25 T 13-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 COP00_05440 87199ec0468140a2ad189e0442284e7d 66 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 1 61 2.0E-31 T 13-10-2018 COP00_05440 87199ec0468140a2ad189e0442284e7d 66 Pfam PF14178 YppF-like protein 1 58 2.0E-26 T 13-10-2018 IPR025553 YppF-like protein COP00_09515 24e27b1e4ecd22283081206b2bc7e978 256 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 5.5E-8 T 13-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 COP00_09515 24e27b1e4ecd22283081206b2bc7e978 256 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 5.5E-8 T 13-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 COP00_09515 24e27b1e4ecd22283081206b2bc7e978 256 SMART SM00420 6 58 3.0E-20 T 13-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 COP00_09515 24e27b1e4ecd22283081206b2bc7e978 256 Gene3D G3DSA:1.10.10.10 1 59 4.4E-9 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_09515 24e27b1e4ecd22283081206b2bc7e978 256 SUPERFAMILY SSF46785 4 60 2.45E-14 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_09515 24e27b1e4ecd22283081206b2bc7e978 256 SMART SM01134 73 233 2.5E-70 T 13-10-2018 COP00_09515 24e27b1e4ecd22283081206b2bc7e978 256 SUPERFAMILY SSF100950 77 232 1.08E-33 T 13-10-2018 IPR037171 NagB/RpiA transferase-like COP00_09515 24e27b1e4ecd22283081206b2bc7e978 256 Pfam PF00455 DeoR C terminal sensor domain 75 232 7.5E-52 T 13-10-2018 IPR014036 DeoR C-terminal sensor domain COP00_09515 24e27b1e4ecd22283081206b2bc7e978 256 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 13-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 COP00_09515 24e27b1e4ecd22283081206b2bc7e978 256 Pfam PF08220 DeoR-like helix-turn-helix domain 6 60 3.3E-20 T 13-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 COP00_16545 2a8f2d70f6ef86aa1faf0a882b1dae8c 358 Gene3D G3DSA:1.20.1260.110 145 290 1.1E-44 T 13-10-2018 IPR038331 DisA, linker domain superfamily COP00_16545 2a8f2d70f6ef86aa1faf0a882b1dae8c 358 Gene3D G3DSA:3.40.1700.10 8 144 1.5E-57 T 13-10-2018 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily COP00_16545 2a8f2d70f6ef86aa1faf0a882b1dae8c 358 Pfam PF10635 DisA bacterial checkpoint controller linker region 144 282 1.1E-48 T 13-10-2018 IPR018906 DNA integrity scanning, DisA, linker region COP00_16545 2a8f2d70f6ef86aa1faf0a882b1dae8c 358 SUPERFAMILY SSF143597 20 144 4.05E-31 T 13-10-2018 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily COP00_16545 2a8f2d70f6ef86aa1faf0a882b1dae8c 358 Gene3D G3DSA:1.10.150.20 291 354 1.4E-24 T 13-10-2018 COP00_16545 2a8f2d70f6ef86aa1faf0a882b1dae8c 358 SUPERFAMILY SSF47781 241 355 1.42E-13 T 13-10-2018 IPR010994 RuvA domain 2-like COP00_16545 2a8f2d70f6ef86aa1faf0a882b1dae8c 358 Hamap MF_01438 DNA integrity scanning protein DisA [disA]. 7 355 44.724 T 13-10-2018 IPR023763 DNA integrity scanning protein, DisA COP00_16545 2a8f2d70f6ef86aa1faf0a882b1dae8c 358 Pfam PF02457 DisA bacterial checkpoint controller nucleotide-binding 27 139 1.7E-28 T 13-10-2018 IPR003390 DNA integrity scanning protein, DisA, N-terminal COP00_08565 1ca7487f2529ddc600e33dc11fcf5255 195 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 11 193 29.081 T 13-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 COP00_08565 1ca7487f2529ddc600e33dc11fcf5255 195 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 7 189 2.6E-71 T 13-10-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 COP00_08565 1ca7487f2529ddc600e33dc11fcf5255 195 SUPERFAMILY SSF52540 16 193 9.13E-38 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_08565 1ca7487f2529ddc600e33dc11fcf5255 195 Pfam PF01926 50S ribosome-binding GTPase 25 143 6.4E-21 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 COP00_08565 1ca7487f2529ddc600e33dc11fcf5255 195 Gene3D G3DSA:3.40.50.300 1 194 2.1E-55 T 13-10-2018 COP00_09485 62e52be8e2bfae73ed0628729eb86a1e 435 Pfam PF00860 Permease family 13 394 2.1E-68 T 13-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 COP00_09485 62e52be8e2bfae73ed0628729eb86a1e 435 PIRSF PIRSF005353 1 434 4.3E-166 T 13-10-2018 IPR026033 Purine permease PbuG-like COP00_23080 f776b0a78f0ff4fa97b77db8ebd5f1b7 142 Pfam PF13673 Acetyltransferase (GNAT) domain 21 138 4.0E-23 T 13-10-2018 IPR000182 GNAT domain COP00_23080 f776b0a78f0ff4fa97b77db8ebd5f1b7 142 Gene3D G3DSA:3.40.630.30 2 139 8.5E-44 T 13-10-2018 COP00_23080 f776b0a78f0ff4fa97b77db8ebd5f1b7 142 SUPERFAMILY SSF55729 6 139 3.49E-34 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase COP00_11385 30eb5ecb730cf5870697321e88504ae8 703 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 149 698 2.2E-156 T 13-10-2018 COP00_11385 30eb5ecb730cf5870697321e88504ae8 703 PRINTS PR00941 Cadmium-transporting ATPase signature 19 40 5.1E-13 T 13-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 COP00_11385 30eb5ecb730cf5870697321e88504ae8 703 PRINTS PR00941 Cadmium-transporting ATPase signature 283 297 5.1E-13 T 13-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 COP00_11385 30eb5ecb730cf5870697321e88504ae8 703 PRINTS PR00941 Cadmium-transporting ATPase signature 264 280 5.1E-13 T 13-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 COP00_11385 30eb5ecb730cf5870697321e88504ae8 703 PRINTS PR00941 Cadmium-transporting ATPase signature 8 17 5.1E-13 T 13-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 COP00_11385 30eb5ecb730cf5870697321e88504ae8 703 PRINTS PR00941 Cadmium-transporting ATPase signature 183 203 5.1E-13 T 13-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 COP00_11385 30eb5ecb730cf5870697321e88504ae8 703 Gene3D G3DSA:2.70.150.20 186 302 1.1E-30 T 13-10-2018 COP00_11385 30eb5ecb730cf5870697321e88504ae8 703 SUPERFAMILY SSF56784 400 695 2.2E-54 T 13-10-2018 IPR036412 HAD-like superfamily COP00_11385 30eb5ecb730cf5870697321e88504ae8 703 Gene3D G3DSA:3.40.1110.10 411 522 2.3E-76 T 13-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 COP00_11385 30eb5ecb730cf5870697321e88504ae8 703 Pfam PF00702 haloacid dehalogenase-like hydrolase 397 608 1.0E-31 T 13-10-2018 COP00_11385 30eb5ecb730cf5870697321e88504ae8 703 Gene3D G3DSA:3.30.70.100 5 91 1.8E-11 T 13-10-2018 COP00_11385 30eb5ecb730cf5870697321e88504ae8 703 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 150 697 4.0E-169 T 13-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 COP00_11385 30eb5ecb730cf5870697321e88504ae8 703 Pfam PF00122 E1-E2 ATPase 200 379 5.2E-47 T 13-10-2018 COP00_11385 30eb5ecb730cf5870697321e88504ae8 703 ProSitePatterns PS01047 Heavy-metal-associated domain. 10 39 - T 13-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 COP00_11385 30eb5ecb730cf5870697321e88504ae8 703 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 172 674 1.3E-73 T 13-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 COP00_11385 30eb5ecb730cf5870697321e88504ae8 703 SUPERFAMILY SSF81653 201 298 1.12E-21 T 13-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 COP00_11385 30eb5ecb730cf5870697321e88504ae8 703 SUPERFAMILY SSF55008 5 74 1.7E-11 T 13-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 COP00_11385 30eb5ecb730cf5870697321e88504ae8 703 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 400 414 7.4E-22 T 13-10-2018 COP00_11385 30eb5ecb730cf5870697321e88504ae8 703 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 618 630 7.4E-22 T 13-10-2018 COP00_11385 30eb5ecb730cf5870697321e88504ae8 703 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 248 262 7.4E-22 T 13-10-2018 COP00_11385 30eb5ecb730cf5870697321e88504ae8 703 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 594 613 7.4E-22 T 13-10-2018 COP00_11385 30eb5ecb730cf5870697321e88504ae8 703 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 538 548 7.4E-22 T 13-10-2018 COP00_11385 30eb5ecb730cf5870697321e88504ae8 703 Gene3D G3DSA:3.40.50.1000 381 647 2.3E-76 T 13-10-2018 IPR023214 HAD superfamily COP00_11385 30eb5ecb730cf5870697321e88504ae8 703 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 402 408 - T 13-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 COP00_11385 30eb5ecb730cf5870697321e88504ae8 703 SUPERFAMILY SSF81665 150 693 1.83E-13 T 13-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 COP00_11385 30eb5ecb730cf5870697321e88504ae8 703 Pfam PF00403 Heavy-metal-associated domain 9 52 2.4E-11 T 13-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 COP00_20695 6281493120d73a8209c0262b00024b76 250 Gene3D G3DSA:3.90.230.10 1 250 1.8E-83 T 13-10-2018 COP00_20695 6281493120d73a8209c0262b00024b76 250 SUPERFAMILY SSF55920 4 248 8.11E-68 T 13-10-2018 IPR036005 Creatinase/aminopeptidase-like COP00_20695 6281493120d73a8209c0262b00024b76 250 PRINTS PR00599 Methionine aminopeptidase-1 signature 159 171 2.1E-18 T 13-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 COP00_20695 6281493120d73a8209c0262b00024b76 250 PRINTS PR00599 Methionine aminopeptidase-1 signature 89 105 2.1E-18 T 13-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 COP00_20695 6281493120d73a8209c0262b00024b76 250 PRINTS PR00599 Methionine aminopeptidase-1 signature 191 203 2.1E-18 T 13-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 COP00_20695 6281493120d73a8209c0262b00024b76 250 PRINTS PR00599 Methionine aminopeptidase-1 signature 66 79 2.1E-18 T 13-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 COP00_20695 6281493120d73a8209c0262b00024b76 250 Hamap MF_01974 Methionine aminopeptidase [map]. 1 249 35.688 T 13-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 COP00_20695 6281493120d73a8209c0262b00024b76 250 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 2 248 1.5E-98 T 13-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 COP00_20695 6281493120d73a8209c0262b00024b76 250 Pfam PF00557 Metallopeptidase family M24 11 240 2.4E-42 T 13-10-2018 IPR000994 Peptidase M24 COP00_19245 9e9b81bb20890da16f0a3cdf48dff15a 396 Pfam PF07690 Major Facilitator Superfamily 30 333 8.9E-32 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 COP00_19245 9e9b81bb20890da16f0a3cdf48dff15a 396 SUPERFAMILY SSF103473 15 392 2.35E-51 T 13-10-2018 IPR036259 MFS transporter superfamily COP00_19245 9e9b81bb20890da16f0a3cdf48dff15a 396 Gene3D G3DSA:1.20.1250.20 13 394 2.2E-41 T 13-10-2018 COP00_22970 1d61816c101c117d06cce4cd52847428 370 TIGRFAM TIGR02352 thiamin_ThiO: glycine oxidase ThiO 8 349 4.2E-109 T 13-10-2018 IPR012727 Glycine oxidase ThiO GO:0016491|GO:0050660 KEGG: 00730+1.4.3.19|MetaCyc: PWY-7396|MetaCyc: PWY-7806 COP00_22970 1d61816c101c117d06cce4cd52847428 370 Gene3D G3DSA:3.50.50.60 8 347 1.4E-122 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily COP00_22970 1d61816c101c117d06cce4cd52847428 370 Gene3D G3DSA:3.30.9.10 92 306 1.4E-122 T 13-10-2018 COP00_22970 1d61816c101c117d06cce4cd52847428 370 Pfam PF01266 FAD dependent oxidoreductase 7 346 4.3E-69 T 13-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 COP00_22970 1d61816c101c117d06cce4cd52847428 370 SUPERFAMILY SSF51905 5 363 1.08E-43 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily COP00_22970 1d61816c101c117d06cce4cd52847428 370 SUPERFAMILY SSF54373 221 306 1.57E-20 T 13-10-2018 COP00_01800 bed5fe214aa7df54576da3a51a6a60a9 185 Pfam PF13302 Acetyltransferase (GNAT) domain 27 148 1.1E-11 T 13-10-2018 IPR000182 GNAT domain COP00_01800 bed5fe214aa7df54576da3a51a6a60a9 185 Gene3D G3DSA:3.40.630.30 10 179 6.6E-29 T 13-10-2018 COP00_01800 bed5fe214aa7df54576da3a51a6a60a9 185 SUPERFAMILY SSF55729 8 173 4.69E-27 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase COP00_19525 1e7fd67ae406a42ba611e5f017999e84 543 SUPERFAMILY SSF48592 5 518 1.37E-80 T 13-10-2018 IPR027413 GroEL-like equatorial domain superfamily COP00_19525 1e7fd67ae406a42ba611e5f017999e84 543 SUPERFAMILY SSF52029 183 374 5.68E-85 T 13-10-2018 IPR027409 GroEL-like apical domain superfamily COP00_19525 1e7fd67ae406a42ba611e5f017999e84 543 Gene3D G3DSA:1.10.560.10 7 518 3.7E-237 T 13-10-2018 IPR027413 GroEL-like equatorial domain superfamily COP00_19525 1e7fd67ae406a42ba611e5f017999e84 543 PRINTS PR00298 60kDa chaperonin signature 82 109 2.0E-73 T 13-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 COP00_19525 1e7fd67ae406a42ba611e5f017999e84 543 PRINTS PR00298 60kDa chaperonin signature 26 52 2.0E-73 T 13-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 COP00_19525 1e7fd67ae406a42ba611e5f017999e84 543 PRINTS PR00298 60kDa chaperonin signature 266 289 2.0E-73 T 13-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 COP00_19525 1e7fd67ae406a42ba611e5f017999e84 543 PRINTS PR00298 60kDa chaperonin signature 396 417 2.0E-73 T 13-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 COP00_19525 1e7fd67ae406a42ba611e5f017999e84 543 PRINTS PR00298 60kDa chaperonin signature 348 373 2.0E-73 T 13-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 COP00_19525 1e7fd67ae406a42ba611e5f017999e84 543 TIGRFAM TIGR02348 GroEL: chaperonin GroL 2 524 5.4E-259 T 13-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 COP00_19525 1e7fd67ae406a42ba611e5f017999e84 543 Pfam PF00118 TCP-1/cpn60 chaperonin family 22 522 2.7E-104 T 13-10-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 COP00_19525 1e7fd67ae406a42ba611e5f017999e84 543 Hamap MF_00600 60 kDa chaperonin [groL]. 1 542 42.583 T 13-10-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 COP00_19525 1e7fd67ae406a42ba611e5f017999e84 543 ProSitePatterns PS00296 Chaperonins cpn60 signature. 403 414 - T 13-10-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 COP00_19525 1e7fd67ae406a42ba611e5f017999e84 543 Gene3D G3DSA:3.50.7.10 190 370 3.7E-237 T 13-10-2018 IPR027409 GroEL-like apical domain superfamily COP00_19525 1e7fd67ae406a42ba611e5f017999e84 543 Gene3D G3DSA:3.30.260.10 135 408 3.7E-237 T 13-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily COP00_19525 1e7fd67ae406a42ba611e5f017999e84 543 SUPERFAMILY SSF54849 136 204 3.66E-27 T 13-10-2018 IPR027410 TCP-1-like chaperonin intermediate domain superfamily COP00_20740 8965b0cf8be8eb2528ca8de7415e3df7 758 Gene3D G3DSA:3.90.550.10 360 679 2.4E-46 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases COP00_20740 8965b0cf8be8eb2528ca8de7415e3df7 758 Gene3D G3DSA:3.40.50.2000 198 229 9.0E-18 T 13-10-2018 COP00_20740 8965b0cf8be8eb2528ca8de7415e3df7 758 SUPERFAMILY SSF53756 150 403 2.04E-33 T 13-10-2018 COP00_20740 8965b0cf8be8eb2528ca8de7415e3df7 758 Pfam PF00534 Glycosyl transferases group 1 237 358 1.4E-15 T 13-10-2018 IPR001296 Glycosyl transferase, family 1 COP00_20740 8965b0cf8be8eb2528ca8de7415e3df7 758 Gene3D G3DSA:3.40.50.2000 230 357 9.0E-18 T 13-10-2018 COP00_20740 8965b0cf8be8eb2528ca8de7415e3df7 758 Pfam PF00535 Glycosyl transferase family 2 429 555 1.5E-22 T 13-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 COP00_20740 8965b0cf8be8eb2528ca8de7415e3df7 758 SUPERFAMILY SSF53448 425 655 2.72E-46 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases COP00_04985 8fb5aca148a32eeb6003b1fbde884e76 206 Gene3D G3DSA:3.40.109.10 1 206 8.6E-50 T 13-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 COP00_04985 8fb5aca148a32eeb6003b1fbde884e76 206 Pfam PF00881 Nitroreductase family 13 186 1.3E-29 T 13-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 COP00_04985 8fb5aca148a32eeb6003b1fbde884e76 206 SUPERFAMILY SSF55469 6 205 6.54E-51 T 13-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 COP00_01345 6fe781dc927f852fe4b733daf022bc01 150 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 100 147 7.0E-12 T 13-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain COP00_01345 6fe781dc927f852fe4b733daf022bc01 150 Pfam PF00460 Flagella basal body rod protein 7 35 3.4E-10 T 13-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 COP00_01345 6fe781dc927f852fe4b733daf022bc01 150 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 13 33 - T 13-10-2018 IPR019776 Flagellar basal body rod protein, conserved site COP00_01345 6fe781dc927f852fe4b733daf022bc01 150 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 4 150 3.5E-53 T 13-10-2018 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 COP00_04930 c6b984fc00d033f2e9a3bb2843bdf664 428 SUPERFAMILY SSF54106 239 284 3.14E-12 T 13-10-2018 COP00_04930 c6b984fc00d033f2e9a3bb2843bdf664 428 Pfam PF01476 LysM domain 96 137 3.8E-17 T 13-10-2018 IPR018392 LysM domain COP00_04930 c6b984fc00d033f2e9a3bb2843bdf664 428 Pfam PF01476 LysM domain 170 211 3.3E-14 T 13-10-2018 IPR018392 LysM domain COP00_04930 c6b984fc00d033f2e9a3bb2843bdf664 428 Pfam PF01476 LysM domain 30 71 2.4E-15 T 13-10-2018 IPR018392 LysM domain COP00_04930 c6b984fc00d033f2e9a3bb2843bdf664 428 Pfam PF01476 LysM domain 242 283 5.4E-17 T 13-10-2018 IPR018392 LysM domain COP00_04930 c6b984fc00d033f2e9a3bb2843bdf664 428 SUPERFAMILY SSF54106 27 71 1.57E-10 T 13-10-2018 COP00_04930 c6b984fc00d033f2e9a3bb2843bdf664 428 SMART SM00257 169 212 1.3E-16 T 13-10-2018 IPR018392 LysM domain COP00_04930 c6b984fc00d033f2e9a3bb2843bdf664 428 SMART SM00257 95 138 1.7E-19 T 13-10-2018 IPR018392 LysM domain COP00_04930 c6b984fc00d033f2e9a3bb2843bdf664 428 SMART SM00257 28 71 8.4E-18 T 13-10-2018 IPR018392 LysM domain COP00_04930 c6b984fc00d033f2e9a3bb2843bdf664 428 SMART SM00257 241 284 3.0E-19 T 13-10-2018 IPR018392 LysM domain COP00_04930 c6b984fc00d033f2e9a3bb2843bdf664 428 Pfam PF00877 NlpC/P60 family 324 424 5.9E-29 T 13-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain COP00_04930 c6b984fc00d033f2e9a3bb2843bdf664 428 Gene3D G3DSA:3.10.350.10 227 302 1.8E-20 T 13-10-2018 IPR036779 LysM domain superfamily COP00_04930 c6b984fc00d033f2e9a3bb2843bdf664 428 Gene3D G3DSA:3.10.350.10 152 226 2.8E-18 T 13-10-2018 IPR036779 LysM domain superfamily COP00_04930 c6b984fc00d033f2e9a3bb2843bdf664 428 Gene3D G3DSA:3.10.350.10 25 78 1.0E-17 T 13-10-2018 IPR036779 LysM domain superfamily COP00_04930 c6b984fc00d033f2e9a3bb2843bdf664 428 Gene3D G3DSA:3.10.350.10 91 146 1.2E-21 T 13-10-2018 IPR036779 LysM domain superfamily COP00_04930 c6b984fc00d033f2e9a3bb2843bdf664 428 SUPERFAMILY SSF54106 168 211 7.19E-11 T 13-10-2018 COP00_04930 c6b984fc00d033f2e9a3bb2843bdf664 428 SUPERFAMILY SSF54106 94 137 6.54E-13 T 13-10-2018 COP00_04930 c6b984fc00d033f2e9a3bb2843bdf664 428 SUPERFAMILY SSF54001 308 426 5.4E-36 T 13-10-2018 IPR038765 Papain-like cysteine peptidase superfamily COP00_04930 c6b984fc00d033f2e9a3bb2843bdf664 428 Gene3D G3DSA:3.90.1720.10 304 427 4.1E-35 T 13-10-2018 COP00_16600 46b93afa93e6ef55d328b499ce5d300e 49 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 3 49 4.2E-15 T 13-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_16600 46b93afa93e6ef55d328b499ce5d300e 49 Pfam PF00471 Ribosomal protein L33 3 49 2.5E-18 T 13-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_16600 46b93afa93e6ef55d328b499ce5d300e 49 Gene3D G3DSA:2.20.28.120 1 49 1.4E-17 T 13-10-2018 IPR038584 Ribosomal protein L33 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_16600 46b93afa93e6ef55d328b499ce5d300e 49 SUPERFAMILY SSF57829 1 49 1.1E-15 T 13-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 COP00_16600 46b93afa93e6ef55d328b499ce5d300e 49 ProSitePatterns PS00582 Ribosomal protein L33 signature. 17 36 - T 13-10-2018 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 COP00_16600 46b93afa93e6ef55d328b499ce5d300e 49 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 1 49 17.362 T 13-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_13000 710244df882ac29d11725e37ecdd9b6e 352 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 239 258 - T 13-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 COP00_13000 710244df882ac29d11725e37ecdd9b6e 352 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 6 345 9.7E-84 T 13-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 COP00_13000 710244df882ac29d11725e37ecdd9b6e 352 Gene3D G3DSA:3.40.718.10 1 352 2.4E-128 T 13-10-2018 COP00_13000 710244df882ac29d11725e37ecdd9b6e 352 SUPERFAMILY SSF53659 2 349 9.02E-116 T 13-10-2018 COP00_13000 710244df882ac29d11725e37ecdd9b6e 352 TIGRFAM TIGR02089 TTC: tartrate dehydrogenase 1 349 5.9E-186 T 13-10-2018 IPR011829 Tartrate dehydrogenase GO:0016616|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.93|KEGG: 00650+1.1.1.83 COP00_13000 710244df882ac29d11725e37ecdd9b6e 352 SMART SM01329 5 345 1.2E-168 T 13-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 COP00_11205 6d6e646c6e8a925a35592b7c5fcf4c84 71 Gene3D G3DSA:3.40.50.2000 1 69 2.4E-7 T 13-10-2018 COP00_22860 4c4b47cda9343875e17f83f4c2483f93 355 SMART SM00382 33 241 2.4E-19 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_22860 4c4b47cda9343875e17f83f4c2483f93 355 Gene3D G3DSA:3.40.50.300 1 329 9.3E-99 T 13-10-2018 COP00_22860 4c4b47cda9343875e17f83f4c2483f93 355 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 235 298 1.7E-13 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 COP00_22860 4c4b47cda9343875e17f83f4c2483f93 355 SUPERFAMILY SSF52540 4 254 8.72E-74 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_22860 4c4b47cda9343875e17f83f4c2483f93 355 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 233 319 1.1E-19 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 COP00_22860 4c4b47cda9343875e17f83f4c2483f93 355 ProSitePatterns PS00211 ABC transporters family signature. 156 170 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 COP00_22860 4c4b47cda9343875e17f83f4c2483f93 355 Pfam PF00005 ABC transporter 25 183 7.7E-30 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 COP00_17035 02d6797e5fc056ce57dadc498f97cb73 600 Gene3D G3DSA:3.60.20.10 2 239 1.3E-69 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal COP00_17035 02d6797e5fc056ce57dadc498f97cb73 600 Gene3D G3DSA:3.40.50.10490 444 600 1.9E-62 T 13-10-2018 COP00_17035 02d6797e5fc056ce57dadc498f97cb73 600 Pfam PF01380 SIS domain 458 582 6.7E-22 T 13-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 COP00_17035 02d6797e5fc056ce57dadc498f97cb73 600 Pfam PF01380 SIS domain 288 413 8.5E-36 T 13-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 COP00_17035 02d6797e5fc056ce57dadc498f97cb73 600 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 600 39.154 T 13-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 COP00_17035 02d6797e5fc056ce57dadc498f97cb73 600 SUPERFAMILY SSF56235 2 234 1.12E-62 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal COP00_17035 02d6797e5fc056ce57dadc498f97cb73 600 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 600 1.9E-233 T 13-10-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 COP00_17035 02d6797e5fc056ce57dadc498f97cb73 600 SUPERFAMILY SSF53697 244 600 5.88E-98 T 13-10-2018 COP00_17035 02d6797e5fc056ce57dadc498f97cb73 600 Gene3D G3DSA:3.40.50.10490 243 443 3.2E-64 T 13-10-2018 COP00_17035 02d6797e5fc056ce57dadc498f97cb73 600 Pfam PF13522 Glutamine amidotransferase domain 59 191 3.2E-20 T 13-10-2018 COP00_09520 3bc8a9ade78b531196b0ba081ff117cf 428 SUPERFAMILY SSF142764 3 424 3.01E-80 T 13-10-2018 COP00_09520 3bc8a9ade78b531196b0ba081ff117cf 428 Pfam PF07005 Putative sugar-binding N-terminal domain 3 228 3.5E-49 T 13-10-2018 IPR010737 Four-carbon acid sugar kinase, N-terminal domain COP00_09520 3bc8a9ade78b531196b0ba081ff117cf 428 Pfam PF17042 Putative nucleotide-binding of sugar-metabolising enzyme 245 416 4.5E-27 T 13-10-2018 IPR031475 Four-carbon acid sugar kinase, C-terminal domain COP00_09520 3bc8a9ade78b531196b0ba081ff117cf 428 Gene3D G3DSA:3.40.50.10840 2 223 7.9E-59 T 13-10-2018 IPR037051 Four-carbon acid sugar kinase, N-terminal domain superfamily COP00_09520 3bc8a9ade78b531196b0ba081ff117cf 428 Gene3D G3DSA:3.40.980.20 231 426 2.3E-10 T 13-10-2018 COP00_10125 41b4f8e9358292f32f03fa638e1c192f 184 PIRSF PIRSF006707 1 184 4.0E-52 T 13-10-2018 IPR026282 DNA-binding protein, MJ1563 type COP00_10125 41b4f8e9358292f32f03fa638e1c192f 184 SUPERFAMILY SSF46785 13 162 8.4E-21 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_10125 41b4f8e9358292f32f03fa638e1c192f 184 Gene3D G3DSA:1.10.10.10 12 94 2.1E-20 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_04085 7e178c7854d5ba628d17f26c35b9fddc 215 Pfam PF13412 Winged helix-turn-helix DNA-binding 10 48 2.8E-8 T 13-10-2018 COP00_04085 7e178c7854d5ba628d17f26c35b9fddc 215 SMART SM00420 8 53 0.0094 T 13-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 COP00_04085 7e178c7854d5ba628d17f26c35b9fddc 215 SUPERFAMILY SSF46785 7 187 1.78E-32 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_04085 7e178c7854d5ba628d17f26c35b9fddc 215 Gene3D G3DSA:1.10.10.10 4 91 5.9E-13 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_00025 4786d98c17a569ab3bb163a7182ad46c 111 Pfam PF05521 Phage head-tail joining protein 7 103 3.2E-26 T 13-10-2018 IPR008767 Bacteriophage SPP1, head-tail adaptor COP00_00025 4786d98c17a569ab3bb163a7182ad46c 111 TIGRFAM TIGR01563 gp16_SPP1: putative phage head-tail adaptor 5 107 1.6E-21 T 13-10-2018 IPR008767 Bacteriophage SPP1, head-tail adaptor COP00_00025 4786d98c17a569ab3bb163a7182ad46c 111 Gene3D G3DSA:2.40.10.270 1 110 2.8E-24 T 13-10-2018 IPR038666 Bacteriophage SPP1, head-tail adaptor superfamily COP00_24540 4786d98c17a569ab3bb163a7182ad46c 111 Pfam PF05521 Phage head-tail joining protein 7 103 3.2E-26 T 13-10-2018 IPR008767 Bacteriophage SPP1, head-tail adaptor COP00_24540 4786d98c17a569ab3bb163a7182ad46c 111 TIGRFAM TIGR01563 gp16_SPP1: putative phage head-tail adaptor 5 107 1.6E-21 T 13-10-2018 IPR008767 Bacteriophage SPP1, head-tail adaptor COP00_24540 4786d98c17a569ab3bb163a7182ad46c 111 Gene3D G3DSA:2.40.10.270 1 110 2.8E-24 T 13-10-2018 IPR038666 Bacteriophage SPP1, head-tail adaptor superfamily COP00_12370 4786d98c17a569ab3bb163a7182ad46c 111 Pfam PF05521 Phage head-tail joining protein 7 103 3.2E-26 T 13-10-2018 IPR008767 Bacteriophage SPP1, head-tail adaptor COP00_12370 4786d98c17a569ab3bb163a7182ad46c 111 TIGRFAM TIGR01563 gp16_SPP1: putative phage head-tail adaptor 5 107 1.6E-21 T 13-10-2018 IPR008767 Bacteriophage SPP1, head-tail adaptor COP00_12370 4786d98c17a569ab3bb163a7182ad46c 111 Gene3D G3DSA:2.40.10.270 1 110 2.8E-24 T 13-10-2018 IPR038666 Bacteriophage SPP1, head-tail adaptor superfamily COP00_19215 f05afbd4445f959f93c6bb6bd50eeef1 197 PIRSF PIRSF021308 1 197 1.1E-100 T 13-10-2018 IPR016786 Uncharacterised protein YdeI, bacterial COP00_19215 f05afbd4445f959f93c6bb6bd50eeef1 197 Pfam PF08818 Domain of unknown function (DU1801) 20 117 1.3E-15 T 13-10-2018 IPR014922 Domain of unknown function DUF1801 COP00_19215 f05afbd4445f959f93c6bb6bd50eeef1 197 SUPERFAMILY SSF159888 9 126 1.27E-21 T 13-10-2018 COP00_19215 f05afbd4445f959f93c6bb6bd50eeef1 197 Pfam PF13376 Bacteriocin-protection, YdeI or OmpD-Associated 133 192 4.2E-20 T 13-10-2018 COP00_19075 18d9bc961fe8a5609710a7dce8a50880 335 ProDom PD685490 RSBU REGULATOR SIGMA REGULATION FACTOR B PHOSPHATASE SIGMAB INDIRECT SIGMA-B 5 91 2.0E-43 T 13-10-2018 IPR014787 Phosphoserine phosphatase RsbU, N-terminal KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3 COP00_19075 18d9bc961fe8a5609710a7dce8a50880 335 Pfam PF08673 Phosphoserine phosphatase RsbU, N-terminal domain 9 83 1.8E-29 T 13-10-2018 IPR014787 Phosphoserine phosphatase RsbU, N-terminal KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3 COP00_19075 18d9bc961fe8a5609710a7dce8a50880 335 Gene3D G3DSA:3.60.40.10 86 335 1.2E-55 T 13-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 COP00_19075 18d9bc961fe8a5609710a7dce8a50880 335 SUPERFAMILY SSF81606 128 332 2.22E-8 T 13-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 COP00_19075 18d9bc961fe8a5609710a7dce8a50880 335 SMART SM00331 119 333 1.1E-71 T 13-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 COP00_19075 18d9bc961fe8a5609710a7dce8a50880 335 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 146 333 5.2E-51 T 13-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 COP00_19075 18d9bc961fe8a5609710a7dce8a50880 335 Gene3D G3DSA:1.10.1240.30 1 84 1.1E-33 T 13-10-2018 IPR017944 KaiA/RbsU helical domain superfamily GO:0006468 COP00_19075 18d9bc961fe8a5609710a7dce8a50880 335 SUPERFAMILY SSF101215 2 84 2.29E-29 T 13-10-2018 IPR017944 KaiA/RbsU helical domain superfamily GO:0006468 COP00_04880 0fae08a3c4843e30e1c62280ef1529d3 169 PRINTS PR00598 Bacterial regulatory protein MarR family signature 114 130 8.3E-9 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 COP00_04880 0fae08a3c4843e30e1c62280ef1529d3 169 PRINTS PR00598 Bacterial regulatory protein MarR family signature 95 110 8.3E-9 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 COP00_04880 0fae08a3c4843e30e1c62280ef1529d3 169 PRINTS PR00598 Bacterial regulatory protein MarR family signature 144 164 8.3E-9 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 COP00_04880 0fae08a3c4843e30e1c62280ef1529d3 169 PRINTS PR00598 Bacterial regulatory protein MarR family signature 78 94 8.3E-9 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 COP00_04880 0fae08a3c4843e30e1c62280ef1529d3 169 ProSitePatterns PS01117 MarR-type HTH domain signature. 93 127 - T 13-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site COP00_04880 0fae08a3c4843e30e1c62280ef1529d3 169 SMART SM00347 54 154 1.1E-25 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 COP00_04880 0fae08a3c4843e30e1c62280ef1529d3 169 Gene3D G3DSA:1.10.10.10 13 169 2.3E-30 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_04880 0fae08a3c4843e30e1c62280ef1529d3 169 Pfam PF01047 MarR family 61 119 6.7E-17 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 COP00_04880 0fae08a3c4843e30e1c62280ef1529d3 169 SUPERFAMILY SSF46785 27 167 1.66E-28 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_09555 8298f898af9cd3ae1afcb84b66f71c44 119 Pfam PF09350 Domain of unknown function (DUF1992) 12 71 1.4E-8 T 13-10-2018 IPR018961 DnaJ homologue, subfamily C, member 28, conserved domain COP00_20370 f0c753c92eb007a876a965f042815f5e 328 ProSitePatterns PS00095 C-5 cytosine-specific DNA methylases C-terminal signature. 287 305 - T 13-10-2018 IPR031303 DNA methylase, C-5 cytosine-specific, conserved site KEGG: 00270+2.1.1.37 COP00_20370 f0c753c92eb007a876a965f042815f5e 328 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 111 125 9.5E-17 T 13-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 COP00_20370 f0c753c92eb007a876a965f042815f5e 328 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 4 20 9.5E-17 T 13-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 COP00_20370 f0c753c92eb007a876a965f042815f5e 328 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 156 169 9.5E-17 T 13-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 COP00_20370 f0c753c92eb007a876a965f042815f5e 328 TIGRFAM TIGR00675 dcm: DNA (cytosine-5-)-methyltransferase 5 305 4.2E-103 T 13-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 COP00_20370 f0c753c92eb007a876a965f042815f5e 328 Gene3D G3DSA:3.40.50.150 4 298 8.0E-103 T 13-10-2018 COP00_20370 f0c753c92eb007a876a965f042815f5e 328 ProSitePatterns PS00094 C-5 cytosine-specific DNA methylases active site. 63 75 - T 13-10-2018 IPR018117 DNA methylase, C-5 cytosine-specific, active site KEGG: 00270+2.1.1.37|Reactome: R-HSA-212300|Reactome: R-HSA-4655427|Reactome: R-HSA-5334118 COP00_20370 f0c753c92eb007a876a965f042815f5e 328 SUPERFAMILY SSF53335 3 310 2.29E-87 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase COP00_20370 f0c753c92eb007a876a965f042815f5e 328 Gene3D G3DSA:3.90.120.10 182 271 8.0E-103 T 13-10-2018 COP00_20370 f0c753c92eb007a876a965f042815f5e 328 Pfam PF00145 C-5 cytosine-specific DNA methylase 3 306 2.4E-92 T 13-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 COP00_00820 0059bf7666635d381d2ef5a8888e23db 118 Pfam PF04977 Septum formation initiator 44 106 6.2E-8 T 13-10-2018 IPR007060 Septum formation initiator FtsL/DivIC COP00_00820 0059bf7666635d381d2ef5a8888e23db 118 TIGRFAM TIGR02209 ftsL_broad: cell division protein FtsL 35 117 3.5E-19 T 13-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 COP00_00820 0059bf7666635d381d2ef5a8888e23db 118 Hamap MF_00910 Cell division protein FtsL [ftsL]. 35 117 13.166 T 13-10-2018 IPR011922 Cell division protein FtsL GO:0016021|GO:0051301 COP00_04745 450a24f1bd4b8ceec81f4d5fc00ab882 3152 SUPERFAMILY SSF52777 34 197 1.28E-43 T 13-10-2018 COP00_04745 450a24f1bd4b8ceec81f4d5fc00ab882 3152 Pfam PF00550 Phosphopantetheine attachment site 981 1044 7.6E-13 T 13-10-2018 IPR009081 Phosphopantetheine binding ACP domain COP00_04745 450a24f1bd4b8ceec81f4d5fc00ab882 3152 Pfam PF00550 Phosphopantetheine attachment site 2026 2089 3.3E-13 T 13-10-2018 IPR009081 Phosphopantetheine binding ACP domain COP00_04745 450a24f1bd4b8ceec81f4d5fc00ab882 3152 Pfam PF00550 Phosphopantetheine attachment site 3065 3128 5.5E-17 T 13-10-2018 IPR009081 Phosphopantetheine binding ACP domain COP00_04745 450a24f1bd4b8ceec81f4d5fc00ab882 3152 SUPERFAMILY SSF47336 2016 2089 4.84E-19 T 13-10-2018 IPR036736 ACP-like superfamily COP00_04745 450a24f1bd4b8ceec81f4d5fc00ab882 3152 ProSitePatterns PS00012 Phosphopantetheine attachment site. 3087 3102 - T 13-10-2018 IPR006162 Phosphopantetheine attachment site COP00_04745 450a24f1bd4b8ceec81f4d5fc00ab882 3152 Pfam PF13193 AMP-binding enzyme C-terminal domain 880 953 8.1E-10 T 13-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain COP00_04745 450a24f1bd4b8ceec81f4d5fc00ab882 3152 Pfam PF13193 AMP-binding enzyme C-terminal domain 1925 1998 2.1E-12 T 13-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain COP00_04745 450a24f1bd4b8ceec81f4d5fc00ab882 3152 Pfam PF13193 AMP-binding enzyme C-terminal domain 2965 3038 2.8E-11 T 13-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain COP00_04745 450a24f1bd4b8ceec81f4d5fc00ab882 3152 SUPERFAMILY SSF56801 1472 2037 8.37E-167 T 13-10-2018 COP00_04745 450a24f1bd4b8ceec81f4d5fc00ab882 3152 Gene3D G3DSA:3.40.50.12780 1500 1911 7.0E-142 T 13-10-2018 COP00_04745 450a24f1bd4b8ceec81f4d5fc00ab882 3152 Gene3D G3DSA:3.40.50.12780 466 866 1.9E-140 T 13-10-2018 COP00_04745 450a24f1bd4b8ceec81f4d5fc00ab882 3152 Gene3D G3DSA:3.30.300.30 867 968 1.2E-32 T 13-10-2018 COP00_04745 450a24f1bd4b8ceec81f4d5fc00ab882 3152 Gene3D G3DSA:3.30.300.30 2952 3052 6.2E-32 T 13-10-2018 COP00_04745 450a24f1bd4b8ceec81f4d5fc00ab882 3152 Gene3D G3DSA:3.30.300.30 1912 2012 1.9E-34 T 13-10-2018 COP00_04745 450a24f1bd4b8ceec81f4d5fc00ab882 3152 SUPERFAMILY SSF47336 971 1045 7.72E-19 T 13-10-2018 IPR036736 ACP-like superfamily COP00_04745 450a24f1bd4b8ceec81f4d5fc00ab882 3152 Gene3D G3DSA:3.30.559.10 1066 1424 7.4E-149 T 13-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 COP00_04745 450a24f1bd4b8ceec81f4d5fc00ab882 3152 Gene3D G3DSA:3.30.559.30 1234 1480 7.4E-149 T 13-10-2018 COP00_04745 450a24f1bd4b8ceec81f4d5fc00ab882 3152 SUPERFAMILY SSF52777 2113 2275 1.67E-43 T 13-10-2018 COP00_04745 450a24f1bd4b8ceec81f4d5fc00ab882 3152 Pfam PF00501 AMP-binding enzyme 2560 2957 2.8E-103 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 COP00_04745 450a24f1bd4b8ceec81f4d5fc00ab882 3152 Pfam PF00501 AMP-binding enzyme 481 872 5.7E-103 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 COP00_04745 450a24f1bd4b8ceec81f4d5fc00ab882 3152 Pfam PF00501 AMP-binding enzyme 1515 1917 2.0E-106 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 COP00_04745 450a24f1bd4b8ceec81f4d5fc00ab882 3152 Gene3D G3DSA:3.30.559.10 34 390 2.8E-149 T 13-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 COP00_04745 450a24f1bd4b8ceec81f4d5fc00ab882 3152 SUPERFAMILY SSF56801 2517 3076 3.79E-157 T 13-10-2018 COP00_04745 450a24f1bd4b8ceec81f4d5fc00ab882 3152 ProSitePatterns PS00455 Putative AMP-binding domain signature. 620 631 - T 13-10-2018 IPR020845 AMP-binding, conserved site COP00_04745 450a24f1bd4b8ceec81f4d5fc00ab882 3152 SUPERFAMILY SSF52777 204 467 1.67E-60 T 13-10-2018 COP00_04745 450a24f1bd4b8ceec81f4d5fc00ab882 3152 ProSitePatterns PS00455 Putative AMP-binding domain signature. 1654 1665 - T 13-10-2018 IPR020845 AMP-binding, conserved site COP00_04745 450a24f1bd4b8ceec81f4d5fc00ab882 3152 ProSitePatterns PS00455 Putative AMP-binding domain signature. 2699 2710 - T 13-10-2018 IPR020845 AMP-binding, conserved site COP00_04745 450a24f1bd4b8ceec81f4d5fc00ab882 3152 SUPERFAMILY SSF56801 438 992 2.49E-156 T 13-10-2018 COP00_04745 450a24f1bd4b8ceec81f4d5fc00ab882 3152 SUPERFAMILY SSF47336 3055 3128 2.49E-21 T 13-10-2018 IPR036736 ACP-like superfamily COP00_04745 450a24f1bd4b8ceec81f4d5fc00ab882 3152 Gene3D G3DSA:3.30.559.30 201 446 2.8E-149 T 13-10-2018 COP00_04745 450a24f1bd4b8ceec81f4d5fc00ab882 3152 SMART SM00823 Phosphopantetheine attachment site 2024 2093 8.9E-6 T 13-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 COP00_04745 450a24f1bd4b8ceec81f4d5fc00ab882 3152 SMART SM00823 Phosphopantetheine attachment site 979 1048 3.5E-4 T 13-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 COP00_04745 450a24f1bd4b8ceec81f4d5fc00ab882 3152 SMART SM00823 Phosphopantetheine attachment site 3063 3132 8.1E-8 T 13-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 COP00_04745 450a24f1bd4b8ceec81f4d5fc00ab882 3152 Gene3D G3DSA:3.30.559.30 2279 2525 3.2E-152 T 13-10-2018 COP00_04745 450a24f1bd4b8ceec81f4d5fc00ab882 3152 Pfam PF00668 Condensation domain 2106 2539 1.5E-130 T 13-10-2018 IPR001242 Condensation domain COP00_04745 450a24f1bd4b8ceec81f4d5fc00ab882 3152 Pfam PF00668 Condensation domain 1061 1495 2.4E-127 T 13-10-2018 IPR001242 Condensation domain COP00_04745 450a24f1bd4b8ceec81f4d5fc00ab882 3152 Pfam PF00668 Condensation domain 29 461 5.3E-125 T 13-10-2018 IPR001242 Condensation domain COP00_04745 450a24f1bd4b8ceec81f4d5fc00ab882 3152 SUPERFAMILY SSF52777 1068 1230 1.22E-42 T 13-10-2018 COP00_04745 450a24f1bd4b8ceec81f4d5fc00ab882 3152 Gene3D G3DSA:1.10.1200.10 969 1053 4.4E-27 T 13-10-2018 IPR036736 ACP-like superfamily COP00_04745 450a24f1bd4b8ceec81f4d5fc00ab882 3152 Gene3D G3DSA:1.10.1200.10 2013 2098 2.1E-27 T 13-10-2018 IPR036736 ACP-like superfamily COP00_04745 450a24f1bd4b8ceec81f4d5fc00ab882 3152 Gene3D G3DSA:3.40.50.1820 3053 3150 2.6E-30 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold COP00_04745 450a24f1bd4b8ceec81f4d5fc00ab882 3152 SUPERFAMILY SSF52777 2283 2523 2.33E-63 T 13-10-2018 COP00_04745 450a24f1bd4b8ceec81f4d5fc00ab882 3152 Gene3D G3DSA:3.40.50.12780 2549 2949 2.3E-132 T 13-10-2018 COP00_04745 450a24f1bd4b8ceec81f4d5fc00ab882 3152 Gene3D G3DSA:3.30.559.10 2112 2469 3.2E-152 T 13-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 COP00_04745 450a24f1bd4b8ceec81f4d5fc00ab882 3152 ProSitePatterns PS00012 Phosphopantetheine attachment site. 2048 2063 - T 13-10-2018 IPR006162 Phosphopantetheine attachment site COP00_04745 450a24f1bd4b8ceec81f4d5fc00ab882 3152 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 502 896 1.8E-132 T 13-10-2018 IPR010071 Amino acid adenylation domain COP00_04745 450a24f1bd4b8ceec81f4d5fc00ab882 3152 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 1536 1941 2.0E-141 T 13-10-2018 IPR010071 Amino acid adenylation domain COP00_04745 450a24f1bd4b8ceec81f4d5fc00ab882 3152 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 2581 2981 2.8E-126 T 13-10-2018 IPR010071 Amino acid adenylation domain COP00_04745 450a24f1bd4b8ceec81f4d5fc00ab882 3152 SUPERFAMILY SSF52777 1236 1501 1.22E-63 T 13-10-2018 COP00_09415 d5b29e56c5e3a5f8b2d1781f0cf6780c 148 TIGRFAM TIGR03646 YtoQ_fam: YtoQ family protein 3 146 1.1E-71 T 13-10-2018 IPR019884 YtoQ family protein COP00_09415 d5b29e56c5e3a5f8b2d1781f0cf6780c 148 SUPERFAMILY SSF52309 2 117 2.69E-6 T 13-10-2018 COP00_09415 d5b29e56c5e3a5f8b2d1781f0cf6780c 148 Gene3D G3DSA:3.40.50.450 2 147 2.6E-7 T 13-10-2018 COP00_09415 d5b29e56c5e3a5f8b2d1781f0cf6780c 148 Pfam PF11071 Nucleoside 2-deoxyribosyltransferase YtoQ 6 145 4.5E-65 T 13-10-2018 IPR019884 YtoQ family protein COP00_22765 42df2f9170c77d87652a898ea899de3d 244 Gene3D G3DSA:3.40.50.1820 21 240 1.6E-6 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold COP00_22765 42df2f9170c77d87652a898ea899de3d 244 SUPERFAMILY SSF53474 52 241 9.13E-11 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold COP00_21165 120b92cc57ea1a7c73b288235bca12b3 361 SMART SM00478 48 199 2.5E-51 T 13-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 COP00_21165 120b92cc57ea1a7c73b288235bca12b3 361 Pfam PF00633 Helix-hairpin-helix motif 108 137 6.7E-6 T 13-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 COP00_21165 120b92cc57ea1a7c73b288235bca12b3 361 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 44 176 3.9E-20 T 13-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 COP00_21165 120b92cc57ea1a7c73b288235bca12b3 361 Gene3D G3DSA:3.90.79.10 241 361 2.6E-26 T 13-10-2018 COP00_21165 120b92cc57ea1a7c73b288235bca12b3 361 Gene3D G3DSA:1.10.340.30 30 141 1.9E-88 T 13-10-2018 COP00_21165 120b92cc57ea1a7c73b288235bca12b3 361 Pfam PF14815 NUDIX domain 244 357 9.4E-23 T 13-10-2018 IPR029119 MutY, C-terminal Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 COP00_21165 120b92cc57ea1a7c73b288235bca12b3 361 SUPERFAMILY SSF55811 229 360 7.45E-24 T 13-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 COP00_21165 120b92cc57ea1a7c73b288235bca12b3 361 Gene3D G3DSA:1.10.1670.10 19 222 1.9E-88 T 13-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 COP00_21165 120b92cc57ea1a7c73b288235bca12b3 361 SMART SM00525 200 220 4.0E-4 T 13-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 COP00_21165 120b92cc57ea1a7c73b288235bca12b3 361 SUPERFAMILY SSF48150 13 231 2.2E-73 T 13-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 COP00_21165 120b92cc57ea1a7c73b288235bca12b3 361 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 15 282 5.1E-114 T 13-10-2018 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 COP00_01335 7bb0b76192c40f8c0a083faad9f1178f 259 Gene3D G3DSA:1.10.10.10 160 259 7.4E-48 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_01335 7bb0b76192c40f8c0a083faad9f1178f 259 SUPERFAMILY SSF46785 167 256 1.8E-42 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_01335 7bb0b76192c40f8c0a083faad9f1178f 259 Pfam PF06018 CodY GAF-like domain 3 178 1.9E-83 T 13-10-2018 IPR010312 GTP-sensing transcriptional pleiotropic repressor CodY, N-terminal GO:0003677|GO:0005525 COP00_01335 7bb0b76192c40f8c0a083faad9f1178f 259 TIGRFAM TIGR02787 codY_Gpos: GTP-sensing transcriptional pleiotropic repressor CodY 3 253 3.6E-130 T 13-10-2018 IPR014154 GTP-sensing transcriptional pleiotropic repressor CodY GO:0003677|GO:0003700|GO:0005525|GO:0045892 COP00_01335 7bb0b76192c40f8c0a083faad9f1178f 259 Gene3D G3DSA:3.30.450.40 1 159 2.6E-73 T 13-10-2018 IPR029016 GAF-like domain superfamily COP00_01335 7bb0b76192c40f8c0a083faad9f1178f 259 PIRSF PIRSF011572 1 257 3.2E-125 T 13-10-2018 IPR014154 GTP-sensing transcriptional pleiotropic repressor CodY GO:0003677|GO:0003700|GO:0005525|GO:0045892 COP00_01335 7bb0b76192c40f8c0a083faad9f1178f 259 Hamap MF_00621 GTP-sensing transcriptional pleiotropic repressor CodY [codY]. 1 259 151.887 T 13-10-2018 IPR014154 GTP-sensing transcriptional pleiotropic repressor CodY GO:0003677|GO:0003700|GO:0005525|GO:0045892 COP00_01335 7bb0b76192c40f8c0a083faad9f1178f 259 Pfam PF08222 CodY helix-turn-helix domain 198 257 1.3E-37 T 13-10-2018 IPR013198 GTP-sensing helix-turn-helix, CodY, C-terminal COP00_20285 1d29321c76336ff2752a14a3f16f9e41 667 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 326 341 - T 13-10-2018 IPR033136 NAD-dependent DNA ligase, conserved site COP00_20285 1d29321c76336ff2752a14a3f16f9e41 667 Gene3D G3DSA:1.10.150.20 499 578 2.6E-27 T 13-10-2018 COP00_20285 1d29321c76336ff2752a14a3f16f9e41 667 Hamap MF_01588 DNA ligase [ligA]. 4 665 54.736 T 13-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 COP00_20285 1d29321c76336ff2752a14a3f16f9e41 667 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 5 313 9.2E-135 T 13-10-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 COP00_20285 1d29321c76336ff2752a14a3f16f9e41 667 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 13 661 1.0E-281 T 13-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 COP00_20285 1d29321c76336ff2752a14a3f16f9e41 667 Pfam PF12826 Helix-hairpin-helix motif 504 566 8.2E-25 T 13-10-2018 COP00_20285 1d29321c76336ff2752a14a3f16f9e41 667 SUPERFAMILY SSF50249 312 395 6.68E-27 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold COP00_20285 1d29321c76336ff2752a14a3f16f9e41 667 Gene3D G3DSA:1.10.150.20 426 498 3.1E-31 T 13-10-2018 COP00_20285 1d29321c76336ff2752a14a3f16f9e41 667 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 114 143 - T 13-10-2018 IPR018239 NAD-dependent DNA ligase, active site COP00_20285 1d29321c76336ff2752a14a3f16f9e41 667 Gene3D G3DSA:3.30.470.90 73 312 1.1E-102 T 13-10-2018 COP00_20285 1d29321c76336ff2752a14a3f16f9e41 667 Gene3D G3DSA:3.40.50.10190 579 666 5.0E-26 T 13-10-2018 IPR036420 BRCT domain superfamily COP00_20285 1d29321c76336ff2752a14a3f16f9e41 667 SUPERFAMILY SSF47781 399 579 4.08E-66 T 13-10-2018 IPR010994 RuvA domain 2-like COP00_20285 1d29321c76336ff2752a14a3f16f9e41 667 Gene3D G3DSA:2.40.50.140 313 385 1.3E-29 T 13-10-2018 COP00_20285 1d29321c76336ff2752a14a3f16f9e41 667 SUPERFAMILY SSF56091 5 313 2.16E-123 T 13-10-2018 COP00_20285 1d29321c76336ff2752a14a3f16f9e41 667 SUPERFAMILY SSF52113 588 663 1.96E-19 T 13-10-2018 IPR036420 BRCT domain superfamily COP00_20285 1d29321c76336ff2752a14a3f16f9e41 667 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 592 659 8.2E-12 T 13-10-2018 IPR001357 BRCT domain COP00_20285 1d29321c76336ff2752a14a3f16f9e41 667 Gene3D G3DSA:1.10.287.610 1 72 7.0E-28 T 13-10-2018 COP00_20285 1d29321c76336ff2752a14a3f16f9e41 667 SMART SM00292 591 667 4.6E-12 T 13-10-2018 IPR001357 BRCT domain COP00_20285 1d29321c76336ff2752a14a3f16f9e41 667 PIRSF PIRSF001604 1 667 3.7E-263 T 13-10-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 COP00_20285 1d29321c76336ff2752a14a3f16f9e41 667 Pfam PF14520 Helix-hairpin-helix domain 442 494 0.0011 T 13-10-2018 COP00_20285 1d29321c76336ff2752a14a3f16f9e41 667 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 317 393 4.6E-33 T 13-10-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 COP00_20285 1d29321c76336ff2752a14a3f16f9e41 667 SMART SM00278 440 459 140.0 T 13-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 COP00_20285 1d29321c76336ff2752a14a3f16f9e41 667 SMART SM00278 538 557 0.3 T 13-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 COP00_20285 1d29321c76336ff2752a14a3f16f9e41 667 SMART SM00278 474 493 83.0 T 13-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 COP00_20285 1d29321c76336ff2752a14a3f16f9e41 667 Gene3D G3DSA:2.20.70.80 386 423 5.5E-12 T 13-10-2018 COP00_20285 1d29321c76336ff2752a14a3f16f9e41 667 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 402 428 8.9E-11 T 13-10-2018 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 COP00_20285 1d29321c76336ff2752a14a3f16f9e41 667 SMART SM00532 5 442 2.2E-290 T 13-10-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 COP00_24190 f7c435a267d8a5714d5cf58018409210 697 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 546 560 1.6E-36 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 COP00_24190 f7c435a267d8a5714d5cf58018409210 697 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 439 457 1.6E-36 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 COP00_24190 f7c435a267d8a5714d5cf58018409210 697 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 484 502 1.6E-36 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 COP00_24190 f7c435a267d8a5714d5cf58018409210 697 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 513 531 1.6E-36 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 COP00_24190 f7c435a267d8a5714d5cf58018409210 697 SUPERFAMILY SSF52540 70 372 2.33E-68 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_24190 f7c435a267d8a5714d5cf58018409210 697 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 113 244 2.3E-13 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 COP00_24190 f7c435a267d8a5714d5cf58018409210 697 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 469 487 - T 13-10-2018 IPR028299 ClpA/B, conserved site 2 COP00_24190 f7c435a267d8a5714d5cf58018409210 697 Pfam PF02151 UvrB/uvrC motif 323 356 2.0E-6 T 13-10-2018 IPR001943 UVR domain GO:0005515 COP00_24190 f7c435a267d8a5714d5cf58018409210 697 SMART SM00382 108 252 1.9E-13 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_24190 f7c435a267d8a5714d5cf58018409210 697 SMART SM00382 435 607 3.1E-12 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_24190 f7c435a267d8a5714d5cf58018409210 697 SMART SM01086 606 693 1.0E-29 T 13-10-2018 IPR019489 Clp ATPase, C-terminal COP00_24190 f7c435a267d8a5714d5cf58018409210 697 Gene3D G3DSA:3.40.50.300 58 250 1.4E-66 T 13-10-2018 COP00_24190 f7c435a267d8a5714d5cf58018409210 697 Gene3D G3DSA:3.40.50.300 388 604 1.1E-83 T 13-10-2018 COP00_24190 f7c435a267d8a5714d5cf58018409210 697 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 606 683 2.6E-23 T 13-10-2018 IPR019489 Clp ATPase, C-terminal COP00_24190 f7c435a267d8a5714d5cf58018409210 697 Gene3D G3DSA:1.10.8.60 254 379 6.3E-36 T 13-10-2018 COP00_24190 f7c435a267d8a5714d5cf58018409210 697 Gene3D G3DSA:4.10.860.10 316 365 6.3E-36 T 13-10-2018 COP00_24190 f7c435a267d8a5714d5cf58018409210 697 Pfam PF07724 AAA domain (Cdc48 subfamily) 434 600 1.9E-52 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 COP00_24190 f7c435a267d8a5714d5cf58018409210 697 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 203 215 - T 13-10-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 COP00_24190 f7c435a267d8a5714d5cf58018409210 697 Gene3D G3DSA:1.10.8.60 606 694 8.8E-24 T 13-10-2018 COP00_24190 f7c435a267d8a5714d5cf58018409210 697 SUPERFAMILY SSF52540 384 680 1.23E-81 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_08220 a1a6381488efcec237a27e4892fc1d3b 592 Hamap MF_00044 Aspartate--tRNA(Asp/Asn) ligase [aspS]. 3 587 34.851 T 13-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 COP00_08220 a1a6381488efcec237a27e4892fc1d3b 592 Gene3D G3DSA:2.40.50.140 1 109 1.6E-34 T 13-10-2018 COP00_08220 a1a6381488efcec237a27e4892fc1d3b 592 SUPERFAMILY SSF55261 295 422 6.38E-43 T 13-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 COP00_08220 a1a6381488efcec237a27e4892fc1d3b 592 Pfam PF01336 OB-fold nucleic acid binding domain 20 105 8.1E-18 T 13-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 COP00_08220 a1a6381488efcec237a27e4892fc1d3b 592 SUPERFAMILY SSF55681 118 586 2.58E-109 T 13-10-2018 COP00_08220 a1a6381488efcec237a27e4892fc1d3b 592 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 2 587 1.3E-268 T 13-10-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 COP00_08220 a1a6381488efcec237a27e4892fc1d3b 592 Gene3D G3DSA:3.30.930.10 122 584 2.3E-197 T 13-10-2018 COP00_08220 a1a6381488efcec237a27e4892fc1d3b 592 Pfam PF00152 tRNA synthetases class II (D, K and N) 123 560 6.6E-110 T 13-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 COP00_08220 a1a6381488efcec237a27e4892fc1d3b 592 Gene3D G3DSA:3.30.1360.30 278 422 2.3E-197 T 13-10-2018 IPR004115 GAD-like domain superfamily GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 COP00_08220 a1a6381488efcec237a27e4892fc1d3b 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 521 535 2.4E-27 T 13-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 COP00_08220 a1a6381488efcec237a27e4892fc1d3b 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 477 493 2.4E-27 T 13-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 COP00_08220 a1a6381488efcec237a27e4892fc1d3b 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 196 208 2.4E-27 T 13-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 COP00_08220 a1a6381488efcec237a27e4892fc1d3b 592 PRINTS PR01042 Aspartyl-tRNA synthetase signature 213 226 2.4E-27 T 13-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 COP00_08220 a1a6381488efcec237a27e4892fc1d3b 592 Pfam PF02938 GAD domain 314 408 1.3E-30 T 13-10-2018 IPR029351 GAD domain Reactome: R-HSA-379726 COP00_08220 a1a6381488efcec237a27e4892fc1d3b 592 SUPERFAMILY SSF50249 4 108 1.47E-33 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold COP00_16350 4abeac90e214abfc179eaff0632587cf 829 SMART SM00331 594 806 7.1E-44 T 13-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 COP00_16350 4abeac90e214abfc179eaff0632587cf 829 SUPERFAMILY SSF81606 603 807 4.05E-21 T 13-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 COP00_16350 4abeac90e214abfc179eaff0632587cf 829 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 622 806 1.0E-36 T 13-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 COP00_16350 4abeac90e214abfc179eaff0632587cf 829 Gene3D G3DSA:3.60.40.10 588 829 1.4E-55 T 13-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 COP00_16350 4abeac90e214abfc179eaff0632587cf 829 TIGRFAM TIGR02865 spore_II_E: stage II sporulation protein E 44 806 1.9E-294 T 13-10-2018 IPR014221 Sporulation stage II, protein E KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 COP00_16350 4abeac90e214abfc179eaff0632587cf 829 SMART SM00332 322 804 4.8E-6 T 13-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 COP00_01905 78e1bd8ef7aa16e97f604b7e997826db 145 SUPERFAMILY SSF46785 1 60 2.93E-17 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_01905 78e1bd8ef7aa16e97f604b7e997826db 145 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 1 17 2.4E-13 T 13-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 COP00_01905 78e1bd8ef7aa16e97f604b7e997826db 145 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 47 2.4E-13 T 13-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 COP00_01905 78e1bd8ef7aa16e97f604b7e997826db 145 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 17 28 2.4E-13 T 13-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 COP00_01905 78e1bd8ef7aa16e97f604b7e997826db 145 Pfam PF13404 AsnC-type helix-turn-helix domain 1 42 2.5E-14 T 13-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 COP00_01905 78e1bd8ef7aa16e97f604b7e997826db 145 ProSitePatterns PS00519 AsnC-type HTH domain signature. 19 45 - T 13-10-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site COP00_01905 78e1bd8ef7aa16e97f604b7e997826db 145 Gene3D G3DSA:1.10.10.10 1 51 5.6E-20 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_01905 78e1bd8ef7aa16e97f604b7e997826db 145 Gene3D G3DSA:3.30.70.920 52 137 6.8E-19 T 13-10-2018 COP00_01905 78e1bd8ef7aa16e97f604b7e997826db 145 SUPERFAMILY SSF54909 64 134 1.13E-12 T 13-10-2018 IPR011008 Dimeric alpha-beta barrel COP00_01905 78e1bd8ef7aa16e97f604b7e997826db 145 SMART SM00344 1 105 2.1E-39 T 13-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 COP00_01905 78e1bd8ef7aa16e97f604b7e997826db 145 Pfam PF01037 Lrp/AsnC ligand binding domain 75 131 1.9E-10 T 13-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain COP00_13795 884cb5516b3a779290c514167dd9937a 131 SUPERFAMILY SSF51344 2 83 1.22E-24 T 13-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 COP00_13795 884cb5516b3a779290c514167dd9937a 131 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 9 88 1.0E-38 T 13-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 COP00_13795 884cb5516b3a779290c514167dd9937a 131 Gene3D G3DSA:2.60.15.10 1 88 2.3E-33 T 13-10-2018 IPR036771 F0F1 ATP synthase delta/epsilon subunit, N-terminal Reactome: R-HSA-163210|Reactome: R-HSA-8949613 COP00_13795 884cb5516b3a779290c514167dd9937a 131 Gene3D G3DSA:1.20.5.440 89 131 1.5E-15 T 13-10-2018 COP00_13795 884cb5516b3a779290c514167dd9937a 131 SUPERFAMILY SSF46604 86 130 1.88E-10 T 13-10-2018 IPR036794 ATP synthase delta/epsilon subunit, C-terminal domain superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 COP00_13795 884cb5516b3a779290c514167dd9937a 131 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 86 131 1.6E-15 T 13-10-2018 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain COP00_13795 884cb5516b3a779290c514167dd9937a 131 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 3 130 3.6E-41 T 13-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 COP00_13795 884cb5516b3a779290c514167dd9937a 131 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 2 129 23.209 T 13-10-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 COP00_13795 884cb5516b3a779290c514167dd9937a 131 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 4 82 3.3E-29 T 13-10-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 COP00_13060 3e5c408b4b0645fd73fb721f31faba46 494 Pfam PF07196 Flagellin hook IN motif 120 182 1.9E-8 T 13-10-2018 IPR010810 Flagellin hook, IN motif GO:0006928|GO:0009288|GO:0044781 COP00_13060 3e5c408b4b0645fd73fb721f31faba46 494 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 221 483 2.6E-58 T 13-10-2018 IPR010809 Flagellar hook-associated protein 2, C-terminal GO:0007155|GO:0009288 COP00_13060 3e5c408b4b0645fd73fb721f31faba46 494 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 10 103 3.6E-27 T 13-10-2018 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 COP00_08700 28d11026913afe1dd1d75a9e6f000e35 274 Pfam PF01177 Asp/Glu/Hydantoin racemase 6 216 2.6E-39 T 13-10-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 COP00_08700 28d11026913afe1dd1d75a9e6f000e35 274 Gene3D G3DSA:3.40.50.1860 96 208 5.7E-96 T 13-10-2018 COP00_08700 28d11026913afe1dd1d75a9e6f000e35 274 TIGRFAM TIGR00067 glut_race: glutamate racemase 6 255 1.2E-97 T 13-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 COP00_08700 28d11026913afe1dd1d75a9e6f000e35 274 Gene3D G3DSA:3.40.50.1860 6 255 5.7E-96 T 13-10-2018 COP00_08700 28d11026913afe1dd1d75a9e6f000e35 274 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 181 191 - T 13-10-2018 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 COP00_08700 28d11026913afe1dd1d75a9e6f000e35 274 SUPERFAMILY SSF53681 110 263 2.88E-40 T 13-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 COP00_08700 28d11026913afe1dd1d75a9e6f000e35 274 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 71 79 - T 13-10-2018 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 COP00_08700 28d11026913afe1dd1d75a9e6f000e35 274 SUPERFAMILY SSF53681 5 108 5.49E-34 T 13-10-2018 IPR001920 Asp/Glu racemase GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 COP00_08700 28d11026913afe1dd1d75a9e6f000e35 274 Hamap MF_00258 Glutamate racemase [murI]. 4 257 40.853 T 13-10-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 COP00_20630 2dbc1c52159bf92f7273e0f364104bd7 273 Gene3D G3DSA:3.60.15.10 13 246 1.3E-40 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like COP00_20630 2dbc1c52159bf92f7273e0f364104bd7 273 SUPERFAMILY SSF56281 24 239 2.24E-38 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like COP00_20630 2dbc1c52159bf92f7273e0f364104bd7 273 Pfam PF00753 Metallo-beta-lactamase superfamily 39 200 1.2E-16 T 13-10-2018 IPR001279 Metallo-beta-lactamase COP00_20630 2dbc1c52159bf92f7273e0f364104bd7 273 SMART SM00849 40 231 3.2E-26 T 13-10-2018 IPR001279 Metallo-beta-lactamase COP00_23200 d019e13b14217ae3b98b3fc1da90c334 109 SUPERFAMILY SSF54197 5 105 2.17E-20 T 13-10-2018 IPR036265 HIT-like superfamily COP00_23200 d019e13b14217ae3b98b3fc1da90c334 109 Pfam PF01230 HIT domain 16 106 2.9E-14 T 13-10-2018 IPR001310 Histidine triad (HIT) protein COP00_23200 d019e13b14217ae3b98b3fc1da90c334 109 Gene3D G3DSA:3.30.428.10 2 108 5.7E-21 T 13-10-2018 IPR036265 HIT-like superfamily COP00_14810 27dde9e2be00bf536b463583a6090a10 625 Pfam PF02687 FtsX-like permease family 85 174 1.3E-7 T 13-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 COP00_14810 27dde9e2be00bf536b463583a6090a10 625 PIRSF PIRSF018968 1 624 3.9E-135 T 13-10-2018 IPR027022 ABC transporter permease protein, BceB-type GO:0055085 COP00_09065 a7c92cf95f0fadb56b9505fedbb2b0d4 275 Pfam PF06827 Zinc finger found in FPG and IleRS 247 274 2.4E-9 T 13-10-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 COP00_09065 a7c92cf95f0fadb56b9505fedbb2b0d4 275 SUPERFAMILY SSF81624 2 139 3.66E-43 T 13-10-2018 IPR035937 MutM-like, N-terminal COP00_09065 a7c92cf95f0fadb56b9505fedbb2b0d4 275 SUPERFAMILY SSF46946 134 223 6.8E-31 T 13-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 COP00_09065 a7c92cf95f0fadb56b9505fedbb2b0d4 275 SMART SM01232 134 226 2.5E-47 T 13-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 COP00_09065 a7c92cf95f0fadb56b9505fedbb2b0d4 275 Gene3D G3DSA:1.10.8.50 136 275 1.5E-50 T 13-10-2018 COP00_09065 a7c92cf95f0fadb56b9505fedbb2b0d4 275 Gene3D G3DSA:3.20.190.10 2 130 4.9E-42 T 13-10-2018 IPR035937 MutM-like, N-terminal COP00_09065 a7c92cf95f0fadb56b9505fedbb2b0d4 275 ProSitePatterns PS01242 Zinc finger FPG-type signature. 249 273 - T 13-10-2018 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 COP00_09065 a7c92cf95f0fadb56b9505fedbb2b0d4 275 SMART SM00898 2 118 3.1E-52 T 13-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 COP00_09065 a7c92cf95f0fadb56b9505fedbb2b0d4 275 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 2 117 5.8E-33 T 13-10-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 COP00_09065 a7c92cf95f0fadb56b9505fedbb2b0d4 275 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 273 4.0E-116 T 13-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 COP00_09065 a7c92cf95f0fadb56b9505fedbb2b0d4 275 SUPERFAMILY SSF57716 223 274 7.61E-17 T 13-10-2018 COP00_09065 a7c92cf95f0fadb56b9505fedbb2b0d4 275 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 134 223 7.6E-33 T 13-10-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 COP00_09065 a7c92cf95f0fadb56b9505fedbb2b0d4 275 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 274 45.544 T 13-10-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 COP00_17200 8e44ec819bc07d2c7f5569e505d7b621 237 Pfam PF13411 MerR HTH family regulatory protein 122 189 2.1E-16 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 COP00_17200 8e44ec819bc07d2c7f5569e505d7b621 237 SUPERFAMILY SSF46955 122 229 9.16E-20 T 13-10-2018 IPR009061 Putative DNA-binding domain superfamily COP00_17200 8e44ec819bc07d2c7f5569e505d7b621 237 Gene3D G3DSA:1.10.1660.10 114 226 1.4E-22 T 13-10-2018 COP00_17200 8e44ec819bc07d2c7f5569e505d7b621 237 Gene3D G3DSA:1.10.1660.10 1 107 8.6E-14 T 13-10-2018 COP00_17200 8e44ec819bc07d2c7f5569e505d7b621 237 SMART SM00422 4 73 5.7E-4 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 COP00_17200 8e44ec819bc07d2c7f5569e505d7b621 237 SMART SM00422 122 194 4.4E-16 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 COP00_17200 8e44ec819bc07d2c7f5569e505d7b621 237 Pfam PF00376 MerR family regulatory protein 8 42 1.1E-10 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 COP00_17200 8e44ec819bc07d2c7f5569e505d7b621 237 SUPERFAMILY SSF46955 4 105 2.93E-12 T 13-10-2018 IPR009061 Putative DNA-binding domain superfamily COP00_04910 433488bc725350e0c1ffd9f5a8ea20f7 944 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 17 50 6.6E-7 T 13-10-2018 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 COP00_04910 433488bc725350e0c1ffd9f5a8ea20f7 944 Hamap MF_01169 2-oxoglutarate dehydrogenase E1 component [odhA]. 2 942 23.903 T 13-10-2018 IPR023784 2-oxoglutarate dehydrogenase E1 component, bacterial KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 COP00_04910 433488bc725350e0c1ffd9f5a8ea20f7 944 Gene3D G3DSA:1.10.287.1150 69 151 5.9E-5 T 13-10-2018 COP00_04910 433488bc725350e0c1ffd9f5a8ea20f7 944 SMART SM00861 595 791 3.6E-46 T 13-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain COP00_04910 433488bc725350e0c1ffd9f5a8ea20f7 944 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 16 938 0.0 T 13-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 COP00_04910 433488bc725350e0c1ffd9f5a8ea20f7 944 PIRSF PIRSF000157 1 942 0.0 T 13-10-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 COP00_04910 433488bc725350e0c1ffd9f5a8ea20f7 944 Pfam PF02779 Transketolase, pyrimidine binding domain 594 791 3.9E-59 T 13-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain COP00_04910 433488bc725350e0c1ffd9f5a8ea20f7 944 Gene3D G3DSA:3.40.50.970 153 535 3.3E-132 T 13-10-2018 COP00_04910 433488bc725350e0c1ffd9f5a8ea20f7 944 Gene3D G3DSA:3.40.50.12470 553 813 1.6E-154 T 13-10-2018 COP00_04910 433488bc725350e0c1ffd9f5a8ea20f7 944 Gene3D G3DSA:3.40.50.11610 731 938 1.6E-154 T 13-10-2018 COP00_04910 433488bc725350e0c1ffd9f5a8ea20f7 944 SUPERFAMILY SSF52518 577 798 7.65E-44 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold COP00_04910 433488bc725350e0c1ffd9f5a8ea20f7 944 Pfam PF00676 Dehydrogenase E1 component 220 531 4.9E-86 T 13-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 COP00_04910 433488bc725350e0c1ffd9f5a8ea20f7 944 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 796 939 3.4E-38 T 13-10-2018 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 COP00_04910 433488bc725350e0c1ffd9f5a8ea20f7 944 SUPERFAMILY SSF52518 150 528 3.11E-70 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold COP00_10900 819d6c96a4ab386fd93e498bf21f6b38 157 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 12 60 2.1E-6 T 13-10-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 COP00_10900 819d6c96a4ab386fd93e498bf21f6b38 157 Gene3D G3DSA:3.10.20.30 5 81 4.5E-30 T 13-10-2018 IPR012675 Beta-grasp domain superfamily COP00_10900 819d6c96a4ab386fd93e498bf21f6b38 157 Pfam PF01799 [2Fe-2S] binding domain 79 148 7.6E-27 T 13-10-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 COP00_10900 819d6c96a4ab386fd93e498bf21f6b38 157 Gene3D G3DSA:1.10.150.120 82 157 4.1E-28 T 13-10-2018 COP00_10900 819d6c96a4ab386fd93e498bf21f6b38 157 SUPERFAMILY SSF54292 6 91 9.04E-23 T 13-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 COP00_10900 819d6c96a4ab386fd93e498bf21f6b38 157 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 45 53 - T 13-10-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 COP00_10900 819d6c96a4ab386fd93e498bf21f6b38 157 SUPERFAMILY SSF47741 79 152 5.76E-30 T 13-10-2018 IPR036884 [2Fe-2S]-binding domain superfamily COP00_15700 241874e21328f2ce106a57150aa2bfa0 403 Gene3D G3DSA:2.30.42.10 302 400 9.6E-24 T 13-10-2018 COP00_15700 241874e21328f2ce106a57150aa2bfa0 403 PRINTS PR00834 HtrA/DegQ protease family signature 232 249 3.9E-36 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 COP00_15700 241874e21328f2ce106a57150aa2bfa0 403 PRINTS PR00834 HtrA/DegQ protease family signature 345 357 3.9E-36 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 COP00_15700 241874e21328f2ce106a57150aa2bfa0 403 PRINTS PR00834 HtrA/DegQ protease family signature 254 271 3.9E-36 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 COP00_15700 241874e21328f2ce106a57150aa2bfa0 403 PRINTS PR00834 HtrA/DegQ protease family signature 188 212 3.9E-36 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 COP00_15700 241874e21328f2ce106a57150aa2bfa0 403 PRINTS PR00834 HtrA/DegQ protease family signature 147 167 3.9E-36 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 COP00_15700 241874e21328f2ce106a57150aa2bfa0 403 PRINTS PR00834 HtrA/DegQ protease family signature 126 138 3.9E-36 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 COP00_15700 241874e21328f2ce106a57150aa2bfa0 403 Gene3D G3DSA:2.40.10.10 179 301 2.6E-37 T 13-10-2018 COP00_15700 241874e21328f2ce106a57150aa2bfa0 403 SUPERFAMILY SSF50156 298 396 4.21E-17 T 13-10-2018 IPR036034 PDZ superfamily GO:0005515 COP00_15700 241874e21328f2ce106a57150aa2bfa0 403 SMART SM00228 299 387 1.6E-8 T 13-10-2018 IPR001478 PDZ domain GO:0005515 COP00_15700 241874e21328f2ce106a57150aa2bfa0 403 Pfam PF13365 Trypsin-like peptidase domain 114 261 1.5E-31 T 13-10-2018 COP00_15700 241874e21328f2ce106a57150aa2bfa0 403 SUPERFAMILY SSF50494 81 295 2.18E-54 T 13-10-2018 IPR009003 Peptidase S1, PA clan COP00_15700 241874e21328f2ce106a57150aa2bfa0 403 Gene3D G3DSA:2.40.10.10 71 178 4.4E-25 T 13-10-2018 COP00_15700 241874e21328f2ce106a57150aa2bfa0 403 Pfam PF13180 PDZ domain 299 396 2.8E-20 T 13-10-2018 IPR001478 PDZ domain GO:0005515 COP00_08630 3864ac7375c0d5e8b97f636d391ebef0 304 ProSitePatterns PS00770 Aminotransferases class-IV signature. 188 217 - T 13-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 COP00_08630 3864ac7375c0d5e8b97f636d391ebef0 304 SUPERFAMILY SSF56752 6 288 1.07E-92 T 13-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 COP00_08630 3864ac7375c0d5e8b97f636d391ebef0 304 Gene3D G3DSA:3.30.470.10 5 129 8.5E-48 T 13-10-2018 COP00_08630 3864ac7375c0d5e8b97f636d391ebef0 304 Pfam PF01063 Amino-transferase class IV 35 261 5.2E-59 T 13-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 COP00_08630 3864ac7375c0d5e8b97f636d391ebef0 304 TIGRFAM TIGR01122 ilvE_I: branched-chain amino acid aminotransferase 10 290 1.5E-100 T 13-10-2018 IPR005785 Branched-chain amino acid aminotransferase I GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767 COP00_08630 3864ac7375c0d5e8b97f636d391ebef0 304 Gene3D G3DSA:3.20.10.10 130 293 1.9E-55 T 13-10-2018 COP00_10110 55a5e7e8879a23d908fc313158fa95fd 193 SUPERFAMILY SSF50800 2 180 5.07E-48 T 13-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily COP00_10110 55a5e7e8879a23d908fc313158fa95fd 193 Pfam PF03473 MOSC domain 62 176 2.5E-5 T 13-10-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 COP00_10110 55a5e7e8879a23d908fc313158fa95fd 193 Gene3D G3DSA:2.40.33.20 1 191 1.3E-75 T 13-10-2018 COP00_08865 941e16a432cd77790f3abc3ad51ba1a9 248 Pfam PF00588 SpoU rRNA Methylase family 107 244 1.2E-33 T 13-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 COP00_08865 941e16a432cd77790f3abc3ad51ba1a9 248 Gene3D G3DSA:3.40.1280.10 100 248 1.3E-48 T 13-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal COP00_08865 941e16a432cd77790f3abc3ad51ba1a9 248 SUPERFAMILY SSF55315 2 97 4.83E-22 T 13-10-2018 IPR029064 50S ribosomal protein L30e-like COP00_08865 941e16a432cd77790f3abc3ad51ba1a9 248 Gene3D G3DSA:3.30.1330.30 2 97 2.5E-23 T 13-10-2018 IPR029064 50S ribosomal protein L30e-like COP00_08865 941e16a432cd77790f3abc3ad51ba1a9 248 SMART SM00967 31 99 4.0E-12 T 13-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 COP00_08865 941e16a432cd77790f3abc3ad51ba1a9 248 SUPERFAMILY SSF75217 103 247 1.64E-39 T 13-10-2018 IPR029028 Alpha/beta knot methyltransferases COP00_08865 941e16a432cd77790f3abc3ad51ba1a9 248 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 31 97 1.0E-7 T 13-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 COP00_12860 1b392ceadc60d85db5df0e5d85c75c94 212 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 1 204 36.409 T 13-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 COP00_12860 1b392ceadc60d85db5df0e5d85c75c94 212 PIRSF PIRSF000495 1 207 3.0E-72 T 13-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 COP00_12860 1b392ceadc60d85db5df0e5d85c75c94 212 Gene3D G3DSA:3.40.50.880 1 212 2.5E-67 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like COP00_12860 1b392ceadc60d85db5df0e5d85c75c94 212 Pfam PF00117 Glutamine amidotransferase class-I 4 201 2.4E-21 T 13-10-2018 IPR017926 Glutamine amidotransferase COP00_12860 1b392ceadc60d85db5df0e5d85c75c94 212 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 2 203 2.1E-70 T 13-10-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 COP00_12860 1b392ceadc60d85db5df0e5d85c75c94 212 SUPERFAMILY SSF52317 2 203 6.95E-51 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like COP00_22745 458cbeee6eb1fc8b94bec5e6ff0f5b36 1032 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 1.3E-61 T 13-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 COP00_22745 458cbeee6eb1fc8b94bec5e6ff0f5b36 1032 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 1.3E-61 T 13-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 COP00_22745 458cbeee6eb1fc8b94bec5e6ff0f5b36 1032 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 1.3E-61 T 13-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 COP00_22745 458cbeee6eb1fc8b94bec5e6ff0f5b36 1032 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 296 325 1.3E-61 T 13-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 COP00_22745 458cbeee6eb1fc8b94bec5e6ff0f5b36 1032 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 1.3E-61 T 13-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 COP00_22745 458cbeee6eb1fc8b94bec5e6ff0f5b36 1032 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 1.3E-61 T 13-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 COP00_22745 458cbeee6eb1fc8b94bec5e6ff0f5b36 1032 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 378 396 1.3E-61 T 13-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 COP00_22745 458cbeee6eb1fc8b94bec5e6ff0f5b36 1032 Gene3D G3DSA:3.30.1490.20 683 750 3.6E-83 T 13-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 COP00_22745 458cbeee6eb1fc8b94bec5e6ff0f5b36 1032 Gene3D G3DSA:1.10.1030.10 407 548 5.8E-44 T 13-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 COP00_22745 458cbeee6eb1fc8b94bec5e6ff0f5b36 1032 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 962 0.0 T 13-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 COP00_22745 458cbeee6eb1fc8b94bec5e6ff0f5b36 1032 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 835 842 - T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 COP00_22745 458cbeee6eb1fc8b94bec5e6ff0f5b36 1032 SUPERFAMILY SSF52440 554 672 6.04E-42 T 13-10-2018 IPR016185 Pre-ATP-grasp domain superfamily COP00_22745 458cbeee6eb1fc8b94bec5e6ff0f5b36 1032 Gene3D G3DSA:3.30.470.20 664 925 3.6E-83 T 13-10-2018 COP00_22745 458cbeee6eb1fc8b94bec5e6ff0f5b36 1032 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 164 178 - T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 COP00_22745 458cbeee6eb1fc8b94bec5e6ff0f5b36 1032 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 670 872 2.9E-36 T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 COP00_22745 458cbeee6eb1fc8b94bec5e6ff0f5b36 1032 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 333 3.8E-81 T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 COP00_22745 458cbeee6eb1fc8b94bec5e6ff0f5b36 1032 SUPERFAMILY SSF52440 1 127 1.05E-47 T 13-10-2018 IPR016185 Pre-ATP-grasp domain superfamily COP00_22745 458cbeee6eb1fc8b94bec5e6ff0f5b36 1032 Gene3D G3DSA:3.30.470.20 119 401 2.9E-123 T 13-10-2018 COP00_22745 458cbeee6eb1fc8b94bec5e6ff0f5b36 1032 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1019 12.356 T 13-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 COP00_22745 458cbeee6eb1fc8b94bec5e6ff0f5b36 1032 Gene3D G3DSA:3.40.50.20 1 116 1.1E-46 T 13-10-2018 COP00_22745 458cbeee6eb1fc8b94bec5e6ff0f5b36 1032 SMART SM01096 420 542 1.2E-61 T 13-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 COP00_22745 458cbeee6eb1fc8b94bec5e6ff0f5b36 1032 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 296 303 - T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 COP00_22745 458cbeee6eb1fc8b94bec5e6ff0f5b36 1032 Gene3D G3DSA:3.40.50.20 551 659 2.3E-40 T 13-10-2018 COP00_22745 458cbeee6eb1fc8b94bec5e6ff0f5b36 1032 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 706 720 - T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 COP00_22745 458cbeee6eb1fc8b94bec5e6ff0f5b36 1032 SUPERFAMILY SSF56059 128 399 8.49E-108 T 13-10-2018 COP00_22745 458cbeee6eb1fc8b94bec5e6ff0f5b36 1032 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 424 542 1.8E-41 T 13-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 COP00_22745 458cbeee6eb1fc8b94bec5e6ff0f5b36 1032 SUPERFAMILY SSF56059 670 926 3.71E-78 T 13-10-2018 COP00_22745 458cbeee6eb1fc8b94bec5e6ff0f5b36 1032 SUPERFAMILY SSF48108 394 547 3.79E-45 T 13-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 COP00_13590 558e7824a6a7dbf7b6552fc6f15e437a 309 Hamap MF_00207 Probable manganese-dependent inorganic pyrophosphatase [ppaC]. 3 309 47.05 T 13-10-2018 IPR022934 Manganese-dependent inorganic pyrophosphatase, probable GO:0004427 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 COP00_13590 558e7824a6a7dbf7b6552fc6f15e437a 309 Gene3D G3DSA:3.90.1640.10 1 188 1.8E-81 T 13-10-2018 COP00_13590 558e7824a6a7dbf7b6552fc6f15e437a 309 Pfam PF01368 DHH family 3 146 1.2E-30 T 13-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 COP00_13590 558e7824a6a7dbf7b6552fc6f15e437a 309 Pfam PF02833 DHHA2 domain 183 305 1.2E-24 T 13-10-2018 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 COP00_13590 558e7824a6a7dbf7b6552fc6f15e437a 309 Gene3D G3DSA:3.10.310.20 191 309 3.9E-40 T 13-10-2018 IPR038222 DHHA2 domain superfamily KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 COP00_13590 558e7824a6a7dbf7b6552fc6f15e437a 309 SUPERFAMILY SSF64182 3 308 2.35E-84 T 13-10-2018 IPR038763 DHH phosphoesterase superfamily COP00_13590 558e7824a6a7dbf7b6552fc6f15e437a 309 SMART SM01131 181 307 4.1E-56 T 13-10-2018 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 COP00_11120 460d6be182de15c02d4c4d027d2067dc 446 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 344 444 1.4E-13 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase COP00_11120 460d6be182de15c02d4c4d027d2067dc 446 Gene3D G3DSA:1.10.287.130 231 299 5.7E-15 T 13-10-2018 COP00_11120 460d6be182de15c02d4c4d027d2067dc 446 Pfam PF00672 HAMP domain 182 229 7.4E-9 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 COP00_11120 460d6be182de15c02d4c4d027d2067dc 446 SUPERFAMILY SSF158472 182 230 3.14E-8 T 13-10-2018 COP00_11120 460d6be182de15c02d4c4d027d2067dc 446 SUPERFAMILY SSF47384 218 298 1.26E-14 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 COP00_11120 460d6be182de15c02d4c4d027d2067dc 446 SMART SM00304 181 233 1.4E-10 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 COP00_11120 460d6be182de15c02d4c4d027d2067dc 446 SMART SM00387 344 445 2.2E-18 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase COP00_11120 460d6be182de15c02d4c4d027d2067dc 446 PRINTS PR00344 Bacterial sensor protein C-terminal signature 397 407 6.7E-6 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 COP00_11120 460d6be182de15c02d4c4d027d2067dc 446 PRINTS PR00344 Bacterial sensor protein C-terminal signature 379 393 6.7E-6 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 COP00_11120 460d6be182de15c02d4c4d027d2067dc 446 PRINTS PR00344 Bacterial sensor protein C-terminal signature 431 444 6.7E-6 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 COP00_11120 460d6be182de15c02d4c4d027d2067dc 446 PRINTS PR00344 Bacterial sensor protein C-terminal signature 408 426 6.7E-6 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 COP00_11120 460d6be182de15c02d4c4d027d2067dc 446 Pfam PF00512 His Kinase A (phospho-acceptor) domain 236 298 1.8E-11 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 COP00_11120 460d6be182de15c02d4c4d027d2067dc 446 SUPERFAMILY SSF55874 304 445 2.75E-25 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily COP00_11120 460d6be182de15c02d4c4d027d2067dc 446 Gene3D G3DSA:3.30.565.10 307 446 3.8E-26 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily COP00_11120 460d6be182de15c02d4c4d027d2067dc 446 SMART SM00388 234 300 2.4E-12 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 COP00_11120 460d6be182de15c02d4c4d027d2067dc 446 Gene3D G3DSA:1.10.8.500 180 230 1.7E-7 T 13-10-2018 COP00_03765 3ff62ba0b7a6461835103ee846ebfb2c 489 TIGRFAM TIGR01660 narH: nitrate reductase, beta subunit 1 485 3.7E-282 T 13-10-2018 IPR006547 Nitrate reductase, beta subunit GO:0008940|GO:0009325|GO:0042126|GO:0055114 KEGG: 00910+1.7.5.1|MetaCyc: PWY-6748 COP00_03765 3ff62ba0b7a6461835103ee846ebfb2c 489 Gene3D G3DSA:1.10.3650.10 356 434 1.6E-26 T 13-10-2018 IPR038262 Nitrate reductase beta, C-terminal domain superfamily KEGG: 00910+1.7.5.1|MetaCyc: PWY-6748 COP00_03765 3ff62ba0b7a6461835103ee846ebfb2c 489 Pfam PF13247 4Fe-4S dicluster domain 172 269 4.1E-37 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain COP00_03765 3ff62ba0b7a6461835103ee846ebfb2c 489 SUPERFAMILY SSF54862 2 487 1.26E-158 T 13-10-2018 COP00_03765 3ff62ba0b7a6461835103ee846ebfb2c 489 Pfam PF14711 Respiratory nitrate reductase beta C-terminal 356 436 1.5E-28 T 13-10-2018 IPR029263 Respiratory nitrate reductase beta, C-terminal KEGG: 00910+1.7.5.1|MetaCyc: PWY-6748 COP00_03765 3ff62ba0b7a6461835103ee846ebfb2c 489 Gene3D G3DSA:3.30.70.20 1 301 4.9E-98 T 13-10-2018 COP00_04305 645b72bf292a0dd3f32c0a08ad8d11e7 368 Pfam PF13378 Enolase C-terminal domain-like 144 349 1.1E-46 T 13-10-2018 IPR029065 Enolase C-terminal domain-like COP00_04305 645b72bf292a0dd3f32c0a08ad8d11e7 368 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 18 114 3.8E-11 T 13-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain COP00_04305 645b72bf292a0dd3f32c0a08ad8d11e7 368 Gene3D G3DSA:3.30.390.10 1 106 5.7E-32 T 13-10-2018 IPR029017 Enolase-like, N-terminal COP00_04305 645b72bf292a0dd3f32c0a08ad8d11e7 368 SUPERFAMILY SSF51604 102 363 1.83E-48 T 13-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily COP00_04305 645b72bf292a0dd3f32c0a08ad8d11e7 368 SUPERFAMILY SSF54826 1 115 2.15E-26 T 13-10-2018 COP00_04305 645b72bf292a0dd3f32c0a08ad8d11e7 368 Gene3D G3DSA:3.20.20.120 107 367 2.9E-61 T 13-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily COP00_04305 645b72bf292a0dd3f32c0a08ad8d11e7 368 SMART SM00922 137 235 6.2E-11 T 13-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal COP00_23745 b3253d98d5f7fd5a3ad01aaf692052b5 578 PRINTS PR00344 Bacterial sensor protein C-terminal signature 533 551 1.0E-7 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 COP00_23745 b3253d98d5f7fd5a3ad01aaf692052b5 578 PRINTS PR00344 Bacterial sensor protein C-terminal signature 506 520 1.0E-7 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 COP00_23745 b3253d98d5f7fd5a3ad01aaf692052b5 578 PRINTS PR00344 Bacterial sensor protein C-terminal signature 560 573 1.0E-7 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 COP00_23745 b3253d98d5f7fd5a3ad01aaf692052b5 578 Pfam PF06580 Histidine kinase 376 454 4.8E-24 T 13-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 COP00_23745 b3253d98d5f7fd5a3ad01aaf692052b5 578 Gene3D G3DSA:1.20.1480.50 274 369 3.3E-7 T 13-10-2018 COP00_23745 b3253d98d5f7fd5a3ad01aaf692052b5 578 SMART SM00387 469 576 1.3E-6 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase COP00_23745 b3253d98d5f7fd5a3ad01aaf692052b5 578 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 473 575 2.4E-8 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase COP00_23745 b3253d98d5f7fd5a3ad01aaf692052b5 578 SUPERFAMILY SSF158472 307 362 1.57E-5 T 13-10-2018 COP00_23745 b3253d98d5f7fd5a3ad01aaf692052b5 578 SUPERFAMILY SSF55874 432 573 7.6E-20 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily COP00_23745 b3253d98d5f7fd5a3ad01aaf692052b5 578 Pfam PF00672 HAMP domain 309 359 2.5E-7 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 COP00_23745 b3253d98d5f7fd5a3ad01aaf692052b5 578 Gene3D G3DSA:3.30.565.10 439 577 2.4E-19 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily COP00_23745 b3253d98d5f7fd5a3ad01aaf692052b5 578 SMART SM00304 307 363 4.6E-7 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 COP00_05925 d3f3ed12c8659dede1739c825a15302c 244 Pfam PF00849 RNA pseudouridylate synthase 62 195 5.6E-25 T 13-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 COP00_05925 d3f3ed12c8659dede1739c825a15302c 244 Gene3D G3DSA:3.10.290.10 1 63 5.8E-22 T 13-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 COP00_05925 d3f3ed12c8659dede1739c825a15302c 244 Gene3D G3DSA:3.30.70.1560 123 215 1.1E-58 T 13-10-2018 COP00_05925 d3f3ed12c8659dede1739c825a15302c 244 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 99 113 - T 13-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 COP00_05925 d3f3ed12c8659dede1739c825a15302c 244 Gene3D G3DSA:3.30.70.580 64 223 1.1E-58 T 13-10-2018 COP00_05925 d3f3ed12c8659dede1739c825a15302c 244 Pfam PF01479 S4 domain 2 48 4.5E-15 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 COP00_05925 d3f3ed12c8659dede1739c825a15302c 244 SMART SM00363 2 65 1.7E-15 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 COP00_05925 d3f3ed12c8659dede1739c825a15302c 244 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 66 226 2.5E-53 T 13-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 COP00_05925 d3f3ed12c8659dede1739c825a15302c 244 SUPERFAMILY SSF55120 46 237 3.12E-45 T 13-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 COP00_05925 d3f3ed12c8659dede1739c825a15302c 244 SUPERFAMILY SSF55174 2 67 1.26E-15 T 13-10-2018 COP00_10115 e64fdee9367e1bd363888697d65cd5a6 402 Pfam PF00465 Iron-containing alcohol dehydrogenase 19 385 1.6E-118 T 13-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 COP00_10115 e64fdee9367e1bd363888697d65cd5a6 402 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 186 214 - T 13-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 COP00_10115 e64fdee9367e1bd363888697d65cd5a6 402 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 273 293 - T 13-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 COP00_10115 e64fdee9367e1bd363888697d65cd5a6 402 SUPERFAMILY SSF56796 12 396 1.7E-121 T 13-10-2018 COP00_10115 e64fdee9367e1bd363888697d65cd5a6 402 Gene3D G3DSA:1.20.1090.10 199 397 8.3E-61 T 13-10-2018 COP00_10115 e64fdee9367e1bd363888697d65cd5a6 402 Gene3D G3DSA:3.40.50.1970 3 197 3.8E-60 T 13-10-2018 COP00_06425 def96ab896ca9c04cb872f3c90fb1a5d 469 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 119 144 8.4E-89 T 13-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 COP00_06425 def96ab896ca9c04cb872f3c90fb1a5d 469 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 167 195 8.4E-89 T 13-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 COP00_06425 def96ab896ca9c04cb872f3c90fb1a5d 469 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 4 27 8.4E-89 T 13-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 COP00_06425 def96ab896ca9c04cb872f3c90fb1a5d 469 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 357 379 8.4E-89 T 13-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 COP00_06425 def96ab896ca9c04cb872f3c90fb1a5d 469 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 249 276 8.4E-89 T 13-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 COP00_06425 def96ab896ca9c04cb872f3c90fb1a5d 469 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 66 95 8.4E-89 T 13-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 COP00_06425 def96ab896ca9c04cb872f3c90fb1a5d 469 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 5 168 1.8E-53 T 13-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 COP00_06425 def96ab896ca9c04cb872f3c90fb1a5d 469 PIRSF PIRSF000109 1 469 1.5E-246 T 13-10-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 COP00_06425 def96ab896ca9c04cb872f3c90fb1a5d 469 SUPERFAMILY SSF51735 4 176 9.52E-55 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily COP00_06425 def96ab896ca9c04cb872f3c90fb1a5d 469 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 178 467 4.0E-138 T 13-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 COP00_06425 def96ab896ca9c04cb872f3c90fb1a5d 469 Gene3D G3DSA:3.40.50.720 1 179 1.1E-59 T 13-10-2018 COP00_06425 def96ab896ca9c04cb872f3c90fb1a5d 469 SUPERFAMILY SSF48179 176 468 1.56E-134 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 COP00_06425 def96ab896ca9c04cb872f3c90fb1a5d 469 SMART SM01350 178 468 3.2E-235 T 13-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 COP00_06425 def96ab896ca9c04cb872f3c90fb1a5d 469 TIGRFAM TIGR00873 gnd: 6-phosphogluconate dehydrogenase (decarboxylating) 5 468 1.8E-234 T 13-10-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 COP00_06425 def96ab896ca9c04cb872f3c90fb1a5d 469 Gene3D G3DSA:1.10.1040.10 180 435 7.0E-113 T 13-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 COP00_06425 def96ab896ca9c04cb872f3c90fb1a5d 469 ProSitePatterns PS00461 6-phosphogluconate dehydrogenase signature. 253 265 - T 13-10-2018 IPR006184 6-phosphogluconate-binding site GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 COP00_06425 def96ab896ca9c04cb872f3c90fb1a5d 469 Gene3D G3DSA:1.20.5.320 436 469 4.0E-22 T 13-10-2018 COP00_04700 298bfa61c4a1021bffb1270b31ad5971 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 4.6E-6 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_04700 298bfa61c4a1021bffb1270b31ad5971 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 4.6E-6 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_04700 298bfa61c4a1021bffb1270b31ad5971 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 4.6E-6 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_04700 298bfa61c4a1021bffb1270b31ad5971 264 Pfam PF00106 short chain dehydrogenase 8 193 1.0E-42 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_04700 298bfa61c4a1021bffb1270b31ad5971 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 223 243 8.8E-29 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_04700 298bfa61c4a1021bffb1270b31ad5971 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 8.8E-29 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_04700 298bfa61c4a1021bffb1270b31ad5971 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 8.8E-29 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_04700 298bfa61c4a1021bffb1270b31ad5971 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 8.8E-29 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_04700 298bfa61c4a1021bffb1270b31ad5971 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 8.8E-29 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_04700 298bfa61c4a1021bffb1270b31ad5971 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 8.8E-29 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_04700 298bfa61c4a1021bffb1270b31ad5971 264 Gene3D G3DSA:3.40.50.720 2 264 9.3E-73 T 13-10-2018 COP00_04700 298bfa61c4a1021bffb1270b31ad5971 264 SUPERFAMILY SSF51735 6 259 5.64E-63 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily COP00_20345 7f69bf61449f7ff4009a2346de3a67a1 179 Pfam PF13302 Acetyltransferase (GNAT) domain 7 151 1.4E-29 T 13-10-2018 IPR000182 GNAT domain COP00_20345 7f69bf61449f7ff4009a2346de3a67a1 179 SUPERFAMILY SSF55729 5 175 3.96E-48 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase COP00_20345 7f69bf61449f7ff4009a2346de3a67a1 179 Gene3D G3DSA:3.40.630.30 3 178 2.3E-51 T 13-10-2018 COP00_00490 224ee2f654f95be57f630e90579dd89c 43 ProDom PD049302 YKPC PRECURSOR SIGNAL 1 43 3.0E-6 T 13-10-2018 IPR035379 Uncharacterized protein YkpC COP00_00490 224ee2f654f95be57f630e90579dd89c 43 Pfam PF17447 Uncharacterized protein YkpC 29 42 1.7E-6 T 13-10-2018 IPR035379 Uncharacterized protein YkpC COP00_10885 80db7a49a23576ffea4bfb6b7c6fac3c 292 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 81 283 5.7E-17 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 COP00_10885 80db7a49a23576ffea4bfb6b7c6fac3c 292 SUPERFAMILY SSF161098 50 280 2.49E-56 T 13-10-2018 IPR035906 MetI-like superfamily COP00_10885 80db7a49a23576ffea4bfb6b7c6fac3c 292 Gene3D G3DSA:1.10.3720.10 46 290 2.4E-68 T 13-10-2018 IPR035906 MetI-like superfamily COP00_12950 1542d2e80c699ba62c9341423fdfeddc 364 Pfam PF13349 Putative adhesin 167 351 1.4E-13 T 13-10-2018 IPR025164 Putative adhesin COP00_12950 1542d2e80c699ba62c9341423fdfeddc 364 PIRSF PIRSF012569 1 364 4.9E-137 T 13-10-2018 IPR016599 Uncharacterised conserved protein UCP012569 COP00_11460 1732e8d47727b80e4a8944af89a5476c 811 SUPERFAMILY SSF81653 301 397 1.96E-29 T 13-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 COP00_11460 1732e8d47727b80e4a8944af89a5476c 811 Pfam PF00403 Heavy-metal-associated domain 77 137 7.5E-15 T 13-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 COP00_11460 1732e8d47727b80e4a8944af89a5476c 811 Pfam PF00403 Heavy-metal-associated domain 8 68 2.1E-16 T 13-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 COP00_11460 1732e8d47727b80e4a8944af89a5476c 811 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 74 138 5.1E-11 T 13-10-2018 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 Reactome: R-HSA-936837 COP00_11460 1732e8d47727b80e4a8944af89a5476c 811 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 7 70 5.3E-11 T 13-10-2018 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 Reactome: R-HSA-936837 COP00_11460 1732e8d47727b80e4a8944af89a5476c 811 ProSitePatterns PS01047 Heavy-metal-associated domain. 11 40 - T 13-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 COP00_11460 1732e8d47727b80e4a8944af89a5476c 811 Pfam PF00122 E1-E2 ATPase 298 478 1.8E-58 T 13-10-2018 COP00_11460 1732e8d47727b80e4a8944af89a5476c 811 SUPERFAMILY SSF81665 250 777 6.28E-14 T 13-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 COP00_11460 1732e8d47727b80e4a8944af89a5476c 811 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 270 782 9.1E-93 T 13-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 COP00_11460 1732e8d47727b80e4a8944af89a5476c 811 Gene3D G3DSA:2.70.150.20 290 402 7.1E-44 T 13-10-2018 COP00_11460 1732e8d47727b80e4a8944af89a5476c 811 PRINTS PR00942 Copper-transporting ATPase 1 signature 6 31 1.3E-16 T 13-10-2018 COP00_11460 1732e8d47727b80e4a8944af89a5476c 811 PRINTS PR00942 Copper-transporting ATPase 1 signature 32 55 1.3E-16 T 13-10-2018 COP00_11460 1732e8d47727b80e4a8944af89a5476c 811 PRINTS PR00942 Copper-transporting ATPase 1 signature 213 238 1.3E-16 T 13-10-2018 COP00_11460 1732e8d47727b80e4a8944af89a5476c 811 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 212 801 1.8E-186 T 13-10-2018 COP00_11460 1732e8d47727b80e4a8944af89a5476c 811 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 230 800 2.0E-202 T 13-10-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 COP00_11460 1732e8d47727b80e4a8944af89a5476c 811 Gene3D G3DSA:3.30.70.100 72 148 3.4E-23 T 13-10-2018 COP00_11460 1732e8d47727b80e4a8944af89a5476c 811 PRINTS PR00943 Copper-transporting ATPase signature 420 434 5.4E-18 T 13-10-2018 COP00_11460 1732e8d47727b80e4a8944af89a5476c 811 PRINTS PR00943 Copper-transporting ATPase signature 675 692 5.4E-18 T 13-10-2018 COP00_11460 1732e8d47727b80e4a8944af89a5476c 811 PRINTS PR00943 Copper-transporting ATPase signature 215 234 5.4E-18 T 13-10-2018 COP00_11460 1732e8d47727b80e4a8944af89a5476c 811 PRINTS PR00943 Copper-transporting ATPase signature 732 746 5.4E-18 T 13-10-2018 COP00_11460 1732e8d47727b80e4a8944af89a5476c 811 PRINTS PR00943 Copper-transporting ATPase signature 482 497 5.4E-18 T 13-10-2018 COP00_11460 1732e8d47727b80e4a8944af89a5476c 811 PRINTS PR00943 Copper-transporting ATPase signature 267 286 5.4E-18 T 13-10-2018 COP00_11460 1732e8d47727b80e4a8944af89a5476c 811 PRINTS PR00943 Copper-transporting ATPase signature 118 138 5.4E-18 T 13-10-2018 COP00_11460 1732e8d47727b80e4a8944af89a5476c 811 PRINTS PR00943 Copper-transporting ATPase signature 287 305 5.4E-18 T 13-10-2018 COP00_11460 1732e8d47727b80e4a8944af89a5476c 811 Gene3D G3DSA:3.40.50.1000 480 749 8.6E-97 T 13-10-2018 IPR023214 HAD superfamily COP00_11460 1732e8d47727b80e4a8944af89a5476c 811 Gene3D G3DSA:3.30.70.100 1 71 3.4E-22 T 13-10-2018 COP00_11460 1732e8d47727b80e4a8944af89a5476c 811 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 347 361 7.0E-27 T 13-10-2018 COP00_11460 1732e8d47727b80e4a8944af89a5476c 811 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 721 733 7.0E-27 T 13-10-2018 COP00_11460 1732e8d47727b80e4a8944af89a5476c 811 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 499 513 7.0E-27 T 13-10-2018 COP00_11460 1732e8d47727b80e4a8944af89a5476c 811 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 645 655 7.0E-27 T 13-10-2018 COP00_11460 1732e8d47727b80e4a8944af89a5476c 811 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 698 717 7.0E-27 T 13-10-2018 COP00_11460 1732e8d47727b80e4a8944af89a5476c 811 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 623 634 7.0E-27 T 13-10-2018 COP00_11460 1732e8d47727b80e4a8944af89a5476c 811 ProSitePatterns PS01047 Heavy-metal-associated domain. 79 108 - T 13-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 COP00_11460 1732e8d47727b80e4a8944af89a5476c 811 SUPERFAMILY SSF55008 73 143 2.09E-21 T 13-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 COP00_11460 1732e8d47727b80e4a8944af89a5476c 811 SUPERFAMILY SSF55008 3 70 2.36E-20 T 13-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 COP00_11460 1732e8d47727b80e4a8944af89a5476c 811 SUPERFAMILY SSF56784 497 798 2.59E-61 T 13-10-2018 IPR036412 HAD-like superfamily COP00_11460 1732e8d47727b80e4a8944af89a5476c 811 Pfam PF00702 haloacid dehalogenase-like hydrolase 495 712 9.5E-48 T 13-10-2018 COP00_11460 1732e8d47727b80e4a8944af89a5476c 811 Gene3D G3DSA:3.40.1110.10 510 630 8.6E-97 T 13-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 COP00_11460 1732e8d47727b80e4a8944af89a5476c 811 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 501 507 - T 13-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 COP00_02910 7e1dd187d4bf6757b32d695eb1e37824 236 SUPERFAMILY SSF50685 166 222 1.6E-7 T 13-10-2018 IPR036908 RlpA-like domain superfamily COP00_02910 7e1dd187d4bf6757b32d695eb1e37824 236 Gene3D G3DSA:2.40.40.10 53 228 1.9E-5 T 13-10-2018 IPR036908 RlpA-like domain superfamily COP00_02910 7e1dd187d4bf6757b32d695eb1e37824 236 Pfam PF06725 3D domain 169 233 2.0E-13 T 13-10-2018 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 COP00_22985 16c9be0668cfd10613ee1e2cec36d9d4 336 Gene3D G3DSA:3.40.50.720 2 246 1.3E-72 T 13-10-2018 COP00_22985 16c9be0668cfd10613ee1e2cec36d9d4 336 Pfam PF00899 ThiF family 5 239 8.0E-57 T 13-10-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 COP00_22985 16c9be0668cfd10613ee1e2cec36d9d4 336 SUPERFAMILY SSF69572 3 327 1.23E-79 T 13-10-2018 IPR035985 Ubiquitin-activating enzyme GO:0008641 COP00_05810 3ea27c2a1c30392f4b57adcae962e08c 194 Gene3D G3DSA:3.30.70.1950 104 194 2.4E-32 T 13-10-2018 IPR038471 MecA, C-terminal domain superfamily COP00_05810 3ea27c2a1c30392f4b57adcae962e08c 194 PIRSF PIRSF029008 1 194 8.6E-63 T 13-10-2018 IPR008681 Negative regulator of genetic competence, MecA COP00_05810 3ea27c2a1c30392f4b57adcae962e08c 194 Pfam PF05389 Negative regulator of genetic competence (MecA) 104 189 1.8E-15 T 13-10-2018 IPR008681 Negative regulator of genetic competence, MecA COP00_05810 3ea27c2a1c30392f4b57adcae962e08c 194 Pfam PF05389 Negative regulator of genetic competence (MecA) 1 89 4.3E-26 T 13-10-2018 IPR008681 Negative regulator of genetic competence, MecA COP00_05810 3ea27c2a1c30392f4b57adcae962e08c 194 Hamap MF_01124 Adapter protein MecA [mecA]. 1 193 24.52 T 13-10-2018 IPR008681 Negative regulator of genetic competence, MecA COP00_00500 b82cd2d1ad54533adbf74d6f9ca89d4f 95 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 8 49 5.0E-10 T 13-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 COP00_00500 b82cd2d1ad54533adbf74d6f9ca89d4f 95 SMART SM00966 8 51 2.2E-7 T 13-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 COP00_00500 b82cd2d1ad54533adbf74d6f9ca89d4f 95 SUPERFAMILY SSF89447 2 52 1.29E-14 T 13-10-2018 IPR037914 SpoVT-AbrB domain superfamily COP00_00500 b82cd2d1ad54533adbf74d6f9ca89d4f 95 Gene3D G3DSA:2.10.260.10 1 51 4.7E-21 T 13-10-2018 COP00_23815 afb52d06e9584f56567697027df02b93 664 SUPERFAMILY SSF51445 5 357 9.67E-91 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily COP00_23815 afb52d06e9584f56567697027df02b93 664 Pfam PF08533 Beta-galactosidase C-terminal domain 603 659 3.5E-7 T 13-10-2018 IPR013739 Beta-galactosidase C-terminal GO:0004565|GO:0006012 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 COP00_23815 afb52d06e9584f56567697027df02b93 664 PIRSF PIRSF001084 1 661 1.5E-194 T 13-10-2018 IPR003476 Glycoside hydrolase, family 42 GO:0004565|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 COP00_23815 afb52d06e9584f56567697027df02b93 664 Pfam PF08532 Beta-galactosidase trimerisation domain 389 594 7.6E-44 T 13-10-2018 IPR013738 Beta-galactosidase trimerisation GO:0004565|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 COP00_23815 afb52d06e9584f56567697027df02b93 664 Gene3D G3DSA:3.40.50.880 387 598 4.1E-34 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like COP00_23815 afb52d06e9584f56567697027df02b93 664 Gene3D G3DSA:3.20.20.80 1 382 2.0E-106 T 13-10-2018 COP00_23815 afb52d06e9584f56567697027df02b93 664 SUPERFAMILY SSF52317 386 594 1.72E-32 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like COP00_23815 afb52d06e9584f56567697027df02b93 664 Pfam PF02449 Beta-galactosidase 11 376 3.8E-120 T 13-10-2018 IPR013529 Glycoside hydrolase, family 42, N-terminal GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 COP00_07930 05a6f85fafa9631b7916ec9a8ad805e4 137 Pfam PF02627 Carboxymuconolactone decarboxylase family 36 112 5.2E-13 T 13-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 COP00_07930 05a6f85fafa9631b7916ec9a8ad805e4 137 SUPERFAMILY SSF69118 4 129 1.55E-26 T 13-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 COP00_07930 05a6f85fafa9631b7916ec9a8ad805e4 137 Gene3D G3DSA:1.20.1290.10 5 130 1.4E-33 T 13-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 COP00_19520 41a456026e55ab480a04886ed0f50c49 94 ProSitePatterns PS00681 Chaperonins cpn10 signature. 2 26 - T 13-10-2018 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 COP00_19520 41a456026e55ab480a04886ed0f50c49 94 Hamap MF_00580 10 kDa chaperonin [groS]. 1 94 27.141 T 13-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 COP00_19520 41a456026e55ab480a04886ed0f50c49 94 Pfam PF00166 Chaperonin 10 Kd subunit 2 93 2.9E-36 T 13-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 COP00_19520 41a456026e55ab480a04886ed0f50c49 94 SMART SM00883 1 93 5.2E-56 T 13-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 COP00_19520 41a456026e55ab480a04886ed0f50c49 94 SUPERFAMILY SSF50129 2 93 2.2E-35 T 13-10-2018 IPR011032 GroES-like superfamily COP00_19520 41a456026e55ab480a04886ed0f50c49 94 PRINTS PR00297 10kDa chaperonin signature 59 71 3.0E-33 T 13-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 COP00_19520 41a456026e55ab480a04886ed0f50c49 94 PRINTS PR00297 10kDa chaperonin signature 24 45 3.0E-33 T 13-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 COP00_19520 41a456026e55ab480a04886ed0f50c49 94 PRINTS PR00297 10kDa chaperonin signature 2 17 3.0E-33 T 13-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 COP00_19520 41a456026e55ab480a04886ed0f50c49 94 PRINTS PR00297 10kDa chaperonin signature 80 93 3.0E-33 T 13-10-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 COP00_19520 41a456026e55ab480a04886ed0f50c49 94 Gene3D G3DSA:2.30.33.40 1 94 1.3E-38 T 13-10-2018 IPR037124 GroES chaperonin superfamily GO:0005737|GO:0006457 COP00_21740 0526a170492f6b090c0b23f196409fab 143 SUPERFAMILY SSF46785 2 134 3.8E-38 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_21740 0526a170492f6b090c0b23f196409fab 143 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 13-10-2018 IPR030489 Transcription regulator Rrf2-type, conserved site COP00_21740 0526a170492f6b090c0b23f196409fab 143 Gene3D G3DSA:1.10.10.10 1 141 2.4E-39 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_21740 0526a170492f6b090c0b23f196409fab 143 Pfam PF02082 Transcriptional regulator 1 82 7.3E-25 T 13-10-2018 IPR000944 Transcription regulator Rrf2-type COP00_21740 0526a170492f6b090c0b23f196409fab 143 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 132 9.5E-42 T 13-10-2018 IPR000944 Transcription regulator Rrf2-type COP00_20905 8aa5c4ad82ec10e2932e845a8a192a90 319 Gene3D G3DSA:1.20.58.340 125 237 8.3E-27 T 13-10-2018 COP00_20905 8aa5c4ad82ec10e2932e845a8a192a90 319 Pfam PF01544 CorA-like Mg2+ transporter protein 28 310 3.3E-76 T 13-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 COP00_20905 8aa5c4ad82ec10e2932e845a8a192a90 319 Gene3D G3DSA:1.20.58.340 239 315 4.0E-33 T 13-10-2018 COP00_20905 8aa5c4ad82ec10e2932e845a8a192a90 319 SUPERFAMILY SSF143865 25 249 1.83E-59 T 13-10-2018 COP00_20905 8aa5c4ad82ec10e2932e845a8a192a90 319 TIGRFAM TIGR00383 corA: magnesium and cobalt transport protein CorA 19 315 5.9E-104 T 13-10-2018 IPR004488 Magnesium/cobalt transport protein CorA GO:0006824|GO:0015087|GO:0015095|GO:0015693|GO:0016020 COP00_20905 8aa5c4ad82ec10e2932e845a8a192a90 319 SUPERFAMILY SSF144083 250 312 9.94E-23 T 13-10-2018 COP00_20905 8aa5c4ad82ec10e2932e845a8a192a90 319 Gene3D G3DSA:3.30.460.20 9 124 2.1E-31 T 13-10-2018 COP00_05800 426a3d492aaec076a889104345cce880 322 Gene3D G3DSA:3.50.50.60 6 295 6.5E-54 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily COP00_05800 426a3d492aaec076a889104345cce880 322 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 243 259 1.5E-12 T 13-10-2018 COP00_05800 426a3d492aaec076a889104345cce880 322 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 1.5E-12 T 13-10-2018 COP00_05800 426a3d492aaec076a889104345cce880 322 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 159 177 1.5E-12 T 13-10-2018 COP00_05800 426a3d492aaec076a889104345cce880 322 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 272 294 1.5E-12 T 13-10-2018 COP00_05800 426a3d492aaec076a889104345cce880 322 TIGRFAM TIGR04018 Bthiol_YpdA: putative bacillithiol system oxidoreductase, YpdA family 6 320 1.9E-141 T 13-10-2018 IPR023856 Bacillithiol biosynthesis thiol disulphide oxidoreductase, YpdA COP00_05800 426a3d492aaec076a889104345cce880 322 Pfam PF13738 Pyridine nucleotide-disulphide oxidoreductase 7 291 1.8E-105 T 13-10-2018 COP00_05800 426a3d492aaec076a889104345cce880 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 155 179 2.0E-18 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 COP00_05800 426a3d492aaec076a889104345cce880 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 120 128 2.0E-18 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 COP00_05800 426a3d492aaec076a889104345cce880 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 5 27 2.0E-18 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 COP00_05800 426a3d492aaec076a889104345cce880 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 212 228 2.0E-18 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 COP00_05800 426a3d492aaec076a889104345cce880 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 282 300 2.0E-18 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 COP00_05800 426a3d492aaec076a889104345cce880 322 Gene3D G3DSA:3.50.50.60 132 250 6.5E-54 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily COP00_05800 426a3d492aaec076a889104345cce880 322 SUPERFAMILY SSF51905 5 321 1.08E-38 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily COP00_09115 e29629b9e67f121c6c55018a567cb88c 585 Gene3D G3DSA:3.40.1380.20 340 472 1.4E-41 T 13-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 COP00_09115 e29629b9e67f121c6c55018a567cb88c 585 SUPERFAMILY SSF51621 1 344 1.71E-105 T 13-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 COP00_09115 e29629b9e67f121c6c55018a567cb88c 585 Pfam PF00391 PEP-utilising enzyme, mobile domain 504 575 6.7E-22 T 13-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 COP00_09115 e29629b9e67f121c6c55018a567cb88c 585 Pfam PF02887 Pyruvate kinase, alpha/beta domain 358 469 2.4E-32 T 13-10-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 COP00_09115 e29629b9e67f121c6c55018a567cb88c 585 Gene3D G3DSA:3.20.20.60 4 332 2.5E-151 T 13-10-2018 COP00_09115 e29629b9e67f121c6c55018a567cb88c 585 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 2 471 1.3E-192 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 COP00_09115 e29629b9e67f121c6c55018a567cb88c 585 Gene3D G3DSA:3.50.30.10 474 585 1.5E-35 T 13-10-2018 COP00_09115 e29629b9e67f121c6c55018a567cb88c 585 SUPERFAMILY SSF52935 323 473 1.96E-39 T 13-10-2018 IPR036918 Pyruvate kinase, C-terminal domain superfamily KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 COP00_09115 e29629b9e67f121c6c55018a567cb88c 585 SUPERFAMILY SSF52009 465 582 2.49E-30 T 13-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 COP00_09115 e29629b9e67f121c6c55018a567cb88c 585 ProSitePatterns PS00110 Pyruvate kinase active site signature. 215 227 - T 13-10-2018 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 COP00_09115 e29629b9e67f121c6c55018a567cb88c 585 Gene3D G3DSA:2.40.33.10 71 167 2.5E-151 T 13-10-2018 IPR015806 Pyruvate kinase, insert domain superfamily GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 COP00_09115 e29629b9e67f121c6c55018a567cb88c 585 Pfam PF00224 Pyruvate kinase, barrel domain 1 344 3.6E-159 T 13-10-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 COP00_09115 e29629b9e67f121c6c55018a567cb88c 585 SUPERFAMILY SSF50800 70 167 4.54E-27 T 13-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily COP00_09115 e29629b9e67f121c6c55018a567cb88c 585 PRINTS PR01050 Pyruvate kinase family signature 217 243 1.7E-80 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 COP00_09115 e29629b9e67f121c6c55018a567cb88c 585 PRINTS PR01050 Pyruvate kinase family signature 294 312 1.7E-80 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 COP00_09115 e29629b9e67f121c6c55018a567cb88c 585 PRINTS PR01050 Pyruvate kinase family signature 313 329 1.7E-80 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 COP00_09115 e29629b9e67f121c6c55018a567cb88c 585 PRINTS PR01050 Pyruvate kinase family signature 244 268 1.7E-80 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 COP00_09115 e29629b9e67f121c6c55018a567cb88c 585 PRINTS PR01050 Pyruvate kinase family signature 269 293 1.7E-80 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 COP00_09115 e29629b9e67f121c6c55018a567cb88c 585 PRINTS PR01050 Pyruvate kinase family signature 59 75 1.7E-80 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 COP00_09115 e29629b9e67f121c6c55018a567cb88c 585 PRINTS PR01050 Pyruvate kinase family signature 186 200 1.7E-80 T 13-10-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 COP00_07195 2ffa06c2b73e04ac7031178d595684cd 212 SUPERFAMILY SSF46785 5 81 2.1E-14 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_07195 2ffa06c2b73e04ac7031178d595684cd 212 Gene3D G3DSA:3.10.580.10 64 212 4.8E-62 T 13-10-2018 COP00_07195 2ffa06c2b73e04ac7031178d595684cd 212 SMART SM00116 86 134 0.0026 T 13-10-2018 IPR000644 CBS domain COP00_07195 2ffa06c2b73e04ac7031178d595684cd 212 SMART SM00116 153 204 0.0036 T 13-10-2018 IPR000644 CBS domain COP00_07195 2ffa06c2b73e04ac7031178d595684cd 212 Pfam PF08279 HTH domain 9 61 1.1E-12 T 13-10-2018 IPR013196 Helix-turn-helix, type 11 COP00_07195 2ffa06c2b73e04ac7031178d595684cd 212 Gene3D G3DSA:1.10.10.10 1 63 1.1E-8 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_07195 2ffa06c2b73e04ac7031178d595684cd 212 SUPERFAMILY SSF54631 69 205 2.02E-23 T 13-10-2018 COP00_07195 2ffa06c2b73e04ac7031178d595684cd 212 Pfam PF00571 CBS domain 147 203 1.1E-5 T 13-10-2018 IPR000644 CBS domain COP00_07195 2ffa06c2b73e04ac7031178d595684cd 212 Pfam PF00571 CBS domain 80 133 1.2E-7 T 13-10-2018 IPR000644 CBS domain COP00_07195 2ffa06c2b73e04ac7031178d595684cd 212 PIRSF PIRSF026546 4 210 3.9E-103 T 13-10-2018 IPR016842 Protein of unknown function UCP026546, HtH-CBS COP00_15915 e6fb9680e2e868a3f88c53ae3cb551f8 208 Gene3D G3DSA:3.30.300.20 59 140 1.3E-24 T 13-10-2018 IPR015946 K homology domain-like, alpha/beta COP00_15915 e6fb9680e2e868a3f88c53ae3cb551f8 208 Gene3D G3DSA:3.30.30.80 1 57 1.7E-19 T 13-10-2018 IPR038247 Jag, N-terminal domain superfamily COP00_15915 e6fb9680e2e868a3f88c53ae3cb551f8 208 Gene3D G3DSA:3.30.1370.50 141 208 2.6E-23 T 13-10-2018 IPR036867 R3H domain superfamily GO:0003676 COP00_15915 e6fb9680e2e868a3f88c53ae3cb551f8 208 Pfam PF13083 KH domain 64 128 1.6E-13 T 13-10-2018 COP00_15915 e6fb9680e2e868a3f88c53ae3cb551f8 208 Pfam PF14804 Jag N-terminus 6 55 5.9E-20 T 13-10-2018 IPR032782 Jag, N-terminal COP00_15915 e6fb9680e2e868a3f88c53ae3cb551f8 208 SUPERFAMILY SSF82708 156 205 3.14E-7 T 13-10-2018 IPR036867 R3H domain superfamily GO:0003676 COP00_15915 e6fb9680e2e868a3f88c53ae3cb551f8 208 SMART SM00393 126 206 2.2E-18 T 13-10-2018 IPR001374 R3H domain GO:0003676 COP00_15915 e6fb9680e2e868a3f88c53ae3cb551f8 208 SMART SM01245 5 57 1.3E-21 T 13-10-2018 IPR032782 Jag, N-terminal COP00_15915 e6fb9680e2e868a3f88c53ae3cb551f8 208 Pfam PF01424 R3H domain 144 204 1.3E-14 T 13-10-2018 IPR001374 R3H domain GO:0003676 COP00_24040 ac6ecacd25b8b7ec12138295e9ad301c 287 Hamap MF_01875 Non-homologous end joining protein Ku [ku]. 1 255 31.456 T 13-10-2018 IPR009187 Non-homologous end joining protein Ku, prokaryotic type COP00_24040 ac6ecacd25b8b7ec12138295e9ad301c 287 TIGRFAM TIGR02772 Ku_bact: Ku protein 1 257 3.2E-92 T 13-10-2018 IPR009187 Non-homologous end joining protein Ku, prokaryotic type COP00_24040 ac6ecacd25b8b7ec12138295e9ad301c 287 PIRSF PIRSF006493 1 287 4.5E-104 T 13-10-2018 IPR009187 Non-homologous end joining protein Ku, prokaryotic type COP00_24040 ac6ecacd25b8b7ec12138295e9ad301c 287 Pfam PF02735 Ku70/Ku80 beta-barrel domain 11 187 1.4E-40 T 13-10-2018 IPR006164 Ku70/Ku80 beta-barrel domain GO:0003677|GO:0006303 Reactome: R-HSA-164843|Reactome: R-HSA-1834949|Reactome: R-HSA-3270619|Reactome: R-HSA-5693571|Reactome: R-HSA-6798695 COP00_24040 ac6ecacd25b8b7ec12138295e9ad301c 287 SUPERFAMILY SSF100939 2 262 1.45E-55 T 13-10-2018 IPR016194 SPOC-like, C-terminal domain superfamily COP00_24040 ac6ecacd25b8b7ec12138295e9ad301c 287 SMART SM00559 52 181 5.1E-49 T 13-10-2018 IPR006164 Ku70/Ku80 beta-barrel domain GO:0003677|GO:0006303 Reactome: R-HSA-164843|Reactome: R-HSA-1834949|Reactome: R-HSA-3270619|Reactome: R-HSA-5693571|Reactome: R-HSA-6798695 COP00_24040 ac6ecacd25b8b7ec12138295e9ad301c 287 Gene3D G3DSA:2.40.290.10 2 175 1.3E-20 T 13-10-2018 IPR016194 SPOC-like, C-terminal domain superfamily COP00_04785 e28612d00b36d246cc3fffd3a25ca2bb 166 Pfam PF05163 DinB family 3 163 6.2E-33 T 13-10-2018 IPR007837 DNA damage-inducible protein DinB COP00_04785 e28612d00b36d246cc3fffd3a25ca2bb 166 SUPERFAMILY SSF109854 8 163 1.47E-30 T 13-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes COP00_04785 e28612d00b36d246cc3fffd3a25ca2bb 166 Gene3D G3DSA:1.20.120.450 1 165 2.9E-41 T 13-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes COP00_22705 62258f8973d29c02d7d388b61fab2166 255 Gene3D G3DSA:3.40.50.1820 1 255 4.0E-55 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold COP00_22705 62258f8973d29c02d7d388b61fab2166 255 Pfam PF00326 Prolyl oligopeptidase family 96 254 5.6E-13 T 13-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 COP00_22705 62258f8973d29c02d7d388b61fab2166 255 SUPERFAMILY SSF53474 21 255 6.51E-35 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold COP00_00565 7a0af80bfe4a50a511a0726a103aff24 470 SUPERFAMILY SSF55424 346 467 3.95E-41 T 13-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 COP00_00565 7a0af80bfe4a50a511a0726a103aff24 470 SUPERFAMILY SSF51905 7 339 6.94E-67 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily COP00_00565 7a0af80bfe4a50a511a0726a103aff24 470 Gene3D G3DSA:3.30.390.30 348 468 7.3E-44 T 13-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 COP00_00565 7a0af80bfe4a50a511a0726a103aff24 470 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 140 158 2.9E-43 T 13-10-2018 COP00_00565 7a0af80bfe4a50a511a0726a103aff24 470 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 178 196 2.9E-43 T 13-10-2018 COP00_00565 7a0af80bfe4a50a511a0726a103aff24 470 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 12 31 2.9E-43 T 13-10-2018 COP00_00565 7a0af80bfe4a50a511a0726a103aff24 470 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 266 282 2.9E-43 T 13-10-2018 COP00_00565 7a0af80bfe4a50a511a0726a103aff24 470 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 295 317 2.9E-43 T 13-10-2018 COP00_00565 7a0af80bfe4a50a511a0726a103aff24 470 Gene3D G3DSA:3.50.50.60 13 335 1.9E-129 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily COP00_00565 7a0af80bfe4a50a511a0726a103aff24 470 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 11 330 2.1E-75 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 COP00_00565 7a0af80bfe4a50a511a0726a103aff24 470 PIRSF PIRSF000350 3 458 1.2E-99 T 13-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 COP00_00565 7a0af80bfe4a50a511a0726a103aff24 470 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 44 54 - T 13-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 COP00_00565 7a0af80bfe4a50a511a0726a103aff24 470 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 349 457 3.7E-38 T 13-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 COP00_00565 7a0af80bfe4a50a511a0726a103aff24 470 Gene3D G3DSA:3.50.50.60 152 273 1.9E-129 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily COP00_00565 7a0af80bfe4a50a511a0726a103aff24 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 178 203 4.5E-76 T 13-10-2018 COP00_00565 7a0af80bfe4a50a511a0726a103aff24 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 410 425 4.5E-76 T 13-10-2018 COP00_00565 7a0af80bfe4a50a511a0726a103aff24 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 267 281 4.5E-76 T 13-10-2018 COP00_00565 7a0af80bfe4a50a511a0726a103aff24 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 432 452 4.5E-76 T 13-10-2018 COP00_00565 7a0af80bfe4a50a511a0726a103aff24 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 11 33 4.5E-76 T 13-10-2018 COP00_00565 7a0af80bfe4a50a511a0726a103aff24 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 143 152 4.5E-76 T 13-10-2018 COP00_00565 7a0af80bfe4a50a511a0726a103aff24 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 345 366 4.5E-76 T 13-10-2018 COP00_00565 7a0af80bfe4a50a511a0726a103aff24 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 43 58 4.5E-76 T 13-10-2018 COP00_00565 7a0af80bfe4a50a511a0726a103aff24 470 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 310 317 4.5E-76 T 13-10-2018 COP00_00565 7a0af80bfe4a50a511a0726a103aff24 470 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 10 468 3.3E-181 T 13-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 COP00_13685 c045ad079ed963548f4d22b041db2f63 543 Gene3D G3DSA:3.40.50.980 22 178 2.5E-54 T 13-10-2018 COP00_13685 c045ad079ed963548f4d22b041db2f63 543 Gene3D G3DSA:3.30.300.310 433 538 8.5E-33 T 13-10-2018 COP00_13685 c045ad079ed963548f4d22b041db2f63 543 TIGRFAM TIGR02275 DHB_AMP_lig: (2,3-dihydroxybenzoyl)adenylate synthase 7 528 3.6E-247 T 13-10-2018 IPR011963 2,3-dihydroxybenzoate-AMP ligase GO:0008668|GO:0019290 COP00_13685 c045ad079ed963548f4d22b041db2f63 543 SUPERFAMILY SSF56801 7 533 1.44E-145 T 13-10-2018 COP00_13685 c045ad079ed963548f4d22b041db2f63 543 Gene3D G3DSA:3.40.50.980 182 355 1.3E-60 T 13-10-2018 COP00_13685 c045ad079ed963548f4d22b041db2f63 543 Gene3D G3DSA:2.30.38.10 356 431 6.8E-33 T 13-10-2018 COP00_13685 c045ad079ed963548f4d22b041db2f63 543 ProSitePatterns PS00455 Putative AMP-binding domain signature. 189 200 - T 13-10-2018 IPR020845 AMP-binding, conserved site COP00_13685 c045ad079ed963548f4d22b041db2f63 543 Pfam PF13193 AMP-binding enzyme C-terminal domain 446 521 1.8E-16 T 13-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain COP00_13685 c045ad079ed963548f4d22b041db2f63 543 Pfam PF00501 AMP-binding enzyme 32 437 6.9E-88 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 COP00_09320 977fcac17dced751474a9dcf8685f912 142 Pfam PF05656 Protein of unknown function (DUF805) 11 137 7.6E-34 T 13-10-2018 IPR008523 Protein of unknown function DUF805 GO:0016021 COP00_06420 b6975a31400086622d4566a20d85b2fd 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 1.1E-12 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_06420 b6975a31400086622d4566a20d85b2fd 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 1.1E-12 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_06420 b6975a31400086622d4566a20d85b2fd 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 1.1E-12 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_06420 b6975a31400086622d4566a20d85b2fd 261 SUPERFAMILY SSF51735 7 251 6.33E-87 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily COP00_06420 b6975a31400086622d4566a20d85b2fd 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 6.4E-42 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_06420 b6975a31400086622d4566a20d85b2fd 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 6.4E-42 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_06420 b6975a31400086622d4566a20d85b2fd 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 6.4E-42 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_06420 b6975a31400086622d4566a20d85b2fd 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 6.4E-42 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_06420 b6975a31400086622d4566a20d85b2fd 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 6.4E-42 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_06420 b6975a31400086622d4566a20d85b2fd 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 6.4E-42 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_06420 b6975a31400086622d4566a20d85b2fd 261 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 251 6.2E-71 T 13-10-2018 COP00_06420 b6975a31400086622d4566a20d85b2fd 261 Gene3D G3DSA:3.40.50.720 1 261 7.6E-89 T 13-10-2018 COP00_06420 b6975a31400086622d4566a20d85b2fd 261 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 COP00_01610 d874d4715b269614b4e98d48b3450637 705 SUPERFAMILY SSF54211 7 144 6.58E-50 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold COP00_01610 d874d4715b269614b4e98d48b3450637 705 Pfam PF03725 3' exoribonuclease family, domain 2 460 530 1.8E-7 T 13-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 COP00_01610 d874d4715b269614b4e98d48b3450637 705 Pfam PF03725 3' exoribonuclease family, domain 2 147 210 3.5E-17 T 13-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 COP00_01610 d874d4715b269614b4e98d48b3450637 705 SUPERFAMILY SSF55666 145 236 6.02E-31 T 13-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 COP00_01610 d874d4715b269614b4e98d48b3450637 705 SUPERFAMILY SSF54791 556 641 8.34E-24 T 13-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 COP00_01610 d874d4715b269614b4e98d48b3450637 705 Pfam PF00575 S1 RNA binding domain 620 691 3.1E-19 T 13-10-2018 IPR003029 S1 domain GO:0003676 COP00_01610 d874d4715b269614b4e98d48b3450637 705 Gene3D G3DSA:2.40.50.140 623 694 4.5E-26 T 13-10-2018 COP00_01610 d874d4715b269614b4e98d48b3450637 705 SMART SM00316 621 691 9.2E-25 T 13-10-2018 IPR022967 RNA-binding domain, S1 COP00_01610 d874d4715b269614b4e98d48b3450637 705 SUPERFAMILY SSF54211 292 489 2.89E-49 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold COP00_01610 d874d4715b269614b4e98d48b3450637 705 SUPERFAMILY SSF55666 451 550 4.97E-29 T 13-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 COP00_01610 d874d4715b269614b4e98d48b3450637 705 Pfam PF00013 KH domain 557 614 7.7E-10 T 13-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 COP00_01610 d874d4715b269614b4e98d48b3450637 705 SUPERFAMILY SSF50249 621 704 3.0E-21 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold COP00_01610 d874d4715b269614b4e98d48b3450637 705 PIRSF PIRSF005499 2 705 0.0 T 13-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 COP00_01610 d874d4715b269614b4e98d48b3450637 705 Gene3D G3DSA:3.30.230.70 235 550 1.7E-122 T 13-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 COP00_01610 d874d4715b269614b4e98d48b3450637 705 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 12 693 0.0 T 13-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 COP00_01610 d874d4715b269614b4e98d48b3450637 705 SMART SM00322 553 618 2.9E-13 T 13-10-2018 IPR004087 K Homology domain GO:0003676 COP00_01610 d874d4715b269614b4e98d48b3450637 705 Pfam PF01138 3' exoribonuclease family, domain 1 15 144 4.4E-21 T 13-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 COP00_01610 d874d4715b269614b4e98d48b3450637 705 Pfam PF01138 3' exoribonuclease family, domain 1 324 457 8.8E-18 T 13-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 COP00_01610 d874d4715b269614b4e98d48b3450637 705 Gene3D G3DSA:3.30.230.70 1 230 1.9E-85 T 13-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 COP00_01610 d874d4715b269614b4e98d48b3450637 705 Gene3D G3DSA:3.30.1370.10 551 622 2.5E-21 T 13-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 COP00_01610 d874d4715b269614b4e98d48b3450637 705 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 4 694 31.408 T 13-10-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 COP00_01610 d874d4715b269614b4e98d48b3450637 705 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 242 320 5.1E-20 T 13-10-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 COP00_15305 e82b06139d1a0148374bff9495b2954a 251 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 37 55 3.4E-8 T 13-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 COP00_15305 e82b06139d1a0148374bff9495b2954a 251 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 23 37 3.4E-8 T 13-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 COP00_15305 e82b06139d1a0148374bff9495b2954a 251 SUPERFAMILY SSF46785 6 65 8.18E-13 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_15305 e82b06139d1a0148374bff9495b2954a 251 SMART SM00420 5 57 2.2E-21 T 13-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 COP00_15305 e82b06139d1a0148374bff9495b2954a 251 Pfam PF00455 DeoR C terminal sensor domain 73 230 1.4E-49 T 13-10-2018 IPR014036 DeoR C-terminal sensor domain COP00_15305 e82b06139d1a0148374bff9495b2954a 251 SUPERFAMILY SSF100950 72 232 2.72E-31 T 13-10-2018 IPR037171 NagB/RpiA transferase-like COP00_15305 e82b06139d1a0148374bff9495b2954a 251 Gene3D G3DSA:1.10.10.10 2 54 1.5E-6 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_15305 e82b06139d1a0148374bff9495b2954a 251 SMART SM01134 71 232 7.0E-60 T 13-10-2018 COP00_15305 e82b06139d1a0148374bff9495b2954a 251 Pfam PF08220 DeoR-like helix-turn-helix domain 5 61 3.4E-21 T 13-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 COP00_15305 e82b06139d1a0148374bff9495b2954a 251 ProSitePatterns PS00894 DeoR-type HTH domain signature. 5 39 - T 13-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 COP00_13890 27a36eea8a15ac59cee8c767976c8d10 394 SUPERFAMILY SSF103473 2 387 2.09E-34 T 13-10-2018 IPR036259 MFS transporter superfamily COP00_13890 27a36eea8a15ac59cee8c767976c8d10 394 Pfam PF07690 Major Facilitator Superfamily 12 343 1.4E-23 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 COP00_13890 27a36eea8a15ac59cee8c767976c8d10 394 Gene3D G3DSA:1.20.1250.20 200 384 5.8E-21 T 13-10-2018 COP00_13890 27a36eea8a15ac59cee8c767976c8d10 394 Gene3D G3DSA:1.20.1250.20 3 187 3.8E-19 T 13-10-2018 COP00_12490 5a880d5309b48828bece8b358a65317e 142 Gene3D G3DSA:1.10.10.10 52 124 7.6E-8 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_12490 5a880d5309b48828bece8b358a65317e 142 Pfam PF04545 Sigma-70, region 4 74 118 4.0E-9 T 13-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 COP00_12490 5a880d5309b48828bece8b358a65317e 142 SUPERFAMILY SSF88659 74 122 2.24E-9 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like COP00_15075 eb0b8151a89bd540c0cff6baee581963 277 SUPERFAMILY SSF63520 170 273 9.42E-31 T 13-10-2018 IPR036634 PRD domain superfamily GO:0006355 COP00_15075 eb0b8151a89bd540c0cff6baee581963 277 Gene3D G3DSA:1.10.1790.10 64 167 4.0E-41 T 13-10-2018 COP00_15075 eb0b8151a89bd540c0cff6baee581963 277 ProSitePatterns PS00654 PRD domain signature. 98 110 - T 13-10-2018 IPR001550 Transcription antiterminator, conserved site GO:0003723|GO:0045893 COP00_15075 eb0b8151a89bd540c0cff6baee581963 277 Gene3D G3DSA:2.30.24.10 1 55 7.7E-25 T 13-10-2018 IPR036650 CAT RNA-binding domain superfamily GO:0003723 COP00_15075 eb0b8151a89bd540c0cff6baee581963 277 SMART SM01061 1 59 4.8E-29 T 13-10-2018 IPR004341 CAT RNA-binding domain GO:0003723 COP00_15075 eb0b8151a89bd540c0cff6baee581963 277 Pfam PF00874 PRD domain 180 272 5.1E-23 T 13-10-2018 IPR011608 PRD domain GO:0006355 COP00_15075 eb0b8151a89bd540c0cff6baee581963 277 Pfam PF00874 PRD domain 75 163 3.4E-26 T 13-10-2018 IPR011608 PRD domain GO:0006355 COP00_15075 eb0b8151a89bd540c0cff6baee581963 277 SUPERFAMILY SSF63520 58 166 5.89E-33 T 13-10-2018 IPR036634 PRD domain superfamily GO:0006355 COP00_15075 eb0b8151a89bd540c0cff6baee581963 277 Gene3D G3DSA:1.10.1790.10 168 277 1.8E-44 T 13-10-2018 COP00_15075 eb0b8151a89bd540c0cff6baee581963 277 SUPERFAMILY SSF50151 2 54 4.58E-18 T 13-10-2018 IPR036650 CAT RNA-binding domain superfamily GO:0003723 COP00_15075 eb0b8151a89bd540c0cff6baee581963 277 Pfam PF03123 CAT RNA binding domain 2 56 7.6E-24 T 13-10-2018 IPR004341 CAT RNA-binding domain GO:0003723 COP00_15425 d7e0e1ecaee90feb71cebaac69302fcf 685 Pfam PF02449 Beta-galactosidase 17 397 2.5E-151 T 13-10-2018 IPR013529 Glycoside hydrolase, family 42, N-terminal GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 COP00_15425 d7e0e1ecaee90feb71cebaac69302fcf 685 Gene3D G3DSA:2.60.40.1180 622 683 2.2E-24 T 13-10-2018 IPR013780 Glycosyl hydrolase, all-beta COP00_15425 d7e0e1ecaee90feb71cebaac69302fcf 685 Pfam PF08533 Beta-galactosidase C-terminal domain 624 679 2.7E-15 T 13-10-2018 IPR013739 Beta-galactosidase C-terminal GO:0004565|GO:0006012 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 COP00_15425 d7e0e1ecaee90feb71cebaac69302fcf 685 SUPERFAMILY SSF52317 406 613 9.0E-57 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like COP00_15425 d7e0e1ecaee90feb71cebaac69302fcf 685 Gene3D G3DSA:3.40.50.880 405 621 2.5E-67 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like COP00_15425 d7e0e1ecaee90feb71cebaac69302fcf 685 SUPERFAMILY SSF51445 10 378 9.31E-111 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily COP00_15425 d7e0e1ecaee90feb71cebaac69302fcf 685 Gene3D G3DSA:3.20.20.80 1 404 1.1E-144 T 13-10-2018 COP00_15425 d7e0e1ecaee90feb71cebaac69302fcf 685 Pfam PF08532 Beta-galactosidase trimerisation domain 408 613 4.8E-73 T 13-10-2018 IPR013738 Beta-galactosidase trimerisation GO:0004565|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 COP00_15425 d7e0e1ecaee90feb71cebaac69302fcf 685 PIRSF PIRSF001084 5 682 3.1E-238 T 13-10-2018 IPR003476 Glycoside hydrolase, family 42 GO:0004565|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 COP00_02260 15cf6c6db0fb2dea06118d662c251adb 363 SUPERFAMILY SSF55846 3 168 1.02E-38 T 13-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 COP00_02260 15cf6c6db0fb2dea06118d662c251adb 363 SMART SM00644 14 168 9.6E-32 T 13-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 COP00_02260 15cf6c6db0fb2dea06118d662c251adb 363 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 24 153 5.2E-23 T 13-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 COP00_02260 15cf6c6db0fb2dea06118d662c251adb 363 Gene3D G3DSA:2.30.30.40 298 361 1.9E-5 T 13-10-2018 COP00_02260 15cf6c6db0fb2dea06118d662c251adb 363 Gene3D G3DSA:3.40.80.10 9 186 9.5E-45 T 13-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 COP00_05490 5c48eda824268c6a16a892a018f2e4cf 430 Gene3D G3DSA:3.30.930.10 102 430 7.5E-120 T 13-10-2018 COP00_05490 5c48eda824268c6a16a892a018f2e4cf 430 SUPERFAMILY SSF50249 10 102 9.86E-25 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold COP00_05490 5c48eda824268c6a16a892a018f2e4cf 430 Hamap MF_00534 Asparagine--tRNA ligase [asnS]. 1 430 42.239 T 13-10-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 COP00_05490 5c48eda824268c6a16a892a018f2e4cf 430 Pfam PF01336 OB-fold nucleic acid binding domain 16 95 3.6E-15 T 13-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 COP00_05490 5c48eda824268c6a16a892a018f2e4cf 430 Pfam PF00152 tRNA synthetases class II (D, K and N) 111 424 3.4E-85 T 13-10-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 COP00_05490 5c48eda824268c6a16a892a018f2e4cf 430 Gene3D G3DSA:2.40.50.140 2 101 5.3E-24 T 13-10-2018 COP00_05490 5c48eda824268c6a16a892a018f2e4cf 430 SUPERFAMILY SSF55681 110 424 9.75E-99 T 13-10-2018 COP00_05490 5c48eda824268c6a16a892a018f2e4cf 430 TIGRFAM TIGR00457 asnS: asparagine--tRNA ligase 1 429 6.7E-173 T 13-10-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 COP00_05490 5c48eda824268c6a16a892a018f2e4cf 430 PRINTS PR01042 Aspartyl-tRNA synthetase signature 180 192 3.1E-15 T 13-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 COP00_05490 5c48eda824268c6a16a892a018f2e4cf 430 PRINTS PR01042 Aspartyl-tRNA synthetase signature 385 399 3.1E-15 T 13-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 COP00_05490 5c48eda824268c6a16a892a018f2e4cf 430 PRINTS PR01042 Aspartyl-tRNA synthetase signature 196 209 3.1E-15 T 13-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 COP00_05490 5c48eda824268c6a16a892a018f2e4cf 430 PRINTS PR01042 Aspartyl-tRNA synthetase signature 345 361 3.1E-15 T 13-10-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 COP00_06525 8ad022a17f2a5e7685f1ccb6064fde82 689 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 583 592 - T 13-10-2018 IPR025944 Sigma-54 interaction domain, conserved site COP00_06525 8ad022a17f2a5e7685f1ccb6064fde82 689 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 647 664 2.2E-7 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 COP00_06525 8ad022a17f2a5e7685f1ccb6064fde82 689 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 664 684 2.2E-7 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 COP00_06525 8ad022a17f2a5e7685f1ccb6064fde82 689 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 456 471 - T 13-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 COP00_06525 8ad022a17f2a5e7685f1ccb6064fde82 689 SUPERFAMILY SSF52540 368 615 3.51E-69 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_06525 8ad022a17f2a5e7685f1ccb6064fde82 689 Gene3D G3DSA:3.40.50.300 356 540 3.3E-65 T 13-10-2018 COP00_06525 8ad022a17f2a5e7685f1ccb6064fde82 689 Pfam PF00989 PAS fold 238 340 7.3E-14 T 13-10-2018 IPR013767 PAS fold GO:0006355 COP00_06525 8ad022a17f2a5e7685f1ccb6064fde82 689 Pfam PF00989 PAS fold 121 219 3.1E-13 T 13-10-2018 IPR013767 PAS fold GO:0006355 COP00_06525 8ad022a17f2a5e7685f1ccb6064fde82 689 Gene3D G3DSA:3.40.50.720 1 91 2.4E-6 T 13-10-2018 COP00_06525 8ad022a17f2a5e7685f1ccb6064fde82 689 SMART SM00091 118 184 1.0E-8 T 13-10-2018 IPR000014 PAS domain COP00_06525 8ad022a17f2a5e7685f1ccb6064fde82 689 SMART SM00091 237 302 8.3E-7 T 13-10-2018 IPR000014 PAS domain COP00_06525 8ad022a17f2a5e7685f1ccb6064fde82 689 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 393 406 - T 13-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 COP00_06525 8ad022a17f2a5e7685f1ccb6064fde82 689 SMART SM00382 389 533 4.9E-14 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_06525 8ad022a17f2a5e7685f1ccb6064fde82 689 Gene3D G3DSA:1.10.10.60 631 687 1.1E-16 T 13-10-2018 COP00_06525 8ad022a17f2a5e7685f1ccb6064fde82 689 SUPERFAMILY SSF55785 218 337 1.45E-15 T 13-10-2018 IPR035965 PAS domain superfamily COP00_06525 8ad022a17f2a5e7685f1ccb6064fde82 689 Pfam PF00158 Sigma-54 interaction domain 369 536 1.8E-67 T 13-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 COP00_06525 8ad022a17f2a5e7685f1ccb6064fde82 689 SUPERFAMILY SSF51735 1 103 4.73E-12 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily COP00_06525 8ad022a17f2a5e7685f1ccb6064fde82 689 SUPERFAMILY SSF55785 104 216 1.48E-16 T 13-10-2018 IPR035965 PAS domain superfamily COP00_06525 8ad022a17f2a5e7685f1ccb6064fde82 689 SUPERFAMILY SSF46689 583 683 4.03E-12 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 COP00_06525 8ad022a17f2a5e7685f1ccb6064fde82 689 Gene3D G3DSA:1.10.8.60 541 620 8.3E-23 T 13-10-2018 COP00_06525 8ad022a17f2a5e7685f1ccb6064fde82 689 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 234 350 4.2E-18 T 13-10-2018 IPR000014 PAS domain COP00_06525 8ad022a17f2a5e7685f1ccb6064fde82 689 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 116 228 3.8E-13 T 13-10-2018 IPR000014 PAS domain COP00_06525 8ad022a17f2a5e7685f1ccb6064fde82 689 Gene3D G3DSA:3.30.450.20 224 340 2.0E-16 T 13-10-2018 COP00_06525 8ad022a17f2a5e7685f1ccb6064fde82 689 Gene3D G3DSA:3.30.450.20 106 220 1.9E-21 T 13-10-2018 COP00_06525 8ad022a17f2a5e7685f1ccb6064fde82 689 Pfam PF02954 Bacterial regulatory protein, Fis family 641 681 2.5E-14 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 COP00_21210 5a26a9549c28edef17865eb295a733c6 532 Gene3D G3DSA:3.40.190.10 208 520 3.1E-176 T 13-10-2018 COP00_21210 5a26a9549c28edef17865eb295a733c6 532 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 89 111 - T 13-10-2018 IPR023765 Solute-binding protein family 5, conserved site COP00_21210 5a26a9549c28edef17865eb295a733c6 532 Gene3D G3DSA:3.10.105.10 290 507 3.1E-176 T 13-10-2018 COP00_21210 5a26a9549c28edef17865eb295a733c6 532 SUPERFAMILY SSF53850 38 531 2.34E-160 T 13-10-2018 COP00_21210 5a26a9549c28edef17865eb295a733c6 532 PIRSF PIRSF002741 1 532 3.6E-144 T 13-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 COP00_21210 5a26a9549c28edef17865eb295a733c6 532 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 83 452 2.5E-115 T 13-10-2018 IPR000914 Solute-binding protein family 5 domain COP00_21210 5a26a9549c28edef17865eb295a733c6 532 Gene3D G3DSA:3.90.76.10 55 207 3.1E-176 T 13-10-2018 COP00_12160 2ec1b9d6a211c502341e06ea2c153c8b 280 Pfam PF00535 Glycosyl transferase family 2 10 162 5.6E-35 T 13-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 COP00_12160 2ec1b9d6a211c502341e06ea2c153c8b 280 SUPERFAMILY SSF53448 7 229 8.44E-60 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases COP00_12160 2ec1b9d6a211c502341e06ea2c153c8b 280 Gene3D G3DSA:3.90.550.10 1 249 3.2E-62 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases COP00_05410 105e259d501a3ade4dbfae4bef8b4846 81 Pfam PF11122 Inner spore coat protein D 10 72 7.0E-18 T 13-10-2018 IPR020108 Spore coat protein CotD COP00_05410 105e259d501a3ade4dbfae4bef8b4846 81 ProDom PD057197 SPORE COAT CAPSID D INNER D COTD SPORULATION 2 64 6.0E-21 T 13-10-2018 IPR020108 Spore coat protein CotD COP00_08235 9008b4d48ec73f6c2fdf3ab4cbc875a9 523 Gene3D G3DSA:2.30.30.40 16 93 2.4E-15 T 13-10-2018 COP00_08235 9008b4d48ec73f6c2fdf3ab4cbc875a9 523 Gene3D G3DSA:2.30.30.40 253 321 2.3E-13 T 13-10-2018 COP00_08235 9008b4d48ec73f6c2fdf3ab4cbc875a9 523 PIRSF PIRSF037846 1 249 8.4E-76 T 13-10-2018 IPR017293 N-acetylmuramoyl-L-alanine amidase, YrvJ, predicted MetaCyc: PWY-7883 COP00_08235 9008b4d48ec73f6c2fdf3ab4cbc875a9 523 PIRSF PIRSF037846 231 523 6.0E-136 T 13-10-2018 IPR017293 N-acetylmuramoyl-L-alanine amidase, YrvJ, predicted MetaCyc: PWY-7883 COP00_08235 9008b4d48ec73f6c2fdf3ab4cbc875a9 523 Gene3D G3DSA:2.30.30.40 180 238 6.5E-19 T 13-10-2018 COP00_08235 9008b4d48ec73f6c2fdf3ab4cbc875a9 523 Gene3D G3DSA:2.30.30.40 104 168 3.1E-17 T 13-10-2018 COP00_08235 9008b4d48ec73f6c2fdf3ab4cbc875a9 523 SMART SM00646 410 519 7.1E-29 T 13-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 COP00_08235 9008b4d48ec73f6c2fdf3ab4cbc875a9 523 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 351 519 1.1E-45 T 13-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 COP00_08235 9008b4d48ec73f6c2fdf3ab4cbc875a9 523 SMART SM00287 258 320 7.5E-14 T 13-10-2018 IPR003646 SH3-like domain, bacterial-type COP00_08235 9008b4d48ec73f6c2fdf3ab4cbc875a9 523 SMART SM00287 180 242 4.0E-16 T 13-10-2018 IPR003646 SH3-like domain, bacterial-type COP00_08235 9008b4d48ec73f6c2fdf3ab4cbc875a9 523 SMART SM00287 106 168 1.4E-11 T 13-10-2018 IPR003646 SH3-like domain, bacterial-type COP00_08235 9008b4d48ec73f6c2fdf3ab4cbc875a9 523 SMART SM00287 30 92 6.1E-14 T 13-10-2018 IPR003646 SH3-like domain, bacterial-type COP00_08235 9008b4d48ec73f6c2fdf3ab4cbc875a9 523 Pfam PF08239 Bacterial SH3 domain 188 238 2.2E-14 T 13-10-2018 IPR003646 SH3-like domain, bacterial-type COP00_08235 9008b4d48ec73f6c2fdf3ab4cbc875a9 523 Pfam PF08239 Bacterial SH3 domain 267 317 1.6E-7 T 13-10-2018 IPR003646 SH3-like domain, bacterial-type COP00_08235 9008b4d48ec73f6c2fdf3ab4cbc875a9 523 Pfam PF08239 Bacterial SH3 domain 40 89 3.6E-10 T 13-10-2018 IPR003646 SH3-like domain, bacterial-type COP00_08235 9008b4d48ec73f6c2fdf3ab4cbc875a9 523 Pfam PF08239 Bacterial SH3 domain 115 165 2.9E-13 T 13-10-2018 IPR003646 SH3-like domain, bacterial-type COP00_08235 9008b4d48ec73f6c2fdf3ab4cbc875a9 523 Gene3D G3DSA:3.40.630.40 338 523 3.2E-53 T 13-10-2018 COP00_08235 9008b4d48ec73f6c2fdf3ab4cbc875a9 523 SUPERFAMILY SSF53187 348 522 4.39E-52 T 13-10-2018 COP00_21020 d4a5664ecbf5bf2683ce57c48fec8fe9 111 SUPERFAMILY SSF46785 6 101 1.37E-29 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_21020 d4a5664ecbf5bf2683ce57c48fec8fe9 111 Gene3D G3DSA:1.10.10.10 4 110 1.5E-34 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_21020 d4a5664ecbf5bf2683ce57c48fec8fe9 111 Pfam PF01638 HxlR-like helix-turn-helix 16 102 3.1E-31 T 13-10-2018 IPR002577 Helix-turn-helix, HxlR type COP00_23535 2fc8ef08353dd01e9e9d912f45d1c27f 72 SUPERFAMILY SSF46785 2 66 5.64E-18 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_23535 2fc8ef08353dd01e9e9d912f45d1c27f 72 Pfam PF01726 LexA DNA binding domain 2 61 1.8E-21 T 13-10-2018 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 COP00_23535 2fc8ef08353dd01e9e9d912f45d1c27f 72 Gene3D G3DSA:1.10.10.10 1 64 1.4E-21 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_18125 67ce059f09bb179b384329773983daf4 480 Gene3D G3DSA:1.20.1730.10 7 479 1.5E-98 T 13-10-2018 IPR038377 Sodium/glucose symporter superfamily COP00_18125 67ce059f09bb179b384329773983daf4 480 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 29 427 3.1E-99 T 13-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 COP00_18125 67ce059f09bb179b384329773983daf4 480 TIGRFAM TIGR02121 Na_Pro_sym: sodium/proline symporter 2 478 1.6E-218 T 13-10-2018 IPR011851 Sodium/proline symporter GO:0005298|GO:0006814|GO:0015824|GO:0016021|GO:0031402 COP00_18125 67ce059f09bb179b384329773983daf4 480 Pfam PF00474 Sodium:solute symporter family 29 427 2.1E-107 T 13-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 COP00_18125 67ce059f09bb179b384329773983daf4 480 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 409 429 - T 13-10-2018 IPR018212 Sodium/solute symporter, conserved site COP00_00810 0be70fe1dde03014ab94459acaabb80d 143 Gene3D G3DSA:2.40.330.20 1 141 3.9E-55 T 13-10-2018 IPR038619 MraZ superfamily COP00_00810 0be70fe1dde03014ab94459acaabb80d 143 Hamap MF_01008 Transcriptional regulator MraZ [mraZ]. 1 143 61.041 T 13-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 COP00_00810 0be70fe1dde03014ab94459acaabb80d 143 Pfam PF02381 MraZ protein, putative antitoxin-like 1 70 8.3E-24 T 13-10-2018 IPR020603 MraZ domain COP00_00810 0be70fe1dde03014ab94459acaabb80d 143 Pfam PF02381 MraZ protein, putative antitoxin-like 72 141 9.9E-27 T 13-10-2018 IPR020603 MraZ domain COP00_00810 0be70fe1dde03014ab94459acaabb80d 143 SUPERFAMILY SSF89447 1 136 9.1E-54 T 13-10-2018 IPR037914 SpoVT-AbrB domain superfamily COP00_00810 0be70fe1dde03014ab94459acaabb80d 143 TIGRFAM TIGR00242 TIGR00242: division/cell wall cluster transcriptional repressor MraZ 1 143 3.7E-65 T 13-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 COP00_00810 0be70fe1dde03014ab94459acaabb80d 143 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 1 138 2.0E-76 T 13-10-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 COP00_07620 d74b1ca2067c175fd8370c7d37418a85 214 SUPERFAMILY SSF52172 2 131 2.85E-31 T 13-10-2018 IPR011006 CheY-like superfamily COP00_07620 d74b1ca2067c175fd8370c7d37418a85 214 Pfam PF00196 Bacterial regulatory proteins, luxR family 149 204 7.3E-20 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 COP00_07620 d74b1ca2067c175fd8370c7d37418a85 214 SMART SM00421 147 204 9.9E-21 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 COP00_07620 d74b1ca2067c175fd8370c7d37418a85 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 150 164 1.9E-14 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 COP00_07620 d74b1ca2067c175fd8370c7d37418a85 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 180 192 1.9E-14 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 COP00_07620 d74b1ca2067c175fd8370c7d37418a85 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 164 180 1.9E-14 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 COP00_07620 d74b1ca2067c175fd8370c7d37418a85 214 ProSitePatterns PS00622 LuxR-type HTH domain signature. 164 191 - T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 COP00_07620 d74b1ca2067c175fd8370c7d37418a85 214 SUPERFAMILY SSF46894 137 211 1.43E-21 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 COP00_07620 d74b1ca2067c175fd8370c7d37418a85 214 Gene3D G3DSA:3.40.50.12740 2 210 1.0E-61 T 13-10-2018 COP00_07620 d74b1ca2067c175fd8370c7d37418a85 214 Pfam PF00072 Response regulator receiver domain 4 116 5.0E-26 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 COP00_07620 d74b1ca2067c175fd8370c7d37418a85 214 SMART SM00448 2 116 6.5E-27 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 COP00_09650 447a72935d0d3f99eadff5ac76b07c8a 273 Pfam PF03180 NLPA lipoprotein 34 270 2.1E-78 T 13-10-2018 IPR004872 Lipoprotein NlpA family COP00_09650 447a72935d0d3f99eadff5ac76b07c8a 273 Gene3D G3DSA:3.40.190.10 113 221 2.2E-83 T 13-10-2018 COP00_09650 447a72935d0d3f99eadff5ac76b07c8a 273 PIRSF PIRSF002854 1 270 2.0E-82 T 13-10-2018 IPR004872 Lipoprotein NlpA family COP00_09650 447a72935d0d3f99eadff5ac76b07c8a 273 SUPERFAMILY SSF53850 33 271 2.0E-73 T 13-10-2018 COP00_09650 447a72935d0d3f99eadff5ac76b07c8a 273 Gene3D G3DSA:3.40.190.10 48 264 2.2E-83 T 13-10-2018 COP00_08090 f2064ebd95cd9ad36fcf4653d4be10a9 211 Gene3D G3DSA:3.40.50.300 2 211 2.3E-66 T 13-10-2018 COP00_08090 f2064ebd95cd9ad36fcf4653d4be10a9 211 Hamap MF_00551 Uridine kinase [udk]. 2 206 42.264 T 13-10-2018 IPR026008 Uridine kinase GO:0004849|GO:0005524|GO:0016773 KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193 COP00_08090 f2064ebd95cd9ad36fcf4653d4be10a9 211 PRINTS PR00988 Uridine kinase signature 35 46 1.2E-36 T 13-10-2018 COP00_08090 f2064ebd95cd9ad36fcf4653d4be10a9 211 PRINTS PR00988 Uridine kinase signature 136 146 1.2E-36 T 13-10-2018 COP00_08090 f2064ebd95cd9ad36fcf4653d4be10a9 211 PRINTS PR00988 Uridine kinase signature 5 22 1.2E-36 T 13-10-2018 COP00_08090 f2064ebd95cd9ad36fcf4653d4be10a9 211 PRINTS PR00988 Uridine kinase signature 80 95 1.2E-36 T 13-10-2018 COP00_08090 f2064ebd95cd9ad36fcf4653d4be10a9 211 PRINTS PR00988 Uridine kinase signature 172 185 1.2E-36 T 13-10-2018 COP00_08090 f2064ebd95cd9ad36fcf4653d4be10a9 211 PRINTS PR00988 Uridine kinase signature 150 161 1.2E-36 T 13-10-2018 COP00_08090 f2064ebd95cd9ad36fcf4653d4be10a9 211 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 7 192 2.9E-43 T 13-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 COP00_08090 f2064ebd95cd9ad36fcf4653d4be10a9 211 TIGRFAM TIGR00235 udk: uridine kinase 4 206 3.7E-94 T 13-10-2018 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|Reactome: R-HSA-73614 COP00_08090 f2064ebd95cd9ad36fcf4653d4be10a9 211 SUPERFAMILY SSF52540 3 197 2.19E-51 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_01945 5268002b91d9e25194d0183f55ab24ca 194 ProSitePatterns PS01081 TetR-type HTH domain signature. 23 54 - T 13-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site COP00_01945 5268002b91d9e25194d0183f55ab24ca 194 Gene3D G3DSA:1.10.357.10 63 192 1.3E-6 T 13-10-2018 COP00_01945 5268002b91d9e25194d0183f55ab24ca 194 SUPERFAMILY SSF46689 4 66 3.24E-17 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 COP00_01945 5268002b91d9e25194d0183f55ab24ca 194 Gene3D G3DSA:1.10.10.60 2 55 3.0E-18 T 13-10-2018 COP00_01945 5268002b91d9e25194d0183f55ab24ca 194 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 56 9.6E-16 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 COP00_01945 5268002b91d9e25194d0183f55ab24ca 194 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 3.3E-9 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 COP00_01945 5268002b91d9e25194d0183f55ab24ca 194 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 3.3E-9 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 COP00_04165 07245732376033073168046ff7da9beb 203 Pfam PF00386 C1q domain 62 176 9.3E-9 T 13-10-2018 IPR001073 C1q domain COP00_04165 07245732376033073168046ff7da9beb 203 Gene3D G3DSA:2.60.120.40 55 203 1.8E-12 T 13-10-2018 IPR008983 Tumour necrosis factor-like domain superfamily GO:0005515 COP00_04165 07245732376033073168046ff7da9beb 203 SMART SM00110 54 185 5.2E-4 T 13-10-2018 IPR001073 C1q domain COP00_04165 07245732376033073168046ff7da9beb 203 SUPERFAMILY SSF49842 59 199 7.1E-15 T 13-10-2018 IPR008983 Tumour necrosis factor-like domain superfamily GO:0005515 COP00_13035 266f7ec705aba57f9b12d8c19aae47a4 841 SUPERFAMILY SSF81886 571 829 1.44E-77 T 13-10-2018 IPR036266 SecA, Wing/Scaffold superfamily COP00_13035 266f7ec705aba57f9b12d8c19aae47a4 841 Gene3D G3DSA:3.40.50.300 14 396 0.0 T 13-10-2018 COP00_13035 266f7ec705aba57f9b12d8c19aae47a4 841 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 26 496 3.7E-246 T 13-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 COP00_13035 266f7ec705aba57f9b12d8c19aae47a4 841 Pfam PF02810 SEC-C motif 821 839 7.7E-8 T 13-10-2018 IPR004027 SEC-C motif COP00_13035 266f7ec705aba57f9b12d8c19aae47a4 841 SMART SM00958 226 338 1.4E-66 T 13-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 COP00_13035 266f7ec705aba57f9b12d8c19aae47a4 841 SUPERFAMILY SSF52540 397 568 2.59E-52 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_13035 266f7ec705aba57f9b12d8c19aae47a4 841 SUPERFAMILY SSF81767 225 348 9.16E-47 T 13-10-2018 IPR036670 SecA, preprotein cross-linking domain superfamily GO:0016020|GO:0017038 COP00_13035 266f7ec705aba57f9b12d8c19aae47a4 841 Gene3D G3DSA:1.10.1200.230 621 705 0.0 T 13-10-2018 COP00_13035 266f7ec705aba57f9b12d8c19aae47a4 841 Gene3D G3DSA:3.10.450.50 774 840 2.7E-8 T 13-10-2018 COP00_13035 266f7ec705aba57f9b12d8c19aae47a4 841 SMART SM00957 5 382 9.7E-288 T 13-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 COP00_13035 266f7ec705aba57f9b12d8c19aae47a4 841 Hamap MF_01382 Protein translocase subunit SecA [secA]. 4 781 19.672 T 13-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 COP00_13035 266f7ec705aba57f9b12d8c19aae47a4 841 Gene3D G3DSA:3.40.50.300 397 570 0.0 T 13-10-2018 COP00_13035 266f7ec705aba57f9b12d8c19aae47a4 841 ProSitePatterns PS01312 SecA family signature. 480 495 - T 13-10-2018 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 COP00_13035 266f7ec705aba57f9b12d8c19aae47a4 841 Pfam PF07517 SecA DEAD-like domain 6 382 2.7E-129 T 13-10-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 COP00_13035 266f7ec705aba57f9b12d8c19aae47a4 841 Pfam PF07516 SecA Wing and Scaffold domain 568 778 4.8E-65 T 13-10-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 COP00_13035 266f7ec705aba57f9b12d8c19aae47a4 841 PRINTS PR00906 SecA protein signature 115 125 1.6E-71 T 13-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 COP00_13035 266f7ec705aba57f9b12d8c19aae47a4 841 PRINTS PR00906 SecA protein signature 61 85 1.6E-71 T 13-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 COP00_13035 266f7ec705aba57f9b12d8c19aae47a4 841 PRINTS PR00906 SecA protein signature 168 188 1.6E-71 T 13-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 COP00_13035 266f7ec705aba57f9b12d8c19aae47a4 841 PRINTS PR00906 SecA protein signature 356 373 1.6E-71 T 13-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 COP00_13035 266f7ec705aba57f9b12d8c19aae47a4 841 PRINTS PR00906 SecA protein signature 393 406 1.6E-71 T 13-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 COP00_13035 266f7ec705aba57f9b12d8c19aae47a4 841 PRINTS PR00906 SecA protein signature 99 113 1.6E-71 T 13-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 COP00_13035 266f7ec705aba57f9b12d8c19aae47a4 841 PRINTS PR00906 SecA protein signature 319 341 1.6E-71 T 13-10-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 COP00_13035 266f7ec705aba57f9b12d8c19aae47a4 841 Pfam PF01043 SecA preprotein cross-linking domain 230 338 6.3E-42 T 13-10-2018 IPR011130 SecA, preprotein cross-linking domain GO:0016020|GO:0017038 COP00_13035 266f7ec705aba57f9b12d8c19aae47a4 841 Gene3D G3DSA:3.90.1440.10 227 348 0.0 T 13-10-2018 COP00_13035 266f7ec705aba57f9b12d8c19aae47a4 841 SUPERFAMILY SSF52540 5 395 4.28E-85 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_13035 266f7ec705aba57f9b12d8c19aae47a4 841 Gene3D G3DSA:1.10.3060.10 571 773 0.0 T 13-10-2018 COP00_18135 17aec246fd2eaaa81bbed4aabd04e7c0 281 TIGRFAM TIGR03943 TIGR03943: TIGR03943 family protein 20 276 6.5E-61 T 13-10-2018 IPR015402 Protein of unknown function DUF1980 COP00_18135 17aec246fd2eaaa81bbed4aabd04e7c0 281 Pfam PF09323 Domain of unknown function (DUF1980) 1 186 4.8E-61 T 13-10-2018 IPR015402 Protein of unknown function DUF1980 COP00_10815 65876c10c916cfa0676abe7c0ee66bf9 327 Gene3D G3DSA:2.70.70.10 114 326 1.3E-57 T 13-10-2018 IPR011055 Duplicated hybrid motif COP00_10815 65876c10c916cfa0676abe7c0ee66bf9 327 Pfam PF01551 Peptidase family M23 203 301 2.3E-20 T 13-10-2018 IPR016047 Peptidase M23 COP00_10815 65876c10c916cfa0676abe7c0ee66bf9 327 SUPERFAMILY SSF51261 116 314 4.92E-35 T 13-10-2018 IPR011055 Duplicated hybrid motif COP00_20715 0467079c6fbb6898ca7051460e298ef5 471 TIGRFAM TIGR00852 pts-Glc: PTS system, maltose and glucose-specific subfamily, IIC component 165 452 4.1E-92 T 13-10-2018 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component GO:0008982|GO:0009401|GO:0016021 COP00_20715 0467079c6fbb6898ca7051460e298ef5 471 Pfam PF00367 phosphotransferase system, EIIB 9 42 3.0E-14 T 13-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 COP00_20715 0467079c6fbb6898ca7051460e298ef5 471 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 29 111 5.0E-24 T 13-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 COP00_20715 0467079c6fbb6898ca7051460e298ef5 471 TIGRFAM TIGR01992 PTS-IIBC-Tre: PTS system, trehalose-specific IIBC component 6 465 7.3E-218 T 13-10-2018 IPR011296 Phosphotransferase system, trehalose-specific IIBC component GO:0015574|GO:0015771|GO:0016021 KEGG: 00500+2.7.1.201 COP00_20715 0467079c6fbb6898ca7051460e298ef5 471 SUPERFAMILY SSF55604 8 83 7.19E-20 T 13-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 COP00_20715 0467079c6fbb6898ca7051460e298ef5 471 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 20 37 - T 13-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 COP00_20715 0467079c6fbb6898ca7051460e298ef5 471 Gene3D G3DSA:3.30.1360.60 2 78 2.8E-25 T 13-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 COP00_20715 0467079c6fbb6898ca7051460e298ef5 471 Pfam PF02378 Phosphotransferase system, EIIC 112 410 8.7E-47 T 13-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 COP00_06380 4635b121cb458298586e1aac18f7e35f 307 SUPERFAMILY SSF56281 2 305 8.74E-87 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like COP00_06380 4635b121cb458298586e1aac18f7e35f 307 TIGRFAM TIGR02651 RNase_Z: ribonuclease Z 2 304 1.9E-117 T 13-10-2018 IPR013471 Ribonuclease Z/BN GO:0016891|GO:0042779 COP00_06380 4635b121cb458298586e1aac18f7e35f 307 Pfam PF12706 Beta-lactamase superfamily domain 35 152 2.6E-9 T 13-10-2018 IPR001279 Metallo-beta-lactamase COP00_06380 4635b121cb458298586e1aac18f7e35f 307 Pfam PF12706 Beta-lactamase superfamily domain 201 270 1.5E-7 T 13-10-2018 IPR001279 Metallo-beta-lactamase COP00_06380 4635b121cb458298586e1aac18f7e35f 307 Gene3D G3DSA:3.60.15.10 1 304 7.4E-108 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like COP00_06380 4635b121cb458298586e1aac18f7e35f 307 Hamap MF_01818 Ribonuclease BN [rbn]. 1 304 41.922 T 13-10-2018 IPR013471 Ribonuclease Z/BN GO:0016891|GO:0042779 COP00_00755 2c58b5c8269d044d5bdb4a4c1343a691 188 Gene3D G3DSA:3.40.50.150 1 187 5.2E-57 T 13-10-2018 COP00_00755 2c58b5c8269d044d5bdb4a4c1343a691 188 Pfam PF03602 Conserved hypothetical protein 95 1 181 5.9E-58 T 13-10-2018 COP00_00755 2c58b5c8269d044d5bdb4a4c1343a691 188 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 2 181 1.1E-61 T 13-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 COP00_00755 2c58b5c8269d044d5bdb4a4c1343a691 188 PIRSF PIRSF004553 1 183 2.7E-50 T 13-10-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 COP00_00755 2c58b5c8269d044d5bdb4a4c1343a691 188 SUPERFAMILY SSF53335 1 181 1.44E-51 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase COP00_00755 2c58b5c8269d044d5bdb4a4c1343a691 188 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 117 123 - T 13-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 COP00_20220 d8fe7a3be392c4d6bff90258d511896d 476 Gene3D G3DSA:3.60.20.10 12 458 4.5E-178 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal COP00_20220 d8fe7a3be392c4d6bff90258d511896d 476 SUPERFAMILY SSF56235 12 236 5.49E-71 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal COP00_20220 d8fe7a3be392c4d6bff90258d511896d 476 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 12 457 8.3E-174 T 13-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 COP00_20220 d8fe7a3be392c4d6bff90258d511896d 476 PIRSF PIRSF000485 8 473 8.7E-191 T 13-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 COP00_20220 d8fe7a3be392c4d6bff90258d511896d 476 Pfam PF00156 Phosphoribosyl transferase domain 273 382 5.3E-8 T 13-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 COP00_20220 d8fe7a3be392c4d6bff90258d511896d 476 Pfam PF13522 Glutamine amidotransferase domain 70 205 8.3E-23 T 13-10-2018 COP00_20220 d8fe7a3be392c4d6bff90258d511896d 476 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 11 456 47.312 T 13-10-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 COP00_20220 d8fe7a3be392c4d6bff90258d511896d 476 SUPERFAMILY SSF53271 247 469 1.57E-77 T 13-10-2018 IPR029057 Phosphoribosyltransferase-like COP00_20220 d8fe7a3be392c4d6bff90258d511896d 476 Gene3D G3DSA:3.40.50.2020 271 435 4.5E-178 T 13-10-2018 COP00_09070 7913d3bf3f15bcff878424540e6ff237 879 SMART SM00279 175 210 2.3E-16 T 13-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 COP00_09070 7913d3bf3f15bcff878424540e6ff237 879 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 174 268 9.7E-34 T 13-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 COP00_09070 7913d3bf3f15bcff878424540e6ff237 879 Gene3D G3DSA:3.40.50.1010 7 280 2.0E-99 T 13-10-2018 COP00_09070 7913d3bf3f15bcff878424540e6ff237 879 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 6 172 6.0E-54 T 13-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 COP00_09070 7913d3bf3f15bcff878424540e6ff237 879 Gene3D G3DSA:1.20.1060.10 494 608 9.4E-45 T 13-10-2018 COP00_09070 7913d3bf3f15bcff878424540e6ff237 879 SUPERFAMILY SSF88723 4 172 3.6E-55 T 13-10-2018 IPR029060 PIN-like domain superfamily COP00_09070 7913d3bf3f15bcff878424540e6ff237 879 Gene3D G3DSA:3.30.70.370 614 875 2.0E-113 T 13-10-2018 COP00_09070 7913d3bf3f15bcff878424540e6ff237 879 SMART SM00482 636 843 4.5E-124 T 13-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 COP00_09070 7913d3bf3f15bcff878424540e6ff237 879 Gene3D G3DSA:1.10.150.20 660 803 2.0E-113 T 13-10-2018 COP00_09070 7913d3bf3f15bcff878424540e6ff237 879 Pfam PF00476 DNA polymerase family A 501 877 6.2E-166 T 13-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 COP00_09070 7913d3bf3f15bcff878424540e6ff237 879 Gene3D G3DSA:3.30.420.10 300 492 5.5E-64 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 COP00_09070 7913d3bf3f15bcff878424540e6ff237 879 SMART SM00474 301 469 4.4E-22 T 13-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 COP00_09070 7913d3bf3f15bcff878424540e6ff237 879 PRINTS PR00868 DNA-polymerase family A (pol I) signature 742 753 8.1E-82 T 13-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 COP00_09070 7913d3bf3f15bcff878424540e6ff237 879 PRINTS PR00868 DNA-polymerase family A (pol I) signature 628 643 8.1E-82 T 13-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 COP00_09070 7913d3bf3f15bcff878424540e6ff237 879 PRINTS PR00868 DNA-polymerase family A (pol I) signature 605 627 8.1E-82 T 13-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 COP00_09070 7913d3bf3f15bcff878424540e6ff237 879 PRINTS PR00868 DNA-polymerase family A (pol I) signature 681 694 8.1E-82 T 13-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 COP00_09070 7913d3bf3f15bcff878424540e6ff237 879 PRINTS PR00868 DNA-polymerase family A (pol I) signature 705 730 8.1E-82 T 13-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 COP00_09070 7913d3bf3f15bcff878424540e6ff237 879 PRINTS PR00868 DNA-polymerase family A (pol I) signature 651 674 8.1E-82 T 13-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 COP00_09070 7913d3bf3f15bcff878424540e6ff237 879 PRINTS PR00868 DNA-polymerase family A (pol I) signature 826 839 8.1E-82 T 13-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 COP00_09070 7913d3bf3f15bcff878424540e6ff237 879 PRINTS PR00868 DNA-polymerase family A (pol I) signature 764 775 8.1E-82 T 13-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 COP00_09070 7913d3bf3f15bcff878424540e6ff237 879 PRINTS PR00868 DNA-polymerase family A (pol I) signature 796 812 8.1E-82 T 13-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 COP00_09070 7913d3bf3f15bcff878424540e6ff237 879 SMART SM00475 5 264 1.0E-147 T 13-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 COP00_09070 7913d3bf3f15bcff878424540e6ff237 879 TIGRFAM TIGR00593 pola: DNA polymerase I 7 879 0.0 T 13-10-2018 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 COP00_09070 7913d3bf3f15bcff878424540e6ff237 879 SUPERFAMILY SSF56672 473 879 2.67E-161 T 13-10-2018 COP00_09070 7913d3bf3f15bcff878424540e6ff237 879 Gene3D G3DSA:1.10.150.20 176 249 2.0E-99 T 13-10-2018 COP00_09070 7913d3bf3f15bcff878424540e6ff237 879 SUPERFAMILY SSF53098 306 470 2.28E-45 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily COP00_09070 7913d3bf3f15bcff878424540e6ff237 879 ProSitePatterns PS00447 DNA polymerase family A signature. 705 724 - T 13-10-2018 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 COP00_09070 7913d3bf3f15bcff878424540e6ff237 879 SUPERFAMILY SSF47807 173 287 3.59E-33 T 13-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily COP00_03150 693829afbb4e99632323eb8e9b892d4e 89 SMART SM00530 26 81 6.6E-13 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 COP00_03150 693829afbb4e99632323eb8e9b892d4e 89 SUPERFAMILY SSF47413 24 84 3.49E-15 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 COP00_03150 693829afbb4e99632323eb8e9b892d4e 89 Gene3D G3DSA:1.10.260.40 19 88 9.6E-16 T 13-10-2018 COP00_03150 693829afbb4e99632323eb8e9b892d4e 89 Pfam PF01381 Helix-turn-helix 28 81 3.2E-13 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 COP00_15675 8cdb7af15a29fdc3a063766373fdb9fb 52 TIGRFAM TIGR04129 CxxH_BA5709: CxxH/CxxC protein, BA_5709 family 2 49 4.3E-21 T 13-10-2018 IPR025626 YyzF-like protein COP00_15675 8cdb7af15a29fdc3a063766373fdb9fb 52 Pfam PF14116 YyzF-like protein 3 50 1.8E-21 T 13-10-2018 IPR025626 YyzF-like protein COP00_10355 b3a1fce73b47f1bd645a052529f45cfe 387 Pfam PF00155 Aminotransferase class I and II 41 382 1.5E-39 T 13-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 COP00_10355 b3a1fce73b47f1bd645a052529f45cfe 387 TIGRFAM TIGR04350 C_S_lyase_PatB: putative C-S lyase 3 386 1.4E-154 T 13-10-2018 IPR027619 Putative C-S lyase KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8 COP00_10355 b3a1fce73b47f1bd645a052529f45cfe 387 SUPERFAMILY SSF53383 3 386 1.24E-101 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase COP00_10355 b3a1fce73b47f1bd645a052529f45cfe 387 Gene3D G3DSA:3.90.1150.10 11 382 3.4E-151 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 COP00_10355 b3a1fce73b47f1bd645a052529f45cfe 387 Gene3D G3DSA:3.40.640.10 66 290 3.4E-151 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 COP00_05550 294e995836809430f46130f2cc3d0874 137 TIGRFAM TIGR00160 MGSA: methylglyoxal synthase 2 121 8.7E-61 T 13-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 COP00_05550 294e995836809430f46130f2cc3d0874 137 Hamap MF_00549 Methylglyoxal synthase [mgsA]. 1 120 33.403 T 13-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 COP00_05550 294e995836809430f46130f2cc3d0874 137 SUPERFAMILY SSF52335 2 130 7.2E-51 T 13-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily COP00_05550 294e995836809430f46130f2cc3d0874 137 Pfam PF02142 MGS-like domain 15 107 2.3E-18 T 13-10-2018 IPR011607 Methylglyoxal synthase-like domain COP00_05550 294e995836809430f46130f2cc3d0874 137 Gene3D G3DSA:3.40.50.1380 1 132 2.4E-54 T 13-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily COP00_05550 294e995836809430f46130f2cc3d0874 137 ProSitePatterns PS01335 Methylglyoxal synthase active site. 54 62 - T 13-10-2018 IPR018148 Methylglyoxal synthase, active site GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 COP00_05550 294e995836809430f46130f2cc3d0874 137 PIRSF PIRSF006614 1 134 5.0E-60 T 13-10-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 COP00_05550 294e995836809430f46130f2cc3d0874 137 SMART SM00851 14 107 1.0E-22 T 13-10-2018 IPR011607 Methylglyoxal synthase-like domain COP00_13205 5294d596a4a6065785ccbba70db7d5a8 495 Gene3D G3DSA:3.40.50.12090 53 147 3.2E-7 T 13-10-2018 COP00_13205 5294d596a4a6065785ccbba70db7d5a8 495 Gene3D G3DSA:3.40.630.40 318 495 6.6E-61 T 13-10-2018 COP00_13205 5294d596a4a6065785ccbba70db7d5a8 495 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 322 491 5.6E-53 T 13-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 COP00_13205 5294d596a4a6065785ccbba70db7d5a8 495 SMART SM00646 380 491 2.8E-41 T 13-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 COP00_13205 5294d596a4a6065785ccbba70db7d5a8 495 Pfam PF04122 Putative cell wall binding repeat 2 129 212 1.7E-16 T 13-10-2018 IPR007253 Putative cell wall binding repeat 2 COP00_13205 5294d596a4a6065785ccbba70db7d5a8 495 Pfam PF04122 Putative cell wall binding repeat 2 223 309 1.2E-16 T 13-10-2018 IPR007253 Putative cell wall binding repeat 2 COP00_13205 5294d596a4a6065785ccbba70db7d5a8 495 Pfam PF04122 Putative cell wall binding repeat 2 30 116 2.5E-16 T 13-10-2018 IPR007253 Putative cell wall binding repeat 2 COP00_13205 5294d596a4a6065785ccbba70db7d5a8 495 SUPERFAMILY SSF53187 320 494 4.08E-53 T 13-10-2018 COP00_18080 6f88b7f0941fd93e759a1f7897181d10 316 Gene3D G3DSA:3.40.50.720 1 148 1.2E-56 T 13-10-2018 COP00_18080 6f88b7f0941fd93e759a1f7897181d10 316 Hamap MF_00488 L-lactate dehydrogenase [ldh]. 6 315 47.909 T 13-10-2018 IPR011304 L-lactate dehydrogenase GO:0004459|GO:0005737|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|Reactome: R-HSA-70268 COP00_18080 6f88b7f0941fd93e759a1f7897181d10 316 PRINTS PR00086 L-lactate dehydrogenase signature 144 162 4.5E-50 T 13-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 COP00_18080 6f88b7f0941fd93e759a1f7897181d10 316 PRINTS PR00086 L-lactate dehydrogenase signature 8 32 4.5E-50 T 13-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 COP00_18080 6f88b7f0941fd93e759a1f7897181d10 316 PRINTS PR00086 L-lactate dehydrogenase signature 174 187 4.5E-50 T 13-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 COP00_18080 6f88b7f0941fd93e759a1f7897181d10 316 PRINTS PR00086 L-lactate dehydrogenase signature 120 140 4.5E-50 T 13-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 COP00_18080 6f88b7f0941fd93e759a1f7897181d10 316 PRINTS PR00086 L-lactate dehydrogenase signature 33 57 4.5E-50 T 13-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 COP00_18080 6f88b7f0941fd93e759a1f7897181d10 316 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 9 146 7.7E-48 T 13-10-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 COP00_18080 6f88b7f0941fd93e759a1f7897181d10 316 SUPERFAMILY SSF51735 4 146 4.61E-55 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily COP00_18080 6f88b7f0941fd93e759a1f7897181d10 316 SUPERFAMILY SSF56327 147 312 7.93E-60 T 13-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 COP00_18080 6f88b7f0941fd93e759a1f7897181d10 316 Gene3D G3DSA:3.90.110.10 149 314 7.8E-68 T 13-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 COP00_18080 6f88b7f0941fd93e759a1f7897181d10 316 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 149 315 2.7E-42 T 13-10-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 COP00_18080 6f88b7f0941fd93e759a1f7897181d10 316 TIGRFAM TIGR01771 L-LDH-NAD: L-lactate dehydrogenase 11 309 6.9E-133 T 13-10-2018 IPR011304 L-lactate dehydrogenase GO:0004459|GO:0005737|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|Reactome: R-HSA-70268 COP00_18080 6f88b7f0941fd93e759a1f7897181d10 316 ProSitePatterns PS00064 L-lactate dehydrogenase active site. 176 182 - T 13-10-2018 IPR018177 L-lactate dehydrogenase, active site GO:0004459|GO:0055114 KEGG: 00010+1.1.1.27|KEGG: 00270+1.1.1.27|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-6901|Reactome: R-HSA-70268 COP00_18080 6f88b7f0941fd93e759a1f7897181d10 316 PIRSF PIRSF000102 3 314 1.9E-114 T 13-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 COP00_15905 7f54ab45ee365308f39eac5e164905ca 628 Gene3D G3DSA:1.10.150.570 568 620 8.5E-24 T 13-10-2018 COP00_15905 7f54ab45ee365308f39eac5e164905ca 628 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 368 391 - T 13-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 COP00_15905 7f54ab45ee365308f39eac5e164905ca 628 Gene3D G3DSA:3.50.50.60 2 221 2.9E-82 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily COP00_15905 7f54ab45ee365308f39eac5e164905ca 628 Gene3D G3DSA:3.50.50.60 296 458 2.8E-57 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily COP00_15905 7f54ab45ee365308f39eac5e164905ca 628 Pfam PF01134 Glucose inhibited division protein A 9 399 1.4E-171 T 13-10-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 COP00_15905 7f54ab45ee365308f39eac5e164905ca 628 Gene3D G3DSA:1.10.10.1800 459 549 1.9E-26 T 13-10-2018 COP00_15905 7f54ab45ee365308f39eac5e164905ca 628 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 273 287 - T 13-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 COP00_15905 7f54ab45ee365308f39eac5e164905ca 628 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 8 620 2.0E-300 T 13-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 COP00_15905 7f54ab45ee365308f39eac5e164905ca 628 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 6 623 42.629 T 13-10-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 COP00_15905 7f54ab45ee365308f39eac5e164905ca 628 SMART SM01228 545 616 1.0E-41 T 13-10-2018 COP00_15905 7f54ab45ee365308f39eac5e164905ca 628 SUPERFAMILY SSF51905 7 261 1.21E-46 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily COP00_15905 7f54ab45ee365308f39eac5e164905ca 628 Pfam PF13932 GidA associated domain 401 615 3.6E-80 T 13-10-2018 IPR026904 GidA associated domain 3 Reactome: R-HSA-6787450 COP00_18925 91a93c8cd81d571a9fe09e46bcaf63cc 228 SUPERFAMILY SSF54909 114 188 3.04E-9 T 13-10-2018 IPR011008 Dimeric alpha-beta barrel COP00_18925 91a93c8cd81d571a9fe09e46bcaf63cc 228 Pfam PF07883 Cupin domain 40 89 8.8E-11 T 13-10-2018 IPR013096 Cupin 2, conserved barrel COP00_18925 91a93c8cd81d571a9fe09e46bcaf63cc 228 Gene3D G3DSA:2.60.120.10 1 105 2.7E-25 T 13-10-2018 IPR014710 RmlC-like jelly roll fold COP00_18925 91a93c8cd81d571a9fe09e46bcaf63cc 228 Pfam PF16291 Domain of unknown function (DUF4937 113 200 3.7E-29 T 13-10-2018 IPR032555 Domain of unknown function DUF4937 COP00_18925 91a93c8cd81d571a9fe09e46bcaf63cc 228 SUPERFAMILY SSF51182 4 104 1.1E-18 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily COP00_01405 066dcac66288f9e6f10f4ad6f9bbdefc 143 Pfam PF03748 Flagellar basal body-associated protein FliL 50 143 4.0E-20 T 13-10-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 COP00_13305 a00a592775d6ee4592c00bf5aa544ed6 316 PIRSF PIRSF036894 3 316 1.7E-115 T 13-10-2018 IPR014628 Mannose-6-phosphate isomerase, Firmicutes type, short form GO:0004476|GO:0005975 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882 COP00_13305 a00a592775d6ee4592c00bf5aa544ed6 316 TIGRFAM TIGR00218 manA: mannose-6-phosphate isomerase, class I 104 315 4.4E-54 T 13-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 COP00_13305 a00a592775d6ee4592c00bf5aa544ed6 316 Gene3D G3DSA:2.60.120.10 1 227 1.2E-81 T 13-10-2018 IPR014710 RmlC-like jelly roll fold COP00_13305 a00a592775d6ee4592c00bf5aa544ed6 316 Pfam PF01238 Phosphomannose isomerase type I 7 315 3.5E-48 T 13-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 COP00_13305 a00a592775d6ee4592c00bf5aa544ed6 316 Gene3D G3DSA:2.60.120.10 228 316 5.5E-31 T 13-10-2018 IPR014710 RmlC-like jelly roll fold COP00_13305 a00a592775d6ee4592c00bf5aa544ed6 316 SUPERFAMILY SSF51182 3 315 2.45E-92 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily COP00_13875 db03c7d132cf06a248da193cf82c04f4 347 Gene3D G3DSA:3.40.50.11030 220 347 3.3E-39 T 13-10-2018 IPR038385 Threonylcarbamoyl-AMP synthase, C-terminal domain superfamily COP00_13875 db03c7d132cf06a248da193cf82c04f4 347 Pfam PF01300 Telomere recombination 27 203 2.7E-60 T 13-10-2018 IPR006070 YrdC-like domain GO:0003725 COP00_13875 db03c7d132cf06a248da193cf82c04f4 347 Gene3D G3DSA:3.90.870.10 3 219 2.5E-83 T 13-10-2018 COP00_13875 db03c7d132cf06a248da193cf82c04f4 347 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 19 212 2.6E-69 T 13-10-2018 IPR006070 YrdC-like domain GO:0003725 COP00_13875 db03c7d132cf06a248da193cf82c04f4 347 SUPERFAMILY SSF55821 14 210 5.49E-67 T 13-10-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain superfamily COP00_13875 db03c7d132cf06a248da193cf82c04f4 347 PIRSF PIRSF004930 1 347 1.8E-134 T 13-10-2018 IPR010923 tRNA threonylcarbamoyladenosine biosynthesis protein SUA5 COP00_13875 db03c7d132cf06a248da193cf82c04f4 347 Pfam PF03481 Putative GTP-binding controlling metal-binding 205 341 4.1E-26 T 13-10-2018 IPR005145 Putative GTP-binding controlling metal-binding domain COP00_01780 00a5cd74b0192f0cccb451a796b8548e 868 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 4 859 25.572 T 13-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 COP00_01780 00a5cd74b0192f0cccb451a796b8548e 868 Gene3D G3DSA:1.10.1420.10 252 547 4.6E-102 T 13-10-2018 COP00_01780 00a5cd74b0192f0cccb451a796b8548e 868 SUPERFAMILY SSF48334 253 552 1.83E-90 T 13-10-2018 IPR036187 DNA mismatch repair protein MutS, core domain superfamily COP00_01780 00a5cd74b0192f0cccb451a796b8548e 868 SMART SM00534 595 782 6.7E-121 T 13-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 COP00_01780 00a5cd74b0192f0cccb451a796b8548e 868 Pfam PF01624 MutS domain I 5 116 2.2E-47 T 13-10-2018 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 COP00_01780 00a5cd74b0192f0cccb451a796b8548e 868 Pfam PF05188 MutS domain II 125 239 5.5E-14 T 13-10-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 COP00_01780 00a5cd74b0192f0cccb451a796b8548e 868 SUPERFAMILY SSF55271 2 112 1.09E-42 T 13-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 COP00_01780 00a5cd74b0192f0cccb451a796b8548e 868 Pfam PF05190 MutS family domain IV 415 506 3.5E-29 T 13-10-2018 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 COP00_01780 00a5cd74b0192f0cccb451a796b8548e 868 SMART SM00533 270 578 5.0E-119 T 13-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 COP00_01780 00a5cd74b0192f0cccb451a796b8548e 868 Gene3D G3DSA:1.10.1420.10 387 523 4.6E-102 T 13-10-2018 COP00_01780 00a5cd74b0192f0cccb451a796b8548e 868 SUPERFAMILY SSF53150 114 266 1.29E-29 T 13-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 COP00_01780 00a5cd74b0192f0cccb451a796b8548e 868 Gene3D G3DSA:3.40.50.300 556 859 4.5E-102 T 13-10-2018 COP00_01780 00a5cd74b0192f0cccb451a796b8548e 868 Gene3D G3DSA:3.30.420.110 124 246 3.8E-12 T 13-10-2018 IPR036678 MutS, connector domain superfamily GO:0005524|GO:0006298|GO:0030983 COP00_01780 00a5cd74b0192f0cccb451a796b8548e 868 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 4 865 0.0 T 13-10-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 COP00_01780 00a5cd74b0192f0cccb451a796b8548e 868 Gene3D G3DSA:3.40.1170.10 1 117 1.7E-49 T 13-10-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 COP00_01780 00a5cd74b0192f0cccb451a796b8548e 868 Pfam PF05192 MutS domain III 258 547 6.9E-48 T 13-10-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 COP00_01780 00a5cd74b0192f0cccb451a796b8548e 868 Pfam PF00488 MutS domain V 599 785 7.6E-85 T 13-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 COP00_01780 00a5cd74b0192f0cccb451a796b8548e 868 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 676 692 - T 13-10-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 COP00_01780 00a5cd74b0192f0cccb451a796b8548e 868 SUPERFAMILY SSF52540 555 785 9.01E-62 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_01780 00a5cd74b0192f0cccb451a796b8548e 868 PIRSF PIRSF037677 180 835 2.1E-129 T 13-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 COP00_01780 00a5cd74b0192f0cccb451a796b8548e 868 PIRSF PIRSF037677 1 189 2.0E-32 T 13-10-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 COP00_17865 beae9f9f33d6695e18ea6ce23e259ffb 389 Pfam PF07687 Peptidase dimerisation domain 170 261 8.4E-10 T 13-10-2018 IPR011650 Peptidase M20, dimerisation domain COP00_17865 beae9f9f33d6695e18ea6ce23e259ffb 389 PIRSF PIRSF037226 1 389 4.6E-173 T 13-10-2018 IPR017144 Peptidase M20A, amidohydrolase, predicted COP00_17865 beae9f9f33d6695e18ea6ce23e259ffb 389 SUPERFAMILY SSF55031 166 272 9.3E-24 T 13-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain COP00_17865 beae9f9f33d6695e18ea6ce23e259ffb 389 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 18 344 9.0E-68 T 13-10-2018 IPR017439 Amidohydrolase GO:0016787 COP00_17865 beae9f9f33d6695e18ea6ce23e259ffb 389 Gene3D G3DSA:3.30.70.360 164 281 3.7E-136 T 13-10-2018 COP00_17865 beae9f9f33d6695e18ea6ce23e259ffb 389 SUPERFAMILY SSF53187 3 375 2.86E-63 T 13-10-2018 COP00_17865 beae9f9f33d6695e18ea6ce23e259ffb 389 Gene3D G3DSA:3.40.630.10 18 361 3.7E-136 T 13-10-2018 COP00_09525 9ac00209ecf8e246bd0fe9d2c6517930 336 Gene3D G3DSA:3.40.718.10 1 330 4.4E-123 T 13-10-2018 COP00_09525 9ac00209ecf8e246bd0fe9d2c6517930 336 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 34 324 2.0E-97 T 13-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 COP00_09525 9ac00209ecf8e246bd0fe9d2c6517930 336 SUPERFAMILY SSF53659 6 330 8.96E-100 T 13-10-2018 COP00_09525 9ac00209ecf8e246bd0fe9d2c6517930 336 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 7 327 1.3E-99 T 13-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 COP00_18580 f1416c1edb0178d3f787015b4d244760 453 SUPERFAMILY SSF55021 373 449 1.26E-21 T 13-10-2018 COP00_18580 f1416c1edb0178d3f787015b4d244760 453 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 3 448 2.8E-79 T 13-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 COP00_18580 f1416c1edb0178d3f787015b4d244760 453 Pfam PF13840 ACT domain 380 444 1.9E-7 T 13-10-2018 IPR027795 CASTOR, ACT domain COP00_18580 f1416c1edb0178d3f787015b4d244760 453 Gene3D G3DSA:3.30.2130.10 289 451 2.3E-55 T 13-10-2018 COP00_18580 f1416c1edb0178d3f787015b4d244760 453 SUPERFAMILY SSF55021 296 361 1.47E-8 T 13-10-2018 COP00_18580 f1416c1edb0178d3f787015b4d244760 453 Gene3D G3DSA:3.40.1160.10 3 287 1.4E-72 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily COP00_18580 f1416c1edb0178d3f787015b4d244760 453 PIRSF PIRSF000726 1 451 2.9E-76 T 13-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 COP00_18580 f1416c1edb0178d3f787015b4d244760 453 Pfam PF00696 Amino acid kinase family 2 276 2.1E-40 T 13-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 COP00_18580 f1416c1edb0178d3f787015b4d244760 453 SUPERFAMILY SSF53633 1 289 9.56E-67 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily COP00_18580 f1416c1edb0178d3f787015b4d244760 453 ProSitePatterns PS00324 Aspartokinase signature. 3 11 - T 13-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 COP00_18580 f1416c1edb0178d3f787015b4d244760 453 Gene3D G3DSA:1.20.120.1320 39 135 1.4E-72 T 13-10-2018 COP00_11455 6092d05f7519a9f5a8d1b219cb28ba7c 283 PIRSF PIRSF001359 1 283 2.9E-111 T 13-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 COP00_11455 6092d05f7519a9f5a8d1b219cb28ba7c 283 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 282 1.3E-100 T 13-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 COP00_11455 6092d05f7519a9f5a8d1b219cb28ba7c 283 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 130 141 - T 13-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 COP00_11455 6092d05f7519a9f5a8d1b219cb28ba7c 283 SUPERFAMILY SSF51569 2 282 1.23E-98 T 13-10-2018 COP00_11455 6092d05f7519a9f5a8d1b219cb28ba7c 283 TIGRFAM TIGR01858 tag_bisphos_ald: class II aldolase, tagatose bisphosphate family 3 282 8.9E-137 T 13-10-2018 IPR011288 D-tagatose-bisphosphate aldolase, class II, subunit KbaY/GatY GO:0005975|GO:0008270|GO:0009025 KEGG: 00052+4.1.2.40|MetaCyc: PWY-7077|MetaCyc: PWY-7395 COP00_11455 6092d05f7519a9f5a8d1b219cb28ba7c 283 Pfam PF01116 Fructose-bisphosphate aldolase class-II 4 282 3.2E-100 T 13-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 COP00_11455 6092d05f7519a9f5a8d1b219cb28ba7c 283 Gene3D G3DSA:3.20.20.70 1 283 1.1E-108 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 COP00_12170 c4de4c3a9ca04c0585e66c63134ed0ed 605 Gene3D G3DSA:3.40.50.720 276 557 2.9E-116 T 13-10-2018 COP00_12170 c4de4c3a9ca04c0585e66c63134ed0ed 605 SUPERFAMILY SSF51735 138 266 3.19E-17 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily COP00_12170 c4de4c3a9ca04c0585e66c63134ed0ed 605 Gene3D G3DSA:3.40.50.720 135 260 3.6E-34 T 13-10-2018 COP00_12170 c4de4c3a9ca04c0585e66c63134ed0ed 605 Pfam PF13727 CoA-binding domain 71 234 2.3E-17 T 13-10-2018 COP00_12170 c4de4c3a9ca04c0585e66c63134ed0ed 605 SUPERFAMILY SSF51735 277 540 2.04E-56 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily COP00_12170 c4de4c3a9ca04c0585e66c63134ed0ed 605 Gene3D G3DSA:3.90.25.30 442 541 2.9E-116 T 13-10-2018 COP00_12170 c4de4c3a9ca04c0585e66c63134ed0ed 605 Pfam PF02719 Polysaccharide biosynthesis protein 279 560 1.1E-121 T 13-10-2018 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain COP00_09295 cd02f1dfc0655a2cf795c4ae866f3886 164 ProSitePatterns PS01320 Uncharacterized protein family UPF0067 signature. 98 115 - T 13-10-2018 IPR000614 Free Met sulfoxide reductase conserved site COP00_09295 cd02f1dfc0655a2cf795c4ae866f3886 164 Pfam PF13185 GAF domain 50 157 8.4E-10 T 13-10-2018 IPR003018 GAF domain GO:0005515 COP00_09295 cd02f1dfc0655a2cf795c4ae866f3886 164 SMART SM00065 31 164 0.004 T 13-10-2018 IPR003018 GAF domain GO:0005515 COP00_09295 cd02f1dfc0655a2cf795c4ae866f3886 164 SUPERFAMILY SSF55781 12 159 6.87E-43 T 13-10-2018 COP00_09295 cd02f1dfc0655a2cf795c4ae866f3886 164 Gene3D G3DSA:3.30.450.40 10 164 1.3E-64 T 13-10-2018 IPR029016 GAF-like domain superfamily COP00_18675 3c54a487e589fea3fc1aa3ea5c6baa2d 764 TIGRFAM TIGR02374 nitri_red_nirB: nitrite reductase [NAD(P)H], large subunit 6 759 4.7E-264 T 13-10-2018 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB GO:0008942|GO:0042128|GO:0050660|GO:0050661|GO:0055114 COP00_18675 3c54a487e589fea3fc1aa3ea5c6baa2d 764 Gene3D G3DSA:3.50.50.60 7 280 9.6E-91 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily COP00_18675 3c54a487e589fea3fc1aa3ea5c6baa2d 764 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 540 595 1.8E-7 T 13-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 COP00_18675 3c54a487e589fea3fc1aa3ea5c6baa2d 764 SUPERFAMILY SSF51905 147 306 1.94E-27 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily COP00_18675 3c54a487e589fea3fc1aa3ea5c6baa2d 764 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 4.0E-12 T 13-10-2018 COP00_18675 3c54a487e589fea3fc1aa3ea5c6baa2d 764 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 233 247 4.0E-12 T 13-10-2018 COP00_18675 3c54a487e589fea3fc1aa3ea5c6baa2d 764 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 147 172 4.0E-12 T 13-10-2018 COP00_18675 3c54a487e589fea3fc1aa3ea5c6baa2d 764 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 272 279 4.0E-12 T 13-10-2018 COP00_18675 3c54a487e589fea3fc1aa3ea5c6baa2d 764 SUPERFAMILY SSF51905 4 192 2.23E-44 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily COP00_18675 3c54a487e589fea3fc1aa3ea5c6baa2d 764 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 622 735 3.9E-13 T 13-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 COP00_18675 3c54a487e589fea3fc1aa3ea5c6baa2d 764 Gene3D G3DSA:3.30.413.10 611 758 1.6E-19 T 13-10-2018 COP00_18675 3c54a487e589fea3fc1aa3ea5c6baa2d 764 SUPERFAMILY SSF55124 493 590 3.6E-14 T 13-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 COP00_18675 3c54a487e589fea3fc1aa3ea5c6baa2d 764 SUPERFAMILY SSF56014 624 743 1.02E-23 T 13-10-2018 COP00_18675 3c54a487e589fea3fc1aa3ea5c6baa2d 764 PIRSF PIRSF037149 1 762 3.1E-256 T 13-10-2018 IPR017121 Nitrite reductase [NAD(P)H], large subunit GO:0042128 COP00_18675 3c54a487e589fea3fc1aa3ea5c6baa2d 764 Gene3D G3DSA:1.10.10.1100 411 465 5.5E-8 T 13-10-2018 COP00_18675 3c54a487e589fea3fc1aa3ea5c6baa2d 764 Gene3D G3DSA:3.50.50.60 110 244 9.6E-91 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily COP00_18675 3c54a487e589fea3fc1aa3ea5c6baa2d 764 Pfam PF04324 BFD-like [2Fe-2S] binding domain 476 526 4.6E-11 T 13-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain COP00_18675 3c54a487e589fea3fc1aa3ea5c6baa2d 764 Pfam PF04324 BFD-like [2Fe-2S] binding domain 411 460 1.2E-14 T 13-10-2018 IPR007419 BFD-like [2Fe-2S]-binding domain COP00_18675 3c54a487e589fea3fc1aa3ea5c6baa2d 764 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 280 1.5E-59 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 COP00_18675 3c54a487e589fea3fc1aa3ea5c6baa2d 764 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 147 165 2.6E-22 T 13-10-2018 COP00_18675 3c54a487e589fea3fc1aa3ea5c6baa2d 764 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 102 120 2.6E-22 T 13-10-2018 COP00_18675 3c54a487e589fea3fc1aa3ea5c6baa2d 764 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 257 279 2.6E-22 T 13-10-2018 COP00_18675 3c54a487e589fea3fc1aa3ea5c6baa2d 764 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 2.6E-22 T 13-10-2018 COP00_18675 3c54a487e589fea3fc1aa3ea5c6baa2d 764 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 232 248 2.6E-22 T 13-10-2018 COP00_18675 3c54a487e589fea3fc1aa3ea5c6baa2d 764 Gene3D G3DSA:3.30.390.30 316 393 9.6E-6 T 13-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 COP00_22225 7be19741c36998ee50edb056e6f23774 190 SUPERFAMILY SSF48498 82 188 1.97E-12 T 13-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily COP00_22225 7be19741c36998ee50edb056e6f23774 190 ProSitePatterns PS01081 TetR-type HTH domain signature. 21 51 - T 13-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site COP00_22225 7be19741c36998ee50edb056e6f23774 190 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 30 53 5.8E-9 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 COP00_22225 7be19741c36998ee50edb056e6f23774 190 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 9 22 5.8E-9 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 COP00_22225 7be19741c36998ee50edb056e6f23774 190 Pfam PF00440 Bacterial regulatory proteins, tetR family 9 55 2.7E-17 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 COP00_22225 7be19741c36998ee50edb056e6f23774 190 SUPERFAMILY SSF46689 4 77 3.14E-17 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 COP00_22225 7be19741c36998ee50edb056e6f23774 190 Gene3D G3DSA:1.10.357.10 2 189 8.0E-38 T 13-10-2018 COP00_17980 9cd3c1f69fd739403500562482a37601 156 Pfam PF13826 Domain of unknown function (DUF4188) 18 134 3.8E-46 T 13-10-2018 IPR025444 Monooxygenase af470-like COP00_07810 3bab1af0c115617bef0f31a7a950d970 421 Gene3D G3DSA:3.40.50.720 195 348 3.0E-81 T 13-10-2018 COP00_07810 3bab1af0c115617bef0f31a7a950d970 421 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 44 170 3.0E-55 T 13-10-2018 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 COP00_07810 3bab1af0c115617bef0f31a7a950d970 421 PIRSF PIRSF000185 9 421 1.1E-167 T 13-10-2018 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 COP00_07810 3bab1af0c115617bef0f31a7a950d970 421 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 107 120 - T 13-10-2018 IPR033524 Leu/Phe/Val dehydrogenases active site Reactome: R-HSA-2151201|Reactome: R-HSA-70614 COP00_07810 3bab1af0c115617bef0f31a7a950d970 421 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 188 419 4.0E-76 T 13-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 COP00_07810 3bab1af0c115617bef0f31a7a950d970 421 Gene3D G3DSA:3.40.50.10860 40 175 1.3E-98 T 13-10-2018 COP00_07810 3bab1af0c115617bef0f31a7a950d970 421 Gene3D G3DSA:1.10.8.1210 17 39 1.3E-98 T 13-10-2018 COP00_07810 3bab1af0c115617bef0f31a7a950d970 421 SMART SM00839 190 419 5.7E-90 T 13-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 COP00_07810 3bab1af0c115617bef0f31a7a950d970 421 Gene3D G3DSA:1.10.8.1210 373 421 1.2E-14 T 13-10-2018 COP00_07810 3bab1af0c115617bef0f31a7a950d970 421 SUPERFAMILY SSF51735 188 420 6.52E-76 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily COP00_07810 3bab1af0c115617bef0f31a7a950d970 421 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 221 241 2.5E-30 T 13-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 COP00_07810 3bab1af0c115617bef0f31a7a950d970 421 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 179 201 2.5E-30 T 13-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 COP00_07810 3bab1af0c115617bef0f31a7a950d970 421 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 347 358 2.5E-30 T 13-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 COP00_07810 3bab1af0c115617bef0f31a7a950d970 421 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 99 113 2.5E-30 T 13-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 COP00_07810 3bab1af0c115617bef0f31a7a950d970 421 SUPERFAMILY SSF53223 13 190 4.16E-67 T 13-10-2018 COP00_20635 8948ff5abf69de5491f51de790816c7f 265 Gene3D G3DSA:3.60.15.10 13 258 4.3E-43 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like COP00_20635 8948ff5abf69de5491f51de790816c7f 265 SUPERFAMILY SSF56281 18 247 5.29E-46 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like COP00_20635 8948ff5abf69de5491f51de790816c7f 265 SMART SM00849 30 239 1.2E-35 T 13-10-2018 IPR001279 Metallo-beta-lactamase COP00_20635 8948ff5abf69de5491f51de790816c7f 265 Pfam PF00753 Metallo-beta-lactamase superfamily 27 239 1.9E-37 T 13-10-2018 IPR001279 Metallo-beta-lactamase COP00_20130 c0b1c0e010d6df26692076bed4f13ed8 513 Pfam PF07732 Multicopper oxidase 99 176 8.7E-6 T 13-10-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 COP00_20130 c0b1c0e010d6df26692076bed4f13ed8 513 Pfam PF07732 Multicopper oxidase 45 80 7.4E-5 T 13-10-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 COP00_20130 c0b1c0e010d6df26692076bed4f13ed8 513 SUPERFAMILY SSF49503 364 509 1.02E-33 T 13-10-2018 IPR008972 Cupredoxin COP00_20130 c0b1c0e010d6df26692076bed4f13ed8 513 Gene3D G3DSA:2.60.40.420 174 355 3.3E-70 T 13-10-2018 IPR008972 Cupredoxin COP00_20130 c0b1c0e010d6df26692076bed4f13ed8 513 Pfam PF00394 Multicopper oxidase 246 308 9.4E-8 T 13-10-2018 IPR001117 Multicopper oxidase, type 1 GO:0055114 COP00_20130 c0b1c0e010d6df26692076bed4f13ed8 513 SUPERFAMILY SSF49503 3 177 7.05E-33 T 13-10-2018 IPR008972 Cupredoxin COP00_20130 c0b1c0e010d6df26692076bed4f13ed8 513 SUPERFAMILY SSF49503 180 307 8.43E-31 T 13-10-2018 IPR008972 Cupredoxin COP00_20130 c0b1c0e010d6df26692076bed4f13ed8 513 Gene3D G3DSA:2.60.40.420 1 172 7.3E-64 T 13-10-2018 IPR008972 Cupredoxin COP00_20130 c0b1c0e010d6df26692076bed4f13ed8 513 Pfam PF07731 Multicopper oxidase 383 508 6.7E-22 T 13-10-2018 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 COP00_20130 c0b1c0e010d6df26692076bed4f13ed8 513 Gene3D G3DSA:2.60.40.420 357 511 9.6E-52 T 13-10-2018 IPR008972 Cupredoxin COP00_05570 0398ad8e2c06aae92daa87c12de47096 267 TIGRFAM TIGR02878 spore_ypjB: sporulation protein YpjB 29 261 2.5E-87 T 13-10-2018 IPR014231 Sporulation protein YpjB COP00_05570 0398ad8e2c06aae92daa87c12de47096 267 Pfam PF09577 Sporulation protein YpjB (SpoYpjB) 29 260 1.2E-89 T 13-10-2018 IPR014231 Sporulation protein YpjB COP00_10595 cb7374f63d93ac9add71d34aed11e86e 1494 TIGRFAM TIGR03928 T7_EssCb_Firm: type VII secretion protein EssC 210 1484 0.0 T 13-10-2018 IPR023839 Firmicutes EssC, C-terminal COP00_10595 cb7374f63d93ac9add71d34aed11e86e 1494 Gene3D G3DSA:3.40.50.300 1259 1486 1.4E-18 T 13-10-2018 COP00_10595 cb7374f63d93ac9add71d34aed11e86e 1494 SUPERFAMILY SSF52540 1271 1438 1.7E-5 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_10595 cb7374f63d93ac9add71d34aed11e86e 1494 Gene3D G3DSA:3.40.50.300 959 1246 1.3E-64 T 13-10-2018 COP00_10595 cb7374f63d93ac9add71d34aed11e86e 1494 SUPERFAMILY SSF52540 979 1180 2.58E-11 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_10595 cb7374f63d93ac9add71d34aed11e86e 1494 Pfam PF12538 DNA transporter 3 122 6.8E-31 T 13-10-2018 IPR022206 Firmicutes EssC, N-terminal COP00_10595 cb7374f63d93ac9add71d34aed11e86e 1494 Gene3D G3DSA:3.40.50.300 386 612 9.7E-7 T 13-10-2018 COP00_10595 cb7374f63d93ac9add71d34aed11e86e 1494 SUPERFAMILY SSF52540 642 898 6.99E-31 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_10595 cb7374f63d93ac9add71d34aed11e86e 1494 Pfam PF01580 FtsK/SpoIIIE family 648 855 3.2E-31 T 13-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 COP00_10595 cb7374f63d93ac9add71d34aed11e86e 1494 Pfam PF01580 FtsK/SpoIIIE family 984 1174 2.3E-22 T 13-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 COP00_10595 cb7374f63d93ac9add71d34aed11e86e 1494 Gene3D G3DSA:3.40.50.300 620 947 1.7E-77 T 13-10-2018 COP00_20015 41825612793213eb178e689ea1ae9239 223 Pfam PF11738 Protein of unknown function (DUF3298) 151 219 1.6E-10 T 13-10-2018 IPR021729 Domain of unknown function DUF3298 COP00_20015 41825612793213eb178e689ea1ae9239 223 Pfam PF13739 Domain of unknown function (DUF4163) 47 126 4.9E-15 T 13-10-2018 IPR025303 Deacetylase PdaC COP00_20015 41825612793213eb178e689ea1ae9239 223 Gene3D G3DSA:3.90.640.20 143 223 1.1E-12 T 13-10-2018 IPR037126 PdaC/RsiV-like superfamily COP00_20015 41825612793213eb178e689ea1ae9239 223 Gene3D G3DSA:3.30.565.40 38 142 4.2E-21 T 13-10-2018 COP00_06630 f5079aed4805d8ba52fc9a79ac505c23 230 TIGRFAM TIGR02830 spore_III_AG: stage III sporulation protein AG 28 225 7.3E-69 T 13-10-2018 IPR014195 Sporulation stage III, protein AG COP00_12935 ca42dd712e0eeb7830c0388ad9d93f35 1352 SUPERFAMILY SSF56300 915 1177 7.15E-33 T 13-10-2018 COP00_12935 ca42dd712e0eeb7830c0388ad9d93f35 1352 Gene3D G3DSA:3.60.21.10 918 1135 1.2E-16 T 13-10-2018 IPR029052 Metallo-dependent phosphatase-like COP00_12935 ca42dd712e0eeb7830c0388ad9d93f35 1352 Pfam PF00149 Calcineurin-like phosphoesterase 919 1114 9.9E-13 T 13-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 COP00_12935 ca42dd712e0eeb7830c0388ad9d93f35 1352 Pfam PF00932 Lamin Tail Domain 141 235 1.5E-9 T 13-10-2018 IPR001322 Lamin tail domain COP00_14130 529edf6d8782b5af17f12dd0d52ae140 63 Gene3D G3DSA:3.30.429.10 2 62 7.2E-23 T 13-10-2018 IPR014347 Tautomerase/MIF superfamily COP00_14130 529edf6d8782b5af17f12dd0d52ae140 63 Pfam PF01361 Tautomerase enzyme 2 58 3.0E-17 T 13-10-2018 IPR004370 4-oxalocrotonate tautomerase GO:0006725|GO:0016853 COP00_14130 529edf6d8782b5af17f12dd0d52ae140 63 TIGRFAM TIGR00013 taut: 4-oxalocrotonate tautomerase family enzyme 2 61 4.9E-19 T 13-10-2018 IPR018191 4-oxalocrotonate tautomerase, Pseudomonas-type GO:0006725|GO:0016853 COP00_14130 529edf6d8782b5af17f12dd0d52ae140 63 SUPERFAMILY SSF55331 2 60 6.15E-18 T 13-10-2018 IPR014347 Tautomerase/MIF superfamily COP00_11640 ff79a40aa8c4fbc4414fc6db3893c7c3 278 Pfam PF05709 Phage tail protein 27 277 4.4E-41 T 13-10-2018 IPR008841 Siphovirus-type tail component COP00_19750 ff79a40aa8c4fbc4414fc6db3893c7c3 278 Pfam PF05709 Phage tail protein 27 277 4.4E-41 T 13-10-2018 IPR008841 Siphovirus-type tail component COP00_13945 fabfbe28b90a61c57d0829cf4ec2f53e 194 Gene3D G3DSA:3.30.60.20 142 193 1.4E-26 T 13-10-2018 COP00_13945 fabfbe28b90a61c57d0829cf4ec2f53e 194 SUPERFAMILY SSF57716 142 192 5.13E-16 T 13-10-2018 COP00_13945 fabfbe28b90a61c57d0829cf4ec2f53e 194 Pfam PF00265 Thymidine kinase 8 187 2.8E-58 T 13-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 COP00_13945 fabfbe28b90a61c57d0829cf4ec2f53e 194 Hamap MF_00124 Thymidine kinase [tdk]. 7 190 37.406 T 13-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 COP00_13945 fabfbe28b90a61c57d0829cf4ec2f53e 194 Gene3D G3DSA:3.40.50.300 1 141 4.3E-59 T 13-10-2018 COP00_13945 fabfbe28b90a61c57d0829cf4ec2f53e 194 SUPERFAMILY SSF52540 8 142 5.67E-43 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_13945 fabfbe28b90a61c57d0829cf4ec2f53e 194 PIRSF PIRSF035805 5 194 1.4E-65 T 13-10-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 COP00_13945 fabfbe28b90a61c57d0829cf4ec2f53e 194 ProSitePatterns PS00603 Thymidine kinase cellular-type signature. 174 187 - T 13-10-2018 IPR020633 Thymidine kinase, conserved site GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 COP00_20785 588c00b497a5af45324e0044d8f9b706 109 Pfam PF00893 Small Multidrug Resistance protein 2 93 6.2E-28 T 13-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 COP00_20785 588c00b497a5af45324e0044d8f9b706 109 SUPERFAMILY SSF103481 4 105 5.62E-19 T 13-10-2018 COP00_20785 588c00b497a5af45324e0044d8f9b706 109 Gene3D G3DSA:1.10.3730.20 1 107 8.8E-36 T 13-10-2018 COP00_12225 3a0422106fe918f9a22f0eef3f6d758a 572 Pfam PF06506 Propionate catabolism activator 23 184 1.6E-56 T 13-10-2018 IPR010524 Signal transduction response regulator, propionate catabolism activator, N-terminal GO:0000156|GO:0000160|GO:0003677|GO:0005524 COP00_12225 3a0422106fe918f9a22f0eef3f6d758a 572 Gene3D G3DSA:3.40.50.2300 3 179 2.1E-62 T 13-10-2018 COP00_12225 3a0422106fe918f9a22f0eef3f6d758a 572 Gene3D G3DSA:1.10.10.60 510 572 4.2E-16 T 13-10-2018 COP00_12225 3a0422106fe918f9a22f0eef3f6d758a 572 SUPERFAMILY SSF52540 303 512 2.58E-25 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_12225 3a0422106fe918f9a22f0eef3f6d758a 572 SUPERFAMILY SSF159800 1 182 6.67E-55 T 13-10-2018 COP00_12225 3a0422106fe918f9a22f0eef3f6d758a 572 Gene3D G3DSA:3.40.50.300 301 441 1.4E-25 T 13-10-2018 COP00_12225 3a0422106fe918f9a22f0eef3f6d758a 572 Pfam PF14532 Sigma-54 interaction domain 305 440 9.4E-15 T 13-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 COP00_12225 3a0422106fe918f9a22f0eef3f6d758a 572 SUPERFAMILY SSF46689 522 569 3.94E-10 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 COP00_12225 3a0422106fe918f9a22f0eef3f6d758a 572 Pfam PF02954 Bacterial regulatory protein, Fis family 530 569 1.8E-12 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 COP00_12225 3a0422106fe918f9a22f0eef3f6d758a 572 Gene3D G3DSA:3.40.50.10660 75 164 2.1E-62 T 13-10-2018 COP00_12225 3a0422106fe918f9a22f0eef3f6d758a 572 Gene3D G3DSA:1.10.8.60 442 509 6.7E-14 T 13-10-2018 COP00_14025 088e17f5997ef0d634ccbfd54f7e2d82 704 Pfam PF13183 4Fe-4S dicluster domain 274 383 2.4E-12 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain COP00_14025 088e17f5997ef0d634ccbfd54f7e2d82 704 Pfam PF02754 Cysteine-rich domain 459 540 7.4E-6 T 13-10-2018 IPR004017 Cysteine-rich domain COP00_14025 088e17f5997ef0d634ccbfd54f7e2d82 704 Pfam PF02754 Cysteine-rich domain 581 668 3.7E-16 T 13-10-2018 IPR004017 Cysteine-rich domain COP00_14025 088e17f5997ef0d634ccbfd54f7e2d82 704 SUPERFAMILY SSF46548 259 399 3.49E-19 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 COP00_14025 088e17f5997ef0d634ccbfd54f7e2d82 704 SUPERFAMILY SSF103501 8 238 7.19E-17 T 13-10-2018 IPR036197 NarG-like superfamily COP00_14025 088e17f5997ef0d634ccbfd54f7e2d82 704 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 371 382 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site COP00_11330 ba382ee6faaa15e3bae1b20831971b31 281 SUPERFAMILY SSF51430 7 273 5.63E-99 T 13-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily COP00_11330 ba382ee6faaa15e3bae1b20831971b31 281 ProSitePatterns PS00063 Aldo/keto reductase family putative active site signature. 232 247 - T 13-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 COP00_11330 ba382ee6faaa15e3bae1b20831971b31 281 Gene3D G3DSA:3.20.20.100 1 278 1.5E-129 T 13-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily COP00_11330 ba382ee6faaa15e3bae1b20831971b31 281 PRINTS PR00069 Aldo-keto reductase signature 96 114 2.9E-52 T 13-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 COP00_11330 ba382ee6faaa15e3bae1b20831971b31 281 PRINTS PR00069 Aldo-keto reductase signature 128 145 2.9E-52 T 13-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 COP00_11330 ba382ee6faaa15e3bae1b20831971b31 281 PRINTS PR00069 Aldo-keto reductase signature 162 191 2.9E-52 T 13-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 COP00_11330 ba382ee6faaa15e3bae1b20831971b31 281 PRINTS PR00069 Aldo-keto reductase signature 199 223 2.9E-52 T 13-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 COP00_11330 ba382ee6faaa15e3bae1b20831971b31 281 PRINTS PR00069 Aldo-keto reductase signature 40 64 2.9E-52 T 13-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 COP00_11330 ba382ee6faaa15e3bae1b20831971b31 281 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 128 145 - T 13-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 COP00_11330 ba382ee6faaa15e3bae1b20831971b31 281 Pfam PF00248 Aldo/keto reductase family 31 264 1.5E-55 T 13-10-2018 IPR023210 NADP-dependent oxidoreductase domain COP00_11330 ba382ee6faaa15e3bae1b20831971b31 281 PIRSF PIRSF000097 2 281 4.6E-95 T 13-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 COP00_11330 ba382ee6faaa15e3bae1b20831971b31 281 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 44 61 - T 13-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 COP00_17145 2ee9cdf8bc29e9be43a8969bfa0e03a5 199 SUPERFAMILY SSF52833 1 197 3.52E-37 T 13-10-2018 IPR036249 Thioredoxin-like superfamily COP00_17145 2ee9cdf8bc29e9be43a8969bfa0e03a5 199 Gene3D G3DSA:3.40.30.10 1 196 1.1E-45 T 13-10-2018 COP00_17145 2ee9cdf8bc29e9be43a8969bfa0e03a5 199 Pfam PF01323 DSBA-like thioredoxin domain 4 193 9.9E-35 T 13-10-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590|Reactome: R-HSA-9033241 COP00_10660 6138b94d0f0b8fd406de039f40a5bfa9 403 Gene3D G3DSA:3.50.50.100 1 403 6.5E-146 T 13-10-2018 COP00_10660 6138b94d0f0b8fd406de039f40a5bfa9 403 SUPERFAMILY SSF51905 3 209 5.76E-30 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily COP00_10660 6138b94d0f0b8fd406de039f40a5bfa9 403 SUPERFAMILY SSF51905 149 338 1.87E-25 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily COP00_10660 6138b94d0f0b8fd406de039f40a5bfa9 403 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 324 1.2E-47 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 COP00_10660 6138b94d0f0b8fd406de039f40a5bfa9 403 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 158 176 3.9E-7 T 13-10-2018 COP00_10660 6138b94d0f0b8fd406de039f40a5bfa9 403 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 100 118 3.9E-7 T 13-10-2018 COP00_10660 6138b94d0f0b8fd406de039f40a5bfa9 403 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 3.9E-7 T 13-10-2018 COP00_18660 042177b958b0b34b2c5480e7e4a6dc6d 210 Gene3D G3DSA:2.60.40.2230 22 171 1.1E-35 T 13-10-2018 IPR038507 YcnI-like superfamily COP00_18660 042177b958b0b34b2c5480e7e4a6dc6d 210 Pfam PF07987 Domain of unkown function (DUF1775) 25 142 8.6E-20 T 13-10-2018 IPR012533 YcnI-like COP00_00340 c56bb207c6c18f770902ed905de63116 150 PRINTS PR00369 Flavodoxin signature 106 125 4.0E-7 T 13-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 COP00_00340 c56bb207c6c18f770902ed905de63116 150 PRINTS PR00369 Flavodoxin signature 5 18 4.0E-7 T 13-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 COP00_00340 c56bb207c6c18f770902ed905de63116 150 PRINTS PR00369 Flavodoxin signature 53 64 4.0E-7 T 13-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 COP00_00340 c56bb207c6c18f770902ed905de63116 150 PRINTS PR00369 Flavodoxin signature 82 92 4.0E-7 T 13-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 COP00_00340 c56bb207c6c18f770902ed905de63116 150 TIGRFAM TIGR01753 flav_short: flavodoxin 4 143 2.9E-48 T 13-10-2018 IPR010087 Flavodoxin, short chain GO:0010181 COP00_00340 c56bb207c6c18f770902ed905de63116 150 Pfam PF00258 Flavodoxin 6 134 3.9E-32 T 13-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 COP00_00340 c56bb207c6c18f770902ed905de63116 150 Gene3D G3DSA:3.40.50.360 1 142 1.1E-38 T 13-10-2018 IPR029039 Flavoprotein-like superfamily COP00_00340 c56bb207c6c18f770902ed905de63116 150 SUPERFAMILY SSF52218 3 143 4.72E-40 T 13-10-2018 IPR029039 Flavoprotein-like superfamily COP00_00340 c56bb207c6c18f770902ed905de63116 150 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 13-10-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 COP00_14135 44385eaeec6be9c241dcece1852d78fe 261 SUPERFAMILY SSF56529 1 259 3.27E-74 T 13-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 COP00_14135 44385eaeec6be9c241dcece1852d78fe 261 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 97 259 1.1E-12 T 13-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 COP00_14135 44385eaeec6be9c241dcece1852d78fe 261 Gene3D G3DSA:3.90.850.10 1 259 1.2E-82 T 13-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 COP00_13365 3e0210a366bae959c674cb9f26fd8ea8 286 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 3 250 3.5E-28 T 13-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 COP00_13365 3e0210a366bae959c674cb9f26fd8ea8 286 Gene3D G3DSA:3.30.1240.10 79 206 2.9E-78 T 13-10-2018 COP00_13365 3e0210a366bae959c674cb9f26fd8ea8 286 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 3 277 1.2E-52 T 13-10-2018 IPR000150 Cof family GO:0016787 COP00_13365 3e0210a366bae959c674cb9f26fd8ea8 286 Pfam PF08282 haloacid dehalogenase-like hydrolase 4 277 6.7E-62 T 13-10-2018 COP00_13365 3e0210a366bae959c674cb9f26fd8ea8 286 SUPERFAMILY SSF56784 2 281 2.62E-63 T 13-10-2018 IPR036412 HAD-like superfamily COP00_13365 3e0210a366bae959c674cb9f26fd8ea8 286 ProSitePatterns PS01228 Hypothetical cof family signature 1. 3 14 - T 13-10-2018 COP00_13365 3e0210a366bae959c674cb9f26fd8ea8 286 Gene3D G3DSA:3.40.50.1000 2 274 2.9E-78 T 13-10-2018 IPR023214 HAD superfamily COP00_17375 e33d7062b683d5a1d34c54e63cfa879b 149 Gene3D G3DSA:3.20.80.10 1 149 1.2E-33 T 13-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily COP00_17375 e33d7062b683d5a1d34c54e63cfa879b 149 Pfam PF06445 GyrI-like small molecule binding domain 2 148 3.1E-28 T 13-10-2018 IPR029442 GyrI-like small molecule binding domain COP00_17375 e33d7062b683d5a1d34c54e63cfa879b 149 SMART SM00871 1 149 6.2E-29 T 13-10-2018 IPR010499 Bacterial transcription activator, effector binding COP00_17375 e33d7062b683d5a1d34c54e63cfa879b 149 SUPERFAMILY SSF55136 2 149 5.23E-30 T 13-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily COP00_17400 e33d7062b683d5a1d34c54e63cfa879b 149 Gene3D G3DSA:3.20.80.10 1 149 1.2E-33 T 13-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily COP00_17400 e33d7062b683d5a1d34c54e63cfa879b 149 Pfam PF06445 GyrI-like small molecule binding domain 2 148 3.1E-28 T 13-10-2018 IPR029442 GyrI-like small molecule binding domain COP00_17400 e33d7062b683d5a1d34c54e63cfa879b 149 SMART SM00871 1 149 6.2E-29 T 13-10-2018 IPR010499 Bacterial transcription activator, effector binding COP00_17400 e33d7062b683d5a1d34c54e63cfa879b 149 SUPERFAMILY SSF55136 2 149 5.23E-30 T 13-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily COP00_22895 d84759c559891e92cda9e0cad9a63020 677 Gene3D G3DSA:1.10.1370.20 306 677 5.4E-145 T 13-10-2018 COP00_22895 d84759c559891e92cda9e0cad9a63020 677 Pfam PF08439 Oligopeptidase F 192 261 2.2E-24 T 13-10-2018 IPR013647 Oligopeptidase F, N-terminal domain COP00_22895 d84759c559891e92cda9e0cad9a63020 677 Pfam PF01432 Peptidase family M3 282 661 2.8E-84 T 13-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 COP00_22895 d84759c559891e92cda9e0cad9a63020 677 SUPERFAMILY SSF55486 133 675 3.59E-141 T 13-10-2018 COP00_22895 d84759c559891e92cda9e0cad9a63020 677 TIGRFAM TIGR00181 pepF: oligoendopeptidase F 85 673 1.0E-229 T 13-10-2018 IPR004438 Peptidase M3B, oligoendopeptidase F GO:0004222|GO:0006508 COP00_22895 d84759c559891e92cda9e0cad9a63020 677 Gene3D G3DSA:1.20.140.70 102 257 1.9E-56 T 13-10-2018 COP00_22895 d84759c559891e92cda9e0cad9a63020 677 Gene3D G3DSA:1.10.287.830 259 305 6.0E-21 T 13-10-2018 COP00_01545 59a66475a840b874f373553739bde7c7 1438 SUPERFAMILY SSF50249 235 322 3.43E-11 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold COP00_01545 59a66475a840b874f373553739bde7c7 1438 Gene3D G3DSA:2.40.50.140 220 321 1.1E-32 T 13-10-2018 COP00_01545 59a66475a840b874f373553739bde7c7 1438 Pfam PF14480 DNA polymerase III polC-type N-terminus I 11 83 9.1E-22 T 13-10-2018 IPR028112 DNA polymerase III polC-type, N-terminal domain I KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 COP00_01545 59a66475a840b874f373553739bde7c7 1438 Gene3D G3DSA:3.30.420.10 413 557 1.1E-45 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 COP00_01545 59a66475a840b874f373553739bde7c7 1438 SMART SM00479 421 588 1.8E-60 T 13-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III COP00_01545 59a66475a840b874f373553739bde7c7 1438 Gene3D G3DSA:1.10.100.20 996 1043 2.1E-59 T 13-10-2018 COP00_01545 59a66475a840b874f373553739bde7c7 1438 Gene3D G3DSA:3.30.1900.20 974 1096 2.1E-59 T 13-10-2018 COP00_01545 59a66475a840b874f373553739bde7c7 1438 Pfam PF11490 DNA polymerase III polC-type N-terminus II 97 208 4.7E-27 T 13-10-2018 IPR024754 DNA polymerase III polC-like, N-terminal domain II KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 COP00_01545 59a66475a840b874f373553739bde7c7 1438 Gene3D G3DSA:3.20.20.140 558 803 1.4E-60 T 13-10-2018 COP00_01545 59a66475a840b874f373553739bde7c7 1438 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 414 638 1.5E-79 T 13-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 COP00_01545 59a66475a840b874f373553739bde7c7 1438 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 826 1236 1.3E-98 T 13-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 COP00_01545 59a66475a840b874f373553739bde7c7 1438 SMART SM00481 336 403 2.0E-27 T 13-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal COP00_01545 59a66475a840b874f373553739bde7c7 1438 Pfam PF02811 PHP domain 337 696 2.2E-55 T 13-10-2018 IPR004013 PHP domain GO:0003824 COP00_01545 59a66475a840b874f373553739bde7c7 1438 Gene3D G3DSA:1.10.150.870 1288 1424 4.7E-54 T 13-10-2018 COP00_01545 59a66475a840b874f373553739bde7c7 1438 Hamap MF_00356 DNA polymerase III PolC-type [polC]. 1 1438 463.614 T 13-10-2018 IPR006308 DNA polymerase III, alpha subunit, Gram-positive type GO:0003677|GO:0003887|GO:0005737|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 COP00_01545 59a66475a840b874f373553739bde7c7 1438 Pfam PF00929 Exonuclease 423 578 4.3E-45 T 13-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III COP00_01545 59a66475a840b874f373553739bde7c7 1438 SUPERFAMILY SSF53098 421 877 4.4E-108 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily COP00_01545 59a66475a840b874f373553739bde7c7 1438 Gene3D G3DSA:1.10.150.700 1236 1287 1.2E-14 T 13-10-2018 COP00_01545 59a66475a840b874f373553739bde7c7 1438 Gene3D G3DSA:1.10.150.700 1097 1185 6.6E-36 T 13-10-2018 COP00_01545 59a66475a840b874f373553739bde7c7 1438 Pfam PF14579 Helix-hairpin-helix motif 1353 1431 2.0E-9 T 13-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 COP00_01545 59a66475a840b874f373553739bde7c7 1438 TIGRFAM TIGR01405 polC_Gram_pos: DNA polymerase III, alpha subunit, Gram-positive type 231 1438 0.0 T 13-10-2018 IPR006308 DNA polymerase III, alpha subunit, Gram-positive type GO:0003677|GO:0003887|GO:0005737|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 COP00_16015 13ea24d3b703b683a6f327ce37837951 196 ProSitePatterns PS01236 PdxT/SNO family family signature. 41 51 - T 13-10-2018 IPR021196 PdxT/SNO family, conserved site KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 COP00_16015 13ea24d3b703b683a6f327ce37837951 196 TIGRFAM TIGR03800 PLP_synth_Pdx2: pyridoxal 5'-phosphate synthase, glutaminase subunit Pdx2 4 185 5.1E-82 T 13-10-2018 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO GO:0004359|GO:0042819|GO:0042823 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 COP00_16015 13ea24d3b703b683a6f327ce37837951 196 SUPERFAMILY SSF52317 3 187 4.49E-53 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like COP00_16015 13ea24d3b703b683a6f327ce37837951 196 Gene3D G3DSA:3.40.50.880 1 195 4.2E-70 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like COP00_16015 13ea24d3b703b683a6f327ce37837951 196 PIRSF PIRSF005639 1 191 3.4E-72 T 13-10-2018 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO GO:0004359|GO:0042819|GO:0042823 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 COP00_16015 13ea24d3b703b683a6f327ce37837951 196 Hamap MF_01615 Pyridoxal 5'-phosphate synthase subunit PdxT [pdxT]. 4 186 36.818 T 13-10-2018 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO GO:0004359|GO:0042819|GO:0042823 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 COP00_16015 13ea24d3b703b683a6f327ce37837951 196 Pfam PF01174 SNO glutamine amidotransferase family 6 188 1.7E-78 T 13-10-2018 IPR002161 Pyridoxal 5'-phosphate synthase subunit PdxT/SNO GO:0004359|GO:0042819|GO:0042823 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 COP00_14785 089be373b79afbc5f6371ff2d1ff33eb 115 SUPERFAMILY SSF47413 4 67 5.63E-15 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 COP00_14785 089be373b79afbc5f6371ff2d1ff33eb 115 SMART SM00530 5 60 2.8E-14 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 COP00_14785 089be373b79afbc5f6371ff2d1ff33eb 115 Pfam PF01381 Helix-turn-helix 9 60 2.2E-15 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 COP00_14785 089be373b79afbc5f6371ff2d1ff33eb 115 Gene3D G3DSA:1.10.260.40 4 114 3.7E-20 T 13-10-2018 COP00_15420 0564b138071eeeb359a0ca3060ce3262 425 SUPERFAMILY SSF51445 49 418 8.39E-114 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily COP00_15420 0564b138071eeeb359a0ca3060ce3262 425 Pfam PF07745 Glycosyl hydrolase family 53 52 415 6.7E-140 T 13-10-2018 IPR011683 Glycosyl hydrolase family 53 GO:0015926 COP00_15420 0564b138071eeeb359a0ca3060ce3262 425 Gene3D G3DSA:3.20.20.80 30 425 5.2E-171 T 13-10-2018 COP00_00910 ba8a83e5c8e05e24d5817cb536a21369 239 Pfam PF04542 Sigma-70 region 2 62 131 1.8E-18 T 13-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 COP00_00910 ba8a83e5c8e05e24d5817cb536a21369 239 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 86 99 - T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 COP00_00910 ba8a83e5c8e05e24d5817cb536a21369 239 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 205 231 - T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 COP00_00910 ba8a83e5c8e05e24d5817cb536a21369 239 PIRSF PIRSF000770 1 239 5.4E-81 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 COP00_00910 ba8a83e5c8e05e24d5817cb536a21369 239 SUPERFAMILY SSF88946 25 131 3.14E-35 T 13-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 COP00_00910 ba8a83e5c8e05e24d5817cb536a21369 239 Pfam PF04545 Sigma-70, region 4 180 233 2.0E-17 T 13-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 COP00_00910 ba8a83e5c8e05e24d5817cb536a21369 239 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 58 234 1.7E-36 T 13-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 COP00_00910 ba8a83e5c8e05e24d5817cb536a21369 239 SUPERFAMILY SSF88659 143 237 5.79E-22 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like COP00_00910 ba8a83e5c8e05e24d5817cb536a21369 239 Gene3D G3DSA:1.20.120.1810 29 131 2.2E-25 T 13-10-2018 COP00_00910 ba8a83e5c8e05e24d5817cb536a21369 239 Gene3D G3DSA:1.10.10.10 167 239 1.9E-14 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_00910 ba8a83e5c8e05e24d5817cb536a21369 239 PRINTS PR00046 Major sigma-70 factor signature 86 99 7.1E-12 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 COP00_00910 ba8a83e5c8e05e24d5817cb536a21369 239 PRINTS PR00046 Major sigma-70 factor signature 184 196 7.1E-12 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 COP00_00910 ba8a83e5c8e05e24d5817cb536a21369 239 PRINTS PR00046 Major sigma-70 factor signature 220 231 7.1E-12 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 COP00_00910 ba8a83e5c8e05e24d5817cb536a21369 239 PRINTS PR00046 Major sigma-70 factor signature 205 220 7.1E-12 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 COP00_00910 ba8a83e5c8e05e24d5817cb536a21369 239 TIGRFAM TIGR02835 spore_sigmaE: RNA polymerase sigma-E factor 8 239 3.2E-135 T 13-10-2018 IPR014200 RNA polymerase sigma-E type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 COP00_23905 985c0776190c55e25de9141866f25b90 568 SUPERFAMILY SSF52151 7 300 1.12E-33 T 13-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase COP00_23905 985c0776190c55e25de9141866f25b90 568 Pfam PF01734 Patatin-like phospholipase 12 271 1.6E-15 T 13-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 COP00_23905 985c0776190c55e25de9141866f25b90 568 Gene3D G3DSA:3.40.1090.10 2 339 3.9E-20 T 13-10-2018 COP00_12785 6bf07d801447b2bce0d1f96d9221cd68 259 Gene3D G3DSA:3.40.50.300 1 252 7.5E-67 T 13-10-2018 COP00_12785 6bf07d801447b2bce0d1f96d9221cd68 259 Pfam PF00005 ABC transporter 25 173 5.7E-31 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 COP00_12785 6bf07d801447b2bce0d1f96d9221cd68 259 SMART SM00382 34 222 3.0E-14 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_12785 6bf07d801447b2bce0d1f96d9221cd68 259 SUPERFAMILY SSF52540 3 226 9.61E-66 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_14390 aaf07bc78710ccb1eb6fe5165bd63a8c 499 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 132 144 - T 13-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 COP00_14390 aaf07bc78710ccb1eb6fe5165bd63a8c 499 Gene3D G3DSA:3.30.420.40 4 248 2.2E-83 T 13-10-2018 COP00_14390 aaf07bc78710ccb1eb6fe5165bd63a8c 499 TIGRFAM TIGR01312 XylB: xylulokinase 5 484 3.2E-186 T 13-10-2018 IPR006000 Xylulokinase GO:0004856|GO:0005997 KEGG: 00040+2.7.1.17 COP00_14390 aaf07bc78710ccb1eb6fe5165bd63a8c 499 SUPERFAMILY SSF53067 3 249 6.26E-78 T 13-10-2018 COP00_14390 aaf07bc78710ccb1eb6fe5165bd63a8c 499 PIRSF PIRSF000538 1 495 2.5E-163 T 13-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 COP00_14390 aaf07bc78710ccb1eb6fe5165bd63a8c 499 SUPERFAMILY SSF53067 249 490 5.44E-69 T 13-10-2018 COP00_14390 aaf07bc78710ccb1eb6fe5165bd63a8c 499 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 355 375 - T 13-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 COP00_14390 aaf07bc78710ccb1eb6fe5165bd63a8c 499 Gene3D G3DSA:3.30.420.40 249 491 1.0E-78 T 13-10-2018 COP00_14390 aaf07bc78710ccb1eb6fe5165bd63a8c 499 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 256 442 2.7E-34 T 13-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 COP00_14390 aaf07bc78710ccb1eb6fe5165bd63a8c 499 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 3 247 1.8E-68 T 13-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 COP00_07450 d2c6d79cba5ae59f29f58166351adec7 980 SMART SM00926 263 317 6.8E-18 T 13-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 COP00_07450 d2c6d79cba5ae59f29f58166351adec7 980 Gene3D G3DSA:3.40.228.10 398 597 1.9E-163 T 13-10-2018 COP00_07450 d2c6d79cba5ae59f29f58166351adec7 980 SUPERFAMILY SSF54862 79 217 1.17E-31 T 13-10-2018 COP00_07450 d2c6d79cba5ae59f29f58166351adec7 980 Pfam PF01568 Molydopterin dinucleotide binding domain 826 933 9.9E-21 T 13-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 COP00_07450 d2c6d79cba5ae59f29f58166351adec7 980 Gene3D G3DSA:3.10.20.740 7 127 7.7E-29 T 13-10-2018 COP00_07450 d2c6d79cba5ae59f29f58166351adec7 980 Gene3D G3DSA:3.30.70.20 131 214 2.1E-21 T 13-10-2018 COP00_07450 d2c6d79cba5ae59f29f58166351adec7 980 Pfam PF12838 4Fe-4S dicluster domain 152 210 7.9E-7 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain COP00_07450 d2c6d79cba5ae59f29f58166351adec7 980 SUPERFAMILY SSF54292 7 75 8.49E-14 T 13-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 COP00_07450 d2c6d79cba5ae59f29f58166351adec7 980 PIRSF PIRSF036643 2 970 0.0 T 13-10-2018 COP00_07450 d2c6d79cba5ae59f29f58166351adec7 980 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 196 207 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site COP00_07450 d2c6d79cba5ae59f29f58166351adec7 980 SUPERFAMILY SSF50692 792 938 9.72E-36 T 13-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily COP00_07450 d2c6d79cba5ae59f29f58166351adec7 980 TIGRFAM TIGR01591 Fdh-alpha: formate dehydrogenase, alpha subunit 268 936 2.7E-247 T 13-10-2018 IPR006478 Formate dehydrogenase, alpha subunit GO:0008863|GO:0015942|GO:0055114 KEGG: 00630+1.17.1.9|KEGG: 00680+1.17.1.9|MetaCyc: PWY-1881|MetaCyc: PWY-5497|MetaCyc: PWY-6696|MetaCyc: PWY-7985 COP00_07450 d2c6d79cba5ae59f29f58166351adec7 980 Gene3D G3DSA:3.40.50.740 325 779 1.9E-163 T 13-10-2018 COP00_07450 d2c6d79cba5ae59f29f58166351adec7 980 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 5 78 3.2E-12 T 13-10-2018 COP00_07450 d2c6d79cba5ae59f29f58166351adec7 980 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 264 317 4.2E-18 T 13-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 COP00_07450 d2c6d79cba5ae59f29f58166351adec7 980 Gene3D G3DSA:2.20.25.90 263 318 1.0E-18 T 13-10-2018 COP00_07450 d2c6d79cba5ae59f29f58166351adec7 980 Gene3D G3DSA:2.40.40.20 816 942 7.2E-28 T 13-10-2018 COP00_07450 d2c6d79cba5ae59f29f58166351adec7 980 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 86 125 6.1E-13 T 13-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 COP00_07450 d2c6d79cba5ae59f29f58166351adec7 980 Pfam PF00384 Molybdopterin oxidoreductase 320 743 3.2E-86 T 13-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 COP00_07450 d2c6d79cba5ae59f29f58166351adec7 980 SMART SM00929 86 127 8.5E-16 T 13-10-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 COP00_07450 d2c6d79cba5ae59f29f58166351adec7 980 SUPERFAMILY SSF53706 257 783 3.4E-193 T 13-10-2018 COP00_07220 07b9e2f1353df93d32a545cb24915ae4 301 SUPERFAMILY SSF54814 182 297 1.77E-43 T 13-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 COP00_07220 07b9e2f1353df93d32a545cb24915ae4 301 Pfam PF07650 KH domain 208 285 4.5E-22 T 13-10-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 COP00_07220 07b9e2f1353df93d32a545cb24915ae4 301 Hamap MF_00367 GTPase Era [era]. 6 296 39.023 T 13-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_07220 07b9e2f1353df93d32a545cb24915ae4 301 TIGRFAM TIGR00436 era: GTP-binding protein Era 9 279 5.1E-115 T 13-10-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_07220 07b9e2f1353df93d32a545cb24915ae4 301 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 102 5.3E-5 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 COP00_07220 07b9e2f1353df93d32a545cb24915ae4 301 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 11 31 5.3E-5 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 COP00_07220 07b9e2f1353df93d32a545cb24915ae4 301 Gene3D G3DSA:3.40.50.300 3 185 3.0E-48 T 13-10-2018 COP00_07220 07b9e2f1353df93d32a545cb24915ae4 301 Gene3D G3DSA:3.30.300.20 186 300 3.3E-44 T 13-10-2018 IPR015946 K homology domain-like, alpha/beta COP00_07220 07b9e2f1353df93d32a545cb24915ae4 301 Pfam PF01926 50S ribosome-binding GTPase 11 125 4.1E-24 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 COP00_07220 07b9e2f1353df93d32a545cb24915ae4 301 SUPERFAMILY SSF52540 11 206 1.0E-48 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_07220 07b9e2f1353df93d32a545cb24915ae4 301 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 9 169 2.1E-28 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 COP00_00135 67088830ddd13f5611982ac082a8789a 163 Pfam PF00583 Acetyltransferase (GNAT) family 37 118 1.9E-10 T 13-10-2018 IPR000182 GNAT domain COP00_00135 67088830ddd13f5611982ac082a8789a 163 Gene3D G3DSA:3.40.630.30 33 162 3.8E-20 T 13-10-2018 COP00_00135 67088830ddd13f5611982ac082a8789a 163 SUPERFAMILY SSF55729 16 123 2.66E-14 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase COP00_22830 9f0a8bf8d7102eb924968a6c8a70f9c1 250 Pfam PF12227 Protein of unknown function (DUF3603) 35 250 4.5E-110 T 13-10-2018 IPR020909 UPF0736 COP00_22830 9f0a8bf8d7102eb924968a6c8a70f9c1 250 Hamap MF_01860 UPF0736 protein . 1 250 49.52 T 13-10-2018 IPR020909 UPF0736 COP00_09235 e4dfa3a113e9e9c3a16951452f294d2e 335 Gene3D G3DSA:3.90.226.10 61 276 7.2E-90 T 13-10-2018 COP00_09235 e4dfa3a113e9e9c3a16951452f294d2e 335 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 59 280 1.0E-87 T 13-10-2018 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 COP00_09235 e4dfa3a113e9e9c3a16951452f294d2e 335 SUPERFAMILY SSF52096 55 268 1.39E-42 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily COP00_09235 e4dfa3a113e9e9c3a16951452f294d2e 335 Gene3D G3DSA:3.40.1750.20 171 237 7.2E-90 T 13-10-2018 COP00_09235 e4dfa3a113e9e9c3a16951452f294d2e 335 Pfam PF01343 Peptidase family S49 130 279 5.0E-60 T 13-10-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 COP00_17565 f9ea27b8557a27a4c231cbc6a9867851 120 Pfam PF09391 Protein of unknown function (DUF2000) 4 107 1.9E-31 T 13-10-2018 IPR018988 Protein of unknown function DUF2000 COP00_17565 f9ea27b8557a27a4c231cbc6a9867851 120 Gene3D G3DSA:3.40.1490.10 2 113 2.4E-7 T 13-10-2018 IPR023476 Peptidyl-tRNA hydrolase II domain superfamily MetaCyc: PWY-6308 COP00_17565 f9ea27b8557a27a4c231cbc6a9867851 120 SUPERFAMILY SSF102462 2 109 3.24E-29 T 13-10-2018 IPR023476 Peptidyl-tRNA hydrolase II domain superfamily MetaCyc: PWY-6308 COP00_17565 f9ea27b8557a27a4c231cbc6a9867851 120 PIRSF PIRSF033736 1 114 2.4E-37 T 13-10-2018 IPR017021 Uncharacterised conserved protein UCP033763 COP00_24485 e5943de19139b73e2ff0fc90402f8a21 129 Pfam PF01844 HNH endonuclease 21 74 1.9E-12 T 13-10-2018 IPR002711 HNH endonuclease GO:0003676|GO:0004519 COP00_24485 e5943de19139b73e2ff0fc90402f8a21 129 Gene3D G3DSA:3.30.40.60 2 104 5.1E-15 T 13-10-2018 COP00_24485 e5943de19139b73e2ff0fc90402f8a21 129 SMART SM00507 8 71 7.9E-8 T 13-10-2018 IPR003615 HNH nuclease COP00_12425 e5943de19139b73e2ff0fc90402f8a21 129 Pfam PF01844 HNH endonuclease 21 74 1.9E-12 T 13-10-2018 IPR002711 HNH endonuclease GO:0003676|GO:0004519 COP00_12425 e5943de19139b73e2ff0fc90402f8a21 129 Gene3D G3DSA:3.30.40.60 2 104 5.1E-15 T 13-10-2018 COP00_12425 e5943de19139b73e2ff0fc90402f8a21 129 SMART SM00507 8 71 7.9E-8 T 13-10-2018 IPR003615 HNH nuclease COP00_20460 7f6b7b35fca8259961d77e94668def6a 239 Gene3D G3DSA:3.30.70.980 131 201 7.1E-47 T 13-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 COP00_20460 7f6b7b35fca8259961d77e94668def6a 239 SUPERFAMILY SSF75625 1 238 2.35E-83 T 13-10-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 COP00_20460 7f6b7b35fca8259961d77e94668def6a 239 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 1 237 32.257 T 13-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 COP00_20460 7f6b7b35fca8259961d77e94668def6a 239 Gene3D G3DSA:1.10.10.200 2 79 1.7E-25 T 13-10-2018 IPR017856 Integrase-like, N-terminal COP00_20460 7f6b7b35fca8259961d77e94668def6a 239 Gene3D G3DSA:3.30.70.980 83 234 7.1E-47 T 13-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 COP00_20460 7f6b7b35fca8259961d77e94668def6a 239 Pfam PF01709 Transcriptional regulator 4 235 5.0E-84 T 13-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 COP00_20460 7f6b7b35fca8259961d77e94668def6a 239 Hamap MF_00918 Probable transcriptional regulatory protein YeeN [yeeN]. 1 238 57.272 T 13-10-2018 IPR026562 Probable transcriptional regulatory protein YeeN COP00_20460 7f6b7b35fca8259961d77e94668def6a 239 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 235 2.1E-73 T 13-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 COP00_17390 f1f3109f9bd86e9d35a59ddf648a3181 475 SUPERFAMILY SSF56601 26 364 2.16E-71 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like COP00_17390 f1f3109f9bd86e9d35a59ddf648a3181 475 Pfam PF00144 Beta-lactamase 38 354 4.8E-57 T 13-10-2018 IPR001466 Beta-lactamase-related COP00_17390 f1f3109f9bd86e9d35a59ddf648a3181 475 Gene3D G3DSA:3.40.710.10 32 368 7.0E-85 T 13-10-2018 COP00_07185 8c4d8fbee56d7d708b8daacabf7b98dd 163 Hamap MF_00489 UPF0178 protein YaiI [yaiI]. 13 158 30.396 T 13-10-2018 IPR003791 Protein of unknown function UPF0178 COP00_07185 8c4d8fbee56d7d708b8daacabf7b98dd 163 Pfam PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 27 156 7.1E-40 T 13-10-2018 IPR003791 Protein of unknown function UPF0178 COP00_09610 e5a52001253f848aacfc17e258356fe7 411 Pfam PF13520 Amino acid permease 12 387 5.8E-11 T 13-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 COP00_09610 e5a52001253f848aacfc17e258356fe7 411 Gene3D G3DSA:1.20.1740.10 1 408 5.1E-31 T 13-10-2018 COP00_09610 e5a52001253f848aacfc17e258356fe7 411 PIRSF PIRSF006060 1 401 7.4E-34 T 13-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 COP00_14990 ecf6c5cea3065a0a4fa59f484a1db050 492 ProSitePatterns PS00609 Glycosyl hydrolases family 32 active site. 27 40 - T 13-10-2018 IPR018053 Glycoside hydrolase, family 32, active site GO:0004553|GO:0005975 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26 COP00_14990 ecf6c5cea3065a0a4fa59f484a1db050 492 Pfam PF00251 Glycosyl hydrolases family 32 N-terminal domain 27 330 6.4E-114 T 13-10-2018 IPR013148 Glycosyl hydrolase family 32, N-terminal COP00_14990 ecf6c5cea3065a0a4fa59f484a1db050 492 Pfam PF08244 Glycosyl hydrolases family 32 C terminal 351 480 2.4E-28 T 13-10-2018 IPR013189 Glycosyl hydrolase family 32, C-terminal COP00_14990 ecf6c5cea3065a0a4fa59f484a1db050 492 SMART SM00640 27 446 8.3E-156 T 13-10-2018 IPR001362 Glycoside hydrolase, family 32 GO:0004553|GO:0005975 COP00_14990 ecf6c5cea3065a0a4fa59f484a1db050 492 SUPERFAMILY SSF49899 331 486 6.17E-31 T 13-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily COP00_14990 ecf6c5cea3065a0a4fa59f484a1db050 492 Gene3D G3DSA:2.60.120.560 347 483 3.6E-34 T 13-10-2018 COP00_14990 ecf6c5cea3065a0a4fa59f484a1db050 492 TIGRFAM TIGR01322 scrB_fam: sucrose-6-phosphate hydrolase 15 457 1.8E-154 T 13-10-2018 IPR006232 Sucrose-6-phosphate hydrolase GO:0004564|GO:0005737|GO:0005975 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26 COP00_14990 ecf6c5cea3065a0a4fa59f484a1db050 492 SUPERFAMILY SSF75005 19 332 1.55E-121 T 13-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily COP00_14990 ecf6c5cea3065a0a4fa59f484a1db050 492 Gene3D G3DSA:2.115.10.20 1 346 2.5E-135 T 13-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily COP00_08150 c380f2d2f9b4a5f2d760396d59f02ca4 216 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 10 107 7.5E-28 T 13-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 COP00_08150 c380f2d2f9b4a5f2d760396d59f02ca4 216 SUPERFAMILY SSF161098 10 198 3.01E-48 T 13-10-2018 IPR035906 MetI-like superfamily COP00_08150 c380f2d2f9b4a5f2d760396d59f02ca4 216 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 33 213 7.5E-23 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 COP00_08150 c380f2d2f9b4a5f2d760396d59f02ca4 216 Gene3D G3DSA:1.10.3720.10 1 215 1.5E-57 T 13-10-2018 IPR035906 MetI-like superfamily COP00_12365 876d2a51adf65763bcfe86b00f2d5288 140 TIGRFAM TIGR01725 phge_HK97_gp10: phage protein, HK97 gp10 family 6 136 1.1E-10 T 13-10-2018 IPR010064 Bacteriophage HK97-gp10, putative tail-component COP00_24545 876d2a51adf65763bcfe86b00f2d5288 140 TIGRFAM TIGR01725 phge_HK97_gp10: phage protein, HK97 gp10 family 6 136 1.1E-10 T 13-10-2018 IPR010064 Bacteriophage HK97-gp10, putative tail-component COP00_00030 876d2a51adf65763bcfe86b00f2d5288 140 TIGRFAM TIGR01725 phge_HK97_gp10: phage protein, HK97 gp10 family 6 136 1.1E-10 T 13-10-2018 IPR010064 Bacteriophage HK97-gp10, putative tail-component COP00_00880 23c73284ba7d5ec17176bb2a62e2c09e 117 PIRSF PIRSF018579 1 113 2.1E-43 T 13-10-2018 IPR009709 Protein of unknown function DUF1290 COP00_00880 23c73284ba7d5ec17176bb2a62e2c09e 117 Pfam PF06947 Protein of unknown function (DUF1290) 22 107 4.5E-33 T 13-10-2018 IPR009709 Protein of unknown function DUF1290 COP00_12310 7c1b5e1d45c886bd95a7895decc2aacb 313 SUPERFAMILY SSF55846 6 159 1.1E-49 T 13-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 COP00_12310 7c1b5e1d45c886bd95a7895decc2aacb 313 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 25 143 6.1E-19 T 13-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 COP00_12310 7c1b5e1d45c886bd95a7895decc2aacb 313 SMART SM00644 15 154 9.1E-37 T 13-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 COP00_12310 7c1b5e1d45c886bd95a7895decc2aacb 313 SUPERFAMILY SSF54106 182 226 1.23E-11 T 13-10-2018 COP00_12310 7c1b5e1d45c886bd95a7895decc2aacb 313 Gene3D G3DSA:3.40.80.10 3 165 2.1E-50 T 13-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 COP00_12310 7c1b5e1d45c886bd95a7895decc2aacb 313 Gene3D G3DSA:3.10.350.10 177 240 1.2E-18 T 13-10-2018 IPR036779 LysM domain superfamily COP00_12310 7c1b5e1d45c886bd95a7895decc2aacb 313 Pfam PF01476 LysM domain 184 226 5.8E-16 T 13-10-2018 IPR018392 LysM domain COP00_12310 7c1b5e1d45c886bd95a7895decc2aacb 313 SMART SM00257 183 227 2.0E-18 T 13-10-2018 IPR018392 LysM domain COP00_00090 7c1b5e1d45c886bd95a7895decc2aacb 313 SUPERFAMILY SSF55846 6 159 1.1E-49 T 13-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 COP00_00090 7c1b5e1d45c886bd95a7895decc2aacb 313 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 25 143 6.1E-19 T 13-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 COP00_00090 7c1b5e1d45c886bd95a7895decc2aacb 313 SMART SM00644 15 154 9.1E-37 T 13-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 COP00_00090 7c1b5e1d45c886bd95a7895decc2aacb 313 SUPERFAMILY SSF54106 182 226 1.23E-11 T 13-10-2018 COP00_00090 7c1b5e1d45c886bd95a7895decc2aacb 313 Gene3D G3DSA:3.40.80.10 3 165 2.1E-50 T 13-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 COP00_00090 7c1b5e1d45c886bd95a7895decc2aacb 313 Gene3D G3DSA:3.10.350.10 177 240 1.2E-18 T 13-10-2018 IPR036779 LysM domain superfamily COP00_00090 7c1b5e1d45c886bd95a7895decc2aacb 313 Pfam PF01476 LysM domain 184 226 5.8E-16 T 13-10-2018 IPR018392 LysM domain COP00_00090 7c1b5e1d45c886bd95a7895decc2aacb 313 SMART SM00257 183 227 2.0E-18 T 13-10-2018 IPR018392 LysM domain COP00_11390 316e5f58bf1c4ebf52b0527a80d1c8c2 405 Gene3D G3DSA:3.40.190.10 49 364 5.8E-89 T 13-10-2018 COP00_11390 316e5f58bf1c4ebf52b0527a80d1c8c2 405 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 141 158 - T 13-10-2018 IPR006061 Solute-binding family 1, conserved site GO:0055085 COP00_11390 316e5f58bf1c4ebf52b0527a80d1c8c2 405 SUPERFAMILY SSF53850 33 401 5.93E-79 T 13-10-2018 COP00_11390 316e5f58bf1c4ebf52b0527a80d1c8c2 405 Pfam PF13416 Bacterial extracellular solute-binding protein 50 351 3.4E-45 T 13-10-2018 IPR006059 Bacterial extracellular solute-binding protein COP00_11390 316e5f58bf1c4ebf52b0527a80d1c8c2 405 Gene3D G3DSA:3.40.190.10 147 401 5.8E-89 T 13-10-2018 COP00_07050 8b33e1f84be7d47925432c6cba63441b 202 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 97 195 5.8E-44 T 13-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 COP00_07050 8b33e1f84be7d47925432c6cba63441b 202 PRINTS PR01703 Manganese superoxide dismutase signature 126 134 1.2E-27 T 13-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 COP00_07050 8b33e1f84be7d47925432c6cba63441b 202 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 1.2E-27 T 13-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 COP00_07050 8b33e1f84be7d47925432c6cba63441b 202 PRINTS PR01703 Manganese superoxide dismutase signature 73 86 1.2E-27 T 13-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 COP00_07050 8b33e1f84be7d47925432c6cba63441b 202 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 1.2E-27 T 13-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 COP00_07050 8b33e1f84be7d47925432c6cba63441b 202 PRINTS PR01703 Manganese superoxide dismutase signature 162 174 1.2E-27 T 13-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 COP00_07050 8b33e1f84be7d47925432c6cba63441b 202 Gene3D G3DSA:2.40.500.20 91 202 4.0E-53 T 13-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 COP00_07050 8b33e1f84be7d47925432c6cba63441b 202 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 2 90 6.1E-34 T 13-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 COP00_07050 8b33e1f84be7d47925432c6cba63441b 202 SUPERFAMILY SSF54719 92 201 1.96E-49 T 13-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 COP00_07050 8b33e1f84be7d47925432c6cba63441b 202 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 164 171 - T 13-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 COP00_07050 8b33e1f84be7d47925432c6cba63441b 202 PIRSF PIRSF000349 1 202 4.4E-87 T 13-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 COP00_07050 8b33e1f84be7d47925432c6cba63441b 202 Gene3D G3DSA:1.10.287.990 20 90 5.5E-32 T 13-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 COP00_07050 8b33e1f84be7d47925432c6cba63441b 202 SUPERFAMILY SSF46609 1 91 3.14E-38 T 13-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 COP00_16565 05ab2fbfaa1a289629e2701b5aaeb298 486 Gene3D G3DSA:3.40.50.620 1 332 3.8E-146 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold COP00_16565 05ab2fbfaa1a289629e2701b5aaeb298 486 PRINTS PR00987 Glutamyl-tRNA synthetase signature 22 33 9.9E-30 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 COP00_16565 05ab2fbfaa1a289629e2701b5aaeb298 486 PRINTS PR00987 Glutamyl-tRNA synthetase signature 37 50 9.9E-30 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 COP00_16565 05ab2fbfaa1a289629e2701b5aaeb298 486 PRINTS PR00987 Glutamyl-tRNA synthetase signature 8 20 9.9E-30 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 COP00_16565 05ab2fbfaa1a289629e2701b5aaeb298 486 PRINTS PR00987 Glutamyl-tRNA synthetase signature 194 204 9.9E-30 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 COP00_16565 05ab2fbfaa1a289629e2701b5aaeb298 486 PRINTS PR00987 Glutamyl-tRNA synthetase signature 210 218 9.9E-30 T 13-10-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0043039 COP00_16565 05ab2fbfaa1a289629e2701b5aaeb298 486 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 4 323 4.9E-131 T 13-10-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0004812|GO:0005524|GO:0043039 COP00_16565 05ab2fbfaa1a289629e2701b5aaeb298 486 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 4 484 3.4E-205 T 13-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 COP00_16565 05ab2fbfaa1a289629e2701b5aaeb298 486 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 4 484 35.082 T 13-10-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 COP00_16565 05ab2fbfaa1a289629e2701b5aaeb298 486 SUPERFAMILY SSF48163 298 481 2.35E-49 T 13-10-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 COP00_16565 05ab2fbfaa1a289629e2701b5aaeb298 486 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 11 22 - T 13-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 COP00_16565 05ab2fbfaa1a289629e2701b5aaeb298 486 SUPERFAMILY SSF52374 5 316 2.95E-117 T 13-10-2018 COP00_16565 05ab2fbfaa1a289629e2701b5aaeb298 486 Gene3D G3DSA:1.10.10.350 390 486 8.1E-35 T 13-10-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 COP00_12190 31b824ae7295873dfd4582c6e9b6a81b 174 Pfam PF02525 Flavodoxin-like fold 1 170 1.8E-48 T 13-10-2018 IPR003680 Flavodoxin-like fold COP00_12190 31b824ae7295873dfd4582c6e9b6a81b 174 SUPERFAMILY SSF52218 1 173 6.56E-52 T 13-10-2018 IPR029039 Flavoprotein-like superfamily COP00_12190 31b824ae7295873dfd4582c6e9b6a81b 174 Gene3D G3DSA:3.40.50.360 1 174 7.6E-60 T 13-10-2018 IPR029039 Flavoprotein-like superfamily COP00_17025 7d4745e2ed7579ad3465741a8390a67e 448 SUPERFAMILY SSF53738 3 180 5.49E-45 T 13-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 COP00_17025 7d4745e2ed7579ad3465741a8390a67e 448 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 3 132 1.5E-41 T 13-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 COP00_17025 7d4745e2ed7579ad3465741a8390a67e 448 SUPERFAMILY SSF55957 357 446 1.44E-27 T 13-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 COP00_17025 7d4745e2ed7579ad3465741a8390a67e 448 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 373 441 5.0E-19 T 13-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 COP00_17025 7d4745e2ed7579ad3465741a8390a67e 448 SUPERFAMILY SSF53738 257 366 6.28E-33 T 13-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 COP00_17025 7d4745e2ed7579ad3465741a8390a67e 448 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 158 253 3.5E-15 T 13-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 COP00_17025 7d4745e2ed7579ad3465741a8390a67e 448 Gene3D G3DSA:3.40.120.10 174 362 1.6E-71 T 13-10-2018 COP00_17025 7d4745e2ed7579ad3465741a8390a67e 448 Gene3D G3DSA:3.40.120.10 256 339 1.6E-71 T 13-10-2018 COP00_17025 7d4745e2ed7579ad3465741a8390a67e 448 Gene3D G3DSA:3.30.310.50 370 448 3.8E-30 T 13-10-2018 COP00_17025 7d4745e2ed7579ad3465741a8390a67e 448 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 5 442 1.1E-185 T 13-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 COP00_17025 7d4745e2ed7579ad3465741a8390a67e 448 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 173 192 1.1E-11 T 13-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 COP00_17025 7d4745e2ed7579ad3465741a8390a67e 448 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 233 248 1.1E-11 T 13-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 COP00_17025 7d4745e2ed7579ad3465741a8390a67e 448 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 93 107 1.1E-11 T 13-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 COP00_17025 7d4745e2ed7579ad3465741a8390a67e 448 SUPERFAMILY SSF53738 158 256 6.67E-26 T 13-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 COP00_17025 7d4745e2ed7579ad3465741a8390a67e 448 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 94 103 - T 13-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 COP00_17025 7d4745e2ed7579ad3465741a8390a67e 448 Gene3D G3DSA:3.40.120.10 3 155 7.0E-57 T 13-10-2018 COP00_17025 7d4745e2ed7579ad3465741a8390a67e 448 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 1 444 45.269 T 13-10-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 COP00_17025 7d4745e2ed7579ad3465741a8390a67e 448 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 257 368 3.3E-36 T 13-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 COP00_05835 d54fb23d52a7316c055fd175a280cca0 498 Pfam PF00271 Helicase conserved C-terminal domain 216 323 5.4E-18 T 13-10-2018 IPR001650 Helicase, C-terminal COP00_05835 d54fb23d52a7316c055fd175a280cca0 498 ProSitePatterns PS00690 DEAH-box subfamily ATP-dependent helicases signature. 131 140 - T 13-10-2018 IPR002464 DNA/RNA helicase, ATP-dependent, DEAH-box type, conserved site COP00_05835 d54fb23d52a7316c055fd175a280cca0 498 Gene3D G3DSA:3.40.50.300 1 199 1.3E-72 T 13-10-2018 COP00_05835 d54fb23d52a7316c055fd175a280cca0 498 SMART SM00490 242 324 8.4E-25 T 13-10-2018 IPR001650 Helicase, C-terminal COP00_05835 d54fb23d52a7316c055fd175a280cca0 498 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 7 361 4.5E-112 T 13-10-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 COP00_05835 d54fb23d52a7316c055fd175a280cca0 498 SMART SM00487 13 208 3.6E-28 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain COP00_05835 d54fb23d52a7316c055fd175a280cca0 498 SUPERFAMILY SSF52540 56 345 3.79E-59 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_05835 d54fb23d52a7316c055fd175a280cca0 498 Pfam PF00270 DEAD/DEAH box helicase 20 181 1.8E-22 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 COP00_16415 69690afee2d026eb136727e8ed3d0126 285 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 61 74 - T 13-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 COP00_16415 69690afee2d026eb136727e8ed3d0126 285 Gene3D G3DSA:3.20.20.20 8 282 1.5E-113 T 13-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 COP00_16415 69690afee2d026eb136727e8ed3d0126 285 SUPERFAMILY SSF51717 16 278 1.44E-100 T 13-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 COP00_16415 69690afee2d026eb136727e8ed3d0126 285 Pfam PF00809 Pterin binding enzyme 28 261 1.2E-86 T 13-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 COP00_16415 69690afee2d026eb136727e8ed3d0126 285 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 27 276 2.1E-100 T 13-10-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 COP00_16415 69690afee2d026eb136727e8ed3d0126 285 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 27 42 - T 13-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 COP00_00540 d2ba868a088efe58dd5f0585a07d60d5 43 TIGRFAM TIGR01732 tiny_TM_bacill: conserved hypothetical protein 14 40 5.6E-14 T 13-10-2018 IPR010070 Sporulation protein YjcZ-like COP00_00540 d2ba868a088efe58dd5f0585a07d60d5 43 Pfam PF09680 Protein of unknown function (Tiny_TM_bacill) 17 39 1.3E-13 T 13-10-2018 IPR010070 Sporulation protein YjcZ-like COP00_13460 c6b25ad96d4680a4c35490e5aa0a3766 189 Pfam PF02417 Chromate transporter 7 169 1.2E-33 T 13-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 COP00_14765 aef67802b5c97183322c24638c3b0aa5 439 SMART SM00919 236 435 1.1E-41 T 13-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 COP00_14765 aef67802b5c97183322c24638c3b0aa5 439 PIRSF PIRSF000106 4 438 1.2E-72 T 13-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 COP00_14765 aef67802b5c97183322c24638c3b0aa5 439 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 250 324 2.6E-6 T 13-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 COP00_14765 aef67802b5c97183322c24638c3b0aa5 439 Pfam PF00390 Malic enzyme, N-terminal domain 99 224 8.2E-27 T 13-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 COP00_14765 aef67802b5c97183322c24638c3b0aa5 439 Pfam PF03949 Malic enzyme, NAD binding domain 371 428 1.0E-7 T 13-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 COP00_14765 aef67802b5c97183322c24638c3b0aa5 439 SUPERFAMILY SSF51735 236 438 3.83E-41 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily COP00_14765 aef67802b5c97183322c24638c3b0aa5 439 SMART SM01274 91 224 8.5E-69 T 13-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 COP00_14765 aef67802b5c97183322c24638c3b0aa5 439 ProSitePatterns PS00331 Malic enzymes signature. 232 248 - T 13-10-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 COP00_14765 aef67802b5c97183322c24638c3b0aa5 439 Gene3D G3DSA:3.40.50.720 234 439 4.5E-46 T 13-10-2018 COP00_14765 aef67802b5c97183322c24638c3b0aa5 439 Gene3D G3DSA:3.40.50.10380 71 233 2.9E-64 T 13-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 COP00_14765 aef67802b5c97183322c24638c3b0aa5 439 SUPERFAMILY SSF53223 85 234 4.39E-50 T 13-10-2018 COP00_22645 2e6164726fbb0cd028db96efc77e11dc 1138 Gene3D G3DSA:3.10.196.10 877 1137 7.1E-60 T 13-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 COP00_22645 2e6164726fbb0cd028db96efc77e11dc 1138 SUPERFAMILY SSF47644 621 704 3.14E-23 T 13-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 COP00_22645 2e6164726fbb0cd028db96efc77e11dc 1138 Pfam PF00809 Pterin binding enzyme 338 571 4.8E-40 T 13-10-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 COP00_22645 2e6164726fbb0cd028db96efc77e11dc 1138 SUPERFAMILY SSF52242 705 835 2.09E-39 T 13-10-2018 IPR036724 Cobalamin-binding domain superfamily GO:0031419|GO:0046872 Reactome: R-HSA-196741 COP00_22645 2e6164726fbb0cd028db96efc77e11dc 1138 SUPERFAMILY SSF56507 861 1137 1.57E-88 T 13-10-2018 IPR037010 Vitamin B12-dependent methionine synthase, activation domain superfamily GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 COP00_22645 2e6164726fbb0cd028db96efc77e11dc 1138 Gene3D G3DSA:3.40.50.280 707 854 3.0E-46 T 13-10-2018 COP00_22645 2e6164726fbb0cd028db96efc77e11dc 1138 Gene3D G3DSA:3.20.20.20 318 614 6.8E-102 T 13-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 COP00_22645 2e6164726fbb0cd028db96efc77e11dc 1138 Pfam PF02574 Homocysteine S-methyltransferase 13 303 2.9E-72 T 13-10-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 COP00_22645 2e6164726fbb0cd028db96efc77e11dc 1138 Gene3D G3DSA:3.20.20.330 1 315 1.8E-104 T 13-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 COP00_22645 2e6164726fbb0cd028db96efc77e11dc 1138 SUPERFAMILY SSF51717 335 598 9.94E-79 T 13-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 COP00_22645 2e6164726fbb0cd028db96efc77e11dc 1138 TIGRFAM TIGR02082 metH: methionine synthase 8 1137 0.0 T 13-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 COP00_22645 2e6164726fbb0cd028db96efc77e11dc 1138 Gene3D G3DSA:1.10.1240.10 615 702 3.8E-26 T 13-10-2018 IPR036594 Methionine synthase domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 COP00_22645 2e6164726fbb0cd028db96efc77e11dc 1138 Gene3D G3DSA:1.10.288.10 890 948 7.1E-60 T 13-10-2018 COP00_22645 2e6164726fbb0cd028db96efc77e11dc 1138 PIRSF PIRSF000381 1 1138 0.0 T 13-10-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 COP00_22645 2e6164726fbb0cd028db96efc77e11dc 1138 SMART SM01018 622 705 1.5E-35 T 13-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 COP00_22645 2e6164726fbb0cd028db96efc77e11dc 1138 Pfam PF02310 B12 binding domain 711 800 3.4E-19 T 13-10-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 COP00_22645 2e6164726fbb0cd028db96efc77e11dc 1138 SUPERFAMILY SSF82282 2 377 4.58E-109 T 13-10-2018 IPR036589 Homocysteine-binding domain superfamily Reactome: R-HSA-1614635 COP00_22645 2e6164726fbb0cd028db96efc77e11dc 1138 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 892 1137 4.5E-52 T 13-10-2018 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-7977|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 COP00_22645 2e6164726fbb0cd028db96efc77e11dc 1138 Pfam PF02607 B12 binding domain 625 698 3.7E-22 T 13-10-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 COP00_16200 f6515a679c2e93ca8cccbc07292aba91 291 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 17 288 2.1E-81 T 13-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 COP00_16200 f6515a679c2e93ca8cccbc07292aba91 291 PIRSF PIRSF005917 4 291 1.2E-103 T 13-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 COP00_16200 f6515a679c2e93ca8cccbc07292aba91 291 SUPERFAMILY SSF53790 14 232 2.36E-82 T 13-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 COP00_16200 f6515a679c2e93ca8cccbc07292aba91 291 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 16 234 36.947 T 13-10-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 COP00_16200 f6515a679c2e93ca8cccbc07292aba91 291 Gene3D G3DSA:3.40.1010.10 2 123 8.9E-47 T 13-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 COP00_16200 f6515a679c2e93ca8cccbc07292aba91 291 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 16 215 2.2E-29 T 13-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 COP00_16200 f6515a679c2e93ca8cccbc07292aba91 291 Gene3D G3DSA:3.30.950.10 124 238 1.8E-42 T 13-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 COP00_16200 f6515a679c2e93ca8cccbc07292aba91 291 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 94 105 - T 13-10-2018 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 COP00_18215 13ec2c36513803d426b7603c4b43870c 241 SUPERFAMILY SSF52540 27 215 4.42E-23 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_18215 13ec2c36513803d426b7603c4b43870c 241 Gene3D G3DSA:3.40.50.300 22 85 1.9E-7 T 13-10-2018 COP00_18215 13ec2c36513803d426b7603c4b43870c 241 Gene3D G3DSA:3.40.50.300 99 216 3.0E-11 T 13-10-2018 COP00_18215 13ec2c36513803d426b7603c4b43870c 241 Pfam PF13304 AAA domain, putative AbiEii toxin, Type IV TA system 144 193 6.7E-9 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 COP00_18215 13ec2c36513803d426b7603c4b43870c 241 SMART SM00382 35 206 1.0E-6 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_18215 13ec2c36513803d426b7603c4b43870c 241 Pfam PF13476 AAA domain 31 60 4.1E-7 T 13-10-2018 IPR038729 Rad50/SbcC-type AAA domain COP00_13920 5dc7879ef0e8b8780403a4bd3dd5c6dc 356 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 226 242 - T 13-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 COP00_13920 5dc7879ef0e8b8780403a4bd3dd5c6dc 356 Gene3D G3DSA:3.30.70.1660 110 340 7.9E-96 T 13-10-2018 COP00_13920 5dc7879ef0e8b8780403a4bd3dd5c6dc 356 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 2 354 8.5E-174 T 13-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 COP00_13920 5dc7879ef0e8b8780403a4bd3dd5c6dc 356 Pfam PF00472 RF-1 domain 210 319 4.8E-41 T 13-10-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 COP00_13920 5dc7879ef0e8b8780403a4bd3dd5c6dc 356 Pfam PF03462 PCRF domain 8 202 3.5E-75 T 13-10-2018 IPR005139 Peptide chain release factor GO:0006415 COP00_13920 5dc7879ef0e8b8780403a4bd3dd5c6dc 356 SMART SM00937 62 177 6.1E-63 T 13-10-2018 IPR005139 Peptide chain release factor GO:0006415 COP00_13920 5dc7879ef0e8b8780403a4bd3dd5c6dc 356 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 1 355 40.634 T 13-10-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 COP00_13920 5dc7879ef0e8b8780403a4bd3dd5c6dc 356 SUPERFAMILY SSF75620 8 351 4.71E-135 T 13-10-2018 COP00_13920 5dc7879ef0e8b8780403a4bd3dd5c6dc 356 Gene3D G3DSA:3.30.160.20 209 295 7.9E-96 T 13-10-2018 COP00_13920 5dc7879ef0e8b8780403a4bd3dd5c6dc 356 Gene3D G3DSA:1.20.58.410 2 101 1.5E-10 T 13-10-2018 COP00_14175 38c108bc4bfd73ab6343375ac2e269e6 381 Gene3D G3DSA:3.40.1710.10 41 146 1.4E-5 T 13-10-2018 COP00_14175 38c108bc4bfd73ab6343375ac2e269e6 381 Pfam PF12698 ABC-2 family transporter protein 24 369 2.9E-40 T 13-10-2018 COP00_13865 540f311db9dbbf8b09a155a090fd9f92 150 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 116 131 1.5E-7 T 13-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 COP00_13865 540f311db9dbbf8b09a155a090fd9f92 150 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 3 20 1.5E-7 T 13-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 COP00_13865 540f311db9dbbf8b09a155a090fd9f92 150 SMART SM00226 1 144 8.2E-36 T 13-10-2018 IPR023485 Phosphotyrosine protein phosphatase I COP00_13865 540f311db9dbbf8b09a155a090fd9f92 150 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 3 141 1.3E-35 T 13-10-2018 IPR023485 Phosphotyrosine protein phosphatase I COP00_13865 540f311db9dbbf8b09a155a090fd9f92 150 Gene3D G3DSA:3.40.50.2300 1 149 2.7E-55 T 13-10-2018 COP00_13865 540f311db9dbbf8b09a155a090fd9f92 150 SUPERFAMILY SSF52788 2 145 4.71E-38 T 13-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily COP00_11090 a91d17fe89f63b33a41df0792bda3cbd 592 TIGRFAM TIGR02290 M3_fam_3: oligoendopeptidase, pepF/M3 family 9 590 1.6E-198 T 13-10-2018 IPR011977 Peptidase M3B, oligoendopeptidase-related clade 3 COP00_11090 a91d17fe89f63b33a41df0792bda3cbd 592 Pfam PF01432 Peptidase family M3 199 578 1.9E-18 T 13-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 COP00_11090 a91d17fe89f63b33a41df0792bda3cbd 592 SUPERFAMILY SSF55486 55 584 4.52E-91 T 13-10-2018 COP00_11090 a91d17fe89f63b33a41df0792bda3cbd 592 Pfam PF08439 Oligopeptidase F 115 177 9.7E-6 T 13-10-2018 IPR013647 Oligopeptidase F, N-terminal domain COP00_11090 a91d17fe89f63b33a41df0792bda3cbd 592 Gene3D G3DSA:1.10.1370.30 22 591 3.6E-124 T 13-10-2018 COP00_22230 afb09308fc7d6a5b78ae51930e2aaf6b 719 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 460 486 5.6E-5 T 13-10-2018 IPR023908 xxxLxxG heptad repeat COP00_22230 afb09308fc7d6a5b78ae51930e2aaf6b 719 TIGRFAM TIGR03057 xxxLxxG_by_4: X-X-X-Leu-X-X-Gly heptad repeats 250 275 1.9E-5 T 13-10-2018 IPR023908 xxxLxxG heptad repeat COP00_22230 afb09308fc7d6a5b78ae51930e2aaf6b 719 TIGRFAM TIGR03062 pip_yhgE_Cterm: YhgE/Pip C-terminal domain 506 706 6.8E-70 T 13-10-2018 IPR017501 Phage infection protein, YhgE, C-terminal COP00_22230 afb09308fc7d6a5b78ae51930e2aaf6b 719 SUPERFAMILY SSF58104 214 471 3.66E-6 T 13-10-2018 COP00_22230 afb09308fc7d6a5b78ae51930e2aaf6b 719 Pfam PF12698 ABC-2 family transporter protein 21 702 3.5E-23 T 13-10-2018 COP00_22230 afb09308fc7d6a5b78ae51930e2aaf6b 719 TIGRFAM TIGR03061 pip_yhgE_Nterm: YhgE/Pip N-terminal domain 7 169 3.7E-65 T 13-10-2018 IPR017500 Phage infection protein, YhgE, N-terminal COP00_06055 2965c73c65f2b6498e051fec9bfecc77 339 PIRSF PIRSF011570 1 335 4.1E-172 T 13-10-2018 IPR010894 Stage V sporulation AD COP00_06055 2965c73c65f2b6498e051fec9bfecc77 339 SUPERFAMILY SSF53901 57 285 1.33E-19 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 COP00_06055 2965c73c65f2b6498e051fec9bfecc77 339 TIGRFAM TIGR02845 spore_V_AD: stage V sporulation protein AD 6 332 6.2E-167 T 13-10-2018 IPR010894 Stage V sporulation AD COP00_06055 2965c73c65f2b6498e051fec9bfecc77 339 Pfam PF07451 Stage V sporulation protein AD (SpoVAD) 5 332 1.5E-155 T 13-10-2018 IPR010894 Stage V sporulation AD COP00_06055 2965c73c65f2b6498e051fec9bfecc77 339 Gene3D G3DSA:3.40.47.40 1 339 9.7E-163 T 13-10-2018 IPR038369 Stage V sporulation AD superfamily COP00_05215 88f2be84e29d1b8d629a4714fbe9db8f 181 SUPERFAMILY SSF101307 5 162 3.14E-50 T 13-10-2018 IPR036681 PgpA-like superfamily GO:0006629|GO:0008962 COP00_05215 88f2be84e29d1b8d629a4714fbe9db8f 181 PIRSF PIRSF019587 4 168 4.3E-69 T 13-10-2018 IPR026038 Putative phosphatidylglycerophosphatase COP00_05215 88f2be84e29d1b8d629a4714fbe9db8f 181 Pfam PF04608 Phosphatidylglycerophosphatase A 22 158 2.1E-18 T 13-10-2018 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 COP00_05215 88f2be84e29d1b8d629a4714fbe9db8f 181 Gene3D G3DSA:1.10.3760.10 1 165 2.1E-73 T 13-10-2018 COP00_08485 0de4c61f5749b655caa6d4fcffddebb9 190 SUPERFAMILY SSF52972 2 184 2.03E-63 T 13-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like COP00_08485 0de4c61f5749b655caa6d4fcffddebb9 190 PIRSF PIRSF006305 1 189 2.1E-61 T 13-10-2018 IPR003697 Maf-like protein GO:0047429 COP00_08485 0de4c61f5749b655caa6d4fcffddebb9 190 TIGRFAM TIGR00172 maf: septum formation protein Maf 1 183 4.1E-67 T 13-10-2018 IPR003697 Maf-like protein GO:0047429 COP00_08485 0de4c61f5749b655caa6d4fcffddebb9 190 Pfam PF02545 Maf-like protein 5 184 7.2E-59 T 13-10-2018 IPR003697 Maf-like protein GO:0047429 COP00_08485 0de4c61f5749b655caa6d4fcffddebb9 190 Hamap MF_00528 Septum formation protein Maf [maf]. 4 189 31.894 T 13-10-2018 IPR003697 Maf-like protein GO:0047429 COP00_08485 0de4c61f5749b655caa6d4fcffddebb9 190 Gene3D G3DSA:3.90.950.10 1 189 1.2E-76 T 13-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like COP00_19935 9b6e342fb8583d7dbadbb9a5b04cb8b2 153 Gene3D G3DSA:3.40.630.30 8 150 6.1E-22 T 13-10-2018 COP00_19935 9b6e342fb8583d7dbadbb9a5b04cb8b2 153 Pfam PF00583 Acetyltransferase (GNAT) family 39 142 8.9E-11 T 13-10-2018 IPR000182 GNAT domain COP00_19935 9b6e342fb8583d7dbadbb9a5b04cb8b2 153 SUPERFAMILY SSF55729 13 144 1.15E-19 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase COP00_06360 9c04d16a1453b2008776c1f8545556e4 535 SUPERFAMILY SSF53187 6 517 5.19E-26 T 13-10-2018 COP00_06360 9c04d16a1453b2008776c1f8545556e4 535 Gene3D G3DSA:3.40.630.10 3 231 4.3E-33 T 13-10-2018 COP00_06360 9c04d16a1453b2008776c1f8545556e4 535 Pfam PF01546 Peptidase family M20/M25/M40 125 471 2.6E-9 T 13-10-2018 IPR002933 Peptidase M20 GO:0016787 COP00_06360 9c04d16a1453b2008776c1f8545556e4 535 PIRSF PIRSF010386 1 535 4.2E-208 T 13-10-2018 IPR012166 Uncharacterised protein family RocB COP00_17100 8a5b9f5abdb48fed39612733ed3827c4 270 ProSitePatterns PS00552 MerR-type HTH domain signature. 5 27 - T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 COP00_17100 8a5b9f5abdb48fed39612733ed3827c4 270 Pfam PF06445 GyrI-like small molecule binding domain 122 268 1.8E-15 T 13-10-2018 IPR029442 GyrI-like small molecule binding domain COP00_17100 8a5b9f5abdb48fed39612733ed3827c4 270 SMART SM00871 121 268 8.5E-17 T 13-10-2018 IPR010499 Bacterial transcription activator, effector binding COP00_17100 8a5b9f5abdb48fed39612733ed3827c4 270 SUPERFAMILY SSF46955 2 103 4.03E-27 T 13-10-2018 IPR009061 Putative DNA-binding domain superfamily COP00_17100 8a5b9f5abdb48fed39612733ed3827c4 270 SUPERFAMILY SSF55136 122 270 1.19E-18 T 13-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily COP00_17100 8a5b9f5abdb48fed39612733ed3827c4 270 Gene3D G3DSA:3.20.80.10 122 270 5.4E-34 T 13-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily COP00_17100 8a5b9f5abdb48fed39612733ed3827c4 270 Gene3D G3DSA:1.10.1660.10 2 121 1.9E-27 T 13-10-2018 COP00_17100 8a5b9f5abdb48fed39612733ed3827c4 270 SMART SM00422 2 72 1.1E-15 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 COP00_17100 8a5b9f5abdb48fed39612733ed3827c4 270 Pfam PF00376 MerR family regulatory protein 3 41 1.8E-14 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 COP00_06115 084dabaf723f81a4dbebd3549bd81f0e 149 Pfam PF01475 Ferric uptake regulator family 15 136 3.8E-40 T 13-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 COP00_06115 084dabaf723f81a4dbebd3549bd81f0e 149 Gene3D G3DSA:3.30.1490.190 93 149 2.1E-18 T 13-10-2018 COP00_06115 084dabaf723f81a4dbebd3549bd81f0e 149 Gene3D G3DSA:1.10.10.10 1 88 6.3E-29 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_06115 084dabaf723f81a4dbebd3549bd81f0e 149 SUPERFAMILY SSF46785 7 142 9.98E-39 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_14195 686b4977c60ae31cd4643d1abcd2c4a0 214 Gene3D G3DSA:3.40.50.12740 3 210 1.5E-58 T 13-10-2018 COP00_14195 686b4977c60ae31cd4643d1abcd2c4a0 214 SMART SM00421 149 206 1.0E-18 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 COP00_14195 686b4977c60ae31cd4643d1abcd2c4a0 214 Pfam PF00196 Bacterial regulatory proteins, luxR family 152 205 2.0E-15 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 COP00_14195 686b4977c60ae31cd4643d1abcd2c4a0 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 152 166 6.6E-10 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 COP00_14195 686b4977c60ae31cd4643d1abcd2c4a0 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 182 194 6.6E-10 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 COP00_14195 686b4977c60ae31cd4643d1abcd2c4a0 214 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 166 182 6.6E-10 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 COP00_14195 686b4977c60ae31cd4643d1abcd2c4a0 214 Pfam PF00072 Response regulator receiver domain 5 116 2.9E-24 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 COP00_14195 686b4977c60ae31cd4643d1abcd2c4a0 214 SMART SM00448 3 115 1.3E-28 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 COP00_14195 686b4977c60ae31cd4643d1abcd2c4a0 214 ProSitePatterns PS00622 LuxR-type HTH domain signature. 166 193 - T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 COP00_14195 686b4977c60ae31cd4643d1abcd2c4a0 214 SUPERFAMILY SSF52172 1 131 6.97E-31 T 13-10-2018 IPR011006 CheY-like superfamily COP00_14195 686b4977c60ae31cd4643d1abcd2c4a0 214 SUPERFAMILY SSF46894 149 207 2.99E-16 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 COP00_16585 20d54c4ea3dc9caaeb0e47b51ea7dc1f 249 Gene3D G3DSA:3.30.1330.30 1 75 2.3E-13 T 13-10-2018 IPR029064 50S ribosomal protein L30e-like COP00_16585 20d54c4ea3dc9caaeb0e47b51ea7dc1f 249 Pfam PF00588 SpoU rRNA Methylase family 98 238 2.1E-40 T 13-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 COP00_16585 20d54c4ea3dc9caaeb0e47b51ea7dc1f 249 SUPERFAMILY SSF75217 69 245 1.5E-50 T 13-10-2018 IPR029028 Alpha/beta knot methyltransferases COP00_16585 20d54c4ea3dc9caaeb0e47b51ea7dc1f 249 SMART SM00967 7 81 5.8E-20 T 13-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 COP00_16585 20d54c4ea3dc9caaeb0e47b51ea7dc1f 249 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 7 81 1.8E-21 T 13-10-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 COP00_16585 20d54c4ea3dc9caaeb0e47b51ea7dc1f 249 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 5 244 1.0E-90 T 13-10-2018 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 Reactome: R-HSA-6793080 COP00_16585 20d54c4ea3dc9caaeb0e47b51ea7dc1f 249 SUPERFAMILY SSF55315 2 78 8.07E-19 T 13-10-2018 IPR029064 50S ribosomal protein L30e-like COP00_16585 20d54c4ea3dc9caaeb0e47b51ea7dc1f 249 Gene3D G3DSA:3.40.1280.10 76 245 3.7E-58 T 13-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal COP00_08245 d1c67c8d1aa6c1f03703f4891da0d619 733 Pfam PF02824 TGS domain 394 453 2.1E-22 T 13-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 COP00_08245 d1c67c8d1aa6c1f03703f4891da0d619 733 SUPERFAMILY SSF55021 656 733 2.96E-12 T 13-10-2018 COP00_08245 d1c67c8d1aa6c1f03703f4891da0d619 733 Gene3D G3DSA:3.30.460.10 198 329 4.3E-54 T 13-10-2018 COP00_08245 d1c67c8d1aa6c1f03703f4891da0d619 733 Pfam PF13291 ACT domain 654 730 5.5E-21 T 13-10-2018 IPR002912 ACT domain COP00_08245 d1c67c8d1aa6c1f03703f4891da0d619 733 SUPERFAMILY SSF81271 381 453 2.29E-22 T 13-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 COP00_08245 d1c67c8d1aa6c1f03703f4891da0d619 733 SMART SM00954 240 350 1.5E-69 T 13-10-2018 IPR007685 RelA/SpoT GO:0015969 COP00_08245 d1c67c8d1aa6c1f03703f4891da0d619 733 SUPERFAMILY SSF81301 185 398 1.39E-67 T 13-10-2018 COP00_08245 d1c67c8d1aa6c1f03703f4891da0d619 733 Gene3D G3DSA:3.30.70.260 654 733 4.1E-18 T 13-10-2018 COP00_08245 d1c67c8d1aa6c1f03703f4891da0d619 733 Gene3D G3DSA:1.10.3210.10 1 196 5.8E-88 T 13-10-2018 COP00_08245 d1c67c8d1aa6c1f03703f4891da0d619 733 Gene3D G3DSA:3.10.20.30 387 459 8.6E-32 T 13-10-2018 IPR012675 Beta-grasp domain superfamily COP00_08245 d1c67c8d1aa6c1f03703f4891da0d619 733 SUPERFAMILY SSF109604 10 196 3.77E-76 T 13-10-2018 COP00_08245 d1c67c8d1aa6c1f03703f4891da0d619 733 Pfam PF04607 Region found in RelA / SpoT proteins 240 350 6.3E-40 T 13-10-2018 IPR007685 RelA/SpoT GO:0015969 COP00_08245 d1c67c8d1aa6c1f03703f4891da0d619 733 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 31 730 5.8E-260 T 13-10-2018 IPR004811 RelA/SpoT family GO:0015969 COP00_08245 d1c67c8d1aa6c1f03703f4891da0d619 733 SMART SM00471 46 158 4.1E-9 T 13-10-2018 IPR003607 HD/PDEase domain COP00_08245 d1c67c8d1aa6c1f03703f4891da0d619 733 Pfam PF13328 HD domain 31 180 5.3E-52 T 13-10-2018 IPR003607 HD/PDEase domain COP00_09575 b944bbe39c97a8cef1e98c59690841d3 373 SUPERFAMILY SSF48208 13 363 7.73E-81 T 13-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 COP00_09575 b944bbe39c97a8cef1e98c59690841d3 373 Pfam PF07470 Glycosyl Hydrolase Family 88 14 363 5.8E-112 T 13-10-2018 IPR010905 Glycosyl hydrolase, family 88 COP00_09575 b944bbe39c97a8cef1e98c59690841d3 373 Gene3D G3DSA:1.50.10.10 1 367 1.0E-144 T 13-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 COP00_18865 b24d1b2dbe438a17597e043311008190 322 SUPERFAMILY SSF46785 3 59 7.3E-11 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_18865 b24d1b2dbe438a17597e043311008190 322 PIRSF PIRSF016838 88 322 3.4E-13 T 13-10-2018 IPR028349 Protein PafC COP00_18865 b24d1b2dbe438a17597e043311008190 322 PIRSF PIRSF016838 2 52 0.0031 T 13-10-2018 IPR028349 Protein PafC COP00_18865 b24d1b2dbe438a17597e043311008190 322 Gene3D G3DSA:1.10.10.10 2 63 5.4E-12 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_18865 b24d1b2dbe438a17597e043311008190 322 Pfam PF13280 WYL domain 141 313 4.8E-36 T 13-10-2018 IPR026881 WYL domain COP00_18865 b24d1b2dbe438a17597e043311008190 322 Pfam PF08279 HTH domain 5 60 4.5E-15 T 13-10-2018 IPR013196 Helix-turn-helix, type 11 COP00_18865 b24d1b2dbe438a17597e043311008190 322 ProSitePatterns PS00894 DeoR-type HTH domain signature. 5 39 - T 13-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 COP00_03135 4c6b769c95170bc3bb5f625c97a25023 383 Gene3D G3DSA:1.10.150.130 57 165 4.7E-28 T 13-10-2018 IPR010998 Integrase/recombinase, N-terminal COP00_03135 4c6b769c95170bc3bb5f625c97a25023 383 SUPERFAMILY SSF56349 61 362 1.88E-64 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 COP00_03135 4c6b769c95170bc3bb5f625c97a25023 383 Pfam PF14659 Phage integrase, N-terminal SAM-like domain 62 119 7.0E-17 T 13-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 COP00_03135 4c6b769c95170bc3bb5f625c97a25023 383 Pfam PF14657 Arm DNA-binding domain 10 54 3.9E-8 T 13-10-2018 IPR028259 AP2-like integrase, N-terminal domain COP00_03135 4c6b769c95170bc3bb5f625c97a25023 383 Pfam PF00589 Phage integrase family 172 362 2.9E-27 T 13-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 COP00_03135 4c6b769c95170bc3bb5f625c97a25023 383 Gene3D G3DSA:1.10.443.10 166 374 7.0E-49 T 13-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 COP00_05320 d927ed2085c3a408cd5d4475fa74e36b 295 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 174 263 7.1E-30 T 13-10-2018 IPR020045 DNA polymerase I-like, H3TH domain GO:0003677|GO:0003824 COP00_05320 d927ed2085c3a408cd5d4475fa74e36b 295 SUPERFAMILY SSF88723 2 153 3.49E-44 T 13-10-2018 IPR029060 PIN-like domain superfamily COP00_05320 d927ed2085c3a408cd5d4475fa74e36b 295 Gene3D G3DSA:1.10.150.20 177 249 2.7E-82 T 13-10-2018 COP00_05320 d927ed2085c3a408cd5d4475fa74e36b 295 SMART SM00475 3 264 6.7E-128 T 13-10-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 COP00_05320 d927ed2085c3a408cd5d4475fa74e36b 295 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 4 172 6.7E-48 T 13-10-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 COP00_05320 d927ed2085c3a408cd5d4475fa74e36b 295 SUPERFAMILY SSF47807 173 261 8.07E-28 T 13-10-2018 IPR036279 5'-3' exonuclease, C-terminal domain superfamily COP00_05320 d927ed2085c3a408cd5d4475fa74e36b 295 Gene3D G3DSA:3.40.50.1010 5 272 2.7E-82 T 13-10-2018 COP00_05320 d927ed2085c3a408cd5d4475fa74e36b 295 SMART SM00279 176 211 9.2E-19 T 13-10-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 COP00_12185 78a450c5ceba10e1d2e7d1c79a5b5c1d 152 Gene3D G3DSA:1.10.260.40 1 111 8.4E-24 T 13-10-2018 COP00_12185 78a450c5ceba10e1d2e7d1c79a5b5c1d 152 SMART SM00530 5 61 7.3E-17 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 COP00_12185 78a450c5ceba10e1d2e7d1c79a5b5c1d 152 Pfam PF01381 Helix-turn-helix 6 61 1.7E-18 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 COP00_12185 78a450c5ceba10e1d2e7d1c79a5b5c1d 152 SUPERFAMILY SSF47413 2 64 1.85E-18 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 COP00_12185 78a450c5ceba10e1d2e7d1c79a5b5c1d 152 Pfam PF08671 Anti-repressor SinI 124 147 1.7E-8 T 13-10-2018 IPR010981 SinR repressor/SinI anti-repressor, dimerisation domain GO:0006355|GO:0046983 COP00_11425 7a8fde47d78e61cbbe225dec673c7f62 309 PRINTS PR00690 Adhesin family signature 273 292 1.9E-53 T 13-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 COP00_11425 7a8fde47d78e61cbbe225dec673c7f62 309 PRINTS PR00690 Adhesin family signature 76 93 1.9E-53 T 13-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 COP00_11425 7a8fde47d78e61cbbe225dec673c7f62 309 PRINTS PR00690 Adhesin family signature 247 265 1.9E-53 T 13-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 COP00_11425 7a8fde47d78e61cbbe225dec673c7f62 309 PRINTS PR00690 Adhesin family signature 63 76 1.9E-53 T 13-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 COP00_11425 7a8fde47d78e61cbbe225dec673c7f62 309 PRINTS PR00690 Adhesin family signature 194 215 1.9E-53 T 13-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 COP00_11425 7a8fde47d78e61cbbe225dec673c7f62 309 PRINTS PR00690 Adhesin family signature 32 50 1.9E-53 T 13-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 COP00_11425 7a8fde47d78e61cbbe225dec673c7f62 309 Pfam PF01297 Zinc-uptake complex component A periplasmic 35 305 2.7E-81 T 13-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 COP00_11425 7a8fde47d78e61cbbe225dec673c7f62 309 Gene3D G3DSA:3.40.50.1980 31 183 7.7E-56 T 13-10-2018 COP00_11425 7a8fde47d78e61cbbe225dec673c7f62 309 SUPERFAMILY SSF53807 15 307 1.72E-88 T 13-10-2018 COP00_11425 7a8fde47d78e61cbbe225dec673c7f62 309 PRINTS PR00691 Adhesin B signature 220 238 7.9E-84 T 13-10-2018 IPR006129 Adhesin B GO:0007155 COP00_11425 7a8fde47d78e61cbbe225dec673c7f62 309 PRINTS PR00691 Adhesin B signature 265 283 7.9E-84 T 13-10-2018 IPR006129 Adhesin B GO:0007155 COP00_11425 7a8fde47d78e61cbbe225dec673c7f62 309 PRINTS PR00691 Adhesin B signature 76 95 7.9E-84 T 13-10-2018 IPR006129 Adhesin B GO:0007155 COP00_11425 7a8fde47d78e61cbbe225dec673c7f62 309 PRINTS PR00691 Adhesin B signature 136 155 7.9E-84 T 13-10-2018 IPR006129 Adhesin B GO:0007155 COP00_11425 7a8fde47d78e61cbbe225dec673c7f62 309 PRINTS PR00691 Adhesin B signature 194 211 7.9E-84 T 13-10-2018 IPR006129 Adhesin B GO:0007155 COP00_11425 7a8fde47d78e61cbbe225dec673c7f62 309 PRINTS PR00691 Adhesin B signature 57 75 7.9E-84 T 13-10-2018 IPR006129 Adhesin B GO:0007155 COP00_11425 7a8fde47d78e61cbbe225dec673c7f62 309 PRINTS PR00691 Adhesin B signature 32 53 7.9E-84 T 13-10-2018 IPR006129 Adhesin B GO:0007155 COP00_11425 7a8fde47d78e61cbbe225dec673c7f62 309 PRINTS PR00691 Adhesin B signature 286 304 7.9E-84 T 13-10-2018 IPR006129 Adhesin B GO:0007155 COP00_11425 7a8fde47d78e61cbbe225dec673c7f62 309 PRINTS PR00691 Adhesin B signature 243 260 7.9E-84 T 13-10-2018 IPR006129 Adhesin B GO:0007155 COP00_11425 7a8fde47d78e61cbbe225dec673c7f62 309 Gene3D G3DSA:3.40.50.1980 184 309 1.2E-45 T 13-10-2018 COP00_23480 5e61f2ecbd8896a46a8e5e3078b3bf0c 1295 Pfam PF10145 Phage-related minor tail protein 202 399 9.0E-47 T 13-10-2018 IPR010090 Phage tail tape measure protein COP00_23480 5e61f2ecbd8896a46a8e5e3078b3bf0c 1295 TIGRFAM TIGR01760 tape_meas_TP901: phage tail tape measure protein, TP901 family, core region 162 508 3.9E-102 T 13-10-2018 IPR010090 Phage tail tape measure protein COP00_23480 5e61f2ecbd8896a46a8e5e3078b3bf0c 1295 SUPERFAMILY SSF57997 27 130 6.41E-5 T 13-10-2018 COP00_08005 b00b12f0248066286202c402effb875e 1071 SUPERFAMILY SSF63380 663 891 1.6E-66 T 13-10-2018 IPR017938 Riboflavin synthase-like beta-barrel COP00_08005 b00b12f0248066286202c402effb875e 1071 Gene3D G3DSA:1.10.630.10 3 473 7.7E-170 T 13-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 COP00_08005 b00b12f0248066286202c402effb875e 1071 PRINTS PR00369 Flavodoxin signature 568 578 5.5E-8 T 13-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 COP00_08005 b00b12f0248066286202c402effb875e 1071 PRINTS PR00369 Flavodoxin signature 593 612 5.5E-8 T 13-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 COP00_08005 b00b12f0248066286202c402effb875e 1071 PRINTS PR00369 Flavodoxin signature 490 503 5.5E-8 T 13-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 COP00_08005 b00b12f0248066286202c402effb875e 1071 Gene3D G3DSA:2.40.30.10 676 884 5.9E-73 T 13-10-2018 COP00_08005 b00b12f0248066286202c402effb875e 1071 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 935 944 9.8E-32 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 COP00_08005 b00b12f0248066286202c402effb875e 1071 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 948 959 9.8E-32 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 COP00_08005 b00b12f0248066286202c402effb875e 1071 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 979 995 9.8E-32 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 COP00_08005 b00b12f0248066286202c402effb875e 1071 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 1002 1010 9.8E-32 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 COP00_08005 b00b12f0248066286202c402effb875e 1071 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 701 711 9.8E-32 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 COP00_08005 b00b12f0248066286202c402effb875e 1071 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 906 925 9.8E-32 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 COP00_08005 b00b12f0248066286202c402effb875e 1071 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 834 841 9.8E-32 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 COP00_08005 b00b12f0248066286202c402effb875e 1071 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 869 878 9.8E-32 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 COP00_08005 b00b12f0248066286202c402effb875e 1071 SUPERFAMILY SSF52218 485 640 4.54E-42 T 13-10-2018 IPR029039 Flavoprotein-like superfamily COP00_08005 b00b12f0248066286202c402effb875e 1071 Pfam PF00667 FAD binding domain 666 874 3.4E-41 T 13-10-2018 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding GO:0016491|GO:0055114 COP00_08005 b00b12f0248066286202c402effb875e 1071 Gene3D G3DSA:3.40.50.80 895 1055 1.4E-58 T 13-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain COP00_08005 b00b12f0248066286202c402effb875e 1071 SUPERFAMILY SSF52343 894 1053 2.88E-48 T 13-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain COP00_08005 b00b12f0248066286202c402effb875e 1071 SUPERFAMILY SSF48264 3 454 3.14E-113 T 13-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 COP00_08005 b00b12f0248066286202c402effb875e 1071 Gene3D G3DSA:1.20.990.10 711 832 5.9E-73 T 13-10-2018 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily GO:0016491|GO:0055114 COP00_08005 b00b12f0248066286202c402effb875e 1071 Pfam PF00067 Cytochrome P450 16 447 1.5E-87 T 13-10-2018 IPR001128 Cytochrome P450 GO:0005506|GO:0016705|GO:0020037|GO:0055114 COP00_08005 b00b12f0248066286202c402effb875e 1071 PIRSF PIRSF000209 1 1056 0.0 T 13-10-2018 IPR023206 Bifunctional cytochrome P450/NADPH--cytochrome P450 reductase GO:0003958|GO:0055114|GO:0070330 KEGG: 00071+1.14.14.1|KEGG: 00140+1.14.14.1|KEGG: 00232+1.14.14.1|KEGG: 00380+1.14.14.1|KEGG: 00590+1.14.14.1|KEGG: 00591+1.14.14.1|KEGG: 00627+1.14.14.1|KEGG: 00830+1.14.14.1|KEGG: 00980+1.14.14.1|KEGG: 00982+1.14.14.1|MetaCyc: PWY-5451|MetaCyc: PWY-5665|MetaCyc: PWY-6398|MetaCyc: PWY-6992|MetaCyc: PWY-7466|MetaCyc: PWY-7826 COP00_08005 b00b12f0248066286202c402effb875e 1071 Gene3D G3DSA:3.40.50.360 486 637 9.8E-45 T 13-10-2018 IPR029039 Flavoprotein-like superfamily COP00_08005 b00b12f0248066286202c402effb875e 1071 Pfam PF00175 Oxidoreductase NAD-binding domain 907 1017 6.2E-16 T 13-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 COP00_08005 b00b12f0248066286202c402effb875e 1071 ProSitePatterns PS00086 Cytochrome P450 cysteine heme-iron ligand signature. 396 405 - T 13-10-2018 IPR017972 Cytochrome P450, conserved site GO:0016705|GO:0055114 COP00_08005 b00b12f0248066286202c402effb875e 1071 Pfam PF00258 Flavodoxin 491 623 2.5E-27 T 13-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 COP00_21590 3bc71c6a8ade70ce99505346d9bcaae3 676 SUPERFAMILY SSF47384 460 525 1.65E-13 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 COP00_21590 3bc71c6a8ade70ce99505346d9bcaae3 676 PRINTS PR00344 Bacterial sensor protein C-terminal signature 625 635 1.6E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 COP00_21590 3bc71c6a8ade70ce99505346d9bcaae3 676 PRINTS PR00344 Bacterial sensor protein C-terminal signature 660 673 1.6E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 COP00_21590 3bc71c6a8ade70ce99505346d9bcaae3 676 PRINTS PR00344 Bacterial sensor protein C-terminal signature 607 621 1.6E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 COP00_21590 3bc71c6a8ade70ce99505346d9bcaae3 676 PRINTS PR00344 Bacterial sensor protein C-terminal signature 636 654 1.6E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 COP00_21590 3bc71c6a8ade70ce99505346d9bcaae3 676 SMART SM00388 464 527 2.8E-14 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 COP00_21590 3bc71c6a8ade70ce99505346d9bcaae3 676 SMART SM00091 219 284 12.0 T 13-10-2018 IPR000014 PAS domain COP00_21590 3bc71c6a8ade70ce99505346d9bcaae3 676 SMART SM00091 335 402 0.011 T 13-10-2018 IPR000014 PAS domain COP00_21590 3bc71c6a8ade70ce99505346d9bcaae3 676 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 571 675 2.8E-23 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase COP00_21590 3bc71c6a8ade70ce99505346d9bcaae3 676 SUPERFAMILY SSF55785 233 334 9.71E-5 T 13-10-2018 IPR035965 PAS domain superfamily COP00_21590 3bc71c6a8ade70ce99505346d9bcaae3 676 Pfam PF00512 His Kinase A (phospho-acceptor) domain 465 524 1.6E-13 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 COP00_21590 3bc71c6a8ade70ce99505346d9bcaae3 676 Gene3D G3DSA:3.30.565.10 527 676 1.6E-43 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily COP00_21590 3bc71c6a8ade70ce99505346d9bcaae3 676 Gene3D G3DSA:3.30.450.20 336 467 3.4E-20 T 13-10-2018 COP00_21590 3bc71c6a8ade70ce99505346d9bcaae3 676 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 339 456 1.0E-11 T 13-10-2018 IPR000014 PAS domain COP00_21590 3bc71c6a8ade70ce99505346d9bcaae3 676 Pfam PF08448 PAS fold 342 450 1.4E-14 T 13-10-2018 IPR013656 PAS fold-4 COP00_21590 3bc71c6a8ade70ce99505346d9bcaae3 676 Pfam PF13596 PAS domain 221 325 1.3E-16 T 13-10-2018 COP00_21590 3bc71c6a8ade70ce99505346d9bcaae3 676 SUPERFAMILY SSF55874 532 673 2.23E-37 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily COP00_21590 3bc71c6a8ade70ce99505346d9bcaae3 676 Gene3D G3DSA:1.10.287.130 468 523 1.3E-15 T 13-10-2018 COP00_21590 3bc71c6a8ade70ce99505346d9bcaae3 676 SMART SM00387 569 676 1.5E-31 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase COP00_21590 3bc71c6a8ade70ce99505346d9bcaae3 676 Gene3D G3DSA:3.30.450.20 205 325 2.1E-10 T 13-10-2018 COP00_21590 3bc71c6a8ade70ce99505346d9bcaae3 676 SUPERFAMILY SSF55785 341 451 6.93E-16 T 13-10-2018 IPR035965 PAS domain superfamily COP00_12770 817dcda79d1b2e4cc815009cacd926e1 199 Gene3D G3DSA:2.30.110.10 4 199 4.7E-40 T 13-10-2018 IPR012349 FMN-binding split barrel GO:0048037 COP00_12770 817dcda79d1b2e4cc815009cacd926e1 199 Pfam PF01613 Flavin reductase like domain 15 189 7.0E-9 T 13-10-2018 IPR002563 Flavin reductase like domain GO:0010181 COP00_12770 817dcda79d1b2e4cc815009cacd926e1 199 SUPERFAMILY SSF50475 6 193 2.3E-30 T 13-10-2018 COP00_15625 bafd34111c93235bf7dab4f30fc4458b 200 SUPERFAMILY SSF46894 125 200 4.08E-21 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 COP00_15625 bafd34111c93235bf7dab4f30fc4458b 200 Pfam PF00196 Bacterial regulatory proteins, luxR family 139 194 3.1E-21 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 COP00_15625 bafd34111c93235bf7dab4f30fc4458b 200 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 140 154 4.8E-13 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 COP00_15625 bafd34111c93235bf7dab4f30fc4458b 200 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 154 170 4.8E-13 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 COP00_15625 bafd34111c93235bf7dab4f30fc4458b 200 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 170 182 4.8E-13 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 COP00_15625 bafd34111c93235bf7dab4f30fc4458b 200 SMART SM00421 137 194 1.1E-25 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 COP00_15625 bafd34111c93235bf7dab4f30fc4458b 200 SMART SM00448 2 115 7.4E-27 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 COP00_15625 bafd34111c93235bf7dab4f30fc4458b 200 SUPERFAMILY SSF52172 1 128 1.57E-29 T 13-10-2018 IPR011006 CheY-like superfamily COP00_15625 bafd34111c93235bf7dab4f30fc4458b 200 Pfam PF00072 Response regulator receiver domain 5 116 1.5E-24 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 COP00_15625 bafd34111c93235bf7dab4f30fc4458b 200 Gene3D G3DSA:3.40.50.12740 2 200 1.1E-59 T 13-10-2018 COP00_16645 abb6bb457290dd9ccfb0efb7bedc3eac 1199 Gene3D G3DSA:1.10.1790.20 950 1128 1.7E-67 T 13-10-2018 COP00_16645 abb6bb457290dd9ccfb0efb7bedc3eac 1199 Pfam PF04997 RNA polymerase Rpb1, domain 1 6 331 3.2E-90 T 13-10-2018 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 COP00_16645 abb6bb457290dd9ccfb0efb7bedc3eac 1199 SUPERFAMILY SSF64484 5 1182 0.0 T 13-10-2018 COP00_16645 abb6bb457290dd9ccfb0efb7bedc3eac 1199 SMART SM00663 224 503 1.5E-186 T 13-10-2018 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 COP00_16645 abb6bb457290dd9ccfb0efb7bedc3eac 1199 Gene3D G3DSA:1.10.132.30 660 794 6.8E-60 T 13-10-2018 IPR038120 RNA polymerase Rpb1, funnel domain superfamily KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 COP00_16645 abb6bb457290dd9ccfb0efb7bedc3eac 1199 Gene3D G3DSA:1.10.150.390 1130 1190 3.7E-28 T 13-10-2018 COP00_16645 abb6bb457290dd9ccfb0efb7bedc3eac 1199 Pfam PF04998 RNA polymerase Rpb1, domain 5 770 1129 1.5E-67 T 13-10-2018 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 COP00_16645 abb6bb457290dd9ccfb0efb7bedc3eac 1199 Pfam PF04983 RNA polymerase Rpb1, domain 3 478 663 2.0E-35 T 13-10-2018 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 COP00_16645 abb6bb457290dd9ccfb0efb7bedc3eac 1199 Gene3D G3DSA:1.10.274.100 479 659 1.4E-48 T 13-10-2018 COP00_16645 abb6bb457290dd9ccfb0efb7bedc3eac 1199 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 10 1181 0.0 T 13-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 COP00_16645 abb6bb457290dd9ccfb0efb7bedc3eac 1199 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 4 1195 18.804 T 13-10-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 COP00_16645 abb6bb457290dd9ccfb0efb7bedc3eac 1199 Gene3D G3DSA:1.10.40.90 363 405 1.3E-23 T 13-10-2018 COP00_16645 abb6bb457290dd9ccfb0efb7bedc3eac 1199 Pfam PF05000 RNA polymerase Rpb1, domain 4 692 759 2.0E-14 T 13-10-2018 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 COP00_16645 abb6bb457290dd9ccfb0efb7bedc3eac 1199 Pfam PF00623 RNA polymerase Rpb1, domain 2 333 386 1.8E-9 T 13-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 COP00_16645 abb6bb457290dd9ccfb0efb7bedc3eac 1199 Pfam PF00623 RNA polymerase Rpb1, domain 2 378 474 2.0E-29 T 13-10-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 COP00_16645 abb6bb457290dd9ccfb0efb7bedc3eac 1199 Gene3D G3DSA:2.40.50.100 966 1029 1.7E-67 T 13-10-2018 COP00_10625 3e01056d669e33fa00579b28afd00df5 198 SUPERFAMILY SSF56524 13 198 1.96E-64 T 13-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 COP00_10625 3e01056d669e33fa00579b28afd00df5 198 Pfam PF00174 Oxidoreductase molybdopterin binding domain 32 178 4.0E-38 T 13-10-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 COP00_10625 3e01056d669e33fa00579b28afd00df5 198 Gene3D G3DSA:3.90.420.10 10 196 7.1E-50 T 13-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 COP00_22410 7eb3c30f1ef9b07da01c1bb37606e3da 80 ProDom PD059966 COTJA SPORE PROTEIN-RELATED COAT-ASSOCIATED COTJAA JA 11 76 3.0E-31 T 13-10-2018 IPR020256 Spore coat protein CotJA COP00_22410 7eb3c30f1ef9b07da01c1bb37606e3da 80 Pfam PF11007 Spore coat associated protein JA (CotJA) 34 69 1.8E-11 T 13-10-2018 IPR020256 Spore coat protein CotJA COP00_11100 d4a73c0784f5738f873bf22510541414 285 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 COP00_11100 d4a73c0784f5738f873bf22510541414 285 Gene3D G3DSA:3.40.50.720 3 261 5.8E-71 T 13-10-2018 COP00_11100 d4a73c0784f5738f873bf22510541414 285 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 3.0E-11 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_11100 d4a73c0784f5738f873bf22510541414 285 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 3.0E-11 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_11100 d4a73c0784f5738f873bf22510541414 285 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 3.0E-11 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_11100 d4a73c0784f5738f873bf22510541414 285 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 4 183 0.0081 T 13-10-2018 COP00_11100 d4a73c0784f5738f873bf22510541414 285 SUPERFAMILY SSF51735 2 243 6.18E-65 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily COP00_11100 d4a73c0784f5738f873bf22510541414 285 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 1.8E-28 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_11100 d4a73c0784f5738f873bf22510541414 285 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 1.8E-28 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_11100 d4a73c0784f5738f873bf22510541414 285 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 1.8E-28 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_11100 d4a73c0784f5738f873bf22510541414 285 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 1.8E-28 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_11100 d4a73c0784f5738f873bf22510541414 285 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 1.8E-28 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_11100 d4a73c0784f5738f873bf22510541414 285 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 221 241 1.8E-28 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_11100 d4a73c0784f5738f873bf22510541414 285 Pfam PF00106 short chain dehydrogenase 4 193 4.8E-50 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_04330 445111c962098478e8b06974cc06d4f6 493 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 24 140 9.5E-22 T 13-10-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 COP00_04330 445111c962098478e8b06974cc06d4f6 493 Gene3D G3DSA:1.10.1060.10 8 152 1.9E-20 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 COP00_04330 445111c962098478e8b06974cc06d4f6 493 PRINTS PR00419 Adrenodoxin reductase family signature 295 309 8.1E-26 T 13-10-2018 COP00_04330 445111c962098478e8b06974cc06d4f6 493 PRINTS PR00419 Adrenodoxin reductase family signature 219 229 8.1E-26 T 13-10-2018 COP00_04330 445111c962098478e8b06974cc06d4f6 493 PRINTS PR00419 Adrenodoxin reductase family signature 177 190 8.1E-26 T 13-10-2018 COP00_04330 445111c962098478e8b06974cc06d4f6 493 PRINTS PR00419 Adrenodoxin reductase family signature 154 176 8.1E-26 T 13-10-2018 COP00_04330 445111c962098478e8b06974cc06d4f6 493 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 153 475 1.5E-26 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 COP00_04330 445111c962098478e8b06974cc06d4f6 493 SUPERFAMILY SSF46548 2 163 1.99E-36 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 COP00_04330 445111c962098478e8b06974cc06d4f6 493 Gene3D G3DSA:3.50.50.60 281 487 2.4E-16 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily COP00_04330 445111c962098478e8b06974cc06d4f6 493 SUPERFAMILY SSF51971 151 421 3.53E-62 T 13-10-2018 COP00_04330 445111c962098478e8b06974cc06d4f6 493 TIGRFAM TIGR01317 GOGAT_sm_gam: glutamate synthase, NADH/NADPH, small subunit 3 493 2.4E-251 T 13-10-2018 IPR006005 Glutamate synthase, NADH/NADPH, small subunit 1 GO:0006537|GO:0016639|GO:0055114 COP00_04330 445111c962098478e8b06974cc06d4f6 493 Gene3D G3DSA:3.50.50.60 153 279 4.0E-35 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily COP00_14090 b16c3a3e3cc2a0e2e228b40dfa8df151 432 SUPERFAMILY SSF109604 5 414 2.62E-121 T 13-10-2018 COP00_14090 b16c3a3e3cc2a0e2e228b40dfa8df151 432 Pfam PF01966 HD domain 61 181 3.4E-18 T 13-10-2018 IPR006674 HD domain COP00_14090 b16c3a3e3cc2a0e2e228b40dfa8df151 432 Gene3D G3DSA:1.10.3210.10 11 401 3.9E-169 T 13-10-2018 COP00_14090 b16c3a3e3cc2a0e2e228b40dfa8df151 432 Gene3D G3DSA:1.20.1250.30 235 412 3.9E-169 T 13-10-2018 COP00_14090 b16c3a3e3cc2a0e2e228b40dfa8df151 432 SMART SM00471 57 187 2.2E-13 T 13-10-2018 IPR003607 HD/PDEase domain COP00_00350 4eaa9e77dc114de7a770a61ae4d532ba 374 SUPERFAMILY SSF53187 3 369 1.13E-66 T 13-10-2018 COP00_00350 4eaa9e77dc114de7a770a61ae4d532ba 374 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 6 361 5.1E-86 T 13-10-2018 IPR017439 Amidohydrolase GO:0016787 COP00_00350 4eaa9e77dc114de7a770a61ae4d532ba 374 Gene3D G3DSA:3.30.70.360 173 287 4.9E-116 T 13-10-2018 COP00_00350 4eaa9e77dc114de7a770a61ae4d532ba 374 PIRSF PIRSF005962 1 374 2.8E-107 T 13-10-2018 IPR017439 Amidohydrolase GO:0016787 COP00_00350 4eaa9e77dc114de7a770a61ae4d532ba 374 Pfam PF01546 Peptidase family M20/M25/M40 66 370 3.1E-21 T 13-10-2018 IPR002933 Peptidase M20 GO:0016787 COP00_00350 4eaa9e77dc114de7a770a61ae4d532ba 374 SUPERFAMILY SSF55031 178 282 8.24E-28 T 13-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain COP00_00350 4eaa9e77dc114de7a770a61ae4d532ba 374 Hamap MF_01692 N-acetyldiaminopimelate deacetylase. 3 372 60.45 T 13-10-2018 IPR023905 Acetyldiaminopimelate deacetylase GO:0009089|GO:0050118 KEGG: 00300+3.5.1.47|MetaCyc: PWY-2941 COP00_00350 4eaa9e77dc114de7a770a61ae4d532ba 374 Pfam PF07687 Peptidase dimerisation domain 179 270 7.5E-11 T 13-10-2018 IPR011650 Peptidase M20, dimerisation domain COP00_00350 4eaa9e77dc114de7a770a61ae4d532ba 374 Gene3D G3DSA:3.40.630.10 7 358 4.9E-116 T 13-10-2018 COP00_01590 b24370212ff334b76ba07afd53ebc18f 116 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 3 107 28.388 T 13-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 COP00_01590 b24370212ff334b76ba07afd53ebc18f 116 Gene3D G3DSA:3.30.300.20 1 116 5.1E-40 T 13-10-2018 IPR015946 K homology domain-like, alpha/beta COP00_01590 b24370212ff334b76ba07afd53ebc18f 116 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 7 94 2.0E-42 T 13-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 COP00_01590 b24370212ff334b76ba07afd53ebc18f 116 Pfam PF02033 Ribosome-binding factor A 4 107 9.5E-35 T 13-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 COP00_01590 b24370212ff334b76ba07afd53ebc18f 116 SUPERFAMILY SSF89919 2 110 1.83E-36 T 13-10-2018 IPR023799 Ribosome-binding factor A domain superfamily COP00_01590 b24370212ff334b76ba07afd53ebc18f 116 ProSitePatterns PS01319 Ribosome-binding factor A signature. 73 94 - T 13-10-2018 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 COP00_01590 b24370212ff334b76ba07afd53ebc18f 116 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 3 112 1.2E-43 T 13-10-2018 IPR000238 Ribosome-binding factor A GO:0006364 COP00_11315 7f7b7470009fa2cd55f10de334527087 156 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 1 153 1.6E-33 T 13-10-2018 IPR007404 LexA-binding, inner membrane-associated putative hydrolase COP00_11315 7f7b7470009fa2cd55f10de334527087 156 PIRSF PIRSF030780 1 155 1.3E-20 T 13-10-2018 IPR016956 Inner membrane protein YdjM COP00_10270 d5980b5649c31429b30453f208ab25b9 561 SUPERFAMILY SSF51011 477 554 2.88E-16 T 13-10-2018 COP00_10270 d5980b5649c31429b30453f208ab25b9 561 SMART SM00642 13 416 4.6E-160 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 COP00_10270 d5980b5649c31429b30453f208ab25b9 561 PRINTS PR00110 Alpha-amylase signature 317 329 1.5E-5 T 13-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 COP00_10270 d5980b5649c31429b30453f208ab25b9 561 PRINTS PR00110 Alpha-amylase signature 92 103 1.5E-5 T 13-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 COP00_10270 d5980b5649c31429b30453f208ab25b9 561 PRINTS PR00110 Alpha-amylase signature 193 204 1.5E-5 T 13-10-2018 IPR006046 Alpha amylase GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+3.2.1.1|Reactome: R-HSA-189085 COP00_10270 d5980b5649c31429b30453f208ab25b9 561 Gene3D G3DSA:3.20.20.80 172 477 3.7E-118 T 13-10-2018 COP00_10270 d5980b5649c31429b30453f208ab25b9 561 Gene3D G3DSA:3.20.20.80 1 109 1.8E-46 T 13-10-2018 COP00_10270 d5980b5649c31429b30453f208ab25b9 561 Pfam PF00128 Alpha amylase, catalytic domain 28 373 1.8E-112 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 COP00_10270 d5980b5649c31429b30453f208ab25b9 561 Pfam PF16657 Maltogenic Amylase, C-terminal domain 477 550 5.2E-9 T 13-10-2018 IPR032091 Maltogenic Amylase, C-terminal COP00_10270 d5980b5649c31429b30453f208ab25b9 561 Gene3D G3DSA:2.60.40.1180 478 555 2.3E-18 T 13-10-2018 IPR013780 Glycosyl hydrolase, all-beta COP00_10270 d5980b5649c31429b30453f208ab25b9 561 SUPERFAMILY SSF51445 3 474 2.51E-153 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily COP00_10270 d5980b5649c31429b30453f208ab25b9 561 Gene3D G3DSA:3.90.400.10 110 171 1.4E-34 T 13-10-2018 COP00_03490 b62a8729ce4a4d0940114cdf0fc7825d 111 Pfam PF00893 Small Multidrug Resistance protein 1 89 2.0E-20 T 13-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 COP00_03490 b62a8729ce4a4d0940114cdf0fc7825d 111 Gene3D G3DSA:1.10.3730.20 1 105 1.8E-20 T 13-10-2018 COP00_03490 b62a8729ce4a4d0940114cdf0fc7825d 111 SUPERFAMILY SSF103481 5 99 7.98E-13 T 13-10-2018 COP00_20795 34969d06800de46fb327f954ac749026 303 Pfam PF00326 Prolyl oligopeptidase family 104 298 2.1E-7 T 13-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 COP00_20795 34969d06800de46fb327f954ac749026 303 Gene3D G3DSA:3.40.50.1820 54 302 1.9E-37 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold COP00_20795 34969d06800de46fb327f954ac749026 303 SUPERFAMILY SSF53474 55 298 1.58E-44 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold COP00_05920 d36e1364fa5c50a90262f87073bfebdf 178 SUPERFAMILY SSF52833 9 170 5.8E-46 T 13-10-2018 IPR036249 Thioredoxin-like superfamily COP00_05920 d36e1364fa5c50a90262f87073bfebdf 178 Gene3D G3DSA:3.40.30.10 25 176 8.7E-49 T 13-10-2018 COP00_05920 d36e1364fa5c50a90262f87073bfebdf 178 Pfam PF00578 AhpC/TSA family 39 152 8.0E-37 T 13-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 COP00_05920 d36e1364fa5c50a90262f87073bfebdf 178 Hamap MF_01319 Thiol-disulfide oxidoreductase ResA [resA]. 1 174 47.018 T 13-10-2018 IPR023555 Thiol-disulphide oxidoreductase ResA GO:0005886|GO:0015036|GO:0017004 COP00_05920 d36e1364fa5c50a90262f87073bfebdf 178 ProSitePatterns PS00194 Thioredoxin family active site. 66 84 - T 13-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 COP00_17960 1b0cca3cf6e7f1408ceba2598413f5b4 295 SMART SM00382 26 212 5.6E-14 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_17960 1b0cca3cf6e7f1408ceba2598413f5b4 295 SUPERFAMILY SSF52540 2 228 3.94E-55 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_17960 1b0cca3cf6e7f1408ceba2598413f5b4 295 ProSitePatterns PS00211 ABC transporters family signature. 128 142 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 COP00_17960 1b0cca3cf6e7f1408ceba2598413f5b4 295 Pfam PF00005 ABC transporter 19 156 6.7E-29 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 COP00_17960 1b0cca3cf6e7f1408ceba2598413f5b4 295 Gene3D G3DSA:3.40.50.300 1 230 3.6E-55 T 13-10-2018 COP00_16755 3e848a099aa69c45c22ee0d774142c96 178 Gene3D G3DSA:3.90.930.12 83 178 6.7E-40 T 13-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 COP00_16755 3e848a099aa69c45c22ee0d774142c96 178 Pfam PF00347 Ribosomal protein L6 11 82 2.0E-25 T 13-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 COP00_16755 3e848a099aa69c45c22ee0d774142c96 178 Pfam PF00347 Ribosomal protein L6 90 164 6.0E-21 T 13-10-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 COP00_16755 3e848a099aa69c45c22ee0d774142c96 178 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 13-10-2018 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 COP00_16755 3e848a099aa69c45c22ee0d774142c96 178 PIRSF PIRSF002162 1 177 1.1E-49 T 13-10-2018 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 COP00_16755 3e848a099aa69c45c22ee0d774142c96 178 SUPERFAMILY SSF56053 83 176 1.78E-34 T 13-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 COP00_16755 3e848a099aa69c45c22ee0d774142c96 178 SUPERFAMILY SSF56053 1 82 5.28E-30 T 13-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 COP00_16755 3e848a099aa69c45c22ee0d774142c96 178 PRINTS PR00059 Ribosomal protein L6 signature 71 96 7.6E-34 T 13-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 COP00_16755 3e848a099aa69c45c22ee0d774142c96 178 PRINTS PR00059 Ribosomal protein L6 signature 141 162 7.6E-34 T 13-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 COP00_16755 3e848a099aa69c45c22ee0d774142c96 178 PRINTS PR00059 Ribosomal protein L6 signature 99 115 7.6E-34 T 13-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 COP00_16755 3e848a099aa69c45c22ee0d774142c96 178 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 39.001 T 13-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 COP00_16755 3e848a099aa69c45c22ee0d774142c96 178 Gene3D G3DSA:3.90.930.12 1 82 4.1E-33 T 13-10-2018 IPR036789 Ribosomal protein L6, alpha-beta domain superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 COP00_16755 3e848a099aa69c45c22ee0d774142c96 178 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 9.8E-77 T 13-10-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 COP00_07740 276875c8074b16b1c6a4cc49985b8a95 349 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 307 3.1E-27 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 COP00_07740 276875c8074b16b1c6a4cc49985b8a95 349 Hamap MF_01685 Ferredoxin--NADP reductase. 6 333 37.188 T 13-10-2018 IPR022890 Ferredoxin--NADP reductase, type 2 GO:0004324|GO:0055114 KEGG: 00195+1.18.1.2|MetaCyc: PWY-101 COP00_07740 276875c8074b16b1c6a4cc49985b8a95 349 Gene3D G3DSA:3.50.50.60 6 309 3.5E-86 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily COP00_07740 276875c8074b16b1c6a4cc49985b8a95 349 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 111 129 9.5E-18 T 13-10-2018 COP00_07740 276875c8074b16b1c6a4cc49985b8a95 349 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 155 173 9.5E-18 T 13-10-2018 COP00_07740 276875c8074b16b1c6a4cc49985b8a95 349 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 9.5E-18 T 13-10-2018 COP00_07740 276875c8074b16b1c6a4cc49985b8a95 349 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 270 292 9.5E-18 T 13-10-2018 COP00_07740 276875c8074b16b1c6a4cc49985b8a95 349 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 241 257 9.5E-18 T 13-10-2018 COP00_07740 276875c8074b16b1c6a4cc49985b8a95 349 Gene3D G3DSA:3.50.50.60 127 248 3.5E-86 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily COP00_07740 276875c8074b16b1c6a4cc49985b8a95 349 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 8 30 1.2E-23 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 COP00_07740 276875c8074b16b1c6a4cc49985b8a95 349 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 64 74 1.2E-23 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 COP00_07740 276875c8074b16b1c6a4cc49985b8a95 349 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 112 120 1.2E-23 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 COP00_07740 276875c8074b16b1c6a4cc49985b8a95 349 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 280 298 1.2E-23 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 COP00_07740 276875c8074b16b1c6a4cc49985b8a95 349 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 151 175 1.2E-23 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 COP00_07740 276875c8074b16b1c6a4cc49985b8a95 349 SUPERFAMILY SSF51905 1 319 8.29E-41 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily COP00_06350 87e8fdede41bb542106c4ac5270689ed 325 SMART SM00849 19 231 4.4E-23 T 13-10-2018 IPR001279 Metallo-beta-lactamase COP00_06350 87e8fdede41bb542106c4ac5270689ed 325 Pfam PF00753 Metallo-beta-lactamase superfamily 18 231 3.5E-19 T 13-10-2018 IPR001279 Metallo-beta-lactamase COP00_06350 87e8fdede41bb542106c4ac5270689ed 325 SUPERFAMILY SSF56281 14 309 2.62E-45 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like COP00_06350 87e8fdede41bb542106c4ac5270689ed 325 Gene3D G3DSA:3.60.15.10 3 259 1.7E-48 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like COP00_09140 2d297a68380ed28198f9967f8806c238 1114 Gene3D G3DSA:3.20.20.140 1 261 2.8E-73 T 13-10-2018 COP00_09140 2d297a68380ed28198f9967f8806c238 1114 SUPERFAMILY SSF89550 3 254 1.55E-14 T 13-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 COP00_09140 2d297a68380ed28198f9967f8806c238 1114 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 283 704 1.5E-174 T 13-10-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 COP00_09140 2d297a68380ed28198f9967f8806c238 1114 Gene3D G3DSA:1.10.150.870 762 851 4.2E-8 T 13-10-2018 COP00_09140 2d297a68380ed28198f9967f8806c238 1114 Pfam PF01336 OB-fold nucleic acid binding domain 965 1028 1.0E-8 T 13-10-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 COP00_09140 2d297a68380ed28198f9967f8806c238 1114 Gene3D G3DSA:1.10.10.1600 415 491 3.6E-24 T 13-10-2018 COP00_09140 2d297a68380ed28198f9967f8806c238 1114 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 3 992 0.0 T 13-10-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 COP00_09140 2d297a68380ed28198f9967f8806c238 1114 SMART SM00481 4 71 5.1E-26 T 13-10-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal COP00_09140 2d297a68380ed28198f9967f8806c238 1114 Pfam PF14579 Helix-hairpin-helix motif 778 865 8.2E-25 T 13-10-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 COP00_09140 2d297a68380ed28198f9967f8806c238 1114 Pfam PF02811 PHP domain 5 165 6.5E-35 T 13-10-2018 IPR004013 PHP domain GO:0003824 COP00_07270 acd6569fbd5fc07628b789d06f4a1bf4 439 Gene3D G3DSA:2.40.50.140 378 439 9.5E-8 T 13-10-2018 COP00_07270 acd6569fbd5fc07628b789d06f4a1bf4 439 SUPERFAMILY SSF141322 381 438 4.18E-5 T 13-10-2018 COP00_07270 acd6569fbd5fc07628b789d06f4a1bf4 439 Pfam PF01957 NfeD-like C-terminal, partner-binding 290 438 5.2E-18 T 13-10-2018 IPR002810 NfeD-like, C-terminal domain COP00_07270 acd6569fbd5fc07628b789d06f4a1bf4 439 Gene3D G3DSA:3.90.226.10 28 237 6.7E-50 T 13-10-2018 COP00_07270 acd6569fbd5fc07628b789d06f4a1bf4 439 Pfam PF01972 Serine dehydrogenase proteinase 64 127 1.5E-6 T 13-10-2018 IPR002825 Peptidase S49, serine-peptidase prokaryotes GO:0016021 COP00_07270 acd6569fbd5fc07628b789d06f4a1bf4 439 SUPERFAMILY SSF52096 33 177 3.87E-25 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily COP00_01895 706c669a6431a1dbec6aeebe87c7efba 303 SUPERFAMILY SSF75005 20 301 1.23E-65 T 13-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily COP00_01895 706c669a6431a1dbec6aeebe87c7efba 303 PIRSF PIRSF026534 2 303 3.1E-103 T 13-10-2018 IPR016840 Glycoside hydrolase, family 43, endo-1, 5-alpha-L-arabinosidase GO:0046558 COP00_01895 706c669a6431a1dbec6aeebe87c7efba 303 Gene3D G3DSA:2.115.10.20 13 303 4.1E-86 T 13-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily COP00_01895 706c669a6431a1dbec6aeebe87c7efba 303 Pfam PF04616 Glycosyl hydrolases family 43 23 270 1.4E-46 T 13-10-2018 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 COP00_14500 8df1612de3b203680c043447d9085745 317 SUPERFAMILY SSF144052 1 313 2.62E-62 T 13-10-2018 COP00_14500 8df1612de3b203680c043447d9085745 317 Pfam PF02073 Thermophilic metalloprotease (M29) 121 277 9.4E-11 T 13-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 COP00_05535 e016ba907d3c3fb0e1afb8bc8bb5ed3d 397 Pfam PF13735 tRNA nucleotidyltransferase domain 2 putative 244 390 1.7E-37 T 13-10-2018 IPR032810 CCA-adding enzyme, C-terminal COP00_05535 e016ba907d3c3fb0e1afb8bc8bb5ed3d 397 Gene3D G3DSA:3.30.460.10 2 144 9.4E-53 T 13-10-2018 COP00_05535 e016ba907d3c3fb0e1afb8bc8bb5ed3d 397 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 170 227 1.7E-14 T 13-10-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 COP00_05535 e016ba907d3c3fb0e1afb8bc8bb5ed3d 397 Gene3D G3DSA:1.20.58.560 242 338 6.5E-13 T 13-10-2018 COP00_05535 e016ba907d3c3fb0e1afb8bc8bb5ed3d 397 Gene3D G3DSA:1.10.246.80 339 397 7.5E-20 T 13-10-2018 COP00_05535 e016ba907d3c3fb0e1afb8bc8bb5ed3d 397 Gene3D G3DSA:1.10.110.30 145 240 2.2E-29 T 13-10-2018 COP00_05535 e016ba907d3c3fb0e1afb8bc8bb5ed3d 397 SUPERFAMILY SSF81891 140 394 1.27E-48 T 13-10-2018 COP00_05535 e016ba907d3c3fb0e1afb8bc8bb5ed3d 397 Pfam PF01743 Poly A polymerase head domain 22 141 1.1E-37 T 13-10-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 COP00_05535 e016ba907d3c3fb0e1afb8bc8bb5ed3d 397 SUPERFAMILY SSF81301 5 139 1.63E-42 T 13-10-2018 COP00_05535 e016ba907d3c3fb0e1afb8bc8bb5ed3d 397 Hamap MF_01263 CCA-adding enzyme [cca]. 2 395 40.61 T 13-10-2018 IPR023068 CCA-adding enzyme, firmicutes GO:0001680|GO:0004810|GO:0016437 COP00_01150 201bfd9fb66f101c76b218a07f956ce8 218 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 133 155 - T 13-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 COP00_01150 201bfd9fb66f101c76b218a07f956ce8 218 SUPERFAMILY SSF51366 2 214 1.82E-76 T 13-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 COP00_01150 201bfd9fb66f101c76b218a07f956ce8 218 Gene3D G3DSA:3.20.20.70 1 218 2.6E-90 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 COP00_01150 201bfd9fb66f101c76b218a07f956ce8 218 Pfam PF00834 Ribulose-phosphate 3 epimerase family 4 201 1.4E-92 T 13-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 COP00_01150 201bfd9fb66f101c76b218a07f956ce8 218 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 31 45 - T 13-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 COP00_01150 201bfd9fb66f101c76b218a07f956ce8 218 PIRSF PIRSF001461 1 218 1.7E-99 T 13-10-2018 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 COP00_01150 201bfd9fb66f101c76b218a07f956ce8 218 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 4 214 2.9E-96 T 13-10-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 COP00_02090 d363137e8f8f7143f4101724111aa9d9 314 Pfam PF01715 IPP transferase 41 285 3.7E-85 T 13-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 COP00_02090 d363137e8f8f7143f4101724111aa9d9 314 SUPERFAMILY SSF52540 7 232 9.7E-9 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_02090 d363137e8f8f7143f4101724111aa9d9 314 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 8 306 30.588 T 13-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 COP00_02090 d363137e8f8f7143f4101724111aa9d9 314 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 8 293 6.9E-116 T 13-10-2018 IPR018022 IPP transferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 COP00_02090 d363137e8f8f7143f4101724111aa9d9 314 Gene3D G3DSA:3.40.50.300 12 290 2.8E-103 T 13-10-2018 COP00_02090 d363137e8f8f7143f4101724111aa9d9 314 SUPERFAMILY SSF52540 8 152 4.36E-17 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_02090 d363137e8f8f7143f4101724111aa9d9 314 Gene3D G3DSA:1.10.20.140 115 187 2.8E-103 T 13-10-2018 COP00_23595 f54b3b1c7660135415c3cfffca5707bc 212 Gene3D G3DSA:3.40.630.100 3 211 3.6E-61 T 13-10-2018 IPR038128 Poly-gamma-glutamate hydrolase superfamily COP00_23595 f54b3b1c7660135415c3cfffca5707bc 212 Pfam PF05908 Poly-gamma-glutamate hydrolase 9 200 4.0E-70 T 13-10-2018 IPR008585 Poly-gamma-glutamate hydrolase COP00_15535 8b6d9c38eba05b1fb30173a8aa10358e 442 Pfam PF00672 HAMP domain 153 202 2.8E-8 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 COP00_15535 8b6d9c38eba05b1fb30173a8aa10358e 442 Gene3D G3DSA:1.20.1480.50 121 207 1.5E-6 T 13-10-2018 COP00_15535 8b6d9c38eba05b1fb30173a8aa10358e 442 SUPERFAMILY SSF47384 197 278 1.96E-15 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 COP00_15535 8b6d9c38eba05b1fb30173a8aa10358e 442 Pfam PF00512 His Kinase A (phospho-acceptor) domain 214 278 5.3E-12 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 COP00_15535 8b6d9c38eba05b1fb30173a8aa10358e 442 SUPERFAMILY SSF55874 269 436 6.02E-41 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily COP00_15535 8b6d9c38eba05b1fb30173a8aa10358e 442 Gene3D G3DSA:1.10.287.130 208 284 1.8E-15 T 13-10-2018 COP00_15535 8b6d9c38eba05b1fb30173a8aa10358e 442 SMART SM00388 213 280 2.1E-11 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 COP00_15535 8b6d9c38eba05b1fb30173a8aa10358e 442 Gene3D G3DSA:3.30.565.10 285 441 2.9E-40 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily COP00_15535 8b6d9c38eba05b1fb30173a8aa10358e 442 SMART SM00387 326 438 4.2E-34 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase COP00_15535 8b6d9c38eba05b1fb30173a8aa10358e 442 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 326 437 9.3E-23 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase COP00_15535 8b6d9c38eba05b1fb30173a8aa10358e 442 PRINTS PR00344 Bacterial sensor protein C-terminal signature 398 416 2.4E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 COP00_15535 8b6d9c38eba05b1fb30173a8aa10358e 442 PRINTS PR00344 Bacterial sensor protein C-terminal signature 381 391 2.4E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 COP00_15535 8b6d9c38eba05b1fb30173a8aa10358e 442 PRINTS PR00344 Bacterial sensor protein C-terminal signature 363 377 2.4E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 COP00_15535 8b6d9c38eba05b1fb30173a8aa10358e 442 SMART SM00304 153 205 1.0E-10 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 COP00_15535 8b6d9c38eba05b1fb30173a8aa10358e 442 SUPERFAMILY SSF158472 153 203 1.7E-7 T 13-10-2018 COP00_18525 ced7d2298e3089cb61a5dabec8814e57 578 SMART SM00710 138 160 5.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat COP00_18525 ced7d2298e3089cb61a5dabec8814e57 578 SMART SM00710 379 400 200.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat COP00_18525 ced7d2298e3089cb61a5dabec8814e57 578 SMART SM00710 100 137 6400.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat COP00_18525 ced7d2298e3089cb61a5dabec8814e57 578 SMART SM00710 191 220 16.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat COP00_18525 ced7d2298e3089cb61a5dabec8814e57 578 SMART SM00710 307 327 1300.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat COP00_18525 ced7d2298e3089cb61a5dabec8814e57 578 SMART SM00710 254 276 2600.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat COP00_18525 ced7d2298e3089cb61a5dabec8814e57 578 SMART SM00710 351 378 3500.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat COP00_18525 ced7d2298e3089cb61a5dabec8814e57 578 SMART SM00710 328 350 25.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat COP00_18525 ced7d2298e3089cb61a5dabec8814e57 578 SMART SM00710 450 472 630.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat COP00_18525 ced7d2298e3089cb61a5dabec8814e57 578 SMART SM00710 168 190 4.2 T 13-10-2018 IPR006626 Parallel beta-helix repeat COP00_18525 ced7d2298e3089cb61a5dabec8814e57 578 SMART SM00710 231 253 950.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat COP00_18525 ced7d2298e3089cb61a5dabec8814e57 578 SMART SM00710 523 545 1000.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat COP00_18525 ced7d2298e3089cb61a5dabec8814e57 578 SUPERFAMILY SSF51126 4 285 8.53E-35 T 13-10-2018 IPR011050 Pectin lyase fold/virulence factor COP00_18525 ced7d2298e3089cb61a5dabec8814e57 578 SUPERFAMILY SSF51126 276 480 1.44E-13 T 13-10-2018 IPR011050 Pectin lyase fold/virulence factor COP00_18525 ced7d2298e3089cb61a5dabec8814e57 578 Pfam PF12708 Pectate lyase superfamily protein 7 263 6.6E-11 T 13-10-2018 IPR024535 Pectate lyase superfamily protein COP00_18525 ced7d2298e3089cb61a5dabec8814e57 578 Gene3D G3DSA:2.160.20.10 6 330 3.2E-42 T 13-10-2018 IPR012334 Pectin lyase fold COP00_18525 ced7d2298e3089cb61a5dabec8814e57 578 Pfam PF13229 Right handed beta helix region 304 430 4.1E-13 T 13-10-2018 IPR039448 Right handed beta helix domain COP00_18525 ced7d2298e3089cb61a5dabec8814e57 578 Gene3D G3DSA:2.160.20.10 394 577 1.9E-10 T 13-10-2018 IPR012334 Pectin lyase fold COP00_06805 fbbbb3632bba13690e1dedaedd0dec8d 345 Gene3D G3DSA:1.20.81.30 7 116 1.6E-12 T 13-10-2018 COP00_06805 fbbbb3632bba13690e1dedaedd0dec8d 345 PRINTS PR00812 Bacterial general secretion pathway protein F signature 108 136 1.2E-6 T 13-10-2018 IPR003004 GspF/PilC family COP00_06805 fbbbb3632bba13690e1dedaedd0dec8d 345 PRINTS PR00812 Bacterial general secretion pathway protein F signature 326 345 1.2E-6 T 13-10-2018 IPR003004 GspF/PilC family COP00_06805 fbbbb3632bba13690e1dedaedd0dec8d 345 Pfam PF00482 Type II secretion system (T2SS), protein F 217 337 5.0E-20 T 13-10-2018 IPR018076 Type II secretion system F domain COP00_06805 fbbbb3632bba13690e1dedaedd0dec8d 345 Pfam PF00482 Type II secretion system (T2SS), protein F 18 136 4.1E-8 T 13-10-2018 IPR018076 Type II secretion system F domain COP00_06805 fbbbb3632bba13690e1dedaedd0dec8d 345 Gene3D G3DSA:1.20.81.30 198 309 1.7E-12 T 13-10-2018 COP00_00905 fbcb0fcc9c5f2ec2ee4c8e9d0ec916f7 309 TIGRFAM TIGR02854 spore_II_GA: sigma-E processing peptidase SpoIIGA 3 300 3.5E-91 T 13-10-2018 IPR005081 Sigma-E processing peptidase SpoIIGA GO:0004190|GO:0006508|GO:0030436 COP00_00905 fbcb0fcc9c5f2ec2ee4c8e9d0ec916f7 309 PIRSF PIRSF018571 1 302 3.1E-95 T 13-10-2018 IPR005081 Sigma-E processing peptidase SpoIIGA GO:0004190|GO:0006508|GO:0030436 COP00_00905 fbcb0fcc9c5f2ec2ee4c8e9d0ec916f7 309 Pfam PF03419 Sporulation factor SpoIIGA 2 299 2.6E-80 T 13-10-2018 IPR005081 Sigma-E processing peptidase SpoIIGA GO:0004190|GO:0006508|GO:0030436 COP00_11875 4c15274c19af364843cb36c137da97c7 354 Pfam PF14659 Phage integrase, N-terminal SAM-like domain 57 113 1.2E-12 T 13-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 COP00_11875 4c15274c19af364843cb36c137da97c7 354 Gene3D G3DSA:1.10.150.130 53 162 1.4E-15 T 13-10-2018 IPR010998 Integrase/recombinase, N-terminal COP00_11875 4c15274c19af364843cb36c137da97c7 354 Pfam PF00589 Phage integrase family 167 337 2.3E-26 T 13-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 COP00_11875 4c15274c19af364843cb36c137da97c7 354 Gene3D G3DSA:1.10.443.10 163 351 1.6E-43 T 13-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 COP00_11875 4c15274c19af364843cb36c137da97c7 354 SUPERFAMILY SSF56349 56 344 1.12E-59 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 COP00_11875 4c15274c19af364843cb36c137da97c7 354 Pfam PF14657 Arm DNA-binding domain 11 53 3.4E-12 T 13-10-2018 IPR028259 AP2-like integrase, N-terminal domain COP00_22190 35e7ee0611c2f86c71ece317e18f194a 386 Pfam PF07687 Peptidase dimerisation domain 172 264 2.9E-7 T 13-10-2018 IPR011650 Peptidase M20, dimerisation domain COP00_22190 35e7ee0611c2f86c71ece317e18f194a 386 Gene3D G3DSA:3.30.70.360 168 282 2.6E-144 T 13-10-2018 COP00_22190 35e7ee0611c2f86c71ece317e18f194a 386 SUPERFAMILY SSF55031 168 285 1.83E-28 T 13-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain COP00_22190 35e7ee0611c2f86c71ece317e18f194a 386 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 1 362 2.2E-119 T 13-10-2018 IPR017439 Amidohydrolase GO:0016787 COP00_22190 35e7ee0611c2f86c71ece317e18f194a 386 Pfam PF01546 Peptidase family M20/M25/M40 59 370 1.4E-31 T 13-10-2018 IPR002933 Peptidase M20 GO:0016787 COP00_22190 35e7ee0611c2f86c71ece317e18f194a 386 Gene3D G3DSA:3.40.630.10 1 359 2.6E-144 T 13-10-2018 COP00_22190 35e7ee0611c2f86c71ece317e18f194a 386 SUPERFAMILY SSF53187 1 374 2.34E-86 T 13-10-2018 COP00_22190 35e7ee0611c2f86c71ece317e18f194a 386 PIRSF PIRSF005962 1 378 9.1E-130 T 13-10-2018 IPR017439 Amidohydrolase GO:0016787 COP00_12000 ef0c053b23cc221a348f200dad02e38c 346 Pfam PF04198 Putative sugar-binding domain 91 337 8.4E-77 T 13-10-2018 IPR007324 Sugar-binding domain, putative GO:0030246 COP00_12000 ef0c053b23cc221a348f200dad02e38c 346 SUPERFAMILY SSF46785 19 81 3.76E-12 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_12000 ef0c053b23cc221a348f200dad02e38c 346 Gene3D G3DSA:1.10.10.10 19 89 6.2E-16 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_12000 ef0c053b23cc221a348f200dad02e38c 346 Gene3D G3DSA:3.40.50.1360 90 339 1.2E-89 T 13-10-2018 COP00_12000 ef0c053b23cc221a348f200dad02e38c 346 SUPERFAMILY SSF100950 90 337 1.36E-69 T 13-10-2018 IPR037171 NagB/RpiA transferase-like COP00_05485 004ec19c33e6430d4991dfaa54720300 231 Gene3D G3DSA:1.10.10.630 124 200 8.9E-32 T 13-10-2018 IPR034829 DnaD-like domain superfamily COP00_05485 004ec19c33e6430d4991dfaa54720300 231 TIGRFAM TIGR01446 DnaD_dom: DnaD domain protein 129 199 3.0E-25 T 13-10-2018 IPR006343 DnaD domain COP00_05485 004ec19c33e6430d4991dfaa54720300 231 SUPERFAMILY SSF158499 130 195 2.35E-20 T 13-10-2018 IPR034829 DnaD-like domain superfamily COP00_05485 004ec19c33e6430d4991dfaa54720300 231 Gene3D G3DSA:1.10.10.10 1 115 7.5E-39 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_05485 004ec19c33e6430d4991dfaa54720300 231 Pfam PF07261 Replication initiation and membrane attachment 131 202 8.6E-25 T 13-10-2018 IPR006343 DnaD domain COP00_10335 e313d10de8834f8935624d1175b59f1a 386 SUPERFAMILY SSF53383 5 384 3.86E-122 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase COP00_10335 e313d10de8834f8935624d1175b59f1a 386 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 232 245 - T 13-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 COP00_10335 e313d10de8834f8935624d1175b59f1a 386 Pfam PF00155 Aminotransferase class I and II 30 377 2.6E-69 T 13-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 COP00_10335 e313d10de8834f8935624d1175b59f1a 386 Gene3D G3DSA:3.40.640.10 61 282 1.5E-133 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 COP00_10335 e313d10de8834f8935624d1175b59f1a 386 Gene3D G3DSA:3.90.1150.10 30 378 1.5E-133 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 COP00_01420 9245924cc757a7d158ebc194bb9106e6 120 SMART SM00448 3 115 1.6E-39 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 COP00_01420 9245924cc757a7d158ebc194bb9106e6 120 Pfam PF00072 Response regulator receiver domain 5 116 6.4E-34 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 COP00_01420 9245924cc757a7d158ebc194bb9106e6 120 SUPERFAMILY SSF52172 3 119 1.57E-39 T 13-10-2018 IPR011006 CheY-like superfamily COP00_01420 9245924cc757a7d158ebc194bb9106e6 120 Gene3D G3DSA:3.40.50.2300 2 120 4.0E-40 T 13-10-2018 COP00_24035 490a3760e1883296f66b88c37eda8326 615 Gene3D G3DSA:3.90.920.30 331 606 3.8E-81 T 13-10-2018 COP00_24035 490a3760e1883296f66b88c37eda8326 615 TIGRFAM TIGR02776 NHEJ_ligase_prk: DNA ligase D 13 592 3.2E-197 T 13-10-2018 IPR014143 DNA ligase D COP00_24035 490a3760e1883296f66b88c37eda8326 615 Pfam PF01068 ATP dependent DNA ligase domain 16 208 1.1E-29 T 13-10-2018 IPR012310 DNA ligase, ATP-dependent, central GO:0003910|GO:0005524|GO:0006281|GO:0006310 COP00_24035 490a3760e1883296f66b88c37eda8326 615 SUPERFAMILY SSF56091 13 208 2.64E-33 T 13-10-2018 COP00_24035 490a3760e1883296f66b88c37eda8326 615 TIGRFAM TIGR02779 NHEJ_ligase_lig: DNA ligase D, ligase domain 5 310 2.7E-82 T 13-10-2018 IPR014146 DNA ligase D, ligase domain COP00_24035 490a3760e1883296f66b88c37eda8326 615 TIGRFAM TIGR02778 ligD_pol: DNA ligase D, polymerase domain 324 564 6.3E-90 T 13-10-2018 IPR014145 DNA ligase D, polymerase domain COP00_24035 490a3760e1883296f66b88c37eda8326 615 Gene3D G3DSA:3.30.470.30 2 208 3.8E-35 T 13-10-2018 COP00_19090 b0321f1cea96f00fcd9b4c4f5e607114 263 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 33 253 2.5E-36 T 13-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 COP00_19090 b0321f1cea96f00fcd9b4c4f5e607114 263 PRINTS PR00046 Major sigma-70 factor signature 58 71 3.4E-9 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 COP00_19090 b0321f1cea96f00fcd9b4c4f5e607114 263 PRINTS PR00046 Major sigma-70 factor signature 206 218 3.4E-9 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 COP00_19090 b0321f1cea96f00fcd9b4c4f5e607114 263 PRINTS PR00046 Major sigma-70 factor signature 238 249 3.4E-9 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 COP00_19090 b0321f1cea96f00fcd9b4c4f5e607114 263 PRINTS PR00046 Major sigma-70 factor signature 223 238 3.4E-9 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 COP00_19090 b0321f1cea96f00fcd9b4c4f5e607114 263 Pfam PF04545 Sigma-70, region 4 202 251 5.4E-17 T 13-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 COP00_19090 b0321f1cea96f00fcd9b4c4f5e607114 263 Pfam PF04542 Sigma-70 region 2 34 103 5.6E-16 T 13-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 COP00_19090 b0321f1cea96f00fcd9b4c4f5e607114 263 TIGRFAM TIGR02980 SigBFG: RNA polymerase sigma-70 factor, sigma-B/F/G subfamily 28 253 2.3E-88 T 13-10-2018 IPR014322 RNA polymerase sigma-B/F/G type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 COP00_19090 b0321f1cea96f00fcd9b4c4f5e607114 263 SUPERFAMILY SSF88659 181 255 1.14E-16 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like COP00_19090 b0321f1cea96f00fcd9b4c4f5e607114 263 Pfam PF04539 Sigma-70 region 3 113 185 2.4E-16 T 13-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 COP00_19090 b0321f1cea96f00fcd9b4c4f5e607114 263 Gene3D G3DSA:1.20.120.1810 1 102 3.7E-16 T 13-10-2018 COP00_19090 b0321f1cea96f00fcd9b4c4f5e607114 263 SUPERFAMILY SSF88659 107 181 1.61E-13 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like COP00_19090 b0321f1cea96f00fcd9b4c4f5e607114 263 TIGRFAM TIGR02941 Sigma_B: RNA polymerase sigma-B factor 3 253 1.5E-120 T 13-10-2018 IPR014288 RNA polymerase sigma-B factor GO:0016987 COP00_19090 b0321f1cea96f00fcd9b4c4f5e607114 263 SUPERFAMILY SSF88946 4 103 1.7E-26 T 13-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 COP00_19090 b0321f1cea96f00fcd9b4c4f5e607114 263 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 223 249 - T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 COP00_19090 b0321f1cea96f00fcd9b4c4f5e607114 263 Gene3D G3DSA:1.20.140.160 106 256 2.4E-30 T 13-10-2018 COP00_05765 26fffbd604b358b9ab481d4af49f7d93 381 SUPERFAMILY SSF50249 10 109 3.57E-19 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold COP00_05765 26fffbd604b358b9ab481d4af49f7d93 381 Gene3D G3DSA:2.40.50.140 183 265 1.9E-30 T 13-10-2018 COP00_05765 26fffbd604b358b9ab481d4af49f7d93 381 Gene3D G3DSA:2.40.50.140 267 352 2.3E-28 T 13-10-2018 COP00_05765 26fffbd604b358b9ab481d4af49f7d93 381 PRINTS PR00681 Ribosomal protein S1 signature 16 34 4.1E-51 T 13-10-2018 COP00_05765 26fffbd604b358b9ab481d4af49f7d93 381 PRINTS PR00681 Ribosomal protein S1 signature 286 305 4.1E-51 T 13-10-2018 COP00_05765 26fffbd604b358b9ab481d4af49f7d93 381 PRINTS PR00681 Ribosomal protein S1 signature 81 100 4.1E-51 T 13-10-2018 COP00_05765 26fffbd604b358b9ab481d4af49f7d93 381 PRINTS PR00681 Ribosomal protein S1 signature 325 343 4.1E-51 T 13-10-2018 COP00_05765 26fffbd604b358b9ab481d4af49f7d93 381 PRINTS PR00681 Ribosomal protein S1 signature 151 171 4.1E-51 T 13-10-2018 COP00_05765 26fffbd604b358b9ab481d4af49f7d93 381 PRINTS PR00681 Ribosomal protein S1 signature 208 229 4.1E-51 T 13-10-2018 COP00_05765 26fffbd604b358b9ab481d4af49f7d93 381 PRINTS PR00681 Ribosomal protein S1 signature 105 121 4.1E-51 T 13-10-2018 COP00_05765 26fffbd604b358b9ab481d4af49f7d93 381 PRINTS PR00681 Ribosomal protein S1 signature 122 139 4.1E-51 T 13-10-2018 COP00_05765 26fffbd604b358b9ab481d4af49f7d93 381 SMART SM00316 271 342 1.7E-25 T 13-10-2018 IPR022967 RNA-binding domain, S1 COP00_05765 26fffbd604b358b9ab481d4af49f7d93 381 SMART SM00316 186 256 1.4E-29 T 13-10-2018 IPR022967 RNA-binding domain, S1 COP00_05765 26fffbd604b358b9ab481d4af49f7d93 381 SMART SM00316 100 167 1.2E-7 T 13-10-2018 IPR022967 RNA-binding domain, S1 COP00_05765 26fffbd604b358b9ab481d4af49f7d93 381 SMART SM00316 14 84 9.5E-17 T 13-10-2018 IPR022967 RNA-binding domain, S1 COP00_05765 26fffbd604b358b9ab481d4af49f7d93 381 Gene3D G3DSA:2.40.50.140 95 181 3.9E-11 T 13-10-2018 COP00_05765 26fffbd604b358b9ab481d4af49f7d93 381 SUPERFAMILY SSF50249 88 170 1.19E-14 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold COP00_05765 26fffbd604b358b9ab481d4af49f7d93 381 Gene3D G3DSA:2.40.50.140 2 94 2.5E-16 T 13-10-2018 COP00_05765 26fffbd604b358b9ab481d4af49f7d93 381 SUPERFAMILY SSF50249 186 269 4.5E-28 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold COP00_05765 26fffbd604b358b9ab481d4af49f7d93 381 SUPERFAMILY SSF50249 252 349 5.36E-25 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold COP00_05765 26fffbd604b358b9ab481d4af49f7d93 381 Pfam PF00575 S1 RNA binding domain 98 167 4.4E-15 T 13-10-2018 IPR003029 S1 domain GO:0003676 COP00_05765 26fffbd604b358b9ab481d4af49f7d93 381 Pfam PF00575 S1 RNA binding domain 269 342 1.5E-22 T 13-10-2018 IPR003029 S1 domain GO:0003676 COP00_05765 26fffbd604b358b9ab481d4af49f7d93 381 Pfam PF00575 S1 RNA binding domain 13 83 1.6E-16 T 13-10-2018 IPR003029 S1 domain GO:0003676 COP00_05765 26fffbd604b358b9ab481d4af49f7d93 381 Pfam PF00575 S1 RNA binding domain 185 256 1.5E-27 T 13-10-2018 IPR003029 S1 domain GO:0003676 COP00_01470 d3ce699068aaebfed9eb9c4f2fe16774 675 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 403 542 9.6E-16 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase COP00_01470 d3ce699068aaebfed9eb9c4f2fe16774 675 Gene3D G3DSA:1.20.120.160 1 140 1.5E-38 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 COP00_01470 d3ce699068aaebfed9eb9c4f2fe16774 675 Gene3D G3DSA:1.10.287.560 295 355 2.0E-19 T 13-10-2018 IPR037006 Histidine kinase CheA-like, homodimeric domain superfamily GO:0000155|GO:0006935 COP00_01470 d3ce699068aaebfed9eb9c4f2fe16774 675 Pfam PF01584 CheW-like domain 548 674 1.4E-27 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 COP00_01470 d3ce699068aaebfed9eb9c4f2fe16774 675 SUPERFAMILY SSF55052 162 245 3.14E-25 T 13-10-2018 IPR035891 CheY-binding domain of CheA COP00_01470 d3ce699068aaebfed9eb9c4f2fe16774 675 SUPERFAMILY SSF55874 357 541 1.27E-40 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily COP00_01470 d3ce699068aaebfed9eb9c4f2fe16774 675 SMART SM00073 3 100 9.5E-39 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 COP00_01470 d3ce699068aaebfed9eb9c4f2fe16774 675 SMART SM00387 400 543 3.4E-25 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase COP00_01470 d3ce699068aaebfed9eb9c4f2fe16774 675 Gene3D G3DSA:3.30.565.10 356 542 6.9E-60 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily COP00_01470 d3ce699068aaebfed9eb9c4f2fe16774 675 SUPERFAMILY SSF47384 296 356 3.53E-15 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 COP00_01470 d3ce699068aaebfed9eb9c4f2fe16774 675 Pfam PF02895 Signal transducing histidine kinase, homodimeric domain 296 354 1.1E-13 T 13-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 COP00_01470 d3ce699068aaebfed9eb9c4f2fe16774 675 SUPERFAMILY SSF47226 3 113 9.94E-31 T 13-10-2018 IPR036641 HPT domain superfamily GO:0000160 COP00_01470 d3ce699068aaebfed9eb9c4f2fe16774 675 Gene3D G3DSA:2.30.30.40 543 669 1.3E-39 T 13-10-2018 COP00_01470 d3ce699068aaebfed9eb9c4f2fe16774 675 Gene3D G3DSA:2.40.50.180 566 629 1.3E-39 T 13-10-2018 COP00_01470 d3ce699068aaebfed9eb9c4f2fe16774 675 PRINTS PR00344 Bacterial sensor protein C-terminal signature 487 497 1.9E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 COP00_01470 d3ce699068aaebfed9eb9c4f2fe16774 675 PRINTS PR00344 Bacterial sensor protein C-terminal signature 527 540 1.9E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 COP00_01470 d3ce699068aaebfed9eb9c4f2fe16774 675 PRINTS PR00344 Bacterial sensor protein C-terminal signature 445 459 1.9E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 COP00_01470 d3ce699068aaebfed9eb9c4f2fe16774 675 PRINTS PR00344 Bacterial sensor protein C-terminal signature 503 521 1.9E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 COP00_01470 d3ce699068aaebfed9eb9c4f2fe16774 675 Pfam PF07194 P2 response regulator binding domain 165 245 6.7E-26 T 13-10-2018 IPR010808 Chemotaxis protein CheA, P2 response regulator-binding GO:0000155|GO:0000160|GO:0004673|GO:0006928 COP00_01470 d3ce699068aaebfed9eb9c4f2fe16774 675 SUPERFAMILY SSF50341 542 674 1.44E-33 T 13-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 COP00_01470 d3ce699068aaebfed9eb9c4f2fe16774 675 SMART SM00260 535 674 3.2E-47 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 COP00_01470 d3ce699068aaebfed9eb9c4f2fe16774 675 SMART SM01231 295 355 4.7E-19 T 13-10-2018 IPR004105 Histidine kinase CheA-like, homodimeric domain GO:0000155|GO:0000160|GO:0004673|GO:0005737|GO:0006935 COP00_01470 d3ce699068aaebfed9eb9c4f2fe16774 675 Gene3D G3DSA:3.30.70.1110 162 246 2.5E-28 T 13-10-2018 IPR037052 Chemotaxis protein CheA, P2 response regulator-binding domain superfamily COP00_01470 d3ce699068aaebfed9eb9c4f2fe16774 675 Pfam PF01627 Hpt domain 5 98 8.7E-20 T 13-10-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160 COP00_01015 4670ab9ae000214321e547287c42f35d 256 PIRSF PIRSF006816 1 256 1.2E-71 T 13-10-2018 IPR012165 Cytochrome-c3 hydrogenase, gamma subunit GO:0006221|GO:0050660|GO:0051537 COP00_01015 4670ab9ae000214321e547287c42f35d 256 Pfam PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B 215 254 2.0E-16 T 13-10-2018 IPR019480 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain COP00_01015 4670ab9ae000214321e547287c42f35d 256 SUPERFAMILY SSF52343 94 255 6.29E-33 T 13-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain COP00_01015 4670ab9ae000214321e547287c42f35d 256 Pfam PF00175 Oxidoreductase NAD-binding domain 112 202 1.7E-5 T 13-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 COP00_01015 4670ab9ae000214321e547287c42f35d 256 Gene3D G3DSA:2.40.30.10 2 97 1.9E-27 T 13-10-2018 COP00_01015 4670ab9ae000214321e547287c42f35d 256 SUPERFAMILY SSF63380 5 99 3.05E-20 T 13-10-2018 IPR017938 Riboflavin synthase-like beta-barrel COP00_01015 4670ab9ae000214321e547287c42f35d 256 Hamap MF_01211 Dihydroorotate dehydrogenase B (NAD(+)), electron transfer subunit [pyrK]. 3 256 38.328 T 13-10-2018 IPR023455 Dihydroorotate dehydrogenase electron transfer subunit COP00_01015 4670ab9ae000214321e547287c42f35d 256 Gene3D G3DSA:3.40.50.80 105 214 2.0E-26 T 13-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain COP00_01015 4670ab9ae000214321e547287c42f35d 256 Gene3D G3DSA:2.10.240.10 215 256 1.4E-19 T 13-10-2018 IPR037117 Dihydroorotate dehydrogenase, electron transfer subunit, Fe-S binding domain superfamily COP00_01505 50189b71989a324252893d3d395d0de6 293 Hamap MF_00050 Elongation factor Ts [tsf]. 1 291 83.969 T 13-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 COP00_01505 50189b71989a324252893d3d395d0de6 293 Gene3D G3DSA:1.10.8.10 1 55 7.7E-28 T 13-10-2018 COP00_01505 50189b71989a324252893d3d395d0de6 293 Pfam PF00889 Elongation factor TS 70 274 2.1E-77 T 13-10-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0006414 Reactome: R-HSA-5389840 COP00_01505 50189b71989a324252893d3d395d0de6 293 SUPERFAMILY SSF54713 152 292 5.1E-53 T 13-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 COP00_01505 50189b71989a324252893d3d395d0de6 293 Gene3D G3DSA:1.10.286.20 193 239 4.8E-45 T 13-10-2018 COP00_01505 50189b71989a324252893d3d395d0de6 293 ProSitePatterns PS01127 Elongation factor Ts signature 2. 74 84 - T 13-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 COP00_01505 50189b71989a324252893d3d395d0de6 293 ProSitePatterns PS01126 Elongation factor Ts signature 1. 11 26 - T 13-10-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 COP00_01505 50189b71989a324252893d3d395d0de6 293 Gene3D G3DSA:3.30.479.20 155 273 4.8E-45 T 13-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 COP00_01505 50189b71989a324252893d3d395d0de6 293 SUPERFAMILY SSF54713 55 144 7.46E-24 T 13-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 COP00_01505 50189b71989a324252893d3d395d0de6 293 Gene3D G3DSA:3.30.479.20 56 147 5.0E-26 T 13-10-2018 IPR036402 Elongation factor Ts, dimerisation domain superfamily Reactome: R-HSA-5389840 COP00_01505 50189b71989a324252893d3d395d0de6 293 SUPERFAMILY SSF46934 3 54 4.42E-21 T 13-10-2018 IPR009060 UBA-like superfamily GO:0005515 COP00_01505 50189b71989a324252893d3d395d0de6 293 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 293 1.6E-125 T 13-10-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 COP00_08690 7097d80a4655fd2512aa668bc70d39e8 247 Pfam PF01138 3' exoribonuclease family, domain 1 10 140 8.2E-24 T 13-10-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 COP00_08690 7097d80a4655fd2512aa668bc70d39e8 247 SUPERFAMILY SSF54211 1 182 2.89E-44 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold COP00_08690 7097d80a4655fd2512aa668bc70d39e8 247 Pfam PF03725 3' exoribonuclease family, domain 2 160 225 6.1E-9 T 13-10-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 COP00_08690 7097d80a4655fd2512aa668bc70d39e8 247 Hamap MF_00564 Ribonuclease PH [rph]. 11 238 44.715 T 13-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 COP00_08690 7097d80a4655fd2512aa668bc70d39e8 247 ProSitePatterns PS01277 Ribonuclease PH signature. 116 128 - T 13-10-2018 IPR018336 Ribonuclease PH, conserved site COP00_08690 7097d80a4655fd2512aa668bc70d39e8 247 Gene3D G3DSA:3.30.230.70 13 242 3.9E-62 T 13-10-2018 IPR027408 PNPase/RNase PH domain superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 COP00_08690 7097d80a4655fd2512aa668bc70d39e8 247 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 2 237 1.5E-117 T 13-10-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 COP00_08690 7097d80a4655fd2512aa668bc70d39e8 247 SUPERFAMILY SSF55666 153 237 6.02E-23 T 13-10-2018 IPR036345 Exoribonuclease, PH domain 2 superfamily Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 COP00_15055 62858e4f6d584a5862cce1824c029b99 692 Gene3D G3DSA:1.20.1370.20 442 533 3.3E-34 T 13-10-2018 COP00_15055 62858e4f6d584a5862cce1824c029b99 692 Gene3D G3DSA:2.40.180.10 1 441 4.6E-213 T 13-10-2018 IPR037060 Catalase core domain superfamily GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 COP00_15055 62858e4f6d584a5862cce1824c029b99 692 ProSitePatterns PS00438 Catalase proximal active site signature. 67 83 - T 13-10-2018 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 COP00_15055 62858e4f6d584a5862cce1824c029b99 692 PRINTS PR00067 Catalase signature 107 125 3.7E-71 T 13-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 COP00_15055 62858e4f6d584a5862cce1824c029b99 692 PRINTS PR00067 Catalase signature 348 374 3.7E-71 T 13-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 COP00_15055 62858e4f6d584a5862cce1824c029b99 692 PRINTS PR00067 Catalase signature 44 67 3.7E-71 T 13-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 COP00_15055 62858e4f6d584a5862cce1824c029b99 692 PRINTS PR00067 Catalase signature 128 145 3.7E-71 T 13-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 COP00_15055 62858e4f6d584a5862cce1824c029b99 692 PRINTS PR00067 Catalase signature 147 165 3.7E-71 T 13-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 COP00_15055 62858e4f6d584a5862cce1824c029b99 692 PRINTS PR00067 Catalase signature 316 343 3.7E-71 T 13-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 COP00_15055 62858e4f6d584a5862cce1824c029b99 692 Pfam PF06628 Catalase-related immune-responsive 446 510 3.1E-22 T 13-10-2018 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 COP00_15055 62858e4f6d584a5862cce1824c029b99 692 Pfam PF01965 DJ-1/PfpI family 543 653 1.6E-12 T 13-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 COP00_15055 62858e4f6d584a5862cce1824c029b99 692 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 361 369 - T 13-10-2018 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 COP00_15055 62858e4f6d584a5862cce1824c029b99 692 SMART SM01060 31 419 1.6E-276 T 13-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 COP00_15055 62858e4f6d584a5862cce1824c029b99 692 PIRSF PIRSF038927 1 692 0.0 T 13-10-2018 IPR024712 Catalase, mono-functional, haem-containing, clade 2 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 COP00_15055 62858e4f6d584a5862cce1824c029b99 692 Pfam PF00199 Catalase 31 416 5.4E-181 T 13-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 COP00_15055 62858e4f6d584a5862cce1824c029b99 692 SUPERFAMILY SSF56634 12 534 1.31E-225 T 13-10-2018 IPR020835 Catalase superfamily GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 COP00_15055 62858e4f6d584a5862cce1824c029b99 692 SUPERFAMILY SSF52317 541 680 1.23E-20 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like COP00_15055 62858e4f6d584a5862cce1824c029b99 692 Gene3D G3DSA:3.40.50.880 534 692 7.2E-44 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like COP00_08615 998b58505fe47b786898edfc65c36962 342 SUPERFAMILY SSF48179 183 331 2.55E-70 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 COP00_08615 998b58505fe47b786898edfc65c36962 342 Gene3D G3DSA:1.10.3730.40 182 337 2.1E-69 T 13-10-2018 COP00_08615 998b58505fe47b786898edfc65c36962 342 SUPERFAMILY SSF51735 3 182 1.15E-72 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily COP00_08615 998b58505fe47b786898edfc65c36962 342 Hamap MF_00435 Ketol-acid reductoisomerase (NADP(+)) [ilvC]. 2 328 44.786 T 13-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 COP00_08615 998b58505fe47b786898edfc65c36962 342 PIRSF PIRSF000116 1 208 9.1E-42 T 13-10-2018 IPR014359 Ketol-acid reductoisomerase, prokaryotic GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 COP00_08615 998b58505fe47b786898edfc65c36962 342 PIRSF PIRSF000116 202 332 2.1E-16 T 13-10-2018 IPR014359 Ketol-acid reductoisomerase, prokaryotic GO:0004455|GO:0009082|GO:0050661|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 COP00_08615 998b58505fe47b786898edfc65c36962 342 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 183 325 1.4E-65 T 13-10-2018 IPR000506 Ketol-acid reductoisomerase, C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 COP00_08615 998b58505fe47b786898edfc65c36962 342 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 15 327 1.0E-150 T 13-10-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 COP00_08615 998b58505fe47b786898edfc65c36962 342 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 15 177 2.3E-76 T 13-10-2018 IPR013116 Ketol-acid reductoisomerase, N-terminal KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 COP00_08615 998b58505fe47b786898edfc65c36962 342 Gene3D G3DSA:3.40.50.720 1 181 6.2E-79 T 13-10-2018 COP00_00175 4f70f21ca9965ee9c5343e8d0bf68d1a 364 Pfam PF00557 Metallopeptidase family M24 146 346 6.4E-62 T 13-10-2018 IPR000994 Peptidase M24 COP00_00175 4f70f21ca9965ee9c5343e8d0bf68d1a 364 Pfam PF01321 Creatinase/Prolidase N-terminal domain 3 137 1.7E-25 T 13-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 COP00_00175 4f70f21ca9965ee9c5343e8d0bf68d1a 364 SUPERFAMILY SSF55920 139 363 3.79E-77 T 13-10-2018 IPR036005 Creatinase/aminopeptidase-like COP00_00175 4f70f21ca9965ee9c5343e8d0bf68d1a 364 PRINTS PR00599 Methionine aminopeptidase-1 signature 315 327 1.7E-6 T 13-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 COP00_00175 4f70f21ca9965ee9c5343e8d0bf68d1a 364 PRINTS PR00599 Methionine aminopeptidase-1 signature 217 233 1.7E-6 T 13-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 COP00_00175 4f70f21ca9965ee9c5343e8d0bf68d1a 364 Gene3D G3DSA:3.90.230.10 137 361 9.2E-80 T 13-10-2018 COP00_00175 4f70f21ca9965ee9c5343e8d0bf68d1a 364 Gene3D G3DSA:3.40.350.10 1 136 6.2E-39 T 13-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal COP00_00175 4f70f21ca9965ee9c5343e8d0bf68d1a 364 SUPERFAMILY SSF53092 2 135 6.28E-32 T 13-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal COP00_21890 fb1dd051f8b50b39ce2e4b63a9cf9e67 129 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 4 118 16.945 T 13-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 COP00_21890 fb1dd051f8b50b39ce2e4b63a9cf9e67 129 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 6 113 9.0E-21 T 13-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 COP00_11240 31527974bb4c913b7cc270cf09da23f0 227 SUPERFAMILY SSF50800 6 214 4.97E-72 T 13-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily COP00_11240 31527974bb4c913b7cc270cf09da23f0 227 Pfam PF03473 MOSC domain 52 157 1.1E-20 T 13-10-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 COP00_11240 31527974bb4c913b7cc270cf09da23f0 227 Pfam PF03475 3-alpha domain 172 213 3.2E-14 T 13-10-2018 IPR005163 3-alpha domain COP00_11240 31527974bb4c913b7cc270cf09da23f0 227 Gene3D G3DSA:2.40.33.20 2 227 7.1E-77 T 13-10-2018 COP00_20990 e8f958adfbce8dbd9cc1d061a7ca4442 616 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 395 410 - T 13-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 COP00_20990 e8f958adfbce8dbd9cc1d061a7ca4442 616 Gene3D G3DSA:3.30.450.40 19 204 8.6E-57 T 13-10-2018 IPR029016 GAF-like domain superfamily COP00_20990 e8f958adfbce8dbd9cc1d061a7ca4442 616 SMART SM00382 328 472 6.0E-8 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_20990 e8f958adfbce8dbd9cc1d061a7ca4442 616 SUPERFAMILY SSF55781 64 204 3.3E-7 T 13-10-2018 COP00_20990 e8f958adfbce8dbd9cc1d061a7ca4442 616 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 517 526 - T 13-10-2018 IPR025944 Sigma-54 interaction domain, conserved site COP00_20990 e8f958adfbce8dbd9cc1d061a7ca4442 616 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 597 616 6.3E-10 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 COP00_20990 e8f958adfbce8dbd9cc1d061a7ca4442 616 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 580 597 6.3E-10 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 COP00_20990 e8f958adfbce8dbd9cc1d061a7ca4442 616 Pfam PF02954 Bacterial regulatory protein, Fis family 574 614 1.5E-11 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 COP00_20990 e8f958adfbce8dbd9cc1d061a7ca4442 616 Gene3D G3DSA:3.40.50.300 302 479 8.2E-60 T 13-10-2018 COP00_20990 e8f958adfbce8dbd9cc1d061a7ca4442 616 Gene3D G3DSA:1.10.10.60 575 616 8.5E-12 T 13-10-2018 COP00_20990 e8f958adfbce8dbd9cc1d061a7ca4442 616 Pfam PF00158 Sigma-54 interaction domain 310 475 2.1E-64 T 13-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 COP00_20990 e8f958adfbce8dbd9cc1d061a7ca4442 616 Gene3D G3DSA:1.10.8.60 480 541 1.2E-13 T 13-10-2018 COP00_20990 e8f958adfbce8dbd9cc1d061a7ca4442 616 SUPERFAMILY SSF52540 310 545 8.91E-63 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_20990 e8f958adfbce8dbd9cc1d061a7ca4442 616 SUPERFAMILY SSF46689 572 616 2.99E-9 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 COP00_20990 e8f958adfbce8dbd9cc1d061a7ca4442 616 Pfam PF01590 GAF domain 115 187 5.1E-5 T 13-10-2018 IPR003018 GAF domain GO:0005515 COP00_13260 b1dcfad55b2723130bf4e10995b29810 666 SUPERFAMILY SSF53756 422 588 2.72E-14 T 13-10-2018 COP00_13260 b1dcfad55b2723130bf4e10995b29810 666 Gene3D G3DSA:3.40.50.11820 300 656 2.5E-132 T 13-10-2018 COP00_13260 b1dcfad55b2723130bf4e10995b29810 666 Gene3D G3DSA:3.40.50.12580 466 649 2.5E-132 T 13-10-2018 COP00_13260 b1dcfad55b2723130bf4e10995b29810 666 Pfam PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase 299 663 2.8E-111 T 13-10-2018 IPR007554 CDP-glycerol glycerophosphotransferase GO:0016020|GO:0047355 COP00_12915 d83817526d69589cae2bf6291ea8405e 270 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 136 148 - T 13-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 COP00_12915 d83817526d69589cae2bf6291ea8405e 270 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 7 261 17.737 T 13-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 COP00_12915 d83817526d69589cae2bf6291ea8405e 270 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 1 265 1.6E-91 T 13-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 COP00_12915 d83817526d69589cae2bf6291ea8405e 270 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 10 256 5.2E-79 T 13-10-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0016020|GO:0016757|GO:0042158 COP00_14075 b4161903ed679e4905fa7dc8b371c54e 61 Gene3D G3DSA:3.30.429.10 1 60 4.0E-28 T 13-10-2018 IPR014347 Tautomerase/MIF superfamily COP00_14075 b4161903ed679e4905fa7dc8b371c54e 61 TIGRFAM TIGR00013 taut: 4-oxalocrotonate tautomerase family enzyme 1 60 1.1E-28 T 13-10-2018 IPR018191 4-oxalocrotonate tautomerase, Pseudomonas-type GO:0006725|GO:0016853 COP00_14075 b4161903ed679e4905fa7dc8b371c54e 61 Pfam PF01361 Tautomerase enzyme 2 60 7.5E-24 T 13-10-2018 IPR004370 4-oxalocrotonate tautomerase GO:0006725|GO:0016853 COP00_14075 b4161903ed679e4905fa7dc8b371c54e 61 SUPERFAMILY SSF55331 2 60 2.75E-20 T 13-10-2018 IPR014347 Tautomerase/MIF superfamily COP00_05480 e2b5d54725b1a8af491365158a4ebf30 220 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 189 205 3.1E-5 T 13-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 COP00_05480 e2b5d54725b1a8af491365158a4ebf30 220 SMART SM00525 188 208 0.0024 T 13-10-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 COP00_05480 e2b5d54725b1a8af491365158a4ebf30 220 SUPERFAMILY SSF48150 1 211 1.88E-74 T 13-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 COP00_05480 e2b5d54725b1a8af491365158a4ebf30 220 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 36 170 7.1E-25 T 13-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 COP00_05480 e2b5d54725b1a8af491365158a4ebf30 220 SMART SM00478 39 187 1.4E-71 T 13-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 COP00_05480 e2b5d54725b1a8af491365158a4ebf30 220 Hamap MF_00942 Endonuclease III [nth]. 1 211 39.289 T 13-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 COP00_05480 e2b5d54725b1a8af491365158a4ebf30 220 Gene3D G3DSA:1.10.340.30 22 133 1.9E-82 T 13-10-2018 COP00_05480 e2b5d54725b1a8af491365158a4ebf30 220 PIRSF PIRSF001435 1 214 1.1E-58 T 13-10-2018 COP00_05480 e2b5d54725b1a8af491365158a4ebf30 220 Pfam PF00633 Helix-hairpin-helix motif 100 128 9.8E-10 T 13-10-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 COP00_05480 e2b5d54725b1a8af491365158a4ebf30 220 TIGRFAM TIGR01083 nth: endonuclease III 5 196 7.0E-89 T 13-10-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 COP00_05480 e2b5d54725b1a8af491365158a4ebf30 220 Gene3D G3DSA:1.10.1670.10 16 205 1.9E-82 T 13-10-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 COP00_05480 e2b5d54725b1a8af491365158a4ebf30 220 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 189 205 - T 13-10-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 COP00_05480 e2b5d54725b1a8af491365158a4ebf30 220 ProSitePatterns PS01155 Endonuclease III family signature. 103 132 - T 13-10-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 COP00_01400 34dcce1fc088fac2a9ba0e0e789ee1e2 71 Pfam PF06289 Flagellar protein (FlbD) 1 58 1.0E-27 T 13-10-2018 IPR009384 Swarming motility protein SwrD-like COP00_21215 6eaf6f30930555e1256dffc219791b87 333 SUPERFAMILY SSF161098 92 317 2.18E-19 T 13-10-2018 IPR035906 MetI-like superfamily COP00_21215 6eaf6f30930555e1256dffc219791b87 333 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 332 2.4E-40 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 COP00_15220 cd040a4d7a72cf8cd711f971b2deb66b 420 Gene3D G3DSA:3.90.550.10 31 268 2.2E-48 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases COP00_15220 cd040a4d7a72cf8cd711f971b2deb66b 420 Pfam PF13641 Glycosyltransferase like family 2 49 279 3.4E-31 T 13-10-2018 COP00_15220 cd040a4d7a72cf8cd711f971b2deb66b 420 SUPERFAMILY SSF53448 38 318 2.01E-60 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases COP00_20005 c7dc66be04a8c53d5966a33fab7155e3 321 Gene3D G3DSA:1.10.10.10 1 63 3.7E-11 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_20005 c7dc66be04a8c53d5966a33fab7155e3 321 Pfam PF13280 WYL domain 140 311 9.3E-25 T 13-10-2018 IPR026881 WYL domain COP00_20005 c7dc66be04a8c53d5966a33fab7155e3 321 SMART SM00420 6 62 1.5E-5 T 13-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 COP00_20005 c7dc66be04a8c53d5966a33fab7155e3 321 PIRSF PIRSF016838 1 319 6.6E-17 T 13-10-2018 IPR028349 Protein PafC COP00_20005 c7dc66be04a8c53d5966a33fab7155e3 321 Pfam PF08279 HTH domain 6 61 3.1E-14 T 13-10-2018 IPR013196 Helix-turn-helix, type 11 COP00_20005 c7dc66be04a8c53d5966a33fab7155e3 321 SUPERFAMILY SSF46785 1 63 7.37E-11 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_01050 369e3afc8802b090d1e66ef9d25b8c06 378 Gene3D G3DSA:3.10.400.10 3 153 3.0E-45 T 13-10-2018 COP00_01050 369e3afc8802b090d1e66ef9d25b8c06 378 Pfam PF14306 PUA-like domain 4 153 3.4E-48 T 13-10-2018 IPR025980 ATP-sulfurylase PUA-like domain KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 COP00_01050 369e3afc8802b090d1e66ef9d25b8c06 378 Hamap MF_00066 Sulfate adenylyltransferase [sat]. 20 375 51.934 T 13-10-2018 IPR020792 Sulphate adenylyltransferase, prokaryotic-type GO:0000103|GO:0004781 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 COP00_01050 369e3afc8802b090d1e66ef9d25b8c06 378 SUPERFAMILY SSF88697 4 158 6.46E-48 T 13-10-2018 IPR015947 PUA-like superfamily COP00_01050 369e3afc8802b090d1e66ef9d25b8c06 378 Pfam PF01747 ATP-sulfurylase 164 371 1.6E-92 T 13-10-2018 IPR024951 Sulphate adenylyltransferase catalytic domain GO:0004781 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 COP00_01050 369e3afc8802b090d1e66ef9d25b8c06 378 Gene3D G3DSA:3.40.50.620 163 373 5.0E-96 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold COP00_01050 369e3afc8802b090d1e66ef9d25b8c06 378 SUPERFAMILY SSF52374 163 371 1.5E-85 T 13-10-2018 COP00_01050 369e3afc8802b090d1e66ef9d25b8c06 378 TIGRFAM TIGR00339 sopT: sulfate adenylyltransferase 5 371 3.1E-142 T 13-10-2018 IPR002650 Sulphate adenylyltransferase GO:0000103|GO:0004781 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 COP00_11675 4696aaf16c4a0534c5f338ec30cb72b3 100 TIGRFAM TIGR01560 put_DNA_pack: uncharacterized phage protein (possible DNA packaging) 9 89 5.0E-13 T 13-10-2018 IPR006450 Phage protein of unkonwn function COP00_11675 4696aaf16c4a0534c5f338ec30cb72b3 100 Pfam PF05135 Phage gp6-like head-tail connector protein 8 83 4.5E-14 T 13-10-2018 IPR021146 Phage gp6-like head-tail connector protein COP00_19715 4696aaf16c4a0534c5f338ec30cb72b3 100 TIGRFAM TIGR01560 put_DNA_pack: uncharacterized phage protein (possible DNA packaging) 9 89 5.0E-13 T 13-10-2018 IPR006450 Phage protein of unkonwn function COP00_19715 4696aaf16c4a0534c5f338ec30cb72b3 100 Pfam PF05135 Phage gp6-like head-tail connector protein 8 83 4.5E-14 T 13-10-2018 IPR021146 Phage gp6-like head-tail connector protein COP00_15935 311042c1f6bb0c9f8527daf026991e94 447 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 8 446 9.7E-190 T 13-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 COP00_15935 311042c1f6bb0c9f8527daf026991e94 447 Gene3D G3DSA:3.40.50.300 95 276 9.9E-55 T 13-10-2018 COP00_15935 311042c1f6bb0c9f8527daf026991e94 447 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 5 447 35.322 T 13-10-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 COP00_15935 311042c1f6bb0c9f8527daf026991e94 447 ProSitePatterns PS01008 DnaA protein signature. 406 425 - T 13-10-2018 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 COP00_15935 311042c1f6bb0c9f8527daf026991e94 447 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 357 425 5.2E-31 T 13-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 COP00_15935 311042c1f6bb0c9f8527daf026991e94 447 Gene3D G3DSA:1.10.8.60 278 346 3.3E-30 T 13-10-2018 COP00_15935 311042c1f6bb0c9f8527daf026991e94 447 SUPERFAMILY SSF52540 112 324 1.14E-47 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_15935 311042c1f6bb0c9f8527daf026991e94 447 SUPERFAMILY SSF48295 343 446 5.23E-37 T 13-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 COP00_15935 311042c1f6bb0c9f8527daf026991e94 447 Gene3D G3DSA:1.10.1750.10 347 447 1.2E-36 T 13-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 COP00_15935 311042c1f6bb0c9f8527daf026991e94 447 Gene3D G3DSA:3.30.300.180 1 82 4.4E-33 T 13-10-2018 IPR038454 DnaA, N-terminal domain superfamily COP00_15935 311042c1f6bb0c9f8527daf026991e94 447 Pfam PF11638 DnaA N-terminal domain 6 65 3.6E-18 T 13-10-2018 IPR024633 DnaA N-terminal domain COP00_15935 311042c1f6bb0c9f8527daf026991e94 447 SMART SM00760 356 425 4.7E-42 T 13-10-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 COP00_15935 311042c1f6bb0c9f8527daf026991e94 447 Pfam PF00308 Bacterial dnaA protein 112 328 1.1E-106 T 13-10-2018 IPR013317 Chromosomal replication initiator protein DnaA COP00_15935 311042c1f6bb0c9f8527daf026991e94 447 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 209 223 3.2E-53 T 13-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like COP00_15935 311042c1f6bb0c9f8527daf026991e94 447 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 243 270 3.2E-53 T 13-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like COP00_15935 311042c1f6bb0c9f8527daf026991e94 447 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 406 425 3.2E-53 T 13-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like COP00_15935 311042c1f6bb0c9f8527daf026991e94 447 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 177 191 3.2E-53 T 13-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like COP00_15935 311042c1f6bb0c9f8527daf026991e94 447 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 145 165 3.2E-53 T 13-10-2018 IPR020591 Chromosomal replication control, initiator DnaA-like COP00_15935 311042c1f6bb0c9f8527daf026991e94 447 SMART SM00382 144 272 2.9E-9 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_08750 ea11942028e6ee925540427b8e9de413 410 Pfam PF00696 Amino acid kinase family 3 229 9.1E-53 T 13-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 COP00_08750 ea11942028e6ee925540427b8e9de413 410 ProSitePatterns PS00324 Aspartokinase signature. 5 13 - T 13-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 COP00_08750 ea11942028e6ee925540427b8e9de413 410 SUPERFAMILY SSF55021 328 406 1.05E-22 T 13-10-2018 COP00_08750 ea11942028e6ee925540427b8e9de413 410 Pfam PF13840 ACT domain 335 398 7.3E-15 T 13-10-2018 IPR027795 CASTOR, ACT domain COP00_08750 ea11942028e6ee925540427b8e9de413 410 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 1 401 1.4E-145 T 13-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 COP00_08750 ea11942028e6ee925540427b8e9de413 410 Gene3D G3DSA:3.30.70.260 254 402 1.5E-48 T 13-10-2018 COP00_08750 ea11942028e6ee925540427b8e9de413 410 Pfam PF01842 ACT domain 275 326 5.1E-7 T 13-10-2018 IPR002912 ACT domain COP00_08750 ea11942028e6ee925540427b8e9de413 410 SUPERFAMILY SSF55021 248 325 7.64E-16 T 13-10-2018 COP00_08750 ea11942028e6ee925540427b8e9de413 410 SUPERFAMILY SSF53633 3 242 2.23E-75 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily COP00_08750 ea11942028e6ee925540427b8e9de413 410 Gene3D G3DSA:3.40.1160.10 1 253 1.3E-93 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily COP00_08750 ea11942028e6ee925540427b8e9de413 410 Gene3D G3DSA:3.30.70.260 260 337 1.5E-48 T 13-10-2018 COP00_08750 ea11942028e6ee925540427b8e9de413 410 PIRSF PIRSF000726 57 407 1.6E-140 T 13-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 COP00_08750 ea11942028e6ee925540427b8e9de413 410 PIRSF PIRSF000726 1 62 4.1E-21 T 13-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 COP00_08750 ea11942028e6ee925540427b8e9de413 410 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 1 402 4.6E-158 T 13-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 COP00_08175 0539d3488e118db7c69b29f297fe517c 790 Gene3D G3DSA:1.10.10.2220 192 291 5.5E-15 T 13-10-2018 COP00_08175 0539d3488e118db7c69b29f297fe517c 790 Pfam PF13604 AAA domain 338 546 7.5E-51 T 13-10-2018 COP00_08175 0539d3488e118db7c69b29f297fe517c 790 Gene3D G3DSA:3.40.50.300 330 743 2.0E-143 T 13-10-2018 COP00_08175 0539d3488e118db7c69b29f297fe517c 790 Pfam PF14490 Helix-hairpin-helix containing domain 151 241 1.5E-29 T 13-10-2018 IPR029493 RecD helicase-like helix-hairpin-helix domain COP00_08175 0539d3488e118db7c69b29f297fe517c 790 SUPERFAMILY SSF52540 334 729 1.14E-57 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_08175 0539d3488e118db7c69b29f297fe517c 790 Hamap MF_01488 ATP-dependent RecD-like DNA helicase [recD2]. 6 750 29.755 T 13-10-2018 IPR006345 DNA helicase, RecD-like GO:0003677|GO:0032508|GO:0043141 COP00_08175 0539d3488e118db7c69b29f297fe517c 790 Gene3D G3DSA:2.30.30.940 595 674 2.0E-143 T 13-10-2018 COP00_08175 0539d3488e118db7c69b29f297fe517c 790 Gene3D G3DSA:3.40.50.300 509 737 2.0E-143 T 13-10-2018 COP00_08175 0539d3488e118db7c69b29f297fe517c 790 TIGRFAM TIGR01448 recD_rel: helicase, RecD/TraA family 9 746 9.9E-259 T 13-10-2018 IPR006345 DNA helicase, RecD-like GO:0003677|GO:0032508|GO:0043141 COP00_08175 0539d3488e118db7c69b29f297fe517c 790 Pfam PF13538 UvrD-like helicase C-terminal domain 673 721 8.4E-18 T 13-10-2018 IPR027785 UvrD-like helicase C-terminal domain COP00_16210 859a217282b898eceb00c972580fdefb 662 PRINTS PR01041 Methionyl-tRNA synthetase signature 270 285 3.9E-33 T 13-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 COP00_16210 859a217282b898eceb00c972580fdefb 662 PRINTS PR01041 Methionyl-tRNA synthetase signature 10 23 3.9E-33 T 13-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 COP00_16210 859a217282b898eceb00c972580fdefb 662 PRINTS PR01041 Methionyl-tRNA synthetase signature 362 373 3.9E-33 T 13-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 COP00_16210 859a217282b898eceb00c972580fdefb 662 PRINTS PR01041 Methionyl-tRNA synthetase signature 42 56 3.9E-33 T 13-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 COP00_16210 859a217282b898eceb00c972580fdefb 662 PRINTS PR01041 Methionyl-tRNA synthetase signature 237 248 3.9E-33 T 13-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 COP00_16210 859a217282b898eceb00c972580fdefb 662 PRINTS PR01041 Methionyl-tRNA synthetase signature 90 101 3.9E-33 T 13-10-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 COP00_16210 859a217282b898eceb00c972580fdefb 662 Gene3D G3DSA:1.10.730.10 352 521 1.3E-50 T 13-10-2018 COP00_16210 859a217282b898eceb00c972580fdefb 662 Pfam PF08264 Anticodon-binding domain of tRNA 400 534 9.6E-10 T 13-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 COP00_16210 859a217282b898eceb00c972580fdefb 662 Hamap MF_01228 Methionine--tRNA ligase [metG]. 3 522 52.005 T 13-10-2018 IPR023457 Methionine-tRNA synthetase, type 2 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 COP00_16210 859a217282b898eceb00c972580fdefb 662 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 8 524 7.1E-187 T 13-10-2018 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 COP00_16210 859a217282b898eceb00c972580fdefb 662 Pfam PF01588 Putative tRNA binding domain 568 659 5.4E-27 T 13-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 COP00_16210 859a217282b898eceb00c972580fdefb 662 SUPERFAMILY SSF47323 364 575 4.86E-47 T 13-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 COP00_16210 859a217282b898eceb00c972580fdefb 662 SUPERFAMILY SSF52374 5 365 3.66E-117 T 13-10-2018 COP00_16210 859a217282b898eceb00c972580fdefb 662 Gene3D G3DSA:2.170.220.10 119 239 3.2E-154 T 13-10-2018 COP00_16210 859a217282b898eceb00c972580fdefb 662 Gene3D G3DSA:3.40.50.620 8 345 3.2E-154 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold COP00_16210 859a217282b898eceb00c972580fdefb 662 SUPERFAMILY SSF50249 557 661 9.79E-32 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold COP00_16210 859a217282b898eceb00c972580fdefb 662 Gene3D G3DSA:2.40.50.140 553 662 6.3E-35 T 13-10-2018 COP00_16210 859a217282b898eceb00c972580fdefb 662 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 17 26 - T 13-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 COP00_16210 859a217282b898eceb00c972580fdefb 662 Pfam PF09334 tRNA synthetases class I (M) 8 374 1.9E-121 T 13-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 COP00_16210 859a217282b898eceb00c972580fdefb 662 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 527 662 7.8E-48 T 13-10-2018 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 COP00_13625 64d40a9f86361bb8fff28bcec3c7ad37 116 Gene3D G3DSA:3.30.70.120 1 116 1.6E-43 T 13-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal COP00_13625 64d40a9f86361bb8fff28bcec3c7ad37 116 SMART SM00938 8 109 1.1E-36 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 COP00_13625 64d40a9f86361bb8fff28bcec3c7ad37 116 PRINTS PR00340 P-II protein signature 56 79 2.7E-21 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 COP00_13625 64d40a9f86361bb8fff28bcec3c7ad37 116 PRINTS PR00340 P-II protein signature 87 107 2.7E-21 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 COP00_13625 64d40a9f86361bb8fff28bcec3c7ad37 116 PRINTS PR00340 P-II protein signature 6 21 2.7E-21 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 COP00_13625 64d40a9f86361bb8fff28bcec3c7ad37 116 PRINTS PR00340 P-II protein signature 27 45 2.7E-21 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 COP00_13625 64d40a9f86361bb8fff28bcec3c7ad37 116 SUPERFAMILY SSF54913 5 116 9.53E-34 T 13-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta COP00_13625 64d40a9f86361bb8fff28bcec3c7ad37 116 Pfam PF00543 Nitrogen regulatory protein P-II 8 109 1.3E-31 T 13-10-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 COP00_13625 64d40a9f86361bb8fff28bcec3c7ad37 116 ProSitePatterns PS00638 P-II protein C-terminal region signature. 87 100 - T 13-10-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 COP00_04490 c8bc18134525070a19ac6f80d5e95fa9 190 Gene3D G3DSA:1.10.10.60 1 50 1.2E-21 T 13-10-2018 COP00_04490 c8bc18134525070a19ac6f80d5e95fa9 190 Gene3D G3DSA:1.10.357.10 53 185 9.0E-29 T 13-10-2018 COP00_04490 c8bc18134525070a19ac6f80d5e95fa9 190 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 47 1.1E-5 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 COP00_04490 c8bc18134525070a19ac6f80d5e95fa9 190 SUPERFAMILY SSF48498 81 184 2.15E-20 T 13-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily COP00_04490 c8bc18134525070a19ac6f80d5e95fa9 190 SUPERFAMILY SSF46689 8 73 1.8E-9 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 COP00_04490 c8bc18134525070a19ac6f80d5e95fa9 190 Pfam PF13305 WHG domain 86 158 2.0E-13 T 13-10-2018 IPR025996 WHG domain COP00_16230 99414a25624c0fc05adcc739c8aa4c1e 292 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 52 79 - T 13-10-2018 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 COP00_16230 99414a25624c0fc05adcc739c8aa4c1e 292 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 20 288 55.473 T 13-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 COP00_16230 99414a25624c0fc05adcc739c8aa4c1e 292 Pfam PF00398 Ribosomal RNA adenine dimethylase 20 280 3.3E-81 T 13-10-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm COP00_16230 99414a25624c0fc05adcc739c8aa4c1e 292 SUPERFAMILY SSF53335 17 289 2.22E-72 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase COP00_16230 99414a25624c0fc05adcc739c8aa4c1e 292 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 20 286 5.4E-87 T 13-10-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 COP00_16230 99414a25624c0fc05adcc739c8aa4c1e 292 Gene3D G3DSA:3.40.50.150 1 216 1.2E-74 T 13-10-2018 COP00_16230 99414a25624c0fc05adcc739c8aa4c1e 292 Gene3D G3DSA:1.10.8.100 220 291 3.0E-21 T 13-10-2018 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201|Reactome: R-HSA-6793080 COP00_16230 99414a25624c0fc05adcc739c8aa4c1e 292 SMART SM00650 36 212 6.9E-87 T 13-10-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 COP00_09665 2764650e6129223a6953f900213f2e26 232 SUPERFAMILY SSF52540 1 226 3.28E-72 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_09665 2764650e6129223a6953f900213f2e26 232 Pfam PF00005 ABC transporter 25 173 2.0E-36 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 COP00_09665 2764650e6129223a6953f900213f2e26 232 Gene3D G3DSA:3.40.50.300 1 231 4.4E-71 T 13-10-2018 COP00_09665 2764650e6129223a6953f900213f2e26 232 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 COP00_09665 2764650e6129223a6953f900213f2e26 232 SMART SM00382 34 222 1.7E-17 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_09365 7ce9ceaacc2e3d4cfbe006563d6c493d 358 TIGRFAM TIGR01361 DAHP_synth_Bsub: 3-deoxy-7-phosphoheptulonate synthase 95 351 6.3E-121 T 13-10-2018 IPR006268 Phospho-2-dehydro-3-deoxyheptonate aldolase, subtype 2 GO:0009073|GO:0016832 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 COP00_09365 7ce9ceaacc2e3d4cfbe006563d6c493d 358 SMART SM00830 10 89 6.5E-19 T 13-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 COP00_09365 7ce9ceaacc2e3d4cfbe006563d6c493d 358 Gene3D G3DSA:1.20.59.10 8 92 9.0E-27 T 13-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 COP00_09365 7ce9ceaacc2e3d4cfbe006563d6c493d 358 SUPERFAMILY SSF51569 31 353 5.4E-103 T 13-10-2018 COP00_09365 7ce9ceaacc2e3d4cfbe006563d6c493d 358 Gene3D G3DSA:3.20.20.70 93 356 1.7E-102 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 COP00_09365 7ce9ceaacc2e3d4cfbe006563d6c493d 358 Pfam PF01817 Chorismate mutase type II 10 87 6.8E-17 T 13-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 COP00_09365 7ce9ceaacc2e3d4cfbe006563d6c493d 358 Pfam PF00793 DAHP synthetase I family 110 354 2.4E-83 T 13-10-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 COP00_09365 7ce9ceaacc2e3d4cfbe006563d6c493d 358 TIGRFAM TIGR01801 CM_A: chorismate mutase 1 102 3.5E-49 T 13-10-2018 IPR010954 Chorismate mutase, Firmicutes/Deinococcus KEGG: 00400+2.5.1.54+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6164|MetaCyc: PWY-6627|MetaCyc: PWY-7626 COP00_24005 2dc00a9ac25891ba571a5e15c04564da 451 Gene3D G3DSA:1.10.357.20 272 448 1.6E-61 T 13-10-2018 IPR038048 Magnesium transporter MgtE, transmembrane domain COP00_24005 2dc00a9ac25891ba571a5e15c04564da 451 Pfam PF03448 MgtE intracellular N domain 33 134 1.1E-20 T 13-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain COP00_24005 2dc00a9ac25891ba571a5e15c04564da 451 Pfam PF01769 Divalent cation transporter 320 441 5.7E-32 T 13-10-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 COP00_24005 2dc00a9ac25891ba571a5e15c04564da 451 SMART SM00924 33 136 3.5E-25 T 13-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain COP00_24005 2dc00a9ac25891ba571a5e15c04564da 451 Gene3D G3DSA:1.25.60.10 2 131 6.9E-21 T 13-10-2018 IPR038076 MgtE, N-terminal domain superfamily COP00_24005 2dc00a9ac25891ba571a5e15c04564da 451 Pfam PF00571 CBS domain 136 194 3.2E-6 T 13-10-2018 IPR000644 CBS domain COP00_24005 2dc00a9ac25891ba571a5e15c04564da 451 Pfam PF00571 CBS domain 200 252 7.4E-8 T 13-10-2018 IPR000644 CBS domain COP00_24005 2dc00a9ac25891ba571a5e15c04564da 451 SUPERFAMILY SSF158791 8 133 5.1E-26 T 13-10-2018 COP00_24005 2dc00a9ac25891ba571a5e15c04564da 451 SUPERFAMILY SSF54631 135 266 1.64E-30 T 13-10-2018 COP00_24005 2dc00a9ac25891ba571a5e15c04564da 451 SUPERFAMILY SSF161093 281 448 1.96E-53 T 13-10-2018 IPR036739 SLC41 divalent cation transporters, integral membrane domain superfamily GO:0006812|GO:0008324 COP00_24005 2dc00a9ac25891ba571a5e15c04564da 451 Gene3D G3DSA:3.10.580.10 133 259 2.5E-43 T 13-10-2018 COP00_24005 2dc00a9ac25891ba571a5e15c04564da 451 SMART SM00116 207 255 4.7E-8 T 13-10-2018 IPR000644 CBS domain COP00_24005 2dc00a9ac25891ba571a5e15c04564da 451 SMART SM00116 143 196 0.26 T 13-10-2018 IPR000644 CBS domain COP00_24005 2dc00a9ac25891ba571a5e15c04564da 451 TIGRFAM TIGR00400 mgtE: magnesium transporter 4 450 1.9E-201 T 13-10-2018 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 COP00_12535 8d2695b8e53975e2f9dcc7552eb9429b 193 Pfam PF00692 dUTPase 134 175 8.6E-6 T 13-10-2018 IPR029054 dUTPase-like COP00_12535 8d2695b8e53975e2f9dcc7552eb9429b 193 Pfam PF00692 dUTPase 12 94 1.2E-15 T 13-10-2018 IPR029054 dUTPase-like COP00_12535 8d2695b8e53975e2f9dcc7552eb9429b 193 SUPERFAMILY SSF51283 4 176 6.07E-41 T 13-10-2018 IPR036157 dUTPase-like superfamily COP00_12535 8d2695b8e53975e2f9dcc7552eb9429b 193 Gene3D G3DSA:2.70.40.10 1 176 9.7E-57 T 13-10-2018 IPR036157 dUTPase-like superfamily COP00_14985 5593e25d370ac2a344a6c0e305b0485e 328 Gene3D G3DSA:3.40.1190.20 1 327 1.1E-100 T 13-10-2018 IPR029056 Ribokinase-like COP00_14985 5593e25d370ac2a344a6c0e305b0485e 328 SUPERFAMILY SSF53613 1 320 2.14E-83 T 13-10-2018 IPR029056 Ribokinase-like COP00_14985 5593e25d370ac2a344a6c0e305b0485e 328 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 253 266 - T 13-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 COP00_14985 5593e25d370ac2a344a6c0e305b0485e 328 PRINTS PR00990 Ribokinase signature 184 199 2.2E-5 T 13-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 COP00_14985 5593e25d370ac2a344a6c0e305b0485e 328 PRINTS PR00990 Ribokinase signature 29 48 2.2E-5 T 13-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 COP00_14985 5593e25d370ac2a344a6c0e305b0485e 328 PRINTS PR00990 Ribokinase signature 223 234 2.2E-5 T 13-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 COP00_14985 5593e25d370ac2a344a6c0e305b0485e 328 Pfam PF00294 pfkB family carbohydrate kinase 1 312 1.3E-72 T 13-10-2018 IPR011611 Carbohydrate kinase PfkB COP00_10930 47f894daaf6ab39b97eea188ff204d76 286 SUPERFAMILY SSF103481 192 284 3.4E-8 T 13-10-2018 COP00_10930 47f894daaf6ab39b97eea188ff204d76 286 SUPERFAMILY SSF103481 36 135 1.83E-11 T 13-10-2018 COP00_10930 47f894daaf6ab39b97eea188ff204d76 286 Pfam PF00892 EamA-like transporter family 149 283 4.7E-9 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 COP00_10930 47f894daaf6ab39b97eea188ff204d76 286 Pfam PF00892 EamA-like transporter family 5 135 5.8E-8 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 COP00_20290 437bb6e541a85b15396fc0c555b96c73 397 Pfam PF07537 CamS sex pheromone cAM373 precursor 61 388 5.0E-127 T 13-10-2018 IPR011426 CamS sex pheromone cAM373 COP00_20290 437bb6e541a85b15396fc0c555b96c73 397 Gene3D G3DSA:3.10.570.10 58 397 3.2E-134 T 13-10-2018 COP00_20290 437bb6e541a85b15396fc0c555b96c73 397 PIRSF PIRSF012509 2 396 1.3E-159 T 13-10-2018 IPR011426 CamS sex pheromone cAM373 COP00_17670 3fec547c6df615e47d52cd5b59f6b872 311 SMART SM00448 1 114 2.4E-22 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 COP00_17670 3fec547c6df615e47d52cd5b59f6b872 311 Pfam PF00072 Response regulator receiver domain 4 114 5.2E-23 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 COP00_17670 3fec547c6df615e47d52cd5b59f6b872 311 Pfam PF09338 Glycine/sarcosine/betaine reductase component B subunits 73 171 4.0E-5 T 13-10-2018 IPR015417 Glycine/sarcosine/betaine reductase complex, protein B, subunit alpha/ beta GO:0050485|GO:0055114 COP00_17670 3fec547c6df615e47d52cd5b59f6b872 311 Pfam PF08664 YcbB domain 157 296 3.2E-48 T 13-10-2018 IPR013972 YcbB domain COP00_17670 3fec547c6df615e47d52cd5b59f6b872 311 Gene3D G3DSA:3.40.50.2300 1 130 3.0E-23 T 13-10-2018 COP00_17670 3fec547c6df615e47d52cd5b59f6b872 311 SUPERFAMILY SSF52172 2 135 7.12E-25 T 13-10-2018 IPR011006 CheY-like superfamily COP00_10995 eff6906e2cd33e3a121b2051569fd07b 115 Pfam PF02036 SCP-2 sterol transfer family 25 101 5.6E-6 T 13-10-2018 IPR003033 SCP2 sterol-binding domain COP00_10995 eff6906e2cd33e3a121b2051569fd07b 115 SUPERFAMILY SSF55718 26 108 6.83E-9 T 13-10-2018 IPR036527 SCP2 sterol-binding domain superfamily COP00_10995 eff6906e2cd33e3a121b2051569fd07b 115 Gene3D G3DSA:3.30.1050.10 8 102 1.9E-9 T 13-10-2018 IPR036527 SCP2 sterol-binding domain superfamily COP00_16660 efb3bb181fc1e34da37150d5eaecfa0f 156 Gene3D G3DSA:1.10.455.10 2 156 4.6E-66 T 13-10-2018 IPR036823 Ribosomal protein S7 domain superfamily COP00_16660 efb3bb181fc1e34da37150d5eaecfa0f 156 PIRSF PIRSF002122 5 156 1.6E-60 T 13-10-2018 IPR000235 Ribosomal protein S5/S7 GO:0006412 COP00_16660 efb3bb181fc1e34da37150d5eaecfa0f 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 6.8E-68 T 13-10-2018 IPR023798 Ribosomal protein S7 domain COP00_16660 efb3bb181fc1e34da37150d5eaecfa0f 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 35.952 T 13-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 COP00_16660 efb3bb181fc1e34da37150d5eaecfa0f 156 SUPERFAMILY SSF47973 1 149 7.72E-63 T 13-10-2018 IPR036823 Ribosomal protein S7 domain superfamily COP00_16660 efb3bb181fc1e34da37150d5eaecfa0f 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 156 5.9E-72 T 13-10-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 COP00_16660 efb3bb181fc1e34da37150d5eaecfa0f 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 13-10-2018 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 COP00_09125 6da9bcb1a035b676f72c02f172b5271e 325 SUPERFAMILY SSF52096 6 313 4.98E-103 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily COP00_09125 6da9bcb1a035b676f72c02f172b5271e 325 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 4 315 49.656 T 13-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 COP00_09125 6da9bcb1a035b676f72c02f172b5271e 325 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 4 319 6.6E-165 T 13-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 COP00_09125 6da9bcb1a035b676f72c02f172b5271e 325 Gene3D G3DSA:3.90.226.10 2 316 4.0E-125 T 13-10-2018 COP00_09125 6da9bcb1a035b676f72c02f172b5271e 325 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 168 181 3.4E-47 T 13-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 COP00_09125 6da9bcb1a035b676f72c02f172b5271e 325 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 87 98 3.4E-47 T 13-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 COP00_09125 6da9bcb1a035b676f72c02f172b5271e 325 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 196 205 3.4E-47 T 13-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 COP00_09125 6da9bcb1a035b676f72c02f172b5271e 325 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 112 130 3.4E-47 T 13-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 COP00_09125 6da9bcb1a035b676f72c02f172b5271e 325 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 152 165 3.4E-47 T 13-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 COP00_09125 6da9bcb1a035b676f72c02f172b5271e 325 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 133 149 3.4E-47 T 13-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 COP00_09125 6da9bcb1a035b676f72c02f172b5271e 325 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 5 147 4.7E-67 T 13-10-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 COP00_24140 8c600dd714feab7c94e6e2988ead64ef 405 TIGRFAM TIGR03332 salvage_mtnW: 2,3-diketo-5-methylthiopentyl-1-phosphate enolase 2 399 5.4E-226 T 13-10-2018 IPR017717 2,3-diketo-5-methylthiopentyl-1-phosphate enolase GO:0000287|GO:0019509|GO:0043715 KEGG: 00270+5.3.2.5|MetaCyc: PWY-4361 COP00_24140 8c600dd714feab7c94e6e2988ead64ef 405 Gene3D G3DSA:3.20.20.110 114 404 1.9E-103 T 13-10-2018 IPR036376 Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamily GO:0000287 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 COP00_24140 8c600dd714feab7c94e6e2988ead64ef 405 SUPERFAMILY SSF54966 1 111 3.27E-30 T 13-10-2018 IPR036422 RuBisCO large subunit, N-terminal domain superfamily GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 COP00_24140 8c600dd714feab7c94e6e2988ead64ef 405 Hamap MF_01679 2,3-diketo-5-methylthiopentyl-1-phosphate enolase [mtnW]. 2 399 59.017 T 13-10-2018 IPR017717 2,3-diketo-5-methylthiopentyl-1-phosphate enolase GO:0000287|GO:0019509|GO:0043715 KEGG: 00270+5.3.2.5|MetaCyc: PWY-4361 COP00_24140 8c600dd714feab7c94e6e2988ead64ef 405 SUPERFAMILY SSF51649 114 401 6.41E-85 T 13-10-2018 IPR036376 Ribulose bisphosphate carboxylase, large subunit, C-terminal domain superfamily GO:0000287 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 COP00_24140 8c600dd714feab7c94e6e2988ead64ef 405 Pfam PF02788 Ribulose bisphosphate carboxylase large chain, N-terminal domain 2 93 6.8E-8 T 13-10-2018 IPR017443 Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 COP00_24140 8c600dd714feab7c94e6e2988ead64ef 405 Pfam PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain 320 398 4.0E-18 T 13-10-2018 IPR000685 Ribulose bisphosphate carboxylase, large subunit, C-terminal GO:0000287 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 COP00_24140 8c600dd714feab7c94e6e2988ead64ef 405 Pfam PF00016 Ribulose bisphosphate carboxylase large chain, catalytic domain 120 288 5.5E-22 T 13-10-2018 IPR000685 Ribulose bisphosphate carboxylase, large subunit, C-terminal GO:0000287 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 COP00_24140 8c600dd714feab7c94e6e2988ead64ef 405 Gene3D G3DSA:3.30.70.150 1 112 1.2E-31 T 13-10-2018 IPR036422 RuBisCO large subunit, N-terminal domain superfamily GO:0015977|GO:0016984 KEGG: 00630+4.1.1.39|KEGG: 00710+4.1.1.39|MetaCyc: PWY-5532|MetaCyc: PWY-5723 COP00_11755 9411da7a150430f8347ad7ad44544361 180 Pfam PF00589 Phage integrase family 10 164 2.5E-23 T 13-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 COP00_11755 9411da7a150430f8347ad7ad44544361 180 Gene3D G3DSA:1.10.443.10 9 179 1.2E-30 T 13-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 COP00_11755 9411da7a150430f8347ad7ad44544361 180 SUPERFAMILY SSF56349 7 178 5.3E-37 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 COP00_14980 af6a07b93f48455712f60a161e873743 411 Pfam PF01546 Peptidase family M20/M25/M40 142 404 9.4E-13 T 13-10-2018 IPR002933 Peptidase M20 GO:0016787 COP00_14980 af6a07b93f48455712f60a161e873743 411 Gene3D G3DSA:3.40.630.10 6 403 1.7E-187 T 13-10-2018 COP00_14980 af6a07b93f48455712f60a161e873743 411 Pfam PF07687 Peptidase dimerisation domain 210 307 1.9E-13 T 13-10-2018 IPR011650 Peptidase M20, dimerisation domain COP00_14980 af6a07b93f48455712f60a161e873743 411 TIGRFAM TIGR01882 peptidase-T: peptidase T 3 411 7.6E-216 T 13-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 COP00_14980 af6a07b93f48455712f60a161e873743 411 SUPERFAMILY SSF53187 4 407 1.36E-82 T 13-10-2018 COP00_14980 af6a07b93f48455712f60a161e873743 411 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 75 84 - T 13-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 COP00_14980 af6a07b93f48455712f60a161e873743 411 Hamap MF_00550 Peptidase T [pepT]. 3 407 60.177 T 13-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 COP00_14980 af6a07b93f48455712f60a161e873743 411 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 141 180 - T 13-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 COP00_14980 af6a07b93f48455712f60a161e873743 411 Gene3D G3DSA:3.30.70.360 212 322 1.7E-187 T 13-10-2018 COP00_14980 af6a07b93f48455712f60a161e873743 411 PIRSF PIRSF037215 1 411 3.6E-197 T 13-10-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 COP00_14980 af6a07b93f48455712f60a161e873743 411 SUPERFAMILY SSF55031 212 323 3.84E-40 T 13-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain COP00_13210 5d5cc4831edd4c716d13365f818a8508 705 Pfam PF04122 Putative cell wall binding repeat 2 163 242 1.0E-17 T 13-10-2018 IPR007253 Putative cell wall binding repeat 2 COP00_13210 5d5cc4831edd4c716d13365f818a8508 705 Pfam PF04122 Putative cell wall binding repeat 2 254 340 1.7E-9 T 13-10-2018 IPR007253 Putative cell wall binding repeat 2 COP00_13210 5d5cc4831edd4c716d13365f818a8508 705 Pfam PF04122 Putative cell wall binding repeat 2 63 152 3.7E-15 T 13-10-2018 IPR007253 Putative cell wall binding repeat 2 COP00_13210 5d5cc4831edd4c716d13365f818a8508 705 Gene3D G3DSA:3.40.50.12090 88 181 4.6E-6 T 13-10-2018 COP00_13210 5d5cc4831edd4c716d13365f818a8508 705 Gene3D G3DSA:3.40.50.12090 182 272 1.4E-5 T 13-10-2018 COP00_13210 5d5cc4831edd4c716d13365f818a8508 705 TIGRFAM TIGR02669 SpoIID_LytB: SpoIID/LytB domain 417 703 1.5E-79 T 13-10-2018 IPR013486 Sporulation stage II protein D, amidase enhancer LytB GO:0030435 COP00_13210 5d5cc4831edd4c716d13365f818a8508 705 Pfam PF08486 Stage II sporulation protein 417 492 8.3E-24 T 13-10-2018 IPR013693 Sporulation stage II protein D, amidase enhancer LytB N-terminal COP00_06125 afab44d0fd84dfd442ae9022fe5ccff1 440 PIRSF PIRSF006351 5 439 6.4E-127 T 13-10-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 COP00_06125 afab44d0fd84dfd442ae9022fe5ccff1 440 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 16 433 2.8E-101 T 13-10-2018 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 COP00_06125 afab44d0fd84dfd442ae9022fe5ccff1 440 Pfam PF02378 Phosphotransferase system, EIIC 33 365 2.0E-46 T 13-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 COP00_18825 df53262e21b89daaab5bc7d5981b4674 727 TIGRFAM TIGR01056 topB: DNA topoisomerase III 3 726 0.0 T 13-10-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 COP00_18825 df53262e21b89daaab5bc7d5981b4674 727 Pfam PF01751 Toprim domain 5 134 5.9E-13 T 13-10-2018 IPR006171 TOPRIM domain COP00_18825 df53262e21b89daaab5bc7d5981b4674 727 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 299 314 - T 13-10-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 COP00_18825 df53262e21b89daaab5bc7d5981b4674 727 SUPERFAMILY SSF56712 3 596 1.12E-178 T 13-10-2018 IPR023405 DNA topoisomerase, type IA, core domain COP00_18825 df53262e21b89daaab5bc7d5981b4674 727 Gene3D G3DSA:1.10.290.10 271 401 6.9E-150 T 13-10-2018 IPR013826 DNA topoisomerase, type IA, central region, subdomain 3 COP00_18825 df53262e21b89daaab5bc7d5981b4674 727 Hamap MF_00953 DNA topoisomerase 3 [topB]. 3 636 71.854 T 13-10-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 COP00_18825 df53262e21b89daaab5bc7d5981b4674 727 Gene3D G3DSA:3.40.50.140 4 154 1.3E-51 T 13-10-2018 COP00_18825 df53262e21b89daaab5bc7d5981b4674 727 SMART SM00493 3 126 2.8E-20 T 13-10-2018 IPR006171 TOPRIM domain COP00_18825 df53262e21b89daaab5bc7d5981b4674 727 Gene3D G3DSA:2.70.20.10 210 475 6.9E-150 T 13-10-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 COP00_18825 df53262e21b89daaab5bc7d5981b4674 727 Pfam PF01131 DNA topoisomerase 152 581 9.9E-125 T 13-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 COP00_18825 df53262e21b89daaab5bc7d5981b4674 727 SMART SM00437 262 547 1.9E-109 T 13-10-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 COP00_18825 df53262e21b89daaab5bc7d5981b4674 727 SMART SM00436 126 216 2.2E-44 T 13-10-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 COP00_18825 df53262e21b89daaab5bc7d5981b4674 727 Gene3D G3DSA:1.10.460.10 160 591 6.9E-150 T 13-10-2018 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 COP00_18825 df53262e21b89daaab5bc7d5981b4674 727 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 305 314 2.0E-28 T 13-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 COP00_18825 df53262e21b89daaab5bc7d5981b4674 727 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 510 524 2.0E-28 T 13-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 COP00_18825 df53262e21b89daaab5bc7d5981b4674 727 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 100 113 2.0E-28 T 13-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 COP00_18825 df53262e21b89daaab5bc7d5981b4674 727 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 186 204 2.0E-28 T 13-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 COP00_18825 df53262e21b89daaab5bc7d5981b4674 727 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 387 403 2.0E-28 T 13-10-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 COP00_18060 bfd550758ad4892f8f4a6fb6fb86b0d3 382 Gene3D G3DSA:3.40.630.10 11 355 1.8E-88 T 13-10-2018 COP00_18060 bfd550758ad4892f8f4a6fb6fb86b0d3 382 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 11 358 1.2E-104 T 13-10-2018 IPR017439 Amidohydrolase GO:0016787 COP00_18060 bfd550758ad4892f8f4a6fb6fb86b0d3 382 Pfam PF07687 Peptidase dimerisation domain 169 260 2.6E-12 T 13-10-2018 IPR011650 Peptidase M20, dimerisation domain COP00_18060 bfd550758ad4892f8f4a6fb6fb86b0d3 382 PIRSF PIRSF005962 1 373 9.6E-107 T 13-10-2018 IPR017439 Amidohydrolase GO:0016787 COP00_18060 bfd550758ad4892f8f4a6fb6fb86b0d3 382 Pfam PF01546 Peptidase family M20/M25/M40 68 367 4.2E-25 T 13-10-2018 IPR002933 Peptidase M20 GO:0016787 COP00_18060 bfd550758ad4892f8f4a6fb6fb86b0d3 382 SUPERFAMILY SSF53187 3 370 3.83E-66 T 13-10-2018 COP00_18060 bfd550758ad4892f8f4a6fb6fb86b0d3 382 Gene3D G3DSA:3.30.70.360 168 280 1.8E-88 T 13-10-2018 COP00_18060 bfd550758ad4892f8f4a6fb6fb86b0d3 382 SUPERFAMILY SSF55031 171 275 1.5E-21 T 13-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain COP00_17050 fbf8b266a77d7b20015f405b9e575bc1 393 Pfam PF07690 Major Facilitator Superfamily 10 338 8.1E-41 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 COP00_17050 fbf8b266a77d7b20015f405b9e575bc1 393 Gene3D G3DSA:1.20.1250.20 2 376 1.0E-47 T 13-10-2018 COP00_17050 fbf8b266a77d7b20015f405b9e575bc1 393 SUPERFAMILY SSF103473 5 377 3.79E-58 T 13-10-2018 IPR036259 MFS transporter superfamily COP00_01205 bd01f98f02673b1846f0fdbb2a2451ce 317 Gene3D G3DSA:3.40.366.10 6 286 3.5E-101 T 13-10-2018 IPR001227 Acyl transferase domain superfamily GO:0016740 COP00_01205 bd01f98f02673b1846f0fdbb2a2451ce 317 Pfam PF00698 Acyl transferase domain 6 291 3.4E-43 T 13-10-2018 IPR014043 Acyl transferase COP00_01205 bd01f98f02673b1846f0fdbb2a2451ce 317 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 7 302 1.3E-46 T 13-10-2018 IPR020801 Polyketide synthase, acyl transferase domain COP00_01205 bd01f98f02673b1846f0fdbb2a2451ce 317 Gene3D G3DSA:3.30.70.250 126 199 3.5E-101 T 13-10-2018 COP00_01205 bd01f98f02673b1846f0fdbb2a2451ce 317 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 3 291 2.6E-123 T 13-10-2018 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 COP00_01205 bd01f98f02673b1846f0fdbb2a2451ce 317 PIRSF PIRSF000446 1 311 2.4E-130 T 13-10-2018 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 COP00_01205 bd01f98f02673b1846f0fdbb2a2451ce 317 SUPERFAMILY SSF52151 4 310 1.8E-82 T 13-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase COP00_01205 bd01f98f02673b1846f0fdbb2a2451ce 317 SUPERFAMILY SSF55048 128 193 1.83E-15 T 13-10-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding COP00_15180 af2ce2f2bad0a0b9b176485bbd015728 433 PIRSF PIRSF000478 1 433 3.7E-172 T 13-10-2018 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 COP00_15180 af2ce2f2bad0a0b9b176485bbd015728 433 SUPERFAMILY SSF47648 1 69 3.53E-23 T 13-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 COP00_15180 af2ce2f2bad0a0b9b176485bbd015728 433 Gene3D G3DSA:1.20.970.10 1 67 1.2E-29 T 13-10-2018 COP00_15180 af2ce2f2bad0a0b9b176485bbd015728 433 Gene3D G3DSA:3.40.1030.10 69 335 1.3E-118 T 13-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 COP00_15180 af2ce2f2bad0a0b9b176485bbd015728 433 Pfam PF02885 Glycosyl transferase family, helical bundle domain 4 66 3.1E-20 T 13-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 COP00_15180 af2ce2f2bad0a0b9b176485bbd015728 433 SUPERFAMILY SSF52418 69 329 6.93E-93 T 13-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 COP00_15180 af2ce2f2bad0a0b9b176485bbd015728 433 SMART SM00941 345 418 4.9E-35 T 13-10-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 COP00_15180 af2ce2f2bad0a0b9b176485bbd015728 433 Pfam PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain 345 418 1.9E-28 T 13-10-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 COP00_15180 af2ce2f2bad0a0b9b176485bbd015728 433 Gene3D G3DSA:3.90.1170.30 336 423 1.9E-35 T 13-10-2018 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 COP00_15180 af2ce2f2bad0a0b9b176485bbd015728 433 Pfam PF00591 Glycosyl transferase family, a/b domain 78 306 9.7E-51 T 13-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 COP00_15180 af2ce2f2bad0a0b9b176485bbd015728 433 ProSitePatterns PS00647 Thymidine and pyrimidine-nucleoside phosphorylases signature. 110 125 - T 13-10-2018 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 COP00_15180 af2ce2f2bad0a0b9b176485bbd015728 433 SUPERFAMILY SSF54680 331 431 6.67E-30 T 13-10-2018 IPR036566 Pyrimidine nucleoside phosphorylase-like, C-terminal domain superfamily GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 COP00_15180 af2ce2f2bad0a0b9b176485bbd015728 433 TIGRFAM TIGR02644 Y_phosphoryl: pyrimidine-nucleoside phosphorylase 3 417 5.1E-183 T 13-10-2018 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic GO:0006213|GO:0016154 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181|Reactome: R-HSA-73614|Reactome: R-HSA-73621 COP00_05460 03ba94f2fe796ea82cc6b4bcae4527bd 320 Pfam PF10720 Protein of unknown function (DUF2515) 13 310 1.1E-129 T 13-10-2018 IPR019658 Protein of unknown function DUF2515 COP00_18760 65c19dd2675c16de6b532e2ea6afcdf0 214 SUPERFAMILY SSF52266 4 201 1.15E-26 T 13-10-2018 COP00_18760 65c19dd2675c16de6b532e2ea6afcdf0 214 Gene3D G3DSA:3.40.50.1110 5 204 2.1E-26 T 13-10-2018 IPR036514 SGNH hydrolase superfamily COP00_18760 65c19dd2675c16de6b532e2ea6afcdf0 214 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 7 196 3.1E-20 T 13-10-2018 IPR013830 SGNH hydrolase-type esterase domain COP00_03045 ba5f0ed8a2ee681bee4243e63a640521 283 PRINTS PR00108 Thymidylate synthase family signature 160 175 4.3E-18 T 13-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 COP00_03045 ba5f0ed8a2ee681bee4243e63a640521 283 PRINTS PR00108 Thymidylate synthase family signature 178 204 4.3E-18 T 13-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 COP00_03045 ba5f0ed8a2ee681bee4243e63a640521 283 PRINTS PR00108 Thymidylate synthase family signature 134 153 4.3E-18 T 13-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 COP00_03045 ba5f0ed8a2ee681bee4243e63a640521 283 PRINTS PR00108 Thymidylate synthase family signature 59 80 4.3E-18 T 13-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 COP00_03045 ba5f0ed8a2ee681bee4243e63a640521 283 PRINTS PR00108 Thymidylate synthase family signature 216 233 4.3E-18 T 13-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 COP00_03045 ba5f0ed8a2ee681bee4243e63a640521 283 Pfam PF00303 Thymidylate synthase 17 283 2.1E-74 T 13-10-2018 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 COP00_03045 ba5f0ed8a2ee681bee4243e63a640521 283 Gene3D G3DSA:3.30.572.10 7 283 1.1E-88 T 13-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 COP00_03045 ba5f0ed8a2ee681bee4243e63a640521 283 SUPERFAMILY SSF55831 13 283 4.19E-78 T 13-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 COP00_03045 ba5f0ed8a2ee681bee4243e63a640521 283 Hamap MF_00008 Thymidylate synthase [thyA]. 9 283 32.68 T 13-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 COP00_03045 ba5f0ed8a2ee681bee4243e63a640521 283 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 101 283 2.7E-41 T 13-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 COP00_18605 f58a6f00e024d7a68f1420732ba689e6 471 SUPERFAMILY SSF103473 8 465 1.7E-69 T 13-10-2018 IPR036259 MFS transporter superfamily COP00_18605 f58a6f00e024d7a68f1420732ba689e6 471 Gene3D G3DSA:1.20.1720.10 15 224 1.5E-41 T 13-10-2018 COP00_18605 f58a6f00e024d7a68f1420732ba689e6 471 Gene3D G3DSA:1.20.1250.20 260 468 1.8E-23 T 13-10-2018 COP00_18605 f58a6f00e024d7a68f1420732ba689e6 471 Pfam PF07690 Major Facilitator Superfamily 20 410 3.1E-55 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 COP00_18605 f58a6f00e024d7a68f1420732ba689e6 471 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 17 423 2.2E-113 T 13-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 COP00_18605 f58a6f00e024d7a68f1420732ba689e6 471 PRINTS PR01036 Tetracycline resistance protein TetB signature 303 327 5.2E-10 T 13-10-2018 COP00_18605 f58a6f00e024d7a68f1420732ba689e6 471 PRINTS PR01036 Tetracycline resistance protein TetB signature 139 163 5.2E-10 T 13-10-2018 COP00_18605 f58a6f00e024d7a68f1420732ba689e6 471 PRINTS PR01036 Tetracycline resistance protein TetB signature 18 42 5.2E-10 T 13-10-2018 COP00_18605 f58a6f00e024d7a68f1420732ba689e6 471 PRINTS PR01036 Tetracycline resistance protein TetB signature 109 129 5.2E-10 T 13-10-2018 COP00_21010 857ea3416b42eea3a09a7e8eb49bc203 528 SUPERFAMILY SSF55604 453 526 6.15E-19 T 13-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 COP00_21010 857ea3416b42eea3a09a7e8eb49bc203 528 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 465 482 - T 13-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 COP00_21010 857ea3416b42eea3a09a7e8eb49bc203 528 Gene3D G3DSA:3.30.1360.60 448 528 2.2E-25 T 13-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 COP00_21010 857ea3416b42eea3a09a7e8eb49bc203 528 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 408 512 6.8E-24 T 13-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 COP00_21010 857ea3416b42eea3a09a7e8eb49bc203 528 TIGRFAM TIGR00852 pts-Glc: PTS system, maltose and glucose-specific subfamily, IIC component 59 357 6.2E-88 T 13-10-2018 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component GO:0008982|GO:0009401|GO:0016021 COP00_21010 857ea3416b42eea3a09a7e8eb49bc203 528 Pfam PF02378 Phosphotransferase system, EIIC 10 345 8.6E-75 T 13-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 COP00_21010 857ea3416b42eea3a09a7e8eb49bc203 528 Pfam PF00367 phosphotransferase system, EIIB 457 486 7.9E-14 T 13-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 COP00_21010 857ea3416b42eea3a09a7e8eb49bc203 528 TIGRFAM TIGR02005 PTS-IIBC-alpha: PTS system, alpha-glucoside-specific IIBC component 2 526 1.6E-265 T 13-10-2018 IPR010975 Phosphotransferase system, alpha-glucoside-specific IIBC component GO:0008982|GO:0009401 COP00_12865 ed4dbe2022004927b8ab783afaef0e5a 194 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 31 174 2.4E-63 T 13-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 COP00_12865 ed4dbe2022004927b8ab783afaef0e5a 194 Gene3D G3DSA:3.30.230.40 90 194 4.9E-40 T 13-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 COP00_12865 ed4dbe2022004927b8ab783afaef0e5a 194 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 156 168 - T 13-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 COP00_12865 ed4dbe2022004927b8ab783afaef0e5a 194 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 2 194 42.233 T 13-10-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 COP00_12865 ed4dbe2022004927b8ab783afaef0e5a 194 Gene3D G3DSA:3.30.230.40 1 89 3.6E-36 T 13-10-2018 IPR038494 Imidazole glycerol phosphate dehydratase domain superfamily KEGG: 00340+4.2.1.19 COP00_12865 ed4dbe2022004927b8ab783afaef0e5a 194 SUPERFAMILY SSF54211 87 178 6.32E-35 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold COP00_12865 ed4dbe2022004927b8ab783afaef0e5a 194 SUPERFAMILY SSF54211 1 86 1.13E-31 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold COP00_12865 ed4dbe2022004927b8ab783afaef0e5a 194 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 61 74 - T 13-10-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 COP00_01010 e541cb59ed75a5bed2fb7e4a9d5c0fc0 1071 Gene3D G3DSA:3.40.50.20 547 655 7.8E-46 T 13-10-2018 COP00_01010 e541cb59ed75a5bed2fb7e4a9d5c0fc0 1071 SUPERFAMILY SSF52440 549 668 5.75E-48 T 13-10-2018 IPR016185 Pre-ATP-grasp domain superfamily COP00_01010 e541cb59ed75a5bed2fb7e4a9d5c0fc0 1071 SUPERFAMILY SSF52440 1 127 1.73E-50 T 13-10-2018 IPR016185 Pre-ATP-grasp domain superfamily COP00_01010 e541cb59ed75a5bed2fb7e4a9d5c0fc0 1071 Pfam PF02142 MGS-like domain 953 1036 3.8E-17 T 13-10-2018 IPR011607 Methylglyoxal synthase-like domain COP00_01010 e541cb59ed75a5bed2fb7e4a9d5c0fc0 1071 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 702 716 - T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 COP00_01010 e541cb59ed75a5bed2fb7e4a9d5c0fc0 1071 Gene3D G3DSA:3.40.50.20 1 116 5.7E-49 T 13-10-2018 COP00_01010 e541cb59ed75a5bed2fb7e4a9d5c0fc0 1071 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1066 13.536 T 13-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 COP00_01010 e541cb59ed75a5bed2fb7e4a9d5c0fc0 1071 SMART SM01096 420 540 4.2E-68 T 13-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 COP00_01010 e541cb59ed75a5bed2fb7e4a9d5c0fc0 1071 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1057 13.171 T 13-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 COP00_01010 e541cb59ed75a5bed2fb7e4a9d5c0fc0 1071 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 666 866 8.2E-39 T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 COP00_01010 e541cb59ed75a5bed2fb7e4a9d5c0fc0 1071 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 333 2.5E-78 T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 COP00_01010 e541cb59ed75a5bed2fb7e4a9d5c0fc0 1071 SMART SM00851 949 1036 3.9E-25 T 13-10-2018 IPR011607 Methylglyoxal synthase-like domain COP00_01010 e541cb59ed75a5bed2fb7e4a9d5c0fc0 1071 Gene3D G3DSA:3.40.50.1380 930 1061 3.9E-35 T 13-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily COP00_01010 e541cb59ed75a5bed2fb7e4a9d5c0fc0 1071 SUPERFAMILY SSF48108 395 547 1.57E-50 T 13-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 COP00_01010 e541cb59ed75a5bed2fb7e4a9d5c0fc0 1071 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1047 0.0 T 13-10-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 COP00_01010 e541cb59ed75a5bed2fb7e4a9d5c0fc0 1071 SUPERFAMILY SSF56059 666 927 1.77E-101 T 13-10-2018 COP00_01010 e541cb59ed75a5bed2fb7e4a9d5c0fc0 1071 Gene3D G3DSA:3.30.470.20 120 401 9.0E-125 T 13-10-2018 COP00_01010 e541cb59ed75a5bed2fb7e4a9d5c0fc0 1071 SUPERFAMILY SSF56059 128 399 2.47E-108 T 13-10-2018 COP00_01010 e541cb59ed75a5bed2fb7e4a9d5c0fc0 1071 SUPERFAMILY SSF52335 935 1052 1.57E-31 T 13-10-2018 IPR036914 Methylglyoxal synthase-like domain superfamily COP00_01010 e541cb59ed75a5bed2fb7e4a9d5c0fc0 1071 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 164 178 - T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 COP00_01010 e541cb59ed75a5bed2fb7e4a9d5c0fc0 1071 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 423 540 1.6E-41 T 13-10-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 COP00_01010 e541cb59ed75a5bed2fb7e4a9d5c0fc0 1071 Gene3D G3DSA:1.10.1030.10 402 546 3.3E-46 T 13-10-2018 IPR036897 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 COP00_01010 e541cb59ed75a5bed2fb7e4a9d5c0fc0 1071 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 296 303 - T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 COP00_01010 e541cb59ed75a5bed2fb7e4a9d5c0fc0 1071 Gene3D G3DSA:3.30.470.20 659 929 3.9E-106 T 13-10-2018 COP00_01010 e541cb59ed75a5bed2fb7e4a9d5c0fc0 1071 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 378 396 6.5E-64 T 13-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 COP00_01010 e541cb59ed75a5bed2fb7e4a9d5c0fc0 1071 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 6.5E-64 T 13-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 COP00_01010 e541cb59ed75a5bed2fb7e4a9d5c0fc0 1071 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 6.5E-64 T 13-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 COP00_01010 e541cb59ed75a5bed2fb7e4a9d5c0fc0 1071 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 6.5E-64 T 13-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 COP00_01010 e541cb59ed75a5bed2fb7e4a9d5c0fc0 1071 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 296 325 6.5E-64 T 13-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 COP00_01010 e541cb59ed75a5bed2fb7e4a9d5c0fc0 1071 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 6.5E-64 T 13-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 COP00_01010 e541cb59ed75a5bed2fb7e4a9d5c0fc0 1071 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 6.5E-64 T 13-10-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 COP00_01010 e541cb59ed75a5bed2fb7e4a9d5c0fc0 1071 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 830 837 - T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 COP00_11885 d4c57a6d359c0d5b891897eda10a17fe 157 ProSitePatterns PS01317 SsrA-binding protein. 27 39 - T 13-10-2018 IPR020081 SsrA-binding protein, conserved site COP00_11885 d4c57a6d359c0d5b891897eda10a17fe 157 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 9 117 4.0E-58 T 13-10-2018 IPR000037 SsrA-binding protein GO:0003723 COP00_11885 d4c57a6d359c0d5b891897eda10a17fe 157 SUPERFAMILY SSF74982 4 132 8.37E-54 T 13-10-2018 IPR023620 Small protein B COP00_11885 d4c57a6d359c0d5b891897eda10a17fe 157 Hamap MF_00023 SsrA-binding protein [smpB]. 1 155 78.942 T 13-10-2018 IPR000037 SsrA-binding protein GO:0003723 COP00_11885 d4c57a6d359c0d5b891897eda10a17fe 157 Pfam PF01668 SmpB protein 10 150 1.5E-63 T 13-10-2018 IPR000037 SsrA-binding protein GO:0003723 COP00_11885 d4c57a6d359c0d5b891897eda10a17fe 157 Gene3D G3DSA:2.40.280.10 3 129 4.5E-52 T 13-10-2018 IPR023620 Small protein B COP00_11885 d4c57a6d359c0d5b891897eda10a17fe 157 TIGRFAM TIGR00086 smpB: SsrA-binding protein 9 149 5.1E-61 T 13-10-2018 IPR000037 SsrA-binding protein GO:0003723 COP00_09310 049447be51f2669aa62affc7189851bd 200 SMART SM01390 3 91 1.0E-47 T 13-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 COP00_09310 049447be51f2669aa62affc7189851bd 200 SMART SM00363 92 156 5.4E-20 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 COP00_09310 049447be51f2669aa62affc7189851bd 200 ProSitePatterns PS00632 Ribosomal protein S4 signature. 90 114 - T 13-10-2018 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 COP00_09310 049447be51f2669aa62affc7189851bd 200 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 91 3.4E-29 T 13-10-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 COP00_09310 049447be51f2669aa62affc7189851bd 200 Gene3D G3DSA:3.10.290.10 91 185 7.1E-79 T 13-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 COP00_09310 049447be51f2669aa62affc7189851bd 200 SUPERFAMILY SSF55174 2 200 2.71E-70 T 13-10-2018 COP00_09310 049447be51f2669aa62affc7189851bd 200 Pfam PF01479 S4 domain 93 139 1.4E-21 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 COP00_09310 049447be51f2669aa62affc7189851bd 200 Gene3D G3DSA:1.10.1050.10 6 200 7.1E-79 T 13-10-2018 COP00_09310 049447be51f2669aa62affc7189851bd 200 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 200 36.879 T 13-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 COP00_09310 049447be51f2669aa62affc7189851bd 200 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 200 2.7E-88 T 13-10-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 COP00_15940 f85409557429265546b7126390f09e17 378 PIRSF PIRSF000804 1 378 1.3E-118 T 13-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 COP00_15940 f85409557429265546b7126390f09e17 378 Pfam PF02767 DNA polymerase III beta subunit, central domain 136 251 2.6E-40 T 13-10-2018 IPR022637 DNA polymerase III, beta sliding clamp, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 COP00_15940 f85409557429265546b7126390f09e17 378 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 127 8.4E-41 T 13-10-2018 IPR022634 DNA polymerase III, beta sliding clamp, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 COP00_15940 f85409557429265546b7126390f09e17 378 Gene3D G3DSA:3.10.150.10 1 250 3.4E-143 T 13-10-2018 COP00_15940 f85409557429265546b7126390f09e17 378 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 254 376 6.1E-40 T 13-10-2018 IPR022635 DNA polymerase III, beta sliding clamp, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 COP00_15940 f85409557429265546b7126390f09e17 378 SUPERFAMILY SSF55979 133 251 6.48E-28 T 13-10-2018 COP00_15940 f85409557429265546b7126390f09e17 378 Gene3D G3DSA:3.70.10.10 145 375 3.4E-143 T 13-10-2018 COP00_15940 f85409557429265546b7126390f09e17 378 SMART SM00480 17 373 1.2E-182 T 13-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 COP00_15940 f85409557429265546b7126390f09e17 378 SUPERFAMILY SSF55979 1 127 8.3E-23 T 13-10-2018 COP00_15940 f85409557429265546b7126390f09e17 378 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 377 2.1E-135 T 13-10-2018 IPR001001 DNA polymerase III, beta sliding clamp GO:0003677|GO:0006260|GO:0009360 COP00_15940 f85409557429265546b7126390f09e17 378 SUPERFAMILY SSF55979 253 377 9.95E-33 T 13-10-2018 COP00_07430 856b545974a2069cdf69192e8ccc92db 46 Gene3D G3DSA:1.10.287.1100 4 37 3.7E-19 T 13-10-2018 IPR036916 Sporulation inhibitor A superfamily COP00_07430 856b545974a2069cdf69192e8ccc92db 46 SUPERFAMILY SSF100985 1 44 7.06E-16 T 13-10-2018 IPR036916 Sporulation inhibitor A superfamily COP00_07430 856b545974a2069cdf69192e8ccc92db 46 Pfam PF08970 Sporulation inhibitor A 1 44 2.3E-21 T 13-10-2018 IPR015064 Sporulation inhibitor A COP00_24150 d92f97ad8479f047af28f2b9dcb4b223 179 Pfam PF03079 ARD/ARD' family 3 169 4.5E-49 T 13-10-2018 IPR004313 Acireductone dioxygenase ARD family GO:0010309|GO:0055114 KEGG: 00270+1.13.11.54|MetaCyc: PWY-4361|Reactome: R-HSA-1237112 COP00_24150 d92f97ad8479f047af28f2b9dcb4b223 179 Hamap MF_01682 Acireductone dioxygenase [mtnD]. 1 176 30.01 T 13-10-2018 IPR023956 Acireductone dioxygenase ARD, bacteria GO:0005506|GO:0010308|GO:0010309|GO:0016151|GO:0019284|GO:0055114 KEGG: 00270+1.13.11.54+1.13.11.53|MetaCyc: PWY-4361|MetaCyc: PWY-5389 COP00_24150 d92f97ad8479f047af28f2b9dcb4b223 179 SUPERFAMILY SSF51182 7 174 1.19E-31 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily COP00_24150 d92f97ad8479f047af28f2b9dcb4b223 179 Gene3D G3DSA:2.60.120.10 1 171 3.1E-59 T 13-10-2018 IPR014710 RmlC-like jelly roll fold COP00_18940 e3f7595f87d135d451abe3c5877a2f58 526 SUPERFAMILY SSF103190 39 168 1.73E-33 T 13-10-2018 IPR029151 Periplasmic sensor-like domain superfamily COP00_18940 e3f7595f87d135d451abe3c5877a2f58 526 SUPERFAMILY SSF55785 211 307 2.14E-7 T 13-10-2018 IPR035965 PAS domain superfamily COP00_18940 e3f7595f87d135d451abe3c5877a2f58 526 Pfam PF17203 Single cache domain 3 40 162 7.0E-18 T 13-10-2018 IPR033463 Single cache domain 3 COP00_18940 e3f7595f87d135d451abe3c5877a2f58 526 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 318 375 2.2E-11 T 13-10-2018 IPR039506 SpoOB, alpha-helical domain COP00_18940 e3f7595f87d135d451abe3c5877a2f58 526 Gene3D G3DSA:1.10.287.130 311 375 3.0E-5 T 13-10-2018 COP00_18940 e3f7595f87d135d451abe3c5877a2f58 526 PRINTS PR00344 Bacterial sensor protein C-terminal signature 487 505 6.1E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 COP00_18940 e3f7595f87d135d451abe3c5877a2f58 526 PRINTS PR00344 Bacterial sensor protein C-terminal signature 457 471 6.1E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 COP00_18940 e3f7595f87d135d451abe3c5877a2f58 526 PRINTS PR00344 Bacterial sensor protein C-terminal signature 511 524 6.1E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 COP00_18940 e3f7595f87d135d451abe3c5877a2f58 526 SUPERFAMILY SSF55890 319 386 3.79E-14 T 13-10-2018 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB GO:0000155|GO:0000160|GO:0016772 COP00_18940 e3f7595f87d135d451abe3c5877a2f58 526 Gene3D G3DSA:3.30.450.20 199 310 1.7E-23 T 13-10-2018 COP00_18940 e3f7595f87d135d451abe3c5877a2f58 526 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 420 525 1.3E-16 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase COP00_18940 e3f7595f87d135d451abe3c5877a2f58 526 SMART SM00387 416 526 4.5E-18 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase COP00_18940 e3f7595f87d135d451abe3c5877a2f58 526 SMART SM00091 212 277 2.8E-4 T 13-10-2018 IPR000014 PAS domain COP00_18940 e3f7595f87d135d451abe3c5877a2f58 526 SUPERFAMILY SSF55874 398 524 5.11E-26 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily COP00_18940 e3f7595f87d135d451abe3c5877a2f58 526 Gene3D G3DSA:3.30.565.10 376 526 2.7E-27 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily COP00_18940 e3f7595f87d135d451abe3c5877a2f58 526 Gene3D G3DSA:3.30.450.20 33 162 7.4E-35 T 13-10-2018 COP00_01090 514a62af4d6f910e8a7e922f15bc903d 89 Hamap MF_01503 UPF0296 protein . 3 86 29.132 T 13-10-2018 IPR007169 Extracellular matrix regulatory protein A COP00_01090 514a62af4d6f910e8a7e922f15bc903d 89 ProDom PD063023 UPF0296 YLZA BA4010/GBAA4010/BAS3723 BLI01788/BL02292 BT9727_3613 BC3870 TM1690 CBDBA43 SYC0519_C BCE33L3631 5 78 5.0E-36 T 13-10-2018 IPR007169 Extracellular matrix regulatory protein A COP00_01090 514a62af4d6f910e8a7e922f15bc903d 89 Pfam PF04025 Domain of unknown function (DUF370) 5 77 1.1E-36 T 13-10-2018 IPR007169 Extracellular matrix regulatory protein A COP00_07370 b0fdef6d167a86e73249590075c6067e 775 Pfam PF13567 Domain of unknown function (DUF4131) 24 171 1.7E-19 T 13-10-2018 IPR025405 Domain of unknown function DUF4131 COP00_07370 b0fdef6d167a86e73249590075c6067e 775 SMART SM00849 510 721 2.2E-16 T 13-10-2018 IPR001279 Metallo-beta-lactamase COP00_07370 b0fdef6d167a86e73249590075c6067e 775 Gene3D G3DSA:3.60.15.10 498 763 6.1E-73 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like COP00_07370 b0fdef6d167a86e73249590075c6067e 775 TIGRFAM TIGR00361 ComEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 69 750 9.4E-174 T 13-10-2018 IPR004797 Competence protein ComEC/Rec2 GO:0016021|GO:0030420 COP00_07370 b0fdef6d167a86e73249590075c6067e 775 Pfam PF03772 Competence protein 209 468 1.7E-59 T 13-10-2018 IPR004477 ComEC/Rec2-related protein COP00_07370 b0fdef6d167a86e73249590075c6067e 775 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 230 399 2.3E-40 T 13-10-2018 IPR004477 ComEC/Rec2-related protein COP00_07370 b0fdef6d167a86e73249590075c6067e 775 Pfam PF00753 Metallo-beta-lactamase superfamily 508 720 1.9E-17 T 13-10-2018 IPR001279 Metallo-beta-lactamase COP00_07370 b0fdef6d167a86e73249590075c6067e 775 SUPERFAMILY SSF56281 502 756 1.49E-52 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like COP00_20510 3cd124457cf3ec2f198b7ba8f55526f9 629 Pfam PF00005 ABC transporter 341 469 8.9E-23 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 COP00_20510 3cd124457cf3ec2f198b7ba8f55526f9 629 Pfam PF16326 ABC transporter C-terminal domain 555 620 5.7E-15 T 13-10-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 COP00_20510 3cd124457cf3ec2f198b7ba8f55526f9 629 Gene3D G3DSA:3.40.50.300 3 280 1.9E-70 T 13-10-2018 COP00_20510 3cd124457cf3ec2f198b7ba8f55526f9 629 ProSitePatterns PS00211 ABC transporters family signature. 159 173 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 COP00_20510 3cd124457cf3ec2f198b7ba8f55526f9 629 SUPERFAMILY SSF52540 312 529 2.07E-45 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_20510 3cd124457cf3ec2f198b7ba8f55526f9 629 Pfam PF00005 ABC transporter 20 187 1.2E-27 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 COP00_20510 3cd124457cf3ec2f198b7ba8f55526f9 629 Pfam PF12848 ABC transporter 226 304 4.4E-14 T 13-10-2018 IPR032781 ABC-transporter extension domain COP00_20510 3cd124457cf3ec2f198b7ba8f55526f9 629 SMART SM00382 343 514 1.9E-12 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_20510 3cd124457cf3ec2f198b7ba8f55526f9 629 SMART SM00382 28 231 1.2E-12 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_20510 3cd124457cf3ec2f198b7ba8f55526f9 629 Gene3D G3DSA:1.10.287.380 550 624 6.2E-11 T 13-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 COP00_20510 3cd124457cf3ec2f198b7ba8f55526f9 629 Gene3D G3DSA:3.40.50.300 281 549 1.3E-61 T 13-10-2018 COP00_20510 3cd124457cf3ec2f198b7ba8f55526f9 629 SUPERFAMILY SSF52540 3 249 5.66E-51 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_10130 069a7293b9dc6be1114af62c51bb491e 406 Gene3D G3DSA:2.40.30.10 151 261 6.4E-37 T 13-10-2018 COP00_10130 069a7293b9dc6be1114af62c51bb491e 406 PRINTS PR00410 Phenol hydroxylase reductase family signature 270 289 1.5E-8 T 13-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 COP00_10130 069a7293b9dc6be1114af62c51bb491e 406 PRINTS PR00410 Phenol hydroxylase reductase family signature 365 373 1.5E-8 T 13-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 COP00_10130 069a7293b9dc6be1114af62c51bb491e 406 PRINTS PR00410 Phenol hydroxylase reductase family signature 185 197 1.5E-8 T 13-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 COP00_10130 069a7293b9dc6be1114af62c51bb491e 406 PRINTS PR00410 Phenol hydroxylase reductase family signature 295 304 1.5E-8 T 13-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 COP00_10130 069a7293b9dc6be1114af62c51bb491e 406 Pfam PF00042 Globin 7 102 9.5E-9 T 13-10-2018 IPR000971 Globin GO:0020037 COP00_10130 069a7293b9dc6be1114af62c51bb491e 406 SUPERFAMILY SSF52343 266 399 4.85E-40 T 13-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain COP00_10130 069a7293b9dc6be1114af62c51bb491e 406 SUPERFAMILY SSF46458 2 143 2.33E-38 T 13-10-2018 IPR009050 Globin-like superfamily COP00_10130 069a7293b9dc6be1114af62c51bb491e 406 SUPERFAMILY SSF63380 151 261 2.89E-27 T 13-10-2018 IPR017938 Riboflavin synthase-like beta-barrel COP00_10130 069a7293b9dc6be1114af62c51bb491e 406 Gene3D G3DSA:1.10.490.10 1 144 6.2E-54 T 13-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 COP00_10130 069a7293b9dc6be1114af62c51bb491e 406 Pfam PF00175 Oxidoreductase NAD-binding domain 271 378 3.9E-17 T 13-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 COP00_10130 069a7293b9dc6be1114af62c51bb491e 406 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 185 195 2.7E-6 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 COP00_10130 069a7293b9dc6be1114af62c51bb491e 406 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 206 213 2.7E-6 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 COP00_10130 069a7293b9dc6be1114af62c51bb491e 406 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 365 373 2.7E-6 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 COP00_10130 069a7293b9dc6be1114af62c51bb491e 406 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 235 244 2.7E-6 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 COP00_10130 069a7293b9dc6be1114af62c51bb491e 406 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 270 289 2.7E-6 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 COP00_10130 069a7293b9dc6be1114af62c51bb491e 406 Pfam PF00970 Oxidoreductase FAD-binding domain 158 260 2.2E-8 T 13-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 COP00_10130 069a7293b9dc6be1114af62c51bb491e 406 Gene3D G3DSA:3.40.50.80 262 402 1.9E-37 T 13-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain COP00_10130 069a7293b9dc6be1114af62c51bb491e 406 Hamap MF_01252 Flavohemoprotein [hmp]. 1 403 54.388 T 13-10-2018 IPR023950 Flavohemoprotein GO:0008941|GO:0019825|GO:0020037|GO:0051409|GO:0055114|GO:0071949 COP00_21960 74a75d76dbbec11fc33df78b98ccc016 121 TIGRFAM TIGR03601 B_an_ocin: bacteriocin, heterocycloanthracin/sonorensin family 7 91 1.6E-21 T 13-10-2018 IPR019890 Bacteriocin, heterocycloanthracin/sonorensin family COP00_00065 4ea1df59cd0fe2179044ca91377ac140 855 SMART SM00710 362 383 6700.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat COP00_00065 4ea1df59cd0fe2179044ca91377ac140 855 SMART SM00710 512 535 10000.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat COP00_00065 4ea1df59cd0fe2179044ca91377ac140 855 SMART SM00710 488 510 2300.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat COP00_00065 4ea1df59cd0fe2179044ca91377ac140 855 SMART SM00710 300 332 59.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat COP00_00065 4ea1df59cd0fe2179044ca91377ac140 855 SMART SM00710 334 355 4300.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat COP00_00065 4ea1df59cd0fe2179044ca91377ac140 855 SMART SM00710 277 299 2700.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat COP00_00065 4ea1df59cd0fe2179044ca91377ac140 855 Gene3D G3DSA:2.40.300.10 688 850 1.9E-64 T 13-10-2018 COP00_00065 4ea1df59cd0fe2179044ca91377ac140 855 Pfam PF12708 Pectate lyase superfamily protein 122 345 5.8E-15 T 13-10-2018 IPR024535 Pectate lyase superfamily protein COP00_00065 4ea1df59cd0fe2179044ca91377ac140 855 Pfam PF11962 Peptidase_G2, IMC autoproteolytic cleavage domain 635 851 1.1E-71 T 13-10-2018 IPR021865 Peptidase G2, IMC autoproteolytic cleavage domain COP00_00065 4ea1df59cd0fe2179044ca91377ac140 855 Gene3D G3DSA:2.160.20.10 114 567 5.2E-117 T 13-10-2018 IPR012334 Pectin lyase fold COP00_00065 4ea1df59cd0fe2179044ca91377ac140 855 Gene3D G3DSA:4.10.80.40 741 779 1.9E-64 T 13-10-2018 COP00_00065 4ea1df59cd0fe2179044ca91377ac140 855 SUPERFAMILY SSF51126 119 408 8.68E-34 T 13-10-2018 IPR011050 Pectin lyase fold/virulence factor COP00_11965 9e64d923541fde865ecaa36f5105f4bb 316 SUPERFAMILY SSF53807 40 310 7.61E-67 T 13-10-2018 COP00_11965 9e64d923541fde865ecaa36f5105f4bb 316 Gene3D G3DSA:3.40.50.1980 144 316 2.9E-61 T 13-10-2018 COP00_11965 9e64d923541fde865ecaa36f5105f4bb 316 Pfam PF01497 Periplasmic binding protein 57 287 7.6E-26 T 13-10-2018 IPR002491 ABC transporter periplasmic binding domain COP00_11965 9e64d923541fde865ecaa36f5105f4bb 316 Gene3D G3DSA:3.40.50.1980 35 142 7.2E-35 T 13-10-2018 COP00_01730 3799265a2161390880ee604082c7d808 348 SMART SM00382 56 227 3.1E-12 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_01730 3799265a2161390880ee604082c7d808 348 Pfam PF00154 recA bacterial DNA recombination protein 7 267 1.9E-147 T 13-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 COP00_01730 3799265a2161390880ee604082c7d808 348 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 3 323 1.2E-177 T 13-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 COP00_01730 3799265a2161390880ee604082c7d808 348 PRINTS PR00142 RecA protein signature 209 237 4.4E-85 T 13-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 COP00_01730 3799265a2161390880ee604082c7d808 348 PRINTS PR00142 RecA protein signature 242 271 4.4E-85 T 13-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 COP00_01730 3799265a2161390880ee604082c7d808 348 PRINTS PR00142 RecA protein signature 92 121 4.4E-85 T 13-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 COP00_01730 3799265a2161390880ee604082c7d808 348 PRINTS PR00142 RecA protein signature 126 155 4.4E-85 T 13-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 COP00_01730 3799265a2161390880ee604082c7d808 348 PRINTS PR00142 RecA protein signature 296 313 4.4E-85 T 13-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 COP00_01730 3799265a2161390880ee604082c7d808 348 PRINTS PR00142 RecA protein signature 164 193 4.4E-85 T 13-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 COP00_01730 3799265a2161390880ee604082c7d808 348 ProSitePatterns PS00321 recA signature. 212 220 - T 13-10-2018 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 COP00_01730 3799265a2161390880ee604082c7d808 348 Gene3D G3DSA:3.40.50.300 25 266 1.2E-82 T 13-10-2018 COP00_01730 3799265a2161390880ee604082c7d808 348 SUPERFAMILY SSF54752 267 326 7.72E-22 T 13-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal COP00_01730 3799265a2161390880ee604082c7d808 348 SUPERFAMILY SSF52540 3 266 3.83E-65 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_01730 3799265a2161390880ee604082c7d808 348 Gene3D G3DSA:3.30.250.10 267 346 4.9E-29 T 13-10-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal COP00_01730 3799265a2161390880ee604082c7d808 348 Hamap MF_00268 Protein RecA [recA]. 4 328 53.249 T 13-10-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 COP00_00845 32d3acc41eca7f1265238d73fd9fa282 451 Gene3D G3DSA:3.90.190.20 316 449 9.3E-42 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 COP00_00845 32d3acc41eca7f1265238d73fd9fa282 451 Pfam PF08245 Mur ligase middle domain 118 291 1.3E-33 T 13-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 COP00_00845 32d3acc41eca7f1265238d73fd9fa282 451 SUPERFAMILY SSF53623 104 309 1.44E-52 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 COP00_00845 32d3acc41eca7f1265238d73fd9fa282 451 SUPERFAMILY SSF51984 10 101 2.49E-16 T 13-10-2018 COP00_00845 32d3acc41eca7f1265238d73fd9fa282 451 Gene3D G3DSA:3.40.50.720 10 96 7.7E-27 T 13-10-2018 COP00_00845 32d3acc41eca7f1265238d73fd9fa282 451 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 10 450 36.026 T 13-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 COP00_00845 32d3acc41eca7f1265238d73fd9fa282 451 Pfam PF02875 Mur ligase family, glutamate ligase domain 312 377 1.9E-9 T 13-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 COP00_00845 32d3acc41eca7f1265238d73fd9fa282 451 Gene3D G3DSA:3.40.1190.10 103 309 7.0E-63 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 COP00_00845 32d3acc41eca7f1265238d73fd9fa282 451 SUPERFAMILY SSF53244 311 450 5.19E-42 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 COP00_00845 32d3acc41eca7f1265238d73fd9fa282 451 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 11 448 4.2E-147 T 13-10-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 COP00_05420 5a38a1f8c82e610ec35212931a2119af 759 SMART SM00487 59 263 2.0E-33 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain COP00_05420 5a38a1f8c82e610ec35212931a2119af 759 SUPERFAMILY SSF52540 77 453 3.64E-34 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_05420 5a38a1f8c82e610ec35212931a2119af 759 Gene3D G3DSA:3.40.50.300 273 433 3.4E-21 T 13-10-2018 COP00_05420 5a38a1f8c82e610ec35212931a2119af 759 Pfam PF00271 Helicase conserved C-terminal domain 292 396 6.8E-14 T 13-10-2018 IPR001650 Helicase, C-terminal COP00_05420 5a38a1f8c82e610ec35212931a2119af 759 SMART SM00490 314 397 7.8E-14 T 13-10-2018 IPR001650 Helicase, C-terminal COP00_05420 5a38a1f8c82e610ec35212931a2119af 759 SUPERFAMILY SSF52540 28 250 1.22E-44 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_05420 5a38a1f8c82e610ec35212931a2119af 759 Pfam PF00270 DEAD/DEAH box helicase 65 235 1.5E-27 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 COP00_05420 5a38a1f8c82e610ec35212931a2119af 759 Gene3D G3DSA:3.40.50.300 35 252 1.6E-48 T 13-10-2018 COP00_05420 5a38a1f8c82e610ec35212931a2119af 759 Pfam PF09369 Domain of unknown function (DUF1998) 661 737 5.7E-20 T 13-10-2018 IPR018973 DEAD/DEAH-box helicase, putative COP00_14340 cf8e720b0f49cf0f0ee0631f06158e1a 204 TIGRFAM TIGR02897 QoxC: cytochrome aa3 quinol oxidase, subunit III 14 202 2.1E-91 T 13-10-2018 IPR014246 Quinol oxidase subunit III GO:0015002|GO:0016021|GO:0042773 COP00_14340 cf8e720b0f49cf0f0ee0631f06158e1a 204 Gene3D G3DSA:1.20.120.80 18 202 3.3E-54 T 13-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 COP00_14340 cf8e720b0f49cf0f0ee0631f06158e1a 204 Pfam PF00510 Cytochrome c oxidase subunit III 25 200 4.2E-16 T 13-10-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 COP00_14340 cf8e720b0f49cf0f0ee0631f06158e1a 204 SUPERFAMILY SSF81452 21 200 4.71E-54 T 13-10-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 COP00_20070 13bf0f01ccbe32f0c9ea7052a8f51ccd 228 Gene3D G3DSA:3.40.50.1000 2 202 2.2E-70 T 13-10-2018 IPR023214 HAD superfamily COP00_20070 13bf0f01ccbe32f0c9ea7052a8f51ccd 228 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 71 188 7.7E-18 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 COP00_20070 13bf0f01ccbe32f0c9ea7052a8f51ccd 228 TIGRFAM TIGR01990 bPGM: beta-phosphoglucomutase 1 189 4.0E-82 T 13-10-2018 IPR010972 Beta-phosphoglucomutase GO:0000287|GO:0005975|GO:0008801 KEGG: 00500+5.4.2.6|MetaCyc: PWY-2721|MetaCyc: PWY-2722|MetaCyc: PWY-7459 COP00_20070 13bf0f01ccbe32f0c9ea7052a8f51ccd 228 Gene3D G3DSA:1.10.150.240 14 92 2.2E-70 T 13-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 COP00_20070 13bf0f01ccbe32f0c9ea7052a8f51ccd 228 TIGRFAM TIGR02009 PGMB-YQAB-SF: beta-phosphoglucomutase family hydrolase 1 188 1.4E-63 T 13-10-2018 IPR010976 Beta-phosphoglucomutase hydrolase COP00_20070 13bf0f01ccbe32f0c9ea7052a8f51ccd 228 SUPERFAMILY SSF56784 1 207 1.15E-46 T 13-10-2018 IPR036412 HAD-like superfamily COP00_20070 13bf0f01ccbe32f0c9ea7052a8f51ccd 228 Pfam PF13419 Haloacid dehalogenase-like hydrolase 4 188 1.1E-24 T 13-10-2018 COP00_14690 539097cffa4059e6fd0151f2f3b7977e 402 SUPERFAMILY SSF103473 16 398 2.49E-57 T 13-10-2018 IPR036259 MFS transporter superfamily COP00_14690 539097cffa4059e6fd0151f2f3b7977e 402 Pfam PF07690 Major Facilitator Superfamily 23 249 2.6E-29 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 COP00_14690 539097cffa4059e6fd0151f2f3b7977e 402 Gene3D G3DSA:1.20.1250.20 12 393 8.0E-54 T 13-10-2018 COP00_03710 b846d31c1728d8039f6e6a6e74333087 362 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 41 57 3.8E-7 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 COP00_03710 b846d31c1728d8039f6e6a6e74333087 362 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 27 41 3.8E-7 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 COP00_03710 b846d31c1728d8039f6e6a6e74333087 362 Pfam PF00392 Bacterial regulatory proteins, gntR family 5 67 4.2E-18 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 COP00_03710 b846d31c1728d8039f6e6a6e74333087 362 SUPERFAMILY SSF53822 82 358 5.69E-59 T 13-10-2018 IPR028082 Periplasmic binding protein-like I COP00_03710 b846d31c1728d8039f6e6a6e74333087 362 SMART SM00345 8 67 2.5E-17 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 COP00_03710 b846d31c1728d8039f6e6a6e74333087 362 Gene3D G3DSA:3.40.50.2300 187 352 7.9E-79 T 13-10-2018 COP00_03710 b846d31c1728d8039f6e6a6e74333087 362 Pfam PF13377 Periplasmic binding protein-like domain 196 357 1.0E-28 T 13-10-2018 COP00_03710 b846d31c1728d8039f6e6a6e74333087 362 Gene3D G3DSA:1.10.10.10 1 68 5.0E-22 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_03710 b846d31c1728d8039f6e6a6e74333087 362 Gene3D G3DSA:3.40.50.2300 84 349 7.9E-79 T 13-10-2018 COP00_03710 b846d31c1728d8039f6e6a6e74333087 362 SUPERFAMILY SSF46785 3 71 1.96E-18 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_14585 f20266f0a224f8cf61111a9c61b63921 101 SUPERFAMILY SSF52794 1 99 8.11E-36 T 13-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 COP00_14585 f20266f0a224f8cf61111a9c61b63921 101 Gene3D G3DSA:3.40.50.2300 1 101 4.0E-37 T 13-10-2018 COP00_14585 f20266f0a224f8cf61111a9c61b63921 101 TIGRFAM TIGR00853 pts-lac: PTS system, lactose/cellobiose family IIB component 2 93 2.0E-38 T 13-10-2018 IPR013012 Phosphotransferase system, EIIB component, type 3 GO:0008982|GO:0009401 COP00_14585 f20266f0a224f8cf61111a9c61b63921 101 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 2 93 6.7E-22 T 13-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 COP00_21990 61b499781957f9451002d9ca35f88771 66 Gene3D G3DSA:1.10.8.910 8 66 1.0E-29 T 13-10-2018 IPR038300 SASP, alpha/beta-type superfamily COP00_21990 61b499781957f9451002d9ca35f88771 66 ProSitePatterns PS00304 Small, acid-soluble spore proteins, alpha/beta type, signature 1. 23 32 - T 13-10-2018 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site GO:0003690|GO:0006265 COP00_21990 61b499781957f9451002d9ca35f88771 66 Pfam PF00269 Small, acid-soluble spore proteins, alpha/beta type 8 62 3.1E-21 T 13-10-2018 IPR001448 Small acid-soluble spore protein, alpha/beta-type GO:0003690|GO:0006265 COP00_21990 61b499781957f9451002d9ca35f88771 66 ProSitePatterns PS00684 Small, acid-soluble spore proteins, alpha/beta type, signature 2. 41 55 - T 13-10-2018 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site GO:0003690|GO:0006265 COP00_21695 5e6305a7817847c7e01f1a49f39f1e5d 580 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 210 317 3.6E-24 T 13-10-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 COP00_21695 5e6305a7817847c7e01f1a49f39f1e5d 580 Gene3D G3DSA:3.40.120.10 209 324 9.9E-24 T 13-10-2018 COP00_21695 5e6305a7817847c7e01f1a49f39f1e5d 580 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 510 571 4.8E-10 T 13-10-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 COP00_21695 5e6305a7817847c7e01f1a49f39f1e5d 580 SUPERFAMILY SSF53738 30 236 1.24E-48 T 13-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 COP00_21695 5e6305a7817847c7e01f1a49f39f1e5d 580 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 324 450 3.3E-24 T 13-10-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 COP00_21695 5e6305a7817847c7e01f1a49f39f1e5d 580 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 139 153 4.4E-5 T 13-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 COP00_21695 5e6305a7817847c7e01f1a49f39f1e5d 580 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 296 311 4.4E-5 T 13-10-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 COP00_21695 5e6305a7817847c7e01f1a49f39f1e5d 580 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 42 182 1.0E-43 T 13-10-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 COP00_21695 5e6305a7817847c7e01f1a49f39f1e5d 580 Gene3D G3DSA:3.40.120.10 34 188 2.1E-48 T 13-10-2018 COP00_21695 5e6305a7817847c7e01f1a49f39f1e5d 580 SUPERFAMILY SSF55957 446 573 7.59E-16 T 13-10-2018 IPR036900 Alpha-D-phosphohexomutase, C-terminal domain superfamily GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 COP00_21695 5e6305a7817847c7e01f1a49f39f1e5d 580 SUPERFAMILY SSF53738 215 312 1.06E-13 T 13-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 COP00_21695 5e6305a7817847c7e01f1a49f39f1e5d 580 SUPERFAMILY SSF53738 304 455 4.71E-33 T 13-10-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 COP00_21695 5e6305a7817847c7e01f1a49f39f1e5d 580 Gene3D G3DSA:3.40.120.10 325 452 1.3E-36 T 13-10-2018 COP00_21695 5e6305a7817847c7e01f1a49f39f1e5d 580 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 140 149 - T 13-10-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 COP00_21695 5e6305a7817847c7e01f1a49f39f1e5d 580 Gene3D G3DSA:3.30.310.50 480 573 1.7E-9 T 13-10-2018 COP00_18040 5bd225b41a2668fe7f54a8f017797da4 364 Pfam PF05816 Toxic anion resistance protein (TelA) 35 358 1.5E-108 T 13-10-2018 IPR008863 Toxic anion resistance COP00_18040 5bd225b41a2668fe7f54a8f017797da4 364 PIRSF PIRSF026508 1 363 2.3E-127 T 13-10-2018 IPR008863 Toxic anion resistance COP00_01605 2511baf1f7ea7dc44cd9c959da3cc54e 89 Gene3D G3DSA:1.10.287.10 2 89 1.1E-37 T 13-10-2018 COP00_01605 2511baf1f7ea7dc44cd9c959da3cc54e 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 4 89 5.4E-43 T 13-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_01605 2511baf1f7ea7dc44cd9c959da3cc54e 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 13-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 COP00_01605 2511baf1f7ea7dc44cd9c959da3cc54e 89 SMART SM01387 8 88 2.0E-52 T 13-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 COP00_01605 2511baf1f7ea7dc44cd9c959da3cc54e 89 SUPERFAMILY SSF47060 3 89 3.83E-37 T 13-10-2018 IPR009068 S15/NS1, RNA-binding COP00_01605 2511baf1f7ea7dc44cd9c959da3cc54e 89 Pfam PF00312 Ribosomal protein S15 8 88 1.8E-38 T 13-10-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 COP00_01605 2511baf1f7ea7dc44cd9c959da3cc54e 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 12 88 5.0E-38 T 13-10-2018 COP00_01605 2511baf1f7ea7dc44cd9c959da3cc54e 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 23.303 T 13-10-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_22045 837dbfda187e9f61feca4b2a8c3dd67c 193 SUPERFAMILY SSF56420 8 186 3.27E-56 T 13-10-2018 IPR036821 Peptide deformylase superfamily COP00_22045 837dbfda187e9f61feca4b2a8c3dd67c 193 Hamap MF_00163 Peptide deformylase [def]. 11 190 25.606 T 13-10-2018 IPR023635 Peptide deformylase COP00_22045 837dbfda187e9f61feca4b2a8c3dd67c 193 PIRSF PIRSF004749 5 193 1.3E-46 T 13-10-2018 IPR023635 Peptide deformylase COP00_22045 837dbfda187e9f61feca4b2a8c3dd67c 193 PRINTS PR01576 Peptide deformylase signature 148 177 8.1E-29 T 13-10-2018 IPR023635 Peptide deformylase COP00_22045 837dbfda187e9f61feca4b2a8c3dd67c 193 PRINTS PR01576 Peptide deformylase signature 55 84 8.1E-29 T 13-10-2018 IPR023635 Peptide deformylase COP00_22045 837dbfda187e9f61feca4b2a8c3dd67c 193 PRINTS PR01576 Peptide deformylase signature 116 127 8.1E-29 T 13-10-2018 IPR023635 Peptide deformylase COP00_22045 837dbfda187e9f61feca4b2a8c3dd67c 193 PRINTS PR01576 Peptide deformylase signature 129 147 8.1E-29 T 13-10-2018 IPR023635 Peptide deformylase COP00_22045 837dbfda187e9f61feca4b2a8c3dd67c 193 Gene3D G3DSA:3.90.45.10 2 189 3.7E-61 T 13-10-2018 IPR036821 Peptide deformylase superfamily COP00_22045 837dbfda187e9f61feca4b2a8c3dd67c 193 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 13 187 5.9E-44 T 13-10-2018 IPR023635 Peptide deformylase COP00_22045 837dbfda187e9f61feca4b2a8c3dd67c 193 Pfam PF01327 Polypeptide deformylase 12 179 2.8E-42 T 13-10-2018 IPR023635 Peptide deformylase COP00_23335 7a7b2b5f9550b5b2652df1f4f0903a00 145 Pfam PF05037 Protein of unknown function (DUF669) 2 131 1.9E-46 T 13-10-2018 IPR007731 Protein of unknown function DUF669 COP00_03180 7a7b2b5f9550b5b2652df1f4f0903a00 145 Pfam PF05037 Protein of unknown function (DUF669) 2 131 1.9E-46 T 13-10-2018 IPR007731 Protein of unknown function DUF669 COP00_19585 7a7b2b5f9550b5b2652df1f4f0903a00 145 Pfam PF05037 Protein of unknown function (DUF669) 2 131 1.9E-46 T 13-10-2018 IPR007731 Protein of unknown function DUF669 COP00_06720 1c11c6040418f28dc2e9bc2f5f9aeba9 486 Pfam PF02347 Glycine cleavage system P-protein 50 300 3.2E-8 T 13-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 COP00_06720 1c11c6040418f28dc2e9bc2f5f9aeba9 486 Gene3D G3DSA:3.40.640.10 86 327 1.4E-58 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 COP00_06720 1c11c6040418f28dc2e9bc2f5f9aeba9 486 Hamap MF_00713 Probable glycine dehydrogenase (decarboxylating) subunit 2 [gcvPB]. 7 485 60.109 T 13-10-2018 IPR023012 Probable glycine dehydrogenase (decarboxylating) subunit 2 GO:0004375|GO:0019464 KEGG: 00260+1.4.4.2 COP00_06720 1c11c6040418f28dc2e9bc2f5f9aeba9 486 Gene3D G3DSA:3.90.1150.10 338 470 5.2E-49 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 COP00_06720 1c11c6040418f28dc2e9bc2f5f9aeba9 486 SUPERFAMILY SSF53383 20 483 1.28E-113 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase COP00_07295 a2d3bf4b1a6c8dd20ca41748fabaef3c 451 SMART SM00729 143 361 1.0E-59 T 13-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 COP00_07295 a2d3bf4b1a6c8dd20ca41748fabaef3c 451 SUPERFAMILY SSF102114 126 363 2.49E-57 T 13-10-2018 COP00_07295 a2d3bf4b1a6c8dd20ca41748fabaef3c 451 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 147 167 - T 13-10-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 COP00_07295 a2d3bf4b1a6c8dd20ca41748fabaef3c 451 Pfam PF01938 TRAM domain 388 430 2.0E-4 T 13-10-2018 IPR002792 TRAM domain COP00_07295 a2d3bf4b1a6c8dd20ca41748fabaef3c 451 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 3 431 1.9E-151 T 13-10-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 COP00_07295 a2d3bf4b1a6c8dd20ca41748fabaef3c 451 Pfam PF04055 Radical SAM superfamily 149 319 5.2E-29 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 COP00_07295 a2d3bf4b1a6c8dd20ca41748fabaef3c 451 Gene3D G3DSA:3.80.30.20 140 374 1.8E-87 T 13-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe COP00_07295 a2d3bf4b1a6c8dd20ca41748fabaef3c 451 Gene3D G3DSA:3.40.50.12160 3 132 5.0E-24 T 13-10-2018 IPR038135 Methylthiotransferase, N-terminal domain superfamily COP00_07295 a2d3bf4b1a6c8dd20ca41748fabaef3c 451 Pfam PF00919 Uncharacterized protein family UPF0004 4 98 9.5E-26 T 13-10-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 COP00_07295 a2d3bf4b1a6c8dd20ca41748fabaef3c 451 TIGRFAM TIGR01579 MiaB-like-C: MiaB-like tRNA modifying enzyme 6 423 1.9E-142 T 13-10-2018 IPR006467 MiaB-like tRNA modifying enzyme GO:0016740 COP00_12390 d726ebf666a9efa48be62fddbea32f80 248 Pfam PF00574 Clp protease 48 185 2.6E-35 T 13-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA COP00_12390 d726ebf666a9efa48be62fddbea32f80 248 SUPERFAMILY SSF52096 16 187 1.9E-49 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily COP00_12390 d726ebf666a9efa48be62fddbea32f80 248 Gene3D G3DSA:3.90.226.10 8 201 3.3E-52 T 13-10-2018 COP00_12390 d726ebf666a9efa48be62fddbea32f80 248 PRINTS PR00127 Clp protease catalytic subunit P signature 55 75 8.1E-12 T 13-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 COP00_12390 d726ebf666a9efa48be62fddbea32f80 248 PRINTS PR00127 Clp protease catalytic subunit P signature 164 183 8.1E-12 T 13-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 COP00_12390 d726ebf666a9efa48be62fddbea32f80 248 PRINTS PR00127 Clp protease catalytic subunit P signature 86 103 8.1E-12 T 13-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 COP00_24520 d726ebf666a9efa48be62fddbea32f80 248 Pfam PF00574 Clp protease 48 185 2.6E-35 T 13-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA COP00_24520 d726ebf666a9efa48be62fddbea32f80 248 SUPERFAMILY SSF52096 16 187 1.9E-49 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily COP00_24520 d726ebf666a9efa48be62fddbea32f80 248 Gene3D G3DSA:3.90.226.10 8 201 3.3E-52 T 13-10-2018 COP00_24520 d726ebf666a9efa48be62fddbea32f80 248 PRINTS PR00127 Clp protease catalytic subunit P signature 55 75 8.1E-12 T 13-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 COP00_24520 d726ebf666a9efa48be62fddbea32f80 248 PRINTS PR00127 Clp protease catalytic subunit P signature 164 183 8.1E-12 T 13-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 COP00_24520 d726ebf666a9efa48be62fddbea32f80 248 PRINTS PR00127 Clp protease catalytic subunit P signature 86 103 8.1E-12 T 13-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 COP00_21055 30794de798c701af83599e9584e18bc0 204 Gene3D G3DSA:1.10.357.10 55 204 3.5E-38 T 13-10-2018 COP00_21055 30794de798c701af83599e9584e18bc0 204 SUPERFAMILY SSF48498 88 203 3.94E-14 T 13-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily COP00_21055 30794de798c701af83599e9584e18bc0 204 SUPERFAMILY SSF46689 4 77 1.08E-17 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 COP00_21055 30794de798c701af83599e9584e18bc0 204 Pfam PF00440 Bacterial regulatory proteins, tetR family 17 62 7.0E-16 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 COP00_21055 30794de798c701af83599e9584e18bc0 204 Gene3D G3DSA:1.10.10.60 1 54 4.6E-26 T 13-10-2018 COP00_21055 30794de798c701af83599e9584e18bc0 204 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 38 61 1.6E-7 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 COP00_21055 30794de798c701af83599e9584e18bc0 204 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 17 30 1.6E-7 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 COP00_16010 5e8f1d8dd39af06c404a00532b68185e 294 Pfam PF01680 SOR/SNZ family 7 212 2.5E-107 T 13-10-2018 IPR033755 PdxS/SNZ N-terminal domain KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 COP00_16010 5e8f1d8dd39af06c404a00532b68185e 294 PIRSF PIRSF029271 1 294 1.3E-154 T 13-10-2018 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 COP00_16010 5e8f1d8dd39af06c404a00532b68185e 294 Hamap MF_01824 Pyridoxal 5'-phosphate synthase subunit PdxS [pdxS]. 4 294 54.129 T 13-10-2018 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 COP00_16010 5e8f1d8dd39af06c404a00532b68185e 294 Gene3D G3DSA:3.20.20.70 1 294 9.1E-150 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 COP00_16010 5e8f1d8dd39af06c404a00532b68185e 294 ProSitePatterns PS01235 PdxS/SNZ family signature. 205 223 - T 13-10-2018 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 COP00_16010 5e8f1d8dd39af06c404a00532b68185e 294 SUPERFAMILY SSF51366 18 269 6.12E-71 T 13-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 COP00_16010 5e8f1d8dd39af06c404a00532b68185e 294 TIGRFAM TIGR00343 TIGR00343: pyridoxal 5'-phosphate synthase, synthase subunit Pdx1 9 294 1.4E-159 T 13-10-2018 IPR001852 Pyridoxal 5'-phosphate synthase subunit PdxS/SNZ GO:0042819|GO:0042823 KEGG: 00750+4.3.3.6|MetaCyc: PWY-6466 COP00_23060 855e492f85ad029f0b13185dd01c87d5 195 Pfam PF09335 SNARE associated Golgi protein 29 155 3.3E-24 T 13-10-2018 IPR032816 SNARE associated Golgi protein COP00_00985 80a3ab7d76efe8cd2062957008f6a83f 182 Pfam PF00156 Phosphoribosyl transferase domain 9 152 1.0E-20 T 13-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 COP00_00985 80a3ab7d76efe8cd2062957008f6a83f 182 SUPERFAMILY SSF53271 8 173 4.2E-42 T 13-10-2018 IPR029057 Phosphoribosyltransferase-like COP00_00985 80a3ab7d76efe8cd2062957008f6a83f 182 Hamap MF_01219 Bifunctional protein PyrR [pyrR]. 6 181 39.475 T 13-10-2018 IPR023050 Bifunctional protein PyrR KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 COP00_00985 80a3ab7d76efe8cd2062957008f6a83f 182 Gene3D G3DSA:3.40.50.2020 3 182 1.6E-59 T 13-10-2018 COP00_15930 4c59ab54a8cbd2f84f86256f2a600cdd 44 ProSitePatterns PS00784 Ribosomal protein L34 signature. 2 21 - T 13-10-2018 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 COP00_15930 4c59ab54a8cbd2f84f86256f2a600cdd 44 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 1 26 2.0E-7 T 13-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_15930 4c59ab54a8cbd2f84f86256f2a600cdd 44 Pfam PF00468 Ribosomal protein L34 1 44 1.6E-23 T 13-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_15930 4c59ab54a8cbd2f84f86256f2a600cdd 44 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 1 44 15.811 T 13-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_15930 4c59ab54a8cbd2f84f86256f2a600cdd 44 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 1 44 8.3E-21 T 13-10-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_17945 8a8d2baba1653fb84e9420b71ac2b5d6 331 Pfam PF00296 Luciferase-like monooxygenase 17 300 7.9E-34 T 13-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 COP00_17945 8a8d2baba1653fb84e9420b71ac2b5d6 331 SUPERFAMILY SSF51679 3 328 1.83E-73 T 13-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 COP00_17945 8a8d2baba1653fb84e9420b71ac2b5d6 331 Gene3D G3DSA:3.20.20.30 1 331 3.8E-98 T 13-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 COP00_17945 8a8d2baba1653fb84e9420b71ac2b5d6 331 TIGRFAM TIGR03558 oxido_grp_1: luciferase family oxidoreductase, group 1 4 328 1.1E-122 T 13-10-2018 IPR019949 Luciferase family oxidoreductase, group 1 COP00_10700 fa9057226b52a0d5d7dc444872231ad9 121 Gene3D G3DSA:2.60.300.12 5 113 2.6E-36 T 13-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 COP00_10700 fa9057226b52a0d5d7dc444872231ad9 121 Pfam PF01521 Iron-sulphur cluster biosynthesis 5 106 4.0E-22 T 13-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 COP00_10700 fa9057226b52a0d5d7dc444872231ad9 121 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 6 110 8.7E-39 T 13-10-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 COP00_10700 fa9057226b52a0d5d7dc444872231ad9 121 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 92 109 - T 13-10-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 COP00_10700 fa9057226b52a0d5d7dc444872231ad9 121 SUPERFAMILY SSF89360 4 97 4.71E-30 T 13-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 COP00_20805 c0dd1fddeb6d3c1fb8916843a73c8ce3 227 SUPERFAMILY SSF55469 9 225 6.67E-59 T 13-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 COP00_20805 c0dd1fddeb6d3c1fb8916843a73c8ce3 227 Gene3D G3DSA:3.40.109.10 5 227 3.1E-62 T 13-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 COP00_20805 c0dd1fddeb6d3c1fb8916843a73c8ce3 227 Pfam PF00881 Nitroreductase family 15 206 3.6E-28 T 13-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 COP00_08145 d1d133c2f374e531f4665a3c595dec51 269 SMART SM00062 46 269 6.1E-84 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF COP00_08145 d1d133c2f374e531f4665a3c595dec51 269 Gene3D G3DSA:3.40.190.10 47 265 2.2E-84 T 13-10-2018 COP00_08145 d1d133c2f374e531f4665a3c595dec51 269 SMART SM00079 46 268 1.1E-6 T 13-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 COP00_08145 d1d133c2f374e531f4665a3c595dec51 269 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 70 83 - T 13-10-2018 IPR018313 Solute-binding protein family 3, conserved site COP00_08145 d1d133c2f374e531f4665a3c595dec51 269 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 47 267 4.0E-61 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF COP00_08145 d1d133c2f374e531f4665a3c595dec51 269 Gene3D G3DSA:3.40.190.10 134 231 2.2E-84 T 13-10-2018 COP00_08145 d1d133c2f374e531f4665a3c595dec51 269 SUPERFAMILY SSF53850 7 267 2.21E-71 T 13-10-2018 COP00_13270 0451393f8d2e9e31f7bdc18745c625b4 295 SUPERFAMILY SSF53448 1 287 4.06E-86 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases COP00_13270 0451393f8d2e9e31f7bdc18745c625b4 295 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 2 286 6.7E-143 T 13-10-2018 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|KEGG: 00525+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 COP00_13270 0451393f8d2e9e31f7bdc18745c625b4 295 Gene3D G3DSA:3.90.550.10 1 292 1.6E-81 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases COP00_13270 0451393f8d2e9e31f7bdc18745c625b4 295 Pfam PF00483 Nucleotidyl transferase 2 238 8.9E-70 T 13-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 COP00_11260 a3fe545d98eaf0958dcd4161f01929c3 489 PRINTS PR00084 Mannitol dehydrogenase signature 204 217 2.8E-5 T 13-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 COP00_11260 a3fe545d98eaf0958dcd4161f01929c3 489 PRINTS PR00084 Mannitol dehydrogenase signature 234 249 2.8E-5 T 13-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 COP00_11260 a3fe545d98eaf0958dcd4161f01929c3 489 PRINTS PR00084 Mannitol dehydrogenase signature 18 28 2.8E-5 T 13-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 COP00_11260 a3fe545d98eaf0958dcd4161f01929c3 489 PRINTS PR00084 Mannitol dehydrogenase signature 163 176 2.8E-5 T 13-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 COP00_11260 a3fe545d98eaf0958dcd4161f01929c3 489 Gene3D G3DSA:3.40.50.720 4 268 2.0E-53 T 13-10-2018 COP00_11260 a3fe545d98eaf0958dcd4161f01929c3 489 SUPERFAMILY SSF48179 272 479 6.46E-47 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 COP00_11260 a3fe545d98eaf0958dcd4161f01929c3 489 SUPERFAMILY SSF51735 10 267 2.6E-70 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily COP00_11260 a3fe545d98eaf0958dcd4161f01929c3 489 Gene3D G3DSA:1.10.1040.10 271 479 6.5E-58 T 13-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 COP00_11260 a3fe545d98eaf0958dcd4161f01929c3 489 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 204 451 3.4E-55 T 13-10-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 COP00_11260 a3fe545d98eaf0958dcd4161f01929c3 489 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 17 171 1.2E-21 T 13-10-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 COP00_10450 7daae39b1d87c4f8400d7bed10c8a7b2 800 TIGRFAM TIGR00940 2a6301s01: monovalent cation:proton antiporter 4 796 0.0 T 13-10-2018 IPR005663 Monovalent cation proton antiporter subunit A GO:0015077|GO:0030004 COP00_10450 7daae39b1d87c4f8400d7bed10c8a7b2 800 Pfam PF13244 Domain of unknown function (DUF4040) 636 700 1.8E-21 T 13-10-2018 IPR025383 Domain of unknown function DUF4040 COP00_10450 7daae39b1d87c4f8400d7bed10c8a7b2 800 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 62 116 2.3E-11 T 13-10-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 COP00_10450 7daae39b1d87c4f8400d7bed10c8a7b2 800 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 472 493 1.5E-6 T 13-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 COP00_10450 7daae39b1d87c4f8400d7bed10c8a7b2 800 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 259 281 1.5E-6 T 13-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 COP00_10450 7daae39b1d87c4f8400d7bed10c8a7b2 800 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 79 99 1.5E-6 T 13-10-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 COP00_10450 7daae39b1d87c4f8400d7bed10c8a7b2 800 Pfam PF00361 Proton-conducting membrane transporter 130 423 6.6E-69 T 13-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 COP00_10450 7daae39b1d87c4f8400d7bed10c8a7b2 800 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 434 453 2.3E-43 T 13-10-2018 COP00_10450 7daae39b1d87c4f8400d7bed10c8a7b2 800 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 241 267 2.3E-43 T 13-10-2018 COP00_10450 7daae39b1d87c4f8400d7bed10c8a7b2 800 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 153 174 2.3E-43 T 13-10-2018 COP00_10450 7daae39b1d87c4f8400d7bed10c8a7b2 800 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 106 126 2.3E-43 T 13-10-2018 COP00_10450 7daae39b1d87c4f8400d7bed10c8a7b2 800 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 77 102 2.3E-43 T 13-10-2018 COP00_10450 7daae39b1d87c4f8400d7bed10c8a7b2 800 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 219 240 2.3E-43 T 13-10-2018 COP00_10450 7daae39b1d87c4f8400d7bed10c8a7b2 800 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 309 321 2.3E-43 T 13-10-2018 COP00_05240 381ac29e0c6cd4d7ccb77cb46ccdc3b6 558 Pfam PF00920 Dehydratase family 34 553 2.8E-229 T 13-10-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 COP00_05240 381ac29e0c6cd4d7ccb77cb46ccdc3b6 558 SUPERFAMILY SSF143975 3 376 1.7E-141 T 13-10-2018 IPR037237 IlvD/EDD, N-terminal domain KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 COP00_05240 381ac29e0c6cd4d7ccb77cb46ccdc3b6 558 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 122 132 - T 13-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 COP00_05240 381ac29e0c6cd4d7ccb77cb46ccdc3b6 558 SUPERFAMILY SSF52016 377 556 1.49E-62 T 13-10-2018 COP00_05240 381ac29e0c6cd4d7ccb77cb46ccdc3b6 558 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 17 557 5.1E-268 T 13-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 COP00_05240 381ac29e0c6cd4d7ccb77cb46ccdc3b6 558 Gene3D G3DSA:3.50.30.80 377 528 1.4E-55 T 13-10-2018 COP00_05240 381ac29e0c6cd4d7ccb77cb46ccdc3b6 558 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 465 476 - T 13-10-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 COP00_05240 381ac29e0c6cd4d7ccb77cb46ccdc3b6 558 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 4 557 47.94 T 13-10-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 COP00_06715 c71fa3f05269ddbf8270e17394962d69 110 SUPERFAMILY SSF52821 8 104 3.4E-34 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily COP00_06715 c71fa3f05269ddbf8270e17394962d69 110 Pfam PF00581 Rhodanese-like domain 25 104 9.2E-21 T 13-10-2018 IPR001763 Rhodanese-like domain COP00_06715 c71fa3f05269ddbf8270e17394962d69 110 Gene3D G3DSA:3.40.250.10 14 110 2.9E-31 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily COP00_06715 c71fa3f05269ddbf8270e17394962d69 110 SMART SM00450 13 108 1.3E-32 T 13-10-2018 IPR001763 Rhodanese-like domain COP00_18550 484c7b6d93a0f729c10f00f3355c1d2f 242 SUPERFAMILY SSF89082 160 241 5.23E-6 T 13-10-2018 IPR036244 TipA-like multidrug resistance regulator, antibiotic-recognition domain COP00_18550 484c7b6d93a0f729c10f00f3355c1d2f 242 SUPERFAMILY SSF46955 3 114 7.33E-26 T 13-10-2018 IPR009061 Putative DNA-binding domain superfamily COP00_18550 484c7b6d93a0f729c10f00f3355c1d2f 242 SMART SM00422 3 72 7.1E-24 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 COP00_18550 484c7b6d93a0f729c10f00f3355c1d2f 242 Gene3D G3DSA:1.10.1660.10 2 144 5.1E-36 T 13-10-2018 COP00_18550 484c7b6d93a0f729c10f00f3355c1d2f 242 Pfam PF13411 MerR HTH family regulatory protein 3 70 2.6E-14 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 COP00_18550 484c7b6d93a0f729c10f00f3355c1d2f 242 Pfam PF07739 TipAS antibiotic-recognition domain 144 240 1.5E-9 T 13-10-2018 IPR012925 TipAS antibiotic-recognition domain COP00_09790 c63481412f508592c2dd4a74d0139b8c 145 PIRSF PIRSF005900 1 145 1.9E-47 T 13-10-2018 IPR002177 DNA-binding protein Dps COP00_09790 c63481412f508592c2dd4a74d0139b8c 145 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 51 67 5.4E-14 T 13-10-2018 IPR002177 DNA-binding protein Dps COP00_09790 c63481412f508592c2dd4a74d0139b8c 145 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 122 140 5.4E-14 T 13-10-2018 IPR002177 DNA-binding protein Dps COP00_09790 c63481412f508592c2dd4a74d0139b8c 145 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 27 43 5.4E-14 T 13-10-2018 IPR002177 DNA-binding protein Dps COP00_09790 c63481412f508592c2dd4a74d0139b8c 145 Gene3D G3DSA:1.20.1260.10 2 145 9.6E-54 T 13-10-2018 IPR012347 Ferritin-like COP00_09790 c63481412f508592c2dd4a74d0139b8c 145 SUPERFAMILY SSF47240 3 145 1.98E-46 T 13-10-2018 IPR009078 Ferritin-like superfamily COP00_09790 c63481412f508592c2dd4a74d0139b8c 145 Pfam PF00210 Ferritin-like domain 10 145 7.6E-32 T 13-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 COP00_09790 c63481412f508592c2dd4a74d0139b8c 145 ProSitePatterns PS00818 Dps protein family signature 1. 27 43 - T 13-10-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 COP00_08130 aff432a123a36b8c2f03fba2d48a8d14 878 Gene3D G3DSA:3.30.54.20 626 679 6.0E-52 T 13-10-2018 COP00_08130 aff432a123a36b8c2f03fba2d48a8d14 878 Gene3D G3DSA:3.30.980.10 564 699 6.0E-52 T 13-10-2018 COP00_08130 aff432a123a36b8c2f03fba2d48a8d14 878 SMART SM00863 655 698 2.6E-22 T 13-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 COP00_08130 aff432a123a36b8c2f03fba2d48a8d14 878 Gene3D G3DSA:3.10.310.40 765 876 1.1E-36 T 13-10-2018 COP00_08130 aff432a123a36b8c2f03fba2d48a8d14 878 Pfam PF02272 DHHA1 domain 735 874 4.2E-30 T 13-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 COP00_08130 aff432a123a36b8c2f03fba2d48a8d14 878 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 8 857 0.0 T 13-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 COP00_08130 aff432a123a36b8c2f03fba2d48a8d14 878 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 655 698 3.5E-19 T 13-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 COP00_08130 aff432a123a36b8c2f03fba2d48a8d14 878 SUPERFAMILY SSF101353 246 461 6.93E-69 T 13-10-2018 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain superfamily GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 COP00_08130 aff432a123a36b8c2f03fba2d48a8d14 878 PRINTS PR00980 Alanyl-tRNA synthetase signature 73 84 8.6E-32 T 13-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 COP00_08130 aff432a123a36b8c2f03fba2d48a8d14 878 PRINTS PR00980 Alanyl-tRNA synthetase signature 199 210 8.6E-32 T 13-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 COP00_08130 aff432a123a36b8c2f03fba2d48a8d14 878 PRINTS PR00980 Alanyl-tRNA synthetase signature 276 292 8.6E-32 T 13-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 COP00_08130 aff432a123a36b8c2f03fba2d48a8d14 878 PRINTS PR00980 Alanyl-tRNA synthetase signature 226 239 8.6E-32 T 13-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 COP00_08130 aff432a123a36b8c2f03fba2d48a8d14 878 PRINTS PR00980 Alanyl-tRNA synthetase signature 300 313 8.6E-32 T 13-10-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 COP00_08130 aff432a123a36b8c2f03fba2d48a8d14 878 Gene3D G3DSA:3.30.930.10 3 242 1.1E-96 T 13-10-2018 COP00_08130 aff432a123a36b8c2f03fba2d48a8d14 878 SUPERFAMILY SSF55186 557 713 1.05E-52 T 13-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 COP00_08130 aff432a123a36b8c2f03fba2d48a8d14 878 SUPERFAMILY SSF55681 5 245 1.19E-89 T 13-10-2018 COP00_08130 aff432a123a36b8c2f03fba2d48a8d14 878 SUPERFAMILY SSF50447 454 554 1.17E-16 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily COP00_08130 aff432a123a36b8c2f03fba2d48a8d14 878 Pfam PF01411 tRNA synthetases class II (A) 8 556 4.6E-216 T 13-10-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 COP00_08130 aff432a123a36b8c2f03fba2d48a8d14 878 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 878 184.768 T 13-10-2018 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 COP00_08130 aff432a123a36b8c2f03fba2d48a8d14 878 Gene3D G3DSA:2.40.30.130 464 554 5.8E-10 T 13-10-2018 COP00_11305 468d14eadf55b7548ce2e29fe28337ab 468 Pfam PF13520 Amino acid permease 8 460 3.8E-55 T 13-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 COP00_11305 468d14eadf55b7548ce2e29fe28337ab 468 PIRSF PIRSF006060 1 468 4.7E-58 T 13-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 COP00_11305 468d14eadf55b7548ce2e29fe28337ab 468 Gene3D G3DSA:1.20.1740.10 2 468 1.4E-67 T 13-10-2018 COP00_04890 d14114c98604a173be38e44372017921 280 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 235 242 - T 13-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 COP00_04890 d14114c98604a173be38e44372017921 280 SUPERFAMILY SSF46609 76 163 5.37E-30 T 13-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 COP00_04890 d14114c98604a173be38e44372017921 280 Gene3D G3DSA:1.10.287.990 96 158 1.2E-23 T 13-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 COP00_04890 d14114c98604a173be38e44372017921 280 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 166 267 3.8E-35 T 13-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 COP00_04890 d14114c98604a173be38e44372017921 280 PRINTS PR01703 Manganese superoxide dismutase signature 103 116 1.4E-20 T 13-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 COP00_04890 d14114c98604a173be38e44372017921 280 PRINTS PR01703 Manganese superoxide dismutase signature 233 245 1.4E-20 T 13-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 COP00_04890 d14114c98604a173be38e44372017921 280 PRINTS PR01703 Manganese superoxide dismutase signature 142 155 1.4E-20 T 13-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 COP00_04890 d14114c98604a173be38e44372017921 280 PRINTS PR01703 Manganese superoxide dismutase signature 195 203 1.4E-20 T 13-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 COP00_04890 d14114c98604a173be38e44372017921 280 PRINTS PR01703 Manganese superoxide dismutase signature 82 93 1.4E-20 T 13-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 COP00_04890 d14114c98604a173be38e44372017921 280 SUPERFAMILY SSF54719 159 272 5.63E-41 T 13-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 COP00_04890 d14114c98604a173be38e44372017921 280 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 79 158 6.1E-27 T 13-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 COP00_04890 d14114c98604a173be38e44372017921 280 Gene3D G3DSA:2.40.500.20 159 278 1.4E-43 T 13-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 COP00_07925 6450873095d1d4fc304b3e1f6a34b2f6 284 Gene3D G3DSA:3.30.450.180 111 282 3.7E-20 T 13-10-2018 COP00_07925 6450873095d1d4fc304b3e1f6a34b2f6 284 SUPERFAMILY SSF47413 26 85 2.48E-7 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 COP00_07925 6450873095d1d4fc304b3e1f6a34b2f6 284 Gene3D G3DSA:1.10.260.40 16 88 2.3E-7 T 13-10-2018 COP00_07925 6450873095d1d4fc304b3e1f6a34b2f6 284 Pfam PF13560 Helix-turn-helix domain 34 84 2.5E-12 T 13-10-2018 COP00_07925 6450873095d1d4fc304b3e1f6a34b2f6 284 SMART SM00530 14 86 8.9E-4 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 COP00_22700 f56c428b1356294173032fa648b7ee3e 270 Gene3D G3DSA:3.40.50.1000 8 263 1.3E-62 T 13-10-2018 IPR023214 HAD superfamily COP00_22700 f56c428b1356294173032fa648b7ee3e 270 SUPERFAMILY SSF56784 4 268 1.71E-68 T 13-10-2018 IPR036412 HAD-like superfamily COP00_22700 f56c428b1356294173032fa648b7ee3e 270 Pfam PF08282 haloacid dehalogenase-like hydrolase 8 264 3.0E-65 T 13-10-2018 COP00_22700 f56c428b1356294173032fa648b7ee3e 270 Gene3D G3DSA:3.30.1240.10 87 193 1.3E-62 T 13-10-2018 COP00_22700 f56c428b1356294173032fa648b7ee3e 270 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 7 264 1.4E-59 T 13-10-2018 IPR000150 Cof family GO:0016787 COP00_22700 f56c428b1356294173032fa648b7ee3e 270 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 7 237 1.7E-25 T 13-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 COP00_00435 0b5ac45432cf3e764ef5da7c918346fd 229 SUPERFAMILY SSF52540 1 222 4.17E-74 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_00435 0b5ac45432cf3e764ef5da7c918346fd 229 SMART SM00382 30 217 1.2E-14 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_00435 0b5ac45432cf3e764ef5da7c918346fd 229 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 COP00_00435 0b5ac45432cf3e764ef5da7c918346fd 229 Pfam PF00005 ABC transporter 21 169 3.0E-34 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 COP00_00435 0b5ac45432cf3e764ef5da7c918346fd 229 Gene3D G3DSA:3.40.50.300 1 227 3.5E-67 T 13-10-2018 COP00_01745 532cffdecccfe42ebf10f68dc5e7f419 86 Gene3D G3DSA:3.30.110.20 1 86 4.6E-37 T 13-10-2018 IPR036882 Alba-like domain superfamily GO:0003676 COP00_01745 532cffdecccfe42ebf10f68dc5e7f419 86 ProDom PD061837 SPORULATION V STAGE S SPOVS-RELATED SPOVS CELL SEPTATION SPOVS3 RELATED 3 86 5.0E-33 T 13-10-2018 IPR007347 Sporulation stage V, protein S COP00_01745 532cffdecccfe42ebf10f68dc5e7f419 86 Pfam PF04232 Stage V sporulation protein S (SpoVS) 2 84 9.9E-41 T 13-10-2018 IPR007347 Sporulation stage V, protein S COP00_22160 9a1bba18720353e58107dc7fcb1ab808 357 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 2 357 48.553 T 13-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 COP00_22160 9a1bba18720353e58107dc7fcb1ab808 357 SUPERFAMILY SSF53383 4 355 1.21E-112 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase COP00_22160 9a1bba18720353e58107dc7fcb1ab808 357 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 184 203 - T 13-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site COP00_22160 9a1bba18720353e58107dc7fcb1ab808 357 Gene3D G3DSA:3.90.1150.10 255 357 2.9E-40 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 COP00_22160 9a1bba18720353e58107dc7fcb1ab808 357 Pfam PF00266 Aminotransferase class-V 6 346 1.1E-49 T 13-10-2018 IPR000192 Aminotransferase class V domain COP00_22160 9a1bba18720353e58107dc7fcb1ab808 357 Gene3D G3DSA:3.40.640.10 17 253 2.7E-86 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 COP00_22160 9a1bba18720353e58107dc7fcb1ab808 357 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 5 357 1.2E-155 T 13-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 COP00_22160 9a1bba18720353e58107dc7fcb1ab808 357 PIRSF PIRSF000525 1 357 2.4E-153 T 13-10-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 COP00_04175 4be859626ed783b922efe8cdf113b6b2 392 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 5.3E-10 T 13-10-2018 COP00_04175 4be859626ed783b922efe8cdf113b6b2 392 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 156 174 5.3E-10 T 13-10-2018 COP00_04175 4be859626ed783b922efe8cdf113b6b2 392 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 275 297 5.3E-10 T 13-10-2018 COP00_04175 4be859626ed783b922efe8cdf113b6b2 392 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 100 118 5.3E-10 T 13-10-2018 COP00_04175 4be859626ed783b922efe8cdf113b6b2 392 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 4 26 2.9E-6 T 13-10-2018 COP00_04175 4be859626ed783b922efe8cdf113b6b2 392 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 156 181 2.9E-6 T 13-10-2018 COP00_04175 4be859626ed783b922efe8cdf113b6b2 392 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 290 297 2.9E-6 T 13-10-2018 COP00_04175 4be859626ed783b922efe8cdf113b6b2 392 Gene3D G3DSA:3.50.50.100 1 391 2.2E-114 T 13-10-2018 COP00_04175 4be859626ed783b922efe8cdf113b6b2 392 SUPERFAMILY SSF51905 1 330 8.26E-29 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily COP00_04175 4be859626ed783b922efe8cdf113b6b2 392 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 4 318 2.2E-42 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 COP00_12330 1e6b2fbec065840b067edcaef9bbcbbd 852 SMART SM00710 362 383 6700.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat COP00_12330 1e6b2fbec065840b067edcaef9bbcbbd 852 SMART SM00710 512 535 10000.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat COP00_12330 1e6b2fbec065840b067edcaef9bbcbbd 852 SMART SM00710 488 510 2300.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat COP00_12330 1e6b2fbec065840b067edcaef9bbcbbd 852 SMART SM00710 300 332 59.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat COP00_12330 1e6b2fbec065840b067edcaef9bbcbbd 852 SMART SM00710 334 355 4300.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat COP00_12330 1e6b2fbec065840b067edcaef9bbcbbd 852 SMART SM00710 277 299 2700.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat COP00_12330 1e6b2fbec065840b067edcaef9bbcbbd 852 Pfam PF12708 Pectate lyase superfamily protein 122 345 1.0E-15 T 13-10-2018 IPR024535 Pectate lyase superfamily protein COP00_12330 1e6b2fbec065840b067edcaef9bbcbbd 852 Gene3D G3DSA:2.160.20.10 114 567 1.0E-118 T 13-10-2018 IPR012334 Pectin lyase fold COP00_12330 1e6b2fbec065840b067edcaef9bbcbbd 852 SUPERFAMILY SSF51126 119 407 1.26E-33 T 13-10-2018 IPR011050 Pectin lyase fold/virulence factor COP00_12330 1e6b2fbec065840b067edcaef9bbcbbd 852 Gene3D G3DSA:4.10.80.40 741 779 2.4E-65 T 13-10-2018 COP00_12330 1e6b2fbec065840b067edcaef9bbcbbd 852 Pfam PF11962 Peptidase_G2, IMC autoproteolytic cleavage domain 635 852 1.3E-73 T 13-10-2018 IPR021865 Peptidase G2, IMC autoproteolytic cleavage domain COP00_12330 1e6b2fbec065840b067edcaef9bbcbbd 852 Gene3D G3DSA:2.40.300.10 688 850 2.4E-65 T 13-10-2018 COP00_04120 c86380bca4a6b03d185b1a47ad833e83 241 SUPERFAMILY SSF56219 2 240 1.83E-41 T 13-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily COP00_04120 c86380bca4a6b03d185b1a47ad833e83 241 Gene3D G3DSA:3.60.10.10 2 241 5.7E-65 T 13-10-2018 IPR036691 Endonuclease/exonuclease/phosphatase superfamily COP00_04120 c86380bca4a6b03d185b1a47ad833e83 241 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 6 232 1.0E-20 T 13-10-2018 IPR005135 Endonuclease/exonuclease/phosphatase COP00_06585 419f3666987d56618b655c0c7beb2fb2 296 Gene3D G3DSA:1.10.600.10 2 296 1.7E-107 T 13-10-2018 IPR008949 Isoprenoid synthase domain superfamily COP00_06585 419f3666987d56618b655c0c7beb2fb2 296 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 82 98 - T 13-10-2018 IPR033749 Polyprenyl synthetase, conserved site COP00_06585 419f3666987d56618b655c0c7beb2fb2 296 SUPERFAMILY SSF48576 9 276 1.98E-85 T 13-10-2018 IPR008949 Isoprenoid synthase domain superfamily COP00_06585 419f3666987d56618b655c0c7beb2fb2 296 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 215 227 - T 13-10-2018 IPR033749 Polyprenyl synthetase, conserved site COP00_06585 419f3666987d56618b655c0c7beb2fb2 296 Pfam PF00348 Polyprenyl synthetase 32 271 2.5E-60 T 13-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 COP00_20060 45bfe0d65e6e5b30fd43c54a423ceea1 761 Gene3D G3DSA:2.60.420.10 682 751 5.9E-22 T 13-10-2018 COP00_20060 45bfe0d65e6e5b30fd43c54a423ceea1 761 Pfam PF03636 Glycosyl hydrolase family 65, N-terminal domain 18 267 2.6E-59 T 13-10-2018 IPR005196 Glycoside hydrolase, family 65, N-terminal GO:0003824|GO:0005975 COP00_20060 45bfe0d65e6e5b30fd43c54a423ceea1 761 Gene3D G3DSA:1.50.10.10 318 681 2.5E-141 T 13-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 COP00_20060 45bfe0d65e6e5b30fd43c54a423ceea1 761 PIRSF PIRSF036289 1 759 6.2E-279 T 13-10-2018 IPR017045 Maltose phosphorylase/glycosyl hydrolase/vacuolar acid trehalase COP00_20060 45bfe0d65e6e5b30fd43c54a423ceea1 761 SUPERFAMILY SSF48208 273 746 2.27E-141 T 13-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 COP00_20060 45bfe0d65e6e5b30fd43c54a423ceea1 761 Pfam PF03632 Glycosyl hydrolase family 65 central catalytic domain 323 696 2.7E-159 T 13-10-2018 IPR005195 Glycoside hydrolase, family 65, central catalytic GO:0003824|GO:0005975 COP00_20060 45bfe0d65e6e5b30fd43c54a423ceea1 761 Pfam PF03633 Glycosyl hydrolase family 65, C-terminal domain 700 748 1.1E-15 T 13-10-2018 IPR005194 Glycoside hydrolase family 65, C-terminal COP00_20060 45bfe0d65e6e5b30fd43c54a423ceea1 761 Gene3D G3DSA:2.70.98.40 3 270 7.1E-86 T 13-10-2018 IPR037018 Glycoside hydrolase family 65, N-terminal domain superfamily COP00_20060 45bfe0d65e6e5b30fd43c54a423ceea1 761 SUPERFAMILY SSF74650 4 269 5.96E-86 T 13-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 COP00_04205 d6fdb2444eb8f047568970766310148a 508 SUPERFAMILY SSF52096 235 507 4.41E-81 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily COP00_04205 d6fdb2444eb8f047568970766310148a 508 SUPERFAMILY SSF52096 4 248 8.11E-64 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily COP00_04205 d6fdb2444eb8f047568970766310148a 508 Gene3D G3DSA:3.90.226.10 1 244 2.0E-74 T 13-10-2018 COP00_04205 d6fdb2444eb8f047568970766310148a 508 Gene3D G3DSA:3.90.226.10 245 507 4.1E-82 T 13-10-2018 COP00_04205 d6fdb2444eb8f047568970766310148a 508 Pfam PF01039 Carboxyl transferase domain 26 505 2.2E-162 T 13-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 COP00_09625 69a28a7b6d61817c57dc9370c724706f 804 Gene3D G3DSA:3.10.20.590 744 803 8.6E-23 T 13-10-2018 COP00_09625 69a28a7b6d61817c57dc9370c724706f 804 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 219 399 1.6E-67 T 13-10-2018 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 COP00_09625 69a28a7b6d61817c57dc9370c724706f 804 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 4 803 0.0 T 13-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 COP00_09625 69a28a7b6d61817c57dc9370c724706f 804 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 52 - T 13-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 COP00_09625 69a28a7b6d61817c57dc9370c724706f 804 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 412 603 5.5E-21 T 13-10-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 COP00_09625 69a28a7b6d61817c57dc9370c724706f 804 SUPERFAMILY SSF52374 4 625 8.55E-145 T 13-10-2018 COP00_09625 69a28a7b6d61817c57dc9370c724706f 804 Pfam PF09334 tRNA synthetases class I (M) 39 170 8.8E-17 T 13-10-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 COP00_09625 69a28a7b6d61817c57dc9370c724706f 804 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 2 803 23.291 T 13-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 COP00_09625 69a28a7b6d61817c57dc9370c724706f 804 Gene3D G3DSA:2.30.210.10 572 588 2.4E-278 T 13-10-2018 COP00_09625 69a28a7b6d61817c57dc9370c724706f 804 Gene3D G3DSA:3.90.740.10 226 410 2.4E-278 T 13-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 COP00_09625 69a28a7b6d61817c57dc9370c724706f 804 SUPERFAMILY SSF50677 224 410 1.26E-55 T 13-10-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 COP00_09625 69a28a7b6d61817c57dc9370c724706f 804 Gene3D G3DSA:1.10.730.10 599 741 4.8E-46 T 13-10-2018 COP00_09625 69a28a7b6d61817c57dc9370c724706f 804 Pfam PF08264 Anticodon-binding domain of tRNA 655 766 7.4E-20 T 13-10-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0004812|GO:0006418 COP00_09625 69a28a7b6d61817c57dc9370c724706f 804 SUPERFAMILY SSF47323 619 803 1.22E-40 T 13-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 COP00_09625 69a28a7b6d61817c57dc9370c724706f 804 PRINTS PR00985 Leucyl-tRNA synthetase signature 524 546 7.4E-58 T 13-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 COP00_09625 69a28a7b6d61817c57dc9370c724706f 804 PRINTS PR00985 Leucyl-tRNA synthetase signature 184 197 7.4E-58 T 13-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 COP00_09625 69a28a7b6d61817c57dc9370c724706f 804 PRINTS PR00985 Leucyl-tRNA synthetase signature 485 503 7.4E-58 T 13-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 COP00_09625 69a28a7b6d61817c57dc9370c724706f 804 PRINTS PR00985 Leucyl-tRNA synthetase signature 126 143 7.4E-58 T 13-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 COP00_09625 69a28a7b6d61817c57dc9370c724706f 804 PRINTS PR00985 Leucyl-tRNA synthetase signature 213 232 7.4E-58 T 13-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 COP00_09625 69a28a7b6d61817c57dc9370c724706f 804 PRINTS PR00985 Leucyl-tRNA synthetase signature 152 168 7.4E-58 T 13-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 COP00_09625 69a28a7b6d61817c57dc9370c724706f 804 PRINTS PR00985 Leucyl-tRNA synthetase signature 557 567 7.4E-58 T 13-10-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 COP00_09625 69a28a7b6d61817c57dc9370c724706f 804 Gene3D G3DSA:3.40.50.620 32 571 2.4E-278 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold COP00_21595 0e97e6a004a56af131aeae5ef2591d38 1192 Pfam PF02872 5'-nucleotidase, C-terminal domain 885 1028 7.1E-32 T 13-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 COP00_21595 0e97e6a004a56af131aeae5ef2591d38 1192 SUPERFAMILY SSF50199 357 503 1.83E-28 T 13-10-2018 COP00_21595 0e97e6a004a56af131aeae5ef2591d38 1192 Gene3D G3DSA:3.60.21.10 568 882 8.5E-81 T 13-10-2018 IPR029052 Metallo-dependent phosphatase-like COP00_21595 0e97e6a004a56af131aeae5ef2591d38 1192 PRINTS PR01607 Apyrase family signature 1004 1023 8.5E-25 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 COP00_21595 0e97e6a004a56af131aeae5ef2591d38 1192 PRINTS PR01607 Apyrase family signature 819 839 8.5E-25 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 COP00_21595 0e97e6a004a56af131aeae5ef2591d38 1192 PRINTS PR01607 Apyrase family signature 569 587 8.5E-25 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 COP00_21595 0e97e6a004a56af131aeae5ef2591d38 1192 PRINTS PR01607 Apyrase family signature 936 959 8.5E-25 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 COP00_21595 0e97e6a004a56af131aeae5ef2591d38 1192 PRINTS PR01607 Apyrase family signature 793 816 8.5E-25 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 COP00_21595 0e97e6a004a56af131aeae5ef2591d38 1192 Pfam PF00149 Calcineurin-like phosphoesterase 572 810 8.0E-11 T 13-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 COP00_21595 0e97e6a004a56af131aeae5ef2591d38 1192 Pfam PF00565 Staphylococcal nuclease homologue 385 499 1.9E-24 T 13-10-2018 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold Reactome: R-HSA-6802952 COP00_21595 0e97e6a004a56af131aeae5ef2591d38 1192 Gene3D G3DSA:2.40.50.90 357 503 6.1E-32 T 13-10-2018 IPR035437 SNase-like, OB-fold superfamily COP00_21595 0e97e6a004a56af131aeae5ef2591d38 1192 SUPERFAMILY SSF55816 882 1069 4.71E-42 T 13-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 COP00_21595 0e97e6a004a56af131aeae5ef2591d38 1192 Gene3D G3DSA:3.90.780.10 885 1070 1.2E-40 T 13-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 COP00_21595 0e97e6a004a56af131aeae5ef2591d38 1192 SUPERFAMILY SSF56300 567 881 1.81E-71 T 13-10-2018 COP00_21595 0e97e6a004a56af131aeae5ef2591d38 1192 SMART SM00318 359 500 7.9E-35 T 13-10-2018 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold Reactome: R-HSA-6802952 COP00_21595 0e97e6a004a56af131aeae5ef2591d38 1192 ProSitePatterns PS00786 5'-nucleotidase signature 2. 654 665 - T 13-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 COP00_05560 a675b068c496d15260af02971201339c 112 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 26 105 2.0E-20 T 13-10-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core COP00_05560 a675b068c496d15260af02971201339c 112 SUPERFAMILY SSF101386 5 105 4.25E-28 T 13-10-2018 COP00_05560 a675b068c496d15260af02971201339c 112 Gene3D G3DSA:1.10.287.1080 2 112 7.1E-36 T 13-10-2018 COP00_05560 a675b068c496d15260af02971201339c 112 PIRSF PIRSF029904 2 112 2.5E-53 T 13-10-2018 IPR012359 NTP pyrophosphohydrolase MazG-related, YpjD COP00_17240 5c7c7e370e6b7ba120727f1a8b2e56db 124 Gene3D G3DSA:1.10.260.40 3 124 1.3E-22 T 13-10-2018 COP00_17240 5c7c7e370e6b7ba120727f1a8b2e56db 124 SMART SM00530 6 61 2.7E-16 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 COP00_17240 5c7c7e370e6b7ba120727f1a8b2e56db 124 SUPERFAMILY SSF47413 1 66 1.45E-18 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 COP00_17240 5c7c7e370e6b7ba120727f1a8b2e56db 124 Pfam PF01381 Helix-turn-helix 7 61 3.9E-17 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 COP00_10685 075a85d88d34640c0e386063de77f542 95 Gene3D G3DSA:3.10.450.130 13 94 9.6E-13 T 13-10-2018 COP00_10685 075a85d88d34640c0e386063de77f542 95 Pfam PF07252 Protein of unknown function (DUF1433) 17 68 3.3E-11 T 13-10-2018 IPR009881 Protein of unknown function DUF1433 COP00_06395 c66eb1f3bf2d1342bc32d2971d519712 471 Gene3D G3DSA:3.20.20.80 13 468 6.1E-161 T 13-10-2018 COP00_06395 c66eb1f3bf2d1342bc32d2971d519712 471 SUPERFAMILY SSF51445 10 465 2.82E-170 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily COP00_06395 c66eb1f3bf2d1342bc32d2971d519712 471 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 370 378 - T 13-10-2018 IPR018120 Glycoside hydrolase family 1, active site COP00_06395 c66eb1f3bf2d1342bc32d2971d519712 471 PRINTS PR00131 Glycosyl hydrolase family 1 signature 439 451 1.7E-16 T 13-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 COP00_06395 c66eb1f3bf2d1342bc32d2971d519712 471 PRINTS PR00131 Glycosyl hydrolase family 1 signature 370 378 1.7E-16 T 13-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 COP00_06395 c66eb1f3bf2d1342bc32d2971d519712 471 PRINTS PR00131 Glycosyl hydrolase family 1 signature 415 432 1.7E-16 T 13-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 COP00_06395 c66eb1f3bf2d1342bc32d2971d519712 471 PRINTS PR00131 Glycosyl hydrolase family 1 signature 394 405 1.7E-16 T 13-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 COP00_06395 c66eb1f3bf2d1342bc32d2971d519712 471 PRINTS PR00131 Glycosyl hydrolase family 1 signature 298 312 1.7E-16 T 13-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 COP00_06395 c66eb1f3bf2d1342bc32d2971d519712 471 Pfam PF00232 Glycosyl hydrolase family 1 13 468 1.3E-145 T 13-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 COP00_01695 476a858ab6016ba30c469de9080d9718 428 SUPERFAMILY SSF63411 286 426 1.69E-16 T 13-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 COP00_01695 476a858ab6016ba30c469de9080d9718 428 Pfam PF00675 Insulinase (Peptidase family M16) 65 176 3.5E-18 T 13-10-2018 IPR011765 Peptidase M16, N-terminal COP00_01695 476a858ab6016ba30c469de9080d9718 428 Gene3D G3DSA:3.30.830.10 239 426 1.4E-40 T 13-10-2018 COP00_01695 476a858ab6016ba30c469de9080d9718 428 Gene3D G3DSA:3.30.830.10 9 237 1.0E-57 T 13-10-2018 COP00_01695 476a858ab6016ba30c469de9080d9718 428 Pfam PF05193 Peptidase M16 inactive domain 183 361 1.6E-16 T 13-10-2018 IPR007863 Peptidase M16, C-terminal COP00_01695 476a858ab6016ba30c469de9080d9718 428 SUPERFAMILY SSF63411 15 221 1.31E-41 T 13-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 COP00_13225 d55b12c0e86f79782891131fd86ea2aa 380 Gene3D G3DSA:3.40.50.2000 6 361 3.2E-156 T 13-10-2018 COP00_13225 d55b12c0e86f79782891131fd86ea2aa 380 Gene3D G3DSA:3.40.50.2000 191 351 3.2E-156 T 13-10-2018 COP00_13225 d55b12c0e86f79782891131fd86ea2aa 380 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 25 363 1.3E-121 T 13-10-2018 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 COP00_13225 d55b12c0e86f79782891131fd86ea2aa 380 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 4 365 9.1E-175 T 13-10-2018 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 COP00_13225 d55b12c0e86f79782891131fd86ea2aa 380 SUPERFAMILY SSF53756 3 369 9.42E-140 T 13-10-2018 COP00_19100 7e9ff0dc139fcaa660f28ac5721a072a 720 Pfam PF00575 S1 RNA binding domain 645 716 1.3E-16 T 13-10-2018 IPR003029 S1 domain GO:0003676 COP00_19100 7e9ff0dc139fcaa660f28ac5721a072a 720 Gene3D G3DSA:3.30.420.140 319 445 2.9E-157 T 13-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 COP00_19100 7e9ff0dc139fcaa660f28ac5721a072a 720 Gene3D G3DSA:1.10.10.650 3 111 2.3E-37 T 13-10-2018 IPR023319 Tex-like protein, HTH domain superfamily COP00_19100 7e9ff0dc139fcaa660f28ac5721a072a 720 SMART SM00316 646 717 4.5E-22 T 13-10-2018 IPR022967 RNA-binding domain, S1 COP00_19100 7e9ff0dc139fcaa660f28ac5721a072a 720 SUPERFAMILY SSF47781 554 629 3.78E-15 T 13-10-2018 IPR010994 RuvA domain 2-like COP00_19100 7e9ff0dc139fcaa660f28ac5721a072a 720 SUPERFAMILY SSF158832 7 315 4.84E-111 T 13-10-2018 COP00_19100 7e9ff0dc139fcaa660f28ac5721a072a 720 SMART SM00732 320 418 1.4E-36 T 13-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 COP00_19100 7e9ff0dc139fcaa660f28ac5721a072a 720 Pfam PF09371 Tex-like protein N-terminal domain 11 196 2.5E-68 T 13-10-2018 IPR018974 Tex-like protein, N-terminal COP00_19100 7e9ff0dc139fcaa660f28ac5721a072a 720 Gene3D G3DSA:1.10.150.310 493 627 6.8E-46 T 13-10-2018 COP00_19100 7e9ff0dc139fcaa660f28ac5721a072a 720 SUPERFAMILY SSF50249 632 717 3.43E-23 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold COP00_19100 7e9ff0dc139fcaa660f28ac5721a072a 720 SUPERFAMILY SSF47781 464 552 2.89E-26 T 13-10-2018 IPR010994 RuvA domain 2-like COP00_19100 7e9ff0dc139fcaa660f28ac5721a072a 720 Pfam PF16921 Tex protein YqgF-like domain 320 445 4.5E-57 T 13-10-2018 IPR032639 Tex protein, YqgF-like domain COP00_19100 7e9ff0dc139fcaa660f28ac5721a072a 720 SUPERFAMILY SSF53098 316 463 2.5E-50 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily COP00_19100 7e9ff0dc139fcaa660f28ac5721a072a 720 Gene3D G3DSA:1.10.3500.10 114 492 2.9E-157 T 13-10-2018 IPR023323 Tex-like domain superfamily COP00_19100 7e9ff0dc139fcaa660f28ac5721a072a 720 Pfam PF12836 Helix-hairpin-helix motif 485 549 1.5E-25 T 13-10-2018 COP00_19100 7e9ff0dc139fcaa660f28ac5721a072a 720 Gene3D G3DSA:2.40.50.140 632 719 1.1E-24 T 13-10-2018 COP00_14240 5439ea68dc2f3da2ef7c385a9d3d161a 460 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 28 111 6.6E-20 T 13-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 COP00_14240 5439ea68dc2f3da2ef7c385a9d3d161a 460 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 19 36 - T 13-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 COP00_14240 5439ea68dc2f3da2ef7c385a9d3d161a 460 TIGRFAM TIGR00852 pts-Glc: PTS system, maltose and glucose-specific subfamily, IIC component 153 439 2.4E-95 T 13-10-2018 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component GO:0008982|GO:0009401|GO:0016021 COP00_14240 5439ea68dc2f3da2ef7c385a9d3d161a 460 Gene3D G3DSA:3.30.1360.60 1 77 5.7E-28 T 13-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 COP00_14240 5439ea68dc2f3da2ef7c385a9d3d161a 460 TIGRFAM TIGR01996 PTS-II-BC-sucr: PTS system, sucrose-specific IIBC component 2 450 1.3E-194 T 13-10-2018 IPR010973 Phosphotransferase system, sucrose-specific IIBC component GO:0008982|GO:0009401|GO:0016021 COP00_14240 5439ea68dc2f3da2ef7c385a9d3d161a 460 Pfam PF00367 phosphotransferase system, EIIB 9 41 4.6E-15 T 13-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 COP00_14240 5439ea68dc2f3da2ef7c385a9d3d161a 460 Pfam PF02378 Phosphotransferase system, EIIC 110 394 6.9E-53 T 13-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 COP00_14240 5439ea68dc2f3da2ef7c385a9d3d161a 460 SUPERFAMILY SSF55604 6 81 1.57E-21 T 13-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 COP00_10670 2a40e77e9be139e777ae01df8971e983 332 Gene3D G3DSA:3.50.50.60 7 304 2.7E-122 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily COP00_10670 2a40e77e9be139e777ae01df8971e983 332 SUPERFAMILY SSF51905 8 314 4.07E-41 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily COP00_10670 2a40e77e9be139e777ae01df8971e983 332 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 293 1.2E-29 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 COP00_10670 2a40e77e9be139e777ae01df8971e983 332 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 113 121 3.5E-20 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 COP00_10670 2a40e77e9be139e777ae01df8971e983 332 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 9 31 3.5E-20 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 COP00_10670 2a40e77e9be139e777ae01df8971e983 332 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 66 76 3.5E-20 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 COP00_10670 2a40e77e9be139e777ae01df8971e983 332 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 203 219 3.5E-20 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 COP00_10670 2a40e77e9be139e777ae01df8971e983 332 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 152 176 3.5E-20 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 COP00_10670 2a40e77e9be139e777ae01df8971e983 332 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 156 174 4.6E-17 T 13-10-2018 COP00_10670 2a40e77e9be139e777ae01df8971e983 332 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 10 29 4.6E-17 T 13-10-2018 COP00_10670 2a40e77e9be139e777ae01df8971e983 332 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 265 287 4.6E-17 T 13-10-2018 COP00_10670 2a40e77e9be139e777ae01df8971e983 332 Hamap MF_01685 Ferredoxin--NADP reductase. 7 328 44.76 T 13-10-2018 IPR022890 Ferredoxin--NADP reductase, type 2 GO:0004324|GO:0055114 KEGG: 00195+1.18.1.2|MetaCyc: PWY-101 COP00_10670 2a40e77e9be139e777ae01df8971e983 332 Gene3D G3DSA:3.50.50.60 128 246 2.7E-122 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily COP00_08380 1e243f6b95d12a9bfb0341ef094ec47c 288 Gene3D G3DSA:3.90.1170.20 13 273 2.1E-102 T 13-10-2018 IPR037128 Quinolinate phosphoribosyl transferase, N-terminal domain superfamily GO:0016763 Reactome: R-HSA-196807 COP00_08380 1e243f6b95d12a9bfb0341ef094ec47c 288 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 18 107 1.3E-26 T 13-10-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 COP00_08380 1e243f6b95d12a9bfb0341ef094ec47c 288 Gene3D G3DSA:3.20.20.70 123 265 2.1E-102 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 COP00_08380 1e243f6b95d12a9bfb0341ef094ec47c 288 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 109 273 1.9E-62 T 13-10-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 Reactome: R-HSA-196807 COP00_08380 1e243f6b95d12a9bfb0341ef094ec47c 288 PIRSF PIRSF006250 1 278 3.2E-103 T 13-10-2018 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 COP00_08380 1e243f6b95d12a9bfb0341ef094ec47c 288 SUPERFAMILY SSF51690 109 275 3.22E-57 T 13-10-2018 IPR036068 Nicotinate phosphoribosyltransferase-like, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 COP00_08380 1e243f6b95d12a9bfb0341ef094ec47c 288 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 10 274 1.2E-101 T 13-10-2018 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|Reactome: R-HSA-196807 COP00_08380 1e243f6b95d12a9bfb0341ef094ec47c 288 SUPERFAMILY SSF54675 3 108 4.32E-30 T 13-10-2018 COP00_10265 e3c37a14f1cc573e92bbef33e239610c 133 TIGRFAM TIGR00149 TIGR00149_YjbQ: secondary thiamine-phosphate synthase enzyme 4 131 6.4E-57 T 13-10-2018 IPR001602 Uncharacterised protein family UPF0047 COP00_10265 e3c37a14f1cc573e92bbef33e239610c 133 PIRSF PIRSF004681 1 133 1.5E-38 T 13-10-2018 IPR001602 Uncharacterised protein family UPF0047 COP00_10265 e3c37a14f1cc573e92bbef33e239610c 133 Gene3D G3DSA:2.60.120.460 1 133 6.1E-56 T 13-10-2018 IPR035917 YjbQ-like superfamily COP00_10265 e3c37a14f1cc573e92bbef33e239610c 133 Pfam PF01894 Uncharacterised protein family UPF0047 17 130 2.1E-41 T 13-10-2018 IPR001602 Uncharacterised protein family UPF0047 COP00_10265 e3c37a14f1cc573e92bbef33e239610c 133 SUPERFAMILY SSF111038 3 133 2.09E-48 T 13-10-2018 IPR035917 YjbQ-like superfamily COP00_10265 e3c37a14f1cc573e92bbef33e239610c 133 ProSitePatterns PS01314 Uncharacterized protein family UPF0047 signature. 95 113 - T 13-10-2018 IPR001602 Uncharacterised protein family UPF0047 COP00_06005 7bec6970f92c14f9934510ee18525f69 376 Pfam PF13424 Tetratricopeptide repeat 222 291 8.3E-9 T 13-10-2018 COP00_06005 7bec6970f92c14f9934510ee18525f69 376 SMART SM00028 259 292 0.77 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 COP00_06005 7bec6970f92c14f9934510ee18525f69 376 SMART SM00028 180 213 210.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 COP00_06005 7bec6970f92c14f9934510ee18525f69 376 SMART SM00028 220 253 5.2E-4 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 COP00_06005 7bec6970f92c14f9934510ee18525f69 376 SMART SM00028 139 172 170.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 COP00_06005 7bec6970f92c14f9934510ee18525f69 376 SMART SM00028 99 132 460.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 COP00_06005 7bec6970f92c14f9934510ee18525f69 376 Gene3D G3DSA:1.25.40.10 1 376 3.3E-125 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 COP00_06005 7bec6970f92c14f9934510ee18525f69 376 SUPERFAMILY SSF48452 117 309 2.28E-19 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 COP00_15445 f354dabcbf111bfe2b820bf1a4c4b109 330 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 1.0E-15 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 COP00_15445 f354dabcbf111bfe2b820bf1a4c4b109 330 Gene3D G3DSA:3.40.50.2300 152 290 3.9E-41 T 13-10-2018 COP00_15445 f354dabcbf111bfe2b820bf1a4c4b109 330 Gene3D G3DSA:1.10.260.40 1 47 3.6E-17 T 13-10-2018 COP00_15445 f354dabcbf111bfe2b820bf1a4c4b109 330 SUPERFAMILY SSF53822 58 329 1.95E-41 T 13-10-2018 IPR028082 Periplasmic binding protein-like I COP00_15445 f354dabcbf111bfe2b820bf1a4c4b109 330 Gene3D G3DSA:3.40.50.2300 110 306 3.9E-41 T 13-10-2018 COP00_15445 f354dabcbf111bfe2b820bf1a4c4b109 330 SMART SM00354 1 61 1.8E-9 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 COP00_15445 f354dabcbf111bfe2b820bf1a4c4b109 330 SUPERFAMILY SSF47413 3 51 1.74E-13 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 COP00_15445 f354dabcbf111bfe2b820bf1a4c4b109 330 Pfam PF13377 Periplasmic binding protein-like domain 161 329 2.3E-39 T 13-10-2018 COP00_24085 231f60ff6bf54f0971b770da1f66d6c0 449 Pfam PF02386 Cation transport protein 32 430 3.6E-62 T 13-10-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 COP00_03330 2884bdec07256bf7753c2d0b7c9b8e8c 854 Pfam PF12708 Pectate lyase superfamily protein 120 344 7.5E-18 T 13-10-2018 IPR024535 Pectate lyase superfamily protein COP00_03330 2884bdec07256bf7753c2d0b7c9b8e8c 854 SUPERFAMILY SSF51126 118 407 1.1E-34 T 13-10-2018 IPR011050 Pectin lyase fold/virulence factor COP00_03330 2884bdec07256bf7753c2d0b7c9b8e8c 854 Gene3D G3DSA:2.40.300.10 687 849 2.0E-65 T 13-10-2018 COP00_03330 2884bdec07256bf7753c2d0b7c9b8e8c 854 SMART SM00710 299 331 750.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat COP00_03330 2884bdec07256bf7753c2d0b7c9b8e8c 854 SMART SM00710 333 354 580.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat COP00_03330 2884bdec07256bf7753c2d0b7c9b8e8c 854 SMART SM00710 276 298 97.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat COP00_03330 2884bdec07256bf7753c2d0b7c9b8e8c 854 SMART SM00710 487 509 1300.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat COP00_03330 2884bdec07256bf7753c2d0b7c9b8e8c 854 SMART SM00710 458 480 100.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat COP00_03330 2884bdec07256bf7753c2d0b7c9b8e8c 854 SMART SM00710 238 260 1700.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat COP00_03330 2884bdec07256bf7753c2d0b7c9b8e8c 854 Gene3D G3DSA:2.160.20.10 107 566 2.9E-128 T 13-10-2018 IPR012334 Pectin lyase fold COP00_03330 2884bdec07256bf7753c2d0b7c9b8e8c 854 Pfam PF11962 Peptidase_G2, IMC autoproteolytic cleavage domain 632 850 2.0E-77 T 13-10-2018 IPR021865 Peptidase G2, IMC autoproteolytic cleavage domain COP00_03330 2884bdec07256bf7753c2d0b7c9b8e8c 854 Gene3D G3DSA:4.10.80.40 740 778 2.0E-65 T 13-10-2018 COP00_19760 2884bdec07256bf7753c2d0b7c9b8e8c 854 Pfam PF12708 Pectate lyase superfamily protein 120 344 7.5E-18 T 13-10-2018 IPR024535 Pectate lyase superfamily protein COP00_19760 2884bdec07256bf7753c2d0b7c9b8e8c 854 SUPERFAMILY SSF51126 118 407 1.1E-34 T 13-10-2018 IPR011050 Pectin lyase fold/virulence factor COP00_19760 2884bdec07256bf7753c2d0b7c9b8e8c 854 Gene3D G3DSA:2.40.300.10 687 849 2.0E-65 T 13-10-2018 COP00_19760 2884bdec07256bf7753c2d0b7c9b8e8c 854 SMART SM00710 299 331 750.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat COP00_19760 2884bdec07256bf7753c2d0b7c9b8e8c 854 SMART SM00710 333 354 580.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat COP00_19760 2884bdec07256bf7753c2d0b7c9b8e8c 854 SMART SM00710 276 298 97.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat COP00_19760 2884bdec07256bf7753c2d0b7c9b8e8c 854 SMART SM00710 487 509 1300.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat COP00_19760 2884bdec07256bf7753c2d0b7c9b8e8c 854 SMART SM00710 458 480 100.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat COP00_19760 2884bdec07256bf7753c2d0b7c9b8e8c 854 SMART SM00710 238 260 1700.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat COP00_19760 2884bdec07256bf7753c2d0b7c9b8e8c 854 Gene3D G3DSA:2.160.20.10 107 566 2.9E-128 T 13-10-2018 IPR012334 Pectin lyase fold COP00_19760 2884bdec07256bf7753c2d0b7c9b8e8c 854 Pfam PF11962 Peptidase_G2, IMC autoproteolytic cleavage domain 632 850 2.0E-77 T 13-10-2018 IPR021865 Peptidase G2, IMC autoproteolytic cleavage domain COP00_19760 2884bdec07256bf7753c2d0b7c9b8e8c 854 Gene3D G3DSA:4.10.80.40 740 778 2.0E-65 T 13-10-2018 COP00_07280 085c3a73956aebbd36fcf957efe050ab 57 Gene3D G3DSA:1.20.5.1150 16 56 2.7E-18 T 13-10-2018 IPR038380 Ribosomal protein S21 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_07280 085c3a73956aebbd36fcf957efe050ab 57 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 13-10-2018 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 COP00_07280 085c3a73956aebbd36fcf957efe050ab 57 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 20.733 T 13-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_07280 085c3a73956aebbd36fcf957efe050ab 57 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 16 43 8.0E-9 T 13-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_07280 085c3a73956aebbd36fcf957efe050ab 57 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 1.7E-15 T 13-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_07280 085c3a73956aebbd36fcf957efe050ab 57 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 1.7E-15 T 13-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_07280 085c3a73956aebbd36fcf957efe050ab 57 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 1.7E-15 T 13-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_07280 085c3a73956aebbd36fcf957efe050ab 57 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 1.7E-15 T 13-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_07280 085c3a73956aebbd36fcf957efe050ab 57 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 3 57 1.6E-21 T 13-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_07280 085c3a73956aebbd36fcf957efe050ab 57 Pfam PF01165 Ribosomal protein S21 5 57 1.4E-20 T 13-10-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_05280 d4d4c93025f2abd4554cd96b040af7c8 66 Pfam PF00313 'Cold-shock' DNA-binding domain 3 65 1.5E-29 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 COP00_05280 d4d4c93025f2abd4554cd96b040af7c8 66 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 33 - T 13-10-2018 IPR019844 Cold-shock conserved site COP00_05280 d4d4c93025f2abd4554cd96b040af7c8 66 SMART SM00357 3 66 2.0E-29 T 13-10-2018 IPR011129 Cold shock domain GO:0003676 COP00_05280 d4d4c93025f2abd4554cd96b040af7c8 66 Gene3D G3DSA:2.40.50.140 1 66 5.9E-30 T 13-10-2018 COP00_05280 d4d4c93025f2abd4554cd96b040af7c8 66 PIRSF PIRSF002599 1 66 5.0E-24 T 13-10-2018 IPR012156 Cold shock, CspA GO:0003676 COP00_05280 d4d4c93025f2abd4554cd96b040af7c8 66 SUPERFAMILY SSF50249 1 65 9.04E-25 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold COP00_05280 d4d4c93025f2abd4554cd96b040af7c8 66 PRINTS PR00050 Cold shock protein signature 39 57 5.0E-19 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 COP00_05280 d4d4c93025f2abd4554cd96b040af7c8 66 PRINTS PR00050 Cold shock protein signature 24 33 5.0E-19 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 COP00_05280 d4d4c93025f2abd4554cd96b040af7c8 66 PRINTS PR00050 Cold shock protein signature 4 19 5.0E-19 T 13-10-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 COP00_15465 2c4216664bc02fd41e99765b6504f812 388 Gene3D G3DSA:3.30.420.40 90 376 6.3E-93 T 13-10-2018 COP00_15465 2c4216664bc02fd41e99765b6504f812 388 SUPERFAMILY SSF46785 8 73 1.94E-19 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_15465 2c4216664bc02fd41e99765b6504f812 388 Pfam PF12802 MarR family 17 60 1.2E-8 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 COP00_15465 2c4216664bc02fd41e99765b6504f812 388 Pfam PF00480 ROK family 83 380 2.3E-70 T 13-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 COP00_15465 2c4216664bc02fd41e99765b6504f812 388 Gene3D G3DSA:3.30.420.40 205 367 6.3E-93 T 13-10-2018 COP00_15465 2c4216664bc02fd41e99765b6504f812 388 SUPERFAMILY SSF53067 81 385 3.24E-63 T 13-10-2018 COP00_15465 2c4216664bc02fd41e99765b6504f812 388 SMART SM00419 19 75 5.4E-5 T 13-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 COP00_15465 2c4216664bc02fd41e99765b6504f812 388 Gene3D G3DSA:1.10.10.10 1 77 1.1E-23 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_15465 2c4216664bc02fd41e99765b6504f812 388 ProSitePatterns PS01125 ROK family signature. 215 242 - T 13-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 COP00_17835 383b01eb7a2bd479d3e0c8d18590943e 300 Gene3D G3DSA:1.10.10.10 1 90 2.1E-23 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_17835 383b01eb7a2bd479d3e0c8d18590943e 300 Pfam PF03466 LysR substrate binding domain 87 291 6.4E-45 T 13-10-2018 IPR005119 LysR, substrate-binding COP00_17835 383b01eb7a2bd479d3e0c8d18590943e 300 Gene3D G3DSA:3.40.190.290 91 297 1.4E-44 T 13-10-2018 COP00_17835 383b01eb7a2bd479d3e0c8d18590943e 300 SUPERFAMILY SSF53850 88 294 1.67E-42 T 13-10-2018 COP00_17835 383b01eb7a2bd479d3e0c8d18590943e 300 SUPERFAMILY SSF46785 1 110 5.08E-21 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_17835 383b01eb7a2bd479d3e0c8d18590943e 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.5E-7 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 COP00_17835 383b01eb7a2bd479d3e0c8d18590943e 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.5E-7 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 COP00_17835 383b01eb7a2bd479d3e0c8d18590943e 300 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.5E-7 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 COP00_17835 383b01eb7a2bd479d3e0c8d18590943e 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 4.2E-20 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 COP00_20730 aac2016f4afebfdb1ee83ba3c868dfd0 230 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 187 215 - T 13-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 COP00_20730 aac2016f4afebfdb1ee83ba3c868dfd0 230 SUPERFAMILY SSF51161 2 127 3.89E-27 T 13-10-2018 IPR011004 Trimeric LpxA-like superfamily COP00_20730 aac2016f4afebfdb1ee83ba3c868dfd0 230 Gene3D G3DSA:2.160.10.10 1 64 4.3E-14 T 13-10-2018 COP00_20730 aac2016f4afebfdb1ee83ba3c868dfd0 230 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 85 113 - T 13-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 COP00_20730 aac2016f4afebfdb1ee83ba3c868dfd0 230 Gene3D G3DSA:2.160.10.10 65 229 3.0E-42 T 13-10-2018 COP00_20730 aac2016f4afebfdb1ee83ba3c868dfd0 230 SUPERFAMILY SSF51161 94 230 5.11E-35 T 13-10-2018 IPR011004 Trimeric LpxA-like superfamily COP00_20730 aac2016f4afebfdb1ee83ba3c868dfd0 230 PIRSF PIRSF000441 96 162 8.6E-5 T 13-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 COP00_20730 aac2016f4afebfdb1ee83ba3c868dfd0 230 PIRSF PIRSF000441 1 58 0.0014 T 13-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 COP00_20730 aac2016f4afebfdb1ee83ba3c868dfd0 230 PIRSF PIRSF000441 169 230 2.6E-14 T 13-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 COP00_20730 aac2016f4afebfdb1ee83ba3c868dfd0 230 PIRSF PIRSF000441 72 101 0.0095 T 13-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 COP00_20730 aac2016f4afebfdb1ee83ba3c868dfd0 230 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 6 40 8.7E-8 T 13-10-2018 IPR001451 Hexapeptide repeat COP00_20730 aac2016f4afebfdb1ee83ba3c868dfd0 230 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 98 128 4.3E-5 T 13-10-2018 IPR001451 Hexapeptide repeat COP00_20730 aac2016f4afebfdb1ee83ba3c868dfd0 230 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 179 213 7.4E-10 T 13-10-2018 IPR001451 Hexapeptide repeat COP00_00805 e9f92d26ebdbae4c1a2a7a293c9b9497 538 Pfam PF10079 Bacillithiol biosynthesis BshC 1 535 1.0E-174 T 13-10-2018 IPR011199 Bacillithiol biosynthesis BshC COP00_00805 e9f92d26ebdbae4c1a2a7a293c9b9497 538 Hamap MF_01867 Putative cysteine ligase BshC [bshC]. 1 538 32.295 T 13-10-2018 IPR011199 Bacillithiol biosynthesis BshC COP00_00805 e9f92d26ebdbae4c1a2a7a293c9b9497 538 TIGRFAM TIGR03998 thiol_BshC: bacillithiol biosynthesis cysteine-adding enzyme BshC 11 536 4.2E-186 T 13-10-2018 IPR011199 Bacillithiol biosynthesis BshC COP00_00805 e9f92d26ebdbae4c1a2a7a293c9b9497 538 PIRSF PIRSF012535 1 538 5.4E-206 T 13-10-2018 IPR011199 Bacillithiol biosynthesis BshC COP00_06560 b224957983920ee25f29c79b35b03982 438 Gene3D G3DSA:2.30.42.10 147 225 5.0E-17 T 13-10-2018 COP00_06560 b224957983920ee25f29c79b35b03982 438 SUPERFAMILY SSF50156 149 227 3.68E-11 T 13-10-2018 IPR036034 PDZ superfamily GO:0005515 COP00_06560 b224957983920ee25f29c79b35b03982 438 Pfam PF05580 SpoIVB peptidase S55 216 424 1.0E-87 T 13-10-2018 IPR008763 Peptidase S55, SpoIVB COP00_06560 b224957983920ee25f29c79b35b03982 438 SMART SM00228 123 199 9.4E-7 T 13-10-2018 IPR001478 PDZ domain GO:0005515 COP00_06560 b224957983920ee25f29c79b35b03982 438 SUPERFAMILY SSF50494 357 423 2.36E-6 T 13-10-2018 IPR009003 Peptidase S1, PA clan COP00_06560 b224957983920ee25f29c79b35b03982 438 TIGRFAM TIGR02860 spore_IV_B: stage IV sporulation protein B 15 429 1.1E-176 T 13-10-2018 IPR014219 Peptidase S55, sporulation stage IV, protein B COP00_06560 b224957983920ee25f29c79b35b03982 438 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 118 195 8.4E-9 T 13-10-2018 IPR001478 PDZ domain GO:0005515 COP00_20375 e99054676aee01b0002e743abeef4bd8 390 Pfam PF09217 Restriction endonuclease EcoRII, N-terminal 22 138 6.0E-21 T 13-10-2018 IPR023372 Restriction endonuclease, type II, EcoRII, N-terminal COP00_20375 e99054676aee01b0002e743abeef4bd8 390 SUPERFAMILY SSF101936 15 144 2.75E-26 T 13-10-2018 IPR015300 DNA-binding pseudobarrel domain superfamily COP00_20375 e99054676aee01b0002e743abeef4bd8 390 Pfam PF09019 EcoRII C terminal 220 381 7.9E-58 T 13-10-2018 IPR015109 Restriction endonuclease, type II, EcoRII, C-terminal GO:0003677|GO:0009036|GO:0009307 COP00_20375 e99054676aee01b0002e743abeef4bd8 390 Gene3D G3DSA:2.40.330.10 3 153 2.0E-31 T 13-10-2018 IPR015300 DNA-binding pseudobarrel domain superfamily COP00_20375 e99054676aee01b0002e743abeef4bd8 390 SUPERFAMILY SSF52980 173 385 3.43E-56 T 13-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 COP00_20375 e99054676aee01b0002e743abeef4bd8 390 Gene3D G3DSA:3.40.91.80 154 390 2.9E-41 T 13-10-2018 IPR038365 EcoRII, C-terminal domain superfamily COP00_01565 642dabd89815bf8043fa46b1bbaa9355 371 SUPERFAMILY SSF50249 132 198 3.43E-21 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold COP00_01565 642dabd89815bf8043fa46b1bbaa9355 371 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 366 30.88 T 13-10-2018 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 COP00_01565 642dabd89815bf8043fa46b1bbaa9355 371 Gene3D G3DSA:3.30.300.20 198 276 9.2E-34 T 13-10-2018 IPR015946 K homology domain-like, alpha/beta COP00_01565 642dabd89815bf8043fa46b1bbaa9355 371 Gene3D G3DSA:3.30.1480.10 1 124 1.1E-51 T 13-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 COP00_01565 642dabd89815bf8043fa46b1bbaa9355 371 Gene3D G3DSA:2.40.50.140 136 197 7.3E-26 T 13-10-2018 COP00_01565 642dabd89815bf8043fa46b1bbaa9355 371 SMART SM00316 133 199 5.0E-14 T 13-10-2018 IPR022967 RNA-binding domain, S1 COP00_01565 642dabd89815bf8043fa46b1bbaa9355 371 SUPERFAMILY SSF54814 278 341 9.16E-16 T 13-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 COP00_01565 642dabd89815bf8043fa46b1bbaa9355 371 Pfam PF08529 NusA N-terminal domain 4 123 4.1E-46 T 13-10-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 COP00_01565 642dabd89815bf8043fa46b1bbaa9355 371 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 5 341 2.7E-130 T 13-10-2018 IPR010213 Transcription termination factor NusA GO:0003723 COP00_01565 642dabd89815bf8043fa46b1bbaa9355 371 SMART SM00322 229 292 0.63 T 13-10-2018 IPR004087 K Homology domain GO:0003676 COP00_01565 642dabd89815bf8043fa46b1bbaa9355 371 SMART SM00322 300 365 0.47 T 13-10-2018 IPR004087 K Homology domain GO:0003676 COP00_01565 642dabd89815bf8043fa46b1bbaa9355 371 SUPERFAMILY SSF69705 1 126 6.67E-45 T 13-10-2018 IPR036555 NusA, N-terminal domain superfamily GO:0003700|GO:0031554 COP00_01565 642dabd89815bf8043fa46b1bbaa9355 371 Gene3D G3DSA:3.30.300.20 278 371 3.6E-32 T 13-10-2018 IPR015946 K homology domain-like, alpha/beta COP00_01565 642dabd89815bf8043fa46b1bbaa9355 371 SUPERFAMILY SSF54814 199 276 8.5E-31 T 13-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 COP00_01565 642dabd89815bf8043fa46b1bbaa9355 371 Pfam PF13184 NusA-like KH domain 229 296 2.5E-29 T 13-10-2018 IPR025249 KH domain, NusA-like GO:0003723 COP00_01565 642dabd89815bf8043fa46b1bbaa9355 371 Pfam PF00575 S1 RNA binding domain 133 195 2.7E-15 T 13-10-2018 IPR003029 S1 domain GO:0003676 COP00_04095 ad82121e9235044f46efedb313693ddb 292 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 COP00_04095 ad82121e9235044f46efedb313693ddb 292 Pfam PF00005 ABC transporter 19 158 1.3E-25 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 COP00_04095 ad82121e9235044f46efedb313693ddb 292 SUPERFAMILY SSF52540 2 220 2.66E-51 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_04095 ad82121e9235044f46efedb313693ddb 292 SMART SM00382 28 207 2.2E-14 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_04095 ad82121e9235044f46efedb313693ddb 292 Gene3D G3DSA:3.40.50.300 2 258 1.0E-50 T 13-10-2018 COP00_19720 6a75de042f3cd9e8cb0a88405b952d85 102 TIGRFAM TIGR01563 gp16_SPP1: putative phage head-tail adaptor 5 98 1.1E-15 T 13-10-2018 IPR008767 Bacteriophage SPP1, head-tail adaptor COP00_19720 6a75de042f3cd9e8cb0a88405b952d85 102 Pfam PF05521 Phage head-tail joining protein 6 98 2.0E-22 T 13-10-2018 IPR008767 Bacteriophage SPP1, head-tail adaptor COP00_19720 6a75de042f3cd9e8cb0a88405b952d85 102 Gene3D G3DSA:2.40.10.270 2 102 4.3E-19 T 13-10-2018 IPR038666 Bacteriophage SPP1, head-tail adaptor superfamily COP00_18375 3ddfe8ba6de6a7b83235fa8f1487aea3 297 PRINTS PR00116 Arginase signature 254 268 3.0E-42 T 13-10-2018 IPR006035 Ureohydrolase GO:0046872 COP00_18375 3ddfe8ba6de6a7b83235fa8f1487aea3 297 PRINTS PR00116 Arginase signature 116 143 3.0E-42 T 13-10-2018 IPR006035 Ureohydrolase GO:0046872 COP00_18375 3ddfe8ba6de6a7b83235fa8f1487aea3 297 PRINTS PR00116 Arginase signature 219 248 3.0E-42 T 13-10-2018 IPR006035 Ureohydrolase GO:0046872 COP00_18375 3ddfe8ba6de6a7b83235fa8f1487aea3 297 PRINTS PR00116 Arginase signature 170 188 3.0E-42 T 13-10-2018 IPR006035 Ureohydrolase GO:0046872 COP00_18375 3ddfe8ba6de6a7b83235fa8f1487aea3 297 PRINTS PR00116 Arginase signature 93 108 3.0E-42 T 13-10-2018 IPR006035 Ureohydrolase GO:0046872 COP00_18375 3ddfe8ba6de6a7b83235fa8f1487aea3 297 PIRSF PIRSF036979 1 295 1.1E-37 T 13-10-2018 IPR006035 Ureohydrolase GO:0046872 COP00_18375 3ddfe8ba6de6a7b83235fa8f1487aea3 297 Gene3D G3DSA:3.40.800.10 2 297 1.0E-114 T 13-10-2018 COP00_18375 3ddfe8ba6de6a7b83235fa8f1487aea3 297 TIGRFAM TIGR01229 rocF_arginase: arginase 6 297 2.3E-116 T 13-10-2018 IPR014033 Arginase GO:0004053|GO:0006525|GO:0046872 KEGG: 00220+3.5.3.1|KEGG: 00330+3.5.3.1|MetaCyc: PWY-31|MetaCyc: PWY-4984|MetaCyc: PWY-6305|MetaCyc: PWY-6922|Reactome: R-HSA-70635 COP00_18375 3ddfe8ba6de6a7b83235fa8f1487aea3 297 SUPERFAMILY SSF52768 4 295 2.16E-96 T 13-10-2018 IPR023696 Ureohydrolase domain superfamily COP00_18375 3ddfe8ba6de6a7b83235fa8f1487aea3 297 Pfam PF00491 Arginase family 4 292 1.6E-82 T 13-10-2018 IPR006035 Ureohydrolase GO:0046872 COP00_18375 3ddfe8ba6de6a7b83235fa8f1487aea3 297 ProSitePatterns PS01053 Arginase family signature. 222 243 - T 13-10-2018 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 COP00_09565 eabb408088f0fe385bd2e45aac806a97 425 SUPERFAMILY SSF51735 3 160 4.16E-31 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily COP00_09565 eabb408088f0fe385bd2e45aac806a97 425 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 3 129 1.9E-17 T 13-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 COP00_09565 eabb408088f0fe385bd2e45aac806a97 425 SUPERFAMILY SSF55347 134 346 8.01E-31 T 13-10-2018 COP00_09565 eabb408088f0fe385bd2e45aac806a97 425 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 141 258 2.6E-25 T 13-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 COP00_09565 eabb408088f0fe385bd2e45aac806a97 425 Gene3D G3DSA:3.40.50.720 2 139 1.0E-20 T 13-10-2018 COP00_07710 575cdab740b8d8605eb509b11034c1d5 271 Gene3D G3DSA:3.30.1240.10 83 189 1.6E-79 T 13-10-2018 COP00_07710 575cdab740b8d8605eb509b11034c1d5 271 Gene3D G3DSA:3.40.50.1000 6 259 1.6E-79 T 13-10-2018 IPR023214 HAD superfamily COP00_07710 575cdab740b8d8605eb509b11034c1d5 271 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 259 1.6E-60 T 13-10-2018 COP00_07710 575cdab740b8d8605eb509b11034c1d5 271 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 232 1.1E-23 T 13-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 COP00_07710 575cdab740b8d8605eb509b11034c1d5 271 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 259 1.1E-57 T 13-10-2018 IPR000150 Cof family GO:0016787 COP00_07710 575cdab740b8d8605eb509b11034c1d5 271 SUPERFAMILY SSF56784 1 264 5.56E-68 T 13-10-2018 IPR036412 HAD-like superfamily COP00_07710 575cdab740b8d8605eb509b11034c1d5 271 ProSitePatterns PS01229 Hypothetical cof family signature 2. 213 235 - T 13-10-2018 COP00_10200 9a6e4776800acdea0b0c52d2c0c24fcc 68 Pfam PF09855 Nucleic-acid-binding protein containing Zn-ribbon domain (DUF2082) 6 68 5.1E-30 T 13-10-2018 IPR018652 Protein of unknown function DUF2082, nucleic-acid-binding, Zn-ribbon COP00_01510 1d1b66c1450fa42fd54ee3959b20f646 240 Hamap MF_01220_B Uridylate kinase [pyrH]. 4 238 44.773 T 13-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 COP00_01510 1d1b66c1450fa42fd54ee3959b20f646 240 Pfam PF00696 Amino acid kinase family 7 217 7.1E-28 T 13-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 COP00_01510 1d1b66c1450fa42fd54ee3959b20f646 240 SUPERFAMILY SSF53633 4 238 1.57E-73 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily COP00_01510 1d1b66c1450fa42fd54ee3959b20f646 240 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 6 237 4.1E-102 T 13-10-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 COP00_01510 1d1b66c1450fa42fd54ee3959b20f646 240 Gene3D G3DSA:3.40.1160.10 1 239 3.2E-80 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily COP00_01510 1d1b66c1450fa42fd54ee3959b20f646 240 PIRSF PIRSF005650 1 240 2.1E-96 T 13-10-2018 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 COP00_20450 e82642aa5d5e146dc46137b0772354de 475 Pfam PF00392 Bacterial regulatory proteins, gntR family 5 68 3.0E-17 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 COP00_20450 e82642aa5d5e146dc46137b0772354de 475 SUPERFAMILY SSF53383 96 464 3.06E-92 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase COP00_20450 e82642aa5d5e146dc46137b0772354de 475 Gene3D G3DSA:3.90.1150.10 105 465 4.2E-109 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 COP00_20450 e82642aa5d5e146dc46137b0772354de 475 Gene3D G3DSA:1.10.10.10 1 69 6.7E-23 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_20450 e82642aa5d5e146dc46137b0772354de 475 SUPERFAMILY SSF46785 3 77 2.19E-21 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_20450 e82642aa5d5e146dc46137b0772354de 475 Pfam PF00155 Aminotransferase class I and II 111 456 1.2E-33 T 13-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 COP00_20450 e82642aa5d5e146dc46137b0772354de 475 Gene3D G3DSA:3.40.640.10 145 362 4.2E-109 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 COP00_20450 e82642aa5d5e146dc46137b0772354de 475 SMART SM00345 9 68 4.9E-17 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 COP00_20450 e82642aa5d5e146dc46137b0772354de 475 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 28 42 7.4E-8 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 COP00_20450 e82642aa5d5e146dc46137b0772354de 475 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 42 58 7.4E-8 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 COP00_11405 ef3957211146be720e6fffe60f81b4a5 770 Pfam PF01055 Glycosyl hydrolases family 31 237 664 1.4E-127 T 13-10-2018 IPR000322 Glycoside hydrolase family 31 GO:0004553|GO:0005975 COP00_11405 ef3957211146be720e6fffe60f81b4a5 770 Gene3D G3DSA:2.60.40.1760 1 241 1.7E-74 T 13-10-2018 COP00_11405 ef3957211146be720e6fffe60f81b4a5 770 Gene3D G3DSA:3.20.20.80 244 613 1.6E-153 T 13-10-2018 COP00_11405 ef3957211146be720e6fffe60f81b4a5 770 Gene3D G3DSA:2.60.40.1180 614 661 6.4E-18 T 13-10-2018 IPR013780 Glycosyl hydrolase, all-beta COP00_11405 ef3957211146be720e6fffe60f81b4a5 770 SUPERFAMILY SSF74650 1 241 3.45E-61 T 13-10-2018 IPR011013 Galactose mutarotase-like domain superfamily GO:0003824|GO:0005975|GO:0030246 COP00_11405 ef3957211146be720e6fffe60f81b4a5 770 SUPERFAMILY SSF51011 583 662 4.53E-21 T 13-10-2018 COP00_11405 ef3957211146be720e6fffe60f81b4a5 770 Gene3D G3DSA:2.60.40.1180 662 769 4.7E-24 T 13-10-2018 IPR013780 Glycosyl hydrolase, all-beta COP00_11405 ef3957211146be720e6fffe60f81b4a5 770 Pfam PF13802 Galactose mutarotase-like 156 211 3.5E-16 T 13-10-2018 IPR025887 Glycoside hydrolase family 31, N-terminal domain COP00_11405 ef3957211146be720e6fffe60f81b4a5 770 SUPERFAMILY SSF117125 663 767 2.09E-27 T 13-10-2018 COP00_11405 ef3957211146be720e6fffe60f81b4a5 770 SUPERFAMILY SSF51445 245 581 4.22E-94 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily COP00_00590 85ffbc818e2d77bc4b641e674896c15d 211 Pfam PF06335 Protein of unknown function (DUF1054) 6 203 3.4E-81 T 13-10-2018 IPR009403 Protein of unknown function UPF0637 COP00_00590 85ffbc818e2d77bc4b641e674896c15d 211 SUPERFAMILY SSF142913 4 208 4.97E-80 T 13-10-2018 COP00_00590 85ffbc818e2d77bc4b641e674896c15d 211 Gene3D G3DSA:3.30.930.20 1 211 2.2E-86 T 13-10-2018 COP00_00590 85ffbc818e2d77bc4b641e674896c15d 211 PIRSF PIRSF021332 1 209 3.0E-89 T 13-10-2018 IPR009403 Protein of unknown function UPF0637 COP00_00590 85ffbc818e2d77bc4b641e674896c15d 211 Hamap MF_01851 UPF0637 protein . 5 205 37.282 T 13-10-2018 IPR009403 Protein of unknown function UPF0637 COP00_08315 000b77d7777aeadc9797b406fb216e11 334 SUPERFAMILY SSF52540 21 255 2.47E-56 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_08315 000b77d7777aeadc9797b406fb216e11 334 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 24 328 2.5E-151 T 13-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 COP00_08315 000b77d7777aeadc9797b406fb216e11 334 Gene3D G3DSA:1.10.8.60 183 257 9.6E-31 T 13-10-2018 COP00_08315 000b77d7777aeadc9797b406fb216e11 334 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 5 235 7.7E-119 T 13-10-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 COP00_08315 000b77d7777aeadc9797b406fb216e11 334 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 252 325 5.0E-36 T 13-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 COP00_08315 000b77d7777aeadc9797b406fb216e11 334 SMART SM00382 52 183 2.2E-12 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_08315 000b77d7777aeadc9797b406fb216e11 334 SUPERFAMILY SSF46785 257 331 3.08E-25 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_08315 000b77d7777aeadc9797b406fb216e11 334 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 254 327 9.1E-34 T 13-10-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 COP00_08315 000b77d7777aeadc9797b406fb216e11 334 Gene3D G3DSA:1.10.10.10 258 330 5.6E-32 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_08315 000b77d7777aeadc9797b406fb216e11 334 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 334 175.507 T 13-10-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 COP00_08315 000b77d7777aeadc9797b406fb216e11 334 Gene3D G3DSA:3.40.50.300 20 182 7.9E-41 T 13-10-2018 COP00_21745 e0da8add6fb5ca87c80650fd317c1a68 403 SUPERFAMILY SSF52343 262 393 8.77E-34 T 13-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain COP00_21745 e0da8add6fb5ca87c80650fd317c1a68 403 Pfam PF00970 Oxidoreductase FAD-binding domain 156 258 3.8E-9 T 13-10-2018 IPR008333 Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain Reactome: R-HSA-1237044 COP00_21745 e0da8add6fb5ca87c80650fd317c1a68 403 Pfam PF00175 Oxidoreductase NAD-binding domain 270 374 3.5E-17 T 13-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 COP00_21745 e0da8add6fb5ca87c80650fd317c1a68 403 Pfam PF00042 Globin 8 103 1.3E-11 T 13-10-2018 IPR000971 Globin GO:0020037 COP00_21745 e0da8add6fb5ca87c80650fd317c1a68 403 SUPERFAMILY SSF63380 150 260 6.27E-30 T 13-10-2018 IPR017938 Riboflavin synthase-like beta-barrel COP00_21745 e0da8add6fb5ca87c80650fd317c1a68 403 Gene3D G3DSA:1.10.490.10 1 145 3.8E-59 T 13-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 COP00_21745 e0da8add6fb5ca87c80650fd317c1a68 403 Gene3D G3DSA:2.40.30.10 150 258 6.2E-37 T 13-10-2018 COP00_21745 e0da8add6fb5ca87c80650fd317c1a68 403 SUPERFAMILY SSF46458 1 146 5.99E-42 T 13-10-2018 IPR009050 Globin-like superfamily COP00_21745 e0da8add6fb5ca87c80650fd317c1a68 403 Gene3D G3DSA:3.40.50.80 259 399 1.2E-35 T 13-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain COP00_21745 e0da8add6fb5ca87c80650fd317c1a68 403 PRINTS PR00410 Phenol hydroxylase reductase family signature 184 196 4.7E-9 T 13-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 COP00_21745 e0da8add6fb5ca87c80650fd317c1a68 403 PRINTS PR00410 Phenol hydroxylase reductase family signature 361 369 4.7E-9 T 13-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 COP00_21745 e0da8add6fb5ca87c80650fd317c1a68 403 PRINTS PR00410 Phenol hydroxylase reductase family signature 269 288 4.7E-9 T 13-10-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 COP00_14570 8c0ca7c54296b95e4dde9962b2ae26d1 442 PRINTS PR00732 Glycosyl hydrolase family 4 signature 98 111 3.2E-54 T 13-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 COP00_14570 8c0ca7c54296b95e4dde9962b2ae26d1 442 PRINTS PR00732 Glycosyl hydrolase family 4 signature 6 21 3.2E-54 T 13-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 COP00_14570 8c0ca7c54296b95e4dde9962b2ae26d1 442 PRINTS PR00732 Glycosyl hydrolase family 4 signature 193 205 3.2E-54 T 13-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 COP00_14570 8c0ca7c54296b95e4dde9962b2ae26d1 442 PRINTS PR00732 Glycosyl hydrolase family 4 signature 77 93 3.2E-54 T 13-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 COP00_14570 8c0ca7c54296b95e4dde9962b2ae26d1 442 PRINTS PR00732 Glycosyl hydrolase family 4 signature 112 132 3.2E-54 T 13-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 COP00_14570 8c0ca7c54296b95e4dde9962b2ae26d1 442 PRINTS PR00732 Glycosyl hydrolase family 4 signature 141 158 3.2E-54 T 13-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 COP00_14570 8c0ca7c54296b95e4dde9962b2ae26d1 442 PRINTS PR00732 Glycosyl hydrolase family 4 signature 167 178 3.2E-54 T 13-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 COP00_14570 8c0ca7c54296b95e4dde9962b2ae26d1 442 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 197 412 2.8E-50 T 13-10-2018 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 COP00_14570 8c0ca7c54296b95e4dde9962b2ae26d1 442 Gene3D G3DSA:3.40.50.720 1 170 7.2E-74 T 13-10-2018 COP00_14570 8c0ca7c54296b95e4dde9962b2ae26d1 442 ProSitePatterns PS01324 Glycosyl hydrolases family 4 signature. 141 172 - T 13-10-2018 IPR019802 Glycoside hydrolase, family 4, conserved site GO:0004553|GO:0005975 COP00_14570 8c0ca7c54296b95e4dde9962b2ae26d1 442 SUPERFAMILY SSF51735 4 170 2.96E-57 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily COP00_14570 8c0ca7c54296b95e4dde9962b2ae26d1 442 SUPERFAMILY SSF56327 173 439 2.09E-98 T 13-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 COP00_14570 8c0ca7c54296b95e4dde9962b2ae26d1 442 Pfam PF02056 Family 4 glycosyl hydrolase 6 187 7.3E-76 T 13-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 COP00_14570 8c0ca7c54296b95e4dde9962b2ae26d1 442 Gene3D G3DSA:3.90.110.10 171 442 2.7E-106 T 13-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 COP00_20680 c1c08e835d536b07e9b92468221e499d 216 Pfam PF03475 3-alpha domain 174 215 2.0E-14 T 13-10-2018 IPR005163 3-alpha domain COP00_20680 c1c08e835d536b07e9b92468221e499d 216 Gene3D G3DSA:2.40.33.20 2 216 6.5E-75 T 13-10-2018 COP00_20680 c1c08e835d536b07e9b92468221e499d 216 Pfam PF03473 MOSC domain 54 162 7.5E-22 T 13-10-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 COP00_20680 c1c08e835d536b07e9b92468221e499d 216 SUPERFAMILY SSF50800 6 214 2.88E-70 T 13-10-2018 IPR011037 Pyruvate kinase-like, insert domain superfamily COP00_04545 87ae73c8ec24f7cbfe1adfa6ddc33a9d 328 Gene3D G3DSA:3.90.25.30 164 318 2.0E-110 T 13-10-2018 COP00_04545 87ae73c8ec24f7cbfe1adfa6ddc33a9d 328 Pfam PF02719 Polysaccharide biosynthesis protein 7 274 9.9E-95 T 13-10-2018 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain COP00_04545 87ae73c8ec24f7cbfe1adfa6ddc33a9d 328 SUPERFAMILY SSF51735 1 259 2.91E-58 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily COP00_04545 87ae73c8ec24f7cbfe1adfa6ddc33a9d 328 Gene3D G3DSA:3.40.50.720 4 305 2.0E-110 T 13-10-2018 COP00_08725 0f83b08f73ed6782c7d562a5ff86fec3 254 SUPERFAMILY SSF54292 4 112 1.19E-22 T 13-10-2018 IPR036010 2Fe-2S ferredoxin-like superfamily GO:0009055|GO:0051536 COP00_08725 0f83b08f73ed6782c7d562a5ff86fec3 254 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 11 234 2.9E-39 T 13-10-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 COP00_08725 0f83b08f73ed6782c7d562a5ff86fec3 254 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 10 117 3.8E-28 T 13-10-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 COP00_08725 0f83b08f73ed6782c7d562a5ff86fec3 254 Gene3D G3DSA:3.10.20.30 1 112 1.2E-30 T 13-10-2018 IPR012675 Beta-grasp domain superfamily COP00_08725 0f83b08f73ed6782c7d562a5ff86fec3 254 SUPERFAMILY SSF46548 114 239 2.96E-27 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 COP00_08725 0f83b08f73ed6782c7d562a5ff86fec3 254 Pfam PF13237 4Fe-4S dicluster domain 149 223 6.4E-9 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain COP00_08725 0f83b08f73ed6782c7d562a5ff86fec3 254 Gene3D G3DSA:1.10.1060.10 114 249 1.6E-28 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 COP00_08725 0f83b08f73ed6782c7d562a5ff86fec3 254 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 155 166 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site COP00_09615 540608b30d1b6488371853727ace3370 301 Gene3D G3DSA:3.40.190.10 90 285 4.7E-40 T 13-10-2018 COP00_09615 540608b30d1b6488371853727ace3370 301 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 3.0E-16 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 COP00_09615 540608b30d1b6488371853727ace3370 301 Pfam PF03466 LysR substrate binding domain 86 290 1.3E-38 T 13-10-2018 IPR005119 LysR, substrate-binding COP00_09615 540608b30d1b6488371853727ace3370 301 SUPERFAMILY SSF53850 87 294 2.17E-39 T 13-10-2018 COP00_09615 540608b30d1b6488371853727ace3370 301 SUPERFAMILY SSF46785 1 110 9.8E-20 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_09615 540608b30d1b6488371853727ace3370 301 Gene3D G3DSA:1.10.10.10 1 89 5.4E-21 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_09615 540608b30d1b6488371853727ace3370 301 Gene3D G3DSA:3.40.190.10 164 264 4.7E-40 T 13-10-2018 COP00_00980 1c40deb0cd40423be38a0ba5630b4007 304 SMART SM00363 15 75 1.1E-8 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 COP00_00980 1c40deb0cd40423be38a0ba5630b4007 304 Gene3D G3DSA:3.10.290.10 3 67 3.6E-18 T 13-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 COP00_00980 1c40deb0cd40423be38a0ba5630b4007 304 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 134 148 - T 13-10-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 COP00_00980 1c40deb0cd40423be38a0ba5630b4007 304 SUPERFAMILY SSF55120 73 302 1.83E-81 T 13-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 COP00_00980 1c40deb0cd40423be38a0ba5630b4007 304 Pfam PF01479 S4 domain 15 61 2.8E-10 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 COP00_00980 1c40deb0cd40423be38a0ba5630b4007 304 Pfam PF00849 RNA pseudouridylate synthase 88 242 2.8E-35 T 13-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 COP00_00980 1c40deb0cd40423be38a0ba5630b4007 304 SUPERFAMILY SSF55174 15 101 2.86E-15 T 13-10-2018 COP00_00980 1c40deb0cd40423be38a0ba5630b4007 304 Gene3D G3DSA:3.30.2350.10 81 304 3.2E-78 T 13-10-2018 COP00_00980 1c40deb0cd40423be38a0ba5630b4007 304 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 12 301 1.7E-107 T 13-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 COP00_16160 694e2612c7f60ee988b18917bc552030 212 ProSitePatterns PS01331 Thymidylate kinase signature. 93 105 - T 13-10-2018 IPR018095 Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 COP00_16160 694e2612c7f60ee988b18917bc552030 212 Gene3D G3DSA:3.40.50.300 1 211 7.5E-68 T 13-10-2018 COP00_16160 694e2612c7f60ee988b18917bc552030 212 Hamap MF_00165 Thymidylate kinase [tmk]. 4 207 30.713 T 13-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 COP00_16160 694e2612c7f60ee988b18917bc552030 212 Pfam PF02223 Thymidylate kinase 8 198 1.6E-58 T 13-10-2018 IPR039430 Thymidylate kinase-like domain KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210 COP00_16160 694e2612c7f60ee988b18917bc552030 212 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 2 198 2.1E-64 T 13-10-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 COP00_16160 694e2612c7f60ee988b18917bc552030 212 SUPERFAMILY SSF52540 1 210 6.5E-56 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_13545 8dc4d9c4edbb10fef6718fb1d13f11bc 144 SUPERFAMILY SSF54637 1 137 5.95E-49 T 13-10-2018 IPR029069 HotDog domain superfamily COP00_13545 8dc4d9c4edbb10fef6718fb1d13f11bc 144 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 2 141 34.594 T 13-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 COP00_13545 8dc4d9c4edbb10fef6718fb1d13f11bc 144 Pfam PF07977 FabA-like domain 11 134 1.4E-36 T 13-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 COP00_13545 8dc4d9c4edbb10fef6718fb1d13f11bc 144 Gene3D G3DSA:3.10.129.10 1 140 2.8E-59 T 13-10-2018 COP00_13545 8dc4d9c4edbb10fef6718fb1d13f11bc 144 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 2 138 3.3E-57 T 13-10-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 COP00_14970 c4cce189ca3acb751b566ecc6ad19e5b 439 Pfam PF02378 Phosphotransferase system, EIIC 29 360 1.1E-40 T 13-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 COP00_14970 c4cce189ca3acb751b566ecc6ad19e5b 439 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 14 429 6.9E-98 T 13-10-2018 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 COP00_14970 c4cce189ca3acb751b566ecc6ad19e5b 439 PIRSF PIRSF006351 2 438 5.5E-132 T 13-10-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 COP00_15165 eda6d6ed9dc55d542612bf8aad14d171 474 Pfam PF16369 C-terminal of Glycosyl hydrolases family 43 368 471 3.2E-37 T 13-10-2018 IPR032291 Extracellular endo-alpha-(1->5)-L-arabinanase, C-terminal COP00_15165 eda6d6ed9dc55d542612bf8aad14d171 474 Gene3D G3DSA:2.40.128.10 380 474 4.9E-37 T 13-10-2018 COP00_15165 eda6d6ed9dc55d542612bf8aad14d171 474 Pfam PF04616 Glycosyl hydrolases family 43 33 364 1.7E-32 T 13-10-2018 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 COP00_15165 eda6d6ed9dc55d542612bf8aad14d171 474 Gene3D G3DSA:2.115.10.20 43 367 1.5E-118 T 13-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily COP00_15165 eda6d6ed9dc55d542612bf8aad14d171 474 SUPERFAMILY SSF75005 18 366 6.0E-66 T 13-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily COP00_01230 719c6217d0a1c1280d3964bb2c7f2866 328 Gene3D G3DSA:3.40.50.300 109 309 1.7E-116 T 13-10-2018 COP00_01230 719c6217d0a1c1280d3964bb2c7f2866 328 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 46 321 66.822 T 13-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 COP00_01230 719c6217d0a1c1280d3964bb2c7f2866 328 SUPERFAMILY SSF52540 121 320 1.86E-52 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_01230 719c6217d0a1c1280d3964bb2c7f2866 328 SMART SM00962 120 321 1.4E-123 T 13-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 COP00_01230 719c6217d0a1c1280d3964bb2c7f2866 328 Pfam PF00448 SRP54-type protein, GTPase domain 121 320 3.4E-82 T 13-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 COP00_01230 719c6217d0a1c1280d3964bb2c7f2866 328 Gene3D G3DSA:1.20.120.140 21 318 1.7E-116 T 13-10-2018 COP00_01230 719c6217d0a1c1280d3964bb2c7f2866 328 SMART SM00963 22 103 6.2E-27 T 13-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 COP00_01230 719c6217d0a1c1280d3964bb2c7f2866 328 SMART SM00382 119 299 5.4E-12 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_01230 719c6217d0a1c1280d3964bb2c7f2866 328 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 46 320 3.9E-120 T 13-10-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 COP00_01230 719c6217d0a1c1280d3964bb2c7f2866 328 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 294 307 - T 13-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 COP00_01230 719c6217d0a1c1280d3964bb2c7f2866 328 Pfam PF02881 SRP54-type protein, helical bundle domain 34 99 1.1E-14 T 13-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 COP00_01230 719c6217d0a1c1280d3964bb2c7f2866 328 SUPERFAMILY SSF47364 18 96 1.06E-21 T 13-10-2018 IPR036225 SRP/SRP receptor, N-terminal Reactome: R-HSA-1799339 COP00_19485 42be013227d54782a91366f5eb812a94 642 SUPERFAMILY SSF52540 4 245 6.13E-46 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_19485 42be013227d54782a91366f5eb812a94 642 Pfam PF00005 ABC transporter 19 191 1.3E-25 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 COP00_19485 42be013227d54782a91366f5eb812a94 642 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 COP00_19485 42be013227d54782a91366f5eb812a94 642 Gene3D G3DSA:1.10.287.380 555 642 2.0E-6 T 13-10-2018 IPR037118 Valyl-tRNA synthetase, tRNA-binding arm superfamily GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 COP00_19485 42be013227d54782a91366f5eb812a94 642 Gene3D G3DSA:3.40.50.300 289 554 1.8E-63 T 13-10-2018 COP00_19485 42be013227d54782a91366f5eb812a94 642 Gene3D G3DSA:3.40.50.300 1 285 1.9E-68 T 13-10-2018 COP00_19485 42be013227d54782a91366f5eb812a94 642 Pfam PF12848 ABC transporter 230 316 6.1E-27 T 13-10-2018 IPR032781 ABC-transporter extension domain COP00_19485 42be013227d54782a91366f5eb812a94 642 SUPERFAMILY SSF52540 312 533 1.8E-47 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_19485 42be013227d54782a91366f5eb812a94 642 Pfam PF16326 ABC transporter C-terminal domain 575 639 1.5E-12 T 13-10-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 COP00_19485 42be013227d54782a91366f5eb812a94 642 SMART SM00382 352 517 1.3E-14 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_19485 42be013227d54782a91366f5eb812a94 642 SMART SM00382 28 236 3.2E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_19485 42be013227d54782a91366f5eb812a94 642 ProSitePatterns PS00211 ABC transporters family signature. 445 459 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 COP00_19485 42be013227d54782a91366f5eb812a94 642 Pfam PF00005 ABC transporter 344 473 1.9E-24 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 COP00_05030 f630d66d54ed758fdcc71c98c6e47177 232 TIGRFAM TIGR00107 deoD: purine nucleoside phosphorylase 4 231 8.3E-112 T 13-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 COP00_05030 f630d66d54ed758fdcc71c98c6e47177 232 Gene3D G3DSA:3.40.50.1580 1 231 2.7E-72 T 13-10-2018 COP00_05030 f630d66d54ed758fdcc71c98c6e47177 232 SUPERFAMILY SSF53167 2 231 3.53E-89 T 13-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 COP00_05030 f630d66d54ed758fdcc71c98c6e47177 232 Hamap MF_01627 Purine nucleoside phosphorylase DeoD-type [deoD]. 1 232 45.787 T 13-10-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 COP00_05030 f630d66d54ed758fdcc71c98c6e47177 232 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 61 76 - T 13-10-2018 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-73614|Reactome: R-HSA-73621 COP00_05030 f630d66d54ed758fdcc71c98c6e47177 232 Pfam PF01048 Phosphorylase superfamily 16 217 4.8E-40 T 13-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 COP00_14560 3a80b5a17a64393722f0096112ce287b 363 Gene3D G3DSA:3.20.10.10 171 339 3.6E-136 T 13-10-2018 COP00_14560 3a80b5a17a64393722f0096112ce287b 363 PIRSF PIRSF006468 1 358 2.2E-134 T 13-10-2018 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767|Reactome: R-HSA-70895 COP00_14560 3a80b5a17a64393722f0096112ce287b 363 Pfam PF01063 Amino-transferase class IV 70 312 9.3E-34 T 13-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 COP00_14560 3a80b5a17a64393722f0096112ce287b 363 ProSitePatterns PS00770 Aminotransferases class-IV signature. 233 262 - T 13-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 COP00_14560 3a80b5a17a64393722f0096112ce287b 363 SUPERFAMILY SSF56752 5 353 6.41E-115 T 13-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 COP00_14560 3a80b5a17a64393722f0096112ce287b 363 Gene3D G3DSA:3.30.470.10 25 352 3.6E-136 T 13-10-2018 COP00_14560 3a80b5a17a64393722f0096112ce287b 363 TIGRFAM TIGR01123 ilvE_II: branched-chain amino acid aminotransferase 44 356 8.3E-125 T 13-10-2018 IPR005786 Branched-chain amino acid aminotransferase II GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767|Reactome: R-HSA-70895 COP00_10600 9743f4f24a3f44e7404988b4b97e702a 438 Gene3D G3DSA:1.25.40.680 241 404 1.2E-42 T 13-10-2018 COP00_10600 9743f4f24a3f44e7404988b4b97e702a 438 Gene3D G3DSA:1.10.510.10 1 218 3.3E-80 T 13-10-2018 COP00_10600 9743f4f24a3f44e7404988b4b97e702a 438 Pfam PF10140 WXG100 protein secretion system (Wss), protein YukC 28 384 5.1E-126 T 13-10-2018 IPR018778 Type VII secretion system EssB COP00_10600 9743f4f24a3f44e7404988b4b97e702a 438 TIGRFAM TIGR03926 T7_EssB: type VII secretion protein EssB 8 384 2.6E-125 T 13-10-2018 IPR018778 Type VII secretion system EssB COP00_12920 40e2f999b42ee92b5f1279221c2d5982 310 Hamap MF_01249 HPr kinase/phosphorylase [hprK]. 3 306 42.426 T 13-10-2018 IPR003755 HPr(Ser) kinase/phosphorylase GO:0000155|GO:0000160|GO:0005524|GO:0006109 COP00_12920 40e2f999b42ee92b5f1279221c2d5982 310 Pfam PF07475 HPr Serine kinase C-terminal domain 130 298 3.4E-77 T 13-10-2018 IPR011104 HPr kinase/phosphorylase, C-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 COP00_12920 40e2f999b42ee92b5f1279221c2d5982 310 SUPERFAMILY SSF53795 132 298 3.36E-42 T 13-10-2018 COP00_12920 40e2f999b42ee92b5f1279221c2d5982 310 Gene3D G3DSA:3.40.1390.20 1 131 1.4E-43 T 13-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily COP00_12920 40e2f999b42ee92b5f1279221c2d5982 310 TIGRFAM TIGR00679 hpr-ser: HPr(Ser) kinase/phosphatase 7 301 4.0E-119 T 13-10-2018 IPR003755 HPr(Ser) kinase/phosphorylase GO:0000155|GO:0000160|GO:0005524|GO:0006109 COP00_12920 40e2f999b42ee92b5f1279221c2d5982 310 SUPERFAMILY SSF75138 4 131 3.01E-40 T 13-10-2018 IPR028979 HPr(Ser) kinase/phosphorylase-like, N-terminal domain superfamily COP00_12920 40e2f999b42ee92b5f1279221c2d5982 310 Gene3D G3DSA:3.40.50.300 132 310 8.1E-76 T 13-10-2018 COP00_12920 40e2f999b42ee92b5f1279221c2d5982 310 Pfam PF02603 HPr Serine kinase N terminus 4 127 1.2E-40 T 13-10-2018 IPR011126 HPr(Ser) kinase/phosphorylase, N-terminal GO:0000155|GO:0000160|GO:0004672|GO:0005524|GO:0006109 COP00_08055 367e2add1abb0418cd4e7509f27d87b6 307 Gene3D G3DSA:3.40.50.1100 9 299 5.3E-115 T 13-10-2018 COP00_08055 367e2add1abb0418cd4e7509f27d87b6 307 SUPERFAMILY SSF53686 3 301 3.01E-94 T 13-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme COP00_08055 367e2add1abb0418cd4e7509f27d87b6 307 Gene3D G3DSA:3.40.50.1100 45 146 5.3E-115 T 13-10-2018 COP00_08055 367e2add1abb0418cd4e7509f27d87b6 307 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 7 292 1.3E-68 T 13-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme COP00_08055 367e2add1abb0418cd4e7509f27d87b6 307 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 33 51 - T 13-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 COP00_14625 07dcc46e11b7fcf25cc5b8aa894dac79 477 Gene3D G3DSA:1.10.4100.10 21 453 3.0E-190 T 13-10-2018 COP00_14625 07dcc46e11b7fcf25cc5b8aa894dac79 477 TIGRFAM TIGR02330 prpD: 2-methylcitrate dehydratase 10 477 1.2E-251 T 13-10-2018 IPR012705 2-methylcitrate dehydratase PrpD GO:0019629|GO:0047547|GO:0051537 KEGG: 00640+4.2.1.79 COP00_14625 07dcc46e11b7fcf25cc5b8aa894dac79 477 SUPERFAMILY SSF103378 9 476 1.57E-154 T 13-10-2018 IPR036148 MmgE/PrpD superfamily GO:0016829 COP00_14625 07dcc46e11b7fcf25cc5b8aa894dac79 477 Gene3D G3DSA:3.30.1330.120 282 420 3.0E-190 T 13-10-2018 COP00_14625 07dcc46e11b7fcf25cc5b8aa894dac79 477 Pfam PF03972 MmgE/PrpD family 14 457 7.1E-152 T 13-10-2018 IPR005656 MmgE/PrpD GO:0016829 COP00_23270 f584d3d4d50b71f2af0457c67ea4370f 193 Gene3D G3DSA:1.10.357.10 1 192 6.6E-55 T 13-10-2018 COP00_23270 f584d3d4d50b71f2af0457c67ea4370f 193 Pfam PF00440 Bacterial regulatory proteins, tetR family 11 58 1.3E-13 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 COP00_23270 f584d3d4d50b71f2af0457c67ea4370f 193 SUPERFAMILY SSF48498 79 190 3.32E-21 T 13-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily COP00_23270 f584d3d4d50b71f2af0457c67ea4370f 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 32 55 6.5E-5 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 COP00_23270 f584d3d4d50b71f2af0457c67ea4370f 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 11 24 6.5E-5 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 COP00_23270 f584d3d4d50b71f2af0457c67ea4370f 193 SUPERFAMILY SSF46689 7 73 3.49E-15 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 COP00_22800 7dc737a62b6944f8496f0bffcab26fdd 262 Pfam PF10026 Predicted Zn-dependent protease (DUF2268) 67 258 3.7E-62 T 13-10-2018 IPR018728 Domain of unknown function DUF2268 COP00_12155 13772dff8bdc2662d3de0c6b7f187107 386 Gene3D G3DSA:3.40.50.2000 21 181 1.9E-52 T 13-10-2018 COP00_12155 13772dff8bdc2662d3de0c6b7f187107 386 SUPERFAMILY SSF53756 10 314 1.01E-61 T 13-10-2018 COP00_12155 13772dff8bdc2662d3de0c6b7f187107 386 Gene3D G3DSA:3.40.50.2000 182 314 1.9E-52 T 13-10-2018 COP00_12155 13772dff8bdc2662d3de0c6b7f187107 386 Pfam PF13439 Glycosyltransferase Family 4 21 186 1.9E-14 T 13-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 COP00_12155 13772dff8bdc2662d3de0c6b7f187107 386 Pfam PF00534 Glycosyl transferases group 1 199 314 1.0E-26 T 13-10-2018 IPR001296 Glycosyl transferase, family 1 COP00_08285 a7610de37fbba7948f8a0d7f09682c42 216 Gene3D G3DSA:3.30.240.20 81 154 8.5E-25 T 13-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily COP00_08285 a7610de37fbba7948f8a0d7f09682c42 216 Gene3D G3DSA:3.30.240.20 158 215 2.1E-14 T 13-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily COP00_08285 a7610de37fbba7948f8a0d7f09682c42 216 Pfam PF04239 Protein of unknown function (DUF421) 89 190 8.3E-36 T 13-10-2018 IPR007353 Protein of unknown function DUF421 COP00_08060 57f4e4912f7c5480a65b803fccc54bc4 231 Pfam PF01048 Phosphorylase superfamily 2 227 4.5E-55 T 13-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 COP00_08060 57f4e4912f7c5480a65b803fccc54bc4 231 TIGRFAM TIGR01704 MTA/SAH-Nsdase: MTA/SAH nucleosidase 2 230 3.7E-116 T 13-10-2018 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 COP00_08060 57f4e4912f7c5480a65b803fccc54bc4 231 SUPERFAMILY SSF53167 1 229 3.53E-75 T 13-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 COP00_08060 57f4e4912f7c5480a65b803fccc54bc4 231 Hamap MF_01684 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase [mtnN]. 2 230 47.339 T 13-10-2018 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 COP00_08060 57f4e4912f7c5480a65b803fccc54bc4 231 Gene3D G3DSA:3.40.50.1580 1 231 5.8E-74 T 13-10-2018 COP00_19620 6f999c7a353ad54cc13161b267e94b87 137 Gene3D G3DSA:2.30.30.290 64 137 1.9E-16 T 13-10-2018 IPR023385 YopX-like, C-terminal COP00_19620 6f999c7a353ad54cc13161b267e94b87 137 Pfam PF09643 YopX protein 11 134 6.2E-23 T 13-10-2018 IPR019096 YopX protein COP00_19620 6f999c7a353ad54cc13161b267e94b87 137 SUPERFAMILY SSF159006 8 135 1.01E-30 T 13-10-2018 COP00_19620 6f999c7a353ad54cc13161b267e94b87 137 TIGRFAM TIGR01671 phage_TIGR01671: phage conserved hypothetical protein TIGR01671 10 135 4.9E-12 T 13-10-2018 IPR010024 Conserved hypothetical protein CHP1671 COP00_24200 29512769499cfab0cf34916a9ffec0f2 219 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 6 204 5.0E-89 T 13-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 COP00_24200 29512769499cfab0cf34916a9ffec0f2 219 SUPERFAMILY SSF52402 4 211 3.31E-66 T 13-10-2018 COP00_24200 29512769499cfab0cf34916a9ffec0f2 219 PIRSF PIRSF006293 2 218 8.7E-80 T 13-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 COP00_24200 29512769499cfab0cf34916a9ffec0f2 219 Pfam PF06508 Queuosine biosynthesis protein QueC 5 211 1.8E-87 T 13-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 COP00_24200 29512769499cfab0cf34916a9ffec0f2 219 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 4 216 51.323 T 13-10-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 COP00_24200 29512769499cfab0cf34916a9ffec0f2 219 Gene3D G3DSA:3.40.50.620 1 219 2.1E-78 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold COP00_18300 b50773632987a0ffbc1164337c6a14d3 449 Gene3D G3DSA:3.40.640.10 68 438 4.2E-83 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 COP00_18300 b50773632987a0ffbc1164337c6a14d3 449 Pfam PF00392 Bacterial regulatory proteins, gntR family 6 66 2.7E-12 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 COP00_18300 b50773632987a0ffbc1164337c6a14d3 449 SMART SM00345 7 66 5.0E-15 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 COP00_18300 b50773632987a0ffbc1164337c6a14d3 449 SUPERFAMILY SSF46785 3 76 5.91E-16 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_18300 b50773632987a0ffbc1164337c6a14d3 449 Pfam PF00155 Aminotransferase class I and II 97 438 5.2E-22 T 13-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 COP00_18300 b50773632987a0ffbc1164337c6a14d3 449 SUPERFAMILY SSF53383 64 443 1.29E-70 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase COP00_18300 b50773632987a0ffbc1164337c6a14d3 449 Gene3D G3DSA:1.10.10.10 1 67 3.9E-18 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_13830 f9a461751bcf2343b85de00ee6f0a080 244 ProSitePatterns PS00449 ATP synthase a subunit signature. 165 174 - T 13-10-2018 IPR023011 ATP synthase, F0 complex, subunit A, active site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 COP00_13830 f9a461751bcf2343b85de00ee6f0a080 244 Gene3D G3DSA:1.20.120.220 72 244 4.6E-41 T 13-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 COP00_13830 f9a461751bcf2343b85de00ee6f0a080 244 SUPERFAMILY SSF81336 73 237 5.36E-41 T 13-10-2018 IPR035908 ATP synthase, F0 complex, subunit A superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 COP00_13830 f9a461751bcf2343b85de00ee6f0a080 244 Pfam PF00119 ATP synthase A chain 20 237 4.0E-58 T 13-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 COP00_13830 f9a461751bcf2343b85de00ee6f0a080 244 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 15 239 1.2E-51 T 13-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 COP00_13830 f9a461751bcf2343b85de00ee6f0a080 244 PRINTS PR00123 ATP synthase A subunit signature 146 161 6.2E-19 T 13-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 COP00_13830 f9a461751bcf2343b85de00ee6f0a080 244 PRINTS PR00123 ATP synthase A subunit signature 162 184 6.2E-19 T 13-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 COP00_13830 f9a461751bcf2343b85de00ee6f0a080 244 PRINTS PR00123 ATP synthase A subunit signature 223 238 6.2E-19 T 13-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 COP00_13830 f9a461751bcf2343b85de00ee6f0a080 244 PRINTS PR00123 ATP synthase A subunit signature 78 94 6.2E-19 T 13-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 COP00_13830 f9a461751bcf2343b85de00ee6f0a080 244 Hamap MF_01393 ATP synthase subunit a [atpB]. 8 243 14.262 T 13-10-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 COP00_12905 1d74e620eae5ffdb86a6423b6f97d79a 215 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 181 2.5E-54 T 13-10-2018 COP00_12905 1d74e620eae5ffdb86a6423b6f97d79a 215 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 68 181 4.8E-9 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 COP00_12905 1d74e620eae5ffdb86a6423b6f97d79a 215 Gene3D G3DSA:3.40.50.1000 6 185 2.9E-51 T 13-10-2018 IPR023214 HAD superfamily COP00_12905 1d74e620eae5ffdb86a6423b6f97d79a 215 SUPERFAMILY SSF56784 1 210 6.57E-57 T 13-10-2018 IPR036412 HAD-like superfamily COP00_12905 1d74e620eae5ffdb86a6423b6f97d79a 215 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 125 141 8.6E-9 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 COP00_12905 1d74e620eae5ffdb86a6423b6f97d79a 215 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 3 14 8.6E-9 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 COP00_12905 1d74e620eae5ffdb86a6423b6f97d79a 215 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 143 163 8.6E-9 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 COP00_12905 1d74e620eae5ffdb86a6423b6f97d79a 215 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 94 107 8.6E-9 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 COP00_12905 1d74e620eae5ffdb86a6423b6f97d79a 215 Gene3D G3DSA:1.10.150.240 18 80 2.9E-51 T 13-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 COP00_12905 1d74e620eae5ffdb86a6423b6f97d79a 215 Hamap MF_01250 Pyrophosphatase PpaX [ppaX]. 1 214 46.095 T 13-10-2018 IPR023733 Pyrophosphatase PpaX GO:0016462 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 COP00_12905 1d74e620eae5ffdb86a6423b6f97d79a 215 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 75 175 1.4E-10 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 COP00_18405 0ed39366605ca5ebef291b6a4cf9be8d 189 Pfam PF02441 Flavoprotein 1 163 3.3E-27 T 13-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 COP00_18405 0ed39366605ca5ebef291b6a4cf9be8d 189 SUPERFAMILY SSF52507 1 184 1.23E-63 T 13-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 COP00_18405 0ed39366605ca5ebef291b6a4cf9be8d 189 Hamap MF_01986 Probable UbiX-like flavin prenyltransferase. 1 188 51.313 T 13-10-2018 IPR032901 Probable UbiX-like flavin prenyltransferase COP00_18405 0ed39366605ca5ebef291b6a4cf9be8d 189 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 2 182 8.0E-86 T 13-10-2018 IPR004507 Flavin prenyltransferase UbiX-like COP00_18405 0ed39366605ca5ebef291b6a4cf9be8d 189 Gene3D G3DSA:3.40.50.1950 1 189 2.7E-80 T 13-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 COP00_18405 0ed39366605ca5ebef291b6a4cf9be8d 189 Hamap MF_01984 Flavin prenyltransferase UbiX [ubiX]. 1 184 36.877 T 13-10-2018 IPR004507 Flavin prenyltransferase UbiX-like COP00_02210 5555ff98b81ebfd8634017aa7f721c61 149 SMART SM00860 23 140 1.4E-7 T 13-10-2018 IPR018958 Knr4/Smi1-like domain COP00_02210 5555ff98b81ebfd8634017aa7f721c61 149 Pfam PF14567 SMI1-KNR4 cell-wall 10 138 1.7E-28 T 13-10-2018 COP00_02210 5555ff98b81ebfd8634017aa7f721c61 149 Gene3D G3DSA:3.40.1580.10 4 149 1.6E-38 T 13-10-2018 IPR037883 Knr4/Smi1-like domain superfamily COP00_02210 5555ff98b81ebfd8634017aa7f721c61 149 SUPERFAMILY SSF160631 5 147 1.57E-35 T 13-10-2018 COP00_07465 ce78fa6ada78d21366abbe2c372e3a40 241 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 49 223 3.0E-30 T 13-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 COP00_07465 ce78fa6ada78d21366abbe2c372e3a40 241 TIGRFAM TIGR02846 spore_sigmaK: RNA polymerase sigma-K factor 5 228 3.8E-115 T 13-10-2018 IPR014209 RNA polymerase sigma-K type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 COP00_07465 ce78fa6ada78d21366abbe2c372e3a40 241 Pfam PF04542 Sigma-70 region 2 54 123 8.3E-17 T 13-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 COP00_07465 ce78fa6ada78d21366abbe2c372e3a40 241 PRINTS PR00046 Major sigma-70 factor signature 78 91 7.9E-13 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 COP00_07465 ce78fa6ada78d21366abbe2c372e3a40 241 PRINTS PR00046 Major sigma-70 factor signature 197 212 7.9E-13 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 COP00_07465 ce78fa6ada78d21366abbe2c372e3a40 241 PRINTS PR00046 Major sigma-70 factor signature 212 223 7.9E-13 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 COP00_07465 ce78fa6ada78d21366abbe2c372e3a40 241 PRINTS PR00046 Major sigma-70 factor signature 176 188 7.9E-13 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 COP00_07465 ce78fa6ada78d21366abbe2c372e3a40 241 SUPERFAMILY SSF88946 9 120 1.96E-34 T 13-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 COP00_07465 ce78fa6ada78d21366abbe2c372e3a40 241 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 78 91 - T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 COP00_07465 ce78fa6ada78d21366abbe2c372e3a40 241 PIRSF PIRSF000770 1 241 1.6E-95 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 COP00_07465 ce78fa6ada78d21366abbe2c372e3a40 241 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 197 223 - T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 COP00_07465 ce78fa6ada78d21366abbe2c372e3a40 241 Gene3D G3DSA:1.20.120.1810 19 123 1.1E-24 T 13-10-2018 COP00_07465 ce78fa6ada78d21366abbe2c372e3a40 241 Pfam PF04545 Sigma-70, region 4 173 223 6.9E-15 T 13-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 COP00_07465 ce78fa6ada78d21366abbe2c372e3a40 241 Gene3D G3DSA:1.10.10.10 154 234 1.2E-13 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_07465 ce78fa6ada78d21366abbe2c372e3a40 241 SUPERFAMILY SSF88659 139 225 4.14E-18 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like COP00_20550 962ed51e0478313ba3735d62c6950bac 448 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 248 285 - T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 COP00_20550 962ed51e0478313ba3735d62c6950bac 448 Gene3D G3DSA:3.40.640.10 62 338 1.0E-164 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 COP00_20550 962ed51e0478313ba3735d62c6950bac 448 PIRSF PIRSF000521 22 443 3.8E-30 T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 COP00_20550 962ed51e0478313ba3735d62c6950bac 448 Hamap MF_00834 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [bioA]. 1 443 53.146 T 13-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 COP00_20550 962ed51e0478313ba3735d62c6950bac 448 SUPERFAMILY SSF53383 11 443 3.48E-125 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase COP00_20550 962ed51e0478313ba3735d62c6950bac 448 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 13 441 4.1E-169 T 13-10-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 COP00_20550 962ed51e0478313ba3735d62c6950bac 448 Gene3D G3DSA:3.90.1150.10 10 441 1.0E-164 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 COP00_20550 962ed51e0478313ba3735d62c6950bac 448 Pfam PF00202 Aminotransferase class-III 22 440 2.9E-115 T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 COP00_16220 dcec6f281a7853c0b5552f3ee733dd54 399 Gene3D G3DSA:2.20.230.10 209 286 1.6E-18 T 13-10-2018 COP00_16220 dcec6f281a7853c0b5552f3ee733dd54 399 Gene3D G3DSA:2.40.40.10 311 392 4.7E-5 T 13-10-2018 IPR036908 RlpA-like domain superfamily COP00_16220 dcec6f281a7853c0b5552f3ee733dd54 399 Pfam PF06725 3D domain 338 399 5.9E-21 T 13-10-2018 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 COP00_16220 dcec6f281a7853c0b5552f3ee733dd54 399 Pfam PF03990 Domain of unknown function (DUF348) 40 78 1.9E-11 T 13-10-2018 IPR007137 Resuscitation-promoting factor, domain of unknown function DUF348 COP00_16220 dcec6f281a7853c0b5552f3ee733dd54 399 Pfam PF03990 Domain of unknown function (DUF348) 97 137 5.2E-14 T 13-10-2018 IPR007137 Resuscitation-promoting factor, domain of unknown function DUF348 COP00_16220 dcec6f281a7853c0b5552f3ee733dd54 399 Pfam PF03990 Domain of unknown function (DUF348) 154 194 6.0E-11 T 13-10-2018 IPR007137 Resuscitation-promoting factor, domain of unknown function DUF348 COP00_16220 dcec6f281a7853c0b5552f3ee733dd54 399 SUPERFAMILY SSF50685 340 388 7.67E-9 T 13-10-2018 IPR036908 RlpA-like domain superfamily COP00_16220 dcec6f281a7853c0b5552f3ee733dd54 399 Pfam PF07501 G5 domain 213 285 4.6E-22 T 13-10-2018 IPR011098 G5 domain COP00_16220 dcec6f281a7853c0b5552f3ee733dd54 399 SMART SM01208 208 286 2.7E-29 T 13-10-2018 IPR011098 G5 domain COP00_05735 00b0d89324a4268d06b1ae7a2701d89d 436 SUPERFAMILY SSF52540 5 167 7.11E-46 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_05735 00b0d89324a4268d06b1ae7a2701d89d 436 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 3 125 2.7E-23 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 COP00_05735 00b0d89324a4268d06b1ae7a2701d89d 436 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 179 338 4.6E-25 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 COP00_05735 00b0d89324a4268d06b1ae7a2701d89d 436 PIRSF PIRSF006485 2 436 1.5E-175 T 13-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 COP00_05735 00b0d89324a4268d06b1ae7a2701d89d 436 Hamap MF_00195 GTPase Der [der]. 3 436 41.262 T 13-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 COP00_05735 00b0d89324a4268d06b1ae7a2701d89d 436 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 353 433 7.9E-36 T 13-10-2018 IPR032859 GTPase Der, C-terminal KH-domain-like COP00_05735 00b0d89324a4268d06b1ae7a2701d89d 436 Gene3D G3DSA:3.30.300.20 353 436 3.5E-37 T 13-10-2018 IPR015946 K homology domain-like, alpha/beta COP00_05735 00b0d89324a4268d06b1ae7a2701d89d 436 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 4 432 1.3E-180 T 13-10-2018 IPR016484 GTP-binding protein EngA GO:0005525 COP00_05735 00b0d89324a4268d06b1ae7a2701d89d 436 SUPERFAMILY SSF52540 138 434 7.02E-72 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_05735 00b0d89324a4268d06b1ae7a2701d89d 436 Gene3D G3DSA:3.40.50.300 169 352 9.4E-57 T 13-10-2018 COP00_05735 00b0d89324a4268d06b1ae7a2701d89d 436 Gene3D G3DSA:3.40.50.300 1 163 6.0E-48 T 13-10-2018 COP00_05735 00b0d89324a4268d06b1ae7a2701d89d 436 Pfam PF01926 50S ribosome-binding GTPase 178 295 2.2E-26 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 COP00_05735 00b0d89324a4268d06b1ae7a2701d89d 436 Pfam PF01926 50S ribosome-binding GTPase 6 120 1.1E-25 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 COP00_22090 4099e1422f85aacefbdf41cb34bc38e5 408 Pfam PF00149 Calcineurin-like phosphoesterase 4 202 8.6E-15 T 13-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 COP00_22090 4099e1422f85aacefbdf41cb34bc38e5 408 SUPERFAMILY SSF56300 5 282 8.05E-55 T 13-10-2018 COP00_22090 4099e1422f85aacefbdf41cb34bc38e5 408 PIRSF PIRSF033091 2 408 1.1E-145 T 13-10-2018 IPR014576 Predicted phosphoesterase, YhaO type COP00_22090 4099e1422f85aacefbdf41cb34bc38e5 408 Gene3D G3DSA:3.60.21.10 2 251 8.6E-55 T 13-10-2018 IPR029052 Metallo-dependent phosphatase-like COP00_20860 1ffcd64b3ea46549f7a73bb08ae84819 350 Gene3D G3DSA:1.20.1420.30 57 341 6.5E-26 T 13-10-2018 COP00_20860 1ffcd64b3ea46549f7a73bb08ae84819 350 TIGRFAM TIGR00378 cax: calcium/proton exchanger 11 348 3.5E-153 T 13-10-2018 IPR004798 Calcium/proton exchanger CAX GO:0006816|GO:0015369 COP00_20860 1ffcd64b3ea46549f7a73bb08ae84819 350 TIGRFAM TIGR00846 caca2: calcium/proton exchanger 2 348 4.3E-123 T 13-10-2018 IPR004713 Calcium/proton exchanger GO:0006812|GO:0008324|GO:0016021|GO:0055085 COP00_20860 1ffcd64b3ea46549f7a73bb08ae84819 350 Gene3D G3DSA:1.20.58.1130 34 237 6.5E-26 T 13-10-2018 COP00_20860 1ffcd64b3ea46549f7a73bb08ae84819 350 Pfam PF01699 Sodium/calcium exchanger protein 26 178 8.5E-22 T 13-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 COP00_20860 1ffcd64b3ea46549f7a73bb08ae84819 350 Pfam PF01699 Sodium/calcium exchanger protein 206 342 5.6E-17 T 13-10-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 COP00_18520 f856bc0a333b22ad3e22a5024a115525 496 Pfam PF00854 POT family 95 463 7.0E-77 T 13-10-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-427975 COP00_18520 f856bc0a333b22ad3e22a5024a115525 496 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 15 492 6.0E-131 T 13-10-2018 IPR005279 Dipeptide/tripeptide permease GO:0015833|GO:0016020|GO:1904680 COP00_18520 f856bc0a333b22ad3e22a5024a115525 496 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 157 169 - T 13-10-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 COP00_18520 f856bc0a333b22ad3e22a5024a115525 496 Gene3D G3DSA:1.20.1250.20 2 496 2.8E-151 T 13-10-2018 COP00_18520 f856bc0a333b22ad3e22a5024a115525 496 ProSitePatterns PS01022 PTR2 family proton/oligopeptide symporters signature 1. 83 107 - T 13-10-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 COP00_18520 f856bc0a333b22ad3e22a5024a115525 496 SUPERFAMILY SSF103473 13 487 3.75E-36 T 13-10-2018 IPR036259 MFS transporter superfamily COP00_16775 1932661343874dd5d6fe07a8d40a521a 146 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 146 22.968 T 13-10-2018 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 COP00_16775 1932661343874dd5d6fe07a8d40a521a 146 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 144 9.5E-39 T 13-10-2018 IPR021131 Ribosomal protein L18e/L15P COP00_16775 1932661343874dd5d6fe07a8d40a521a 146 SUPERFAMILY SSF52080 4 143 2.62E-51 T 13-10-2018 IPR036227 Ribosomal L18e/L15P superfamily COP00_16775 1932661343874dd5d6fe07a8d40a521a 146 ProSitePatterns PS00475 Ribosomal protein L15 signature. 110 140 - T 13-10-2018 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 COP00_16775 1932661343874dd5d6fe07a8d40a521a 146 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 143 2.0E-56 T 13-10-2018 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_16775 1932661343874dd5d6fe07a8d40a521a 146 Gene3D G3DSA:3.100.10.10 66 146 2.4E-28 T 13-10-2018 COP00_22135 457c109f22f19d8257b1127f174e5bfe 115 ProDom PD073069 YHAI 3D-STRUCTURE 10 101 1.0E-28 T 13-10-2018 IPR015058 Protein of unknown function DUF1878 COP00_22135 457c109f22f19d8257b1127f174e5bfe 115 SUPERFAMILY SSF109915 2 112 4.58E-50 T 13-10-2018 IPR035945 YhaI-like superfamily COP00_22135 457c109f22f19d8257b1127f174e5bfe 115 Gene3D G3DSA:1.10.3750.10 1 114 1.5E-41 T 13-10-2018 IPR035945 YhaI-like superfamily COP00_22135 457c109f22f19d8257b1127f174e5bfe 115 Pfam PF08963 Protein of unknown function (DUF1878) 1 110 6.9E-46 T 13-10-2018 IPR015058 Protein of unknown function DUF1878 COP00_13430 378807352e8277f85ad474b60ba58efa 255 Pfam PF08241 Methyltransferase domain 44 140 8.6E-28 T 13-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 COP00_13430 378807352e8277f85ad474b60ba58efa 255 Gene3D G3DSA:3.40.50.150 22 255 6.9E-69 T 13-10-2018 COP00_13430 378807352e8277f85ad474b60ba58efa 255 SUPERFAMILY SSF53335 28 204 4.97E-46 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase COP00_00630 9e0a0bf2a6b48a789e25d596554d2c5b 170 Pfam PF01047 MarR family 50 108 2.3E-15 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 COP00_00630 9e0a0bf2a6b48a789e25d596554d2c5b 170 SMART SM00347 43 146 2.6E-22 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 COP00_00630 9e0a0bf2a6b48a789e25d596554d2c5b 170 SUPERFAMILY SSF46785 33 156 8.13E-22 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_00630 9e0a0bf2a6b48a789e25d596554d2c5b 170 Gene3D G3DSA:1.10.10.10 4 159 2.7E-24 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_17985 29b18c7a8c6ee7e933e98a5c06db1e82 186 Pfam PF03551 Transcriptional regulator PadR-like family 11 84 6.9E-17 T 13-10-2018 IPR005149 Transcription regulator PadR, N-terminal COP00_17985 29b18c7a8c6ee7e933e98a5c06db1e82 186 Gene3D G3DSA:1.10.10.10 6 93 2.6E-26 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_17985 29b18c7a8c6ee7e933e98a5c06db1e82 186 SUPERFAMILY SSF46785 7 180 1.04E-38 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_17985 29b18c7a8c6ee7e933e98a5c06db1e82 186 Pfam PF10400 Virulence activator alpha C-term 98 179 2.5E-18 T 13-10-2018 IPR018309 Transcription regulator PadR, C-terminal COP00_09395 ee047678ff529f593b3d7bbdbf2e9856 1000 Pfam PF01580 FtsK/SpoIIIE family 775 827 3.1E-16 T 13-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 COP00_09395 ee047678ff529f593b3d7bbdbf2e9856 1000 Pfam PF01580 FtsK/SpoIIIE family 636 774 3.1E-52 T 13-10-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 COP00_09395 ee047678ff529f593b3d7bbdbf2e9856 1000 Gene3D G3DSA:1.10.10.10 926 988 2.6E-26 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_09395 ee047678ff529f593b3d7bbdbf2e9856 1000 SMART SM00382 671 848 5.3E-4 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_09395 ee047678ff529f593b3d7bbdbf2e9856 1000 SUPERFAMILY SSF52540 609 899 2.48E-49 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_09395 ee047678ff529f593b3d7bbdbf2e9856 1000 SMART SM00843 922 987 3.3E-37 T 13-10-2018 IPR018541 FtsK gamma domain COP00_09395 ee047678ff529f593b3d7bbdbf2e9856 1000 Gene3D G3DSA:3.30.980.40 529 632 1.0E-35 T 13-10-2018 COP00_09395 ee047678ff529f593b3d7bbdbf2e9856 1000 Gene3D G3DSA:3.40.50.300 633 912 1.3E-114 T 13-10-2018 COP00_09395 ee047678ff529f593b3d7bbdbf2e9856 1000 Pfam PF09397 Ftsk gamma domain 925 985 1.7E-28 T 13-10-2018 IPR018541 FtsK gamma domain COP00_09395 ee047678ff529f593b3d7bbdbf2e9856 1000 SUPERFAMILY SSF46785 924 988 4.19E-22 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_08500 868559f672260c2375202ec10b040215 432 SUPERFAMILY SSF53244 301 431 2.75E-24 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 COP00_08500 868559f672260c2375202ec10b040215 432 PIRSF PIRSF001563 1 432 1.1E-151 T 13-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 COP00_08500 868559f672260c2375202ec10b040215 432 TIGRFAM TIGR01499 folC: bifunctional protein FolC 24 428 7.7E-127 T 13-10-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 COP00_08500 868559f672260c2375202ec10b040215 432 Gene3D G3DSA:3.90.190.20 301 432 4.2E-28 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 COP00_08500 868559f672260c2375202ec10b040215 432 ProSitePatterns PS01011 Folylpolyglutamate synthase signature 1. 44 67 - T 13-10-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 COP00_08500 868559f672260c2375202ec10b040215 432 Pfam PF08245 Mur ligase middle domain 46 274 4.1E-17 T 13-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 COP00_08500 868559f672260c2375202ec10b040215 432 Pfam PF02875 Mur ligase family, glutamate ligase domain 299 378 1.1E-7 T 13-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 COP00_08500 868559f672260c2375202ec10b040215 432 ProSitePatterns PS01012 Folylpolyglutamate synthase signature 2. 143 158 - T 13-10-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 COP00_08500 868559f672260c2375202ec10b040215 432 Gene3D G3DSA:3.40.1190.10 3 300 3.0E-102 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 COP00_08500 868559f672260c2375202ec10b040215 432 SUPERFAMILY SSF53623 4 299 2.75E-94 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 COP00_06845 d1358d2ab90d7da97c64f5a3c0811ea5 104 SUPERFAMILY SSF89957 1 103 3.27E-32 T 13-10-2018 IPR029756 MTH1187/YkoF-like COP00_06845 d1358d2ab90d7da97c64f5a3c0811ea5 104 Gene3D G3DSA:3.30.70.930 1 104 7.3E-40 T 13-10-2018 IPR029756 MTH1187/YkoF-like COP00_06845 d1358d2ab90d7da97c64f5a3c0811ea5 104 Pfam PF01910 Thiamine-binding protein 4 99 9.1E-35 T 13-10-2018 IPR002767 Thiamine-binding protein COP00_06845 d1358d2ab90d7da97c64f5a3c0811ea5 104 TIGRFAM TIGR00106 TIGR00106: uncharacterized protein, MTH1187 family 2 101 1.3E-37 T 13-10-2018 IPR002767 Thiamine-binding protein COP00_20065 9e75fb5ca81e2c4e65ee271d63371c64 566 SUPERFAMILY SSF51011 483 559 4.51E-20 T 13-10-2018 COP00_20065 9e75fb5ca81e2c4e65ee271d63371c64 566 Pfam PF16657 Maltogenic Amylase, C-terminal domain 483 554 2.4E-10 T 13-10-2018 IPR032091 Maltogenic Amylase, C-terminal COP00_20065 9e75fb5ca81e2c4e65ee271d63371c64 566 SMART SM00642 12 422 1.2E-154 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 COP00_20065 9e75fb5ca81e2c4e65ee271d63371c64 566 Gene3D G3DSA:2.60.40.1180 484 560 1.7E-22 T 13-10-2018 IPR013780 Glycosyl hydrolase, all-beta COP00_20065 9e75fb5ca81e2c4e65ee271d63371c64 566 Gene3D G3DSA:3.90.400.10 104 174 6.5E-211 T 13-10-2018 COP00_20065 9e75fb5ca81e2c4e65ee271d63371c64 566 SUPERFAMILY SSF51445 3 480 1.9E-160 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily COP00_20065 9e75fb5ca81e2c4e65ee271d63371c64 566 Gene3D G3DSA:3.20.20.80 4 476 6.5E-211 T 13-10-2018 COP00_20065 9e75fb5ca81e2c4e65ee271d63371c64 566 Pfam PF00128 Alpha amylase, catalytic domain 27 379 1.9E-134 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 COP00_11490 37e298bdbdaa053fd88c3c8ddfb4087c 406 SUPERFAMILY SSF51658 42 381 7.59E-91 T 13-10-2018 IPR036237 Xylose isomerase-like superfamily COP00_11490 37e298bdbdaa053fd88c3c8ddfb4087c 406 TIGRFAM TIGR02635 RhaI_grampos: L-rhamnose isomerase 22 400 8.1E-206 T 13-10-2018 IPR013457 Rhamnose isomerase-related COP00_11490 37e298bdbdaa053fd88c3c8ddfb4087c 406 Gene3D G3DSA:3.20.20.150 2 400 1.7E-133 T 13-10-2018 COP00_03290 d08f214012f36215887ba00c3be25bab 102 Gene3D G3DSA:2.40.10.270 2 102 2.0E-19 T 13-10-2018 IPR038666 Bacteriophage SPP1, head-tail adaptor superfamily COP00_03290 d08f214012f36215887ba00c3be25bab 102 TIGRFAM TIGR01563 gp16_SPP1: putative phage head-tail adaptor 4 96 2.4E-17 T 13-10-2018 IPR008767 Bacteriophage SPP1, head-tail adaptor COP00_03290 d08f214012f36215887ba00c3be25bab 102 Pfam PF05521 Phage head-tail joining protein 6 98 4.2E-23 T 13-10-2018 IPR008767 Bacteriophage SPP1, head-tail adaptor COP00_18390 d87d30eb3dffefda2a46fc281fbcc5d5 172 Pfam PF00583 Acetyltransferase (GNAT) family 34 147 9.5E-19 T 13-10-2018 IPR000182 GNAT domain COP00_18390 d87d30eb3dffefda2a46fc281fbcc5d5 172 SUPERFAMILY SSF55729 1 161 2.53E-35 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase COP00_18390 d87d30eb3dffefda2a46fc281fbcc5d5 172 Gene3D G3DSA:3.40.630.30 1 171 1.5E-52 T 13-10-2018 COP00_09455 71ac66b208d116944d3fd1268c3ee6b9 306 Gene3D G3DSA:3.40.50.10330 1 131 1.7E-28 T 13-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 COP00_09455 71ac66b208d116944d3fd1268c3ee6b9 306 TIGRFAM TIGR00147 TIGR00147: lipid kinase, YegS/Rv2252/BmrU family 1 305 1.3E-80 T 13-10-2018 IPR005218 Diacylglycerol/lipid kinase COP00_09455 71ac66b208d116944d3fd1268c3ee6b9 306 Gene3D G3DSA:2.60.200.40 135 297 4.5E-34 T 13-10-2018 COP00_09455 71ac66b208d116944d3fd1268c3ee6b9 306 Pfam PF00781 Diacylglycerol kinase catalytic domain 4 128 1.7E-28 T 13-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 COP00_09455 71ac66b208d116944d3fd1268c3ee6b9 306 SMART SM00046 3 130 5.3E-5 T 13-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 COP00_09455 71ac66b208d116944d3fd1268c3ee6b9 306 SUPERFAMILY SSF111331 2 304 2.62E-59 T 13-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily COP00_21690 722bc3cf0e21771f77008ba1ce0bce69 555 Gene3D G3DSA:3.30.9.10 104 345 1.1E-138 T 13-10-2018 COP00_21690 722bc3cf0e21771f77008ba1ce0bce69 555 ProSitePatterns PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2. 373 383 - T 13-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 COP00_21690 722bc3cf0e21771f77008ba1ce0bce69 555 SUPERFAMILY SSF54373 251 344 5.1E-12 T 13-10-2018 COP00_21690 722bc3cf0e21771f77008ba1ce0bce69 555 SUPERFAMILY SSF51905 17 396 9.07E-36 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily COP00_21690 722bc3cf0e21771f77008ba1ce0bce69 555 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 22 34 8.0E-31 T 13-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 COP00_21690 722bc3cf0e21771f77008ba1ce0bce69 555 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 35 45 8.0E-31 T 13-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 COP00_21690 722bc3cf0e21771f77008ba1ce0bce69 555 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 368 380 8.0E-31 T 13-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 COP00_21690 722bc3cf0e21771f77008ba1ce0bce69 555 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 96 108 8.0E-31 T 13-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 COP00_21690 722bc3cf0e21771f77008ba1ce0bce69 555 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 51 63 8.0E-31 T 13-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 COP00_21690 722bc3cf0e21771f77008ba1ce0bce69 555 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 338 344 8.0E-31 T 13-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 COP00_21690 722bc3cf0e21771f77008ba1ce0bce69 555 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 27 44 - T 13-10-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 COP00_21690 722bc3cf0e21771f77008ba1ce0bce69 555 Gene3D G3DSA:1.10.8.870 421 553 4.9E-41 T 13-10-2018 IPR038299 Alpha-glycerophosphate oxidase, C-terminal domain superfamily KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 COP00_21690 722bc3cf0e21771f77008ba1ce0bce69 555 Gene3D G3DSA:3.50.50.60 20 381 1.1E-138 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily COP00_21690 722bc3cf0e21771f77008ba1ce0bce69 555 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 405 533 1.6E-25 T 13-10-2018 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-1483166|Reactome: R-HSA-163560 COP00_21690 722bc3cf0e21771f77008ba1ce0bce69 555 Pfam PF01266 FAD dependent oxidoreductase 23 352 1.5E-54 T 13-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 COP00_08400 35662ca4fa1c67aebe2fa2f3f05d12c4 283 Gene3D G3DSA:3.40.190.10 5 180 1.5E-52 T 13-10-2018 COP00_08400 35662ca4fa1c67aebe2fa2f3f05d12c4 283 Pfam PF00800 Prephenate dehydratase 3 183 2.1E-55 T 13-10-2018 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 COP00_08400 35662ca4fa1c67aebe2fa2f3f05d12c4 283 SUPERFAMILY SSF55021 192 279 3.88E-24 T 13-10-2018 COP00_08400 35662ca4fa1c67aebe2fa2f3f05d12c4 283 ProSitePatterns PS00858 Prephenate dehydratase signature 2. 228 235 - T 13-10-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 COP00_08400 35662ca4fa1c67aebe2fa2f3f05d12c4 283 SUPERFAMILY SSF53850 1 184 6.19E-51 T 13-10-2018 COP00_08400 35662ca4fa1c67aebe2fa2f3f05d12c4 283 PIRSF PIRSF001500 1 283 4.8E-69 T 13-10-2018 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 COP00_08400 35662ca4fa1c67aebe2fa2f3f05d12c4 283 Pfam PF01842 ACT domain 201 255 6.0E-8 T 13-10-2018 IPR002912 ACT domain COP00_08400 35662ca4fa1c67aebe2fa2f3f05d12c4 283 Gene3D G3DSA:3.30.70.260 194 283 1.4E-25 T 13-10-2018 COP00_08400 35662ca4fa1c67aebe2fa2f3f05d12c4 283 Gene3D G3DSA:3.40.190.10 83 172 1.5E-52 T 13-10-2018 COP00_08400 35662ca4fa1c67aebe2fa2f3f05d12c4 283 ProSitePatterns PS00857 Prephenate dehydratase signature 1. 158 180 - T 13-10-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 COP00_22865 8f966bc1e92bd792b735780d62f6f246 307 Gene3D G3DSA:3.40.50.300 3 305 2.3E-94 T 13-10-2018 COP00_22865 8f966bc1e92bd792b735780d62f6f246 307 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 230 280 4.1E-8 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 COP00_22865 8f966bc1e92bd792b735780d62f6f246 307 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 COP00_22865 8f966bc1e92bd792b735780d62f6f246 307 SMART SM00382 34 228 3.1E-12 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_22865 8f966bc1e92bd792b735780d62f6f246 307 Pfam PF00005 ABC transporter 26 178 2.9E-33 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 COP00_22865 8f966bc1e92bd792b735780d62f6f246 307 SUPERFAMILY SSF52540 5 250 1.25E-76 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_14940 1612a2fc9d6b50873428cf12834b38ca 244 Pfam PF12730 ABC-2 family transporter protein 5 182 4.6E-22 T 13-10-2018 IPR032688 ABC-2 family transporter protein GO:0055085 COP00_14750 ed71ab419db4b59c3c44ff3fba725176 291 SUPERFAMILY SSF56112 21 288 2.62E-41 T 13-10-2018 IPR011009 Protein kinase-like domain superfamily COP00_14750 ed71ab419db4b59c3c44ff3fba725176 291 PIRSF PIRSF006221 4 291 2.4E-70 T 13-10-2018 IPR016477 Fructosamine/Ketosamine-3-kinase Reactome: R-HSA-163841 COP00_14750 ed71ab419db4b59c3c44ff3fba725176 291 Gene3D G3DSA:1.20.1270.240 128 278 4.3E-48 T 13-10-2018 COP00_14750 ed71ab419db4b59c3c44ff3fba725176 291 Gene3D G3DSA:3.30.200.20 7 97 8.7E-15 T 13-10-2018 COP00_14750 ed71ab419db4b59c3c44ff3fba725176 291 Pfam PF03881 Fructosamine kinase 11 290 1.1E-67 T 13-10-2018 IPR016477 Fructosamine/Ketosamine-3-kinase Reactome: R-HSA-163841 COP00_14750 ed71ab419db4b59c3c44ff3fba725176 291 Gene3D G3DSA:1.10.510.10 107 254 4.3E-48 T 13-10-2018 COP00_19545 41343a6335a22c8e8e00f968b6305d28 66 Pfam PF12728 Helix-turn-helix domain 11 58 4.1E-11 T 13-10-2018 COP00_19545 41343a6335a22c8e8e00f968b6305d28 66 Gene3D G3DSA:1.10.1660.10 5 60 2.2E-6 T 13-10-2018 COP00_19545 41343a6335a22c8e8e00f968b6305d28 66 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 11 58 3.8E-10 T 13-10-2018 IPR010093 SinI-like, DNA-binding domain GO:0003677 COP00_19545 41343a6335a22c8e8e00f968b6305d28 66 SUPERFAMILY SSF46955 10 59 9.89E-7 T 13-10-2018 IPR009061 Putative DNA-binding domain superfamily COP00_01060 5fcfd307626242f8c2702fab879e108c 257 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 3 215 5.6E-51 T 13-10-2018 IPR000878 Tetrapyrrole methylase GO:0008168 Reactome: R-HSA-5358493 COP00_01060 5fcfd307626242f8c2702fab879e108c 257 SUPERFAMILY SSF53790 1 245 4.32E-84 T 13-10-2018 IPR035996 Tetrapyrrole methylase superfamily GO:0008168 Reactome: R-HSA-5358493 COP00_01060 5fcfd307626242f8c2702fab879e108c 257 Gene3D G3DSA:3.40.1010.10 1 117 2.5E-47 T 13-10-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008168 Reactome: R-HSA-5358493 COP00_01060 5fcfd307626242f8c2702fab879e108c 257 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 2 238 3.2E-102 T 13-10-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0008168|GO:0019354 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 COP00_01060 5fcfd307626242f8c2702fab879e108c 257 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 7 21 - T 13-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 COP00_01060 5fcfd307626242f8c2702fab879e108c 257 Gene3D G3DSA:3.30.950.10 118 256 1.3E-45 T 13-10-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008168 Reactome: R-HSA-5358493 COP00_01060 5fcfd307626242f8c2702fab879e108c 257 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 82 115 - T 13-10-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 COP00_08335 acc775688dc97348af7e3e51c8cd0e82 59 ProDom PD052450 H SPORE ACID-SOLUBLE SMALL SASP SPORULATION SMALL PROTEIN-RELATED SOLUBLE RBL04815 1 59 2.0E-24 T 13-10-2018 IPR012610 Small acid-soluble spore protein, SspH GO:0030436|GO:0042601 COP00_08335 acc775688dc97348af7e3e51c8cd0e82 59 Pfam PF08141 Small acid-soluble spore protein H family 1 58 3.1E-28 T 13-10-2018 IPR012610 Small acid-soluble spore protein, SspH GO:0030436|GO:0042601 COP00_08335 acc775688dc97348af7e3e51c8cd0e82 59 TIGRFAM TIGR02861 SASP_H: small acid-soluble spore protein, H-type 1 58 2.2E-28 T 13-10-2018 IPR012610 Small acid-soluble spore protein, SspH GO:0030436|GO:0042601 COP00_08335 acc775688dc97348af7e3e51c8cd0e82 59 Hamap MF_00667 Small, acid-soluble spore protein H [sspH]. 1 59 21.979 T 13-10-2018 IPR012610 Small acid-soluble spore protein, SspH GO:0030436|GO:0042601 COP00_10500 dfa7d82899c70bdd5bc6ed9036a6a4f7 56 Pfam PF05952 Bacillus competence pheromone ComX 2 49 1.8E-14 T 13-10-2018 IPR009233 Competence pheromone ComX, Bacillus COP00_11210 11b08afe7ca5fb5b208955ca30c9b5d0 335 Pfam PF13439 Glycosyltransferase Family 4 9 113 9.4E-11 T 13-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 COP00_11210 11b08afe7ca5fb5b208955ca30c9b5d0 335 Pfam PF00534 Glycosyl transferases group 1 123 285 3.4E-36 T 13-10-2018 IPR001296 Glycosyl transferase, family 1 COP00_11210 11b08afe7ca5fb5b208955ca30c9b5d0 335 Gene3D G3DSA:3.40.50.2000 11 306 1.0E-67 T 13-10-2018 COP00_11210 11b08afe7ca5fb5b208955ca30c9b5d0 335 SUPERFAMILY SSF53756 7 310 1.77E-67 T 13-10-2018 COP00_11210 11b08afe7ca5fb5b208955ca30c9b5d0 335 Gene3D G3DSA:3.40.50.2000 113 293 1.0E-67 T 13-10-2018 COP00_05860 2f314c1a8897961e6194fafa3951d0fd 303 Gene3D G3DSA:3.10.350.10 253 302 7.8E-16 T 13-10-2018 IPR036779 LysM domain superfamily COP00_05860 2f314c1a8897961e6194fafa3951d0fd 303 SUPERFAMILY SSF54106 204 246 3.01E-9 T 13-10-2018 COP00_05860 2f314c1a8897961e6194fafa3951d0fd 303 SMART SM00257 204 247 1.5E-11 T 13-10-2018 IPR018392 LysM domain COP00_05860 2f314c1a8897961e6194fafa3951d0fd 303 SMART SM00257 255 298 3.7E-12 T 13-10-2018 IPR018392 LysM domain COP00_05860 2f314c1a8897961e6194fafa3951d0fd 303 SUPERFAMILY SSF51261 51 179 4.58E-46 T 13-10-2018 IPR011055 Duplicated hybrid motif COP00_05860 2f314c1a8897961e6194fafa3951d0fd 303 Pfam PF01476 LysM domain 205 246 4.6E-14 T 13-10-2018 IPR018392 LysM domain COP00_05860 2f314c1a8897961e6194fafa3951d0fd 303 Pfam PF01476 LysM domain 256 297 3.6E-12 T 13-10-2018 IPR018392 LysM domain COP00_05860 2f314c1a8897961e6194fafa3951d0fd 303 Gene3D G3DSA:3.10.350.10 190 252 2.4E-12 T 13-10-2018 IPR036779 LysM domain superfamily COP00_05860 2f314c1a8897961e6194fafa3951d0fd 303 Gene3D G3DSA:2.70.70.10 48 182 3.1E-40 T 13-10-2018 IPR011055 Duplicated hybrid motif COP00_05860 2f314c1a8897961e6194fafa3951d0fd 303 SUPERFAMILY SSF54106 253 298 6.8E-11 T 13-10-2018 COP00_05860 2f314c1a8897961e6194fafa3951d0fd 303 Pfam PF01551 Peptidase family M23 78 172 4.6E-31 T 13-10-2018 IPR016047 Peptidase M23 COP00_15040 24af740015b68aa277ada846280221ab 398 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 8 80 4.7E-18 T 13-10-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 COP00_15040 24af740015b68aa277ada846280221ab 398 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 4 396 1.8E-135 T 13-10-2018 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: R-HSA-83936 COP00_15040 24af740015b68aa277ada846280221ab 398 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 192 396 1.2E-52 T 13-10-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 COP00_03690 5ee215e8658421f89df2e328afb16e42 198 Pfam PF02660 Glycerol-3-phosphate acyltransferase 9 182 4.4E-54 T 13-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 COP00_03690 5ee215e8658421f89df2e328afb16e42 198 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 1 192 8.7E-72 T 13-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 COP00_03690 5ee215e8658421f89df2e328afb16e42 198 SMART SM01207 8 183 3.4E-83 T 13-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 COP00_03690 5ee215e8658421f89df2e328afb16e42 198 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 5 191 20.698 T 13-10-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 COP00_22400 810299ac90042300560e65b2f74eb2c7 432 SUPERFAMILY SSF51735 2 167 3.95E-54 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily COP00_22400 810299ac90042300560e65b2f74eb2c7 432 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 194 404 4.9E-66 T 13-10-2018 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 COP00_22400 810299ac90042300560e65b2f74eb2c7 432 PRINTS PR00732 Glycosyl hydrolase family 4 signature 164 175 4.5E-40 T 13-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 COP00_22400 810299ac90042300560e65b2f74eb2c7 432 PRINTS PR00732 Glycosyl hydrolase family 4 signature 94 107 4.5E-40 T 13-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 COP00_22400 810299ac90042300560e65b2f74eb2c7 432 PRINTS PR00732 Glycosyl hydrolase family 4 signature 190 202 4.5E-40 T 13-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 COP00_22400 810299ac90042300560e65b2f74eb2c7 432 PRINTS PR00732 Glycosyl hydrolase family 4 signature 72 88 4.5E-40 T 13-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 COP00_22400 810299ac90042300560e65b2f74eb2c7 432 PRINTS PR00732 Glycosyl hydrolase family 4 signature 3 18 4.5E-40 T 13-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 COP00_22400 810299ac90042300560e65b2f74eb2c7 432 PRINTS PR00732 Glycosyl hydrolase family 4 signature 139 156 4.5E-40 T 13-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 COP00_22400 810299ac90042300560e65b2f74eb2c7 432 PRINTS PR00732 Glycosyl hydrolase family 4 signature 110 130 4.5E-40 T 13-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 COP00_22400 810299ac90042300560e65b2f74eb2c7 432 ProSitePatterns PS01324 Glycosyl hydrolases family 4 signature. 139 169 - T 13-10-2018 IPR019802 Glycoside hydrolase, family 4, conserved site GO:0004553|GO:0005975 COP00_22400 810299ac90042300560e65b2f74eb2c7 432 Pfam PF02056 Family 4 glycosyl hydrolase 3 184 3.6E-68 T 13-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 COP00_22400 810299ac90042300560e65b2f74eb2c7 432 Gene3D G3DSA:3.90.1820.20 1 427 1.1E-145 T 13-10-2018 COP00_22400 810299ac90042300560e65b2f74eb2c7 432 SUPERFAMILY SSF56327 168 431 2.85E-74 T 13-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 COP00_15830 ab7f2d89e2f19e35d654e978907c33a4 481 Pfam PF01740 STAS domain 398 468 4.8E-6 T 13-10-2018 IPR002645 STAS domain COP00_15830 ab7f2d89e2f19e35d654e978907c33a4 481 Gene3D G3DSA:3.30.750.24 381 479 1.6E-26 T 13-10-2018 IPR036513 STAS domain superfamily COP00_15830 ab7f2d89e2f19e35d654e978907c33a4 481 SUPERFAMILY SSF52091 387 475 2.75E-11 T 13-10-2018 IPR036513 STAS domain superfamily COP00_15830 ab7f2d89e2f19e35d654e978907c33a4 481 ProSitePatterns PS01130 SLC26A transporters signature. 43 64 - T 13-10-2018 IPR018045 Sulphate anion transporter, conserved site GO:0008271|GO:0008272 Reactome: R-HSA-427601 COP00_15830 ab7f2d89e2f19e35d654e978907c33a4 481 Pfam PF00916 Sulfate permease family 149 355 2.2E-33 T 13-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 COP00_15830 ab7f2d89e2f19e35d654e978907c33a4 481 Pfam PF00916 Sulfate permease family 15 144 4.6E-29 T 13-10-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 COP00_05670 de165befc7b05f3901a04bdf921c8f73 255 Gene3D G3DSA:3.40.50.150 66 255 2.6E-69 T 13-10-2018 COP00_05670 de165befc7b05f3901a04bdf921c8f73 255 Pfam PF01739 CheR methyltransferase, SAM binding domain 67 245 1.6E-63 T 13-10-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal COP00_05670 de165befc7b05f3901a04bdf921c8f73 255 SUPERFAMILY SSF53335 67 246 1.6E-50 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase COP00_05670 de165befc7b05f3901a04bdf921c8f73 255 PRINTS PR00996 Glutamate methyltransferase family signature 213 236 3.5E-41 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 COP00_05670 de165befc7b05f3901a04bdf921c8f73 255 PRINTS PR00996 Glutamate methyltransferase family signature 128 144 3.5E-41 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 COP00_05670 de165befc7b05f3901a04bdf921c8f73 255 PRINTS PR00996 Glutamate methyltransferase family signature 96 116 3.5E-41 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 COP00_05670 de165befc7b05f3901a04bdf921c8f73 255 PRINTS PR00996 Glutamate methyltransferase family signature 194 208 3.5E-41 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 COP00_05670 de165befc7b05f3901a04bdf921c8f73 255 PRINTS PR00996 Glutamate methyltransferase family signature 23 36 3.5E-41 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 COP00_05670 de165befc7b05f3901a04bdf921c8f73 255 PRINTS PR00996 Glutamate methyltransferase family signature 60 72 3.5E-41 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 COP00_05670 de165befc7b05f3901a04bdf921c8f73 255 Pfam PF03705 CheR methyltransferase, all-alpha domain 4 53 3.9E-10 T 13-10-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal COP00_05670 de165befc7b05f3901a04bdf921c8f73 255 SUPERFAMILY SSF47757 3 66 3.92E-12 T 13-10-2018 COP00_05670 de165befc7b05f3901a04bdf921c8f73 255 SMART SM00138 1 253 2.9E-112 T 13-10-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 COP00_05105 1eaec5f7eab22cfcb2d1938f6bc2dae0 230 SUPERFAMILY SSF100950 5 225 2.99E-70 T 13-10-2018 IPR037171 NagB/RpiA transferase-like COP00_05105 1eaec5f7eab22cfcb2d1938f6bc2dae0 230 Gene3D G3DSA:3.40.1080.10 4 221 2.4E-73 T 13-10-2018 COP00_05105 1eaec5f7eab22cfcb2d1938f6bc2dae0 230 Pfam PF01144 Coenzyme A transferase 9 218 1.7E-63 T 13-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 COP00_05105 1eaec5f7eab22cfcb2d1938f6bc2dae0 230 ProSitePatterns PS01273 Coenzyme A transferases signature 1. 19 34 - T 13-10-2018 IPR004163 Coenzyme A transferase binding site GO:0008410 Reactome: R-HSA-77108 COP00_05105 1eaec5f7eab22cfcb2d1938f6bc2dae0 230 SMART SM00882 7 219 2.4E-68 T 13-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 COP00_05105 1eaec5f7eab22cfcb2d1938f6bc2dae0 230 TIGRFAM TIGR02429 pcaI_scoA_fam: 3-oxoacid CoA-transferase, A subunit 6 220 8.4E-62 T 13-10-2018 IPR012792 3-oxoacid CoA-transferase, subunit A GO:0008410 Reactome: R-HSA-77108 COP00_15570 d21b0af16859e648d2a64f91493cce09 306 Gene3D G3DSA:3.40.50.1980 138 305 2.1E-54 T 13-10-2018 COP00_15570 d21b0af16859e648d2a64f91493cce09 306 Pfam PF01497 Periplasmic binding protein 64 279 2.2E-30 T 13-10-2018 IPR002491 ABC transporter periplasmic binding domain COP00_15570 d21b0af16859e648d2a64f91493cce09 306 Gene3D G3DSA:3.40.50.1980 49 137 7.5E-26 T 13-10-2018 COP00_15570 d21b0af16859e648d2a64f91493cce09 306 SUPERFAMILY SSF53807 37 300 3.26E-49 T 13-10-2018 COP00_18470 107fdfa1433e166e60751bc964e3eb44 587 SUPERFAMILY SSF55874 435 580 5.11E-21 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily COP00_18470 107fdfa1433e166e60751bc964e3eb44 587 SMART SM00387 470 582 7.8E-8 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase COP00_18470 107fdfa1433e166e60751bc964e3eb44 587 Gene3D G3DSA:3.30.450.20 174 287 3.8E-13 T 13-10-2018 COP00_18470 107fdfa1433e166e60751bc964e3eb44 587 SMART SM00304 316 368 3.0E-8 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 COP00_18470 107fdfa1433e166e60751bc964e3eb44 587 Gene3D G3DSA:1.20.1480.50 288 374 2.0E-11 T 13-10-2018 COP00_18470 107fdfa1433e166e60751bc964e3eb44 587 Pfam PF02743 Cache domain 43 278 2.0E-28 T 13-10-2018 IPR033479 Double Cache domain 1 COP00_18470 107fdfa1433e166e60751bc964e3eb44 587 Gene3D G3DSA:3.30.565.10 446 583 2.1E-20 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily COP00_18470 107fdfa1433e166e60751bc964e3eb44 587 SUPERFAMILY SSF158472 317 367 1.83E-8 T 13-10-2018 COP00_18470 107fdfa1433e166e60751bc964e3eb44 587 Pfam PF06580 Histidine kinase 380 459 2.6E-27 T 13-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 COP00_18470 107fdfa1433e166e60751bc964e3eb44 587 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 479 579 2.1E-9 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase COP00_18470 107fdfa1433e166e60751bc964e3eb44 587 Pfam PF00672 HAMP domain 316 363 8.7E-7 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 COP00_03675 e63acb9f23ed9d005cb8de5d9e509a0c 138 PIRSF PIRSF003230 2 137 2.9E-33 T 13-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 COP00_03675 e63acb9f23ed9d005cb8de5d9e509a0c 138 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 9 122 7.5E-39 T 13-10-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 COP00_03675 e63acb9f23ed9d005cb8de5d9e509a0c 138 Pfam PF03061 Thioesterase superfamily 18 102 4.1E-15 T 13-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 COP00_03675 e63acb9f23ed9d005cb8de5d9e509a0c 138 Gene3D G3DSA:3.10.129.10 3 131 1.0E-35 T 13-10-2018 COP00_03675 e63acb9f23ed9d005cb8de5d9e509a0c 138 SUPERFAMILY SSF54637 6 133 5.32E-40 T 13-10-2018 IPR029069 HotDog domain superfamily COP00_01170 3c2d9774d4718a93d4a98d3111861001 120 Pfam PF03780 Asp23 family, cell envelope-related function 9 116 1.8E-35 T 13-10-2018 IPR005531 Alkaline shock protein Asp23 COP00_21485 7796988d1e9217b54efe711d9528b935 631 PIRSF PIRSF000549 1 631 1.5E-268 T 13-10-2018 IPR016230 Serine-protein kinase, PrkA GO:0004672 COP00_21485 7796988d1e9217b54efe711d9528b935 631 SMART SM00763 21 371 1.5E-199 T 13-10-2018 IPR013153 PrkA AAA domain COP00_21485 7796988d1e9217b54efe711d9528b935 631 Pfam PF06798 PrkA serine protein kinase C-terminal domain 375 624 3.9E-94 T 13-10-2018 IPR010650 PrkA C-terminal domain COP00_21485 7796988d1e9217b54efe711d9528b935 631 SUPERFAMILY SSF52540 68 460 3.66E-11 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_21485 7796988d1e9217b54efe711d9528b935 631 Pfam PF08298 PrkA AAA domain 22 371 1.7E-154 T 13-10-2018 IPR013153 PrkA AAA domain COP00_08730 f0e9d6ad81320b31c8db3e360ca1031d 587 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 356 378 3.4E-9 T 13-10-2018 COP00_08730 f0e9d6ad81320b31c8db3e360ca1031d 587 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 3.4E-9 T 13-10-2018 COP00_08730 f0e9d6ad81320b31c8db3e360ca1031d 587 Gene3D G3DSA:3.50.50.60 6 403 7.1E-125 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily COP00_08730 f0e9d6ad81320b31c8db3e360ca1031d 587 Pfam PF02910 Fumarate reductase flavoprotein C-term 452 579 3.5E-41 T 13-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 COP00_08730 f0e9d6ad81320b31c8db3e360ca1031d 587 SUPERFAMILY SSF56425 231 353 6.88E-31 T 13-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 COP00_08730 f0e9d6ad81320b31c8db3e360ca1031d 587 TIGRFAM TIGR01811 sdhA_Bsu: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 6 579 2.0E-283 T 13-10-2018 IPR011280 Succinate dehydrogenase/fumarate reductase flavoprotein subunit, low-GC Gram-positive bacteria KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279 COP00_08730 f0e9d6ad81320b31c8db3e360ca1031d 587 Pfam PF00890 FAD binding domain 6 392 1.2E-87 T 13-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 COP00_08730 f0e9d6ad81320b31c8db3e360ca1031d 587 SUPERFAMILY SSF51905 6 425 5.11E-65 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily COP00_08730 f0e9d6ad81320b31c8db3e360ca1031d 587 Gene3D G3DSA:3.90.700.10 258 367 7.1E-125 T 13-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 COP00_08730 f0e9d6ad81320b31c8db3e360ca1031d 587 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 39 48 - T 13-10-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 COP00_08730 f0e9d6ad81320b31c8db3e360ca1031d 587 Gene3D G3DSA:1.20.58.100 423 539 4.6E-34 T 13-10-2018 COP00_08730 f0e9d6ad81320b31c8db3e360ca1031d 587 SUPERFAMILY SSF46977 443 579 1.31E-46 T 13-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 COP00_08730 f0e9d6ad81320b31c8db3e360ca1031d 587 PIRSF PIRSF000171 343 576 1.3E-14 T 13-10-2018 COP00_08730 f0e9d6ad81320b31c8db3e360ca1031d 587 PIRSF PIRSF000171 1 240 3.9E-21 T 13-10-2018 COP00_08730 f0e9d6ad81320b31c8db3e360ca1031d 587 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 396 411 1.8E-7 T 13-10-2018 COP00_08730 f0e9d6ad81320b31c8db3e360ca1031d 587 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 1.8E-7 T 13-10-2018 COP00_07945 ce3467a4d212876695032d886e5edf84 85 SUPERFAMILY SSF54909 4 82 6.43E-14 T 13-10-2018 IPR011008 Dimeric alpha-beta barrel COP00_07945 ce3467a4d212876695032d886e5edf84 85 Pfam PF03795 YCII-related domain 4 81 2.5E-11 T 13-10-2018 IPR005545 YCII-related COP00_06290 8d437daf91e53d54d4e7c0cc5988ebe7 410 SUPERFAMILY SSF103473 2 389 4.32E-57 T 13-10-2018 IPR036259 MFS transporter superfamily COP00_06290 8d437daf91e53d54d4e7c0cc5988ebe7 410 Gene3D G3DSA:1.20.1250.20 10 385 1.4E-52 T 13-10-2018 COP00_06290 8d437daf91e53d54d4e7c0cc5988ebe7 410 Pfam PF07690 Major Facilitator Superfamily 16 239 2.3E-28 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 COP00_06290 8d437daf91e53d54d4e7c0cc5988ebe7 410 ProSitePatterns PS00216 Sugar transport proteins signature 1. 66 82 - T 13-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 COP00_06290 8d437daf91e53d54d4e7c0cc5988ebe7 410 PRINTS PR01035 Tetracycline resistance protein signature 165 185 1.1E-6 T 13-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 COP00_06290 8d437daf91e53d54d4e7c0cc5988ebe7 410 PRINTS PR01035 Tetracycline resistance protein signature 21 37 1.1E-6 T 13-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 COP00_06290 8d437daf91e53d54d4e7c0cc5988ebe7 410 PRINTS PR01035 Tetracycline resistance protein signature 79 103 1.1E-6 T 13-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 COP00_06290 8d437daf91e53d54d4e7c0cc5988ebe7 410 PRINTS PR01035 Tetracycline resistance protein signature 137 159 1.1E-6 T 13-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 COP00_16060 fa7ac2832a08375ad3e4e7164fa784aa 213 Pfam PF01712 Deoxynucleoside kinase 12 211 1.1E-63 T 13-10-2018 IPR031314 Deoxynucleoside kinase domain COP00_16060 fa7ac2832a08375ad3e4e7164fa784aa 213 Gene3D G3DSA:3.40.50.300 9 213 4.9E-55 T 13-10-2018 COP00_16060 fa7ac2832a08375ad3e4e7164fa784aa 213 PIRSF PIRSF000705 1 213 5.8E-65 T 13-10-2018 IPR002624 Deoxynucleoside kinase GO:0005524|GO:0006139|GO:0019206 COP00_16060 fa7ac2832a08375ad3e4e7164fa784aa 213 SUPERFAMILY SSF52540 10 209 9.92E-44 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_05130 b212ded4f1f31010c533bd8fd186270b 152 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 4 135 1.3E-65 T 13-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 COP00_05130 b212ded4f1f31010c533bd8fd186270b 152 Pfam PF01641 SelR domain 10 126 1.7E-48 T 13-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 COP00_05130 b212ded4f1f31010c533bd8fd186270b 152 SUPERFAMILY SSF51316 3 143 1.83E-61 T 13-10-2018 IPR011057 Mss4-like superfamily COP00_05130 b212ded4f1f31010c533bd8fd186270b 152 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 4 127 37.683 T 13-10-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 COP00_05130 b212ded4f1f31010c533bd8fd186270b 152 Gene3D G3DSA:2.170.150.20 1 144 2.7E-61 T 13-10-2018 COP00_12855 00fffb0c792816ed3563abaa949d7d2d 245 Pfam PF00977 Histidine biosynthesis protein 6 234 9.7E-77 T 13-10-2018 IPR006062 Histidine biosynthesis GO:0000105 COP00_12855 00fffb0c792816ed3563abaa949d7d2d 245 Gene3D G3DSA:3.20.20.70 1 243 2.6E-87 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 COP00_12855 00fffb0c792816ed3563abaa949d7d2d 245 SUPERFAMILY SSF51366 5 240 3.9E-69 T 13-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 COP00_12855 00fffb0c792816ed3563abaa949d7d2d 245 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 6 237 8.6E-86 T 13-10-2018 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 COP00_12855 00fffb0c792816ed3563abaa949d7d2d 245 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 5 241 36.513 T 13-10-2018 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 COP00_10830 4f1d58e480bf1f30ebc87bfacdb4f5f1 456 Gene3D G3DSA:3.60.21.10 1 278 1.3E-55 T 13-10-2018 IPR029052 Metallo-dependent phosphatase-like COP00_10830 4f1d58e480bf1f30ebc87bfacdb4f5f1 456 Gene3D G3DSA:3.90.780.10 281 450 1.5E-16 T 13-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 COP00_10830 4f1d58e480bf1f30ebc87bfacdb4f5f1 456 SUPERFAMILY SSF56300 4 277 8.78E-66 T 13-10-2018 COP00_10830 4f1d58e480bf1f30ebc87bfacdb4f5f1 456 Pfam PF02872 5'-nucleotidase, C-terminal domain 282 415 9.5E-15 T 13-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 COP00_10830 4f1d58e480bf1f30ebc87bfacdb4f5f1 456 PRINTS PR01607 Apyrase family signature 330 353 3.9E-18 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 COP00_10830 4f1d58e480bf1f30ebc87bfacdb4f5f1 456 PRINTS PR01607 Apyrase family signature 169 186 3.9E-18 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 COP00_10830 4f1d58e480bf1f30ebc87bfacdb4f5f1 456 PRINTS PR01607 Apyrase family signature 3 21 3.9E-18 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 COP00_10830 4f1d58e480bf1f30ebc87bfacdb4f5f1 456 PRINTS PR01607 Apyrase family signature 402 421 3.9E-18 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 COP00_10830 4f1d58e480bf1f30ebc87bfacdb4f5f1 456 PRINTS PR01607 Apyrase family signature 188 211 3.9E-18 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 COP00_10830 4f1d58e480bf1f30ebc87bfacdb4f5f1 456 PRINTS PR01607 Apyrase family signature 216 236 3.9E-18 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 COP00_10830 4f1d58e480bf1f30ebc87bfacdb4f5f1 456 PIRSF PIRSF036361 1 453 8.9E-183 T 13-10-2018 IPR011240 Phosphoesterase-related protein YunD COP00_10830 4f1d58e480bf1f30ebc87bfacdb4f5f1 456 SUPERFAMILY SSF55816 277 450 1.01E-27 T 13-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 COP00_10830 4f1d58e480bf1f30ebc87bfacdb4f5f1 456 Pfam PF00149 Calcineurin-like phosphoesterase 6 205 3.7E-10 T 13-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 COP00_24500 b4eba49968b14dfe18b24cf9cbbc9594 112 SMART SM00507 25 81 2.9E-10 T 13-10-2018 IPR003615 HNH nuclease COP00_24500 b4eba49968b14dfe18b24cf9cbbc9594 112 Pfam PF01844 HNH endonuclease 38 85 3.8E-11 T 13-10-2018 IPR002711 HNH endonuclease GO:0003676|GO:0004519 COP00_03715 808fc3dee152e3958c600d496f86b26c 536 Gene3D G3DSA:3.30.420.40 14 266 1.8E-38 T 13-10-2018 COP00_03715 808fc3dee152e3958c600d496f86b26c 536 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 279 477 4.5E-35 T 13-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 COP00_03715 808fc3dee152e3958c600d496f86b26c 536 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 19 264 2.4E-16 T 13-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 COP00_03715 808fc3dee152e3958c600d496f86b26c 536 SUPERFAMILY SSF53067 275 522 4.59E-14 T 13-10-2018 COP00_03715 808fc3dee152e3958c600d496f86b26c 536 SUPERFAMILY SSF53067 18 266 1.75E-32 T 13-10-2018 COP00_03715 808fc3dee152e3958c600d496f86b26c 536 Gene3D G3DSA:3.30.420.40 267 531 3.0E-20 T 13-10-2018 COP00_17160 76d48949c889b36d30b3160f52ded222 379 Gene3D G3DSA:3.40.1660.10 23 371 1.3E-38 T 13-10-2018 COP00_17160 76d48949c889b36d30b3160f52ded222 379 Gene3D G3DSA:1.20.1440.30 132 254 1.3E-38 T 13-10-2018 COP00_17160 76d48949c889b36d30b3160f52ded222 379 Pfam PF05139 Erythromycin esterase 60 371 3.9E-34 T 13-10-2018 IPR007815 Erythromycin esterase GO:0046677 COP00_17160 76d48949c889b36d30b3160f52ded222 379 Gene3D G3DSA:3.30.1870.10 62 131 1.3E-38 T 13-10-2018 COP00_17160 76d48949c889b36d30b3160f52ded222 379 SUPERFAMILY SSF159501 3 374 9.42E-67 T 13-10-2018 COP00_22720 1391481b845048c2ee7b7470e1458a3b 345 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 1 339 42.546 T 13-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 COP00_22720 1391481b845048c2ee7b7470e1458a3b 345 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 158 316 2.9E-31 T 13-10-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0005737|GO:0008652|GO:0016620|GO:0046983 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 COP00_22720 1391481b845048c2ee7b7470e1458a3b 345 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 2 141 2.4E-30 T 13-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 COP00_22720 1391481b845048c2ee7b7470e1458a3b 345 Gene3D G3DSA:3.30.360.10 147 313 7.7E-125 T 13-10-2018 COP00_22720 1391481b845048c2ee7b7470e1458a3b 345 SMART SM00859 2 141 2.6E-43 T 13-10-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 COP00_22720 1391481b845048c2ee7b7470e1458a3b 345 SUPERFAMILY SSF51735 2 176 1.24E-43 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily COP00_22720 1391481b845048c2ee7b7470e1458a3b 345 SUPERFAMILY SSF55347 149 313 1.61E-56 T 13-10-2018 COP00_22720 1391481b845048c2ee7b7470e1458a3b 345 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 144 160 - T 13-10-2018 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 COP00_22720 1391481b845048c2ee7b7470e1458a3b 345 Gene3D G3DSA:3.40.50.720 2 331 7.7E-125 T 13-10-2018 COP00_22720 1391481b845048c2ee7b7470e1458a3b 345 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 2 345 3.3E-135 T 13-10-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 COP00_12720 66cc10beae76e96f65035b8e95ed0c3d 328 SUPERFAMILY SSF56349 26 317 6.47E-53 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 COP00_12720 66cc10beae76e96f65035b8e95ed0c3d 328 Pfam PF00589 Phage integrase family 137 307 2.5E-33 T 13-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 COP00_12720 66cc10beae76e96f65035b8e95ed0c3d 328 Gene3D G3DSA:1.10.443.10 135 315 1.9E-41 T 13-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 COP00_12720 66cc10beae76e96f65035b8e95ed0c3d 328 Gene3D G3DSA:1.10.150.130 33 130 2.5E-10 T 13-10-2018 IPR010998 Integrase/recombinase, N-terminal COP00_12720 66cc10beae76e96f65035b8e95ed0c3d 328 Pfam PF13495 Phage integrase, N-terminal SAM-like domain 39 116 8.9E-10 T 13-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 COP00_03100 c639b372ba81698771628a8806e1e77e 200 SUPERFAMILY SSF52980 12 170 2.95E-19 T 13-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 COP00_03100 c639b372ba81698771628a8806e1e77e 200 Gene3D G3DSA:3.40.1350.10 11 173 7.2E-8 T 13-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 COP00_20605 36b845ea41df81b374819eed3936ec92 478 Pfam PF00939 Sodium:sulfate symporter transmembrane region 14 478 8.7E-174 T 13-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 COP00_20605 36b845ea41df81b374819eed3936ec92 478 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 32 472 5.0E-134 T 13-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 COP00_20605 36b845ea41df81b374819eed3936ec92 478 PIRSF PIRSF002457 2 478 3.0E-162 T 13-10-2018 IPR030676 Citrate carrier CitT-related COP00_14795 0e8507cd065ed5022d93f3de5f96c756 229 SMART SM00448 2 112 9.4E-36 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 COP00_14795 0e8507cd065ed5022d93f3de5f96c756 229 SUPERFAMILY SSF46894 127 226 1.67E-24 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 COP00_14795 0e8507cd065ed5022d93f3de5f96c756 229 Pfam PF00072 Response regulator receiver domain 4 112 3.9E-25 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 COP00_14795 0e8507cd065ed5022d93f3de5f96c756 229 Gene3D G3DSA:1.10.10.10 124 227 1.0E-24 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_14795 0e8507cd065ed5022d93f3de5f96c756 229 Gene3D G3DSA:3.40.50.2300 1 123 2.0E-33 T 13-10-2018 COP00_14795 0e8507cd065ed5022d93f3de5f96c756 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 154 225 2.0E-21 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 COP00_14795 0e8507cd065ed5022d93f3de5f96c756 229 SMART SM00862 150 225 4.0E-20 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 COP00_14795 0e8507cd065ed5022d93f3de5f96c756 229 SUPERFAMILY SSF52172 1 123 2.7E-36 T 13-10-2018 IPR011006 CheY-like superfamily COP00_18765 eb42e36929282cf5a3b03ad89d0b6ee3 477 Pfam PF02378 Phosphotransferase system, EIIC 22 280 4.6E-17 T 13-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 COP00_18765 eb42e36929282cf5a3b03ad89d0b6ee3 477 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 390 474 4.1E-14 T 13-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 COP00_18765 eb42e36929282cf5a3b03ad89d0b6ee3 477 TIGRFAM TIGR00851 mtlA: PTS system, mannitol-specific IIC component 12 350 5.0E-182 T 13-10-2018 IPR004718 Phosphotransferase system, mannitol-specific enzyme IIC GO:0008982|GO:0009401|GO:0016021 KEGG: 00051+2.7.1.197 COP00_18765 eb42e36929282cf5a3b03ad89d0b6ee3 477 SUPERFAMILY SSF52794 388 475 2.27E-28 T 13-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 COP00_18765 eb42e36929282cf5a3b03ad89d0b6ee3 477 Gene3D G3DSA:3.40.50.2300 376 477 4.9E-41 T 13-10-2018 COP00_11085 9a7ad67da184785e3efa3a55ca70eaeb 149 Pfam PF14039 YusW-like protein 50 139 1.4E-23 T 13-10-2018 IPR025623 YusW-like protein COP00_13285 3fe82c4f979eb747f87f112d3d411339 129 Pfam PF01467 Cytidylyltransferase-like 5 124 1.1E-22 T 13-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 COP00_13285 3fe82c4f979eb747f87f112d3d411339 129 Gene3D G3DSA:3.40.50.620 1 129 4.9E-44 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold COP00_13285 3fe82c4f979eb747f87f112d3d411339 129 SUPERFAMILY SSF52374 1 126 1.5E-35 T 13-10-2018 COP00_13285 3fe82c4f979eb747f87f112d3d411339 129 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 4 68 6.8E-22 T 13-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 COP00_13285 3fe82c4f979eb747f87f112d3d411339 129 TIGRFAM TIGR01518 g3p_cytidyltrns: glycerol-3-phosphate cytidylyltransferase 4 126 5.1E-70 T 13-10-2018 IPR006409 Glycerol-3-phosphate cytidylyltransferase GO:0005737|GO:0019350|GO:0046872|GO:0047348 KEGG: 00564+2.7.7.39|MetaCyc: PWY-7815|MetaCyc: PWY-7816|MetaCyc: PWY-7819 COP00_18780 5a919999995bd86ff6fcf43f63de7ee8 692 SUPERFAMILY SSF52794 414 495 1.46E-11 T 13-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 COP00_18780 5a919999995bd86ff6fcf43f63de7ee8 692 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 541 656 3.7E-11 T 13-10-2018 IPR002178 PTS EIIA type-2 domain COP00_18780 5a919999995bd86ff6fcf43f63de7ee8 692 Gene3D G3DSA:3.40.50.2300 414 499 2.4E-12 T 13-10-2018 COP00_18780 5a919999995bd86ff6fcf43f63de7ee8 692 Pfam PF00874 PRD domain 316 404 1.6E-20 T 13-10-2018 IPR011608 PRD domain GO:0006355 COP00_18780 5a919999995bd86ff6fcf43f63de7ee8 692 Pfam PF00874 PRD domain 206 294 2.2E-21 T 13-10-2018 IPR011608 PRD domain GO:0006355 COP00_18780 5a919999995bd86ff6fcf43f63de7ee8 692 Pfam PF05043 Mga helix-turn-helix domain 87 159 1.4E-5 T 13-10-2018 IPR007737 Mga helix-turn-helix domain COP00_18780 5a919999995bd86ff6fcf43f63de7ee8 692 Gene3D G3DSA:1.10.1790.10 201 297 4.2E-22 T 13-10-2018 COP00_18780 5a919999995bd86ff6fcf43f63de7ee8 692 Gene3D G3DSA:1.10.1790.10 311 406 5.3E-19 T 13-10-2018 COP00_18780 5a919999995bd86ff6fcf43f63de7ee8 692 Gene3D G3DSA:1.10.10.10 73 150 8.0E-6 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_18780 5a919999995bd86ff6fcf43f63de7ee8 692 Gene3D G3DSA:1.10.10.10 1 65 2.2E-7 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_18780 5a919999995bd86ff6fcf43f63de7ee8 692 Pfam PF08279 HTH domain 6 62 3.5E-8 T 13-10-2018 IPR013196 Helix-turn-helix, type 11 COP00_18780 5a919999995bd86ff6fcf43f63de7ee8 692 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 415 472 1.0E-6 T 13-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 COP00_18780 5a919999995bd86ff6fcf43f63de7ee8 692 SUPERFAMILY SSF55804 533 679 1.07E-15 T 13-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 COP00_18780 5a919999995bd86ff6fcf43f63de7ee8 692 Gene3D G3DSA:3.40.930.10 530 680 4.2E-11 T 13-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 COP00_18780 5a919999995bd86ff6fcf43f63de7ee8 692 SUPERFAMILY SSF63520 204 294 1.31E-22 T 13-10-2018 IPR036634 PRD domain superfamily GO:0006355 COP00_18780 5a919999995bd86ff6fcf43f63de7ee8 692 SUPERFAMILY SSF46785 88 151 9.97E-7 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_18780 5a919999995bd86ff6fcf43f63de7ee8 692 SUPERFAMILY SSF63520 310 406 5.1E-20 T 13-10-2018 IPR036634 PRD domain superfamily GO:0006355 COP00_13295 8fe3f03919af251595e91e71b9066abb 387 Gene3D G3DSA:3.40.50.12580 200 361 2.9E-59 T 13-10-2018 COP00_13295 8fe3f03919af251595e91e71b9066abb 387 Gene3D G3DSA:3.40.50.11820 36 368 2.9E-59 T 13-10-2018 COP00_13295 8fe3f03919af251595e91e71b9066abb 387 SUPERFAMILY SSF53756 87 375 2.83E-24 T 13-10-2018 COP00_13295 8fe3f03919af251595e91e71b9066abb 387 Pfam PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase 20 374 6.1E-79 T 13-10-2018 IPR007554 CDP-glycerol glycerophosphotransferase GO:0016020|GO:0047355 COP00_06600 e40727649067d8a43e4d5c676e3ec2ab 282 ProSitePatterns PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 75 100 - T 13-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 COP00_06600 e40727649067d8a43e4d5c676e3ec2ab 282 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 5 120 4.3E-40 T 13-10-2018 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 COP00_06600 e40727649067d8a43e4d5c676e3ec2ab 282 SUPERFAMILY SSF51735 122 280 1.44E-54 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily COP00_06600 e40727649067d8a43e4d5c676e3ec2ab 282 Hamap MF_01576 Bifunctional protein FolD [folD]. 3 282 39.997 T 13-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 COP00_06600 e40727649067d8a43e4d5c676e3ec2ab 282 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 123 281 1.4E-74 T 13-10-2018 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0004488 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 COP00_06600 e40727649067d8a43e4d5c676e3ec2ab 282 Gene3D G3DSA:3.40.50.10860 8 276 1.4E-117 T 13-10-2018 COP00_06600 e40727649067d8a43e4d5c676e3ec2ab 282 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 74 101 1.2E-86 T 13-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 COP00_06600 e40727649067d8a43e4d5c676e3ec2ab 282 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 109 130 1.2E-86 T 13-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 COP00_06600 e40727649067d8a43e4d5c676e3ec2ab 282 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 255 273 1.2E-86 T 13-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 COP00_06600 e40727649067d8a43e4d5c676e3ec2ab 282 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 154 174 1.2E-86 T 13-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 COP00_06600 e40727649067d8a43e4d5c676e3ec2ab 282 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 203 232 1.2E-86 T 13-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 COP00_06600 e40727649067d8a43e4d5c676e3ec2ab 282 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 238 254 1.2E-86 T 13-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 COP00_06600 e40727649067d8a43e4d5c676e3ec2ab 282 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 33 55 1.2E-86 T 13-10-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 COP00_06600 e40727649067d8a43e4d5c676e3ec2ab 282 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 259 267 - T 13-10-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|MetaCyc: PWY-7909|Reactome: R-HSA-196757 COP00_06600 e40727649067d8a43e4d5c676e3ec2ab 282 Gene3D G3DSA:3.40.50.720 6 258 1.4E-117 T 13-10-2018 COP00_06600 e40727649067d8a43e4d5c676e3ec2ab 282 SUPERFAMILY SSF53223 1 121 1.82E-40 T 13-10-2018 COP00_20815 0eac48957383b4d4af7f52eb86697631 448 Gene3D G3DSA:2.60.40.10 119 195 9.2E-8 T 13-10-2018 IPR013783 Immunoglobulin-like fold COP00_15295 a04e7a784bf95d2c2035cdc3b70281c9 271 Gene3D G3DSA:2.60.120.10 18 126 3.8E-36 T 13-10-2018 IPR014710 RmlC-like jelly roll fold COP00_15295 a04e7a784bf95d2c2035cdc3b70281c9 271 TIGRFAM TIGR04378 myo_inos_iolB: 5-deoxy-glucuronate isomerase 22 268 3.2E-108 T 13-10-2018 IPR024203 5-deoxy-glucuronate isomerase, IolB GO:0008880|GO:0019310 KEGG: 00562+5.3.1.30 COP00_15295 a04e7a784bf95d2c2035cdc3b70281c9 271 Gene3D G3DSA:2.60.120.10 127 271 1.4E-59 T 13-10-2018 IPR014710 RmlC-like jelly roll fold COP00_15295 a04e7a784bf95d2c2035cdc3b70281c9 271 Hamap MF_01673 5-deoxy-glucuronate isomerase [iolB]. 1 271 62.458 T 13-10-2018 IPR023770 5-deoxy-glucuronate isomerase, Bacilli GO:0008880|GO:0019310 KEGG: 00562+5.3.1.30 COP00_15295 a04e7a784bf95d2c2035cdc3b70281c9 271 PIRSF PIRSF036628 1 271 3.6E-115 T 13-10-2018 IPR024203 5-deoxy-glucuronate isomerase, IolB GO:0008880|GO:0019310 KEGG: 00562+5.3.1.30 COP00_15295 a04e7a784bf95d2c2035cdc3b70281c9 271 SUPERFAMILY SSF51182 12 257 6.2E-71 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily COP00_15295 a04e7a784bf95d2c2035cdc3b70281c9 271 Pfam PF04962 KduI/IolB family 14 268 2.0E-106 T 13-10-2018 IPR021120 KduI/IolB isomerase GO:0016861 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 COP00_15485 ac6326d1907e1e8e32a468931ab4287f 468 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 4 172 1.2E-49 T 13-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 COP00_15485 ac6326d1907e1e8e32a468931ab4287f 468 Gene3D G3DSA:1.20.5.320 437 468 2.4E-17 T 13-10-2018 COP00_15485 ac6326d1907e1e8e32a468931ab4287f 468 SUPERFAMILY SSF51735 4 175 3.71E-51 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily COP00_15485 ac6326d1907e1e8e32a468931ab4287f 468 SUPERFAMILY SSF48179 175 467 6.39E-123 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 COP00_15485 ac6326d1907e1e8e32a468931ab4287f 468 PIRSF PIRSF000109 1 468 3.7E-226 T 13-10-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 COP00_15485 ac6326d1907e1e8e32a468931ab4287f 468 SMART SM01350 177 467 1.3E-197 T 13-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 COP00_15485 ac6326d1907e1e8e32a468931ab4287f 468 Gene3D G3DSA:1.10.1040.10 179 434 3.5E-103 T 13-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 COP00_15485 ac6326d1907e1e8e32a468931ab4287f 468 Gene3D G3DSA:3.40.50.720 1 178 2.0E-54 T 13-10-2018 COP00_15485 ac6326d1907e1e8e32a468931ab4287f 468 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 177 466 1.5E-124 T 13-10-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 COP00_15485 ac6326d1907e1e8e32a468931ab4287f 468 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 118 143 2.0E-80 T 13-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 COP00_15485 ac6326d1907e1e8e32a468931ab4287f 468 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 356 378 2.0E-80 T 13-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 COP00_15485 ac6326d1907e1e8e32a468931ab4287f 468 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 166 194 2.0E-80 T 13-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 COP00_15485 ac6326d1907e1e8e32a468931ab4287f 468 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 248 275 2.0E-80 T 13-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 COP00_15485 ac6326d1907e1e8e32a468931ab4287f 468 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 3 26 2.0E-80 T 13-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 COP00_15485 ac6326d1907e1e8e32a468931ab4287f 468 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 65 94 2.0E-80 T 13-10-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0004616|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 COP00_15485 ac6326d1907e1e8e32a468931ab4287f 468 ProSitePatterns PS00461 6-phosphogluconate dehydrogenase signature. 252 264 - T 13-10-2018 IPR006184 6-phosphogluconate-binding site GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 COP00_15485 ac6326d1907e1e8e32a468931ab4287f 468 TIGRFAM TIGR00873 gnd: 6-phosphogluconate dehydrogenase (decarboxylating) 5 467 3.5E-223 T 13-10-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 COP00_15475 41084ef9fc00abcf593c62f5fd25c318 512 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 4 246 4.0E-81 T 13-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 COP00_15475 41084ef9fc00abcf593c62f5fd25c318 512 SUPERFAMILY SSF53067 249 496 1.64E-65 T 13-10-2018 COP00_15475 41084ef9fc00abcf593c62f5fd25c318 512 Gene3D G3DSA:3.30.420.40 248 511 8.8E-88 T 13-10-2018 COP00_15475 41084ef9fc00abcf593c62f5fd25c318 512 TIGRFAM TIGR01314 gntK_FGGY: gluconate kinase 4 507 5.0E-287 T 13-10-2018 IPR006002 Gluconate kinase GO:0019521|GO:0046316 KEGG: 00030+2.7.1.12|MetaCyc: PWY-5530 COP00_15475 41084ef9fc00abcf593c62f5fd25c318 512 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 256 451 2.8E-36 T 13-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 COP00_15475 41084ef9fc00abcf593c62f5fd25c318 512 PIRSF PIRSF000538 2 503 2.2E-139 T 13-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 COP00_15475 41084ef9fc00abcf593c62f5fd25c318 512 SUPERFAMILY SSF53067 4 248 4.18E-66 T 13-10-2018 COP00_15475 41084ef9fc00abcf593c62f5fd25c318 512 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 363 383 - T 13-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 COP00_15475 41084ef9fc00abcf593c62f5fd25c318 512 Gene3D G3DSA:3.30.420.40 2 247 1.2E-79 T 13-10-2018 COP00_06070 89d57acb310082f8b16844b345dee171 206 Gene3D G3DSA:2.60.480.10 2 96 4.8E-14 T 13-10-2018 IPR038548 Stage V sporulation protein AA, N-terminal domain superfamily COP00_06070 89d57acb310082f8b16844b345dee171 206 Pfam PF12164 Stage V sporulation protein AA 3 88 3.7E-23 T 13-10-2018 IPR021997 Stage V sporulation protein AA COP00_24110 23adb5f1444195c4d1cbef2073c827ba 736 SUPERFAMILY SSF55785 19 139 2.62E-15 T 13-10-2018 IPR035965 PAS domain superfamily COP00_24110 23adb5f1444195c4d1cbef2073c827ba 736 Pfam PF08448 PAS fold 161 263 9.9E-8 T 13-10-2018 IPR013656 PAS fold-4 COP00_24110 23adb5f1444195c4d1cbef2073c827ba 736 SUPERFAMILY SSF55785 259 371 9.18E-20 T 13-10-2018 IPR035965 PAS domain superfamily COP00_24110 23adb5f1444195c4d1cbef2073c827ba 736 Gene3D G3DSA:3.30.450.20 391 504 6.7E-11 T 13-10-2018 COP00_24110 23adb5f1444195c4d1cbef2073c827ba 736 SMART SM00387 622 729 6.8E-33 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase COP00_24110 23adb5f1444195c4d1cbef2073c827ba 736 Gene3D G3DSA:3.30.450.20 149 274 2.2E-16 T 13-10-2018 COP00_24110 23adb5f1444195c4d1cbef2073c827ba 736 Gene3D G3DSA:3.30.450.20 275 390 1.3E-19 T 13-10-2018 COP00_24110 23adb5f1444195c4d1cbef2073c827ba 736 SUPERFAMILY SSF55874 574 730 4.85E-42 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily COP00_24110 23adb5f1444195c4d1cbef2073c827ba 736 PRINTS PR00344 Bacterial sensor protein C-terminal signature 660 674 1.3E-16 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 COP00_24110 23adb5f1444195c4d1cbef2073c827ba 736 PRINTS PR00344 Bacterial sensor protein C-terminal signature 713 726 1.3E-16 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 COP00_24110 23adb5f1444195c4d1cbef2073c827ba 736 PRINTS PR00344 Bacterial sensor protein C-terminal signature 689 707 1.3E-16 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 COP00_24110 23adb5f1444195c4d1cbef2073c827ba 736 PRINTS PR00344 Bacterial sensor protein C-terminal signature 678 688 1.3E-16 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 COP00_24110 23adb5f1444195c4d1cbef2073c827ba 736 SMART SM00091 153 219 0.0029 T 13-10-2018 IPR000014 PAS domain COP00_24110 23adb5f1444195c4d1cbef2073c827ba 736 SMART SM00091 274 342 1.1E-8 T 13-10-2018 IPR000014 PAS domain COP00_24110 23adb5f1444195c4d1cbef2073c827ba 736 SMART SM00091 394 459 0.46 T 13-10-2018 IPR000014 PAS domain COP00_24110 23adb5f1444195c4d1cbef2073c827ba 736 SMART SM00091 32 98 3.7E-8 T 13-10-2018 IPR000014 PAS domain COP00_24110 23adb5f1444195c4d1cbef2073c827ba 736 Pfam PF00512 His Kinase A (phospho-acceptor) domain 518 578 9.2E-15 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 COP00_24110 23adb5f1444195c4d1cbef2073c827ba 736 Pfam PF00989 PAS fold 33 138 1.2E-7 T 13-10-2018 IPR013767 PAS fold GO:0006355 COP00_24110 23adb5f1444195c4d1cbef2073c827ba 736 SMART SM00388 516 580 2.3E-15 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 COP00_24110 23adb5f1444195c4d1cbef2073c827ba 736 Gene3D G3DSA:3.30.450.20 23 139 3.2E-16 T 13-10-2018 COP00_24110 23adb5f1444195c4d1cbef2073c827ba 736 Gene3D G3DSA:3.30.565.10 582 735 5.0E-48 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily COP00_24110 23adb5f1444195c4d1cbef2073c827ba 736 Pfam PF13188 PAS domain 395 433 6.6E-5 T 13-10-2018 IPR000014 PAS domain COP00_24110 23adb5f1444195c4d1cbef2073c827ba 736 SUPERFAMILY SSF55785 138 260 5.06E-15 T 13-10-2018 IPR035965 PAS domain superfamily COP00_24110 23adb5f1444195c4d1cbef2073c827ba 736 SUPERFAMILY SSF47384 511 578 5.1E-12 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 COP00_24110 23adb5f1444195c4d1cbef2073c827ba 736 SUPERFAMILY SSF55785 378 446 1.29E-11 T 13-10-2018 IPR035965 PAS domain superfamily COP00_24110 23adb5f1444195c4d1cbef2073c827ba 736 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 624 727 1.9E-25 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase COP00_24110 23adb5f1444195c4d1cbef2073c827ba 736 Gene3D G3DSA:1.10.287.130 505 579 1.7E-16 T 13-10-2018 COP00_24110 23adb5f1444195c4d1cbef2073c827ba 736 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 33 147 3.1E-9 T 13-10-2018 IPR000014 PAS domain COP00_24110 23adb5f1444195c4d1cbef2073c827ba 736 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 151 269 2.2E-11 T 13-10-2018 IPR000014 PAS domain COP00_24110 23adb5f1444195c4d1cbef2073c827ba 736 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 272 389 1.4E-12 T 13-10-2018 IPR000014 PAS domain COP00_24110 23adb5f1444195c4d1cbef2073c827ba 736 Pfam PF13426 PAS domain 285 375 2.9E-10 T 13-10-2018 IPR000014 PAS domain COP00_23735 10e46f90c914dfc08b352769bdc6679e 355 Gene3D G3DSA:3.40.50.300 2 299 5.4E-81 T 13-10-2018 COP00_23735 10e46f90c914dfc08b352769bdc6679e 355 SUPERFAMILY SSF50331 240 348 8.5E-7 T 13-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal COP00_23735 10e46f90c914dfc08b352769bdc6679e 355 Pfam PF12857 TOBE-like domain 290 347 2.0E-14 T 13-10-2018 IPR024765 TOBE-like domain KEGG: 00920+3.6.3.25 COP00_23735 10e46f90c914dfc08b352769bdc6679e 355 SMART SM00382 27 214 8.0E-20 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_23735 10e46f90c914dfc08b352769bdc6679e 355 Pfam PF00005 ABC transporter 18 164 4.2E-37 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 COP00_23735 10e46f90c914dfc08b352769bdc6679e 355 SUPERFAMILY SSF52540 3 244 4.39E-87 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_23735 10e46f90c914dfc08b352769bdc6679e 355 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 COP00_23735 10e46f90c914dfc08b352769bdc6679e 355 TIGRFAM TIGR00968 3a0106s01: sulfate ABC transporter, ATP-binding protein 3 242 1.0E-119 T 13-10-2018 IPR005666 Sulphate transport system permease protein 1 GO:0008272|GO:0015419|GO:0016020|GO:0043190 KEGG: 00920+3.6.3.25 COP00_00995 b28739b216deb69790798206c0635aa6 306 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 127 138 2.2E-23 T 13-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 COP00_00995 b28739b216deb69790798206c0635aa6 306 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 242 251 2.2E-23 T 13-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 COP00_00995 b28739b216deb69790798206c0635aa6 306 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 254 277 2.2E-23 T 13-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 COP00_00995 b28739b216deb69790798206c0635aa6 306 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 43 62 2.2E-23 T 13-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 COP00_00995 b28739b216deb69790798206c0635aa6 306 Gene3D G3DSA:3.40.50.1370 7 285 2.3E-107 T 13-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 COP00_00995 b28739b216deb69790798206c0635aa6 306 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 43 50 - T 13-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 COP00_00995 b28739b216deb69790798206c0635aa6 306 SUPERFAMILY SSF53671 1 291 1.15E-93 T 13-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 COP00_00995 b28739b216deb69790798206c0635aa6 306 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 2 140 6.9E-44 T 13-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 COP00_00995 b28739b216deb69790798206c0635aa6 306 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 2 288 4.3E-99 T 13-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 COP00_00995 b28739b216deb69790798206c0635aa6 306 Gene3D G3DSA:3.40.50.1370 127 268 2.3E-107 T 13-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 COP00_00995 b28739b216deb69790798206c0635aa6 306 PRINTS PR00101 Aspartate carbamoyltransferase signature 207 216 1.3E-35 T 13-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 COP00_00995 b28739b216deb69790798206c0635aa6 306 PRINTS PR00101 Aspartate carbamoyltransferase signature 71 80 1.3E-35 T 13-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 COP00_00995 b28739b216deb69790798206c0635aa6 306 PRINTS PR00101 Aspartate carbamoyltransferase signature 126 143 1.3E-35 T 13-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 COP00_00995 b28739b216deb69790798206c0635aa6 306 PRINTS PR00101 Aspartate carbamoyltransferase signature 246 251 1.3E-35 T 13-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 COP00_00995 b28739b216deb69790798206c0635aa6 306 PRINTS PR00101 Aspartate carbamoyltransferase signature 270 284 1.3E-35 T 13-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 COP00_00995 b28739b216deb69790798206c0635aa6 306 PRINTS PR00101 Aspartate carbamoyltransferase signature 33 55 1.3E-35 T 13-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 COP00_00995 b28739b216deb69790798206c0635aa6 306 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 146 285 3.4E-19 T 13-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 COP00_00995 b28739b216deb69790798206c0635aa6 306 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 1 291 39.364 T 13-10-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 COP00_16365 161add6992800a3603556103ee9e7fe5 476 Pfam PF01171 PP-loop family 20 202 1.3E-58 T 13-10-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 COP00_16365 161add6992800a3603556103ee9e7fe5 476 SUPERFAMILY SSF52402 6 234 4.45E-51 T 13-10-2018 COP00_16365 161add6992800a3603556103ee9e7fe5 476 SUPERFAMILY SSF82829 214 322 7.85E-9 T 13-10-2018 COP00_16365 161add6992800a3603556103ee9e7fe5 476 Pfam PF09179 TilS substrate binding domain 256 322 1.3E-6 T 13-10-2018 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 COP00_16365 161add6992800a3603556103ee9e7fe5 476 Gene3D G3DSA:3.40.50.620 19 162 5.0E-67 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold COP00_16365 161add6992800a3603556103ee9e7fe5 476 Gene3D G3DSA:1.10.10.1360 124 208 5.0E-67 T 13-10-2018 COP00_16365 161add6992800a3603556103ee9e7fe5 476 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 385 430 2.4E-21 T 13-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 COP00_16365 161add6992800a3603556103ee9e7fe5 476 Gene3D G3DSA:1.20.59.30 244 328 4.2E-30 T 13-10-2018 COP00_16365 161add6992800a3603556103ee9e7fe5 476 Pfam PF11734 TilS substrate C-terminal domain 387 445 5.2E-16 T 13-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 COP00_16365 161add6992800a3603556103ee9e7fe5 476 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 20 206 4.6E-59 T 13-10-2018 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 COP00_16365 161add6992800a3603556103ee9e7fe5 476 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 4 317 23.997 T 13-10-2018 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 COP00_16365 161add6992800a3603556103ee9e7fe5 476 SMART SM00977 385 458 1.0E-26 T 13-10-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 COP00_16365 161add6992800a3603556103ee9e7fe5 476 SUPERFAMILY SSF56037 373 445 9.94E-19 T 13-10-2018 COP00_10865 11f7d16463d34475123720c53f833d7a 363 SUPERFAMILY SSF50331 237 363 1.19E-26 T 13-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal COP00_10865 11f7d16463d34475123720c53f833d7a 363 Gene3D G3DSA:2.40.50.940 223 356 5.9E-33 T 13-10-2018 COP00_10865 11f7d16463d34475123720c53f833d7a 363 SUPERFAMILY SSF52540 4 243 1.92E-84 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_10865 11f7d16463d34475123720c53f833d7a 363 SMART SM00382 29 212 2.7E-12 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_10865 11f7d16463d34475123720c53f833d7a 363 Gene3D G3DSA:3.40.50.300 3 222 8.0E-63 T 13-10-2018 COP00_10865 11f7d16463d34475123720c53f833d7a 363 Pfam PF08402 TOBE domain 285 355 1.3E-8 T 13-10-2018 IPR013611 Transport-associated OB, type 2 GO:0005524|GO:0022857|GO:0043190|GO:0055085 COP00_10865 11f7d16463d34475123720c53f833d7a 363 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 COP00_10865 11f7d16463d34475123720c53f833d7a 363 Gene3D G3DSA:2.40.50.140 292 347 5.9E-33 T 13-10-2018 COP00_10865 11f7d16463d34475123720c53f833d7a 363 Pfam PF00005 ABC transporter 20 162 8.6E-29 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 COP00_21850 ea2a6fa19fa52838d8dc4298c85b7553 438 Gene3D G3DSA:3.30.465.10 349 436 5.4E-16 T 13-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 COP00_21850 ea2a6fa19fa52838d8dc4298c85b7553 438 SMART SM01091 354 431 2.3E-21 T 13-10-2018 IPR005170 Transporter-associated domain COP00_21850 ea2a6fa19fa52838d8dc4298c85b7553 438 Pfam PF03471 Transporter associated domain 355 429 2.1E-17 T 13-10-2018 IPR005170 Transporter-associated domain COP00_21850 ea2a6fa19fa52838d8dc4298c85b7553 438 Gene3D G3DSA:3.10.580.10 195 348 3.8E-49 T 13-10-2018 COP00_21850 ea2a6fa19fa52838d8dc4298c85b7553 438 Pfam PF00571 CBS domain 217 272 6.4E-5 T 13-10-2018 IPR000644 CBS domain COP00_21850 ea2a6fa19fa52838d8dc4298c85b7553 438 Pfam PF00571 CBS domain 290 338 2.9E-4 T 13-10-2018 IPR000644 CBS domain COP00_21850 ea2a6fa19fa52838d8dc4298c85b7553 438 SUPERFAMILY SSF56176 352 431 1.39E-16 T 13-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 COP00_21850 ea2a6fa19fa52838d8dc4298c85b7553 438 Pfam PF01595 Domain of unknown function DUF21 8 201 3.2E-47 T 13-10-2018 IPR002550 CNNM, transmembrane domain COP00_21850 ea2a6fa19fa52838d8dc4298c85b7553 438 SUPERFAMILY SSF54631 204 341 1.25E-29 T 13-10-2018 COP00_10120 e9aa4e43aba98a18fb748dbf81654e7a 490 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 248 255 - T 13-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 COP00_10120 e9aa4e43aba98a18fb748dbf81654e7a 490 Gene3D G3DSA:3.40.605.10 10 471 2.5E-196 T 13-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 COP00_10120 e9aa4e43aba98a18fb748dbf81654e7a 490 SUPERFAMILY SSF53720 4 481 2.09E-175 T 13-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 COP00_10120 e9aa4e43aba98a18fb748dbf81654e7a 490 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 276 287 - T 13-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 COP00_10120 e9aa4e43aba98a18fb748dbf81654e7a 490 Pfam PF00171 Aldehyde dehydrogenase family 11 476 4.8E-185 T 13-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 COP00_10120 e9aa4e43aba98a18fb748dbf81654e7a 490 TIGRFAM TIGR01804 BADH: betaine-aldehyde dehydrogenase 6 474 5.8E-234 T 13-10-2018 IPR011264 Betaine aldehyde dehydrogenase GO:0008802|GO:0019285|GO:0046872 KEGG: 00260+1.2.1.8|MetaCyc: PWY-3722|MetaCyc: PWY-7494 COP00_10120 e9aa4e43aba98a18fb748dbf81654e7a 490 Gene3D G3DSA:3.40.309.10 253 446 2.5E-196 T 13-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 COP00_05540 52bba94595d8bf81a465d39f9e58e16f 379 Gene3D G3DSA:3.40.50.2000 177 358 2.9E-126 T 13-10-2018 COP00_05540 52bba94595d8bf81a465d39f9e58e16f 379 Pfam PF00534 Glycosyl transferases group 1 190 350 2.7E-41 T 13-10-2018 IPR001296 Glycosyl transferase, family 1 COP00_05540 52bba94595d8bf81a465d39f9e58e16f 379 Gene3D G3DSA:3.40.50.2000 15 368 2.9E-126 T 13-10-2018 COP00_05540 52bba94595d8bf81a465d39f9e58e16f 379 Pfam PF13439 Glycosyltransferase Family 4 15 179 1.1E-26 T 13-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 COP00_05540 52bba94595d8bf81a465d39f9e58e16f 379 SUPERFAMILY SSF53756 1 375 2.55E-91 T 13-10-2018 COP00_05540 52bba94595d8bf81a465d39f9e58e16f 379 TIGRFAM TIGR03999 thiol_BshA: N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA 5 375 4.6E-175 T 13-10-2018 IPR023881 N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA GO:0016757|GO:0071793 COP00_21115 2d7174a6d662a108035fb1050f59e1cc 263 Hamap MF_01114 Regulatory protein RecX [recX]. 42 209 17.177 T 13-10-2018 IPR003783 Regulatory protein RecX GO:0006282 COP00_21115 2d7174a6d662a108035fb1050f59e1cc 263 Gene3D G3DSA:1.10.10.10 216 263 3.2E-13 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_21115 2d7174a6d662a108035fb1050f59e1cc 263 Gene3D G3DSA:1.10.10.10 153 215 3.5E-17 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_21115 2d7174a6d662a108035fb1050f59e1cc 263 Pfam PF02631 RecX family 210 261 1.1E-4 T 13-10-2018 IPR003783 Regulatory protein RecX GO:0006282 COP00_21115 2d7174a6d662a108035fb1050f59e1cc 263 Pfam PF02631 RecX family 84 205 3.7E-27 T 13-10-2018 IPR003783 Regulatory protein RecX GO:0006282 COP00_21115 2d7174a6d662a108035fb1050f59e1cc 263 Gene3D G3DSA:1.10.10.2800 1 107 1.1E-36 T 13-10-2018 COP00_21115 2d7174a6d662a108035fb1050f59e1cc 263 Gene3D G3DSA:1.10.10.10 108 152 1.0E-14 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_03450 2d5d68631cd99e323ddd313f85a7f7fa 172 SUPERFAMILY SSF52540 1 131 8.4E-15 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_03450 2d5d68631cd99e323ddd313f85a7f7fa 172 Gene3D G3DSA:3.40.50.300 1 171 4.8E-45 T 13-10-2018 COP00_03450 2d5d68631cd99e323ddd313f85a7f7fa 172 Pfam PF13238 AAA domain 6 125 4.1E-11 T 13-10-2018 COP00_17910 140398cc950dcd496229d22fe6aa1ca3 314 ProSitePatterns PS00672 Serine proteases, V8 family, histidine active site. 125 139 - T 13-10-2018 IPR028301 Serine proteases, V8 family, histidine active site COP00_17910 140398cc950dcd496229d22fe6aa1ca3 314 Gene3D G3DSA:2.40.10.10 95 285 1.1E-62 T 13-10-2018 COP00_17910 140398cc950dcd496229d22fe6aa1ca3 314 ProSitePatterns PS00673 Serine proteases, V8 family, serine active site. 254 264 - T 13-10-2018 IPR000126 Serine proteases, V8 family, serine active site GO:0006508|GO:0008236 COP00_17910 140398cc950dcd496229d22fe6aa1ca3 314 Gene3D G3DSA:2.40.10.10 110 205 1.1E-62 T 13-10-2018 COP00_17910 140398cc950dcd496229d22fe6aa1ca3 314 Pfam PF00089 Trypsin 103 276 7.6E-16 T 13-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 COP00_17910 140398cc950dcd496229d22fe6aa1ca3 314 SUPERFAMILY SSF50494 94 304 2.16E-31 T 13-10-2018 IPR009003 Peptidase S1, PA clan COP00_17910 140398cc950dcd496229d22fe6aa1ca3 314 PRINTS PR00839 V8 serine protease family signature 155 167 1.3E-33 T 13-10-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 COP00_17910 140398cc950dcd496229d22fe6aa1ca3 314 PRINTS PR00839 V8 serine protease family signature 273 285 1.3E-33 T 13-10-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 COP00_17910 140398cc950dcd496229d22fe6aa1ca3 314 PRINTS PR00839 V8 serine protease family signature 248 264 1.3E-33 T 13-10-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 COP00_17910 140398cc950dcd496229d22fe6aa1ca3 314 PRINTS PR00839 V8 serine protease family signature 100 117 1.3E-33 T 13-10-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 COP00_17910 140398cc950dcd496229d22fe6aa1ca3 314 PRINTS PR00839 V8 serine protease family signature 124 141 1.3E-33 T 13-10-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 COP00_17910 140398cc950dcd496229d22fe6aa1ca3 314 PRINTS PR00839 V8 serine protease family signature 215 228 1.3E-33 T 13-10-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 COP00_08325 fb4f689ba2413dd1e8714b7202d5a50c 178 Gene3D G3DSA:3.30.70.1740 92 168 1.2E-27 T 13-10-2018 IPR038117 Bypass of forespore C, C-terminal domain superfamily COP00_08325 fb4f689ba2413dd1e8714b7202d5a50c 178 Pfam PF08955 BofC C-terminal domain 92 165 2.6E-27 T 13-10-2018 IPR015050 Bypass of forespore C, C-terminal COP00_08325 fb4f689ba2413dd1e8714b7202d5a50c 178 Gene3D G3DSA:3.10.20.420 38 91 1.4E-17 T 13-10-2018 IPR038118 Bypass-of-forespore C, N-terminal domain superfamily COP00_08325 fb4f689ba2413dd1e8714b7202d5a50c 178 Pfam PF08977 Bypass of Forespore C, N terminal 40 90 2.0E-19 T 13-10-2018 IPR015071 Bypass-of-forespore C, N-terminal COP00_03800 4b83949ac2cfbed93796c7e32c0222c8 237 ProSitePatterns PS00042 Crp-type HTH domain signature. 175 198 - T 13-10-2018 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 COP00_03800 4b83949ac2cfbed93796c7e32c0222c8 237 Gene3D G3DSA:1.10.10.10 145 233 1.6E-25 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_03800 4b83949ac2cfbed93796c7e32c0222c8 237 SUPERFAMILY SSF46785 146 232 4.05E-20 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_03800 4b83949ac2cfbed93796c7e32c0222c8 237 Pfam PF00027 Cyclic nucleotide-binding domain 28 113 9.3E-16 T 13-10-2018 IPR000595 Cyclic nucleotide-binding domain COP00_03800 4b83949ac2cfbed93796c7e32c0222c8 237 SMART SM00100 8 128 8.5E-17 T 13-10-2018 IPR000595 Cyclic nucleotide-binding domain COP00_03800 4b83949ac2cfbed93796c7e32c0222c8 237 SMART SM00419 167 216 2.8E-11 T 13-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 COP00_03800 4b83949ac2cfbed93796c7e32c0222c8 237 Gene3D G3DSA:2.60.120.10 10 144 1.7E-27 T 13-10-2018 IPR014710 RmlC-like jelly roll fold COP00_03800 4b83949ac2cfbed93796c7e32c0222c8 237 SUPERFAMILY SSF51206 16 144 1.03E-29 T 13-10-2018 IPR018490 Cyclic nucleotide-binding-like COP00_03800 4b83949ac2cfbed93796c7e32c0222c8 237 Pfam PF13545 Crp-like helix-turn-helix domain 149 222 5.7E-14 T 13-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 COP00_15785 f7485738a767beb6f14c10fadcf5830e 248 TIGRFAM TIGR00502 nagB: glucosamine-6-phosphate deaminase 1 246 6.2E-90 T 13-10-2018 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 COP00_15785 f7485738a767beb6f14c10fadcf5830e 248 SUPERFAMILY SSF100950 1 241 1.15E-88 T 13-10-2018 IPR037171 NagB/RpiA transferase-like COP00_15785 f7485738a767beb6f14c10fadcf5830e 248 Gene3D G3DSA:3.40.50.1360 1 241 8.9E-92 T 13-10-2018 COP00_15785 f7485738a767beb6f14c10fadcf5830e 248 Hamap MF_01241 Glucosamine-6-phosphate deaminase [nagB]. 1 241 40.44 T 13-10-2018 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 COP00_15785 f7485738a767beb6f14c10fadcf5830e 248 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 11 229 8.1E-20 T 13-10-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 COP00_15785 f7485738a767beb6f14c10fadcf5830e 248 ProSitePatterns PS01161 Glucosamine/galactosamine-6-phosphate isomerases signature. 120 138 - T 13-10-2018 IPR018321 Glucosamine-6-phosphate isomerase, conserved site GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70171 COP00_16375 6c064eb05c97822d2c43c073a46bc3f0 639 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 109 601 5.5E-249 T 13-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 COP00_16375 6c064eb05c97822d2c43c073a46bc3f0 639 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 3 609 38.764 T 13-10-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 COP00_16375 6c064eb05c97822d2c43c073a46bc3f0 639 Gene3D G3DSA:1.10.8.60 331 408 1.4E-30 T 13-10-2018 COP00_16375 6c064eb05c97822d2c43c073a46bc3f0 639 SUPERFAMILY SSF52540 151 401 1.34E-73 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_16375 6c064eb05c97822d2c43c073a46bc3f0 639 ProSitePatterns PS00674 AAA-protein family signature. 300 318 - T 13-10-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 COP00_16375 6c064eb05c97822d2c43c073a46bc3f0 639 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 197 329 1.4E-44 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 COP00_16375 6c064eb05c97822d2c43c073a46bc3f0 639 Gene3D G3DSA:3.40.50.300 147 330 7.3E-70 T 13-10-2018 COP00_16375 6c064eb05c97822d2c43c073a46bc3f0 639 SUPERFAMILY SSF140990 411 606 2.75E-73 T 13-10-2018 IPR037219 Peptidase M41-like GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 COP00_16375 6c064eb05c97822d2c43c073a46bc3f0 639 Pfam PF01434 Peptidase family M41 391 600 2.4E-89 T 13-10-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 COP00_16375 6c064eb05c97822d2c43c073a46bc3f0 639 SMART SM00382 193 332 2.2E-25 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_16375 6c064eb05c97822d2c43c073a46bc3f0 639 Gene3D G3DSA:1.20.58.760 411 616 2.2E-76 T 13-10-2018 COP00_16375 6c064eb05c97822d2c43c073a46bc3f0 639 Pfam PF06480 FtsH Extracellular 9 60 1.5E-9 T 13-10-2018 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 Reactome: R-HSA-8949664 COP00_19375 2696930ca266843203e620122364a5cb 1020 SUPERFAMILY SSF52172 679 813 8.82E-37 T 13-10-2018 IPR011006 CheY-like superfamily COP00_19375 2696930ca266843203e620122364a5cb 1020 Pfam PF06580 Histidine kinase 816 896 1.4E-21 T 13-10-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 COP00_19375 2696930ca266843203e620122364a5cb 1020 SMART SM00448 687 800 3.2E-34 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 COP00_19375 2696930ca266843203e620122364a5cb 1020 PRINTS PR00344 Bacterial sensor protein C-terminal signature 596 606 1.4E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 COP00_19375 2696930ca266843203e620122364a5cb 1020 PRINTS PR00344 Bacterial sensor protein C-terminal signature 610 628 1.4E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 COP00_19375 2696930ca266843203e620122364a5cb 1020 PRINTS PR00344 Bacterial sensor protein C-terminal signature 634 647 1.4E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 COP00_19375 2696930ca266843203e620122364a5cb 1020 PRINTS PR00344 Bacterial sensor protein C-terminal signature 578 592 1.4E-15 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 COP00_19375 2696930ca266843203e620122364a5cb 1020 SUPERFAMILY SSF55874 883 1008 4.32E-15 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily COP00_19375 2696930ca266843203e620122364a5cb 1020 Gene3D G3DSA:3.30.565.10 498 652 2.8E-45 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily COP00_19375 2696930ca266843203e620122364a5cb 1020 Pfam PF00072 Response regulator receiver domain 689 800 1.8E-25 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 COP00_19375 2696930ca266843203e620122364a5cb 1020 Gene3D G3DSA:3.30.565.10 880 1018 1.7E-16 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily COP00_19375 2696930ca266843203e620122364a5cb 1020 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 542 648 1.5E-27 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase COP00_19375 2696930ca266843203e620122364a5cb 1020 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 914 1010 2.0E-9 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase COP00_19375 2696930ca266843203e620122364a5cb 1020 Gene3D G3DSA:1.10.287.130 412 497 6.2E-19 T 13-10-2018 COP00_19375 2696930ca266843203e620122364a5cb 1020 Pfam PF00512 His Kinase A (phospho-acceptor) domain 428 493 1.5E-11 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 COP00_19375 2696930ca266843203e620122364a5cb 1020 Gene3D G3DSA:3.40.50.12740 687 877 2.3E-38 T 13-10-2018 COP00_19375 2696930ca266843203e620122364a5cb 1020 SUPERFAMILY SSF49785 50 185 1.25E-6 T 13-10-2018 IPR008979 Galactose-binding-like domain superfamily COP00_19375 2696930ca266843203e620122364a5cb 1020 SUPERFAMILY SSF47384 417 493 4.12E-14 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 COP00_19375 2696930ca266843203e620122364a5cb 1020 SUPERFAMILY SSF55874 484 650 1.15E-44 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily COP00_19375 2696930ca266843203e620122364a5cb 1020 SMART SM00387 906 1013 8.8E-6 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase COP00_19375 2696930ca266843203e620122364a5cb 1020 SMART SM00387 541 650 1.6E-36 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase COP00_19375 2696930ca266843203e620122364a5cb 1020 Pfam PF07695 7TM diverse intracellular signalling 206 403 1.1E-9 T 13-10-2018 IPR011623 7TM-DISM receptor, extracellular domain, type 1 COP00_19375 2696930ca266843203e620122364a5cb 1020 SMART SM00388 427 495 4.1E-12 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 COP00_01220 d601b3a5fcdb91f7740f9f5cbc3e1895 249 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 23 242 3.5E-81 T 13-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 COP00_01220 d601b3a5fcdb91f7740f9f5cbc3e1895 249 Hamap MF_00104 Ribonuclease 3 [rnc]. 23 239 32.082 T 13-10-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 COP00_01220 d601b3a5fcdb91f7740f9f5cbc3e1895 249 Gene3D G3DSA:3.30.160.20 175 242 2.2E-23 T 13-10-2018 COP00_01220 d601b3a5fcdb91f7740f9f5cbc3e1895 249 Gene3D G3DSA:1.10.1520.10 19 166 6.6E-48 T 13-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 COP00_01220 d601b3a5fcdb91f7740f9f5cbc3e1895 249 SMART SM00535 35 170 1.7E-61 T 13-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 COP00_01220 d601b3a5fcdb91f7740f9f5cbc3e1895 249 ProSitePatterns PS00517 Ribonuclease III family signature. 59 67 - T 13-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 COP00_01220 d601b3a5fcdb91f7740f9f5cbc3e1895 249 SMART SM00358 176 243 1.9E-23 T 13-10-2018 IPR014720 Double-stranded RNA-binding domain COP00_01220 d601b3a5fcdb91f7740f9f5cbc3e1895 249 SUPERFAMILY SSF54768 164 246 3.93E-24 T 13-10-2018 COP00_01220 d601b3a5fcdb91f7740f9f5cbc3e1895 249 Pfam PF14622 Ribonuclease-III-like 33 163 1.0E-36 T 13-10-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 Reactome: R-HSA-203927 COP00_01220 d601b3a5fcdb91f7740f9f5cbc3e1895 249 SUPERFAMILY SSF69065 17 178 4.01E-53 T 13-10-2018 IPR036389 Ribonuclease III, endonuclease domain superfamily GO:0004525|GO:0006396 COP00_01220 d601b3a5fcdb91f7740f9f5cbc3e1895 249 Pfam PF00035 Double-stranded RNA binding motif 177 242 1.5E-17 T 13-10-2018 IPR014720 Double-stranded RNA-binding domain COP00_04315 43296d5550f5d4914ad77e8da1910765 338 Pfam PF00535 Glycosyl transferase family 2 9 179 2.6E-25 T 13-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 COP00_04315 43296d5550f5d4914ad77e8da1910765 338 Gene3D G3DSA:3.90.550.10 2 208 9.9E-28 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases COP00_04315 43296d5550f5d4914ad77e8da1910765 338 SUPERFAMILY SSF53448 5 189 1.03E-24 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases COP00_15065 18fbde5bd7802827b60fb0be9d6b6cda 472 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 367 375 - T 13-10-2018 IPR018120 Glycoside hydrolase family 1, active site COP00_15065 18fbde5bd7802827b60fb0be9d6b6cda 472 Gene3D G3DSA:3.20.20.80 2 471 9.9E-166 T 13-10-2018 COP00_15065 18fbde5bd7802827b60fb0be9d6b6cda 472 SUPERFAMILY SSF51445 7 469 7.84E-168 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily COP00_15065 18fbde5bd7802827b60fb0be9d6b6cda 472 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 13 27 - T 13-10-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site COP00_15065 18fbde5bd7802827b60fb0be9d6b6cda 472 Pfam PF00232 Glycosyl hydrolase family 1 8 468 2.1E-157 T 13-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 COP00_15065 18fbde5bd7802827b60fb0be9d6b6cda 472 PRINTS PR00131 Glycosyl hydrolase family 1 signature 367 375 2.9E-16 T 13-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 COP00_15065 18fbde5bd7802827b60fb0be9d6b6cda 472 PRINTS PR00131 Glycosyl hydrolase family 1 signature 388 399 2.9E-16 T 13-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 COP00_15065 18fbde5bd7802827b60fb0be9d6b6cda 472 PRINTS PR00131 Glycosyl hydrolase family 1 signature 433 445 2.9E-16 T 13-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 COP00_15065 18fbde5bd7802827b60fb0be9d6b6cda 472 PRINTS PR00131 Glycosyl hydrolase family 1 signature 409 426 2.9E-16 T 13-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 COP00_15065 18fbde5bd7802827b60fb0be9d6b6cda 472 PRINTS PR00131 Glycosyl hydrolase family 1 signature 289 303 2.9E-16 T 13-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 COP00_12070 795f5934e88a53a0637d5b261feaa9ef 585 Gene3D G3DSA:2.60.120.260 364 584 4.0E-85 T 13-10-2018 IPR008979 Galactose-binding-like domain superfamily COP00_12070 795f5934e88a53a0637d5b261feaa9ef 585 SUPERFAMILY SSF53474 8 358 4.98E-51 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold COP00_12070 795f5934e88a53a0637d5b261feaa9ef 585 Pfam PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain 335 577 9.4E-52 T 13-10-2018 IPR013736 Xaa-Pro dipeptidyl-peptidase, C-terminal GO:0008239 COP00_12070 795f5934e88a53a0637d5b261feaa9ef 585 SMART SM00939 322 578 1.5E-95 T 13-10-2018 IPR013736 Xaa-Pro dipeptidyl-peptidase, C-terminal GO:0008239 COP00_12070 795f5934e88a53a0637d5b261feaa9ef 585 SUPERFAMILY SSF49785 350 583 4.04E-68 T 13-10-2018 IPR008979 Galactose-binding-like domain superfamily COP00_12070 795f5934e88a53a0637d5b261feaa9ef 585 Gene3D G3DSA:3.40.50.1820 11 353 7.7E-97 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold COP00_12070 795f5934e88a53a0637d5b261feaa9ef 585 Gene3D G3DSA:1.10.3020.10 147 241 7.7E-97 T 13-10-2018 COP00_12070 795f5934e88a53a0637d5b261feaa9ef 585 Pfam PF02129 X-Pro dipeptidyl-peptidase (S15 family) 17 295 6.8E-56 T 13-10-2018 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain GO:0016787 COP00_12070 795f5934e88a53a0637d5b261feaa9ef 585 TIGRFAM TIGR00976 /NonD: hydrolase CocE/NonD family protein 14 584 1.1E-149 T 13-10-2018 IPR005674 CocE/Serine esterase GO:0016787 COP00_21390 c7cb95e9f7ea7b0e60b86c7d20069418 329 Gene3D G3DSA:1.10.8.450 245 278 4.4E-92 T 13-10-2018 COP00_21390 c7cb95e9f7ea7b0e60b86c7d20069418 329 SMART SM00062 32 257 2.1E-26 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF COP00_21390 c7cb95e9f7ea7b0e60b86c7d20069418 329 SUPERFAMILY SSF53850 31 255 1.03E-48 T 13-10-2018 COP00_21390 c7cb95e9f7ea7b0e60b86c7d20069418 329 Pfam PF09084 NMT1/THI5 like 42 254 1.9E-26 T 13-10-2018 IPR015168 SsuA/THI5-like COP00_21390 c7cb95e9f7ea7b0e60b86c7d20069418 329 Gene3D G3DSA:3.40.190.10 113 212 4.4E-92 T 13-10-2018 COP00_21390 c7cb95e9f7ea7b0e60b86c7d20069418 329 Gene3D G3DSA:3.40.190.10 33 310 4.4E-92 T 13-10-2018 COP00_21390 c7cb95e9f7ea7b0e60b86c7d20069418 329 TIGRFAM TIGR01728 SsuA_fam: ABC transporter, substrate-binding protein, aliphatic sulfonates family 33 320 6.7E-99 T 13-10-2018 IPR010067 Aliphatic sulfonates-binding protein GO:0016020|GO:0042626 COP00_17660 ce7092a53338e641f5e81a8126ac35e7 327 TIGRFAM TIGR03814 Gln_ase: glutaminase A 18 327 6.4E-120 T 13-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 COP00_17660 ce7092a53338e641f5e81a8126ac35e7 327 Gene3D G3DSA:3.40.710.10 44 327 4.2E-125 T 13-10-2018 COP00_17660 ce7092a53338e641f5e81a8126ac35e7 327 Hamap MF_00313 Glutaminase [glsA]. 14 327 44.142 T 13-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 COP00_17660 ce7092a53338e641f5e81a8126ac35e7 327 SUPERFAMILY SSF56601 2 327 1.52E-120 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like COP00_17660 ce7092a53338e641f5e81a8126ac35e7 327 Pfam PF04960 Glutaminase 32 327 1.3E-105 T 13-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 COP00_17660 ce7092a53338e641f5e81a8126ac35e7 327 Gene3D G3DSA:1.10.1500.10 71 208 4.2E-125 T 13-10-2018 COP00_18330 3d9cce03c20cd6de5c2870f85eb20995 286 Gene3D G3DSA:3.40.190.290 90 283 1.3E-18 T 13-10-2018 COP00_18330 3d9cce03c20cd6de5c2870f85eb20995 286 Gene3D G3DSA:1.10.10.10 1 89 1.8E-20 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_18330 3d9cce03c20cd6de5c2870f85eb20995 286 SUPERFAMILY SSF46785 1 83 1.36E-16 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_18330 3d9cce03c20cd6de5c2870f85eb20995 286 Pfam PF03466 LysR substrate binding domain 88 280 3.1E-17 T 13-10-2018 IPR005119 LysR, substrate-binding COP00_18330 3d9cce03c20cd6de5c2870f85eb20995 286 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 1.7E-14 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 COP00_18330 3d9cce03c20cd6de5c2870f85eb20995 286 SUPERFAMILY SSF53850 88 281 6.15E-19 T 13-10-2018 COP00_01485 fc0d1b486c55a45e34271812428bd0c4 168 SUPERFAMILY SSF64438 10 166 5.04E-45 T 13-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic COP00_01485 fc0d1b486c55a45e34271812428bd0c4 168 Pfam PF03975 CheD chemotactic sensory transduction 54 160 2.0E-33 T 13-10-2018 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 COP00_01485 fc0d1b486c55a45e34271812428bd0c4 168 Hamap MF_01440 Chemoreceptor glutamine deamidase CheD [cheD]. 7 164 26.869 T 13-10-2018 IPR005659 Chemoreceptor glutamine deamidase CheD GO:0006935|GO:0050568 COP00_01485 fc0d1b486c55a45e34271812428bd0c4 168 Gene3D G3DSA:3.30.1330.200 8 167 2.5E-45 T 13-10-2018 IPR038592 CheD-like superfamily COP00_20790 28699b6efe5ed0a97f881c46a75e75ec 186 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 5 18 6.1E-5 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 COP00_20790 28699b6efe5ed0a97f881c46a75e75ec 186 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 25 48 6.1E-5 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 COP00_20790 28699b6efe5ed0a97f881c46a75e75ec 186 SUPERFAMILY SSF48498 95 182 8.9E-9 T 13-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily COP00_20790 28699b6efe5ed0a97f881c46a75e75ec 186 SUPERFAMILY SSF46689 2 67 2.31E-12 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 COP00_20790 28699b6efe5ed0a97f881c46a75e75ec 186 Gene3D G3DSA:1.10.357.10 47 186 4.3E-12 T 13-10-2018 COP00_20790 28699b6efe5ed0a97f881c46a75e75ec 186 Pfam PF00440 Bacterial regulatory proteins, tetR family 6 50 5.4E-10 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 COP00_20790 28699b6efe5ed0a97f881c46a75e75ec 186 Gene3D G3DSA:1.10.10.60 1 46 4.8E-9 T 13-10-2018 COP00_02085 f4d93c453de476d379104bb0eaa736a3 134 Pfam PF12788 YmaF family 13 69 1.1E-9 T 13-10-2018 IPR024307 YmaF COP00_15355 7e3ae6431e999af8007acde2e91731fc 323 SUPERFAMILY SSF53807 37 306 5.49E-57 T 13-10-2018 COP00_15355 7e3ae6431e999af8007acde2e91731fc 323 Pfam PF01497 Periplasmic binding protein 73 290 8.3E-32 T 13-10-2018 IPR002491 ABC transporter periplasmic binding domain COP00_15355 7e3ae6431e999af8007acde2e91731fc 323 Gene3D G3DSA:3.40.50.1980 152 318 8.5E-57 T 13-10-2018 COP00_15355 7e3ae6431e999af8007acde2e91731fc 323 Gene3D G3DSA:3.40.50.1980 29 151 9.7E-27 T 13-10-2018 COP00_15775 7171931ca476b2ac48de6c0181944665 401 SUPERFAMILY SSF103473 4 385 3.53E-50 T 13-10-2018 IPR036259 MFS transporter superfamily COP00_15775 7171931ca476b2ac48de6c0181944665 401 Gene3D G3DSA:1.20.1250.20 206 389 1.7E-20 T 13-10-2018 COP00_15775 7171931ca476b2ac48de6c0181944665 401 TIGRFAM TIGR00896 CynX: cyanate transporter 16 370 3.3E-140 T 13-10-2018 IPR004747 Cyanate transport system protein GO:0016021 COP00_15775 7171931ca476b2ac48de6c0181944665 401 Pfam PF07690 Major Facilitator Superfamily 20 352 2.6E-26 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 COP00_15775 7171931ca476b2ac48de6c0181944665 401 Gene3D G3DSA:1.20.1250.20 4 196 1.5E-18 T 13-10-2018 COP00_13105 982a423389002da9d9ba05a63d7f8229 88 SUPERFAMILY SSF101498 1 85 2.22E-21 T 13-10-2018 IPR035890 Anti-sigma-28 factor FlgM superfamily COP00_13105 982a423389002da9d9ba05a63d7f8229 88 TIGRFAM TIGR03824 FlgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM 1 86 2.6E-17 T 13-10-2018 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 COP00_13105 982a423389002da9d9ba05a63d7f8229 88 Pfam PF04316 Anti-sigma-28 factor, FlgM 33 83 9.4E-15 T 13-10-2018 IPR031316 Anti-sigma-28 factor FlgM, C-terminal COP00_07815 400776a809423338340122fd5bfda8fb 301 Gene3D G3DSA:3.60.130.10 3 301 2.5E-83 T 13-10-2018 COP00_07815 400776a809423338340122fd5bfda8fb 301 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 16 281 1.2E-54 T 13-10-2018 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: R-HSA-71262 COP00_07815 400776a809423338340122fd5bfda8fb 301 SUPERFAMILY SSF51197 14 290 1.24E-79 T 13-10-2018 COP00_23490 7329e62fe3efa9d55c8f5b606041859f 569 Gene3D G3DSA:4.10.80.30 57 83 6.7E-53 T 13-10-2018 COP00_23490 7329e62fe3efa9d55c8f5b606041859f 569 Gene3D G3DSA:1.10.530.10 6 154 6.7E-53 T 13-10-2018 COP00_23490 7329e62fe3efa9d55c8f5b606041859f 569 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 12 150 4.2E-24 T 13-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 COP00_23490 7329e62fe3efa9d55c8f5b606041859f 569 Pfam PF06605 Prophage endopeptidase tail 226 549 1.7E-64 T 13-10-2018 IPR010572 Prophage tail endopeptidase COP00_23490 7329e62fe3efa9d55c8f5b606041859f 569 TIGRFAM TIGR01665 put_anti_recept: phage minor structural protein, N-terminal region 260 528 3.4E-8 T 13-10-2018 IPR007119 Phage minor structural protein, N-terminal domain COP00_23490 7329e62fe3efa9d55c8f5b606041859f 569 SMART SM00047 1 154 3.9E-53 T 13-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 COP00_23490 7329e62fe3efa9d55c8f5b606041859f 569 Gene3D G3DSA:3.55.50.40 287 375 1.5E-14 T 13-10-2018 COP00_23490 7329e62fe3efa9d55c8f5b606041859f 569 PRINTS PR01002 Flagellar protein FlgJ signature 111 130 3.1E-7 T 13-10-2018 COP00_23490 7329e62fe3efa9d55c8f5b606041859f 569 PRINTS PR01002 Flagellar protein FlgJ signature 131 149 3.1E-7 T 13-10-2018 COP00_23490 7329e62fe3efa9d55c8f5b606041859f 569 PRINTS PR01002 Flagellar protein FlgJ signature 25 43 3.1E-7 T 13-10-2018 COP00_10880 7a14814ec01796d5bdba1a319624d84a 299 SUPERFAMILY SSF161098 27 299 1.7E-73 T 13-10-2018 IPR035906 MetI-like superfamily COP00_10880 7a14814ec01796d5bdba1a319624d84a 299 Gene3D G3DSA:1.10.3720.10 24 286 3.0E-64 T 13-10-2018 IPR035906 MetI-like superfamily COP00_10880 7a14814ec01796d5bdba1a319624d84a 299 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 97 292 1.2E-14 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 COP00_16000 ff7de4fc2763e170cddf432e52c6d905 488 SMART SM01240 9 474 0.0 T 13-10-2018 COP00_16000 ff7de4fc2763e170cddf432e52c6d905 488 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 10 474 5.1E-169 T 13-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 COP00_16000 ff7de4fc2763e170cddf432e52c6d905 488 Gene3D G3DSA:3.20.20.70 1 487 2.5E-227 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 COP00_16000 ff7de4fc2763e170cddf432e52c6d905 488 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 298 310 - T 13-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 COP00_16000 ff7de4fc2763e170cddf432e52c6d905 488 SMART SM00116 161 209 2.0E-7 T 13-10-2018 IPR000644 CBS domain COP00_16000 ff7de4fc2763e170cddf432e52c6d905 488 SMART SM00116 98 148 4.8E-8 T 13-10-2018 IPR000644 CBS domain COP00_16000 ff7de4fc2763e170cddf432e52c6d905 488 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 10 456 7.3E-207 T 13-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 COP00_16000 ff7de4fc2763e170cddf432e52c6d905 488 SUPERFAMILY SSF51412 5 169 7.96E-31 T 13-10-2018 COP00_16000 ff7de4fc2763e170cddf432e52c6d905 488 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 10 487 86.457 T 13-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 COP00_16000 ff7de4fc2763e170cddf432e52c6d905 488 Pfam PF00571 CBS domain 97 144 4.2E-7 T 13-10-2018 IPR000644 CBS domain COP00_16000 ff7de4fc2763e170cddf432e52c6d905 488 Pfam PF00571 CBS domain 153 204 1.2E-7 T 13-10-2018 IPR000644 CBS domain COP00_16000 ff7de4fc2763e170cddf432e52c6d905 488 PIRSF PIRSF000130 1 488 9.7E-212 T 13-10-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 COP00_16000 ff7de4fc2763e170cddf432e52c6d905 488 SUPERFAMILY SSF51412 143 485 8.9E-126 T 13-10-2018 COP00_00195 1c33574787edd54df17cc690f43530c2 88 SUPERFAMILY SSF55594 1 83 1.96E-28 T 13-10-2018 IPR035895 HPr-like superfamily COP00_00195 1c33574787edd54df17cc690f43530c2 88 PRINTS PR00107 Phosphocarrier protein signature 13 29 1.3E-26 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like COP00_00195 1c33574787edd54df17cc690f43530c2 88 PRINTS PR00107 Phosphocarrier protein signature 38 53 1.3E-26 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like COP00_00195 1c33574787edd54df17cc690f43530c2 88 PRINTS PR00107 Phosphocarrier protein signature 53 70 1.3E-26 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like COP00_00195 1c33574787edd54df17cc690f43530c2 88 Pfam PF00381 PTS HPr component phosphorylation site 3 82 2.0E-30 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like COP00_00195 1c33574787edd54df17cc690f43530c2 88 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 39 54 - T 13-10-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site COP00_00195 1c33574787edd54df17cc690f43530c2 88 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 13-10-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site COP00_00195 1c33574787edd54df17cc690f43530c2 88 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 81 5.0E-33 T 13-10-2018 IPR000032 Phosphocarrier protein HPr-like COP00_00195 1c33574787edd54df17cc690f43530c2 88 Gene3D G3DSA:3.30.1340.10 1 88 9.1E-38 T 13-10-2018 IPR035895 HPr-like superfamily COP00_20725 55f08e044193f963d75b6b97fe051d0a 238 SMART SM00866 90 229 8.9E-32 T 13-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 COP00_20725 55f08e044193f963d75b6b97fe051d0a 238 SUPERFAMILY SSF64288 75 234 6.12E-43 T 13-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily COP00_20725 55f08e044193f963d75b6b97fe051d0a 238 Gene3D G3DSA:3.40.1410.10 88 228 4.7E-32 T 13-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily COP00_20725 55f08e044193f963d75b6b97fe051d0a 238 Gene3D G3DSA:1.10.10.10 1 68 9.2E-19 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_20725 55f08e044193f963d75b6b97fe051d0a 238 Pfam PF00392 Bacterial regulatory proteins, gntR family 6 68 1.6E-16 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 COP00_20725 55f08e044193f963d75b6b97fe051d0a 238 TIGRFAM TIGR02404 trehalos_R_Bsub: trehalose operon repressor 5 236 3.6E-102 T 13-10-2018 IPR012770 Trehalose operon transcriptional repressor COP00_20725 55f08e044193f963d75b6b97fe051d0a 238 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 42 58 1.2E-7 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 COP00_20725 55f08e044193f963d75b6b97fe051d0a 238 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 28 42 1.2E-7 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 COP00_20725 55f08e044193f963d75b6b97fe051d0a 238 Pfam PF07702 UTRA domain 91 229 2.0E-31 T 13-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 COP00_20725 55f08e044193f963d75b6b97fe051d0a 238 SUPERFAMILY SSF46785 3 72 7.86E-19 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_20725 55f08e044193f963d75b6b97fe051d0a 238 SMART SM00345 9 68 3.1E-16 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 COP00_08580 e31c352b37423f80dd91e745044a97e1 421 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 2 409 53.931 T 13-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 COP00_08580 e31c352b37423f80dd91e745044a97e1 421 SUPERFAMILY SSF52540 59 396 1.67E-80 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_08580 e31c352b37423f80dd91e745044a97e1 421 Pfam PF06689 ClpX C4-type zinc finger 12 48 2.6E-20 T 13-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 COP00_08580 e31c352b37423f80dd91e745044a97e1 421 SMART SM00994 10 49 8.0E-24 T 13-10-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 COP00_08580 e31c352b37423f80dd91e745044a97e1 421 SUPERFAMILY SSF57716 11 46 1.71E-11 T 13-10-2018 COP00_08580 e31c352b37423f80dd91e745044a97e1 421 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 1 406 2.0E-217 T 13-10-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 COP00_08580 e31c352b37423f80dd91e745044a97e1 421 SMART SM01086 311 405 3.7E-34 T 13-10-2018 IPR019489 Clp ATPase, C-terminal COP00_08580 e31c352b37423f80dd91e745044a97e1 421 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 311 389 5.9E-18 T 13-10-2018 IPR019489 Clp ATPase, C-terminal COP00_08580 e31c352b37423f80dd91e745044a97e1 421 SMART SM00382 108 259 9.2E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_08580 e31c352b37423f80dd91e745044a97e1 421 Gene3D G3DSA:1.10.8.60 310 418 5.5E-38 T 13-10-2018 COP00_08580 e31c352b37423f80dd91e745044a97e1 421 Gene3D G3DSA:3.30.50.30 3 50 1.0E-21 T 13-10-2018 IPR038366 Zinc finger, ClpX C4-type superfamily COP00_08580 e31c352b37423f80dd91e745044a97e1 421 Gene3D G3DSA:3.40.50.300 53 309 1.3E-107 T 13-10-2018 COP00_08580 e31c352b37423f80dd91e745044a97e1 421 Pfam PF07724 AAA domain (Cdc48 subfamily) 109 305 2.7E-51 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 COP00_19780 29b12a6087b7c0777ac507c2a3ed537b 136 TIGRFAM TIGR01593 holin_tox_secr: toxin secretion/phage lysis holin 9 135 2.3E-27 T 13-10-2018 IPR006480 Bacteriophage holin family COP00_19780 29b12a6087b7c0777ac507c2a3ed537b 136 Pfam PF05105 Bacteriophage holin family 15 131 1.4E-36 T 13-10-2018 IPR006480 Bacteriophage holin family COP00_03350 29b12a6087b7c0777ac507c2a3ed537b 136 TIGRFAM TIGR01593 holin_tox_secr: toxin secretion/phage lysis holin 9 135 2.3E-27 T 13-10-2018 IPR006480 Bacteriophage holin family COP00_03350 29b12a6087b7c0777ac507c2a3ed537b 136 Pfam PF05105 Bacteriophage holin family 15 131 1.4E-36 T 13-10-2018 IPR006480 Bacteriophage holin family COP00_21045 f6cf984e2bc7d7381f4dab35130cc539 281 Gene3D G3DSA:1.10.10.60 174 225 7.6E-16 T 13-10-2018 COP00_21045 f6cf984e2bc7d7381f4dab35130cc539 281 SMART SM00342 192 275 4.2E-30 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 COP00_21045 f6cf984e2bc7d7381f4dab35130cc539 281 Pfam PF02311 AraC-like ligand binding domain 28 153 1.3E-13 T 13-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 COP00_21045 f6cf984e2bc7d7381f4dab35130cc539 281 SUPERFAMILY SSF46689 228 278 1.97E-12 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 COP00_21045 f6cf984e2bc7d7381f4dab35130cc539 281 Gene3D G3DSA:2.60.120.10 11 94 2.5E-10 T 13-10-2018 IPR014710 RmlC-like jelly roll fold COP00_21045 f6cf984e2bc7d7381f4dab35130cc539 281 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 229 271 - T 13-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 COP00_21045 f6cf984e2bc7d7381f4dab35130cc539 281 Pfam PF12833 Helix-turn-helix domain 198 276 2.0E-23 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 COP00_21045 f6cf984e2bc7d7381f4dab35130cc539 281 Gene3D G3DSA:1.10.10.60 226 280 8.5E-17 T 13-10-2018 COP00_21045 f6cf984e2bc7d7381f4dab35130cc539 281 SUPERFAMILY SSF51215 26 158 2.09E-19 T 13-10-2018 IPR037923 Transcription regulator HTH-like COP00_21045 f6cf984e2bc7d7381f4dab35130cc539 281 SUPERFAMILY SSF46689 175 226 1.7E-8 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 COP00_19350 d66a9efe36f040510126f2f97e88b1b1 286 Pfam PF11738 Protein of unknown function (DUF3298) 191 271 1.9E-19 T 13-10-2018 IPR021729 Domain of unknown function DUF3298 COP00_19350 d66a9efe36f040510126f2f97e88b1b1 286 Gene3D G3DSA:3.30.565.40 77 187 2.5E-29 T 13-10-2018 COP00_19350 d66a9efe36f040510126f2f97e88b1b1 286 Pfam PF13739 Domain of unknown function (DUF4163) 86 161 5.7E-7 T 13-10-2018 IPR025303 Deacetylase PdaC COP00_19350 d66a9efe36f040510126f2f97e88b1b1 286 Gene3D G3DSA:3.90.640.20 188 286 4.9E-41 T 13-10-2018 IPR037126 PdaC/RsiV-like superfamily COP00_06345 262af7f1820d22e484ac3db37b8bd914 260 Gene3D G3DSA:3.40.50.720 1 257 1.0E-69 T 13-10-2018 COP00_06345 262af7f1820d22e484ac3db37b8bd914 260 PIRSF PIRSF000126 2 259 1.4E-53 T 13-10-2018 COP00_06345 262af7f1820d22e484ac3db37b8bd914 260 Pfam PF00106 short chain dehydrogenase 8 194 3.8E-55 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_06345 262af7f1820d22e484ac3db37b8bd914 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 4.2E-13 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_06345 262af7f1820d22e484ac3db37b8bd914 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 4.2E-13 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_06345 262af7f1820d22e484ac3db37b8bd914 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 4.2E-13 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_06345 262af7f1820d22e484ac3db37b8bd914 260 SUPERFAMILY SSF51735 3 251 1.45E-70 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily COP00_06345 262af7f1820d22e484ac3db37b8bd914 260 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 COP00_06345 262af7f1820d22e484ac3db37b8bd914 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 6.7E-28 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_06345 262af7f1820d22e484ac3db37b8bd914 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 6.7E-28 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_06345 262af7f1820d22e484ac3db37b8bd914 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 6.7E-28 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_06345 262af7f1820d22e484ac3db37b8bd914 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 6.7E-28 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_06345 262af7f1820d22e484ac3db37b8bd914 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 6.7E-28 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_01530 14102b13036d4260a2685c68a76db8c5 383 PIRSF PIRSF006205 1 383 6.0E-163 T 13-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 COP00_01530 14102b13036d4260a2685c68a76db8c5 383 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1 379 1.5E-178 T 13-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 COP00_01530 14102b13036d4260a2685c68a76db8c5 383 SUPERFAMILY SSF69055 290 381 1.96E-30 T 13-10-2018 IPR036169 DXP reductoisomerase, C-terminal domain superfamily KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 COP00_01530 14102b13036d4260a2685c68a76db8c5 383 SUPERFAMILY SSF51735 2 148 1.09E-44 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily COP00_01530 14102b13036d4260a2685c68a76db8c5 383 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 4 130 5.4E-43 T 13-10-2018 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 COP00_01530 14102b13036d4260a2685c68a76db8c5 383 Gene3D G3DSA:1.10.1740.10 301 383 4.8E-29 T 13-10-2018 COP00_01530 14102b13036d4260a2685c68a76db8c5 383 Gene3D G3DSA:3.40.50.720 1 148 7.9E-50 T 13-10-2018 COP00_01530 14102b13036d4260a2685c68a76db8c5 383 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 144 227 2.5E-42 T 13-10-2018 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 COP00_01530 14102b13036d4260a2685c68a76db8c5 383 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 4 381 47.028 T 13-10-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 COP00_01530 14102b13036d4260a2685c68a76db8c5 383 Pfam PF13288 DXP reductoisomerase C-terminal domain 259 376 2.1E-43 T 13-10-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00900+1.1.1.267|MetaCyc: PWY-7560 COP00_01530 14102b13036d4260a2685c68a76db8c5 383 SUPERFAMILY SSF55347 125 262 9.16E-61 T 13-10-2018 COP00_06505 8d873aa7c075f9f7b9fb4721cacaceb6 473 Gene3D G3DSA:3.50.50.60 159 281 5.5E-113 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily COP00_06505 8d873aa7c075f9f7b9fb4721cacaceb6 473 SUPERFAMILY SSF51905 2 345 9.33E-59 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily COP00_06505 8d873aa7c075f9f7b9fb4721cacaceb6 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 147 156 3.7E-68 T 13-10-2018 COP00_06505 8d873aa7c075f9f7b9fb4721cacaceb6 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 437 457 3.7E-68 T 13-10-2018 COP00_06505 8d873aa7c075f9f7b9fb4721cacaceb6 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 183 208 3.7E-68 T 13-10-2018 COP00_06505 8d873aa7c075f9f7b9fb4721cacaceb6 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 314 321 3.7E-68 T 13-10-2018 COP00_06505 8d873aa7c075f9f7b9fb4721cacaceb6 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 272 286 3.7E-68 T 13-10-2018 COP00_06505 8d873aa7c075f9f7b9fb4721cacaceb6 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 350 371 3.7E-68 T 13-10-2018 COP00_06505 8d873aa7c075f9f7b9fb4721cacaceb6 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 3.7E-68 T 13-10-2018 COP00_06505 8d873aa7c075f9f7b9fb4721cacaceb6 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 38 53 3.7E-68 T 13-10-2018 COP00_06505 8d873aa7c075f9f7b9fb4721cacaceb6 473 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 415 430 3.7E-68 T 13-10-2018 COP00_06505 8d873aa7c075f9f7b9fb4721cacaceb6 473 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 354 462 9.8E-38 T 13-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 COP00_06505 8d873aa7c075f9f7b9fb4721cacaceb6 473 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 183 201 2.8E-36 T 13-10-2018 COP00_06505 8d873aa7c075f9f7b9fb4721cacaceb6 473 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 2.8E-36 T 13-10-2018 COP00_06505 8d873aa7c075f9f7b9fb4721cacaceb6 473 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 271 287 2.8E-36 T 13-10-2018 COP00_06505 8d873aa7c075f9f7b9fb4721cacaceb6 473 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 144 162 2.8E-36 T 13-10-2018 COP00_06505 8d873aa7c075f9f7b9fb4721cacaceb6 473 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 299 321 2.8E-36 T 13-10-2018 COP00_06505 8d873aa7c075f9f7b9fb4721cacaceb6 473 Gene3D G3DSA:3.50.50.60 5 340 5.5E-113 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily COP00_06505 8d873aa7c075f9f7b9fb4721cacaceb6 473 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 4 473 2.5E-181 T 13-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 COP00_06505 8d873aa7c075f9f7b9fb4721cacaceb6 473 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 39 49 - T 13-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 COP00_06505 8d873aa7c075f9f7b9fb4721cacaceb6 473 Gene3D G3DSA:3.30.390.30 353 473 2.5E-46 T 13-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 COP00_06505 8d873aa7c075f9f7b9fb4721cacaceb6 473 SUPERFAMILY SSF55424 350 472 8.59E-41 T 13-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 COP00_06505 8d873aa7c075f9f7b9fb4721cacaceb6 473 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 334 3.6E-64 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 COP00_06505 8d873aa7c075f9f7b9fb4721cacaceb6 473 PIRSF PIRSF000350 1 471 1.2E-83 T 13-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 COP00_09490 8658e82d33b9287760fa5f868195037b 73 SMART SM00420 11 56 0.0047 T 13-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 COP00_09490 8658e82d33b9287760fa5f868195037b 73 Pfam PF08220 DeoR-like helix-turn-helix domain 11 53 1.9E-8 T 13-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 COP00_09490 8658e82d33b9287760fa5f868195037b 73 Gene3D G3DSA:1.10.10.10 10 71 8.8E-6 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_09490 8658e82d33b9287760fa5f868195037b 73 SUPERFAMILY SSF46785 11 59 4.05E-8 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_15440 8691c6bafeb3164e0e082730ce99c671 420 PRINTS PR00181 Maltose binding protein signature 247 266 4.8E-7 T 13-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 COP00_15440 8691c6bafeb3164e0e082730ce99c671 420 PRINTS PR00181 Maltose binding protein signature 137 156 4.8E-7 T 13-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 COP00_15440 8691c6bafeb3164e0e082730ce99c671 420 PRINTS PR00181 Maltose binding protein signature 372 391 4.8E-7 T 13-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 COP00_15440 8691c6bafeb3164e0e082730ce99c671 420 PRINTS PR00181 Maltose binding protein signature 77 95 4.8E-7 T 13-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 COP00_15440 8691c6bafeb3164e0e082730ce99c671 420 Gene3D G3DSA:3.40.190.10 146 405 9.9E-107 T 13-10-2018 COP00_15440 8691c6bafeb3164e0e082730ce99c671 420 SUPERFAMILY SSF53850 39 409 3.09E-86 T 13-10-2018 COP00_15440 8691c6bafeb3164e0e082730ce99c671 420 Gene3D G3DSA:3.40.190.10 54 372 9.9E-107 T 13-10-2018 COP00_15440 8691c6bafeb3164e0e082730ce99c671 420 Pfam PF13416 Bacterial extracellular solute-binding protein 54 359 4.3E-52 T 13-10-2018 IPR006059 Bacterial extracellular solute-binding protein COP00_21820 79d4350d5b0e3c9d5ae151d692816558 96 Pfam PF17453 Sigma-M inhibitor protein 1 96 1.8E-57 T 13-10-2018 IPR020496 Probable anti-sigma M factor YhdK COP00_21820 79d4350d5b0e3c9d5ae151d692816558 96 ProDom PD065873 YHDK TRANSCRIPTION ANTI-SIGMA-M REPRESSOR TRANSMEMBRANE MEMBRANE PROBABLE REGULATION FACTOR 1 96 3.0E-46 T 13-10-2018 IPR020496 Probable anti-sigma M factor YhdK COP00_04385 efffcb0c518a2f59043b1e7c18d219c4 475 Gene3D G3DSA:1.20.1250.20 260 469 5.0E-21 T 13-10-2018 COP00_04385 efffcb0c518a2f59043b1e7c18d219c4 475 Pfam PF07690 Major Facilitator Superfamily 15 407 2.8E-37 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 COP00_04385 efffcb0c518a2f59043b1e7c18d219c4 475 PRINTS PR01036 Tetracycline resistance protein TetB signature 134 158 1.9E-7 T 13-10-2018 COP00_04385 efffcb0c518a2f59043b1e7c18d219c4 475 PRINTS PR01036 Tetracycline resistance protein TetB signature 13 37 1.9E-7 T 13-10-2018 COP00_04385 efffcb0c518a2f59043b1e7c18d219c4 475 PRINTS PR01036 Tetracycline resistance protein TetB signature 104 124 1.9E-7 T 13-10-2018 COP00_04385 efffcb0c518a2f59043b1e7c18d219c4 475 SUPERFAMILY SSF103473 8 467 2.96E-56 T 13-10-2018 IPR036259 MFS transporter superfamily COP00_04385 efffcb0c518a2f59043b1e7c18d219c4 475 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 11 448 3.7E-96 T 13-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 COP00_04385 efffcb0c518a2f59043b1e7c18d219c4 475 Gene3D G3DSA:1.20.1720.10 10 236 1.6E-34 T 13-10-2018 COP00_01950 8554195cfa1a55c9b0f25b262079da59 431 SUPERFAMILY SSF48208 41 429 1.36E-71 T 13-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 COP00_01950 8554195cfa1a55c9b0f25b262079da59 431 Gene3D G3DSA:1.50.10.10 22 431 2.2E-87 T 13-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 COP00_01950 8554195cfa1a55c9b0f25b262079da59 431 Pfam PF01270 Glycosyl hydrolases family 8 81 422 3.5E-24 T 13-10-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 COP00_16770 01e275634f706a8d1a479acdbfd16816 60 SUPERFAMILY SSF55129 1 58 5.36E-21 T 13-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily COP00_16770 01e275634f706a8d1a479acdbfd16816 60 Pfam PF00327 Ribosomal protein L30p/L7e 5 54 3.9E-20 T 13-10-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain COP00_16770 01e275634f706a8d1a479acdbfd16816 60 ProSitePatterns PS00634 Ribosomal protein L30 signature. 22 54 - T 13-10-2018 IPR018038 Ribosomal protein L30, conserved site COP00_16770 01e275634f706a8d1a479acdbfd16816 60 Gene3D G3DSA:3.30.1390.20 1 58 2.6E-27 T 13-10-2018 IPR036919 Ribosomal protein L30, ferredoxin-like fold domain superfamily COP00_16770 01e275634f706a8d1a479acdbfd16816 60 PIRSF PIRSF002211 1 60 1.8E-28 T 13-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_16770 01e275634f706a8d1a479acdbfd16816 60 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 4 58 9.8E-26 T 13-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_16770 01e275634f706a8d1a479acdbfd16816 60 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 1 58 19.512 T 13-10-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_05825 66ab606742861a095e4efd4c982b6ecd 251 SUPERFAMILY SSF54106 202 249 1.44E-6 T 13-10-2018 COP00_05825 66ab606742861a095e4efd4c982b6ecd 251 Gene3D G3DSA:3.10.350.10 191 251 1.2E-11 T 13-10-2018 IPR036779 LysM domain superfamily COP00_05825 66ab606742861a095e4efd4c982b6ecd 251 SMART SM00257 203 249 3.3E-9 T 13-10-2018 IPR018392 LysM domain COP00_05825 66ab606742861a095e4efd4c982b6ecd 251 Pfam PF01476 LysM domain 204 249 3.3E-9 T 13-10-2018 IPR018392 LysM domain COP00_23720 001481a04c56b7acfda0c69cddfdfc1a 340 Gene3D G3DSA:3.40.190.10 38 306 7.0E-135 T 13-10-2018 COP00_23720 001481a04c56b7acfda0c69cddfdfc1a 340 ProSitePatterns PS00757 Prokaryotic sulfate-binding proteins signature 2. 156 164 - T 13-10-2018 IPR034408 Sulphate/thiosulphate-binding site GO:1901681 COP00_23720 001481a04c56b7acfda0c69cddfdfc1a 340 Pfam PF13531 Bacterial extracellular solute-binding protein 44 291 1.6E-45 T 13-10-2018 COP00_23720 001481a04c56b7acfda0c69cddfdfc1a 340 TIGRFAM TIGR00971 3a0106s03: sulfate ABC transporter, sulfate-binding protein 32 337 2.1E-150 T 13-10-2018 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 COP00_23720 001481a04c56b7acfda0c69cddfdfc1a 340 Gene3D G3DSA:3.40.190.10 125 336 7.0E-135 T 13-10-2018 COP00_23720 001481a04c56b7acfda0c69cddfdfc1a 340 SUPERFAMILY SSF53850 33 339 1.98E-90 T 13-10-2018 COP00_11400 42fc317667d4a71af80981225c99cce0 273 Gene3D G3DSA:1.10.3720.10 2 261 5.4E-62 T 13-10-2018 IPR035906 MetI-like superfamily COP00_11400 42fc317667d4a71af80981225c99cce0 273 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 87 267 2.0E-19 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 COP00_11400 42fc317667d4a71af80981225c99cce0 273 SUPERFAMILY SSF161098 5 273 3.36E-70 T 13-10-2018 IPR035906 MetI-like superfamily COP00_04080 9f6d5e6ba4a5453f26db1a20fc1b63fd 204 Gene3D G3DSA:1.10.287.990 21 91 2.3E-32 T 13-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 COP00_04080 9f6d5e6ba4a5453f26db1a20fc1b63fd 204 PIRSF PIRSF000349 1 204 1.3E-84 T 13-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 COP00_04080 9f6d5e6ba4a5453f26db1a20fc1b63fd 204 SUPERFAMILY SSF46609 3 92 2.88E-37 T 13-10-2018 IPR036324 Manganese/iron superoxide dismutase, N-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 COP00_04080 9f6d5e6ba4a5453f26db1a20fc1b63fd 204 PRINTS PR01703 Manganese superoxide dismutase signature 163 175 1.5E-26 T 13-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 COP00_04080 9f6d5e6ba4a5453f26db1a20fc1b63fd 204 PRINTS PR01703 Manganese superoxide dismutase signature 127 135 1.5E-26 T 13-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 COP00_04080 9f6d5e6ba4a5453f26db1a20fc1b63fd 204 PRINTS PR01703 Manganese superoxide dismutase signature 7 18 1.5E-26 T 13-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 COP00_04080 9f6d5e6ba4a5453f26db1a20fc1b63fd 204 PRINTS PR01703 Manganese superoxide dismutase signature 28 41 1.5E-26 T 13-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 COP00_04080 9f6d5e6ba4a5453f26db1a20fc1b63fd 204 PRINTS PR01703 Manganese superoxide dismutase signature 74 87 1.5E-26 T 13-10-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 COP00_04080 9f6d5e6ba4a5453f26db1a20fc1b63fd 204 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 3 91 8.6E-32 T 13-10-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 COP00_04080 9f6d5e6ba4a5453f26db1a20fc1b63fd 204 Gene3D G3DSA:2.40.500.20 92 204 2.2E-51 T 13-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 COP00_04080 9f6d5e6ba4a5453f26db1a20fc1b63fd 204 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 98 197 1.9E-43 T 13-10-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 COP00_04080 9f6d5e6ba4a5453f26db1a20fc1b63fd 204 SUPERFAMILY SSF54719 93 203 1.83E-48 T 13-10-2018 IPR036314 Manganese/iron superoxide dismutase, C-terminal domain superfamily MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 COP00_04080 9f6d5e6ba4a5453f26db1a20fc1b63fd 204 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 165 172 - T 13-10-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803|Reactome: R-HSA-8950505 COP00_01910 1414c27c4afdb365e83b0efecf8c0c57 333 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 11 328 9.9E-75 T 13-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 COP00_01910 1414c27c4afdb365e83b0efecf8c0c57 333 Gene3D G3DSA:3.20.20.70 7 333 6.4E-118 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 COP00_01910 1414c27c4afdb365e83b0efecf8c0c57 333 SUPERFAMILY SSF51395 8 329 1.02E-107 T 13-10-2018 COP00_22365 ce753130c8237c741044ce5149a507f1 171 Gene3D G3DSA:2.10.109.10 53 170 2.2E-39 T 13-10-2018 COP00_22365 ce753130c8237c741044ce5149a507f1 171 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 23 39 6.9E-18 T 13-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 COP00_22365 ce753130c8237c741044ce5149a507f1 171 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 131 150 6.9E-18 T 13-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 COP00_22365 ce753130c8237c741044ce5149a507f1 171 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 73 85 6.9E-18 T 13-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 COP00_22365 ce753130c8237c741044ce5149a507f1 171 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 10 165 1.0E-44 T 13-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 COP00_22365 ce753130c8237c741044ce5149a507f1 171 ProSitePatterns PS00760 Signal peptidases I lysine active site. 75 87 - T 13-10-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 COP00_22365 ce753130c8237c741044ce5149a507f1 171 SUPERFAMILY SSF51306 24 167 1.6E-44 T 13-10-2018 IPR036286 LexA/Signal peptidase-like superfamily COP00_22365 ce753130c8237c741044ce5149a507f1 171 Pfam PF00717 Peptidase S24-like 29 97 8.3E-17 T 13-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C COP00_22365 ce753130c8237c741044ce5149a507f1 171 ProSitePatterns PS00761 Signal peptidases I signature 3. 136 149 - T 13-10-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 COP00_22565 51ab45e366be70f4e2a7d39b93269099 287 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 248 263 5.1E-5 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 COP00_22565 51ab45e366be70f4e2a7d39b93269099 287 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 263 279 5.1E-5 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 COP00_22565 51ab45e366be70f4e2a7d39b93269099 287 Pfam PF12833 Helix-turn-helix domain 202 280 5.9E-20 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 COP00_22565 51ab45e366be70f4e2a7d39b93269099 287 SUPERFAMILY SSF46689 182 229 2.46E-7 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 COP00_22565 51ab45e366be70f4e2a7d39b93269099 287 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 233 275 - T 13-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 COP00_22565 51ab45e366be70f4e2a7d39b93269099 287 Gene3D G3DSA:1.10.10.2730 234 280 9.4E-18 T 13-10-2018 COP00_22565 51ab45e366be70f4e2a7d39b93269099 287 Gene3D G3DSA:1.10.10.60 178 233 8.4E-11 T 13-10-2018 COP00_22565 51ab45e366be70f4e2a7d39b93269099 287 SUPERFAMILY SSF46689 233 280 3.32E-11 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 COP00_22565 51ab45e366be70f4e2a7d39b93269099 287 SUPERFAMILY SSF51215 9 170 1.44E-19 T 13-10-2018 IPR037923 Transcription regulator HTH-like COP00_22565 51ab45e366be70f4e2a7d39b93269099 287 SMART SM00342 196 279 1.6E-26 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 COP00_22565 51ab45e366be70f4e2a7d39b93269099 287 Pfam PF02311 AraC-like ligand binding domain 36 94 3.9E-6 T 13-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 COP00_02890 9a7d51c19cffd92fe6e83104106ea00d 489 SUPERFAMILY SSF52540 203 379 1.92E-6 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_02890 9a7d51c19cffd92fe6e83104106ea00d 489 Pfam PF03796 DnaB-like helicase C terminal domain 198 380 1.8E-10 T 13-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 COP00_02890 9a7d51c19cffd92fe6e83104106ea00d 489 Gene3D G3DSA:3.40.50.300 180 480 2.5E-26 T 13-10-2018 COP00_07390 2c31e8cad51353c5a92c1d20bfc591cf 251 Pfam PF13649 Methyltransferase domain 40 136 1.3E-23 T 13-10-2018 COP00_07390 2c31e8cad51353c5a92c1d20bfc591cf 251 Gene3D G3DSA:2.20.25.110 144 205 8.2E-83 T 13-10-2018 COP00_07390 2c31e8cad51353c5a92c1d20bfc591cf 251 Gene3D G3DSA:3.40.50.150 6 244 8.2E-83 T 13-10-2018 COP00_07390 2c31e8cad51353c5a92c1d20bfc591cf 251 SUPERFAMILY SSF53335 3 246 2.26E-54 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase COP00_04495 7ab95fce3c51c068838e3141eeddc057 238 Pfam PF00753 Metallo-beta-lactamase superfamily 19 212 2.6E-29 T 13-10-2018 IPR001279 Metallo-beta-lactamase COP00_04495 7ab95fce3c51c068838e3141eeddc057 238 Gene3D G3DSA:3.60.15.10 5 237 4.6E-42 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like COP00_04495 7ab95fce3c51c068838e3141eeddc057 238 SUPERFAMILY SSF56281 7 220 7.6E-44 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like COP00_04495 7ab95fce3c51c068838e3141eeddc057 238 SMART SM00849 20 212 1.1E-35 T 13-10-2018 IPR001279 Metallo-beta-lactamase COP00_03725 f0d77b10245a3d7388d567d9176b72f3 474 Hamap MF_00519 L-arabinose isomerase [araA]. 1 474 61.34 T 13-10-2018 IPR003762 L-arabinose isomerase GO:0008733 KEGG: 00040+5.3.1.4 COP00_03725 f0d77b10245a3d7388d567d9176b72f3 474 SUPERFAMILY SSF53743 1 327 3.92E-124 T 13-10-2018 IPR009015 L-fucose isomerase, N-terminal/central domain superfamily GO:0005737|GO:0005996|GO:0016861 COP00_03725 f0d77b10245a3d7388d567d9176b72f3 474 SUPERFAMILY SSF50443 327 474 8.89E-58 T 13-10-2018 IPR004216 L-fucose/L-arabinose isomerase, C-terminal COP00_03725 f0d77b10245a3d7388d567d9176b72f3 474 Pfam PF11762 L-arabinose isomerase C-terminal domain 360 473 5.1E-43 T 13-10-2018 IPR024664 L-arabinose isomerase, C-terminal KEGG: 00040+5.3.1.4 COP00_03725 f0d77b10245a3d7388d567d9176b72f3 474 ProDom PD018364 ISOMERASE L-ARABINOSE ARABINOSE METABOLISM CARBOHYDRATE CATABOLISM ARAA 6 303 2.0E-172 T 13-10-2018 IPR003762 L-arabinose isomerase GO:0008733 KEGG: 00040+5.3.1.4 COP00_03725 f0d77b10245a3d7388d567d9176b72f3 474 Pfam PF02610 L-arabinose isomerase 6 357 3.3E-170 T 13-10-2018 IPR003762 L-arabinose isomerase GO:0008733 KEGG: 00040+5.3.1.4 COP00_03725 f0d77b10245a3d7388d567d9176b72f3 474 PIRSF PIRSF001478 1 474 2.2E-241 T 13-10-2018 IPR003762 L-arabinose isomerase GO:0008733 KEGG: 00040+5.3.1.4 COP00_03725 f0d77b10245a3d7388d567d9176b72f3 474 Gene3D G3DSA:3.40.50.10940 1 175 4.6E-86 T 13-10-2018 IPR038583 L-arabinose isomerase, N-terminal domain superfamily KEGG: 00040+5.3.1.4 COP00_09360 1c6e3554dd5191622b843b0c4fb32f56 334 Gene3D G3DSA:3.40.50.2300 64 311 5.6E-93 T 13-10-2018 COP00_09360 1c6e3554dd5191622b843b0c4fb32f56 334 SUPERFAMILY SSF53822 63 333 4.91E-86 T 13-10-2018 IPR028082 Periplasmic binding protein-like I COP00_09360 1c6e3554dd5191622b843b0c4fb32f56 334 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 15 25 4.4E-6 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 COP00_09360 1c6e3554dd5191622b843b0c4fb32f56 334 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 5 15 4.4E-6 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 COP00_09360 1c6e3554dd5191622b843b0c4fb32f56 334 TIGRFAM TIGR01481 ccpA: catabolite control protein A 3 333 2.0E-158 T 13-10-2018 IPR006377 Catabolite control protein A GO:0006355 COP00_09360 1c6e3554dd5191622b843b0c4fb32f56 334 Pfam PF13377 Periplasmic binding protein-like domain 173 332 4.1E-35 T 13-10-2018 COP00_09360 1c6e3554dd5191622b843b0c4fb32f56 334 Pfam PF00356 Bacterial regulatory proteins, lacI family 5 50 1.1E-19 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 COP00_09360 1c6e3554dd5191622b843b0c4fb32f56 334 SMART SM00354 3 73 2.8E-39 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 COP00_09360 1c6e3554dd5191622b843b0c4fb32f56 334 ProSitePatterns PS00356 LacI-type HTH domain signature. 6 24 - T 13-10-2018 COP00_09360 1c6e3554dd5191622b843b0c4fb32f56 334 SUPERFAMILY SSF47413 2 61 5.63E-20 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 COP00_09360 1c6e3554dd5191622b843b0c4fb32f56 334 Gene3D G3DSA:1.10.260.40 2 61 8.1E-29 T 13-10-2018 COP00_09360 1c6e3554dd5191622b843b0c4fb32f56 334 Gene3D G3DSA:3.40.50.2300 162 292 5.6E-93 T 13-10-2018 COP00_20535 5d6280c596481a142811a4620344ca80 554 Pfam PF01926 50S ribosome-binding GTPase 11 105 6.7E-11 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 COP00_20535 5d6280c596481a142811a4620344ca80 554 SUPERFAMILY SSF52540 6 147 1.09E-14 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_20535 5d6280c596481a142811a4620344ca80 554 Pfam PF07670 Nucleoside recognition 265 352 5.3E-7 T 13-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 COP00_20535 5d6280c596481a142811a4620344ca80 554 Gene3D G3DSA:3.40.50.300 9 166 8.9E-14 T 13-10-2018 COP00_19985 7fc74f85b53b0898fe8ea3114c7258c8 210 PIRSF PIRSF006324 1 210 3.9E-61 T 13-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 COP00_19985 7fc74f85b53b0898fe8ea3114c7258c8 210 Pfam PF01810 LysE type translocator 13 206 2.1E-31 T 13-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 COP00_19985 7fc74f85b53b0898fe8ea3114c7258c8 210 TIGRFAM TIGR00949 2A76: homoserine/Threonine efflux protein 17 207 2.6E-61 T 13-10-2018 IPR004778 Homoserine/Threonine efflux protein GO:0016021 COP00_00555 95b1b9c7f6e336f6c3bcb7c96a5b5e60 325 SMART SM00861 4 179 3.1E-63 T 13-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain COP00_00555 95b1b9c7f6e336f6c3bcb7c96a5b5e60 325 Gene3D G3DSA:3.40.50.920 193 325 1.9E-48 T 13-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 COP00_00555 95b1b9c7f6e336f6c3bcb7c96a5b5e60 325 Pfam PF02779 Transketolase, pyrimidine binding domain 3 178 4.6E-41 T 13-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain COP00_00555 95b1b9c7f6e336f6c3bcb7c96a5b5e60 325 SUPERFAMILY SSF52518 2 204 6.48E-67 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold COP00_00555 95b1b9c7f6e336f6c3bcb7c96a5b5e60 325 Gene3D G3DSA:3.40.50.970 1 192 3.1E-81 T 13-10-2018 COP00_00555 95b1b9c7f6e336f6c3bcb7c96a5b5e60 325 SUPERFAMILY SSF52922 188 325 2.75E-42 T 13-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 COP00_00555 95b1b9c7f6e336f6c3bcb7c96a5b5e60 325 Pfam PF02780 Transketolase, C-terminal domain 194 313 1.0E-39 T 13-10-2018 IPR033248 Transketolase, C-terminal domain COP00_11025 5bd0a0dfc2a3ff153a2f44901e175beb 594 SUPERFAMILY SSF47203 250 422 5.15E-41 T 13-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 COP00_11025 5bd0a0dfc2a3ff153a2f44901e175beb 594 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 31 143 4.8E-28 T 13-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 COP00_11025 5bd0a0dfc2a3ff153a2f44901e175beb 594 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 252 415 1.2E-34 T 13-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 COP00_11025 5bd0a0dfc2a3ff153a2f44901e175beb 594 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 147 240 2.3E-22 T 13-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 COP00_11025 5bd0a0dfc2a3ff153a2f44901e175beb 594 Gene3D G3DSA:1.10.540.10 1 145 3.4E-43 T 13-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 COP00_11025 5bd0a0dfc2a3ff153a2f44901e175beb 594 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 378 397 - T 13-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 COP00_11025 5bd0a0dfc2a3ff153a2f44901e175beb 594 Gene3D G3DSA:2.40.110.10 146 251 2.7E-35 T 13-10-2018 COP00_11025 5bd0a0dfc2a3ff153a2f44901e175beb 594 SUPERFAMILY SSF56645 22 263 7.59E-74 T 13-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 COP00_11025 5bd0a0dfc2a3ff153a2f44901e175beb 594 Gene3D G3DSA:1.20.140.10 252 422 4.3E-50 T 13-10-2018 COP00_11025 5bd0a0dfc2a3ff153a2f44901e175beb 594 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 149 161 - T 13-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 COP00_11025 5bd0a0dfc2a3ff153a2f44901e175beb 594 Gene3D G3DSA:1.20.140.10 423 594 3.8E-54 T 13-10-2018 COP00_14960 88e21ef6b83658d04e22a8d12e5454bd 473 PRINTS PR00344 Bacterial sensor protein C-terminal signature 428 446 1.6E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 COP00_14960 88e21ef6b83658d04e22a8d12e5454bd 473 PRINTS PR00344 Bacterial sensor protein C-terminal signature 452 465 1.6E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 COP00_14960 88e21ef6b83658d04e22a8d12e5454bd 473 PRINTS PR00344 Bacterial sensor protein C-terminal signature 394 408 1.6E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 COP00_14960 88e21ef6b83658d04e22a8d12e5454bd 473 PRINTS PR00344 Bacterial sensor protein C-terminal signature 412 422 1.6E-12 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 COP00_14960 88e21ef6b83658d04e22a8d12e5454bd 473 SUPERFAMILY SSF55874 303 464 7.47E-35 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily COP00_14960 88e21ef6b83658d04e22a8d12e5454bd 473 SUPERFAMILY SSF47384 225 309 4.12E-14 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 COP00_14960 88e21ef6b83658d04e22a8d12e5454bd 473 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 357 463 4.3E-21 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase COP00_14960 88e21ef6b83658d04e22a8d12e5454bd 473 Gene3D G3DSA:1.10.287.130 233 308 1.6E-13 T 13-10-2018 COP00_14960 88e21ef6b83658d04e22a8d12e5454bd 473 Gene3D G3DSA:3.30.565.10 314 469 1.9E-35 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily COP00_14960 88e21ef6b83658d04e22a8d12e5454bd 473 SMART SM00387 356 468 1.5E-29 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase COP00_14960 88e21ef6b83658d04e22a8d12e5454bd 473 Pfam PF00512 His Kinase A (phospho-acceptor) domain 243 301 1.4E-9 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 COP00_14960 88e21ef6b83658d04e22a8d12e5454bd 473 SMART SM00388 242 310 7.9E-12 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 COP00_19060 4c3c01e7cf62df1eaf952d2442b0e726 274 SUPERFAMILY SSF52091 150 244 4.12E-16 T 13-10-2018 IPR036513 STAS domain superfamily COP00_19060 4c3c01e7cf62df1eaf952d2442b0e726 274 Pfam PF01740 STAS domain 155 255 3.0E-14 T 13-10-2018 IPR002645 STAS domain COP00_19060 4c3c01e7cf62df1eaf952d2442b0e726 274 ProDom PD936484 POLYPROTEIN GLYCOPROTEIN M G2 TRANSMEMBRANE NONSTRUCTURAL MEMBRANE CONTAINS: PRECURSOR SIGNAL 28 135 1.0E-43 T 13-10-2018 COP00_19060 4c3c01e7cf62df1eaf952d2442b0e726 274 Pfam PF08678 Rsbr N terminal 10 136 3.5E-36 T 13-10-2018 IPR014792 RsbS co-antagonist protein RsbRA N-terminal domain COP00_19060 4c3c01e7cf62df1eaf952d2442b0e726 274 Gene3D G3DSA:3.30.750.24 148 268 3.5E-39 T 13-10-2018 IPR036513 STAS domain superfamily COP00_19060 4c3c01e7cf62df1eaf952d2442b0e726 274 Gene3D G3DSA:1.10.490.10 1 136 1.8E-31 T 13-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 COP00_22850 9c2d27c0f63e4cf4485520f09cf721d7 311 SUPERFAMILY SSF161098 89 291 1.34E-17 T 13-10-2018 IPR035906 MetI-like superfamily COP00_22850 9c2d27c0f63e4cf4485520f09cf721d7 311 Gene3D G3DSA:1.10.3720.10 84 299 2.0E-18 T 13-10-2018 IPR035906 MetI-like superfamily COP00_22850 9c2d27c0f63e4cf4485520f09cf721d7 311 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 303 2.7E-42 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 COP00_00415 7ae8ff72cae493dbc86717445e1e6f5a 585 SMART SM00382 361 562 1.0E-12 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_00415 7ae8ff72cae493dbc86717445e1e6f5a 585 Gene3D G3DSA:1.20.1560.10 1 321 1.9E-90 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 COP00_00415 7ae8ff72cae493dbc86717445e1e6f5a 585 SUPERFAMILY SSF90123 5 317 9.42E-82 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 COP00_00415 7ae8ff72cae493dbc86717445e1e6f5a 585 Pfam PF00664 ABC transporter transmembrane region 21 288 6.3E-47 T 13-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 COP00_00415 7ae8ff72cae493dbc86717445e1e6f5a 585 Pfam PF00005 ABC transporter 352 501 1.7E-33 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 COP00_00415 7ae8ff72cae493dbc86717445e1e6f5a 585 ProSitePatterns PS00211 ABC transporters family signature. 473 487 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 COP00_00415 7ae8ff72cae493dbc86717445e1e6f5a 585 SUPERFAMILY SSF52540 329 572 1.05E-88 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_00415 7ae8ff72cae493dbc86717445e1e6f5a 585 Gene3D G3DSA:3.40.50.300 329 582 1.2E-86 T 13-10-2018 COP00_03265 58120ecdc496335e66b8fa4723ea1d19 436 TIGRFAM TIGR01537 portal_HK97: phage portal protein, HK97 family 44 381 1.4E-87 T 13-10-2018 IPR006427 Phage portal protein, HK97 COP00_03265 58120ecdc496335e66b8fa4723ea1d19 436 Pfam PF04860 Phage portal protein 53 376 3.4E-88 T 13-10-2018 IPR006944 Bacteriophage/Gene transfer agent portal protein COP00_14920 0343e39a3ee460f5e7b72b80330d75e4 335 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 10 150 3.0E-48 T 13-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 COP00_14920 0343e39a3ee460f5e7b72b80330d75e4 335 SUPERFAMILY SSF53671 6 333 3.54E-105 T 13-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 COP00_14920 0343e39a3ee460f5e7b72b80330d75e4 335 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 9 332 84.612 T 13-10-2018 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 COP00_14920 0343e39a3ee460f5e7b72b80330d75e4 335 Gene3D G3DSA:3.40.50.1370 153 318 7.6E-142 T 13-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 COP00_14920 0343e39a3ee460f5e7b72b80330d75e4 335 Gene3D G3DSA:3.40.50.1370 7 328 7.6E-142 T 13-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 COP00_14920 0343e39a3ee460f5e7b72b80330d75e4 335 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 156 329 1.3E-58 T 13-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 COP00_14920 0343e39a3ee460f5e7b72b80330d75e4 335 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 55 62 - T 13-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 COP00_14920 0343e39a3ee460f5e7b72b80330d75e4 335 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 55 74 1.9E-25 T 13-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 COP00_14920 0343e39a3ee460f5e7b72b80330d75e4 335 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 296 319 1.9E-25 T 13-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 COP00_14920 0343e39a3ee460f5e7b72b80330d75e4 335 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 137 148 1.9E-25 T 13-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 COP00_14920 0343e39a3ee460f5e7b72b80330d75e4 335 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 267 276 1.9E-25 T 13-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 COP00_14920 0343e39a3ee460f5e7b72b80330d75e4 335 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 11 331 4.3E-134 T 13-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 COP00_14920 0343e39a3ee460f5e7b72b80330d75e4 335 PRINTS PR00102 Ornithine carbamoyltransferase signature 310 321 1.7E-30 T 13-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 COP00_14920 0343e39a3ee460f5e7b72b80330d75e4 335 PRINTS PR00102 Ornithine carbamoyltransferase signature 53 67 1.7E-30 T 13-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 COP00_14920 0343e39a3ee460f5e7b72b80330d75e4 335 PRINTS PR00102 Ornithine carbamoyltransferase signature 86 99 1.7E-30 T 13-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 COP00_14920 0343e39a3ee460f5e7b72b80330d75e4 335 PRINTS PR00102 Ornithine carbamoyltransferase signature 126 140 1.7E-30 T 13-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 COP00_14920 0343e39a3ee460f5e7b72b80330d75e4 335 PRINTS PR00102 Ornithine carbamoyltransferase signature 230 240 1.7E-30 T 13-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 COP00_23620 de3a9528c5e45c6de39cc9dc79d0f0b3 275 SUPERFAMILY SSF46785 55 105 1.65E-6 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_20755 2c669c6709c51f1e79110dd3255cb8d6 238 Gene3D G3DSA:3.90.550.10 1 83 1.8E-7 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases COP00_20755 2c669c6709c51f1e79110dd3255cb8d6 238 SUPERFAMILY SSF53448 1 69 2.14E-5 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases COP00_13910 b1557dbe8055ac1f97a48ded3be6ddf0 329 SUPERFAMILY SSF47413 1 59 3.12E-19 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 COP00_13910 b1557dbe8055ac1f97a48ded3be6ddf0 329 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 64 311 3.0E-36 T 13-10-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain COP00_13910 b1557dbe8055ac1f97a48ded3be6ddf0 329 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 3.0E-20 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 COP00_13910 b1557dbe8055ac1f97a48ded3be6ddf0 329 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 13-10-2018 COP00_13910 b1557dbe8055ac1f97a48ded3be6ddf0 329 Gene3D G3DSA:3.40.50.2300 63 306 5.2E-60 T 13-10-2018 COP00_13910 b1557dbe8055ac1f97a48ded3be6ddf0 329 SMART SM00354 1 71 1.4E-29 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 COP00_13910 b1557dbe8055ac1f97a48ded3be6ddf0 329 Gene3D G3DSA:3.40.50.2300 159 288 5.2E-60 T 13-10-2018 COP00_13910 b1557dbe8055ac1f97a48ded3be6ddf0 329 SUPERFAMILY SSF53822 63 329 2.75E-62 T 13-10-2018 IPR028082 Periplasmic binding protein-like I COP00_13910 b1557dbe8055ac1f97a48ded3be6ddf0 329 Gene3D G3DSA:1.10.260.40 3 59 9.5E-23 T 13-10-2018 COP00_21225 d68e967f3321d553e23920c2e02a6f4c 356 Pfam PF06081 Aromatic acid exporter family member 1 1 142 1.4E-40 T 13-10-2018 IPR010343 Aromatic acid exporter family member 1 COP00_21545 1c550b3a9fec07864ecae211f3b788c7 334 Pfam PF00005 ABC transporter 21 169 1.3E-32 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 COP00_21545 1c550b3a9fec07864ecae211f3b788c7 334 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 COP00_21545 1c550b3a9fec07864ecae211f3b788c7 334 SMART SM00382 30 218 6.9E-12 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_21545 1c550b3a9fec07864ecae211f3b788c7 334 Pfam PF09383 NIL domain 261 331 3.8E-21 T 13-10-2018 IPR018449 NIL domain COP00_21545 1c550b3a9fec07864ecae211f3b788c7 334 SMART SM00930 258 333 2.7E-26 T 13-10-2018 IPR018449 NIL domain COP00_21545 1c550b3a9fec07864ecae211f3b788c7 334 SUPERFAMILY SSF52540 1 240 7.61E-84 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_21545 1c550b3a9fec07864ecae211f3b788c7 334 SUPERFAMILY SSF55021 249 333 1.26E-20 T 13-10-2018 COP00_21545 1c550b3a9fec07864ecae211f3b788c7 334 Gene3D G3DSA:3.30.70.260 233 333 9.3E-27 T 13-10-2018 COP00_21545 1c550b3a9fec07864ecae211f3b788c7 334 Gene3D G3DSA:3.40.50.300 1 232 2.7E-72 T 13-10-2018 COP00_03770 5152f8f70ad1d205ef31fdc9ba4a2bc4 1228 Pfam PF01568 Molydopterin dinucleotide binding domain 1080 1191 1.5E-21 T 13-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 COP00_03770 5152f8f70ad1d205ef31fdc9ba4a2bc4 1228 Pfam PF14710 Respiratory nitrate reductase alpha N-terminal 10 44 6.6E-13 T 13-10-2018 IPR028189 Nitrate reductase, alpha subunit, N-terminal KEGG: 00910+1.7.5.1|MetaCyc: PWY-6748 COP00_03770 5152f8f70ad1d205ef31fdc9ba4a2bc4 1228 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 768 785 - T 13-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 COP00_03770 5152f8f70ad1d205ef31fdc9ba4a2bc4 1228 Gene3D G3DSA:3.40.50.12440 48 1228 0.0 T 13-10-2018 COP00_03770 5152f8f70ad1d205ef31fdc9ba4a2bc4 1228 SUPERFAMILY SSF50692 1074 1226 4.29E-45 T 13-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily COP00_03770 5152f8f70ad1d205ef31fdc9ba4a2bc4 1228 SMART SM00926 47 109 9.1E-7 T 13-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 COP00_03770 5152f8f70ad1d205ef31fdc9ba4a2bc4 1228 TIGRFAM TIGR01580 narG: nitrate reductase, alpha subunit 7 1227 0.0 T 13-10-2018 IPR006468 Nitrate reductase, alpha subunit GO:0008940|GO:0009325|GO:0042126|GO:0055114 KEGG: 00910+1.7.5.1|MetaCyc: PWY-6748 COP00_03770 5152f8f70ad1d205ef31fdc9ba4a2bc4 1228 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 52 70 - T 13-10-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 COP00_03770 5152f8f70ad1d205ef31fdc9ba4a2bc4 1228 Pfam PF00384 Molybdopterin oxidoreductase 112 824 5.1E-183 T 13-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 COP00_03770 5152f8f70ad1d205ef31fdc9ba4a2bc4 1228 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 1117 1144 - T 13-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 COP00_03770 5152f8f70ad1d205ef31fdc9ba4a2bc4 1228 SUPERFAMILY SSF53706 9 1061 0.0 T 13-10-2018 COP00_08385 32cac2ed711ddbe06297150bd2b9d6c1 524 SUPERFAMILY SSF51905 6 388 1.18E-51 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily COP00_08385 32cac2ed711ddbe06297150bd2b9d6c1 524 Gene3D G3DSA:3.50.50.60 6 382 3.2E-125 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily COP00_08385 32cac2ed711ddbe06297150bd2b9d6c1 524 Pfam PF02910 Fumarate reductase flavoprotein C-term 414 507 3.8E-16 T 13-10-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 COP00_08385 32cac2ed711ddbe06297150bd2b9d6c1 524 SUPERFAMILY SSF46977 412 507 2.88E-27 T 13-10-2018 IPR037099 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 COP00_08385 32cac2ed711ddbe06297150bd2b9d6c1 524 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 3 489 4.0E-182 T 13-10-2018 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342 COP00_08385 32cac2ed711ddbe06297150bd2b9d6c1 524 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 6 25 2.7E-5 T 13-10-2018 COP00_08385 32cac2ed711ddbe06297150bd2b9d6c1 524 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 333 355 2.7E-5 T 13-10-2018 COP00_08385 32cac2ed711ddbe06297150bd2b9d6c1 524 Pfam PF00890 FAD binding domain 6 370 6.4E-73 T 13-10-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 COP00_08385 32cac2ed711ddbe06297150bd2b9d6c1 524 SUPERFAMILY SSF56425 220 330 1.27E-31 T 13-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 COP00_08385 32cac2ed711ddbe06297150bd2b9d6c1 524 Gene3D G3DSA:1.20.58.100 403 508 7.5E-21 T 13-10-2018 COP00_08385 32cac2ed711ddbe06297150bd2b9d6c1 524 Gene3D G3DSA:3.90.700.10 230 336 3.2E-125 T 13-10-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain superfamily Reactome: R-HSA-611105|Reactome: R-HSA-71403 COP00_14205 92e271c5c29dbdcc573a13bf86588d5b 433 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 336 356 - T 13-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 COP00_14205 92e271c5c29dbdcc573a13bf86588d5b 433 Pfam PF00860 Permease family 2 390 2.4E-80 T 13-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 COP00_07955 6fa697e8df78158238778be172b82580 189 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 150 165 7.8E-6 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 COP00_07955 6fa697e8df78158238778be172b82580 189 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 165 181 7.8E-6 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 COP00_07955 6fa697e8df78158238778be172b82580 189 Gene3D G3DSA:1.10.10.60 81 140 5.4E-13 T 13-10-2018 COP00_07955 6fa697e8df78158238778be172b82580 189 Gene3D G3DSA:1.10.10.2730 141 185 2.0E-14 T 13-10-2018 COP00_07955 6fa697e8df78158238778be172b82580 189 SUPERFAMILY SSF57884 10 84 6.8E-31 T 13-10-2018 IPR035451 Ada-like domain superfamily COP00_07955 6fa697e8df78158238778be172b82580 189 SUPERFAMILY SSF46689 135 182 5.82E-10 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 COP00_07955 6fa697e8df78158238778be172b82580 189 SMART SM00342 98 181 3.5E-27 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 COP00_07955 6fa697e8df78158238778be172b82580 189 SUPERFAMILY SSF46689 84 131 2.55E-8 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 COP00_07955 6fa697e8df78158238778be172b82580 189 Pfam PF02805 Metal binding domain of Ada 10 74 4.2E-29 T 13-10-2018 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 COP00_07955 6fa697e8df78158238778be172b82580 189 Pfam PF12833 Helix-turn-helix domain 104 182 1.2E-21 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 COP00_07955 6fa697e8df78158238778be172b82580 189 Gene3D G3DSA:3.40.10.10 4 75 1.6E-29 T 13-10-2018 IPR035451 Ada-like domain superfamily COP00_07955 6fa697e8df78158238778be172b82580 189 PIRSF PIRSF000408 1 189 8.3E-72 T 13-10-2018 IPR016220 Methylphosphotriester-DNA alkyltransferase, AdaA COP00_11130 ee997198e7540e821b5eef677afb9d65 289 Pfam PF00440 Bacterial regulatory proteins, tetR family 8 53 4.4E-19 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 COP00_11130 ee997198e7540e821b5eef677afb9d65 289 Gene3D G3DSA:1.10.357.10 1 194 8.3E-32 T 13-10-2018 COP00_11130 ee997198e7540e821b5eef677afb9d65 289 ProSitePatterns PS01081 TetR-type HTH domain signature. 20 51 - T 13-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site COP00_11130 ee997198e7540e821b5eef677afb9d65 289 SUPERFAMILY SSF46689 4 78 4.06E-20 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 COP00_11130 ee997198e7540e821b5eef677afb9d65 289 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 29 52 1.7E-10 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 COP00_11130 ee997198e7540e821b5eef677afb9d65 289 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 8 21 1.7E-10 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 COP00_01480 778bd985e04d5bb64e190b1c847402fe 209 Pfam PF04509 CheC-like family 112 146 1.3E-13 T 13-10-2018 IPR007597 CheC-like protein GO:0016787 COP00_01480 778bd985e04d5bb64e190b1c847402fe 209 Pfam PF04509 CheC-like family 11 46 9.5E-13 T 13-10-2018 IPR007597 CheC-like protein GO:0016787 COP00_01480 778bd985e04d5bb64e190b1c847402fe 209 SUPERFAMILY SSF103039 7 206 2.22E-53 T 13-10-2018 IPR028976 CheC-like superfamily COP00_01480 778bd985e04d5bb64e190b1c847402fe 209 Gene3D G3DSA:3.40.1550.10 6 207 2.3E-58 T 13-10-2018 IPR028976 CheC-like superfamily COP00_22260 0d7fb3e0ef4fa66754560303ed1b973f 329 TIGRFAM TIGR00545 lipoyltrans: lipoyltransferase and lipoate-protein ligase 2 322 7.3E-136 T 13-10-2018 IPR004562 Lipoyltransferase/lipoate-protein ligase GO:0009249 KEGG: 00785+6.3.1.20|Reactome: R-HSA-389661 COP00_22260 0d7fb3e0ef4fa66754560303ed1b973f 329 Gene3D G3DSA:3.30.390.50 243 329 1.1E-33 T 13-10-2018 COP00_22260 0d7fb3e0ef4fa66754560303ed1b973f 329 SUPERFAMILY SSF82649 243 328 6.28E-28 T 13-10-2018 COP00_22260 0d7fb3e0ef4fa66754560303ed1b973f 329 Pfam PF10437 Bacterial lipoate protein ligase C-terminus 244 327 5.4E-31 T 13-10-2018 IPR019491 Lipoate protein ligase, C-terminal KEGG: 00785+6.3.1.20 COP00_22260 0d7fb3e0ef4fa66754560303ed1b973f 329 Gene3D G3DSA:3.30.930.10 3 242 7.0E-82 T 13-10-2018 COP00_22260 0d7fb3e0ef4fa66754560303ed1b973f 329 SUPERFAMILY SSF55681 2 242 1.35E-81 T 13-10-2018 COP00_22260 0d7fb3e0ef4fa66754560303ed1b973f 329 Pfam PF03099 Biotin/lipoate A/B protein ligase family 48 151 3.7E-11 T 13-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 COP00_17905 8afcc0fa4612902bfb680d138c83265b 470 SUPERFAMILY SSF55103 220 460 8.67E-71 T 13-10-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 COP00_17905 8afcc0fa4612902bfb680d138c83265b 470 Gene3D G3DSA:3.30.70.2740 336 417 4.0E-14 T 13-10-2018 COP00_17905 8afcc0fa4612902bfb680d138c83265b 470 TIGRFAM TIGR00387 glcD: glycolate oxidase, subunit GlcD 44 456 1.1E-185 T 13-10-2018 IPR004490 Glycolate oxidase subunit GlcD GO:0008891|GO:0009339 COP00_17905 8afcc0fa4612902bfb680d138c83265b 470 Gene3D G3DSA:3.30.465.40 3 239 2.3E-80 T 13-10-2018 COP00_17905 8afcc0fa4612902bfb680d138c83265b 470 Pfam PF01565 FAD binding domain 41 180 8.2E-43 T 13-10-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 COP00_17905 8afcc0fa4612902bfb680d138c83265b 470 Pfam PF02913 FAD linked oxidases, C-terminal domain 217 457 2.4E-75 T 13-10-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 COP00_17905 8afcc0fa4612902bfb680d138c83265b 470 Gene3D G3DSA:1.10.45.10 418 458 8.9E-12 T 13-10-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 COP00_17905 8afcc0fa4612902bfb680d138c83265b 470 SUPERFAMILY SSF56176 5 217 7.48E-75 T 13-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 COP00_23775 dea66a15014a06bfb4eeb5e8ca15d734 760 Pfam PF12833 Helix-turn-helix domain 678 754 7.6E-19 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 COP00_23775 dea66a15014a06bfb4eeb5e8ca15d734 760 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 708 749 - T 13-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 COP00_23775 dea66a15014a06bfb4eeb5e8ca15d734 760 Gene3D G3DSA:1.10.10.60 652 703 3.9E-15 T 13-10-2018 COP00_23775 dea66a15014a06bfb4eeb5e8ca15d734 760 SUPERFAMILY SSF46689 707 755 3.49E-10 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 COP00_23775 dea66a15014a06bfb4eeb5e8ca15d734 760 SUPERFAMILY SSF46689 655 705 7.69E-9 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 COP00_23775 dea66a15014a06bfb4eeb5e8ca15d734 760 Gene3D G3DSA:1.10.10.60 704 758 2.1E-18 T 13-10-2018 COP00_23775 dea66a15014a06bfb4eeb5e8ca15d734 760 SMART SM00342 671 753 2.1E-31 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 COP00_05090 1d27d2c5a7d8733174ba91fff4177676 297 TIGRFAM TIGR03827 GNAT_ablB: putative beta-lysine N-acetyltransferase 13 274 1.8E-90 T 13-10-2018 IPR022525 Beta-lysine N-acetyltransferase GO:0016407 COP00_05090 1d27d2c5a7d8733174ba91fff4177676 297 SUPERFAMILY SSF55729 126 257 1.8E-17 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase COP00_05090 1d27d2c5a7d8733174ba91fff4177676 297 Pfam PF13527 Acetyltransferase (GNAT) domain 126 233 1.4E-5 T 13-10-2018 COP00_05090 1d27d2c5a7d8733174ba91fff4177676 297 Gene3D G3DSA:3.40.630.30 25 253 1.1E-12 T 13-10-2018 COP00_18395 ab2939652e3f6e14933f46e62b4893d2 207 Pfam PF04299 Putative FMN-binding domain 1 159 4.3E-49 T 13-10-2018 IPR007396 Transcriptional regulator PAI 2-type COP00_18395 ab2939652e3f6e14933f46e62b4893d2 207 PIRSF PIRSF010372 1 205 3.0E-69 T 13-10-2018 IPR007396 Transcriptional regulator PAI 2-type COP00_18395 ab2939652e3f6e14933f46e62b4893d2 207 SUPERFAMILY SSF50475 10 189 2.54E-40 T 13-10-2018 COP00_18395 ab2939652e3f6e14933f46e62b4893d2 207 Gene3D G3DSA:2.30.110.10 1 204 4.7E-62 T 13-10-2018 IPR012349 FMN-binding split barrel GO:0048037 COP00_08945 4d9f375118f827d61b3d3dcc93091a08 361 PIRSF PIRSF001123 4 361 3.0E-147 T 13-10-2018 IPR008007 Peptidase M42 COP00_08945 4d9f375118f827d61b3d3dcc93091a08 361 SUPERFAMILY SSF53187 6 358 1.44E-73 T 13-10-2018 COP00_08945 4d9f375118f827d61b3d3dcc93091a08 361 Gene3D G3DSA:3.40.630.10 12 345 2.8E-138 T 13-10-2018 COP00_08945 4d9f375118f827d61b3d3dcc93091a08 361 Gene3D G3DSA:2.40.30.40 77 164 2.8E-138 T 13-10-2018 IPR023367 Peptidase M42, domain 2 COP00_08945 4d9f375118f827d61b3d3dcc93091a08 361 Pfam PF05343 M42 glutamyl aminopeptidase 48 342 5.1E-116 T 13-10-2018 IPR008007 Peptidase M42 COP00_08945 4d9f375118f827d61b3d3dcc93091a08 361 SUPERFAMILY SSF101821 73 182 7.48E-34 T 13-10-2018 COP00_06565 ab5f98d1f531723f72ff46866e240593 576 PIRSF PIRSF003128 1 572 4.9E-191 T 13-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 COP00_06565 ab5f98d1f531723f72ff46866e240593 576 Gene3D G3DSA:3.40.50.300 259 568 1.8E-53 T 13-10-2018 COP00_06565 ab5f98d1f531723f72ff46866e240593 576 SUPERFAMILY SSF52540 2 531 8.15E-67 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_06565 ab5f98d1f531723f72ff46866e240593 576 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 568 8.5E-213 T 13-10-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 COP00_06565 ab5f98d1f531723f72ff46866e240593 576 Gene3D G3DSA:3.40.50.300 1 227 6.0E-45 T 13-10-2018 COP00_06565 ab5f98d1f531723f72ff46866e240593 576 Pfam PF13476 AAA domain 4 231 8.5E-16 T 13-10-2018 IPR038729 Rad50/SbcC-type AAA domain COP00_18855 135bd932dbc988151430f73809bbf0a0 606 Gene3D G3DSA:1.20.1740.10 44 464 1.7E-23 T 13-10-2018 COP00_18855 135bd932dbc988151430f73809bbf0a0 606 Pfam PF13520 Amino acid permease 29 446 1.6E-30 T 13-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 COP00_19370 28c374767175878787b141a570a16778 390 Gene3D G3DSA:1.20.1090.10 185 389 2.2E-45 T 13-10-2018 COP00_19370 28c374767175878787b141a570a16778 390 SUPERFAMILY SSF56796 1 388 5.76E-117 T 13-10-2018 COP00_19370 28c374767175878787b141a570a16778 390 Pfam PF00465 Iron-containing alcohol dehydrogenase 9 368 1.0E-100 T 13-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 COP00_19370 28c374767175878787b141a570a16778 390 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 173 201 - T 13-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 COP00_19370 28c374767175878787b141a570a16778 390 Gene3D G3DSA:3.40.50.1970 1 184 5.5E-56 T 13-10-2018 COP00_19370 28c374767175878787b141a570a16778 390 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 264 284 - T 13-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 COP00_14400 4aee42fb44dfe0c8968bb8772fe36a71 387 Pfam PF13412 Winged helix-turn-helix DNA-binding 17 56 4.6E-5 T 13-10-2018 COP00_14400 4aee42fb44dfe0c8968bb8772fe36a71 387 Pfam PF00480 ROK family 83 376 7.3E-63 T 13-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 COP00_14400 4aee42fb44dfe0c8968bb8772fe36a71 387 Gene3D G3DSA:1.10.10.10 2 76 2.6E-19 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_14400 4aee42fb44dfe0c8968bb8772fe36a71 387 ProSitePatterns PS01125 ROK family signature. 213 240 - T 13-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 COP00_14400 4aee42fb44dfe0c8968bb8772fe36a71 387 SUPERFAMILY SSF46785 8 73 9.1E-18 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_14400 4aee42fb44dfe0c8968bb8772fe36a71 387 SUPERFAMILY SSF53067 80 378 8.48E-50 T 13-10-2018 COP00_14400 4aee42fb44dfe0c8968bb8772fe36a71 387 Gene3D G3DSA:3.30.420.40 81 376 2.0E-81 T 13-10-2018 COP00_14400 4aee42fb44dfe0c8968bb8772fe36a71 387 Gene3D G3DSA:3.30.420.40 204 358 2.0E-81 T 13-10-2018 COP00_01320 0d7997a2161eb42ea438ba589fbfe616 304 SUPERFAMILY SSF56349 5 294 2.71E-61 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 COP00_01320 0d7997a2161eb42ea438ba589fbfe616 304 Gene3D G3DSA:1.10.443.10 112 294 6.9E-60 T 13-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 COP00_01320 0d7997a2161eb42ea438ba589fbfe616 304 TIGRFAM TIGR02224 recomb_XerC: tyrosine recombinase XerC 11 302 5.5E-109 T 13-10-2018 IPR011931 Tyrosine recombinase XerC GO:0003677|GO:0006310|GO:0007059|GO:0015074|GO:0051301 COP00_01320 0d7997a2161eb42ea438ba589fbfe616 304 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 9 91 6.4E-22 T 13-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 COP00_01320 0d7997a2161eb42ea438ba589fbfe616 304 Gene3D G3DSA:1.10.150.130 5 99 2.4E-23 T 13-10-2018 IPR010998 Integrase/recombinase, N-terminal COP00_01320 0d7997a2161eb42ea438ba589fbfe616 304 Pfam PF00589 Phage integrase family 112 286 1.5E-49 T 13-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 COP00_01320 0d7997a2161eb42ea438ba589fbfe616 304 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 6 300 55.421 T 13-10-2018 IPR023009 Tyrosine recombinase XerC/XerD COP00_08295 37a65fa2a23f33e4767f3b12871f9482 87 PRINTS PR01853 Bacterial YajC preprotein translocase signature 43 61 2.3E-15 T 13-10-2018 IPR003849 Preprotein translocase YajC COP00_08295 37a65fa2a23f33e4767f3b12871f9482 87 PRINTS PR01853 Bacterial YajC preprotein translocase signature 5 25 2.3E-15 T 13-10-2018 IPR003849 Preprotein translocase YajC COP00_08295 37a65fa2a23f33e4767f3b12871f9482 87 Pfam PF02699 Preprotein translocase subunit 7 82 1.9E-31 T 13-10-2018 IPR003849 Preprotein translocase YajC COP00_08295 37a65fa2a23f33e4767f3b12871f9482 87 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 4 84 6.3E-34 T 13-10-2018 IPR003849 Preprotein translocase YajC COP00_08295 37a65fa2a23f33e4767f3b12871f9482 87 SMART SM01323 3 85 1.2E-43 T 13-10-2018 IPR003849 Preprotein translocase YajC COP00_23700 97b2f93aaaff3e77e79a1dcd3087bd99 248 Gene3D G3DSA:1.20.5.460 92 127 4.8E-17 T 13-10-2018 COP00_23700 97b2f93aaaff3e77e79a1dcd3087bd99 248 Pfam PF14171 Toxin SpoIISA, type II toxin-antitoxin system 3 238 9.0E-92 T 13-10-2018 IPR025940 Toxin SpoIISA, type II toxin-antitoxin system GO:0009405|GO:0016021 COP00_23700 97b2f93aaaff3e77e79a1dcd3087bd99 248 ProDom PD120066 SPORULATION STAGE SA II SPOIISA TRANSMEMBRANE MEMBRANE KILLER 1 247 2.0E-130 T 13-10-2018 COP00_23700 97b2f93aaaff3e77e79a1dcd3087bd99 248 Gene3D G3DSA:3.30.70.2720 128 248 2.0E-40 T 13-10-2018 COP00_16280 782e61d3f337ff937e151426b5e10d17 208 Pfam PF14693 Ribosomal protein TL5, C-terminal domain 99 181 6.5E-25 T 13-10-2018 IPR020057 Ribosomal protein L25, beta domain COP00_16280 782e61d3f337ff937e151426b5e10d17 208 Gene3D G3DSA:2.40.240.10 1 93 2.0E-26 T 13-10-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, N-terminal Reactome: R-HSA-2408517|Reactome: R-HSA-379716 COP00_16280 782e61d3f337ff937e151426b5e10d17 208 Hamap MF_01334 50S ribosomal protein L25 [rplY]. 2 179 25.767 T 13-10-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 COP00_16280 782e61d3f337ff937e151426b5e10d17 208 Gene3D G3DSA:2.170.120.20 96 188 3.3E-25 T 13-10-2018 IPR037121 Ribosomal protein L25, C-terminal COP00_16280 782e61d3f337ff937e151426b5e10d17 208 TIGRFAM TIGR00731 bL25_bact_ctc: ribosomal protein bL25, Ctc-form 4 178 1.8E-55 T 13-10-2018 IPR001021 Ribosomal protein L25, long-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 COP00_16280 782e61d3f337ff937e151426b5e10d17 208 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 4 90 2.0E-27 T 13-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 COP00_16280 782e61d3f337ff937e151426b5e10d17 208 Pfam PF01386 Ribosomal L25p family 4 90 7.7E-23 T 13-10-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 COP00_16280 782e61d3f337ff937e151426b5e10d17 208 SUPERFAMILY SSF50715 3 187 2.44E-53 T 13-10-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 COP00_06735 f15b8a4aa0bc972e091c8a84736b87b9 555 SUPERFAMILY SSF52540 168 519 9.48E-55 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_06735 f15b8a4aa0bc972e091c8a84736b87b9 555 Pfam PF00176 SNF2 family N-terminal domain 79 318 5.1E-39 T 13-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 COP00_06735 f15b8a4aa0bc972e091c8a84736b87b9 555 Pfam PF00271 Helicase conserved C-terminal domain 361 466 2.7E-20 T 13-10-2018 IPR001650 Helicase, C-terminal COP00_06735 f15b8a4aa0bc972e091c8a84736b87b9 555 Gene3D G3DSA:3.40.50.10810 58 329 5.5E-61 T 13-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily COP00_06735 f15b8a4aa0bc972e091c8a84736b87b9 555 SMART SM00487 56 237 8.1E-31 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain COP00_06735 f15b8a4aa0bc972e091c8a84736b87b9 555 Gene3D G3DSA:3.40.50.300 330 545 3.1E-45 T 13-10-2018 COP00_06735 f15b8a4aa0bc972e091c8a84736b87b9 555 SMART SM00490 386 466 6.0E-20 T 13-10-2018 IPR001650 Helicase, C-terminal COP00_06735 f15b8a4aa0bc972e091c8a84736b87b9 555 SUPERFAMILY SSF52540 20 259 9.04E-47 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_00275 61a1cfe6ebd7fa3faa7244ea00e0e924 433 Gene3D G3DSA:1.20.1250.20 2 405 1.0E-33 T 13-10-2018 COP00_00275 61a1cfe6ebd7fa3faa7244ea00e0e924 433 TIGRFAM TIGR00900 2A0121: H+ Antiporter protein 9 375 6.5E-107 T 13-10-2018 IPR004751 Drug antiporter protein GO:0015307|GO:0015893 COP00_00275 61a1cfe6ebd7fa3faa7244ea00e0e924 433 SUPERFAMILY SSF103473 5 410 1.44E-38 T 13-10-2018 IPR036259 MFS transporter superfamily COP00_00275 61a1cfe6ebd7fa3faa7244ea00e0e924 433 Pfam PF07690 Major Facilitator Superfamily 12 357 6.6E-26 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 COP00_12925 de882aa0e5b245ed0fe6b0ddf1824ee6 160 Gene3D G3DSA:1.10.10.10 21 157 9.3E-27 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_12925 de882aa0e5b245ed0fe6b0ddf1824ee6 160 PRINTS PR00598 Bacterial regulatory protein MarR family signature 81 96 2.4E-7 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 COP00_12925 de882aa0e5b245ed0fe6b0ddf1824ee6 160 PRINTS PR00598 Bacterial regulatory protein MarR family signature 64 80 2.4E-7 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 COP00_12925 de882aa0e5b245ed0fe6b0ddf1824ee6 160 PRINTS PR00598 Bacterial regulatory protein MarR family signature 100 116 2.4E-7 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 COP00_12925 de882aa0e5b245ed0fe6b0ddf1824ee6 160 SUPERFAMILY SSF46785 40 154 1.31E-24 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_12925 de882aa0e5b245ed0fe6b0ddf1824ee6 160 SMART SM00347 40 140 5.2E-32 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 COP00_12925 de882aa0e5b245ed0fe6b0ddf1824ee6 160 ProSitePatterns PS01117 MarR-type HTH domain signature. 79 113 - T 13-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site COP00_12925 de882aa0e5b245ed0fe6b0ddf1824ee6 160 Pfam PF01047 MarR family 47 104 1.1E-17 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 COP00_18595 737b85fcc2bf1735bfb289ff5bbf712f 252 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 COP00_18595 737b85fcc2bf1735bfb289ff5bbf712f 252 Gene3D G3DSA:3.40.50.300 1 251 5.3E-68 T 13-10-2018 COP00_18595 737b85fcc2bf1735bfb289ff5bbf712f 252 SMART SM00382 26 213 5.2E-12 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_18595 737b85fcc2bf1735bfb289ff5bbf712f 252 SUPERFAMILY SSF52540 1 227 1.36E-60 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_18595 737b85fcc2bf1735bfb289ff5bbf712f 252 Pfam PF00005 ABC transporter 19 164 6.8E-31 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 COP00_07240 1cd36f979a42e7868ef30ff5071f0b14 715 SUPERFAMILY SSF109604 501 696 1.48E-16 T 13-10-2018 COP00_07240 1cd36f979a42e7868ef30ff5071f0b14 715 Pfam PF07697 7TM-HD extracellular 51 271 1.6E-39 T 13-10-2018 IPR011624 Metal-dependent phosphohydrolase, 7TM extracellular domain COP00_07240 1cd36f979a42e7868ef30ff5071f0b14 715 TIGRFAM TIGR00277 HDIG: HDIG domain 499 597 1.4E-29 T 13-10-2018 IPR006675 HDIG domain COP00_07240 1cd36f979a42e7868ef30ff5071f0b14 715 Pfam PF07698 7TM receptor with intracellular HD hydrolase 278 477 1.9E-51 T 13-10-2018 IPR011621 Metal-dependent phosphohydrolase, 7TM intracellular domain COP00_07240 1cd36f979a42e7868ef30ff5071f0b14 715 SMART SM00471 498 653 2.7E-12 T 13-10-2018 IPR003607 HD/PDEase domain COP00_07240 1cd36f979a42e7868ef30ff5071f0b14 715 Pfam PF01966 HD domain 502 643 4.6E-20 T 13-10-2018 IPR006674 HD domain COP00_07240 1cd36f979a42e7868ef30ff5071f0b14 715 Gene3D G3DSA:1.10.3210.10 475 673 7.7E-28 T 13-10-2018 COP00_17685 f2cd3f16e6d6dd7461743167ad19f01f 68 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 5 47 2.9E-18 T 13-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 COP00_17685 f2cd3f16e6d6dd7461743167ad19f01f 68 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 22 41 2.4E-5 T 13-10-2018 COP00_17685 f2cd3f16e6d6dd7461743167ad19f01f 68 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 2 22 2.4E-5 T 13-10-2018 COP00_17685 f2cd3f16e6d6dd7461743167ad19f01f 68 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 2 66 16.633 T 13-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 COP00_17685 f2cd3f16e6d6dd7461743167ad19f01f 68 Pfam PF02416 mttA/Hcf106 family 5 54 1.2E-20 T 13-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 COP00_11165 3a623d059fa371c90e9eb5b5bfb9b574 211 SUPERFAMILY SSF46894 136 210 2.21E-24 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 COP00_11165 3a623d059fa371c90e9eb5b5bfb9b574 211 Pfam PF00196 Bacterial regulatory proteins, luxR family 149 204 2.2E-23 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 COP00_11165 3a623d059fa371c90e9eb5b5bfb9b574 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 180 192 1.9E-16 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 COP00_11165 3a623d059fa371c90e9eb5b5bfb9b574 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 164 180 1.9E-16 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 COP00_11165 3a623d059fa371c90e9eb5b5bfb9b574 211 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 150 164 1.9E-16 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 COP00_11165 3a623d059fa371c90e9eb5b5bfb9b574 211 ProSitePatterns PS00622 LuxR-type HTH domain signature. 164 191 - T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 COP00_11165 3a623d059fa371c90e9eb5b5bfb9b574 211 Pfam PF00072 Response regulator receiver domain 4 115 1.9E-26 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 COP00_11165 3a623d059fa371c90e9eb5b5bfb9b574 211 SUPERFAMILY SSF52172 2 130 3.98E-32 T 13-10-2018 IPR011006 CheY-like superfamily COP00_11165 3a623d059fa371c90e9eb5b5bfb9b574 211 SMART SM00448 2 115 2.6E-29 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 COP00_11165 3a623d059fa371c90e9eb5b5bfb9b574 211 SMART SM00421 147 204 1.2E-29 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 COP00_11165 3a623d059fa371c90e9eb5b5bfb9b574 211 Gene3D G3DSA:3.40.50.12740 2 210 9.3E-73 T 13-10-2018 COP00_14330 67174b08a591b1a905a674584433aeac 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 160 176 3.4E-9 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 COP00_14330 67174b08a591b1a905a674584433aeac 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 176 188 3.4E-9 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 COP00_14330 67174b08a591b1a905a674584433aeac 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 146 160 3.4E-9 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 COP00_14330 67174b08a591b1a905a674584433aeac 210 Pfam PF00072 Response regulator receiver domain 4 114 2.3E-19 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 COP00_14330 67174b08a591b1a905a674584433aeac 210 SUPERFAMILY SSF46894 136 206 3.27E-16 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 COP00_14330 67174b08a591b1a905a674584433aeac 210 Gene3D G3DSA:1.10.10.10 143 209 2.0E-17 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_14330 67174b08a591b1a905a674584433aeac 210 SUPERFAMILY SSF52172 2 136 4.55E-23 T 13-10-2018 IPR011006 CheY-like superfamily COP00_14330 67174b08a591b1a905a674584433aeac 210 SMART SM00421 143 200 9.8E-16 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 COP00_14330 67174b08a591b1a905a674584433aeac 210 Pfam PF00196 Bacterial regulatory proteins, luxR family 145 197 1.9E-16 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 COP00_14330 67174b08a591b1a905a674584433aeac 210 Gene3D G3DSA:3.40.50.2300 1 135 3.1E-23 T 13-10-2018 COP00_14330 67174b08a591b1a905a674584433aeac 210 SMART SM00448 2 116 7.4E-17 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 COP00_20985 4ec65b0ab07b11e5c14dbf04d4020e90 455 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 35 45 - T 13-10-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 COP00_20985 4ec65b0ab07b11e5c14dbf04d4020e90 455 SUPERFAMILY SSF51905 3 326 2.99E-55 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily COP00_20985 4ec65b0ab07b11e5c14dbf04d4020e90 455 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 255 269 2.8E-64 T 13-10-2018 COP00_20985 4ec65b0ab07b11e5c14dbf04d4020e90 455 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 332 353 2.8E-64 T 13-10-2018 COP00_20985 4ec65b0ab07b11e5c14dbf04d4020e90 455 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 136 145 2.8E-64 T 13-10-2018 COP00_20985 4ec65b0ab07b11e5c14dbf04d4020e90 455 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 297 304 2.8E-64 T 13-10-2018 COP00_20985 4ec65b0ab07b11e5c14dbf04d4020e90 455 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 2 24 2.8E-64 T 13-10-2018 COP00_20985 4ec65b0ab07b11e5c14dbf04d4020e90 455 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 419 439 2.8E-64 T 13-10-2018 COP00_20985 4ec65b0ab07b11e5c14dbf04d4020e90 455 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 172 197 2.8E-64 T 13-10-2018 COP00_20985 4ec65b0ab07b11e5c14dbf04d4020e90 455 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 34 49 2.8E-64 T 13-10-2018 COP00_20985 4ec65b0ab07b11e5c14dbf04d4020e90 455 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 397 412 2.8E-64 T 13-10-2018 COP00_20985 4ec65b0ab07b11e5c14dbf04d4020e90 455 Gene3D G3DSA:3.50.50.60 148 264 1.0E-106 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily COP00_20985 4ec65b0ab07b11e5c14dbf04d4020e90 455 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 133 151 2.5E-37 T 13-10-2018 COP00_20985 4ec65b0ab07b11e5c14dbf04d4020e90 455 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 172 190 2.5E-37 T 13-10-2018 COP00_20985 4ec65b0ab07b11e5c14dbf04d4020e90 455 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 254 270 2.5E-37 T 13-10-2018 COP00_20985 4ec65b0ab07b11e5c14dbf04d4020e90 455 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 282 304 2.5E-37 T 13-10-2018 COP00_20985 4ec65b0ab07b11e5c14dbf04d4020e90 455 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 3 22 2.5E-37 T 13-10-2018 COP00_20985 4ec65b0ab07b11e5c14dbf04d4020e90 455 Gene3D G3DSA:3.30.390.30 335 455 2.9E-39 T 13-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 COP00_20985 4ec65b0ab07b11e5c14dbf04d4020e90 455 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 3 454 1.3E-159 T 13-10-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 COP00_20985 4ec65b0ab07b11e5c14dbf04d4020e90 455 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 336 444 7.4E-32 T 13-10-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 COP00_20985 4ec65b0ab07b11e5c14dbf04d4020e90 455 SUPERFAMILY SSF55424 335 454 5.15E-36 T 13-10-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain superfamily GO:0016491|GO:0050660|GO:0055114 COP00_20985 4ec65b0ab07b11e5c14dbf04d4020e90 455 Gene3D G3DSA:3.50.50.60 3 322 1.0E-106 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily COP00_20985 4ec65b0ab07b11e5c14dbf04d4020e90 455 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 317 2.2E-63 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 COP00_20985 4ec65b0ab07b11e5c14dbf04d4020e90 455 PIRSF PIRSF000350 1 453 4.5E-82 T 13-10-2018 IPR001100 Pyridine nucleotide-disulphide oxidoreductase, class I GO:0009055|GO:0016491 COP00_13130 80dcf7768e5e244340882292eb593117 280 Gene3D G3DSA:3.30.1180.10 152 279 2.9E-48 T 13-10-2018 COP00_13130 80dcf7768e5e244340882292eb593117 280 TIGRFAM TIGR00762 DegV: EDD domain protein, DegV family 4 278 4.0E-107 T 13-10-2018 IPR003797 DegV COP00_13130 80dcf7768e5e244340882292eb593117 280 Pfam PF02645 Uncharacterised protein, DegV family COG1307 3 278 3.3E-105 T 13-10-2018 IPR003797 DegV COP00_13130 80dcf7768e5e244340882292eb593117 280 SUPERFAMILY SSF82549 1 279 1.05E-96 T 13-10-2018 COP00_13130 80dcf7768e5e244340882292eb593117 280 Gene3D G3DSA:3.40.50.10170 1 151 1.1E-55 T 13-10-2018 COP00_23215 ab4f037f410b24b240f02e8e0bc9518e 608 TIGRFAM TIGR01931 cysJ: sulfite reductase [NADPH] flavoprotein, alpha-component 6 608 1.3E-270 T 13-10-2018 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 COP00_23215 ab4f037f410b24b240f02e8e0bc9518e 608 SUPERFAMILY SSF63380 227 453 2.91E-67 T 13-10-2018 IPR017938 Riboflavin synthase-like beta-barrel COP00_23215 ab4f037f410b24b240f02e8e0bc9518e 608 Pfam PF00175 Oxidoreductase NAD-binding domain 466 572 1.4E-17 T 13-10-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 COP00_23215 ab4f037f410b24b240f02e8e0bc9518e 608 SUPERFAMILY SSF52218 67 210 1.75E-49 T 13-10-2018 IPR029039 Flavoprotein-like superfamily COP00_23215 ab4f037f410b24b240f02e8e0bc9518e 608 SUPERFAMILY SSF52343 453 608 4.58E-52 T 13-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain COP00_23215 ab4f037f410b24b240f02e8e0bc9518e 608 Gene3D G3DSA:2.40.30.10 236 448 2.0E-76 T 13-10-2018 COP00_23215 ab4f037f410b24b240f02e8e0bc9518e 608 Pfam PF00258 Flavodoxin 71 194 1.2E-33 T 13-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 COP00_23215 ab4f037f410b24b240f02e8e0bc9518e 608 Pfam PF00667 FAD binding domain 236 431 1.1E-35 T 13-10-2018 IPR003097 Sulfite reductase [NADPH] flavoprotein alpha-component-like, FAD-binding GO:0016491|GO:0055114 COP00_23215 ab4f037f410b24b240f02e8e0bc9518e 608 PIRSF PIRSF000207 1 608 2.2E-269 T 13-10-2018 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 COP00_23215 ab4f037f410b24b240f02e8e0bc9518e 608 PRINTS PR00369 Flavodoxin signature 150 160 3.4E-16 T 13-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 COP00_23215 ab4f037f410b24b240f02e8e0bc9518e 608 PRINTS PR00369 Flavodoxin signature 174 193 3.4E-16 T 13-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 COP00_23215 ab4f037f410b24b240f02e8e0bc9518e 608 PRINTS PR00369 Flavodoxin signature 70 83 3.4E-16 T 13-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 COP00_23215 ab4f037f410b24b240f02e8e0bc9518e 608 PRINTS PR00369 Flavodoxin signature 118 129 3.4E-16 T 13-10-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 COP00_23215 ab4f037f410b24b240f02e8e0bc9518e 608 Gene3D G3DSA:3.40.50.360 62 218 2.8E-50 T 13-10-2018 IPR029039 Flavoprotein-like superfamily COP00_23215 ab4f037f410b24b240f02e8e0bc9518e 608 Gene3D G3DSA:1.20.990.10 284 393 2.0E-76 T 13-10-2018 IPR023173 NADPH-cytochrome p450 reductase, FAD-binding, alpha-helical domain superfamily GO:0016491|GO:0055114 COP00_23215 ab4f037f410b24b240f02e8e0bc9518e 608 Gene3D G3DSA:3.40.50.80 454 608 4.5E-60 T 13-10-2018 IPR039261 Ferredoxin-NADP reductase (FNR), nucleotide-binding domain COP00_23215 ab4f037f410b24b240f02e8e0bc9518e 608 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 274 284 4.6E-27 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 COP00_23215 ab4f037f410b24b240f02e8e0bc9518e 608 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 395 402 4.6E-27 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 COP00_23215 ab4f037f410b24b240f02e8e0bc9518e 608 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 503 514 4.6E-27 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 COP00_23215 ab4f037f410b24b240f02e8e0bc9518e 608 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 534 550 4.6E-27 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 COP00_23215 ab4f037f410b24b240f02e8e0bc9518e 608 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 557 565 4.6E-27 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 COP00_23215 ab4f037f410b24b240f02e8e0bc9518e 608 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 465 484 4.6E-27 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 COP00_23215 ab4f037f410b24b240f02e8e0bc9518e 608 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 490 499 4.6E-27 T 13-10-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 COP00_10770 9e5f5945e2fb2f8477aeee7c4118a481 433 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 183 205 - T 13-10-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 COP00_10770 9e5f5945e2fb2f8477aeee7c4118a481 433 Pfam PF01842 ACT domain 351 416 1.4E-13 T 13-10-2018 IPR002912 ACT domain COP00_10770 9e5f5945e2fb2f8477aeee7c4118a481 433 Gene3D G3DSA:3.30.360.10 136 343 2.0E-152 T 13-10-2018 COP00_10770 9e5f5945e2fb2f8477aeee7c4118a481 433 PIRSF PIRSF000098 1 430 1.7E-177 T 13-10-2018 IPR016204 Homoserine dehydrogenase GO:0004412|GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 COP00_10770 9e5f5945e2fb2f8477aeee7c4118a481 433 Gene3D G3DSA:3.30.70.260 344 418 2.0E-152 T 13-10-2018 COP00_10770 9e5f5945e2fb2f8477aeee7c4118a481 433 SUPERFAMILY SSF55347 137 302 2.62E-54 T 13-10-2018 COP00_10770 9e5f5945e2fb2f8477aeee7c4118a481 433 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 10 129 3.1E-27 T 13-10-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 COP00_10770 9e5f5945e2fb2f8477aeee7c4118a481 433 Gene3D G3DSA:3.40.50.720 4 336 2.0E-152 T 13-10-2018 COP00_10770 9e5f5945e2fb2f8477aeee7c4118a481 433 SUPERFAMILY SSF51735 2 158 5.65E-36 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily COP00_10770 9e5f5945e2fb2f8477aeee7c4118a481 433 SUPERFAMILY SSF55021 349 422 5.5E-12 T 13-10-2018 COP00_10770 9e5f5945e2fb2f8477aeee7c4118a481 433 Pfam PF00742 Homoserine dehydrogenase 137 315 5.6E-67 T 13-10-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 COP00_05470 83b3f974d833a24f94ade2d6ea07aaad 885 SUPERFAMILY SSF56601 243 692 9.13E-103 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like COP00_05470 83b3f974d833a24f94ade2d6ea07aaad 885 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 96 636 5.0E-173 T 13-10-2018 COP00_05470 83b3f974d833a24f94ade2d6ea07aaad 885 SUPERFAMILY SSF53955 74 288 1.86E-72 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily COP00_05470 83b3f974d833a24f94ade2d6ea07aaad 885 Gene3D G3DSA:3.40.710.10 329 647 4.5E-207 T 13-10-2018 COP00_05470 83b3f974d833a24f94ade2d6ea07aaad 885 Gene3D G3DSA:2.60.40.10 698 789 2.9E-10 T 13-10-2018 IPR013783 Immunoglobulin-like fold COP00_05470 83b3f974d833a24f94ade2d6ea07aaad 885 Pfam PF00912 Transglycosylase 86 261 6.5E-65 T 13-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 COP00_05470 83b3f974d833a24f94ade2d6ea07aaad 885 Gene3D G3DSA:3.90.1310.20 81 536 4.5E-207 T 13-10-2018 COP00_05470 83b3f974d833a24f94ade2d6ea07aaad 885 SMART SM00060 697 774 0.0061 T 13-10-2018 IPR003961 Fibronectin type III GO:0005515 COP00_05470 83b3f974d833a24f94ade2d6ea07aaad 885 Gene3D G3DSA:1.10.3810.10 96 288 4.5E-207 T 13-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 COP00_05470 83b3f974d833a24f94ade2d6ea07aaad 885 SUPERFAMILY SSF49265 699 780 1.01E-7 T 13-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 COP00_05470 83b3f974d833a24f94ade2d6ea07aaad 885 Pfam PF00905 Penicillin binding protein transpeptidase domain 355 609 1.1E-44 T 13-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 COP00_12845 d635d1cf400319bc34885d39bd918df8 209 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 115 201 20.697 T 13-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 COP00_12845 d635d1cf400319bc34885d39bd918df8 209 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 52 101 3.0E-21 T 13-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 COP00_12845 d635d1cf400319bc34885d39bd918df8 209 Gene3D G3DSA:1.10.287.1080 115 207 9.9E-33 T 13-10-2018 COP00_12845 d635d1cf400319bc34885d39bd918df8 209 SUPERFAMILY SSF141734 4 106 2.22E-47 T 13-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 COP00_12845 d635d1cf400319bc34885d39bd918df8 209 SUPERFAMILY SSF101386 117 205 2.8E-27 T 13-10-2018 COP00_12845 d635d1cf400319bc34885d39bd918df8 209 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 30 101 1.7E-34 T 13-10-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 COP00_12845 d635d1cf400319bc34885d39bd918df8 209 Hamap MF_01021 Phosphoribosyl-AMP cyclohydrolase [hisI]. 3 106 29.698 T 13-10-2018 IPR026660 Phosphoribosyl-AMP cyclohydrolase GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 COP00_12845 d635d1cf400319bc34885d39bd918df8 209 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 119 201 7.9E-32 T 13-10-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 COP00_12845 d635d1cf400319bc34885d39bd918df8 209 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 119 205 2.7E-18 T 13-10-2018 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 COP00_12845 d635d1cf400319bc34885d39bd918df8 209 Gene3D G3DSA:3.10.20.400 1 93 5.0E-41 T 13-10-2018 IPR038019 Phosphoribosyl-AMP cyclohydrolase domain superfamily KEGG: 00340+3.5.4.19 COP00_12845 d635d1cf400319bc34885d39bd918df8 209 Hamap MF_01019 Histidine biosynthesis bifunctional protein HisIE [hisI]. 5 206 38.366 T 13-10-2018 IPR023019 Histidine biosynthesis bifunctional protein HisIE GO:0000105|GO:0004635|GO:0004636 KEGG: 00340+3.6.1.31+3.5.4.19 COP00_16690 9fd16e32833c960975b5b82e0d9237b8 95 SUPERFAMILY SSF54189 2 91 6.83E-31 T 13-10-2018 IPR012678 Ribosomal protein L23/L15e core domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 COP00_16690 9fd16e32833c960975b5b82e0d9237b8 95 Gene3D G3DSA:3.30.70.330 1 95 1.1E-32 T 13-10-2018 IPR012677 Nucleotide-binding alpha-beta plait domain superfamily COP00_16690 9fd16e32833c960975b5b82e0d9237b8 95 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 5 95 21.503 T 13-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 COP00_16690 9fd16e32833c960975b5b82e0d9237b8 95 Pfam PF00276 Ribosomal protein L23 6 88 4.3E-32 T 13-10-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 COP00_16690 9fd16e32833c960975b5b82e0d9237b8 95 ProSitePatterns PS00050 Ribosomal protein L23 signature. 77 92 - T 13-10-2018 IPR001014 Ribosomal protein L23/L25, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 COP00_13825 6ba320e6679f515022e7ed9d1f2f8b4b 70 Pfam PF00137 ATP synthase subunit C 4 66 6.2E-15 T 13-10-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 COP00_13825 6ba320e6679f515022e7ed9d1f2f8b4b 70 SUPERFAMILY SSF81333 2 69 4.45E-20 T 13-10-2018 IPR035921 F/V-ATP synthase subunit C superfamily COP00_13825 6ba320e6679f515022e7ed9d1f2f8b4b 70 ProSitePatterns PS00605 ATP synthase c subunit signature. 33 54 - T 13-10-2018 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 COP00_13825 6ba320e6679f515022e7ed9d1f2f8b4b 70 Hamap MF_01396 ATP synthase subunit c [atpH]. 3 68 16.036 T 13-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 COP00_13825 6ba320e6679f515022e7ed9d1f2f8b4b 70 Gene3D G3DSA:1.20.20.10 1 68 1.7E-28 T 13-10-2018 IPR038662 F1F0 ATP synthase subunit C superfamily Reactome: R-HSA-163210|Reactome: R-HSA-8949613 COP00_13825 6ba320e6679f515022e7ed9d1f2f8b4b 70 PRINTS PR00124 ATP synthase C subunit signature 43 68 7.2E-20 T 13-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 COP00_13825 6ba320e6679f515022e7ed9d1f2f8b4b 70 PRINTS PR00124 ATP synthase C subunit signature 5 24 7.2E-20 T 13-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 COP00_13825 6ba320e6679f515022e7ed9d1f2f8b4b 70 PRINTS PR00124 ATP synthase C subunit signature 26 41 7.2E-20 T 13-10-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 COP00_13825 6ba320e6679f515022e7ed9d1f2f8b4b 70 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 14 69 9.8E-22 T 13-10-2018 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 COP00_03735 bf0cb14a4baf4481ff204539209ce5f2 260 TIGRFAM TIGR02415 23BDH: acetoin reductases 7 260 1.2E-114 T 13-10-2018 IPR014007 Acetoin reductase GO:0019152|GO:0045150|GO:0055114 KEGG: 00650+1.1.1.304|MetaCyc: PWY-6389 COP00_03735 bf0cb14a4baf4481ff204539209ce5f2 260 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 COP00_03735 bf0cb14a4baf4481ff204539209ce5f2 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 4.8E-10 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_03735 bf0cb14a4baf4481ff204539209ce5f2 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 4.8E-10 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_03735 bf0cb14a4baf4481ff204539209ce5f2 260 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 4.8E-10 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_03735 bf0cb14a4baf4481ff204539209ce5f2 260 SUPERFAMILY SSF51735 6 258 6.44E-83 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily COP00_03735 bf0cb14a4baf4481ff204539209ce5f2 260 Gene3D G3DSA:3.40.50.720 6 260 7.6E-89 T 13-10-2018 COP00_03735 bf0cb14a4baf4481ff204539209ce5f2 260 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 257 5.6E-60 T 13-10-2018 COP00_03735 bf0cb14a4baf4481ff204539209ce5f2 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 3.3E-37 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_03735 bf0cb14a4baf4481ff204539209ce5f2 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 3.3E-37 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_03735 bf0cb14a4baf4481ff204539209ce5f2 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 3.3E-37 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_03735 bf0cb14a4baf4481ff204539209ce5f2 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 221 241 3.3E-37 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_03735 bf0cb14a4baf4481ff204539209ce5f2 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 3.3E-37 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_03735 bf0cb14a4baf4481ff204539209ce5f2 260 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 3.3E-37 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_06985 88720cb247aff3639f7726c58f7fbd4e 186 Gene3D G3DSA:3.40.50.10420 1 186 3.2E-63 T 13-10-2018 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily COP00_06985 88720cb247aff3639f7726c58f7fbd4e 186 PIRSF PIRSF006806 1 182 7.0E-50 T 13-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase COP00_06985 88720cb247aff3639f7726c58f7fbd4e 186 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 2 179 8.6E-56 T 13-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase COP00_06985 88720cb247aff3639f7726c58f7fbd4e 186 SUPERFAMILY SSF100950 2 185 1.95E-49 T 13-10-2018 IPR037171 NagB/RpiA transferase-like COP00_06985 88720cb247aff3639f7726c58f7fbd4e 186 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 2 179 7.8E-48 T 13-10-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase COP00_20230 971e68bed442cfe1eb8ffc9ea03c6a21 190 Gene3D G3DSA:3.40.50.170 1 189 2.8E-72 T 13-10-2018 COP00_20230 971e68bed442cfe1eb8ffc9ea03c6a21 190 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 3 187 4.8E-73 T 13-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 COP00_20230 971e68bed442cfe1eb8ffc9ea03c6a21 190 SUPERFAMILY SSF53328 3 187 5.76E-61 T 13-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 COP00_20230 971e68bed442cfe1eb8ffc9ea03c6a21 190 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 3 188 30.693 T 13-10-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 COP00_20230 971e68bed442cfe1eb8ffc9ea03c6a21 190 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 134 157 - T 13-10-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 COP00_20230 971e68bed442cfe1eb8ffc9ea03c6a21 190 Pfam PF00551 Formyl transferase 3 182 6.6E-63 T 13-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 COP00_01635 e2e75af3cf43815d917852a14cfc35a6 197 TIGRFAM TIGR02852 spore_dpaB: dipicolinic acid synthetase, B subunit 7 193 3.0E-103 T 13-10-2018 IPR014214 Dipicolinic acid synthetase, subunit B COP00_01635 e2e75af3cf43815d917852a14cfc35a6 197 Pfam PF02441 Flavoprotein 7 168 1.9E-19 T 13-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 COP00_01635 e2e75af3cf43815d917852a14cfc35a6 197 Gene3D G3DSA:3.40.50.1950 2 197 2.4E-58 T 13-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 COP00_01635 e2e75af3cf43815d917852a14cfc35a6 197 PIRSF PIRSF001390 1 197 1.2E-80 T 13-10-2018 IPR014214 Dipicolinic acid synthetase, subunit B COP00_01635 e2e75af3cf43815d917852a14cfc35a6 197 SUPERFAMILY SSF52507 7 194 2.62E-29 T 13-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 COP00_09420 feca3e88753e0dc01838550c5bbef109 357 Gene3D G3DSA:3.40.630.10 11 339 8.0E-120 T 13-10-2018 COP00_09420 feca3e88753e0dc01838550c5bbef109 357 PIRSF PIRSF001123 2 356 5.1E-149 T 13-10-2018 IPR008007 Peptidase M42 COP00_09420 feca3e88753e0dc01838550c5bbef109 357 Gene3D G3DSA:2.40.30.40 75 162 8.0E-120 T 13-10-2018 IPR023367 Peptidase M42, domain 2 COP00_09420 feca3e88753e0dc01838550c5bbef109 357 SUPERFAMILY SSF101821 71 180 1.4E-32 T 13-10-2018 COP00_09420 feca3e88753e0dc01838550c5bbef109 357 SUPERFAMILY SSF53187 5 347 1.52E-70 T 13-10-2018 COP00_09420 feca3e88753e0dc01838550c5bbef109 357 Pfam PF05343 M42 glutamyl aminopeptidase 46 337 2.9E-113 T 13-10-2018 IPR008007 Peptidase M42 COP00_20485 8c8f6058965172f9d3eae2290843c68d 485 Gene3D G3DSA:3.40.605.10 12 472 3.7E-157 T 13-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 COP00_20485 8c8f6058965172f9d3eae2290843c68d 485 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 252 259 - T 13-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 COP00_20485 8c8f6058965172f9d3eae2290843c68d 485 Pfam PF00171 Aldehyde dehydrogenase family 16 474 1.2E-160 T 13-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 COP00_20485 8c8f6058965172f9d3eae2290843c68d 485 SUPERFAMILY SSF53720 7 478 2.09E-154 T 13-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 COP00_20485 8c8f6058965172f9d3eae2290843c68d 485 Gene3D G3DSA:3.40.309.10 257 444 3.7E-157 T 13-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 COP00_20315 53b0ef9af8ad53707337649dc8e869aa 485 Pfam PF01425 Amidase 24 465 5.3E-165 T 13-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 COP00_20315 53b0ef9af8ad53707337649dc8e869aa 485 TIGRFAM TIGR00132 gatA: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit 12 477 1.1E-211 T 13-10-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 COP00_20315 53b0ef9af8ad53707337649dc8e869aa 485 Hamap MF_00120 Glutamyl-tRNA(Gln) amidotransferase subunit A [gatA]. 11 477 97.408 T 13-10-2018 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit GO:0006412|GO:0030956|GO:0050567 KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 COP00_20315 53b0ef9af8ad53707337649dc8e869aa 485 Gene3D G3DSA:3.90.1300.10 2 485 3.6E-204 T 13-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 COP00_20315 53b0ef9af8ad53707337649dc8e869aa 485 ProSitePatterns PS00571 Amidases signature. 152 183 - T 13-10-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 COP00_20315 53b0ef9af8ad53707337649dc8e869aa 485 SUPERFAMILY SSF75304 1 483 3.01E-170 T 13-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 COP00_22570 c5573ab499974a1c9ff16383482ebd1b 190 Gene3D G3DSA:3.40.630.30 2 184 3.1E-39 T 13-10-2018 COP00_22570 c5573ab499974a1c9ff16383482ebd1b 190 Pfam PF13302 Acetyltransferase (GNAT) domain 9 150 2.7E-18 T 13-10-2018 IPR000182 GNAT domain COP00_22570 c5573ab499974a1c9ff16383482ebd1b 190 SUPERFAMILY SSF55729 4 175 2.7E-37 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase COP00_12065 d0dc30638c0e4ddff22970146beb4d33 278 ProSitePatterns PS00552 MerR-type HTH domain signature. 5 27 - T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 COP00_12065 d0dc30638c0e4ddff22970146beb4d33 278 SUPERFAMILY SSF55136 121 269 6.02E-5 T 13-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily COP00_12065 d0dc30638c0e4ddff22970146beb4d33 278 Gene3D G3DSA:1.10.1660.10 1 119 8.6E-26 T 13-10-2018 COP00_12065 d0dc30638c0e4ddff22970146beb4d33 278 Gene3D G3DSA:3.20.80.10 120 270 2.2E-12 T 13-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily COP00_12065 d0dc30638c0e4ddff22970146beb4d33 278 SUPERFAMILY SSF46955 2 107 1.77E-26 T 13-10-2018 IPR009061 Putative DNA-binding domain superfamily COP00_12065 d0dc30638c0e4ddff22970146beb4d33 278 SMART SM00422 2 72 9.6E-20 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 COP00_12065 d0dc30638c0e4ddff22970146beb4d33 278 SMART SM00871 120 268 0.0015 T 13-10-2018 IPR010499 Bacterial transcription activator, effector binding COP00_12065 d0dc30638c0e4ddff22970146beb4d33 278 Pfam PF13411 MerR HTH family regulatory protein 2 71 4.4E-16 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 COP00_14355 ae8c618207d56fd99708dfde9299c9e2 330 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 252 3.9E-60 T 13-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 COP00_14355 ae8c618207d56fd99708dfde9299c9e2 330 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 2 326 7.8E-141 T 13-10-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 COP00_14355 ae8c618207d56fd99708dfde9299c9e2 330 SUPERFAMILY SSF51735 3 328 7.25E-103 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily COP00_14355 ae8c618207d56fd99708dfde9299c9e2 330 Gene3D G3DSA:3.90.25.10 185 320 5.6E-133 T 13-10-2018 COP00_14355 ae8c618207d56fd99708dfde9299c9e2 330 Gene3D G3DSA:3.40.50.720 3 264 5.6E-133 T 13-10-2018 COP00_07560 20f87099581fee52af5872c592837e3b 142 SUPERFAMILY SSF49764 38 132 5.93E-15 T 13-10-2018 IPR008978 HSP20-like chaperone COP00_07560 20f87099581fee52af5872c592837e3b 142 Pfam PF00011 Hsp20/alpha crystallin family 48 134 2.4E-9 T 13-10-2018 IPR002068 Alpha crystallin/Hsp20 domain COP00_07560 20f87099581fee52af5872c592837e3b 142 Gene3D G3DSA:2.60.40.790 9 137 9.5E-14 T 13-10-2018 IPR008978 HSP20-like chaperone COP00_23610 a2c9061c24aea833e73f6cd5e378723b 67 Pfam PF04545 Sigma-70, region 4 4 31 6.1E-6 T 13-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 COP00_23610 a2c9061c24aea833e73f6cd5e378723b 67 Gene3D G3DSA:1.10.260.40 1 58 9.8E-7 T 13-10-2018 COP00_23610 a2c9061c24aea833e73f6cd5e378723b 67 SUPERFAMILY SSF47413 2 55 9.27E-8 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 COP00_05080 dd58cce7966c0be7aab371aa3e7c73fb 93 TIGRFAM TIGR03829 YokU_near_AblA: uncharacterized protein, YokU family 3 91 5.4E-45 T 13-10-2018 IPR022451 Conserved hypothetical protein CHP03829, YokU COP00_05080 dd58cce7966c0be7aab371aa3e7c73fb 93 Pfam PF14122 YokU-like protein, putative antitoxin 3 89 2.0E-41 T 13-10-2018 IPR022451 Conserved hypothetical protein CHP03829, YokU COP00_05080 dd58cce7966c0be7aab371aa3e7c73fb 93 TIGRFAM TIGR03831 YgiT_finger: YgiT-type zinc finger domain 4 51 2.3E-11 T 13-10-2018 IPR022453 Zinc finger, MqsA-type COP00_03170 9be799411bb73c9fceee284de1b71a5f 185 Pfam PF07352 Bacteriophage Mu Gam like protein 31 185 1.2E-35 T 13-10-2018 IPR009951 Host-nuclease inhibitor protein Gam GO:0003690|GO:0042262 COP00_03170 9be799411bb73c9fceee284de1b71a5f 185 SUPERFAMILY SSF161266 25 185 1.02E-22 T 13-10-2018 COP00_03170 9be799411bb73c9fceee284de1b71a5f 185 PIRSF PIRSF015195 1 185 3.6E-83 T 13-10-2018 IPR009859 Protein of unknown function, Gam-like COP00_03870 26315a855d07fee071163d0e92c5ef67 871 Gene3D G3DSA:3.30.1490.20 1 184 1.2E-67 T 13-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 COP00_03870 26315a855d07fee071163d0e92c5ef67 871 SUPERFAMILY SSF56059 1 342 1.29E-94 T 13-10-2018 COP00_03870 26315a855d07fee071163d0e92c5ef67 871 Gene3D G3DSA:3.50.30.10 767 870 5.4E-32 T 13-10-2018 COP00_03870 26315a855d07fee071163d0e92c5ef67 871 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 18 315 2.8E-93 T 13-10-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 COP00_03870 26315a855d07fee071163d0e92c5ef67 871 Gene3D G3DSA:3.30.470.20 185 314 6.5E-45 T 13-10-2018 COP00_03870 26315a855d07fee071163d0e92c5ef67 871 SUPERFAMILY SSF52009 762 868 5.36E-28 T 13-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 COP00_03870 26315a855d07fee071163d0e92c5ef67 871 Pfam PF00391 PEP-utilising enzyme, mobile domain 794 865 6.3E-22 T 13-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 COP00_09005 1628b47d57dc02d571e4f332fab9f7c5 643 Gene3D G3DSA:3.30.930.10 227 540 5.5E-116 T 13-10-2018 COP00_09005 1628b47d57dc02d571e4f332fab9f7c5 643 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 75 640 4.4E-245 T 13-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 COP00_09005 1628b47d57dc02d571e4f332fab9f7c5 643 SUPERFAMILY SSF55186 67 243 3.66E-67 T 13-10-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily GO:0000166 COP00_09005 1628b47d57dc02d571e4f332fab9f7c5 643 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 172 221 2.8E-17 T 13-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 COP00_09005 1628b47d57dc02d571e4f332fab9f7c5 643 SMART SM00863 172 221 1.6E-25 T 13-10-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0004812|GO:0005524|GO:0043039 COP00_09005 1628b47d57dc02d571e4f332fab9f7c5 643 Pfam PF02824 TGS domain 5 64 3.1E-12 T 13-10-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 COP00_09005 1628b47d57dc02d571e4f332fab9f7c5 643 SUPERFAMILY SSF55681 245 534 1.69E-96 T 13-10-2018 COP00_09005 1628b47d57dc02d571e4f332fab9f7c5 643 Gene3D G3DSA:3.30.980.10 72 224 4.3E-67 T 13-10-2018 COP00_09005 1628b47d57dc02d571e4f332fab9f7c5 643 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 327 536 4.4E-34 T 13-10-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 COP00_09005 1628b47d57dc02d571e4f332fab9f7c5 643 Pfam PF03129 Anticodon binding domain 549 636 5.5E-25 T 13-10-2018 IPR004154 Anticodon-binding COP00_09005 1628b47d57dc02d571e4f332fab9f7c5 643 Gene3D G3DSA:3.10.20.30 2 66 8.0E-26 T 13-10-2018 IPR012675 Beta-grasp domain superfamily COP00_09005 1628b47d57dc02d571e4f332fab9f7c5 643 SUPERFAMILY SSF52954 535 637 7.25E-31 T 13-10-2018 COP00_09005 1628b47d57dc02d571e4f332fab9f7c5 643 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 69 643 35.53 T 13-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 COP00_09005 1628b47d57dc02d571e4f332fab9f7c5 643 SUPERFAMILY SSF81271 5 64 2.83E-16 T 13-10-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 COP00_09005 1628b47d57dc02d571e4f332fab9f7c5 643 Gene3D G3DSA:3.40.50.800 541 643 1.3E-34 T 13-10-2018 IPR036621 Anticodon-binding domain superfamily COP00_09005 1628b47d57dc02d571e4f332fab9f7c5 643 PRINTS PR01047 Threonyl-tRNA synthetase signature 472 500 3.1E-47 T 13-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 COP00_09005 1628b47d57dc02d571e4f332fab9f7c5 643 PRINTS PR01047 Threonyl-tRNA synthetase signature 333 361 3.1E-47 T 13-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 COP00_09005 1628b47d57dc02d571e4f332fab9f7c5 643 PRINTS PR01047 Threonyl-tRNA synthetase signature 366 389 3.1E-47 T 13-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 COP00_09005 1628b47d57dc02d571e4f332fab9f7c5 643 PRINTS PR01047 Threonyl-tRNA synthetase signature 515 528 3.1E-47 T 13-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 COP00_09005 1628b47d57dc02d571e4f332fab9f7c5 643 PRINTS PR01047 Threonyl-tRNA synthetase signature 542 554 3.1E-47 T 13-10-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 COP00_09005 1628b47d57dc02d571e4f332fab9f7c5 643 Gene3D G3DSA:3.30.54.20 133 189 4.3E-67 T 13-10-2018 COP00_17780 19467c0a55368ddae1a7aab44a0dd425 252 Gene3D G3DSA:1.10.1660.10 1 139 1.1E-53 T 13-10-2018 COP00_17780 19467c0a55368ddae1a7aab44a0dd425 252 Pfam PF13411 MerR HTH family regulatory protein 4 70 2.0E-17 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 COP00_17780 19467c0a55368ddae1a7aab44a0dd425 252 SUPERFAMILY SSF46955 3 113 4.76E-31 T 13-10-2018 IPR009061 Putative DNA-binding domain superfamily COP00_17780 19467c0a55368ddae1a7aab44a0dd425 252 Gene3D G3DSA:1.10.490.50 158 249 1.7E-20 T 13-10-2018 IPR036244 TipA-like multidrug resistance regulator, antibiotic-recognition domain COP00_17780 19467c0a55368ddae1a7aab44a0dd425 252 Pfam PF07739 TipAS antibiotic-recognition domain 130 244 6.7E-33 T 13-10-2018 IPR012925 TipAS antibiotic-recognition domain COP00_17780 19467c0a55368ddae1a7aab44a0dd425 252 SMART SM00422 3 72 3.2E-28 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 COP00_17780 19467c0a55368ddae1a7aab44a0dd425 252 SUPERFAMILY SSF89082 161 248 6.41E-27 T 13-10-2018 IPR036244 TipA-like multidrug resistance regulator, antibiotic-recognition domain COP00_12815 9267171ac4db26b671445f048f6248fa 316 TIGRFAM TIGR00647 DNA_bind_WhiA: DNA-binding protein WhiA 4 305 7.5E-133 T 13-10-2018 IPR033981 Sporulation regulator WhiA-like COP00_12815 9267171ac4db26b671445f048f6248fa 316 SUPERFAMILY SSF55608 120 221 4.7E-19 T 13-10-2018 IPR027434 Homing endonuclease COP00_12815 9267171ac4db26b671445f048f6248fa 316 Pfam PF14527 WhiA LAGLIDADG-like domain 125 217 1.0E-36 T 13-10-2018 IPR039518 WhiA, LAGLIDADG-like domain COP00_12815 9267171ac4db26b671445f048f6248fa 316 Gene3D G3DSA:1.10.10.10 215 308 6.0E-37 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_12815 9267171ac4db26b671445f048f6248fa 316 Pfam PF10298 WhiA N-terminal LAGLIDADG-like domain 18 103 3.9E-37 T 13-10-2018 IPR018478 Sporulation transcription regulator WhiA, N-terminal domain COP00_12815 9267171ac4db26b671445f048f6248fa 316 Hamap MF_01420 Putative sporulation transcription regulator WhiA [whiA]. 3 307 35.633 T 13-10-2018 IPR003802 Sporulation regulator WhiA GO:0043937 COP00_12815 9267171ac4db26b671445f048f6248fa 316 Pfam PF02650 WhiA C-terminal HTH domain 220 304 2.1E-35 T 13-10-2018 IPR023054 Sporulation regulator WhiA, C-terminal COP00_12815 9267171ac4db26b671445f048f6248fa 316 Gene3D G3DSA:3.10.28.10 1 214 1.9E-67 T 13-10-2018 IPR027434 Homing endonuclease COP00_24515 6c0f6ba8b00444cf08546787d476f3c2 432 TIGRFAM TIGR01537 portal_HK97: phage portal protein, HK97 family 41 373 4.8E-80 T 13-10-2018 IPR006427 Phage portal protein, HK97 COP00_24515 6c0f6ba8b00444cf08546787d476f3c2 432 Pfam PF04860 Phage portal protein 49 367 1.4E-73 T 13-10-2018 IPR006944 Bacteriophage/Gene transfer agent portal protein COP00_12395 6c0f6ba8b00444cf08546787d476f3c2 432 TIGRFAM TIGR01537 portal_HK97: phage portal protein, HK97 family 41 373 4.8E-80 T 13-10-2018 IPR006427 Phage portal protein, HK97 COP00_12395 6c0f6ba8b00444cf08546787d476f3c2 432 Pfam PF04860 Phage portal protein 49 367 1.4E-73 T 13-10-2018 IPR006944 Bacteriophage/Gene transfer agent portal protein COP00_04740 ea673e909673aa88c0e59109defaefcc 871 Pfam PF00668 Condensation domain 31 463 1.2E-131 T 13-10-2018 IPR001242 Condensation domain COP00_04740 ea673e909673aa88c0e59109defaefcc 871 SUPERFAMILY SSF52777 207 451 7.89E-64 T 13-10-2018 COP00_04740 ea673e909673aa88c0e59109defaefcc 871 Gene3D G3DSA:3.30.559.30 202 448 1.0E-156 T 13-10-2018 COP00_04740 ea673e909673aa88c0e59109defaefcc 871 ProSitePatterns PS00455 Putative AMP-binding domain signature. 623 634 - T 13-10-2018 IPR020845 AMP-binding, conserved site COP00_04740 ea673e909673aa88c0e59109defaefcc 871 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 504 842 8.2E-106 T 13-10-2018 IPR010071 Amino acid adenylation domain COP00_04740 ea673e909673aa88c0e59109defaefcc 871 Pfam PF00501 AMP-binding enzyme 483 840 6.7E-92 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 COP00_04740 ea673e909673aa88c0e59109defaefcc 871 SUPERFAMILY SSF56801 441 841 6.54E-111 T 13-10-2018 COP00_04740 ea673e909673aa88c0e59109defaefcc 871 Gene3D G3DSA:3.40.50.12780 472 856 6.3E-126 T 13-10-2018 COP00_04740 ea673e909673aa88c0e59109defaefcc 871 SUPERFAMILY SSF52777 27 218 1.0E-44 T 13-10-2018 COP00_04740 ea673e909673aa88c0e59109defaefcc 871 PRINTS PR00154 AMP-binding signature 630 638 8.5E-5 T 13-10-2018 IPR020459 AMP-binding COP00_04740 ea673e909673aa88c0e59109defaefcc 871 PRINTS PR00154 AMP-binding signature 618 629 8.5E-5 T 13-10-2018 IPR020459 AMP-binding COP00_04740 ea673e909673aa88c0e59109defaefcc 871 Gene3D G3DSA:3.30.559.10 34 392 1.0E-156 T 13-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 COP00_16540 1d41aa89133e0b79a60b363fcc753381 459 PRINTS PR01874 DNA repair protein radA signature 213 241 1.8E-94 T 13-10-2018 COP00_16540 1d41aa89133e0b79a60b363fcc753381 459 PRINTS PR01874 DNA repair protein radA signature 10 34 1.8E-94 T 13-10-2018 COP00_16540 1d41aa89133e0b79a60b363fcc753381 459 PRINTS PR01874 DNA repair protein radA signature 124 141 1.8E-94 T 13-10-2018 COP00_16540 1d41aa89133e0b79a60b363fcc753381 459 PRINTS PR01874 DNA repair protein radA signature 82 110 1.8E-94 T 13-10-2018 COP00_16540 1d41aa89133e0b79a60b363fcc753381 459 PRINTS PR01874 DNA repair protein radA signature 322 345 1.8E-94 T 13-10-2018 COP00_16540 1d41aa89133e0b79a60b363fcc753381 459 PRINTS PR01874 DNA repair protein radA signature 248 274 1.8E-94 T 13-10-2018 COP00_16540 1d41aa89133e0b79a60b363fcc753381 459 PRINTS PR01874 DNA repair protein radA signature 174 198 1.8E-94 T 13-10-2018 COP00_16540 1d41aa89133e0b79a60b363fcc753381 459 SMART SM00382 90 244 1.7E-8 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_16540 1d41aa89133e0b79a60b363fcc753381 459 Hamap MF_01498 DNA repair protein RadA [radA]. 21 456 45.714 T 13-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 COP00_16540 1d41aa89133e0b79a60b363fcc753381 459 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 452 1.1E-228 T 13-10-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 COP00_16540 1d41aa89133e0b79a60b363fcc753381 459 Pfam PF13541 Subunit ChlI of Mg-chelatase 366 430 7.3E-9 T 13-10-2018 COP00_16540 1d41aa89133e0b79a60b363fcc753381 459 Pfam PF13481 AAA domain 68 222 2.3E-17 T 13-10-2018 COP00_16540 1d41aa89133e0b79a60b363fcc753381 459 SUPERFAMILY SSF54211 255 455 7.59E-44 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold COP00_16540 1d41aa89133e0b79a60b363fcc753381 459 SUPERFAMILY SSF52540 69 291 4.83E-51 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_16540 1d41aa89133e0b79a60b363fcc753381 459 Gene3D G3DSA:3.40.50.300 65 285 1.5E-44 T 13-10-2018 COP00_16540 1d41aa89133e0b79a60b363fcc753381 459 Gene3D G3DSA:3.30.230.10 297 456 3.0E-21 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup COP00_21980 2dc989660142f2fa9aa253ae15c18751 673 ProSitePatterns PS00211 ABC transporters family signature. 567 581 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 COP00_21980 2dc989660142f2fa9aa253ae15c18751 673 SUPERFAMILY SSF52540 424 665 7.35E-86 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_21980 2dc989660142f2fa9aa253ae15c18751 673 Pfam PF00005 ABC transporter 446 595 2.1E-32 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 COP00_21980 2dc989660142f2fa9aa253ae15c18751 673 Gene3D G3DSA:1.20.1560.10 136 413 9.0E-65 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 COP00_21980 2dc989660142f2fa9aa253ae15c18751 673 SUPERFAMILY SSF90123 2 416 8.11E-71 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 COP00_21980 2dc989660142f2fa9aa253ae15c18751 673 Gene3D G3DSA:3.40.50.300 425 670 8.2E-87 T 13-10-2018 COP00_21980 2dc989660142f2fa9aa253ae15c18751 673 SMART SM00382 455 647 1.9E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_21980 2dc989660142f2fa9aa253ae15c18751 673 Pfam PF00664 ABC transporter transmembrane region 151 384 1.8E-41 T 13-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 COP00_06010 5c5cbf4f38f2ef3d5097dc0c19717e9f 145 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 40 57 - T 13-10-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 COP00_06010 5c5cbf4f38f2ef3d5097dc0c19717e9f 145 PIRSF PIRSF001467 2 144 8.4E-41 T 13-10-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 COP00_06010 5c5cbf4f38f2ef3d5097dc0c19717e9f 145 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 45 57 1.8E-25 T 13-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 COP00_06010 5c5cbf4f38f2ef3d5097dc0c19717e9f 145 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 100 112 1.8E-25 T 13-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 COP00_06010 5c5cbf4f38f2ef3d5097dc0c19717e9f 145 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 85 100 1.8E-25 T 13-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 COP00_06010 5c5cbf4f38f2ef3d5097dc0c19717e9f 145 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 19 34 1.8E-25 T 13-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 COP00_06010 5c5cbf4f38f2ef3d5097dc0c19717e9f 145 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 113 128 1.8E-25 T 13-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 COP00_06010 5c5cbf4f38f2ef3d5097dc0c19717e9f 145 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 10 136 1.3E-40 T 13-10-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755 COP00_06010 5c5cbf4f38f2ef3d5097dc0c19717e9f 145 Gene3D G3DSA:2.40.100.10 1 145 3.8E-59 T 13-10-2018 IPR029000 Cyclophilin-like domain superfamily COP00_06010 5c5cbf4f38f2ef3d5097dc0c19717e9f 145 SUPERFAMILY SSF50891 10 137 4.24E-47 T 13-10-2018 IPR029000 Cyclophilin-like domain superfamily COP00_22995 d8b7aced34ab84b208b88b1789968d58 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 135 151 2.1E-12 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_22995 d8b7aced34ab84b208b88b1789968d58 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 161 180 2.1E-12 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_22995 d8b7aced34ab84b208b88b1789968d58 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 182 199 2.1E-12 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_22995 d8b7aced34ab84b208b88b1789968d58 258 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 217 237 2.1E-12 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_22995 d8b7aced34ab84b208b88b1789968d58 258 PIRSF PIRSF000094 2 258 2.4E-104 T 13-10-2018 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 COP00_22995 d8b7aced34ab84b208b88b1789968d58 258 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 254 7.5E-87 T 13-10-2018 COP00_22995 d8b7aced34ab84b208b88b1789968d58 258 Gene3D G3DSA:3.40.50.720 1 257 5.1E-59 T 13-10-2018 COP00_22995 d8b7aced34ab84b208b88b1789968d58 258 SUPERFAMILY SSF51735 6 255 8.36E-65 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily COP00_01200 9000ec41870be7b199b1743f286e2e49 330 Gene3D G3DSA:3.40.718.10 1 330 1.8E-141 T 13-10-2018 COP00_01200 9000ec41870be7b199b1743f286e2e49 330 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 1 327 4.9E-142 T 13-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 COP00_01200 9000ec41870be7b199b1743f286e2e49 330 PIRSF PIRSF002465 1 330 1.2E-128 T 13-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 COP00_01200 9000ec41870be7b199b1743f286e2e49 330 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 330 151.411 T 13-10-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 COP00_01200 9000ec41870be7b199b1743f286e2e49 330 Pfam PF02504 Fatty acid synthesis protein 1 318 9.9E-130 T 13-10-2018 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 COP00_01200 9000ec41870be7b199b1743f286e2e49 330 SUPERFAMILY SSF53659 1 326 6.17E-105 T 13-10-2018 COP00_22110 36f81431f2471b22f99744363798408d 287 Gene3D G3DSA:3.10.50.40 135 226 8.2E-38 T 13-10-2018 COP00_22110 36f81431f2471b22f99744363798408d 287 Gene3D G3DSA:1.10.4030.30 55 242 8.2E-38 T 13-10-2018 COP00_22110 36f81431f2471b22f99744363798408d 287 SUPERFAMILY SSF109998 26 164 1.29E-17 T 13-10-2018 IPR027304 Trigger factor/SurA domain superfamily COP00_22110 36f81431f2471b22f99744363798408d 287 Pfam PF13616 PPIC-type PPIASE domain 134 225 1.8E-26 T 13-10-2018 COP00_22110 36f81431f2471b22f99744363798408d 287 Hamap MF_01145 Foldase protein PrsA [prsA]. 2 279 20.575 T 13-10-2018 IPR023059 Foldase protein PrsA GO:0003755 COP00_22110 36f81431f2471b22f99744363798408d 287 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 163 183 - T 13-10-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 COP00_22110 36f81431f2471b22f99744363798408d 287 SUPERFAMILY SSF54534 120 223 2.75E-31 T 13-10-2018 COP00_20115 419c46f4adda84a859cab471f0e4f022 182 SUPERFAMILY SSF51306 27 181 5.65E-54 T 13-10-2018 IPR036286 LexA/Signal peptidase-like superfamily COP00_20115 419c46f4adda84a859cab471f0e4f022 182 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 135 154 2.8E-21 T 13-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 COP00_20115 419c46f4adda84a859cab471f0e4f022 182 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 29 45 2.8E-21 T 13-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 COP00_20115 419c46f4adda84a859cab471f0e4f022 182 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 76 88 2.8E-21 T 13-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 COP00_20115 419c46f4adda84a859cab471f0e4f022 182 ProSitePatterns PS00761 Signal peptidases I signature 3. 140 153 - T 13-10-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 COP00_20115 419c46f4adda84a859cab471f0e4f022 182 Gene3D G3DSA:2.10.109.10 55 180 1.8E-45 T 13-10-2018 COP00_20115 419c46f4adda84a859cab471f0e4f022 182 ProSitePatterns PS00501 Signal peptidases I serine active site. 38 45 - T 13-10-2018 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 COP00_20115 419c46f4adda84a859cab471f0e4f022 182 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 12 176 1.4E-50 T 13-10-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 COP00_20115 419c46f4adda84a859cab471f0e4f022 182 ProSitePatterns PS00760 Signal peptidases I lysine active site. 78 90 - T 13-10-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 COP00_20115 419c46f4adda84a859cab471f0e4f022 182 Pfam PF00717 Peptidase S24-like 35 100 9.9E-22 T 13-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C COP00_08270 c0af398a990c26cc12974c9084bef931 741 Pfam PF07549 SecD/SecF GG Motif 470 491 1.8E-4 T 13-10-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site COP00_08270 c0af398a990c26cc12974c9084bef931 741 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 1 420 33.811 T 13-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 COP00_08270 c0af398a990c26cc12974c9084bef931 741 PRINTS PR01755 Bacterial translocase SecF protein signature 584 598 1.1E-24 T 13-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial COP00_08270 c0af398a990c26cc12974c9084bef931 741 PRINTS PR01755 Bacterial translocase SecF protein signature 632 650 1.1E-24 T 13-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial COP00_08270 c0af398a990c26cc12974c9084bef931 741 PRINTS PR01755 Bacterial translocase SecF protein signature 474 489 1.1E-24 T 13-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial COP00_08270 c0af398a990c26cc12974c9084bef931 741 PRINTS PR01755 Bacterial translocase SecF protein signature 667 682 1.1E-24 T 13-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial COP00_08270 c0af398a990c26cc12974c9084bef931 741 SUPERFAMILY SSF82866 215 413 4.32E-41 T 13-10-2018 COP00_08270 c0af398a990c26cc12974c9084bef931 741 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 476 719 4.8E-68 T 13-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 COP00_08270 c0af398a990c26cc12974c9084bef931 741 Gene3D G3DSA:1.20.1640.10 422 473 1.0E-14 T 13-10-2018 COP00_08270 c0af398a990c26cc12974c9084bef931 741 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 183 398 8.7E-58 T 13-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial COP00_08270 c0af398a990c26cc12974c9084bef931 741 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 554 716 7.6E-50 T 13-10-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial COP00_08270 c0af398a990c26cc12974c9084bef931 741 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 447 730 25.17 T 13-10-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 COP00_08270 c0af398a990c26cc12974c9084bef931 741 Pfam PF02355 Protein export membrane protein 551 727 4.3E-66 T 13-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial COP00_08270 c0af398a990c26cc12974c9084bef931 741 Pfam PF02355 Protein export membrane protein 241 406 2.2E-13 T 13-10-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial COP00_08270 c0af398a990c26cc12974c9084bef931 741 Gene3D G3DSA:1.20.1640.10 249 421 1.0E-14 T 13-10-2018 COP00_08270 c0af398a990c26cc12974c9084bef931 741 Gene3D G3DSA:1.20.1640.10 541 739 5.4E-8 T 13-10-2018 COP00_08270 c0af398a990c26cc12974c9084bef931 741 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 33 405 6.2E-116 T 13-10-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 COP00_08270 c0af398a990c26cc12974c9084bef931 741 SUPERFAMILY SSF82866 554 732 1.57E-36 T 13-10-2018 COP00_08270 c0af398a990c26cc12974c9084bef931 741 Gene3D G3DSA:3.30.70.3400 33 121 4.5E-21 T 13-10-2018 COP00_16530 10ac76e83b151f7a555b77a55e49dc70 363 Hamap MF_00602 Protein-arginine kinase [mcsB]. 13 350 40.571 T 13-10-2018 IPR023660 Protein arginine kinase GO:0016775 COP00_16530 10ac76e83b151f7a555b77a55e49dc70 363 Pfam PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain 67 253 2.8E-74 T 13-10-2018 IPR022414 ATP:guanido phosphotransferase, catalytic domain GO:0016301|GO:0016772 Reactome: R-HSA-71288 COP00_16530 10ac76e83b151f7a555b77a55e49dc70 363 SUPERFAMILY SSF55931 3 268 7.01E-88 T 13-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 COP00_16530 10ac76e83b151f7a555b77a55e49dc70 363 Gene3D G3DSA:3.30.590.10 8 264 1.1E-73 T 13-10-2018 COP00_16530 10ac76e83b151f7a555b77a55e49dc70 363 ProSitePatterns PS00112 Phosphagen kinase active site signature. 167 173 - T 13-10-2018 IPR022415 ATP:guanido phosphotransferase active site GO:0016301|GO:0016772 Reactome: R-HSA-71288 COP00_14885 1ba0d6765bcb1b997c2597f74ccda77c 639 PIRSF PIRSF005091 1 619 3.6E-192 T 13-10-2018 IPR012160 Lipoteichoic acid synthase-like COP00_14885 1ba0d6765bcb1b997c2597f74ccda77c 639 Pfam PF00884 Sulfatase 244 536 2.4E-35 T 13-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 COP00_14885 1ba0d6765bcb1b997c2597f74ccda77c 639 SUPERFAMILY SSF53649 242 633 1.66E-78 T 13-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 COP00_14885 1ba0d6765bcb1b997c2597f74ccda77c 639 Gene3D G3DSA:3.40.720.10 236 546 1.7E-78 T 13-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 COP00_20645 7345b1155ae81a5f63fcdb3f7a32e18a 365 PIRSF PIRSF037219 1 365 2.5E-194 T 13-10-2018 IPR017142 Nitric oxide synthase, oxygenase subunit GO:0004517|GO:0006809|GO:0020037 KEGG: 00220+1.14.14.47|KEGG: 00330+1.14.14.47 COP00_20645 7345b1155ae81a5f63fcdb3f7a32e18a 365 Gene3D G3DSA:3.90.1230.10 194 300 1.8E-154 T 13-10-2018 COP00_20645 7345b1155ae81a5f63fcdb3f7a32e18a 365 SUPERFAMILY SSF56512 3 363 3.53E-171 T 13-10-2018 IPR036119 Nitric oxide synthase, N-terminal domain superfamily GO:0004517|GO:0006809|GO:0055114 Reactome: R-HSA-1222556|Reactome: R-HSA-392154 COP00_20645 7345b1155ae81a5f63fcdb3f7a32e18a 365 Pfam PF02898 Nitric oxide synthase, oxygenase domain 4 362 1.3E-171 T 13-10-2018 IPR004030 Nitric oxide synthase, N-terminal GO:0004517|GO:0006809|GO:0055114 Reactome: R-HSA-1222556|Reactome: R-HSA-392154 COP00_20645 7345b1155ae81a5f63fcdb3f7a32e18a 365 Gene3D G3DSA:3.90.440.10 83 193 1.8E-154 T 13-10-2018 COP00_20645 7345b1155ae81a5f63fcdb3f7a32e18a 365 ProSitePatterns PS60001 Nitric oxide synthase (NOS) signature. 66 73 - T 13-10-2018 IPR004030 Nitric oxide synthase, N-terminal GO:0004517|GO:0006809|GO:0055114 Reactome: R-HSA-1222556|Reactome: R-HSA-392154 COP00_20645 7345b1155ae81a5f63fcdb3f7a32e18a 365 Gene3D G3DSA:3.90.340.10 6 355 1.8E-154 T 13-10-2018 COP00_14475 d3d7174a8d81e78b74ec62bf7ab3db9c 382 Gene3D G3DSA:3.30.390.10 11 374 8.0E-151 T 13-10-2018 IPR029017 Enolase-like, N-terminal COP00_14475 d3d7174a8d81e78b74ec62bf7ab3db9c 382 SUPERFAMILY SSF54826 1 112 2.57E-31 T 13-10-2018 COP00_14475 d3d7174a8d81e78b74ec62bf7ab3db9c 382 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 180 211 - T 13-10-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 COP00_14475 d3d7174a8d81e78b74ec62bf7ab3db9c 382 ProSitePatterns PS00908 Mandelate racemase / muconate lactonizing enzyme family signature 1. 82 107 - T 13-10-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 COP00_14475 d3d7174a8d81e78b74ec62bf7ab3db9c 382 SUPERFAMILY SSF51604 95 360 1.22E-80 T 13-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily COP00_14475 d3d7174a8d81e78b74ec62bf7ab3db9c 382 Gene3D G3DSA:3.20.20.120 102 344 8.0E-151 T 13-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily COP00_14475 d3d7174a8d81e78b74ec62bf7ab3db9c 382 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 16 107 4.9E-26 T 13-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain COP00_14475 d3d7174a8d81e78b74ec62bf7ab3db9c 382 Pfam PF13378 Enolase C-terminal domain-like 131 355 4.9E-64 T 13-10-2018 IPR029065 Enolase C-terminal domain-like COP00_14475 d3d7174a8d81e78b74ec62bf7ab3db9c 382 SMART SM00922 125 230 4.1E-21 T 13-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal COP00_14415 ffd992920eef2efb3c62c03f6a3c32ef 304 SUPERFAMILY SSF46785 1 111 6.82E-25 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_14415 ffd992920eef2efb3c62c03f6a3c32ef 304 Gene3D G3DSA:1.10.10.10 1 92 8.5E-30 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_14415 ffd992920eef2efb3c62c03f6a3c32ef 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.7E-11 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 COP00_14415 ffd992920eef2efb3c62c03f6a3c32ef 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.7E-11 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 COP00_14415 ffd992920eef2efb3c62c03f6a3c32ef 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.7E-11 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 COP00_14415 ffd992920eef2efb3c62c03f6a3c32ef 304 SUPERFAMILY SSF53850 90 292 3.48E-47 T 13-10-2018 COP00_14415 ffd992920eef2efb3c62c03f6a3c32ef 304 Pfam PF03466 LysR substrate binding domain 90 289 6.9E-52 T 13-10-2018 IPR005119 LysR, substrate-binding COP00_14415 ffd992920eef2efb3c62c03f6a3c32ef 304 Gene3D G3DSA:3.40.190.290 93 294 9.9E-61 T 13-10-2018 COP00_14415 ffd992920eef2efb3c62c03f6a3c32ef 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 4.8E-23 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 COP00_16265 9ad1baa7bdc1ed51cdb5c8b2d29cc8ab 97 Pfam PF04026 SpoVG 2 81 3.4E-35 T 13-10-2018 IPR007170 Stage V sporulation protein G GO:0030435 COP00_16265 9ad1baa7bdc1ed51cdb5c8b2d29cc8ab 97 Gene3D G3DSA:3.30.1120.40 1 97 4.0E-40 T 13-10-2018 IPR036751 Stage V sporulation protein G superfamily GO:0030435 COP00_16265 9ad1baa7bdc1ed51cdb5c8b2d29cc8ab 97 Hamap MF_00819 Putative septation protein SpoVG [spoVG]. 1 95 27.798 T 13-10-2018 IPR007170 Stage V sporulation protein G GO:0030435 COP00_16265 9ad1baa7bdc1ed51cdb5c8b2d29cc8ab 97 SUPERFAMILY SSF160537 2 85 5.23E-33 T 13-10-2018 IPR036751 Stage V sporulation protein G superfamily GO:0030435 COP00_05805 2d0e10b81d678a137e500b9b8269225d 424 SUPERFAMILY SSF51735 191 423 8.8E-79 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily COP00_05805 2d0e10b81d678a137e500b9b8269225d 424 Gene3D G3DSA:3.40.50.720 198 351 1.1E-143 T 13-10-2018 COP00_05805 2d0e10b81d678a137e500b9b8269225d 424 SMART SM00839 193 422 1.0E-97 T 13-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 COP00_05805 2d0e10b81d678a137e500b9b8269225d 424 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 110 123 - T 13-10-2018 IPR033524 Leu/Phe/Val dehydrogenases active site Reactome: R-HSA-2151201|Reactome: R-HSA-70614 COP00_05805 2d0e10b81d678a137e500b9b8269225d 424 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 182 204 1.0E-30 T 13-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 COP00_05805 2d0e10b81d678a137e500b9b8269225d 424 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 224 244 1.0E-30 T 13-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 COP00_05805 2d0e10b81d678a137e500b9b8269225d 424 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 102 116 1.0E-30 T 13-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 COP00_05805 2d0e10b81d678a137e500b9b8269225d 424 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 350 361 1.0E-30 T 13-10-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 COP00_05805 2d0e10b81d678a137e500b9b8269225d 424 Gene3D G3DSA:1.10.8.1210 18 352 1.1E-143 T 13-10-2018 COP00_05805 2d0e10b81d678a137e500b9b8269225d 424 Gene3D G3DSA:3.40.50.10860 43 197 1.1E-143 T 13-10-2018 COP00_05805 2d0e10b81d678a137e500b9b8269225d 424 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 191 422 1.1E-80 T 13-10-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 COP00_05805 2d0e10b81d678a137e500b9b8269225d 424 Gene3D G3DSA:1.10.8.1210 377 424 9.6E-17 T 13-10-2018 COP00_05805 2d0e10b81d678a137e500b9b8269225d 424 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 47 173 4.5E-53 T 13-10-2018 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 COP00_05805 2d0e10b81d678a137e500b9b8269225d 424 PIRSF PIRSF000185 10 424 8.2E-174 T 13-10-2018 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 COP00_05805 2d0e10b81d678a137e500b9b8269225d 424 SUPERFAMILY SSF53223 14 193 1.25E-65 T 13-10-2018 COP00_14095 4a9d387930bdf059b17abf8111e8b1c7 74 Hamap MF_01863 UPF0741 protein . 1 74 32.856 T 13-10-2018 IPR020880 Protein of unknown function UPF0741 COP00_14095 4a9d387930bdf059b17abf8111e8b1c7 74 Pfam PF07293 Protein of unknown function (DUF1450) 7 73 7.5E-9 T 13-10-2018 IPR009910 Protein of unknown function DUF1450 COP00_12795 50c72d3929c8b23f867da0d4718d1875 234 Pfam PF00072 Response regulator receiver domain 4 111 1.0E-20 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 COP00_12795 50c72d3929c8b23f867da0d4718d1875 234 Gene3D G3DSA:3.40.50.2300 2 126 5.8E-30 T 13-10-2018 COP00_12795 50c72d3929c8b23f867da0d4718d1875 234 Gene3D G3DSA:1.10.10.10 127 234 1.6E-29 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_12795 50c72d3929c8b23f867da0d4718d1875 234 SUPERFAMILY SSF52172 3 118 5.98E-33 T 13-10-2018 IPR011006 CheY-like superfamily COP00_12795 50c72d3929c8b23f867da0d4718d1875 234 SUPERFAMILY SSF46894 130 229 2.3E-27 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 COP00_12795 50c72d3929c8b23f867da0d4718d1875 234 SMART SM00448 2 112 1.0E-28 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 COP00_12795 50c72d3929c8b23f867da0d4718d1875 234 Pfam PF00486 Transcriptional regulatory protein, C terminal 153 227 6.1E-26 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 COP00_12795 50c72d3929c8b23f867da0d4718d1875 234 SMART SM00862 152 227 9.5E-26 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 COP00_24070 398d34784b926b47c0bb7288eb0060b1 65 Pfam PF00269 Small, acid-soluble spore proteins, alpha/beta type 5 59 6.5E-21 T 13-10-2018 IPR001448 Small acid-soluble spore protein, alpha/beta-type GO:0003690|GO:0006265 COP00_24070 398d34784b926b47c0bb7288eb0060b1 65 ProSitePatterns PS00684 Small, acid-soluble spore proteins, alpha/beta type, signature 2. 38 52 - T 13-10-2018 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site GO:0003690|GO:0006265 COP00_24070 398d34784b926b47c0bb7288eb0060b1 65 Gene3D G3DSA:1.10.8.910 5 65 3.6E-28 T 13-10-2018 IPR038300 SASP, alpha/beta-type superfamily COP00_24070 398d34784b926b47c0bb7288eb0060b1 65 ProSitePatterns PS00304 Small, acid-soluble spore proteins, alpha/beta type, signature 1. 20 29 - T 13-10-2018 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site GO:0003690|GO:0006265 COP00_05650 1dc54ff1a1a0c81710cd9c5759ba28d2 515 Pfam PF00425 chorismate binding enzyme 231 484 1.2E-95 T 13-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal COP00_05650 1dc54ff1a1a0c81710cd9c5759ba28d2 515 TIGRFAM TIGR00564 trpE_most: anthranilate synthase component I 29 492 5.0E-180 T 13-10-2018 IPR005256 Anthranilate synthase component I, PabB-like GO:0000162|GO:0004049 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 COP00_05650 1dc54ff1a1a0c81710cd9c5759ba28d2 515 PRINTS PR00095 Anthranilate synthase component I signature 441 455 6.6E-21 T 13-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 COP00_05650 1dc54ff1a1a0c81710cd9c5759ba28d2 515 PRINTS PR00095 Anthranilate synthase component I signature 332 345 6.6E-21 T 13-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 COP00_05650 1dc54ff1a1a0c81710cd9c5759ba28d2 515 PRINTS PR00095 Anthranilate synthase component I signature 346 359 6.6E-21 T 13-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 COP00_05650 1dc54ff1a1a0c81710cd9c5759ba28d2 515 PRINTS PR00095 Anthranilate synthase component I signature 426 440 6.6E-21 T 13-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 COP00_05650 1dc54ff1a1a0c81710cd9c5759ba28d2 515 Pfam PF04715 Anthranilate synthase component I, N terminal region 29 167 5.3E-27 T 13-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 COP00_05650 1dc54ff1a1a0c81710cd9c5759ba28d2 515 Gene3D G3DSA:3.60.120.10 1 502 2.2E-164 T 13-10-2018 IPR005801 ADC synthase GO:0009058 COP00_05650 1dc54ff1a1a0c81710cd9c5759ba28d2 515 SUPERFAMILY SSF56322 18 496 3.01E-144 T 13-10-2018 IPR005801 ADC synthase GO:0009058 COP00_14555 8ba63c55b21489ce888796c5ef2891ec 391 SUPERFAMILY SSF52266 296 387 6.78E-8 T 13-10-2018 COP00_14555 8ba63c55b21489ce888796c5ef2891ec 391 Pfam PF04914 DltD protein 41 386 5.8E-123 T 13-10-2018 IPR006998 DltD COP00_14555 8ba63c55b21489ce888796c5ef2891ec 391 PIRSF PIRSF021438 1 388 5.0E-159 T 13-10-2018 IPR023896 D-alanyl-lipoteichoic acid biosynthesis DltD, Firmicutes COP00_14555 8ba63c55b21489ce888796c5ef2891ec 391 TIGRFAM TIGR04092 LTA_DltD: D-alanyl-lipoteichoic acid biosynthesis protein DltD 7 385 4.5E-135 T 13-10-2018 IPR023896 D-alanyl-lipoteichoic acid biosynthesis DltD, Firmicutes COP00_16035 6dfc2d1696c6e4aed498fb4b1bee424c 380 Pfam PF13556 PucR C-terminal helix-turn-helix domain 307 364 3.0E-20 T 13-10-2018 IPR025736 PucR C-terminal helix-turn-helix domain COP00_16035 6dfc2d1696c6e4aed498fb4b1bee424c 380 Pfam PF05651 Putative sugar diacid recognition 4 136 1.2E-50 T 13-10-2018 IPR008599 Putative sugar diacid recognition COP00_16035 6dfc2d1696c6e4aed498fb4b1bee424c 380 Gene3D G3DSA:1.10.10.2840 241 368 5.9E-22 T 13-10-2018 COP00_21785 21d55f2a859c30df6ca6a81dc36a33cf 152 Pfam PF01047 MarR family 40 97 5.5E-15 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 COP00_21785 21d55f2a859c30df6ca6a81dc36a33cf 152 Gene3D G3DSA:1.10.10.10 2 151 8.7E-32 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_21785 21d55f2a859c30df6ca6a81dc36a33cf 152 SMART SM00347 33 133 7.3E-25 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 COP00_21785 21d55f2a859c30df6ca6a81dc36a33cf 152 SUPERFAMILY SSF46785 9 148 2.31E-28 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_21785 21d55f2a859c30df6ca6a81dc36a33cf 152 PRINTS PR00598 Bacterial regulatory protein MarR family signature 74 89 1.4E-5 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 COP00_21785 21d55f2a859c30df6ca6a81dc36a33cf 152 PRINTS PR00598 Bacterial regulatory protein MarR family signature 93 109 1.4E-5 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 COP00_21785 21d55f2a859c30df6ca6a81dc36a33cf 152 PRINTS PR00598 Bacterial regulatory protein MarR family signature 57 73 1.4E-5 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 COP00_13335 3c4a25ea457f5497b60f6051ad2e60ad 340 SUPERFAMILY SSF47413 8 67 4.69E-14 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 COP00_13335 3c4a25ea457f5497b60f6051ad2e60ad 340 Pfam PF13377 Periplasmic binding protein-like domain 178 339 1.6E-21 T 13-10-2018 COP00_13335 3c4a25ea457f5497b60f6051ad2e60ad 340 SUPERFAMILY SSF53822 66 334 4.32E-58 T 13-10-2018 IPR028082 Periplasmic binding protein-like I COP00_13335 3c4a25ea457f5497b60f6051ad2e60ad 340 ProSitePatterns PS00356 LacI-type HTH domain signature. 11 29 - T 13-10-2018 COP00_13335 3c4a25ea457f5497b60f6051ad2e60ad 340 Gene3D G3DSA:3.40.50.2300 71 322 3.5E-64 T 13-10-2018 COP00_13335 3c4a25ea457f5497b60f6051ad2e60ad 340 SMART SM00354 8 79 5.5E-31 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 COP00_13335 3c4a25ea457f5497b60f6051ad2e60ad 340 Gene3D G3DSA:1.10.260.40 7 68 1.6E-18 T 13-10-2018 COP00_13335 3c4a25ea457f5497b60f6051ad2e60ad 340 Gene3D G3DSA:3.40.50.2300 166 301 3.5E-64 T 13-10-2018 COP00_13335 3c4a25ea457f5497b60f6051ad2e60ad 340 Pfam PF00356 Bacterial regulatory proteins, lacI family 10 56 9.1E-15 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 COP00_18130 ccb94857677632d47d3e73efe1458b9d 414 Gene3D G3DSA:1.10.10.2840 280 410 3.2E-16 T 13-10-2018 COP00_18130 ccb94857677632d47d3e73efe1458b9d 414 Pfam PF13556 PucR C-terminal helix-turn-helix domain 349 404 1.3E-17 T 13-10-2018 IPR025736 PucR C-terminal helix-turn-helix domain COP00_18725 553df26b0f81abe3c83972d76fd03cbb 251 Gene3D G3DSA:3.30.1240.10 132 175 2.4E-37 T 13-10-2018 COP00_18725 553df26b0f81abe3c83972d76fd03cbb 251 Pfam PF08282 haloacid dehalogenase-like hydrolase 14 123 3.3E-25 T 13-10-2018 COP00_18725 553df26b0f81abe3c83972d76fd03cbb 251 Pfam PF08282 haloacid dehalogenase-like hydrolase 135 245 3.4E-32 T 13-10-2018 COP00_18725 553df26b0f81abe3c83972d76fd03cbb 251 Gene3D G3DSA:3.30.1240.10 91 110 2.9E-25 T 13-10-2018 COP00_18725 553df26b0f81abe3c83972d76fd03cbb 251 Gene3D G3DSA:3.40.50.1000 176 245 2.4E-37 T 13-10-2018 IPR023214 HAD superfamily COP00_18725 553df26b0f81abe3c83972d76fd03cbb 251 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 13 218 1.2E-29 T 13-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 COP00_18725 553df26b0f81abe3c83972d76fd03cbb 251 ProSitePatterns PS01229 Hypothetical cof family signature 2. 199 221 - T 13-10-2018 COP00_18725 553df26b0f81abe3c83972d76fd03cbb 251 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 15 29 5.3E-6 T 13-10-2018 COP00_18725 553df26b0f81abe3c83972d76fd03cbb 251 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 222 234 5.3E-6 T 13-10-2018 COP00_18725 553df26b0f81abe3c83972d76fd03cbb 251 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 199 218 5.3E-6 T 13-10-2018 COP00_18725 553df26b0f81abe3c83972d76fd03cbb 251 Gene3D G3DSA:3.40.50.1000 13 90 2.9E-25 T 13-10-2018 IPR023214 HAD superfamily COP00_18725 553df26b0f81abe3c83972d76fd03cbb 251 ProSitePatterns PS01228 Hypothetical cof family signature 1. 13 24 - T 13-10-2018 COP00_18725 553df26b0f81abe3c83972d76fd03cbb 251 SUPERFAMILY SSF56784 10 250 2.0E-67 T 13-10-2018 IPR036412 HAD-like superfamily COP00_21060 4f891044c2b2551503d037ceff0aabfb 422 Gene3D G3DSA:1.20.1250.20 8 402 6.3E-42 T 13-10-2018 COP00_21060 4f891044c2b2551503d037ceff0aabfb 422 Pfam PF07690 Major Facilitator Superfamily 18 367 5.2E-34 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 COP00_21060 4f891044c2b2551503d037ceff0aabfb 422 SUPERFAMILY SSF103473 1 402 3.79E-47 T 13-10-2018 IPR036259 MFS transporter superfamily COP00_04895 9cddabfad9416f55e37d10fbc98e0a23 464 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 55 74 2.5E-13 T 13-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 COP00_04895 9cddabfad9416f55e37d10fbc98e0a23 464 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 26 47 2.5E-13 T 13-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 COP00_04895 9cddabfad9416f55e37d10fbc98e0a23 464 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 101 127 2.5E-13 T 13-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 COP00_04895 9cddabfad9416f55e37d10fbc98e0a23 464 ProSitePatterns PS00610 Sodium:neurotransmitter symporter family signature 1. 42 56 - T 13-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 COP00_04895 9cddabfad9416f55e37d10fbc98e0a23 464 SUPERFAMILY SSF161070 19 456 5.49E-129 T 13-10-2018 IPR037272 Sodium:neurotransmitter symporter superfamily GO:0005328 COP00_04895 9cddabfad9416f55e37d10fbc98e0a23 464 Pfam PF00209 Sodium:neurotransmitter symporter family 19 137 1.3E-26 T 13-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 COP00_04895 9cddabfad9416f55e37d10fbc98e0a23 464 Pfam PF00209 Sodium:neurotransmitter symporter family 161 461 1.4E-29 T 13-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 COP00_23290 49ae1245afaf0968e9cce2c0fb2da346 142 SMART SM00530 6 59 6.9E-11 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 COP00_23290 49ae1245afaf0968e9cce2c0fb2da346 142 Pfam PF01381 Helix-turn-helix 7 59 7.6E-8 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 COP00_23290 49ae1245afaf0968e9cce2c0fb2da346 142 SUPERFAMILY SSF47413 1 65 2.56E-10 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 COP00_23290 49ae1245afaf0968e9cce2c0fb2da346 142 Gene3D G3DSA:1.10.260.40 3 101 1.1E-16 T 13-10-2018 COP00_05015 0cd8d9b7f7848d426032fd84dc60046e 235 Pfam PF08241 Methyltransferase domain 40 134 1.8E-18 T 13-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 COP00_05015 0cd8d9b7f7848d426032fd84dc60046e 235 Gene3D G3DSA:3.40.50.150 6 235 1.1E-35 T 13-10-2018 COP00_05015 0cd8d9b7f7848d426032fd84dc60046e 235 SUPERFAMILY SSF53335 13 182 1.86E-32 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase COP00_19975 690a4de5bc74cc4299c7ab022237dd8a 349 Pfam PF00296 Luciferase-like monooxygenase 1 302 3.8E-52 T 13-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 COP00_19975 690a4de5bc74cc4299c7ab022237dd8a 349 Gene3D G3DSA:3.20.20.30 1 347 5.0E-94 T 13-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 COP00_19975 690a4de5bc74cc4299c7ab022237dd8a 349 SUPERFAMILY SSF51679 1 340 6.8E-84 T 13-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 COP00_19975 690a4de5bc74cc4299c7ab022237dd8a 349 TIGRFAM TIGR03858 LLM_2I7G: probable oxidoreductase, LLM family 2 339 1.0E-163 T 13-10-2018 IPR022290 Conserved hypothetical protein CHP03858, luciferase-like monooxygenase, putative COP00_15705 f34dbae4a459111595eff388915bf505 264 Pfam PF00753 Metallo-beta-lactamase superfamily 12 218 5.8E-26 T 13-10-2018 IPR001279 Metallo-beta-lactamase COP00_15705 f34dbae4a459111595eff388915bf505 264 Gene3D G3DSA:3.60.15.10 8 248 9.7E-41 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like COP00_15705 f34dbae4a459111595eff388915bf505 264 SUPERFAMILY SSF56281 1 249 8.78E-44 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like COP00_15705 f34dbae4a459111595eff388915bf505 264 SMART SM00849 13 218 6.6E-17 T 13-10-2018 IPR001279 Metallo-beta-lactamase COP00_10395 205ea26908e24e06f8134a54d0a16029 533 Gene3D G3DSA:3.30.565.10 383 532 8.8E-31 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily COP00_10395 205ea26908e24e06f8134a54d0a16029 533 Pfam PF17203 Single cache domain 3 35 168 4.5E-23 T 13-10-2018 IPR033463 Single cache domain 3 COP00_10395 205ea26908e24e06f8134a54d0a16029 533 SUPERFAMILY SSF55874 393 526 3.3E-29 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily COP00_10395 205ea26908e24e06f8134a54d0a16029 533 Pfam PF00989 PAS fold 212 312 9.7E-8 T 13-10-2018 IPR013767 PAS fold GO:0006355 COP00_10395 205ea26908e24e06f8134a54d0a16029 533 Gene3D G3DSA:3.30.450.20 198 313 3.6E-22 T 13-10-2018 COP00_10395 205ea26908e24e06f8134a54d0a16029 533 PRINTS PR00344 Bacterial sensor protein C-terminal signature 487 505 1.0E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 COP00_10395 205ea26908e24e06f8134a54d0a16029 533 PRINTS PR00344 Bacterial sensor protein C-terminal signature 511 524 1.0E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 COP00_10395 205ea26908e24e06f8134a54d0a16029 533 PRINTS PR00344 Bacterial sensor protein C-terminal signature 476 486 1.0E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 COP00_10395 205ea26908e24e06f8134a54d0a16029 533 PRINTS PR00344 Bacterial sensor protein C-terminal signature 458 472 1.0E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 COP00_10395 205ea26908e24e06f8134a54d0a16029 533 SMART SM00091 211 279 0.0014 T 13-10-2018 IPR000014 PAS domain COP00_10395 205ea26908e24e06f8134a54d0a16029 533 SMART SM00387 419 527 2.9E-23 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase COP00_10395 205ea26908e24e06f8134a54d0a16029 533 Gene3D G3DSA:1.10.287.130 314 379 3.9E-7 T 13-10-2018 COP00_10395 205ea26908e24e06f8134a54d0a16029 533 SUPERFAMILY SSF103190 37 168 2.47E-37 T 13-10-2018 IPR029151 Periplasmic sensor-like domain superfamily COP00_10395 205ea26908e24e06f8134a54d0a16029 533 SUPERFAMILY SSF55785 212 311 2.09E-6 T 13-10-2018 IPR035965 PAS domain superfamily COP00_10395 205ea26908e24e06f8134a54d0a16029 533 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 423 526 3.1E-20 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase COP00_10395 205ea26908e24e06f8134a54d0a16029 533 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 322 378 9.3E-13 T 13-10-2018 IPR039506 SpoOB, alpha-helical domain COP00_10395 205ea26908e24e06f8134a54d0a16029 533 Gene3D G3DSA:3.30.450.20 31 169 4.5E-42 T 13-10-2018 COP00_01735 c35431efc1d2300739fbeb05672e59c3 519 SUPERFAMILY SSF54791 207 303 7.03E-16 T 13-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 COP00_01735 c35431efc1d2300739fbeb05672e59c3 519 Pfam PF12072 Domain of unknown function (DUF3552) 5 204 3.3E-76 T 13-10-2018 IPR022711 Ribonuclease Y, N-terminal COP00_01735 c35431efc1d2300739fbeb05672e59c3 519 SMART SM00322 207 274 1.1E-6 T 13-10-2018 IPR004087 K Homology domain GO:0003676 COP00_01735 c35431efc1d2300739fbeb05672e59c3 519 SUPERFAMILY SSF109604 315 466 4.94E-31 T 13-10-2018 COP00_01735 c35431efc1d2300739fbeb05672e59c3 519 Hamap MF_00335 Ribonuclease Y [rny]. 4 519 25.846 T 13-10-2018 IPR017705 Ribonuclease Y GO:0003723|GO:0006402|GO:0016020 COP00_01735 c35431efc1d2300739fbeb05672e59c3 519 Gene3D G3DSA:1.10.3210.10 317 472 1.4E-18 T 13-10-2018 COP00_01735 c35431efc1d2300739fbeb05672e59c3 519 TIGRFAM TIGR03319 RNase_Y: ribonuclease Y 7 519 3.3E-247 T 13-10-2018 IPR017705 Ribonuclease Y GO:0003723|GO:0006402|GO:0016020 COP00_01735 c35431efc1d2300739fbeb05672e59c3 519 Gene3D G3DSA:3.30.1370.10 207 304 1.2E-8 T 13-10-2018 IPR036612 K Homology domain, type 1 superfamily GO:0003723 COP00_01735 c35431efc1d2300739fbeb05672e59c3 519 SMART SM00471 331 437 3.5E-13 T 13-10-2018 IPR003607 HD/PDEase domain COP00_01735 c35431efc1d2300739fbeb05672e59c3 519 Pfam PF01966 HD domain 336 427 1.7E-18 T 13-10-2018 IPR006674 HD domain COP00_01735 c35431efc1d2300739fbeb05672e59c3 519 TIGRFAM TIGR00277 HDIG: HDIG domain 331 408 4.4E-26 T 13-10-2018 IPR006675 HDIG domain COP00_01735 c35431efc1d2300739fbeb05672e59c3 519 Pfam PF00013 KH domain 212 266 3.4E-6 T 13-10-2018 IPR004088 K Homology domain, type 1 GO:0003723 COP00_09195 0786bd80a881d7eb98959ec0057c0d43 403 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 10 18 - T 13-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 COP00_09195 0786bd80a881d7eb98959ec0057c0d43 403 Gene3D G3DSA:3.40.50.620 1 174 8.3E-68 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold COP00_09195 0786bd80a881d7eb98959ec0057c0d43 403 Pfam PF00764 Arginosuccinate synthase 8 392 1.0E-184 T 13-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 COP00_09195 0786bd80a881d7eb98959ec0057c0d43 403 SUPERFAMILY SSF69864 171 398 9.03E-95 T 13-10-2018 COP00_09195 0786bd80a881d7eb98959ec0057c0d43 403 TIGRFAM TIGR00032 argG: argininosuccinate synthase 6 396 1.4E-180 T 13-10-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 COP00_09195 0786bd80a881d7eb98959ec0057c0d43 403 SUPERFAMILY SSF52402 2 171 1.48E-48 T 13-10-2018 COP00_09195 0786bd80a881d7eb98959ec0057c0d43 403 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 117 128 - T 13-10-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 COP00_09195 0786bd80a881d7eb98959ec0057c0d43 403 Gene3D G3DSA:3.90.1260.10 175 402 3.2E-93 T 13-10-2018 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 COP00_09195 0786bd80a881d7eb98959ec0057c0d43 403 Hamap MF_00005 Argininosuccinate synthase [argG]. 4 397 55.077 T 13-10-2018 IPR023434 Argininosuccinate synthase, type 1 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 COP00_22325 dd97fe286de76cdf177a559c20af8516 430 SUPERFAMILY SSF58104 198 429 3.79E-50 T 13-10-2018 COP00_22325 dd97fe286de76cdf177a559c20af8516 430 Pfam PF11563 Protoglobin 30 182 9.3E-40 T 13-10-2018 COP00_22325 dd97fe286de76cdf177a559c20af8516 430 SMART SM00283 192 425 2.1E-19 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 COP00_22325 dd97fe286de76cdf177a559c20af8516 430 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 254 419 8.9E-32 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 COP00_22325 dd97fe286de76cdf177a559c20af8516 430 Gene3D G3DSA:1.10.490.10 27 176 3.4E-38 T 13-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 COP00_22325 dd97fe286de76cdf177a559c20af8516 430 SUPERFAMILY SSF46458 21 175 7.77E-38 T 13-10-2018 IPR009050 Globin-like superfamily COP00_22325 dd97fe286de76cdf177a559c20af8516 430 Gene3D G3DSA:1.10.287.950 213 430 2.5E-41 T 13-10-2018 COP00_22080 d478687b7cfd1b2e6ab06e136cd933a4 298 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 COP00_22080 d478687b7cfd1b2e6ab06e136cd933a4 298 SUPERFAMILY SSF52540 2 224 5.44E-57 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_22080 d478687b7cfd1b2e6ab06e136cd933a4 298 Pfam PF13732 Domain of unknown function (DUF4162) 211 293 5.4E-20 T 13-10-2018 IPR025302 Domain of unknown function DUF4162 COP00_22080 d478687b7cfd1b2e6ab06e136cd933a4 298 Gene3D G3DSA:3.40.50.300 1 232 4.8E-59 T 13-10-2018 COP00_22080 d478687b7cfd1b2e6ab06e136cd933a4 298 SMART SM00382 26 205 7.8E-8 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_22080 d478687b7cfd1b2e6ab06e136cd933a4 298 Pfam PF00005 ABC transporter 18 157 1.9E-28 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 COP00_19260 eee57c1e70e59084a46850bc94632ae6 400 TIGRFAM TIGR00880 2_A_01_02: multidrug resistance protein 48 186 6.6E-41 T 13-10-2018 IPR004734 Multidrug resistance protein GO:0015238|GO:0015893|GO:0016021 Reactome: R-HSA-442660 COP00_19260 eee57c1e70e59084a46850bc94632ae6 400 PRINTS PR01035 Tetracycline resistance protein signature 136 158 4.7E-19 T 13-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 COP00_19260 eee57c1e70e59084a46850bc94632ae6 400 PRINTS PR01035 Tetracycline resistance protein signature 164 184 4.7E-19 T 13-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 COP00_19260 eee57c1e70e59084a46850bc94632ae6 400 PRINTS PR01035 Tetracycline resistance protein signature 21 37 4.7E-19 T 13-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 COP00_19260 eee57c1e70e59084a46850bc94632ae6 400 PRINTS PR01035 Tetracycline resistance protein signature 341 364 4.7E-19 T 13-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 COP00_19260 eee57c1e70e59084a46850bc94632ae6 400 SUPERFAMILY SSF103473 1 392 1.31E-78 T 13-10-2018 IPR036259 MFS transporter superfamily COP00_19260 eee57c1e70e59084a46850bc94632ae6 400 Pfam PF07690 Major Facilitator Superfamily 15 357 1.9E-58 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 COP00_19260 eee57c1e70e59084a46850bc94632ae6 400 Gene3D G3DSA:1.20.1250.20 3 393 6.0E-77 T 13-10-2018 COP00_19260 eee57c1e70e59084a46850bc94632ae6 400 ProSitePatterns PS00216 Sugar transport proteins signature 1. 65 81 - T 13-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 COP00_16765 98b565c73592924485b50dfd9b867e0e 166 ProSitePatterns PS00585 Ribosomal protein S5 signature. 28 60 - T 13-10-2018 IPR018192 Ribosomal protein S5, N-terminal, conserved site COP00_16765 98b565c73592924485b50dfd9b867e0e 166 SUPERFAMILY SSF54768 9 76 5.55E-25 T 13-10-2018 COP00_16765 98b565c73592924485b50dfd9b867e0e 166 Gene3D G3DSA:3.30.160.20 1 73 2.8E-35 T 13-10-2018 COP00_16765 98b565c73592924485b50dfd9b867e0e 166 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 163 37.195 T 13-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 COP00_16765 98b565c73592924485b50dfd9b867e0e 166 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 9 163 2.0E-73 T 13-10-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 COP00_16765 98b565c73592924485b50dfd9b867e0e 166 SUPERFAMILY SSF54211 80 159 8.09E-26 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold COP00_16765 98b565c73592924485b50dfd9b867e0e 166 Pfam PF00333 Ribosomal protein S5, N-terminal domain 11 75 2.0E-32 T 13-10-2018 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 COP00_16765 98b565c73592924485b50dfd9b867e0e 166 Gene3D G3DSA:3.30.230.10 74 166 4.1E-37 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup COP00_16765 98b565c73592924485b50dfd9b867e0e 166 Pfam PF03719 Ribosomal protein S5, C-terminal domain 87 157 3.2E-30 T 13-10-2018 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 COP00_00530 202f9cd5c449f64f00c5fb6c2d6af6d7 257 Gene3D G3DSA:3.40.50.1000 4 247 1.0E-80 T 13-10-2018 IPR023214 HAD superfamily COP00_00530 202f9cd5c449f64f00c5fb6c2d6af6d7 257 ProSitePatterns PS01229 Hypothetical cof family signature 2. 204 226 - T 13-10-2018 COP00_00530 202f9cd5c449f64f00c5fb6c2d6af6d7 257 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 249 5.7E-58 T 13-10-2018 COP00_00530 202f9cd5c449f64f00c5fb6c2d6af6d7 257 Gene3D G3DSA:3.30.1240.10 81 179 1.0E-80 T 13-10-2018 COP00_00530 202f9cd5c449f64f00c5fb6c2d6af6d7 257 SUPERFAMILY SSF56784 1 254 9.71E-68 T 13-10-2018 IPR036412 HAD-like superfamily COP00_00530 202f9cd5c449f64f00c5fb6c2d6af6d7 257 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 249 1.7E-60 T 13-10-2018 IPR000150 Cof family GO:0016787 COP00_00530 202f9cd5c449f64f00c5fb6c2d6af6d7 257 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 223 8.5E-25 T 13-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 COP00_08455 160065e2b54ac654ad24804f7d96849d 268 TIGRFAM TIGR01968 minD_bact: septum site-determining protein MinD 3 264 5.8E-126 T 13-10-2018 IPR010223 ATP binding protein MinD, bacterial-type GO:0016887 COP00_08455 160065e2b54ac654ad24804f7d96849d 268 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 5 220 9.8E-26 T 13-10-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain COP00_08455 160065e2b54ac654ad24804f7d96849d 268 Gene3D G3DSA:3.40.50.300 3 256 9.3E-69 T 13-10-2018 COP00_08455 160065e2b54ac654ad24804f7d96849d 268 SUPERFAMILY SSF52540 5 264 8.07E-58 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_08455 160065e2b54ac654ad24804f7d96849d 268 PIRSF PIRSF003092 1 268 1.9E-96 T 13-10-2018 IPR025501 ATP binding protein MinD COP00_20750 e800b570b1c9b876c7be626f2a720deb 554 Pfam PF00534 Glycosyl transferases group 1 360 529 3.3E-23 T 13-10-2018 IPR001296 Glycosyl transferase, family 1 COP00_20750 e800b570b1c9b876c7be626f2a720deb 554 Gene3D G3DSA:3.40.50.2000 208 544 2.8E-36 T 13-10-2018 COP00_20750 e800b570b1c9b876c7be626f2a720deb 554 SUPERFAMILY SSF53756 202 551 9.87E-41 T 13-10-2018 COP00_20750 e800b570b1c9b876c7be626f2a720deb 554 Pfam PF13385 Concanavalin A-like lectin/glucanases superfamily 5 143 6.5E-13 T 13-10-2018 COP00_20750 e800b570b1c9b876c7be626f2a720deb 554 Gene3D G3DSA:3.40.50.2000 350 535 2.8E-36 T 13-10-2018 COP00_20750 e800b570b1c9b876c7be626f2a720deb 554 SUPERFAMILY SSF49899 6 175 1.74E-19 T 13-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily COP00_20750 e800b570b1c9b876c7be626f2a720deb 554 SMART SM00560 6 141 4.3E-4 T 13-10-2018 IPR006558 LamG-like jellyroll fold COP00_20750 e800b570b1c9b876c7be626f2a720deb 554 Gene3D G3DSA:2.60.120.200 2 192 2.4E-26 T 13-10-2018 COP00_01130 ac21aecb96b82db39141ff697d5a8ac0 362 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 13 362 1.5E-170 T 13-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 COP00_01130 ac21aecb96b82db39141ff697d5a8ac0 362 Gene3D G3DSA:3.20.20.70 80 343 5.8E-101 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 COP00_01130 ac21aecb96b82db39141ff697d5a8ac0 362 Pfam PF13394 4Fe-4S single cluster domain 124 223 1.9E-6 T 13-10-2018 COP00_01130 ac21aecb96b82db39141ff697d5a8ac0 362 PIRSF PIRSF006004 8 362 6.7E-141 T 13-10-2018 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 COP00_01130 ac21aecb96b82db39141ff697d5a8ac0 362 Pfam PF04055 Radical SAM superfamily 119 289 3.3E-17 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 COP00_01130 ac21aecb96b82db39141ff697d5a8ac0 362 Gene3D G3DSA:1.10.150.530 16 76 9.1E-23 T 13-10-2018 COP00_01130 ac21aecb96b82db39141ff697d5a8ac0 362 SUPERFAMILY SSF102114 111 317 1.2E-12 T 13-10-2018 COP00_01130 ac21aecb96b82db39141ff697d5a8ac0 362 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 16 358 74.218 T 13-10-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 COP00_01110 12d12fe426db2793e4cb9e08f6b381f8 805 Gene3D G3DSA:3.40.50.300 254 449 3.3E-77 T 13-10-2018 COP00_01110 12d12fe426db2793e4cb9e08f6b381f8 805 SUPERFAMILY SSF52540 242 448 2.13E-41 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_01110 12d12fe426db2793e4cb9e08f6b381f8 805 SMART SM00487 264 455 6.5E-23 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain COP00_01110 12d12fe426db2793e4cb9e08f6b381f8 805 TIGRFAM TIGR00595 priA: primosomal protein N' 292 802 4.9E-228 T 13-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 COP00_01110 12d12fe426db2793e4cb9e08f6b381f8 805 Gene3D G3DSA:1.10.8.630 3 115 8.0E-26 T 13-10-2018 COP00_01110 12d12fe426db2793e4cb9e08f6b381f8 805 Pfam PF04851 Type III restriction enzyme, res subunit 267 431 1.7E-17 T 13-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 COP00_01110 12d12fe426db2793e4cb9e08f6b381f8 805 SUPERFAMILY SSF52540 534 708 2.04E-33 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_01110 12d12fe426db2793e4cb9e08f6b381f8 805 SMART SM00490 566 663 3.4E-8 T 13-10-2018 IPR001650 Helicase, C-terminal COP00_01110 12d12fe426db2793e4cb9e08f6b381f8 805 Hamap MF_00983 Probable primosomal protein N' [priA]. 9 804 25.778 T 13-10-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 COP00_01110 12d12fe426db2793e4cb9e08f6b381f8 805 Pfam PF00271 Helicase conserved C-terminal domain 561 662 1.2E-7 T 13-10-2018 IPR001650 Helicase, C-terminal COP00_19325 3d09ab17718a50db5b022dd671692c84 212 Gene3D G3DSA:3.40.109.10 3 212 3.8E-63 T 13-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 COP00_19325 3d09ab17718a50db5b022dd671692c84 212 Pfam PF00881 Nitroreductase family 14 192 1.1E-32 T 13-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 COP00_19325 3d09ab17718a50db5b022dd671692c84 212 SUPERFAMILY SSF55469 9 210 3.14E-60 T 13-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 COP00_04430 770ea95c93a8ecf4bcc495beffb58a21 521 Pfam PF03323 Bacillus/Clostridium GerA spore germination protein 42 510 5.5E-183 T 13-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 COP00_04430 770ea95c93a8ecf4bcc495beffb58a21 521 PIRSF PIRSF005690 28 521 9.1E-187 T 13-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 COP00_07415 06ad5a2365c35c7b72cc29c3d247816c 277 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 117 191 3.7E-11 T 13-10-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase COP00_07415 06ad5a2365c35c7b72cc29c3d247816c 277 SUPERFAMILY SSF53223 3 101 7.48E-35 T 13-10-2018 COP00_07415 06ad5a2365c35c7b72cc29c3d247816c 277 SUPERFAMILY SSF51735 102 271 1.24E-40 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily COP00_07415 06ad5a2365c35c7b72cc29c3d247816c 277 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 2 270 35.556 T 13-10-2018 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 COP00_07415 06ad5a2365c35c7b72cc29c3d247816c 277 Gene3D G3DSA:3.40.50.10860 5 259 2.4E-96 T 13-10-2018 COP00_07415 06ad5a2365c35c7b72cc29c3d247816c 277 Gene3D G3DSA:3.40.50.720 101 238 2.4E-96 T 13-10-2018 COP00_07415 06ad5a2365c35c7b72cc29c3d247816c 277 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 4 272 5.2E-101 T 13-10-2018 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 COP00_07415 06ad5a2365c35c7b72cc29c3d247816c 277 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 7 89 5.4E-31 T 13-10-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 COP00_03935 cca3dc2c5aea313a7c2814b4bec13661 462 SUPERFAMILY SSF46785 21 95 8.97E-19 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_03935 cca3dc2c5aea313a7c2814b4bec13661 462 SUPERFAMILY SSF53383 83 461 1.73E-56 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase COP00_03935 cca3dc2c5aea313a7c2814b4bec13661 462 Gene3D G3DSA:3.90.1150.10 120 458 3.1E-51 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 COP00_03935 cca3dc2c5aea313a7c2814b4bec13661 462 Pfam PF00155 Aminotransferase class I and II 118 445 2.1E-17 T 13-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 COP00_03935 cca3dc2c5aea313a7c2814b4bec13661 462 Gene3D G3DSA:1.10.10.10 13 88 8.6E-18 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_03935 cca3dc2c5aea313a7c2814b4bec13661 462 Gene3D G3DSA:3.40.640.10 139 358 3.1E-51 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 COP00_03935 cca3dc2c5aea313a7c2814b4bec13661 462 Pfam PF00392 Bacterial regulatory proteins, gntR family 26 87 9.7E-14 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 COP00_03935 cca3dc2c5aea313a7c2814b4bec13661 462 SMART SM00345 28 87 1.8E-16 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 COP00_08010 7a824fb1ffea44f61ab7c0a9c17b7d7a 190 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 10 23 6.6E-10 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 COP00_08010 7a824fb1ffea44f61ab7c0a9c17b7d7a 190 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 31 54 6.6E-10 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 COP00_08010 7a824fb1ffea44f61ab7c0a9c17b7d7a 190 SUPERFAMILY SSF48498 78 186 9.78E-7 T 13-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily COP00_08010 7a824fb1ffea44f61ab7c0a9c17b7d7a 190 Pfam PF16295 Tetracycline repressor, C-terminal all-alpha domain 57 187 1.8E-43 T 13-10-2018 IPR032551 HTH-type transcriptional repressor, C-terminal COP00_08010 7a824fb1ffea44f61ab7c0a9c17b7d7a 190 SUPERFAMILY SSF46689 4 70 2.05E-16 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 COP00_08010 7a824fb1ffea44f61ab7c0a9c17b7d7a 190 Gene3D G3DSA:1.10.357.10 2 188 3.8E-50 T 13-10-2018 COP00_08010 7a824fb1ffea44f61ab7c0a9c17b7d7a 190 ProSitePatterns PS01081 TetR-type HTH domain signature. 22 53 - T 13-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site COP00_08010 7a824fb1ffea44f61ab7c0a9c17b7d7a 190 Pfam PF00440 Bacterial regulatory proteins, tetR family 10 54 5.2E-18 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 COP00_13100 44ddfe5d3d5a4386f5ef573b6e71b1c9 158 Pfam PF05130 FlgN protein 2 140 5.6E-25 T 13-10-2018 IPR007809 FlgN-like protein GO:0005515|GO:0044780 COP00_13100 44ddfe5d3d5a4386f5ef573b6e71b1c9 158 SUPERFAMILY SSF140566 2 127 3.66E-17 T 13-10-2018 IPR036679 FlgN-like superfamily GO:0005515|GO:0044780 COP00_13100 44ddfe5d3d5a4386f5ef573b6e71b1c9 158 Gene3D G3DSA:1.20.58.300 1 127 8.3E-8 T 13-10-2018 COP00_20320 488fd1331b33c1bc5a11cb0c50533c5b 476 SMART SM00845 326 473 1.3E-79 T 13-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 COP00_20320 488fd1331b33c1bc5a11cb0c50533c5b 476 Hamap MF_00121 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B [gatB]. 2 474 39.353 T 13-10-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 COP00_20320 488fd1331b33c1bc5a11cb0c50533c5b 476 TIGRFAM TIGR00133 gatB: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit 1 473 4.5E-183 T 13-10-2018 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit GO:0016884 COP00_20320 488fd1331b33c1bc5a11cb0c50533c5b 476 SUPERFAMILY SSF55931 4 294 3.47E-122 T 13-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 COP00_20320 488fd1331b33c1bc5a11cb0c50533c5b 476 Gene3D G3DSA:1.10.10.410 413 476 6.5E-26 T 13-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal COP00_20320 488fd1331b33c1bc5a11cb0c50533c5b 476 ProSitePatterns PS01234 Glutamyl-tRNA(Gln) amidotransferase subunit B signature. 142 156 - T 13-10-2018 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site GO:0016884 COP00_20320 488fd1331b33c1bc5a11cb0c50533c5b 476 SUPERFAMILY SSF89095 295 400 2.53E-37 T 13-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 COP00_20320 488fd1331b33c1bc5a11cb0c50533c5b 476 Pfam PF02637 GatB domain 326 473 5.2E-57 T 13-10-2018 IPR018027 Asn/Gln amidotransferase GO:0016884 COP00_20320 488fd1331b33c1bc5a11cb0c50533c5b 476 Pfam PF02934 GatB/GatE catalytic domain 5 285 7.4E-113 T 13-10-2018 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic GO:0016874 COP00_20320 488fd1331b33c1bc5a11cb0c50533c5b 476 Gene3D G3DSA:1.10.150.380 298 411 1.3E-39 T 13-10-2018 COP00_00780 e89baaefdbca0de0b488ae08c0832db7 171 Pfam PF02620 Uncharacterized ACR, COG1399 55 164 9.6E-24 T 13-10-2018 IPR003772 Large ribosomal RNA subunit accumulation protein YceD COP00_22010 df164d9b2b9f41e2999e55bf64efe503 69 Pfam PF17277 Family of unknown function (DUF5342) 1 69 5.2E-34 T 13-10-2018 IPR017263 Uncharacterised conserved protein UCP037692 COP00_22010 df164d9b2b9f41e2999e55bf64efe503 69 ProDom PD056348 YHEE BH1143 1 69 4.0E-32 T 13-10-2018 IPR017263 Uncharacterised conserved protein UCP037692 COP00_22010 df164d9b2b9f41e2999e55bf64efe503 69 PIRSF PIRSF037692 1 69 2.1E-38 T 13-10-2018 IPR017263 Uncharacterised conserved protein UCP037692 COP00_19480 2adadf42fc0089438b8050375d261e70 341 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 103 122 1.6E-51 T 13-10-2018 IPR017861 Kae1/TsaD family COP00_19480 2adadf42fc0089438b8050375d261e70 341 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 269 278 1.6E-51 T 13-10-2018 IPR017861 Kae1/TsaD family COP00_19480 2adadf42fc0089438b8050375d261e70 341 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 136 148 1.6E-51 T 13-10-2018 IPR017861 Kae1/TsaD family COP00_19480 2adadf42fc0089438b8050375d261e70 341 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 82 102 1.6E-51 T 13-10-2018 IPR017861 Kae1/TsaD family COP00_19480 2adadf42fc0089438b8050375d261e70 341 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 159 180 1.6E-51 T 13-10-2018 IPR017861 Kae1/TsaD family COP00_19480 2adadf42fc0089438b8050375d261e70 341 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 10 23 1.6E-51 T 13-10-2018 IPR017861 Kae1/TsaD family COP00_19480 2adadf42fc0089438b8050375d261e70 341 Gene3D G3DSA:3.30.420.40 134 300 5.2E-125 T 13-10-2018 COP00_19480 2adadf42fc0089438b8050375d261e70 341 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 9 320 2.4E-134 T 13-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 COP00_19480 2adadf42fc0089438b8050375d261e70 341 Gene3D G3DSA:3.30.420.40 9 322 5.2E-125 T 13-10-2018 COP00_19480 2adadf42fc0089438b8050375d261e70 341 SUPERFAMILY SSF53067 8 128 2.2E-31 T 13-10-2018 COP00_19480 2adadf42fc0089438b8050375d261e70 341 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 10 313 3.2E-110 T 13-10-2018 IPR017861 Kae1/TsaD family COP00_19480 2adadf42fc0089438b8050375d261e70 341 Pfam PF00814 Glycoprotease family 30 313 2.5E-105 T 13-10-2018 IPR000905 Gcp-like domain COP00_19480 2adadf42fc0089438b8050375d261e70 341 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 7 338 64.87 T 13-10-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 COP00_19480 2adadf42fc0089438b8050375d261e70 341 SUPERFAMILY SSF53067 107 315 1.64E-45 T 13-10-2018 COP00_23855 eb0c772629b856444996d0051dbb0658 277 SUPERFAMILY SSF48179 160 265 3.4E-16 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 COP00_23855 eb0c772629b856444996d0051dbb0658 277 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 3 98 1.1E-16 T 13-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal COP00_23855 eb0c772629b856444996d0051dbb0658 277 Gene3D G3DSA:1.10.3730.10 163 266 2.2E-14 T 13-10-2018 COP00_23855 eb0c772629b856444996d0051dbb0658 277 Gene3D G3DSA:3.40.50.720 2 162 1.4E-32 T 13-10-2018 COP00_23855 eb0c772629b856444996d0051dbb0658 277 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 160 263 3.1E-14 T 13-10-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 COP00_23855 eb0c772629b856444996d0051dbb0658 277 SUPERFAMILY SSF51735 3 155 9.17E-23 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily COP00_23855 eb0c772629b856444996d0051dbb0658 277 PIRSF PIRSF000193 1 266 7.6E-70 T 13-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 COP00_18120 0c83b5d2911789b640ced0c9d39bb450 515 TIGRFAM TIGR01237 D1pyr5carbox2: putative delta-1-pyrroline-5-carboxylate dehydrogenase 5 515 2.4E-280 T 13-10-2018 IPR005932 Putative 1-pyrroline-5-carboxylate dehydrogenase, Bacillales KEGG: 00250+1.2.1.88|KEGG: 00330+1.2.1.88|MetaCyc: PWY-6853 COP00_18120 0c83b5d2911789b640ced0c9d39bb450 515 Hamap MF_00733 1-pyrroline-5-carboxylate dehydrogenase [rocA]. 1 515 67.17 T 13-10-2018 IPR005932 Putative 1-pyrroline-5-carboxylate dehydrogenase, Bacillales KEGG: 00250+1.2.1.88|KEGG: 00330+1.2.1.88|MetaCyc: PWY-6853 COP00_18120 0c83b5d2911789b640ced0c9d39bb450 515 Pfam PF00171 Aldehyde dehydrogenase family 49 511 1.0E-156 T 13-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 COP00_18120 0c83b5d2911789b640ced0c9d39bb450 515 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 313 324 - T 13-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 COP00_18120 0c83b5d2911789b640ced0c9d39bb450 515 Gene3D G3DSA:3.40.309.10 290 480 3.6E-193 T 13-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 COP00_18120 0c83b5d2911789b640ced0c9d39bb450 515 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 285 292 - T 13-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 COP00_18120 0c83b5d2911789b640ced0c9d39bb450 515 Gene3D G3DSA:3.40.605.10 9 511 3.6E-193 T 13-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 COP00_18120 0c83b5d2911789b640ced0c9d39bb450 515 SUPERFAMILY SSF53720 4 511 1.31E-157 T 13-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 COP00_02265 be4d7116e9045fc356ef0f3f6b6a62f4 854 Pfam PF12708 Pectate lyase superfamily protein 103 330 6.7E-27 T 13-10-2018 IPR024535 Pectate lyase superfamily protein COP00_02265 be4d7116e9045fc356ef0f3f6b6a62f4 854 SMART SM00710 184 218 5400.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat COP00_02265 be4d7116e9045fc356ef0f3f6b6a62f4 854 SMART SM00710 316 337 2700.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat COP00_02265 be4d7116e9045fc356ef0f3f6b6a62f4 854 SMART SM00710 470 492 830.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat COP00_02265 be4d7116e9045fc356ef0f3f6b6a62f4 854 SMART SM00710 219 241 1400.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat COP00_02265 be4d7116e9045fc356ef0f3f6b6a62f4 854 SMART SM00710 494 519 6100.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat COP00_02265 be4d7116e9045fc356ef0f3f6b6a62f4 854 SMART SM00710 282 314 1500.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat COP00_02265 be4d7116e9045fc356ef0f3f6b6a62f4 854 SMART SM00710 259 281 500.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat COP00_02265 be4d7116e9045fc356ef0f3f6b6a62f4 854 Pfam PF11962 Peptidase_G2, IMC autoproteolytic cleavage domain 634 854 1.0E-79 T 13-10-2018 IPR021865 Peptidase G2, IMC autoproteolytic cleavage domain COP00_02265 be4d7116e9045fc356ef0f3f6b6a62f4 854 Gene3D G3DSA:2.40.300.10 689 852 1.3E-67 T 13-10-2018 COP00_02265 be4d7116e9045fc356ef0f3f6b6a62f4 854 SUPERFAMILY SSF51126 100 452 5.16E-36 T 13-10-2018 IPR011050 Pectin lyase fold/virulence factor COP00_02265 be4d7116e9045fc356ef0f3f6b6a62f4 854 Gene3D G3DSA:2.160.20.10 83 551 7.5E-126 T 13-10-2018 IPR012334 Pectin lyase fold COP00_02265 be4d7116e9045fc356ef0f3f6b6a62f4 854 Gene3D G3DSA:4.10.80.40 742 782 1.3E-67 T 13-10-2018 COP00_03555 cb9f9364a2aa351d8370b58060880a89 279 Gene3D G3DSA:3.30.572.10 2 279 1.4E-117 T 13-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 COP00_03555 cb9f9364a2aa351d8370b58060880a89 279 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 101 279 2.1E-53 T 13-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 COP00_03555 cb9f9364a2aa351d8370b58060880a89 279 ProSitePatterns PS00091 Thymidylate synthase active site. 141 169 - T 13-10-2018 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 COP00_03555 cb9f9364a2aa351d8370b58060880a89 279 PRINTS PR00108 Thymidylate synthase family signature 156 171 6.1E-34 T 13-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 COP00_03555 cb9f9364a2aa351d8370b58060880a89 279 PRINTS PR00108 Thymidylate synthase family signature 130 149 6.1E-34 T 13-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 COP00_03555 cb9f9364a2aa351d8370b58060880a89 279 PRINTS PR00108 Thymidylate synthase family signature 212 229 6.1E-34 T 13-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 COP00_03555 cb9f9364a2aa351d8370b58060880a89 279 PRINTS PR00108 Thymidylate synthase family signature 174 200 6.1E-34 T 13-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 COP00_03555 cb9f9364a2aa351d8370b58060880a89 279 PRINTS PR00108 Thymidylate synthase family signature 55 76 6.1E-34 T 13-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 COP00_03555 cb9f9364a2aa351d8370b58060880a89 279 SUPERFAMILY SSF55831 3 279 9.95E-99 T 13-10-2018 IPR036926 Thymidylate synthase/dCMP hydroxymethylase superfamily KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 COP00_03555 cb9f9364a2aa351d8370b58060880a89 279 Hamap MF_00008 Thymidylate synthase [thyA]. 5 279 38.481 T 13-10-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 COP00_03555 cb9f9364a2aa351d8370b58060880a89 279 Pfam PF00303 Thymidylate synthase 6 279 1.9E-91 T 13-10-2018 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 COP00_21830 0f7ccef9d0b0de535e9254c818204f5f 163 Pfam PF08281 Sigma-70, region 4 102 152 2.6E-13 T 13-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 COP00_21830 0f7ccef9d0b0de535e9254c818204f5f 163 TIGRFAM TIGR02950 SigM_subfam: RNA polymerase sigma factor, SigM family 2 156 6.7E-71 T 13-10-2018 IPR014296 RNA polymerase sigma-M, bacillaceae GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 COP00_21830 0f7ccef9d0b0de535e9254c818204f5f 163 Gene3D G3DSA:1.10.1740.10 2 74 6.3E-22 T 13-10-2018 COP00_21830 0f7ccef9d0b0de535e9254c818204f5f 163 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 28 58 - T 13-10-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 COP00_21830 0f7ccef9d0b0de535e9254c818204f5f 163 Pfam PF04542 Sigma-70 region 2 6 72 4.7E-19 T 13-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 COP00_21830 0f7ccef9d0b0de535e9254c818204f5f 163 SUPERFAMILY SSF88659 93 156 4.67E-14 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like COP00_21830 0f7ccef9d0b0de535e9254c818204f5f 163 SUPERFAMILY SSF88946 4 81 4.19E-22 T 13-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 COP00_21830 0f7ccef9d0b0de535e9254c818204f5f 163 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 3 153 9.7E-30 T 13-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 COP00_21830 0f7ccef9d0b0de535e9254c818204f5f 163 Gene3D G3DSA:1.10.10.10 94 158 1.0E-14 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_22200 7302e2e1d164cbe07201f99a674c757f 167 Gene3D G3DSA:3.30.70.3430 1 167 1.8E-67 T 13-10-2018 COP00_22200 7302e2e1d164cbe07201f99a674c757f 167 SUPERFAMILY SSF54909 66 146 2.22E-23 T 13-10-2018 IPR011008 Dimeric alpha-beta barrel COP00_22200 7302e2e1d164cbe07201f99a674c757f 167 Pfam PF03992 Antibiotic biosynthesis monooxygenase 66 139 1.3E-14 T 13-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain COP00_22455 bf00bfbdc0a1651d687876b1bda77355 263 Gene3D G3DSA:3.40.190.10 39 260 2.3E-83 T 13-10-2018 COP00_22455 bf00bfbdc0a1651d687876b1bda77355 263 Pfam PF13531 Bacterial extracellular solute-binding protein 37 260 5.0E-55 T 13-10-2018 COP00_22455 bf00bfbdc0a1651d687876b1bda77355 263 SUPERFAMILY SSF53850 36 260 3.08E-70 T 13-10-2018 COP00_22455 bf00bfbdc0a1651d687876b1bda77355 263 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 42 259 3.7E-71 T 13-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 COP00_22455 bf00bfbdc0a1651d687876b1bda77355 263 PIRSF PIRSF004846 1 262 5.1E-94 T 13-10-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689 COP00_22455 bf00bfbdc0a1651d687876b1bda77355 263 Gene3D G3DSA:3.40.190.10 116 223 2.3E-83 T 13-10-2018 COP00_21860 05da8436c274739cf8c7bfb52f5a7f8e 457 Pfam PF01595 Domain of unknown function DUF21 9 202 2.3E-51 T 13-10-2018 IPR002550 CNNM, transmembrane domain COP00_21860 05da8436c274739cf8c7bfb52f5a7f8e 457 SMART SM01091 357 434 1.4E-19 T 13-10-2018 IPR005170 Transporter-associated domain COP00_21860 05da8436c274739cf8c7bfb52f5a7f8e 457 Pfam PF03471 Transporter associated domain 358 432 1.2E-17 T 13-10-2018 IPR005170 Transporter-associated domain COP00_21860 05da8436c274739cf8c7bfb52f5a7f8e 457 SUPERFAMILY SSF56176 354 435 4.64E-16 T 13-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 COP00_21860 05da8436c274739cf8c7bfb52f5a7f8e 457 Gene3D G3DSA:3.30.465.10 351 441 1.3E-16 T 13-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 COP00_21860 05da8436c274739cf8c7bfb52f5a7f8e 457 Gene3D G3DSA:3.10.580.10 197 350 2.1E-50 T 13-10-2018 COP00_21860 05da8436c274739cf8c7bfb52f5a7f8e 457 SUPERFAMILY SSF54631 205 344 2.15E-30 T 13-10-2018 COP00_21860 05da8436c274739cf8c7bfb52f5a7f8e 457 Pfam PF00571 CBS domain 218 270 4.2E-6 T 13-10-2018 IPR000644 CBS domain COP00_06990 a318b7f0c89d8e2a1169b71156a37ab5 49 Pfam PF00471 Ribosomal protein L33 3 49 4.3E-22 T 13-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_06990 a318b7f0c89d8e2a1169b71156a37ab5 49 Gene3D G3DSA:2.20.28.120 1 49 1.1E-23 T 13-10-2018 IPR038584 Ribosomal protein L33 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_06990 a318b7f0c89d8e2a1169b71156a37ab5 49 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 1 49 19.083 T 13-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_06990 a318b7f0c89d8e2a1169b71156a37ab5 49 SUPERFAMILY SSF57829 1 49 1.59E-18 T 13-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 COP00_06990 a318b7f0c89d8e2a1169b71156a37ab5 49 ProSitePatterns PS00582 Ribosomal protein L33 signature. 17 36 - T 13-10-2018 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 COP00_06990 a318b7f0c89d8e2a1169b71156a37ab5 49 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 3 49 2.3E-19 T 13-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_15265 e5130da4ab501f249b826586b623016c 287 Pfam PF01261 Xylose isomerase-like TIM barrel 23 241 1.8E-38 T 13-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain COP00_15265 e5130da4ab501f249b826586b623016c 287 Gene3D G3DSA:3.20.20.150 1 284 3.3E-47 T 13-10-2018 COP00_15265 e5130da4ab501f249b826586b623016c 287 SUPERFAMILY SSF51658 1 285 1.96E-54 T 13-10-2018 IPR036237 Xylose isomerase-like superfamily COP00_01500 3986d67000d5bf1aced336ec654c62da 247 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 6 17 - T 13-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 COP00_01500 3986d67000d5bf1aced336ec654c62da 247 Gene3D G3DSA:3.40.50.10490 10 215 1.2E-97 T 13-10-2018 COP00_01500 3986d67000d5bf1aced336ec654c62da 247 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 2 228 44.407 T 13-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_01500 3986d67000d5bf1aced336ec654c62da 247 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 3 226 5.9E-115 T 13-10-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_01500 3986d67000d5bf1aced336ec654c62da 247 PRINTS PR00395 Ribosomal protein S2 signature 158 175 2.6E-42 T 13-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 COP00_01500 3986d67000d5bf1aced336ec654c62da 247 PRINTS PR00395 Ribosomal protein S2 signature 6 24 2.6E-42 T 13-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 COP00_01500 3986d67000d5bf1aced336ec654c62da 247 PRINTS PR00395 Ribosomal protein S2 signature 37 46 2.6E-42 T 13-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 COP00_01500 3986d67000d5bf1aced336ec654c62da 247 PRINTS PR00395 Ribosomal protein S2 signature 87 104 2.6E-42 T 13-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 COP00_01500 3986d67000d5bf1aced336ec654c62da 247 PRINTS PR00395 Ribosomal protein S2 signature 175 186 2.6E-42 T 13-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 COP00_01500 3986d67000d5bf1aced336ec654c62da 247 PRINTS PR00395 Ribosomal protein S2 signature 196 210 2.6E-42 T 13-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 COP00_01500 3986d67000d5bf1aced336ec654c62da 247 Pfam PF00318 Ribosomal protein S2 9 224 2.1E-103 T 13-10-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 COP00_01500 3986d67000d5bf1aced336ec654c62da 247 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 158 182 - T 13-10-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 COP00_01500 3986d67000d5bf1aced336ec654c62da 247 Gene3D G3DSA:1.10.287.610 97 152 1.2E-97 T 13-10-2018 COP00_01500 3986d67000d5bf1aced336ec654c62da 247 SUPERFAMILY SSF52313 6 233 3.66E-102 T 13-10-2018 IPR023591 Ribosomal protein S2, flavodoxin-like domain superfamily COP00_19230 6965cfea3e3ea8015abc4087706a490e 322 SUPERFAMILY SSF103481 211 293 2.62E-9 T 13-10-2018 COP00_19230 6965cfea3e3ea8015abc4087706a490e 322 Pfam PF00892 EamA-like transporter family 8 149 1.6E-24 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 COP00_19230 6965cfea3e3ea8015abc4087706a490e 322 Pfam PF00892 EamA-like transporter family 161 294 5.0E-19 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 COP00_19230 6965cfea3e3ea8015abc4087706a490e 322 SUPERFAMILY SSF103481 44 151 1.7E-11 T 13-10-2018 COP00_17665 e8153151114cfeb263805e4a86ebd421 443 PRINTS PR00344 Bacterial sensor protein C-terminal signature 399 417 3.4E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 COP00_17665 e8153151114cfeb263805e4a86ebd421 443 PRINTS PR00344 Bacterial sensor protein C-terminal signature 365 379 3.4E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 COP00_17665 e8153151114cfeb263805e4a86ebd421 443 PRINTS PR00344 Bacterial sensor protein C-terminal signature 422 435 3.4E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 COP00_17665 e8153151114cfeb263805e4a86ebd421 443 PRINTS PR00344 Bacterial sensor protein C-terminal signature 383 393 3.4E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 COP00_17665 e8153151114cfeb263805e4a86ebd421 443 Gene3D G3DSA:3.30.565.10 288 439 8.1E-26 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily COP00_17665 e8153151114cfeb263805e4a86ebd421 443 SUPERFAMILY SSF55874 296 435 6.81E-25 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily COP00_17665 e8153151114cfeb263805e4a86ebd421 443 SMART SM00387 327 438 6.8E-20 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase COP00_17665 e8153151114cfeb263805e4a86ebd421 443 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 334 437 2.7E-13 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase COP00_15510 49b20b2e142770a72dc359b1a3a5ef3a 450 ProSitePatterns PS00218 Amino acid permeases signature. 39 69 - T 13-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 COP00_15510 49b20b2e142770a72dc359b1a3a5ef3a 450 Gene3D G3DSA:1.20.1740.10 5 450 3.3E-62 T 13-10-2018 COP00_15510 49b20b2e142770a72dc359b1a3a5ef3a 450 Pfam PF00324 Amino acid permease 14 447 9.3E-104 T 13-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 COP00_15510 49b20b2e142770a72dc359b1a3a5ef3a 450 PIRSF PIRSF006060 1 448 1.1E-69 T 13-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 COP00_16855 1004fc8362ecdb1a5d1f6196b46917c0 130 ProSitePatterns PS00360 Ribosomal protein S9 signature. 69 87 - T 13-10-2018 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 COP00_16855 1004fc8362ecdb1a5d1f6196b46917c0 130 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 130 34.934 T 13-10-2018 IPR023035 Ribosomal protein S9, bacterial/plastid COP00_16855 1004fc8362ecdb1a5d1f6196b46917c0 130 Pfam PF00380 Ribosomal protein S9/S16 10 130 1.3E-46 T 13-10-2018 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 COP00_16855 1004fc8362ecdb1a5d1f6196b46917c0 130 Gene3D G3DSA:3.30.230.10 1 130 3.9E-52 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup COP00_16855 1004fc8362ecdb1a5d1f6196b46917c0 130 SUPERFAMILY SSF54211 5 130 3.49E-48 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold COP00_01340 68aec53d1ebfba718999823d44f379db 129 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 4 125 1.7E-37 T 13-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 COP00_01340 68aec53d1ebfba718999823d44f379db 129 PIRSF PIRSF002889 1 128 3.3E-35 T 13-10-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 COP00_01340 68aec53d1ebfba718999823d44f379db 129 Pfam PF00460 Flagella basal body rod protein 9 38 2.3E-10 T 13-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 COP00_01340 68aec53d1ebfba718999823d44f379db 129 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 14 34 - T 13-10-2018 IPR019776 Flagellar basal body rod protein, conserved site COP00_05555 6f95be2e39e70ae06f6d49d0bbf01c9f 267 SUPERFAMILY SSF55347 130 238 2.83E-37 T 13-10-2018 COP00_05555 6f95be2e39e70ae06f6d49d0bbf01c9f 267 SUPERFAMILY SSF51735 4 154 1.08E-35 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily COP00_05555 6f95be2e39e70ae06f6d49d0bbf01c9f 267 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 6 267 30.691 T 13-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 COP00_05555 6f95be2e39e70ae06f6d49d0bbf01c9f 267 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 5 267 2.4E-93 T 13-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 COP00_05555 6f95be2e39e70ae06f6d49d0bbf01c9f 267 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 132 265 1.9E-34 T 13-10-2018 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 COP00_05555 6f95be2e39e70ae06f6d49d0bbf01c9f 267 PIRSF PIRSF000161 4 267 1.5E-70 T 13-10-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 COP00_05555 6f95be2e39e70ae06f6d49d0bbf01c9f 267 Gene3D G3DSA:3.30.360.10 131 236 2.2E-77 T 13-10-2018 COP00_05555 6f95be2e39e70ae06f6d49d0bbf01c9f 267 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 151 168 - T 13-10-2018 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 COP00_05555 6f95be2e39e70ae06f6d49d0bbf01c9f 267 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 6 129 1.7E-31 T 13-10-2018 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 COP00_05555 6f95be2e39e70ae06f6d49d0bbf01c9f 267 Gene3D G3DSA:3.40.50.720 7 264 2.2E-77 T 13-10-2018 COP00_00750 c14ada39ee8a56290e214ab05870c645 90 PIRSF PIRSF031653 1 90 2.5E-34 T 13-10-2018 IPR016979 Protein of unknown function DUF2129 COP00_00750 c14ada39ee8a56290e214ab05870c645 90 Hamap MF_01126 UPF0298 protein . 1 78 22.048 T 13-10-2018 IPR016979 Protein of unknown function DUF2129 COP00_00750 c14ada39ee8a56290e214ab05870c645 90 Pfam PF09902 Uncharacterized protein conserved in bacteria (DUF2129) 5 74 1.9E-30 T 13-10-2018 IPR016979 Protein of unknown function DUF2129 COP00_04735 f077d542b1a9c7e8e3432048b8f58703 1482 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1197 1212 - T 13-10-2018 IPR006162 Phosphopantetheine attachment site COP00_04735 f077d542b1a9c7e8e3432048b8f58703 1482 SUPERFAMILY SSF56801 1 149 4.19E-46 T 13-10-2018 COP00_04735 f077d542b1a9c7e8e3432048b8f58703 1482 SUPERFAMILY SSF53474 1250 1476 2.24E-30 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold COP00_04735 f077d542b1a9c7e8e3432048b8f58703 1482 Gene3D G3DSA:3.30.559.10 223 580 2.6E-147 T 13-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 COP00_04735 f077d542b1a9c7e8e3432048b8f58703 1482 Gene3D G3DSA:3.30.559.30 391 635 2.6E-147 T 13-10-2018 COP00_04735 f077d542b1a9c7e8e3432048b8f58703 1482 Pfam PF00975 Thioesterase domain 1263 1381 1.6E-20 T 13-10-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 COP00_04735 f077d542b1a9c7e8e3432048b8f58703 1482 Gene3D G3DSA:3.40.50.1820 1259 1472 2.7E-53 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold COP00_04735 f077d542b1a9c7e8e3432048b8f58703 1482 Gene3D G3DSA:1.10.1200.10 1162 1246 1.2E-26 T 13-10-2018 IPR036736 ACP-like superfamily COP00_04735 f077d542b1a9c7e8e3432048b8f58703 1482 Gene3D G3DSA:1.10.1200.10 126 205 4.9E-28 T 13-10-2018 IPR036736 ACP-like superfamily COP00_04735 f077d542b1a9c7e8e3432048b8f58703 1482 ProSitePatterns PS00012 Phosphopantetheine attachment site. 160 175 - T 13-10-2018 IPR006162 Phosphopantetheine attachment site COP00_04735 f077d542b1a9c7e8e3432048b8f58703 1482 Gene3D G3DSA:1.10.287.490 1363 1418 2.7E-53 T 13-10-2018 COP00_04735 f077d542b1a9c7e8e3432048b8f58703 1482 SUPERFAMILY SSF47336 1165 1239 2.49E-20 T 13-10-2018 IPR036736 ACP-like superfamily COP00_04735 f077d542b1a9c7e8e3432048b8f58703 1482 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 693 1090 2.2E-133 T 13-10-2018 IPR010071 Amino acid adenylation domain COP00_04735 f077d542b1a9c7e8e3432048b8f58703 1482 SUPERFAMILY SSF52777 225 387 2.82E-43 T 13-10-2018 COP00_04735 f077d542b1a9c7e8e3432048b8f58703 1482 SUPERFAMILY SSF47336 129 201 4.19E-20 T 13-10-2018 IPR036736 ACP-like superfamily COP00_04735 f077d542b1a9c7e8e3432048b8f58703 1482 PIRSF PIRSF001617 1 78 1.8E-19 T 13-10-2018 COP00_04735 f077d542b1a9c7e8e3432048b8f58703 1482 PIRSF PIRSF001617 784 1036 1.5E-20 T 13-10-2018 COP00_04735 f077d542b1a9c7e8e3432048b8f58703 1482 PIRSF PIRSF001617 72 244 1.1E-21 T 13-10-2018 COP00_04735 f077d542b1a9c7e8e3432048b8f58703 1482 PIRSF PIRSF001617 396 779 1.5E-21 T 13-10-2018 COP00_04735 f077d542b1a9c7e8e3432048b8f58703 1482 PIRSF PIRSF001617 1032 1117 6.2E-24 T 13-10-2018 COP00_04735 f077d542b1a9c7e8e3432048b8f58703 1482 PIRSF PIRSF001617 1112 1264 6.2E-20 T 13-10-2018 COP00_04735 f077d542b1a9c7e8e3432048b8f58703 1482 Pfam PF00501 AMP-binding enzyme 672 1066 5.2E-103 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 COP00_04735 f077d542b1a9c7e8e3432048b8f58703 1482 Pfam PF00501 AMP-binding enzyme 1 29 4.7E-7 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 COP00_04735 f077d542b1a9c7e8e3432048b8f58703 1482 Pfam PF13193 AMP-binding enzyme C-terminal domain 37 110 1.3E-10 T 13-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain COP00_04735 f077d542b1a9c7e8e3432048b8f58703 1482 Pfam PF13193 AMP-binding enzyme C-terminal domain 1074 1147 2.2E-11 T 13-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain COP00_04735 f077d542b1a9c7e8e3432048b8f58703 1482 Gene3D G3DSA:2.30.38.10 1 23 3.7E-7 T 13-10-2018 COP00_04735 f077d542b1a9c7e8e3432048b8f58703 1482 Gene3D G3DSA:3.40.50.12780 657 1060 7.9E-134 T 13-10-2018 COP00_04735 f077d542b1a9c7e8e3432048b8f58703 1482 SUPERFAMILY SSF52777 396 657 4.34E-59 T 13-10-2018 COP00_04735 f077d542b1a9c7e8e3432048b8f58703 1482 Gene3D G3DSA:3.30.300.30 1061 1161 2.4E-32 T 13-10-2018 COP00_04735 f077d542b1a9c7e8e3432048b8f58703 1482 Gene3D G3DSA:3.30.300.30 24 125 2.0E-34 T 13-10-2018 COP00_04735 f077d542b1a9c7e8e3432048b8f58703 1482 Pfam PF00668 Condensation domain 219 651 2.5E-130 T 13-10-2018 IPR001242 Condensation domain COP00_04735 f077d542b1a9c7e8e3432048b8f58703 1482 SMART SM00823 Phosphopantetheine attachment site 136 205 5.6E-7 T 13-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 COP00_04735 f077d542b1a9c7e8e3432048b8f58703 1482 SMART SM00823 Phosphopantetheine attachment site 1173 1242 4.5E-4 T 13-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 COP00_04735 f077d542b1a9c7e8e3432048b8f58703 1482 Pfam PF00550 Phosphopantetheine attachment site 1176 1238 2.1E-13 T 13-10-2018 IPR009081 Phosphopantetheine binding ACP domain COP00_04735 f077d542b1a9c7e8e3432048b8f58703 1482 Pfam PF00550 Phosphopantetheine attachment site 138 201 9.2E-16 T 13-10-2018 IPR009081 Phosphopantetheine binding ACP domain COP00_04735 f077d542b1a9c7e8e3432048b8f58703 1482 SUPERFAMILY SSF56801 628 1185 1.31E-157 T 13-10-2018 COP00_04735 f077d542b1a9c7e8e3432048b8f58703 1482 ProSitePatterns PS00455 Putative AMP-binding domain signature. 810 821 - T 13-10-2018 IPR020845 AMP-binding, conserved site COP00_15145 c1b8fc1c2198c84281ca2ff972ff9566 469 Pfam PF00232 Glycosyl hydrolase family 1 6 466 1.4E-149 T 13-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 COP00_15145 c1b8fc1c2198c84281ca2ff972ff9566 469 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 12 26 - T 13-10-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site COP00_15145 c1b8fc1c2198c84281ca2ff972ff9566 469 SUPERFAMILY SSF51445 6 466 2.6E-169 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily COP00_15145 c1b8fc1c2198c84281ca2ff972ff9566 469 PRINTS PR00131 Glycosyl hydrolase family 1 signature 364 372 4.9E-17 T 13-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 COP00_15145 c1b8fc1c2198c84281ca2ff972ff9566 469 PRINTS PR00131 Glycosyl hydrolase family 1 signature 431 443 4.9E-17 T 13-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 COP00_15145 c1b8fc1c2198c84281ca2ff972ff9566 469 PRINTS PR00131 Glycosyl hydrolase family 1 signature 298 312 4.9E-17 T 13-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 COP00_15145 c1b8fc1c2198c84281ca2ff972ff9566 469 PRINTS PR00131 Glycosyl hydrolase family 1 signature 385 396 4.9E-17 T 13-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 COP00_15145 c1b8fc1c2198c84281ca2ff972ff9566 469 PRINTS PR00131 Glycosyl hydrolase family 1 signature 406 423 4.9E-17 T 13-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 COP00_15145 c1b8fc1c2198c84281ca2ff972ff9566 469 Gene3D G3DSA:3.20.20.80 7 469 8.4E-160 T 13-10-2018 COP00_15145 c1b8fc1c2198c84281ca2ff972ff9566 469 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 364 372 - T 13-10-2018 IPR018120 Glycoside hydrolase family 1, active site COP00_11065 24546f0d7ec6a733965850ae5722dad2 272 SMART SM00382 28 238 2.1E-14 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_11065 24546f0d7ec6a733965850ae5722dad2 272 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 COP00_11065 24546f0d7ec6a733965850ae5722dad2 272 Gene3D G3DSA:3.40.50.300 1 252 2.8E-65 T 13-10-2018 COP00_11065 24546f0d7ec6a733965850ae5722dad2 272 SUPERFAMILY SSF52540 4 229 1.2E-59 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_11065 24546f0d7ec6a733965850ae5722dad2 272 Pfam PF00005 ABC transporter 20 167 1.9E-32 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 COP00_13155 e9bca310615828af8cc6253902c981ed 354 Pfam PF00953 Glycosyl transferase family 4 75 229 1.6E-42 T 13-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 COP00_13155 e9bca310615828af8cc6253902c981ed 354 ProSitePatterns PS01348 MraY family signature 2. 149 160 - T 13-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 COP00_24180 88e63da0c809ffa4a156871f0a7d47fa 256 Gene3D G3DSA:3.30.1330.60 87 253 8.3E-47 T 13-10-2018 IPR036737 OmpA-like domain superfamily COP00_24180 88e63da0c809ffa4a156871f0a7d47fa 256 SUPERFAMILY SSF103088 125 246 1.28E-29 T 13-10-2018 IPR036737 OmpA-like domain superfamily COP00_24180 88e63da0c809ffa4a156871f0a7d47fa 256 Pfam PF00691 OmpA family 138 238 4.3E-15 T 13-10-2018 IPR006665 OmpA-like domain COP00_24180 88e63da0c809ffa4a156871f0a7d47fa 256 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 3 57 3.5E-22 T 13-10-2018 IPR025713 Motility protein B, N-terminal domain COP00_22295 6ef7f2b83de5d7e4204c47fd1512e34a 359 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 148 158 - T 13-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site COP00_22295 6ef7f2b83de5d7e4204c47fd1512e34a 359 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 303 313 - T 13-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site COP00_22295 6ef7f2b83de5d7e4204c47fd1512e34a 359 Gene3D G3DSA:3.30.70.80 12 87 7.6E-25 T 13-10-2018 IPR037045 Peptidase S8 propeptide/proteinase inhibitor I9 superfamily Reactome: R-HSA-381426|Reactome: R-HSA-8866427|Reactome: R-HSA-8957275|Reactome: R-HSA-8964038 COP00_22295 6ef7f2b83de5d7e4204c47fd1512e34a 359 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 113 124 - T 13-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site COP00_22295 6ef7f2b83de5d7e4204c47fd1512e34a 359 Pfam PF00082 Subtilase family 108 350 2.7E-58 T 13-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 COP00_22295 6ef7f2b83de5d7e4204c47fd1512e34a 359 PRINTS PR00723 Subtilisin serine protease family (S8) signature 144 157 2.4E-22 T 13-10-2018 IPR015500 Peptidase S8, subtilisin-related COP00_22295 6ef7f2b83de5d7e4204c47fd1512e34a 359 PRINTS PR00723 Subtilisin serine protease family (S8) signature 302 318 2.4E-22 T 13-10-2018 IPR015500 Peptidase S8, subtilisin-related COP00_22295 6ef7f2b83de5d7e4204c47fd1512e34a 359 PRINTS PR00723 Subtilisin serine protease family (S8) signature 108 127 2.4E-22 T 13-10-2018 IPR015500 Peptidase S8, subtilisin-related COP00_22295 6ef7f2b83de5d7e4204c47fd1512e34a 359 SUPERFAMILY SSF54897 17 84 5.38E-21 T 13-10-2018 COP00_22295 6ef7f2b83de5d7e4204c47fd1512e34a 359 Gene3D G3DSA:3.40.50.200 88 359 2.3E-108 T 13-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 COP00_22295 6ef7f2b83de5d7e4204c47fd1512e34a 359 Pfam PF05922 Peptidase inhibitor I9 26 82 1.5E-4 T 13-10-2018 IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 Reactome: R-HSA-381426|Reactome: R-HSA-8866427|Reactome: R-HSA-8957275|Reactome: R-HSA-8964038 COP00_22295 6ef7f2b83de5d7e4204c47fd1512e34a 359 SUPERFAMILY SSF52743 86 358 2.09E-94 T 13-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 COP00_05270 94ead91c97393838b6ec31fe8be439b1 383 Pfam PF06925 Monogalactosyldiacylglycerol (MGDG) synthase 18 179 2.8E-45 T 13-10-2018 IPR009695 Diacylglycerol glucosyltransferase, N-terminal GO:0009247|GO:0016758 COP00_05270 94ead91c97393838b6ec31fe8be439b1 383 Pfam PF00534 Glycosyl transferases group 1 200 350 8.5E-16 T 13-10-2018 IPR001296 Glycosyl transferase, family 1 COP00_05270 94ead91c97393838b6ec31fe8be439b1 383 Hamap MF_01280 Processive diacylglycerol beta-glucosyltransferase [ugtP]. 1 383 53.341 T 13-10-2018 IPR023589 Processive diacylglycerol beta-glucosyltransferase GO:0047228 KEGG: 00561+2.4.1.315|MetaCyc: PWY-7817 COP00_05270 94ead91c97393838b6ec31fe8be439b1 383 SUPERFAMILY SSF53756 5 366 5.86E-43 T 13-10-2018 COP00_05270 94ead91c97393838b6ec31fe8be439b1 383 Gene3D G3DSA:3.40.50.2000 186 353 4.9E-35 T 13-10-2018 COP00_16620 5bb17c63aab2d354c875c45f752106e0 232 SUPERFAMILY SSF56808 6 226 9.94E-86 T 13-10-2018 IPR023674 Ribosomal protein L1-like COP00_16620 5bb17c63aab2d354c875c45f752106e0 232 Pfam PF00687 Ribosomal protein L1p/L10e family 31 220 4.1E-55 T 13-10-2018 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein COP00_16620 5bb17c63aab2d354c875c45f752106e0 232 PIRSF PIRSF002155 1 227 1.1E-81 T 13-10-2018 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 COP00_16620 5bb17c63aab2d354c875c45f752106e0 232 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 227 5.4E-109 T 13-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 COP00_16620 5bb17c63aab2d354c875c45f752106e0 232 Gene3D G3DSA:3.40.50.790 68 159 3.7E-87 T 13-10-2018 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich COP00_16620 5bb17c63aab2d354c875c45f752106e0 232 Gene3D G3DSA:3.30.190.20 21 225 3.7E-87 T 13-10-2018 COP00_16620 5bb17c63aab2d354c875c45f752106e0 232 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 45.003 T 13-10-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 COP00_16620 5bb17c63aab2d354c875c45f752106e0 232 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 13-10-2018 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 COP00_15085 ec094cf7232f11b337c98bed6c0394ce 529 SUPERFAMILY SSF52540 279 504 1.04E-54 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_15085 ec094cf7232f11b337c98bed6c0394ce 529 SUPERFAMILY SSF52540 5 222 9.11E-51 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_15085 ec094cf7232f11b337c98bed6c0394ce 529 Gene3D G3DSA:3.40.50.300 276 527 3.2E-61 T 13-10-2018 COP00_15085 ec094cf7232f11b337c98bed6c0394ce 529 Gene3D G3DSA:3.40.50.300 2 236 6.8E-59 T 13-10-2018 COP00_15085 ec094cf7232f11b337c98bed6c0394ce 529 Pfam PF00005 ABC transporter 296 440 2.2E-25 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 COP00_15085 ec094cf7232f11b337c98bed6c0394ce 529 SMART SM00382 31 210 4.3E-11 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_15085 ec094cf7232f11b337c98bed6c0394ce 529 SMART SM00382 304 489 4.5E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_15085 ec094cf7232f11b337c98bed6c0394ce 529 ProSitePatterns PS00211 ABC transporters family signature. 413 427 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 COP00_15085 ec094cf7232f11b337c98bed6c0394ce 529 Pfam PF00005 ABC transporter 22 160 2.1E-26 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 COP00_15085 ec094cf7232f11b337c98bed6c0394ce 529 ProSitePatterns PS00211 ABC transporters family signature. 132 146 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 COP00_14410 740865c4acbccd30de409eb365c8fc56 270 Pfam PF02110 Hydroxyethylthiazole kinase family 10 256 3.3E-91 T 13-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 COP00_14410 740865c4acbccd30de409eb365c8fc56 270 TIGRFAM TIGR00694 thiM: hydroxyethylthiazole kinase 10 258 1.2E-94 T 13-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 COP00_14410 740865c4acbccd30de409eb365c8fc56 270 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 88 105 9.4E-43 T 13-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 COP00_14410 740865c4acbccd30de409eb365c8fc56 270 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 31 52 9.4E-43 T 13-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 COP00_14410 740865c4acbccd30de409eb365c8fc56 270 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 164 181 9.4E-43 T 13-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 COP00_14410 740865c4acbccd30de409eb365c8fc56 270 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 18 25 9.4E-43 T 13-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 COP00_14410 740865c4acbccd30de409eb365c8fc56 270 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 119 133 9.4E-43 T 13-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 COP00_14410 740865c4acbccd30de409eb365c8fc56 270 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 62 70 9.4E-43 T 13-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 COP00_14410 740865c4acbccd30de409eb365c8fc56 270 Hamap MF_00228 Hydroxyethylthiazole kinase [thiM]. 12 261 32.625 T 13-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 COP00_14410 740865c4acbccd30de409eb365c8fc56 270 SUPERFAMILY SSF53613 8 264 9.82E-58 T 13-10-2018 IPR029056 Ribokinase-like COP00_14410 740865c4acbccd30de409eb365c8fc56 270 Gene3D G3DSA:3.40.1190.20 1 269 2.0E-99 T 13-10-2018 IPR029056 Ribokinase-like COP00_14410 740865c4acbccd30de409eb365c8fc56 270 PIRSF PIRSF000513 4 269 1.9E-95 T 13-10-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 COP00_20030 b30bd664024b425d13be910bdba0b8b0 316 Gene3D G3DSA:1.10.260.40 3 59 6.1E-21 T 13-10-2018 COP00_20030 b30bd664024b425d13be910bdba0b8b0 316 SUPERFAMILY SSF53822 71 315 1.3E-48 T 13-10-2018 IPR028082 Periplasmic binding protein-like I COP00_20030 b30bd664024b425d13be910bdba0b8b0 316 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 1.3E-19 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 COP00_20030 b30bd664024b425d13be910bdba0b8b0 316 SUPERFAMILY SSF47413 1 59 2.53E-17 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 COP00_20030 b30bd664024b425d13be910bdba0b8b0 316 Pfam PF13377 Periplasmic binding protein-like domain 158 315 4.0E-32 T 13-10-2018 COP00_20030 b30bd664024b425d13be910bdba0b8b0 316 Gene3D G3DSA:3.40.50.2300 71 307 4.6E-51 T 13-10-2018 COP00_20030 b30bd664024b425d13be910bdba0b8b0 316 SMART SM00354 1 71 1.2E-31 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 COP00_20030 b30bd664024b425d13be910bdba0b8b0 316 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 13-10-2018 COP00_20030 b30bd664024b425d13be910bdba0b8b0 316 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 2.2E-5 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 COP00_20030 b30bd664024b425d13be910bdba0b8b0 316 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 2.2E-5 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 COP00_20030 b30bd664024b425d13be910bdba0b8b0 316 Gene3D G3DSA:3.40.50.2300 149 312 4.6E-51 T 13-10-2018 COP00_11375 05de33860d15f241386842876ca7de3f 137 Gene3D G3DSA:1.20.1550.10 1 109 2.8E-8 T 13-10-2018 IPR023380 DsbB-like superfamily COP00_11375 05de33860d15f241386842876ca7de3f 137 Hamap MF_00287 Probable disulfide formation protein [bdbC]. 1 136 24.566 T 13-10-2018 IPR012187 Disulphide bond formation protein BdbC COP00_11375 05de33860d15f241386842876ca7de3f 137 PIRSF PIRSF036659 1 137 1.2E-59 T 13-10-2018 IPR012187 Disulphide bond formation protein BdbC COP00_11375 05de33860d15f241386842876ca7de3f 137 SUPERFAMILY SSF158442 9 131 4.05E-30 T 13-10-2018 IPR023380 DsbB-like superfamily COP00_11375 05de33860d15f241386842876ca7de3f 137 Pfam PF02600 Disulfide bond formation protein DsbB 11 130 1.2E-7 T 13-10-2018 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 COP00_05255 e1630350c3a2293924795cafb9fed90a 159 SUPERFAMILY SSF52833 1 158 2.16E-61 T 13-10-2018 IPR036249 Thioredoxin-like superfamily COP00_05255 e1630350c3a2293924795cafb9fed90a 159 Gene3D G3DSA:3.40.30.10 1 159 9.0E-69 T 13-10-2018 COP00_05255 e1630350c3a2293924795cafb9fed90a 159 ProSitePatterns PS00763 Glutathione peroxidases signature 2. 59 66 - T 13-10-2018 IPR029760 Glutathione peroxidase conserved site Reactome: R-HSA-3299685 COP00_05255 e1630350c3a2293924795cafb9fed90a 159 PIRSF PIRSF000303 1 159 3.7E-68 T 13-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 COP00_05255 e1630350c3a2293924795cafb9fed90a 159 Pfam PF00255 Glutathione peroxidase 3 109 1.0E-42 T 13-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 COP00_05255 e1630350c3a2293924795cafb9fed90a 159 PRINTS PR01011 Glutathione peroxidase family signature 21 38 2.9E-20 T 13-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 COP00_05255 e1630350c3a2293924795cafb9fed90a 159 PRINTS PR01011 Glutathione peroxidase family signature 56 72 2.9E-20 T 13-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 COP00_05255 e1630350c3a2293924795cafb9fed90a 159 PRINTS PR01011 Glutathione peroxidase family signature 122 131 2.9E-20 T 13-10-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 COP00_05255 e1630350c3a2293924795cafb9fed90a 159 ProSitePatterns PS00460 Glutathione peroxidases active site. 23 38 - T 13-10-2018 IPR029759 Glutathione peroxidase active site Reactome: R-HSA-3299685 COP00_14715 8dc37d612ab8397478faa02be4b7409c 340 Gene3D G3DSA:2.160.20.10 42 339 3.9E-113 T 13-10-2018 IPR012334 Pectin lyase fold COP00_14715 8dc37d612ab8397478faa02be4b7409c 340 SMART SM00656 57 277 3.7E-31 T 13-10-2018 IPR002022 Pectate lyase COP00_14715 8dc37d612ab8397478faa02be4b7409c 340 Pfam PF00544 Pectate lyase 103 271 2.2E-34 T 13-10-2018 IPR002022 Pectate lyase COP00_14715 8dc37d612ab8397478faa02be4b7409c 340 SUPERFAMILY SSF51126 44 338 3.29E-87 T 13-10-2018 IPR011050 Pectin lyase fold/virulence factor COP00_11625 c5fc056ad24fb1bf590489b40e759729 446 Pfam PF10651 Domain of unknown function (DUF2479) 5 146 1.4E-29 T 13-10-2018 IPR018913 Domain of unknown function DUF2479 COP00_12205 5eefe956c1d131838f414f660bd31c5d 332 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 33 325 2.3E-104 T 13-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 COP00_12205 5eefe956c1d131838f414f660bd31c5d 332 Gene3D G3DSA:3.40.718.10 1 332 2.7E-136 T 13-10-2018 COP00_12205 5eefe956c1d131838f414f660bd31c5d 332 SUPERFAMILY SSF53659 3 331 4.4E-105 T 13-10-2018 COP00_12205 5eefe956c1d131838f414f660bd31c5d 332 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 6 329 8.4E-107 T 13-10-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00750+1.1.1.262 COP00_08395 5e51f9bd74eb3bd8006bfd099cd844e3 180 Gene3D G3DSA:3.30.1340.20 74 180 3.9E-37 T 13-10-2018 IPR035922 3H domain superfamily COP00_08395 5e51f9bd74eb3bd8006bfd099cd844e3 180 PIRSF PIRSF037847 7 180 8.4E-70 T 13-10-2018 IPR026043 Transcription repressor NadR COP00_08395 5e51f9bd74eb3bd8006bfd099cd844e3 180 Gene3D G3DSA:1.10.10.10 2 67 3.0E-17 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_08395 5e51f9bd74eb3bd8006bfd099cd844e3 180 SUPERFAMILY SSF75500 75 179 1.96E-37 T 13-10-2018 IPR035922 3H domain superfamily COP00_08395 5e51f9bd74eb3bd8006bfd099cd844e3 180 ProDom PD469575 TRANSCRIPTION DNA-BINDING REGULATION TRANSCRIPTIONAL REGULATOR REPRESSOR FAMILY BIOTIN REGULATOR 3H 85 178 3.0E-46 T 13-10-2018 IPR004173 3H domain GO:0036094 COP00_08395 5e51f9bd74eb3bd8006bfd099cd844e3 180 Pfam PF08279 HTH domain 12 64 8.7E-15 T 13-10-2018 IPR013196 Helix-turn-helix, type 11 COP00_08395 5e51f9bd74eb3bd8006bfd099cd844e3 180 Pfam PF02829 3H domain 81 177 8.0E-35 T 13-10-2018 IPR004173 3H domain GO:0036094 COP00_08395 5e51f9bd74eb3bd8006bfd099cd844e3 180 SUPERFAMILY SSF46785 10 67 7.32E-10 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_18900 3b83aa4e7fe0aadda8e6644074f752f6 398 Gene3D G3DSA:3.40.50.2000 6 391 3.3E-122 T 13-10-2018 COP00_18900 3b83aa4e7fe0aadda8e6644074f752f6 398 TIGRFAM TIGR01426 MGT: glycosyltransferase, MGT family 7 394 4.6E-107 T 13-10-2018 IPR006326 UDP-glycosyltransferase, MGT GO:0016758|GO:0016999 COP00_18900 3b83aa4e7fe0aadda8e6644074f752f6 398 Pfam PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 229 371 2.1E-19 T 13-10-2018 IPR002213 UDP-glucuronosyl/UDP-glucosyltransferase GO:0016758 Reactome: R-HSA-156588 COP00_18900 3b83aa4e7fe0aadda8e6644074f752f6 398 Gene3D G3DSA:3.40.50.2000 217 380 3.3E-122 T 13-10-2018 COP00_18900 3b83aa4e7fe0aadda8e6644074f752f6 398 SUPERFAMILY SSF53756 1 391 9.42E-76 T 13-10-2018 COP00_19020 e4a52511227adb66d1a1a62bf0f3a24c 503 Pfam PF00271 Helicase conserved C-terminal domain 245 353 8.4E-29 T 13-10-2018 IPR001650 Helicase, C-terminal COP00_19020 e4a52511227adb66d1a1a62bf0f3a24c 503 SUPERFAMILY SSF52540 88 375 1.69E-76 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_19020 e4a52511227adb66d1a1a62bf0f3a24c 503 SMART SM00487 39 236 3.0E-66 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain COP00_19020 e4a52511227adb66d1a1a62bf0f3a24c 503 Pfam PF00270 DEAD/DEAH box helicase 44 209 8.9E-50 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 COP00_19020 e4a52511227adb66d1a1a62bf0f3a24c 503 SMART SM00490 272 353 7.0E-34 T 13-10-2018 IPR001650 Helicase, C-terminal COP00_19020 e4a52511227adb66d1a1a62bf0f3a24c 503 Gene3D G3DSA:3.40.50.300 10 225 3.5E-77 T 13-10-2018 COP00_19020 e4a52511227adb66d1a1a62bf0f3a24c 503 Hamap MF_01493 DEAD-box ATP-dependent RNA helicase CshA [cshA]. 20 503 45.682 T 13-10-2018 IPR030880 DEAD-box ATP-dependent RNA helicase CshA GO:0004004|GO:0005524|GO:0010501 COP00_19020 e4a52511227adb66d1a1a62bf0f3a24c 503 Gene3D G3DSA:3.40.50.300 228 464 3.8E-53 T 13-10-2018 COP00_19020 e4a52511227adb66d1a1a62bf0f3a24c 503 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 167 175 - T 13-10-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site COP00_06495 e11b13363a10c945173f14787294dffd 327 Pfam PF02779 Transketolase, pyrimidine binding domain 4 178 9.2E-53 T 13-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain COP00_06495 e11b13363a10c945173f14787294dffd 327 Gene3D G3DSA:3.40.50.920 193 327 2.3E-42 T 13-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 COP00_06495 e11b13363a10c945173f14787294dffd 327 Pfam PF02780 Transketolase, C-terminal domain 194 316 5.8E-41 T 13-10-2018 IPR033248 Transketolase, C-terminal domain COP00_06495 e11b13363a10c945173f14787294dffd 327 SUPERFAMILY SSF52518 2 204 4.52E-74 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold COP00_06495 e11b13363a10c945173f14787294dffd 327 Gene3D G3DSA:3.40.50.970 1 192 9.0E-93 T 13-10-2018 COP00_06495 e11b13363a10c945173f14787294dffd 327 SMART SM00861 4 179 9.3E-71 T 13-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain COP00_06495 e11b13363a10c945173f14787294dffd 327 SUPERFAMILY SSF52922 188 325 1.57E-39 T 13-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 COP00_17580 eb5238f50e7fb81e6a2a0c2b0d8e4f85 155 SUPERFAMILY SSF47413 5 62 1.5E-11 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 COP00_17580 eb5238f50e7fb81e6a2a0c2b0d8e4f85 155 SMART SM00530 13 68 3.1E-6 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 COP00_17580 eb5238f50e7fb81e6a2a0c2b0d8e4f85 155 Pfam PF01381 Helix-turn-helix 14 48 3.3E-7 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 COP00_17580 eb5238f50e7fb81e6a2a0c2b0d8e4f85 155 Gene3D G3DSA:1.10.260.40 6 87 2.2E-9 T 13-10-2018 COP00_16400 a00ddbf2cf1814ba197192dc5d00b0d1 476 PRINTS PR00095 Anthranilate synthase component I signature 395 409 7.7E-18 T 13-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 COP00_16400 a00ddbf2cf1814ba197192dc5d00b0d1 476 PRINTS PR00095 Anthranilate synthase component I signature 301 314 7.7E-18 T 13-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 COP00_16400 a00ddbf2cf1814ba197192dc5d00b0d1 476 PRINTS PR00095 Anthranilate synthase component I signature 315 328 7.7E-18 T 13-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 COP00_16400 a00ddbf2cf1814ba197192dc5d00b0d1 476 PRINTS PR00095 Anthranilate synthase component I signature 410 424 7.7E-18 T 13-10-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 COP00_16400 a00ddbf2cf1814ba197192dc5d00b0d1 476 Pfam PF04715 Anthranilate synthase component I, N terminal region 16 150 7.3E-26 T 13-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 COP00_16400 a00ddbf2cf1814ba197192dc5d00b0d1 476 SUPERFAMILY SSF56322 4 464 4.45E-145 T 13-10-2018 IPR005801 ADC synthase GO:0009058 COP00_16400 a00ddbf2cf1814ba197192dc5d00b0d1 476 Gene3D G3DSA:3.60.120.10 1 471 5.8E-159 T 13-10-2018 IPR005801 ADC synthase GO:0009058 COP00_16400 a00ddbf2cf1814ba197192dc5d00b0d1 476 Pfam PF00425 chorismate binding enzyme 201 453 6.9E-95 T 13-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal COP00_22315 0dc4a3201d4f1d693c3576f0210966e1 340 Gene3D G3DSA:1.10.3470.10 11 339 1.7E-99 T 13-10-2018 IPR037294 ABC transporter, BtuC-like COP00_22315 0dc4a3201d4f1d693c3576f0210966e1 340 SUPERFAMILY SSF81345 8 333 1.44E-84 T 13-10-2018 IPR037294 ABC transporter, BtuC-like COP00_22315 0dc4a3201d4f1d693c3576f0210966e1 340 Pfam PF01032 FecCD transport family 26 333 9.2E-95 T 13-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 COP00_12120 ef4613a87f9df28df9da10df308dcf21 208 Gene3D G3DSA:3.40.50.20 1 84 1.4E-13 T 13-10-2018 COP00_12120 ef4613a87f9df28df9da10df308dcf21 208 TIGRFAM TIGR03570 NeuD_NnaD: sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family 3 205 5.5E-62 T 13-10-2018 IPR020019 Sialic acid O-acyltransferase NeuD-like COP00_12120 ef4613a87f9df28df9da10df308dcf21 208 SUPERFAMILY SSF51161 2 208 1.19E-49 T 13-10-2018 IPR011004 Trimeric LpxA-like superfamily COP00_12120 ef4613a87f9df28df9da10df308dcf21 208 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 140 171 8.8E-4 T 13-10-2018 IPR001451 Hexapeptide repeat COP00_12120 ef4613a87f9df28df9da10df308dcf21 208 Gene3D G3DSA:2.160.10.10 85 208 3.8E-31 T 13-10-2018 COP00_09075 6a2cab9e3b1de17d07b123c3ad03d5a2 578 Gene3D G3DSA:3.30.450.20 223 348 6.8E-18 T 13-10-2018 COP00_09075 6a2cab9e3b1de17d07b123c3ad03d5a2 578 Pfam PF00512 His Kinase A (phospho-acceptor) domain 352 418 2.6E-21 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 COP00_09075 6a2cab9e3b1de17d07b123c3ad03d5a2 578 SUPERFAMILY SSF55785 227 344 1.92E-11 T 13-10-2018 IPR035965 PAS domain superfamily COP00_09075 6a2cab9e3b1de17d07b123c3ad03d5a2 578 SUPERFAMILY SSF55874 408 575 2.88E-50 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily COP00_09075 6a2cab9e3b1de17d07b123c3ad03d5a2 578 SMART SM00388 352 419 2.9E-24 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 COP00_09075 6a2cab9e3b1de17d07b123c3ad03d5a2 578 SMART SM00091 236 302 5.1E-5 T 13-10-2018 IPR000014 PAS domain COP00_09075 6a2cab9e3b1de17d07b123c3ad03d5a2 578 SUPERFAMILY SSF47384 338 420 1.26E-21 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 COP00_09075 6a2cab9e3b1de17d07b123c3ad03d5a2 578 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 465 575 1.6E-30 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase COP00_09075 6a2cab9e3b1de17d07b123c3ad03d5a2 578 Pfam PF00989 PAS fold 237 343 5.4E-10 T 13-10-2018 IPR013767 PAS fold GO:0006355 COP00_09075 6a2cab9e3b1de17d07b123c3ad03d5a2 578 Gene3D G3DSA:3.30.565.10 423 577 1.1E-49 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily COP00_09075 6a2cab9e3b1de17d07b123c3ad03d5a2 578 PRINTS PR00344 Bacterial sensor protein C-terminal signature 520 530 7.8E-19 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 COP00_09075 6a2cab9e3b1de17d07b123c3ad03d5a2 578 PRINTS PR00344 Bacterial sensor protein C-terminal signature 502 516 7.8E-19 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 COP00_09075 6a2cab9e3b1de17d07b123c3ad03d5a2 578 PRINTS PR00344 Bacterial sensor protein C-terminal signature 561 574 7.8E-19 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 COP00_09075 6a2cab9e3b1de17d07b123c3ad03d5a2 578 PRINTS PR00344 Bacterial sensor protein C-terminal signature 537 555 7.8E-19 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 COP00_09075 6a2cab9e3b1de17d07b123c3ad03d5a2 578 Pfam PF16736 Single Cache-like 34 145 9.9E-26 T 13-10-2018 IPR031967 PhoR, single Cache-like domain COP00_09075 6a2cab9e3b1de17d07b123c3ad03d5a2 578 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 234 352 3.0E-9 T 13-10-2018 IPR000014 PAS domain COP00_09075 6a2cab9e3b1de17d07b123c3ad03d5a2 578 SMART SM00387 465 577 1.9E-43 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase COP00_09075 6a2cab9e3b1de17d07b123c3ad03d5a2 578 Gene3D G3DSA:1.10.287.130 349 420 4.8E-27 T 13-10-2018 COP00_09075 6a2cab9e3b1de17d07b123c3ad03d5a2 578 Gene3D G3DSA:3.30.450.20 30 154 5.5E-10 T 13-10-2018 COP00_14905 05c0b50c0438682ac36559869a0071cd 146 Pfam PF02863 Arginine repressor, C-terminal domain 80 145 3.7E-23 T 13-10-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 COP00_14905 05c0b50c0438682ac36559869a0071cd 146 Gene3D G3DSA:3.30.1360.40 68 146 8.5E-25 T 13-10-2018 COP00_14905 05c0b50c0438682ac36559869a0071cd 146 Pfam PF01316 Arginine repressor, DNA binding domain 1 63 3.0E-18 T 13-10-2018 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 COP00_14905 05c0b50c0438682ac36559869a0071cd 146 Hamap MF_00173 Arginine repressor [argR]. 1 146 52.665 T 13-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 COP00_14905 05c0b50c0438682ac36559869a0071cd 146 SUPERFAMILY SSF55252 80 145 1.05E-19 T 13-10-2018 IPR036251 Arginine repressor, C-terminal domain superfamily GO:0034618|GO:0051259 COP00_14905 05c0b50c0438682ac36559869a0071cd 146 SUPERFAMILY SSF46785 3 76 1.02E-18 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_14905 05c0b50c0438682ac36559869a0071cd 146 ProDom PD007402 ARGININE REPRESSOR TRANSCRIPTION BIOSYNTHESIS DNA-BINDING REGULATION AMINO-ACID ARGR TRANSCRIPTIONAL FAMILY 92 127 7.0E-13 T 13-10-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 COP00_14905 05c0b50c0438682ac36559869a0071cd 146 PRINTS PR01467 Bacterial arginine repressor signature 21 34 6.4E-20 T 13-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 COP00_14905 05c0b50c0438682ac36559869a0071cd 146 PRINTS PR01467 Bacterial arginine repressor signature 37 52 6.4E-20 T 13-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 COP00_14905 05c0b50c0438682ac36559869a0071cd 146 PRINTS PR01467 Bacterial arginine repressor signature 118 133 6.4E-20 T 13-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 COP00_14905 05c0b50c0438682ac36559869a0071cd 146 PRINTS PR01467 Bacterial arginine repressor signature 88 101 6.4E-20 T 13-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 COP00_14905 05c0b50c0438682ac36559869a0071cd 146 Gene3D G3DSA:1.10.10.10 1 63 2.1E-21 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_14905 05c0b50c0438682ac36559869a0071cd 146 TIGRFAM TIGR01529 argR_whole: arginine repressor 5 145 1.0E-39 T 13-10-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 COP00_21100 80210d0884b05c33595f1eb1e3e94c57 37 Pfam PF14152 YfhE-like protein 3 34 2.4E-13 T 13-10-2018 IPR025437 YfhE-like protein COP00_17850 ec3001f392d1381d3b5f1d24ad3b46a1 694 Gene3D G3DSA:3.40.50.150 374 641 8.8E-21 T 13-10-2018 COP00_17850 ec3001f392d1381d3b5f1d24ad3b46a1 694 SUPERFAMILY SSF53335 396 641 2.52E-22 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase COP00_17850 ec3001f392d1381d3b5f1d24ad3b46a1 694 Pfam PF08242 Methyltransferase domain 438 548 6.5E-13 T 13-10-2018 IPR013217 Methyltransferase type 12 COP00_21140 e89358b10edbe4b76c0537ae4ccfc332 370 SUPERFAMILY SSF51905 2 366 2.72E-39 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily COP00_21140 e89358b10edbe4b76c0537ae4ccfc332 370 Pfam PF01266 FAD dependent oxidoreductase 3 349 1.9E-49 T 13-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 COP00_21140 e89358b10edbe4b76c0537ae4ccfc332 370 Gene3D G3DSA:3.50.50.60 4 349 1.0E-78 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily COP00_21140 e89358b10edbe4b76c0537ae4ccfc332 370 SUPERFAMILY SSF54373 220 309 1.44E-15 T 13-10-2018 COP00_21140 e89358b10edbe4b76c0537ae4ccfc332 370 Gene3D G3DSA:3.30.9.10 86 309 1.0E-78 T 13-10-2018 COP00_20965 a63cba0182d9e7bb7ffe24f2c3565e72 183 Gene3D G3DSA:3.40.50.880 1 183 1.5E-53 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like COP00_20965 a63cba0182d9e7bb7ffe24f2c3565e72 183 Pfam PF01965 DJ-1/PfpI family 3 165 1.5E-44 T 13-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 COP00_20965 a63cba0182d9e7bb7ffe24f2c3565e72 183 SUPERFAMILY SSF52317 1 182 3.85E-51 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like COP00_20965 a63cba0182d9e7bb7ffe24f2c3565e72 183 TIGRFAM TIGR01383 not_thiJ: DJ-1 family protein 4 179 2.9E-56 T 13-10-2018 IPR006287 Protein/nucleic acid deglycase DJ-1 Reactome: R-HSA-3899300 COP00_06670 68ee9d12bc346ec786f400bed3665786 185 TIGRFAM TIGR00038 efp: translation elongation factor P 2 185 1.8E-79 T 13-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 COP00_06670 68ee9d12bc346ec786f400bed3665786 185 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 3 60 7.3E-29 T 13-10-2018 IPR013185 Translation elongation factor, KOW-like COP00_06670 68ee9d12bc346ec786f400bed3665786 185 Pfam PF09285 Elongation factor P, C-terminal 129 184 2.5E-26 T 13-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 COP00_06670 68ee9d12bc346ec786f400bed3665786 185 SUPERFAMILY SSF50249 128 185 1.37E-18 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold COP00_06670 68ee9d12bc346ec786f400bed3665786 185 SMART SM01185 67 121 2.1E-23 T 13-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 COP00_06670 68ee9d12bc346ec786f400bed3665786 185 ProSitePatterns PS01275 Elongation factor P signature. 150 169 - T 13-10-2018 IPR013852 Translation elongation factor P/YeiP, conserved site COP00_06670 68ee9d12bc346ec786f400bed3665786 185 SMART SM00841 129 184 2.1E-33 T 13-10-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 COP00_06670 68ee9d12bc346ec786f400bed3665786 185 Pfam PF01132 Elongation factor P (EF-P) OB domain 68 119 1.0E-19 T 13-10-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 COP00_06670 68ee9d12bc346ec786f400bed3665786 185 Hamap MF_00141 Elongation factor P [efp]. 1 185 50.211 T 13-10-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 COP00_06670 68ee9d12bc346ec786f400bed3665786 185 Gene3D G3DSA:2.40.50.140 64 127 1.2E-24 T 13-10-2018 COP00_06670 68ee9d12bc346ec786f400bed3665786 185 SUPERFAMILY SSF50104 1 62 4.87E-22 T 13-10-2018 IPR008991 Translation protein SH3-like domain superfamily COP00_06670 68ee9d12bc346ec786f400bed3665786 185 SUPERFAMILY SSF50249 65 129 1.65E-19 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold COP00_06670 68ee9d12bc346ec786f400bed3665786 185 PIRSF PIRSF005901 1 185 9.4E-72 T 13-10-2018 IPR020599 Translation elongation factor P/YeiP COP00_06670 68ee9d12bc346ec786f400bed3665786 185 Gene3D G3DSA:2.40.50.140 128 185 7.7E-27 T 13-10-2018 COP00_06670 68ee9d12bc346ec786f400bed3665786 185 Gene3D G3DSA:2.30.30.30 1 62 9.1E-32 T 13-10-2018 IPR014722 Ribosomal protein L2, domain 2 COP00_18630 4d3eac5b6b9f30b46917dc273e1de56c 98 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 44 59 1.3E-13 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 COP00_18630 4d3eac5b6b9f30b46917dc273e1de56c 98 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 12 27 1.3E-13 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 COP00_18630 4d3eac5b6b9f30b46917dc273e1de56c 98 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 59 74 1.3E-13 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 COP00_18630 4d3eac5b6b9f30b46917dc273e1de56c 98 SMART SM00418 10 88 3.5E-19 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 COP00_18630 4d3eac5b6b9f30b46917dc273e1de56c 98 SUPERFAMILY SSF46785 5 87 4.54E-19 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_18630 4d3eac5b6b9f30b46917dc273e1de56c 98 Pfam PF01022 Bacterial regulatory protein, arsR family 17 62 4.5E-13 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 COP00_18630 4d3eac5b6b9f30b46917dc273e1de56c 98 Gene3D G3DSA:1.10.10.10 2 97 1.2E-21 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_16735 c26d0a1d5704f670b606850ad569f41d 103 ProSitePatterns PS01108 Ribosomal protein L24 signature. 6 23 - T 13-10-2018 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 COP00_16735 c26d0a1d5704f670b606850ad569f41d 103 Pfam PF00467 KOW motif 5 36 1.2E-9 T 13-10-2018 IPR005824 KOW COP00_16735 c26d0a1d5704f670b606850ad569f41d 103 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 1 95 23.201 T 13-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_16735 c26d0a1d5704f670b606850ad569f41d 103 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 1 100 2.1E-41 T 13-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_16735 c26d0a1d5704f670b606850ad569f41d 103 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 38 100 4.3E-30 T 13-10-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_16735 c26d0a1d5704f670b606850ad569f41d 103 Gene3D G3DSA:2.30.30.30 1 100 1.6E-42 T 13-10-2018 IPR014722 Ribosomal protein L2, domain 2 COP00_16735 c26d0a1d5704f670b606850ad569f41d 103 SMART SM00739 2 29 6.6E-7 T 13-10-2018 IPR005824 KOW COP00_16735 c26d0a1d5704f670b606850ad569f41d 103 SUPERFAMILY SSF50104 1 100 3.01E-39 T 13-10-2018 IPR008991 Translation protein SH3-like domain superfamily COP00_20140 52badeed88c26361db7d5fd57933d6f3 292 SUPERFAMILY SSF160240 213 288 8.5E-19 T 13-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 COP00_20140 52badeed88c26361db7d5fd57933d6f3 292 Gene3D G3DSA:1.20.1510.10 11 207 1.4E-57 T 13-10-2018 IPR027469 Cation efflux transmembrane domain superfamily COP00_20140 52badeed88c26361db7d5fd57933d6f3 292 Pfam PF01545 Cation efflux family 15 206 1.1E-52 T 13-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 COP00_20140 52badeed88c26361db7d5fd57933d6f3 292 Gene3D G3DSA:3.30.70.1350 211 288 9.8E-14 T 13-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 COP00_20140 52badeed88c26361db7d5fd57933d6f3 292 Pfam PF16916 Dimerisation domain of Zinc Transporter 215 286 1.6E-16 T 13-10-2018 IPR027470 Cation efflux protein, cytoplasmic domain COP00_20140 52badeed88c26361db7d5fd57933d6f3 292 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 11 287 8.4E-78 T 13-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 COP00_20140 52badeed88c26361db7d5fd57933d6f3 292 SUPERFAMILY SSF161111 8 208 2.62E-56 T 13-10-2018 IPR027469 Cation efflux transmembrane domain superfamily COP00_05040 46caadaf9b686f5ce44f1b6b2fcc2586 285 TIGRFAM TIGR03943 TIGR03943: TIGR03943 family protein 27 275 2.1E-54 T 13-10-2018 IPR015402 Protein of unknown function DUF1980 COP00_05040 46caadaf9b686f5ce44f1b6b2fcc2586 285 Pfam PF09323 Domain of unknown function (DUF1980) 8 187 2.7E-41 T 13-10-2018 IPR015402 Protein of unknown function DUF1980 COP00_01360 a7aaf4c4d2640d48d376386d652d9db8 338 Gene3D G3DSA:1.10.220.30 2 89 2.3E-20 T 13-10-2018 COP00_01360 a7aaf4c4d2640d48d376386d652d9db8 338 PIRSF PIRSF003161 3 338 1.2E-128 T 13-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 COP00_01360 a7aaf4c4d2640d48d376386d652d9db8 338 PRINTS PR00954 Flagellar motor switch protein FliG signature 276 302 1.3E-80 T 13-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 COP00_01360 a7aaf4c4d2640d48d376386d652d9db8 338 PRINTS PR00954 Flagellar motor switch protein FliG signature 230 250 1.3E-80 T 13-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 COP00_01360 a7aaf4c4d2640d48d376386d652d9db8 338 PRINTS PR00954 Flagellar motor switch protein FliG signature 9 25 1.3E-80 T 13-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 COP00_01360 a7aaf4c4d2640d48d376386d652d9db8 338 PRINTS PR00954 Flagellar motor switch protein FliG signature 252 272 1.3E-80 T 13-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 COP00_01360 a7aaf4c4d2640d48d376386d652d9db8 338 PRINTS PR00954 Flagellar motor switch protein FliG signature 38 64 1.3E-80 T 13-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 COP00_01360 a7aaf4c4d2640d48d376386d652d9db8 338 PRINTS PR00954 Flagellar motor switch protein FliG signature 118 141 1.3E-80 T 13-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 COP00_01360 a7aaf4c4d2640d48d376386d652d9db8 338 PRINTS PR00954 Flagellar motor switch protein FliG signature 199 224 1.3E-80 T 13-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 COP00_01360 a7aaf4c4d2640d48d376386d652d9db8 338 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 1 338 8.4E-160 T 13-10-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 COP00_01360 a7aaf4c4d2640d48d376386d652d9db8 338 Gene3D G3DSA:1.10.220.30 107 198 6.0E-34 T 13-10-2018 COP00_01360 a7aaf4c4d2640d48d376386d652d9db8 338 SUPERFAMILY SSF48029 10 103 1.27E-20 T 13-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical COP00_01360 a7aaf4c4d2640d48d376386d652d9db8 338 Gene3D G3DSA:1.10.220.30 199 338 5.3E-51 T 13-10-2018 COP00_01360 a7aaf4c4d2640d48d376386d652d9db8 338 Pfam PF14842 FliG N-terminal domain 8 111 1.1E-36 T 13-10-2018 IPR028263 Flagellar motor switch protein FliG, N-terminal domain COP00_01360 a7aaf4c4d2640d48d376386d652d9db8 338 Pfam PF01706 FliG C-terminal domain 222 328 1.3E-43 T 13-10-2018 IPR023087 Flagellar motor switch protein FliG, C-terminal COP00_01360 a7aaf4c4d2640d48d376386d652d9db8 338 Pfam PF14841 FliG middle domain 119 193 1.8E-30 T 13-10-2018 IPR032779 Flagellar motor switch protein FliG, middle domain COP00_01360 a7aaf4c4d2640d48d376386d652d9db8 338 SUPERFAMILY SSF48029 118 329 3.01E-70 T 13-10-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical COP00_23075 ff35c3bd9487f51e6b40df6a1adec4df 130 Pfam PF04138 GtrA-like protein 10 123 2.3E-28 T 13-10-2018 IPR007267 GtrA-like protein GO:0000271|GO:0016021 COP00_06200 57cedf611497abe84760b9a3a9a8386c 99 SUPERFAMILY SSF47789 43 97 3.79E-11 T 13-10-2018 COP00_06200 57cedf611497abe84760b9a3a9a8386c 99 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 43 90 9.3E-6 T 13-10-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 COP00_06200 57cedf611497abe84760b9a3a9a8386c 99 Gene3D G3DSA:1.10.150.20 40 97 5.7E-13 T 13-10-2018 COP00_13585 fb212dc655faadd547ee265b6d728e09 190 Pfam PF01569 PAP2 superfamily 54 163 5.3E-16 T 13-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase COP00_13585 fb212dc655faadd547ee265b6d728e09 190 SUPERFAMILY SSF48317 2 172 2.09E-36 T 13-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily COP00_13585 fb212dc655faadd547ee265b6d728e09 190 SMART SM00014 53 160 3.8E-24 T 13-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase COP00_13585 fb212dc655faadd547ee265b6d728e09 190 Gene3D G3DSA:1.20.144.10 81 174 6.5E-15 T 13-10-2018 COP00_22175 4b289e9c85f03f4b65d3bfd30e3f29d2 246 SUPERFAMILY SSF52540 3 229 8.63E-56 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_22175 4b289e9c85f03f4b65d3bfd30e3f29d2 246 Gene3D G3DSA:3.40.50.300 1 245 2.3E-62 T 13-10-2018 COP00_22175 4b289e9c85f03f4b65d3bfd30e3f29d2 246 SMART SM00382 28 213 7.1E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_22175 4b289e9c85f03f4b65d3bfd30e3f29d2 246 Pfam PF00005 ABC transporter 19 162 1.3E-27 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 COP00_18950 59b541428043a2f962a992fa32e89740 424 PRINTS PR00173 Glutamate-aspartate symporter signature 292 318 8.4E-36 T 13-10-2018 COP00_18950 59b541428043a2f962a992fa32e89740 424 PRINTS PR00173 Glutamate-aspartate symporter signature 4 24 8.4E-36 T 13-10-2018 COP00_18950 59b541428043a2f962a992fa32e89740 424 PRINTS PR00173 Glutamate-aspartate symporter signature 145 167 8.4E-36 T 13-10-2018 COP00_18950 59b541428043a2f962a992fa32e89740 424 PRINTS PR00173 Glutamate-aspartate symporter signature 75 100 8.4E-36 T 13-10-2018 COP00_18950 59b541428043a2f962a992fa32e89740 424 PRINTS PR00173 Glutamate-aspartate symporter signature 45 65 8.4E-36 T 13-10-2018 COP00_18950 59b541428043a2f962a992fa32e89740 424 PRINTS PR00173 Glutamate-aspartate symporter signature 192 211 8.4E-36 T 13-10-2018 COP00_18950 59b541428043a2f962a992fa32e89740 424 PRINTS PR00173 Glutamate-aspartate symporter signature 327 346 8.4E-36 T 13-10-2018 COP00_18950 59b541428043a2f962a992fa32e89740 424 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 295 318 - T 13-10-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site COP00_18950 59b541428043a2f962a992fa32e89740 424 Pfam PF00375 Sodium:dicarboxylate symporter family 10 400 1.9E-117 T 13-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 COP00_18950 59b541428043a2f962a992fa32e89740 424 SUPERFAMILY SSF118215 10 402 1.96E-122 T 13-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 COP00_18950 59b541428043a2f962a992fa32e89740 424 ProSitePatterns PS00713 Sodium:dicarboxylate symporter family signature 1. 37 52 - T 13-10-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site COP00_18950 59b541428043a2f962a992fa32e89740 424 Gene3D G3DSA:1.10.3860.10 3 420 1.3E-129 T 13-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 COP00_07385 13a71f15e2698cb6ccfb362dff9b4cc8 273 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 220 242 - T 13-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 COP00_07385 13a71f15e2698cb6ccfb362dff9b4cc8 273 Gene3D G3DSA:3.40.50.720 1 161 2.2E-29 T 13-10-2018 COP00_07385 13a71f15e2698cb6ccfb362dff9b4cc8 273 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 164 260 2.3E-15 T 13-10-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 COP00_07385 13a71f15e2698cb6ccfb362dff9b4cc8 273 SUPERFAMILY SSF48179 161 262 1.43E-16 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 COP00_07385 13a71f15e2698cb6ccfb362dff9b4cc8 273 PIRSF PIRSF000193 1 265 5.3E-68 T 13-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 COP00_07385 13a71f15e2698cb6ccfb362dff9b4cc8 273 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 3 97 1.4E-16 T 13-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal COP00_07385 13a71f15e2698cb6ccfb362dff9b4cc8 273 Gene3D G3DSA:1.10.3730.10 162 262 2.6E-13 T 13-10-2018 COP00_07385 13a71f15e2698cb6ccfb362dff9b4cc8 273 SUPERFAMILY SSF51735 2 155 3.31E-22 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily COP00_07305 320dfe4f46557c01fa9ff96aec2e515b 311 SUPERFAMILY SSF53335 94 310 7.02E-46 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase COP00_07305 320dfe4f46557c01fa9ff96aec2e515b 311 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 2 311 2.4E-108 T 13-10-2018 COP00_07305 320dfe4f46557c01fa9ff96aec2e515b 311 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 3 305 1.2E-110 T 13-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 COP00_07305 320dfe4f46557c01fa9ff96aec2e515b 311 Gene3D G3DSA:3.40.50.150 116 311 1.4E-61 T 13-10-2018 COP00_07305 320dfe4f46557c01fa9ff96aec2e515b 311 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 3 311 36.215 T 13-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 COP00_07305 320dfe4f46557c01fa9ff96aec2e515b 311 PIRSF PIRSF000401 1 311 4.2E-109 T 13-10-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 COP00_07960 318dd4ce389f7156f13ddf4db51f8b1c 168 SUPERFAMILY SSF53155 18 86 4.32E-7 T 13-10-2018 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily GO:0003908|GO:0006281 Reactome: R-HSA-5657655 COP00_07960 318dd4ce389f7156f13ddf4db51f8b1c 168 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 84 163 4.7E-32 T 13-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 COP00_07960 318dd4ce389f7156f13ddf4db51f8b1c 168 Hamap MF_00772 Methylated-DNA--protein-cysteine methyltransferase [ogt]. 19 163 35.224 T 13-10-2018 IPR023546 Methylated-DNA--protein-cysteine methyltransferase GO:0003824|GO:0006281 COP00_07960 318dd4ce389f7156f13ddf4db51f8b1c 168 Gene3D G3DSA:1.10.10.10 82 166 1.1E-35 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_07960 318dd4ce389f7156f13ddf4db51f8b1c 168 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 83 162 1.5E-36 T 13-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 COP00_07960 318dd4ce389f7156f13ddf4db51f8b1c 168 SUPERFAMILY SSF46767 82 163 1.11E-31 T 13-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 COP00_07960 318dd4ce389f7156f13ddf4db51f8b1c 168 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 133 139 - T 13-10-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 COP00_22390 67e4ac83fd17fae5b9c215eb3a91e5d3 308 SUPERFAMILY SSF160964 28 63 4.18E-5 T 13-10-2018 COP00_22390 67e4ac83fd17fae5b9c215eb3a91e5d3 308 SUPERFAMILY SSF161098 71 294 5.76E-60 T 13-10-2018 IPR035906 MetI-like superfamily COP00_22390 67e4ac83fd17fae5b9c215eb3a91e5d3 308 Gene3D G3DSA:1.10.3720.10 65 306 3.9E-67 T 13-10-2018 IPR035906 MetI-like superfamily COP00_22390 67e4ac83fd17fae5b9c215eb3a91e5d3 308 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 100 300 1.8E-21 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 COP00_22825 0fe5495fd5a6e2ebb0c13c2314b412b2 304 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 118 301 8.8E-29 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 COP00_22825 0fe5495fd5a6e2ebb0c13c2314b412b2 304 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 26 77 1.2E-14 T 13-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain COP00_22825 0fe5495fd5a6e2ebb0c13c2314b412b2 304 Gene3D G3DSA:1.10.3720.10 90 299 1.4E-19 T 13-10-2018 IPR035906 MetI-like superfamily COP00_22825 0fe5495fd5a6e2ebb0c13c2314b412b2 304 SUPERFAMILY SSF161098 95 288 3.53E-26 T 13-10-2018 IPR035906 MetI-like superfamily COP00_11535 3d026a45cceaa5011da34cab0768dd0a 211 Gene3D G3DSA:3.40.50.360 1 211 9.1E-64 T 13-10-2018 IPR029039 Flavoprotein-like superfamily COP00_11535 3d026a45cceaa5011da34cab0768dd0a 211 SUPERFAMILY SSF52218 1 210 1.86E-53 T 13-10-2018 IPR029039 Flavoprotein-like superfamily COP00_11535 3d026a45cceaa5011da34cab0768dd0a 211 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 2 211 28.735 T 13-10-2018 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 COP00_11535 3d026a45cceaa5011da34cab0768dd0a 211 Pfam PF02525 Flavodoxin-like fold 3 204 1.9E-46 T 13-10-2018 IPR003680 Flavodoxin-like fold COP00_20430 4a5dbcfaf5742fa36f3636f18084cb25 247 SUPERFAMILY SSF51735 4 246 4.14E-86 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily COP00_20430 4a5dbcfaf5742fa36f3636f18084cb25 247 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 11 243 1.8E-68 T 13-10-2018 COP00_20430 4a5dbcfaf5742fa36f3636f18084cb25 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 6.4E-14 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_20430 4a5dbcfaf5742fa36f3636f18084cb25 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 6.4E-14 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_20430 4a5dbcfaf5742fa36f3636f18084cb25 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 6.4E-14 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_20430 4a5dbcfaf5742fa36f3636f18084cb25 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 208 228 2.3E-46 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_20430 4a5dbcfaf5742fa36f3636f18084cb25 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 2.3E-46 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_20430 4a5dbcfaf5742fa36f3636f18084cb25 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 2.3E-46 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_20430 4a5dbcfaf5742fa36f3636f18084cb25 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 2.3E-46 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_20430 4a5dbcfaf5742fa36f3636f18084cb25 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 2.3E-46 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_20430 4a5dbcfaf5742fa36f3636f18084cb25 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 2.3E-46 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_20430 4a5dbcfaf5742fa36f3636f18084cb25 247 Gene3D G3DSA:3.40.50.720 1 246 4.2E-86 T 13-10-2018 COP00_10400 d7d858efd80227a372f1eb9cb9875fee 235 SMART SM00448 2 115 8.2E-31 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 COP00_10400 d7d858efd80227a372f1eb9cb9875fee 235 Gene3D G3DSA:3.40.50.12740 2 207 4.3E-33 T 13-10-2018 COP00_10400 d7d858efd80227a372f1eb9cb9875fee 235 Pfam PF00072 Response regulator receiver domain 4 115 1.1E-27 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 COP00_10400 d7d858efd80227a372f1eb9cb9875fee 235 PIRSF PIRSF006171 1 227 2.3E-83 T 13-10-2018 IPR024187 Signal transduction response regulator, citrate/malate metabolism GO:0000160|GO:0003700 COP00_10400 d7d858efd80227a372f1eb9cb9875fee 235 SUPERFAMILY SSF52172 1 139 4.13E-37 T 13-10-2018 IPR011006 CheY-like superfamily COP00_05785 63cd844c39ff0cf2e1eb5fd783725e1d 318 Pfam PF07486 Cell Wall Hydrolase 219 317 5.7E-26 T 13-10-2018 IPR011105 Cell wall hydrolase, SleB GO:0016787 COP00_05785 63cd844c39ff0cf2e1eb5fd783725e1d 318 Gene3D G3DSA:1.10.10.2520 203 282 9.2E-31 T 13-10-2018 COP00_05785 63cd844c39ff0cf2e1eb5fd783725e1d 318 SUPERFAMILY SSF47090 34 101 1.04E-19 T 13-10-2018 IPR036365 PGBD-like superfamily COP00_05785 63cd844c39ff0cf2e1eb5fd783725e1d 318 TIGRFAM TIGR02869 spore_SleB: spore cortex-lytic enzyme 31 317 1.1E-92 T 13-10-2018 IPR014224 Spore cortex-lytic enzyme SleB GO:0003824|GO:0009847 COP00_05785 63cd844c39ff0cf2e1eb5fd783725e1d 318 Pfam PF01471 Putative peptidoglycan binding domain 42 98 2.6E-16 T 13-10-2018 IPR002477 Peptidoglycan binding-like COP00_05785 63cd844c39ff0cf2e1eb5fd783725e1d 318 Gene3D G3DSA:2.40.10.420 283 318 3.1E-21 T 13-10-2018 COP00_05785 63cd844c39ff0cf2e1eb5fd783725e1d 318 Gene3D G3DSA:1.10.101.10 27 109 1.3E-21 T 13-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 COP00_16845 aa7f0f16944973917a1fbff6fb5874c0 247 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 1 245 37.265 T 13-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 COP00_16845 aa7f0f16944973917a1fbff6fb5874c0 247 Gene3D G3DSA:3.30.70.660 107 243 5.4E-51 T 13-10-2018 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0003723|GO:0009982 COP00_16845 aa7f0f16944973917a1fbff6fb5874c0 247 Gene3D G3DSA:3.30.70.580 1 106 1.3E-34 T 13-10-2018 COP00_16845 aa7f0f16944973917a1fbff6fb5874c0 247 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 3 240 3.0E-77 T 13-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 COP00_16845 aa7f0f16944973917a1fbff6fb5874c0 247 PIRSF PIRSF001430 1 247 1.8E-85 T 13-10-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 COP00_16845 aa7f0f16944973917a1fbff6fb5874c0 247 SUPERFAMILY SSF55120 1 247 4.46E-88 T 13-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 COP00_16845 aa7f0f16944973917a1fbff6fb5874c0 247 Pfam PF01416 tRNA pseudouridine synthase 144 246 1.9E-36 T 13-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 COP00_16845 aa7f0f16944973917a1fbff6fb5874c0 247 Pfam PF01416 tRNA pseudouridine synthase 8 104 1.5E-9 T 13-10-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 COP00_23965 87ba84abbc13b8c28cf9388636703674 137 Pfam PF02566 OsmC-like protein 40 134 4.5E-20 T 13-10-2018 IPR003718 OsmC/Ohr family COP00_23965 87ba84abbc13b8c28cf9388636703674 137 Gene3D G3DSA:3.30.300.20 44 137 5.6E-35 T 13-10-2018 IPR015946 K homology domain-like, alpha/beta COP00_23965 87ba84abbc13b8c28cf9388636703674 137 Gene3D G3DSA:2.20.25.10 2 43 2.4E-22 T 13-10-2018 COP00_23965 87ba84abbc13b8c28cf9388636703674 137 SUPERFAMILY SSF82784 1 136 4.45E-42 T 13-10-2018 IPR036102 OsmC/Ohr superfamily COP00_23965 87ba84abbc13b8c28cf9388636703674 137 TIGRFAM TIGR03561 organ_hyd_perox: peroxiredoxin, Ohr subfamily 4 136 2.1E-53 T 13-10-2018 IPR019953 Organic hydroperoxide resistance protein famiy GO:0006979 COP00_01790 20248c692007761e3e406a466bccc0d0 243 Pfam PF00722 Glycosyl hydrolases family 16 57 238 4.6E-44 T 13-10-2018 IPR000757 Glycoside hydrolase family 16 GO:0004553|GO:0005975 COP00_01790 20248c692007761e3e406a466bccc0d0 243 ProSitePatterns PS01034 Glycosyl hydrolases family 16 active sites. 134 144 - T 13-10-2018 IPR008263 Glycoside hydrolase, family 16, active site GO:0004553|GO:0005975 COP00_01790 20248c692007761e3e406a466bccc0d0 243 SUPERFAMILY SSF49899 34 242 1.78E-59 T 13-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily COP00_01790 20248c692007761e3e406a466bccc0d0 243 Gene3D G3DSA:2.60.120.200 21 112 9.2E-20 T 13-10-2018 COP00_01790 20248c692007761e3e406a466bccc0d0 243 Gene3D G3DSA:2.60.120.200 114 243 4.7E-50 T 13-10-2018 COP00_01790 20248c692007761e3e406a466bccc0d0 243 PRINTS PR00737 Glycosyl hydrolase family 16 signature 205 227 2.5E-79 T 13-10-2018 IPR008264 Beta-glucanase GO:0004553|GO:0005975 COP00_01790 20248c692007761e3e406a466bccc0d0 243 PRINTS PR00737 Glycosyl hydrolase family 16 signature 165 182 2.5E-79 T 13-10-2018 IPR008264 Beta-glucanase GO:0004553|GO:0005975 COP00_01790 20248c692007761e3e406a466bccc0d0 243 PRINTS PR00737 Glycosyl hydrolase family 16 signature 131 146 2.5E-79 T 13-10-2018 IPR008264 Beta-glucanase GO:0004553|GO:0005975 COP00_01790 20248c692007761e3e406a466bccc0d0 243 PRINTS PR00737 Glycosyl hydrolase family 16 signature 91 109 2.5E-79 T 13-10-2018 IPR008264 Beta-glucanase GO:0004553|GO:0005975 COP00_01790 20248c692007761e3e406a466bccc0d0 243 PRINTS PR00737 Glycosyl hydrolase family 16 signature 185 202 2.5E-79 T 13-10-2018 IPR008264 Beta-glucanase GO:0004553|GO:0005975 COP00_01790 20248c692007761e3e406a466bccc0d0 243 PRINTS PR00737 Glycosyl hydrolase family 16 signature 110 126 2.5E-79 T 13-10-2018 IPR008264 Beta-glucanase GO:0004553|GO:0005975 COP00_01790 20248c692007761e3e406a466bccc0d0 243 PRINTS PR00737 Glycosyl hydrolase family 16 signature 147 160 2.5E-79 T 13-10-2018 IPR008264 Beta-glucanase GO:0004553|GO:0005975 COP00_01790 20248c692007761e3e406a466bccc0d0 243 PRINTS PR00737 Glycosyl hydrolase family 16 signature 229 241 2.5E-79 T 13-10-2018 IPR008264 Beta-glucanase GO:0004553|GO:0005975 COP00_06815 0f95054e7cc2e2e8ae8f0916f330be57 279 Gene3D G3DSA:3.30.750.24 150 265 3.1E-33 T 13-10-2018 IPR036513 STAS domain superfamily COP00_06815 0f95054e7cc2e2e8ae8f0916f330be57 279 Pfam PF01740 STAS domain 157 255 2.8E-14 T 13-10-2018 IPR002645 STAS domain COP00_06815 0f95054e7cc2e2e8ae8f0916f330be57 279 SUPERFAMILY SSF52091 151 258 1.02E-15 T 13-10-2018 IPR036513 STAS domain superfamily COP00_13940 f4477ed6c957465fe981d75edaa31506 564 Pfam PF00390 Malic enzyme, N-terminal domain 79 260 1.0E-73 T 13-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 COP00_13940 f4477ed6c957465fe981d75edaa31506 564 Pfam PF03949 Malic enzyme, NAD binding domain 271 531 3.1E-105 T 13-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 COP00_13940 f4477ed6c957465fe981d75edaa31506 564 Gene3D G3DSA:3.40.50.720 269 563 6.0E-112 T 13-10-2018 COP00_13940 f4477ed6c957465fe981d75edaa31506 564 SUPERFAMILY SSF53223 4 270 3.6E-104 T 13-10-2018 COP00_13940 f4477ed6c957465fe981d75edaa31506 564 SMART SM01274 79 261 1.6E-97 T 13-10-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 COP00_13940 f4477ed6c957465fe981d75edaa31506 564 SUPERFAMILY SSF51735 271 560 1.22E-94 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily COP00_13940 f4477ed6c957465fe981d75edaa31506 564 PIRSF PIRSF000106 1 562 2.4E-230 T 13-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 COP00_13940 f4477ed6c957465fe981d75edaa31506 564 PRINTS PR00072 Malic enzyme signature 183 205 4.2E-72 T 13-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 COP00_13940 f4477ed6c957465fe981d75edaa31506 564 PRINTS PR00072 Malic enzyme signature 85 109 4.2E-72 T 13-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 COP00_13940 f4477ed6c957465fe981d75edaa31506 564 PRINTS PR00072 Malic enzyme signature 147 176 4.2E-72 T 13-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 COP00_13940 f4477ed6c957465fe981d75edaa31506 564 PRINTS PR00072 Malic enzyme signature 267 283 4.2E-72 T 13-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 COP00_13940 f4477ed6c957465fe981d75edaa31506 564 PRINTS PR00072 Malic enzyme signature 298 314 4.2E-72 T 13-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 COP00_13940 f4477ed6c957465fe981d75edaa31506 564 PRINTS PR00072 Malic enzyme signature 409 425 4.2E-72 T 13-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 COP00_13940 f4477ed6c957465fe981d75edaa31506 564 PRINTS PR00072 Malic enzyme signature 242 260 4.2E-72 T 13-10-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 COP00_13940 f4477ed6c957465fe981d75edaa31506 564 SMART SM00919 271 531 3.2E-125 T 13-10-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 COP00_13940 f4477ed6c957465fe981d75edaa31506 564 ProSitePatterns PS00331 Malic enzymes signature. 267 283 - T 13-10-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 COP00_13940 f4477ed6c957465fe981d75edaa31506 564 Gene3D G3DSA:3.40.50.10380 13 268 1.6E-104 T 13-10-2018 IPR037062 Malic enzyme, N-terminal domain superfamily GO:0004471|GO:0055114 COP00_08230 645dd4cf055226aad5f9b7076d447425 54 Pfam PF17449 Uncharacterized protein YrzK 1 53 7.2E-29 T 13-10-2018 IPR035378 Uncharacterized protein YrzK COP00_08230 645dd4cf055226aad5f9b7076d447425 54 ProDom PD051845 YRZK 7 53 1.0E-16 T 13-10-2018 IPR035378 Uncharacterized protein YrzK COP00_01290 a07250a3fa5d70c0f2a047178bbe82be 92 Gene3D G3DSA:3.40.1690.10 6 90 5.9E-27 T 13-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal COP00_01290 a07250a3fa5d70c0f2a047178bbe82be 92 Pfam PF01312 FlhB HrpN YscU SpaS Family 9 81 3.0E-20 T 13-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 COP00_01290 a07250a3fa5d70c0f2a047178bbe82be 92 TIGRFAM TIGR00789 flhB_rel: FlhB domain protein 7 87 3.4E-37 T 13-10-2018 IPR004683 Type III secretion system substrate exporter FlhB-like COP00_01290 a07250a3fa5d70c0f2a047178bbe82be 92 SUPERFAMILY SSF160544 8 85 1.14E-24 T 13-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal COP00_12520 46d31bb4b04dabeee5bb8cb45a0cb6f9 196 Gene3D G3DSA:2.40.40.10 41 186 3.3E-6 T 13-10-2018 IPR036908 RlpA-like domain superfamily COP00_12520 46d31bb4b04dabeee5bb8cb45a0cb6f9 196 SUPERFAMILY SSF50685 129 180 2.55E-6 T 13-10-2018 IPR036908 RlpA-like domain superfamily COP00_12520 46d31bb4b04dabeee5bb8cb45a0cb6f9 196 Pfam PF06725 3D domain 131 194 3.7E-11 T 13-10-2018 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 COP00_10250 c3c9477a305aefb188d7358c0f604195 661 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 428 612 2.2E-57 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 COP00_10250 c3c9477a305aefb188d7358c0f604195 661 SUPERFAMILY SSF103190 124 193 1.02E-10 T 13-10-2018 IPR029151 Periplasmic sensor-like domain superfamily COP00_10250 c3c9477a305aefb188d7358c0f604195 661 Pfam PF02743 Cache domain 43 264 7.9E-22 T 13-10-2018 IPR033479 Double Cache domain 1 COP00_10250 c3c9477a305aefb188d7358c0f604195 661 SMART SM00304 303 355 3.8E-18 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 COP00_10250 c3c9477a305aefb188d7358c0f604195 661 SMART SM00283 384 659 2.6E-90 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 COP00_10250 c3c9477a305aefb188d7358c0f604195 661 SMART SM00319 33 151 3.9E-20 T 13-10-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 COP00_10250 c3c9477a305aefb188d7358c0f604195 661 SUPERFAMILY SSF58104 323 659 2.75E-75 T 13-10-2018 COP00_10250 c3c9477a305aefb188d7358c0f604195 661 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 405 434 2.6E-23 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 COP00_10250 c3c9477a305aefb188d7358c0f604195 661 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 511 540 2.6E-23 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 COP00_10250 c3c9477a305aefb188d7358c0f604195 661 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 482 509 2.6E-23 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 COP00_10250 c3c9477a305aefb188d7358c0f604195 661 Pfam PF00672 HAMP domain 303 351 1.4E-15 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 COP00_10250 c3c9477a305aefb188d7358c0f604195 661 Gene3D G3DSA:1.10.8.500 302 354 1.9E-9 T 13-10-2018 COP00_10250 c3c9477a305aefb188d7358c0f604195 661 Gene3D G3DSA:1.10.287.950 355 659 2.0E-72 T 13-10-2018 COP00_10250 c3c9477a305aefb188d7358c0f604195 661 Gene3D G3DSA:3.30.450.20 60 272 1.5E-29 T 13-10-2018 COP00_10250 c3c9477a305aefb188d7358c0f604195 661 Gene3D G3DSA:3.30.450.20 72 183 1.5E-29 T 13-10-2018 COP00_21935 30013749b7dd7743fecb8f7e05a2de45 453 Pfam PF03553 Na+/H+ antiporter family 159 450 1.6E-62 T 13-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 COP00_21935 30013749b7dd7743fecb8f7e05a2de45 453 TIGRFAM TIGR00931 antiport_nhaC: Na+/H+ antiporter NhaC 15 450 1.3E-139 T 13-10-2018 IPR004770 Na+/H+ antiporter NhaC GO:0015297|GO:0016021 COP00_20190 e117a07c1cac6afd2b567b45703283f8 380 SUPERFAMILY SSF51246 310 370 4.79E-13 T 13-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 COP00_20190 e117a07c1cac6afd2b567b45703283f8 380 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 11 365 1.0E-138 T 13-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 COP00_20190 e117a07c1cac6afd2b567b45703283f8 380 Gene3D G3DSA:3.30.470.20 186 372 1.3E-72 T 13-10-2018 COP00_20190 e117a07c1cac6afd2b567b45703283f8 380 Pfam PF02222 ATP-grasp domain 116 285 6.1E-60 T 13-10-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type COP00_20190 e117a07c1cac6afd2b567b45703283f8 380 Gene3D G3DSA:3.40.50.20 2 116 1.5E-45 T 13-10-2018 COP00_20190 e117a07c1cac6afd2b567b45703283f8 380 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 9 76 4.9E-6 T 13-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 COP00_20190 e117a07c1cac6afd2b567b45703283f8 380 Gene3D G3DSA:3.30.1490.20 117 185 5.3E-25 T 13-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 COP00_20190 e117a07c1cac6afd2b567b45703283f8 380 SUPERFAMILY SSF52440 6 93 6.19E-27 T 13-10-2018 IPR016185 Pre-ATP-grasp domain superfamily COP00_20190 e117a07c1cac6afd2b567b45703283f8 380 SUPERFAMILY SSF56059 107 305 8.37E-64 T 13-10-2018 COP00_20190 e117a07c1cac6afd2b567b45703283f8 380 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 11 360 42.836 T 13-10-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 COP00_07610 7abb96e10459fc83686cb476f2d97b21 470 Gene3D G3DSA:3.40.250.10 371 470 4.2E-24 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily COP00_07610 7abb96e10459fc83686cb476f2d97b21 470 SUPERFAMILY SSF56281 4 260 2.66E-53 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like COP00_07610 7abb96e10459fc83686cb476f2d97b21 470 SMART SM00849 12 196 1.2E-24 T 13-10-2018 IPR001279 Metallo-beta-lactamase COP00_07610 7abb96e10459fc83686cb476f2d97b21 470 Pfam PF00581 Rhodanese-like domain 378 464 1.6E-12 T 13-10-2018 IPR001763 Rhodanese-like domain COP00_07610 7abb96e10459fc83686cb476f2d97b21 470 Pfam PF00581 Rhodanese-like domain 274 350 1.3E-6 T 13-10-2018 IPR001763 Rhodanese-like domain COP00_07610 7abb96e10459fc83686cb476f2d97b21 470 SUPERFAMILY SSF52821 364 469 1.1E-26 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily COP00_07610 7abb96e10459fc83686cb476f2d97b21 470 SMART SM00450 372 468 1.2E-12 T 13-10-2018 IPR001763 Rhodanese-like domain COP00_07610 7abb96e10459fc83686cb476f2d97b21 470 SMART SM00450 269 365 0.039 T 13-10-2018 IPR001763 Rhodanese-like domain COP00_07610 7abb96e10459fc83686cb476f2d97b21 470 SUPERFAMILY SSF52821 236 353 4.98E-16 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily COP00_07610 7abb96e10459fc83686cb476f2d97b21 470 Pfam PF00753 Metallo-beta-lactamase superfamily 13 180 5.6E-12 T 13-10-2018 IPR001279 Metallo-beta-lactamase COP00_07610 7abb96e10459fc83686cb476f2d97b21 470 Gene3D G3DSA:3.40.250.10 266 363 3.1E-22 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily COP00_07610 7abb96e10459fc83686cb476f2d97b21 470 Gene3D G3DSA:3.60.15.10 1 259 1.4E-87 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like COP00_01105 026f46da417e9af93839efca3962b7ce 405 Pfam PF02441 Flavoprotein 6 176 4.8E-46 T 13-10-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 COP00_01105 026f46da417e9af93839efca3962b7ce 405 SUPERFAMILY SSF52507 1 179 3.14E-62 T 13-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 COP00_01105 026f46da417e9af93839efca3962b7ce 405 SUPERFAMILY SSF102645 186 396 3.79E-75 T 13-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 COP00_01105 026f46da417e9af93839efca3962b7ce 405 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 187 369 2.2E-74 T 13-10-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 COP00_01105 026f46da417e9af93839efca3962b7ce 405 Gene3D G3DSA:3.40.50.10300 185 401 2.0E-85 T 13-10-2018 IPR035929 CoaB-like superfamily KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 COP00_01105 026f46da417e9af93839efca3962b7ce 405 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 2 392 3.3E-159 T 13-10-2018 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|MetaCyc: PWY-7851 COP00_01105 026f46da417e9af93839efca3962b7ce 405 Gene3D G3DSA:3.40.50.1950 1 183 1.2E-60 T 13-10-2018 IPR036551 Flavin prenyltransferase-like GO:0003824 Reactome: R-HSA-196783 COP00_13735 9f1bff0a066aec8dcab0a5211c29d5ea 135 Pfam PF02082 Transcriptional regulator 2 80 1.3E-21 T 13-10-2018 IPR000944 Transcription regulator Rrf2-type COP00_13735 9f1bff0a066aec8dcab0a5211c29d5ea 135 Gene3D G3DSA:1.10.10.10 1 135 1.7E-55 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_13735 9f1bff0a066aec8dcab0a5211c29d5ea 135 SUPERFAMILY SSF46785 5 130 1.07E-32 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_00935 fff20d10183627fa19ca6690c3705966 279 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 35 274 2.3E-75 T 13-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase COP00_00935 fff20d10183627fa19ca6690c3705966 279 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 41 276 1.8E-70 T 13-10-2018 IPR003730 Multi-copper polyphenol oxidoreductase COP00_00935 fff20d10183627fa19ca6690c3705966 279 SUPERFAMILY SSF64438 28 277 1.02E-83 T 13-10-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic COP00_00935 fff20d10183627fa19ca6690c3705966 279 Gene3D G3DSA:3.60.140.10 16 279 1.9E-95 T 13-10-2018 IPR038371 Multi-copper polyphenol oxidoreductase superfamily COP00_23260 5f3a8f02b58189fa5ff5e30452d8e2cc 59 Pfam PF11962 Peptidase_G2, IMC autoproteolytic cleavage domain 2 57 1.6E-22 T 13-10-2018 IPR021865 Peptidase G2, IMC autoproteolytic cleavage domain COP00_23260 5f3a8f02b58189fa5ff5e30452d8e2cc 59 Gene3D G3DSA:4.10.80.40 3 15 6.0E-20 T 13-10-2018 COP00_23260 5f3a8f02b58189fa5ff5e30452d8e2cc 59 Gene3D G3DSA:2.40.300.10 16 57 6.0E-20 T 13-10-2018 COP00_11505 e694372c621b33d353d88bfbf9bbd537 395 Gene3D G3DSA:1.20.1250.20 9 382 3.4E-49 T 13-10-2018 COP00_11505 e694372c621b33d353d88bfbf9bbd537 395 SUPERFAMILY SSF103473 8 384 7.85E-55 T 13-10-2018 IPR036259 MFS transporter superfamily COP00_11505 e694372c621b33d353d88bfbf9bbd537 395 Pfam PF07690 Major Facilitator Superfamily 17 321 2.7E-35 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 COP00_17760 239a32f98ff3bda1e75e79a6daf5f351 506 ProSitePatterns PS00455 Putative AMP-binding domain signature. 165 176 - T 13-10-2018 IPR020845 AMP-binding, conserved site COP00_17760 239a32f98ff3bda1e75e79a6daf5f351 506 Pfam PF00501 AMP-binding enzyme 19 409 4.4E-98 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 COP00_17760 239a32f98ff3bda1e75e79a6daf5f351 506 Pfam PF13193 AMP-binding enzyme C-terminal domain 419 492 1.1E-16 T 13-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain COP00_17760 239a32f98ff3bda1e75e79a6daf5f351 506 SUPERFAMILY SSF56801 6 504 2.62E-136 T 13-10-2018 COP00_17760 239a32f98ff3bda1e75e79a6daf5f351 506 Gene3D G3DSA:3.40.50.12780 2 402 7.1E-106 T 13-10-2018 COP00_17760 239a32f98ff3bda1e75e79a6daf5f351 506 Gene3D G3DSA:3.30.300.30 403 505 4.9E-28 T 13-10-2018 COP00_21815 210ae00a25cc9dfcbb297b948c3b17ef 144 Pfam PF00583 Acetyltransferase (GNAT) family 26 131 1.2E-11 T 13-10-2018 IPR000182 GNAT domain COP00_21815 210ae00a25cc9dfcbb297b948c3b17ef 144 Gene3D G3DSA:3.40.630.30 3 143 6.2E-22 T 13-10-2018 COP00_21815 210ae00a25cc9dfcbb297b948c3b17ef 144 SUPERFAMILY SSF55729 11 139 1.58E-19 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase COP00_10340 d6c62fb5012a70aae8f9b5b95a2c9124 166 Pfam PF13412 Winged helix-turn-helix DNA-binding 4 49 8.4E-7 T 13-10-2018 COP00_10340 d6c62fb5012a70aae8f9b5b95a2c9124 166 Gene3D G3DSA:1.10.10.10 3 54 3.6E-8 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_10340 d6c62fb5012a70aae8f9b5b95a2c9124 166 SMART SM00344 3 114 1.4E-6 T 13-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 COP00_10340 d6c62fb5012a70aae8f9b5b95a2c9124 166 Pfam PF01037 Lrp/AsnC ligand binding domain 73 144 2.7E-15 T 13-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain COP00_10340 d6c62fb5012a70aae8f9b5b95a2c9124 166 SUPERFAMILY SSF46785 3 61 9.6E-8 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_10340 d6c62fb5012a70aae8f9b5b95a2c9124 166 Gene3D G3DSA:3.30.70.920 55 153 1.3E-21 T 13-10-2018 COP00_10340 d6c62fb5012a70aae8f9b5b95a2c9124 166 SUPERFAMILY SSF54909 66 147 1.88E-18 T 13-10-2018 IPR011008 Dimeric alpha-beta barrel COP00_03140 e96bddb41cb5735fe5e2435a28424167 373 Pfam PF06114 IrrE N-terminal-like domain 78 160 5.9E-12 T 13-10-2018 IPR010359 IrrE N-terminal-like domain COP00_16570 2cd19753b492d48e3352307cf82355fb 214 Gene3D G3DSA:1.10.3130.10 2 67 1.2E-26 T 13-10-2018 COP00_16570 2cd19753b492d48e3352307cf82355fb 214 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 7 167 3.8E-77 T 13-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 COP00_16570 2cd19753b492d48e3352307cf82355fb 214 SUPERFAMILY SSF51161 3 169 9.29E-56 T 13-10-2018 IPR011004 Trimeric LpxA-like superfamily COP00_16570 2cd19753b492d48e3352307cf82355fb 214 Gene3D G3DSA:2.160.10.10 68 186 2.6E-37 T 13-10-2018 COP00_16570 2cd19753b492d48e3352307cf82355fb 214 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 72 109 0.0016 T 13-10-2018 IPR001451 Hexapeptide repeat COP00_16570 2cd19753b492d48e3352307cf82355fb 214 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 118 152 7.3E-8 T 13-10-2018 IPR001451 Hexapeptide repeat COP00_16570 2cd19753b492d48e3352307cf82355fb 214 PIRSF PIRSF000441 1 213 1.6E-83 T 13-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 COP00_05870 c6eabbd0983596ea40030b25dc865570 194 Gene3D G3DSA:1.10.10.10 107 167 1.0E-16 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_05870 c6eabbd0983596ea40030b25dc865570 194 SUPERFAMILY SSF88659 91 166 1.38E-14 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like COP00_05870 c6eabbd0983596ea40030b25dc865570 194 Pfam PF04542 Sigma-70 region 2 9 74 7.8E-17 T 13-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 COP00_05870 c6eabbd0983596ea40030b25dc865570 194 Pfam PF08281 Sigma-70, region 4 111 159 4.4E-10 T 13-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 COP00_05870 c6eabbd0983596ea40030b25dc865570 194 SUPERFAMILY SSF88946 3 85 7.85E-22 T 13-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 COP00_05870 c6eabbd0983596ea40030b25dc865570 194 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 4 165 1.4E-32 T 13-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 COP00_05870 c6eabbd0983596ea40030b25dc865570 194 Gene3D G3DSA:1.10.1740.10 1 71 9.6E-24 T 13-10-2018 COP00_05870 c6eabbd0983596ea40030b25dc865570 194 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 30 61 - T 13-10-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 COP00_16950 3caafb2067b292f53da95a2de060617e 445 Gene3D G3DSA:3.40.710.10 37 420 2.3E-88 T 13-10-2018 COP00_16950 3caafb2067b292f53da95a2de060617e 445 SUPERFAMILY SSF56601 51 415 3.76E-80 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like COP00_16950 3caafb2067b292f53da95a2de060617e 445 Hamap MF_01034 UPF0214 protein YfeW [yfeW]. 2 445 66.872 T 13-10-2018 IPR022849 Peptidase S12, UPF0214, YfeW-type COP00_16950 3caafb2067b292f53da95a2de060617e 445 Pfam PF00144 Beta-lactamase 56 424 3.5E-76 T 13-10-2018 IPR001466 Beta-lactamase-related COP00_23715 97232e31019de76ffc4ea1d1e43f58db 586 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 41 569 1.6E-204 T 13-10-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-4061|MetaCyc: PWY-5826|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7559 COP00_23715 97232e31019de76ffc4ea1d1e43f58db 586 SUPERFAMILY SSF56235 35 576 5.4E-177 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal COP00_23715 97232e31019de76ffc4ea1d1e43f58db 586 ProSitePatterns PS00462 Gamma-glutamyltranspeptidase signature. 397 421 - T 13-10-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-4061|MetaCyc: PWY-5826|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7559 COP00_23715 97232e31019de76ffc4ea1d1e43f58db 586 Pfam PF01019 Gamma-glutamyltranspeptidase 56 571 9.0E-169 T 13-10-2018 COP00_23715 97232e31019de76ffc4ea1d1e43f58db 586 Gene3D G3DSA:1.10.246.130 269 396 3.1E-51 T 13-10-2018 COP00_23715 97232e31019de76ffc4ea1d1e43f58db 586 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 397 415 2.4E-74 T 13-10-2018 COP00_23715 97232e31019de76ffc4ea1d1e43f58db 586 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 253 269 2.4E-74 T 13-10-2018 COP00_23715 97232e31019de76ffc4ea1d1e43f58db 586 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 63 88 2.4E-74 T 13-10-2018 COP00_23715 97232e31019de76ffc4ea1d1e43f58db 586 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 476 493 2.4E-74 T 13-10-2018 COP00_23715 97232e31019de76ffc4ea1d1e43f58db 586 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 452 467 2.4E-74 T 13-10-2018 COP00_23715 97232e31019de76ffc4ea1d1e43f58db 586 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 138 156 2.4E-74 T 13-10-2018 COP00_23715 97232e31019de76ffc4ea1d1e43f58db 586 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 283 302 2.4E-74 T 13-10-2018 COP00_23715 97232e31019de76ffc4ea1d1e43f58db 586 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 421 439 2.4E-74 T 13-10-2018 COP00_23715 97232e31019de76ffc4ea1d1e43f58db 586 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 156 175 2.4E-74 T 13-10-2018 COP00_23715 97232e31019de76ffc4ea1d1e43f58db 586 Gene3D G3DSA:3.60.20.40 397 575 1.3E-72 T 13-10-2018 COP00_19675 a187e9b7f8db38ab0b67c7410405651b 124 SMART SM00507 57 113 7.3E-7 T 13-10-2018 IPR003615 HNH nuclease COP00_19675 a187e9b7f8db38ab0b67c7410405651b 124 Pfam PF01844 HNH endonuclease 70 116 7.7E-13 T 13-10-2018 IPR002711 HNH endonuclease GO:0003676|GO:0004519 COP00_23995 0ac692f810d39748b8877cfbc09a1fad 762 PIRSF PIRSF000382 3 762 0.0 T 13-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 COP00_23995 0ac692f810d39748b8877cfbc09a1fad 762 TIGRFAM TIGR01371 met_syn_B12ind: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 9 757 0.0 T 13-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 COP00_23995 0ac692f810d39748b8877cfbc09a1fad 762 Pfam PF08267 Cobalamin-independent synthase, N-terminal domain 6 309 1.2E-117 T 13-10-2018 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal GO:0003871|GO:0008270|GO:0008652 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 COP00_23995 0ac692f810d39748b8877cfbc09a1fad 762 Gene3D G3DSA:3.20.20.210 8 523 0.0 T 13-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 COP00_23995 0ac692f810d39748b8877cfbc09a1fad 762 SUPERFAMILY SSF51726 6 385 2.09E-87 T 13-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 COP00_23995 0ac692f810d39748b8877cfbc09a1fad 762 Hamap MF_00172 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [metE]. 4 757 33.899 T 13-10-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 COP00_23995 0ac692f810d39748b8877cfbc09a1fad 762 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 430 752 1.4E-155 T 13-10-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 COP00_23995 0ac692f810d39748b8877cfbc09a1fad 762 Gene3D G3DSA:3.20.20.210 388 755 0.0 T 13-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 COP00_23995 0ac692f810d39748b8877cfbc09a1fad 762 SUPERFAMILY SSF51726 397 756 1.44E-118 T 13-10-2018 IPR038071 UROD/MetE-like superfamily Reactome: R-HSA-189451 COP00_22740 fdcc77ded8c673377e0973f61036a467 353 SUPERFAMILY SSF52021 1 136 2.62E-51 T 13-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 COP00_22740 fdcc77ded8c673377e0973f61036a467 353 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 1 347 43.791 T 13-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 COP00_22740 fdcc77ded8c673377e0973f61036a467 353 PRINTS PR00096 Glutamine amidotransferase superfamily signature 232 243 8.5E-12 T 13-10-2018 COP00_22740 fdcc77ded8c673377e0973f61036a467 353 PRINTS PR00096 Glutamine amidotransferase superfamily signature 205 214 8.5E-12 T 13-10-2018 COP00_22740 fdcc77ded8c673377e0973f61036a467 353 PRINTS PR00096 Glutamine amidotransferase superfamily signature 318 331 8.5E-12 T 13-10-2018 COP00_22740 fdcc77ded8c673377e0973f61036a467 353 Gene3D G3DSA:3.50.30.20 1 147 7.5E-54 T 13-10-2018 IPR036480 Carbamoyl-phosphate synthase small subunit, N-terminal domain superfamily KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 COP00_22740 fdcc77ded8c673377e0973f61036a467 353 SMART SM01097 1 130 7.4E-77 T 13-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 COP00_22740 fdcc77ded8c673377e0973f61036a467 353 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 3 128 2.1E-50 T 13-10-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 COP00_22740 fdcc77ded8c673377e0973f61036a467 353 Gene3D G3DSA:3.40.50.880 163 341 9.6E-35 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like COP00_22740 fdcc77ded8c673377e0973f61036a467 353 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 4 344 5.7E-137 T 13-10-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 COP00_22740 fdcc77ded8c673377e0973f61036a467 353 Pfam PF00117 Glutamine amidotransferase class-I 166 341 1.0E-46 T 13-10-2018 IPR017926 Glutamine amidotransferase COP00_22740 fdcc77ded8c673377e0973f61036a467 353 SUPERFAMILY SSF52317 159 343 1.03E-51 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like COP00_22740 fdcc77ded8c673377e0973f61036a467 353 PRINTS PR00097 Anthranilate synthase component II signature 205 214 2.0E-7 T 13-10-2018 COP00_22740 fdcc77ded8c673377e0973f61036a467 353 PRINTS PR00097 Anthranilate synthase component II signature 232 243 2.0E-7 T 13-10-2018 COP00_22740 fdcc77ded8c673377e0973f61036a467 353 PRINTS PR00097 Anthranilate synthase component II signature 318 331 2.0E-7 T 13-10-2018 COP00_22740 fdcc77ded8c673377e0973f61036a467 353 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 202 216 6.4E-33 T 13-10-2018 COP00_22740 fdcc77ded8c673377e0973f61036a467 353 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 249 266 6.4E-33 T 13-10-2018 COP00_22740 fdcc77ded8c673377e0973f61036a467 353 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 232 248 6.4E-33 T 13-10-2018 COP00_22740 fdcc77ded8c673377e0973f61036a467 353 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 164 178 6.4E-33 T 13-10-2018 COP00_22740 fdcc77ded8c673377e0973f61036a467 353 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 274 285 6.4E-33 T 13-10-2018 COP00_03795 487f33902f1207c8245bbea56968b246 240 Pfam PF14256 YwiC-like protein 5 128 2.0E-36 T 13-10-2018 IPR025576 YwiC-like protein COP00_20195 1a776ac07ababa48b29ded6f5fca25c3 431 SMART SM00998 349 429 4.5E-40 T 13-10-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 COP00_20195 1a776ac07ababa48b29ded6f5fca25c3 431 PRINTS PR00149 Fumarate lyase superfamily signature 261 277 7.7E-27 T 13-10-2018 IPR000362 Fumarate lyase family COP00_20195 1a776ac07ababa48b29ded6f5fca25c3 431 PRINTS PR00149 Fumarate lyase superfamily signature 88 106 7.7E-27 T 13-10-2018 IPR000362 Fumarate lyase family COP00_20195 1a776ac07ababa48b29ded6f5fca25c3 431 PRINTS PR00149 Fumarate lyase superfamily signature 216 243 7.7E-27 T 13-10-2018 IPR000362 Fumarate lyase family COP00_20195 1a776ac07ababa48b29ded6f5fca25c3 431 PRINTS PR00149 Fumarate lyase superfamily signature 133 151 7.7E-27 T 13-10-2018 IPR000362 Fumarate lyase family COP00_20195 1a776ac07ababa48b29ded6f5fca25c3 431 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 1 428 1.2E-187 T 13-10-2018 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 COP00_20195 1a776ac07ababa48b29ded6f5fca25c3 431 ProSitePatterns PS00163 Fumarate lyases signature. 261 270 - T 13-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 COP00_20195 1a776ac07ababa48b29ded6f5fca25c3 431 Pfam PF00206 Lyase 7 286 6.1E-83 T 13-10-2018 IPR022761 Fumarate lyase, N-terminal COP00_20195 1a776ac07ababa48b29ded6f5fca25c3 431 Pfam PF10397 Adenylosuccinate lyase C-terminus 350 427 4.7E-25 T 13-10-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 COP00_20195 1a776ac07ababa48b29ded6f5fca25c3 431 Gene3D G3DSA:1.20.200.10 93 348 8.4E-105 T 13-10-2018 COP00_20195 1a776ac07ababa48b29ded6f5fca25c3 431 SUPERFAMILY SSF48557 3 427 6.13E-143 T 13-10-2018 IPR008948 L-Aspartase-like GO:0003824 COP00_20195 1a776ac07ababa48b29ded6f5fca25c3 431 Gene3D G3DSA:1.10.40.30 349 431 2.6E-34 T 13-10-2018 COP00_20195 1a776ac07ababa48b29ded6f5fca25c3 431 PRINTS PR00145 Argininosuccinate lyase family signature 87 109 1.7E-10 T 13-10-2018 COP00_20195 1a776ac07ababa48b29ded6f5fca25c3 431 PRINTS PR00145 Argininosuccinate lyase family signature 216 240 1.7E-10 T 13-10-2018 COP00_20195 1a776ac07ababa48b29ded6f5fca25c3 431 PRINTS PR00145 Argininosuccinate lyase family signature 128 148 1.7E-10 T 13-10-2018 COP00_20195 1a776ac07ababa48b29ded6f5fca25c3 431 PRINTS PR00145 Argininosuccinate lyase family signature 261 277 1.7E-10 T 13-10-2018 COP00_20195 1a776ac07ababa48b29ded6f5fca25c3 431 Gene3D G3DSA:1.10.275.10 1 92 1.1E-39 T 13-10-2018 IPR024083 Fumarase/histidase, N-terminal COP00_20405 1466c1db5b41bde2642a4471619b87d3 369 Pfam PF13181 Tetratricopeptide repeat 181 206 0.12 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 COP00_20405 1466c1db5b41bde2642a4471619b87d3 369 SMART SM00028 175 208 8.4 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 COP00_20405 1466c1db5b41bde2642a4471619b87d3 369 SMART SM00028 328 361 84.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 COP00_20405 1466c1db5b41bde2642a4471619b87d3 369 SMART SM00028 254 287 56.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 COP00_20405 1466c1db5b41bde2642a4471619b87d3 369 Gene3D G3DSA:1.25.40.10 1 364 2.0E-87 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 COP00_20405 1466c1db5b41bde2642a4471619b87d3 369 SUPERFAMILY SSF48452 110 359 4.44E-20 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 COP00_11485 044b6fa5a919095e8a638b0220c89114 496 Gene3D G3DSA:3.30.420.40 238 488 7.0E-97 T 13-10-2018 COP00_11485 044b6fa5a919095e8a638b0220c89114 496 PIRSF PIRSF000538 1 491 1.4E-42 T 13-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 COP00_11485 044b6fa5a919095e8a638b0220c89114 496 SUPERFAMILY SSF53067 3 246 2.03E-51 T 13-10-2018 COP00_11485 044b6fa5a919095e8a638b0220c89114 496 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 3 245 1.5E-30 T 13-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 COP00_11485 044b6fa5a919095e8a638b0220c89114 496 SUPERFAMILY SSF53067 252 485 8.63E-37 T 13-10-2018 COP00_11485 044b6fa5a919095e8a638b0220c89114 496 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 254 445 1.9E-29 T 13-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 COP00_11485 044b6fa5a919095e8a638b0220c89114 496 Gene3D G3DSA:3.30.420.40 1 237 2.2E-83 T 13-10-2018 COP00_15965 7712923b5ba33531dcfdb2046a438122 819 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 3 808 25.219 T 13-10-2018 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 COP00_15965 7712923b5ba33531dcfdb2046a438122 819 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 710 755 7.1E-14 T 13-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 COP00_15965 7712923b5ba33531dcfdb2046a438122 819 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 660 705 2.7E-14 T 13-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 COP00_15965 7712923b5ba33531dcfdb2046a438122 819 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 506 551 2.6E-13 T 13-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 COP00_15965 7712923b5ba33531dcfdb2046a438122 819 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 612 655 3.5E-8 T 13-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 COP00_15965 7712923b5ba33531dcfdb2046a438122 819 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 555 603 6.0E-9 T 13-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 COP00_15965 7712923b5ba33531dcfdb2046a438122 819 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 760 806 2.3E-10 T 13-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 COP00_15965 7712923b5ba33531dcfdb2046a438122 819 Gene3D G3DSA:1.10.268.10 370 459 4.9E-222 T 13-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 COP00_15965 7712923b5ba33531dcfdb2046a438122 819 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 33 472 6.1E-164 T 13-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 COP00_15965 7712923b5ba33531dcfdb2046a438122 819 Gene3D G3DSA:3.30.1360.40 237 333 4.9E-222 T 13-10-2018 COP00_15965 7712923b5ba33531dcfdb2046a438122 819 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 9 807 0.0 T 13-10-2018 COP00_15965 7712923b5ba33531dcfdb2046a438122 819 SMART SM00434 12 465 6.2E-301 T 13-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 COP00_15965 7712923b5ba33531dcfdb2046a438122 819 Gene3D G3DSA:3.90.199.10 33 486 4.9E-222 T 13-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 COP00_15965 7712923b5ba33531dcfdb2046a438122 819 SUPERFAMILY SSF101904 500 817 9.02E-115 T 13-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal COP00_15965 7712923b5ba33531dcfdb2046a438122 819 Gene3D G3DSA:2.120.10.90 497 807 6.2E-128 T 13-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal COP00_15965 7712923b5ba33531dcfdb2046a438122 819 SUPERFAMILY SSF56719 31 488 2.62E-185 T 13-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 COP00_13230 499b5f1bc4aade772c1cda5192289a30 292 SUPERFAMILY SSF53448 1 268 2.92E-69 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases COP00_13230 499b5f1bc4aade772c1cda5192289a30 292 Pfam PF00483 Nucleotidyl transferase 6 263 1.3E-33 T 13-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 COP00_13230 499b5f1bc4aade772c1cda5192289a30 292 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 4 264 7.9E-125 T 13-10-2018 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817 COP00_13230 499b5f1bc4aade772c1cda5192289a30 292 Gene3D G3DSA:3.90.550.10 1 290 1.8E-94 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases COP00_18905 13f03d86ac3966d22b762d868203da11 144 Pfam PF09954 Uncharacterized protein conserved in bacteria (DUF2188) 85 141 1.9E-16 T 13-10-2018 IPR018691 Protein of unknown function DUF2188 COP00_22820 73777cf8d783b33cd1b3ca66446a53aa 316 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 115 315 2.0E-44 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 COP00_22820 73777cf8d783b33cd1b3ca66446a53aa 316 SUPERFAMILY SSF161098 91 303 2.49E-19 T 13-10-2018 IPR035906 MetI-like superfamily COP00_22820 73777cf8d783b33cd1b3ca66446a53aa 316 Gene3D G3DSA:1.10.3720.10 86 310 2.0E-24 T 13-10-2018 IPR035906 MetI-like superfamily COP00_16750 6500d18a63cdd17918bceedd2475a31a 132 Pfam PF00410 Ribosomal protein S8 5 132 3.3E-55 T 13-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 COP00_16750 6500d18a63cdd17918bceedd2475a31a 132 ProSitePatterns PS00053 Ribosomal protein S8 signature. 102 119 - T 13-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 COP00_16750 6500d18a63cdd17918bceedd2475a31a 132 Gene3D G3DSA:3.30.1370.30 4 74 2.8E-34 T 13-10-2018 COP00_16750 6500d18a63cdd17918bceedd2475a31a 132 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 132 33.154 T 13-10-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 COP00_16750 6500d18a63cdd17918bceedd2475a31a 132 Gene3D G3DSA:3.30.1490.10 75 132 7.2E-27 T 13-10-2018 COP00_16750 6500d18a63cdd17918bceedd2475a31a 132 SUPERFAMILY SSF56047 2 132 1.57E-50 T 13-10-2018 IPR035987 Ribosomal protein S8 superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 COP00_15910 ce8ff601bf76b0e83accbcb78c3bddcc 459 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 9 459 1.1E-131 T 13-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 COP00_15910 ce8ff601bf76b0e83accbcb78c3bddcc 459 Gene3D G3DSA:1.20.120.430 125 459 6.8E-108 T 13-10-2018 IPR027368 tRNA modification GTPase MnmE domain 2 Reactome: R-HSA-6787450 COP00_15910 ce8ff601bf76b0e83accbcb78c3bddcc 459 Pfam PF10396 GTP-binding protein TrmE N-terminus 3 124 1.2E-40 T 13-10-2018 IPR018948 GTP-binding protein TrmE, N-terminal Reactome: R-HSA-6787450 COP00_15910 ce8ff601bf76b0e83accbcb78c3bddcc 459 PRINTS PR00449 Transforming protein P21 ras signature 222 243 2.1E-5 T 13-10-2018 COP00_15910 ce8ff601bf76b0e83accbcb78c3bddcc 459 PRINTS PR00449 Transforming protein P21 ras signature 262 284 2.1E-5 T 13-10-2018 COP00_15910 ce8ff601bf76b0e83accbcb78c3bddcc 459 PRINTS PR00449 Transforming protein P21 ras signature 326 339 2.1E-5 T 13-10-2018 COP00_15910 ce8ff601bf76b0e83accbcb78c3bddcc 459 Gene3D G3DSA:3.40.50.300 222 387 6.8E-108 T 13-10-2018 COP00_15910 ce8ff601bf76b0e83accbcb78c3bddcc 459 SUPERFAMILY SSF52540 78 375 3.5E-47 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_15910 ce8ff601bf76b0e83accbcb78c3bddcc 459 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 2 459 34.448 T 13-10-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 COP00_15910 ce8ff601bf76b0e83accbcb78c3bddcc 459 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 223 375 3.7E-28 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 COP00_15910 ce8ff601bf76b0e83accbcb78c3bddcc 459 Pfam PF01926 50S ribosome-binding GTPase 225 336 2.6E-25 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 COP00_15910 ce8ff601bf76b0e83accbcb78c3bddcc 459 SUPERFAMILY SSF116878 125 459 2.75E-50 T 13-10-2018 COP00_15910 ce8ff601bf76b0e83accbcb78c3bddcc 459 Gene3D G3DSA:3.30.1360.120 1 124 8.1E-48 T 13-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 COP00_15910 ce8ff601bf76b0e83accbcb78c3bddcc 459 Pfam PF12631 MnmE helical domain 127 456 2.3E-60 T 13-10-2018 IPR025867 MnmE, helical domain Reactome: R-HSA-6787450 COP00_03275 526baf924143d0d1217985664fd29245 427 SUPERFAMILY SSF56563 125 401 2.22E-49 T 13-10-2018 COP00_03275 526baf924143d0d1217985664fd29245 427 Gene3D G3DSA:3.30.2400.10 199 390 1.5E-9 T 13-10-2018 COP00_03275 526baf924143d0d1217985664fd29245 427 Gene3D G3DSA:3.30.2320.10 255 395 1.5E-9 T 13-10-2018 COP00_03275 526baf924143d0d1217985664fd29245 427 TIGRFAM TIGR01554 major_cap_HK97: phage major capsid protein, HK97 family 24 400 8.9E-84 T 13-10-2018 IPR024455 Phage capsid COP00_03275 526baf924143d0d1217985664fd29245 427 Pfam PF05065 Phage capsid family 133 399 3.9E-32 T 13-10-2018 IPR024455 Phage capsid COP00_03790 1021f0e9c55e22a32765158204afaa00 155 Gene3D G3DSA:2.60.120.10 8 150 1.0E-9 T 13-10-2018 IPR014710 RmlC-like jelly roll fold COP00_03790 1021f0e9c55e22a32765158204afaa00 155 SUPERFAMILY SSF51206 48 143 1.7E-10 T 13-10-2018 IPR018490 Cyclic nucleotide-binding-like COP00_18325 ce21557b606ca1fd2592ea589af55d07 371 Gene3D G3DSA:3.40.50.720 6 351 2.3E-106 T 13-10-2018 COP00_18325 ce21557b606ca1fd2592ea589af55d07 371 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 7 128 2.0E-18 T 13-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 COP00_18325 ce21557b606ca1fd2592ea589af55d07 371 SUPERFAMILY SSF51735 6 161 1.15E-39 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily COP00_18325 ce21557b606ca1fd2592ea589af55d07 371 Gene3D G3DSA:3.30.360.10 140 358 2.3E-106 T 13-10-2018 COP00_18325 ce21557b606ca1fd2592ea589af55d07 371 SUPERFAMILY SSF55347 134 274 6.76E-18 T 13-10-2018 COP00_09385 82a03ae515e7c46c51813045fc00fb4c 136 SUPERFAMILY SSF58104 27 128 1.16E-5 T 13-10-2018 COP00_09385 82a03ae515e7c46c51813045fc00fb4c 136 Gene3D G3DSA:1.10.287.950 21 134 3.5E-6 T 13-10-2018 COP00_09385 82a03ae515e7c46c51813045fc00fb4c 136 Pfam PF06103 Bacterial protein of unknown function (DUF948) 8 94 1.9E-25 T 13-10-2018 IPR009293 Uncharacterised protein family UPF0478 COP00_21500 71fc8cf01ec6d2f49b25a9736fd14b4c 521 Pfam PF07690 Major Facilitator Superfamily 8 398 4.1E-57 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 COP00_21500 71fc8cf01ec6d2f49b25a9736fd14b4c 521 Gene3D G3DSA:1.20.1720.10 3 211 9.6E-43 T 13-10-2018 COP00_21500 71fc8cf01ec6d2f49b25a9736fd14b4c 521 PRINTS PR01036 Tetracycline resistance protein TetB signature 127 151 4.5E-11 T 13-10-2018 COP00_21500 71fc8cf01ec6d2f49b25a9736fd14b4c 521 PRINTS PR01036 Tetracycline resistance protein TetB signature 6 30 4.5E-11 T 13-10-2018 COP00_21500 71fc8cf01ec6d2f49b25a9736fd14b4c 521 PRINTS PR01036 Tetracycline resistance protein TetB signature 97 117 4.5E-11 T 13-10-2018 COP00_21500 71fc8cf01ec6d2f49b25a9736fd14b4c 521 PRINTS PR01036 Tetracycline resistance protein TetB signature 291 315 4.5E-11 T 13-10-2018 COP00_21500 71fc8cf01ec6d2f49b25a9736fd14b4c 521 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 1 492 8.0E-179 T 13-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 COP00_21500 71fc8cf01ec6d2f49b25a9736fd14b4c 521 SUPERFAMILY SSF103473 3 502 2.09E-76 T 13-10-2018 IPR036259 MFS transporter superfamily COP00_02470 2e6ab454fbc140087b919330ce0c4b63 589 Gene3D G3DSA:3.40.50.300 3 245 2.5E-32 T 13-10-2018 COP00_02470 2e6ab454fbc140087b919330ce0c4b63 589 SUPERFAMILY SSF52540 59 198 5.32E-5 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_02470 2e6ab454fbc140087b919330ce0c4b63 589 Pfam PF03237 Terminase-like family 81 197 9.2E-8 T 13-10-2018 IPR004921 Terminase large subunit, T4likevirus-type COP00_17345 98279e837272109969fefeb6fd022781 400 Gene3D G3DSA:1.25.40.10 157 392 2.4E-67 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 COP00_17345 98279e837272109969fefeb6fd022781 400 SUPERFAMILY SSF48452 103 310 4.3E-15 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 COP00_17345 98279e837272109969fefeb6fd022781 400 Pfam PF13424 Tetratricopeptide repeat 224 294 1.1E-7 T 13-10-2018 COP00_17345 98279e837272109969fefeb6fd022781 400 SMART SM00028 264 299 14.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 COP00_17345 98279e837272109969fefeb6fd022781 400 SMART SM00028 144 177 9.6 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 COP00_17345 98279e837272109969fefeb6fd022781 400 SMART SM00028 225 258 58.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 COP00_17345 98279e837272109969fefeb6fd022781 400 Gene3D G3DSA:1.25.40.10 7 156 2.2E-47 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 COP00_02480 d818ceabbdcae513f16ba087614af669 65 SUPERFAMILY SSF47413 2 63 4.56E-18 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 COP00_02480 d818ceabbdcae513f16ba087614af669 65 SMART SM00530 4 59 5.4E-13 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 COP00_02480 d818ceabbdcae513f16ba087614af669 65 Pfam PF01381 Helix-turn-helix 7 54 5.5E-15 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 COP00_02480 d818ceabbdcae513f16ba087614af669 65 Gene3D G3DSA:1.10.260.40 1 65 3.0E-26 T 13-10-2018 COP00_04025 673c5323e7e9e66d1100c8c067e6055b 693 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 91 358 4.5E-35 T 13-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 COP00_04025 673c5323e7e9e66d1100c8c067e6055b 693 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 387 615 4.0E-47 T 13-10-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 COP00_04025 673c5323e7e9e66d1100c8c067e6055b 693 Gene3D G3DSA:2.70.150.20 123 227 2.2E-28 T 13-10-2018 COP00_04025 673c5323e7e9e66d1100c8c067e6055b 693 SUPERFAMILY SSF56784 308 572 9.42E-42 T 13-10-2018 IPR036412 HAD-like superfamily COP00_04025 673c5323e7e9e66d1100c8c067e6055b 693 SUPERFAMILY SSF81665 61 314 1.44E-9 T 13-10-2018 IPR023298 P-type ATPase, transmembrane domain superfamily Reactome: R-HSA-936837 COP00_04025 673c5323e7e9e66d1100c8c067e6055b 693 Gene3D G3DSA:3.40.1110.10 335 464 1.1E-43 T 13-10-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 COP00_04025 673c5323e7e9e66d1100c8c067e6055b 693 Pfam PF00122 E1-E2 ATPase 126 298 8.2E-36 T 13-10-2018 COP00_04025 673c5323e7e9e66d1100c8c067e6055b 693 Pfam PF00702 haloacid dehalogenase-like hydrolase 316 543 1.2E-35 T 13-10-2018 COP00_04025 673c5323e7e9e66d1100c8c067e6055b 693 TIGRFAM TIGR01497 kdpB: K+-transporting ATPase, B subunit 22 689 0.0 T 13-10-2018 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 COP00_04025 673c5323e7e9e66d1100c8c067e6055b 693 Hamap MF_00285 Potassium-transporting ATPase ATP-binding subunit [kdpB]. 27 693 40.429 T 13-10-2018 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 COP00_04025 673c5323e7e9e66d1100c8c067e6055b 693 SUPERFAMILY SSF81653 125 222 1.7E-22 T 13-10-2018 IPR008250 P-type ATPase, A domain superfamily Reactome: R-HSA-936837 COP00_04025 673c5323e7e9e66d1100c8c067e6055b 693 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 454 465 4.8E-26 T 13-10-2018 COP00_04025 673c5323e7e9e66d1100c8c067e6055b 693 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 169 183 4.8E-26 T 13-10-2018 COP00_04025 673c5323e7e9e66d1100c8c067e6055b 693 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 476 486 4.8E-26 T 13-10-2018 COP00_04025 673c5323e7e9e66d1100c8c067e6055b 693 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 320 334 4.8E-26 T 13-10-2018 COP00_04025 673c5323e7e9e66d1100c8c067e6055b 693 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 529 548 4.8E-26 T 13-10-2018 COP00_04025 673c5323e7e9e66d1100c8c067e6055b 693 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 552 564 4.8E-26 T 13-10-2018 COP00_04025 673c5323e7e9e66d1100c8c067e6055b 693 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 322 328 - T 13-10-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 COP00_15760 9c93c3ac56e46fc74b5284a1f6b3dfcb 454 Pfam PF03796 DnaB-like helicase C terminal domain 185 440 9.1E-121 T 13-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 COP00_15760 9c93c3ac56e46fc74b5284a1f6b3dfcb 454 SMART SM00382 202 391 0.0045 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_15760 9c93c3ac56e46fc74b5284a1f6b3dfcb 454 Gene3D G3DSA:1.10.860.10 1 166 9.1E-66 T 13-10-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal COP00_15760 9c93c3ac56e46fc74b5284a1f6b3dfcb 454 SUPERFAMILY SSF48024 8 119 8.24E-38 T 13-10-2018 IPR036185 DNA helicase, DnaB-like, N-terminal domain superfamily GO:0003678|GO:0005524|GO:0006260 COP00_15760 9c93c3ac56e46fc74b5284a1f6b3dfcb 454 Gene3D G3DSA:3.40.50.300 167 454 4.1E-122 T 13-10-2018 COP00_15760 9c93c3ac56e46fc74b5284a1f6b3dfcb 454 Pfam PF00772 DnaB-like helicase N terminal domain 10 111 1.3E-35 T 13-10-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 COP00_15760 9c93c3ac56e46fc74b5284a1f6b3dfcb 454 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 9 442 1.7E-189 T 13-10-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 COP00_15760 9c93c3ac56e46fc74b5284a1f6b3dfcb 454 SUPERFAMILY SSF52540 183 433 1.27E-55 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_19000 8ba0dafbd2aa411f407357353bc0e03d 361 SUPERFAMILY SSF52440 2 134 1.73E-35 T 13-10-2018 IPR016185 Pre-ATP-grasp domain superfamily COP00_19000 8ba0dafbd2aa411f407357353bc0e03d 361 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 290 318 - T 13-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 COP00_19000 8ba0dafbd2aa411f407357353bc0e03d 361 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 4 347 5.6E-119 T 13-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 COP00_19000 8ba0dafbd2aa411f407357353bc0e03d 361 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 3 348 41.758 T 13-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 COP00_19000 8ba0dafbd2aa411f407357353bc0e03d 361 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 102 113 - T 13-10-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 COP00_19000 8ba0dafbd2aa411f407357353bc0e03d 361 Pfam PF01820 D-ala D-ala ligase N-terminus 5 124 2.4E-30 T 13-10-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 COP00_19000 8ba0dafbd2aa411f407357353bc0e03d 361 PIRSF PIRSF039102 1 356 8.1E-116 T 13-10-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 COP00_19000 8ba0dafbd2aa411f407357353bc0e03d 361 SUPERFAMILY SSF56059 135 353 2.05E-60 T 13-10-2018 COP00_19000 8ba0dafbd2aa411f407357353bc0e03d 361 Pfam PF07478 D-ala D-ala ligase C-terminus 142 345 1.7E-81 T 13-10-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 COP00_19000 8ba0dafbd2aa411f407357353bc0e03d 361 Gene3D G3DSA:3.40.50.20 1 123 4.8E-36 T 13-10-2018 COP00_19000 8ba0dafbd2aa411f407357353bc0e03d 361 Gene3D G3DSA:3.30.1490.20 150 222 1.9E-29 T 13-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 COP00_19000 8ba0dafbd2aa411f407357353bc0e03d 361 Gene3D G3DSA:3.30.470.20 223 361 1.8E-51 T 13-10-2018 COP00_16630 8f19cac39ed5e8dd5e033865292a5dfc 123 SUPERFAMILY SSF54736 52 123 2.96E-25 T 13-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like COP00_16630 8f19cac39ed5e8dd5e033865292a5dfc 123 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 2 123 25.724 T 13-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_16630 8f19cac39ed5e8dd5e033865292a5dfc 123 Gene3D G3DSA:3.30.1390.10 54 123 4.1E-31 T 13-10-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like COP00_16630 8f19cac39ed5e8dd5e033865292a5dfc 123 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 58 96 1.0E-14 T 13-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_16630 8f19cac39ed5e8dd5e033865292a5dfc 123 Gene3D G3DSA:1.20.5.710 3 53 9.7E-20 T 13-10-2018 COP00_16630 8f19cac39ed5e8dd5e033865292a5dfc 123 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 5 51 3.7E-19 T 13-10-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_16630 8f19cac39ed5e8dd5e033865292a5dfc 123 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 57 123 1.6E-30 T 13-10-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_16630 8f19cac39ed5e8dd5e033865292a5dfc 123 SUPERFAMILY SSF48300 4 58 8.63E-17 T 13-10-2018 IPR036235 Ribosomal protein L7/L12, oligomerisation domain superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_16630 8f19cac39ed5e8dd5e033865292a5dfc 123 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 123 5.9E-52 T 13-10-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_12970 1bf2f3d8cce6b7d2b899813fa27e7763 661 Gene3D G3DSA:3.40.50.300 1 241 1.8E-85 T 13-10-2018 COP00_12970 1bf2f3d8cce6b7d2b899813fa27e7763 661 SMART SM00487 9 424 2.5E-25 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain COP00_12970 1bf2f3d8cce6b7d2b899813fa27e7763 661 Pfam PF12344 Ultra-violet resistance protein B 551 593 1.4E-21 T 13-10-2018 IPR024759 UvrB, YAD/RRR-motif-containing domain COP00_12970 1bf2f3d8cce6b7d2b899813fa27e7763 661 Pfam PF04851 Type III restriction enzyme, res subunit 13 138 6.4E-12 T 13-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 COP00_12970 1bf2f3d8cce6b7d2b899813fa27e7763 661 Hamap MF_00204 UvrABC system protein B [uvrB]. 3 660 45.436 T 13-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 COP00_12970 1bf2f3d8cce6b7d2b899813fa27e7763 661 SUPERFAMILY SSF52540 34 580 1.05E-35 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_12970 1bf2f3d8cce6b7d2b899813fa27e7763 661 SUPERFAMILY SSF46600 616 659 5.23E-10 T 13-10-2018 IPR036876 UVR domain superfamily COP00_12970 1bf2f3d8cce6b7d2b899813fa27e7763 661 Gene3D G3DSA:3.40.50.300 275 413 2.7E-55 T 13-10-2018 COP00_12970 1bf2f3d8cce6b7d2b899813fa27e7763 661 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 4 658 0.0 T 13-10-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006289|GO:0009380|GO:0016887 COP00_12970 1bf2f3d8cce6b7d2b899813fa27e7763 661 Pfam PF00271 Helicase conserved C-terminal domain 442 544 1.1E-18 T 13-10-2018 IPR001650 Helicase, C-terminal COP00_12970 1bf2f3d8cce6b7d2b899813fa27e7763 661 Gene3D G3DSA:3.40.50.300 414 595 5.6E-53 T 13-10-2018 COP00_12970 1bf2f3d8cce6b7d2b899813fa27e7763 661 SMART SM00490 459 545 7.6E-22 T 13-10-2018 IPR001650 Helicase, C-terminal COP00_12970 1bf2f3d8cce6b7d2b899813fa27e7763 661 SUPERFAMILY SSF52540 3 414 3.6E-144 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_12970 1bf2f3d8cce6b7d2b899813fa27e7763 661 Pfam PF02151 UvrB/uvrC motif 625 659 3.0E-9 T 13-10-2018 IPR001943 UVR domain GO:0005515 COP00_21660 b2ca8e85f7ffdb6395e7040598082393 303 Gene3D G3DSA:1.20.1530.20 158 301 4.5E-6 T 13-10-2018 IPR038770 Sodium/solute symporter superfamily COP00_21660 b2ca8e85f7ffdb6395e7040598082393 303 Pfam PF03547 Membrane transport protein 151 295 3.9E-19 T 13-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 COP00_21660 b2ca8e85f7ffdb6395e7040598082393 303 Pfam PF03547 Membrane transport protein 7 138 4.1E-10 T 13-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 COP00_01240 2980ebec1b92eff1d6cdc4e0c8efb7bb 446 Gene3D G3DSA:1.10.260.30 328 444 7.0E-45 T 13-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 COP00_01240 2980ebec1b92eff1d6cdc4e0c8efb7bb 446 SMART SM00962 101 297 9.7E-124 T 13-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 COP00_01240 2980ebec1b92eff1d6cdc4e0c8efb7bb 446 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 270 283 - T 13-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 COP00_01240 2980ebec1b92eff1d6cdc4e0c8efb7bb 446 Gene3D G3DSA:3.40.50.300 91 286 1.9E-131 T 13-10-2018 COP00_01240 2980ebec1b92eff1d6cdc4e0c8efb7bb 446 Gene3D G3DSA:1.20.120.140 6 307 1.9E-131 T 13-10-2018 COP00_01240 2980ebec1b92eff1d6cdc4e0c8efb7bb 446 SMART SM00382 100 302 5.7E-11 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_01240 2980ebec1b92eff1d6cdc4e0c8efb7bb 446 Pfam PF02978 Signal peptide binding domain 329 427 9.0E-35 T 13-10-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 COP00_01240 2980ebec1b92eff1d6cdc4e0c8efb7bb 446 SUPERFAMILY SSF47446 329 430 7.52E-39 T 13-10-2018 IPR036891 Signal recognition particle, SRP54 subunit, M-domain superfamily GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 COP00_01240 2980ebec1b92eff1d6cdc4e0c8efb7bb 446 SUPERFAMILY SSF52540 43 355 5.67E-60 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_01240 2980ebec1b92eff1d6cdc4e0c8efb7bb 446 Pfam PF02881 SRP54-type protein, helical bundle domain 6 83 5.5E-23 T 13-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 COP00_01240 2980ebec1b92eff1d6cdc4e0c8efb7bb 446 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 6 434 36.029 T 13-10-2018 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 Reactome: R-HSA-1799339 COP00_01240 2980ebec1b92eff1d6cdc4e0c8efb7bb 446 TIGRFAM TIGR00959 ffh: signal recognition particle protein 3 429 7.4E-193 T 13-10-2018 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 COP00_01240 2980ebec1b92eff1d6cdc4e0c8efb7bb 446 SMART SM00963 2 87 2.1E-34 T 13-10-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 COP00_01240 2980ebec1b92eff1d6cdc4e0c8efb7bb 446 Pfam PF00448 SRP54-type protein, GTPase domain 101 297 2.2E-80 T 13-10-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 COP00_11600 abfac52bae080f372c3bc8e074883138 360 Gene3D G3DSA:1.10.101.10 285 359 2.1E-19 T 13-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 COP00_11600 abfac52bae080f372c3bc8e074883138 360 Gene3D G3DSA:1.10.101.10 187 263 3.2E-21 T 13-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 COP00_11600 abfac52bae080f372c3bc8e074883138 360 Pfam PF01471 Putative peptidoglycan binding domain 201 259 1.8E-14 T 13-10-2018 IPR002477 Peptidoglycan binding-like COP00_11600 abfac52bae080f372c3bc8e074883138 360 Pfam PF01471 Putative peptidoglycan binding domain 294 355 7.0E-18 T 13-10-2018 IPR002477 Peptidoglycan binding-like COP00_11600 abfac52bae080f372c3bc8e074883138 360 SUPERFAMILY SSF47090 286 355 2.46E-18 T 13-10-2018 IPR036365 PGBD-like superfamily COP00_11600 abfac52bae080f372c3bc8e074883138 360 Gene3D G3DSA:3.40.80.10 3 186 7.0E-47 T 13-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 COP00_11600 abfac52bae080f372c3bc8e074883138 360 SUPERFAMILY SSF47090 192 259 3.92E-18 T 13-10-2018 IPR036365 PGBD-like superfamily COP00_11600 abfac52bae080f372c3bc8e074883138 360 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 24 153 3.1E-23 T 13-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 COP00_11600 abfac52bae080f372c3bc8e074883138 360 SMART SM00644 14 168 2.5E-38 T 13-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 COP00_11600 abfac52bae080f372c3bc8e074883138 360 SUPERFAMILY SSF55846 3 168 7.2E-41 T 13-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 COP00_09695 3f3460b9021ccd43c7b808290cab0571 194 Gene3D G3DSA:3.40.50.150 1 194 2.6E-72 T 13-10-2018 COP00_09695 3f3460b9021ccd43c7b808290cab0571 194 SUPERFAMILY SSF53335 15 150 8.36E-23 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase COP00_09695 3f3460b9021ccd43c7b808290cab0571 194 Pfam PF06962 Putative rRNA methylase 48 187 2.5E-49 T 13-10-2018 IPR010719 Putative rRNA methylase COP00_05700 5c1b656af1b947f3c85955118a5ff252 190 Gene3D G3DSA:1.10.286.10 1 54 7.1E-26 T 13-10-2018 COP00_05700 5c1b656af1b947f3c85955118a5ff252 190 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 5 187 43.328 T 13-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 COP00_05700 5c1b656af1b947f3c85955118a5ff252 190 SUPERFAMILY SSF55620 3 189 1.56E-80 T 13-10-2018 COP00_05700 5c1b656af1b947f3c85955118a5ff252 190 Gene3D G3DSA:3.30.1130.10 55 189 4.2E-62 T 13-10-2018 COP00_05700 5c1b656af1b947f3c85955118a5ff252 190 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 65 81 - T 13-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 COP00_05700 5c1b656af1b947f3c85955118a5ff252 190 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 114 124 - T 13-10-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 COP00_05700 5c1b656af1b947f3c85955118a5ff252 190 Pfam PF01227 GTP cyclohydrolase I 9 186 2.0E-82 T 13-10-2018 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 COP00_05700 5c1b656af1b947f3c85955118a5ff252 190 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 9 188 3.0E-83 T 13-10-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 COP00_14045 2e257cfd599ae56970e96946b55384c0 149 Gene3D G3DSA:2.40.128.20 5 149 3.6E-48 T 13-10-2018 IPR012674 Calycin COP00_14045 2e257cfd599ae56970e96946b55384c0 149 Pfam PF09148 Domain of unknown function (DUF1934) 16 141 8.1E-34 T 13-10-2018 IPR015231 Protein of unknown function DUF1934 COP00_14045 2e257cfd599ae56970e96946b55384c0 149 SUPERFAMILY SSF50814 5 145 8.93E-43 T 13-10-2018 IPR012674 Calycin COP00_22620 1de826cee3bf9adb59e0e3854860440c 589 Pfam PF04183 IucA / IucC family 139 374 2.8E-56 T 13-10-2018 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal GO:0019290 COP00_22620 1de826cee3bf9adb59e0e3854860440c 589 Gene3D G3DSA:1.10.510.40 364 558 4.9E-12 T 13-10-2018 COP00_22620 1de826cee3bf9adb59e0e3854860440c 589 Pfam PF06276 Ferric iron reductase FhuF-like transporter 405 564 1.4E-34 T 13-10-2018 IPR022770 Ferric iron reductase FhuF domain COP00_03210 2c999986d696afd26283f5d7212da687 132 SUPERFAMILY SSF159006 2 123 1.7E-21 T 13-10-2018 COP00_03210 2c999986d696afd26283f5d7212da687 132 Gene3D G3DSA:2.30.30.290 56 131 7.9E-14 T 13-10-2018 IPR023385 YopX-like, C-terminal COP00_03210 2c999986d696afd26283f5d7212da687 132 Pfam PF09643 YopX protein 52 122 1.6E-19 T 13-10-2018 IPR019096 YopX protein COP00_00915 37d883bc480a88a91651171b02df466f 259 SUPERFAMILY SSF88659 115 191 1.31E-17 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like COP00_00915 37d883bc480a88a91651171b02df466f 259 PRINTS PR00046 Major sigma-70 factor signature 67 80 1.7E-12 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 COP00_00915 37d883bc480a88a91651171b02df466f 259 PRINTS PR00046 Major sigma-70 factor signature 243 254 1.7E-12 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 COP00_00915 37d883bc480a88a91651171b02df466f 259 PRINTS PR00046 Major sigma-70 factor signature 228 243 1.7E-12 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 COP00_00915 37d883bc480a88a91651171b02df466f 259 PRINTS PR00046 Major sigma-70 factor signature 91 99 1.7E-12 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 COP00_00915 37d883bc480a88a91651171b02df466f 259 PRINTS PR00046 Major sigma-70 factor signature 211 223 1.7E-12 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 COP00_00915 37d883bc480a88a91651171b02df466f 259 TIGRFAM TIGR02980 SigBFG: RNA polymerase sigma-70 factor, sigma-B/F/G subfamily 37 258 8.9E-85 T 13-10-2018 IPR014322 RNA polymerase sigma-B/F/G type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 COP00_00915 37d883bc480a88a91651171b02df466f 259 Gene3D G3DSA:1.10.10.10 112 165 5.1E-14 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_00915 37d883bc480a88a91651171b02df466f 259 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 38 257 2.1E-35 T 13-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 COP00_00915 37d883bc480a88a91651171b02df466f 259 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 67 80 - T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 COP00_00915 37d883bc480a88a91651171b02df466f 259 TIGRFAM TIGR02850 spore_sigG: RNA polymerase sigma-G factor 4 258 3.9E-157 T 13-10-2018 IPR014212 RNA polymerase sigma-G type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 COP00_00915 37d883bc480a88a91651171b02df466f 259 Pfam PF04545 Sigma-70, region 4 208 254 2.7E-13 T 13-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 COP00_00915 37d883bc480a88a91651171b02df466f 259 SUPERFAMILY SSF88946 12 111 8.37E-34 T 13-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 COP00_00915 37d883bc480a88a91651171b02df466f 259 PIRSF PIRSF000770 11 259 3.8E-32 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 COP00_00915 37d883bc480a88a91651171b02df466f 259 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 228 254 - T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 COP00_00915 37d883bc480a88a91651171b02df466f 259 SUPERFAMILY SSF88659 176 257 2.24E-16 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like COP00_00915 37d883bc480a88a91651171b02df466f 259 Gene3D G3DSA:1.20.120.1810 3 111 8.8E-28 T 13-10-2018 COP00_00915 37d883bc480a88a91651171b02df466f 259 Pfam PF04539 Sigma-70 region 3 125 176 2.5E-8 T 13-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 COP00_00915 37d883bc480a88a91651171b02df466f 259 Pfam PF04542 Sigma-70 region 2 43 111 4.6E-17 T 13-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 COP00_00915 37d883bc480a88a91651171b02df466f 259 Gene3D G3DSA:1.10.10.10 186 259 7.8E-10 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_03655 c0b04efb985da98077806534bfd4fc6b 168 SUPERFAMILY SSF52833 4 166 5.0E-38 T 13-10-2018 IPR036249 Thioredoxin-like superfamily COP00_03655 c0b04efb985da98077806534bfd4fc6b 168 Pfam PF00578 AhpC/TSA family 35 151 7.1E-29 T 13-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 COP00_03655 c0b04efb985da98077806534bfd4fc6b 168 Gene3D G3DSA:3.40.30.10 21 167 2.2E-43 T 13-10-2018 COP00_21725 b6a90cb918556b5b19c9c108edf26a19 172 Gene3D G3DSA:3.40.50.360 1 172 2.7E-47 T 13-10-2018 IPR029039 Flavoprotein-like superfamily COP00_21725 b6a90cb918556b5b19c9c108edf26a19 172 Pfam PF03358 NADPH-dependent FMN reductase 1 136 3.9E-29 T 13-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 COP00_21725 b6a90cb918556b5b19c9c108edf26a19 172 SUPERFAMILY SSF52218 1 168 9.78E-40 T 13-10-2018 IPR029039 Flavoprotein-like superfamily COP00_22140 78f5c826ba6dc20b17a76bceb11ffabd 206 SUPERFAMILY SSF46785 21 130 1.5E-22 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_22140 78f5c826ba6dc20b17a76bceb11ffabd 206 ProSitePatterns PS01117 MarR-type HTH domain signature. 76 110 - T 13-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site COP00_22140 78f5c826ba6dc20b17a76bceb11ffabd 206 SMART SM00347 37 137 1.6E-21 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 COP00_22140 78f5c826ba6dc20b17a76bceb11ffabd 206 Gene3D G3DSA:1.10.10.10 1 167 5.4E-48 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_22140 78f5c826ba6dc20b17a76bceb11ffabd 206 Hamap MF_01911 HTH-type transcriptional regulator Hpr [hpr]. 2 185 49.614 T 13-10-2018 IPR023488 HTH-type transcriptional regulator Hpr COP00_22140 78f5c826ba6dc20b17a76bceb11ffabd 206 Pfam PF01047 MarR family 44 101 1.4E-14 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 COP00_19235 a92acbe70953a0c3b95bf14d21c496f0 293 Gene3D G3DSA:1.10.10.60 238 292 2.8E-15 T 13-10-2018 COP00_19235 a92acbe70953a0c3b95bf14d21c496f0 293 SUPERFAMILY SSF46689 188 238 4.93E-8 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 COP00_19235 a92acbe70953a0c3b95bf14d21c496f0 293 Pfam PF12833 Helix-turn-helix domain 210 287 1.8E-16 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 COP00_19235 a92acbe70953a0c3b95bf14d21c496f0 293 SUPERFAMILY SSF51215 35 163 6.67E-15 T 13-10-2018 IPR037923 Transcription regulator HTH-like COP00_19235 a92acbe70953a0c3b95bf14d21c496f0 293 Gene3D G3DSA:1.10.10.60 185 237 1.2E-11 T 13-10-2018 COP00_19235 a92acbe70953a0c3b95bf14d21c496f0 293 Gene3D G3DSA:2.60.120.10 4 103 8.0E-13 T 13-10-2018 IPR014710 RmlC-like jelly roll fold COP00_19235 a92acbe70953a0c3b95bf14d21c496f0 293 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 241 283 - T 13-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 COP00_19235 a92acbe70953a0c3b95bf14d21c496f0 293 SUPERFAMILY SSF46689 240 288 4.03E-11 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 COP00_19235 a92acbe70953a0c3b95bf14d21c496f0 293 SMART SM00342 204 287 3.3E-26 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 COP00_19235 a92acbe70953a0c3b95bf14d21c496f0 293 Pfam PF02311 AraC-like ligand binding domain 38 103 1.5E-11 T 13-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 COP00_19235 a92acbe70953a0c3b95bf14d21c496f0 293 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 271 287 2.7E-5 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 COP00_19235 a92acbe70953a0c3b95bf14d21c496f0 293 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 256 271 2.7E-5 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 COP00_22950 beff46e531424901954ab3f450983336 246 Gene3D G3DSA:3.60.21.10 1 241 1.8E-60 T 13-10-2018 IPR029052 Metallo-dependent phosphatase-like COP00_22950 beff46e531424901954ab3f450983336 246 SUPERFAMILY SSF56300 1 224 8.92E-39 T 13-10-2018 COP00_22950 beff46e531424901954ab3f450983336 246 Pfam PF00149 Calcineurin-like phosphoesterase 1 195 1.2E-11 T 13-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 COP00_08360 5f15d50f1a6ef78e1297958752a84a79 240 Gene3D G3DSA:1.10.10.200 1 81 7.3E-35 T 13-10-2018 IPR017856 Integrase-like, N-terminal COP00_08360 5f15d50f1a6ef78e1297958752a84a79 240 Pfam PF01709 Transcriptional regulator 5 239 4.7E-101 T 13-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 COP00_08360 5f15d50f1a6ef78e1297958752a84a79 240 Gene3D G3DSA:3.30.70.980 85 238 4.1E-57 T 13-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 COP00_08360 5f15d50f1a6ef78e1297958752a84a79 240 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 239 8.5E-107 T 13-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 COP00_08360 5f15d50f1a6ef78e1297958752a84a79 240 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 3 240 37.098 T 13-10-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 COP00_08360 5f15d50f1a6ef78e1297958752a84a79 240 Gene3D G3DSA:3.30.70.980 134 205 4.1E-57 T 13-10-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 COP00_08360 5f15d50f1a6ef78e1297958752a84a79 240 SUPERFAMILY SSF75625 3 239 8.37E-97 T 13-10-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 COP00_00230 d8faa3e3c774ec2ab675d3e1bedfcbcd 290 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 7 20 - T 13-10-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 COP00_00230 d8faa3e3c774ec2ab675d3e1bedfcbcd 290 SUPERFAMILY SSF48179 164 288 1.25E-38 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 COP00_00230 d8faa3e3c774ec2ab675d3e1bedfcbcd 290 Gene3D G3DSA:3.40.50.720 1 163 1.4E-53 T 13-10-2018 COP00_00230 d8faa3e3c774ec2ab675d3e1bedfcbcd 290 PIRSF PIRSF000103 1 289 3.0E-70 T 13-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 COP00_00230 d8faa3e3c774ec2ab675d3e1bedfcbcd 290 Gene3D G3DSA:1.10.1040.10 164 290 2.8E-40 T 13-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 COP00_00230 d8faa3e3c774ec2ab675d3e1bedfcbcd 290 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 166 286 1.9E-35 T 13-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 COP00_00230 d8faa3e3c774ec2ab675d3e1bedfcbcd 290 SUPERFAMILY SSF51735 3 164 1.65E-49 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily COP00_00230 d8faa3e3c774ec2ab675d3e1bedfcbcd 290 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 4 161 4.2E-53 T 13-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 COP00_00650 37f67713bb25d39573d25a005eccc8d2 442 Pfam PF13638 PIN domain 5 147 7.9E-34 T 13-10-2018 IPR002716 PIN domain COP00_00650 37f67713bb25d39573d25a005eccc8d2 442 Gene3D G3DSA:3.40.50.1010 2 149 2.8E-21 T 13-10-2018 COP00_00650 37f67713bb25d39573d25a005eccc8d2 442 Pfam PF02562 PhoH-like protein 233 426 2.9E-53 T 13-10-2018 IPR003714 PhoH-like protein GO:0005524 COP00_00650 37f67713bb25d39573d25a005eccc8d2 442 SUPERFAMILY SSF52540 23 421 7.43E-27 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_00650 37f67713bb25d39573d25a005eccc8d2 442 Gene3D G3DSA:3.40.50.300 231 441 1.5E-67 T 13-10-2018 COP00_00650 37f67713bb25d39573d25a005eccc8d2 442 SMART SM00670 3 135 7.1E-24 T 13-10-2018 IPR002716 PIN domain COP00_10640 d6f28be164d543868a711a2e2e14ad57 496 PRINTS PR00481 Cytosol aminopeptidase signature 256 273 5.4E-52 T 13-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 COP00_10640 d6f28be164d543868a711a2e2e14ad57 496 PRINTS PR00481 Cytosol aminopeptidase signature 278 299 5.4E-52 T 13-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 COP00_10640 d6f28be164d543868a711a2e2e14ad57 496 PRINTS PR00481 Cytosol aminopeptidase signature 315 336 5.4E-52 T 13-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 COP00_10640 d6f28be164d543868a711a2e2e14ad57 496 PRINTS PR00481 Cytosol aminopeptidase signature 365 380 5.4E-52 T 13-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 COP00_10640 d6f28be164d543868a711a2e2e14ad57 496 PRINTS PR00481 Cytosol aminopeptidase signature 337 357 5.4E-52 T 13-10-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 COP00_10640 d6f28be164d543868a711a2e2e14ad57 496 SUPERFAMILY SSF53187 176 490 2.04E-112 T 13-10-2018 COP00_10640 d6f28be164d543868a711a2e2e14ad57 496 Gene3D G3DSA:3.40.220.10 5 154 1.8E-35 T 13-10-2018 COP00_10640 d6f28be164d543868a711a2e2e14ad57 496 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 1 494 35.767 T 13-10-2018 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 COP00_10640 d6f28be164d543868a711a2e2e14ad57 496 Gene3D G3DSA:3.40.630.10 166 492 3.0E-129 T 13-10-2018 COP00_10640 d6f28be164d543868a711a2e2e14ad57 496 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 16 142 2.9E-25 T 13-10-2018 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 COP00_10640 d6f28be164d543868a711a2e2e14ad57 496 SUPERFAMILY SSF52949 6 177 1.47E-36 T 13-10-2018 COP00_10640 d6f28be164d543868a711a2e2e14ad57 496 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 341 348 - T 13-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 COP00_10640 d6f28be164d543868a711a2e2e14ad57 496 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 180 486 9.8E-118 T 13-10-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 COP00_06725 f8335971eed46ca77d65506a287da285 448 Pfam PF02347 Glycine cleavage system P-protein 3 443 9.6E-171 T 13-10-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 COP00_06725 f8335971eed46ca77d65506a287da285 448 Hamap MF_00712 Probable glycine dehydrogenase (decarboxylating) subunit 1 [gcvPA]. 3 446 50.205 T 13-10-2018 IPR023010 Probable glycine dehydrogenase (decarboxylating) subunit 1 GO:0004375|GO:0009116 KEGG: 00260+1.4.4.2 COP00_06725 f8335971eed46ca77d65506a287da285 448 PIRSF PIRSF006815 3 447 8.7E-189 T 13-10-2018 IPR023010 Probable glycine dehydrogenase (decarboxylating) subunit 1 GO:0004375|GO:0009116 KEGG: 00260+1.4.4.2 COP00_06725 f8335971eed46ca77d65506a287da285 448 SUPERFAMILY SSF53383 3 443 8.81E-118 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase COP00_06725 f8335971eed46ca77d65506a287da285 448 Gene3D G3DSA:3.40.640.10 84 349 1.4E-162 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 COP00_06725 f8335971eed46ca77d65506a287da285 448 Gene3D G3DSA:3.90.1150.10 73 443 1.4E-162 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 COP00_09495 7e2943d422b797f01afbe68e1445f439 236 SUPERFAMILY SSF55174 1 59 7.46E-13 T 13-10-2018 COP00_09495 7e2943d422b797f01afbe68e1445f439 236 Gene3D G3DSA:3.10.290.10 1 57 1.1E-17 T 13-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 COP00_09495 7e2943d422b797f01afbe68e1445f439 236 Pfam PF00849 RNA pseudouridylate synthase 62 195 1.5E-17 T 13-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 COP00_09495 7e2943d422b797f01afbe68e1445f439 236 Pfam PF01479 S4 domain 1 44 2.1E-9 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 COP00_09495 7e2943d422b797f01afbe68e1445f439 236 Gene3D G3DSA:3.30.70.1560 129 213 1.2E-55 T 13-10-2018 COP00_09495 7e2943d422b797f01afbe68e1445f439 236 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 100 114 - T 13-10-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 COP00_09495 7e2943d422b797f01afbe68e1445f439 236 Gene3D G3DSA:3.30.70.580 62 231 1.2E-55 T 13-10-2018 COP00_09495 7e2943d422b797f01afbe68e1445f439 236 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 66 228 2.3E-46 T 13-10-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 COP00_09495 7e2943d422b797f01afbe68e1445f439 236 SMART SM00363 1 59 4.2E-9 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 COP00_09495 7e2943d422b797f01afbe68e1445f439 236 SUPERFAMILY SSF55120 45 234 1.54E-43 T 13-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 COP00_01190 227a4d036c8664465699e5c47126dc3f 702 SMART SM00490 508 593 2.6E-20 T 13-10-2018 IPR001650 Helicase, C-terminal COP00_01190 227a4d036c8664465699e5c47126dc3f 702 Gene3D G3DSA:3.40.50.300 461 633 1.5E-58 T 13-10-2018 COP00_01190 227a4d036c8664465699e5c47126dc3f 702 Gene3D G3DSA:3.40.50.300 215 454 9.4E-91 T 13-10-2018 COP00_01190 227a4d036c8664465699e5c47126dc3f 702 SUPERFAMILY SSF52540 394 649 9.35E-44 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_01190 227a4d036c8664465699e5c47126dc3f 702 SUPERFAMILY SSF50249 23 188 1.06E-29 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold COP00_01190 227a4d036c8664465699e5c47126dc3f 702 Pfam PF17191 RecG wedge domain 30 184 7.0E-16 T 13-10-2018 IPR033454 RecG, wedge domain COP00_01190 227a4d036c8664465699e5c47126dc3f 702 Pfam PF00271 Helicase conserved C-terminal domain 472 592 7.0E-21 T 13-10-2018 IPR001650 Helicase, C-terminal COP00_01190 227a4d036c8664465699e5c47126dc3f 702 Pfam PF00270 DEAD/DEAH box helicase 278 435 6.0E-20 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 COP00_01190 227a4d036c8664465699e5c47126dc3f 702 SMART SM00487 273 463 4.7E-35 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain COP00_01190 227a4d036c8664465699e5c47126dc3f 702 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 46 668 6.3E-255 T 13-10-2018 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 COP00_01190 227a4d036c8664465699e5c47126dc3f 702 SUPERFAMILY SSF52540 193 456 1.41E-63 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_01190 227a4d036c8664465699e5c47126dc3f 702 Gene3D G3DSA:2.40.50.140 66 157 3.2E-9 T 13-10-2018 COP00_21675 1e3247f58dd9bf27da4b2ca6547591b9 185 PIRSF PIRSF016897 1 184 2.0E-66 T 13-10-2018 IPR006699 Glycerol uptake operon antiterminator GO:0006071|GO:0006355 COP00_21675 1e3247f58dd9bf27da4b2ca6547591b9 185 Gene3D G3DSA:3.20.20.400 1 184 5.9E-69 T 13-10-2018 IPR035928 GlpP-like superfamily COP00_21675 1e3247f58dd9bf27da4b2ca6547591b9 185 SUPERFAMILY SSF110391 8 181 1.14E-59 T 13-10-2018 IPR035928 GlpP-like superfamily COP00_21675 1e3247f58dd9bf27da4b2ca6547591b9 185 Pfam PF04309 Glycerol-3-phosphate responsive antiterminator 8 180 6.4E-63 T 13-10-2018 IPR006699 Glycerol uptake operon antiterminator GO:0006071|GO:0006355 COP00_10705 f6051e5474841555b3f1592e8bf89373 284 Pfam PF01678 Diaminopimelate epimerase 6 129 5.5E-34 T 13-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 COP00_10705 f6051e5474841555b3f1592e8bf89373 284 Pfam PF01678 Diaminopimelate epimerase 161 276 3.5E-34 T 13-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 COP00_10705 f6051e5474841555b3f1592e8bf89373 284 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 5 282 8.5E-98 T 13-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 COP00_10705 f6051e5474841555b3f1592e8bf89373 284 Gene3D G3DSA:3.10.310.10 126 274 5.4E-112 T 13-10-2018 COP00_10705 f6051e5474841555b3f1592e8bf89373 284 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 67 81 - T 13-10-2018 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 COP00_10705 f6051e5474841555b3f1592e8bf89373 284 SUPERFAMILY SSF54506 2 280 5.83E-50 T 13-10-2018 COP00_10705 f6051e5474841555b3f1592e8bf89373 284 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 4 284 38.562 T 13-10-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 COP00_10705 f6051e5474841555b3f1592e8bf89373 284 Gene3D G3DSA:3.10.310.10 6 280 5.4E-112 T 13-10-2018 COP00_07380 222a1729969e24455e2e14c01bcb8aa5 198 Gene3D G3DSA:1.10.150.280 127 197 8.9E-26 T 13-10-2018 COP00_07380 222a1729969e24455e2e14c01bcb8aa5 198 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 133 196 1.0E-29 T 13-10-2018 IPR004509 Competence protein ComEA, helix-hairpin-helix domain COP00_07380 222a1729969e24455e2e14c01bcb8aa5 198 SUPERFAMILY SSF47781 128 197 8.67E-32 T 13-10-2018 IPR010994 RuvA domain 2-like COP00_07380 222a1729969e24455e2e14c01bcb8aa5 198 Pfam PF10531 SLBB domain 64 119 1.9E-12 T 13-10-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 COP00_07380 222a1729969e24455e2e14c01bcb8aa5 198 SMART SM00278 175 194 0.19 T 13-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 COP00_07380 222a1729969e24455e2e14c01bcb8aa5 198 SMART SM00278 145 164 0.0057 T 13-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 COP00_07380 222a1729969e24455e2e14c01bcb8aa5 198 Pfam PF12836 Helix-hairpin-helix motif 134 195 1.2E-25 T 13-10-2018 COP00_07380 222a1729969e24455e2e14c01bcb8aa5 198 SUPERFAMILY SSF142984 65 98 6.67E-5 T 13-10-2018 COP00_21355 29e868c9af862437e6db04dd4e9fdb0d 941 SMART SM00631 183 481 4.1E-4 T 13-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 COP00_21355 29e868c9af862437e6db04dd4e9fdb0d 941 Gene3D G3DSA:3.40.630.10 180 500 2.1E-26 T 13-10-2018 COP00_21355 29e868c9af862437e6db04dd4e9fdb0d 941 SUPERFAMILY SSF53187 179 478 2.79E-31 T 13-10-2018 COP00_21355 29e868c9af862437e6db04dd4e9fdb0d 941 Pfam PF00246 Zinc carboxypeptidase 197 446 1.5E-9 T 13-10-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 COP00_21355 29e868c9af862437e6db04dd4e9fdb0d 941 SUPERFAMILY SSF52317 758 898 6.64E-5 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like COP00_08705 49482836c7fd1fb08a42800d2f18ebbd 147 Pfam PF01047 MarR family 37 95 9.6E-20 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 COP00_08705 49482836c7fd1fb08a42800d2f18ebbd 147 PRINTS PR00598 Bacterial regulatory protein MarR family signature 90 106 4.4E-10 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 COP00_08705 49482836c7fd1fb08a42800d2f18ebbd 147 PRINTS PR00598 Bacterial regulatory protein MarR family signature 120 140 4.4E-10 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 COP00_08705 49482836c7fd1fb08a42800d2f18ebbd 147 PRINTS PR00598 Bacterial regulatory protein MarR family signature 71 86 4.4E-10 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 COP00_08705 49482836c7fd1fb08a42800d2f18ebbd 147 SUPERFAMILY SSF46785 12 145 3.31E-32 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_08705 49482836c7fd1fb08a42800d2f18ebbd 147 Gene3D G3DSA:1.10.10.10 2 147 4.3E-38 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_08705 49482836c7fd1fb08a42800d2f18ebbd 147 SMART SM00347 30 130 4.3E-24 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 COP00_15000 98a8c47ebb95c529e864bca111dd0a01 324 SUPERFAMILY SSF53822 59 306 4.71E-65 T 13-10-2018 IPR028082 Periplasmic binding protein-like I COP00_15000 98a8c47ebb95c529e864bca111dd0a01 324 Pfam PF00356 Bacterial regulatory proteins, lacI family 5 49 7.3E-22 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 COP00_15000 98a8c47ebb95c529e864bca111dd0a01 324 Gene3D G3DSA:3.40.50.2300 157 283 7.2E-66 T 13-10-2018 COP00_15000 98a8c47ebb95c529e864bca111dd0a01 324 Gene3D G3DSA:1.10.260.40 1 60 1.3E-23 T 13-10-2018 COP00_15000 98a8c47ebb95c529e864bca111dd0a01 324 ProSitePatterns PS00356 LacI-type HTH domain signature. 5 23 - T 13-10-2018 COP00_15000 98a8c47ebb95c529e864bca111dd0a01 324 Gene3D G3DSA:3.40.50.2300 63 303 7.2E-66 T 13-10-2018 COP00_15000 98a8c47ebb95c529e864bca111dd0a01 324 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 4 14 1.2E-5 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 COP00_15000 98a8c47ebb95c529e864bca111dd0a01 324 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 14 24 1.2E-5 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 COP00_15000 98a8c47ebb95c529e864bca111dd0a01 324 Pfam PF13377 Periplasmic binding protein-like domain 166 324 7.9E-25 T 13-10-2018 COP00_15000 98a8c47ebb95c529e864bca111dd0a01 324 SMART SM00354 2 72 9.3E-34 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 COP00_15000 98a8c47ebb95c529e864bca111dd0a01 324 SUPERFAMILY SSF47413 2 61 4.82E-20 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 COP00_03225 ab5a9d56264e41d19ee3f2af7155a96a 85 Pfam PF11195 Protein of unknown function (DUF2829) 3 84 2.1E-24 T 13-10-2018 IPR021361 Protein of unknown function DUF2829 COP00_11740 ab5a9d56264e41d19ee3f2af7155a96a 85 Pfam PF11195 Protein of unknown function (DUF2829) 3 84 2.1E-24 T 13-10-2018 IPR021361 Protein of unknown function DUF2829 COP00_19655 ab5a9d56264e41d19ee3f2af7155a96a 85 Pfam PF11195 Protein of unknown function (DUF2829) 3 84 2.1E-24 T 13-10-2018 IPR021361 Protein of unknown function DUF2829 COP00_10315 e5f92394a8606a0d51b8fed2a6247f4a 450 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 1 435 26.868 T 13-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 COP00_10315 e5f92394a8606a0d51b8fed2a6247f4a 450 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 202 215 - T 13-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 COP00_10315 e5f92394a8606a0d51b8fed2a6247f4a 450 Gene3D G3DSA:3.40.50.10490 227 417 9.1E-150 T 13-10-2018 COP00_10315 e5f92394a8606a0d51b8fed2a6247f4a 450 Pfam PF00342 Phosphoglucose isomerase 355 426 1.3E-5 T 13-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 COP00_10315 e5f92394a8606a0d51b8fed2a6247f4a 450 Pfam PF00342 Phosphoglucose isomerase 76 295 2.3E-20 T 13-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 COP00_10315 e5f92394a8606a0d51b8fed2a6247f4a 450 Gene3D G3DSA:3.40.50.10490 58 226 9.1E-150 T 13-10-2018 COP00_10315 e5f92394a8606a0d51b8fed2a6247f4a 450 PRINTS PR00662 Glucose-6-phosphate isomerase signature 76 95 7.4E-29 T 13-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 COP00_10315 e5f92394a8606a0d51b8fed2a6247f4a 450 PRINTS PR00662 Glucose-6-phosphate isomerase signature 394 408 7.4E-29 T 13-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 COP00_10315 e5f92394a8606a0d51b8fed2a6247f4a 450 PRINTS PR00662 Glucose-6-phosphate isomerase signature 408 421 7.4E-29 T 13-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 COP00_10315 e5f92394a8606a0d51b8fed2a6247f4a 450 PRINTS PR00662 Glucose-6-phosphate isomerase signature 198 216 7.4E-29 T 13-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 COP00_10315 e5f92394a8606a0d51b8fed2a6247f4a 450 PRINTS PR00662 Glucose-6-phosphate isomerase signature 376 394 7.4E-29 T 13-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 COP00_10315 e5f92394a8606a0d51b8fed2a6247f4a 450 PRINTS PR00662 Glucose-6-phosphate isomerase signature 273 294 7.4E-29 T 13-10-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 COP00_10315 e5f92394a8606a0d51b8fed2a6247f4a 450 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 408 425 - T 13-10-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 COP00_10315 e5f92394a8606a0d51b8fed2a6247f4a 450 Gene3D G3DSA:3.40.50.10490 1 57 7.0E-18 T 13-10-2018 COP00_10315 e5f92394a8606a0d51b8fed2a6247f4a 450 SUPERFAMILY SSF53697 5 447 1.07E-145 T 13-10-2018 COP00_22835 0f7db9ba256c1431ccb00385520de61c 329 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 10 19 - T 13-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 COP00_22835 0f7db9ba256c1431ccb00385520de61c 329 Gene3D G3DSA:3.40.50.620 4 323 1.9E-139 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold COP00_22835 0f7db9ba256c1431ccb00385520de61c 329 SUPERFAMILY SSF52374 2 324 2.53E-100 T 13-10-2018 COP00_22835 0f7db9ba256c1431ccb00385520de61c 329 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 139 160 3.1E-29 T 13-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 COP00_22835 0f7db9ba256c1431ccb00385520de61c 329 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 64 83 3.1E-29 T 13-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 COP00_22835 0f7db9ba256c1431ccb00385520de61c 329 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 14 30 3.1E-29 T 13-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 COP00_22835 0f7db9ba256c1431ccb00385520de61c 329 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 192 202 3.1E-29 T 13-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 COP00_22835 0f7db9ba256c1431ccb00385520de61c 329 Gene3D G3DSA:1.10.240.10 183 293 1.9E-139 T 13-10-2018 COP00_22835 0f7db9ba256c1431ccb00385520de61c 329 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 2 324 5.7E-125 T 13-10-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 COP00_22835 0f7db9ba256c1431ccb00385520de61c 329 Pfam PF00579 tRNA synthetases class I (W and Y) 3 280 5.3E-84 T 13-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 COP00_22835 0f7db9ba256c1431ccb00385520de61c 329 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 1 325 42.666 T 13-10-2018 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2|Reactome: R-HSA-379726 COP00_13555 b5639e250b5ce0992f62c923671269f0 279 SUPERFAMILY SSF117143 122 236 1.57E-9 T 13-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like COP00_13555 b5639e250b5ce0992f62c923671269f0 279 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 198 273 2.3E-17 T 13-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain COP00_13555 b5639e250b5ce0992f62c923671269f0 279 Pfam PF00460 Flagella basal body rod protein 5 35 1.6E-13 T 13-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 COP00_13555 b5639e250b5ce0992f62c923671269f0 279 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 13-10-2018 IPR019776 Flagellar basal body rod protein, conserved site COP00_11540 e98fea3878d8c6d6e2dfa95e66666bea 322 SMART SM00450 115 216 1.0E-19 T 13-10-2018 IPR001763 Rhodanese-like domain COP00_11540 e98fea3878d8c6d6e2dfa95e66666bea 322 SUPERFAMILY SSF52821 88 246 2.19E-35 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily COP00_11540 e98fea3878d8c6d6e2dfa95e66666bea 322 Gene3D G3DSA:3.30.70.100 1 97 1.3E-32 T 13-10-2018 COP00_11540 e98fea3878d8c6d6e2dfa95e66666bea 322 Pfam PF12368 Rhodanase C-terminal 222 288 3.0E-14 T 13-10-2018 IPR022111 Rhodanase, C-terminal COP00_11540 e98fea3878d8c6d6e2dfa95e66666bea 322 Hamap MF_00469 UPF0176 protein YceA [yceA]. 3 267 40.777 T 13-10-2018 IPR020936 Uncharacterised protein family UPF0176 COP00_11540 e98fea3878d8c6d6e2dfa95e66666bea 322 Pfam PF00581 Rhodanese-like domain 116 210 9.0E-11 T 13-10-2018 IPR001763 Rhodanese-like domain COP00_11540 e98fea3878d8c6d6e2dfa95e66666bea 322 Gene3D G3DSA:3.40.250.10 102 250 3.0E-46 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily COP00_18775 0111999bb4d30584cd7a53a1b9951737 379 Gene3D G3DSA:3.40.50.720 2 204 5.6E-74 T 13-10-2018 COP00_18775 0111999bb4d30584cd7a53a1b9951737 379 PRINTS PR00084 Mannitol dehydrogenase signature 115 128 1.2E-19 T 13-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 COP00_18775 0111999bb4d30584cd7a53a1b9951737 379 PRINTS PR00084 Mannitol dehydrogenase signature 151 164 1.2E-19 T 13-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 COP00_18775 0111999bb4d30584cd7a53a1b9951737 379 PRINTS PR00084 Mannitol dehydrogenase signature 3 13 1.2E-19 T 13-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 COP00_18775 0111999bb4d30584cd7a53a1b9951737 379 PRINTS PR00084 Mannitol dehydrogenase signature 169 184 1.2E-19 T 13-10-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 COP00_18775 0111999bb4d30584cd7a53a1b9951737 379 Hamap MF_00196 Mannitol-1-phosphate 5-dehydrogenase [mtlD]. 1 377 40.966 T 13-10-2018 IPR023028 Mannitol-1-phosphate 5-dehydrogenase GO:0008926|GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 COP00_18775 0111999bb4d30584cd7a53a1b9951737 379 SUPERFAMILY SSF48179 203 377 1.7E-40 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 COP00_18775 0111999bb4d30584cd7a53a1b9951737 379 Gene3D G3DSA:1.10.1040.10 206 379 3.3E-58 T 13-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 COP00_18775 0111999bb4d30584cd7a53a1b9951737 379 ProSitePatterns PS00974 Mannitol dehydrogenases signature. 151 163 - T 13-10-2018 IPR023027 Mannitol dehydrogenase, conserved site GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 COP00_18775 0111999bb4d30584cd7a53a1b9951737 379 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 2 124 1.0E-26 T 13-10-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 COP00_18775 0111999bb4d30584cd7a53a1b9951737 379 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 151 371 3.9E-57 T 13-10-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 COP00_18775 0111999bb4d30584cd7a53a1b9951737 379 SUPERFAMILY SSF51735 3 201 2.5E-46 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily COP00_13855 d5c0972614275ce8a11a0adf9f576bea 180 Pfam PF04260 Protein of unknown function (DUF436) 9 177 1.8E-76 T 13-10-2018 IPR006340 Protein of unknown function DUF436 COP00_13855 d5c0972614275ce8a11a0adf9f576bea 180 ProDom PD102102 UPF0340 3D-STRUCTURE YWLG SMU.87 STU1894 BT9727_4999 TRANSFERASE TTE0860 SPY1898/M5005_SPY1614 TT1679 13 180 5.0E-77 T 13-10-2018 IPR006340 Protein of unknown function DUF436 COP00_13855 d5c0972614275ce8a11a0adf9f576bea 180 Gene3D G3DSA:3.40.50.10360 1 180 8.6E-79 T 13-10-2018 IPR028345 Aminoglycoside 3-N-acetyltransferase-like COP00_13855 d5c0972614275ce8a11a0adf9f576bea 180 TIGRFAM TIGR01440 TIGR01440: TIGR01440 family protein 9 177 5.5E-70 T 13-10-2018 IPR006340 Protein of unknown function DUF436 COP00_13855 d5c0972614275ce8a11a0adf9f576bea 180 PIRSF PIRSF007510 1 180 2.5E-79 T 13-10-2018 IPR006340 Protein of unknown function DUF436 COP00_13855 d5c0972614275ce8a11a0adf9f576bea 180 SUPERFAMILY SSF110710 1 179 2.28E-77 T 13-10-2018 IPR028345 Aminoglycoside 3-N-acetyltransferase-like COP00_13855 d5c0972614275ce8a11a0adf9f576bea 180 Hamap MF_00800 UPF0340 protein . 1 180 89.94 T 13-10-2018 IPR006340 Protein of unknown function DUF436 COP00_04000 81fdf743b52effb395b96c3d995ef620 223 SUPERFAMILY SSF51206 26 140 2.36E-24 T 13-10-2018 IPR018490 Cyclic nucleotide-binding-like COP00_04000 81fdf743b52effb395b96c3d995ef620 223 SUPERFAMILY SSF46785 150 217 3.63E-5 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_04000 81fdf743b52effb395b96c3d995ef620 223 Pfam PF00027 Cyclic nucleotide-binding domain 33 119 1.1E-14 T 13-10-2018 IPR000595 Cyclic nucleotide-binding domain COP00_04000 81fdf743b52effb395b96c3d995ef620 223 Gene3D G3DSA:2.60.120.1460 25 219 2.5E-22 T 13-10-2018 COP00_04000 81fdf743b52effb395b96c3d995ef620 223 SMART SM00100 17 132 9.5E-9 T 13-10-2018 IPR000595 Cyclic nucleotide-binding domain COP00_17570 a03aee0d4c1851aab9cdbbdb6a1bb54f 303 SUPERFAMILY SSF103481 42 143 1.44E-12 T 13-10-2018 COP00_17570 a03aee0d4c1851aab9cdbbdb6a1bb54f 303 SUPERFAMILY SSF103481 191 293 5.1E-12 T 13-10-2018 COP00_17570 a03aee0d4c1851aab9cdbbdb6a1bb54f 303 Pfam PF00892 EamA-like transporter family 152 288 4.2E-19 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 COP00_17570 a03aee0d4c1851aab9cdbbdb6a1bb54f 303 Pfam PF00892 EamA-like transporter family 9 141 8.4E-24 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 COP00_12095 7c2c2c29364f141aefb51366c8460bbc 562 Pfam PF02652 L-lactate permease 16 553 5.5E-207 T 13-10-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 COP00_12095 7c2c2c29364f141aefb51366c8460bbc 562 TIGRFAM TIGR00795 lctP: transporter, lactate permease (LctP) family 6 553 1.6E-184 T 13-10-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 COP00_20830 9ce6bbf40e8bc5551e70242eb2422178 71 Pfam PF06569 Protein of unknown function (DUF1128) 1 71 8.1E-30 T 13-10-2018 IPR009507 Protein of unknown function UPF0435 COP00_20830 9ce6bbf40e8bc5551e70242eb2422178 71 Hamap MF_00829 UPF0435 protein . 4 71 19.058 T 13-10-2018 IPR009507 Protein of unknown function UPF0435 COP00_10550 034ed1859110e665642668f669e5a798 367 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 321 343 - T 13-10-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 COP00_10550 034ed1859110e665642668f669e5a798 367 Pfam PF01594 AI-2E family transporter 18 348 4.1E-89 T 13-10-2018 IPR002549 Transmembrane protein TqsA-like COP00_18635 31d7f98b07ba9b9098fb8065723b3e0a 471 Pfam PF00392 Bacterial regulatory proteins, gntR family 16 78 1.2E-16 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 COP00_18635 31d7f98b07ba9b9098fb8065723b3e0a 471 SMART SM00345 19 78 1.7E-15 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 COP00_18635 31d7f98b07ba9b9098fb8065723b3e0a 471 Pfam PF00155 Aminotransferase class I and II 117 409 1.6E-20 T 13-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 COP00_18635 31d7f98b07ba9b9098fb8065723b3e0a 471 Gene3D G3DSA:1.10.10.10 1 91 6.9E-25 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_18635 31d7f98b07ba9b9098fb8065723b3e0a 471 SUPERFAMILY SSF46785 14 82 3.4E-18 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_18635 31d7f98b07ba9b9098fb8065723b3e0a 471 Gene3D G3DSA:3.40.640.10 95 464 1.3E-125 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 COP00_18635 31d7f98b07ba9b9098fb8065723b3e0a 471 SUPERFAMILY SSF53383 91 468 5.03E-68 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase COP00_04415 73ef5ab11f87f134496abcc38abaf390 400 TIGRFAM TIGR02887 spore_ger_x_C: germination protein, Ger(x)C family 10 397 3.1E-105 T 13-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 COP00_04415 73ef5ab11f87f134496abcc38abaf390 400 Gene3D G3DSA:3.30.300.210 245 399 1.8E-42 T 13-10-2018 IPR038501 Spore germination GerAC superfamily COP00_04415 73ef5ab11f87f134496abcc38abaf390 400 Pfam PF05504 Spore germination B3/ GerAC like, C-terminal 228 395 3.7E-35 T 13-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 COP00_11520 b8fa5e36af75c4a910e3ba197106c9cf 158 SMART SM00347 39 143 4.5E-15 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 COP00_11520 b8fa5e36af75c4a910e3ba197106c9cf 158 Pfam PF01047 MarR family 46 104 5.5E-10 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 COP00_11520 b8fa5e36af75c4a910e3ba197106c9cf 158 Gene3D G3DSA:1.10.10.10 3 158 5.9E-21 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_11520 b8fa5e36af75c4a910e3ba197106c9cf 158 SUPERFAMILY SSF46785 44 157 1.44E-18 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_18045 c35758ba7f7e1c05b05600e7360cc386 419 Gene3D G3DSA:3.40.50.300 36 274 1.8E-70 T 13-10-2018 COP00_18045 c35758ba7f7e1c05b05600e7360cc386 419 ProSitePatterns PS00211 ABC transporters family signature. 170 184 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 COP00_18045 c35758ba7f7e1c05b05600e7360cc386 419 SUPERFAMILY SSF52540 44 275 1.17E-75 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_18045 c35758ba7f7e1c05b05600e7360cc386 419 Pfam PF00005 ABC transporter 50 197 9.7E-34 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 COP00_18045 c35758ba7f7e1c05b05600e7360cc386 419 Gene3D G3DSA:3.10.580.10 283 395 3.5E-15 T 13-10-2018 COP00_18045 c35758ba7f7e1c05b05600e7360cc386 419 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 41 395 6.3E-174 T 13-10-2018 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 COP00_18045 c35758ba7f7e1c05b05600e7360cc386 419 SMART SM00116 287 335 0.0011 T 13-10-2018 IPR000644 CBS domain COP00_18045 c35758ba7f7e1c05b05600e7360cc386 419 SMART SM00116 347 394 0.0015 T 13-10-2018 IPR000644 CBS domain COP00_18045 c35758ba7f7e1c05b05600e7360cc386 419 Pfam PF00571 CBS domain 343 394 0.0074 T 13-10-2018 IPR000644 CBS domain COP00_18045 c35758ba7f7e1c05b05600e7360cc386 419 SUPERFAMILY SSF54631 279 395 9.98E-17 T 13-10-2018 COP00_18045 c35758ba7f7e1c05b05600e7360cc386 419 SMART SM00382 58 247 6.1E-21 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_18755 35c855c8626ceeea951100ed507d0671 249 SMART SM00346 5 93 4.8E-24 T 13-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 COP00_18755 35c855c8626ceeea951100ed507d0671 249 SUPERFAMILY SSF46785 6 76 2.26E-14 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_18755 35c855c8626ceeea951100ed507d0671 249 SUPERFAMILY SSF55781 61 248 1.96E-45 T 13-10-2018 COP00_18755 35c855c8626ceeea951100ed507d0671 249 Pfam PF01614 Bacterial transcriptional regulator 120 245 5.8E-33 T 13-10-2018 IPR014757 Transcription regulator IclR, C-terminal COP00_18755 35c855c8626ceeea951100ed507d0671 249 Pfam PF09339 IclR helix-turn-helix domain 7 56 5.3E-11 T 13-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 COP00_18755 35c855c8626ceeea951100ed507d0671 249 Gene3D G3DSA:1.10.10.10 4 76 1.5E-17 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_18755 35c855c8626ceeea951100ed507d0671 249 Gene3D G3DSA:3.30.450.40 77 249 2.2E-51 T 13-10-2018 IPR029016 GAF-like domain superfamily COP00_19390 e7ea2aaff230213dedca4ddbd55f8105 212 Pfam PF04203 Sortase family 84 204 1.2E-23 T 13-10-2018 IPR005754 Sortase family COP00_19390 e7ea2aaff230213dedca4ddbd55f8105 212 TIGRFAM TIGR01076 sortase_fam: sortase 82 206 1.9E-16 T 13-10-2018 IPR005754 Sortase family COP00_19390 e7ea2aaff230213dedca4ddbd55f8105 212 Gene3D G3DSA:2.40.260.10 58 211 5.5E-39 T 13-10-2018 IPR023365 Sortase domain superfamily COP00_19390 e7ea2aaff230213dedca4ddbd55f8105 212 SUPERFAMILY SSF63817 41 205 1.44E-40 T 13-10-2018 IPR023365 Sortase domain superfamily COP00_00505 b36cf72fd57cfbc841f55b1f2276a50d 440 Gene3D G3DSA:3.30.450.20 66 218 5.0E-27 T 13-10-2018 COP00_00505 b36cf72fd57cfbc841f55b1f2276a50d 440 Pfam PF00989 PAS fold 81 187 7.5E-17 T 13-10-2018 IPR013767 PAS fold GO:0006355 COP00_00505 b36cf72fd57cfbc841f55b1f2276a50d 440 Gene3D G3DSA:3.30.565.10 270 424 4.8E-45 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily COP00_00505 b36cf72fd57cfbc841f55b1f2276a50d 440 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 320 425 7.4E-22 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase COP00_00505 b36cf72fd57cfbc841f55b1f2276a50d 440 SMART SM00091 78 146 1.1E-8 T 13-10-2018 IPR000014 PAS domain COP00_00505 b36cf72fd57cfbc841f55b1f2276a50d 440 SMART SM00086 149 190 2.8E-8 T 13-10-2018 IPR001610 PAC motif COP00_00505 b36cf72fd57cfbc841f55b1f2276a50d 440 SUPERFAMILY SSF55785 83 191 1.35E-21 T 13-10-2018 IPR035965 PAS domain superfamily COP00_00505 b36cf72fd57cfbc841f55b1f2276a50d 440 SUPERFAMILY SSF47384 201 273 8.44E-13 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 COP00_00505 b36cf72fd57cfbc841f55b1f2276a50d 440 PRINTS PR00344 Bacterial sensor protein C-terminal signature 410 423 1.2E-16 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 COP00_00505 b36cf72fd57cfbc841f55b1f2276a50d 440 PRINTS PR00344 Bacterial sensor protein C-terminal signature 375 385 1.2E-16 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 COP00_00505 b36cf72fd57cfbc841f55b1f2276a50d 440 PRINTS PR00344 Bacterial sensor protein C-terminal signature 357 371 1.2E-16 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 COP00_00505 b36cf72fd57cfbc841f55b1f2276a50d 440 PRINTS PR00344 Bacterial sensor protein C-terminal signature 386 404 1.2E-16 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 COP00_00505 b36cf72fd57cfbc841f55b1f2276a50d 440 SMART SM00387 320 426 1.8E-34 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase COP00_00505 b36cf72fd57cfbc841f55b1f2276a50d 440 Pfam PF00512 His Kinase A (phospho-acceptor) domain 215 272 4.7E-14 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 COP00_00505 b36cf72fd57cfbc841f55b1f2276a50d 440 SMART SM00388 213 276 3.9E-13 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 COP00_00505 b36cf72fd57cfbc841f55b1f2276a50d 440 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 81 197 4.9E-21 T 13-10-2018 IPR000014 PAS domain COP00_00505 b36cf72fd57cfbc841f55b1f2276a50d 440 Gene3D G3DSA:1.10.287.130 219 269 5.3E-15 T 13-10-2018 COP00_00505 b36cf72fd57cfbc841f55b1f2276a50d 440 SUPERFAMILY SSF55874 266 424 4.98E-39 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily COP00_21730 b0da3fdc26b5715c3cc69454454a82e3 82 Pfam PF14148 YhdB-like protein 2 69 9.2E-40 T 13-10-2018 IPR025431 YhdB-like protein COP00_23670 dda1402510436f5d8bc71ab6eccf30d8 365 TIGRFAM TIGR00695 uxuA: mannonate dehydratase 146 350 9.0E-75 T 13-10-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 COP00_23670 dda1402510436f5d8bc71ab6eccf30d8 365 SUPERFAMILY SSF51658 1 347 2.05E-91 T 13-10-2018 IPR036237 Xylose isomerase-like superfamily COP00_23670 dda1402510436f5d8bc71ab6eccf30d8 365 Pfam PF03786 D-mannonate dehydratase (UxuA) 1 350 3.5E-159 T 13-10-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 COP00_23670 dda1402510436f5d8bc71ab6eccf30d8 365 Hamap MF_00106 Mannonate dehydratase [uxuA]. 1 365 166.187 T 13-10-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 COP00_23670 dda1402510436f5d8bc71ab6eccf30d8 365 Gene3D G3DSA:3.20.20.150 1 355 1.5E-145 T 13-10-2018 COP00_23670 dda1402510436f5d8bc71ab6eccf30d8 365 PIRSF PIRSF016049 1 356 6.3E-118 T 13-10-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 COP00_19680 7f6810cf21f82d28799a25cd5573d0a3 171 Pfam PF05119 Phage terminase, small subunit 52 157 2.9E-27 T 13-10-2018 IPR006448 Putative phage terminase, small subunit, P27 family COP00_19680 7f6810cf21f82d28799a25cd5573d0a3 171 TIGRFAM TIGR01558 sm_term_P27: putative phage terminase, small subunit, P27 family 43 162 5.7E-29 T 13-10-2018 IPR006448 Putative phage terminase, small subunit, P27 family COP00_18715 ecb04ef104a36518707762b72c1903f3 130 Pfam PF07977 FabA-like domain 4 121 4.4E-15 T 13-10-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 COP00_18715 ecb04ef104a36518707762b72c1903f3 130 Gene3D G3DSA:3.10.129.10 1 128 8.3E-33 T 13-10-2018 COP00_18715 ecb04ef104a36518707762b72c1903f3 130 SUPERFAMILY SSF54637 3 126 2.15E-30 T 13-10-2018 IPR029069 HotDog domain superfamily COP00_06310 356f9caf2c439a0af7238bd4ef6a43fb 220 SUPERFAMILY SSF52540 2 199 2.48E-42 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_06310 356f9caf2c439a0af7238bd4ef6a43fb 220 SMART SM00382 26 198 1.4E-8 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_06310 356f9caf2c439a0af7238bd4ef6a43fb 220 ProSitePatterns PS00211 ABC transporters family signature. 123 137 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 COP00_06310 356f9caf2c439a0af7238bd4ef6a43fb 220 Gene3D G3DSA:3.40.50.300 1 210 4.1E-44 T 13-10-2018 COP00_06310 356f9caf2c439a0af7238bd4ef6a43fb 220 Pfam PF00005 ABC transporter 18 150 1.1E-20 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 COP00_11335 7ead2ef781fd7fb62497f6dc241e7b48 291 Gene3D G3DSA:3.30.420.40 105 290 1.2E-66 T 13-10-2018 COP00_11335 7ead2ef781fd7fb62497f6dc241e7b48 291 Pfam PF00480 ROK family 4 283 3.0E-73 T 13-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 COP00_11335 7ead2ef781fd7fb62497f6dc241e7b48 291 SUPERFAMILY SSF53067 1 284 2.38E-50 T 13-10-2018 COP00_11335 7ead2ef781fd7fb62497f6dc241e7b48 291 Gene3D G3DSA:3.30.420.40 1 104 5.0E-29 T 13-10-2018 COP00_04355 b7e99f1118224abee4b0e777e421d1b6 157 Gene3D G3DSA:1.10.10.10 8 147 1.4E-27 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_04355 b7e99f1118224abee4b0e777e421d1b6 157 SMART SM00347 29 132 2.1E-17 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 COP00_04355 b7e99f1118224abee4b0e777e421d1b6 157 SUPERFAMILY SSF46785 17 146 3.64E-26 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_04355 b7e99f1118224abee4b0e777e421d1b6 157 PRINTS PR00598 Bacterial regulatory protein MarR family signature 56 72 1.3E-11 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 COP00_04355 b7e99f1118224abee4b0e777e421d1b6 157 PRINTS PR00598 Bacterial regulatory protein MarR family signature 73 88 1.3E-11 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 COP00_04355 b7e99f1118224abee4b0e777e421d1b6 157 PRINTS PR00598 Bacterial regulatory protein MarR family signature 92 108 1.3E-11 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 COP00_04355 b7e99f1118224abee4b0e777e421d1b6 157 PRINTS PR00598 Bacterial regulatory protein MarR family signature 122 142 1.3E-11 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 COP00_04355 b7e99f1118224abee4b0e777e421d1b6 157 Pfam PF12802 MarR family 43 95 5.2E-11 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 COP00_21770 9c29c8cc09d499bd9c53386e0229b9e7 292 SUPERFAMILY SSF53850 86 288 7.96E-27 T 13-10-2018 COP00_21770 9c29c8cc09d499bd9c53386e0229b9e7 292 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 2.3E-18 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 COP00_21770 9c29c8cc09d499bd9c53386e0229b9e7 292 SUPERFAMILY SSF46785 1 87 7.27E-23 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_21770 9c29c8cc09d499bd9c53386e0229b9e7 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 7.5E-8 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 COP00_21770 9c29c8cc09d499bd9c53386e0229b9e7 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 7.5E-8 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 COP00_21770 9c29c8cc09d499bd9c53386e0229b9e7 292 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 7.5E-8 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 COP00_21770 9c29c8cc09d499bd9c53386e0229b9e7 292 Pfam PF03466 LysR substrate binding domain 90 287 2.2E-30 T 13-10-2018 IPR005119 LysR, substrate-binding COP00_21770 9c29c8cc09d499bd9c53386e0229b9e7 292 Gene3D G3DSA:3.40.190.10 164 259 1.4E-22 T 13-10-2018 COP00_21770 9c29c8cc09d499bd9c53386e0229b9e7 292 Gene3D G3DSA:3.40.190.10 93 163 1.4E-22 T 13-10-2018 COP00_21770 9c29c8cc09d499bd9c53386e0229b9e7 292 Gene3D G3DSA:1.10.10.10 1 92 9.9E-26 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_16075 aa3805e9a7f0356be01a0c0596b2428f 182 Gene3D G3DSA:3.40.50.850 1 179 4.9E-42 T 13-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 COP00_16075 aa3805e9a7f0356be01a0c0596b2428f 182 SUPERFAMILY SSF52499 3 180 1.83E-44 T 13-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 COP00_16075 aa3805e9a7f0356be01a0c0596b2428f 182 Pfam PF00857 Isochorismatase family 6 174 5.6E-31 T 13-10-2018 IPR000868 Isochorismatase-like GO:0003824 COP00_00200 af2b88bc80aba5a393f4ea3d02ec9719 570 Pfam PF00391 PEP-utilising enzyme, mobile domain 153 225 5.8E-23 T 13-10-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 COP00_00200 af2b88bc80aba5a393f4ea3d02ec9719 570 PIRSF PIRSF000732 1 570 5.0E-228 T 13-10-2018 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 COP00_00200 af2b88bc80aba5a393f4ea3d02ec9719 570 SUPERFAMILY SSF52009 125 248 3.14E-37 T 13-10-2018 IPR036637 Phosphohistidine domain superfamily GO:0016310|GO:0016772 COP00_00200 af2b88bc80aba5a393f4ea3d02ec9719 570 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 447 465 - T 13-10-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 COP00_00200 af2b88bc80aba5a393f4ea3d02ec9719 570 SUPERFAMILY SSF51621 250 544 1.44E-113 T 13-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 COP00_00200 af2b88bc80aba5a393f4ea3d02ec9719 570 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 4 566 1.6E-272 T 13-10-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 COP00_00200 af2b88bc80aba5a393f4ea3d02ec9719 570 SUPERFAMILY SSF47831 23 143 1.83E-37 T 13-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 COP00_00200 af2b88bc80aba5a393f4ea3d02ec9719 570 Gene3D G3DSA:1.10.274.10 23 146 3.9E-81 T 13-10-2018 IPR036618 PtsI, HPr-binding domain superfamily GO:0009401 COP00_00200 af2b88bc80aba5a393f4ea3d02ec9719 570 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 464 479 1.2E-32 T 13-10-2018 COP00_00200 af2b88bc80aba5a393f4ea3d02ec9719 570 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 500 512 1.2E-32 T 13-10-2018 COP00_00200 af2b88bc80aba5a393f4ea3d02ec9719 570 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 293 312 1.2E-32 T 13-10-2018 COP00_00200 af2b88bc80aba5a393f4ea3d02ec9719 570 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 447 462 1.2E-32 T 13-10-2018 COP00_00200 af2b88bc80aba5a393f4ea3d02ec9719 570 Pfam PF05524 PEP-utilising enzyme, N-terminal 5 126 1.0E-34 T 13-10-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 COP00_00200 af2b88bc80aba5a393f4ea3d02ec9719 570 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 250 540 5.5E-131 T 13-10-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 COP00_00200 af2b88bc80aba5a393f4ea3d02ec9719 570 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 184 195 - T 13-10-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 COP00_00200 af2b88bc80aba5a393f4ea3d02ec9719 570 Gene3D G3DSA:3.20.20.60 235 569 1.0E-128 T 13-10-2018 COP00_00200 af2b88bc80aba5a393f4ea3d02ec9719 570 Gene3D G3DSA:3.50.30.10 6 234 3.9E-81 T 13-10-2018 COP00_13975 e3fe6d4852850ff3cf473bf7fa8e6776 285 Gene3D G3DSA:3.20.20.70 1 285 2.6E-116 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 COP00_13975 e3fe6d4852850ff3cf473bf7fa8e6776 285 PIRSF PIRSF001359 1 285 3.4E-129 T 13-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 COP00_13975 e3fe6d4852850ff3cf473bf7fa8e6776 285 TIGRFAM TIGR01859 fruc_bis_ald_: fructose-1,6-bisphosphate aldolase, class II 3 285 1.4E-135 T 13-10-2018 IPR011289 Fructose-1,6-bisphosphate aldolase, class 2 GO:0004332|GO:0006096|GO:0008270|GO:0030388 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385 COP00_13975 e3fe6d4852850ff3cf473bf7fa8e6776 285 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 285 8.4E-120 T 13-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 COP00_13975 e3fe6d4852850ff3cf473bf7fa8e6776 285 SUPERFAMILY SSF51569 1 285 4.83E-107 T 13-10-2018 COP00_13975 e3fe6d4852850ff3cf473bf7fa8e6776 285 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 74 87 - T 13-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 COP00_13975 e3fe6d4852850ff3cf473bf7fa8e6776 285 Pfam PF01116 Fructose-bisphosphate aldolase class-II 4 284 4.9E-106 T 13-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 COP00_13975 e3fe6d4852850ff3cf473bf7fa8e6776 285 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 134 145 - T 13-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 COP00_08625 3b4fb3be8fc31b5b741de761bc0dbbd1 574 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 208 342 2.6E-45 T 13-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 COP00_08625 3b4fb3be8fc31b5b741de761bc0dbbd1 574 SUPERFAMILY SSF52467 199 368 3.67E-62 T 13-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily COP00_08625 3b4fb3be8fc31b5b741de761bc0dbbd1 574 Gene3D G3DSA:3.40.50.1220 202 366 1.3E-59 T 13-10-2018 COP00_08625 3b4fb3be8fc31b5b741de761bc0dbbd1 574 Gene3D G3DSA:3.40.50.970 10 189 7.4E-70 T 13-10-2018 COP00_08625 3b4fb3be8fc31b5b741de761bc0dbbd1 574 Gene3D G3DSA:3.40.50.970 369 573 1.1E-69 T 13-10-2018 COP00_08625 3b4fb3be8fc31b5b741de761bc0dbbd1 574 SUPERFAMILY SSF52518 15 188 2.09E-60 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold COP00_08625 3b4fb3be8fc31b5b741de761bc0dbbd1 574 SUPERFAMILY SSF52518 377 572 2.86E-67 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold COP00_08625 3b4fb3be8fc31b5b741de761bc0dbbd1 574 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 18 179 3.1E-54 T 13-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 COP00_08625 3b4fb3be8fc31b5b741de761bc0dbbd1 574 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 18 572 6.4E-274 T 13-10-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 COP00_08625 3b4fb3be8fc31b5b741de761bc0dbbd1 574 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 400 548 6.2E-53 T 13-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 COP00_01265 e98775768da3ff23b6623f04892c9fab 243 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 243 116.034 T 13-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 COP00_01265 e98775768da3ff23b6623f04892c9fab 243 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 23 221 2.7E-77 T 13-10-2018 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 COP00_01265 e98775768da3ff23b6623f04892c9fab 243 Gene3D G3DSA:1.10.1270.20 165 243 6.2E-35 T 13-10-2018 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 COP00_01265 e98775768da3ff23b6623f04892c9fab 243 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 1 234 3.1E-107 T 13-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 COP00_01265 e98775768da3ff23b6623f04892c9fab 243 Gene3D G3DSA:3.40.1280.10 1 164 7.1E-70 T 13-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal COP00_01265 e98775768da3ff23b6623f04892c9fab 243 PIRSF PIRSF000386 1 242 1.0E-105 T 13-10-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 COP00_01265 e98775768da3ff23b6623f04892c9fab 243 SUPERFAMILY SSF75217 1 241 2.29E-104 T 13-10-2018 IPR029028 Alpha/beta knot methyltransferases COP00_07200 a4fd57b21851d7e246aa28f741118668 679 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 1 676 1.3E-273 T 13-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 COP00_07200 a4fd57b21851d7e246aa28f741118668 679 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 394 413 8.9E-38 T 13-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 COP00_07200 a4fd57b21851d7e246aa28f741118668 679 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 243 258 8.9E-38 T 13-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 COP00_07200 a4fd57b21851d7e246aa28f741118668 679 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 7 20 8.9E-38 T 13-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 COP00_07200 a4fd57b21851d7e246aa28f741118668 679 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 50 62 8.9E-38 T 13-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 COP00_07200 a4fd57b21851d7e246aa28f741118668 679 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 315 331 8.9E-38 T 13-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 COP00_07200 a4fd57b21851d7e246aa28f741118668 679 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 3 676 27.435 T 13-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 COP00_07200 a4fd57b21851d7e246aa28f741118668 679 SUPERFAMILY SSF109604 337 526 2.67E-21 T 13-10-2018 COP00_07200 a4fd57b21851d7e246aa28f741118668 679 Pfam PF05746 DALR anticodon binding domain 572 669 4.5E-6 T 13-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 COP00_07200 a4fd57b21851d7e246aa28f741118668 679 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 6 541 3.9E-213 T 13-10-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 COP00_00315 0d162ce03fd16b507bdd7f8df6788cfa 59 Pfam PF14156 Antirepressor AbbA 2 58 9.6E-31 T 13-10-2018 IPR025446 Antirepressor AbbA COP00_00315 0d162ce03fd16b507bdd7f8df6788cfa 59 ProDom PD054279 YKZF 2 59 6.0E-25 T 13-10-2018 COP00_05400 d8a26355d06ff2a3e5c5a42033fb717d 98 Hamap MF_02011 Cell cycle protein GpsB [gpsB]. 3 94 23.881 T 13-10-2018 IPR011229 Cell cycle protein GpsB COP00_05400 d8a26355d06ff2a3e5c5a42033fb717d 98 TIGRFAM TIGR03544 DivI1A_domain: DivIVA domain 8 41 2.1E-14 T 13-10-2018 IPR019933 DivIVA domain COP00_05400 d8a26355d06ff2a3e5c5a42033fb717d 98 Pfam PF05103 DivIVA protein 8 69 4.3E-16 T 13-10-2018 IPR007793 DivIVA family COP00_05400 d8a26355d06ff2a3e5c5a42033fb717d 98 PIRSF PIRSF029938 1 98 9.7E-38 T 13-10-2018 IPR011229 Cell cycle protein GpsB COP00_16190 ad0b438ebb66464cddd020c97da4a2ef 247 Gene3D G3DSA:3.40.50.150 8 247 1.1E-70 T 13-10-2018 COP00_16190 ad0b438ebb66464cddd020c97da4a2ef 247 SUPERFAMILY SSF53335 15 199 5.97E-31 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase COP00_16190 ad0b438ebb66464cddd020c97da4a2ef 247 Pfam PF05175 Methyltransferase small domain 19 171 1.2E-10 T 13-10-2018 IPR007848 Methyltransferase small domain GO:0008168 COP00_13835 2ec8829213fe2b6a61add5ce0cb4fb3b 127 ProDom PD020811 ATP SYNTHASE I ION HYDROLASE SUBUNIT I CF0 MEMBRANE HYDROGEN 23 127 3.0E-47 T 13-10-2018 COP00_13835 2ec8829213fe2b6a61add5ce0cb4fb3b 127 Pfam PF03899 ATP synthase I chain 10 105 2.8E-19 T 13-10-2018 IPR005598 ATP synthase protein I COP00_08080 6890b1b1b4120e860b320c34ca3a92ae 584 Pfam PF03717 Penicillin-binding Protein dimerisation domain 61 219 1.2E-8 T 13-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 COP00_08080 6890b1b1b4120e860b320c34ca3a92ae 584 SUPERFAMILY SSF56601 188 578 1.86E-60 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like COP00_08080 6890b1b1b4120e860b320c34ca3a92ae 584 SUPERFAMILY SSF56519 50 226 1.7E-21 T 13-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 COP00_08080 6890b1b1b4120e860b320c34ca3a92ae 584 Gene3D G3DSA:3.40.710.10 237 584 1.6E-68 T 13-10-2018 COP00_08080 6890b1b1b4120e860b320c34ca3a92ae 584 Pfam PF00905 Penicillin binding protein transpeptidase domain 263 573 7.4E-56 T 13-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 COP00_08080 6890b1b1b4120e860b320c34ca3a92ae 584 Gene3D G3DSA:3.90.1310.30 50 232 2.4E-16 T 13-10-2018 COP00_00450 72513656b834c9a98b6b325f9779c2e2 251 SMART SM00420 6 58 4.1E-21 T 13-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 COP00_00450 72513656b834c9a98b6b325f9779c2e2 251 Pfam PF08220 DeoR-like helix-turn-helix domain 6 59 3.9E-16 T 13-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 COP00_00450 72513656b834c9a98b6b325f9779c2e2 251 Pfam PF00455 DeoR C terminal sensor domain 75 228 2.8E-50 T 13-10-2018 IPR014036 DeoR C-terminal sensor domain COP00_00450 72513656b834c9a98b6b325f9779c2e2 251 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 1.6E-6 T 13-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 COP00_00450 72513656b834c9a98b6b325f9779c2e2 251 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 1.6E-6 T 13-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 COP00_00450 72513656b834c9a98b6b325f9779c2e2 251 SUPERFAMILY SSF100950 74 229 4.81E-33 T 13-10-2018 IPR037171 NagB/RpiA transferase-like COP00_00450 72513656b834c9a98b6b325f9779c2e2 251 SUPERFAMILY SSF46785 5 77 4.68E-16 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_00450 72513656b834c9a98b6b325f9779c2e2 251 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 13-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 COP00_00450 72513656b834c9a98b6b325f9779c2e2 251 SMART SM01134 73 232 1.4E-66 T 13-10-2018 COP00_08185 bb623b143b2aa6a0b7b252f8c6e79ac9 372 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 8 360 40.978 T 13-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 COP00_08185 bb623b143b2aa6a0b7b252f8c6e79ac9 372 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 9 359 9.4E-140 T 13-10-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 COP00_08185 bb623b143b2aa6a0b7b252f8c6e79ac9 372 SUPERFAMILY SSF52402 7 244 1.41E-59 T 13-10-2018 COP00_08185 bb623b143b2aa6a0b7b252f8c6e79ac9 372 Gene3D G3DSA:3.40.50.620 1 213 1.2E-98 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold COP00_08185 bb623b143b2aa6a0b7b252f8c6e79ac9 372 Gene3D G3DSA:2.40.30.10 279 372 3.3E-27 T 13-10-2018 COP00_08185 bb623b143b2aa6a0b7b252f8c6e79ac9 372 Pfam PF03054 tRNA methyl transferase 9 359 4.3E-150 T 13-10-2018 COP00_08185 bb623b143b2aa6a0b7b252f8c6e79ac9 372 Gene3D G3DSA:2.30.30.280 214 277 3.5E-25 T 13-10-2018 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 MetaCyc: PWY-7887|MetaCyc: PWY-7892|Reactome: R-HSA-6787450 COP00_08470 f57a8057e98d18864c1ea3ed7d3d6297 297 PIRSF PIRSF038471 1 294 4.0E-62 T 13-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 COP00_08470 f57a8057e98d18864c1ea3ed7d3d6297 297 Pfam PF04085 rod shape-determining protein MreC 123 283 3.1E-43 T 13-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 COP00_08470 f57a8057e98d18864c1ea3ed7d3d6297 297 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 7 294 1.4E-92 T 13-10-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 COP00_08470 f57a8057e98d18864c1ea3ed7d3d6297 297 Gene3D G3DSA:2.40.10.340 120 280 9.1E-48 T 13-10-2018 COP00_08470 f57a8057e98d18864c1ea3ed7d3d6297 297 Gene3D G3DSA:2.40.10.350 179 273 9.1E-48 T 13-10-2018 COP00_22775 13e226a9e22568ad784b0a7a03e4e3bb 319 Gene3D G3DSA:3.40.50.2300 132 298 2.2E-77 T 13-10-2018 COP00_22775 13e226a9e22568ad784b0a7a03e4e3bb 319 Pfam PF02608 ABC transporter substrate-binding protein PnrA-like 27 315 1.1E-72 T 13-10-2018 IPR003760 ABC transporter substrate-binding protein PnrA-like GO:0005886 COP00_22775 13e226a9e22568ad784b0a7a03e4e3bb 319 Gene3D G3DSA:3.40.50.2300 40 282 2.2E-77 T 13-10-2018 COP00_22775 13e226a9e22568ad784b0a7a03e4e3bb 319 SUPERFAMILY SSF53822 25 229 1.68E-27 T 13-10-2018 IPR028082 Periplasmic binding protein-like I COP00_13805 b6c695c536071573c18bd31be7d40793 284 Gene3D G3DSA:1.10.287.80 6 279 1.3E-99 T 13-10-2018 COP00_13805 b6c695c536071573c18bd31be7d40793 284 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 2 283 6.0E-108 T 13-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 COP00_13805 b6c695c536071573c18bd31be7d40793 284 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 283 35.507 T 13-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 COP00_13805 b6c695c536071573c18bd31be7d40793 284 Gene3D G3DSA:3.40.1380.10 61 202 1.3E-99 T 13-10-2018 COP00_13805 b6c695c536071573c18bd31be7d40793 284 PRINTS PR00126 ATP synthase gamma subunit signature 261 282 1.9E-40 T 13-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 COP00_13805 b6c695c536071573c18bd31be7d40793 284 PRINTS PR00126 ATP synthase gamma subunit signature 230 249 1.9E-40 T 13-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 COP00_13805 b6c695c536071573c18bd31be7d40793 284 PRINTS PR00126 ATP synthase gamma subunit signature 72 91 1.9E-40 T 13-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 COP00_13805 b6c695c536071573c18bd31be7d40793 284 PRINTS PR00126 ATP synthase gamma subunit signature 165 182 1.9E-40 T 13-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 COP00_13805 b6c695c536071573c18bd31be7d40793 284 Pfam PF00231 ATP synthase 3 283 2.7E-97 T 13-10-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 COP00_13805 b6c695c536071573c18bd31be7d40793 284 SUPERFAMILY SSF52943 2 283 5.89E-90 T 13-10-2018 IPR035968 ATP synthase, F1 complex, gamma subunit superfamily GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 COP00_13805 b6c695c536071573c18bd31be7d40793 284 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 269 282 - T 13-10-2018 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 COP00_14575 269a870a750f2bff5e5f119a15cd44b1 109 SUPERFAMILY SSF46973 1 100 2.22E-38 T 13-10-2018 IPR036542 Phosphotransferase system, lactose/cellobiose-type IIA subunit superfamily GO:0009401 COP00_14575 269a870a750f2bff5e5f119a15cd44b1 109 Gene3D G3DSA:1.20.58.280 1 106 1.4E-41 T 13-10-2018 COP00_14575 269a870a750f2bff5e5f119a15cd44b1 109 PIRSF PIRSF000699 1 105 2.8E-40 T 13-10-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 COP00_14575 269a870a750f2bff5e5f119a15cd44b1 109 Pfam PF02255 PTS system, Lactose/Cellobiose specific IIA subunit 7 100 4.3E-38 T 13-10-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 COP00_07100 cb953c4e7a33839fdce6c22c71565008 293 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 19 225 4.8E-65 T 13-10-2018 IPR003740 Uncharacterised membrane protein YitT COP00_07100 cb953c4e7a33839fdce6c22c71565008 293 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 231 285 5.4E-22 T 13-10-2018 IPR019264 Domain of unknown function DUF2179 COP00_07100 cb953c4e7a33839fdce6c22c71565008 293 Gene3D G3DSA:3.30.70.120 203 278 1.8E-25 T 13-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal COP00_07100 cb953c4e7a33839fdce6c22c71565008 293 PIRSF PIRSF006483 1 292 1.8E-90 T 13-10-2018 IPR003740 Uncharacterised membrane protein YitT COP00_21570 dd0ad09a891799aa8a16c28e37e7a4c6 598 SUPERFAMILY SSF53474 338 588 9.92E-65 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold COP00_21570 dd0ad09a891799aa8a16c28e37e7a4c6 598 Pfam PF00326 Prolyl oligopeptidase family 383 588 2.5E-44 T 13-10-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 COP00_21570 dd0ad09a891799aa8a16c28e37e7a4c6 598 Gene3D G3DSA:3.40.50.1820 329 592 1.2E-67 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold COP00_21570 dd0ad09a891799aa8a16c28e37e7a4c6 598 SUPERFAMILY SSF69304 14 281 2.62E-19 T 13-10-2018 COP00_21570 dd0ad09a891799aa8a16c28e37e7a4c6 598 Gene3D G3DSA:2.120.10.30 3 202 8.4E-14 T 13-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like COP00_02025 8401ae5d4cd931c95caa7b188ab0a240 394 Gene3D G3DSA:3.40.50.2000 7 385 8.9E-132 T 13-10-2018 COP00_02025 8401ae5d4cd931c95caa7b188ab0a240 394 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 254 372 6.0E-13 T 13-10-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-5633231 COP00_02025 8401ae5d4cd931c95caa7b188ab0a240 394 TIGRFAM TIGR01426 MGT: glycosyltransferase, MGT family 9 388 4.2E-135 T 13-10-2018 IPR006326 UDP-glycosyltransferase, MGT GO:0016758|GO:0016999 COP00_02025 8401ae5d4cd931c95caa7b188ab0a240 394 SUPERFAMILY SSF53756 5 387 5.97E-81 T 13-10-2018 COP00_02025 8401ae5d4cd931c95caa7b188ab0a240 394 Gene3D G3DSA:3.40.50.2000 209 373 8.9E-132 T 13-10-2018 COP00_13800 0b276adab4afa8d493d0dfe5dfba8b82 473 Gene3D G3DSA:1.10.1140.10 354 472 3.2E-57 T 13-10-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 COP00_13800 0b276adab4afa8d493d0dfe5dfba8b82 473 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 138 351 1.8E-66 T 13-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 COP00_13800 0b276adab4afa8d493d0dfe5dfba8b82 473 Gene3D G3DSA:3.40.50.300 84 352 2.8E-113 T 13-10-2018 COP00_13800 0b276adab4afa8d493d0dfe5dfba8b82 473 SUPERFAMILY SSF50615 2 82 2.12E-26 T 13-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 COP00_13800 0b276adab4afa8d493d0dfe5dfba8b82 473 SUPERFAMILY SSF52540 84 356 2.28E-87 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_13800 0b276adab4afa8d493d0dfe5dfba8b82 473 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 469 57.753 T 13-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 COP00_13800 0b276adab4afa8d493d0dfe5dfba8b82 473 Gene3D G3DSA:2.40.10.170 1 82 1.1E-31 T 13-10-2018 COP00_13800 0b276adab4afa8d493d0dfe5dfba8b82 473 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 342 351 - T 13-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 COP00_13800 0b276adab4afa8d493d0dfe5dfba8b82 473 SUPERFAMILY SSF47917 354 469 1.07E-52 T 13-10-2018 COP00_13800 0b276adab4afa8d493d0dfe5dfba8b82 473 SMART SM00382 150 335 1.0E-6 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_13800 0b276adab4afa8d493d0dfe5dfba8b82 473 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 3 469 3.7E-259 T 13-10-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 COP00_13800 0b276adab4afa8d493d0dfe5dfba8b82 473 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 80 2.8E-22 T 13-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 COP00_14935 fc05ff800075a53b307fe67139efc9c1 225 Gene3D G3DSA:2.60.120.1460 19 225 5.3E-48 T 13-10-2018 COP00_14935 fc05ff800075a53b307fe67139efc9c1 225 SMART SM00419 172 220 6.8E-9 T 13-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 COP00_14935 fc05ff800075a53b307fe67139efc9c1 225 SMART SM00100 15 133 3.9E-10 T 13-10-2018 IPR000595 Cyclic nucleotide-binding domain COP00_14935 fc05ff800075a53b307fe67139efc9c1 225 SUPERFAMILY SSF51206 20 148 1.44E-33 T 13-10-2018 IPR018490 Cyclic nucleotide-binding-like COP00_14935 fc05ff800075a53b307fe67139efc9c1 225 Pfam PF00027 Cyclic nucleotide-binding domain 34 120 2.1E-15 T 13-10-2018 IPR000595 Cyclic nucleotide-binding domain COP00_14935 fc05ff800075a53b307fe67139efc9c1 225 SUPERFAMILY SSF46785 151 224 9.33E-16 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_14935 fc05ff800075a53b307fe67139efc9c1 225 Pfam PF13545 Crp-like helix-turn-helix domain 154 223 9.7E-12 T 13-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 COP00_14935 fc05ff800075a53b307fe67139efc9c1 225 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 178 194 9.1E-5 T 13-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 COP00_14935 fc05ff800075a53b307fe67139efc9c1 225 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 194 209 9.1E-5 T 13-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 COP00_20215 04aaeaef8ff43a3738e48bdcf0a5d548 742 Gene3D G3DSA:3.30.1330.10 49 197 5.7E-137 T 13-10-2018 IPR036921 PurM-like, N-terminal domain superfamily COP00_20215 04aaeaef8ff43a3738e48bdcf0a5d548 742 Gene3D G3DSA:3.90.650.10 34 362 5.7E-137 T 13-10-2018 IPR036676 PurM-like, C-terminal domain superfamily COP00_20215 04aaeaef8ff43a3738e48bdcf0a5d548 742 SUPERFAMILY SSF55326 18 201 2.54E-52 T 13-10-2018 IPR036921 PurM-like, N-terminal domain superfamily COP00_20215 04aaeaef8ff43a3738e48bdcf0a5d548 742 SUPERFAMILY SSF55326 402 570 2.62E-58 T 13-10-2018 IPR036921 PurM-like, N-terminal domain superfamily COP00_20215 04aaeaef8ff43a3738e48bdcf0a5d548 742 PIRSF PIRSF001587 8 741 0.0 T 13-10-2018 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 COP00_20215 04aaeaef8ff43a3738e48bdcf0a5d548 742 SUPERFAMILY SSF56042 572 738 1.64E-36 T 13-10-2018 IPR036676 PurM-like, C-terminal domain superfamily COP00_20215 04aaeaef8ff43a3738e48bdcf0a5d548 742 Hamap MF_00420 Phosphoribosylformylglycinamidine synthase subunit PurL [purL]. 1 742 330.565 T 13-10-2018 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 COP00_20215 04aaeaef8ff43a3738e48bdcf0a5d548 742 TIGRFAM TIGR01736 FGAM_synth_II: phosphoribosylformylglycinamidine synthase II 24 737 0.0 T 13-10-2018 IPR010074 Phosphoribosylformylglycinamidine subunit PurL GO:0004642|GO:0005737|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 COP00_20215 04aaeaef8ff43a3738e48bdcf0a5d548 742 Gene3D G3DSA:3.90.650.10 569 740 1.7E-39 T 13-10-2018 IPR036676 PurM-like, C-terminal domain superfamily COP00_20215 04aaeaef8ff43a3738e48bdcf0a5d548 742 Pfam PF02769 AIR synthase related protein, C-terminal domain 576 710 2.0E-14 T 13-10-2018 IPR010918 PurM-like, C-terminal domain COP00_20215 04aaeaef8ff43a3738e48bdcf0a5d548 742 Pfam PF02769 AIR synthase related protein, C-terminal domain 207 359 1.0E-32 T 13-10-2018 IPR010918 PurM-like, C-terminal domain COP00_20215 04aaeaef8ff43a3738e48bdcf0a5d548 742 Gene3D G3DSA:3.30.1330.10 392 566 2.2E-63 T 13-10-2018 IPR036921 PurM-like, N-terminal domain superfamily COP00_20215 04aaeaef8ff43a3738e48bdcf0a5d548 742 SUPERFAMILY SSF56042 204 430 3.89E-57 T 13-10-2018 IPR036676 PurM-like, C-terminal domain superfamily COP00_20215 04aaeaef8ff43a3738e48bdcf0a5d548 742 Pfam PF00586 AIR synthase related protein, N-terminal domain 89 194 1.7E-25 T 13-10-2018 IPR016188 PurM-like, N-terminal domain COP00_20215 04aaeaef8ff43a3738e48bdcf0a5d548 742 Pfam PF00586 AIR synthase related protein, N-terminal domain 445 562 2.8E-25 T 13-10-2018 IPR016188 PurM-like, N-terminal domain COP00_16040 cdafbdaa21c81a1952c83c672996f3ea 140 SUPERFAMILY SSF160631 6 137 2.35E-18 T 13-10-2018 COP00_16040 cdafbdaa21c81a1952c83c672996f3ea 140 Pfam PF14568 SMI1-KNR4 cell-wall 19 130 1.4E-16 T 13-10-2018 COP00_16040 cdafbdaa21c81a1952c83c672996f3ea 140 SMART SM00860 14 132 3.4E-4 T 13-10-2018 IPR018958 Knr4/Smi1-like domain COP00_16040 cdafbdaa21c81a1952c83c672996f3ea 140 Gene3D G3DSA:3.40.1580.10 5 138 9.0E-20 T 13-10-2018 IPR037883 Knr4/Smi1-like domain superfamily COP00_07275 05266734afd3a63b9ab42628bb848933 148 SUPERFAMILY SSF89095 1 147 1.94E-42 T 13-10-2018 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-like GO:0016884 COP00_07275 05266734afd3a63b9ab42628bb848933 148 Gene3D G3DSA:1.10.10.410 92 148 2.4E-25 T 13-10-2018 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal COP00_07275 05266734afd3a63b9ab42628bb848933 148 Pfam PF09424 Yqey-like protein 5 147 1.5E-52 T 13-10-2018 IPR019004 Uncharacterised protein YqeY/AIM41 COP00_07275 05266734afd3a63b9ab42628bb848933 148 Gene3D G3DSA:1.10.1510.10 1 91 6.7E-30 T 13-10-2018 COP00_11645 b0859d4b89bd467b607077119761154a 1489 Pfam PF01464 Transglycosylase SLT domain 1248 1342 9.9E-16 T 13-10-2018 IPR008258 Transglycosylase SLT domain 1 COP00_11645 b0859d4b89bd467b607077119761154a 1489 TIGRFAM TIGR01760 tape_meas_TP901: phage tail tape measure protein, TP901 family, core region 167 506 6.0E-87 T 13-10-2018 IPR010090 Phage tail tape measure protein COP00_11645 b0859d4b89bd467b607077119761154a 1489 SUPERFAMILY SSF53955 1231 1380 5.63E-17 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily COP00_11645 b0859d4b89bd467b607077119761154a 1489 Pfam PF10145 Phage-related minor tail protein 207 405 2.0E-51 T 13-10-2018 IPR010090 Phage tail tape measure protein COP00_11645 b0859d4b89bd467b607077119761154a 1489 Gene3D G3DSA:1.10.530.10 1229 1376 7.1E-10 T 13-10-2018 COP00_11630 cdd488bc462afd9db6b052b79363bd80 854 Gene3D G3DSA:2.40.300.10 687 849 7.7E-65 T 13-10-2018 COP00_11630 cdd488bc462afd9db6b052b79363bd80 854 SUPERFAMILY SSF51126 118 407 1.02E-32 T 13-10-2018 IPR011050 Pectin lyase fold/virulence factor COP00_11630 cdd488bc462afd9db6b052b79363bd80 854 SMART SM00710 458 480 270.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat COP00_11630 cdd488bc462afd9db6b052b79363bd80 854 SMART SM00710 299 331 1500.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat COP00_11630 cdd488bc462afd9db6b052b79363bd80 854 SMART SM00710 487 509 100.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat COP00_11630 cdd488bc462afd9db6b052b79363bd80 854 SMART SM00710 276 298 97.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat COP00_11630 cdd488bc462afd9db6b052b79363bd80 854 SMART SM00710 188 209 7800.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat COP00_11630 cdd488bc462afd9db6b052b79363bd80 854 SMART SM00710 333 354 3400.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat COP00_11630 cdd488bc462afd9db6b052b79363bd80 854 SMART SM00710 238 260 1700.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat COP00_11630 cdd488bc462afd9db6b052b79363bd80 854 Pfam PF11962 Peptidase_G2, IMC autoproteolytic cleavage domain 632 850 3.0E-77 T 13-10-2018 IPR021865 Peptidase G2, IMC autoproteolytic cleavage domain COP00_11630 cdd488bc462afd9db6b052b79363bd80 854 Gene3D G3DSA:2.160.20.10 107 566 7.0E-125 T 13-10-2018 IPR012334 Pectin lyase fold COP00_11630 cdd488bc462afd9db6b052b79363bd80 854 Pfam PF12708 Pectate lyase superfamily protein 120 342 1.1E-17 T 13-10-2018 IPR024535 Pectate lyase superfamily protein COP00_11630 cdd488bc462afd9db6b052b79363bd80 854 Gene3D G3DSA:4.10.80.40 740 778 7.7E-65 T 13-10-2018 COP00_11630 cdd488bc462afd9db6b052b79363bd80 854 SUPERFAMILY SSF51126 416 557 7.86E-5 T 13-10-2018 IPR011050 Pectin lyase fold/virulence factor COP00_17700 1852dc75680847938f92342a07f2812b 488 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 282 293 - T 13-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 COP00_17700 1852dc75680847938f92342a07f2812b 488 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 254 261 - T 13-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 COP00_17700 1852dc75680847938f92342a07f2812b 488 Gene3D G3DSA:3.40.309.10 259 453 3.1E-167 T 13-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 COP00_17700 1852dc75680847938f92342a07f2812b 488 Gene3D G3DSA:3.40.605.10 14 482 3.1E-167 T 13-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 COP00_17700 1852dc75680847938f92342a07f2812b 488 SUPERFAMILY SSF53720 6 487 2.88E-161 T 13-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 COP00_17700 1852dc75680847938f92342a07f2812b 488 Pfam PF00171 Aldehyde dehydrogenase family 18 484 2.7E-173 T 13-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 COP00_09715 7b38d105905223d11be1e8cdaef98eaf 172 SUPERFAMILY SSF51161 2 169 8.18E-48 T 13-10-2018 IPR011004 Trimeric LpxA-like superfamily COP00_09715 7b38d105905223d11be1e8cdaef98eaf 172 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 87 120 8.5E-7 T 13-10-2018 IPR001451 Hexapeptide repeat COP00_09715 7b38d105905223d11be1e8cdaef98eaf 172 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 12 44 4.1E-5 T 13-10-2018 IPR001451 Hexapeptide repeat COP00_09715 7b38d105905223d11be1e8cdaef98eaf 172 Gene3D G3DSA:2.160.10.10 1 172 1.3E-71 T 13-10-2018 COP00_07920 2ae275c3b3b16277a2124f290b1683de 260 ProSitePatterns PS01284 Thermonuclease family signature 2. 116 126 - T 13-10-2018 IPR002071 Thermonuclease active site GO:0003676|GO:0004518 Reactome: R-HSA-6802952 COP00_07920 2ae275c3b3b16277a2124f290b1683de 260 Pfam PF05901 Excalibur calcium-binding domain 224 259 1.6E-12 T 13-10-2018 IPR008613 Excalibur calcium-binding domain COP00_07920 2ae275c3b3b16277a2124f290b1683de 260 SMART SM00894 223 259 1.9E-13 T 13-10-2018 IPR008613 Excalibur calcium-binding domain COP00_07920 2ae275c3b3b16277a2124f290b1683de 260 SUPERFAMILY SSF50199 43 178 7.45E-36 T 13-10-2018 COP00_07920 2ae275c3b3b16277a2124f290b1683de 260 SMART SM00318 42 175 7.1E-42 T 13-10-2018 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold Reactome: R-HSA-6802952 COP00_07920 2ae275c3b3b16277a2124f290b1683de 260 Pfam PF00565 Staphylococcal nuclease homologue 67 175 9.7E-33 T 13-10-2018 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold Reactome: R-HSA-6802952 COP00_07920 2ae275c3b3b16277a2124f290b1683de 260 Gene3D G3DSA:2.40.50.90 36 180 3.5E-51 T 13-10-2018 IPR035437 SNase-like, OB-fold superfamily COP00_05875 965f93b17384d6d2637bba7f0b583d84 301 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 76 217 5.2E-48 T 13-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain COP00_05875 965f93b17384d6d2637bba7f0b583d84 301 TIGRFAM TIGR00350 lytR_cpsA_psr: cell envelope-related function transcriptional attenuator common domain 75 218 1.1E-48 T 13-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain COP00_05875 965f93b17384d6d2637bba7f0b583d84 301 Gene3D G3DSA:1.10.260.150 42 301 4.8E-92 T 13-10-2018 COP00_01785 d863583353dff985ac89053427eda9d6 627 SMART SM00853 441 583 2.5E-55 T 13-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 COP00_01785 d863583353dff985ac89053427eda9d6 627 SMART SM01340 208 326 1.7E-51 T 13-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 COP00_01785 d863583353dff985ac89053427eda9d6 627 Gene3D G3DSA:3.30.230.10 213 325 7.7E-31 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup COP00_01785 d863583353dff985ac89053427eda9d6 627 SUPERFAMILY SSF54211 190 326 3.41E-36 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold COP00_01785 d863583353dff985ac89053427eda9d6 627 Gene3D G3DSA:2.30.42.20 442 625 4.0E-67 T 13-10-2018 COP00_01785 d863583353dff985ac89053427eda9d6 627 Gene3D G3DSA:3.30.1370.100 483 576 4.0E-67 T 13-10-2018 COP00_01785 d863583353dff985ac89053427eda9d6 627 Pfam PF08676 MutL C terminal dimerisation domain 442 583 1.7E-47 T 13-10-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 COP00_01785 d863583353dff985ac89053427eda9d6 627 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 94 100 - T 13-10-2018 IPR014762 DNA mismatch repair, conserved site COP00_01785 d863583353dff985ac89053427eda9d6 627 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 209 325 1.8E-35 T 13-10-2018 IPR013507 DNA mismatch repair protein, S5 domain 2-like GO:0005524|GO:0006298|GO:0030983 COP00_01785 d863583353dff985ac89053427eda9d6 627 Gene3D G3DSA:3.30.565.10 1 212 1.0E-64 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily COP00_01785 d863583353dff985ac89053427eda9d6 627 SUPERFAMILY SSF55874 3 213 8.25E-51 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily COP00_01785 d863583353dff985ac89053427eda9d6 627 SUPERFAMILY SSF118116 437 625 1.15E-55 T 13-10-2018 IPR037198 MutL, C-terminal domain superfamily COP00_01785 d863583353dff985ac89053427eda9d6 627 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 3 306 3.5E-101 T 13-10-2018 IPR002099 DNA mismatch repair protein family, N-terminal GO:0005524|GO:0006298|GO:0030983 COP00_01785 d863583353dff985ac89053427eda9d6 627 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 2 623 27.878 T 13-10-2018 IPR020667 DNA mismatch repair protein, MutL GO:0006298 COP00_01785 d863583353dff985ac89053427eda9d6 627 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 25 138 1.6E-11 T 13-10-2018 COP00_22380 743eec52429f2e1c04bea7b7e186094d 347 Pfam PF13377 Periplasmic binding protein-like domain 173 340 9.1E-37 T 13-10-2018 COP00_22380 743eec52429f2e1c04bea7b7e186094d 347 Gene3D G3DSA:3.40.50.2300 165 301 8.8E-53 T 13-10-2018 COP00_22380 743eec52429f2e1c04bea7b7e186094d 347 Gene3D G3DSA:3.40.50.2300 80 331 8.8E-53 T 13-10-2018 COP00_22380 743eec52429f2e1c04bea7b7e186094d 347 SUPERFAMILY SSF47413 3 54 5.72E-12 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 COP00_22380 743eec52429f2e1c04bea7b7e186094d 347 Gene3D G3DSA:1.10.260.40 1 47 2.3E-17 T 13-10-2018 COP00_22380 743eec52429f2e1c04bea7b7e186094d 347 SMART SM00354 1 77 6.0E-14 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 COP00_22380 743eec52429f2e1c04bea7b7e186094d 347 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 5.2E-5 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 COP00_22380 743eec52429f2e1c04bea7b7e186094d 347 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 5.2E-5 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 COP00_22380 743eec52429f2e1c04bea7b7e186094d 347 SUPERFAMILY SSF53822 65 334 4.32E-51 T 13-10-2018 IPR028082 Periplasmic binding protein-like I COP00_22380 743eec52429f2e1c04bea7b7e186094d 347 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 13-10-2018 COP00_22380 743eec52429f2e1c04bea7b7e186094d 347 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 50 7.0E-15 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 COP00_13355 1b17c405b5b5e9e5f5edc6ad64401869 457 Pfam PF00083 Sugar (and other) transporter 12 439 3.1E-125 T 13-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 COP00_13355 1b17c405b5b5e9e5f5edc6ad64401869 457 SUPERFAMILY SSF103473 5 439 2.22E-85 T 13-10-2018 IPR036259 MFS transporter superfamily COP00_13355 1b17c405b5b5e9e5f5edc6ad64401869 457 TIGRFAM TIGR00879 SP: MFS transporter, sugar porter (SP) family 11 436 1.3E-118 T 13-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 COP00_13355 1b17c405b5b5e9e5f5edc6ad64401869 457 Gene3D G3DSA:1.20.1250.20 6 442 3.9E-140 T 13-10-2018 COP00_13355 1b17c405b5b5e9e5f5edc6ad64401869 457 PRINTS PR00171 Sugar transporter signature 341 362 1.8E-25 T 13-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 COP00_13355 1b17c405b5b5e9e5f5edc6ad64401869 457 PRINTS PR00171 Sugar transporter signature 252 262 1.8E-25 T 13-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 COP00_13355 1b17c405b5b5e9e5f5edc6ad64401869 457 PRINTS PR00171 Sugar transporter signature 364 376 1.8E-25 T 13-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 COP00_13355 1b17c405b5b5e9e5f5edc6ad64401869 457 PRINTS PR00171 Sugar transporter signature 18 28 1.8E-25 T 13-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 COP00_13355 1b17c405b5b5e9e5f5edc6ad64401869 457 PRINTS PR00171 Sugar transporter signature 101 120 1.8E-25 T 13-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 COP00_13355 1b17c405b5b5e9e5f5edc6ad64401869 457 ProSitePatterns PS00217 Sugar transport proteins signature 2. 106 131 - T 13-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 COP00_13355 1b17c405b5b5e9e5f5edc6ad64401869 457 ProSitePatterns PS00216 Sugar transport proteins signature 1. 296 312 - T 13-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 COP00_16695 47382cdba1900a04e1de337b41dfa186 277 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 125 251 9.1E-58 T 13-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 COP00_16695 47382cdba1900a04e1de337b41dfa186 277 Gene3D G3DSA:2.40.50.140 1 114 1.6E-48 T 13-10-2018 COP00_16695 47382cdba1900a04e1de337b41dfa186 277 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 13-10-2018 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 COP00_16695 47382cdba1900a04e1de337b41dfa186 277 SMART SM01382 124 253 5.4E-94 T 13-10-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 COP00_16695 47382cdba1900a04e1de337b41dfa186 277 SUPERFAMILY SSF50104 126 273 9.03E-62 T 13-10-2018 IPR008991 Translation protein SH3-like domain superfamily COP00_16695 47382cdba1900a04e1de337b41dfa186 277 Gene3D G3DSA:4.10.950.10 197 276 1.4E-35 T 13-10-2018 IPR014726 Ribosomal protein L2, domain 3 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 COP00_16695 47382cdba1900a04e1de337b41dfa186 277 SMART SM01383 42 118 1.0E-45 T 13-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 COP00_16695 47382cdba1900a04e1de337b41dfa186 277 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 3 275 8.4E-142 T 13-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 COP00_16695 47382cdba1900a04e1de337b41dfa186 277 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 117 2.3E-33 T 13-10-2018 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 COP00_16695 47382cdba1900a04e1de337b41dfa186 277 PIRSF PIRSF002158 3 276 4.0E-100 T 13-10-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 COP00_16695 47382cdba1900a04e1de337b41dfa186 277 Gene3D G3DSA:2.30.30.30 118 196 1.1E-35 T 13-10-2018 IPR014722 Ribosomal protein L2, domain 2 COP00_16695 47382cdba1900a04e1de337b41dfa186 277 SUPERFAMILY SSF50249 2 125 3.43E-51 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold COP00_16695 47382cdba1900a04e1de337b41dfa186 277 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 275 49.958 T 13-10-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 COP00_18285 eb535ede2364d062784d751b0208552f 1281 SUPERFAMILY SSF53474 1059 1271 1.98E-34 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold COP00_18285 eb535ede2364d062784d751b0208552f 1281 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1002 1017 - T 13-10-2018 IPR006162 Phosphopantetheine attachment site COP00_18285 eb535ede2364d062784d751b0208552f 1281 Gene3D G3DSA:1.10.1200.10 968 1046 1.4E-27 T 13-10-2018 IPR036736 ACP-like superfamily COP00_18285 eb535ede2364d062784d751b0208552f 1281 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 494 894 3.4E-133 T 13-10-2018 IPR010071 Amino acid adenylation domain COP00_18285 eb535ede2364d062784d751b0208552f 1281 Gene3D G3DSA:3.30.559.10 15 384 6.0E-149 T 13-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 COP00_18285 eb535ede2364d062784d751b0208552f 1281 ProSitePatterns PS00455 Putative AMP-binding domain signature. 615 626 - T 13-10-2018 IPR020845 AMP-binding, conserved site COP00_18285 eb535ede2364d062784d751b0208552f 1281 Gene3D G3DSA:3.30.559.30 194 449 6.0E-149 T 13-10-2018 COP00_18285 eb535ede2364d062784d751b0208552f 1281 SMART SM00824 Thioesterase 1066 1271 0.0049 T 13-10-2018 IPR020802 Polyketide synthase, thioesterase domain GO:0009058|GO:0016788 COP00_18285 eb535ede2364d062784d751b0208552f 1281 Gene3D G3DSA:3.40.50.980 480 782 3.3E-110 T 13-10-2018 COP00_18285 eb535ede2364d062784d751b0208552f 1281 Gene3D G3DSA:3.40.50.1820 1061 1266 5.6E-70 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold COP00_18285 eb535ede2364d062784d751b0208552f 1281 Gene3D G3DSA:3.30.300.30 863 967 1.5E-34 T 13-10-2018 COP00_18285 eb535ede2364d062784d751b0208552f 1281 Gene3D G3DSA:2.30.38.10 783 860 2.0E-32 T 13-10-2018 COP00_18285 eb535ede2364d062784d751b0208552f 1281 SUPERFAMILY SSF47336 971 1044 1.44E-20 T 13-10-2018 IPR036736 ACP-like superfamily COP00_18285 eb535ede2364d062784d751b0208552f 1281 Gene3D G3DSA:3.40.50.980 495 630 3.3E-110 T 13-10-2018 COP00_18285 eb535ede2364d062784d751b0208552f 1281 SUPERFAMILY SSF52777 193 436 1.67E-53 T 13-10-2018 COP00_18285 eb535ede2364d062784d751b0208552f 1281 Pfam PF00975 Thioesterase domain 1064 1205 8.1E-25 T 13-10-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 COP00_18285 eb535ede2364d062784d751b0208552f 1281 Pfam PF00550 Phosphopantetheine attachment site 980 1043 1.4E-15 T 13-10-2018 IPR009081 Phosphopantetheine binding ACP domain COP00_18285 eb535ede2364d062784d751b0208552f 1281 SUPERFAMILY SSF56801 431 990 1.02E-156 T 13-10-2018 COP00_18285 eb535ede2364d062784d751b0208552f 1281 Pfam PF00501 AMP-binding enzyme 473 870 7.2E-105 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 COP00_18285 eb535ede2364d062784d751b0208552f 1281 SMART SM00823 Phosphopantetheine attachment site 978 1047 3.1E-6 T 13-10-2018 IPR020806 Polyketide synthase, phosphopantetheine-binding domain GO:0031177 Reactome: R-HSA-163765|Reactome: R-HSA-199220|Reactome: R-HSA-2426168|Reactome: R-HSA-75105 COP00_18285 eb535ede2364d062784d751b0208552f 1281 Pfam PF13193 AMP-binding enzyme C-terminal domain 878 952 5.6E-13 T 13-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain COP00_18285 eb535ede2364d062784d751b0208552f 1281 Gene3D G3DSA:1.10.287.490 1156 1210 5.6E-70 T 13-10-2018 COP00_18285 eb535ede2364d062784d751b0208552f 1281 Pfam PF00668 Condensation domain 9 453 2.5E-133 T 13-10-2018 IPR001242 Condensation domain COP00_18285 eb535ede2364d062784d751b0208552f 1281 SUPERFAMILY SSF52777 15 192 2.11E-42 T 13-10-2018 COP00_00515 112a17f36442b126590ea3cd4e2e4326 572 Pfam PF01979 Amidohydrolase family 66 348 7.4E-37 T 13-10-2018 IPR006680 Amidohydrolase-related GO:0016787 COP00_00515 112a17f36442b126590ea3cd4e2e4326 572 Hamap MF_01518 Adenine deaminase [ade]. 20 570 38.157 T 13-10-2018 IPR006679 Adenine deaminase GO:0000034|GO:0006146 KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 COP00_00515 112a17f36442b126590ea3cd4e2e4326 572 TIGRFAM TIGR01178 ade: adenine deaminase 20 570 4.8E-215 T 13-10-2018 IPR006679 Adenine deaminase GO:0000034|GO:0006146 KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 COP00_00515 112a17f36442b126590ea3cd4e2e4326 572 Pfam PF13382 Adenine deaminase C-terminal domain 408 566 2.8E-58 T 13-10-2018 IPR026912 Adenine deaminase C-terminal domain KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 COP00_00515 112a17f36442b126590ea3cd4e2e4326 572 Gene3D G3DSA:3.20.20.140 70 313 6.2E-126 T 13-10-2018 COP00_00515 112a17f36442b126590ea3cd4e2e4326 572 Gene3D G3DSA:2.30.40.10 13 348 6.2E-126 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 COP00_00515 112a17f36442b126590ea3cd4e2e4326 572 SUPERFAMILY SSF51338 13 351 1.25E-18 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 COP00_00515 112a17f36442b126590ea3cd4e2e4326 572 SUPERFAMILY SSF51556 70 318 9.07E-41 T 13-10-2018 IPR032466 Metal-dependent hydrolase COP00_05005 d239ec8eff30efabaff893564d36a734 493 Gene3D G3DSA:1.20.1730.10 7 491 7.4E-36 T 13-10-2018 IPR038377 Sodium/glucose symporter superfamily COP00_05005 d239ec8eff30efabaff893564d36a734 493 Pfam PF00474 Sodium:solute symporter family 40 432 1.1E-21 T 13-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 COP00_00975 2efaa9b385006b60a76cafd11de3895e 158 TIGRFAM TIGR00077 lspA: signal peptidase II 3 156 9.0E-53 T 13-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 COP00_00975 2efaa9b385006b60a76cafd11de3895e 158 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 50 58 4.9E-18 T 13-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 COP00_00975 2efaa9b385006b60a76cafd11de3895e 158 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 94 109 4.9E-18 T 13-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 COP00_00975 2efaa9b385006b60a76cafd11de3895e 158 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 130 146 4.9E-18 T 13-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 COP00_00975 2efaa9b385006b60a76cafd11de3895e 158 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 3 155 17.421 T 13-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 COP00_00975 2efaa9b385006b60a76cafd11de3895e 158 ProSitePatterns PS00855 Signal peptidases II signature. 97 109 - T 13-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 COP00_00975 2efaa9b385006b60a76cafd11de3895e 158 Pfam PF01252 Signal peptidase (SPase) II 12 149 3.5E-39 T 13-10-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 MetaCyc: PWY-7884 COP00_00890 f039473d02eeacbc263b8c8b18717c8a 378 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 11 332 2.4E-141 T 13-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 COP00_00890 f039473d02eeacbc263b8c8b18717c8a 378 SUPERFAMILY SSF55307 204 315 1.3E-42 T 13-10-2018 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 COP00_00890 f039473d02eeacbc263b8c8b18717c8a 378 ProSitePatterns PS01135 FtsZ protein signature 2. 97 118 - T 13-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 COP00_00890 f039473d02eeacbc263b8c8b18717c8a 378 Gene3D G3DSA:3.30.1330.20 221 330 1.4E-41 T 13-10-2018 IPR037103 Tubulin/FtsZ, C-terminal domain superfamily Reactome: R-HSA-380320 COP00_00890 f039473d02eeacbc263b8c8b18717c8a 378 Gene3D G3DSA:3.40.50.1440 6 220 1.8E-84 T 13-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 COP00_00890 f039473d02eeacbc263b8c8b18717c8a 378 SMART SM00865 207 324 3.7E-53 T 13-10-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-380320 COP00_00890 f039473d02eeacbc263b8c8b18717c8a 378 Pfam PF12327 FtsZ family, C-terminal domain 222 315 8.0E-32 T 13-10-2018 IPR024757 Cell division protein FtsZ, C-terminal COP00_00890 f039473d02eeacbc263b8c8b18717c8a 378 SUPERFAMILY SSF52490 13 208 3.27E-73 T 13-10-2018 IPR036525 Tubulin/FtsZ, GTPase domain superfamily Reactome: R-HSA-380320 COP00_00890 f039473d02eeacbc263b8c8b18717c8a 378 SMART SM00864 13 205 1.3E-118 T 13-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 COP00_00890 f039473d02eeacbc263b8c8b18717c8a 378 ProSitePatterns PS01134 FtsZ protein signature 1. 44 78 - T 13-10-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 COP00_00890 f039473d02eeacbc263b8c8b18717c8a 378 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 13 173 3.3E-45 T 13-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 COP00_00890 f039473d02eeacbc263b8c8b18717c8a 378 PRINTS PR00423 Cell division protein FtsZ signature 212 233 1.5E-52 T 13-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 COP00_00890 f039473d02eeacbc263b8c8b18717c8a 378 PRINTS PR00423 Cell division protein FtsZ signature 126 147 1.5E-52 T 13-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 COP00_00890 f039473d02eeacbc263b8c8b18717c8a 378 PRINTS PR00423 Cell division protein FtsZ signature 189 211 1.5E-52 T 13-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 COP00_00890 f039473d02eeacbc263b8c8b18717c8a 378 PRINTS PR00423 Cell division protein FtsZ signature 98 118 1.5E-52 T 13-10-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 COP00_00890 f039473d02eeacbc263b8c8b18717c8a 378 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 9 352 39.383 T 13-10-2018 IPR000158 Cell division protein FtsZ GO:0005525 COP00_08900 bcdc7ebb48e6209cd10f91af0222fa56 516 Pfam PF06964 Alpha-L-arabinofuranosidase C-terminal domain 293 493 5.7E-43 T 13-10-2018 IPR010720 Alpha-L-arabinofuranosidase, C-terminal GO:0046373|GO:0046556 KEGG: 00520+3.2.1.55 COP00_08900 bcdc7ebb48e6209cd10f91af0222fa56 516 SUPERFAMILY SSF51445 19 383 2.31E-115 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily COP00_08900 bcdc7ebb48e6209cd10f91af0222fa56 516 SMART SM00813 293 493 3.3E-95 T 13-10-2018 IPR010720 Alpha-L-arabinofuranosidase, C-terminal GO:0046373|GO:0046556 KEGG: 00520+3.2.1.55 COP00_08900 bcdc7ebb48e6209cd10f91af0222fa56 516 Gene3D G3DSA:3.20.20.80 20 383 1.7E-230 T 13-10-2018 COP00_08900 bcdc7ebb48e6209cd10f91af0222fa56 516 SUPERFAMILY SSF51011 371 500 1.91E-46 T 13-10-2018 COP00_08900 bcdc7ebb48e6209cd10f91af0222fa56 516 Gene3D G3DSA:2.60.40.1180 9 497 1.7E-230 T 13-10-2018 IPR013780 Glycosyl hydrolase, all-beta COP00_20055 ed5d62231d7e6beee648a4e4f2275d79 286 Pfam PF06691 Protein of unknown function (DUF1189) 61 252 6.2E-13 T 13-10-2018 IPR009574 Protein of unknown function DUF1189 COP00_03620 6a036b2be41015c8b956f9b1eafa89ee 121 SMART SM00448 2 114 1.5E-32 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 COP00_03620 6a036b2be41015c8b956f9b1eafa89ee 121 Gene3D G3DSA:3.40.50.12740 2 121 3.0E-37 T 13-10-2018 COP00_03620 6a036b2be41015c8b956f9b1eafa89ee 121 Pfam PF00072 Response regulator receiver domain 4 115 5.3E-31 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 COP00_03620 6a036b2be41015c8b956f9b1eafa89ee 121 SUPERFAMILY SSF52172 1 119 4.84E-37 T 13-10-2018 IPR011006 CheY-like superfamily COP00_04125 18570520b15c94a5e1d941472f8bdd88 287 TIGRFAM TIGR00776 RhaT: RhaT L-rhamnose-proton symporter family protein 1 286 1.7E-110 T 13-10-2018 COP00_04125 18570520b15c94a5e1d941472f8bdd88 287 Pfam PF06800 Sugar transport protein 5 284 3.7E-108 T 13-10-2018 IPR010651 Sugar transport protein GO:0015144|GO:0016021|GO:0034219 COP00_04125 18570520b15c94a5e1d941472f8bdd88 287 SUPERFAMILY SSF103481 199 275 1.31E-5 T 13-10-2018 COP00_04125 18570520b15c94a5e1d941472f8bdd88 287 SUPERFAMILY SSF103481 35 140 2.62E-10 T 13-10-2018 COP00_19275 354d4fa5d6f722064c0f98601b2fcd30 318 Pfam PF01734 Patatin-like phospholipase 8 178 1.3E-13 T 13-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 COP00_19275 354d4fa5d6f722064c0f98601b2fcd30 318 Gene3D G3DSA:3.40.1090.10 2 234 1.1E-26 T 13-10-2018 COP00_19275 354d4fa5d6f722064c0f98601b2fcd30 318 SUPERFAMILY SSF52151 4 303 3.4E-24 T 13-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase COP00_20415 36fb760d18bf850c0d654fb0901165e7 251 Gene3D G3DSA:3.40.50.150 30 186 4.8E-12 T 13-10-2018 COP00_20415 36fb760d18bf850c0d654fb0901165e7 251 Pfam PF08241 Methyltransferase domain 55 135 1.5E-6 T 13-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 COP00_20415 36fb760d18bf850c0d654fb0901165e7 251 SUPERFAMILY SSF53335 13 186 1.3E-16 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase COP00_00330 1bf263ecef3614b94a468db7ff601cf3 158 Gene3D G3DSA:3.40.50.360 1 145 1.2E-33 T 13-10-2018 IPR029039 Flavoprotein-like superfamily COP00_00330 1bf263ecef3614b94a468db7ff601cf3 158 Pfam PF00258 Flavodoxin 6 138 5.2E-28 T 13-10-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 COP00_00330 1bf263ecef3614b94a468db7ff601cf3 158 SUPERFAMILY SSF52218 2 146 3.19E-37 T 13-10-2018 IPR029039 Flavoprotein-like superfamily COP00_00330 1bf263ecef3614b94a468db7ff601cf3 158 TIGRFAM TIGR01753 flav_short: flavodoxin 5 143 1.2E-44 T 13-10-2018 IPR010087 Flavodoxin, short chain GO:0010181 COP00_05960 e7447f0428e8744583dcd0bef8e6f2da 174 Gene3D G3DSA:1.20.58.500 6 101 6.1E-16 T 13-10-2018 COP00_05960 e7447f0428e8744583dcd0bef8e6f2da 174 SUPERFAMILY SSF140663 1 129 1.12E-36 T 13-10-2018 IPR023203 TTHA0068-like superfamily COP00_05960 e7447f0428e8744583dcd0bef8e6f2da 174 Pfam PF03745 Domain of unknown function (DUF309) 7 66 4.1E-23 T 13-10-2018 IPR005500 Protein of unknown function DUF309 COP00_22560 f1398a4af930831bfa17f39d7bb3f82f 446 Pfam PF01554 MatE 17 177 5.6E-32 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 COP00_22560 f1398a4af930831bfa17f39d7bb3f82f 446 Pfam PF01554 MatE 242 403 2.2E-32 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 COP00_22560 f1398a4af930831bfa17f39d7bb3f82f 446 PIRSF PIRSF006603 1 446 6.4E-82 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 COP00_22560 f1398a4af930831bfa17f39d7bb3f82f 446 TIGRFAM TIGR00797 matE: MATE efflux family protein 17 416 1.6E-60 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 COP00_20675 ddadcbda52c2d3baaee6bfd3b80b7ceb 90 PRINTS PR00112 Acylphosphatase signature 24 49 2.9E-7 T 13-10-2018 IPR020456 Acylphosphatase GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 COP00_20675 ddadcbda52c2d3baaee6bfd3b80b7ceb 90 PRINTS PR00112 Acylphosphatase signature 3 18 2.9E-7 T 13-10-2018 IPR020456 Acylphosphatase GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 COP00_20675 ddadcbda52c2d3baaee6bfd3b80b7ceb 90 ProSitePatterns PS00151 Acylphosphatase signature 2. 32 48 - T 13-10-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 COP00_20675 ddadcbda52c2d3baaee6bfd3b80b7ceb 90 SUPERFAMILY SSF54975 3 89 3.49E-29 T 13-10-2018 IPR036046 Acylphosphatase-like domain superfamily KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 COP00_20675 ddadcbda52c2d3baaee6bfd3b80b7ceb 90 ProSitePatterns PS00150 Acylphosphatase signature 1. 8 18 - T 13-10-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 COP00_20675 ddadcbda52c2d3baaee6bfd3b80b7ceb 90 Pfam PF00708 Acylphosphatase 4 88 3.2E-28 T 13-10-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 COP00_20675 ddadcbda52c2d3baaee6bfd3b80b7ceb 90 Gene3D G3DSA:3.30.70.100 1 90 6.0E-35 T 13-10-2018 COP00_24210 496b8f8be6ad1e89e25de4849e123f15 243 PIRSF PIRSF000370 3 243 2.1E-50 T 13-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 COP00_24210 496b8f8be6ad1e89e25de4849e123f15 243 SUPERFAMILY SSF102114 26 206 7.72E-16 T 13-10-2018 COP00_24210 496b8f8be6ad1e89e25de4849e123f15 243 Pfam PF13353 4Fe-4S single cluster domain 15 115 7.9E-10 T 13-10-2018 COP00_24210 496b8f8be6ad1e89e25de4849e123f15 243 TIGRFAM TIGR03365 Bsubt_queE: 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE 5 243 1.5E-116 T 13-10-2018 IPR017742 7-carboxy-7-deazaguanine synthase KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 COP00_24210 496b8f8be6ad1e89e25de4849e123f15 243 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 5 240 37.749 T 13-10-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 COP00_24210 496b8f8be6ad1e89e25de4849e123f15 243 Pfam PF04055 Radical SAM superfamily 29 125 9.8E-13 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 COP00_24210 496b8f8be6ad1e89e25de4849e123f15 243 Gene3D G3DSA:3.20.20.70 5 236 4.1E-32 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 COP00_01885 06de4cc185180e055888daa10c7f5037 386 TIGRFAM TIGR02334 prpF: probable AcnD-accessory protein PrpF 7 384 6.3E-172 T 13-10-2018 IPR012709 2-methyl-aconitate isomerase PrpF GO:0016853|GO:0019629 COP00_01885 06de4cc185180e055888daa10c7f5037 386 Gene3D G3DSA:3.10.310.10 175 365 9.9E-145 T 13-10-2018 COP00_01885 06de4cc185180e055888daa10c7f5037 386 SUPERFAMILY SSF54506 180 383 7.85E-69 T 13-10-2018 COP00_01885 06de4cc185180e055888daa10c7f5037 386 Gene3D G3DSA:3.10.310.10 12 379 9.9E-145 T 13-10-2018 COP00_01885 06de4cc185180e055888daa10c7f5037 386 Pfam PF04303 PrpF protein 7 381 2.9E-152 T 13-10-2018 IPR007400 PrpF protein COP00_01885 06de4cc185180e055888daa10c7f5037 386 SUPERFAMILY SSF54506 6 175 1.73E-67 T 13-10-2018 COP00_07420 f46167d153a7650473a7f19cef3ba7e9 366 SUPERFAMILY SSF52540 63 278 2.64E-29 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_07420 f46167d153a7650473a7f19cef3ba7e9 366 TIGRFAM TIGR03597 GTPase_YqeH: ribosome biogenesis GTPase YqeH 6 366 1.0E-157 T 13-10-2018 IPR019988 GTP-binding protein, riobosome biogenesis, YqeH COP00_07420 f46167d153a7650473a7f19cef3ba7e9 366 Gene3D G3DSA:3.40.50.300 56 224 1.0E-48 T 13-10-2018 COP00_07420 f46167d153a7650473a7f19cef3ba7e9 366 Pfam PF01926 50S ribosome-binding GTPase 162 225 1.2E-13 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 COP00_06450 be54b8ac8dbee6823efcc1e0198e9a3c 372 PIRSF PIRSF001123 259 372 2.5E-6 T 13-10-2018 IPR008007 Peptidase M42 COP00_06450 be54b8ac8dbee6823efcc1e0198e9a3c 372 PIRSF PIRSF001123 78 182 8.8E-6 T 13-10-2018 IPR008007 Peptidase M42 COP00_06450 be54b8ac8dbee6823efcc1e0198e9a3c 372 PIRSF PIRSF001123 3 100 2.5E-5 T 13-10-2018 IPR008007 Peptidase M42 COP00_06450 be54b8ac8dbee6823efcc1e0198e9a3c 372 Pfam PF07687 Peptidase dimerisation domain 179 272 1.7E-15 T 13-10-2018 IPR011650 Peptidase M20, dimerisation domain COP00_06450 be54b8ac8dbee6823efcc1e0198e9a3c 372 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 103 141 - T 13-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 COP00_06450 be54b8ac8dbee6823efcc1e0198e9a3c 372 Gene3D G3DSA:3.40.630.10 13 361 9.5E-136 T 13-10-2018 COP00_06450 be54b8ac8dbee6823efcc1e0198e9a3c 372 Pfam PF01546 Peptidase family M20/M25/M40 72 366 4.4E-25 T 13-10-2018 IPR002933 Peptidase M20 GO:0016787 COP00_06450 be54b8ac8dbee6823efcc1e0198e9a3c 372 Gene3D G3DSA:3.30.70.360 175 286 9.5E-136 T 13-10-2018 COP00_06450 be54b8ac8dbee6823efcc1e0198e9a3c 372 SUPERFAMILY SSF53187 4 370 2.04E-66 T 13-10-2018 COP00_06450 be54b8ac8dbee6823efcc1e0198e9a3c 372 SUPERFAMILY SSF55031 178 282 2.22E-19 T 13-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain COP00_06450 be54b8ac8dbee6823efcc1e0198e9a3c 372 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 70 79 - T 13-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 COP00_06450 be54b8ac8dbee6823efcc1e0198e9a3c 372 TIGRFAM TIGR01883 PepT-like: peptidase T-like protein 5 366 9.5E-175 T 13-10-2018 IPR010162 Peptidase M20B, peptidase T-like COP00_10855 213e015d43680f67afbf477e7b4578e0 398 Pfam PF07690 Major Facilitator Superfamily 10 266 8.9E-48 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 COP00_10855 213e015d43680f67afbf477e7b4578e0 398 SUPERFAMILY SSF103473 7 390 3.53E-76 T 13-10-2018 IPR036259 MFS transporter superfamily COP00_10855 213e015d43680f67afbf477e7b4578e0 398 PRINTS PR01035 Tetracycline resistance protein signature 131 153 5.7E-24 T 13-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 COP00_10855 213e015d43680f67afbf477e7b4578e0 398 PRINTS PR01035 Tetracycline resistance protein signature 337 360 5.7E-24 T 13-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 COP00_10855 213e015d43680f67afbf477e7b4578e0 398 PRINTS PR01035 Tetracycline resistance protein signature 249 269 5.7E-24 T 13-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 COP00_10855 213e015d43680f67afbf477e7b4578e0 398 PRINTS PR01035 Tetracycline resistance protein signature 159 179 5.7E-24 T 13-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 COP00_10855 213e015d43680f67afbf477e7b4578e0 398 PRINTS PR01035 Tetracycline resistance protein signature 73 97 5.7E-24 T 13-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 COP00_10855 213e015d43680f67afbf477e7b4578e0 398 PRINTS PR01035 Tetracycline resistance protein signature 277 298 5.7E-24 T 13-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 COP00_10855 213e015d43680f67afbf477e7b4578e0 398 PRINTS PR01035 Tetracycline resistance protein signature 16 32 5.7E-24 T 13-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 COP00_10855 213e015d43680f67afbf477e7b4578e0 398 Gene3D G3DSA:1.20.1250.20 2 385 3.4E-78 T 13-10-2018 COP00_15080 56fd446ac2387a710b856d8743e7894f 246 Pfam PF02361 Cobalt transport protein 6 217 1.8E-34 T 13-10-2018 IPR003339 ABC/ECF transporter, transmembrane component COP00_13180 0ef404941227b632a948910795974a5d 309 SUPERFAMILY SSF51735 1 306 1.16E-87 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily COP00_13180 0ef404941227b632a948910795974a5d 309 Gene3D G3DSA:3.90.25.10 174 300 6.5E-96 T 13-10-2018 COP00_13180 0ef404941227b632a948910795974a5d 309 Gene3D G3DSA:3.40.50.720 4 236 6.5E-96 T 13-10-2018 COP00_13180 0ef404941227b632a948910795974a5d 309 Pfam PF01370 NAD dependent epimerase/dehydratase family 4 227 6.9E-55 T 13-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 COP00_13880 4c51b7e43d5c8aeafba6dae870431c53 147 Gene3D G3DSA:3.40.630.30 2 137 1.2E-9 T 13-10-2018 COP00_13880 4c51b7e43d5c8aeafba6dae870431c53 147 SUPERFAMILY SSF55729 3 125 2.02E-5 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase COP00_23050 16deff84057c7371cb911b1a53c2ac3e 759 Gene3D G3DSA:1.10.486.10 508 653 8.4E-76 T 13-10-2018 COP00_23050 16deff84057c7371cb911b1a53c2ac3e 759 Gene3D G3DSA:1.10.10.160 240 312 2.0E-81 T 13-10-2018 IPR013986 DExx box DNA helicase domain superfamily COP00_23050 16deff84057c7371cb911b1a53c2ac3e 759 Pfam PF13361 UvrD-like helicase C-terminal domain 402 729 1.7E-43 T 13-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 COP00_23050 16deff84057c7371cb911b1a53c2ac3e 759 Pfam PF00580 UvrD/REP helicase N-terminal domain 134 397 4.3E-60 T 13-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 COP00_23050 16deff84057c7371cb911b1a53c2ac3e 759 Gene3D G3DSA:3.40.50.300 134 399 2.0E-81 T 13-10-2018 COP00_23050 16deff84057c7371cb911b1a53c2ac3e 759 SUPERFAMILY SSF52540 132 748 1.22E-134 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_23050 16deff84057c7371cb911b1a53c2ac3e 759 Gene3D G3DSA:3.40.50.300 407 745 8.4E-76 T 13-10-2018 COP00_14005 c2260973eb80f5eba939c45951a36de8 379 SUPERFAMILY SSF47203 227 379 2.26E-62 T 13-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 COP00_14005 c2260973eb80f5eba939c45951a36de8 379 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 118 1.3E-42 T 13-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 COP00_14005 c2260973eb80f5eba939c45951a36de8 379 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 122 217 6.9E-26 T 13-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 COP00_14005 c2260973eb80f5eba939c45951a36de8 379 PIRSF PIRSF016578 3 379 9.6E-22 T 13-10-2018 COP00_14005 c2260973eb80f5eba939c45951a36de8 379 SUPERFAMILY SSF56645 1 242 1.96E-92 T 13-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 COP00_14005 c2260973eb80f5eba939c45951a36de8 379 Gene3D G3DSA:1.10.540.10 1 120 2.3E-46 T 13-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 COP00_14005 c2260973eb80f5eba939c45951a36de8 379 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 124 136 - T 13-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 COP00_14005 c2260973eb80f5eba939c45951a36de8 379 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 229 377 2.5E-52 T 13-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 COP00_14005 c2260973eb80f5eba939c45951a36de8 379 Gene3D G3DSA:2.40.110.10 121 234 9.6E-45 T 13-10-2018 COP00_14005 c2260973eb80f5eba939c45951a36de8 379 Gene3D G3DSA:1.20.140.10 235 379 2.9E-58 T 13-10-2018 COP00_14005 c2260973eb80f5eba939c45951a36de8 379 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 336 355 - T 13-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 COP00_17075 2008bfda4f6acb8eb5e5d3e033969a16 125 SUPERFAMILY SSF46785 6 80 8.58E-22 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_17075 2008bfda4f6acb8eb5e5d3e033969a16 125 SMART SM00345 17 76 1.5E-14 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 COP00_17075 2008bfda4f6acb8eb5e5d3e033969a16 125 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 76 2.7E-15 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 COP00_17075 2008bfda4f6acb8eb5e5d3e033969a16 125 Gene3D G3DSA:1.10.10.10 10 125 3.5E-28 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_12085 4ec3cdeffec4645aed0397e686cc9cf3 238 Pfam PF02754 Cysteine-rich domain 132 215 7.6E-16 T 13-10-2018 IPR004017 Cysteine-rich domain COP00_12085 4ec3cdeffec4645aed0397e686cc9cf3 238 Pfam PF02754 Cysteine-rich domain 3 84 9.8E-18 T 13-10-2018 IPR004017 Cysteine-rich domain COP00_12085 4ec3cdeffec4645aed0397e686cc9cf3 238 Hamap MF_02105 Lactate utilization protein A [lutA]. 1 238 64.484 T 13-10-2018 IPR022822 Lactate utilization protein A GO:0006089 COP00_22885 268ee06d4b8a0806f043e9990c636ff3 212 Hamap MF_01124 Adapter protein MecA [mecA]. 1 211 27.577 T 13-10-2018 IPR008681 Negative regulator of genetic competence, MecA COP00_22885 268ee06d4b8a0806f043e9990c636ff3 212 PIRSF PIRSF029008 1 212 2.4E-74 T 13-10-2018 IPR008681 Negative regulator of genetic competence, MecA COP00_22885 268ee06d4b8a0806f043e9990c636ff3 212 Pfam PF05389 Negative regulator of genetic competence (MecA) 1 207 1.6E-54 T 13-10-2018 IPR008681 Negative regulator of genetic competence, MecA COP00_22885 268ee06d4b8a0806f043e9990c636ff3 212 Gene3D G3DSA:3.30.70.1950 115 212 4.4E-33 T 13-10-2018 IPR038471 MecA, C-terminal domain superfamily COP00_06835 0ed6cbeaa978d2de896a02f3d9c06b8c 212 Gene3D G3DSA:3.60.15.10 1 211 1.1E-63 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like COP00_06835 0ed6cbeaa978d2de896a02f3d9c06b8c 212 SUPERFAMILY SSF56281 9 204 8.12E-52 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like COP00_06835 0ed6cbeaa978d2de896a02f3d9c06b8c 212 SMART SM00849 12 191 1.2E-43 T 13-10-2018 IPR001279 Metallo-beta-lactamase COP00_06835 0ed6cbeaa978d2de896a02f3d9c06b8c 212 Pfam PF00753 Metallo-beta-lactamase superfamily 9 191 1.1E-32 T 13-10-2018 IPR001279 Metallo-beta-lactamase COP00_18360 c945450e791469895934648767e479c5 471 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 445 465 2.5E-9 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 COP00_18360 c945450e791469895934648767e479c5 471 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 428 445 2.5E-9 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 COP00_18360 c945450e791469895934648767e479c5 471 Gene3D G3DSA:1.10.8.60 315 384 7.9E-22 T 13-10-2018 COP00_18360 c945450e791469895934648767e479c5 471 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 167 180 - T 13-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 COP00_18360 c945450e791469895934648767e479c5 471 SUPERFAMILY SSF55785 12 113 9.42E-13 T 13-10-2018 IPR035965 PAS domain superfamily COP00_18360 c945450e791469895934648767e479c5 471 SMART SM00382 163 305 3.6E-11 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_18360 c945450e791469895934648767e479c5 471 SUPERFAMILY SSF46689 355 464 8.24E-13 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 COP00_18360 c945450e791469895934648767e479c5 471 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 12 124 6.2E-11 T 13-10-2018 IPR000014 PAS domain COP00_18360 c945450e791469895934648767e479c5 471 Pfam PF13426 PAS domain 23 121 3.8E-9 T 13-10-2018 IPR000014 PAS domain COP00_18360 c945450e791469895934648767e479c5 471 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 355 364 - T 13-10-2018 IPR025944 Sigma-54 interaction domain, conserved site COP00_18360 c945450e791469895934648767e479c5 471 Gene3D G3DSA:3.30.450.20 6 123 6.6E-13 T 13-10-2018 COP00_18360 c945450e791469895934648767e479c5 471 SUPERFAMILY SSF52540 143 385 8.91E-63 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_18360 c945450e791469895934648767e479c5 471 Gene3D G3DSA:3.40.50.300 128 313 6.7E-58 T 13-10-2018 COP00_18360 c945450e791469895934648767e479c5 471 Pfam PF00158 Sigma-54 interaction domain 143 308 9.5E-60 T 13-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 COP00_18360 c945450e791469895934648767e479c5 471 Pfam PF02954 Bacterial regulatory protein, Fis family 422 462 6.0E-13 T 13-10-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 COP00_18360 c945450e791469895934648767e479c5 471 Gene3D G3DSA:1.10.10.60 385 468 5.6E-17 T 13-10-2018 COP00_18360 c945450e791469895934648767e479c5 471 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 228 243 - T 13-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 COP00_09200 da66c6bacb05f87ff9cde734d97b9b92 174 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 75 88 - T 13-10-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 COP00_09200 da66c6bacb05f87ff9cde734d97b9b92 174 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 15 157 4.0E-37 T 13-10-2018 IPR001453 MoaB/Mog domain COP00_09200 da66c6bacb05f87ff9cde734d97b9b92 174 SUPERFAMILY SSF53218 9 167 1.18E-41 T 13-10-2018 IPR036425 MoaB/Mog-like domain superfamily COP00_09200 da66c6bacb05f87ff9cde734d97b9b92 174 Pfam PF00994 Probable molybdopterin binding domain 18 161 4.3E-35 T 13-10-2018 IPR001453 MoaB/Mog domain COP00_09200 da66c6bacb05f87ff9cde734d97b9b92 174 Gene3D G3DSA:3.40.980.10 1 169 1.9E-48 T 13-10-2018 IPR036425 MoaB/Mog-like domain superfamily COP00_09200 da66c6bacb05f87ff9cde734d97b9b92 174 SMART SM00852 17 162 3.3E-28 T 13-10-2018 IPR001453 MoaB/Mog domain COP00_09200 da66c6bacb05f87ff9cde734d97b9b92 174 PIRSF PIRSF006443 1 170 6.4E-68 T 13-10-2018 IPR012245 Molybdenum cofactor biosynthesis protein MoaB GO:0006777 COP00_14955 1199a5aff46e3f588f5c09305d7083a8 240 SUPERFAMILY SSF46894 133 232 3.68E-25 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 COP00_14955 1199a5aff46e3f588f5c09305d7083a8 240 Gene3D G3DSA:3.40.50.2300 7 130 9.1E-35 T 13-10-2018 COP00_14955 1199a5aff46e3f588f5c09305d7083a8 240 Pfam PF00486 Transcriptional regulatory protein, C terminal 156 231 3.2E-22 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 COP00_14955 1199a5aff46e3f588f5c09305d7083a8 240 SUPERFAMILY SSF52172 5 129 3.7E-38 T 13-10-2018 IPR011006 CheY-like superfamily COP00_14955 1199a5aff46e3f588f5c09305d7083a8 240 Pfam PF00072 Response regulator receiver domain 10 119 7.8E-28 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 COP00_14955 1199a5aff46e3f588f5c09305d7083a8 240 SMART SM00862 156 231 4.5E-21 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 COP00_14955 1199a5aff46e3f588f5c09305d7083a8 240 SMART SM00448 8 119 1.7E-39 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 COP00_14955 1199a5aff46e3f588f5c09305d7083a8 240 Gene3D G3DSA:1.10.10.10 133 240 1.0E-30 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_01155 cd30c624c2e055ec25be5bc53cbd0902 214 Gene3D G3DSA:3.40.50.10240 2 214 1.6E-75 T 13-10-2018 IPR036759 Thiamin pyrophosphokinase, catalytic domain superfamily GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 COP00_01155 cd30c624c2e055ec25be5bc53cbd0902 214 Pfam PF04263 Thiamin pyrophosphokinase, catalytic domain 21 127 7.3E-20 T 13-10-2018 IPR007371 Thiamin pyrophosphokinase, catalytic domain GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 COP00_01155 cd30c624c2e055ec25be5bc53cbd0902 214 TIGRFAM TIGR01378 thi_PPkinase: thiamine pyrophosphokinase 4 210 7.4E-64 T 13-10-2018 IPR006282 Thiamin pyrophosphokinase GO:0004788|GO:0006772 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 COP00_01155 cd30c624c2e055ec25be5bc53cbd0902 214 SUPERFAMILY SSF63999 4 131 2.88E-33 T 13-10-2018 IPR036759 Thiamin pyrophosphokinase, catalytic domain superfamily GO:0004788|GO:0005524|GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 COP00_01155 cd30c624c2e055ec25be5bc53cbd0902 214 SUPERFAMILY SSF63862 133 212 2.22E-13 T 13-10-2018 IPR036371 Thiamin pyrophosphokinase, thiamin-binding domain superfamily GO:0009229 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 COP00_01155 cd30c624c2e055ec25be5bc53cbd0902 214 Pfam PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain 148 207 4.1E-14 T 13-10-2018 IPR007373 Thiamin pyrophosphokinase, thiamin-binding domain GO:0009229|GO:0030975 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 COP00_01155 cd30c624c2e055ec25be5bc53cbd0902 214 SMART SM00983 142 208 3.3E-23 T 13-10-2018 IPR007373 Thiamin pyrophosphokinase, thiamin-binding domain GO:0009229|GO:0030975 KEGG: 00730+2.7.6.2|MetaCyc: PWY-6898|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|Reactome: R-HSA-196819 COP00_05075 8543ee0978704912c1bfa185d3911383 73 Pfam PF06855 YozE SAM-like fold 3 68 3.2E-28 T 13-10-2018 IPR023089 YozE SAM-like domain COP00_05075 8543ee0978704912c1bfa185d3911383 73 PIRSF PIRSF037262 1 72 4.5E-35 T 13-10-2018 IPR010673 Protein of unknown function UPF0346 COP00_05075 8543ee0978704912c1bfa185d3911383 73 Hamap MF_01538 UPF0346 protein . 1 70 22.754 T 13-10-2018 IPR010673 Protein of unknown function UPF0346 COP00_05075 8543ee0978704912c1bfa185d3911383 73 Gene3D G3DSA:1.10.150.260 1 72 9.1E-29 T 13-10-2018 IPR036806 YozE SAM-like superfamily COP00_05075 8543ee0978704912c1bfa185d3911383 73 SUPERFAMILY SSF140652 2 71 9.94E-31 T 13-10-2018 IPR036806 YozE SAM-like superfamily COP00_11845 1fda3bb759a9d423e0cc1fa21c56fa72 234 TIGRFAM TIGR02681 phage_pRha: phage regulatory protein, Rha family 5 108 5.7E-37 T 13-10-2018 IPR014054 Bacteriophage regulatory protein, Rha family COP00_11845 1fda3bb759a9d423e0cc1fa21c56fa72 234 Pfam PF09669 Phage regulatory protein Rha (Phage_pRha) 15 102 6.4E-27 T 13-10-2018 IPR014054 Bacteriophage regulatory protein, Rha family COP00_11845 1fda3bb759a9d423e0cc1fa21c56fa72 234 Pfam PF10552 ORF6C domain 121 231 1.7E-18 T 13-10-2018 IPR018878 ORF6C domain COP00_00185 8fe3713a4bbb6ad54ffcb62fa88b990f 298 SMART SM01061 22 80 4.8E-27 T 13-10-2018 IPR004341 CAT RNA-binding domain GO:0003723 COP00_00185 8fe3713a4bbb6ad54ffcb62fa88b990f 298 SUPERFAMILY SSF50151 22 74 1.31E-16 T 13-10-2018 IPR036650 CAT RNA-binding domain superfamily GO:0003723 COP00_00185 8fe3713a4bbb6ad54ffcb62fa88b990f 298 Pfam PF00874 PRD domain 202 292 1.1E-18 T 13-10-2018 IPR011608 PRD domain GO:0006355 COP00_00185 8fe3713a4bbb6ad54ffcb62fa88b990f 298 Pfam PF00874 PRD domain 97 184 3.2E-26 T 13-10-2018 IPR011608 PRD domain GO:0006355 COP00_00185 8fe3713a4bbb6ad54ffcb62fa88b990f 298 Gene3D G3DSA:2.30.24.10 9 87 2.4E-28 T 13-10-2018 IPR036650 CAT RNA-binding domain superfamily GO:0003723 COP00_00185 8fe3713a4bbb6ad54ffcb62fa88b990f 298 Gene3D G3DSA:1.20.58.1950 243 295 6.0E-25 T 13-10-2018 COP00_00185 8fe3713a4bbb6ad54ffcb62fa88b990f 298 Pfam PF03123 CAT RNA binding domain 23 77 3.9E-22 T 13-10-2018 IPR004341 CAT RNA-binding domain GO:0003723 COP00_00185 8fe3713a4bbb6ad54ffcb62fa88b990f 298 Gene3D G3DSA:1.10.1790.10 88 186 1.6E-35 T 13-10-2018 COP00_00185 8fe3713a4bbb6ad54ffcb62fa88b990f 298 SUPERFAMILY SSF63520 196 293 1.83E-22 T 13-10-2018 IPR036634 PRD domain superfamily GO:0006355 COP00_00185 8fe3713a4bbb6ad54ffcb62fa88b990f 298 SUPERFAMILY SSF63520 76 187 1.15E-31 T 13-10-2018 IPR036634 PRD domain superfamily GO:0006355 COP00_00185 8fe3713a4bbb6ad54ffcb62fa88b990f 298 Gene3D G3DSA:1.20.890.100 187 242 1.8E-25 T 13-10-2018 COP00_21900 8e98e33a61f9a24d6c77a051fe896f60 35 Pfam PF17444 Uncharacterized protein YhdX 1 33 4.0E-23 T 13-10-2018 IPR035384 Uncharacterized protein YhdX COP00_21900 8e98e33a61f9a24d6c77a051fe896f60 35 ProDom PD047280 YHDX 1 35 4.0E-9 T 13-10-2018 IPR035384 Uncharacterized protein YhdX COP00_01430 3ea83b02685675ca6bd8518af90f6936 221 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 25 221 4.7E-94 T 13-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 COP00_01430 3ea83b02685675ca6bd8518af90f6936 221 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 198 210 - T 13-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 COP00_01430 3ea83b02685675ca6bd8518af90f6936 221 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 150 165 - T 13-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 COP00_01430 3ea83b02685675ca6bd8518af90f6936 221 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 211 221 1.3E-27 T 13-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 COP00_01430 3ea83b02685675ca6bd8518af90f6936 221 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 81 93 1.3E-27 T 13-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 COP00_01430 3ea83b02685675ca6bd8518af90f6936 221 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 21 30 1.3E-27 T 13-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 COP00_01430 3ea83b02685675ca6bd8518af90f6936 221 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 93 107 1.3E-27 T 13-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 COP00_01430 3ea83b02685675ca6bd8518af90f6936 221 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 143 155 1.3E-27 T 13-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 COP00_01430 3ea83b02685675ca6bd8518af90f6936 221 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 121 133 1.3E-27 T 13-10-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 COP00_01430 3ea83b02685675ca6bd8518af90f6936 221 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 42 62 2.8E-65 T 13-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 COP00_01430 3ea83b02685675ca6bd8518af90f6936 221 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 62 81 2.8E-65 T 13-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 COP00_01430 3ea83b02685675ca6bd8518af90f6936 221 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 150 170 2.8E-65 T 13-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 COP00_01430 3ea83b02685675ca6bd8518af90f6936 221 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 195 220 2.8E-65 T 13-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 COP00_01430 3ea83b02685675ca6bd8518af90f6936 221 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 23 42 2.8E-65 T 13-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 COP00_01430 3ea83b02685675ca6bd8518af90f6936 221 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 171 192 2.8E-65 T 13-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 COP00_01430 3ea83b02685675ca6bd8518af90f6936 221 Pfam PF00813 FliP family 25 217 1.9E-82 T 13-10-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 COP00_14735 a973ec3386e5917073a7977ee750a080 574 SUPERFAMILY SSF52540 327 568 2.57E-73 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_14735 a973ec3386e5917073a7977ee750a080 574 Pfam PF00005 ABC transporter 349 498 1.4E-29 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 COP00_14735 a973ec3386e5917073a7977ee750a080 574 SMART SM00382 358 544 1.4E-15 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_14735 a973ec3386e5917073a7977ee750a080 574 SUPERFAMILY SSF90123 9 296 2.35E-47 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 COP00_14735 a973ec3386e5917073a7977ee750a080 574 Gene3D G3DSA:1.20.1560.10 5 316 4.6E-41 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 COP00_14735 a973ec3386e5917073a7977ee750a080 574 TIGRFAM TIGR02857 CydD: thiol reductant ABC exporter, CydD subunit 12 540 1.0E-174 T 13-10-2018 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD GO:0005524|GO:0016020|GO:0042883 COP00_14735 a973ec3386e5917073a7977ee750a080 574 Pfam PF00664 ABC transporter transmembrane region 16 278 7.9E-26 T 13-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 COP00_14735 a973ec3386e5917073a7977ee750a080 574 Gene3D G3DSA:3.40.50.300 321 571 4.5E-77 T 13-10-2018 COP00_19315 dd6a0a0c631d9fa1fa31c848e5a1acde 196 ProSitePatterns PS01081 TetR-type HTH domain signature. 25 55 - T 13-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site COP00_19315 dd6a0a0c631d9fa1fa31c848e5a1acde 196 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 4.9E-7 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 COP00_19315 dd6a0a0c631d9fa1fa31c848e5a1acde 196 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 57 4.9E-7 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 COP00_19315 dd6a0a0c631d9fa1fa31c848e5a1acde 196 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 57 1.2E-12 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 COP00_19315 dd6a0a0c631d9fa1fa31c848e5a1acde 196 Gene3D G3DSA:1.10.357.10 3 188 1.0E-53 T 13-10-2018 COP00_19315 dd6a0a0c631d9fa1fa31c848e5a1acde 196 SUPERFAMILY SSF46689 8 66 2.77E-15 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 COP00_22735 634798d48792419f4fb0e02573263f2a 385 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 3 380 68.571 T 13-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 COP00_22735 634798d48792419f4fb0e02573263f2a 385 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 4 377 6.6E-156 T 13-10-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 COP00_22735 634798d48792419f4fb0e02573263f2a 385 Gene3D G3DSA:3.90.1150.10 13 367 3.0E-140 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 COP00_22735 634798d48792419f4fb0e02573263f2a 385 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 205 242 - T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 COP00_22735 634798d48792419f4fb0e02573263f2a 385 PIRSF PIRSF000521 5 114 1.9E-5 T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 COP00_22735 634798d48792419f4fb0e02573263f2a 385 PIRSF PIRSF000521 106 145 0.0027 T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 COP00_22735 634798d48792419f4fb0e02573263f2a 385 PIRSF PIRSF000521 156 380 4.8E-39 T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 COP00_22735 634798d48792419f4fb0e02573263f2a 385 SUPERFAMILY SSF53383 2 378 5.17E-128 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase COP00_22735 634798d48792419f4fb0e02573263f2a 385 Pfam PF00202 Aminotransferase class-III 12 377 8.6E-127 T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 COP00_22735 634798d48792419f4fb0e02573263f2a 385 Gene3D G3DSA:3.40.640.10 47 287 3.0E-140 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 COP00_23930 012c7131c60e376ff152c6d6c5852077 109 Gene3D G3DSA:1.10.3730.20 1 105 3.8E-23 T 13-10-2018 COP00_23930 012c7131c60e376ff152c6d6c5852077 109 Pfam PF00893 Small Multidrug Resistance protein 1 89 1.1E-21 T 13-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 COP00_23930 012c7131c60e376ff152c6d6c5852077 109 SUPERFAMILY SSF103481 6 100 5.36E-15 T 13-10-2018 COP00_17015 e2fa82b91b8c4baeb5442a3502de53f9 273 PIRSF PIRSF004793 2 268 1.5E-101 T 13-10-2018 IPR014046 Diadenylate cyclase GO:0004016|GO:0006171 COP00_17015 e2fa82b91b8c4baeb5442a3502de53f9 273 Gene3D G3DSA:3.40.1700.10 101 254 3.4E-64 T 13-10-2018 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily COP00_17015 e2fa82b91b8c4baeb5442a3502de53f9 273 Pfam PF02457 DisA bacterial checkpoint controller nucleotide-binding 118 235 4.0E-44 T 13-10-2018 IPR003390 DNA integrity scanning protein, DisA, N-terminal COP00_17015 e2fa82b91b8c4baeb5442a3502de53f9 273 Hamap MF_01499 Diadenylate cyclase [dacA]. 1 254 34.968 T 13-10-2018 IPR034701 Diadenylate cyclase CdaA GO:0004016|GO:0006171 COP00_17015 e2fa82b91b8c4baeb5442a3502de53f9 273 SUPERFAMILY SSF143597 40 240 7.32E-73 T 13-10-2018 IPR036888 DNA integrity scanning protein, DisA, N-terminal domain superfamily COP00_17015 e2fa82b91b8c4baeb5442a3502de53f9 273 TIGRFAM TIGR00159 TIGR00159: TIGR00159 family protein 3 256 9.2E-114 T 13-10-2018 IPR034701 Diadenylate cyclase CdaA GO:0004016|GO:0006171 COP00_08435 8bd01d7a2c69147d8d211bb7f447994f 288 Pfam PF02163 Peptidase family M50 113 169 1.1E-7 T 13-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 COP00_16825 de5ee2d0a254bc660f97d3b38b1f0e23 120 Gene3D G3DSA:3.90.1030.10 1 120 1.8E-51 T 13-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_16825 de5ee2d0a254bc660f97d3b38b1f0e23 120 Pfam PF01196 Ribosomal protein L17 16 120 8.4E-41 T 13-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_16825 de5ee2d0a254bc660f97d3b38b1f0e23 120 ProSitePatterns PS01167 Ribosomal protein L17 signature. 30 52 - T 13-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_16825 de5ee2d0a254bc660f97d3b38b1f0e23 120 SUPERFAMILY SSF64263 2 120 7.85E-47 T 13-10-2018 IPR036373 Ribosomal protein L17 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_16825 de5ee2d0a254bc660f97d3b38b1f0e23 120 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 1 120 29.693 T 13-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_16825 de5ee2d0a254bc660f97d3b38b1f0e23 120 TIGRFAM TIGR00059 L17: ribosomal protein bL17 2 120 7.4E-51 T 13-10-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_14495 148f80f076295e02d60235c177669466 443 Pfam PF02225 PA domain 131 214 6.3E-18 T 13-10-2018 IPR003137 PA domain COP00_14495 148f80f076295e02d60235c177669466 443 SUPERFAMILY SSF53187 38 436 9.33E-61 T 13-10-2018 COP00_14495 148f80f076295e02d60235c177669466 443 Gene3D G3DSA:3.40.630.10 66 425 1.2E-106 T 13-10-2018 COP00_14495 148f80f076295e02d60235c177669466 443 Gene3D G3DSA:3.50.30.30 104 225 1.2E-106 T 13-10-2018 COP00_14495 148f80f076295e02d60235c177669466 443 Pfam PF04389 Peptidase family M28 234 429 2.4E-40 T 13-10-2018 IPR007484 Peptidase M28 COP00_14495 148f80f076295e02d60235c177669466 443 SUPERFAMILY SSF52025 125 217 2.88E-19 T 13-10-2018 COP00_01760 20ac236a39971d496bd847b9e9e57656 391 TIGRFAM TIGR00858 bioF: 8-amino-7-oxononanoate synthase 23 381 6.8E-134 T 13-10-2018 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 COP00_01760 20ac236a39971d496bd847b9e9e57656 391 TIGRFAM TIGR01825 gly_Cac_T_rel: putative pyridoxal phosphate-dependent acyltransferase 7 391 2.0E-193 T 13-10-2018 IPR010962 Putative 8-amino-7-oxononanoate synthase, Archaea/Firmicutes type COP00_01760 20ac236a39971d496bd847b9e9e57656 391 Gene3D G3DSA:3.90.1150.10 35 382 3.1E-146 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 COP00_01760 20ac236a39971d496bd847b9e9e57656 391 SUPERFAMILY SSF53383 2 383 2.99E-113 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase COP00_01760 20ac236a39971d496bd847b9e9e57656 391 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 236 245 - T 13-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 COP00_01760 20ac236a39971d496bd847b9e9e57656 391 Gene3D G3DSA:3.40.640.10 55 289 3.1E-146 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 COP00_01760 20ac236a39971d496bd847b9e9e57656 391 Pfam PF00155 Aminotransferase class I and II 40 380 1.2E-62 T 13-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 COP00_09770 4a74744d89ed0e881e92f984e49409ef 158 ProSitePatterns PS00893 Nudix box signature. 53 74 - T 13-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 COP00_09770 4a74744d89ed0e881e92f984e49409ef 158 Pfam PF00293 NUDIX domain 30 87 6.5E-14 T 13-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 COP00_09770 4a74744d89ed0e881e92f984e49409ef 158 SUPERFAMILY SSF55811 28 111 2.98E-21 T 13-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 COP00_09770 4a74744d89ed0e881e92f984e49409ef 158 PRINTS PR00502 NUDIX hydrolase family signature 48 62 6.8E-7 T 13-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 COP00_09770 4a74744d89ed0e881e92f984e49409ef 158 PRINTS PR00502 NUDIX hydrolase family signature 62 77 6.8E-7 T 13-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 COP00_09770 4a74744d89ed0e881e92f984e49409ef 158 TIGRFAM TIGR02705 nudix_YtkD: nucleoside triphosphatase YtkD 3 156 1.6E-67 T 13-10-2018 IPR014078 Nucleoside triphosphatase YtkD MetaCyc: PWY-6502 COP00_09770 4a74744d89ed0e881e92f984e49409ef 158 Gene3D G3DSA:3.90.79.10 1 158 1.2E-48 T 13-10-2018 COP00_08280 f481bd53d19fc7cdb0746ad82b680d03 517 PIRSF PIRSF038958 1 517 8.0E-191 T 13-10-2018 IPR024923 Peptidoglycan biosynthesis protein, SpoVB-type COP00_08280 f481bd53d19fc7cdb0746ad82b680d03 517 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 360 500 7.0E-18 T 13-10-2018 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain COP00_08280 f481bd53d19fc7cdb0746ad82b680d03 517 TIGRFAM TIGR02900 spore_V_B: stage V sporulation protein B 6 494 2.6E-186 T 13-10-2018 IPR014249 Sporulation stage V protein B COP00_08280 f481bd53d19fc7cdb0746ad82b680d03 517 Pfam PF01943 Polysaccharide biosynthesis protein 6 306 1.3E-62 T 13-10-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 COP00_01075 b30030b278a9d7d8816cc9e66736135f 571 Gene3D G3DSA:3.40.970.40 243 289 8.3E-18 T 13-10-2018 COP00_01075 b30030b278a9d7d8816cc9e66736135f 571 Gene3D G3DSA:1.10.8.50 168 237 8.5E-23 T 13-10-2018 COP00_01075 b30030b278a9d7d8816cc9e66736135f 571 Pfam PF05670 Domain of unknown function (DUF814) 455 538 8.9E-29 T 13-10-2018 IPR008532 Domain of unknown function DUF814 COP00_01075 b30030b278a9d7d8816cc9e66736135f 571 Pfam PF05833 Fibronectin-binding protein A N-terminus (FbpA) 4 445 1.7E-167 T 13-10-2018 COP00_01075 b30030b278a9d7d8816cc9e66736135f 571 Gene3D G3DSA:2.30.310.10 1 167 4.2E-67 T 13-10-2018 COP00_10735 22e727c1e6871b4c5dec5218687557ad 162 SUPERFAMILY SSF50814 2 161 4.78E-75 T 13-10-2018 IPR012674 Calycin COP00_10735 22e727c1e6871b4c5dec5218687557ad 162 PIRSF PIRSF011561 1 162 2.4E-95 T 13-10-2018 IPR008729 Phenolic acid decarboxylase GO:0016831 COP00_10735 22e727c1e6871b4c5dec5218687557ad 162 Pfam PF05870 Phenolic acid decarboxylase (PAD) 2 158 2.0E-81 T 13-10-2018 IPR008729 Phenolic acid decarboxylase GO:0016831 COP00_10735 22e727c1e6871b4c5dec5218687557ad 162 ProDom PD022010 DECARBOXYLASE ACID PHENOLIC P-COUMARIC LYASE 4.1.1.- PAD PADC FERULATE PROBABLE 1 160 1.0E-85 T 13-10-2018 IPR008729 Phenolic acid decarboxylase GO:0016831 COP00_10735 22e727c1e6871b4c5dec5218687557ad 162 Gene3D G3DSA:2.40.128.20 1 161 1.3E-81 T 13-10-2018 IPR012674 Calycin COP00_19960 48f5fabf4a865960b3bda1a608320b86 254 SUPERFAMILY SSF51735 1 219 6.07E-51 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily COP00_19960 48f5fabf4a865960b3bda1a608320b86 254 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 187 0.0045 T 13-10-2018 COP00_19960 48f5fabf4a865960b3bda1a608320b86 254 Pfam PF00106 short chain dehydrogenase 6 192 4.6E-48 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_19960 48f5fabf4a865960b3bda1a608320b86 254 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 COP00_19960 48f5fabf4a865960b3bda1a608320b86 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 2.7E-19 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_19960 48f5fabf4a865960b3bda1a608320b86 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 2.7E-19 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_19960 48f5fabf4a865960b3bda1a608320b86 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 2.7E-19 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_19960 48f5fabf4a865960b3bda1a608320b86 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 77 88 2.7E-19 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_19960 48f5fabf4a865960b3bda1a608320b86 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 2.7E-19 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_19960 48f5fabf4a865960b3bda1a608320b86 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 2.7E-8 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_19960 48f5fabf4a865960b3bda1a608320b86 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 77 88 2.7E-8 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_19960 48f5fabf4a865960b3bda1a608320b86 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 2.7E-8 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_19960 48f5fabf4a865960b3bda1a608320b86 254 Gene3D G3DSA:3.40.50.720 1 253 3.9E-54 T 13-10-2018 COP00_01655 65641fe5623ef01aa84831ef42075a7b 554 Pfam PF00753 Metallo-beta-lactamase superfamily 19 166 5.8E-9 T 13-10-2018 IPR001279 Metallo-beta-lactamase COP00_01655 65641fe5623ef01aa84831ef42075a7b 554 Gene3D G3DSA:3.60.15.10 11 441 2.7E-165 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like COP00_01655 65641fe5623ef01aa84831ef42075a7b 554 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 361 406 1.0E-9 T 13-10-2018 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain COP00_01655 65641fe5623ef01aa84831ef42075a7b 554 SMART SM00849 20 214 1.4E-13 T 13-10-2018 IPR001279 Metallo-beta-lactamase COP00_01655 65641fe5623ef01aa84831ef42075a7b 554 SUPERFAMILY SSF56281 8 423 1.7E-78 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like COP00_01655 65641fe5623ef01aa84831ef42075a7b 554 Gene3D G3DSA:3.40.50.10710 207 357 2.7E-165 T 13-10-2018 COP00_01655 65641fe5623ef01aa84831ef42075a7b 554 Gene3D G3DSA:3.10.20.580 448 554 3.2E-38 T 13-10-2018 COP00_01655 65641fe5623ef01aa84831ef42075a7b 554 PIRSF PIRSF004803 1 554 7.7E-225 T 13-10-2018 IPR030854 Ribonuclease J, bacteria GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0090501 COP00_01655 65641fe5623ef01aa84831ef42075a7b 554 Hamap MF_01491 Ribonuclease J [rnj]. 3 554 45.215 T 13-10-2018 IPR030854 Ribonuclease J, bacteria GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0090501 COP00_01655 65641fe5623ef01aa84831ef42075a7b 554 TIGRFAM TIGR00649 MG423: beta-CASP ribonuclease, RNase J family 8 552 5.0E-216 T 13-10-2018 IPR004613 Ribonuclease J GO:0003723|GO:0046872 COP00_10330 46a2b7dc3aac564832d0902c8fd414c3 129 PRINTS PR00681 Ribosomal protein S1 signature 60 78 1.6E-11 T 13-10-2018 COP00_10330 46a2b7dc3aac564832d0902c8fd414c3 129 PRINTS PR00681 Ribosomal protein S1 signature 21 40 1.6E-11 T 13-10-2018 COP00_10330 46a2b7dc3aac564832d0902c8fd414c3 129 Gene3D G3DSA:2.40.50.140 2 88 1.5E-32 T 13-10-2018 COP00_10330 46a2b7dc3aac564832d0902c8fd414c3 129 SMART SM00316 6 77 1.9E-26 T 13-10-2018 IPR022967 RNA-binding domain, S1 COP00_10330 46a2b7dc3aac564832d0902c8fd414c3 129 Pfam PF00575 S1 RNA binding domain 4 77 2.0E-21 T 13-10-2018 IPR003029 S1 domain GO:0003676 COP00_10330 46a2b7dc3aac564832d0902c8fd414c3 129 SUPERFAMILY SSF50249 5 87 3.57E-24 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold COP00_03130 7fcabc89ab2ce76cb52d7343cee40d04 444 ProSitePatterns PS00180 Glutamine synthetase signature 1. 52 70 - T 13-10-2018 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 COP00_03130 7fcabc89ab2ce76cb52d7343cee40d04 444 Gene3D G3DSA:3.30.590.10 108 444 2.0E-149 T 13-10-2018 COP00_03130 7fcabc89ab2ce76cb52d7343cee40d04 444 Gene3D G3DSA:3.10.20.70 2 107 4.4E-47 T 13-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 COP00_03130 7fcabc89ab2ce76cb52d7343cee40d04 444 SUPERFAMILY SSF54368 5 104 3.27E-36 T 13-10-2018 IPR036651 Glutamine synthetase, N-terminal domain superfamily GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 COP00_03130 7fcabc89ab2ce76cb52d7343cee40d04 444 SMART SM01230 105 354 1.0E-139 T 13-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 COP00_03130 7fcabc89ab2ce76cb52d7343cee40d04 444 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 8 441 1.3E-189 T 13-10-2018 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 COP00_03130 7fcabc89ab2ce76cb52d7343cee40d04 444 SUPERFAMILY SSF55931 105 442 2.26E-129 T 13-10-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 COP00_03130 7fcabc89ab2ce76cb52d7343cee40d04 444 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 234 249 - T 13-10-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 COP00_03130 7fcabc89ab2ce76cb52d7343cee40d04 444 Pfam PF00120 Glutamine synthetase, catalytic domain 106 440 3.6E-141 T 13-10-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 COP00_03130 7fcabc89ab2ce76cb52d7343cee40d04 444 ProSitePatterns PS00182 Glutamine synthetase class-I adenylation site. 361 373 - T 13-10-2018 IPR001637 Glutamine synthetase class-I, adenylation site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 COP00_03130 7fcabc89ab2ce76cb52d7343cee40d04 444 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 17 99 4.6E-34 T 13-10-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 COP00_22265 a9241d655cdb27a9065b420670ffe76f 513 Gene3D G3DSA:3.40.50.12780 1 410 7.1E-132 T 13-10-2018 COP00_22265 a9241d655cdb27a9065b420670ffe76f 513 Pfam PF00501 AMP-binding enzyme 7 417 2.2E-119 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 COP00_22265 a9241d655cdb27a9065b420670ffe76f 513 SUPERFAMILY SSF56801 3 512 6.41E-169 T 13-10-2018 COP00_22265 a9241d655cdb27a9065b420670ffe76f 513 Pfam PF13193 AMP-binding enzyme C-terminal domain 426 500 1.6E-23 T 13-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain COP00_22265 a9241d655cdb27a9065b420670ffe76f 513 Gene3D G3DSA:3.30.300.310 413 513 1.4E-36 T 13-10-2018 COP00_22265 a9241d655cdb27a9065b420670ffe76f 513 ProSitePatterns PS00455 Putative AMP-binding domain signature. 172 183 - T 13-10-2018 IPR020845 AMP-binding, conserved site COP00_21135 114d510470475197cf529d05e5093e2b 89 Pfam PF14043 WVELL protein 4 74 1.8E-32 T 13-10-2018 IPR026952 WVELL protein COP00_11905 df98159f9d5ca2b46a33c0b537e0a8e6 94 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 9 49 1.3E-10 T 13-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 COP00_11905 df98159f9d5ca2b46a33c0b537e0a8e6 94 SMART SM00966 8 51 7.4E-9 T 13-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 COP00_11905 df98159f9d5ca2b46a33c0b537e0a8e6 94 TIGRFAM TIGR01439 lp_hng_hel_AbrB: transcriptional regulator, AbrB family 8 48 7.4E-8 T 13-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 COP00_11905 df98159f9d5ca2b46a33c0b537e0a8e6 94 SUPERFAMILY SSF89447 2 49 5.49E-14 T 13-10-2018 IPR037914 SpoVT-AbrB domain superfamily COP00_11905 df98159f9d5ca2b46a33c0b537e0a8e6 94 Gene3D G3DSA:2.10.260.10 1 54 5.0E-22 T 13-10-2018 COP00_22095 8405dbc370f6fb7b5cf6704a5d2cf57d 983 SUPERFAMILY SSF52540 4 960 3.58E-12 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_22095 8405dbc370f6fb7b5cf6704a5d2cf57d 983 Gene3D G3DSA:3.40.50.300 770 979 1.9E-15 T 13-10-2018 COP00_22095 8405dbc370f6fb7b5cf6704a5d2cf57d 983 Gene3D G3DSA:3.40.50.300 2 256 1.5E-15 T 13-10-2018 COP00_22095 8405dbc370f6fb7b5cf6704a5d2cf57d 983 Pfam PF13514 AAA domain 3 203 9.5E-26 T 13-10-2018 IPR038734 Uncharacterized protein YhaN, AAA domain COP00_14805 18e3f1b287a3271f95a733bbc63dda89 257 Pfam PF00005 ABC transporter 23 171 1.6E-35 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 COP00_14805 18e3f1b287a3271f95a733bbc63dda89 257 SMART SM00382 32 219 4.8E-13 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_14805 18e3f1b287a3271f95a733bbc63dda89 257 SUPERFAMILY SSF52540 4 224 1.69E-66 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_14805 18e3f1b287a3271f95a733bbc63dda89 257 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 COP00_14805 18e3f1b287a3271f95a733bbc63dda89 257 Gene3D G3DSA:3.40.50.300 2 248 2.4E-67 T 13-10-2018 COP00_05565 09b8cc7ed500f4115df6cebfaed7e221 290 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 10 217 1.1E-65 T 13-10-2018 IPR003740 Uncharacterised membrane protein YitT COP00_05565 09b8cc7ed500f4115df6cebfaed7e221 290 Gene3D G3DSA:3.30.70.120 193 269 4.7E-27 T 13-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal COP00_05565 09b8cc7ed500f4115df6cebfaed7e221 290 PIRSF PIRSF006483 1 284 1.3E-97 T 13-10-2018 IPR003740 Uncharacterised membrane protein YitT COP00_05565 09b8cc7ed500f4115df6cebfaed7e221 290 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 222 276 5.6E-23 T 13-10-2018 IPR019264 Domain of unknown function DUF2179 COP00_24205 d35abec43e217c7e9f34c369d592eab2 146 PIRSF PIRSF006113 14 140 4.0E-18 T 13-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 COP00_24205 d35abec43e217c7e9f34c369d592eab2 146 TIGRFAM TIGR03367 queuosine_QueD: queuosine biosynthesis protein QueD 16 110 1.1E-26 T 13-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 COP00_24205 d35abec43e217c7e9f34c369d592eab2 146 SUPERFAMILY SSF55620 12 139 6.67E-29 T 13-10-2018 COP00_24205 d35abec43e217c7e9f34c369d592eab2 146 Gene3D G3DSA:3.30.479.10 4 140 3.0E-27 T 13-10-2018 IPR038418 6-pyruvoyl tetrahydropterin synthase/QueD superfamily Reactome: R-HSA-1474151 COP00_24205 d35abec43e217c7e9f34c369d592eab2 146 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 17 138 1.0E-26 T 13-10-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family Reactome: R-HSA-1474151 COP00_20720 3363f23e0c1af12876963c75c1e1af58 562 SUPERFAMILY SSF51445 6 475 6.71E-157 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily COP00_20720 3363f23e0c1af12876963c75c1e1af58 562 Gene3D G3DSA:3.20.20.80 175 479 2.6E-133 T 13-10-2018 COP00_20720 3363f23e0c1af12876963c75c1e1af58 562 SUPERFAMILY SSF51011 479 558 1.28E-15 T 13-10-2018 COP00_20720 3363f23e0c1af12876963c75c1e1af58 562 SMART SM00642 16 418 2.4E-160 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 COP00_20720 3363f23e0c1af12876963c75c1e1af58 562 Gene3D G3DSA:3.20.20.80 2 112 3.3E-50 T 13-10-2018 COP00_20720 3363f23e0c1af12876963c75c1e1af58 562 Gene3D G3DSA:2.60.40.1180 480 562 1.8E-22 T 13-10-2018 IPR013780 Glycosyl hydrolase, all-beta COP00_20720 3363f23e0c1af12876963c75c1e1af58 562 Pfam PF00128 Alpha amylase, catalytic domain 31 376 5.1E-130 T 13-10-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 COP00_20720 3363f23e0c1af12876963c75c1e1af58 562 Gene3D G3DSA:3.90.400.10 113 174 1.0E-28 T 13-10-2018 COP00_20720 3363f23e0c1af12876963c75c1e1af58 562 TIGRFAM TIGR02403 trehalose_treC: alpha,alpha-phosphotrehalase 8 557 2.2E-268 T 13-10-2018 IPR012769 Trehalose-6-phosphate hydrolase GO:0005737|GO:0005993|GO:0008788 KEGG: 00500+3.2.1.93 COP00_20720 3363f23e0c1af12876963c75c1e1af58 562 Pfam PF16657 Maltogenic Amylase, C-terminal domain 479 551 4.6E-8 T 13-10-2018 IPR032091 Maltogenic Amylase, C-terminal COP00_15240 d637dc4498c3636f774642490bb2c293 186 SUPERFAMILY SSF53850 14 166 2.5E-7 T 13-10-2018 COP00_14255 92b9be6a71fb7a6799c08942d6c0e4c7 806 PRINTS PR00723 Subtilisin serine protease family (S8) signature 229 242 3.3E-21 T 13-10-2018 IPR015500 Peptidase S8, subtilisin-related COP00_14255 92b9be6a71fb7a6799c08942d6c0e4c7 806 PRINTS PR00723 Subtilisin serine protease family (S8) signature 531 547 3.3E-21 T 13-10-2018 IPR015500 Peptidase S8, subtilisin-related COP00_14255 92b9be6a71fb7a6799c08942d6c0e4c7 806 PRINTS PR00723 Subtilisin serine protease family (S8) signature 180 199 3.3E-21 T 13-10-2018 IPR015500 Peptidase S8, subtilisin-related COP00_14255 92b9be6a71fb7a6799c08942d6c0e4c7 806 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 233 243 - T 13-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site COP00_14255 92b9be6a71fb7a6799c08942d6c0e4c7 806 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 532 542 - T 13-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site COP00_14255 92b9be6a71fb7a6799c08942d6c0e4c7 806 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 185 196 - T 13-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site COP00_14255 92b9be6a71fb7a6799c08942d6c0e4c7 806 Gene3D G3DSA:2.60.40.4070 718 799 3.5E-6 T 13-10-2018 COP00_14255 92b9be6a71fb7a6799c08942d6c0e4c7 806 SUPERFAMILY SSF52025 378 469 8.63E-15 T 13-10-2018 COP00_14255 92b9be6a71fb7a6799c08942d6c0e4c7 806 Pfam PF05922 Peptidase inhibitor I9 57 141 1.8E-10 T 13-10-2018 IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 Reactome: R-HSA-381426|Reactome: R-HSA-8866427|Reactome: R-HSA-8957275|Reactome: R-HSA-8964038 COP00_14255 92b9be6a71fb7a6799c08942d6c0e4c7 806 Pfam PF02225 PA domain 383 461 1.6E-13 T 13-10-2018 IPR003137 PA domain COP00_14255 92b9be6a71fb7a6799c08942d6c0e4c7 806 Pfam PF13860 FlgD Ig-like domain 722 790 1.7E-6 T 13-10-2018 IPR025965 FlgD Ig-like domain COP00_14255 92b9be6a71fb7a6799c08942d6c0e4c7 806 Gene3D G3DSA:3.30.70.80 50 141 5.0E-5 T 13-10-2018 IPR037045 Peptidase S8 propeptide/proteinase inhibitor I9 superfamily Reactome: R-HSA-381426|Reactome: R-HSA-8866427|Reactome: R-HSA-8957275|Reactome: R-HSA-8964038 COP00_14255 92b9be6a71fb7a6799c08942d6c0e4c7 806 Pfam PF00082 Subtilase family 180 586 1.3E-80 T 13-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 COP00_14255 92b9be6a71fb7a6799c08942d6c0e4c7 806 Gene3D G3DSA:3.50.30.30 357 475 1.5E-29 T 13-10-2018 COP00_14255 92b9be6a71fb7a6799c08942d6c0e4c7 806 SUPERFAMILY SSF52743 161 596 1.27E-90 T 13-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 COP00_18745 744bf3d37eae9bd8c0349ace3977c070 244 SUPERFAMILY SSF160467 10 111 1.22E-16 T 13-10-2018 COP00_18745 744bf3d37eae9bd8c0349ace3977c070 244 SUPERFAMILY SSF50891 106 236 2.54E-49 T 13-10-2018 IPR029000 Cyclophilin-like domain superfamily COP00_18745 744bf3d37eae9bd8c0349ace3977c070 244 Pfam PF02682 Carboxyltransferase domain, subdomain C and D 8 220 8.8E-81 T 13-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D COP00_18745 744bf3d37eae9bd8c0349ace3977c070 244 TIGRFAM TIGR00370 TIGR00370: sensor histidine kinase inhibitor, KipI family 12 229 5.9E-88 T 13-10-2018 IPR010016 KipI family KEGG: 00480+3.5.2.9|MetaCyc: PWY-4041|MetaCyc: PWY-7942 COP00_18745 744bf3d37eae9bd8c0349ace3977c070 244 Gene3D G3DSA:2.40.100.10 104 243 3.1E-62 T 13-10-2018 IPR029000 Cyclophilin-like domain superfamily COP00_18745 744bf3d37eae9bd8c0349ace3977c070 244 SMART SM00796 7 220 3.7E-105 T 13-10-2018 IPR003833 Carboxyltransferase domain, subdomain C and D COP00_18745 744bf3d37eae9bd8c0349ace3977c070 244 Gene3D G3DSA:3.30.1360.40 4 103 7.0E-30 T 13-10-2018 COP00_02095 409c61444ef86e3457a99ee7a9b88281 73 SUPERFAMILY SSF50182 5 63 2.45E-24 T 13-10-2018 IPR010920 LSM domain superfamily COP00_02095 409c61444ef86e3457a99ee7a9b88281 73 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 5 64 2.9E-32 T 13-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 COP00_02095 409c61444ef86e3457a99ee7a9b88281 73 Gene3D G3DSA:2.30.30.100 1 73 1.4E-35 T 13-10-2018 COP00_02095 409c61444ef86e3457a99ee7a9b88281 73 Pfam PF17209 Hfq protein 6 68 1.9E-33 T 13-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 COP00_02095 409c61444ef86e3457a99ee7a9b88281 73 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 2 64 29.99 T 13-10-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 COP00_21920 f9aa45e3e656179b6ab34a31808bd5b8 171 Pfam PF00583 Acetyltransferase (GNAT) family 42 137 1.6E-14 T 13-10-2018 IPR000182 GNAT domain COP00_21920 f9aa45e3e656179b6ab34a31808bd5b8 171 Gene3D G3DSA:3.40.630.30 2 166 5.4E-46 T 13-10-2018 COP00_21920 f9aa45e3e656179b6ab34a31808bd5b8 171 SUPERFAMILY SSF55729 11 163 6.38E-29 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase COP00_06750 cdc79b6aebe0cc4ce60d034ecac85ec9 111 SMART SM00530 5 61 2.5E-16 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 COP00_06750 cdc79b6aebe0cc4ce60d034ecac85ec9 111 Pfam PF01381 Helix-turn-helix 6 58 3.1E-17 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 COP00_06750 cdc79b6aebe0cc4ce60d034ecac85ec9 111 Pfam PF08671 Anti-repressor SinI 74 101 2.3E-13 T 13-10-2018 IPR010981 SinR repressor/SinI anti-repressor, dimerisation domain GO:0006355|GO:0046983 COP00_06750 cdc79b6aebe0cc4ce60d034ecac85ec9 111 SUPERFAMILY SSF47413 2 65 2.25E-18 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 COP00_06750 cdc79b6aebe0cc4ce60d034ecac85ec9 111 Gene3D G3DSA:1.10.260.40 1 111 7.8E-34 T 13-10-2018 COP00_06750 cdc79b6aebe0cc4ce60d034ecac85ec9 111 SUPERFAMILY SSF47406 74 107 3.92E-13 T 13-10-2018 IPR036281 SinR repressor/SinI anti-repressor, dimerisation domain superfamily GO:0006355|GO:0046983 COP00_20960 d8a568db01d4264e76652e7eb4840a84 278 SUPERFAMILY SSF63520 172 273 1.05E-26 T 13-10-2018 IPR036634 PRD domain superfamily GO:0006355 COP00_20960 d8a568db01d4264e76652e7eb4840a84 278 Pfam PF03123 CAT RNA binding domain 1 54 1.5E-20 T 13-10-2018 IPR004341 CAT RNA-binding domain GO:0003723 COP00_20960 d8a568db01d4264e76652e7eb4840a84 278 SUPERFAMILY SSF50151 1 52 8.11E-17 T 13-10-2018 IPR036650 CAT RNA-binding domain superfamily GO:0003723 COP00_20960 d8a568db01d4264e76652e7eb4840a84 278 Gene3D G3DSA:1.10.1790.10 64 166 5.6E-33 T 13-10-2018 COP00_20960 d8a568db01d4264e76652e7eb4840a84 278 ProSitePatterns PS00654 PRD domain signature. 97 109 - T 13-10-2018 IPR001550 Transcription antiterminator, conserved site GO:0003723|GO:0045893 COP00_20960 d8a568db01d4264e76652e7eb4840a84 278 SMART SM01061 1 58 5.8E-26 T 13-10-2018 IPR004341 CAT RNA-binding domain GO:0003723 COP00_20960 d8a568db01d4264e76652e7eb4840a84 278 Gene3D G3DSA:2.30.24.10 1 55 5.6E-24 T 13-10-2018 IPR036650 CAT RNA-binding domain superfamily GO:0003723 COP00_20960 d8a568db01d4264e76652e7eb4840a84 278 SUPERFAMILY SSF63520 54 165 4.05E-31 T 13-10-2018 IPR036634 PRD domain superfamily GO:0006355 COP00_20960 d8a568db01d4264e76652e7eb4840a84 278 Pfam PF00874 PRD domain 181 272 2.6E-23 T 13-10-2018 IPR011608 PRD domain GO:0006355 COP00_20960 d8a568db01d4264e76652e7eb4840a84 278 Pfam PF00874 PRD domain 74 161 2.6E-25 T 13-10-2018 IPR011608 PRD domain GO:0006355 COP00_20960 d8a568db01d4264e76652e7eb4840a84 278 Gene3D G3DSA:1.10.1790.10 168 276 1.2E-27 T 13-10-2018 COP00_01165 7c9f15e169ce8cbcfc8aa309cf71ce2f 62 SUPERFAMILY SSF143800 1 61 1.65E-22 T 13-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_01165 7c9f15e169ce8cbcfc8aa309cf71ce2f 62 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 56 8.8E-22 T 13-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 COP00_01165 7c9f15e169ce8cbcfc8aa309cf71ce2f 62 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 62 19.246 T 13-10-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 COP00_01165 7c9f15e169ce8cbcfc8aa309cf71ce2f 62 Gene3D G3DSA:2.30.170.40 19 62 1.2E-17 T 13-10-2018 IPR037147 Ribosomal protein L28/L24 superfamily GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_01165 7c9f15e169ce8cbcfc8aa309cf71ce2f 62 Pfam PF00830 Ribosomal L28 family 3 58 1.7E-19 T 13-10-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_22920 5665ac3efec2e584e9379643bd954256 221 SUPERFAMILY SSF53955 99 220 1.27E-48 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily COP00_22920 5665ac3efec2e584e9379643bd954256 221 Gene3D G3DSA:1.10.530.10 59 221 1.4E-52 T 13-10-2018 COP00_22920 5665ac3efec2e584e9379643bd954256 221 Pfam PF01464 Transglycosylase SLT domain 103 211 1.4E-33 T 13-10-2018 IPR008258 Transglycosylase SLT domain 1 COP00_06660 babcebc27dc5e79471cab3299b8fcb5b 307 SUPERFAMILY SSF52540 43 260 7.78E-22 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_06660 babcebc27dc5e79471cab3299b8fcb5b 307 Gene3D G3DSA:3.40.50.300 117 292 2.3E-23 T 13-10-2018 COP00_06660 babcebc27dc5e79471cab3299b8fcb5b 307 SMART SM00382 135 282 7.3E-8 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_06660 babcebc27dc5e79471cab3299b8fcb5b 307 TIGRFAM TIGR02858 spore_III_AA: stage III sporulation protein AA 28 291 4.6E-119 T 13-10-2018 IPR014217 Sporulation stage III, protein AA COP00_05230 4f6631631563abe9533046fa5c15d04d 261 Pfam PF04445 Putative SAM-dependent methyltransferase 41 228 2.6E-18 T 13-10-2018 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 COP00_05230 4f6631631563abe9533046fa5c15d04d 261 Gene3D G3DSA:3.40.50.150 66 251 4.9E-41 T 13-10-2018 COP00_05230 4f6631631563abe9533046fa5c15d04d 261 SUPERFAMILY SSF53335 2 255 8.06E-52 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase COP00_12345 571d57e1f461dac96bf27487d64b8c62 1766 SUPERFAMILY SSF53955 1541 1634 2.39E-9 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily COP00_12345 571d57e1f461dac96bf27487d64b8c62 1766 Gene3D G3DSA:1.10.530.10 1540 1652 2.6E-5 T 13-10-2018 COP00_12345 571d57e1f461dac96bf27487d64b8c62 1766 Pfam PF10145 Phage-related minor tail protein 323 586 3.3E-51 T 13-10-2018 IPR010090 Phage tail tape measure protein COP00_12345 571d57e1f461dac96bf27487d64b8c62 1766 Pfam PF01464 Transglycosylase SLT domain 1551 1658 5.0E-9 T 13-10-2018 IPR008258 Transglycosylase SLT domain 1 COP00_12345 571d57e1f461dac96bf27487d64b8c62 1766 TIGRFAM TIGR01760 tape_meas_TP901: phage tail tape measure protein, TP901 family, core region 534 691 3.9E-17 T 13-10-2018 IPR010090 Phage tail tape measure protein COP00_12345 571d57e1f461dac96bf27487d64b8c62 1766 TIGRFAM TIGR01760 tape_meas_TP901: phage tail tape measure protein, TP901 family, core region 281 496 1.1E-41 T 13-10-2018 IPR010090 Phage tail tape measure protein COP00_12345 571d57e1f461dac96bf27487d64b8c62 1766 SUPERFAMILY SSF48371 771 1323 8.96E-15 T 13-10-2018 IPR016024 Armadillo-type fold COP00_12850 36551e61e4dbe16780757a57607f2061 252 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 2 252 5.1E-121 T 13-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 COP00_12850 36551e61e4dbe16780757a57607f2061 252 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 1 252 48.639 T 13-10-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 COP00_12850 36551e61e4dbe16780757a57607f2061 252 Gene3D G3DSA:3.20.20.70 1 252 3.0E-105 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 COP00_12850 36551e61e4dbe16780757a57607f2061 252 Pfam PF00977 Histidine biosynthesis protein 5 235 1.3E-87 T 13-10-2018 IPR006062 Histidine biosynthesis GO:0000105 COP00_12850 36551e61e4dbe16780757a57607f2061 252 SUPERFAMILY SSF51366 3 252 1.49E-81 T 13-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 COP00_05645 2f2482b780cf2326068d1078c8263d59 342 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 5 331 2.3E-125 T 13-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 COP00_05645 2f2482b780cf2326068d1078c8263d59 342 SUPERFAMILY SSF52418 71 333 6.15E-87 T 13-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 COP00_05645 2f2482b780cf2326068d1078c8263d59 342 SUPERFAMILY SSF47648 1 67 1.11E-15 T 13-10-2018 IPR036320 Glycosyl transferase family 3, N-terminal domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 COP00_05645 2f2482b780cf2326068d1078c8263d59 342 Gene3D G3DSA:1.20.970.10 1 68 4.6E-19 T 13-10-2018 COP00_05645 2f2482b780cf2326068d1078c8263d59 342 Gene3D G3DSA:3.40.1030.10 69 340 8.7E-98 T 13-10-2018 IPR035902 Nucleoside phosphorylase/phosphoribosyltransferase catalytic domain superfamily Reactome: R-HSA-73614|Reactome: R-HSA-73621 COP00_05645 2f2482b780cf2326068d1078c8263d59 342 Pfam PF02885 Glycosyl transferase family, helical bundle domain 3 64 3.4E-15 T 13-10-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 COP00_05645 2f2482b780cf2326068d1078c8263d59 342 Pfam PF00591 Glycosyl transferase family, a/b domain 71 323 2.8E-96 T 13-10-2018 IPR000312 Glycosyl transferase, family 3 GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 COP00_05645 2f2482b780cf2326068d1078c8263d59 342 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 3 332 37.78 T 13-10-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 COP00_20390 9df4d8a294a18db893889add332b4c93 488 SUPERFAMILY SSF51445 5 484 2.52E-160 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily COP00_20390 9df4d8a294a18db893889add332b4c93 488 Pfam PF00232 Glycosyl hydrolase family 1 5 484 2.8E-132 T 13-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 COP00_20390 9df4d8a294a18db893889add332b4c93 488 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 11 25 - T 13-10-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site COP00_20390 9df4d8a294a18db893889add332b4c93 488 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 382 390 - T 13-10-2018 IPR018120 Glycoside hydrolase family 1, active site COP00_20390 9df4d8a294a18db893889add332b4c93 488 Gene3D G3DSA:3.20.20.80 1 486 2.1E-149 T 13-10-2018 COP00_20390 9df4d8a294a18db893889add332b4c93 488 PRINTS PR00131 Glycosyl hydrolase family 1 signature 449 461 1.1E-13 T 13-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 COP00_20390 9df4d8a294a18db893889add332b4c93 488 PRINTS PR00131 Glycosyl hydrolase family 1 signature 424 441 1.1E-13 T 13-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 COP00_20390 9df4d8a294a18db893889add332b4c93 488 PRINTS PR00131 Glycosyl hydrolase family 1 signature 317 331 1.1E-13 T 13-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 COP00_20390 9df4d8a294a18db893889add332b4c93 488 PRINTS PR00131 Glycosyl hydrolase family 1 signature 403 414 1.1E-13 T 13-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 COP00_20390 9df4d8a294a18db893889add332b4c93 488 PRINTS PR00131 Glycosyl hydrolase family 1 signature 382 390 1.1E-13 T 13-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 COP00_20280 95958eba12a767e3967e46af4323f918 738 Gene3D G3DSA:1.10.10.160 116 190 1.7E-110 T 13-10-2018 IPR013986 DExx box DNA helicase domain superfamily COP00_20280 95958eba12a767e3967e46af4323f918 738 TIGRFAM TIGR01073 pcrA: ATP-dependent DNA helicase PcrA 8 736 0.0 T 13-10-2018 IPR005751 ATP-dependent DNA helicase PcrA GO:0004003|GO:0005737|GO:0006268 COP00_20280 95958eba12a767e3967e46af4323f918 738 Pfam PF13361 UvrD-like helicase C-terminal domain 280 620 2.4E-76 T 13-10-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 COP00_20280 95958eba12a767e3967e46af4323f918 738 Gene3D G3DSA:1.10.486.10 386 552 2.0E-135 T 13-10-2018 COP00_20280 95958eba12a767e3967e46af4323f918 738 Gene3D G3DSA:3.40.50.300 283 639 2.0E-135 T 13-10-2018 COP00_20280 95958eba12a767e3967e46af4323f918 738 Pfam PF00580 UvrD/REP helicase N-terminal domain 12 275 7.4E-84 T 13-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 COP00_20280 95958eba12a767e3967e46af4323f918 738 SUPERFAMILY SSF52540 3 648 4.08E-189 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_20280 95958eba12a767e3967e46af4323f918 738 Gene3D G3DSA:3.40.50.300 12 277 1.7E-110 T 13-10-2018 COP00_12840 d3afed4a608d170655eb0e27a9341da5 486 Gene3D G3DSA:1.25.40.10 10 137 1.9E-12 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 COP00_12840 d3afed4a608d170655eb0e27a9341da5 486 Pfam PF14559 Tetratricopeptide repeat 163 220 3.3E-6 T 13-10-2018 COP00_12840 d3afed4a608d170655eb0e27a9341da5 486 SUPERFAMILY SSF48452 22 322 6.24E-18 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 COP00_12840 d3afed4a608d170655eb0e27a9341da5 486 Gene3D G3DSA:1.25.40.10 155 322 3.5E-18 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 COP00_12840 d3afed4a608d170655eb0e27a9341da5 486 SMART SM00028 90 123 29.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 COP00_12840 d3afed4a608d170655eb0e27a9341da5 486 SMART SM00028 187 220 0.61 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 COP00_12840 d3afed4a608d170655eb0e27a9341da5 486 SMART SM00028 21 54 2.3 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 COP00_04450 11a0635cec46cc0e89191f73685e5d94 171 Pfam PF08020 Protein of unknown function (DUF1706) 5 167 1.7E-51 T 13-10-2018 IPR012550 Protein of unknown function DUF1706 COP00_04450 11a0635cec46cc0e89191f73685e5d94 171 PIRSF PIRSF031551 2 171 3.3E-53 T 13-10-2018 IPR012550 Protein of unknown function DUF1706 COP00_04450 11a0635cec46cc0e89191f73685e5d94 171 Gene3D G3DSA:1.20.120.450 1 170 6.0E-67 T 13-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes COP00_15335 c29150e293fb7c51119a68b9ca020aa3 270 Gene3D G3DSA:3.30.1240.10 86 192 8.3E-93 T 13-10-2018 COP00_15335 c29150e293fb7c51119a68b9ca020aa3 270 Pfam PF08282 haloacid dehalogenase-like hydrolase 5 263 6.8E-71 T 13-10-2018 COP00_15335 c29150e293fb7c51119a68b9ca020aa3 270 ProSitePatterns PS01229 Hypothetical cof family signature 2. 217 239 - T 13-10-2018 COP00_15335 c29150e293fb7c51119a68b9ca020aa3 270 SUPERFAMILY SSF56784 1 268 7.77E-78 T 13-10-2018 IPR036412 HAD-like superfamily COP00_15335 c29150e293fb7c51119a68b9ca020aa3 270 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 4 263 2.1E-69 T 13-10-2018 IPR000150 Cof family GO:0016787 COP00_15335 c29150e293fb7c51119a68b9ca020aa3 270 ProSitePatterns PS01228 Hypothetical cof family signature 1. 4 15 - T 13-10-2018 COP00_15335 c29150e293fb7c51119a68b9ca020aa3 270 Gene3D G3DSA:3.40.50.1000 3 263 8.3E-93 T 13-10-2018 IPR023214 HAD superfamily COP00_15335 c29150e293fb7c51119a68b9ca020aa3 270 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 4 236 2.0E-28 T 13-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 COP00_15435 7716cf992c49ea61c579b07ced40857a 418 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 202 404 3.0E-26 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 COP00_15435 7716cf992c49ea61c579b07ced40857a 418 SUPERFAMILY SSF160964 71 170 2.62E-7 T 13-10-2018 COP00_15435 7716cf992c49ea61c579b07ced40857a 418 SUPERFAMILY SSF161098 167 402 3.01E-55 T 13-10-2018 IPR035906 MetI-like superfamily COP00_15435 7716cf992c49ea61c579b07ced40857a 418 Gene3D G3DSA:1.10.3720.10 163 416 4.5E-66 T 13-10-2018 IPR035906 MetI-like superfamily COP00_23405 0f92fa2bbbff3056bd249e9e4c093ba7 124 Gene3D G3DSA:3.30.40.60 20 123 3.4E-6 T 13-10-2018 COP00_23405 0f92fa2bbbff3056bd249e9e4c093ba7 124 Pfam PF01844 HNH endonuclease 62 109 1.5E-10 T 13-10-2018 IPR002711 HNH endonuclease GO:0003676|GO:0004519 COP00_23405 0f92fa2bbbff3056bd249e9e4c093ba7 124 SMART SM00507 50 105 9.5E-8 T 13-10-2018 IPR003615 HNH nuclease COP00_12400 9acdef681a4b119c613cabbaf5b50521 593 Gene3D G3DSA:3.40.50.300 85 292 1.2E-26 T 13-10-2018 COP00_12400 9acdef681a4b119c613cabbaf5b50521 593 Pfam PF03354 Phage Terminase 111 568 6.6E-80 T 13-10-2018 IPR005021 Terminase large subunit, Lambdalikevirus-type COP00_24510 9acdef681a4b119c613cabbaf5b50521 593 Gene3D G3DSA:3.40.50.300 85 292 1.2E-26 T 13-10-2018 COP00_24510 9acdef681a4b119c613cabbaf5b50521 593 Pfam PF03354 Phage Terminase 111 568 6.6E-80 T 13-10-2018 IPR005021 Terminase large subunit, Lambdalikevirus-type COP00_02905 ba4194aa7cc085251092825c7c82c952 571 SMART SM00486 4 377 0.0076 T 13-10-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 COP00_02905 ba4194aa7cc085251092825c7c82c952 571 Gene3D G3DSA:3.90.1600.10 256 455 2.9E-13 T 13-10-2018 IPR023211 DNA polymerase, palm domain superfamily KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 COP00_02905 ba4194aa7cc085251092825c7c82c952 571 SUPERFAMILY SSF56672 226 562 1.95E-43 T 13-10-2018 COP00_17885 46c38a6d9b98f89ea9ba09a533789fc6 606 Pfam PF08439 Oligopeptidase F 118 187 6.8E-17 T 13-10-2018 IPR013647 Oligopeptidase F, N-terminal domain COP00_17885 46c38a6d9b98f89ea9ba09a533789fc6 606 SUPERFAMILY SSF55486 9 585 2.93E-113 T 13-10-2018 COP00_17885 46c38a6d9b98f89ea9ba09a533789fc6 606 TIGRFAM TIGR00181 pepF: oligoendopeptidase F 11 601 3.0E-201 T 13-10-2018 IPR004438 Peptidase M3B, oligoendopeptidase F GO:0004222|GO:0006508 COP00_17885 46c38a6d9b98f89ea9ba09a533789fc6 606 Gene3D G3DSA:1.20.140.70 28 183 1.1E-41 T 13-10-2018 COP00_17885 46c38a6d9b98f89ea9ba09a533789fc6 606 Pfam PF01432 Peptidase family M3 210 589 5.1E-40 T 13-10-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 COP00_17885 46c38a6d9b98f89ea9ba09a533789fc6 606 Gene3D G3DSA:1.10.1370.20 233 606 3.1E-122 T 13-10-2018 COP00_03900 fc2271acb8bc3fcfdb7c9131b1d7a4b1 320 SUPERFAMILY SSF46785 4 60 2.05E-8 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_03900 fc2271acb8bc3fcfdb7c9131b1d7a4b1 320 Gene3D G3DSA:1.10.10.10 3 63 2.8E-10 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_03900 fc2271acb8bc3fcfdb7c9131b1d7a4b1 320 Pfam PF13280 WYL domain 139 314 5.5E-29 T 13-10-2018 IPR026881 WYL domain COP00_03900 fc2271acb8bc3fcfdb7c9131b1d7a4b1 320 Pfam PF08279 HTH domain 8 60 5.3E-14 T 13-10-2018 IPR013196 Helix-turn-helix, type 11 COP00_14900 e71f11711a47765b195c7b4c61d7bc69 278 PIRSF PIRSF006483 1 278 2.2E-83 T 13-10-2018 IPR003740 Uncharacterised membrane protein YitT COP00_14900 e71f11711a47765b195c7b4c61d7bc69 278 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 7 210 5.2E-63 T 13-10-2018 IPR003740 Uncharacterised membrane protein YitT COP00_14900 e71f11711a47765b195c7b4c61d7bc69 278 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 216 270 7.5E-22 T 13-10-2018 IPR019264 Domain of unknown function DUF2179 COP00_14900 e71f11711a47765b195c7b4c61d7bc69 278 Gene3D G3DSA:3.30.70.120 188 263 1.9E-23 T 13-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal COP00_20145 a9818e717c9af910f1e36d584ad1c9ec 320 PIRSF PIRSF002849 2 315 1.3E-131 T 13-10-2018 COP00_20145 a9818e717c9af910f1e36d584ad1c9ec 320 Pfam PF07726 ATPase family associated with various cellular activities (AAA) 41 171 2.7E-64 T 13-10-2018 IPR011703 ATPase, AAA-3 GO:0005524|GO:0016887 COP00_20145 a9818e717c9af910f1e36d584ad1c9ec 320 Gene3D G3DSA:1.10.8.300 202 310 2.5E-33 T 13-10-2018 COP00_20145 a9818e717c9af910f1e36d584ad1c9ec 320 SUPERFAMILY SSF52540 10 285 5.71E-44 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_20145 a9818e717c9af910f1e36d584ad1c9ec 320 Gene3D G3DSA:3.40.50.300 22 188 8.8E-45 T 13-10-2018 COP00_04380 d4d741e1a7ff95027471dd5e36844d57 238 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 186 1.9E-4 T 13-10-2018 COP00_04380 d4d741e1a7ff95027471dd5e36844d57 238 Gene3D G3DSA:3.40.50.720 1 236 3.5E-75 T 13-10-2018 COP00_04380 d4d741e1a7ff95027471dd5e36844d57 238 PIRSF PIRSF000126 1 237 2.4E-61 T 13-10-2018 COP00_04380 d4d741e1a7ff95027471dd5e36844d57 238 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 5.7E-14 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_04380 d4d741e1a7ff95027471dd5e36844d57 238 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 5.7E-14 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_04380 d4d741e1a7ff95027471dd5e36844d57 238 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 5.7E-14 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_04380 d4d741e1a7ff95027471dd5e36844d57 238 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 COP00_04380 d4d741e1a7ff95027471dd5e36844d57 238 Pfam PF00106 short chain dehydrogenase 7 196 1.4E-63 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_04380 d4d741e1a7ff95027471dd5e36844d57 238 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 1.7E-32 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_04380 d4d741e1a7ff95027471dd5e36844d57 238 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 1.7E-32 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_04380 d4d741e1a7ff95027471dd5e36844d57 238 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 1.7E-32 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_04380 d4d741e1a7ff95027471dd5e36844d57 238 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 1.7E-32 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_04380 d4d741e1a7ff95027471dd5e36844d57 238 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 1.7E-32 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_04380 d4d741e1a7ff95027471dd5e36844d57 238 SUPERFAMILY SSF51735 1 220 1.23E-72 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily COP00_23875 6aa02d048f095eb226825cc47bb661cd 332 Gene3D G3DSA:3.40.50.300 3 330 2.5E-103 T 13-10-2018 COP00_23875 6aa02d048f095eb226825cc47bb661cd 332 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 COP00_23875 6aa02d048f095eb226825cc47bb661cd 332 SMART SM00382 34 234 9.8E-16 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_23875 6aa02d048f095eb226825cc47bb661cd 332 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 237 300 1.1E-18 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 COP00_23875 6aa02d048f095eb226825cc47bb661cd 332 SUPERFAMILY SSF52540 34 311 6.1E-72 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_23875 6aa02d048f095eb226825cc47bb661cd 332 Pfam PF00005 ABC transporter 26 184 5.6E-30 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 COP00_23875 6aa02d048f095eb226825cc47bb661cd 332 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 234 320 1.1E-25 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 COP00_00920 0e94256439e54af476bc77cdca5166e9 265 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 COP00_00920 0e94256439e54af476bc77cdca5166e9 265 Gene3D G3DSA:3.40.50.300 1 252 1.2E-58 T 13-10-2018 COP00_00920 0e94256439e54af476bc77cdca5166e9 265 Pfam PF00005 ABC transporter 18 169 4.4E-26 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 COP00_00920 0e94256439e54af476bc77cdca5166e9 265 SUPERFAMILY SSF52540 3 231 6.46E-48 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_00920 0e94256439e54af476bc77cdca5166e9 265 SMART SM00382 27 220 7.3E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_11470 350435bc9d3b2a8ad9ceb0ad141b3536 97 Pfam PF02583 Metal-sensitive transcriptional repressor 13 93 2.2E-33 T 13-10-2018 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 COP00_11470 350435bc9d3b2a8ad9ceb0ad141b3536 97 Gene3D G3DSA:1.20.58.1000 1 96 5.2E-39 T 13-10-2018 IPR038390 Metal-sensitive transcriptional repressor superfamily COP00_03965 5ca7b3974721110573dcf31634f2837e 295 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 3 162 1.4E-42 T 13-10-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0050661 COP00_03965 5ca7b3974721110573dcf31634f2837e 295 SUPERFAMILY SSF48179 167 288 2.61E-33 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 COP00_03965 5ca7b3974721110573dcf31634f2837e 295 SUPERFAMILY SSF51735 2 163 7.73E-40 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily COP00_03965 5ca7b3974721110573dcf31634f2837e 295 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 167 285 2.5E-30 T 13-10-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 COP00_03965 5ca7b3974721110573dcf31634f2837e 295 Gene3D G3DSA:3.40.50.720 1 163 9.1E-50 T 13-10-2018 COP00_03965 5ca7b3974721110573dcf31634f2837e 295 PIRSF PIRSF000103 1 293 1.5E-70 T 13-10-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 COP00_03965 5ca7b3974721110573dcf31634f2837e 295 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 6 19 - T 13-10-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 COP00_03965 5ca7b3974721110573dcf31634f2837e 295 Gene3D G3DSA:1.10.1040.10 166 293 4.1E-39 T 13-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 COP00_14780 1e8ae9b949cfd6e232125ac78cc7cb92 329 TIGRFAM TIGR00519 asnASE_I: L-asparaginase, type I 1 327 4.8E-132 T 13-10-2018 IPR006033 L-asparaginase, type I GO:0004067|GO:0006520 Reactome: R-HSA-70614 COP00_14780 1e8ae9b949cfd6e232125ac78cc7cb92 329 Pfam PF00710 Asparaginase, N-terminal 3 186 1.4E-63 T 13-10-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 COP00_14780 1e8ae9b949cfd6e232125ac78cc7cb92 329 Gene3D G3DSA:3.40.50.1170 1 199 5.5E-70 T 13-10-2018 IPR037152 L-asparaginase, N-terminal domain superfamily Reactome: R-HSA-70614 COP00_14780 1e8ae9b949cfd6e232125ac78cc7cb92 329 PRINTS PR00139 Asparaginase/glutaminase family signature 77 95 1.2E-15 T 13-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 COP00_14780 1e8ae9b949cfd6e232125ac78cc7cb92 329 PRINTS PR00139 Asparaginase/glutaminase family signature 253 271 1.2E-15 T 13-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 COP00_14780 1e8ae9b949cfd6e232125ac78cc7cb92 329 PRINTS PR00139 Asparaginase/glutaminase family signature 4 15 1.2E-15 T 13-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 COP00_14780 1e8ae9b949cfd6e232125ac78cc7cb92 329 Gene3D G3DSA:3.40.50.40 200 329 4.2E-37 T 13-10-2018 IPR027473 L-asparaginase, C-terminal Reactome: R-HSA-70614 COP00_14780 1e8ae9b949cfd6e232125ac78cc7cb92 329 SUPERFAMILY SSF53774 1 327 2.22E-98 T 13-10-2018 IPR036152 Asparaginase/glutaminase-like superfamily Reactome: R-HSA-70614 COP00_14780 1e8ae9b949cfd6e232125ac78cc7cb92 329 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 6 14 - T 13-10-2018 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 COP00_14780 1e8ae9b949cfd6e232125ac78cc7cb92 329 PIRSF PIRSF001220 1 327 1.4E-99 T 13-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 COP00_14780 1e8ae9b949cfd6e232125ac78cc7cb92 329 SMART SM00870 3 316 4.8E-116 T 13-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 COP00_14780 1e8ae9b949cfd6e232125ac78cc7cb92 329 PIRSF PIRSF500176 1 325 1.7E-107 T 13-10-2018 COP00_14780 1e8ae9b949cfd6e232125ac78cc7cb92 329 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 78 88 - T 13-10-2018 IPR027475 Asparaginase/glutaminase, active site 2 Reactome: R-HSA-70614 COP00_12380 66c543b8a62664075d104489be148511 165 Gene3D G3DSA:2.60.40.10 1 69 3.5E-16 T 13-10-2018 IPR013783 Immunoglobulin-like fold COP00_12380 66c543b8a62664075d104489be148511 165 Gene3D G3DSA:2.60.40.1080 76 157 7.0E-21 T 13-10-2018 COP00_12380 66c543b8a62664075d104489be148511 165 SMART SM00635 76 152 6.2E-17 T 13-10-2018 IPR003343 Bacterial Ig-like, group 2 COP00_12380 66c543b8a62664075d104489be148511 165 SUPERFAMILY SSF49265 1 84 7.05E-11 T 13-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 COP00_12380 66c543b8a62664075d104489be148511 165 Pfam PF02368 Bacterial Ig-like domain (group 2) 79 150 8.7E-17 T 13-10-2018 IPR003343 Bacterial Ig-like, group 2 COP00_12380 66c543b8a62664075d104489be148511 165 SUPERFAMILY SSF49373 77 156 1.29E-17 T 13-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments COP00_00015 66c543b8a62664075d104489be148511 165 Gene3D G3DSA:2.60.40.10 1 69 3.5E-16 T 13-10-2018 IPR013783 Immunoglobulin-like fold COP00_00015 66c543b8a62664075d104489be148511 165 Gene3D G3DSA:2.60.40.1080 76 157 7.0E-21 T 13-10-2018 COP00_00015 66c543b8a62664075d104489be148511 165 SMART SM00635 76 152 6.2E-17 T 13-10-2018 IPR003343 Bacterial Ig-like, group 2 COP00_00015 66c543b8a62664075d104489be148511 165 SUPERFAMILY SSF49265 1 84 7.05E-11 T 13-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 COP00_00015 66c543b8a62664075d104489be148511 165 Pfam PF02368 Bacterial Ig-like domain (group 2) 79 150 8.7E-17 T 13-10-2018 IPR003343 Bacterial Ig-like, group 2 COP00_00015 66c543b8a62664075d104489be148511 165 SUPERFAMILY SSF49373 77 156 1.29E-17 T 13-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments COP00_24530 66c543b8a62664075d104489be148511 165 Gene3D G3DSA:2.60.40.10 1 69 3.5E-16 T 13-10-2018 IPR013783 Immunoglobulin-like fold COP00_24530 66c543b8a62664075d104489be148511 165 Gene3D G3DSA:2.60.40.1080 76 157 7.0E-21 T 13-10-2018 COP00_24530 66c543b8a62664075d104489be148511 165 SMART SM00635 76 152 6.2E-17 T 13-10-2018 IPR003343 Bacterial Ig-like, group 2 COP00_24530 66c543b8a62664075d104489be148511 165 SUPERFAMILY SSF49265 1 84 7.05E-11 T 13-10-2018 IPR036116 Fibronectin type III superfamily GO:0005515 COP00_24530 66c543b8a62664075d104489be148511 165 Pfam PF02368 Bacterial Ig-like domain (group 2) 79 150 8.7E-17 T 13-10-2018 IPR003343 Bacterial Ig-like, group 2 COP00_24530 66c543b8a62664075d104489be148511 165 SUPERFAMILY SSF49373 77 156 1.29E-17 T 13-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments COP00_20820 e47f2a16f0779ecf026743657ea4a19f 1420 SUPERFAMILY SSF55816 371 607 3.4E-47 T 13-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 COP00_20820 e47f2a16f0779ecf026743657ea4a19f 1420 SUPERFAMILY SSF56300 659 969 1.04E-76 T 13-10-2018 COP00_20820 e47f2a16f0779ecf026743657ea4a19f 1420 Gene3D G3DSA:3.90.780.10 419 606 2.2E-61 T 13-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 COP00_20820 e47f2a16f0779ecf026743657ea4a19f 1420 Pfam PF02872 5'-nucleotidase, C-terminal domain 973 1136 5.6E-49 T 13-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 COP00_20820 e47f2a16f0779ecf026743657ea4a19f 1420 Pfam PF02872 5'-nucleotidase, C-terminal domain 371 569 2.0E-25 T 13-10-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 COP00_20820 e47f2a16f0779ecf026743657ea4a19f 1420 ProSitePatterns PS00786 5'-nucleotidase signature 2. 130 141 - T 13-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 COP00_20820 e47f2a16f0779ecf026743657ea4a19f 1420 TIGRFAM TIGR01167 LPXTG_anchor: LPXTG cell wall anchor domain 1384 1416 8.8E-4 T 13-10-2018 COP00_20820 e47f2a16f0779ecf026743657ea4a19f 1420 Gene3D G3DSA:3.90.780.10 973 1173 2.2E-73 T 13-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 COP00_20820 e47f2a16f0779ecf026743657ea4a19f 1420 Pfam PF00149 Calcineurin-like phosphoesterase 42 280 5.4E-15 T 13-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 COP00_20820 e47f2a16f0779ecf026743657ea4a19f 1420 Pfam PF00149 Calcineurin-like phosphoesterase 665 894 1.5E-14 T 13-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 COP00_20820 e47f2a16f0779ecf026743657ea4a19f 1420 Gene3D G3DSA:3.60.21.10 31 370 1.2E-134 T 13-10-2018 IPR029052 Metallo-dependent phosphatase-like COP00_20820 e47f2a16f0779ecf026743657ea4a19f 1420 PRINTS PR01607 Apyrase family signature 877 900 9.7E-41 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 COP00_20820 e47f2a16f0779ecf026743657ea4a19f 1420 PRINTS PR01607 Apyrase family signature 1031 1054 9.7E-41 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 COP00_20820 e47f2a16f0779ecf026743657ea4a19f 1420 PRINTS PR01607 Apyrase family signature 1109 1128 9.7E-41 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 COP00_20820 e47f2a16f0779ecf026743657ea4a19f 1420 PRINTS PR01607 Apyrase family signature 663 681 9.7E-41 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 COP00_20820 e47f2a16f0779ecf026743657ea4a19f 1420 PRINTS PR01607 Apyrase family signature 908 928 9.7E-41 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 COP00_20820 e47f2a16f0779ecf026743657ea4a19f 1420 PRINTS PR01607 Apyrase family signature 858 875 9.7E-41 T 13-10-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 COP00_20820 e47f2a16f0779ecf026743657ea4a19f 1420 SUPERFAMILY SSF55816 972 1170 1.02E-62 T 13-10-2018 IPR036907 5'-Nucleotidase, C-terminal domain superfamily GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 COP00_20820 e47f2a16f0779ecf026743657ea4a19f 1420 Gene3D G3DSA:3.60.21.10 663 972 7.4E-89 T 13-10-2018 IPR029052 Metallo-dependent phosphatase-like COP00_20820 e47f2a16f0779ecf026743657ea4a19f 1420 ProSitePatterns PS00785 5'-nucleotidase signature 1. 665 677 - T 13-10-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 COP00_20820 e47f2a16f0779ecf026743657ea4a19f 1420 SUPERFAMILY SSF56300 36 369 3.28E-81 T 13-10-2018 COP00_20455 69e47c4637fc53453968a8b18d16395f 301 SUPERFAMILY SSF103481 190 291 1.23E-13 T 13-10-2018 COP00_20455 69e47c4637fc53453968a8b18d16395f 301 Pfam PF00892 EamA-like transporter family 154 290 1.0E-20 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 COP00_20455 69e47c4637fc53453968a8b18d16395f 301 Pfam PF00892 EamA-like transporter family 6 140 2.8E-21 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 COP00_20455 69e47c4637fc53453968a8b18d16395f 301 SUPERFAMILY SSF103481 41 143 2.09E-13 T 13-10-2018 COP00_00765 d53fb916eea387d64ae2a4d8dd4a8e9a 406 TIGRFAM TIGR02871 spore_ylbJ: sporulation integral membrane protein YlbJ 9 390 1.8E-132 T 13-10-2018 IPR014226 Sporulation integral membrane protein YlbJ COP00_00765 d53fb916eea387d64ae2a4d8dd4a8e9a 406 Pfam PF07670 Nucleoside recognition 44 140 9.8E-7 T 13-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 COP00_21035 ec2b009e7eff3f4598fb0212ee64a6b8 532 SUPERFAMILY SSF75005 24 298 1.21E-81 T 13-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily COP00_21035 ec2b009e7eff3f4598fb0212ee64a6b8 532 SUPERFAMILY SSF49899 327 523 7.12E-40 T 13-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily COP00_21035 ec2b009e7eff3f4598fb0212ee64a6b8 532 Gene3D G3DSA:2.60.120.200 325 521 2.5E-54 T 13-10-2018 COP00_21035 ec2b009e7eff3f4598fb0212ee64a6b8 532 Pfam PF04616 Glycosyl hydrolases family 43 24 293 3.3E-65 T 13-10-2018 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 COP00_21035 ec2b009e7eff3f4598fb0212ee64a6b8 532 Gene3D G3DSA:2.115.10.20 20 304 1.6E-77 T 13-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily COP00_14725 59f10cf6bf514ef76652637e6f3f8533 405 Pfam PF04235 Protein of unknown function (DUF418) 233 387 3.0E-45 T 13-10-2018 IPR007349 Domain of unknown function DUF418 COP00_00720 23c6503e2d6c6a6a0a9288117feb93f7 148 SMART SM00116 11 60 5.2E-5 T 13-10-2018 IPR000644 CBS domain COP00_00720 23c6503e2d6c6a6a0a9288117feb93f7 148 SMART SM00116 77 124 9.4E-9 T 13-10-2018 IPR000644 CBS domain COP00_00720 23c6503e2d6c6a6a0a9288117feb93f7 148 SUPERFAMILY SSF54631 3 121 1.16E-31 T 13-10-2018 COP00_00720 23c6503e2d6c6a6a0a9288117feb93f7 148 Gene3D G3DSA:3.10.580.10 1 143 2.5E-36 T 13-10-2018 COP00_00720 23c6503e2d6c6a6a0a9288117feb93f7 148 Pfam PF00571 CBS domain 4 56 3.2E-12 T 13-10-2018 IPR000644 CBS domain COP00_00720 23c6503e2d6c6a6a0a9288117feb93f7 148 Pfam PF00571 CBS domain 70 119 2.7E-13 T 13-10-2018 IPR000644 CBS domain COP00_24290 12f12de3d2ee8b9e89f3e671a975bacc 82 SUPERFAMILY SSF47413 12 73 2.25E-12 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 COP00_24290 12f12de3d2ee8b9e89f3e671a975bacc 82 Pfam PF01381 Helix-turn-helix 21 68 1.0E-11 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 COP00_24290 12f12de3d2ee8b9e89f3e671a975bacc 82 Gene3D G3DSA:1.10.260.40 11 73 1.4E-11 T 13-10-2018 COP00_24290 12f12de3d2ee8b9e89f3e671a975bacc 82 SMART SM00530 13 69 7.1E-11 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 COP00_03000 1fa62c07f6d2ef2234f78a7e6e7f6cf7 327 ProSitePatterns PS00095 C-5 cytosine-specific DNA methylases C-terminal signature. 292 310 - T 13-10-2018 IPR031303 DNA methylase, C-5 cytosine-specific, conserved site KEGG: 00270+2.1.1.37 COP00_03000 1fa62c07f6d2ef2234f78a7e6e7f6cf7 327 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 3 19 5.3E-12 T 13-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 COP00_03000 1fa62c07f6d2ef2234f78a7e6e7f6cf7 327 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 107 121 5.3E-12 T 13-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 COP00_03000 1fa62c07f6d2ef2234f78a7e6e7f6cf7 327 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 153 166 5.3E-12 T 13-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 COP00_03000 1fa62c07f6d2ef2234f78a7e6e7f6cf7 327 Gene3D G3DSA:3.90.120.10 180 266 1.9E-58 T 13-10-2018 COP00_03000 1fa62c07f6d2ef2234f78a7e6e7f6cf7 327 Pfam PF00145 C-5 cytosine-specific DNA methylase 2 311 3.2E-50 T 13-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 COP00_03000 1fa62c07f6d2ef2234f78a7e6e7f6cf7 327 TIGRFAM TIGR00675 dcm: DNA (cytosine-5-)-methyltransferase 5 216 1.0E-39 T 13-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 COP00_03000 1fa62c07f6d2ef2234f78a7e6e7f6cf7 327 ProSitePatterns PS00094 C-5 cytosine-specific DNA methylases active site. 62 74 - T 13-10-2018 IPR018117 DNA methylase, C-5 cytosine-specific, active site KEGG: 00270+2.1.1.37|Reactome: R-HSA-212300|Reactome: R-HSA-4655427|Reactome: R-HSA-5334118 COP00_03000 1fa62c07f6d2ef2234f78a7e6e7f6cf7 327 SUPERFAMILY SSF53335 2 311 9.14E-61 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase COP00_03000 1fa62c07f6d2ef2234f78a7e6e7f6cf7 327 Gene3D G3DSA:3.40.50.150 3 304 1.9E-58 T 13-10-2018 COP00_06615 5e7d63b95b0422f06c2fc0deb86685dc 450 SUPERFAMILY SSF56059 83 349 1.94E-72 T 13-10-2018 COP00_06615 5e7d63b95b0422f06c2fc0deb86685dc 450 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 449 1.7E-246 T 13-10-2018 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 COP00_06615 5e7d63b95b0422f06c2fc0deb86685dc 450 SMART SM00878 337 443 3.5E-70 T 13-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 COP00_06615 5e7d63b95b0422f06c2fc0deb86685dc 450 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 6.3E-48 T 13-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 COP00_06615 5e7d63b95b0422f06c2fc0deb86685dc 450 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 153 167 - T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 COP00_06615 5e7d63b95b0422f06c2fc0deb86685dc 450 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 116 323 7.2E-84 T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 COP00_06615 5e7d63b95b0422f06c2fc0deb86685dc 450 SUPERFAMILY SSF52440 1 113 4.1E-51 T 13-10-2018 IPR016185 Pre-ATP-grasp domain superfamily COP00_06615 5e7d63b95b0422f06c2fc0deb86685dc 450 Gene3D G3DSA:3.30.470.130 1 448 1.1E-201 T 13-10-2018 COP00_06615 5e7d63b95b0422f06c2fc0deb86685dc 450 Pfam PF02785 Biotin carboxylase C-terminal domain 337 443 3.9E-43 T 13-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 COP00_06615 5e7d63b95b0422f06c2fc0deb86685dc 450 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 287 294 - T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 COP00_06615 5e7d63b95b0422f06c2fc0deb86685dc 450 SUPERFAMILY SSF51246 332 443 1.67E-46 T 13-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 COP00_04015 2c4b16e2df9a3f08276164283627994f 386 Pfam PF02702 Osmosensitive K+ channel His kinase sensor domain 26 235 2.8E-94 T 13-10-2018 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal GO:0000155|GO:0000160|GO:0004673|GO:0016020 COP00_04015 2c4b16e2df9a3f08276164283627994f 386 SUPERFAMILY SSF52402 256 381 1.84E-13 T 13-10-2018 COP00_04015 2c4b16e2df9a3f08276164283627994f 386 Gene3D G3DSA:3.40.50.300 24 234 5.1E-93 T 13-10-2018 COP00_04015 2c4b16e2df9a3f08276164283627994f 386 SUPERFAMILY SSF52540 17 130 5.32E-7 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_04015 2c4b16e2df9a3f08276164283627994f 386 Pfam PF00582 Universal stress protein family 255 374 1.1E-6 T 13-10-2018 IPR006016 UspA COP00_04015 2c4b16e2df9a3f08276164283627994f 386 Gene3D G3DSA:3.40.50.620 238 381 3.0E-10 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold COP00_01275 e11c58ba4008b5ab89f9ca0aa2d4cffe 283 Pfam PF01926 50S ribosome-binding GTPase 123 213 6.1E-17 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 COP00_01275 e11c58ba4008b5ab89f9ca0aa2d4cffe 283 Gene3D G3DSA:1.10.1580.10 180 272 2.3E-29 T 13-10-2018 IPR023179 GTP-binding protein, orthogonal bundle domain superfamily COP00_01275 e11c58ba4008b5ab89f9ca0aa2d4cffe 283 PIRSF PIRSF006230 1 283 2.0E-105 T 13-10-2018 IPR016478 GTPase, MTG1 COP00_01275 e11c58ba4008b5ab89f9ca0aa2d4cffe 283 SUPERFAMILY SSF52540 9 252 2.79E-50 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_01275 e11c58ba4008b5ab89f9ca0aa2d4cffe 283 TIGRFAM TIGR03596 GTPase_YlqF: ribosome biogenesis GTP-binding protein YlqF 3 278 2.5E-116 T 13-10-2018 IPR019991 GTP-binding protein, ribosome biogenesis COP00_01275 e11c58ba4008b5ab89f9ca0aa2d4cffe 283 Gene3D G3DSA:3.40.50.300 12 179 1.5E-51 T 13-10-2018 COP00_11480 d81b7eefd6262e6cd081e00d69fad0b1 253 SUPERFAMILY SSF46785 5 64 1.3E-13 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_11480 d81b7eefd6262e6cd081e00d69fad0b1 253 SUPERFAMILY SSF100950 74 234 1.15E-34 T 13-10-2018 IPR037171 NagB/RpiA transferase-like COP00_11480 d81b7eefd6262e6cd081e00d69fad0b1 253 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 1.1E-10 T 13-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 COP00_11480 d81b7eefd6262e6cd081e00d69fad0b1 253 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 1.1E-10 T 13-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 COP00_11480 d81b7eefd6262e6cd081e00d69fad0b1 253 Pfam PF00455 DeoR C terminal sensor domain 75 232 1.6E-51 T 13-10-2018 IPR014036 DeoR C-terminal sensor domain COP00_11480 d81b7eefd6262e6cd081e00d69fad0b1 253 SMART SM00420 6 58 4.5E-25 T 13-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 COP00_11480 d81b7eefd6262e6cd081e00d69fad0b1 253 SMART SM01134 73 233 1.7E-64 T 13-10-2018 COP00_11480 d81b7eefd6262e6cd081e00d69fad0b1 253 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 13-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 COP00_11480 d81b7eefd6262e6cd081e00d69fad0b1 253 Pfam PF08220 DeoR-like helix-turn-helix domain 6 61 2.2E-19 T 13-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 COP00_11480 d81b7eefd6262e6cd081e00d69fad0b1 253 Gene3D G3DSA:1.10.10.10 1 55 6.2E-6 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_05200 fdd327ccd78ccfd3ae378467ee3f6761 212 Pfam PF03006 Haemolysin-III related 2 197 2.1E-40 T 13-10-2018 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 COP00_05200 fdd327ccd78ccfd3ae378467ee3f6761 212 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 6 206 2.5E-71 T 13-10-2018 IPR005744 Hly-III GO:0016021|GO:0019835 COP00_10575 16a7b0df37b927b0d5a519ae1da0c702 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 3.8E-14 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_10575 16a7b0df37b927b0d5a519ae1da0c702 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 170 187 3.8E-14 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_10575 16a7b0df37b927b0d5a519ae1da0c702 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 121 137 3.8E-14 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_10575 16a7b0df37b927b0d5a519ae1da0c702 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 72 83 3.8E-14 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_10575 16a7b0df37b927b0d5a519ae1da0c702 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 147 166 3.8E-14 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_10575 16a7b0df37b927b0d5a519ae1da0c702 243 Gene3D G3DSA:3.40.50.720 3 242 5.3E-46 T 13-10-2018 COP00_10575 16a7b0df37b927b0d5a519ae1da0c702 243 Pfam PF00106 short chain dehydrogenase 5 192 3.8E-33 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_10575 16a7b0df37b927b0d5a519ae1da0c702 243 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 134 162 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 COP00_10575 16a7b0df37b927b0d5a519ae1da0c702 243 SUPERFAMILY SSF51735 5 230 8.44E-40 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily COP00_08925 d939775f7817065d6ba70279dcd4bec1 228 SMART SM01007 7 195 2.2E-68 T 13-10-2018 IPR001303 Class II aldolase/adducin N-terminal COP00_08925 d939775f7817065d6ba70279dcd4bec1 228 TIGRFAM TIGR00760 araD: L-ribulose-5-phosphate 4-epimerase 2 228 2.6E-124 T 13-10-2018 IPR004661 L-ribulose-5-phosphate 4-epimerase GO:0008270|GO:0008742|GO:0019572 KEGG: 00040+5.1.3.4|KEGG: 00053+5.1.3.4|MetaCyc: PWY-6961 COP00_08925 d939775f7817065d6ba70279dcd4bec1 228 SUPERFAMILY SSF53639 3 220 2.16E-68 T 13-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily COP00_08925 d939775f7817065d6ba70279dcd4bec1 228 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 8 194 1.3E-47 T 13-10-2018 IPR001303 Class II aldolase/adducin N-terminal COP00_08925 d939775f7817065d6ba70279dcd4bec1 228 Gene3D G3DSA:3.40.225.10 1 228 4.4E-59 T 13-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily COP00_09300 7f83357554d6d7f37b1297df3cf66040 566 Gene3D G3DSA:3.30.450.40 121 256 4.2E-8 T 13-10-2018 IPR029016 GAF-like domain superfamily COP00_09300 7f83357554d6d7f37b1297df3cf66040 566 Pfam PF00990 Diguanylate cyclase, GGDEF domain 412 559 9.7E-44 T 13-10-2018 IPR000160 GGDEF domain COP00_09300 7f83357554d6d7f37b1297df3cf66040 566 SMART SM00267 400 563 1.5E-59 T 13-10-2018 IPR000160 GGDEF domain COP00_09300 7f83357554d6d7f37b1297df3cf66040 566 SUPERFAMILY SSF55073 416 564 9.42E-41 T 13-10-2018 IPR029787 Nucleotide cyclase COP00_09300 7f83357554d6d7f37b1297df3cf66040 566 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 407 562 2.3E-39 T 13-10-2018 IPR000160 GGDEF domain COP00_09300 7f83357554d6d7f37b1297df3cf66040 566 SUPERFAMILY SSF55781 117 263 1.33E-5 T 13-10-2018 COP00_09300 7f83357554d6d7f37b1297df3cf66040 566 Gene3D G3DSA:3.30.70.270 406 565 1.2E-47 T 13-10-2018 COP00_09300 7f83357554d6d7f37b1297df3cf66040 566 SUPERFAMILY SSF55781 237 399 1.26E-10 T 13-10-2018 COP00_09300 7f83357554d6d7f37b1297df3cf66040 566 Gene3D G3DSA:3.30.450.40 257 405 1.7E-8 T 13-10-2018 IPR029016 GAF-like domain superfamily COP00_01980 bd8c1b0f7f05eb197cfb84fa3a3131a4 224 Pfam PF06912 Protein of unknown function (DUF1275) 11 213 9.5E-39 T 13-10-2018 IPR010699 Protein of unknown function DUF1275 COP00_16300 0fe9326d2aa8c5eeb1459fc7993ebc8f 178 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 9 51 1.1E-10 T 13-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 COP00_16300 0fe9326d2aa8c5eeb1459fc7993ebc8f 178 SMART SM00966 8 52 1.1E-10 T 13-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 COP00_16300 0fe9326d2aa8c5eeb1459fc7993ebc8f 178 Gene3D G3DSA:3.30.450.40 56 178 4.0E-48 T 13-10-2018 IPR029016 GAF-like domain superfamily COP00_16300 0fe9326d2aa8c5eeb1459fc7993ebc8f 178 Pfam PF15714 Stage V sporulation protein T C-terminal, transcription factor 54 177 6.4E-46 T 13-10-2018 IPR039472 Sporulation stage V protein T, GAF domain COP00_16300 0fe9326d2aa8c5eeb1459fc7993ebc8f 178 TIGRFAM TIGR02851 spore_V_T: stage V sporulation protein T 2 177 5.0E-90 T 13-10-2018 IPR014213 Sporulation stage V, protein T COP00_16300 0fe9326d2aa8c5eeb1459fc7993ebc8f 178 SUPERFAMILY SSF89447 1 52 9.03E-15 T 13-10-2018 IPR037914 SpoVT-AbrB domain superfamily COP00_16300 0fe9326d2aa8c5eeb1459fc7993ebc8f 178 PIRSF PIRSF026579 1 178 3.5E-96 T 13-10-2018 IPR014213 Sporulation stage V, protein T COP00_16300 0fe9326d2aa8c5eeb1459fc7993ebc8f 178 Gene3D G3DSA:2.10.260.10 1 49 3.8E-24 T 13-10-2018 COP00_16300 0fe9326d2aa8c5eeb1459fc7993ebc8f 178 TIGRFAM TIGR01439 lp_hng_hel_AbrB: transcriptional regulator, AbrB family 8 49 1.2E-15 T 13-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 COP00_06455 b8b38793fc1365f8666a6356b4d7cfa2 506 SUPERFAMILY SSF52096 265 506 8.82E-78 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily COP00_06455 b8b38793fc1365f8666a6356b4d7cfa2 506 SUPERFAMILY SSF52096 2 250 2.13E-74 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily COP00_06455 b8b38793fc1365f8666a6356b4d7cfa2 506 Gene3D G3DSA:3.90.226.10 2 251 1.4E-87 T 13-10-2018 COP00_06455 b8b38793fc1365f8666a6356b4d7cfa2 506 Gene3D G3DSA:3.90.226.10 257 506 2.7E-82 T 13-10-2018 COP00_06455 b8b38793fc1365f8666a6356b4d7cfa2 506 Pfam PF01039 Carboxyl transferase domain 29 504 4.3E-171 T 13-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 COP00_17175 355c2a29fa6fb46a69d640aef25c9551 314 SUPERFAMILY SSF56112 5 283 5.9E-29 T 13-10-2018 IPR011009 Protein kinase-like domain superfamily COP00_17175 355c2a29fa6fb46a69d640aef25c9551 314 Pfam PF01636 Phosphotransferase enzyme family 20 251 1.7E-19 T 13-10-2018 IPR002575 Aminoglycoside phosphotransferase COP00_17175 355c2a29fa6fb46a69d640aef25c9551 314 Gene3D G3DSA:1.10.510.10 115 261 1.5E-42 T 13-10-2018 COP00_17175 355c2a29fa6fb46a69d640aef25c9551 314 Gene3D G3DSA:1.20.58.840 146 308 1.5E-42 T 13-10-2018 COP00_20975 55c39db8df98559890f9f268f2174729 344 SUPERFAMILY SSF52518 4 216 1.66E-62 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold COP00_20975 55c39db8df98559890f9f268f2174729 344 Pfam PF02779 Transketolase, pyrimidine binding domain 5 192 4.3E-52 T 13-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain COP00_20975 55c39db8df98559890f9f268f2174729 344 SMART SM00861 5 192 3.8E-58 T 13-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain COP00_20975 55c39db8df98559890f9f268f2174729 344 Gene3D G3DSA:3.40.50.920 205 337 6.7E-47 T 13-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 COP00_20975 55c39db8df98559890f9f268f2174729 344 Gene3D G3DSA:3.40.50.970 3 204 2.3E-79 T 13-10-2018 COP00_20975 55c39db8df98559890f9f268f2174729 344 SUPERFAMILY SSF52922 201 336 1.44E-41 T 13-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 COP00_20975 55c39db8df98559890f9f268f2174729 344 Pfam PF02780 Transketolase, C-terminal domain 206 328 4.7E-42 T 13-10-2018 IPR033248 Transketolase, C-terminal domain COP00_03355 9595948abeba3a3f2800095bf50a4c58 280 SMART SM00644 14 168 1.8E-37 T 13-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 COP00_03355 9595948abeba3a3f2800095bf50a4c58 280 SUPERFAMILY SSF55846 3 168 6.41E-40 T 13-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 COP00_03355 9595948abeba3a3f2800095bf50a4c58 280 Gene3D G3DSA:3.40.80.10 3 190 2.5E-46 T 13-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 COP00_03355 9595948abeba3a3f2800095bf50a4c58 280 Gene3D G3DSA:1.10.101.10 206 280 1.9E-19 T 13-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 COP00_03355 9595948abeba3a3f2800095bf50a4c58 280 SUPERFAMILY SSF47090 206 275 3.4E-18 T 13-10-2018 IPR036365 PGBD-like superfamily COP00_03355 9595948abeba3a3f2800095bf50a4c58 280 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 24 153 1.2E-22 T 13-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 COP00_03355 9595948abeba3a3f2800095bf50a4c58 280 Pfam PF01471 Putative peptidoglycan binding domain 214 275 1.1E-17 T 13-10-2018 IPR002477 Peptidoglycan binding-like COP00_11445 7abd8b140566163c69da436ad41e7e3c 467 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 126 456 3.2E-109 T 13-10-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 COP00_11445 7abd8b140566163c69da436ad41e7e3c 467 Gene3D G3DSA:3.40.50.2300 2 107 1.3E-40 T 13-10-2018 COP00_11445 7abd8b140566163c69da436ad41e7e3c 467 SUPERFAMILY SSF52794 5 106 4.36E-37 T 13-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 COP00_11445 7abd8b140566163c69da436ad41e7e3c 467 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 7 88 2.0E-31 T 13-10-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202 COP00_11445 7abd8b140566163c69da436ad41e7e3c 467 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 9 97 2.0E-17 T 13-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 COP00_01030 90b9ec9f3181e60e8a2223b3f8bc6c8e 210 SUPERFAMILY SSF53271 7 204 4.85E-53 T 13-10-2018 IPR029057 Phosphoribosyltransferase-like COP00_01030 90b9ec9f3181e60e8a2223b3f8bc6c8e 210 Gene3D G3DSA:3.40.50.2020 1 210 7.7E-62 T 13-10-2018 COP00_01030 90b9ec9f3181e60e8a2223b3f8bc6c8e 210 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 210 30.149 T 13-10-2018 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 COP00_01030 90b9ec9f3181e60e8a2223b3f8bc6c8e 210 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 7 177 1.3E-50 T 13-10-2018 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 COP00_01030 90b9ec9f3181e60e8a2223b3f8bc6c8e 210 Pfam PF00156 Phosphoribosyl transferase domain 44 150 9.6E-19 T 13-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 COP00_11035 661f86a3a83c2f97a86bfe2d961c1fd2 796 SUPERFAMILY SSF51735 4 206 1.45E-41 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily COP00_11035 661f86a3a83c2f97a86bfe2d961c1fd2 796 SUPERFAMILY SSF52096 485 793 6.11E-42 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily COP00_11035 661f86a3a83c2f97a86bfe2d961c1fd2 796 SUPERFAMILY SSF48179 357 457 5.44E-18 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 COP00_11035 661f86a3a83c2f97a86bfe2d961c1fd2 796 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 208 306 1.4E-11 T 13-10-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 COP00_11035 661f86a3a83c2f97a86bfe2d961c1fd2 796 Pfam PF00378 Enoyl-CoA hydratase/isomerase 492 644 4.5E-13 T 13-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 COP00_11035 661f86a3a83c2f97a86bfe2d961c1fd2 796 SUPERFAMILY SSF48179 206 324 2.3E-21 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 COP00_11035 661f86a3a83c2f97a86bfe2d961c1fd2 796 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 7 205 2.9E-43 T 13-10-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779 COP00_11035 661f86a3a83c2f97a86bfe2d961c1fd2 796 Gene3D G3DSA:1.10.1040.10 367 435 2.5E-6 T 13-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 COP00_11035 661f86a3a83c2f97a86bfe2d961c1fd2 796 Gene3D G3DSA:3.90.226.10 487 690 7.6E-32 T 13-10-2018 COP00_11035 661f86a3a83c2f97a86bfe2d961c1fd2 796 Gene3D G3DSA:1.10.1040.10 209 330 2.8E-18 T 13-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 COP00_11035 661f86a3a83c2f97a86bfe2d961c1fd2 796 Gene3D G3DSA:3.40.50.720 1 208 3.6E-64 T 13-10-2018 COP00_16805 608809e732b4bd5a9ebf3fc55cc4543b 37 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 37 17.611 T 13-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_16805 608809e732b4bd5a9ebf3fc55cc4543b 37 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 36 - T 13-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_16805 608809e732b4bd5a9ebf3fc55cc4543b 37 Pfam PF00444 Ribosomal protein L36 1 37 3.2E-19 T 13-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_16805 608809e732b4bd5a9ebf3fc55cc4543b 37 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 37 5.8E-24 T 13-10-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_16805 608809e732b4bd5a9ebf3fc55cc4543b 37 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 10 37 2.0E-8 T 13-10-2018 COP00_16805 608809e732b4bd5a9ebf3fc55cc4543b 37 SUPERFAMILY SSF57840 1 37 6.28E-17 T 13-10-2018 IPR035977 Ribosomal protein L36 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_01620 6bf4a490ad34c3e88d1b2208e4ec4aef 409 SUPERFAMILY SSF63411 226 401 5.67E-47 T 13-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 COP00_01620 6bf4a490ad34c3e88d1b2208e4ec4aef 409 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 33 56 - T 13-10-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 COP00_01620 6bf4a490ad34c3e88d1b2208e4ec4aef 409 SUPERFAMILY SSF63411 3 204 1.73E-62 T 13-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 COP00_01620 6bf4a490ad34c3e88d1b2208e4ec4aef 409 Gene3D G3DSA:3.30.830.10 218 409 4.6E-57 T 13-10-2018 COP00_01620 6bf4a490ad34c3e88d1b2208e4ec4aef 409 Pfam PF05193 Peptidase M16 inactive domain 168 338 3.0E-39 T 13-10-2018 IPR007863 Peptidase M16, C-terminal COP00_01620 6bf4a490ad34c3e88d1b2208e4ec4aef 409 Pfam PF00675 Insulinase (Peptidase family M16) 12 159 1.6E-48 T 13-10-2018 IPR011765 Peptidase M16, N-terminal COP00_01620 6bf4a490ad34c3e88d1b2208e4ec4aef 409 Gene3D G3DSA:3.30.830.10 1 213 1.9E-80 T 13-10-2018 COP00_22235 69ba857631d14cdeaf7b8f2ad1c6fc86 333 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 6 326 1.2E-101 T 13-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 COP00_22235 69ba857631d14cdeaf7b8f2ad1c6fc86 333 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 237 326 4.6E-32 T 13-10-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 COP00_22235 69ba857631d14cdeaf7b8f2ad1c6fc86 333 Gene3D G3DSA:3.40.47.10 3 332 2.1E-113 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 COP00_22235 69ba857631d14cdeaf7b8f2ad1c6fc86 333 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 5 326 60.794 T 13-10-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 COP00_22235 69ba857631d14cdeaf7b8f2ad1c6fc86 333 SUPERFAMILY SSF53901 4 326 1.7E-64 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 COP00_22235 69ba857631d14cdeaf7b8f2ad1c6fc86 333 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 110 188 3.7E-27 T 13-10-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 COP00_23415 0dba07c8fd2fcf3230b70509869391c8 177 Pfam PF05119 Phage terminase, small subunit 50 161 3.3E-16 T 13-10-2018 IPR006448 Putative phage terminase, small subunit, P27 family COP00_23415 0dba07c8fd2fcf3230b70509869391c8 177 TIGRFAM TIGR01558 sm_term_P27: putative phage terminase, small subunit, P27 family 40 173 2.4E-30 T 13-10-2018 IPR006448 Putative phage terminase, small subunit, P27 family COP00_09290 3fc2f8850a809ddc94afc22a11126278 212 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 58 5.1E-15 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 COP00_09290 3fc2f8850a809ddc94afc22a11126278 212 SUPERFAMILY SSF48498 85 200 3.78E-7 T 13-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily COP00_09290 3fc2f8850a809ddc94afc22a11126278 212 Gene3D G3DSA:1.10.357.10 5 209 8.1E-35 T 13-10-2018 COP00_09290 3fc2f8850a809ddc94afc22a11126278 212 ProSitePatterns PS01081 TetR-type HTH domain signature. 25 56 - T 13-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site COP00_09290 3fc2f8850a809ddc94afc22a11126278 212 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 57 2.4E-6 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 COP00_09290 3fc2f8850a809ddc94afc22a11126278 212 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 2.4E-6 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 COP00_09290 3fc2f8850a809ddc94afc22a11126278 212 SUPERFAMILY SSF46689 9 77 6.67E-17 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 COP00_12410 9d5454c5dc4cda25cd63b17092e24378 112 SMART SM00507 25 81 2.9E-10 T 13-10-2018 IPR003615 HNH nuclease COP00_12410 9d5454c5dc4cda25cd63b17092e24378 112 Pfam PF01844 HNH endonuclease 38 85 3.8E-11 T 13-10-2018 IPR002711 HNH endonuclease GO:0003676|GO:0004519 COP00_08265 cb9c67891154d25e83164b7f63fe68f5 164 PIRSF PIRSF005028 1 163 5.2E-49 T 13-10-2018 IPR026278 Potassium/proton antiporter subunit KhtT COP00_08265 cb9c67891154d25e83164b7f63fe68f5 164 Pfam PF02080 TrkA-C domain 90 157 9.8E-10 T 13-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 COP00_08265 cb9c67891154d25e83164b7f63fe68f5 164 Gene3D G3DSA:3.30.70.1450 84 161 1.9E-15 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 COP00_08265 cb9c67891154d25e83164b7f63fe68f5 164 SUPERFAMILY SSF116726 84 157 3.27E-13 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 COP00_00670 6db6ad043ebed1d595be82dac44bc63b 403 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 333 357 - T 13-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 COP00_00670 6db6ad043ebed1d595be82dac44bc63b 403 Pfam PF01098 Cell cycle protein 12 375 1.1E-115 T 13-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 COP00_00670 6db6ad043ebed1d595be82dac44bc63b 403 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 10 372 2.4E-102 T 13-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 COP00_17870 66f953c4fe078727e9c9fc4d55cb537b 374 Pfam PF00710 Asparaginase, N-terminal 51 241 3.5E-58 T 13-10-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 COP00_17870 66f953c4fe078727e9c9fc4d55cb537b 374 PRINTS PR00139 Asparaginase/glutaminase family signature 310 328 9.4E-24 T 13-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 COP00_17870 66f953c4fe078727e9c9fc4d55cb537b 374 PRINTS PR00139 Asparaginase/glutaminase family signature 132 150 9.4E-24 T 13-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 COP00_17870 66f953c4fe078727e9c9fc4d55cb537b 374 PRINTS PR00139 Asparaginase/glutaminase family signature 52 63 9.4E-24 T 13-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 COP00_17870 66f953c4fe078727e9c9fc4d55cb537b 374 Gene3D G3DSA:3.40.50.1170 46 262 1.5E-86 T 13-10-2018 IPR037152 L-asparaginase, N-terminal domain superfamily Reactome: R-HSA-70614 COP00_17870 66f953c4fe078727e9c9fc4d55cb537b 374 SUPERFAMILY SSF53774 49 373 1.7E-100 T 13-10-2018 IPR036152 Asparaginase/glutaminase-like superfamily Reactome: R-HSA-70614 COP00_17870 66f953c4fe078727e9c9fc4d55cb537b 374 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 54 62 - T 13-10-2018 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 COP00_17870 66f953c4fe078727e9c9fc4d55cb537b 374 SMART SM00870 51 368 2.9E-137 T 13-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 COP00_17870 66f953c4fe078727e9c9fc4d55cb537b 374 TIGRFAM TIGR00520 asnASE_II: L-asparaginase, type II 30 374 1.6E-151 T 13-10-2018 IPR004550 L-asparaginase, type II GO:0004067|GO:0006528 COP00_17870 66f953c4fe078727e9c9fc4d55cb537b 374 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 133 143 - T 13-10-2018 IPR027475 Asparaginase/glutaminase, active site 2 Reactome: R-HSA-70614 COP00_17870 66f953c4fe078727e9c9fc4d55cb537b 374 PIRSF PIRSF500176 48 374 5.7E-77 T 13-10-2018 COP00_17870 66f953c4fe078727e9c9fc4d55cb537b 374 PIRSF PIRSF001220 46 374 4.9E-87 T 13-10-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 COP00_17870 66f953c4fe078727e9c9fc4d55cb537b 374 Gene3D G3DSA:3.40.50.40 263 374 6.1E-38 T 13-10-2018 IPR027473 L-asparaginase, C-terminal Reactome: R-HSA-70614 COP00_09045 d4ef1b183de19bef9e1ee98df3f2e05a 340 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 146 164 1.6E-38 T 13-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 COP00_09045 d4ef1b183de19bef9e1ee98df3f2e05a 340 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 109 122 1.6E-38 T 13-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 COP00_09045 d4ef1b183de19bef9e1ee98df3f2e05a 340 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 229 246 1.6E-38 T 13-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 COP00_09045 d4ef1b183de19bef9e1ee98df3f2e05a 340 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 269 284 1.6E-38 T 13-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 COP00_09045 d4ef1b183de19bef9e1ee98df3f2e05a 340 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 173 189 1.6E-38 T 13-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 COP00_09045 d4ef1b183de19bef9e1ee98df3f2e05a 340 Gene3D G3DSA:3.30.360.10 151 315 1.3E-147 T 13-10-2018 COP00_09045 d4ef1b183de19bef9e1ee98df3f2e05a 340 SMART SM00846 3 152 1.2E-82 T 13-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 COP00_09045 d4ef1b183de19bef9e1ee98df3f2e05a 340 Gene3D G3DSA:3.40.50.720 4 329 1.3E-147 T 13-10-2018 COP00_09045 d4ef1b183de19bef9e1ee98df3f2e05a 340 PIRSF PIRSF000149 1 335 1.8E-134 T 13-10-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 COP00_09045 d4ef1b183de19bef9e1ee98df3f2e05a 340 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 157 313 9.8E-64 T 13-10-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 COP00_09045 d4ef1b183de19bef9e1ee98df3f2e05a 340 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 102 3.9E-34 T 13-10-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 COP00_09045 d4ef1b183de19bef9e1ee98df3f2e05a 340 SUPERFAMILY SSF55347 152 314 3.87E-67 T 13-10-2018 COP00_09045 d4ef1b183de19bef9e1ee98df3f2e05a 340 SUPERFAMILY SSF51735 1 178 1.06E-58 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily COP00_09045 d4ef1b183de19bef9e1ee98df3f2e05a 340 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 150 157 - T 13-10-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 COP00_09045 d4ef1b183de19bef9e1ee98df3f2e05a 340 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 325 4.6E-129 T 13-10-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 COP00_03095 611a4c47ffa53cabae8a3df2cf172e8b 146 Pfam PF08719 Domain of unknown function (DUF1768) 10 139 3.7E-26 T 13-10-2018 IPR012816 NADAR COP00_03095 611a4c47ffa53cabae8a3df2cf172e8b 146 SUPERFAMILY SSF143990 7 140 3.66E-36 T 13-10-2018 IPR037238 YbiA-like superfamily COP00_03095 611a4c47ffa53cabae8a3df2cf172e8b 146 TIGRFAM TIGR02464 ribofla_fusion: conserved hypothetical protein 10 138 7.2E-22 T 13-10-2018 IPR012816 NADAR COP00_03095 611a4c47ffa53cabae8a3df2cf172e8b 146 Gene3D G3DSA:1.10.357.40 3 144 2.8E-42 T 13-10-2018 IPR037238 YbiA-like superfamily COP00_10430 4e6e9621a433d35ef324fd064c6779b3 160 Pfam PF09335 SNARE associated Golgi protein 29 155 3.7E-24 T 13-10-2018 IPR032816 SNARE associated Golgi protein COP00_22000 6f65fdf6c17f7cd5732f587a881c1204 368 SMART SM00382 29 212 3.4E-13 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_22000 6f65fdf6c17f7cd5732f587a881c1204 368 Gene3D G3DSA:2.40.50.100 240 361 2.5E-35 T 13-10-2018 COP00_22000 6f65fdf6c17f7cd5732f587a881c1204 368 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 COP00_22000 6f65fdf6c17f7cd5732f587a881c1204 368 Gene3D G3DSA:2.40.50.140 303 348 2.5E-35 T 13-10-2018 COP00_22000 6f65fdf6c17f7cd5732f587a881c1204 368 Gene3D G3DSA:3.40.50.300 1 239 3.1E-75 T 13-10-2018 COP00_22000 6f65fdf6c17f7cd5732f587a881c1204 368 SUPERFAMILY SSF50331 237 364 4.86E-30 T 13-10-2018 IPR008995 Molybdate/tungstate binding, C-terminal COP00_22000 6f65fdf6c17f7cd5732f587a881c1204 368 Pfam PF03459 TOBE domain 303 355 9.0E-7 T 13-10-2018 IPR005116 Transport-associated OB, type 1 COP00_22000 6f65fdf6c17f7cd5732f587a881c1204 368 SUPERFAMILY SSF52540 4 243 6.58E-86 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_22000 6f65fdf6c17f7cd5732f587a881c1204 368 Pfam PF00005 ABC transporter 21 162 8.6E-31 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 COP00_23325 51bc65a3ce3d133b8d71a0688eb4382a 185 Pfam PF07352 Bacteriophage Mu Gam like protein 31 185 1.3E-34 T 13-10-2018 IPR009951 Host-nuclease inhibitor protein Gam GO:0003690|GO:0042262 COP00_23325 51bc65a3ce3d133b8d71a0688eb4382a 185 PIRSF PIRSF015195 1 185 4.8E-82 T 13-10-2018 IPR009859 Protein of unknown function, Gam-like COP00_23325 51bc65a3ce3d133b8d71a0688eb4382a 185 SUPERFAMILY SSF161266 25 174 2.88E-22 T 13-10-2018 COP00_19575 51bc65a3ce3d133b8d71a0688eb4382a 185 Pfam PF07352 Bacteriophage Mu Gam like protein 31 185 1.3E-34 T 13-10-2018 IPR009951 Host-nuclease inhibitor protein Gam GO:0003690|GO:0042262 COP00_19575 51bc65a3ce3d133b8d71a0688eb4382a 185 PIRSF PIRSF015195 1 185 4.8E-82 T 13-10-2018 IPR009859 Protein of unknown function, Gam-like COP00_19575 51bc65a3ce3d133b8d71a0688eb4382a 185 SUPERFAMILY SSF161266 25 174 2.88E-22 T 13-10-2018 COP00_14185 47e633863f77fa48e182b1bacbcf590c 311 SUPERFAMILY SSF52540 3 222 2.5E-66 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_14185 47e633863f77fa48e182b1bacbcf590c 311 Pfam PF00005 ABC transporter 19 162 4.3E-32 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 COP00_14185 47e633863f77fa48e182b1bacbcf590c 311 Pfam PF13732 Domain of unknown function (DUF4162) 236 304 3.4E-8 T 13-10-2018 IPR025302 Domain of unknown function DUF4162 COP00_14185 47e633863f77fa48e182b1bacbcf590c 311 SMART SM00382 28 210 3.6E-9 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_14185 47e633863f77fa48e182b1bacbcf590c 311 Gene3D G3DSA:3.40.50.300 1 235 2.4E-69 T 13-10-2018 COP00_14185 47e633863f77fa48e182b1bacbcf590c 311 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 COP00_11015 c322f225fec69d0e03ccbe12250321f1 127 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 3 127 2.1E-59 T 13-10-2018 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 COP00_11015 c322f225fec69d0e03ccbe12250321f1 127 Gene3D G3DSA:2.40.50.100 1 124 2.3E-53 T 13-10-2018 COP00_11015 c322f225fec69d0e03ccbe12250321f1 127 Pfam PF01597 Glycine cleavage H-protein 7 126 2.4E-51 T 13-10-2018 IPR033753 Glycine cleavage system H-protein/Simiate COP00_11015 c322f225fec69d0e03ccbe12250321f1 127 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 47 76 - T 13-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 COP00_11015 c322f225fec69d0e03ccbe12250321f1 127 SUPERFAMILY SSF51230 4 126 3.14E-46 T 13-10-2018 IPR011053 Single hybrid motif COP00_11015 c322f225fec69d0e03ccbe12250321f1 127 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 4 125 40.288 T 13-10-2018 IPR002930 Glycine cleavage system H-protein GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 COP00_19500 80a5d29a5b0626ecd1100b554d0921f0 58 Pfam PF02416 mttA/Hcf106 family 4 56 2.5E-21 T 13-10-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 COP00_19500 80a5d29a5b0626ecd1100b554d0921f0 58 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 4 48 6.4E-17 T 13-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 COP00_19500 80a5d29a5b0626ecd1100b554d0921f0 58 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 56 16.042 T 13-10-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 COP00_03995 14f7bc9d7fc35841554990fa365bc06b 351 SUPERFAMILY SSF50129 17 176 1.26E-55 T 13-10-2018 IPR011032 GroES-like superfamily COP00_03995 14f7bc9d7fc35841554990fa365bc06b 351 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 33 148 1.7E-27 T 13-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 COP00_03995 14f7bc9d7fc35841554990fa365bc06b 351 Gene3D G3DSA:3.40.50.720 164 318 8.9E-137 T 13-10-2018 COP00_03995 14f7bc9d7fc35841554990fa365bc06b 351 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 67 81 - T 13-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 COP00_03995 14f7bc9d7fc35841554990fa365bc06b 351 Pfam PF00107 Zinc-binding dehydrogenase 190 312 2.1E-25 T 13-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 COP00_03995 14f7bc9d7fc35841554990fa365bc06b 351 SUPERFAMILY SSF51735 153 316 1.07E-43 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily COP00_03995 14f7bc9d7fc35841554990fa365bc06b 351 Gene3D G3DSA:3.90.180.10 18 346 8.9E-137 T 13-10-2018 COP00_03995 14f7bc9d7fc35841554990fa365bc06b 351 SMART SM00829 10 346 4.0E-8 T 13-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 COP00_01575 275d2148c1029a12df707007e178dbc2 100 Gene3D G3DSA:3.30.1330.30 1 100 8.9E-40 T 13-10-2018 IPR029064 50S ribosomal protein L30e-like COP00_01575 275d2148c1029a12df707007e178dbc2 100 Pfam PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 7 95 2.6E-18 T 13-10-2018 IPR004038 Ribosomal protein L7Ae/L30e/S12e/Gadd45 COP00_01575 275d2148c1029a12df707007e178dbc2 100 SUPERFAMILY SSF55315 5 98 5.3E-26 T 13-10-2018 IPR029064 50S ribosomal protein L30e-like COP00_21505 9314a56264dd066d700c7903b451b7e3 176 Pfam PF03358 NADPH-dependent FMN reductase 43 105 2.8E-11 T 13-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 COP00_21505 9314a56264dd066d700c7903b451b7e3 176 Gene3D G3DSA:3.40.50.360 1 173 1.6E-49 T 13-10-2018 IPR029039 Flavoprotein-like superfamily COP00_21505 9314a56264dd066d700c7903b451b7e3 176 SUPERFAMILY SSF52218 1 170 1.97E-45 T 13-10-2018 IPR029039 Flavoprotein-like superfamily COP00_07170 a7af780be24923898de92885901ee4e9 119 Gene3D G3DSA:1.10.760.10 49 119 1.7E-22 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 COP00_07170 a7af780be24923898de92885901ee4e9 119 SUPERFAMILY SSF46626 6 117 2.72E-15 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 COP00_07170 a7af780be24923898de92885901ee4e9 119 PIRSF PIRSF000025 1 119 1.7E-36 T 13-10-2018 IPR012218 Cytochrome c, Bacillus subtilis c550-related GO:0005506|GO:0009055|GO:0016021|GO:0020037 COP00_07170 a7af780be24923898de92885901ee4e9 119 Pfam PF13442 Cytochrome C oxidase, cbb3-type, subunit III 48 115 4.8E-12 T 13-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 COP00_19305 3cbaca70d1ae389035e2f464f7566732 261 Gene3D G3DSA:3.50.30.50 2 259 2.2E-50 T 13-10-2018 IPR037175 Kynurenine formamidase superfamily GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 COP00_19305 3cbaca70d1ae389035e2f464f7566732 261 Pfam PF04199 Putative cyclase 7 187 2.5E-36 T 13-10-2018 IPR007325 Kynurenine formamidase/cyclase-like GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 COP00_19305 3cbaca70d1ae389035e2f464f7566732 261 SUPERFAMILY SSF102198 3 256 2.35E-56 T 13-10-2018 IPR037175 Kynurenine formamidase superfamily GO:0004061|GO:0019441 KEGG: 00380+3.5.1.9|KEGG: 00630+3.5.1.9|MetaCyc: PWY-5651|MetaCyc: PWY-6309|MetaCyc: PWY-7717|MetaCyc: PWY-7733|MetaCyc: PWY-7734|MetaCyc: PWY-7765 COP00_14595 e1ecd3f69dfeab39cf36e6311dd13a03 196 TIGRFAM TIGR00567 3mg: DNA-3-methyladenine glycosylase 8 195 5.0E-73 T 13-10-2018 IPR003180 Methylpurine-DNA glycosylase GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 COP00_14595 e1ecd3f69dfeab39cf36e6311dd13a03 196 Pfam PF02245 Methylpurine-DNA glycosylase (MPG) 11 192 1.9E-56 T 13-10-2018 IPR003180 Methylpurine-DNA glycosylase GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 COP00_14595 e1ecd3f69dfeab39cf36e6311dd13a03 196 Hamap MF_00527 Putative 3-methyladenine DNA glycosylase. 10 195 32.424 T 13-10-2018 IPR003180 Methylpurine-DNA glycosylase GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 COP00_14595 e1ecd3f69dfeab39cf36e6311dd13a03 196 SUPERFAMILY SSF50486 6 196 3.14E-62 T 13-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 COP00_14595 e1ecd3f69dfeab39cf36e6311dd13a03 196 Gene3D G3DSA:3.10.300.10 3 196 5.6E-62 T 13-10-2018 IPR036995 Methylpurine-DNA glycosylase superfamily GO:0003677|GO:0003905|GO:0006284 Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 COP00_08300 3182331089ca152f52c0d1adad3e23d5 381 Gene3D G3DSA:3.20.20.105 2 375 1.1E-171 T 13-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 COP00_08300 3182331089ca152f52c0d1adad3e23d5 381 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 8 375 1.3E-177 T 13-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 COP00_08300 3182331089ca152f52c0d1adad3e23d5 381 SUPERFAMILY SSF51713 8 371 7.06E-163 T 13-10-2018 IPR036511 Queuine tRNA-ribosyltransferase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 COP00_08300 3182331089ca152f52c0d1adad3e23d5 381 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 6 370 58.179 T 13-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 COP00_08300 3182331089ca152f52c0d1adad3e23d5 381 Pfam PF01702 Queuine tRNA-ribosyltransferase 134 367 3.4E-92 T 13-10-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 COP00_08300 3182331089ca152f52c0d1adad3e23d5 381 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 8 375 7.2E-189 T 13-10-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 COP00_16720 0637c8605f5a8cac375230e1cc0640df 66 SUPERFAMILY SSF46561 1 63 2.09E-24 T 13-10-2018 IPR036049 Ribosomal protein L29/L35 superfamily GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 COP00_16720 0637c8605f5a8cac375230e1cc0640df 66 ProSitePatterns PS00579 Ribosomal protein L29 signature. 39 53 - T 13-10-2018 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 COP00_16720 0637c8605f5a8cac375230e1cc0640df 66 Gene3D G3DSA:1.10.287.310 1 66 2.5E-31 T 13-10-2018 COP00_16720 0637c8605f5a8cac375230e1cc0640df 66 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 60 3.6E-25 T 13-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 COP00_16720 0637c8605f5a8cac375230e1cc0640df 66 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 19.375 T 13-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 COP00_16720 0637c8605f5a8cac375230e1cc0640df 66 Pfam PF00831 Ribosomal L29 protein 4 60 3.4E-27 T 13-10-2018 IPR001854 Ribosomal protein L29/L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 COP00_00240 781d6dbe24986f9cf9264ead8c458c65 702 SUPERFAMILY SSF56601 342 695 2.41E-65 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like COP00_00240 781d6dbe24986f9cf9264ead8c458c65 702 Pfam PF00905 Penicillin binding protein transpeptidase domain 371 689 4.6E-70 T 13-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 COP00_00240 781d6dbe24986f9cf9264ead8c458c65 702 SUPERFAMILY SSF56519 61 340 6.02E-35 T 13-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 COP00_00240 781d6dbe24986f9cf9264ead8c458c65 702 Gene3D G3DSA:3.40.710.10 340 685 1.5E-200 T 13-10-2018 COP00_00240 781d6dbe24986f9cf9264ead8c458c65 702 Pfam PF03717 Penicillin-binding Protein dimerisation domain 66 325 3.5E-32 T 13-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 COP00_00240 781d6dbe24986f9cf9264ead8c458c65 702 Gene3D G3DSA:3.90.1310.30 68 588 1.5E-200 T 13-10-2018 COP00_00240 781d6dbe24986f9cf9264ead8c458c65 702 Gene3D G3DSA:1.10.10.1230 93 216 1.5E-200 T 13-10-2018 COP00_19250 bc11a847ac4ea5a81a784dd2e9e0941c 192 Gene3D G3DSA:1.10.10.60 1 55 5.6E-27 T 13-10-2018 COP00_19250 bc11a847ac4ea5a81a784dd2e9e0941c 192 SUPERFAMILY SSF48498 78 190 1.59E-25 T 13-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily COP00_19250 bc11a847ac4ea5a81a784dd2e9e0941c 192 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 38 61 6.9E-9 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 COP00_19250 bc11a847ac4ea5a81a784dd2e9e0941c 192 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 17 30 6.9E-9 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 COP00_19250 bc11a847ac4ea5a81a784dd2e9e0941c 192 SUPERFAMILY SSF46689 7 65 2.49E-15 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 COP00_19250 bc11a847ac4ea5a81a784dd2e9e0941c 192 Gene3D G3DSA:1.10.357.10 56 191 3.9E-37 T 13-10-2018 COP00_19250 bc11a847ac4ea5a81a784dd2e9e0941c 192 Pfam PF16859 Bacterial transcriptional repressor C-terminal 74 183 5.6E-30 T 13-10-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal COP00_19250 bc11a847ac4ea5a81a784dd2e9e0941c 192 Pfam PF00440 Bacterial regulatory proteins, tetR family 17 59 1.9E-14 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 COP00_15005 90317905e3ddb392ee097daee1a1367c 174 Pfam PF01947 Protein of unknown function (DUF98) 20 165 3.7E-9 T 13-10-2018 IPR002800 Chorismate pyruvate-lyase Rv2949c-like COP00_15005 90317905e3ddb392ee097daee1a1367c 174 SUPERFAMILY SSF64288 16 164 1.02E-27 T 13-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily COP00_15005 90317905e3ddb392ee097daee1a1367c 174 Gene3D G3DSA:3.40.1410.10 10 169 1.1E-30 T 13-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily COP00_07035 015abdc120a93795be5fac623cab5e83 297 Gene3D G3DSA:3.40.190.10 115 237 9.0E-90 T 13-10-2018 COP00_07035 015abdc120a93795be5fac623cab5e83 297 Pfam PF12849 PBP superfamily domain 31 267 4.6E-44 T 13-10-2018 IPR024370 PBP domain COP00_07035 015abdc120a93795be5fac623cab5e83 297 SUPERFAMILY SSF53850 41 288 2.73E-77 T 13-10-2018 COP00_07035 015abdc120a93795be5fac623cab5e83 297 Gene3D G3DSA:3.40.190.10 43 281 9.0E-90 T 13-10-2018 COP00_07035 015abdc120a93795be5fac623cab5e83 297 TIGRFAM TIGR02136 ptsS_2: phosphate binding protein 4 281 2.3E-81 T 13-10-2018 IPR011862 Phosphate binding protein GO:0042301 COP00_11690 412c8a6a3a992417ac808dddb213a394 243 SUPERFAMILY SSF52096 15 193 1.27E-48 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily COP00_11690 412c8a6a3a992417ac808dddb213a394 243 Pfam PF00574 Clp protease 53 189 6.8E-34 T 13-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA COP00_11690 412c8a6a3a992417ac808dddb213a394 243 PRINTS PR00127 Clp protease catalytic subunit P signature 56 76 6.1E-12 T 13-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 COP00_11690 412c8a6a3a992417ac808dddb213a394 243 PRINTS PR00127 Clp protease catalytic subunit P signature 165 184 6.1E-12 T 13-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 COP00_11690 412c8a6a3a992417ac808dddb213a394 243 PRINTS PR00127 Clp protease catalytic subunit P signature 106 125 6.1E-12 T 13-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 COP00_11690 412c8a6a3a992417ac808dddb213a394 243 Gene3D G3DSA:3.90.226.10 1 201 3.0E-50 T 13-10-2018 COP00_07910 c531a8bb1a4ec1d023d0eed5a5805976 137 Pfam PF11208 Protein of unknown function (DUF2992) 3 137 1.1E-44 T 13-10-2018 IPR016787 Uncharacterised conserved protein UCP021328 COP00_07910 c531a8bb1a4ec1d023d0eed5a5805976 137 PIRSF PIRSF021328 1 137 1.1E-49 T 13-10-2018 IPR016787 Uncharacterised conserved protein UCP021328 COP00_13990 b0bf380ee0779fd14882d3bbd2eb80bb 535 SUPERFAMILY SSF52540 1 270 2.32E-127 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_13990 b0bf380ee0779fd14882d3bbd2eb80bb 535 Gene3D G3DSA:3.40.50.300 1 286 2.3E-137 T 13-10-2018 COP00_13990 b0bf380ee0779fd14882d3bbd2eb80bb 535 Hamap MF_01227 CTP synthase [pyrG]. 2 532 53.41 T 13-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 COP00_13990 b0bf380ee0779fd14882d3bbd2eb80bb 535 SUPERFAMILY SSF52317 290 531 9.32E-85 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like COP00_13990 b0bf380ee0779fd14882d3bbd2eb80bb 535 Pfam PF06418 CTP synthase N-terminus 3 267 6.7E-131 T 13-10-2018 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 COP00_13990 b0bf380ee0779fd14882d3bbd2eb80bb 535 Gene3D G3DSA:3.40.50.880 288 535 1.8E-104 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like COP00_13990 b0bf380ee0779fd14882d3bbd2eb80bb 535 Pfam PF00117 Glutamine amidotransferase class-I 302 526 1.5E-59 T 13-10-2018 IPR017926 Glutamine amidotransferase COP00_13990 b0bf380ee0779fd14882d3bbd2eb80bb 535 TIGRFAM TIGR00337 PyrG: CTP synthase 1 527 6.2E-269 T 13-10-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 COP00_22630 38052c639e847143b3c60a3b4dea8194 447 SUPERFAMILY SSF51905 7 273 4.43E-18 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily COP00_22630 38052c639e847143b3c60a3b4dea8194 447 Gene3D G3DSA:3.50.50.60 1 432 9.3E-129 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily COP00_22630 38052c639e847143b3c60a3b4dea8194 447 Pfam PF13434 L-lysine 6-monooxygenase (NADPH-requiring) 10 346 1.2E-118 T 13-10-2018 IPR025700 L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase COP00_22630 38052c639e847143b3c60a3b4dea8194 447 SUPERFAMILY SSF51905 196 377 1.86E-6 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily COP00_01690 d6e0868d14c8e442b03198afcb820ecf 426 Gene3D G3DSA:3.30.830.10 7 231 1.3E-63 T 13-10-2018 COP00_01690 d6e0868d14c8e442b03198afcb820ecf 426 Pfam PF05193 Peptidase M16 inactive domain 185 356 3.3E-25 T 13-10-2018 IPR007863 Peptidase M16, C-terminal COP00_01690 d6e0868d14c8e442b03198afcb820ecf 426 Gene3D G3DSA:3.30.830.10 240 425 7.2E-42 T 13-10-2018 COP00_01690 d6e0868d14c8e442b03198afcb820ecf 426 SUPERFAMILY SSF63411 246 414 5.0E-31 T 13-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 COP00_01690 d6e0868d14c8e442b03198afcb820ecf 426 SUPERFAMILY SSF63411 13 224 2.17E-23 T 13-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 COP00_15845 38d1e3c7c012349fc4f8839f7f161434 170 Pfam PF00436 Single-strand binding protein family 2 103 1.6E-39 T 13-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 COP00_15845 38d1e3c7c012349fc4f8839f7f161434 170 Gene3D G3DSA:2.40.50.140 1 109 2.3E-47 T 13-10-2018 COP00_15845 38d1e3c7c012349fc4f8839f7f161434 170 PIRSF PIRSF002070 1 156 3.3E-42 T 13-10-2018 COP00_15845 38d1e3c7c012349fc4f8839f7f161434 170 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 1 170 1.9E-54 T 13-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 COP00_15845 38d1e3c7c012349fc4f8839f7f161434 170 Hamap MF_00984 Single-stranded DNA-binding protein. 2 107 37.757 T 13-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 COP00_15845 38d1e3c7c012349fc4f8839f7f161434 170 SUPERFAMILY SSF50249 1 170 8.91E-60 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold COP00_10495 9a75d6ed0bf5017a4a705777d27737f1 767 SMART SM00387 674 767 1.4E-7 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase COP00_10495 9a75d6ed0bf5017a4a705777d27737f1 767 SUPERFAMILY SSF55874 642 764 4.06E-18 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily COP00_10495 9a75d6ed0bf5017a4a705777d27737f1 767 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 678 765 3.6E-8 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase COP00_10495 9a75d6ed0bf5017a4a705777d27737f1 767 Pfam PF07730 Histidine kinase 567 636 1.3E-11 T 13-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 COP00_10495 9a75d6ed0bf5017a4a705777d27737f1 767 SUPERFAMILY SSF50156 37 104 1.97E-8 T 13-10-2018 IPR036034 PDZ superfamily GO:0005515 COP00_10495 9a75d6ed0bf5017a4a705777d27737f1 767 Gene3D G3DSA:2.30.42.10 2 109 1.7E-8 T 13-10-2018 COP00_10495 9a75d6ed0bf5017a4a705777d27737f1 767 Pfam PF13180 PDZ domain 40 103 3.3E-6 T 13-10-2018 IPR001478 PDZ domain GO:0005515 COP00_10495 9a75d6ed0bf5017a4a705777d27737f1 767 Gene3D G3DSA:3.30.565.10 634 767 1.5E-29 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily COP00_15345 df989f66d7f2f98bbf85066ae0a01ad5 216 SUPERFAMILY SSF56784 1 211 9.49E-41 T 13-10-2018 IPR036412 HAD-like superfamily COP00_15345 df989f66d7f2f98bbf85066ae0a01ad5 216 Gene3D G3DSA:3.40.50.1000 7 207 2.2E-46 T 13-10-2018 IPR023214 HAD superfamily COP00_15345 df989f66d7f2f98bbf85066ae0a01ad5 216 TIGRFAM TIGR01489 DKMTPPase-SF: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase 5 183 2.0E-42 T 13-10-2018 IPR006384 Pyridoxal phosphate phosphatase-related GO:0016791 COP00_15345 df989f66d7f2f98bbf85066ae0a01ad5 216 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 5 174 6.4E-28 T 13-10-2018 COP00_15345 df989f66d7f2f98bbf85066ae0a01ad5 216 Pfam PF12710 haloacid dehalogenase-like hydrolase 7 169 7.3E-11 T 13-10-2018 COP00_15345 df989f66d7f2f98bbf85066ae0a01ad5 216 Gene3D G3DSA:3.90.1470.20 15 132 2.2E-46 T 13-10-2018 COP00_16610 62252025cc3b52b2a0bd37c2c44c9473 177 Gene3D G3DSA:2.30.30.30 119 177 1.3E-24 T 13-10-2018 IPR014722 Ribosomal protein L2, domain 2 COP00_16610 62252025cc3b52b2a0bd37c2c44c9473 177 Gene3D G3DSA:3.30.70.940 1 118 2.3E-45 T 13-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 COP00_16610 62252025cc3b52b2a0bd37c2c44c9473 177 SUPERFAMILY SSF82679 2 114 1.01E-40 T 13-10-2018 IPR036735 NusG, N-terminal domain superfamily GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 COP00_16610 62252025cc3b52b2a0bd37c2c44c9473 177 SMART SM00739 123 150 1.2E-6 T 13-10-2018 IPR005824 KOW COP00_16610 62252025cc3b52b2a0bd37c2c44c9473 177 Pfam PF02357 Transcription termination factor nusG 3 110 2.8E-28 T 13-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 COP00_16610 62252025cc3b52b2a0bd37c2c44c9473 177 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 5 176 1.0E-68 T 13-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 COP00_16610 62252025cc3b52b2a0bd37c2c44c9473 177 ProSitePatterns PS01014 Transcription termination factor nusG signature. 160 169 - T 13-10-2018 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site COP00_16610 62252025cc3b52b2a0bd37c2c44c9473 177 SUPERFAMILY SSF50104 121 177 9.03E-20 T 13-10-2018 IPR008991 Translation protein SH3-like domain superfamily COP00_16610 62252025cc3b52b2a0bd37c2c44c9473 177 SMART SM00738 2 113 4.3E-54 T 13-10-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 COP00_16610 62252025cc3b52b2a0bd37c2c44c9473 177 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 2 177 29.963 T 13-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 COP00_16610 62252025cc3b52b2a0bd37c2c44c9473 177 Pfam PF00467 KOW motif 128 157 1.3E-8 T 13-10-2018 IPR005824 KOW COP00_16610 62252025cc3b52b2a0bd37c2c44c9473 177 PRINTS PR00338 Transcription termination factor NUSG signature 135 150 1.1E-21 T 13-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 COP00_16610 62252025cc3b52b2a0bd37c2c44c9473 177 PRINTS PR00338 Transcription termination factor NUSG signature 57 69 1.1E-21 T 13-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 COP00_16610 62252025cc3b52b2a0bd37c2c44c9473 177 PRINTS PR00338 Transcription termination factor NUSG signature 153 169 1.1E-21 T 13-10-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 COP00_08155 60f60e05b128cda2bbd80ab3c1a4cf54 216 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 13 109 8.1E-26 T 13-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 COP00_08155 60f60e05b128cda2bbd80ab3c1a4cf54 216 Gene3D G3DSA:1.10.3720.10 9 216 8.0E-48 T 13-10-2018 IPR035906 MetI-like superfamily COP00_08155 60f60e05b128cda2bbd80ab3c1a4cf54 216 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 45 214 5.5E-18 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 COP00_08155 60f60e05b128cda2bbd80ab3c1a4cf54 216 SUPERFAMILY SSF161098 15 201 4.58E-40 T 13-10-2018 IPR035906 MetI-like superfamily COP00_19170 896584865a6e5a17bcc084611fb2875b 213 ProSitePatterns PS00776 Glycosyl hydrolases family 11 (GH11) active site signature 1. 103 113 - T 13-10-2018 IPR018208 Glycoside hydrolase family 11, active site 1 MetaCyc: PWY-6717|MetaCyc: PWY-6784 COP00_19170 896584865a6e5a17bcc084611fb2875b 213 Gene3D G3DSA:2.60.120.180 29 213 4.5E-81 T 13-10-2018 IPR013319 Glycoside hydrolase family 11/12 GO:0004553 MetaCyc: PWY-6717|MetaCyc: PWY-6784 COP00_19170 896584865a6e5a17bcc084611fb2875b 213 PRINTS PR00911 Glycosyl hydrolase family 11 signature 150 155 5.9E-19 T 13-10-2018 IPR001137 Glycoside hydrolase family 11 GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 COP00_19170 896584865a6e5a17bcc084611fb2875b 213 PRINTS PR00911 Glycosyl hydrolase family 11 signature 155 164 5.9E-19 T 13-10-2018 IPR001137 Glycoside hydrolase family 11 GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 COP00_19170 896584865a6e5a17bcc084611fb2875b 213 PRINTS PR00911 Glycosyl hydrolase family 11 signature 103 113 5.9E-19 T 13-10-2018 IPR001137 Glycoside hydrolase family 11 GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 COP00_19170 896584865a6e5a17bcc084611fb2875b 213 PRINTS PR00911 Glycosyl hydrolase family 11 signature 93 102 5.9E-19 T 13-10-2018 IPR001137 Glycoside hydrolase family 11 GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 COP00_19170 896584865a6e5a17bcc084611fb2875b 213 PRINTS PR00911 Glycosyl hydrolase family 11 signature 181 189 5.9E-19 T 13-10-2018 IPR001137 Glycoside hydrolase family 11 GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 COP00_19170 896584865a6e5a17bcc084611fb2875b 213 PRINTS PR00911 Glycosyl hydrolase family 11 signature 129 135 5.9E-19 T 13-10-2018 IPR001137 Glycoside hydrolase family 11 GO:0004553|GO:0005975 MetaCyc: PWY-6717|MetaCyc: PWY-6784 COP00_19170 896584865a6e5a17bcc084611fb2875b 213 ProSitePatterns PS00777 Glycosyl hydrolases family 11 (GH11) active site signature 2. 197 208 - T 13-10-2018 IPR033119 Glycoside hydrolase family 11, active site 2 MetaCyc: PWY-6717|MetaCyc: PWY-6784 COP00_19170 896584865a6e5a17bcc084611fb2875b 213 Pfam PF00457 Glycosyl hydrolases family 11 31 211 7.5E-69 T 13-10-2018 IPR033123 Glycosyl hydrolases family 11 (GH11) domain MetaCyc: PWY-6717|MetaCyc: PWY-6784 COP00_19170 896584865a6e5a17bcc084611fb2875b 213 SUPERFAMILY SSF49899 33 213 1.69E-71 T 13-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily COP00_05210 457697c18fc40405217d059c1c066d62 162 SUPERFAMILY SSF53597 1 161 1.83E-60 T 13-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 COP00_05210 457697c18fc40405217d059c1c066d62 162 Pfam PF00186 Dihydrofolate reductase 1 160 1.0E-64 T 13-10-2018 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0046654|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 COP00_05210 457697c18fc40405217d059c1c066d62 162 ProSitePatterns PS00075 Dihydrofolate reductase (DHFR) domain signature. 13 35 - T 13-10-2018 IPR017925 Dihydrofolate reductase conserved site GO:0004146|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-1474151|Reactome: R-HSA-196757|Reactome: R-HSA-539107 COP00_05210 457697c18fc40405217d059c1c066d62 162 PRINTS PR00070 Dihydrofolate reductase signature 13 23 1.1E-15 T 13-10-2018 COP00_05210 457697c18fc40405217d059c1c066d62 162 PRINTS PR00070 Dihydrofolate reductase signature 40 51 1.1E-15 T 13-10-2018 COP00_05210 457697c18fc40405217d059c1c066d62 162 PRINTS PR00070 Dihydrofolate reductase signature 92 106 1.1E-15 T 13-10-2018 COP00_05210 457697c18fc40405217d059c1c066d62 162 PRINTS PR00070 Dihydrofolate reductase signature 27 35 1.1E-15 T 13-10-2018 COP00_05210 457697c18fc40405217d059c1c066d62 162 Gene3D G3DSA:3.40.430.10 1 162 3.8E-63 T 13-10-2018 IPR024072 Dihydrofolate reductase-like domain superfamily Reactome: R-HSA-196757 COP00_05210 457697c18fc40405217d059c1c066d62 162 PIRSF PIRSF000194 1 162 2.6E-64 T 13-10-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0046654|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614 COP00_16425 2001f6aae02bfaf830278e1ea5a6c2b6 166 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 89 100 - T 13-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 COP00_16425 2001f6aae02bfaf830278e1ea5a6c2b6 166 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 5 134 8.4E-49 T 13-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 COP00_16425 2001f6aae02bfaf830278e1ea5a6c2b6 166 SUPERFAMILY SSF55083 3 142 8.24E-55 T 13-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 COP00_16425 2001f6aae02bfaf830278e1ea5a6c2b6 166 Gene3D G3DSA:3.30.70.560 2 160 9.3E-58 T 13-10-2018 IPR035907 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK superfamily KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 COP00_16425 2001f6aae02bfaf830278e1ea5a6c2b6 166 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 6 134 3.7E-40 T 13-10-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 COP00_08960 0754b5f9a5801a4cecd88cd6c88e7f7c 119 Pfam PF00453 Ribosomal protein L20 3 109 4.5E-50 T 13-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_08960 0754b5f9a5801a4cecd88cd6c88e7f7c 119 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 3.7E-51 T 13-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_08960 0754b5f9a5801a4cecd88cd6c88e7f7c 119 SUPERFAMILY SSF74731 2 116 1.83E-50 T 13-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_08960 0754b5f9a5801a4cecd88cd6c88e7f7c 119 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 21 70 4.0E-14 T 13-10-2018 COP00_08960 0754b5f9a5801a4cecd88cd6c88e7f7c 119 Gene3D G3DSA:1.10.1900.20 56 119 4.0E-29 T 13-10-2018 IPR035566 Ribosomal protein L20, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_08960 0754b5f9a5801a4cecd88cd6c88e7f7c 119 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 13-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_08960 0754b5f9a5801a4cecd88cd6c88e7f7c 119 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 30.092 T 13-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_08960 0754b5f9a5801a4cecd88cd6c88e7f7c 119 PRINTS PR00062 Ribosomal protein L20 signature 42 71 3.8E-41 T 13-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_08960 0754b5f9a5801a4cecd88cd6c88e7f7c 119 PRINTS PR00062 Ribosomal protein L20 signature 75 101 3.8E-41 T 13-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_08960 0754b5f9a5801a4cecd88cd6c88e7f7c 119 PRINTS PR00062 Ribosomal protein L20 signature 12 41 3.8E-41 T 13-10-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_08960 0754b5f9a5801a4cecd88cd6c88e7f7c 119 Gene3D G3DSA:1.10.720.90 2 55 9.3E-27 T 13-10-2018 COP00_20355 126d0e01c50f0c85217dc8f2c8f13085 303 SMART SM00046 3 128 1.3E-6 T 13-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 COP00_20355 126d0e01c50f0c85217dc8f2c8f13085 303 Pfam PF00781 Diacylglycerol kinase catalytic domain 4 128 3.7E-38 T 13-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 COP00_20355 126d0e01c50f0c85217dc8f2c8f13085 303 Gene3D G3DSA:2.60.200.40 130 287 8.8E-44 T 13-10-2018 COP00_20355 126d0e01c50f0c85217dc8f2c8f13085 303 TIGRFAM TIGR00147 TIGR00147: lipid kinase, YegS/Rv2252/BmrU family 1 293 1.5E-121 T 13-10-2018 IPR005218 Diacylglycerol/lipid kinase COP00_20355 126d0e01c50f0c85217dc8f2c8f13085 303 Gene3D G3DSA:3.40.50.10330 1 129 2.7E-46 T 13-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 COP00_20355 126d0e01c50f0c85217dc8f2c8f13085 303 SUPERFAMILY SSF111331 1 295 1.54E-87 T 13-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily COP00_16940 6ce5d3a6d1f8f094901cc1e80aac6a73 409 PIRSF PIRSF016719 1 409 7.9E-183 T 13-10-2018 IPR008302 Uncharacterised conserved protein UCP016719 COP00_16940 6ce5d3a6d1f8f094901cc1e80aac6a73 409 Gene3D G3DSA:3.90.1150.140 247 394 9.4E-161 T 13-10-2018 COP00_16940 6ce5d3a6d1f8f094901cc1e80aac6a73 409 Pfam PF07075 Protein of unknown function (DUF1343) 52 409 1.9E-155 T 13-10-2018 IPR008302 Uncharacterised conserved protein UCP016719 COP00_16940 6ce5d3a6d1f8f094901cc1e80aac6a73 409 Gene3D G3DSA:3.40.50.12170 36 409 9.4E-161 T 13-10-2018 COP00_15610 70213975ed95ddb6154b18875e6f617a 300 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 COP00_15610 70213975ed95ddb6154b18875e6f617a 300 Gene3D G3DSA:3.40.50.300 2 230 9.6E-59 T 13-10-2018 COP00_15610 70213975ed95ddb6154b18875e6f617a 300 SUPERFAMILY SSF52540 4 221 5.53E-56 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_15610 70213975ed95ddb6154b18875e6f617a 300 SMART SM00382 29 214 6.3E-14 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_15610 70213975ed95ddb6154b18875e6f617a 300 Pfam PF00005 ABC transporter 21 157 1.6E-28 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 COP00_00865 0e1c894e863e2f173264b8a5922af948 263 Pfam PF08478 POTRA domain, FtsQ-type 54 123 9.6E-21 T 13-10-2018 IPR013685 POTRA domain, FtsQ-type COP00_00865 0e1c894e863e2f173264b8a5922af948 263 Pfam PF03799 Cell division protein FtsQ 128 238 3.6E-8 T 13-10-2018 IPR005548 Cell division protein FtsQ/DivIB COP00_00865 0e1c894e863e2f173264b8a5922af948 263 Gene3D G3DSA:3.40.50.10960 122 236 1.0E-39 T 13-10-2018 COP00_00865 0e1c894e863e2f173264b8a5922af948 263 Hamap MF_00912 Cell division protein DivIB [divIB]. 13 253 30.431 T 13-10-2018 IPR026580 Cell division protein DivIB COP00_00865 0e1c894e863e2f173264b8a5922af948 263 Gene3D G3DSA:3.10.20.310 54 121 2.2E-6 T 13-10-2018 COP00_06415 9eae18ede3db04f10868fd4306c38ab9 553 Gene3D G3DSA:1.10.1200.140 377 439 1.2E-123 T 13-10-2018 COP00_06415 9eae18ede3db04f10868fd4306c38ab9 553 Gene3D G3DSA:3.40.720.10 41 442 1.2E-123 T 13-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 COP00_06415 9eae18ede3db04f10868fd4306c38ab9 553 Pfam PF00245 Alkaline phosphatase 41 462 2.0E-87 T 13-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 COP00_06415 9eae18ede3db04f10868fd4306c38ab9 553 SMART SM00098 41 465 2.8E-76 T 13-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 COP00_06415 9eae18ede3db04f10868fd4306c38ab9 553 PRINTS PR00113 Alkaline phosphatase signature 138 158 1.1E-31 T 13-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 COP00_06415 9eae18ede3db04f10868fd4306c38ab9 553 PRINTS PR00113 Alkaline phosphatase signature 259 288 1.1E-31 T 13-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 COP00_06415 9eae18ede3db04f10868fd4306c38ab9 553 PRINTS PR00113 Alkaline phosphatase signature 40 60 1.1E-31 T 13-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 COP00_06415 9eae18ede3db04f10868fd4306c38ab9 553 PRINTS PR00113 Alkaline phosphatase signature 182 192 1.1E-31 T 13-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 COP00_06415 9eae18ede3db04f10868fd4306c38ab9 553 SUPERFAMILY SSF53649 34 472 3.21E-112 T 13-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 COP00_07130 bcd8dabad713a0ade1b96f43193e0b29 373 Gene3D G3DSA:3.30.70.120 133 240 1.9E-44 T 13-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal COP00_07130 bcd8dabad713a0ade1b96f43193e0b29 373 SUPERFAMILY SSF102705 6 372 4.97E-134 T 13-10-2018 IPR036069 GTP cyclohydrolase 1 type 2/Nif3 superfamily COP00_07130 bcd8dabad713a0ade1b96f43193e0b29 373 Gene3D G3DSA:3.40.1390.30 4 123 3.3E-40 T 13-10-2018 COP00_07130 bcd8dabad713a0ade1b96f43193e0b29 373 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 5 369 1.4E-102 T 13-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 COP00_07130 bcd8dabad713a0ade1b96f43193e0b29 373 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 10 351 1.3E-81 T 13-10-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 COP00_07130 bcd8dabad713a0ade1b96f43193e0b29 373 PIRSF PIRSF037489 3 373 1.3E-160 T 13-10-2018 IPR017221 GTP cyclohydrolase 1 type 2//Nif3, bacteria COP00_20835 8697078d7cc660455dd5431070f53fdf 156 SUPERFAMILY SSF52788 1 150 7.33E-48 T 13-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily COP00_20835 8697078d7cc660455dd5431070f53fdf 156 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 47 63 6.8E-15 T 13-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 COP00_20835 8697078d7cc660455dd5431070f53fdf 156 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 4 21 6.8E-15 T 13-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 COP00_20835 8697078d7cc660455dd5431070f53fdf 156 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 123 138 6.8E-15 T 13-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 COP00_20835 8697078d7cc660455dd5431070f53fdf 156 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 81 96 6.8E-15 T 13-10-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 COP00_20835 8697078d7cc660455dd5431070f53fdf 156 Gene3D G3DSA:3.40.50.2300 1 156 1.2E-62 T 13-10-2018 COP00_20835 8697078d7cc660455dd5431070f53fdf 156 SMART SM00226 2 149 4.5E-54 T 13-10-2018 IPR023485 Phosphotyrosine protein phosphatase I COP00_20835 8697078d7cc660455dd5431070f53fdf 156 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 4 147 6.7E-43 T 13-10-2018 IPR023485 Phosphotyrosine protein phosphatase I COP00_23370 10d51b3b65a2e42f28f1b831a2abc682 132 Gene3D G3DSA:2.30.30.290 56 131 9.4E-14 T 13-10-2018 IPR023385 YopX-like, C-terminal COP00_23370 10d51b3b65a2e42f28f1b831a2abc682 132 SUPERFAMILY SSF159006 2 124 1.29E-21 T 13-10-2018 COP00_23370 10d51b3b65a2e42f28f1b831a2abc682 132 Pfam PF09643 YopX protein 52 123 3.1E-19 T 13-10-2018 IPR019096 YopX protein COP00_07360 39af06ceb4944e692fc35e6e60f2a932 346 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 14 336 1.2E-84 T 13-10-2018 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 COP00_07360 39af06ceb4944e692fc35e6e60f2a932 346 Gene3D G3DSA:3.40.50.300 1 143 1.8E-46 T 13-10-2018 COP00_07360 39af06ceb4944e692fc35e6e60f2a932 346 Gene3D G3DSA:1.20.272.10 214 344 6.2E-41 T 13-10-2018 COP00_07360 39af06ceb4944e692fc35e6e60f2a932 346 SUPERFAMILY SSF52540 5 213 3.72E-24 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_07360 39af06ceb4944e692fc35e6e60f2a932 346 Gene3D G3DSA:1.10.8.60 144 213 4.1E-22 T 13-10-2018 COP00_07360 39af06ceb4944e692fc35e6e60f2a932 346 SUPERFAMILY SSF48019 217 336 1.46E-25 T 13-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 COP00_07360 39af06ceb4944e692fc35e6e60f2a932 346 Pfam PF06144 DNA polymerase III, delta subunit 18 193 7.0E-55 T 13-10-2018 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 COP00_14605 c9bb3bd0b424b48952f7ab23c62d5cc1 328 Gene3D G3DSA:3.40.50.720 5 306 1.1E-114 T 13-10-2018 COP00_14605 c9bb3bd0b424b48952f7ab23c62d5cc1 328 Pfam PF02719 Polysaccharide biosynthesis protein 7 272 2.2E-95 T 13-10-2018 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain COP00_14605 c9bb3bd0b424b48952f7ab23c62d5cc1 328 SUPERFAMILY SSF51735 1 261 2.03E-58 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily COP00_14605 c9bb3bd0b424b48952f7ab23c62d5cc1 328 Gene3D G3DSA:3.90.25.30 165 314 1.1E-114 T 13-10-2018 COP00_03885 0ea2b4ca9541a0177e9bba0c9a11c417 353 PIRSF PIRSF005508 1 353 3.3E-142 T 13-10-2018 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 COP00_03885 0ea2b4ca9541a0177e9bba0c9a11c417 353 Gene3D G3DSA:1.20.1530.20 2 344 6.6E-29 T 13-10-2018 IPR038770 Sodium/solute symporter superfamily COP00_03885 0ea2b4ca9541a0177e9bba0c9a11c417 353 Pfam PF01758 Sodium Bile acid symporter family 54 250 2.2E-68 T 13-10-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 COP00_03885 0ea2b4ca9541a0177e9bba0c9a11c417 353 TIGRFAM TIGR00832 acr3: arsenical-resistance protein 9 338 9.3E-141 T 13-10-2018 IPR004706 Arsenical-resistance protein Acr3 GO:0015103|GO:0015297|GO:0016021 COP00_14265 ee415facaed74b7f8de2756c2a2acca8 333 Gene3D G3DSA:3.20.20.30 1 333 2.0E-103 T 13-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 COP00_14265 ee415facaed74b7f8de2756c2a2acca8 333 Pfam PF00296 Luciferase-like monooxygenase 16 302 1.7E-39 T 13-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 COP00_14265 ee415facaed74b7f8de2756c2a2acca8 333 TIGRFAM TIGR03558 oxido_grp_1: luciferase family oxidoreductase, group 1 4 330 1.3E-125 T 13-10-2018 IPR019949 Luciferase family oxidoreductase, group 1 COP00_14265 ee415facaed74b7f8de2756c2a2acca8 333 SUPERFAMILY SSF51679 3 329 1.28E-75 T 13-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 COP00_24000 5512ca0e4750faa1683335a759a0d45f 317 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 242 252 - T 13-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site COP00_24000 5512ca0e4750faa1683335a759a0d45f 317 PRINTS PR00723 Subtilisin serine protease family (S8) signature 241 257 7.1E-23 T 13-10-2018 IPR015500 Peptidase S8, subtilisin-related COP00_24000 5512ca0e4750faa1683335a759a0d45f 317 PRINTS PR00723 Subtilisin serine protease family (S8) signature 81 94 7.1E-23 T 13-10-2018 IPR015500 Peptidase S8, subtilisin-related COP00_24000 5512ca0e4750faa1683335a759a0d45f 317 PRINTS PR00723 Subtilisin serine protease family (S8) signature 39 58 7.1E-23 T 13-10-2018 IPR015500 Peptidase S8, subtilisin-related COP00_24000 5512ca0e4750faa1683335a759a0d45f 317 Gene3D G3DSA:3.40.50.200 1 305 2.8E-114 T 13-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 COP00_24000 5512ca0e4750faa1683335a759a0d45f 317 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 44 55 - T 13-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site COP00_24000 5512ca0e4750faa1683335a759a0d45f 317 SUPERFAMILY SSF52743 20 295 9.43E-90 T 13-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 COP00_24000 5512ca0e4750faa1683335a759a0d45f 317 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 85 95 - T 13-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site COP00_24000 5512ca0e4750faa1683335a759a0d45f 317 Pfam PF00082 Subtilase family 39 281 6.5E-62 T 13-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 COP00_20495 0c9be9786e0929c6cbcb7de07ea90455 305 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 18 295 1.2E-82 T 13-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 COP00_20495 0c9be9786e0929c6cbcb7de07ea90455 305 Pfam PF01040 UbiA prenyltransferase family 31 282 1.6E-54 T 13-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 COP00_20495 0c9be9786e0929c6cbcb7de07ea90455 305 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 14 298 17.103 T 13-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 COP00_20495 0c9be9786e0929c6cbcb7de07ea90455 305 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 74 96 - T 13-10-2018 IPR030470 UbiA prenyltransferase conserved site COP00_20495 0c9be9786e0929c6cbcb7de07ea90455 305 Gene3D G3DSA:1.10.357.140 29 180 6.3E-20 T 13-10-2018 COP00_06620 0d59a5d3c9c0a11ad7a1abc382936bdc 159 Gene3D G3DSA:2.40.50.100 80 156 1.6E-27 T 13-10-2018 COP00_06620 0d59a5d3c9c0a11ad7a1abc382936bdc 159 Pfam PF00364 Biotin-requiring enzyme 83 154 1.3E-21 T 13-10-2018 IPR000089 Biotin/lipoyl attachment COP00_06620 0d59a5d3c9c0a11ad7a1abc382936bdc 159 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 2 157 5.5E-61 T 13-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 COP00_06620 0d59a5d3c9c0a11ad7a1abc382936bdc 159 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 118 131 4.6E-15 T 13-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 COP00_06620 0d59a5d3c9c0a11ad7a1abc382936bdc 159 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 103 117 4.6E-15 T 13-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 COP00_06620 0d59a5d3c9c0a11ad7a1abc382936bdc 159 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 86 99 4.6E-15 T 13-10-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 COP00_06620 0d59a5d3c9c0a11ad7a1abc382936bdc 159 SUPERFAMILY SSF51230 80 156 1.83E-22 T 13-10-2018 IPR011053 Single hybrid motif COP00_01415 df4e1401ec1feb420269c89bfce50d27 375 PRINTS PR00956 Flagellar motor switch protein FliN signature 312 328 8.2E-29 T 13-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 COP00_01415 df4e1401ec1feb420269c89bfce50d27 375 PRINTS PR00956 Flagellar motor switch protein FliN signature 341 356 8.2E-29 T 13-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 COP00_01415 df4e1401ec1feb420269c89bfce50d27 375 PRINTS PR00956 Flagellar motor switch protein FliN signature 295 311 8.2E-29 T 13-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 COP00_01415 df4e1401ec1feb420269c89bfce50d27 375 PRINTS PR00956 Flagellar motor switch protein FliN signature 328 341 8.2E-29 T 13-10-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 COP00_01415 df4e1401ec1feb420269c89bfce50d27 375 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 295 365 4.5E-24 T 13-10-2018 IPR001543 Surface presentation of antigen (SpoA) COP00_01415 df4e1401ec1feb420269c89bfce50d27 375 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 292 367 3.5E-31 T 13-10-2018 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 COP00_01415 df4e1401ec1feb420269c89bfce50d27 375 SUPERFAMILY SSF101801 292 373 8.5E-24 T 13-10-2018 IPR036429 SpoA-like superfamily COP00_01415 df4e1401ec1feb420269c89bfce50d27 375 SUPERFAMILY SSF103039 31 219 1.66E-51 T 13-10-2018 IPR028976 CheC-like superfamily COP00_01415 df4e1401ec1feb420269c89bfce50d27 375 Gene3D G3DSA:2.30.330.10 283 375 2.4E-35 T 13-10-2018 IPR036429 SpoA-like superfamily COP00_01415 df4e1401ec1feb420269c89bfce50d27 375 Pfam PF04509 CheC-like family 131 166 1.4E-15 T 13-10-2018 IPR007597 CheC-like protein GO:0016787 COP00_01415 df4e1401ec1feb420269c89bfce50d27 375 Pfam PF04509 CheC-like family 34 70 1.5E-15 T 13-10-2018 IPR007597 CheC-like protein GO:0016787 COP00_01415 df4e1401ec1feb420269c89bfce50d27 375 Gene3D G3DSA:3.40.1550.10 30 224 1.9E-55 T 13-10-2018 IPR028976 CheC-like superfamily COP00_22165 1bd595c5a56b9ef762962af3acba5385 139 Pfam PF01230 HIT domain 12 106 3.0E-27 T 13-10-2018 IPR001310 Histidine triad (HIT) protein COP00_22165 1bd595c5a56b9ef762962af3acba5385 139 ProSitePatterns PS00892 HIT domain signature. 86 104 - T 13-10-2018 IPR019808 Histidine triad, conserved site COP00_22165 1bd595c5a56b9ef762962af3acba5385 139 SUPERFAMILY SSF54197 2 138 3.97E-47 T 13-10-2018 IPR036265 HIT-like superfamily COP00_22165 1bd595c5a56b9ef762962af3acba5385 139 Gene3D G3DSA:3.30.428.10 1 112 1.5E-40 T 13-10-2018 IPR036265 HIT-like superfamily COP00_22165 1bd595c5a56b9ef762962af3acba5385 139 Gene3D G3DSA:1.20.5.1170 114 139 7.2E-14 T 13-10-2018 COP00_22165 1bd595c5a56b9ef762962af3acba5385 139 PRINTS PR00332 Histidine triad family signature 26 44 9.3E-18 T 13-10-2018 IPR001310 Histidine triad (HIT) protein COP00_22165 1bd595c5a56b9ef762962af3acba5385 139 PRINTS PR00332 Histidine triad family signature 93 103 9.3E-18 T 13-10-2018 IPR001310 Histidine triad (HIT) protein COP00_22165 1bd595c5a56b9ef762962af3acba5385 139 PRINTS PR00332 Histidine triad family signature 5 21 9.3E-18 T 13-10-2018 IPR001310 Histidine triad (HIT) protein COP00_07990 cca046adc4dcdf8784e3a21a972481e5 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 9.0E-10 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 COP00_07990 cca046adc4dcdf8784e3a21a972481e5 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 9.0E-10 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 COP00_07990 cca046adc4dcdf8784e3a21a972481e5 296 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 9.0E-10 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 COP00_07990 cca046adc4dcdf8784e3a21a972481e5 296 Gene3D G3DSA:1.10.10.10 1 85 1.6E-24 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_07990 cca046adc4dcdf8784e3a21a972481e5 296 Gene3D G3DSA:3.40.190.290 91 294 1.5E-53 T 13-10-2018 COP00_07990 cca046adc4dcdf8784e3a21a972481e5 296 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 6.1E-19 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 COP00_07990 cca046adc4dcdf8784e3a21a972481e5 296 SUPERFAMILY SSF46785 2 82 5.08E-19 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_07990 cca046adc4dcdf8784e3a21a972481e5 296 Pfam PF03466 LysR substrate binding domain 91 288 1.0E-44 T 13-10-2018 IPR005119 LysR, substrate-binding COP00_07990 cca046adc4dcdf8784e3a21a972481e5 296 SUPERFAMILY SSF53850 91 293 7.5E-41 T 13-10-2018 COP00_05510 f073f48804b41dba38531787daf6323c 927 Pfam PF13307 Helicase C-terminal domain 748 909 6.9E-35 T 13-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 COP00_05510 f073f48804b41dba38531787daf6323c 927 Gene3D G3DSA:3.40.50.300 256 514 6.9E-44 T 13-10-2018 COP00_05510 f073f48804b41dba38531787daf6323c 927 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 3 168 1.4E-32 T 13-10-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 COP00_05510 f073f48804b41dba38531787daf6323c 927 SUPERFAMILY SSF53098 5 200 5.79E-56 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily COP00_05510 f073f48804b41dba38531787daf6323c 927 SMART SM00479 5 172 4.7E-51 T 13-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III COP00_05510 f073f48804b41dba38531787daf6323c 927 Pfam PF00929 Exonuclease 7 163 1.3E-36 T 13-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III COP00_05510 f073f48804b41dba38531787daf6323c 927 Hamap MF_02206 3'-5' exonuclease DinG [dinG]. 2 924 26.401 T 13-10-2018 IPR006310 3'-5' exonuclease DinG GO:0005524|GO:0008408 COP00_05510 f073f48804b41dba38531787daf6323c 927 Gene3D G3DSA:3.30.420.10 1 171 2.1E-50 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 COP00_05510 f073f48804b41dba38531787daf6323c 927 Pfam PF04851 Type III restriction enzyme, res subunit 256 469 9.1E-8 T 13-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 COP00_05510 f073f48804b41dba38531787daf6323c 927 SMART SM00491 763 896 8.3E-42 T 13-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 COP00_05510 f073f48804b41dba38531787daf6323c 927 SUPERFAMILY SSF52540 272 890 7.14E-26 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_05510 f073f48804b41dba38531787daf6323c 927 TIGRFAM TIGR01407 dinG_rel: putative DnaQ family exonuclease/DinG family helicase 5 910 7.1E-251 T 13-10-2018 IPR006310 3'-5' exonuclease DinG GO:0005524|GO:0008408 COP00_05510 f073f48804b41dba38531787daf6323c 927 Gene3D G3DSA:3.40.50.300 716 918 1.2E-38 T 13-10-2018 COP00_05510 f073f48804b41dba38531787daf6323c 927 SMART SM00487 254 522 8.7E-5 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain COP00_15255 589651d9031ad3d7e645372fa8e0379d 292 Pfam PF01116 Fructose-bisphosphate aldolase class-II 4 283 3.6E-96 T 13-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 COP00_15255 589651d9031ad3d7e645372fa8e0379d 292 PIRSF PIRSF001359 1 284 1.5E-119 T 13-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 COP00_15255 589651d9031ad3d7e645372fa8e0379d 292 TIGRFAM TIGR01859 fruc_bis_ald_: fructose-1,6-bisphosphate aldolase, class II 3 284 1.3E-123 T 13-10-2018 IPR011289 Fructose-1,6-bisphosphate aldolase, class 2 GO:0004332|GO:0006096|GO:0008270|GO:0030388 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385 COP00_15255 589651d9031ad3d7e645372fa8e0379d 292 Gene3D G3DSA:3.20.20.70 1 292 9.4E-106 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 COP00_15255 589651d9031ad3d7e645372fa8e0379d 292 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 2 284 8.7E-110 T 13-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 COP00_15255 589651d9031ad3d7e645372fa8e0379d 292 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 134 145 - T 13-10-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 COP00_15255 589651d9031ad3d7e645372fa8e0379d 292 SUPERFAMILY SSF51569 4 284 4.4E-97 T 13-10-2018 COP00_24525 35c6768d9e229536d0c12e900751bffa 384 Pfam PF05065 Phage capsid family 130 379 1.8E-14 T 13-10-2018 IPR024455 Phage capsid COP00_24525 35c6768d9e229536d0c12e900751bffa 384 SUPERFAMILY SSF56563 122 380 1.15E-28 T 13-10-2018 COP00_24525 35c6768d9e229536d0c12e900751bffa 384 TIGRFAM TIGR01554 major_cap_HK97: phage major capsid protein, HK97 family 13 380 1.1E-29 T 13-10-2018 IPR024455 Phage capsid COP00_00010 35c6768d9e229536d0c12e900751bffa 384 Pfam PF05065 Phage capsid family 130 379 1.8E-14 T 13-10-2018 IPR024455 Phage capsid COP00_00010 35c6768d9e229536d0c12e900751bffa 384 SUPERFAMILY SSF56563 122 380 1.15E-28 T 13-10-2018 COP00_00010 35c6768d9e229536d0c12e900751bffa 384 TIGRFAM TIGR01554 major_cap_HK97: phage major capsid protein, HK97 family 13 380 1.1E-29 T 13-10-2018 IPR024455 Phage capsid COP00_12385 35c6768d9e229536d0c12e900751bffa 384 Pfam PF05065 Phage capsid family 130 379 1.8E-14 T 13-10-2018 IPR024455 Phage capsid COP00_12385 35c6768d9e229536d0c12e900751bffa 384 SUPERFAMILY SSF56563 122 380 1.15E-28 T 13-10-2018 COP00_12385 35c6768d9e229536d0c12e900751bffa 384 TIGRFAM TIGR01554 major_cap_HK97: phage major capsid protein, HK97 family 13 380 1.1E-29 T 13-10-2018 IPR024455 Phage capsid COP00_09730 4cce3fbf373d8bcdf6e4634ab23a1988 632 Pfam PF00733 Asparagine synthase 240 610 9.3E-111 T 13-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 COP00_09730 4cce3fbf373d8bcdf6e4634ab23a1988 632 SUPERFAMILY SSF56235 1 225 8.58E-61 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal COP00_09730 4cce3fbf373d8bcdf6e4634ab23a1988 632 Pfam PF13537 Glutamine amidotransferase domain 51 168 1.5E-44 T 13-10-2018 IPR017932 Glutamine amidotransferase type 2 domain COP00_09730 4cce3fbf373d8bcdf6e4634ab23a1988 632 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 547 2.2E-182 T 13-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 COP00_09730 4cce3fbf373d8bcdf6e4634ab23a1988 632 SUPERFAMILY SSF52402 227 605 2.71E-87 T 13-10-2018 COP00_09730 4cce3fbf373d8bcdf6e4634ab23a1988 632 Gene3D G3DSA:3.60.20.10 3 188 2.3E-64 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal COP00_09730 4cce3fbf373d8bcdf6e4634ab23a1988 632 PIRSF PIRSF001589 1 628 3.4E-198 T 13-10-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 COP00_11915 f4761a828d5121f48e5163e82b755d58 134 SUPERFAMILY SSF47413 1 65 8.67E-17 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 COP00_11915 f4761a828d5121f48e5163e82b755d58 134 Pfam PF13560 Helix-turn-helix domain 4 62 3.8E-16 T 13-10-2018 COP00_11915 f4761a828d5121f48e5163e82b755d58 134 PIRSF PIRSF019364 1 134 4.1E-71 T 13-10-2018 IPR016759 HTH-type transcriptional repressor RghR GO:0006355 COP00_11915 f4761a828d5121f48e5163e82b755d58 134 SMART SM00530 7 63 3.7E-14 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 COP00_11915 f4761a828d5121f48e5163e82b755d58 134 Gene3D G3DSA:1.10.260.40 1 73 2.5E-18 T 13-10-2018 COP00_13495 da35c79ecdd7377181fd51cf04b815e1 921 Pfam PF00176 SNF2 family N-terminal domain 462 731 2.6E-56 T 13-10-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 COP00_13495 da35c79ecdd7377181fd51cf04b815e1 921 SMART SM00490 776 859 8.5E-22 T 13-10-2018 IPR001650 Helicase, C-terminal COP00_13495 da35c79ecdd7377181fd51cf04b815e1 921 SUPERFAMILY SSF52540 666 916 1.48E-61 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_13495 da35c79ecdd7377181fd51cf04b815e1 921 Pfam PF00271 Helicase conserved C-terminal domain 747 859 1.2E-19 T 13-10-2018 IPR001650 Helicase, C-terminal COP00_13495 da35c79ecdd7377181fd51cf04b815e1 921 SMART SM00487 444 633 3.5E-31 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain COP00_13495 da35c79ecdd7377181fd51cf04b815e1 921 Gene3D G3DSA:1.20.120.850 685 908 2.9E-85 T 13-10-2018 COP00_13495 da35c79ecdd7377181fd51cf04b815e1 921 Pfam PF12419 SNF2 Helicase protein 264 391 1.4E-34 T 13-10-2018 IPR022138 Helicase SWF/SNF-related COP00_13495 da35c79ecdd7377181fd51cf04b815e1 921 Gene3D G3DSA:3.40.50.10810 449 662 8.0E-67 T 13-10-2018 IPR038718 SNF2-like, N-terminal domain superfamily COP00_13495 da35c79ecdd7377181fd51cf04b815e1 921 SUPERFAMILY SSF52540 420 661 4.38E-57 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_13495 da35c79ecdd7377181fd51cf04b815e1 921 Gene3D G3DSA:3.40.50.300 671 873 2.9E-85 T 13-10-2018 COP00_15190 2cc7b941ca9c0751698c5938ae308946 223 SUPERFAMILY SSF51569 2 212 2.83E-82 T 13-10-2018 COP00_15190 2cc7b941ca9c0751698c5938ae308946 223 Gene3D G3DSA:3.20.20.70 1 219 7.6E-97 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 COP00_15190 2cc7b941ca9c0751698c5938ae308946 223 PIRSF PIRSF001357 1 223 2.9E-79 T 13-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 COP00_15190 2cc7b941ca9c0751698c5938ae308946 223 Pfam PF01791 DeoC/LacD family aldolase 4 211 3.0E-25 T 13-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 COP00_15190 2cc7b941ca9c0751698c5938ae308946 223 Hamap MF_00114 Deoxyribose-phosphate aldolase [deoC]. 1 216 37.071 T 13-10-2018 IPR028581 Deoxyribose-phosphate aldolase type I GO:0004139 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180 COP00_15190 2cc7b941ca9c0751698c5938ae308946 223 SMART SM01133 2 214 1.8E-104 T 13-10-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 COP00_15190 2cc7b941ca9c0751698c5938ae308946 223 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 3 211 1.4E-95 T 13-10-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 COP00_08610 a0563f87d5588fb42f282fed2e819af3 518 SMART SM00917 368 501 1.7E-31 T 13-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 COP00_08610 a0563f87d5588fb42f282fed2e819af3 518 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 1 510 42.402 T 13-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 COP00_08610 a0563f87d5588fb42f282fed2e819af3 518 Gene3D G3DSA:3.30.160.270 392 501 3.1E-10 T 13-10-2018 COP00_08610 a0563f87d5588fb42f282fed2e819af3 518 Pfam PF08502 LeuA allosteric (dimerisation) domain 368 501 3.3E-35 T 13-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 COP00_08610 a0563f87d5588fb42f282fed2e819af3 518 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 11 27 - T 13-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 COP00_08610 a0563f87d5588fb42f282fed2e819af3 518 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 198 211 - T 13-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 COP00_08610 a0563f87d5588fb42f282fed2e819af3 518 Pfam PF00682 HMGL-like 3 272 1.2E-93 T 13-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 COP00_08610 a0563f87d5588fb42f282fed2e819af3 518 Gene3D G3DSA:3.20.20.70 1 275 2.9E-114 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 COP00_08610 a0563f87d5588fb42f282fed2e819af3 518 Gene3D G3DSA:1.10.238.260 279 391 1.9E-36 T 13-10-2018 COP00_08610 a0563f87d5588fb42f282fed2e819af3 518 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 3 498 4.4E-236 T 13-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 COP00_08610 a0563f87d5588fb42f282fed2e819af3 518 SUPERFAMILY SSF110921 392 500 2.88E-19 T 13-10-2018 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 COP00_08610 a0563f87d5588fb42f282fed2e819af3 518 SUPERFAMILY SSF51569 2 290 5.23E-95 T 13-10-2018 COP00_14720 0647c8b4f1a0020fdf5c43323da2c227 280 SUPERFAMILY SSF53613 8 278 2.62E-69 T 13-10-2018 IPR029056 Ribokinase-like COP00_14720 0647c8b4f1a0020fdf5c43323da2c227 280 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 8 276 8.9E-80 T 13-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 COP00_14720 0647c8b4f1a0020fdf5c43323da2c227 280 Pfam PF01256 Carbohydrate kinase 34 272 8.2E-67 T 13-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 COP00_14720 0647c8b4f1a0020fdf5c43323da2c227 280 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 10 276 20.174 T 13-10-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 COP00_14720 0647c8b4f1a0020fdf5c43323da2c227 280 Gene3D G3DSA:3.40.1190.20 3 279 1.2E-84 T 13-10-2018 IPR029056 Ribokinase-like COP00_14720 0647c8b4f1a0020fdf5c43323da2c227 280 ProSitePatterns PS01050 YjeF C-terminal domain signature 2. 215 225 - T 13-10-2018 IPR017953 Carbohydrate kinase, predicted, conserved site COP00_09130 f227066cda9a694998d64405289414d4 291 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 3 282 38.919 T 13-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 COP00_09130 f227066cda9a694998d64405289414d4 291 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 17 284 1.7E-136 T 13-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 COP00_09130 f227066cda9a694998d64405289414d4 291 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 252 261 4.4E-38 T 13-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 COP00_09130 f227066cda9a694998d64405289414d4 291 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 201 218 4.4E-38 T 13-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 COP00_09130 f227066cda9a694998d64405289414d4 291 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 230 241 4.4E-38 T 13-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 COP00_09130 f227066cda9a694998d64405289414d4 291 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 130 144 4.4E-38 T 13-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 COP00_09130 f227066cda9a694998d64405289414d4 291 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 164 182 4.4E-38 T 13-10-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722 COP00_09130 f227066cda9a694998d64405289414d4 291 SUPERFAMILY SSF52096 29 282 1.21E-79 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily COP00_09130 f227066cda9a694998d64405289414d4 291 Pfam PF01039 Carboxyl transferase domain 64 243 2.3E-17 T 13-10-2018 IPR034733 Acetyl-CoA carboxylase MetaCyc: PWY-4381|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6722|Reactome: R-HSA-196780 COP00_09130 f227066cda9a694998d64405289414d4 291 Gene3D G3DSA:3.90.226.10 29 283 1.2E-87 T 13-10-2018 COP00_04225 12170938c371916d95c2f4a970aaa2fa 446 SUPERFAMILY SSF51246 331 443 5.23E-39 T 13-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 COP00_04225 12170938c371916d95c2f4a970aaa2fa 446 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 322 1.1E-76 T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 COP00_04225 12170938c371916d95c2f4a970aaa2fa 446 Gene3D G3DSA:3.30.470.130 1 446 1.3E-192 T 13-10-2018 COP00_04225 12170938c371916d95c2f4a970aaa2fa 446 SUPERFAMILY SSF56059 83 351 1.77E-65 T 13-10-2018 COP00_04225 12170938c371916d95c2f4a970aaa2fa 446 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 COP00_04225 12170938c371916d95c2f4a970aaa2fa 446 Pfam PF00289 Biotin carboxylase, N-terminal domain 2 110 6.6E-45 T 13-10-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 COP00_04225 12170938c371916d95c2f4a970aaa2fa 446 Pfam PF02785 Biotin carboxylase C-terminal domain 336 441 1.1E-35 T 13-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 COP00_04225 12170938c371916d95c2f4a970aaa2fa 446 SMART SM00878 336 441 1.5E-51 T 13-10-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 COP00_04225 12170938c371916d95c2f4a970aaa2fa 446 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 153 167 - T 13-10-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 COP00_04225 12170938c371916d95c2f4a970aaa2fa 446 SUPERFAMILY SSF52440 2 113 1.29E-48 T 13-10-2018 IPR016185 Pre-ATP-grasp domain superfamily COP00_13080 ac20740323f5b9d45959d46bc9e0713b 143 Hamap MF_01185 Flagellar assembly factor FliW [fliW]. 17 141 26.16 T 13-10-2018 IPR003775 Flagellar assembly factor FliW GO:0044780 COP00_13080 ac20740323f5b9d45959d46bc9e0713b 143 Pfam PF02623 FliW protein 19 137 2.7E-40 T 13-10-2018 IPR003775 Flagellar assembly factor FliW GO:0044780 COP00_13080 ac20740323f5b9d45959d46bc9e0713b 143 Gene3D G3DSA:2.30.290.10 1 142 7.2E-55 T 13-10-2018 IPR024046 Flagellar assembly factor FliW domain superfamily COP00_13080 ac20740323f5b9d45959d46bc9e0713b 143 SUPERFAMILY SSF141457 1 139 2.48E-50 T 13-10-2018 IPR024046 Flagellar assembly factor FliW domain superfamily COP00_20240 15f9a841020bee41ecf8e2085c6cf19b 422 Gene3D G3DSA:3.30.470.20 189 324 5.1E-60 T 13-10-2018 COP00_20240 15f9a841020bee41ecf8e2085c6cf19b 422 Gene3D G3DSA:3.40.50.20 1 93 6.4E-35 T 13-10-2018 COP00_20240 15f9a841020bee41ecf8e2085c6cf19b 422 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 2 100 2.2E-32 T 13-10-2018 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 COP00_20240 15f9a841020bee41ecf8e2085c6cf19b 422 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 101 293 1.2E-85 T 13-10-2018 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 COP00_20240 15f9a841020bee41ecf8e2085c6cf19b 422 Gene3D G3DSA:3.90.600.10 325 422 5.6E-35 T 13-10-2018 IPR037123 Phosphoribosylglycinamide synthetase, C-domain superfamily GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 COP00_20240 15f9a841020bee41ecf8e2085c6cf19b 422 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 2 417 2.3E-174 T 13-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 COP00_20240 15f9a841020bee41ecf8e2085c6cf19b 422 SMART SM01209 101 293 4.5E-129 T 13-10-2018 COP00_20240 15f9a841020bee41ecf8e2085c6cf19b 422 Gene3D G3DSA:3.30.1490.20 119 188 5.7E-28 T 13-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 COP00_20240 15f9a841020bee41ecf8e2085c6cf19b 422 SUPERFAMILY SSF52440 2 101 1.04E-33 T 13-10-2018 IPR016185 Pre-ATP-grasp domain superfamily COP00_20240 15f9a841020bee41ecf8e2085c6cf19b 422 SUPERFAMILY SSF51246 324 417 6.8E-29 T 13-10-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 COP00_20240 15f9a841020bee41ecf8e2085c6cf19b 422 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 417 42.815 T 13-10-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 COP00_20240 15f9a841020bee41ecf8e2085c6cf19b 422 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 287 294 - T 13-10-2018 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 COP00_20240 15f9a841020bee41ecf8e2085c6cf19b 422 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 326 415 6.1E-29 T 13-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 COP00_20240 15f9a841020bee41ecf8e2085c6cf19b 422 SMART SM01210 325 417 1.7E-46 T 13-10-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 COP00_20240 15f9a841020bee41ecf8e2085c6cf19b 422 SUPERFAMILY SSF56059 102 322 9.55E-61 T 13-10-2018 COP00_08765 37ef701e126f47f883f382bde2f9b95b 104 Gene3D G3DSA:3.40.30.10 1 104 4.4E-37 T 13-10-2018 COP00_08765 37ef701e126f47f883f382bde2f9b95b 104 Pfam PF00085 Thioredoxin 3 103 7.2E-31 T 13-10-2018 IPR013766 Thioredoxin domain GO:0045454 COP00_08765 37ef701e126f47f883f382bde2f9b95b 104 SUPERFAMILY SSF52833 3 104 3.02E-37 T 13-10-2018 IPR036249 Thioredoxin-like superfamily COP00_08765 37ef701e126f47f883f382bde2f9b95b 104 PIRSF PIRSF000077 1 104 9.6E-44 T 13-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 COP00_08765 37ef701e126f47f883f382bde2f9b95b 104 TIGRFAM TIGR01068 thioredoxin: thioredoxin 8 103 7.5E-40 T 13-10-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 COP00_08765 37ef701e126f47f883f382bde2f9b95b 104 PRINTS PR00421 Thioredoxin family signature 20 28 1.3E-8 T 13-10-2018 COP00_08765 37ef701e126f47f883f382bde2f9b95b 104 PRINTS PR00421 Thioredoxin family signature 68 79 1.3E-8 T 13-10-2018 COP00_08765 37ef701e126f47f883f382bde2f9b95b 104 PRINTS PR00421 Thioredoxin family signature 28 37 1.3E-8 T 13-10-2018 COP00_08765 37ef701e126f47f883f382bde2f9b95b 104 ProSitePatterns PS00194 Thioredoxin family active site. 21 39 - T 13-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 COP00_22100 7a560449da56765999ba023b21b8db7f 314 Gene3D G3DSA:1.10.3210.10 121 293 2.3E-13 T 13-10-2018 COP00_22100 7a560449da56765999ba023b21b8db7f 314 SMART SM00471 156 288 7.4E-7 T 13-10-2018 IPR003607 HD/PDEase domain COP00_22100 7a560449da56765999ba023b21b8db7f 314 Pfam PF01966 HD domain 161 278 1.5E-12 T 13-10-2018 IPR006674 HD domain COP00_22100 7a560449da56765999ba023b21b8db7f 314 SUPERFAMILY SSF109604 148 279 7.85E-16 T 13-10-2018 COP00_22100 7a560449da56765999ba023b21b8db7f 314 Hamap MF_01427 3'-5' exoribonuclease YhaM [yhaM]. 1 313 64.899 T 13-10-2018 IPR020873 3'-5' exoribonuclease YhaM GO:0000175 COP00_22100 7a560449da56765999ba023b21b8db7f 314 Gene3D G3DSA:2.40.50.140 25 100 1.4E-6 T 13-10-2018 COP00_23160 9338021fe4d8f076801d4cb0a709e671 257 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 COP00_23160 9338021fe4d8f076801d4cb0a709e671 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 3.4E-13 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_23160 9338021fe4d8f076801d4cb0a709e671 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 3.4E-13 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_23160 9338021fe4d8f076801d4cb0a709e671 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 132 140 3.4E-13 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_23160 9338021fe4d8f076801d4cb0a709e671 257 Gene3D G3DSA:3.40.50.720 1 257 3.6E-87 T 13-10-2018 COP00_23160 9338021fe4d8f076801d4cb0a709e671 257 TIGRFAM TIGR02415 23BDH: acetoin reductases 3 257 6.2E-112 T 13-10-2018 IPR014007 Acetoin reductase GO:0019152|GO:0045150|GO:0055114 KEGG: 00650+1.1.1.304|MetaCyc: PWY-6389 COP00_23160 9338021fe4d8f076801d4cb0a709e671 257 SUPERFAMILY SSF51735 3 255 8.61E-79 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily COP00_23160 9338021fe4d8f076801d4cb0a709e671 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 4.7E-40 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_23160 9338021fe4d8f076801d4cb0a709e671 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 218 238 4.7E-40 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_23160 9338021fe4d8f076801d4cb0a709e671 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 4.7E-40 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_23160 9338021fe4d8f076801d4cb0a709e671 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 4.7E-40 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_23160 9338021fe4d8f076801d4cb0a709e671 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 4.7E-40 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_23160 9338021fe4d8f076801d4cb0a709e671 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 126 142 4.7E-40 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_23160 9338021fe4d8f076801d4cb0a709e671 257 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 9 254 4.8E-61 T 13-10-2018 COP00_05505 ac057cea49ec80ad5b02cb9b8820f38e 56 PIRSF PIRSF036698 1 56 1.6E-35 T 13-10-2018 IPR012190 Uncharacterised conserved protein UCP036698, YpmA COP00_05505 ac057cea49ec80ad5b02cb9b8820f38e 56 Pfam PF14084 Protein of unknown function (DUF4264) 4 56 6.0E-25 T 13-10-2018 IPR012190 Uncharacterised conserved protein UCP036698, YpmA COP00_22640 d0a01139158db001e14c0dd7d57e65ab 145 SUPERFAMILY SSF55729 9 131 2.96E-18 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase COP00_22640 d0a01139158db001e14c0dd7d57e65ab 145 Pfam PF00583 Acetyltransferase (GNAT) family 37 123 5.5E-10 T 13-10-2018 IPR000182 GNAT domain COP00_22640 d0a01139158db001e14c0dd7d57e65ab 145 Gene3D G3DSA:3.40.630.30 1 145 1.2E-36 T 13-10-2018 COP00_07090 5de0573cdf14f48548638eb21ec4780f 286 Pfam PF00950 ABC 3 transport family 8 269 2.5E-62 T 13-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 COP00_07090 5de0573cdf14f48548638eb21ec4780f 286 SUPERFAMILY SSF81345 4 268 3.14E-37 T 13-10-2018 IPR037294 ABC transporter, BtuC-like COP00_07090 5de0573cdf14f48548638eb21ec4780f 286 Gene3D G3DSA:1.10.3470.10 98 275 3.6E-11 T 13-10-2018 IPR037294 ABC transporter, BtuC-like COP00_01370 44cfaa641d724f3fc251317dd3f12fc9 438 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 145 354 1.1E-76 T 13-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 COP00_01370 44cfaa641d724f3fc251317dd3f12fc9 438 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 22 88 1.3E-5 T 13-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 COP00_01370 44cfaa641d724f3fc251317dd3f12fc9 438 TIGRFAM TIGR03497 FliI_clade2: flagellar protein export ATPase FliI 20 433 3.5E-206 T 13-10-2018 IPR022425 Flagellar export ATPase FliI, clade 2 GO:0016887|GO:0044780|GO:0071973 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 COP00_01370 44cfaa641d724f3fc251317dd3f12fc9 438 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 11 434 4.8E-204 T 13-10-2018 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 COP00_01370 44cfaa641d724f3fc251317dd3f12fc9 438 SMART SM00382 157 338 1.2E-8 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_01370 44cfaa641d724f3fc251317dd3f12fc9 438 Gene3D G3DSA:3.40.50.12240 11 436 3.4E-154 T 13-10-2018 COP00_01370 44cfaa641d724f3fc251317dd3f12fc9 438 SUPERFAMILY SSF52540 92 359 4.28E-96 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_01370 44cfaa641d724f3fc251317dd3f12fc9 438 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 345 354 - T 13-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 COP00_04360 ed02f4bf8654e4ff59bf84f9c26900f0 575 Pfam PF00005 ABC transporter 350 496 1.6E-32 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 COP00_04360 ed02f4bf8654e4ff59bf84f9c26900f0 575 Pfam PF00664 ABC transporter transmembrane region 16 285 1.4E-46 T 13-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 COP00_04360 ed02f4bf8654e4ff59bf84f9c26900f0 575 ProSitePatterns PS00211 ABC transporters family signature. 470 484 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 COP00_04360 ed02f4bf8654e4ff59bf84f9c26900f0 575 Gene3D G3DSA:1.20.1560.10 1 314 1.9E-89 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 COP00_04360 ed02f4bf8654e4ff59bf84f9c26900f0 575 SUPERFAMILY SSF90123 4 318 7.72E-76 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 COP00_04360 ed02f4bf8654e4ff59bf84f9c26900f0 575 Gene3D G3DSA:3.40.50.300 325 575 1.7E-84 T 13-10-2018 COP00_04360 ed02f4bf8654e4ff59bf84f9c26900f0 575 SMART SM00382 358 544 2.3E-13 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_04360 ed02f4bf8654e4ff59bf84f9c26900f0 575 SUPERFAMILY SSF52540 325 568 1.66E-83 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_09175 b57cca31e2aabbda66b20146be901237 183 SUPERFAMILY SSF46785 4 181 1.43E-38 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_09175 b57cca31e2aabbda66b20146be901237 183 Gene3D G3DSA:1.10.10.10 3 88 2.1E-25 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_09175 b57cca31e2aabbda66b20146be901237 183 Pfam PF03551 Transcriptional regulator PadR-like family 8 82 8.7E-17 T 13-10-2018 IPR005149 Transcription regulator PadR, N-terminal COP00_09175 b57cca31e2aabbda66b20146be901237 183 Pfam PF10400 Virulence activator alpha C-term 94 180 1.1E-16 T 13-10-2018 IPR018309 Transcription regulator PadR, C-terminal COP00_09050 90efae083981ddc3a46c03a691a0e6d7 495 Pfam PF00544 Pectate lyase 229 416 1.1E-43 T 13-10-2018 IPR002022 Pectate lyase COP00_09050 90efae083981ddc3a46c03a691a0e6d7 495 Gene3D G3DSA:2.80.10.50 39 172 1.1E-12 T 13-10-2018 COP00_09050 90efae083981ddc3a46c03a691a0e6d7 495 SMART SM00656 198 422 9.6E-52 T 13-10-2018 IPR002022 Pectate lyase COP00_09050 90efae083981ddc3a46c03a691a0e6d7 495 SUPERFAMILY SSF51126 177 481 2.79E-58 T 13-10-2018 IPR011050 Pectin lyase fold/virulence factor COP00_09050 90efae083981ddc3a46c03a691a0e6d7 495 SUPERFAMILY SSF50370 47 173 6.55E-14 T 13-10-2018 IPR035992 Ricin B-like lectins COP00_09050 90efae083981ddc3a46c03a691a0e6d7 495 Gene3D G3DSA:2.160.20.10 177 487 1.3E-57 T 13-10-2018 IPR012334 Pectin lyase fold COP00_09050 90efae083981ddc3a46c03a691a0e6d7 495 Pfam PF14200 Ricin-type beta-trefoil lectin domain-like 72 154 4.9E-6 T 13-10-2018 IPR000772 Ricin B, lectin domain COP00_06365 ed1595bb06a94140e824bf1081ff8dd0 339 Gene3D G3DSA:3.20.20.70 2 339 4.3E-126 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 COP00_06365 ed1595bb06a94140e824bf1081ff8dd0 339 Hamap MF_01614 NADPH dehydrogenase [namA]. 3 339 67.739 T 13-10-2018 IPR023663 NADPH dehydrogenase GO:0003959|GO:0055114 COP00_06365 ed1595bb06a94140e824bf1081ff8dd0 339 SUPERFAMILY SSF51395 5 335 4.58E-112 T 13-10-2018 COP00_06365 ed1595bb06a94140e824bf1081ff8dd0 339 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 5 327 9.4E-93 T 13-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 COP00_23340 0ab9a8dd01fc667ebcf24ae010d6cfde 805 Gene3D G3DSA:3.40.50.300 490 674 4.6E-7 T 13-10-2018 COP00_23340 0ab9a8dd01fc667ebcf24ae010d6cfde 805 TIGRFAM TIGR01613 primase_Cterm: phage/plasmid primase, P4 family, C-terminal domain 435 744 1.4E-103 T 13-10-2018 IPR006500 DNA primase, phage/plasmid COP00_23340 0ab9a8dd01fc667ebcf24ae010d6cfde 805 Pfam PF08706 D5 N terminal like 337 485 2.6E-34 T 13-10-2018 IPR014818 Bacteriophage/plasmid primase, P4, C-terminal COP00_23340 0ab9a8dd01fc667ebcf24ae010d6cfde 805 SUPERFAMILY SSF52540 495 671 3.72E-9 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_23340 0ab9a8dd01fc667ebcf24ae010d6cfde 805 SMART SM00885 337 486 1.8E-47 T 13-10-2018 IPR014818 Bacteriophage/plasmid primase, P4, C-terminal COP00_01560 38ac6407e8eaa9b73639f8c743d2d15d 157 SUPERFAMILY SSF74942 85 156 1.11E-21 T 13-10-2018 IPR036847 Ribosome maturation factor RimP, C-terminal domain superfamily COP00_01560 38ac6407e8eaa9b73639f8c743d2d15d 157 Gene3D G3DSA:3.30.300.70 1 81 2.4E-30 T 13-10-2018 IPR035956 RimP, N-terminal domain superfamily COP00_01560 38ac6407e8eaa9b73639f8c743d2d15d 157 Pfam PF17384 RimP C-terminal SH3 domain 87 156 1.2E-22 T 13-10-2018 IPR028998 Ribosome maturation factor RimP, C-terminal COP00_01560 38ac6407e8eaa9b73639f8c743d2d15d 157 Pfam PF02576 RimP N-terminal domain 12 84 2.1E-30 T 13-10-2018 IPR028989 Ribosome maturation factor RimP, N-terminal COP00_01560 38ac6407e8eaa9b73639f8c743d2d15d 157 SUPERFAMILY SSF75420 2 84 9.15E-27 T 13-10-2018 IPR035956 RimP, N-terminal domain superfamily COP00_01560 38ac6407e8eaa9b73639f8c743d2d15d 157 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 7 156 25.541 T 13-10-2018 IPR003728 Ribosome maturation factor RimP GO:0042274 COP00_01560 38ac6407e8eaa9b73639f8c743d2d15d 157 Gene3D G3DSA:2.30.30.180 88 154 1.2E-25 T 13-10-2018 COP00_03890 56ce9bdbb6fbe59459b88f32539a90ac 115 SUPERFAMILY SSF46785 8 100 3.79E-25 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_03890 56ce9bdbb6fbe59459b88f32539a90ac 115 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 47 62 8.6E-20 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 COP00_03890 56ce9bdbb6fbe59459b88f32539a90ac 115 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 15 30 8.6E-20 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 COP00_03890 56ce9bdbb6fbe59459b88f32539a90ac 115 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 62 77 8.6E-20 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 COP00_03890 56ce9bdbb6fbe59459b88f32539a90ac 115 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 34 45 8.6E-20 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 COP00_03890 56ce9bdbb6fbe59459b88f32539a90ac 115 SMART SM00418 13 92 4.5E-27 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 COP00_03890 56ce9bdbb6fbe59459b88f32539a90ac 115 Gene3D G3DSA:1.10.10.10 4 108 2.8E-28 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_03890 56ce9bdbb6fbe59459b88f32539a90ac 115 Pfam PF01022 Bacterial regulatory protein, arsR family 20 65 4.1E-13 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 COP00_15070 428697f0720664538e353235031d9be2 603 Gene3D G3DSA:2.70.70.10 446 602 2.3E-51 T 13-10-2018 IPR011055 Duplicated hybrid motif COP00_15070 428697f0720664538e353235031d9be2 603 Pfam PF00367 phosphotransferase system, EIIB 8 41 1.1E-13 T 13-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 COP00_15070 428697f0720664538e353235031d9be2 603 TIGRFAM TIGR01995 PTS-II-ABC-beta: PTS system, beta-glucoside-specific IIABC component 3 602 5.7E-233 T 13-10-2018 IPR011297 Phosphotransferase system, beta-glucoside-specific IIABC component GO:0005886|GO:0008982|GO:0009401 COP00_15070 428697f0720664538e353235031d9be2 603 Pfam PF02378 Phosphotransferase system, EIIC 108 385 1.7E-32 T 13-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 COP00_15070 428697f0720664538e353235031d9be2 603 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 19 36 - T 13-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 COP00_15070 428697f0720664538e353235031d9be2 603 SUPERFAMILY SSF51261 451 601 1.06E-49 T 13-10-2018 IPR011055 Duplicated hybrid motif COP00_15070 428697f0720664538e353235031d9be2 603 SUPERFAMILY SSF55604 6 79 4.58E-22 T 13-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 COP00_15070 428697f0720664538e353235031d9be2 603 Gene3D G3DSA:3.30.1360.60 1 77 2.7E-29 T 13-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 COP00_15070 428697f0720664538e353235031d9be2 603 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 457 581 1.9E-46 T 13-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 COP00_15070 428697f0720664538e353235031d9be2 603 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 458 578 5.0E-41 T 13-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 COP00_22660 13d405c88d27a6709010f96c77ca7b2c 282 Pfam PF13509 S1 domain 4 61 5.3E-19 T 13-10-2018 IPR039566 Conserved virulence factor B, S1 domain COP00_22660 13d405c88d27a6709010f96c77ca7b2c 282 Gene3D G3DSA:2.40.50.140 151 218 5.2E-20 T 13-10-2018 COP00_22660 13d405c88d27a6709010f96c77ca7b2c 282 Gene3D G3DSA:1.10.10.10 220 279 1.4E-25 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_22660 13d405c88d27a6709010f96c77ca7b2c 282 Gene3D G3DSA:2.40.50.140 71 148 1.3E-25 T 13-10-2018 COP00_22660 13d405c88d27a6709010f96c77ca7b2c 282 PIRSF PIRSF012524 1 282 6.3E-117 T 13-10-2018 IPR014464 Conserved virulence factor B COP00_22660 13d405c88d27a6709010f96c77ca7b2c 282 SUPERFAMILY SSF50249 146 210 2.57E-5 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold COP00_22660 13d405c88d27a6709010f96c77ca7b2c 282 SMART SM00316 149 211 2.3E-4 T 13-10-2018 IPR022967 RNA-binding domain, S1 COP00_22660 13d405c88d27a6709010f96c77ca7b2c 282 SMART SM00316 2 62 0.51 T 13-10-2018 IPR022967 RNA-binding domain, S1 COP00_11195 acc70ae41469caf0ff1dbfd9e97e4d9f 324 SUPERFAMILY SSF51126 13 317 3.98E-75 T 13-10-2018 IPR011050 Pectin lyase fold/virulence factor COP00_11195 acc70ae41469caf0ff1dbfd9e97e4d9f 324 ProSitePatterns PS00800 Pectinesterase signature 1. 42 61 - T 13-10-2018 IPR018040 Pectinesterase, Tyr active site KEGG: 00040+3.1.1.11|MetaCyc: PWY-1081|MetaCyc: PWY-7246|MetaCyc: PWY-7248 COP00_11195 acc70ae41469caf0ff1dbfd9e97e4d9f 324 Pfam PF01095 Pectinesterase 18 316 3.2E-53 T 13-10-2018 IPR000070 Pectinesterase, catalytic GO:0005618|GO:0030599|GO:0042545 KEGG: 00040+3.1.1.11|MetaCyc: PWY-1081|MetaCyc: PWY-7246|MetaCyc: PWY-7248 COP00_11195 acc70ae41469caf0ff1dbfd9e97e4d9f 324 ProSitePatterns PS00503 Pectinesterase signature 2. 172 181 - T 13-10-2018 IPR033131 Pectinesterase, Asp active site KEGG: 00040+3.1.1.11|MetaCyc: PWY-1081|MetaCyc: PWY-7246|MetaCyc: PWY-7248 COP00_11195 acc70ae41469caf0ff1dbfd9e97e4d9f 324 Gene3D G3DSA:2.160.20.10 14 323 2.0E-111 T 13-10-2018 IPR012334 Pectin lyase fold COP00_18350 402c0438b0f7a5bde3b7d0e56b3d63b4 233 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 24 121 3.8E-28 T 13-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 COP00_18350 402c0438b0f7a5bde3b7d0e56b3d63b4 233 SUPERFAMILY SSF161098 24 228 6.67E-45 T 13-10-2018 IPR035906 MetI-like superfamily COP00_18350 402c0438b0f7a5bde3b7d0e56b3d63b4 233 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 45 228 7.0E-24 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 COP00_18350 402c0438b0f7a5bde3b7d0e56b3d63b4 233 Gene3D G3DSA:1.10.3720.10 19 230 6.7E-52 T 13-10-2018 IPR035906 MetI-like superfamily COP00_19860 cce1dc157d349c852d2bea93c538d41d 143 Pfam PF02556 Preprotein translocase subunit SecB 19 133 9.9E-6 T 13-10-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 COP00_19860 cce1dc157d349c852d2bea93c538d41d 143 SUPERFAMILY SSF54611 21 137 1.11E-14 T 13-10-2018 IPR035958 SecB-like superfamily COP00_19860 cce1dc157d349c852d2bea93c538d41d 143 Gene3D G3DSA:3.10.420.10 9 142 4.3E-6 T 13-10-2018 IPR035958 SecB-like superfamily COP00_22030 a42d0dbc746f4290140702c7b64eb1d6 117 Pfam PF06133 Control of competence regulator ComK, YlbF/YmcA 6 108 5.2E-24 T 13-10-2018 IPR010368 Control of competence regulator ComK, YlbF/YmcA COP00_22030 a42d0dbc746f4290140702c7b64eb1d6 117 Hamap MF_01526 UPF0342 protein . 2 113 18.959 T 13-10-2018 IPR010368 Control of competence regulator ComK, YlbF/YmcA COP00_22030 a42d0dbc746f4290140702c7b64eb1d6 117 Gene3D G3DSA:1.20.1500.10 2 113 1.7E-38 T 13-10-2018 IPR023378 YheA/YmcA-like domain superfamily COP00_22030 a42d0dbc746f4290140702c7b64eb1d6 117 SUPERFAMILY SSF158622 3 114 6.02E-38 T 13-10-2018 IPR023378 YheA/YmcA-like domain superfamily COP00_12975 e4bdda5bd27bd98fc0a87b4661db8764 77 Pfam PF09964 Uncharacterized protein conserved in bacteria (DUF2198) 4 74 3.9E-32 T 13-10-2018 IPR019242 Protein of unknown function DUF2198 COP00_07300 65b88b192c067f793a598e9800ec5544 255 PIRSF PIRSF015601 1 251 4.2E-64 T 13-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 COP00_07300 65b88b192c067f793a598e9800ec5544 255 SUPERFAMILY SSF75217 74 251 3.31E-56 T 13-10-2018 IPR029028 Alpha/beta knot methyltransferases COP00_07300 65b88b192c067f793a598e9800ec5544 255 SUPERFAMILY SSF88697 2 71 4.72E-16 T 13-10-2018 IPR015947 PUA-like superfamily COP00_07300 65b88b192c067f793a598e9800ec5544 255 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 4 251 8.8E-80 T 13-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 COP00_07300 65b88b192c067f793a598e9800ec5544 255 Pfam PF04452 RNA methyltransferase 20 247 5.5E-77 T 13-10-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 COP00_07300 65b88b192c067f793a598e9800ec5544 255 Gene3D G3DSA:3.40.1280.10 1 255 9.2E-100 T 13-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal COP00_15920 a5a27887375f49e4dbf714af77e0d965 266 Pfam PF02096 60Kd inner membrane protein 61 243 2.5E-61 T 13-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 COP00_15920 a5a27887375f49e4dbf714af77e0d965 266 Hamap MF_01811 Membrane protein insertase YidC [yidC]. 4 247 32.98 T 13-10-2018 IPR023060 Membrane insertase YidC/YidC1/YidC2, Firmicutes GO:0016021|GO:0032977 COP00_15920 a5a27887375f49e4dbf714af77e0d965 266 PRINTS PR00701 60kDa inner membrane protein signature 210 233 2.9E-15 T 13-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 COP00_15920 a5a27887375f49e4dbf714af77e0d965 266 PRINTS PR00701 60kDa inner membrane protein signature 126 149 2.9E-15 T 13-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 COP00_15920 a5a27887375f49e4dbf714af77e0d965 266 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 60 243 5.6E-68 T 13-10-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_15920 a5a27887375f49e4dbf714af77e0d965 266 PRINTS PR01900 YidC translocation/secretion protein signature 177 192 3.9E-6 T 13-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 COP00_15920 a5a27887375f49e4dbf714af77e0d965 266 PRINTS PR01900 YidC translocation/secretion protein signature 199 223 3.9E-6 T 13-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 COP00_14770 0d2e2f79f721258e0ae3a579a2254ac3 465 Pfam PF03553 Na+/H+ antiporter family 159 451 6.7E-68 T 13-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 COP00_14770 0d2e2f79f721258e0ae3a579a2254ac3 465 TIGRFAM TIGR00931 antiport_nhaC: Na+/H+ antiporter NhaC 5 457 2.5E-202 T 13-10-2018 IPR004770 Na+/H+ antiporter NhaC GO:0015297|GO:0016021 COP00_11325 adba9cc34b0dc527ef9302132bb31152 483 SUPERFAMILY SSF103473 8 465 3.66E-68 T 13-10-2018 IPR036259 MFS transporter superfamily COP00_11325 adba9cc34b0dc527ef9302132bb31152 483 Gene3D G3DSA:1.20.1250.20 258 468 1.3E-23 T 13-10-2018 COP00_11325 adba9cc34b0dc527ef9302132bb31152 483 PRINTS PR01036 Tetracycline resistance protein TetB signature 336 356 8.4E-13 T 13-10-2018 COP00_11325 adba9cc34b0dc527ef9302132bb31152 483 PRINTS PR01036 Tetracycline resistance protein TetB signature 16 40 8.4E-13 T 13-10-2018 COP00_11325 adba9cc34b0dc527ef9302132bb31152 483 PRINTS PR01036 Tetracycline resistance protein TetB signature 301 325 8.4E-13 T 13-10-2018 COP00_11325 adba9cc34b0dc527ef9302132bb31152 483 PRINTS PR01036 Tetracycline resistance protein TetB signature 107 127 8.4E-13 T 13-10-2018 COP00_11325 adba9cc34b0dc527ef9302132bb31152 483 PRINTS PR01036 Tetracycline resistance protein TetB signature 137 161 8.4E-13 T 13-10-2018 COP00_11325 adba9cc34b0dc527ef9302132bb31152 483 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 14 419 9.6E-117 T 13-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 COP00_11325 adba9cc34b0dc527ef9302132bb31152 483 Gene3D G3DSA:1.20.1720.10 13 244 1.5E-41 T 13-10-2018 COP00_11325 adba9cc34b0dc527ef9302132bb31152 483 Pfam PF07690 Major Facilitator Superfamily 18 408 3.7E-54 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 COP00_00850 2663bb470941ed3bef4e67b585b27a69 366 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 322 346 - T 13-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 COP00_00850 2663bb470941ed3bef4e67b585b27a69 366 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 9 363 6.7E-134 T 13-10-2018 IPR013437 Probable peptidoglycan glycosyltransferase FtsW GO:0009252|GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 COP00_00850 2663bb470941ed3bef4e67b585b27a69 366 TIGRFAM TIGR02615 spoVE: stage V sporulation protein E 9 362 2.6E-186 T 13-10-2018 IPR013438 Sporulation stage V, protein E COP00_00850 2663bb470941ed3bef4e67b585b27a69 366 Pfam PF01098 Cell cycle protein 12 365 2.7E-130 T 13-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 COP00_11950 9aabb4f1dc030cde69ee6524e8ebe2b7 210 Pfam PF01914 MarC family integral membrane protein 2 205 2.5E-69 T 13-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 COP00_11950 9aabb4f1dc030cde69ee6524e8ebe2b7 210 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 2 201 6.7E-76 T 13-10-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 COP00_10570 4484d9b93aefe3b38f8677f7ad67bd9e 176 SMART SM00471 19 148 6.3E-7 T 13-10-2018 IPR003607 HD/PDEase domain COP00_10570 4484d9b93aefe3b38f8677f7ad67bd9e 176 Pfam PF01966 HD domain 25 137 9.1E-16 T 13-10-2018 IPR006674 HD domain COP00_10570 4484d9b93aefe3b38f8677f7ad67bd9e 176 TIGRFAM TIGR00277 HDIG: HDIG domain 23 91 3.2E-9 T 13-10-2018 IPR006675 HDIG domain COP00_10570 4484d9b93aefe3b38f8677f7ad67bd9e 176 SUPERFAMILY SSF109604 16 137 8.53E-23 T 13-10-2018 COP00_10570 4484d9b93aefe3b38f8677f7ad67bd9e 176 Gene3D G3DSA:1.10.3210.10 7 168 1.3E-19 T 13-10-2018 COP00_23100 347a7b7ed6ce3434845850ce933e4f7a 392 Gene3D G3DSA:3.90.1150.10 251 390 1.2E-47 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 COP00_23100 347a7b7ed6ce3434845850ce933e4f7a 392 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 192 206 - T 13-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 COP00_23100 347a7b7ed6ce3434845850ce933e4f7a 392 SUPERFAMILY SSF53383 23 383 1.5E-110 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase COP00_23100 347a7b7ed6ce3434845850ce933e4f7a 392 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 9 382 2.1E-149 T 13-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 COP00_23100 347a7b7ed6ce3434845850ce933e4f7a 392 PIRSF PIRSF001434 1 385 5.8E-146 T 13-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 COP00_23100 347a7b7ed6ce3434845850ce933e4f7a 392 Gene3D G3DSA:3.40.640.10 7 250 8.2E-89 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 COP00_14850 1fefa80d02238a0a8749c92896ba4629 450 PIRSF PIRSF005348 12 450 7.0E-158 T 13-10-2018 IPR004679 2-hydroxycarboxylate transporter GO:0008514|GO:0015711|GO:0016021 COP00_14850 1fefa80d02238a0a8749c92896ba4629 450 Pfam PF03390 2-hydroxycarboxylate transporter family 31 443 1.9E-147 T 13-10-2018 IPR004679 2-hydroxycarboxylate transporter GO:0008514|GO:0015711|GO:0016021 COP00_13955 0a88aef8a1a2448d6ce8c8f8a6047b75 427 Gene3D G3DSA:3.40.50.300 132 414 3.9E-123 T 13-10-2018 COP00_13955 0a88aef8a1a2448d6ce8c8f8a6047b75 427 SMART SM00382 169 354 3.2E-7 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_13955 0a88aef8a1a2448d6ce8c8f8a6047b75 427 Pfam PF07497 Rho termination factor, RNA-binding domain 54 127 3.3E-31 T 13-10-2018 IPR011113 Rho termination factor, RNA-binding domain GO:0003723|GO:0006353 COP00_13955 0a88aef8a1a2448d6ce8c8f8a6047b75 427 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 158 362 1.9E-18 T 13-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 COP00_13955 0a88aef8a1a2448d6ce8c8f8a6047b75 427 SUPERFAMILY SSF68912 5 49 2.55E-10 T 13-10-2018 IPR036269 Rho termination factor, N-terminal domain superfamily COP00_13955 0a88aef8a1a2448d6ce8c8f8a6047b75 427 SMART SM00357 55 120 7.8E-20 T 13-10-2018 IPR011129 Cold shock domain GO:0003676 COP00_13955 0a88aef8a1a2448d6ce8c8f8a6047b75 427 TIGRFAM TIGR00767 rho: transcription termination factor Rho 5 413 2.4E-207 T 13-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 COP00_13955 0a88aef8a1a2448d6ce8c8f8a6047b75 427 Gene3D G3DSA:1.10.720.10 1 48 5.6E-22 T 13-10-2018 COP00_13955 0a88aef8a1a2448d6ce8c8f8a6047b75 427 Pfam PF07498 Rho termination factor, N-terminal domain 9 49 8.4E-15 T 13-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 COP00_13955 0a88aef8a1a2448d6ce8c8f8a6047b75 427 SMART SM00959 8 50 2.7E-14 T 13-10-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 COP00_13955 0a88aef8a1a2448d6ce8c8f8a6047b75 427 Gene3D G3DSA:2.40.50.140 50 125 9.2E-29 T 13-10-2018 COP00_13955 0a88aef8a1a2448d6ce8c8f8a6047b75 427 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 419 223.1 T 13-10-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 COP00_13955 0a88aef8a1a2448d6ce8c8f8a6047b75 427 SUPERFAMILY SSF50249 52 127 4.57E-24 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold COP00_13955 0a88aef8a1a2448d6ce8c8f8a6047b75 427 SUPERFAMILY SSF52540 92 370 6.71E-67 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_01020 646fb86c93ea1e4b925f61bcec043897 311 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 38 57 - T 13-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 COP00_01020 646fb86c93ea1e4b925f61bcec043897 311 SUPERFAMILY SSF51395 2 300 1.9E-91 T 13-10-2018 COP00_01020 646fb86c93ea1e4b925f61bcec043897 311 Pfam PF01180 Dihydroorotate dehydrogenase 1 284 2.7E-98 T 13-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 COP00_01020 646fb86c93ea1e4b925f61bcec043897 311 Hamap MF_00224 Dihydroorotate dehydrogenase [pyrD]. 2 299 42.826 T 13-10-2018 IPR024920 Dihydroorotate dehydrogenase, class 1 GO:0004152|GO:0005737|GO:0006221 COP00_01020 646fb86c93ea1e4b925f61bcec043897 311 TIGRFAM TIGR01037 pyrD_sub1_fam: dihydroorotate dehydrogenase family protein 2 300 8.1E-137 T 13-10-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 COP00_01020 646fb86c93ea1e4b925f61bcec043897 311 PIRSF PIRSF000164 1 301 7.7E-91 T 13-10-2018 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 COP00_01020 646fb86c93ea1e4b925f61bcec043897 311 Gene3D G3DSA:3.20.20.70 1 302 2.4E-104 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 COP00_01020 646fb86c93ea1e4b925f61bcec043897 311 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 237 257 - T 13-10-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 COP00_05885 6f7faa0668887bc5fe301e8737159249 377 Gene3D G3DSA:2.120.10.30 81 321 7.4E-14 T 13-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like COP00_05885 6f7faa0668887bc5fe301e8737159249 377 SUPERFAMILY SSF69304 104 343 6.93E-20 T 13-10-2018 COP00_20565 82b5985963178ef73791e1c0b2debeb0 339 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 231 320 4.1E-15 T 13-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 COP00_20565 82b5985963178ef73791e1c0b2debeb0 339 SUPERFAMILY SSF102114 14 321 1.37E-69 T 13-10-2018 COP00_20565 82b5985963178ef73791e1c0b2debeb0 339 Hamap MF_01694 Biotin synthase [bioB]. 15 322 40.954 T 13-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 COP00_20565 82b5985963178ef73791e1c0b2debeb0 339 SMART SM00729 55 263 3.1E-33 T 13-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 COP00_20565 82b5985963178ef73791e1c0b2debeb0 339 Gene3D G3DSA:3.20.20.70 16 323 5.9E-107 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 COP00_20565 82b5985963178ef73791e1c0b2debeb0 339 SMART SM00876 231 321 8.8E-35 T 13-10-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 COP00_20565 82b5985963178ef73791e1c0b2debeb0 339 PIRSF PIRSF001619 1 328 7.6E-127 T 13-10-2018 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 COP00_20565 82b5985963178ef73791e1c0b2debeb0 339 TIGRFAM TIGR00433 bioB: biotin synthase 27 320 1.7E-119 T 13-10-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 COP00_20565 82b5985963178ef73791e1c0b2debeb0 339 Pfam PF04055 Radical SAM superfamily 65 220 1.3E-15 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 COP00_03960 6409ce898cee47024f694ec6d13c86a7 484 SUPERFAMILY SSF53720 6 483 5.63E-146 T 13-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 COP00_03960 6409ce898cee47024f694ec6d13c86a7 484 TIGRFAM TIGR01722 MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 10 483 4.8E-177 T 13-10-2018 IPR010061 Methylmalonate-semialdehyde dehydrogenase GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00640+1.2.1.27|MetaCyc: PWY-5642|Reactome: R-HSA-70895 COP00_03960 6409ce898cee47024f694ec6d13c86a7 484 Hamap MF_01670 Malonate-semialdehyde dehydrogenase [iolA]. 3 483 68.935 T 13-10-2018 IPR023510 Methylmalonate-semialdehyde dehydrogenase, Gram-positive bacteria GO:0004491|GO:0055114 KEGG: 00280+1.2.1.27|KEGG: 00640+1.2.1.27|MetaCyc: PWY-5642 COP00_03960 6409ce898cee47024f694ec6d13c86a7 484 Gene3D G3DSA:3.40.605.10 25 460 5.3E-148 T 13-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 COP00_03960 6409ce898cee47024f694ec6d13c86a7 484 Gene3D G3DSA:3.40.309.10 254 452 5.3E-148 T 13-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 COP00_03960 6409ce898cee47024f694ec6d13c86a7 484 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 279 290 - T 13-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 COP00_03960 6409ce898cee47024f694ec6d13c86a7 484 Pfam PF00171 Aldehyde dehydrogenase family 17 479 4.6E-147 T 13-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 COP00_18475 82959c8f6abc9cf98692dbab74fefa07 393 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 365 381 6.4E-7 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 COP00_18475 82959c8f6abc9cf98692dbab74fefa07 393 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 350 365 6.4E-7 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 COP00_18475 82959c8f6abc9cf98692dbab74fefa07 393 Gene3D G3DSA:1.10.10.2730 336 382 8.2E-20 T 13-10-2018 COP00_18475 82959c8f6abc9cf98692dbab74fefa07 393 Gene3D G3DSA:1.10.10.60 278 335 5.6E-13 T 13-10-2018 COP00_18475 82959c8f6abc9cf98692dbab74fefa07 393 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 335 377 - T 13-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 COP00_18475 82959c8f6abc9cf98692dbab74fefa07 393 Gene3D G3DSA:3.40.50.12740 6 173 2.0E-34 T 13-10-2018 COP00_18475 82959c8f6abc9cf98692dbab74fefa07 393 SUPERFAMILY SSF52172 4 145 8.82E-34 T 13-10-2018 IPR011006 CheY-like superfamily COP00_18475 82959c8f6abc9cf98692dbab74fefa07 393 SMART SM00342 298 381 6.5E-29 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 COP00_18475 82959c8f6abc9cf98692dbab74fefa07 393 SUPERFAMILY SSF46689 334 382 4.48E-14 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 COP00_18475 82959c8f6abc9cf98692dbab74fefa07 393 SMART SM00448 5 119 4.0E-28 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 COP00_18475 82959c8f6abc9cf98692dbab74fefa07 393 Pfam PF12833 Helix-turn-helix domain 305 382 6.5E-22 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 COP00_18475 82959c8f6abc9cf98692dbab74fefa07 393 Pfam PF00072 Response regulator receiver domain 7 119 1.3E-25 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 COP00_08410 c73078e1c058988e46d29a42a771593d 428 SUPERFAMILY SSF102741 355 428 1.44E-24 T 13-10-2018 IPR036346 GTP-binding protein OBG, C-terminal domain superfamily COP00_08410 c73078e1c058988e46d29a42a771593d 428 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 210 225 5.3E-35 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 COP00_08410 c73078e1c058988e46d29a42a771593d 428 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 182 200 5.3E-35 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 COP00_08410 c73078e1c058988e46d29a42a771593d 428 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 161 181 5.3E-35 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 COP00_08410 c73078e1c058988e46d29a42a771593d 428 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 227 245 5.3E-35 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 COP00_08410 c73078e1c058988e46d29a42a771593d 428 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 160 320 9.8E-14 T 13-10-2018 IPR005225 Small GTP-binding protein domain GO:0005525 COP00_08410 c73078e1c058988e46d29a42a771593d 428 TIGRFAM TIGR03595 Obg_CgtA_exten: Obg family GTPase CgtA, C-terminal extension 358 426 2.7E-27 T 13-10-2018 IPR015349 GTP-binding protein OBG, C-terminal GO:0000166 COP00_08410 c73078e1c058988e46d29a42a771593d 428 ProSitePatterns PS00905 GTP1/OBG family signature. 212 225 - T 13-10-2018 IPR006074 GTP1/OBG, conserved site GO:0005525 COP00_08410 c73078e1c058988e46d29a42a771593d 428 PIRSF PIRSF002401 1 376 4.4E-147 T 13-10-2018 IPR035101 GTP-binding protein, Obg-type COP00_08410 c73078e1c058988e46d29a42a771593d 428 SUPERFAMILY SSF82051 1 157 7.98E-58 T 13-10-2018 IPR036726 GTP1/OBG domain superfamily COP00_08410 c73078e1c058988e46d29a42a771593d 428 Pfam PF09269 Domain of unknown function (DUF1967) 358 426 1.4E-26 T 13-10-2018 IPR015349 GTP-binding protein OBG, C-terminal GO:0000166 COP00_08410 c73078e1c058988e46d29a42a771593d 428 Gene3D G3DSA:2.70.210.12 1 157 5.2E-64 T 13-10-2018 IPR036726 GTP1/OBG domain superfamily COP00_08410 c73078e1c058988e46d29a42a771593d 428 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 2 328 1.9E-146 T 13-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 COP00_08410 c73078e1c058988e46d29a42a771593d 428 Pfam PF01018 GTP1/OBG 3 157 3.4E-62 T 13-10-2018 IPR006169 GTP1/OBG domain COP00_08410 c73078e1c058988e46d29a42a771593d 428 Hamap MF_01454 GTPase Obg [obg]. 1 329 49.225 T 13-10-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 COP00_08410 c73078e1c058988e46d29a42a771593d 428 Gene3D G3DSA:3.40.50.300 158 342 4.1E-64 T 13-10-2018 COP00_08410 c73078e1c058988e46d29a42a771593d 428 Pfam PF01926 50S ribosome-binding GTPase 160 283 3.5E-24 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 COP00_08410 c73078e1c058988e46d29a42a771593d 428 SUPERFAMILY SSF52540 160 331 9.64E-55 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_08410 c73078e1c058988e46d29a42a771593d 428 Gene3D G3DSA:2.40.240.60 356 428 2.9E-19 T 13-10-2018 IPR036346 GTP-binding protein OBG, C-terminal domain superfamily COP00_14060 36535cf9de1f5885e2b2a6579b783720 690 Gene3D G3DSA:1.10.3810.10 55 253 1.2E-73 T 13-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 COP00_14060 36535cf9de1f5885e2b2a6579b783720 690 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 73 607 3.7E-176 T 13-10-2018 COP00_14060 36535cf9de1f5885e2b2a6579b783720 690 Gene3D G3DSA:3.40.710.10 257 666 4.2E-115 T 13-10-2018 COP00_14060 36535cf9de1f5885e2b2a6579b783720 690 Pfam PF00912 Transglycosylase 62 237 1.8E-62 T 13-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 COP00_14060 36535cf9de1f5885e2b2a6579b783720 690 Pfam PF00905 Penicillin binding protein transpeptidase domain 329 570 1.3E-30 T 13-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 COP00_14060 36535cf9de1f5885e2b2a6579b783720 690 SUPERFAMILY SSF56601 219 657 2.21E-116 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like COP00_14060 36535cf9de1f5885e2b2a6579b783720 690 SUPERFAMILY SSF53955 50 262 4.22E-75 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily COP00_03645 7124626ee48383008330502b7d4b5124 48 Pfam PF08175 Small acid-soluble spore protein O family 3 48 4.5E-26 T 13-10-2018 COP00_03645 7124626ee48383008330502b7d4b5124 48 ProDom PD050103 O SPORE SMALL ACID-SOLUBLE SASP SPORULATION CAPSID COAT K SEQUENCING 3 48 3.0E-18 T 13-10-2018 IPR012613 Small acid-soluble spore protein, SspO GO:0030436|GO:0042601 COP00_03645 7124626ee48383008330502b7d4b5124 48 TIGRFAM TIGR02864 spore_sspO: small, acid-soluble spore protein O 2 48 2.7E-23 T 13-10-2018 IPR012613 Small acid-soluble spore protein, SspO GO:0030436|GO:0042601 COP00_14650 c7d95f2e881cc2e9ee0f43fe1aa174bc 157 Gene3D G3DSA:2.60.40.3490 37 157 2.7E-43 T 13-10-2018 IPR038480 YuaB-like superfamily COP00_14650 c7d95f2e881cc2e9ee0f43fe1aa174bc 157 ProDom PD034110 YWEA MEMBRANE YUAB TRANSMEMBRANE ORF-1 1 157 7.0E-72 T 13-10-2018 IPR034650 YuaB-like COP00_03835 40e6605fa7de3e58685104147def7ebb 123 Pfam PF07098 Protein of unknown function (DUF1360) 11 108 3.8E-33 T 13-10-2018 IPR010773 Mycobacterium phage PG1, Gp7 COP00_17115 ab28adc049d23de7e899e1bbebffb255 331 SUPERFAMILY SSF47384 126 193 4.71E-6 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 COP00_17115 ab28adc049d23de7e899e1bbebffb255 331 Gene3D G3DSA:3.30.565.10 205 330 1.9E-14 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily COP00_17115 ab28adc049d23de7e899e1bbebffb255 331 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 246 326 3.6E-8 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase COP00_17115 ab28adc049d23de7e899e1bbebffb255 331 SMART SM00387 244 331 6.4E-13 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase COP00_17115 ab28adc049d23de7e899e1bbebffb255 331 SUPERFAMILY SSF55874 207 326 6.29E-16 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily COP00_17115 ab28adc049d23de7e899e1bbebffb255 331 Gene3D G3DSA:1.10.287.130 72 192 3.2E-12 T 13-10-2018 COP00_17115 ab28adc049d23de7e899e1bbebffb255 331 SMART SM00388 136 198 0.0046 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 COP00_08760 99dde78d04ba481ce9c642f343082219 590 Gene3D G3DSA:3.40.1440.10 1 99 3.3E-38 T 13-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 COP00_08760 99dde78d04ba481ce9c642f343082219 590 SUPERFAMILY SSF46600 182 235 1.96E-14 T 13-10-2018 IPR036876 UVR domain superfamily COP00_08760 99dde78d04ba481ce9c642f343082219 590 Hamap MF_00203 UvrABC system protein C [uvrC]. 2 587 28.973 T 13-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 COP00_08760 99dde78d04ba481ce9c642f343082219 590 Gene3D G3DSA:3.30.420.340 365 523 1.3E-62 T 13-10-2018 IPR038476 UvrC homology region 2 superfamily COP00_08760 99dde78d04ba481ce9c642f343082219 590 SUPERFAMILY SSF82771 14 97 2.35E-20 T 13-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 COP00_08760 99dde78d04ba481ce9c642f343082219 590 SUPERFAMILY SSF47781 502 589 2.19E-22 T 13-10-2018 IPR010994 RuvA domain 2-like COP00_08760 99dde78d04ba481ce9c642f343082219 590 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 6 570 7.1E-224 T 13-10-2018 IPR004791 UvrABC system, subunit C GO:0006289|GO:0009380|GO:0009381 COP00_08760 99dde78d04ba481ce9c642f343082219 590 Pfam PF14520 Helix-hairpin-helix domain 539 590 5.7E-7 T 13-10-2018 COP00_08760 99dde78d04ba481ce9c642f343082219 590 Pfam PF02151 UvrB/uvrC motif 198 229 2.5E-10 T 13-10-2018 IPR001943 UVR domain GO:0005515 COP00_08760 99dde78d04ba481ce9c642f343082219 590 Gene3D G3DSA:1.10.150.20 527 589 1.5E-21 T 13-10-2018 COP00_08760 99dde78d04ba481ce9c642f343082219 590 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 373 523 2.7E-56 T 13-10-2018 IPR001162 UvrC family homology region COP00_08760 99dde78d04ba481ce9c642f343082219 590 Pfam PF01541 GIY-YIG catalytic domain 16 90 7.9E-10 T 13-10-2018 IPR000305 GIY-YIG endonuclease COP00_08760 99dde78d04ba481ce9c642f343082219 590 SMART SM00465 15 95 7.1E-25 T 13-10-2018 IPR000305 GIY-YIG endonuclease COP00_17020 81c9248075cadb34540265529a5d555d 438 Pfam PF07949 YbbR-like protein 55 135 7.1E-13 T 13-10-2018 IPR012505 YbbR-like COP00_17020 81c9248075cadb34540265529a5d555d 438 Pfam PF07949 YbbR-like protein 237 316 7.7E-17 T 13-10-2018 IPR012505 YbbR-like COP00_17020 81c9248075cadb34540265529a5d555d 438 Pfam PF07949 YbbR-like protein 143 228 6.8E-16 T 13-10-2018 IPR012505 YbbR-like COP00_17020 81c9248075cadb34540265529a5d555d 438 Gene3D G3DSA:2.170.120.30 323 421 3.9E-14 T 13-10-2018 COP00_17020 81c9248075cadb34540265529a5d555d 438 Gene3D G3DSA:2.170.120.30 43 143 5.4E-29 T 13-10-2018 COP00_17020 81c9248075cadb34540265529a5d555d 438 Gene3D G3DSA:2.170.120.40 234 319 5.2E-19 T 13-10-2018 COP00_17020 81c9248075cadb34540265529a5d555d 438 Gene3D G3DSA:2.170.120.40 144 232 1.7E-9 T 13-10-2018 COP00_08775 3b38a5e464b20e669e3a71fed717e7cd 257 Pfam PF01012 Electron transfer flavoprotein domain 24 206 6.8E-50 T 13-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 COP00_08775 3b38a5e464b20e669e3a71fed717e7cd 257 SMART SM00893 21 211 3.0E-60 T 13-10-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 COP00_08775 3b38a5e464b20e669e3a71fed717e7cd 257 SUPERFAMILY SSF52402 1 251 4.05E-76 T 13-10-2018 COP00_08775 3b38a5e464b20e669e3a71fed717e7cd 257 PIRSF PIRSF000090 1 257 1.4E-80 T 13-10-2018 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 COP00_08775 3b38a5e464b20e669e3a71fed717e7cd 257 Gene3D G3DSA:3.40.50.620 1 254 5.9E-85 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold COP00_06730 de72f814053c6a055bb86c86f15c9e39 364 Gene3D G3DSA:3.30.70.1400 51 136 1.4E-91 T 13-10-2018 COP00_06730 de72f814053c6a055bb86c86f15c9e39 364 Gene3D G3DSA:2.40.30.110 280 362 5.4E-34 T 13-10-2018 COP00_06730 de72f814053c6a055bb86c86f15c9e39 364 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 266 356 5.1E-29 T 13-10-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 COP00_06730 de72f814053c6a055bb86c86f15c9e39 364 PIRSF PIRSF006487 1 364 2.2E-105 T 13-10-2018 IPR028896 Aminomethyltransferase-like KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 COP00_06730 de72f814053c6a055bb86c86f15c9e39 364 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 2 362 9.0E-156 T 13-10-2018 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 COP00_06730 de72f814053c6a055bb86c86f15c9e39 364 Pfam PF01571 Aminomethyltransferase folate-binding domain 7 258 2.5E-96 T 13-10-2018 IPR006222 Aminomethyltransferase, folate-binding domain COP00_06730 de72f814053c6a055bb86c86f15c9e39 364 Gene3D G3DSA:3.30.1360.120 4 235 1.4E-91 T 13-10-2018 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 GO:0005515 COP00_06730 de72f814053c6a055bb86c86f15c9e39 364 Gene3D G3DSA:4.10.1250.10 236 278 2.0E-19 T 13-10-2018 COP00_06730 de72f814053c6a055bb86c86f15c9e39 364 SUPERFAMILY SSF103025 2 280 1.73E-103 T 13-10-2018 COP00_06730 de72f814053c6a055bb86c86f15c9e39 364 Hamap MF_00259 Aminomethyltransferase [gcvT]. 1 362 48.877 T 13-10-2018 IPR022903 Glycine cleavage system T protein, bacteria GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 COP00_06730 de72f814053c6a055bb86c86f15c9e39 364 SUPERFAMILY SSF101790 273 362 1.11E-26 T 13-10-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal COP00_06075 b0dc3750c087f5633a482e33f00029ab 254 PRINTS PR00046 Major sigma-70 factor signature 219 234 4.4E-11 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 COP00_06075 b0dc3750c087f5633a482e33f00029ab 254 PRINTS PR00046 Major sigma-70 factor signature 60 73 4.4E-11 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 COP00_06075 b0dc3750c087f5633a482e33f00029ab 254 PRINTS PR00046 Major sigma-70 factor signature 84 92 4.4E-11 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 COP00_06075 b0dc3750c087f5633a482e33f00029ab 254 PRINTS PR00046 Major sigma-70 factor signature 234 245 4.4E-11 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 COP00_06075 b0dc3750c087f5633a482e33f00029ab 254 PRINTS PR00046 Major sigma-70 factor signature 202 214 4.4E-11 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 COP00_06075 b0dc3750c087f5633a482e33f00029ab 254 TIGRFAM TIGR02980 SigBFG: RNA polymerase sigma-70 factor, sigma-B/F/G subfamily 30 249 2.4E-89 T 13-10-2018 IPR014322 RNA polymerase sigma-B/F/G type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 COP00_06075 b0dc3750c087f5633a482e33f00029ab 254 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 60 73 - T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 COP00_06075 b0dc3750c087f5633a482e33f00029ab 254 SUPERFAMILY SSF88659 170 250 2.62E-17 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like COP00_06075 b0dc3750c087f5633a482e33f00029ab 254 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 219 245 - T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 COP00_06075 b0dc3750c087f5633a482e33f00029ab 254 TIGRFAM TIGR02885 spore_sigF: RNA polymerase sigma-F factor 21 249 1.3E-114 T 13-10-2018 IPR014236 RNA polymerase sigma-F type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 COP00_06075 b0dc3750c087f5633a482e33f00029ab 254 Gene3D G3DSA:1.10.601.10 3 104 1.1E-27 T 13-10-2018 COP00_06075 b0dc3750c087f5633a482e33f00029ab 254 Gene3D G3DSA:1.10.10.10 178 253 1.3E-11 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_06075 b0dc3750c087f5633a482e33f00029ab 254 SUPERFAMILY SSF88946 13 104 6.93E-34 T 13-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 COP00_06075 b0dc3750c087f5633a482e33f00029ab 254 Pfam PF04539 Sigma-70 region 3 114 183 9.1E-15 T 13-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 COP00_06075 b0dc3750c087f5633a482e33f00029ab 254 SUPERFAMILY SSF88659 108 183 1.13E-17 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like COP00_06075 b0dc3750c087f5633a482e33f00029ab 254 Pfam PF04545 Sigma-70, region 4 198 246 1.1E-15 T 13-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 COP00_06075 b0dc3750c087f5633a482e33f00029ab 254 Gene3D G3DSA:1.10.10.10 105 159 1.0E-21 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_06075 b0dc3750c087f5633a482e33f00029ab 254 PIRSF PIRSF000770 3 254 1.9E-40 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 COP00_06075 b0dc3750c087f5633a482e33f00029ab 254 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 32 249 1.1E-36 T 13-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 COP00_06075 b0dc3750c087f5633a482e33f00029ab 254 Pfam PF04542 Sigma-70 region 2 36 103 1.2E-17 T 13-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 COP00_22310 188172621fa2ae8c8386694761a7e168 332 Gene3D G3DSA:1.10.3470.10 2 331 9.3E-96 T 13-10-2018 IPR037294 ABC transporter, BtuC-like COP00_22310 188172621fa2ae8c8386694761a7e168 332 SUPERFAMILY SSF81345 3 326 2.22E-82 T 13-10-2018 IPR037294 ABC transporter, BtuC-like COP00_22310 188172621fa2ae8c8386694761a7e168 332 Pfam PF01032 FecCD transport family 14 325 4.3E-94 T 13-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 COP00_11530 c078de664eb46026c3a043c416cf5e87 350 Gene3D G3DSA:3.40.50.720 7 318 1.3E-140 T 13-10-2018 COP00_11530 c078de664eb46026c3a043c416cf5e87 350 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 135 242 2.2E-20 T 13-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 COP00_11530 c078de664eb46026c3a043c416cf5e87 350 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 6 123 4.8E-24 T 13-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 COP00_11530 c078de664eb46026c3a043c416cf5e87 350 SUPERFAMILY SSF51735 5 201 3.31E-49 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily COP00_11530 c078de664eb46026c3a043c416cf5e87 350 Gene3D G3DSA:3.30.360.10 124 341 1.3E-140 T 13-10-2018 COP00_16255 fe685faeeefd911c738e6495d8a6019b 277 SUPERFAMILY SSF53271 95 270 5.38E-41 T 13-10-2018 IPR029057 Phosphoribosyltransferase-like COP00_16255 fe685faeeefd911c738e6495d8a6019b 277 Pfam PF00156 Phosphoribosyl transferase domain 108 263 3.7E-24 T 13-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 COP00_16255 fe685faeeefd911c738e6495d8a6019b 277 SUPERFAMILY SSF46785 2 73 2.48E-26 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_16255 fe685faeeefd911c738e6495d8a6019b 277 Gene3D G3DSA:1.10.10.10 1 73 2.0E-31 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_16255 fe685faeeefd911c738e6495d8a6019b 277 ProDom PD029816 REPRESSOR OPERON PUR TRANSCRIPTION PURINE TRANSCRIPTIONAL PURR REGULATION DNA-BINDING GLYCOSYLTRANSFERASE 9 74 2.0E-32 T 13-10-2018 IPR015265 Bacterial purine repressor, N-terminal GO:0003677|GO:0006355 COP00_16255 fe685faeeefd911c738e6495d8a6019b 277 TIGRFAM TIGR01743 purR_Bsub: pur operon repressor PurR 3 269 8.2E-132 T 13-10-2018 IPR010078 Pur operon repressor GO:0003677|GO:0045892|GO:0045982 COP00_16255 fe685faeeefd911c738e6495d8a6019b 277 Pfam PF09182 Bacterial purine repressor, N-terminal 4 73 3.6E-31 T 13-10-2018 IPR015265 Bacterial purine repressor, N-terminal GO:0003677|GO:0006355 COP00_16255 fe685faeeefd911c738e6495d8a6019b 277 Gene3D G3DSA:3.40.50.2020 74 274 5.4E-62 T 13-10-2018 COP00_01490 9ea695afc958172ce81bc53447161e03 254 Pfam PF04539 Sigma-70 region 3 106 184 3.0E-9 T 13-10-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003700|GO:0006352|GO:0006355 COP00_01490 9ea695afc958172ce81bc53447161e03 254 SUPERFAMILY SSF88946 6 99 1.88E-25 T 13-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 COP00_01490 9ea695afc958172ce81bc53447161e03 254 Pfam PF04542 Sigma-70 region 2 27 99 1.3E-15 T 13-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 COP00_01490 9ea695afc958172ce81bc53447161e03 254 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 219 245 - T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 COP00_01490 9ea695afc958172ce81bc53447161e03 254 PIRSF PIRSF000770 12 253 1.0E-38 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 COP00_01490 9ea695afc958172ce81bc53447161e03 254 PRINTS PR00046 Major sigma-70 factor signature 54 67 2.1E-13 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 COP00_01490 9ea695afc958172ce81bc53447161e03 254 PRINTS PR00046 Major sigma-70 factor signature 234 245 2.1E-13 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 COP00_01490 9ea695afc958172ce81bc53447161e03 254 PRINTS PR00046 Major sigma-70 factor signature 219 234 2.1E-13 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 COP00_01490 9ea695afc958172ce81bc53447161e03 254 PRINTS PR00046 Major sigma-70 factor signature 202 214 2.1E-13 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 COP00_01490 9ea695afc958172ce81bc53447161e03 254 PRINTS PR00046 Major sigma-70 factor signature 78 86 2.1E-13 T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 COP00_01490 9ea695afc958172ce81bc53447161e03 254 Gene3D G3DSA:1.20.140.160 98 252 2.9E-43 T 13-10-2018 COP00_01490 9ea695afc958172ce81bc53447161e03 254 SUPERFAMILY SSF88659 163 250 4.11E-21 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like COP00_01490 9ea695afc958172ce81bc53447161e03 254 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 24 248 1.6E-32 T 13-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 COP00_01490 9ea695afc958172ce81bc53447161e03 254 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 54 67 - T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 COP00_01490 9ea695afc958172ce81bc53447161e03 254 SUPERFAMILY SSF88659 100 168 2.71E-13 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like COP00_01490 9ea695afc958172ce81bc53447161e03 254 Gene3D G3DSA:1.10.1740.10 14 96 3.9E-28 T 13-10-2018 COP00_01490 9ea695afc958172ce81bc53447161e03 254 Pfam PF04545 Sigma-70, region 4 199 247 2.3E-16 T 13-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 COP00_01490 9ea695afc958172ce81bc53447161e03 254 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 27 249 3.4E-85 T 13-10-2018 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 COP00_08445 847f98959ce7ab0c878ce8aa1e4f2bbd 144 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 19 134 8.5E-15 T 13-10-2018 IPR013538 Activator of Hsp90 ATPase homologue 1-like COP00_08445 847f98959ce7ab0c878ce8aa1e4f2bbd 144 SUPERFAMILY SSF55961 5 143 7.74E-43 T 13-10-2018 COP00_08445 847f98959ce7ab0c878ce8aa1e4f2bbd 144 Gene3D G3DSA:3.30.530.20 1 143 1.6E-43 T 13-10-2018 IPR023393 START-like domain superfamily COP00_03705 72da1fc55fbaf281a4299f2f297ac374 807 SUPERFAMILY SSF101904 499 804 2.88E-93 T 13-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal COP00_03705 72da1fc55fbaf281a4299f2f297ac374 807 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 12 799 3.6E-271 T 13-10-2018 COP00_03705 72da1fc55fbaf281a4299f2f297ac374 807 Gene3D G3DSA:3.90.199.10 31 485 2.4E-199 T 13-10-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 COP00_03705 72da1fc55fbaf281a4299f2f297ac374 807 TIGRFAM TIGR01061 parC_Gpos: DNA topoisomerase IV, A subunit 7 744 0.0 T 13-10-2018 IPR005741 DNA topoisomerase IV subunit A, Gram-positive GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 COP00_03705 72da1fc55fbaf281a4299f2f297ac374 807 SUPERFAMILY SSF56719 30 485 7.46E-171 T 13-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 COP00_03705 72da1fc55fbaf281a4299f2f297ac374 807 SMART SM00434 10 463 3.2E-270 T 13-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 COP00_03705 72da1fc55fbaf281a4299f2f297ac374 807 Hamap MF_00937 DNA topoisomerase 4 subunit A [parC]. 6 802 33.488 T 13-10-2018 IPR005741 DNA topoisomerase IV subunit A, Gram-positive GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 COP00_03705 72da1fc55fbaf281a4299f2f297ac374 807 Gene3D G3DSA:3.30.1360.40 235 331 2.4E-199 T 13-10-2018 COP00_03705 72da1fc55fbaf281a4299f2f297ac374 807 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 507 519 3.4 T 13-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 COP00_03705 72da1fc55fbaf281a4299f2f297ac374 807 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 605 650 7.1E-7 T 13-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 COP00_03705 72da1fc55fbaf281a4299f2f297ac374 807 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 704 753 2.1E-5 T 13-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 COP00_03705 72da1fc55fbaf281a4299f2f297ac374 807 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 549 599 2.0E-6 T 13-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 COP00_03705 72da1fc55fbaf281a4299f2f297ac374 807 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 655 696 1.3E-8 T 13-10-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 COP00_03705 72da1fc55fbaf281a4299f2f297ac374 807 Gene3D G3DSA:1.10.268.10 368 456 2.4E-199 T 13-10-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain superfamily GO:0003677|GO:0003918|GO:0005524 Reactome: R-HSA-4615885 COP00_03705 72da1fc55fbaf281a4299f2f297ac374 807 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 31 470 2.1E-154 T 13-10-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 COP00_03705 72da1fc55fbaf281a4299f2f297ac374 807 Gene3D G3DSA:2.120.10.90 499 807 8.1E-103 T 13-10-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal COP00_18480 64e9e91643cd8dcc5d47a053af9013a5 359 Gene3D G3DSA:3.40.50.2300 136 352 3.3E-138 T 13-10-2018 COP00_18480 64e9e91643cd8dcc5d47a053af9013a5 359 Pfam PF13407 Periplasmic binding protein domain 34 311 2.9E-68 T 13-10-2018 IPR025997 Periplasmic binding protein COP00_18480 64e9e91643cd8dcc5d47a053af9013a5 359 Gene3D G3DSA:3.40.50.2300 34 332 3.3E-138 T 13-10-2018 COP00_18480 64e9e91643cd8dcc5d47a053af9013a5 359 SUPERFAMILY SSF53822 31 345 1.65E-73 T 13-10-2018 IPR028082 Periplasmic binding protein-like I COP00_22780 870fdeed0e259872d378a884f5445a9b 62 ProDom PD027277 REPRESSOR COMZ COMG OPERON TRANSCRIPTION POSSIBLE COMPETENCE PROTEIN-RELATED BH2888 REGULATION 3 57 5.0E-22 T 13-10-2018 IPR024558 ComZ COP00_22780 870fdeed0e259872d378a884f5445a9b 62 Pfam PF10815 ComZ 4 58 2.1E-32 T 13-10-2018 IPR024558 ComZ COP00_15245 ea1a5f0d727a97c83193cf1324b18436 424 Gene3D G3DSA:3.30.470.20 103 424 3.2E-122 T 13-10-2018 COP00_15245 ea1a5f0d727a97c83193cf1324b18436 424 Gene3D G3DSA:3.40.50.20 1 102 3.5E-37 T 13-10-2018 COP00_15245 ea1a5f0d727a97c83193cf1324b18436 424 Pfam PF13535 ATP-grasp domain 145 296 2.1E-29 T 13-10-2018 COP00_15245 ea1a5f0d727a97c83193cf1324b18436 424 SUPERFAMILY SSF56059 112 317 1.03E-37 T 13-10-2018 COP00_14150 fed650d42533e782c49fa3d1bf0e6d9d 320 SUPERFAMILY SSF51556 2 299 7.71E-65 T 13-10-2018 IPR032466 Metal-dependent hydrolase COP00_14150 fed650d42533e782c49fa3d1bf0e6d9d 320 Gene3D G3DSA:3.20.20.140 1 317 7.5E-72 T 13-10-2018 COP00_14150 fed650d42533e782c49fa3d1bf0e6d9d 320 Pfam PF04909 Amidohydrolase 3 303 1.6E-32 T 13-10-2018 IPR006680 Amidohydrolase-related GO:0016787 COP00_00430 4be6397f1d83e8cc158bd82eb964f6d3 376 Gene3D G3DSA:2.40.30.170 212 267 5.2E-20 T 13-10-2018 COP00_00430 4be6397f1d83e8cc158bd82eb964f6d3 376 Gene3D G3DSA:1.10.287.470 97 166 5.2E-20 T 13-10-2018 COP00_00430 4be6397f1d83e8cc158bd82eb964f6d3 376 Gene3D G3DSA:2.40.50.100 72 211 5.2E-20 T 13-10-2018 COP00_00430 4be6397f1d83e8cc158bd82eb964f6d3 376 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 40 376 5.3E-29 T 13-10-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 COP00_00430 4be6397f1d83e8cc158bd82eb964f6d3 376 Gene3D G3DSA:2.40.420.20 289 376 1.7E-17 T 13-10-2018 COP00_00430 4be6397f1d83e8cc158bd82eb964f6d3 376 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 47 257 1.1E-11 T 13-10-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain COP00_17830 365d5c38e945672a0200458a099164dd 459 Gene3D G3DSA:3.30.565.10 297 457 1.9E-27 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily COP00_17830 365d5c38e945672a0200458a099164dd 459 SUPERFAMILY SSF47384 221 299 3.73E-11 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 COP00_17830 365d5c38e945672a0200458a099164dd 459 SMART SM00388 236 301 4.1E-10 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 COP00_17830 365d5c38e945672a0200458a099164dd 459 SMART SM00387 347 458 2.8E-20 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase COP00_17830 365d5c38e945672a0200458a099164dd 459 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 348 457 1.7E-14 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase COP00_17830 365d5c38e945672a0200458a099164dd 459 Pfam PF00512 His Kinase A (phospho-acceptor) domain 236 300 2.4E-8 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 COP00_17830 365d5c38e945672a0200458a099164dd 459 PRINTS PR01780 Lantibiotic regulatory protein signature 208 222 1.2E-8 T 13-10-2018 IPR008358 Signal transduction histidine kinase/phosphatase, lantibiotic regulatory protein MprB GO:0000155|GO:0000160|GO:0004673|GO:0016020 COP00_17830 365d5c38e945672a0200458a099164dd 459 PRINTS PR01780 Lantibiotic regulatory protein signature 245 261 1.2E-8 T 13-10-2018 IPR008358 Signal transduction histidine kinase/phosphatase, lantibiotic regulatory protein MprB GO:0000155|GO:0000160|GO:0004673|GO:0016020 COP00_17830 365d5c38e945672a0200458a099164dd 459 PRINTS PR01780 Lantibiotic regulatory protein signature 408 423 1.2E-8 T 13-10-2018 IPR008358 Signal transduction histidine kinase/phosphatase, lantibiotic regulatory protein MprB GO:0000155|GO:0000160|GO:0004673|GO:0016020 COP00_17830 365d5c38e945672a0200458a099164dd 459 Gene3D G3DSA:1.10.287.130 204 296 8.8E-12 T 13-10-2018 COP00_17830 365d5c38e945672a0200458a099164dd 459 SUPERFAMILY SSF55874 309 456 1.31E-27 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily COP00_19755 2bd440f036c1247a29158ac5a9bafc55 570 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 12 150 2.2E-24 T 13-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 COP00_19755 2bd440f036c1247a29158ac5a9bafc55 570 Pfam PF06605 Prophage endopeptidase tail 226 550 8.7E-69 T 13-10-2018 IPR010572 Prophage tail endopeptidase COP00_19755 2bd440f036c1247a29158ac5a9bafc55 570 SMART SM00047 2 154 3.1E-54 T 13-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 COP00_19755 2bd440f036c1247a29158ac5a9bafc55 570 Gene3D G3DSA:3.55.50.40 287 375 1.3E-13 T 13-10-2018 COP00_19755 2bd440f036c1247a29158ac5a9bafc55 570 PRINTS PR01002 Flagellar protein FlgJ signature 111 130 6.2E-7 T 13-10-2018 COP00_19755 2bd440f036c1247a29158ac5a9bafc55 570 PRINTS PR01002 Flagellar protein FlgJ signature 131 149 6.2E-7 T 13-10-2018 COP00_19755 2bd440f036c1247a29158ac5a9bafc55 570 PRINTS PR01002 Flagellar protein FlgJ signature 25 43 6.2E-7 T 13-10-2018 COP00_19755 2bd440f036c1247a29158ac5a9bafc55 570 Gene3D G3DSA:4.10.80.30 57 83 8.0E-53 T 13-10-2018 COP00_19755 2bd440f036c1247a29158ac5a9bafc55 570 Gene3D G3DSA:1.10.530.10 6 154 8.0E-53 T 13-10-2018 COP00_14235 97f7b062d4f056e808137f3c5b63c1f8 479 ProSitePatterns PS00609 Glycosyl hydrolases family 32 active site. 33 46 - T 13-10-2018 IPR018053 Glycoside hydrolase, family 32, active site GO:0004553|GO:0005975 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26 COP00_14235 97f7b062d4f056e808137f3c5b63c1f8 479 Gene3D G3DSA:2.60.120.560 356 478 4.4E-12 T 13-10-2018 COP00_14235 97f7b062d4f056e808137f3c5b63c1f8 479 SUPERFAMILY SSF75005 24 339 7.22E-114 T 13-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily COP00_14235 97f7b062d4f056e808137f3c5b63c1f8 479 Pfam PF00251 Glycosyl hydrolases family 32 N-terminal domain 33 338 7.2E-107 T 13-10-2018 IPR013148 Glycosyl hydrolase family 32, N-terminal COP00_14235 97f7b062d4f056e808137f3c5b63c1f8 479 TIGRFAM TIGR01322 scrB_fam: sucrose-6-phosphate hydrolase 19 454 1.0E-176 T 13-10-2018 IPR006232 Sucrose-6-phosphate hydrolase GO:0004564|GO:0005737|GO:0005975 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26 COP00_14235 97f7b062d4f056e808137f3c5b63c1f8 479 SUPERFAMILY SSF49899 339 478 1.35E-20 T 13-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily COP00_14235 97f7b062d4f056e808137f3c5b63c1f8 479 Gene3D G3DSA:2.115.10.20 1 355 4.4E-119 T 13-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily COP00_14235 97f7b062d4f056e808137f3c5b63c1f8 479 Pfam PF08244 Glycosyl hydrolases family 32 C terminal 394 468 5.4E-10 T 13-10-2018 IPR013189 Glycosyl hydrolase family 32, C-terminal COP00_14235 97f7b062d4f056e808137f3c5b63c1f8 479 SMART SM00640 33 444 4.2E-140 T 13-10-2018 IPR001362 Glycoside hydrolase, family 32 GO:0004553|GO:0005975 COP00_17810 e6bac92f0ef18b80f473b87bf617e110 238 Gene3D G3DSA:3.40.50.300 3 232 2.2E-61 T 13-10-2018 COP00_17810 e6bac92f0ef18b80f473b87bf617e110 238 TIGRFAM TIGR03740 galliderm_ABC: lantibiotic protection ABC transporter, ATP-binding subunit 6 228 2.9E-116 T 13-10-2018 IPR022501 Gallidermin ABC transporter, ATP-binding subunit COP00_17810 e6bac92f0ef18b80f473b87bf617e110 238 SUPERFAMILY SSF52540 2 215 1.12E-60 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_17810 e6bac92f0ef18b80f473b87bf617e110 238 SMART SM00382 30 214 6.8E-14 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_17810 e6bac92f0ef18b80f473b87bf617e110 238 Pfam PF00005 ABC transporter 22 158 9.5E-34 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 COP00_14515 a57fd65922fc0d03e037e77fe63bec0f 454 Pfam PF07690 Major Facilitator Superfamily 16 408 2.4E-56 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 COP00_14515 a57fd65922fc0d03e037e77fe63bec0f 454 Gene3D G3DSA:1.20.1720.10 11 247 1.4E-38 T 13-10-2018 COP00_14515 a57fd65922fc0d03e037e77fe63bec0f 454 Gene3D G3DSA:1.20.1250.20 255 452 3.5E-25 T 13-10-2018 COP00_14515 a57fd65922fc0d03e037e77fe63bec0f 454 SUPERFAMILY SSF103473 4 450 4.32E-64 T 13-10-2018 IPR036259 MFS transporter superfamily COP00_23240 dda3d118fb906063308d0eae53bdefc2 125 SUPERFAMILY SSF54593 1 124 7.92E-27 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase COP00_23240 dda3d118fb906063308d0eae53bdefc2 125 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 2 123 2.1E-17 T 13-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain COP00_23240 dda3d118fb906063308d0eae53bdefc2 125 Gene3D G3DSA:3.10.180.10 1 125 5.8E-37 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase COP00_16185 a8b19a174a59f7f9cf1310e20c78faff 120 PIRSF PIRSF021439 1 120 1.1E-42 T 13-10-2018 IPR010377 Initiation control protein YabA GO:0006260 COP00_16185 a8b19a174a59f7f9cf1310e20c78faff 120 Pfam PF06156 Initiation control protein YabA 1 115 3.1E-38 T 13-10-2018 IPR010377 Initiation control protein YabA GO:0006260 COP00_16185 a8b19a174a59f7f9cf1310e20c78faff 120 Hamap MF_01159 Initiation-control protein YabA. 1 119 25.446 T 13-10-2018 IPR010377 Initiation control protein YabA GO:0006260 COP00_17880 9ea93cf76b159126b3bb93f8aff9ad09 497 ProSitePatterns PS00571 Amidases signature. 150 181 - T 13-10-2018 IPR020556 Amidase, conserved site KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921|Reactome: R-HSA-2142753 COP00_17880 9ea93cf76b159126b3bb93f8aff9ad09 497 Gene3D G3DSA:3.90.1300.10 4 495 2.2E-150 T 13-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 COP00_17880 9ea93cf76b159126b3bb93f8aff9ad09 497 Pfam PF01425 Amidase 27 475 9.3E-92 T 13-10-2018 IPR023631 Amidase signature domain KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 COP00_17880 9ea93cf76b159126b3bb93f8aff9ad09 497 SUPERFAMILY SSF75304 3 483 2.88E-120 T 13-10-2018 IPR036928 Amidase signature (AS) superfamily KEGG: 00970+6.3.5.7|MetaCyc: PWY-5921 COP00_14930 3934e45e4304b10ffb99ef27a6af4580 316 PRINTS PR01469 Bacterial carbamate kinase signature 161 180 2.6E-63 T 13-10-2018 COP00_14930 3934e45e4304b10ffb99ef27a6af4580 316 PRINTS PR01469 Bacterial carbamate kinase signature 184 202 2.6E-63 T 13-10-2018 COP00_14930 3934e45e4304b10ffb99ef27a6af4580 316 PRINTS PR01469 Bacterial carbamate kinase signature 214 229 2.6E-63 T 13-10-2018 COP00_14930 3934e45e4304b10ffb99ef27a6af4580 316 PRINTS PR01469 Bacterial carbamate kinase signature 269 284 2.6E-63 T 13-10-2018 COP00_14930 3934e45e4304b10ffb99ef27a6af4580 316 PRINTS PR01469 Bacterial carbamate kinase signature 75 93 2.6E-63 T 13-10-2018 COP00_14930 3934e45e4304b10ffb99ef27a6af4580 316 PRINTS PR01469 Bacterial carbamate kinase signature 43 62 2.6E-63 T 13-10-2018 COP00_14930 3934e45e4304b10ffb99ef27a6af4580 316 PRINTS PR01469 Bacterial carbamate kinase signature 110 129 2.6E-63 T 13-10-2018 COP00_14930 3934e45e4304b10ffb99ef27a6af4580 316 Pfam PF00696 Amino acid kinase family 5 296 9.5E-30 T 13-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 COP00_14930 3934e45e4304b10ffb99ef27a6af4580 316 SUPERFAMILY SSF53633 4 313 3.67E-79 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily COP00_14930 3934e45e4304b10ffb99ef27a6af4580 316 TIGRFAM TIGR00746 arcC: carbamate kinase 4 314 7.7E-127 T 13-10-2018 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 COP00_14930 3934e45e4304b10ffb99ef27a6af4580 316 Gene3D G3DSA:3.40.1160.10 2 315 9.5E-120 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily COP00_14930 3934e45e4304b10ffb99ef27a6af4580 316 PIRSF PIRSF000723 2 315 6.3E-121 T 13-10-2018 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 COP00_18340 b30870887701b8175c400afdd69b5570 573 SUPERFAMILY SSF58104 234 570 8.76E-67 T 13-10-2018 COP00_18340 b30870887701b8175c400afdd69b5570 573 Gene3D G3DSA:1.10.287.950 270 570 8.8E-63 T 13-10-2018 COP00_18340 b30870887701b8175c400afdd69b5570 573 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 342 524 6.2E-36 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 COP00_18340 b30870887701b8175c400afdd69b5570 573 Pfam PF00672 HAMP domain 215 262 1.1E-13 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 COP00_18340 b30870887701b8175c400afdd69b5570 573 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 319 348 1.3E-21 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 COP00_18340 b30870887701b8175c400afdd69b5570 573 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 422 451 1.3E-21 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 COP00_18340 b30870887701b8175c400afdd69b5570 573 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 393 420 1.3E-21 T 13-10-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004888|GO:0006935|GO:0007165|GO:0016020 COP00_18340 b30870887701b8175c400afdd69b5570 573 Gene3D G3DSA:1.20.1480.50 179 269 1.8E-17 T 13-10-2018 COP00_18340 b30870887701b8175c400afdd69b5570 573 SMART SM00304 214 266 2.0E-15 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 COP00_18340 b30870887701b8175c400afdd69b5570 573 SUPERFAMILY SSF103190 84 180 5.89E-6 T 13-10-2018 IPR029151 Periplasmic sensor-like domain superfamily COP00_18340 b30870887701b8175c400afdd69b5570 573 SMART SM00283 295 570 4.9E-66 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 COP00_11515 fde0108f104c15c137b1727f7fb49884 404 SUPERFAMILY SSF103473 7 388 2.49E-67 T 13-10-2018 IPR036259 MFS transporter superfamily COP00_11515 fde0108f104c15c137b1727f7fb49884 404 PRINTS PR01036 Tetracycline resistance protein TetB signature 132 156 3.7E-8 T 13-10-2018 COP00_11515 fde0108f104c15c137b1727f7fb49884 404 PRINTS PR01036 Tetracycline resistance protein TetB signature 295 319 3.7E-8 T 13-10-2018 COP00_11515 fde0108f104c15c137b1727f7fb49884 404 PRINTS PR01036 Tetracycline resistance protein TetB signature 102 122 3.7E-8 T 13-10-2018 COP00_11515 fde0108f104c15c137b1727f7fb49884 404 PRINTS PR01036 Tetracycline resistance protein TetB signature 11 35 3.7E-8 T 13-10-2018 COP00_11515 fde0108f104c15c137b1727f7fb49884 404 Pfam PF07690 Major Facilitator Superfamily 12 352 4.5E-50 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 COP00_11515 fde0108f104c15c137b1727f7fb49884 404 Gene3D G3DSA:1.20.1720.10 8 395 3.6E-67 T 13-10-2018 COP00_16095 86628e3180db57102681de7db221b0c5 107 Gene3D G3DSA:3.30.1310.10 2 107 6.2E-40 T 13-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily COP00_16095 86628e3180db57102681de7db221b0c5 107 Pfam PF02575 YbaB/EbfC DNA-binding family 12 102 4.8E-35 T 13-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family COP00_16095 86628e3180db57102681de7db221b0c5 107 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 6 100 23.763 T 13-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family COP00_16095 86628e3180db57102681de7db221b0c5 107 SUPERFAMILY SSF82607 12 106 7.32E-35 T 13-10-2018 IPR036894 Nucleoid-associated protein YbaB-like domain superfamily COP00_16095 86628e3180db57102681de7db221b0c5 107 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 1 106 4.8E-35 T 13-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family COP00_16095 86628e3180db57102681de7db221b0c5 107 PIRSF PIRSF004555 4 107 1.8E-40 T 13-10-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family COP00_14540 474ed10667889b2fdbd01cad66ffe1f3 502 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 28 427 2.8E-107 T 13-10-2018 IPR010071 Amino acid adenylation domain COP00_14540 474ed10667889b2fdbd01cad66ffe1f3 502 Gene3D G3DSA:3.40.50.12780 1 396 1.8E-133 T 13-10-2018 COP00_14540 474ed10667889b2fdbd01cad66ffe1f3 502 Pfam PF13193 AMP-binding enzyme C-terminal domain 411 490 9.2E-11 T 13-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain COP00_14540 474ed10667889b2fdbd01cad66ffe1f3 502 SUPERFAMILY SSF56801 3 499 1.18E-128 T 13-10-2018 COP00_14540 474ed10667889b2fdbd01cad66ffe1f3 502 ProSitePatterns PS00455 Putative AMP-binding domain signature. 147 158 - T 13-10-2018 IPR020845 AMP-binding, conserved site COP00_14540 474ed10667889b2fdbd01cad66ffe1f3 502 Gene3D G3DSA:3.30.300.30 397 501 6.0E-31 T 13-10-2018 COP00_14540 474ed10667889b2fdbd01cad66ffe1f3 502 TIGRFAM TIGR01734 D-ala-DACP-lig: D-alanine--poly(phosphoribitol) ligase, subunit 1 2 500 5.1E-222 T 13-10-2018 IPR010072 D-alanine--D-alanyl carrier protein ligase GO:0005524|GO:0047473|GO:0070395 COP00_14540 474ed10667889b2fdbd01cad66ffe1f3 502 Pfam PF00501 AMP-binding enzyme 9 402 3.7E-93 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 COP00_14540 474ed10667889b2fdbd01cad66ffe1f3 502 Hamap MF_00593 D-alanine--D-alanyl carrier protein ligase [dltA]. 1 502 237.976 T 13-10-2018 IPR010072 D-alanine--D-alanyl carrier protein ligase GO:0005524|GO:0047473|GO:0070395 COP00_05125 bd1bc83afe39c98192ad219343ed7c0a 258 SUPERFAMILY SSF55729 154 249 1.37E-20 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase COP00_05125 bd1bc83afe39c98192ad219343ed7c0a 258 Gene3D G3DSA:3.40.630.30 13 252 2.7E-28 T 13-10-2018 COP00_05125 bd1bc83afe39c98192ad219343ed7c0a 258 Pfam PF00583 Acetyltransferase (GNAT) family 146 241 6.8E-16 T 13-10-2018 IPR000182 GNAT domain COP00_09870 15e5900cd88ddeb8e33017ed304fbffd 264 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 56 69 - T 13-10-2018 IPR018313 Solute-binding protein family 3, conserved site COP00_09870 15e5900cd88ddeb8e33017ed304fbffd 264 SUPERFAMILY SSF53850 4 258 4.29E-69 T 13-10-2018 COP00_09870 15e5900cd88ddeb8e33017ed304fbffd 264 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 35 255 4.2E-62 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF COP00_09870 15e5900cd88ddeb8e33017ed304fbffd 264 SMART SM00079 36 256 0.0061 T 13-10-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 COP00_09870 15e5900cd88ddeb8e33017ed304fbffd 264 SMART SM00062 34 257 2.5E-83 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF COP00_09870 15e5900cd88ddeb8e33017ed304fbffd 264 Gene3D G3DSA:3.40.190.10 40 254 1.7E-64 T 13-10-2018 COP00_09870 15e5900cd88ddeb8e33017ed304fbffd 264 Gene3D G3DSA:3.40.190.10 116 216 1.7E-64 T 13-10-2018 COP00_06185 da173d43f9aebd39fa407a28cc7f472d 465 Gene3D G3DSA:1.10.10.10 17 91 1.9E-16 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_06185 da173d43f9aebd39fa407a28cc7f472d 465 Pfam PF00155 Aminotransferase class I and II 136 452 6.5E-25 T 13-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 COP00_06185 da173d43f9aebd39fa407a28cc7f472d 465 SUPERFAMILY SSF46785 23 94 5.71E-15 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_06185 da173d43f9aebd39fa407a28cc7f472d 465 SMART SM00345 31 90 8.7E-11 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 COP00_06185 da173d43f9aebd39fa407a28cc7f472d 465 Gene3D G3DSA:3.40.640.10 143 359 7.7E-57 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 COP00_06185 da173d43f9aebd39fa407a28cc7f472d 465 SUPERFAMILY SSF53383 103 463 8.25E-66 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase COP00_06185 da173d43f9aebd39fa407a28cc7f472d 465 Pfam PF00392 Bacterial regulatory proteins, gntR family 28 90 2.4E-12 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 COP00_06185 da173d43f9aebd39fa407a28cc7f472d 465 Gene3D G3DSA:3.90.1150.10 104 461 7.7E-57 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 COP00_03185 c3b2ac321179ffc7064f24f1ad3dac7d 806 SMART SM00885 337 486 2.9E-44 T 13-10-2018 IPR014818 Bacteriophage/plasmid primase, P4, C-terminal COP00_03185 c3b2ac321179ffc7064f24f1ad3dac7d 806 Gene3D G3DSA:3.40.50.300 494 678 2.2E-5 T 13-10-2018 COP00_03185 c3b2ac321179ffc7064f24f1ad3dac7d 806 SUPERFAMILY SSF52540 509 672 9.38E-9 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_03185 c3b2ac321179ffc7064f24f1ad3dac7d 806 TIGRFAM TIGR01613 primase_Cterm: phage/plasmid primase, P4 family, C-terminal domain 437 744 8.7E-103 T 13-10-2018 IPR006500 DNA primase, phage/plasmid COP00_03185 c3b2ac321179ffc7064f24f1ad3dac7d 806 Pfam PF08706 D5 N terminal like 337 485 1.5E-30 T 13-10-2018 IPR014818 Bacteriophage/plasmid primase, P4, C-terminal COP00_07565 14f17506057ed208367b8d001eaf4299 733 SUPERFAMILY SSF82866 126 333 9.94E-28 T 13-10-2018 COP00_07565 14f17506057ed208367b8d001eaf4299 733 Pfam PF03176 MMPL family 433 700 1.1E-41 T 13-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 COP00_07565 14f17506057ed208367b8d001eaf4299 733 Pfam PF03176 MMPL family 45 368 1.3E-63 T 13-10-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 COP00_07565 14f17506057ed208367b8d001eaf4299 733 SUPERFAMILY SSF82866 462 697 2.22E-32 T 13-10-2018 COP00_04835 516a976ad309ed5bc4281e7081d80741 114 Gene3D G3DSA:2.30.29.50 5 113 1.7E-26 T 13-10-2018 IPR037063 Bacterial Pleckstrin homology domain superfamily COP00_04835 516a976ad309ed5bc4281e7081d80741 114 SUPERFAMILY SSF50729 11 112 1.23E-23 T 13-10-2018 COP00_04835 516a976ad309ed5bc4281e7081d80741 114 Pfam PF08000 Bacterial PH domain 13 111 4.2E-20 T 13-10-2018 IPR012544 Bacterial Pleckstrin homology domain COP00_19400 f9ebec7e82fd49697658a285d92c0221 319 PIRSF PIRSF017082 1 319 2.5E-99 T 13-10-2018 IPR005064 Bordetella uptake gene GO:0030288 COP00_19400 f9ebec7e82fd49697658a285d92c0221 319 Gene3D G3DSA:3.40.190.10 123 249 1.1E-59 T 13-10-2018 COP00_19400 f9ebec7e82fd49697658a285d92c0221 319 SUPERFAMILY SSF53850 34 232 7.6E-9 T 13-10-2018 COP00_19400 f9ebec7e82fd49697658a285d92c0221 319 Gene3D G3DSA:3.40.190.150 28 313 1.1E-59 T 13-10-2018 COP00_19400 f9ebec7e82fd49697658a285d92c0221 319 Pfam PF03401 Tripartite tricarboxylate transporter family receptor 69 315 7.7E-23 T 13-10-2018 IPR005064 Bordetella uptake gene GO:0030288 COP00_10135 8cc1b5a1c74c6bf7e730ef1c26f7aad1 107 SMART SM01058 1 77 0.0017 T 13-10-2018 IPR003711 CarD-like/TRCF domain COP00_10135 8cc1b5a1c74c6bf7e730ef1c26f7aad1 107 Gene3D G3DSA:2.30.30.840 1 65 7.7E-16 T 13-10-2018 COP00_10135 8cc1b5a1c74c6bf7e730ef1c26f7aad1 107 Pfam PF02559 CarD-like/TRCF domain 2 64 2.1E-9 T 13-10-2018 IPR003711 CarD-like/TRCF domain COP00_10135 8cc1b5a1c74c6bf7e730ef1c26f7aad1 107 SUPERFAMILY SSF141259 1 61 2.09E-10 T 13-10-2018 IPR036101 CarD-like/TRCF domain superfamily COP00_01255 a21f02b4d65b327d7d4a719190386cbc 128 Pfam PF11068 YlqD protein 1 126 2.7E-37 T 13-10-2018 IPR021297 YlqD protein COP00_11170 2cc7f47a57baed57f6b54043d6e7e9c2 362 SMART SM00387 255 348 5.9E-8 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase COP00_11170 2cc7f47a57baed57f6b54043d6e7e9c2 362 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 255 345 1.2E-7 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase COP00_11170 2cc7f47a57baed57f6b54043d6e7e9c2 362 PIRSF PIRSF037431 7 354 3.9E-128 T 13-10-2018 IPR017202 Sensor histidine kinase LiaS/VraS GO:0000155|GO:0000160|GO:0004673|GO:0016021 COP00_11170 2cc7f47a57baed57f6b54043d6e7e9c2 362 SUPERFAMILY SSF55874 225 345 1.57E-16 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily COP00_11170 2cc7f47a57baed57f6b54043d6e7e9c2 362 Pfam PF07730 Histidine kinase 150 218 1.1E-17 T 13-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 COP00_11170 2cc7f47a57baed57f6b54043d6e7e9c2 362 Gene3D G3DSA:3.30.565.10 216 350 7.0E-30 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily COP00_11170 2cc7f47a57baed57f6b54043d6e7e9c2 362 SMART SM00304 74 126 1.8E-7 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 COP00_11170 2cc7f47a57baed57f6b54043d6e7e9c2 362 SUPERFAMILY SSF158472 77 123 3.53E-5 T 13-10-2018 COP00_11170 2cc7f47a57baed57f6b54043d6e7e9c2 362 Gene3D G3DSA:1.20.1480.50 52 132 9.1E-6 T 13-10-2018 COP00_19010 d5601589f4a61c35e77a6ac4cf0117f9 237 SUPERFAMILY SSF53474 5 228 1.63E-37 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold COP00_19010 d5601589f4a61c35e77a6ac4cf0117f9 237 PIRSF PIRSF017388 1 231 7.6E-52 T 13-10-2018 IPR012354 Esterase/lipase GO:0052689 COP00_19010 d5601589f4a61c35e77a6ac4cf0117f9 237 Gene3D G3DSA:3.40.50.1820 3 228 1.0E-48 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold COP00_19010 d5601589f4a61c35e77a6ac4cf0117f9 237 Pfam PF12146 Serine aminopeptidase, S33 5 213 2.3E-16 T 13-10-2018 IPR022742 Serine aminopeptidase, S33 COP00_13185 b072d6d6ce15a2bad78a67e3181b7cbb 443 SMART SM00984 314 416 2.8E-40 T 13-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 COP00_13185 b072d6d6ce15a2bad78a67e3181b7cbb 443 Gene3D G3DSA:3.40.50.720 1 197 1.7E-75 T 13-10-2018 COP00_13185 b072d6d6ce15a2bad78a67e3181b7cbb 443 PIRSF PIRSF000124 2 431 7.4E-144 T 13-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 COP00_13185 b072d6d6ce15a2bad78a67e3181b7cbb 443 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 199 291 2.0E-40 T 13-10-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 COP00_13185 b072d6d6ce15a2bad78a67e3181b7cbb 443 SUPERFAMILY SSF52413 300 426 4.71E-34 T 13-10-2018 IPR036220 UDP-glucose/GDP-mannose dehydrogenase, C-terminal domain superfamily Reactome: R-HSA-173599 COP00_13185 b072d6d6ce15a2bad78a67e3181b7cbb 443 SUPERFAMILY SSF48179 199 296 3.2E-34 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 COP00_13185 b072d6d6ce15a2bad78a67e3181b7cbb 443 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 3 185 1.0E-68 T 13-10-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 COP00_13185 b072d6d6ce15a2bad78a67e3181b7cbb 443 Gene3D G3DSA:3.40.50.720 230 442 3.9E-75 T 13-10-2018 COP00_13185 b072d6d6ce15a2bad78a67e3181b7cbb 443 Gene3D G3DSA:1.20.5.100 198 229 2.1E-19 T 13-10-2018 COP00_13185 b072d6d6ce15a2bad78a67e3181b7cbb 443 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 315 414 3.6E-28 T 13-10-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 COP00_13185 b072d6d6ce15a2bad78a67e3181b7cbb 443 PIRSF PIRSF500134 2 434 1.2E-176 T 13-10-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 COP00_13185 b072d6d6ce15a2bad78a67e3181b7cbb 443 SUPERFAMILY SSF51735 2 193 1.32E-50 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily COP00_13185 b072d6d6ce15a2bad78a67e3181b7cbb 443 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 3 412 8.7E-141 T 13-10-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 COP00_23380 4729940755f1a5dfb0050b9f5a0dc5e2 74 ProDom PD057197 SPORE COAT CAPSID D INNER D COTD SPORULATION 1 74 5.0E-35 T 13-10-2018 IPR020108 Spore coat protein CotD COP00_23380 4729940755f1a5dfb0050b9f5a0dc5e2 74 Pfam PF11122 Inner spore coat protein D 10 66 3.7E-15 T 13-10-2018 IPR020108 Spore coat protein CotD COP00_23090 4b9edfd9bf75bb1c5133318dd6dd6497 240 Pfam PF00756 Putative esterase 15 238 3.2E-56 T 13-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 COP00_23090 4b9edfd9bf75bb1c5133318dd6dd6497 240 SUPERFAMILY SSF53474 5 237 4.26E-37 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold COP00_23090 4b9edfd9bf75bb1c5133318dd6dd6497 240 Gene3D G3DSA:3.40.50.1820 2 240 3.3E-48 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold COP00_15685 5f084702917ba93a057a15f395c3cc0c 160 Pfam PF00583 Acetyltransferase (GNAT) family 59 149 1.3E-16 T 13-10-2018 IPR000182 GNAT domain COP00_15685 5f084702917ba93a057a15f395c3cc0c 160 Gene3D G3DSA:3.40.630.30 6 160 1.4E-42 T 13-10-2018 COP00_15685 5f084702917ba93a057a15f395c3cc0c 160 SUPERFAMILY SSF55729 9 153 1.7E-25 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase COP00_15030 1d9abbd4073420a4e8fb8df666c512c1 331 Gene3D G3DSA:3.40.50.720 3 247 5.7E-91 T 13-10-2018 COP00_15030 1d9abbd4073420a4e8fb8df666c512c1 331 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 3 322 6.7E-90 T 13-10-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 COP00_15030 1d9abbd4073420a4e8fb8df666c512c1 331 Gene3D G3DSA:3.90.25.10 172 302 5.7E-91 T 13-10-2018 COP00_15030 1d9abbd4073420a4e8fb8df666c512c1 331 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 247 1.6E-49 T 13-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 COP00_15030 1d9abbd4073420a4e8fb8df666c512c1 331 SUPERFAMILY SSF51735 1 323 7.13E-71 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily COP00_13240 bb86b37e26792a0d44bc633052b77052 271 Pfam PF01061 ABC-2 type transporter 18 229 2.0E-27 T 13-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 COP00_08915 fdf4419220678a96028a0ffc4a3cf978 426 SUPERFAMILY SSF53850 25 424 5.15E-60 T 13-10-2018 COP00_08915 fdf4419220678a96028a0ffc4a3cf978 426 Gene3D G3DSA:3.40.190.10 45 353 2.7E-63 T 13-10-2018 COP00_08915 fdf4419220678a96028a0ffc4a3cf978 426 Pfam PF01547 Bacterial extracellular solute-binding protein 39 324 1.9E-39 T 13-10-2018 IPR006059 Bacterial extracellular solute-binding protein COP00_08915 fdf4419220678a96028a0ffc4a3cf978 426 Gene3D G3DSA:3.40.190.10 141 408 2.7E-63 T 13-10-2018 COP00_06295 840c6aea92c214e5def84f32b41dfeb2 128 SUPERFAMILY SSF54593 2 127 1.79E-23 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase COP00_06295 840c6aea92c214e5def84f32b41dfeb2 128 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 2 124 9.0E-9 T 13-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain COP00_06295 840c6aea92c214e5def84f32b41dfeb2 128 Gene3D G3DSA:3.10.180.10 1 127 5.5E-36 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase COP00_03325 ee3eae29c383d6b806dd20822f44cf22 570 Gene3D G3DSA:1.10.530.10 6 154 4.0E-52 T 13-10-2018 COP00_03325 ee3eae29c383d6b806dd20822f44cf22 570 Gene3D G3DSA:3.55.50.40 287 375 1.3E-13 T 13-10-2018 COP00_03325 ee3eae29c383d6b806dd20822f44cf22 570 Pfam PF06605 Prophage endopeptidase tail 226 550 8.7E-69 T 13-10-2018 IPR010572 Prophage tail endopeptidase COP00_03325 ee3eae29c383d6b806dd20822f44cf22 570 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 12 150 5.7E-24 T 13-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 COP00_03325 ee3eae29c383d6b806dd20822f44cf22 570 Gene3D G3DSA:4.10.80.30 57 83 4.0E-52 T 13-10-2018 COP00_03325 ee3eae29c383d6b806dd20822f44cf22 570 PRINTS PR01002 Flagellar protein FlgJ signature 111 130 3.1E-6 T 13-10-2018 COP00_03325 ee3eae29c383d6b806dd20822f44cf22 570 PRINTS PR01002 Flagellar protein FlgJ signature 131 149 3.1E-6 T 13-10-2018 COP00_03325 ee3eae29c383d6b806dd20822f44cf22 570 PRINTS PR01002 Flagellar protein FlgJ signature 25 43 3.1E-6 T 13-10-2018 COP00_03325 ee3eae29c383d6b806dd20822f44cf22 570 SMART SM00047 2 154 3.4E-53 T 13-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 COP00_22945 ac453b65c2709a4e2cff119cddb57125 296 Gene3D G3DSA:3.30.2350.10 83 296 1.8E-65 T 13-10-2018 COP00_22945 ac453b65c2709a4e2cff119cddb57125 296 SUPERFAMILY SSF55120 75 295 3.84E-69 T 13-10-2018 IPR020103 Pseudouridine synthase, catalytic domain superfamily GO:0001522|GO:0003723|GO:0009451|GO:0009982 COP00_22945 ac453b65c2709a4e2cff119cddb57125 296 Pfam PF00849 RNA pseudouridylate synthase 91 241 3.2E-27 T 13-10-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 COP00_22945 ac453b65c2709a4e2cff119cddb57125 296 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 39 295 4.0E-71 T 13-10-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 COP00_11685 e466fd8aaec7683e07453bd2c44b9a33 427 TIGRFAM TIGR01554 major_cap_HK97: phage major capsid protein, HK97 family 24 400 5.0E-83 T 13-10-2018 IPR024455 Phage capsid COP00_11685 e466fd8aaec7683e07453bd2c44b9a33 427 SUPERFAMILY SSF56563 125 401 2.22E-49 T 13-10-2018 COP00_11685 e466fd8aaec7683e07453bd2c44b9a33 427 Gene3D G3DSA:3.30.2320.10 255 395 1.5E-9 T 13-10-2018 COP00_11685 e466fd8aaec7683e07453bd2c44b9a33 427 Gene3D G3DSA:3.30.2400.10 199 390 1.5E-9 T 13-10-2018 COP00_11685 e466fd8aaec7683e07453bd2c44b9a33 427 Pfam PF05065 Phage capsid family 133 399 3.9E-32 T 13-10-2018 IPR024455 Phage capsid COP00_11665 183e6ffbecb31dd26f9b4558840409e8 132 TIGRFAM TIGR01725 phge_HK97_gp10: phage protein, HK97 gp10 family 8 130 9.8E-17 T 13-10-2018 IPR010064 Bacteriophage HK97-gp10, putative tail-component COP00_11665 183e6ffbecb31dd26f9b4558840409e8 132 Pfam PF04883 Bacteriophage HK97-gp10, putative tail-component 11 97 2.3E-10 T 13-10-2018 IPR010064 Bacteriophage HK97-gp10, putative tail-component COP00_19045 d1dc925442575cd9d3000ff4a4feab83 386 Pfam PF01168 Alanine racemase, N-terminal domain 14 232 3.6E-68 T 13-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 COP00_19045 d1dc925442575cd9d3000ff4a4feab83 386 Gene3D G3DSA:2.40.37.10 14 369 4.7E-130 T 13-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 COP00_19045 d1dc925442575cd9d3000ff4a4feab83 386 Hamap MF_01201 Alanine racemase. 7 372 34.7 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 COP00_19045 d1dc925442575cd9d3000ff4a4feab83 386 Pfam PF00842 Alanine racemase, C-terminal domain 247 370 3.4E-45 T 13-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 COP00_19045 d1dc925442575cd9d3000ff4a4feab83 386 Gene3D G3DSA:3.20.20.10 16 237 4.7E-130 T 13-10-2018 IPR029066 PLP-binding barrel COP00_19045 d1dc925442575cd9d3000ff4a4feab83 386 SMART SM01005 247 372 1.5E-68 T 13-10-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 COP00_19045 d1dc925442575cd9d3000ff4a4feab83 386 SUPERFAMILY SSF50621 242 382 4.88E-50 T 13-10-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 COP00_19045 d1dc925442575cd9d3000ff4a4feab83 386 SUPERFAMILY SSF51419 14 245 8.83E-63 T 13-10-2018 IPR029066 PLP-binding barrel COP00_19045 d1dc925442575cd9d3000ff4a4feab83 386 PRINTS PR00992 Alanine racemase signature 300 317 5.1E-71 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 COP00_19045 d1dc925442575cd9d3000ff4a4feab83 386 PRINTS PR00992 Alanine racemase signature 33 49 5.1E-71 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 COP00_19045 d1dc925442575cd9d3000ff4a4feab83 386 PRINTS PR00992 Alanine racemase signature 69 87 5.1E-71 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 COP00_19045 d1dc925442575cd9d3000ff4a4feab83 386 PRINTS PR00992 Alanine racemase signature 130 142 5.1E-71 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 COP00_19045 d1dc925442575cd9d3000ff4a4feab83 386 PRINTS PR00992 Alanine racemase signature 280 295 5.1E-71 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 COP00_19045 d1dc925442575cd9d3000ff4a4feab83 386 PRINTS PR00992 Alanine racemase signature 205 232 5.1E-71 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 COP00_19045 d1dc925442575cd9d3000ff4a4feab83 386 PRINTS PR00992 Alanine racemase signature 354 367 5.1E-71 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 COP00_19045 d1dc925442575cd9d3000ff4a4feab83 386 PRINTS PR00992 Alanine racemase signature 165 176 5.1E-71 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 COP00_19045 d1dc925442575cd9d3000ff4a4feab83 386 PRINTS PR00992 Alanine racemase signature 263 278 5.1E-71 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 COP00_19045 d1dc925442575cd9d3000ff4a4feab83 386 TIGRFAM TIGR00492 alr: alanine racemase 8 372 3.3E-131 T 13-10-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 COP00_19045 d1dc925442575cd9d3000ff4a4feab83 386 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 38 48 - T 13-10-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 COP00_05815 0fdd97658c84ad6ee12d85c7af0349bb 263 SUPERFAMILY SSF56300 44 256 3.93E-31 T 13-10-2018 COP00_05815 0fdd97658c84ad6ee12d85c7af0349bb 263 Gene3D G3DSA:3.60.21.10 47 228 5.1E-18 T 13-10-2018 IPR029052 Metallo-dependent phosphatase-like COP00_05815 0fdd97658c84ad6ee12d85c7af0349bb 263 Pfam PF00149 Calcineurin-like phosphoesterase 48 203 2.0E-9 T 13-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 COP00_21465 cb85ff7382b93d5a768b51c7393f2ddb 160 TIGRFAM TIGR00185 tRNA_yibK_trmL: tRNA (cytidine(34)-2'-O)-methyltransferase 5 159 4.0E-72 T 13-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 COP00_21465 cb85ff7382b93d5a768b51c7393f2ddb 160 Gene3D G3DSA:3.40.1280.10 1 160 3.4E-68 T 13-10-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal COP00_21465 cb85ff7382b93d5a768b51c7393f2ddb 160 Pfam PF00588 SpoU rRNA Methylase family 6 148 1.3E-33 T 13-10-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 COP00_21465 cb85ff7382b93d5a768b51c7393f2ddb 160 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 6 157 34.434 T 13-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 COP00_21465 cb85ff7382b93d5a768b51c7393f2ddb 160 PIRSF PIRSF029256 5 160 1.1E-68 T 13-10-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 COP00_21465 cb85ff7382b93d5a768b51c7393f2ddb 160 SUPERFAMILY SSF75217 6 158 3.2E-45 T 13-10-2018 IPR029028 Alpha/beta knot methyltransferases COP00_06955 b7b87162c5c02feffe4c9f7c8e9ad78c 631 Pfam PF00884 Sulfatase 244 535 8.3E-37 T 13-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 COP00_06955 b7b87162c5c02feffe4c9f7c8e9ad78c 631 SUPERFAMILY SSF53649 242 620 3.27E-69 T 13-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 COP00_06955 b7b87162c5c02feffe4c9f7c8e9ad78c 631 Gene3D G3DSA:3.40.720.10 236 545 3.4E-76 T 13-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 COP00_06955 b7b87162c5c02feffe4c9f7c8e9ad78c 631 PIRSF PIRSF005091 1 619 1.4E-196 T 13-10-2018 IPR012160 Lipoteichoic acid synthase-like COP00_18055 09ee254650f70f06e92899f2f0b2faa7 293 Gene3D G3DSA:3.10.105.10 116 272 1.2E-118 T 13-10-2018 COP00_18055 09ee254650f70f06e92899f2f0b2faa7 293 SUPERFAMILY SSF53850 32 188 4.61E-49 T 13-10-2018 COP00_18055 09ee254650f70f06e92899f2f0b2faa7 293 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 190 293 1.4E-23 T 13-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 COP00_18055 09ee254650f70f06e92899f2f0b2faa7 293 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 30 172 4.6E-42 T 13-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 COP00_18055 09ee254650f70f06e92899f2f0b2faa7 293 Gene3D G3DSA:3.40.190.230 33 291 1.2E-118 T 13-10-2018 COP00_18055 09ee254650f70f06e92899f2f0b2faa7 293 SUPERFAMILY SSF53850 188 293 6.91E-29 T 13-10-2018 COP00_05625 01b3a6a6a88dbea9abd2af15a6e1b845 265 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 40 53 - T 13-10-2018 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 COP00_05625 01b3a6a6a88dbea9abd2af15a6e1b845 265 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 6 261 35.297 T 13-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 COP00_05625 01b3a6a6a88dbea9abd2af15a6e1b845 265 Gene3D G3DSA:3.20.20.70 3 261 6.6E-92 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 COP00_05625 01b3a6a6a88dbea9abd2af15a6e1b845 265 SUPERFAMILY SSF51366 5 237 3.3E-78 T 13-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 COP00_05625 01b3a6a6a88dbea9abd2af15a6e1b845 265 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 5 258 1.1E-96 T 13-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 COP00_05625 01b3a6a6a88dbea9abd2af15a6e1b845 265 Pfam PF00290 Tryptophan synthase alpha chain 5 254 1.7E-93 T 13-10-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 COP00_05430 95016ebebadb01f23c953ebb9d39564d 138 SUPERFAMILY SSF49764 45 137 1.19E-7 T 13-10-2018 IPR008978 HSP20-like chaperone COP00_05430 95016ebebadb01f23c953ebb9d39564d 138 Gene3D G3DSA:2.60.40.790 9 138 5.0E-10 T 13-10-2018 IPR008978 HSP20-like chaperone COP00_05995 b7c76f4956346fd080bd1ce232f40c08 145 Pfam PF00011 Hsp20/alpha crystallin family 42 142 3.3E-20 T 13-10-2018 IPR002068 Alpha crystallin/Hsp20 domain COP00_05995 b7c76f4956346fd080bd1ce232f40c08 145 Gene3D G3DSA:2.60.40.790 5 144 8.1E-37 T 13-10-2018 IPR008978 HSP20-like chaperone COP00_05995 b7c76f4956346fd080bd1ce232f40c08 145 SUPERFAMILY SSF49764 9 143 6.63E-36 T 13-10-2018 IPR008978 HSP20-like chaperone COP00_07285 d42454637c7852df89c99f3a4823466e 309 Pfam PF02690 Na+/Pi-cotransporter 164 250 2.5E-14 T 13-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 COP00_07285 d42454637c7852df89c99f3a4823466e 309 Pfam PF02690 Na+/Pi-cotransporter 13 146 1.5E-31 T 13-10-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 COP00_07285 d42454637c7852df89c99f3a4823466e 309 TIGRFAM TIGR00704 NaPi_cotrn_rel: Na/Pi-cotransporter II-related protein 1 307 5.3E-101 T 13-10-2018 IPR004633 Na/Pi-cotransporter II-related/YqeW-like protein GO:0016020 COP00_02990 e73e10636736a00f27b04eeda9258588 845 Pfam PF14890 Intein splicing domain 186 524 7.3E-16 T 13-10-2018 COP00_02990 e73e10636736a00f27b04eeda9258588 845 TIGRFAM TIGR01443 intein_Cterm: intein C-terminal splicing region 505 527 6.4E-7 T 13-10-2018 IPR030934 Intein C-terminal splicing region COP00_02990 e73e10636736a00f27b04eeda9258588 845 TIGRFAM TIGR01445 intein_Nterm: intein N-terminal splicing region 142 224 6.5E-15 T 13-10-2018 IPR006141 Intein N-terminal splicing region GO:0016539 Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 COP00_02990 e73e10636736a00f27b04eeda9258588 845 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 703 725 - T 13-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 COP00_02990 e73e10636736a00f27b04eeda9258588 845 SUPERFAMILY SSF51998 2 834 5.72E-134 T 13-10-2018 COP00_02990 e73e10636736a00f27b04eeda9258588 845 Gene3D G3DSA:3.20.70.20 3 143 4.9E-41 T 13-10-2018 COP00_02990 e73e10636736a00f27b04eeda9258588 845 PRINTS PR00379 Intein signature 503 520 2.0E-14 T 13-10-2018 IPR006142 Intein GO:0016539 COP00_02990 e73e10636736a00f27b04eeda9258588 845 PRINTS PR00379 Intein signature 370 382 2.0E-14 T 13-10-2018 IPR006142 Intein GO:0016539 COP00_02990 e73e10636736a00f27b04eeda9258588 845 PRINTS PR00379 Intein signature 402 417 2.0E-14 T 13-10-2018 IPR006142 Intein GO:0016539 COP00_02990 e73e10636736a00f27b04eeda9258588 845 PRINTS PR00379 Intein signature 211 224 2.0E-14 T 13-10-2018 IPR006142 Intein GO:0016539 COP00_02990 e73e10636736a00f27b04eeda9258588 845 PRINTS PR00379 Intein signature 261 273 2.0E-14 T 13-10-2018 IPR006142 Intein GO:0016539 COP00_02990 e73e10636736a00f27b04eeda9258588 845 Gene3D G3DSA:3.20.70.20 527 831 5.0E-97 T 13-10-2018 COP00_02990 e73e10636736a00f27b04eeda9258588 845 SMART SM00306 140 248 5.8E-21 T 13-10-2018 IPR003587 Hint domain N-terminal Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 COP00_02990 e73e10636736a00f27b04eeda9258588 845 Pfam PF02867 Ribonucleotide reductase, barrel domain 2 829 3.9E-108 T 13-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 COP00_02990 e73e10636736a00f27b04eeda9258588 845 SUPERFAMILY SSF55608 354 465 1.78E-16 T 13-10-2018 IPR027434 Homing endonuclease COP00_02990 e73e10636736a00f27b04eeda9258588 845 Gene3D G3DSA:1.10.1650.20 46 98 4.9E-41 T 13-10-2018 COP00_02990 e73e10636736a00f27b04eeda9258588 845 Pfam PF14528 LAGLIDADG-like domain 369 459 3.3E-13 T 13-10-2018 IPR004860 Homing endonuclease, LAGLIDADG GO:0004519 COP00_02990 e73e10636736a00f27b04eeda9258588 845 Gene3D G3DSA:3.10.28.10 258 434 2.9E-27 T 13-10-2018 IPR027434 Homing endonuclease COP00_02990 e73e10636736a00f27b04eeda9258588 845 SMART SM00305 488 532 1.5E-10 T 13-10-2018 IPR003586 Hint domain C-terminal Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 COP00_02990 e73e10636736a00f27b04eeda9258588 845 SUPERFAMILY SSF51294 142 527 2.94E-29 T 13-10-2018 IPR036844 Hint domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 COP00_01070 c5affec6f57acdcd97152a86e522ee52 164 Pfam PF13241 Putative NAD(P)-binding 5 111 4.1E-25 T 13-10-2018 COP00_01070 c5affec6f57acdcd97152a86e522ee52 164 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 2 160 1.3E-29 T 13-10-2018 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0055114 KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-7377 COP00_01070 c5affec6f57acdcd97152a86e522ee52 164 SUPERFAMILY SSF51735 1 107 9.77E-20 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily COP00_01070 c5affec6f57acdcd97152a86e522ee52 164 SUPERFAMILY SSF75615 105 160 6.15E-8 T 13-10-2018 COP00_01070 c5affec6f57acdcd97152a86e522ee52 164 Gene3D G3DSA:3.40.50.720 1 127 1.1E-37 T 13-10-2018 COP00_03305 0b03d76b70ba1a0ceabe7c1fb7dd42fb 205 TIGRFAM TIGR01603 maj_tail_phi13: phage major tail protein, phi13 family 8 185 5.3E-42 T 13-10-2018 IPR006490 Phage major tail protein, phi13 family COP00_03305 0b03d76b70ba1a0ceabe7c1fb7dd42fb 205 Pfam PF04630 Phage tail tube protein 43 185 3.8E-10 T 13-10-2018 IPR006724 Phage tail tube protein 1 COP00_11655 0b03d76b70ba1a0ceabe7c1fb7dd42fb 205 TIGRFAM TIGR01603 maj_tail_phi13: phage major tail protein, phi13 family 8 185 5.3E-42 T 13-10-2018 IPR006490 Phage major tail protein, phi13 family COP00_11655 0b03d76b70ba1a0ceabe7c1fb7dd42fb 205 Pfam PF04630 Phage tail tube protein 43 185 3.8E-10 T 13-10-2018 IPR006724 Phage tail tube protein 1 COP00_20225 58ccfb385239db5808d89b7bbbf7bfbf 346 Gene3D G3DSA:3.30.1330.10 1 167 7.1E-67 T 13-10-2018 IPR036921 PurM-like, N-terminal domain superfamily COP00_20225 58ccfb385239db5808d89b7bbbf7bfbf 346 Pfam PF02769 AIR synthase related protein, C-terminal domain 174 338 6.7E-36 T 13-10-2018 IPR010918 PurM-like, C-terminal domain COP00_20225 58ccfb385239db5808d89b7bbbf7bfbf 346 SUPERFAMILY SSF56042 168 339 1.33E-58 T 13-10-2018 IPR036676 PurM-like, C-terminal domain superfamily COP00_20225 58ccfb385239db5808d89b7bbbf7bfbf 346 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 3 343 47.703 T 13-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 COP00_20225 58ccfb385239db5808d89b7bbbf7bfbf 346 SUPERFAMILY SSF55326 4 166 4.93E-48 T 13-10-2018 IPR036921 PurM-like, N-terminal domain superfamily COP00_20225 58ccfb385239db5808d89b7bbbf7bfbf 346 Pfam PF00586 AIR synthase related protein, N-terminal domain 72 159 2.3E-16 T 13-10-2018 IPR016188 PurM-like, N-terminal domain COP00_20225 58ccfb385239db5808d89b7bbbf7bfbf 346 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 4 334 8.3E-148 T 13-10-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 COP00_20225 58ccfb385239db5808d89b7bbbf7bfbf 346 Gene3D G3DSA:3.90.650.10 168 344 2.1E-71 T 13-10-2018 IPR036676 PurM-like, C-terminal domain superfamily COP00_08045 f80c9430cd29e5b9974373ee4d81e26d 77 ProDom PD057834 YRHC TRANSMEMBRANE MEMBRANE 1 76 3.0E-30 T 13-10-2018 IPR025418 YrhC-like protein COP00_08045 f80c9430cd29e5b9974373ee4d81e26d 77 Pfam PF14143 YrhC-like protein 4 75 1.1E-28 T 13-10-2018 IPR025418 YrhC-like protein COP00_01245 145d84858742fb53e20bae4e2546e7dd 90 SUPERFAMILY SSF54565 2 86 7.59E-35 T 13-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_01245 145d84858742fb53e20bae4e2546e7dd 90 Pfam PF00886 Ribosomal protein S16 9 67 4.8E-26 T 13-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_01245 145d84858742fb53e20bae4e2546e7dd 90 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 2 77 25.195 T 13-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_01245 145d84858742fb53e20bae4e2546e7dd 90 ProSitePatterns PS00732 Ribosomal protein S16 signature. 3 12 - T 13-10-2018 IPR020592 Ribosomal protein S16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 COP00_01245 145d84858742fb53e20bae4e2546e7dd 90 TIGRFAM TIGR00002 S16: ribosomal protein bS16 3 80 4.1E-36 T 13-10-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_01245 145d84858742fb53e20bae4e2546e7dd 90 Gene3D G3DSA:3.30.1320.10 1 90 8.2E-38 T 13-10-2018 IPR023803 Ribosomal protein S16 domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_15875 a02ef3d7bcdd34db73aeff72eae363c3 282 SMART SM00470 24 113 4.7E-37 T 13-10-2018 IPR003115 ParB/Sulfiredoxin COP00_15875 a02ef3d7bcdd34db73aeff72eae363c3 282 SUPERFAMILY SSF109709 105 215 8.63E-36 T 13-10-2018 COP00_15875 a02ef3d7bcdd34db73aeff72eae363c3 282 Gene3D G3DSA:3.90.1530.30 37 99 7.2E-28 T 13-10-2018 COP00_15875 a02ef3d7bcdd34db73aeff72eae363c3 282 Gene3D G3DSA:1.10.10.2830 100 214 1.3E-37 T 13-10-2018 COP00_15875 a02ef3d7bcdd34db73aeff72eae363c3 282 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 20 197 7.2E-67 T 13-10-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 COP00_15875 a02ef3d7bcdd34db73aeff72eae363c3 282 SUPERFAMILY SSF110849 24 115 2.62E-28 T 13-10-2018 IPR036086 ParB/Sulfiredoxin superfamily COP00_15875 a02ef3d7bcdd34db73aeff72eae363c3 282 Pfam PF02195 ParB-like nuclease domain 24 112 3.9E-28 T 13-10-2018 IPR003115 ParB/Sulfiredoxin COP00_21685 f4d82f1e54ed699a2ac785ca33c76208 496 SUPERFAMILY SSF53067 254 492 6.26E-86 T 13-10-2018 COP00_21685 f4d82f1e54ed699a2ac785ca33c76208 496 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 3 493 5.1E-225 T 13-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 COP00_21685 f4d82f1e54ed699a2ac785ca33c76208 496 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 361 381 - T 13-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 COP00_21685 f4d82f1e54ed699a2ac785ca33c76208 496 Gene3D G3DSA:3.30.420.40 253 496 1.7E-90 T 13-10-2018 COP00_21685 f4d82f1e54ed699a2ac785ca33c76208 496 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 261 449 1.2E-64 T 13-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 COP00_21685 f4d82f1e54ed699a2ac785ca33c76208 496 PIRSF PIRSF000538 2 496 4.9E-181 T 13-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 COP00_21685 f4d82f1e54ed699a2ac785ca33c76208 496 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 4 251 9.1E-92 T 13-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 COP00_21685 f4d82f1e54ed699a2ac785ca33c76208 496 Hamap MF_00186 Glycerol kinase [glpK]. 2 496 59.718 T 13-10-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 COP00_21685 f4d82f1e54ed699a2ac785ca33c76208 496 Gene3D G3DSA:3.30.420.40 1 252 2.4E-113 T 13-10-2018 COP00_21685 f4d82f1e54ed699a2ac785ca33c76208 496 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 134 146 - T 13-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 COP00_21685 f4d82f1e54ed699a2ac785ca33c76208 496 SUPERFAMILY SSF53067 3 254 1.87E-98 T 13-10-2018 COP00_18345 36ea3c20043b7387b401c111b8bc285f 247 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 COP00_18345 36ea3c20043b7387b401c111b8bc285f 247 Pfam PF00005 ABC transporter 17 169 3.4E-34 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 COP00_18345 36ea3c20043b7387b401c111b8bc285f 247 Gene3D G3DSA:3.40.50.300 1 245 2.5E-75 T 13-10-2018 COP00_18345 36ea3c20043b7387b401c111b8bc285f 247 SUPERFAMILY SSF52540 1 239 2.59E-77 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_18345 36ea3c20043b7387b401c111b8bc285f 247 SMART SM00382 26 223 4.8E-14 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_18345 36ea3c20043b7387b401c111b8bc285f 247 PIRSF PIRSF039085 1 245 1.9E-113 T 13-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 COP00_11345 3a5069cd0169b6751273014c6e3091a9 377 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 201 221 - T 13-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site COP00_11345 3a5069cd0169b6751273014c6e3091a9 377 Gene3D G3DSA:3.90.1150.10 15 367 1.5E-84 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 COP00_11345 3a5069cd0169b6751273014c6e3091a9 377 SUPERFAMILY SSF53383 4 376 1.16E-73 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase COP00_11345 3a5069cd0169b6751273014c6e3091a9 377 Gene3D G3DSA:3.40.640.10 30 287 1.5E-84 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 COP00_11345 3a5069cd0169b6751273014c6e3091a9 377 Pfam PF00266 Aminotransferase class-V 52 366 1.6E-45 T 13-10-2018 IPR000192 Aminotransferase class V domain COP00_13720 c6622bfa0d81fce267775eff29a4e6a7 530 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 216 258 - T 13-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 COP00_13720 c6622bfa0d81fce267775eff29a4e6a7 530 SUPERFAMILY SSF53807 264 524 2.71E-39 T 13-10-2018 COP00_13720 c6622bfa0d81fce267775eff29a4e6a7 530 Gene3D G3DSA:1.10.10.2730 218 261 1.6E-15 T 13-10-2018 COP00_13720 c6622bfa0d81fce267775eff29a4e6a7 530 Gene3D G3DSA:3.40.50.1980 262 376 1.0E-6 T 13-10-2018 COP00_13720 c6622bfa0d81fce267775eff29a4e6a7 530 SMART SM00342 179 262 8.4E-26 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 COP00_13720 c6622bfa0d81fce267775eff29a4e6a7 530 Gene3D G3DSA:3.40.50.1980 379 528 3.1E-28 T 13-10-2018 COP00_13720 c6622bfa0d81fce267775eff29a4e6a7 530 SUPERFAMILY SSF46689 165 213 8.24E-7 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 COP00_13720 c6622bfa0d81fce267775eff29a4e6a7 530 Pfam PF12833 Helix-turn-helix domain 185 263 3.6E-18 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 COP00_13720 c6622bfa0d81fce267775eff29a4e6a7 530 SUPERFAMILY SSF46689 216 266 2.46E-11 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 COP00_13720 c6622bfa0d81fce267775eff29a4e6a7 530 Gene3D G3DSA:1.10.10.60 162 216 3.1E-11 T 13-10-2018 COP00_13720 c6622bfa0d81fce267775eff29a4e6a7 530 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 231 246 1.6E-5 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 COP00_13720 c6622bfa0d81fce267775eff29a4e6a7 530 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 246 262 1.6E-5 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 COP00_13720 c6622bfa0d81fce267775eff29a4e6a7 530 Pfam PF01497 Periplasmic binding protein 290 503 1.7E-20 T 13-10-2018 IPR002491 ABC transporter periplasmic binding domain COP00_02800 af5646c9e7b35514da28e812fd486eaf 270 SUPERFAMILY SSF56091 2 182 6.3E-39 T 13-10-2018 COP00_02800 af5646c9e7b35514da28e812fd486eaf 270 Gene3D G3DSA:3.30.1490.70 11 181 2.9E-43 T 13-10-2018 COP00_02800 af5646c9e7b35514da28e812fd486eaf 270 ProSitePatterns PS00697 ATP-dependent DNA ligase AMP-binding site. 23 31 - T 13-10-2018 IPR016059 DNA ligase, ATP-dependent, conserved site GO:0003909|GO:0051103 COP00_02800 af5646c9e7b35514da28e812fd486eaf 270 Pfam PF01068 ATP dependent DNA ligase domain 15 182 2.4E-29 T 13-10-2018 IPR012310 DNA ligase, ATP-dependent, central GO:0003910|GO:0005524|GO:0006281|GO:0006310 COP00_02800 af5646c9e7b35514da28e812fd486eaf 270 Gene3D G3DSA:3.30.470.30 28 139 2.9E-43 T 13-10-2018 COP00_12100 e8850f46f85a7aea536cc237ad1ced1a 437 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 10 434 2.5E-128 T 13-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 COP00_12100 e8850f46f85a7aea536cc237ad1ced1a 437 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 415 422 - T 13-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 COP00_12100 e8850f46f85a7aea536cc237ad1ced1a 437 PRINTS PR00045 Sigma-54 factor signature 410 428 5.0E-23 T 13-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 COP00_12100 e8850f46f85a7aea536cc237ad1ced1a 437 PRINTS PR00045 Sigma-54 factor signature 351 362 5.0E-23 T 13-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 COP00_12100 e8850f46f85a7aea536cc237ad1ced1a 437 PRINTS PR00045 Sigma-54 factor signature 335 347 5.0E-23 T 13-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 COP00_12100 e8850f46f85a7aea536cc237ad1ced1a 437 PRINTS PR00045 Sigma-54 factor signature 147 164 5.0E-23 T 13-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 COP00_12100 e8850f46f85a7aea536cc237ad1ced1a 437 Pfam PF04552 Sigma-54, DNA binding domain 276 435 4.2E-57 T 13-10-2018 IPR007634 RNA polymerase sigma factor 54, DNA-binding COP00_12100 e8850f46f85a7aea536cc237ad1ced1a 437 PIRSF PIRSF000774 1 437 1.5E-116 T 13-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 COP00_12100 e8850f46f85a7aea536cc237ad1ced1a 437 Pfam PF04963 Sigma-54 factor, core binding domain 79 262 7.1E-47 T 13-10-2018 IPR007046 RNA polymerase sigma factor 54, core-binding domain GO:0003677|GO:0006352 COP00_12100 e8850f46f85a7aea536cc237ad1ced1a 437 Gene3D G3DSA:1.10.10.60 375 434 1.9E-21 T 13-10-2018 COP00_12100 e8850f46f85a7aea536cc237ad1ced1a 437 Gene3D G3DSA:1.10.10.1330 80 216 3.1E-25 T 13-10-2018 IPR038709 RNA polymerase sigma-54 factor, core-binding domain superfamily COP00_12100 e8850f46f85a7aea536cc237ad1ced1a 437 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 6 49 9.1E-13 T 13-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 COP00_12100 e8850f46f85a7aea536cc237ad1ced1a 437 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 323 342 - T 13-10-2018 IPR000394 RNA polymerase sigma factor 54 GO:0001216|GO:0016987 COP00_09085 d27aee421bb27e17f8ab3114f0fb7258 312 Gene3D G3DSA:3.90.110.10 150 310 9.1E-61 T 13-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 COP00_09085 d27aee421bb27e17f8ab3114f0fb7258 312 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 7 147 6.7E-42 T 13-10-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 COP00_09085 d27aee421bb27e17f8ab3114f0fb7258 312 SUPERFAMILY SSF51735 3 147 3.87E-48 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily COP00_09085 d27aee421bb27e17f8ab3114f0fb7258 312 PRINTS PR00086 L-lactate dehydrogenase signature 175 188 5.0E-31 T 13-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 COP00_09085 d27aee421bb27e17f8ab3114f0fb7258 312 PRINTS PR00086 L-lactate dehydrogenase signature 33 57 5.0E-31 T 13-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 COP00_09085 d27aee421bb27e17f8ab3114f0fb7258 312 PRINTS PR00086 L-lactate dehydrogenase signature 7 31 5.0E-31 T 13-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 COP00_09085 d27aee421bb27e17f8ab3114f0fb7258 312 PRINTS PR00086 L-lactate dehydrogenase signature 121 141 5.0E-31 T 13-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 COP00_09085 d27aee421bb27e17f8ab3114f0fb7258 312 PRINTS PR00086 L-lactate dehydrogenase signature 145 163 5.0E-31 T 13-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 COP00_09085 d27aee421bb27e17f8ab3114f0fb7258 312 Hamap MF_00487 Malate dehydrogenase [mdh]. 5 312 46.693 T 13-10-2018 IPR011275 Malate dehydrogenase, type 3 GO:0016616|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 COP00_09085 d27aee421bb27e17f8ab3114f0fb7258 312 Gene3D G3DSA:3.40.50.720 1 149 2.5E-60 T 13-10-2018 COP00_09085 d27aee421bb27e17f8ab3114f0fb7258 312 TIGRFAM TIGR01763 MalateDH_bact: malate dehydrogenase, NAD-dependent 5 311 5.8E-169 T 13-10-2018 IPR011275 Malate dehydrogenase, type 3 GO:0016616|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 COP00_09085 d27aee421bb27e17f8ab3114f0fb7258 312 SUPERFAMILY SSF56327 151 309 4.32E-53 T 13-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 COP00_09085 d27aee421bb27e17f8ab3114f0fb7258 312 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 151 309 1.1E-28 T 13-10-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 COP00_09085 d27aee421bb27e17f8ab3114f0fb7258 312 PIRSF PIRSF000102 2 311 3.3E-104 T 13-10-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 COP00_08530 482554c5f5b90a5e5fc10bd2d6cf3ae1 431 Gene3D G3DSA:3.40.640.10 72 319 9.3E-186 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 COP00_08530 482554c5f5b90a5e5fc10bd2d6cf3ae1 431 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 6 426 5.2E-204 T 13-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 COP00_08530 482554c5f5b90a5e5fc10bd2d6cf3ae1 431 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 237 273 - T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 COP00_08530 482554c5f5b90a5e5fc10bd2d6cf3ae1 431 Pfam PF00202 Aminotransferase class-III 34 396 7.1E-75 T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 COP00_08530 482554c5f5b90a5e5fc10bd2d6cf3ae1 431 SUPERFAMILY SSF53383 4 425 7.08E-131 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase COP00_08530 482554c5f5b90a5e5fc10bd2d6cf3ae1 431 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 6 427 105.094 T 13-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 COP00_08530 482554c5f5b90a5e5fc10bd2d6cf3ae1 431 Gene3D G3DSA:3.90.1150.10 10 421 9.3E-186 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 COP00_06155 79aec772ee463c80f77f853bda237dcd 185 Pfam PF00293 NUDIX domain 42 156 3.4E-18 T 13-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 COP00_06155 79aec772ee463c80f77f853bda237dcd 185 SUPERFAMILY SSF55811 7 177 3.25E-49 T 13-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 COP00_06155 79aec772ee463c80f77f853bda237dcd 185 Gene3D G3DSA:3.90.79.10 3 184 6.2E-57 T 13-10-2018 COP00_06155 79aec772ee463c80f77f853bda237dcd 185 PRINTS PR00502 NUDIX hydrolase family signature 86 101 2.4E-5 T 13-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 COP00_06155 79aec772ee463c80f77f853bda237dcd 185 PRINTS PR00502 NUDIX hydrolase family signature 72 86 2.4E-5 T 13-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 COP00_06155 79aec772ee463c80f77f853bda237dcd 185 ProSitePatterns PS00893 Nudix box signature. 77 98 - T 13-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 COP00_13400 c52d80c6fd497a32c8ad32643a655d14 293 Pfam PF00294 pfkB family carbohydrate kinase 1 284 4.1E-73 T 13-10-2018 IPR011611 Carbohydrate kinase PfkB COP00_13400 c52d80c6fd497a32c8ad32643a655d14 293 SUPERFAMILY SSF53613 1 291 6.08E-78 T 13-10-2018 IPR029056 Ribokinase-like COP00_13400 c52d80c6fd497a32c8ad32643a655d14 293 PRINTS PR00990 Ribokinase signature 6 27 3.6E-34 T 13-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 COP00_13400 c52d80c6fd497a32c8ad32643a655d14 293 PRINTS PR00990 Ribokinase signature 207 218 3.6E-34 T 13-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 COP00_13400 c52d80c6fd497a32c8ad32643a655d14 293 PRINTS PR00990 Ribokinase signature 33 52 3.6E-34 T 13-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 COP00_13400 c52d80c6fd497a32c8ad32643a655d14 293 PRINTS PR00990 Ribokinase signature 172 187 3.6E-34 T 13-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 COP00_13400 c52d80c6fd497a32c8ad32643a655d14 293 PRINTS PR00990 Ribokinase signature 104 117 3.6E-34 T 13-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 COP00_13400 c52d80c6fd497a32c8ad32643a655d14 293 Gene3D G3DSA:3.40.1190.20 1 293 5.2E-91 T 13-10-2018 IPR029056 Ribokinase-like COP00_13400 c52d80c6fd497a32c8ad32643a655d14 293 Hamap MF_01987 Ribokinase [rbsK]. 2 291 24.141 T 13-10-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 COP00_13400 c52d80c6fd497a32c8ad32643a655d14 293 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 236 249 - T 13-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 COP00_13400 c52d80c6fd497a32c8ad32643a655d14 293 TIGRFAM TIGR02152 D_ribokin_bact: ribokinase 4 289 3.6E-103 T 13-10-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 COP00_19705 f3b05eab3b9b4a2cc1f43d4c284337c4 427 Gene3D G3DSA:3.30.2320.10 254 395 1.3E-9 T 13-10-2018 COP00_19705 f3b05eab3b9b4a2cc1f43d4c284337c4 427 Gene3D G3DSA:3.30.2400.10 206 390 1.3E-9 T 13-10-2018 COP00_19705 f3b05eab3b9b4a2cc1f43d4c284337c4 427 Pfam PF05065 Phage capsid family 133 399 2.5E-32 T 13-10-2018 IPR024455 Phage capsid COP00_19705 f3b05eab3b9b4a2cc1f43d4c284337c4 427 TIGRFAM TIGR01554 major_cap_HK97: phage major capsid protein, HK97 family 24 400 2.5E-83 T 13-10-2018 IPR024455 Phage capsid COP00_19705 f3b05eab3b9b4a2cc1f43d4c284337c4 427 SUPERFAMILY SSF56563 125 401 3.27E-49 T 13-10-2018 COP00_20150 9f82f6a6a91a7cb86bc664982f6b8bcc 403 Pfam PF01882 Protein of unknown function DUF58 204 275 4.1E-19 T 13-10-2018 IPR002881 Domain of unknown function DUF58 COP00_13560 c3cfd0a86e776a59f644ab089c012063 333 Gene3D G3DSA:3.90.640.10 178 251 1.1E-127 T 13-10-2018 COP00_13560 c3cfd0a86e776a59f644ab089c012063 333 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 2 327 4.1E-137 T 13-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 COP00_13560 c3cfd0a86e776a59f644ab089c012063 333 SUPERFAMILY SSF53067 142 325 5.64E-50 T 13-10-2018 COP00_13560 c3cfd0a86e776a59f644ab089c012063 333 Gene3D G3DSA:3.30.420.40 146 309 1.1E-127 T 13-10-2018 COP00_13560 c3cfd0a86e776a59f644ab089c012063 333 Pfam PF06723 MreB/Mbl protein 4 327 1.4E-150 T 13-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 COP00_13560 c3cfd0a86e776a59f644ab089c012063 333 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 41 59 6.3E-59 T 13-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 COP00_13560 c3cfd0a86e776a59f644ab089c012063 333 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 124 143 6.3E-59 T 13-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 COP00_13560 c3cfd0a86e776a59f644ab089c012063 333 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 179 199 6.3E-59 T 13-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 COP00_13560 c3cfd0a86e776a59f644ab089c012063 333 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 61 84 6.3E-59 T 13-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 COP00_13560 c3cfd0a86e776a59f644ab089c012063 333 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 292 318 6.3E-59 T 13-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 COP00_13560 c3cfd0a86e776a59f644ab089c012063 333 Gene3D G3DSA:3.30.420.40 6 319 1.1E-127 T 13-10-2018 COP00_13560 c3cfd0a86e776a59f644ab089c012063 333 SUPERFAMILY SSF53067 3 140 1.65E-39 T 13-10-2018 COP00_18565 ac509074f16077b2147d87406f5cbeeb 229 Gene3D G3DSA:1.10.10.10 121 229 2.1E-36 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_18565 ac509074f16077b2147d87406f5cbeeb 229 SMART SM00862 151 226 6.4E-29 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 COP00_18565 ac509074f16077b2147d87406f5cbeeb 229 Pfam PF00072 Response regulator receiver domain 3 112 9.8E-25 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 COP00_18565 ac509074f16077b2147d87406f5cbeeb 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 156 226 4.2E-28 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 COP00_18565 ac509074f16077b2147d87406f5cbeeb 229 SUPERFAMILY SSF52172 1 126 8.68E-38 T 13-10-2018 IPR011006 CheY-like superfamily COP00_18565 ac509074f16077b2147d87406f5cbeeb 229 SMART SM00448 1 111 6.2E-40 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 COP00_18565 ac509074f16077b2147d87406f5cbeeb 229 Gene3D G3DSA:3.40.50.2300 1 120 2.0E-34 T 13-10-2018 COP00_18565 ac509074f16077b2147d87406f5cbeeb 229 SUPERFAMILY SSF46894 128 227 2.01E-30 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 COP00_17560 de7666577b58f4e04f091f994d608ae8 733 Pfam PF01471 Putative peptidoglycan binding domain 93 135 8.0E-8 T 13-10-2018 IPR002477 Peptidoglycan binding-like COP00_17560 de7666577b58f4e04f091f994d608ae8 733 Pfam PF01471 Putative peptidoglycan binding domain 223 275 7.6E-13 T 13-10-2018 IPR002477 Peptidoglycan binding-like COP00_17560 de7666577b58f4e04f091f994d608ae8 733 SUPERFAMILY SSF51445 287 478 2.53E-41 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily COP00_17560 de7666577b58f4e04f091f994d608ae8 733 Gene3D G3DSA:1.10.101.10 205 282 5.6E-12 T 13-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 COP00_17560 de7666577b58f4e04f091f994d608ae8 733 SUPERFAMILY SSF47090 78 138 5.49E-9 T 13-10-2018 IPR036365 PGBD-like superfamily COP00_17560 de7666577b58f4e04f091f994d608ae8 733 Pfam PF08924 Domain of unknown function (DUF1906) 298 432 1.8E-38 T 13-10-2018 IPR015020 Protein of unknown function DUF1906 COP00_17560 de7666577b58f4e04f091f994d608ae8 733 SUPERFAMILY SSF47090 210 276 5.34E-15 T 13-10-2018 IPR036365 PGBD-like superfamily COP00_17560 de7666577b58f4e04f091f994d608ae8 733 Gene3D G3DSA:1.10.101.10 81 139 1.3E-7 T 13-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 COP00_17560 de7666577b58f4e04f091f994d608ae8 733 Gene3D G3DSA:3.20.20.80 283 502 1.2E-56 T 13-10-2018 COP00_05225 73f89e2d4a5e04b9f7fc64d9b0bf5aef 522 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 4 511 1.4E-190 T 13-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 COP00_05225 73f89e2d4a5e04b9f7fc64d9b0bf5aef 522 Gene3D G3DSA:3.30.160.270 411 514 4.3E-8 T 13-10-2018 COP00_05225 73f89e2d4a5e04b9f7fc64d9b0bf5aef 522 Gene3D G3DSA:3.20.20.70 1 280 8.4E-104 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 COP00_05225 73f89e2d4a5e04b9f7fc64d9b0bf5aef 522 Pfam PF08502 LeuA allosteric (dimerisation) domain 397 513 5.2E-28 T 13-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 COP00_05225 73f89e2d4a5e04b9f7fc64d9b0bf5aef 522 Pfam PF00682 HMGL-like 5 277 2.0E-89 T 13-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 COP00_05225 73f89e2d4a5e04b9f7fc64d9b0bf5aef 522 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 203 216 - T 13-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 COP00_05225 73f89e2d4a5e04b9f7fc64d9b0bf5aef 522 SMART SM00917 374 514 5.1E-29 T 13-10-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 COP00_05225 73f89e2d4a5e04b9f7fc64d9b0bf5aef 522 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 2 522 39.7 T 13-10-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 COP00_05225 73f89e2d4a5e04b9f7fc64d9b0bf5aef 522 SUPERFAMILY SSF110921 415 513 5.36E-19 T 13-10-2018 IPR036230 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain superfamily KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 COP00_05225 73f89e2d4a5e04b9f7fc64d9b0bf5aef 522 Gene3D G3DSA:1.10.238.260 284 402 5.1E-31 T 13-10-2018 COP00_05225 73f89e2d4a5e04b9f7fc64d9b0bf5aef 522 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 12 28 - T 13-10-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 COP00_05225 73f89e2d4a5e04b9f7fc64d9b0bf5aef 522 SUPERFAMILY SSF51569 1 295 1.83E-90 T 13-10-2018 COP00_00605 25f215785ceb2ef715e053403a6d61ba 153 Pfam PF00583 Acetyltransferase (GNAT) family 43 129 5.5E-6 T 13-10-2018 IPR000182 GNAT domain COP00_00605 25f215785ceb2ef715e053403a6d61ba 153 Gene3D G3DSA:3.40.630.30 2 148 4.4E-11 T 13-10-2018 COP00_00605 25f215785ceb2ef715e053403a6d61ba 153 SUPERFAMILY SSF55729 4 151 7.57E-15 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase COP00_14310 f6cf5e7bb821c5c19919a73bf018bb41 664 SUPERFAMILY SSF56235 86 215 2.76E-13 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal COP00_14310 f6cf5e7bb821c5c19919a73bf018bb41 664 Gene3D G3DSA:3.60.20.10 71 213 8.4E-12 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal COP00_14310 f6cf5e7bb821c5c19919a73bf018bb41 664 Pfam PF00733 Asparagine synthase 231 573 7.1E-19 T 13-10-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 COP00_14310 f6cf5e7bb821c5c19919a73bf018bb41 664 SUPERFAMILY SSF52402 226 583 1.26E-26 T 13-10-2018 COP00_14145 a3226da57953c1ed67c305f2e89fd655 259 Gene3D G3DSA:1.10.10.10 5 78 1.7E-19 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_14145 a3226da57953c1ed67c305f2e89fd655 259 SUPERFAMILY SSF55781 69 256 3.14E-45 T 13-10-2018 COP00_14145 a3226da57953c1ed67c305f2e89fd655 259 Pfam PF09339 IclR helix-turn-helix domain 13 64 4.2E-13 T 13-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 COP00_14145 a3226da57953c1ed67c305f2e89fd655 259 Gene3D G3DSA:3.30.450.40 80 258 2.7E-51 T 13-10-2018 IPR029016 GAF-like domain superfamily COP00_14145 a3226da57953c1ed67c305f2e89fd655 259 SUPERFAMILY SSF46785 12 82 5.88E-15 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_14145 a3226da57953c1ed67c305f2e89fd655 259 Pfam PF01614 Bacterial transcriptional regulator 131 251 1.6E-30 T 13-10-2018 IPR014757 Transcription regulator IclR, C-terminal COP00_14145 a3226da57953c1ed67c305f2e89fd655 259 SMART SM00346 11 101 7.9E-16 T 13-10-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 COP00_07015 ac39ed8292078ccc59be5e3213f016a7 259 SUPERFAMILY SSF52540 14 246 1.42E-57 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_07015 ac39ed8292078ccc59be5e3213f016a7 259 Gene3D G3DSA:3.40.50.300 13 255 7.0E-62 T 13-10-2018 COP00_07015 ac39ed8292078ccc59be5e3213f016a7 259 SMART SM00382 37 230 1.4E-11 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_07015 ac39ed8292078ccc59be5e3213f016a7 259 Pfam PF00005 ABC transporter 28 184 8.6E-33 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 COP00_07015 ac39ed8292078ccc59be5e3213f016a7 259 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 13 259 4.2E-120 T 13-10-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 COP00_07015 ac39ed8292078ccc59be5e3213f016a7 259 ProSitePatterns PS00211 ABC transporters family signature. 156 170 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 COP00_23640 963e06283c8698b5217e70e2d6c417e1 167 Gene3D G3DSA:1.10.10.10 92 165 9.4E-15 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_23640 963e06283c8698b5217e70e2d6c417e1 167 Pfam PF08281 Sigma-70, region 4 104 153 5.7E-13 T 13-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 COP00_23640 963e06283c8698b5217e70e2d6c417e1 167 SUPERFAMILY SSF88659 104 160 4.36E-13 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like COP00_23640 963e06283c8698b5217e70e2d6c417e1 167 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 69 158 1.8E-14 T 13-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 COP00_04965 bbcb3ae240677340515dd60c398291bf 232 Gene3D G3DSA:2.40.40.10 25 132 2.6E-26 T 13-10-2018 IPR036908 RlpA-like domain superfamily COP00_04965 bbcb3ae240677340515dd60c398291bf 232 SUPERFAMILY SSF50685 22 137 6.98E-18 T 13-10-2018 IPR036908 RlpA-like domain superfamily COP00_04965 bbcb3ae240677340515dd60c398291bf 232 Gene3D G3DSA:2.60.40.760 133 226 1.4E-35 T 13-10-2018 IPR036749 Expansin, cellulose-binding-like domain superfamily COP00_04965 bbcb3ae240677340515dd60c398291bf 232 SUPERFAMILY SSF49590 136 217 5.1E-15 T 13-10-2018 IPR036749 Expansin, cellulose-binding-like domain superfamily COP00_04965 bbcb3ae240677340515dd60c398291bf 232 Pfam PF03330 Lytic transglycolase 77 127 2.9E-6 T 13-10-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain COP00_23230 a7c37b9da0819d7cb29a3592d5808568 291 Gene3D G3DSA:3.40.190.290 94 290 1.6E-32 T 13-10-2018 COP00_23230 a7c37b9da0819d7cb29a3592d5808568 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 1.8E-9 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 COP00_23230 a7c37b9da0819d7cb29a3592d5808568 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 1.8E-9 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 COP00_23230 a7c37b9da0819d7cb29a3592d5808568 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 1.8E-9 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 COP00_23230 a7c37b9da0819d7cb29a3592d5808568 291 SUPERFAMILY SSF46785 2 114 7.57E-22 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_23230 a7c37b9da0819d7cb29a3592d5808568 291 Gene3D G3DSA:1.10.10.10 2 85 4.7E-24 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_23230 a7c37b9da0819d7cb29a3592d5808568 291 SUPERFAMILY SSF53850 92 288 1.21E-29 T 13-10-2018 COP00_23230 a7c37b9da0819d7cb29a3592d5808568 291 Pfam PF03466 LysR substrate binding domain 92 285 2.0E-32 T 13-10-2018 IPR005119 LysR, substrate-binding COP00_23230 a7c37b9da0819d7cb29a3592d5808568 291 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 2.3E-20 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 COP00_13715 13c37a9641b38a495cc1cbf084c1eb37 317 SUPERFAMILY SSF53807 43 309 7.85E-58 T 13-10-2018 COP00_13715 13c37a9641b38a495cc1cbf084c1eb37 317 Gene3D G3DSA:3.40.50.1980 36 161 2.1E-29 T 13-10-2018 COP00_13715 13c37a9641b38a495cc1cbf084c1eb37 317 Gene3D G3DSA:3.40.50.1980 162 317 1.3E-43 T 13-10-2018 COP00_13715 13c37a9641b38a495cc1cbf084c1eb37 317 Pfam PF01497 Periplasmic binding protein 96 287 1.1E-31 T 13-10-2018 IPR002491 ABC transporter periplasmic binding domain COP00_01600 eb67ba2d280d8a489cb353f5068f5620 319 PIRSF PIRSF004491 2 318 5.7E-107 T 13-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 COP00_01600 eb67ba2d280d8a489cb353f5068f5620 319 Gene3D G3DSA:2.40.30.30 188 318 6.7E-42 T 13-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 COP00_01600 eb67ba2d280d8a489cb353f5068f5620 319 Pfam PF01687 Riboflavin kinase 186 310 1.3E-36 T 13-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 COP00_01600 eb67ba2d280d8a489cb353f5068f5620 319 Gene3D G3DSA:3.40.50.620 6 187 2.3E-56 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold COP00_01600 eb67ba2d280d8a489cb353f5068f5620 319 SUPERFAMILY SSF52374 19 180 5.91E-28 T 13-10-2018 COP00_01600 eb67ba2d280d8a489cb353f5068f5620 319 SMART SM00904 185 312 4.7E-62 T 13-10-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26|MetaCyc: PWY-5523|MetaCyc: PWY-6168|MetaCyc: PWY-7863|Reactome: R-HSA-196843 COP00_01600 eb67ba2d280d8a489cb353f5068f5620 319 Pfam PF06574 FAD synthetase 16 169 2.6E-49 T 13-10-2018 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 COP00_01600 eb67ba2d280d8a489cb353f5068f5620 319 SUPERFAMILY SSF82114 176 315 3.71E-46 T 13-10-2018 IPR023465 Riboflavin kinase domain superfamily GO:0008531|GO:0009231 Reactome: R-HSA-196843 COP00_01600 eb67ba2d280d8a489cb353f5068f5620 319 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 21 312 3.8E-99 T 13-10-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 COP00_19310 8b009b79a56d15bb8a5b8628288f816d 125 Pfam PF08859 DGC domain 8 110 3.6E-32 T 13-10-2018 IPR014958 DGC COP00_19310 8b009b79a56d15bb8a5b8628288f816d 125 PIRSF PIRSF037181 1 122 2.1E-40 T 13-10-2018 IPR014958 DGC COP00_17225 036bfb469fa489ecc0536edc5a6b9595 628 Gene3D G3DSA:1.50.10.10 154 276 9.4E-6 T 13-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 COP00_17225 036bfb469fa489ecc0536edc5a6b9595 628 SUPERFAMILY SSF48208 122 484 1.57E-84 T 13-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 COP00_17225 036bfb469fa489ecc0536edc5a6b9595 628 SUPERFAMILY SSF52833 1 92 8.2E-11 T 13-10-2018 IPR036249 Thioredoxin-like superfamily COP00_17225 036bfb469fa489ecc0536edc5a6b9595 628 PIRSF PIRSF006402 1 628 3.6E-201 T 13-10-2018 IPR024705 Spermatogenesis-associated protein 20 COP00_17225 036bfb469fa489ecc0536edc5a6b9595 628 Gene3D G3DSA:3.40.30.10 1 116 7.1E-37 T 13-10-2018 COP00_17225 036bfb469fa489ecc0536edc5a6b9595 628 Gene3D G3DSA:1.50.10.10 338 547 1.0E-8 T 13-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 COP00_17225 036bfb469fa489ecc0536edc5a6b9595 628 Pfam PF03190 Protein of unknown function, DUF255 1 108 4.4E-43 T 13-10-2018 IPR004879 Domain of unknown function DUF255 COP00_19465 648077caf242dd39896675346f1618ad 158 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 12 137 2.8E-47 T 13-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 COP00_19465 648077caf242dd39896675346f1618ad 158 Gene3D G3DSA:3.40.50.300 2 152 1.5E-41 T 13-10-2018 COP00_19465 648077caf242dd39896675346f1618ad 158 SUPERFAMILY SSF52540 25 119 2.72E-20 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_19465 648077caf242dd39896675346f1618ad 158 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 10 128 1.7E-37 T 13-10-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 COP00_07330 9b738449c09fc4aac56b717b82f16915 379 Pfam PF06969 HemN C-terminal domain 302 363 3.6E-12 T 13-10-2018 IPR010723 HemN, C-terminal COP00_07330 9b738449c09fc4aac56b717b82f16915 379 SUPERFAMILY SSF102114 3 376 2.09E-118 T 13-10-2018 COP00_07330 9b738449c09fc4aac56b717b82f16915 379 Gene3D G3DSA:3.80.30.20 1 300 3.3E-105 T 13-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe COP00_07330 9b738449c09fc4aac56b717b82f16915 379 Pfam PF04055 Radical SAM superfamily 6 176 4.1E-23 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 COP00_07330 9b738449c09fc4aac56b717b82f16915 379 SMART SM00729 1 222 8.7E-62 T 13-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 COP00_07330 9b738449c09fc4aac56b717b82f16915 379 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 2 367 8.9E-155 T 13-10-2018 IPR004559 Oxygen-independent coproporphyrinogen III oxidase-like GO:0004109|GO:0005737|GO:0006779|GO:0055114 COP00_15150 a53cee775c9b8a0794817e8ec8bbb26c 611 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 465 585 8.7E-46 T 13-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 COP00_15150 a53cee775c9b8a0794817e8ec8bbb26c 611 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 527 539 - T 13-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 COP00_15150 a53cee775c9b8a0794817e8ec8bbb26c 611 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 464 588 2.2E-51 T 13-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 COP00_15150 a53cee775c9b8a0794817e8ec8bbb26c 611 Gene3D G3DSA:2.70.70.10 454 610 5.9E-57 T 13-10-2018 IPR011055 Duplicated hybrid motif COP00_15150 a53cee775c9b8a0794817e8ec8bbb26c 611 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 19 36 - T 13-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 COP00_15150 a53cee775c9b8a0794817e8ec8bbb26c 611 Pfam PF00367 phosphotransferase system, EIIB 8 41 1.1E-14 T 13-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 COP00_15150 a53cee775c9b8a0794817e8ec8bbb26c 611 SUPERFAMILY SSF55604 7 79 1.44E-21 T 13-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 COP00_15150 a53cee775c9b8a0794817e8ec8bbb26c 611 Gene3D G3DSA:3.30.1360.60 1 76 4.1E-27 T 13-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 COP00_15150 a53cee775c9b8a0794817e8ec8bbb26c 611 Pfam PF02378 Phosphotransferase system, EIIC 107 386 1.2E-37 T 13-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 COP00_15150 a53cee775c9b8a0794817e8ec8bbb26c 611 TIGRFAM TIGR01995 PTS-II-ABC-beta: PTS system, beta-glucoside-specific IIABC component 3 610 5.9E-226 T 13-10-2018 IPR011297 Phosphotransferase system, beta-glucoside-specific IIABC component GO:0005886|GO:0008982|GO:0009401 COP00_15150 a53cee775c9b8a0794817e8ec8bbb26c 611 SUPERFAMILY SSF51261 463 607 9.94E-54 T 13-10-2018 IPR011055 Duplicated hybrid motif COP00_12775 3211c54301d72c4390c31c62f9a7f73e 231 Gene3D G3DSA:1.10.10.10 2 90 5.4E-18 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_12775 3211c54301d72c4390c31c62f9a7f73e 231 SMART SM00418 9 88 1.1E-17 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 COP00_12775 3211c54301d72c4390c31c62f9a7f73e 231 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 59 74 1.2E-7 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 COP00_12775 3211c54301d72c4390c31c62f9a7f73e 231 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 11 26 1.2E-7 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 COP00_12775 3211c54301d72c4390c31c62f9a7f73e 231 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 44 59 1.2E-7 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 COP00_12775 3211c54301d72c4390c31c62f9a7f73e 231 Pfam PF12840 Helix-turn-helix domain 8 68 3.5E-11 T 13-10-2018 COP00_12775 3211c54301d72c4390c31c62f9a7f73e 231 SUPERFAMILY SSF46785 5 143 1.99E-19 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_07490 e0d5cbe14de6dcbd22ab070280b4990a 347 Gene3D G3DSA:2.60.40.650 230 337 1.8E-20 T 13-10-2018 COP00_07490 e0d5cbe14de6dcbd22ab070280b4990a 347 PRINTS PR00407 Eukaryotic molybdopterin domain signature 170 183 3.9E-13 T 13-10-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 COP00_07490 e0d5cbe14de6dcbd22ab070280b4990a 347 PRINTS PR00407 Eukaryotic molybdopterin domain signature 98 113 3.9E-13 T 13-10-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 COP00_07490 e0d5cbe14de6dcbd22ab070280b4990a 347 PRINTS PR00407 Eukaryotic molybdopterin domain signature 153 169 3.9E-13 T 13-10-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 COP00_07490 e0d5cbe14de6dcbd22ab070280b4990a 347 PRINTS PR00407 Eukaryotic molybdopterin domain signature 264 276 3.9E-13 T 13-10-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 COP00_07490 e0d5cbe14de6dcbd22ab070280b4990a 347 PRINTS PR00407 Eukaryotic molybdopterin domain signature 186 199 3.9E-13 T 13-10-2018 IPR008335 Eukaryotic molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-1614517 COP00_07490 e0d5cbe14de6dcbd22ab070280b4990a 347 SUPERFAMILY SSF81296 231 325 5.04E-21 T 13-10-2018 IPR014756 Immunoglobulin E-set COP00_07490 e0d5cbe14de6dcbd22ab070280b4990a 347 Gene3D G3DSA:3.90.420.10 3 223 3.2E-59 T 13-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 COP00_07490 e0d5cbe14de6dcbd22ab070280b4990a 347 Pfam PF00174 Oxidoreductase molybdopterin binding domain 42 205 1.7E-43 T 13-10-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 COP00_07490 e0d5cbe14de6dcbd22ab070280b4990a 347 SUPERFAMILY SSF56524 31 254 8.37E-54 T 13-10-2018 IPR036374 Oxidoreductase, molybdopterin-binding domain superfamily GO:0042128 Reactome: R-HSA-1614517 COP00_07490 e0d5cbe14de6dcbd22ab070280b4990a 347 Pfam PF03404 Mo-co oxidoreductase dimerisation domain 227 324 2.1E-7 T 13-10-2018 IPR005066 Moybdenum cofactor oxidoreductase, dimerisation GO:0016491|GO:0030151|GO:0055114 Reactome: R-HSA-1614517 COP00_01235 1871c77d2d11c8d51833b4597d47b5f1 107 Gene3D G3DSA:1.10.10.10 1 107 7.9E-38 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_01235 1871c77d2d11c8d51833b4597d47b5f1 107 SUPERFAMILY SSF88659 3 95 1.05E-33 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like COP00_01235 1871c77d2d11c8d51833b4597d47b5f1 107 Pfam PF04297 Putative helix-turn-helix protein, YlxM / p13 like 3 93 6.1E-42 T 13-10-2018 IPR007394 Putative helix-turn-helix protein, YlxM/p13-like COP00_01235 1871c77d2d11c8d51833b4597d47b5f1 107 Hamap MF_00245 UPF0122 protein . 3 103 21.81 T 13-10-2018 IPR007394 Putative helix-turn-helix protein, YlxM/p13-like COP00_17605 1c8f8b94b552cde968c5e84e33902be2 127 Pfam PF10710 Protein of unknown function (DUF2512) 1 120 6.4E-39 T 13-10-2018 IPR019649 Protein of unknown function DUF2512 COP00_15800 11e63cd2f6663dba2fde0f6fd0094a9d 455 SUPERFAMILY SSF55604 381 453 3.79E-20 T 13-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 COP00_15800 11e63cd2f6663dba2fde0f6fd0094a9d 455 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 394 411 - T 13-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 COP00_15800 11e63cd2f6663dba2fde0f6fd0094a9d 455 Pfam PF00367 phosphotransferase system, EIIB 384 416 2.5E-13 T 13-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 COP00_15800 11e63cd2f6663dba2fde0f6fd0094a9d 455 Pfam PF02378 Phosphotransferase system, EIIC 10 292 5.2E-66 T 13-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 COP00_15800 11e63cd2f6663dba2fde0f6fd0094a9d 455 Gene3D G3DSA:3.30.1360.60 381 455 9.2E-26 T 13-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 COP00_15800 11e63cd2f6663dba2fde0f6fd0094a9d 455 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 350 441 3.6E-22 T 13-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 COP00_15800 11e63cd2f6663dba2fde0f6fd0094a9d 455 TIGRFAM TIGR01998 PTS-II-BC-nag: PTS system, N-acetylglucosamine-specific IIBC component 1 452 3.5E-179 T 13-10-2018 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component GO:0008982|GO:0009401|GO:0015572|GO:0016021|GO:0019866 COP00_13310 e7f90394b0825f08c228d55f65e0c340 148 Pfam PF04055 Radical SAM superfamily 20 96 4.2E-9 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 COP00_13310 e7f90394b0825f08c228d55f65e0c340 148 PIRSF PIRSF000368 1 148 3.2E-52 T 13-10-2018 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 COP00_13310 e7f90394b0825f08c228d55f65e0c340 148 SUPERFAMILY SSF102114 22 96 3.53E-10 T 13-10-2018 COP00_13310 e7f90394b0825f08c228d55f65e0c340 148 TIGRFAM TIGR02491 NrdG: anaerobic ribonucleoside-triphosphate reductase activating protein 2 147 3.3E-56 T 13-10-2018 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 COP00_13310 e7f90394b0825f08c228d55f65e0c340 148 Pfam PF13353 4Fe-4S single cluster domain 12 145 3.0E-41 T 13-10-2018 COP00_13310 e7f90394b0825f08c228d55f65e0c340 148 Gene3D G3DSA:3.20.20.70 1 148 1.0E-34 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 COP00_13310 e7f90394b0825f08c228d55f65e0c340 148 ProSitePatterns PS01087 Radical activating enzymes signature. 14 35 - T 13-10-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 COP00_09825 c6ee294500b3fa81fcfccb3bcaef3382 81 Pfam PF01197 Ribosomal protein L31 1 79 1.5E-25 T 13-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 COP00_09825 c6ee294500b3fa81fcfccb3bcaef3382 81 Hamap MF_00502 50S ribosomal protein L31 type B [rpmE2]. 1 81 24.407 T 13-10-2018 IPR027493 Ribosomal protein L31 type B GO:0003735|GO:0005622|GO:0005840|GO:0006412 COP00_09825 c6ee294500b3fa81fcfccb3bcaef3382 81 PRINTS PR01249 Ribosomal protein L31 signature 45 60 3.4E-16 T 13-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 COP00_09825 c6ee294500b3fa81fcfccb3bcaef3382 81 PRINTS PR01249 Ribosomal protein L31 signature 2 19 3.4E-16 T 13-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 COP00_09825 c6ee294500b3fa81fcfccb3bcaef3382 81 PRINTS PR01249 Ribosomal protein L31 signature 60 78 3.4E-16 T 13-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 COP00_09825 c6ee294500b3fa81fcfccb3bcaef3382 81 ProSitePatterns PS01143 Ribosomal protein L31 signature. 49 70 - T 13-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 COP00_09825 c6ee294500b3fa81fcfccb3bcaef3382 81 SUPERFAMILY SSF143800 1 80 1.02E-21 T 13-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_09825 c6ee294500b3fa81fcfccb3bcaef3382 81 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 80 6.0E-18 T 13-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 COP00_09825 c6ee294500b3fa81fcfccb3bcaef3382 81 Gene3D G3DSA:2.30.170.50 1 81 2.7E-22 T 13-10-2018 COP00_11775 6013f6bb85b9d293f724aad9229705f4 329 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 2 18 8.2E-8 T 13-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 COP00_11775 6013f6bb85b9d293f724aad9229705f4 329 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 110 124 8.2E-8 T 13-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 COP00_11775 6013f6bb85b9d293f724aad9229705f4 329 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 152 165 8.2E-8 T 13-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 COP00_11775 6013f6bb85b9d293f724aad9229705f4 329 TIGRFAM TIGR00675 dcm: DNA (cytosine-5-)-methyltransferase 4 213 1.0E-31 T 13-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 COP00_11775 6013f6bb85b9d293f724aad9229705f4 329 SUPERFAMILY SSF53335 1 319 1.73E-55 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase COP00_11775 6013f6bb85b9d293f724aad9229705f4 329 Pfam PF00145 C-5 cytosine-specific DNA methylase 1 211 3.1E-41 T 13-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 COP00_11775 6013f6bb85b9d293f724aad9229705f4 329 Gene3D G3DSA:3.40.50.150 1 215 1.3E-47 T 13-10-2018 COP00_11775 6013f6bb85b9d293f724aad9229705f4 329 ProSitePatterns PS00094 C-5 cytosine-specific DNA methylases active site. 72 84 - T 13-10-2018 IPR018117 DNA methylase, C-5 cytosine-specific, active site KEGG: 00270+2.1.1.37|Reactome: R-HSA-212300|Reactome: R-HSA-4655427|Reactome: R-HSA-5334118 COP00_17620 535167bf25369f054eef6f1953aaf49f 463 Pfam PF00367 phosphotransferase system, EIIB 388 420 1.2E-12 T 13-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 COP00_17620 535167bf25369f054eef6f1953aaf49f 463 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 398 415 - T 13-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 COP00_17620 535167bf25369f054eef6f1953aaf49f 463 SUPERFAMILY SSF55604 385 459 1.09E-19 T 13-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 COP00_17620 535167bf25369f054eef6f1953aaf49f 463 Gene3D G3DSA:3.30.1360.60 381 462 8.4E-24 T 13-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 COP00_17620 535167bf25369f054eef6f1953aaf49f 463 Pfam PF02378 Phosphotransferase system, EIIC 9 297 3.9E-55 T 13-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 COP00_17620 535167bf25369f054eef6f1953aaf49f 463 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 362 445 6.5E-13 T 13-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 COP00_08200 e536246a8d565b0c291cd918048b397d 421 Gene3D G3DSA:1.10.3710.10 331 421 4.1E-25 T 13-10-2018 COP00_08200 e536246a8d565b0c291cd918048b397d 421 SUPERFAMILY SSF48019 237 419 1.3E-73 T 13-10-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 COP00_08200 e536246a8d565b0c291cd918048b397d 421 Gene3D G3DSA:3.40.50.300 1 147 8.2E-38 T 13-10-2018 COP00_08200 e536246a8d565b0c291cd918048b397d 421 Pfam PF16193 AAA C-terminal domain 172 251 1.8E-27 T 13-10-2018 IPR032423 AAA C-terminal domain COP00_08200 e536246a8d565b0c291cd918048b397d 421 Pfam PF12002 MgsA AAA+ ATPase C terminal 252 417 1.5E-66 T 13-10-2018 IPR021886 MgsA AAA+ ATPase C-terminal COP00_08200 e536246a8d565b0c291cd918048b397d 421 Gene3D G3DSA:1.10.8.60 149 224 1.5E-19 T 13-10-2018 COP00_08200 e536246a8d565b0c291cd918048b397d 421 SUPERFAMILY SSF52540 2 227 4.63E-39 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_08200 e536246a8d565b0c291cd918048b397d 421 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 45 64 4.3E-5 T 13-10-2018 COP00_08200 e536246a8d565b0c291cd918048b397d 421 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 282 298 4.3E-5 T 13-10-2018 COP00_08200 e536246a8d565b0c291cd918048b397d 421 Gene3D G3DSA:1.20.272.10 227 330 9.0E-43 T 13-10-2018 COP00_08200 e536246a8d565b0c291cd918048b397d 421 SMART SM00382 37 149 2.2E-9 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_08200 e536246a8d565b0c291cd918048b397d 421 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 7 127 3.7E-15 T 13-10-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 COP00_08585 f5025f73de252cf9dc7ae9c78ef7027c 424 Gene3D G3DSA:1.10.3120.10 117 423 3.5E-96 T 13-10-2018 IPR037041 Trigger factor, C-terminal domain superfamily GO:0006457|GO:0015031 COP00_08585 f5025f73de252cf9dc7ae9c78ef7027c 424 Hamap MF_00303 Trigger factor [tig]. 1 424 23.914 T 13-10-2018 IPR005215 Trigger factor GO:0015031 COP00_08585 f5025f73de252cf9dc7ae9c78ef7027c 424 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 159 239 4.2E-15 T 13-10-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain COP00_08585 f5025f73de252cf9dc7ae9c78ef7027c 424 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 264 422 7.0E-49 T 13-10-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 COP00_08585 f5025f73de252cf9dc7ae9c78ef7027c 424 SUPERFAMILY SSF54534 89 243 3.14E-37 T 13-10-2018 COP00_08585 f5025f73de252cf9dc7ae9c78ef7027c 424 SUPERFAMILY SSF102735 1 129 5.89E-39 T 13-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 COP00_08585 f5025f73de252cf9dc7ae9c78ef7027c 424 SUPERFAMILY SSF109998 250 423 7.98E-43 T 13-10-2018 IPR027304 Trigger factor/SurA domain superfamily COP00_08585 f5025f73de252cf9dc7ae9c78ef7027c 424 PIRSF PIRSF003095 1 424 8.6E-141 T 13-10-2018 IPR005215 Trigger factor GO:0015031 COP00_08585 f5025f73de252cf9dc7ae9c78ef7027c 424 Pfam PF05697 Bacterial trigger factor protein (TF) 1 144 4.5E-45 T 13-10-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 COP00_08585 f5025f73de252cf9dc7ae9c78ef7027c 424 Gene3D G3DSA:3.30.70.1050 1 116 2.3E-32 T 13-10-2018 IPR036611 Trigger factor ribosome-binding domain superfamily GO:0006457|GO:0015031 COP00_08585 f5025f73de252cf9dc7ae9c78ef7027c 424 Gene3D G3DSA:3.10.50.40 151 248 3.5E-96 T 13-10-2018 COP00_08585 f5025f73de252cf9dc7ae9c78ef7027c 424 TIGRFAM TIGR00115 tig: trigger factor 12 421 8.5E-144 T 13-10-2018 IPR005215 Trigger factor GO:0015031 COP00_08120 c975692c8bb39c9f37f1d8473d349425 139 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 4 135 4.3E-57 T 13-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 COP00_08120 c975692c8bb39c9f37f1d8473d349425 139 Gene3D G3DSA:3.30.420.140 1 139 2.9E-50 T 13-10-2018 IPR037027 YqgF/RNase H-like domain superfamily GO:0006139 COP00_08120 c975692c8bb39c9f37f1d8473d349425 139 SMART SM00732 1 103 2.3E-38 T 13-10-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 COP00_08120 c975692c8bb39c9f37f1d8473d349425 139 SUPERFAMILY SSF53098 1 138 2.88E-44 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily COP00_08120 c975692c8bb39c9f37f1d8473d349425 139 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 1 138 27.425 T 13-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 COP00_08120 c975692c8bb39c9f37f1d8473d349425 139 Pfam PF03652 Holliday junction resolvase 1 136 1.6E-43 T 13-10-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 COP00_01270 56ed557562b54002b72b480fc4c948ac 115 PIRSF PIRSF002191 1 115 3.3E-53 T 13-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_01270 56ed557562b54002b72b480fc4c948ac 115 Gene3D G3DSA:2.30.30.790 2 115 1.5E-15 T 13-10-2018 IPR038657 Ribosomal protein L19 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_01270 56ed557562b54002b72b480fc4c948ac 115 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 2 113 1.1E-52 T 13-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_01270 56ed557562b54002b72b480fc4c948ac 115 SUPERFAMILY SSF50104 2 114 3.51E-50 T 13-10-2018 IPR008991 Translation protein SH3-like domain superfamily COP00_01270 56ed557562b54002b72b480fc4c948ac 115 PRINTS PR00061 Ribosomal protein L19 signature 4 33 9.8E-43 T 13-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_01270 56ed557562b54002b72b480fc4c948ac 115 PRINTS PR00061 Ribosomal protein L19 signature 34 63 9.8E-43 T 13-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_01270 56ed557562b54002b72b480fc4c948ac 115 PRINTS PR00061 Ribosomal protein L19 signature 88 113 9.8E-43 T 13-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_01270 56ed557562b54002b72b480fc4c948ac 115 Pfam PF01245 Ribosomal protein L19 4 112 9.8E-55 T 13-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_01270 56ed557562b54002b72b480fc4c948ac 115 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 2 114 33.175 T 13-10-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_01270 56ed557562b54002b72b480fc4c948ac 115 ProSitePatterns PS01015 Ribosomal protein L19 signature. 86 101 - T 13-10-2018 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 COP00_00480 deb0300ea36ff84542a213f66a196e1b 539 SMART SM00382 26 228 2.4E-13 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_00480 deb0300ea36ff84542a213f66a196e1b 539 SMART SM00382 344 520 0.77 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_00480 deb0300ea36ff84542a213f66a196e1b 539 Gene3D G3DSA:3.40.50.300 282 537 4.0E-41 T 13-10-2018 COP00_00480 deb0300ea36ff84542a213f66a196e1b 539 Pfam PF00005 ABC transporter 18 184 1.8E-21 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 COP00_00480 deb0300ea36ff84542a213f66a196e1b 539 Gene3D G3DSA:3.40.50.300 2 279 1.4E-56 T 13-10-2018 COP00_00480 deb0300ea36ff84542a213f66a196e1b 539 Pfam PF12848 ABC transporter 224 309 1.0E-19 T 13-10-2018 IPR032781 ABC-transporter extension domain COP00_00480 deb0300ea36ff84542a213f66a196e1b 539 SUPERFAMILY SSF52540 6 237 9.5E-44 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_00480 deb0300ea36ff84542a213f66a196e1b 539 Pfam PF00005 ABC transporter 335 468 5.1E-14 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 COP00_00480 deb0300ea36ff84542a213f66a196e1b 539 SUPERFAMILY SSF52540 296 527 8.63E-36 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_03315 e3fad2429ac0f4a32baaa97803d3dbb6 1489 TIGRFAM TIGR01760 tape_meas_TP901: phage tail tape measure protein, TP901 family, core region 167 506 7.6E-87 T 13-10-2018 IPR010090 Phage tail tape measure protein COP00_03315 e3fad2429ac0f4a32baaa97803d3dbb6 1489 Pfam PF01464 Transglycosylase SLT domain 1248 1342 9.9E-16 T 13-10-2018 IPR008258 Transglycosylase SLT domain 1 COP00_03315 e3fad2429ac0f4a32baaa97803d3dbb6 1489 SUPERFAMILY SSF53955 1231 1380 5.63E-17 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily COP00_03315 e3fad2429ac0f4a32baaa97803d3dbb6 1489 Gene3D G3DSA:1.10.530.10 1229 1376 7.1E-10 T 13-10-2018 COP00_03315 e3fad2429ac0f4a32baaa97803d3dbb6 1489 Pfam PF10145 Phage-related minor tail protein 207 405 3.0E-51 T 13-10-2018 IPR010090 Phage tail tape measure protein COP00_17795 7a67d18a011068b31a3902afd4613af5 315 SUPERFAMILY SSF103481 59 158 1.57E-9 T 13-10-2018 COP00_17795 7a67d18a011068b31a3902afd4613af5 315 Pfam PF00892 EamA-like transporter family 170 308 2.6E-19 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 COP00_17795 7a67d18a011068b31a3902afd4613af5 315 Pfam PF00892 EamA-like transporter family 24 156 1.4E-15 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 COP00_17795 7a67d18a011068b31a3902afd4613af5 315 SUPERFAMILY SSF103481 233 312 1.7E-9 T 13-10-2018 COP00_23165 45f495388f7250ef31e9583cb07eb3a8 120 SUPERFAMILY SSF54593 1 117 5.64E-19 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase COP00_23165 45f495388f7250ef31e9583cb07eb3a8 120 Gene3D G3DSA:3.10.180.10 1 119 4.3E-30 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase COP00_23165 45f495388f7250ef31e9583cb07eb3a8 120 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 6 116 9.6E-12 T 13-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain COP00_16555 cb5fae6643d0664dadc93d322938c7a4 231 SUPERFAMILY SSF53448 3 222 5.41E-62 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases COP00_16555 cb5fae6643d0664dadc93d322938c7a4 231 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 5 222 1.3E-79 T 13-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 COP00_16555 cb5fae6643d0664dadc93d322938c7a4 231 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 2 222 42.452 T 13-10-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 COP00_16555 cb5fae6643d0664dadc93d322938c7a4 231 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 5 223 9.1E-84 T 13-10-2018 IPR034683 Cytidylyltransferase IspD/TarI GO:0070567 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 COP00_16555 cb5fae6643d0664dadc93d322938c7a4 231 Gene3D G3DSA:3.90.550.10 1 231 2.5E-83 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases COP00_16555 cb5fae6643d0664dadc93d322938c7a4 231 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 100 107 - T 13-10-2018 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 COP00_03430 6fca3f19d4483614ad7e34f39caf5e88 133 Pfam PF17094 Uncharacterised protein family (UPF0715) 12 124 5.4E-22 T 13-10-2018 IPR031374 Uncharacterised protein family UPF0715 COP00_03430 6fca3f19d4483614ad7e34f39caf5e88 133 ProDom PD015812 YOPD YWLA YOAG 12 125 6.0E-9 T 13-10-2018 IPR031374 Uncharacterised protein family UPF0715 COP00_22750 cf1074ba0f99869c8be6275dc03f089d 312 SUPERFAMILY SSF53671 9 311 1.83E-113 T 13-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 COP00_22750 cf1074ba0f99869c8be6275dc03f089d 312 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 13 311 9.6E-135 T 13-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 COP00_22750 cf1074ba0f99869c8be6275dc03f089d 312 Gene3D G3DSA:3.40.50.1370 14 307 2.8E-126 T 13-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 COP00_22750 cf1074ba0f99869c8be6275dc03f089d 312 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 12 312 82.052 T 13-10-2018 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 COP00_22750 cf1074ba0f99869c8be6275dc03f089d 312 Gene3D G3DSA:3.40.50.1370 139 298 2.8E-126 T 13-10-2018 IPR036901 Aspartate/ornithine carbamoyltransferase superfamily GO:0006520|GO:0016597|GO:0016743 COP00_22750 cf1074ba0f99869c8be6275dc03f089d 312 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 54 61 - T 13-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 COP00_22750 cf1074ba0f99869c8be6275dc03f089d 312 PRINTS PR00102 Ornithine carbamoyltransferase signature 85 98 3.0E-30 T 13-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 COP00_22750 cf1074ba0f99869c8be6275dc03f089d 312 PRINTS PR00102 Ornithine carbamoyltransferase signature 125 139 3.0E-30 T 13-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 COP00_22750 cf1074ba0f99869c8be6275dc03f089d 312 PRINTS PR00102 Ornithine carbamoyltransferase signature 228 238 3.0E-30 T 13-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 COP00_22750 cf1074ba0f99869c8be6275dc03f089d 312 PRINTS PR00102 Ornithine carbamoyltransferase signature 52 66 3.0E-30 T 13-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 COP00_22750 cf1074ba0f99869c8be6275dc03f089d 312 PRINTS PR00102 Ornithine carbamoyltransferase signature 290 301 3.0E-30 T 13-10-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-1268020|Reactome: R-HSA-70635 COP00_22750 cf1074ba0f99869c8be6275dc03f089d 312 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 13 149 1.2E-54 T 13-10-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 COP00_22750 cf1074ba0f99869c8be6275dc03f089d 312 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 54 73 6.9E-27 T 13-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 COP00_22750 cf1074ba0f99869c8be6275dc03f089d 312 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 136 147 6.9E-27 T 13-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 COP00_22750 cf1074ba0f99869c8be6275dc03f089d 312 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 264 273 6.9E-27 T 13-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 COP00_22750 cf1074ba0f99869c8be6275dc03f089d 312 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 276 299 6.9E-27 T 13-10-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 COP00_22750 cf1074ba0f99869c8be6275dc03f089d 312 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 155 309 1.5E-59 T 13-10-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 COP00_08905 a83f0a68a2865b5d19ccf131bde32453 279 Gene3D G3DSA:1.10.3720.10 1 270 2.7E-57 T 13-10-2018 IPR035906 MetI-like superfamily COP00_08905 a83f0a68a2865b5d19ccf131bde32453 279 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 95 272 3.6E-19 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 COP00_08905 a83f0a68a2865b5d19ccf131bde32453 279 SUPERFAMILY SSF161098 7 279 1.03E-65 T 13-10-2018 IPR035906 MetI-like superfamily COP00_04870 36f9f5d406fa2a75ec0c3845a83ed4cb 314 Pfam PF00248 Aldo/keto reductase family 14 305 2.2E-74 T 13-10-2018 IPR023210 NADP-dependent oxidoreductase domain COP00_04870 36f9f5d406fa2a75ec0c3845a83ed4cb 314 SUPERFAMILY SSF51430 1 309 9.43E-97 T 13-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily COP00_04870 36f9f5d406fa2a75ec0c3845a83ed4cb 314 PRINTS PR00069 Aldo-keto reductase signature 106 124 9.0E-10 T 13-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 COP00_04870 36f9f5d406fa2a75ec0c3845a83ed4cb 314 PRINTS PR00069 Aldo-keto reductase signature 40 64 9.0E-10 T 13-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 COP00_04870 36f9f5d406fa2a75ec0c3845a83ed4cb 314 PRINTS PR00069 Aldo-keto reductase signature 137 154 9.0E-10 T 13-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 COP00_04870 36f9f5d406fa2a75ec0c3845a83ed4cb 314 Gene3D G3DSA:3.20.20.100 1 313 4.9E-112 T 13-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily COP00_13810 4c0dcf2d4c0a1bd6fbac2d6d70f0347e 502 SUPERFAMILY SSF52540 95 370 2.05E-98 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_13810 4c0dcf2d4c0a1bd6fbac2d6d70f0347e 502 SUPERFAMILY SSF47917 372 499 7.32E-49 T 13-10-2018 COP00_13810 4c0dcf2d4c0a1bd6fbac2d6d70f0347e 502 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 499 51.545 T 13-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 COP00_13810 4c0dcf2d4c0a1bd6fbac2d6d70f0347e 502 Gene3D G3DSA:2.40.30.20 1 93 5.5E-37 T 13-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 COP00_13810 4c0dcf2d4c0a1bd6fbac2d6d70f0347e 502 SUPERFAMILY SSF50615 10 94 1.14E-30 T 13-10-2018 IPR036121 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 COP00_13810 4c0dcf2d4c0a1bd6fbac2d6d70f0347e 502 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 3 499 2.2E-262 T 13-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 COP00_13810 4c0dcf2d4c0a1bd6fbac2d6d70f0347e 502 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 364 2.2E-72 T 13-10-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 COP00_13810 4c0dcf2d4c0a1bd6fbac2d6d70f0347e 502 Gene3D G3DSA:3.40.50.300 94 371 2.1E-127 T 13-10-2018 COP00_13810 4c0dcf2d4c0a1bd6fbac2d6d70f0347e 502 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 371 488 7.0E-48 T 13-10-2018 IPR000793 ATP synthase, alpha subunit, C-terminal GO:0015986 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 COP00_13810 4c0dcf2d4c0a1bd6fbac2d6d70f0347e 502 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 355 364 - T 13-10-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 COP00_13810 4c0dcf2d4c0a1bd6fbac2d6d70f0347e 502 PIRSF PIRSF039088 1 501 3.8E-251 T 13-10-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 COP00_13810 4c0dcf2d4c0a1bd6fbac2d6d70f0347e 502 Gene3D G3DSA:1.20.150.20 372 499 1.1E-52 T 13-10-2018 IPR038376 ATP synthase, alpha subunit, C-terminal domain superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 COP00_13810 4c0dcf2d4c0a1bd6fbac2d6d70f0347e 502 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 27 92 7.3E-20 T 13-10-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0046034|GO:1902600 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 COP00_20890 0e4d1f04aad8bd39c0a129205b434795 367 Pfam PF00465 Iron-containing alcohol dehydrogenase 11 351 2.3E-65 T 13-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 COP00_20890 0e4d1f04aad8bd39c0a129205b434795 367 Gene3D G3DSA:3.40.50.1970 5 162 3.9E-40 T 13-10-2018 COP00_20890 0e4d1f04aad8bd39c0a129205b434795 367 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 244 264 - T 13-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 COP00_20890 0e4d1f04aad8bd39c0a129205b434795 367 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 153 181 - T 13-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 COP00_20890 0e4d1f04aad8bd39c0a129205b434795 367 PIRSF PIRSF000112 1 363 8.8E-87 T 13-10-2018 IPR016205 Glycerol dehydrogenase GO:0016614|GO:0046872|GO:0055114 KEGG: 00564+1.1.1.261|MetaCyc: PWY-6349 COP00_20890 0e4d1f04aad8bd39c0a129205b434795 367 Gene3D G3DSA:1.20.1090.10 163 367 2.6E-76 T 13-10-2018 COP00_20890 0e4d1f04aad8bd39c0a129205b434795 367 SUPERFAMILY SSF56796 7 359 1.83E-88 T 13-10-2018 COP00_21200 751ce30d4610bc80ea13004b3a4d74af 326 SMART SM00382 35 240 4.8E-13 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_21200 751ce30d4610bc80ea13004b3a4d74af 326 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 234 298 5.1E-18 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 COP00_21200 751ce30d4610bc80ea13004b3a4d74af 326 ProSitePatterns PS00211 ABC transporters family signature. 155 169 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 COP00_21200 751ce30d4610bc80ea13004b3a4d74af 326 SUPERFAMILY SSF52540 6 253 4.97E-69 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_21200 751ce30d4610bc80ea13004b3a4d74af 326 Gene3D G3DSA:3.40.50.300 4 325 3.9E-102 T 13-10-2018 COP00_21200 751ce30d4610bc80ea13004b3a4d74af 326 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 232 318 3.8E-28 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 COP00_21200 751ce30d4610bc80ea13004b3a4d74af 326 Pfam PF00005 ABC transporter 27 182 5.6E-31 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 COP00_03970 206c343c2160e37416e3da86e9b9f576 571 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 249 409 3.7E-40 T 13-10-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 COP00_03970 206c343c2160e37416e3da86e9b9f576 571 Gene3D G3DSA:1.20.140.10 249 408 9.0E-133 T 13-10-2018 COP00_03970 206c343c2160e37416e3da86e9b9f576 571 Gene3D G3DSA:1.10.540.10 42 143 9.0E-133 T 13-10-2018 IPR037069 Acyl-CoA dehydrogenase/oxidase, N-terminal domain superfamily GO:0016627|GO:0050660|GO:0055114 COP00_03970 206c343c2160e37416e3da86e9b9f576 571 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 29 141 1.2E-26 T 13-10-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 COP00_03970 206c343c2160e37416e3da86e9b9f576 571 Gene3D G3DSA:1.20.140.10 411 571 6.6E-24 T 13-10-2018 COP00_03970 206c343c2160e37416e3da86e9b9f576 571 SUPERFAMILY SSF56645 23 260 2.36E-72 T 13-10-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain superfamily GO:0016627|GO:0055114 COP00_03970 206c343c2160e37416e3da86e9b9f576 571 SUPERFAMILY SSF47203 248 414 4.83E-46 T 13-10-2018 IPR036250 Acyl-CoA dehydrogenase-like, C-terminal GO:0016627|GO:0055114 COP00_03970 206c343c2160e37416e3da86e9b9f576 571 Gene3D G3DSA:2.40.110.10 144 248 9.0E-133 T 13-10-2018 COP00_03970 206c343c2160e37416e3da86e9b9f576 571 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 370 389 - T 13-10-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 COP00_03970 206c343c2160e37416e3da86e9b9f576 571 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 145 237 2.0E-25 T 13-10-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 COP00_02510 7b4aa48dfd8dd335da368ae81421fd38 91 SUPERFAMILY SSF47729 1 90 2.21E-34 T 13-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 COP00_02510 7b4aa48dfd8dd335da368ae81421fd38 91 Pfam PF00216 Bacterial DNA-binding protein 1 90 2.2E-36 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 COP00_02510 7b4aa48dfd8dd335da368ae81421fd38 91 Gene3D G3DSA:4.10.520.10 1 91 6.2E-39 T 13-10-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain superfamily GO:0003677 COP00_02510 7b4aa48dfd8dd335da368ae81421fd38 91 SMART SM00411 1 90 2.7E-44 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 COP00_02510 7b4aa48dfd8dd335da368ae81421fd38 91 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 4.9E-18 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 COP00_02510 7b4aa48dfd8dd335da368ae81421fd38 91 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 4.9E-18 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 COP00_02510 7b4aa48dfd8dd335da368ae81421fd38 91 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 4.9E-18 T 13-10-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 COP00_21610 49ba6ebf0c6cb1fe3a3755728cde0016 217 Gene3D G3DSA:1.10.3720.10 13 207 8.0E-33 T 13-10-2018 IPR035906 MetI-like superfamily COP00_21610 49ba6ebf0c6cb1fe3a3755728cde0016 217 SUPERFAMILY SSF161098 14 199 5.36E-40 T 13-10-2018 IPR035906 MetI-like superfamily COP00_21610 49ba6ebf0c6cb1fe3a3755728cde0016 217 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 31 205 1.3E-22 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 COP00_14190 3658db502135a254516207610963ae35 367 Pfam PF07730 Histidine kinase 176 241 5.0E-16 T 13-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 COP00_14190 3658db502135a254516207610963ae35 367 Gene3D G3DSA:3.30.565.10 250 366 1.2E-18 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily COP00_14190 3658db502135a254516207610963ae35 367 SUPERFAMILY SSF55874 256 365 1.95E-8 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily COP00_13500 752fb3b874d1607c0072dc3386824a2c 105 PIRSF PIRSF001223 1 100 2.3E-48 T 13-10-2018 IPR012010 Urease, gamma subunit GO:0009039|GO:0019627 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 COP00_13500 752fb3b874d1607c0072dc3386824a2c 105 SUPERFAMILY SSF54111 1 102 1.16E-42 T 13-10-2018 IPR036463 Urease, gamma subunit superfamily GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 COP00_13500 752fb3b874d1607c0072dc3386824a2c 105 Pfam PF00547 Urease, gamma subunit 1 99 7.8E-44 T 13-10-2018 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 COP00_13500 752fb3b874d1607c0072dc3386824a2c 105 Gene3D G3DSA:3.30.280.10 1 100 2.4E-45 T 13-10-2018 IPR036463 Urease, gamma subunit superfamily GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 COP00_13500 752fb3b874d1607c0072dc3386824a2c 105 ProDom PD002319 SUBUNIT GAMMA HYDROLASE UREASE UREA AMIDOHYDROLASE UREASE ALPHA GAMMA/BETA METAL-BINDING 9 99 3.0E-41 T 13-10-2018 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 COP00_13500 752fb3b874d1607c0072dc3386824a2c 105 Hamap MF_00739 Urease subunit gamma [ureA]. 1 100 32.715 T 13-10-2018 IPR012010 Urease, gamma subunit GO:0009039|GO:0019627 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 COP00_13500 752fb3b874d1607c0072dc3386824a2c 105 TIGRFAM TIGR00193 urease_gam: urease, gamma subunit 1 100 2.9E-53 T 13-10-2018 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 COP00_19335 887a61515634b686bc62502c03a3b32e 275 Gene3D G3DSA:3.40.50.1820 2 270 5.5E-46 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold COP00_19335 887a61515634b686bc62502c03a3b32e 275 Pfam PF00561 alpha/beta hydrolase fold 25 124 2.6E-15 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 COP00_19335 887a61515634b686bc62502c03a3b32e 275 SUPERFAMILY SSF53474 7 268 1.26E-31 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold COP00_09885 1164e978e0a3b62265f5852dec93a8d8 369 SMART SM00922 143 235 1.0E-21 T 13-10-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal COP00_09885 1164e978e0a3b62265f5852dec93a8d8 369 Gene3D G3DSA:3.30.390.10 9 359 1.0E-135 T 13-10-2018 IPR029017 Enolase-like, N-terminal COP00_09885 1164e978e0a3b62265f5852dec93a8d8 369 SUPERFAMILY SSF51604 125 359 1.15E-67 T 13-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily COP00_09885 1164e978e0a3b62265f5852dec93a8d8 369 Pfam PF13378 Enolase C-terminal domain-like 146 353 1.0E-46 T 13-10-2018 IPR029065 Enolase C-terminal domain-like COP00_09885 1164e978e0a3b62265f5852dec93a8d8 369 TIGRFAM TIGR01928 menC_lowGC/arch: o-succinylbenzoate synthase 10 334 8.9E-144 T 13-10-2018 IPR010197 o-Succinylbenzoate synthase, MenC type 2 GO:0009234|GO:0016829 KEGG: 00130+4.2.1.113|MetaCyc: PWY-5837 COP00_09885 1164e978e0a3b62265f5852dec93a8d8 369 Gene3D G3DSA:3.20.20.120 119 347 1.0E-135 T 13-10-2018 IPR036849 Enolase-like, C-terminal domain superfamily COP00_09885 1164e978e0a3b62265f5852dec93a8d8 369 SUPERFAMILY SSF54826 3 127 1.33E-31 T 13-10-2018 COP00_09885 1164e978e0a3b62265f5852dec93a8d8 369 Hamap MF_01933 o-succinylbenzoate synthase [menC]. 2 360 45.366 T 13-10-2018 IPR010197 o-Succinylbenzoate synthase, MenC type 2 GO:0009234|GO:0016829 KEGG: 00130+4.2.1.113|MetaCyc: PWY-5837 COP00_09885 1164e978e0a3b62265f5852dec93a8d8 369 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 15 126 1.5E-13 T 13-10-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain COP00_14630 fe98bc286e149d3171f6ed35b4b6f076 305 Hamap MF_01939 2-methylisocitrate lyase [prpB]. 11 295 45.325 T 13-10-2018 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 COP00_14630 fe98bc286e149d3171f6ed35b4b6f076 305 Pfam PF13714 Phosphoenolpyruvate phosphomutase 17 257 1.8E-51 T 13-10-2018 COP00_14630 fe98bc286e149d3171f6ed35b4b6f076 305 SUPERFAMILY SSF51621 7 293 4.08E-98 T 13-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 COP00_14630 fe98bc286e149d3171f6ed35b4b6f076 305 Gene3D G3DSA:3.20.20.60 1 301 5.0E-107 T 13-10-2018 COP00_14630 fe98bc286e149d3171f6ed35b4b6f076 305 ProSitePatterns PS00161 Isocitrate lyase signature. 126 131 - T 13-10-2018 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824 COP00_14630 fe98bc286e149d3171f6ed35b4b6f076 305 TIGRFAM TIGR02317 prpB: methylisocitrate lyase 15 294 1.3E-123 T 13-10-2018 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 COP00_15410 d17260818a014ff8d9a5cd261632e28c 120 Pfam PF06486 Protein of unknown function (DUF1093) 43 108 4.0E-8 T 13-10-2018 IPR006542 Protein of unknown function DUF1093 COP00_15410 d17260818a014ff8d9a5cd261632e28c 120 TIGRFAM TIGR01655 yxeA_fam: conserved hypothetical protein 1 117 2.2E-9 T 13-10-2018 IPR006542 Protein of unknown function DUF1093 COP00_15410 d17260818a014ff8d9a5cd261632e28c 120 Gene3D G3DSA:2.40.50.480 36 120 2.2E-18 T 13-10-2018 IPR036166 YxeA-like superfamily COP00_15410 d17260818a014ff8d9a5cd261632e28c 120 SUPERFAMILY SSF159121 40 120 2.35E-16 T 13-10-2018 IPR036166 YxeA-like superfamily COP00_08710 ae999c1c95f08bf5b9de9f7775f85cb6 74 Gene3D G3DSA:1.10.10.10 1 74 7.5E-30 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_08710 ae999c1c95f08bf5b9de9f7775f85cb6 74 Pfam PF00196 Bacterial regulatory proteins, luxR family 12 64 3.4E-24 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 COP00_08710 ae999c1c95f08bf5b9de9f7775f85cb6 74 SMART SM00421 9 66 3.9E-25 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 COP00_08710 ae999c1c95f08bf5b9de9f7775f85cb6 74 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 26 42 1.2E-12 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 COP00_08710 ae999c1c95f08bf5b9de9f7775f85cb6 74 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 42 54 1.2E-12 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 COP00_08710 ae999c1c95f08bf5b9de9f7775f85cb6 74 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 12 26 1.2E-12 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 COP00_08710 ae999c1c95f08bf5b9de9f7775f85cb6 74 SUPERFAMILY SSF46894 8 72 3.03E-23 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 COP00_08710 ae999c1c95f08bf5b9de9f7775f85cb6 74 ProSitePatterns PS00622 LuxR-type HTH domain signature. 26 53 - T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 COP00_11810 ce131a8f420f65ed75becaed05b7e343 277 Gene3D G3DSA:3.40.50.300 64 260 1.2E-31 T 13-10-2018 COP00_11810 ce131a8f420f65ed75becaed05b7e343 277 Pfam PF01695 IstB-like ATP binding protein 82 235 1.5E-9 T 13-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 COP00_11810 ce131a8f420f65ed75becaed05b7e343 277 SUPERFAMILY SSF52540 83 239 6.0E-13 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_23935 8fbb8dd7e0f2924d39cb4655eb731b74 104 SUPERFAMILY SSF103481 4 102 6.67E-19 T 13-10-2018 COP00_23935 8fbb8dd7e0f2924d39cb4655eb731b74 104 Gene3D G3DSA:1.10.3730.20 1 104 1.3E-28 T 13-10-2018 COP00_23935 8fbb8dd7e0f2924d39cb4655eb731b74 104 Pfam PF00893 Small Multidrug Resistance protein 1 93 6.5E-31 T 13-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 COP00_10275 14e832403773cce5f2f8666d72d2b39b 243 SUPERFAMILY SSF49899 13 242 4.07E-62 T 13-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily COP00_10275 14e832403773cce5f2f8666d72d2b39b 243 Pfam PF01670 Glycosyl hydrolase family 12 27 242 1.0E-34 T 13-10-2018 IPR002594 Glycoside hydrolase family 12 GO:0000272|GO:0008810 COP00_10275 14e832403773cce5f2f8666d72d2b39b 243 Gene3D G3DSA:2.60.120.180 11 243 1.6E-96 T 13-10-2018 IPR013319 Glycoside hydrolase family 11/12 GO:0004553 MetaCyc: PWY-6717|MetaCyc: PWY-6784 COP00_18095 62e9c82d2da6d1d0010b89306873faa4 435 Pfam PF00324 Amino acid permease 12 377 2.1E-43 T 13-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 COP00_18095 62e9c82d2da6d1d0010b89306873faa4 435 Gene3D G3DSA:1.20.1740.10 2 435 2.8E-47 T 13-10-2018 COP00_18095 62e9c82d2da6d1d0010b89306873faa4 435 PIRSF PIRSF006060 1 434 7.6E-40 T 13-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 COP00_13340 9db48d4f6437f67eac20ad0856e1d078 275 SUPERFAMILY SSF51182 1 259 2.57E-101 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily COP00_13340 9db48d4f6437f67eac20ad0856e1d078 275 Gene3D G3DSA:2.60.120.10 10 260 3.4E-113 T 13-10-2018 IPR014710 RmlC-like jelly roll fold COP00_13340 9db48d4f6437f67eac20ad0856e1d078 275 Gene3D G3DSA:2.60.120.520 30 141 3.4E-113 T 13-10-2018 IPR027449 5-keto-4-deoxyuronate isomerase, N-terminal KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 COP00_13340 9db48d4f6437f67eac20ad0856e1d078 275 Hamap MF_00687 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase [kduI]. 1 275 54.647 T 13-10-2018 IPR007045 5-keto 4-deoxyuronate isomerase GO:0008697|GO:0045490 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 COP00_13340 9db48d4f6437f67eac20ad0856e1d078 275 Pfam PF04962 KduI/IolB family 32 264 4.9E-37 T 13-10-2018 IPR021120 KduI/IolB isomerase GO:0016861 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 COP00_13340 9db48d4f6437f67eac20ad0856e1d078 275 PIRSF PIRSF006625 1 275 6.0E-131 T 13-10-2018 IPR007045 5-keto 4-deoxyuronate isomerase GO:0008697|GO:0045490 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 COP00_16325 ccf6d2dec042449ffe890843cc02eb48 208 TIGRFAM TIGR02893 spore_yabQ: spore cortex biosynthesis protein YabQ 2 130 1.0E-43 T 13-10-2018 IPR014242 Spore cortex biosynthesis protein, YabQ COP00_16325 ccf6d2dec042449ffe890843cc02eb48 208 Pfam PF09578 Spore cortex protein YabQ (Spore_YabQ) 11 87 9.5E-20 T 13-10-2018 IPR019074 Spore cortex biosynthesis protein, YabQ-like COP00_13680 e6dd021b18b51c5e60bfd9b04340f1eb 308 Gene3D G3DSA:1.10.1200.10 226 298 5.1E-28 T 13-10-2018 IPR036736 ACP-like superfamily COP00_13680 e6dd021b18b51c5e60bfd9b04340f1eb 308 SUPERFAMILY SSF52499 1 212 2.35E-66 T 13-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 COP00_13680 e6dd021b18b51c5e60bfd9b04340f1eb 308 PRINTS PR01398 Isochorismatase signature 112 134 4.8E-47 T 13-10-2018 IPR016291 Isochorismatase GO:0008908 COP00_13680 e6dd021b18b51c5e60bfd9b04340f1eb 308 PRINTS PR01398 Isochorismatase signature 80 99 4.8E-47 T 13-10-2018 IPR016291 Isochorismatase GO:0008908 COP00_13680 e6dd021b18b51c5e60bfd9b04340f1eb 308 PRINTS PR01398 Isochorismatase signature 63 80 4.8E-47 T 13-10-2018 IPR016291 Isochorismatase GO:0008908 COP00_13680 e6dd021b18b51c5e60bfd9b04340f1eb 308 PRINTS PR01398 Isochorismatase signature 168 186 4.8E-47 T 13-10-2018 IPR016291 Isochorismatase GO:0008908 COP00_13680 e6dd021b18b51c5e60bfd9b04340f1eb 308 PRINTS PR01398 Isochorismatase signature 186 203 4.8E-47 T 13-10-2018 IPR016291 Isochorismatase GO:0008908 COP00_13680 e6dd021b18b51c5e60bfd9b04340f1eb 308 PRINTS PR01398 Isochorismatase signature 2 14 4.8E-47 T 13-10-2018 IPR016291 Isochorismatase GO:0008908 COP00_13680 e6dd021b18b51c5e60bfd9b04340f1eb 308 SUPERFAMILY SSF47336 229 297 1.41E-7 T 13-10-2018 IPR036736 ACP-like superfamily COP00_13680 e6dd021b18b51c5e60bfd9b04340f1eb 308 Pfam PF00550 Phosphopantetheine attachment site 230 290 2.6E-4 T 13-10-2018 IPR009081 Phosphopantetheine binding ACP domain COP00_13680 e6dd021b18b51c5e60bfd9b04340f1eb 308 Pfam PF00857 Isochorismatase family 32 204 2.1E-41 T 13-10-2018 IPR000868 Isochorismatase-like GO:0003824 COP00_13680 e6dd021b18b51c5e60bfd9b04340f1eb 308 PIRSF PIRSF001111 1 302 3.7E-134 T 13-10-2018 IPR016291 Isochorismatase GO:0008908 COP00_13680 e6dd021b18b51c5e60bfd9b04340f1eb 308 Gene3D G3DSA:3.40.50.850 1 207 4.8E-76 T 13-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 COP00_20995 8680719b0d90bb9b2bee170949ae7865 108 SUPERFAMILY SSF103481 7 106 9.81E-14 T 13-10-2018 COP00_20995 8680719b0d90bb9b2bee170949ae7865 108 Hamap MF_00010 UPF0060 membrane protein YnfA [ynfA]. 2 107 22.391 T 13-10-2018 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 COP00_20995 8680719b0d90bb9b2bee170949ae7865 108 Pfam PF02694 Uncharacterised BCR, YnfA/UPF0060 family 1 108 4.6E-47 T 13-10-2018 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 COP00_22205 8ab55567213b4346cbc4b1f3d3b426ee 712 SUPERFAMILY SSF53955 41 250 1.77E-74 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily COP00_22205 8ab55567213b4346cbc4b1f3d3b426ee 712 Gene3D G3DSA:3.40.710.10 292 604 1.9E-199 T 13-10-2018 COP00_22205 8ab55567213b4346cbc4b1f3d3b426ee 712 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 63 595 1.1E-181 T 13-10-2018 COP00_22205 8ab55567213b4346cbc4b1f3d3b426ee 712 Gene3D G3DSA:3.90.1310.20 47 500 1.9E-199 T 13-10-2018 COP00_22205 8ab55567213b4346cbc4b1f3d3b426ee 712 Pfam PF00905 Penicillin binding protein transpeptidase domain 318 591 2.4E-46 T 13-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 COP00_22205 8ab55567213b4346cbc4b1f3d3b426ee 712 Gene3D G3DSA:1.10.3810.10 62 251 1.9E-199 T 13-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 COP00_22205 8ab55567213b4346cbc4b1f3d3b426ee 712 SUPERFAMILY SSF56601 208 609 6.69E-110 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like COP00_22205 8ab55567213b4346cbc4b1f3d3b426ee 712 Pfam PF00912 Transglycosylase 52 226 2.8E-65 T 13-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 COP00_22520 7b40cbd824cb6837567a01338932c15b 62 Pfam PF09388 Spo0E like sporulation regulatory protein 2 41 1.1E-12 T 13-10-2018 IPR018540 Aspartyl-phosphate phosphatase Spo0E-like GO:0043937 COP00_22520 7b40cbd824cb6837567a01338932c15b 62 SUPERFAMILY SSF140500 1 47 2.35E-13 T 13-10-2018 IPR037208 Aspartyl-phosphate phosphatase Spo0E-like superfamily GO:0043937 COP00_22520 7b40cbd824cb6837567a01338932c15b 62 Gene3D G3DSA:1.20.58.990 1 51 1.0E-13 T 13-10-2018 IPR037208 Aspartyl-phosphate phosphatase Spo0E-like superfamily GO:0043937 COP00_19505 87dfc51a01abaf36cc97911da3cd5711 254 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 7 242 16.447 T 13-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 COP00_19505 87dfc51a01abaf36cc97911da3cd5711 254 ProSitePatterns PS01218 TatC family signature. 154 173 - T 13-10-2018 IPR019820 Sec-independent periplasmic protein translocase, conserved site COP00_19505 87dfc51a01abaf36cc97911da3cd5711 254 Pfam PF00902 Sec-independent protein translocase protein (TatC) 13 221 8.9E-58 T 13-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 COP00_19505 87dfc51a01abaf36cc97911da3cd5711 254 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 11 226 1.0E-67 T 13-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 COP00_19505 87dfc51a01abaf36cc97911da3cd5711 254 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 154 182 8.4E-40 T 13-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 COP00_19505 87dfc51a01abaf36cc97911da3cd5711 254 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 102 128 8.4E-40 T 13-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 COP00_19505 87dfc51a01abaf36cc97911da3cd5711 254 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 84 102 8.4E-40 T 13-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 COP00_19505 87dfc51a01abaf36cc97911da3cd5711 254 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 10 37 8.4E-40 T 13-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 COP00_13605 9735b8587b0138237710f4f22e52413d 136 Pfam PF00571 CBS domain 67 115 3.9E-12 T 13-10-2018 IPR000644 CBS domain COP00_13605 9735b8587b0138237710f4f22e52413d 136 Pfam PF00571 CBS domain 4 53 6.0E-15 T 13-10-2018 IPR000644 CBS domain COP00_13605 9735b8587b0138237710f4f22e52413d 136 Gene3D G3DSA:3.10.580.10 1 120 1.8E-37 T 13-10-2018 COP00_13605 9735b8587b0138237710f4f22e52413d 136 SUPERFAMILY SSF54631 2 115 1.52E-33 T 13-10-2018 COP00_13605 9735b8587b0138237710f4f22e52413d 136 SMART SM00116 10 57 1.7E-9 T 13-10-2018 IPR000644 CBS domain COP00_13605 9735b8587b0138237710f4f22e52413d 136 SMART SM00116 73 120 5.1E-10 T 13-10-2018 IPR000644 CBS domain COP00_03930 269400a97752ac7c67baa0584fba047f 236 TIGRFAM TIGR00346 azlC: azaleucine resistance protein AzlC 10 230 1.0E-108 T 13-10-2018 IPR004471 Branched-chain amino acid transport, AzlC GO:0016021 COP00_03930 269400a97752ac7c67baa0584fba047f 236 Pfam PF03591 AzlC protein 20 159 2.6E-38 T 13-10-2018 IPR011606 Branched-chain amino acid transport, permease COP00_14855 8328c3bc82c99e389a84641ef73d5b5e 282 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 40 275 5.3E-53 T 13-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 COP00_14855 8328c3bc82c99e389a84641ef73d5b5e 282 SUPERFAMILY SSF51695 34 277 1.73E-74 T 13-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 COP00_14855 8328c3bc82c99e389a84641ef73d5b5e 282 Gene3D G3DSA:3.20.20.190 22 282 8.5E-89 T 13-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 COP00_20380 9f2c1c9cccc0b7504d3216e71e156238 141 Pfam PF03852 DNA mismatch endonuclease Vsr 2 68 1.1E-23 T 13-10-2018 IPR004603 DNA mismatch endonuclease vsr GO:0004519|GO:0006298 COP00_20380 9f2c1c9cccc0b7504d3216e71e156238 141 TIGRFAM TIGR00632 vsr: DNA mismatch endonuclease Vsr 1 115 5.7E-39 T 13-10-2018 IPR004603 DNA mismatch endonuclease vsr GO:0004519|GO:0006298 COP00_20380 9f2c1c9cccc0b7504d3216e71e156238 141 PIRSF PIRSF018267 1 141 1.2E-47 T 13-10-2018 IPR004603 DNA mismatch endonuclease vsr GO:0004519|GO:0006298 COP00_20380 9f2c1c9cccc0b7504d3216e71e156238 141 Gene3D G3DSA:3.40.960.10 21 141 2.3E-37 T 13-10-2018 COP00_20380 9f2c1c9cccc0b7504d3216e71e156238 141 SUPERFAMILY SSF52980 3 134 9.12E-43 T 13-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 COP00_09805 75d054984a2ebbf005a002cbc63c09f7 157 Hamap MF_00091 S-ribosylhomocysteine lyase [luxS]. 1 157 32.353 T 13-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 COP00_09805 75d054984a2ebbf005a002cbc63c09f7 157 ProDom PD013172 LYASE SYNTHESIS LUXS AUTOINDUCER-2 PRODUCTION AUTOINDUCER S-RIBOSYLHOMOCYSTEINE AI-2 QUORUM SENSING 8 146 2.0E-77 T 13-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 COP00_09805 75d054984a2ebbf005a002cbc63c09f7 157 Gene3D G3DSA:3.30.1360.80 1 157 4.3E-63 T 13-10-2018 IPR037005 S-ribosylhomocysteinase (LuxS) superfamily GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 COP00_09805 75d054984a2ebbf005a002cbc63c09f7 157 PIRSF PIRSF006160 1 156 1.0E-59 T 13-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 COP00_09805 75d054984a2ebbf005a002cbc63c09f7 157 SUPERFAMILY SSF63411 4 150 2.11E-58 T 13-10-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 COP00_09805 75d054984a2ebbf005a002cbc63c09f7 157 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 49 67 2.2E-39 T 13-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 COP00_09805 75d054984a2ebbf005a002cbc63c09f7 157 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 119 138 2.2E-39 T 13-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 COP00_09805 75d054984a2ebbf005a002cbc63c09f7 157 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 28 46 2.2E-39 T 13-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 COP00_09805 75d054984a2ebbf005a002cbc63c09f7 157 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 78 96 2.2E-39 T 13-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 COP00_09805 75d054984a2ebbf005a002cbc63c09f7 157 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 5 23 2.2E-39 T 13-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 COP00_09805 75d054984a2ebbf005a002cbc63c09f7 157 Pfam PF02664 S-Ribosylhomocysteinase (LuxS) 4 150 7.7E-51 T 13-10-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 COP00_14405 871f4d2ffaccb6c9755388c51d4d01f1 223 Pfam PF02581 Thiamine monophosphate synthase 15 198 1.0E-61 T 13-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 COP00_14405 871f4d2ffaccb6c9755388c51d4d01f1 223 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 13 216 28.987 T 13-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 COP00_14405 871f4d2ffaccb6c9755388c51d4d01f1 223 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 14 209 3.8E-67 T 13-10-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 COP00_14405 871f4d2ffaccb6c9755388c51d4d01f1 223 Gene3D G3DSA:3.20.20.70 1 222 4.8E-79 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 COP00_14405 871f4d2ffaccb6c9755388c51d4d01f1 223 SUPERFAMILY SSF51391 9 218 8.5E-70 T 13-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 COP00_06810 6bc9b36431100c45ca283696ef29e09a 355 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 204 218 - T 13-10-2018 IPR001482 Type II/IV secretion system protein COP00_06810 6bc9b36431100c45ca283696ef29e09a 355 Pfam PF00437 Type II/IV secretion system protein 12 275 4.0E-75 T 13-10-2018 IPR001482 Type II/IV secretion system protein COP00_06810 6bc9b36431100c45ca283696ef29e09a 355 Gene3D G3DSA:3.30.450.90 2 108 1.1E-31 T 13-10-2018 COP00_06810 6bc9b36431100c45ca283696ef29e09a 355 SMART SM00382 136 262 0.0026 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_06810 6bc9b36431100c45ca283696ef29e09a 355 SUPERFAMILY SSF52540 6 305 3.78E-69 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_06810 6bc9b36431100c45ca283696ef29e09a 355 Gene3D G3DSA:3.40.50.300 110 336 9.4E-65 T 13-10-2018 COP00_16705 901e764f4b5c6e64fa0f6b4f194e6147 114 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 2 111 30.387 T 13-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_16705 901e764f4b5c6e64fa0f6b4f194e6147 114 Gene3D G3DSA:3.90.470.10 1 114 6.9E-50 T 13-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 COP00_16705 901e764f4b5c6e64fa0f6b4f194e6147 114 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 6 108 5.3E-54 T 13-10-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_16705 901e764f4b5c6e64fa0f6b4f194e6147 114 ProSitePatterns PS00464 Ribosomal protein L22 signature. 84 108 - T 13-10-2018 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 COP00_16705 901e764f4b5c6e64fa0f6b4f194e6147 114 SUPERFAMILY SSF54843 3 113 2.09E-44 T 13-10-2018 IPR036394 Ribosomal protein L22/L17 superfamily GO:0003735|GO:0005840|GO:0006412 COP00_16705 901e764f4b5c6e64fa0f6b4f194e6147 114 Pfam PF00237 Ribosomal protein L22p/L17e 6 108 2.1E-37 T 13-10-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 COP00_08930 0e6f6c65bae25c17d895a918edef0ccf 559 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 288 486 6.0E-42 T 13-10-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 COP00_08930 0e6f6c65bae25c17d895a918edef0ccf 559 SUPERFAMILY SSF53067 280 537 2.5E-58 T 13-10-2018 COP00_08930 0e6f6c65bae25c17d895a918edef0ccf 559 PIRSF PIRSF000538 1 543 3.0E-66 T 13-10-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 COP00_08930 0e6f6c65bae25c17d895a918edef0ccf 559 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 4 274 3.9E-17 T 13-10-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 COP00_08930 0e6f6c65bae25c17d895a918edef0ccf 559 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 397 417 - T 13-10-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 COP00_08930 0e6f6c65bae25c17d895a918edef0ccf 559 SUPERFAMILY SSF53067 4 280 3.63E-40 T 13-10-2018 COP00_08930 0e6f6c65bae25c17d895a918edef0ccf 559 Gene3D G3DSA:3.30.420.40 280 549 8.2E-86 T 13-10-2018 COP00_08930 0e6f6c65bae25c17d895a918edef0ccf 559 TIGRFAM TIGR01234 L-ribulokinase: ribulokinase 2 540 1.1E-258 T 13-10-2018 IPR005929 Ribulokinase GO:0005524|GO:0008741|GO:0019569 KEGG: 00040+2.7.1.16 COP00_08930 0e6f6c65bae25c17d895a918edef0ccf 559 Gene3D G3DSA:3.30.420.40 2 279 3.2E-69 T 13-10-2018 COP00_08930 0e6f6c65bae25c17d895a918edef0ccf 559 Hamap MF_00520 Ribulokinase [araB]. 1 547 53.107 T 13-10-2018 IPR005929 Ribulokinase GO:0005524|GO:0008741|GO:0019569 KEGG: 00040+2.7.1.16 COP00_08460 5f5e27a84df25b99eb11765c399c3949 226 Pfam PF03775 Septum formation inhibitor MinC, C-terminal domain 108 206 4.7E-31 T 13-10-2018 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 COP00_08460 5f5e27a84df25b99eb11765c399c3949 226 Gene3D G3DSA:2.160.20.70 101 224 3.9E-36 T 13-10-2018 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal GO:0000902 COP00_08460 5f5e27a84df25b99eb11765c399c3949 226 Gene3D G3DSA:3.30.160.540 7 87 1.6E-30 T 13-10-2018 COP00_08460 5f5e27a84df25b99eb11765c399c3949 226 SUPERFAMILY SSF63848 107 208 2.62E-30 T 13-10-2018 IPR036145 Septum formation inhibitor MinC, C-terminal domain superfamily GO:0000902 COP00_08460 5f5e27a84df25b99eb11765c399c3949 226 TIGRFAM TIGR01222 minC: septum site-determining protein MinC 8 209 4.0E-47 T 13-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 COP00_08460 5f5e27a84df25b99eb11765c399c3949 226 Hamap MF_00267 Probable septum site-determining protein MinC [minC]. 8 210 21.924 T 13-10-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 COP00_10820 d71a4745d0c15f32eec441e0f6702960 253 TIGRFAM TIGR02832 spo_yunB: sporulation protein YunB 14 232 1.5E-72 T 13-10-2018 IPR014197 Sporulation protein YunB COP00_10820 d71a4745d0c15f32eec441e0f6702960 253 Pfam PF09560 Sporulation protein YunB (Spo_YunB) 139 228 1.6E-28 T 13-10-2018 IPR014197 Sporulation protein YunB COP00_10820 d71a4745d0c15f32eec441e0f6702960 253 PIRSF PIRSF021383 1 244 1.9E-105 T 13-10-2018 IPR014197 Sporulation protein YunB COP00_12235 5b838a09dbaf7ca80dbdf1d181bacaf4 364 SUPERFAMILY SSF51395 2 338 2.69E-95 T 13-10-2018 COP00_12235 5b838a09dbaf7ca80dbdf1d181bacaf4 364 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 7 332 4.2E-78 T 13-10-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 COP00_12235 5b838a09dbaf7ca80dbdf1d181bacaf4 364 Gene3D G3DSA:3.20.20.70 3 364 1.7E-108 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 COP00_22730 9d240604ec9b844c8a9e6cf5259e9468 258 Pfam PF00696 Amino acid kinase family 3 234 6.5E-44 T 13-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 COP00_22730 9d240604ec9b844c8a9e6cf5259e9468 258 PIRSF PIRSF000728 1 254 4.4E-89 T 13-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 COP00_22730 9d240604ec9b844c8a9e6cf5259e9468 258 SUPERFAMILY SSF53633 1 253 8.77E-67 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily COP00_22730 9d240604ec9b844c8a9e6cf5259e9468 258 Hamap MF_00082 Acetylglutamate kinase [argB]. 2 249 41.177 T 13-10-2018 IPR037528 Acetylglutamate kinase ArgB GO:0003991|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 COP00_22730 9d240604ec9b844c8a9e6cf5259e9468 258 Gene3D G3DSA:3.40.1160.10 1 241 2.1E-75 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily COP00_22730 9d240604ec9b844c8a9e6cf5259e9468 258 TIGRFAM TIGR00761 argB: acetylglutamate kinase 4 232 3.6E-85 T 13-10-2018 IPR004662 Acetylglutamate kinase family GO:0005737 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 COP00_02375 28c12df4247b71c6dce24e94c8aff797 333 Pfam PF13495 Phage integrase, N-terminal SAM-like domain 37 110 6.1E-7 T 13-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 COP00_02375 28c12df4247b71c6dce24e94c8aff797 333 SUPERFAMILY SSF56349 35 325 1.35E-20 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 COP00_02375 28c12df4247b71c6dce24e94c8aff797 333 Gene3D G3DSA:1.10.150.130 29 127 1.1E-8 T 13-10-2018 IPR010998 Integrase/recombinase, N-terminal COP00_02375 28c12df4247b71c6dce24e94c8aff797 333 Gene3D G3DSA:1.10.443.10 136 332 1.4E-15 T 13-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 COP00_02375 28c12df4247b71c6dce24e94c8aff797 333 Pfam PF00589 Phage integrase family 147 319 2.6E-6 T 13-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 COP00_00520 596e40845f13a3f65eb2d5ed4593bee6 555 TIGRFAM TIGR00649 MG423: beta-CASP ribonuclease, RNase J family 10 553 3.8E-236 T 13-10-2018 IPR004613 Ribonuclease J GO:0003723|GO:0046872 COP00_00520 596e40845f13a3f65eb2d5ed4593bee6 555 Gene3D G3DSA:3.10.20.580 449 555 3.8E-39 T 13-10-2018 COP00_00520 596e40845f13a3f65eb2d5ed4593bee6 555 Pfam PF00753 Metallo-beta-lactamase superfamily 19 167 5.7E-16 T 13-10-2018 IPR001279 Metallo-beta-lactamase COP00_00520 596e40845f13a3f65eb2d5ed4593bee6 555 Gene3D G3DSA:3.40.50.10710 207 357 1.3E-194 T 13-10-2018 COP00_00520 596e40845f13a3f65eb2d5ed4593bee6 555 SUPERFAMILY SSF56281 11 423 7.39E-96 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like COP00_00520 596e40845f13a3f65eb2d5ed4593bee6 555 Pfam PF07521 Zn-dependent metallo-hydrolase RNA specificity domain 358 408 2.3E-8 T 13-10-2018 IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain COP00_00520 596e40845f13a3f65eb2d5ed4593bee6 555 Gene3D G3DSA:3.60.15.10 12 442 1.3E-194 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like COP00_00520 596e40845f13a3f65eb2d5ed4593bee6 555 Hamap MF_01491 Ribonuclease J [rnj]. 4 555 48.16 T 13-10-2018 IPR030854 Ribonuclease J, bacteria GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0090501 COP00_00520 596e40845f13a3f65eb2d5ed4593bee6 555 SMART SM00849 21 215 5.1E-24 T 13-10-2018 IPR001279 Metallo-beta-lactamase COP00_00520 596e40845f13a3f65eb2d5ed4593bee6 555 PIRSF PIRSF004803 1 555 3.0E-249 T 13-10-2018 IPR030854 Ribonuclease J, bacteria GO:0004521|GO:0004534|GO:0006396|GO:0008270|GO:0090501 COP00_00520 596e40845f13a3f65eb2d5ed4593bee6 555 ProSitePatterns PS01292 Uncharacterized protein family UPF0036 signature. 364 392 - T 13-10-2018 IPR001587 Ribonuclease J, conserved site COP00_10825 8427c80c7a54f1705094825bc8ea0aa6 101 Gene3D G3DSA:3.30.1980.10 1 100 2.9E-25 T 13-10-2018 IPR036493 Hypothetical protein YunC superfamily COP00_10825 8427c80c7a54f1705094825bc8ea0aa6 101 SUPERFAMILY SSF102891 2 99 1.19E-33 T 13-10-2018 IPR036493 Hypothetical protein YunC superfamily COP00_10825 8427c80c7a54f1705094825bc8ea0aa6 101 Pfam PF08827 Domain of unknown function (DUF1805) 37 99 9.7E-25 T 13-10-2018 IPR014931 Protein of unknown function DUF1805 COP00_14345 e39d5138ae4a7246bda2e5b7aba4a3a7 649 PRINTS PR01165 Cytochrome c oxidase subunit I signature 274 295 1.3E-101 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 COP00_14345 e39d5138ae4a7246bda2e5b7aba4a3a7 649 PRINTS PR01165 Cytochrome c oxidase subunit I signature 162 174 1.3E-101 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 COP00_14345 e39d5138ae4a7246bda2e5b7aba4a3a7 649 PRINTS PR01165 Cytochrome c oxidase subunit I signature 194 212 1.3E-101 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 COP00_14345 e39d5138ae4a7246bda2e5b7aba4a3a7 649 PRINTS PR01165 Cytochrome c oxidase subunit I signature 344 365 1.3E-101 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 COP00_14345 e39d5138ae4a7246bda2e5b7aba4a3a7 649 PRINTS PR01165 Cytochrome c oxidase subunit I signature 93 116 1.3E-101 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 COP00_14345 e39d5138ae4a7246bda2e5b7aba4a3a7 649 PRINTS PR01165 Cytochrome c oxidase subunit I signature 120 144 1.3E-101 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 COP00_14345 e39d5138ae4a7246bda2e5b7aba4a3a7 649 PRINTS PR01165 Cytochrome c oxidase subunit I signature 407 426 1.3E-101 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 COP00_14345 e39d5138ae4a7246bda2e5b7aba4a3a7 649 PRINTS PR01165 Cytochrome c oxidase subunit I signature 379 397 1.3E-101 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 COP00_14345 e39d5138ae4a7246bda2e5b7aba4a3a7 649 PRINTS PR01165 Cytochrome c oxidase subunit I signature 457 478 1.3E-101 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 COP00_14345 e39d5138ae4a7246bda2e5b7aba4a3a7 649 PRINTS PR01165 Cytochrome c oxidase subunit I signature 223 242 1.3E-101 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 COP00_14345 e39d5138ae4a7246bda2e5b7aba4a3a7 649 PRINTS PR01165 Cytochrome c oxidase subunit I signature 46 71 1.3E-101 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 COP00_14345 e39d5138ae4a7246bda2e5b7aba4a3a7 649 PRINTS PR01165 Cytochrome c oxidase subunit I signature 320 335 1.3E-101 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 COP00_14345 e39d5138ae4a7246bda2e5b7aba4a3a7 649 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 276 330 - T 13-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 COP00_14345 e39d5138ae4a7246bda2e5b7aba4a3a7 649 TIGRFAM TIGR02882 QoxB: cytochrome aa3 quinol oxidase, subunit I 4 646 0.0 T 13-10-2018 IPR014233 Quinol oxidase subunit I GO:0005507|GO:0016021|GO:0016682|GO:0020037|GO:0055114 COP00_14345 e39d5138ae4a7246bda2e5b7aba4a3a7 649 Gene3D G3DSA:1.20.210.10 30 562 2.8E-201 T 13-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 COP00_14345 e39d5138ae4a7246bda2e5b7aba4a3a7 649 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 55 501 5.5E-146 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 COP00_14345 e39d5138ae4a7246bda2e5b7aba4a3a7 649 SUPERFAMILY SSF81442 44 556 3.4E-176 T 13-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 COP00_09330 db84c74e65a242209fbcb8600741e2c1 572 SUPERFAMILY SSF56801 17 562 2.09E-162 T 13-10-2018 COP00_09330 db84c74e65a242209fbcb8600741e2c1 572 Gene3D G3DSA:3.30.300.30 458 571 2.2E-28 T 13-10-2018 COP00_09330 db84c74e65a242209fbcb8600741e2c1 572 Pfam PF13193 AMP-binding enzyme C-terminal domain 471 549 1.1E-25 T 13-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain COP00_09330 db84c74e65a242209fbcb8600741e2c1 572 Pfam PF00501 AMP-binding enzyme 51 462 6.5E-97 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 COP00_09330 db84c74e65a242209fbcb8600741e2c1 572 Gene3D G3DSA:3.40.50.12780 17 455 1.1E-122 T 13-10-2018 COP00_09330 db84c74e65a242209fbcb8600741e2c1 572 ProSitePatterns PS00455 Putative AMP-binding domain signature. 211 222 - T 13-10-2018 IPR020845 AMP-binding, conserved site COP00_17515 241a3de80fcf1e4a63cfd5c3bbe99545 205 SUPERFAMILY SSF55469 1 204 8.9E-48 T 13-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 COP00_17515 241a3de80fcf1e4a63cfd5c3bbe99545 205 Gene3D G3DSA:3.40.109.10 1 205 1.1E-57 T 13-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 COP00_17515 241a3de80fcf1e4a63cfd5c3bbe99545 205 Pfam PF00881 Nitroreductase family 7 183 1.1E-26 T 13-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 COP00_06740 f10a86a7a576f7b30e2255faa54b7408 264 Pfam PF11079 Bacterial protein YqhG of unknown function 1 258 2.4E-123 T 13-10-2018 IPR024562 Uncharacterised protein family YqhG COP00_06740 f10a86a7a576f7b30e2255faa54b7408 264 ProDom PD123329 YQHG BH2818 1 258 8.0E-112 T 13-10-2018 IPR024562 Uncharacterised protein family YqhG COP00_11450 167b51f9fefb9de4c2c54ca914c1daec 151 SUPERFAMILY SSF55804 3 146 2.62E-35 T 13-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 COP00_11450 167b51f9fefb9de4c2c54ca914c1daec 151 TIGRFAM TIGR00848 fruA: PTS system, fructose subfamily, IIA component 5 131 1.7E-36 T 13-10-2018 IPR004715 Phosphotransferase system, IIA component fructose subfamily GO:0008982|GO:0009401|GO:0016021 COP00_11450 167b51f9fefb9de4c2c54ca914c1daec 151 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 5 147 1.5E-36 T 13-10-2018 IPR002178 PTS EIIA type-2 domain COP00_11450 167b51f9fefb9de4c2c54ca914c1daec 151 Gene3D G3DSA:3.40.930.10 1 149 6.8E-38 T 13-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 COP00_01145 0c5ff81284c9e32e44bda74328edddfa 293 Gene3D G3DSA:1.10.40.50 226 293 9.7E-24 T 13-10-2018 COP00_01145 0c5ff81284c9e32e44bda74328edddfa 293 SUPERFAMILY SSF50249 1 62 1.33E-14 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold COP00_01145 0c5ff81284c9e32e44bda74328edddfa 293 Gene3D G3DSA:2.40.50.140 1 61 6.5E-27 T 13-10-2018 COP00_01145 0c5ff81284c9e32e44bda74328edddfa 293 Pfam PF03193 RsgA GTPase 60 225 3.2E-61 T 13-10-2018 IPR010914 RsgA GTPase domain GO:0003924|GO:0005525 COP00_01145 0c5ff81284c9e32e44bda74328edddfa 293 Pfam PF16745 RsgA N-terminal domain 3 56 2.6E-24 T 13-10-2018 IPR031944 Ribosome biogenesis GTPase RsgA, N-terminal COP00_01145 0c5ff81284c9e32e44bda74328edddfa 293 SUPERFAMILY SSF52540 64 290 1.54E-62 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_01145 0c5ff81284c9e32e44bda74328edddfa 293 Hamap MF_01820 Small ribosomal subunit biogenesis GTPase RsgA [rsgA]. 2 290 38.398 T 13-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 COP00_01145 0c5ff81284c9e32e44bda74328edddfa 293 Gene3D G3DSA:3.40.50.300 62 225 1.8E-47 T 13-10-2018 COP00_01145 0c5ff81284c9e32e44bda74328edddfa 293 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 39 283 9.3E-92 T 13-10-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 COP00_09725 7d5813787751a76081ed7493042eca53 378 SUPERFAMILY SSF53756 2 369 2.36E-84 T 13-10-2018 COP00_09725 7d5813787751a76081ed7493042eca53 378 Pfam PF00534 Glycosyl transferases group 1 187 346 2.4E-37 T 13-10-2018 IPR001296 Glycosyl transferase, family 1 COP00_09725 7d5813787751a76081ed7493042eca53 378 Pfam PF13439 Glycosyltransferase Family 4 14 176 4.3E-26 T 13-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 COP00_09725 7d5813787751a76081ed7493042eca53 378 Gene3D G3DSA:3.40.50.2000 198 352 3.9E-42 T 13-10-2018 COP00_09725 7d5813787751a76081ed7493042eca53 378 Gene3D G3DSA:3.40.50.2000 1 197 2.4E-28 T 13-10-2018 COP00_14245 79b636396669d5ae5be65bdd5508a30d 276 Gene3D G3DSA:1.20.58.1950 223 273 2.2E-10 T 13-10-2018 COP00_14245 79b636396669d5ae5be65bdd5508a30d 276 SUPERFAMILY SSF63520 168 272 1.7E-30 T 13-10-2018 IPR036634 PRD domain superfamily GO:0006355 COP00_14245 79b636396669d5ae5be65bdd5508a30d 276 SMART SM01061 1 59 2.8E-20 T 13-10-2018 IPR004341 CAT RNA-binding domain GO:0003723 COP00_14245 79b636396669d5ae5be65bdd5508a30d 276 Gene3D G3DSA:1.20.890.100 164 218 3.7E-18 T 13-10-2018 COP00_14245 79b636396669d5ae5be65bdd5508a30d 276 Pfam PF00874 PRD domain 72 159 1.7E-25 T 13-10-2018 IPR011608 PRD domain GO:0006355 COP00_14245 79b636396669d5ae5be65bdd5508a30d 276 Pfam PF00874 PRD domain 178 270 5.0E-23 T 13-10-2018 IPR011608 PRD domain GO:0006355 COP00_14245 79b636396669d5ae5be65bdd5508a30d 276 Gene3D G3DSA:2.30.24.10 1 55 2.2E-19 T 13-10-2018 IPR036650 CAT RNA-binding domain superfamily GO:0003723 COP00_14245 79b636396669d5ae5be65bdd5508a30d 276 Gene3D G3DSA:1.10.1790.10 62 163 6.2E-36 T 13-10-2018 COP00_14245 79b636396669d5ae5be65bdd5508a30d 276 SUPERFAMILY SSF63520 51 163 2.75E-33 T 13-10-2018 IPR036634 PRD domain superfamily GO:0006355 COP00_14245 79b636396669d5ae5be65bdd5508a30d 276 Pfam PF03123 CAT RNA binding domain 2 55 1.9E-18 T 13-10-2018 IPR004341 CAT RNA-binding domain GO:0003723 COP00_14245 79b636396669d5ae5be65bdd5508a30d 276 SUPERFAMILY SSF50151 2 53 3.79E-15 T 13-10-2018 IPR036650 CAT RNA-binding domain superfamily GO:0003723 COP00_00775 d5da4cb76b347c8d45158b70b0420253 416 Gene3D G3DSA:3.40.50.620 1 240 1.8E-38 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold COP00_00775 d5da4cb76b347c8d45158b70b0420253 416 Hamap MF_01539 UPF0348 protein . 2 405 39.873 T 13-10-2018 IPR008513 Uncharacterised protein family UPF0348 COP00_00775 d5da4cb76b347c8d45158b70b0420253 416 Pfam PF05636 HIGH Nucleotidyl Transferase 1 388 1.3E-135 T 13-10-2018 IPR008513 Uncharacterised protein family UPF0348 COP00_00775 d5da4cb76b347c8d45158b70b0420253 416 SUPERFAMILY SSF52374 10 238 2.58E-19 T 13-10-2018 COP00_15780 d5c0fbb2d3e7fdc03bf1c9c5be591ba2 399 PIRSF PIRSF038994 7 397 6.5E-132 T 13-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 COP00_15780 d5c0fbb2d3e7fdc03bf1c9c5be591ba2 399 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 8 390 1.2E-122 T 13-10-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 COP00_15780 d5c0fbb2d3e7fdc03bf1c9c5be591ba2 399 SUPERFAMILY SSF51338 9 397 8.64E-13 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 COP00_15780 d5c0fbb2d3e7fdc03bf1c9c5be591ba2 399 Gene3D G3DSA:2.30.40.10 16 391 2.0E-146 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 COP00_15780 d5c0fbb2d3e7fdc03bf1c9c5be591ba2 399 Pfam PF01979 Amidohydrolase family 62 391 7.5E-29 T 13-10-2018 IPR006680 Amidohydrolase-related GO:0016787 COP00_15780 d5c0fbb2d3e7fdc03bf1c9c5be591ba2 399 Gene3D G3DSA:3.20.20.140 65 364 2.0E-146 T 13-10-2018 COP00_15780 d5c0fbb2d3e7fdc03bf1c9c5be591ba2 399 SUPERFAMILY SSF51556 65 364 5.02E-98 T 13-10-2018 IPR032466 Metal-dependent hydrolase COP00_06675 24c973c1bc25f95c014bc6c607d56104 353 PRINTS PR00599 Methionine aminopeptidase-1 signature 305 317 1.4E-6 T 13-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 COP00_06675 24c973c1bc25f95c014bc6c607d56104 353 PRINTS PR00599 Methionine aminopeptidase-1 signature 207 223 1.4E-6 T 13-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 COP00_06675 24c973c1bc25f95c014bc6c607d56104 353 PRINTS PR00599 Methionine aminopeptidase-1 signature 274 286 1.4E-6 T 13-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 COP00_06675 24c973c1bc25f95c014bc6c607d56104 353 Gene3D G3DSA:3.90.230.10 128 353 1.8E-85 T 13-10-2018 COP00_06675 24c973c1bc25f95c014bc6c607d56104 353 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 283 295 - T 13-10-2018 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site COP00_06675 24c973c1bc25f95c014bc6c607d56104 353 SUPERFAMILY SSF55920 82 346 3.79E-83 T 13-10-2018 IPR036005 Creatinase/aminopeptidase-like COP00_06675 24c973c1bc25f95c014bc6c607d56104 353 Pfam PF01321 Creatinase/Prolidase N-terminal domain 3 127 1.2E-29 T 13-10-2018 IPR000587 Creatinase, N-terminal GO:0016787 COP00_06675 24c973c1bc25f95c014bc6c607d56104 353 Pfam PF00557 Metallopeptidase family M24 136 337 1.1E-66 T 13-10-2018 IPR000994 Peptidase M24 COP00_06675 24c973c1bc25f95c014bc6c607d56104 353 Gene3D G3DSA:3.40.350.10 1 127 4.9E-38 T 13-10-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal COP00_16285 db108cd084e0010056ed83f90af2d8d4 188 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 107 117 - T 13-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 COP00_16285 db108cd084e0010056ed83f90af2d8d4 188 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 14 27 - T 13-10-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 COP00_16285 db108cd084e0010056ed83f90af2d8d4 188 Pfam PF01195 Peptidyl-tRNA hydrolase 4 185 1.5E-57 T 13-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 COP00_16285 db108cd084e0010056ed83f90af2d8d4 188 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 1 186 1.3E-70 T 13-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 COP00_16285 db108cd084e0010056ed83f90af2d8d4 188 Gene3D G3DSA:3.40.50.1470 1 188 8.2E-70 T 13-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 COP00_16285 db108cd084e0010056ed83f90af2d8d4 188 SUPERFAMILY SSF53178 1 185 1.18E-67 T 13-10-2018 IPR036416 Peptidyl-tRNA hydrolase superfamily GO:0004045 MetaCyc: PWY-6308 COP00_16285 db108cd084e0010056ed83f90af2d8d4 188 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 1 178 36.59 T 13-10-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 COP00_20970 121167a09c052aee1be39c198f141e04 324 Gene3D G3DSA:3.40.50.970 1 324 6.7E-129 T 13-10-2018 COP00_20970 121167a09c052aee1be39c198f141e04 324 Pfam PF00676 Dehydrogenase E1 component 16 312 6.2E-99 T 13-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 COP00_20970 121167a09c052aee1be39c198f141e04 324 SUPERFAMILY SSF52518 5 323 1.84E-103 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold COP00_20765 f315baae654025b84e0a5a28615c5f4b 369 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 15 361 2.4E-129 T 13-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase COP00_20765 f315baae654025b84e0a5a28615c5f4b 369 PIRSF PIRSF000390 2 366 5.0E-118 T 13-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase COP00_20765 f315baae654025b84e0a5a28615c5f4b 369 Gene3D G3DSA:3.40.640.10 1 242 1.7E-98 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 COP00_20765 f315baae654025b84e0a5a28615c5f4b 369 Gene3D G3DSA:3.90.1150.10 245 364 6.5E-37 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 COP00_20765 f315baae654025b84e0a5a28615c5f4b 369 SUPERFAMILY SSF53383 10 362 5.03E-121 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase COP00_04825 cc1a2da2007daeb2a8cd6d016be760c5 507 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 235 261 9.0E-14 T 13-10-2018 COP00_04825 cc1a2da2007daeb2a8cd6d016be760c5 507 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 71 96 9.0E-14 T 13-10-2018 COP00_04825 cc1a2da2007daeb2a8cd6d016be760c5 507 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 213 234 9.0E-14 T 13-10-2018 COP00_04825 cc1a2da2007daeb2a8cd6d016be760c5 507 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 301 313 9.0E-14 T 13-10-2018 COP00_04825 cc1a2da2007daeb2a8cd6d016be760c5 507 Pfam PF00361 Proton-conducting membrane transporter 123 402 4.7E-50 T 13-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 COP00_04825 cc1a2da2007daeb2a8cd6d016be760c5 507 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 64 109 8.9E-8 T 13-10-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 COP00_08575 3d563a48c7864e8052bf8958214e8c13 551 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 352 368 1.3E-32 T 13-10-2018 COP00_08575 3d563a48c7864e8052bf8958214e8c13 551 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 97 116 1.3E-32 T 13-10-2018 COP00_08575 3d563a48c7864e8052bf8958214e8c13 551 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 469 488 1.3E-32 T 13-10-2018 COP00_08575 3d563a48c7864e8052bf8958214e8c13 551 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 439 458 1.3E-32 T 13-10-2018 COP00_08575 3d563a48c7864e8052bf8958214e8c13 551 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 492 510 1.3E-32 T 13-10-2018 COP00_08575 3d563a48c7864e8052bf8958214e8c13 551 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 93 265 7.0E-19 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 COP00_08575 3d563a48c7864e8052bf8958214e8c13 551 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 442 450 - T 13-10-2018 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 COP00_08575 3d563a48c7864e8052bf8958214e8c13 551 SMART SM00382 89 267 4.4E-14 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_08575 3d563a48c7864e8052bf8958214e8c13 551 SUPERFAMILY SSF54211 352 531 7.21E-43 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold COP00_08575 3d563a48c7864e8052bf8958214e8c13 551 TIGRFAM TIGR02902 spore_lonB: ATP-dependent protease LonB 6 531 3.1E-286 T 13-10-2018 IPR014251 Sporulation protease LonB COP00_08575 3d563a48c7864e8052bf8958214e8c13 551 Gene3D G3DSA:3.40.50.300 52 263 7.2E-33 T 13-10-2018 COP00_08575 3d563a48c7864e8052bf8958214e8c13 551 Gene3D G3DSA:3.30.230.10 343 544 1.8E-51 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup COP00_08575 3d563a48c7864e8052bf8958214e8c13 551 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 344 534 3.4E-34 T 13-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 COP00_08575 3d563a48c7864e8052bf8958214e8c13 551 SUPERFAMILY SSF52540 56 328 9.15E-44 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_10910 89940359babea5bf80eac10f4b32f625 775 Gene3D G3DSA:3.30.365.10 126 354 4.9E-60 T 13-10-2018 COP00_10910 89940359babea5bf80eac10f4b32f625 775 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 19 121 1.6E-27 T 13-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead COP00_10910 89940359babea5bf80eac10f4b32f625 775 Gene3D G3DSA:3.30.365.10 454 624 7.8E-100 T 13-10-2018 COP00_10910 89940359babea5bf80eac10f4b32f625 775 Gene3D G3DSA:3.90.1170.50 1 121 1.0E-40 T 13-10-2018 COP00_10910 89940359babea5bf80eac10f4b32f625 775 SMART SM01008 18 121 9.1E-47 T 13-10-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead COP00_10910 89940359babea5bf80eac10f4b32f625 775 Gene3D G3DSA:3.30.365.10 190 285 4.9E-60 T 13-10-2018 COP00_10910 89940359babea5bf80eac10f4b32f625 775 SUPERFAMILY SSF54665 3 142 2.62E-42 T 13-10-2018 IPR036856 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead superfamily COP00_10910 89940359babea5bf80eac10f4b32f625 775 SUPERFAMILY SSF56003 113 768 2.62E-162 T 13-10-2018 IPR037165 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain superfamily GO:0016491|GO:0055114 COP00_10910 89940359babea5bf80eac10f4b32f625 775 Gene3D G3DSA:3.30.365.10 372 762 7.8E-100 T 13-10-2018 COP00_10910 89940359babea5bf80eac10f4b32f625 775 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 155 709 8.0E-135 T 13-10-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 COP00_17425 cac25497c1879f7ec83c03b6867c2e21 238 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 65 233 3.4E-46 T 13-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 COP00_17425 cac25497c1879f7ec83c03b6867c2e21 238 SMART SM00646 124 233 2.5E-30 T 13-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 COP00_17425 cac25497c1879f7ec83c03b6867c2e21 238 Gene3D G3DSA:3.40.630.40 63 237 8.2E-54 T 13-10-2018 COP00_17425 cac25497c1879f7ec83c03b6867c2e21 238 Gene3D G3DSA:2.30.30.40 1 42 1.4E-6 T 13-10-2018 COP00_17425 cac25497c1879f7ec83c03b6867c2e21 238 SUPERFAMILY SSF53187 63 236 3.45E-50 T 13-10-2018 COP00_03175 04e11691d0f91fdb9386c7d994fda815 310 Gene3D G3DSA:3.40.50.300 11 221 1.8E-8 T 13-10-2018 COP00_03175 04e11691d0f91fdb9386c7d994fda815 310 SUPERFAMILY SSF52540 14 168 1.57E-10 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_03175 04e11691d0f91fdb9386c7d994fda815 310 Pfam PF13479 AAA domain 15 209 3.0E-12 T 13-10-2018 COP00_20210 82eb1421f0d69cbf8c23363c0d541eb7 227 Hamap MF_00421 Phosphoribosylformylglycinamidine synthase subunit PurQ [purQ]. 1 217 44.098 T 13-10-2018 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 COP00_20210 82eb1421f0d69cbf8c23363c0d541eb7 227 SMART SM01211 1 219 4.3E-134 T 13-10-2018 COP00_20210 82eb1421f0d69cbf8c23363c0d541eb7 227 SUPERFAMILY SSF52317 2 219 5.56E-77 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like COP00_20210 82eb1421f0d69cbf8c23363c0d541eb7 227 Gene3D G3DSA:3.40.50.880 1 220 7.5E-72 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like COP00_20210 82eb1421f0d69cbf8c23363c0d541eb7 227 PIRSF PIRSF001586 1 222 5.9E-88 T 13-10-2018 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 COP00_20210 82eb1421f0d69cbf8c23363c0d541eb7 227 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 2 205 1.1E-42 T 13-10-2018 COP00_20210 82eb1421f0d69cbf8c23363c0d541eb7 227 TIGRFAM TIGR01737 FGAM_synth_I: phosphoribosylformylglycinamidine synthase I 1 218 5.1E-93 T 13-10-2018 IPR010075 Phosphoribosylformylglycinamidine synthase subunit PurQ GO:0004642|GO:0005737|GO:0006189 KEGG: 00220+3.5.1.2|KEGG: 00230+6.3.5.3|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 COP00_03700 ceaaeb793c57e6a7a64eba7f048eef97 655 Gene3D G3DSA:3.30.230.10 222 403 5.4E-72 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup COP00_03700 ceaaeb793c57e6a7a64eba7f048eef97 655 Pfam PF00204 DNA gyrase B 223 393 4.6E-59 T 13-10-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 COP00_03700 ceaaeb793c57e6a7a64eba7f048eef97 655 Gene3D G3DSA:3.30.565.10 6 221 8.9E-87 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily COP00_03700 ceaaeb793c57e6a7a64eba7f048eef97 655 Pfam PF01751 Toprim domain 424 527 2.3E-17 T 13-10-2018 IPR006171 TOPRIM domain COP00_03700 ceaaeb793c57e6a7a64eba7f048eef97 655 Gene3D G3DSA:3.40.50.670 411 643 4.7E-103 T 13-10-2018 IPR013759 DNA topoisomerase, type IIA, subunit B, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 COP00_03700 ceaaeb793c57e6a7a64eba7f048eef97 655 SMART SM00387 34 178 6.9E-24 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase COP00_03700 ceaaeb793c57e6a7a64eba7f048eef97 655 SUPERFAMILY SSF55874 9 220 1.7E-68 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily COP00_03700 ceaaeb793c57e6a7a64eba7f048eef97 655 PRINTS PR01159 DNA gyrase subunit B signature 9 19 1.6E-58 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 COP00_03700 ceaaeb793c57e6a7a64eba7f048eef97 655 PRINTS PR01159 DNA gyrase subunit B signature 183 198 1.6E-58 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 COP00_03700 ceaaeb793c57e6a7a64eba7f048eef97 655 PRINTS PR01159 DNA gyrase subunit B signature 377 397 1.6E-58 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 COP00_03700 ceaaeb793c57e6a7a64eba7f048eef97 655 PRINTS PR01159 DNA gyrase subunit B signature 313 329 1.6E-58 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 COP00_03700 ceaaeb793c57e6a7a64eba7f048eef97 655 PRINTS PR01159 DNA gyrase subunit B signature 363 377 1.6E-58 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 COP00_03700 ceaaeb793c57e6a7a64eba7f048eef97 655 PRINTS PR01159 DNA gyrase subunit B signature 610 626 1.6E-58 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 COP00_03700 ceaaeb793c57e6a7a64eba7f048eef97 655 PRINTS PR01159 DNA gyrase subunit B signature 198 211 1.6E-58 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 COP00_03700 ceaaeb793c57e6a7a64eba7f048eef97 655 PRINTS PR01159 DNA gyrase subunit B signature 475 484 1.6E-58 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 COP00_03700 ceaaeb793c57e6a7a64eba7f048eef97 655 PRINTS PR01159 DNA gyrase subunit B signature 222 244 1.6E-58 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 COP00_03700 ceaaeb793c57e6a7a64eba7f048eef97 655 PRINTS PR01159 DNA gyrase subunit B signature 594 606 1.6E-58 T 13-10-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 COP00_03700 ceaaeb793c57e6a7a64eba7f048eef97 655 SUPERFAMILY SSF54211 223 393 1.76E-53 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold COP00_03700 ceaaeb793c57e6a7a64eba7f048eef97 655 PRINTS PR00418 DNA topoisomerase II family signature 73 86 6.3E-70 T 13-10-2018 COP00_03700 ceaaeb793c57e6a7a64eba7f048eef97 655 PRINTS PR00418 DNA topoisomerase II family signature 509 526 6.3E-70 T 13-10-2018 COP00_03700 ceaaeb793c57e6a7a64eba7f048eef97 655 PRINTS PR00418 DNA topoisomerase II family signature 573 589 6.3E-70 T 13-10-2018 COP00_03700 ceaaeb793c57e6a7a64eba7f048eef97 655 PRINTS PR00418 DNA topoisomerase II family signature 38 53 6.3E-70 T 13-10-2018 COP00_03700 ceaaeb793c57e6a7a64eba7f048eef97 655 PRINTS PR00418 DNA topoisomerase II family signature 529 541 6.3E-70 T 13-10-2018 COP00_03700 ceaaeb793c57e6a7a64eba7f048eef97 655 PRINTS PR00418 DNA topoisomerase II family signature 269 282 6.3E-70 T 13-10-2018 COP00_03700 ceaaeb793c57e6a7a64eba7f048eef97 655 PRINTS PR00418 DNA topoisomerase II family signature 115 129 6.3E-70 T 13-10-2018 COP00_03700 ceaaeb793c57e6a7a64eba7f048eef97 655 PRINTS PR00418 DNA topoisomerase II family signature 425 439 6.3E-70 T 13-10-2018 COP00_03700 ceaaeb793c57e6a7a64eba7f048eef97 655 PRINTS PR00418 DNA topoisomerase II family signature 491 507 6.3E-70 T 13-10-2018 COP00_03700 ceaaeb793c57e6a7a64eba7f048eef97 655 SMART SM00433 38 634 0.0 T 13-10-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 COP00_03700 ceaaeb793c57e6a7a64eba7f048eef97 655 TIGRFAM TIGR01058 parE_Gpos: DNA topoisomerase IV, B subunit 8 643 0.0 T 13-10-2018 IPR005740 DNA topoisomerase 4 subunit B, Firmicutes/Mollicutes GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 COP00_03700 ceaaeb793c57e6a7a64eba7f048eef97 655 SUPERFAMILY SSF56719 399 634 4.18E-87 T 13-10-2018 IPR013760 DNA topoisomerase, type IIA-like domain superfamily GO:0003918|GO:0005524 Reactome: R-HSA-4615885 COP00_03700 ceaaeb793c57e6a7a64eba7f048eef97 655 Hamap MF_00939 DNA topoisomerase 4 subunit B [parE]. 7 639 48.622 T 13-10-2018 IPR005740 DNA topoisomerase 4 subunit B, Firmicutes/Mollicutes GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 COP00_03700 ceaaeb793c57e6a7a64eba7f048eef97 655 ProSitePatterns PS00177 DNA topoisomerase II signature. 427 435 - T 13-10-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 COP00_03700 ceaaeb793c57e6a7a64eba7f048eef97 655 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 34 156 2.4E-21 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase COP00_03700 ceaaeb793c57e6a7a64eba7f048eef97 655 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 569 630 2.2E-30 T 13-10-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 COP00_11610 ec42704436155ff6a955ee731e82fc32 89 Pfam PF10779 Haemolysin XhlA 10 75 1.2E-21 T 13-10-2018 IPR019715 Haemolysin XhlA COP00_07205 f919cfd5f70be9e0aae542529b0ff1a3 295 Gene3D G3DSA:1.20.58.180 205 285 1.7E-36 T 13-10-2018 COP00_07205 f919cfd5f70be9e0aae542529b0ff1a3 295 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 2 288 1.0E-167 T 13-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 COP00_07205 f919cfd5f70be9e0aae542529b0ff1a3 295 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 3 280 2.4E-147 T 13-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 COP00_07205 f919cfd5f70be9e0aae542529b0ff1a3 295 Gene3D G3DSA:3.30.930.10 1 204 1.9E-105 T 13-10-2018 COP00_07205 f919cfd5f70be9e0aae542529b0ff1a3 295 SUPERFAMILY SSF55681 1 280 1.59E-130 T 13-10-2018 COP00_07205 f919cfd5f70be9e0aae542529b0ff1a3 295 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 133 153 1.6E-67 T 13-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 COP00_07205 f919cfd5f70be9e0aae542529b0ff1a3 295 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 241 257 1.6E-67 T 13-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 COP00_07205 f919cfd5f70be9e0aae542529b0ff1a3 295 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 76 96 1.6E-67 T 13-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 COP00_07205 f919cfd5f70be9e0aae542529b0ff1a3 295 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 107 131 1.6E-67 T 13-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 COP00_07205 f919cfd5f70be9e0aae542529b0ff1a3 295 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 156 171 1.6E-67 T 13-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 COP00_07205 f919cfd5f70be9e0aae542529b0ff1a3 295 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 55 70 1.6E-67 T 13-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 COP00_07205 f919cfd5f70be9e0aae542529b0ff1a3 295 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 1 281 57.706 T 13-10-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 COP00_04525 bcaa9375cec4ebbaa1d178205525b606 110 Gene3D G3DSA:1.10.10.10 4 110 6.4E-31 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_04525 bcaa9375cec4ebbaa1d178205525b606 110 Pfam PF01022 Bacterial regulatory protein, arsR family 34 80 2.4E-17 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 COP00_04525 bcaa9375cec4ebbaa1d178205525b606 110 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 29 44 1.4E-12 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 COP00_04525 bcaa9375cec4ebbaa1d178205525b606 110 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 76 91 1.4E-12 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 COP00_04525 bcaa9375cec4ebbaa1d178205525b606 110 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 61 76 1.4E-12 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 COP00_04525 bcaa9375cec4ebbaa1d178205525b606 110 SUPERFAMILY SSF46785 17 108 1.64E-25 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_04525 bcaa9375cec4ebbaa1d178205525b606 110 SMART SM00418 27 105 3.9E-33 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 COP00_19605 d5a436132cec535ef11c67b855495cf1 179 Gene3D G3DSA:3.40.50.10130 13 168 8.8E-12 T 13-10-2018 COP00_19605 d5a436132cec535ef11c67b855495cf1 179 SUPERFAMILY SSF52980 19 163 8.58E-16 T 13-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 COP00_19605 d5a436132cec535ef11c67b855495cf1 179 SMART SM00891 21 116 1.5E-13 T 13-10-2018 IPR006166 ERCC4 domain GO:0003677|GO:0004518 Reactome: R-HSA-6783310 COP00_19605 d5a436132cec535ef11c67b855495cf1 179 Pfam PF02732 ERCC4 domain 24 163 8.3E-15 T 13-10-2018 IPR006166 ERCC4 domain GO:0003677|GO:0004518 Reactome: R-HSA-6783310 COP00_09260 76c656cf69d4d51418457fd19a97fee0 401 TIGRFAM TIGR00342 TIGR00342: tRNA sulfurtransferase ThiI 7 372 1.8E-140 T 13-10-2018 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 KEGG: 00730+2.8.1.4 COP00_09260 76c656cf69d4d51418457fd19a97fee0 401 Hamap MF_00021 tRNA sulfurtransferase [thiI]. 1 401 163.07 T 13-10-2018 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 KEGG: 00730+2.8.1.4 COP00_09260 76c656cf69d4d51418457fd19a97fee0 401 Gene3D G3DSA:3.30.2130.30 1 174 5.3E-62 T 13-10-2018 COP00_09260 76c656cf69d4d51418457fd19a97fee0 401 SUPERFAMILY SSF143437 3 173 1.92E-54 T 13-10-2018 COP00_09260 76c656cf69d4d51418457fd19a97fee0 401 SMART SM00981 74 165 4.5E-25 T 13-10-2018 IPR004114 THUMP domain GO:0003723 COP00_09260 76c656cf69d4d51418457fd19a97fee0 401 Gene3D G3DSA:3.40.50.620 175 401 2.0E-75 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold COP00_09260 76c656cf69d4d51418457fd19a97fee0 401 Pfam PF02568 Thiamine biosynthesis protein (ThiI) 175 369 1.6E-66 T 13-10-2018 IPR020536 Thil, AANH domain GO:0004810 KEGG: 00730+2.8.1.4 COP00_09260 76c656cf69d4d51418457fd19a97fee0 401 SUPERFAMILY SSF52402 174 383 2.43E-52 T 13-10-2018 COP00_09260 76c656cf69d4d51418457fd19a97fee0 401 Pfam PF02926 THUMP domain 30 164 2.0E-26 T 13-10-2018 IPR004114 THUMP domain GO:0003723 COP00_23650 6e57d9d61f8304b6f0510d10645a3f7b 276 Gene3D G3DSA:3.20.20.190 18 275 1.6E-70 T 13-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 COP00_23650 6e57d9d61f8304b6f0510d10645a3f7b 276 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 41 266 2.8E-38 T 13-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 COP00_23650 6e57d9d61f8304b6f0510d10645a3f7b 276 SUPERFAMILY SSF51695 36 271 9.68E-58 T 13-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 COP00_15490 deca5eeabdacac22602fecbf4a8a5c2f 867 SUPERFAMILY SSF53720 17 460 3.27E-83 T 13-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 COP00_15490 deca5eeabdacac22602fecbf4a8a5c2f 867 SUPERFAMILY SSF56796 455 866 3.27E-126 T 13-10-2018 COP00_15490 deca5eeabdacac22602fecbf4a8a5c2f 867 PIRSF PIRSF000111 1 867 0.0 T 13-10-2018 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase GO:0004022|GO:0006066|GO:0008774|GO:0015976|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396 COP00_15490 deca5eeabdacac22602fecbf4a8a5c2f 867 Gene3D G3DSA:3.40.50.1970 457 649 8.3E-64 T 13-10-2018 COP00_15490 deca5eeabdacac22602fecbf4a8a5c2f 867 Pfam PF00465 Iron-containing alcohol dehydrogenase 464 851 1.2E-122 T 13-10-2018 IPR001670 Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 COP00_15490 deca5eeabdacac22602fecbf4a8a5c2f 867 Gene3D G3DSA:1.20.1090.10 650 867 1.7E-75 T 13-10-2018 COP00_15490 deca5eeabdacac22602fecbf4a8a5c2f 867 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 638 666 - T 13-10-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 COP00_15490 deca5eeabdacac22602fecbf4a8a5c2f 867 Pfam PF00171 Aldehyde dehydrogenase family 16 276 2.0E-21 T 13-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 COP00_15490 deca5eeabdacac22602fecbf4a8a5c2f 867 Gene3D G3DSA:3.40.309.10 227 412 4.6E-186 T 13-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 COP00_15490 deca5eeabdacac22602fecbf4a8a5c2f 867 Gene3D G3DSA:3.40.605.10 19 451 4.6E-186 T 13-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 COP00_18465 d353e291a1b69adf63fb4fbd2a9b213a 332 Gene3D G3DSA:3.40.50.2300 146 278 7.0E-87 T 13-10-2018 COP00_18465 d353e291a1b69adf63fb4fbd2a9b213a 332 SUPERFAMILY SSF53822 43 328 6.33E-70 T 13-10-2018 IPR028082 Periplasmic binding protein-like I COP00_18465 d353e291a1b69adf63fb4fbd2a9b213a 332 Pfam PF13407 Periplasmic binding protein domain 46 292 3.7E-64 T 13-10-2018 IPR025997 Periplasmic binding protein COP00_18465 d353e291a1b69adf63fb4fbd2a9b213a 332 Gene3D G3DSA:3.40.50.2300 56 293 7.0E-87 T 13-10-2018 COP00_16080 4ec458e541a8dc9e578b50eb6e5c138e 162 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 8 149 47.002 T 13-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 COP00_16080 4ec458e541a8dc9e578b50eb6e5c138e 162 SUPERFAMILY SSF53927 2 153 2.38E-53 T 13-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 COP00_16080 4ec458e541a8dc9e578b50eb6e5c138e 162 Pfam PF14437 MafB19-like deaminase 4 149 1.2E-40 T 13-10-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 COP00_16080 4ec458e541a8dc9e578b50eb6e5c138e 162 Gene3D G3DSA:3.40.140.10 1 162 9.1E-62 T 13-10-2018 COP00_17705 d2f784d9714bec272755cd2131e3e0fa 452 TIGRFAM TIGR00893 2A0114: D-galactonate transporter 24 431 4.7E-153 T 13-10-2018 COP00_17705 d2f784d9714bec272755cd2131e3e0fa 452 Gene3D G3DSA:1.20.1250.20 238 436 3.6E-32 T 13-10-2018 COP00_17705 d2f784d9714bec272755cd2131e3e0fa 452 SUPERFAMILY SSF103473 6 442 1.14E-84 T 13-10-2018 IPR036259 MFS transporter superfamily COP00_17705 d2f784d9714bec272755cd2131e3e0fa 452 Gene3D G3DSA:1.20.1250.20 9 210 6.8E-47 T 13-10-2018 COP00_17705 d2f784d9714bec272755cd2131e3e0fa 452 PIRSF PIRSF002808 2 446 2.6E-48 T 13-10-2018 IPR000849 Sugar phosphate transporter GO:0016021|GO:0022857|GO:0055085 COP00_17705 d2f784d9714bec272755cd2131e3e0fa 452 Pfam PF07690 Major Facilitator Superfamily 321 441 7.1E-10 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 COP00_17705 d2f784d9714bec272755cd2131e3e0fa 452 Pfam PF07690 Major Facilitator Superfamily 21 309 1.5E-48 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 COP00_01375 30425d9b91e93aacd97b500958c93f69 147 Pfam PF02050 Flagellar FliJ protein 24 142 4.7E-18 T 13-10-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 COP00_01375 30425d9b91e93aacd97b500958c93f69 147 TIGRFAM TIGR02473 flagell_FliJ: flagellar export protein FliJ 5 143 4.9E-35 T 13-10-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 COP00_22855 9d6cef259e162a74b75b92ea181a6ad0 305 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 121 305 7.3E-34 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 COP00_22855 9d6cef259e162a74b75b92ea181a6ad0 305 Gene3D G3DSA:1.10.3720.10 93 305 1.9E-23 T 13-10-2018 IPR035906 MetI-like superfamily COP00_22855 9d6cef259e162a74b75b92ea181a6ad0 305 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 28 80 4.7E-16 T 13-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain COP00_22855 9d6cef259e162a74b75b92ea181a6ad0 305 SUPERFAMILY SSF161098 99 287 1.1E-28 T 13-10-2018 IPR035906 MetI-like superfamily COP00_04575 5c4c1233d5b92914f3f7b45172992036 320 Gene3D G3DSA:3.40.50.10740 1 158 8.5E-57 T 13-10-2018 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal COP00_04575 5c4c1233d5b92914f3f7b45172992036 320 SUPERFAMILY SSF141986 167 310 3.4E-30 T 13-10-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily COP00_04575 5c4c1233d5b92914f3f7b45172992036 320 Pfam PF02016 LD-carboxypeptidase 13 306 5.5E-70 T 13-10-2018 IPR003507 Peptidase family S66 COP00_04575 5c4c1233d5b92914f3f7b45172992036 320 PIRSF PIRSF028757 1 320 1.4E-81 T 13-10-2018 IPR003507 Peptidase family S66 COP00_04575 5c4c1233d5b92914f3f7b45172992036 320 SUPERFAMILY SSF52317 1 166 1.28E-43 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like COP00_04575 5c4c1233d5b92914f3f7b45172992036 320 Gene3D G3DSA:3.50.30.60 159 318 1.7E-42 T 13-10-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily COP00_20185 c5d7d760dc179eeb228bf26b2eda418a 162 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 5 158 33.359 T 13-10-2018 IPR033747 Class I PurE COP00_20185 c5d7d760dc179eeb228bf26b2eda418a 162 Pfam PF00731 AIR carboxylase 6 151 3.7E-66 T 13-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 COP00_20185 c5d7d760dc179eeb228bf26b2eda418a 162 SUPERFAMILY SSF52255 4 160 6.15E-69 T 13-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 COP00_20185 c5d7d760dc179eeb228bf26b2eda418a 162 PIRSF PIRSF001338 1 162 6.0E-70 T 13-10-2018 IPR024694 PurE, prokaryotic type GO:0006189 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234 COP00_20185 c5d7d760dc179eeb228bf26b2eda418a 162 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 6 161 2.1E-68 T 13-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 COP00_20185 c5d7d760dc179eeb228bf26b2eda418a 162 Gene3D G3DSA:3.40.50.7700 1 162 6.3E-73 T 13-10-2018 IPR035893 PurE domain superfamily Reactome: R-HSA-73817 COP00_20185 c5d7d760dc179eeb228bf26b2eda418a 162 SMART SM01001 3 154 1.1E-106 T 13-10-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 COP00_16390 57d4c8c1dcb24c380c95e82ece4db01a 297 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 183 204 - T 13-10-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 COP00_16390 57d4c8c1dcb24c380c95e82ece4db01a 297 SUPERFAMILY SSF109998 37 183 1.14E-23 T 13-10-2018 IPR027304 Trigger factor/SurA domain superfamily COP00_16390 57d4c8c1dcb24c380c95e82ece4db01a 297 SUPERFAMILY SSF54534 147 245 9.42E-17 T 13-10-2018 COP00_16390 57d4c8c1dcb24c380c95e82ece4db01a 297 Gene3D G3DSA:3.10.50.40 155 243 7.4E-30 T 13-10-2018 COP00_16390 57d4c8c1dcb24c380c95e82ece4db01a 297 Pfam PF13145 PPIC-type PPIASE domain 135 261 5.8E-18 T 13-10-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0003755 COP00_16390 57d4c8c1dcb24c380c95e82ece4db01a 297 Gene3D G3DSA:1.10.4030.30 54 154 7.4E-30 T 13-10-2018 COP00_11465 eecf6a066ddb4c247f5227cc6cc76e5e 69 SUPERFAMILY SSF55008 2 68 1.96E-21 T 13-10-2018 IPR036163 Heavy metal-associated domain superfamily GO:0030001|GO:0046872 COP00_11465 eecf6a066ddb4c247f5227cc6cc76e5e 69 TIGRFAM TIGR00003 TIGR00003: copper ion binding protein 3 68 2.2E-26 T 13-10-2018 IPR006122 Heavy metal-associated domain, copper ion-binding GO:0005507 Reactome: R-HSA-936837 COP00_11465 eecf6a066ddb4c247f5227cc6cc76e5e 69 Gene3D G3DSA:3.30.70.100 1 68 6.5E-26 T 13-10-2018 COP00_11465 eecf6a066ddb4c247f5227cc6cc76e5e 69 Pfam PF00403 Heavy-metal-associated domain 5 66 1.1E-16 T 13-10-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 COP00_11465 eecf6a066ddb4c247f5227cc6cc76e5e 69 ProSitePatterns PS01047 Heavy-metal-associated domain. 8 37 - T 13-10-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 COP00_21680 8697929d76c5a76bd6855269d0f7d374 271 Gene3D G3DSA:1.20.1080.10 1 244 2.7E-75 T 13-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 COP00_21680 8697929d76c5a76bd6855269d0f7d374 271 Pfam PF00230 Major intrinsic protein 3 230 1.1E-49 T 13-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 COP00_21680 8697929d76c5a76bd6855269d0f7d374 271 ProSitePatterns PS00221 MIP family signature. 62 70 - T 13-10-2018 IPR022357 Major intrinsic protein, conserved site Reactome: R-HSA-432047 COP00_21680 8697929d76c5a76bd6855269d0f7d374 271 TIGRFAM TIGR00861 MIP: MIP family channel proteins 6 230 3.1E-66 T 13-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 COP00_21680 8697929d76c5a76bd6855269d0f7d374 271 PRINTS PR00783 Major intrinsic protein family signature 166 188 4.2E-47 T 13-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 COP00_21680 8697929d76c5a76bd6855269d0f7d374 271 PRINTS PR00783 Major intrinsic protein family signature 2 21 4.2E-47 T 13-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 COP00_21680 8697929d76c5a76bd6855269d0f7d374 271 PRINTS PR00783 Major intrinsic protein family signature 213 233 4.2E-47 T 13-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 COP00_21680 8697929d76c5a76bd6855269d0f7d374 271 PRINTS PR00783 Major intrinsic protein family signature 44 68 4.2E-47 T 13-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 COP00_21680 8697929d76c5a76bd6855269d0f7d374 271 PRINTS PR00783 Major intrinsic protein family signature 81 100 4.2E-47 T 13-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 COP00_21680 8697929d76c5a76bd6855269d0f7d374 271 PRINTS PR00783 Major intrinsic protein family signature 136 154 4.2E-47 T 13-10-2018 IPR000425 Major intrinsic protein GO:0015267|GO:0016020|GO:0055085 Reactome: R-HSA-432047 COP00_21680 8697929d76c5a76bd6855269d0f7d374 271 SUPERFAMILY SSF81338 2 234 7.33E-71 T 13-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 COP00_22815 7bfa82bdd6057fef92ca84a1e98fd730 538 SUPERFAMILY SSF53850 33 535 5.02E-147 T 13-10-2018 COP00_22815 7bfa82bdd6057fef92ca84a1e98fd730 538 PIRSF PIRSF002741 1 538 2.2E-179 T 13-10-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 COP00_22815 7bfa82bdd6057fef92ca84a1e98fd730 538 Gene3D G3DSA:3.90.76.10 68 187 1.6E-189 T 13-10-2018 COP00_22815 7bfa82bdd6057fef92ca84a1e98fd730 538 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 85 107 - T 13-10-2018 IPR023765 Solute-binding protein family 5, conserved site COP00_22815 7bfa82bdd6057fef92ca84a1e98fd730 538 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 79 447 4.5E-98 T 13-10-2018 IPR000914 Solute-binding protein family 5 domain COP00_22815 7bfa82bdd6057fef92ca84a1e98fd730 538 Gene3D G3DSA:3.10.105.10 281 505 1.6E-189 T 13-10-2018 COP00_22815 7bfa82bdd6057fef92ca84a1e98fd730 538 Gene3D G3DSA:3.40.190.10 46 519 1.6E-189 T 13-10-2018 COP00_00440 cec9258e0893785ff9361c57be6882ad 396 Pfam PF02687 FtsX-like permease family 302 389 3.1E-12 T 13-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 COP00_00440 cec9258e0893785ff9361c57be6882ad 396 Pfam PF12704 MacB-like periplasmic core domain 21 238 2.7E-33 T 13-10-2018 IPR025857 MacB-like periplasmic core domain COP00_14040 69bd603420ea7808419b7c4deff4b673 556 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 134 143 - T 13-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 COP00_14040 69bd603420ea7808419b7c4deff4b673 556 SUPERFAMILY SSF47323 432 556 1.44E-35 T 13-10-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 COP00_14040 69bd603420ea7808419b7c4deff4b673 556 SMART SM00836 437 556 8.2E-53 T 13-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 COP00_14040 69bd603420ea7808419b7c4deff4b673 556 Pfam PF05746 DALR anticodon binding domain 438 556 2.0E-36 T 13-10-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 COP00_14040 69bd603420ea7808419b7c4deff4b673 556 SUPERFAMILY SSF52374 117 448 3.66E-99 T 13-10-2018 COP00_14040 69bd603420ea7808419b7c4deff4b673 556 Gene3D G3DSA:3.40.50.620 124 431 7.0E-179 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold COP00_14040 69bd603420ea7808419b7c4deff4b673 556 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 7 556 2.8E-181 T 13-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 COP00_14040 69bd603420ea7808419b7c4deff4b673 556 SMART SM01016 5 95 2.6E-34 T 13-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 COP00_14040 69bd603420ea7808419b7c4deff4b673 556 Gene3D G3DSA:3.30.1360.70 2 113 2.3E-28 T 13-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 COP00_14040 69bd603420ea7808419b7c4deff4b673 556 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 10 94 5.2E-25 T 13-10-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 COP00_14040 69bd603420ea7808419b7c4deff4b673 556 Hamap MF_00123 Arginine--tRNA ligase [argS]. 9 556 28.547 T 13-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 COP00_14040 69bd603420ea7808419b7c4deff4b673 556 Pfam PF00750 tRNA synthetases class I (R) 105 400 1.0E-27 T 13-10-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 COP00_14040 69bd603420ea7808419b7c4deff4b673 556 Gene3D G3DSA:1.10.730.10 432 556 7.0E-179 T 13-10-2018 COP00_14040 69bd603420ea7808419b7c4deff4b673 556 PRINTS PR01038 Arginyl-tRNA synthetase signature 163 176 6.0E-24 T 13-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 COP00_14040 69bd603420ea7808419b7c4deff4b673 556 PRINTS PR01038 Arginyl-tRNA synthetase signature 306 327 6.0E-24 T 13-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 COP00_14040 69bd603420ea7808419b7c4deff4b673 556 PRINTS PR01038 Arginyl-tRNA synthetase signature 124 139 6.0E-24 T 13-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 COP00_14040 69bd603420ea7808419b7c4deff4b673 556 PRINTS PR01038 Arginyl-tRNA synthetase signature 139 155 6.0E-24 T 13-10-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 COP00_14040 69bd603420ea7808419b7c4deff4b673 556 SUPERFAMILY SSF55190 4 115 1.57E-27 T 13-10-2018 IPR036695 Arginyl tRNA synthetase N-terminal domain superfamily GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 COP00_16835 07a9d2ac068b19cb789282abe9209e88 291 SMART SM00382 32 223 1.9E-11 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_16835 07a9d2ac068b19cb789282abe9209e88 291 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 COP00_16835 07a9d2ac068b19cb789282abe9209e88 291 Gene3D G3DSA:3.40.50.300 1 289 7.6E-78 T 13-10-2018 COP00_16835 07a9d2ac068b19cb789282abe9209e88 291 Pfam PF00005 ABC transporter 25 174 2.1E-31 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 COP00_16835 07a9d2ac068b19cb789282abe9209e88 291 TIGRFAM TIGR04521 ECF_ATPase_2: energy-coupling factor transporter ATPase 3 280 1.0E-123 T 13-10-2018 IPR030946 Energy-coupling factor transporter ATP-binding protein EcfA2 COP00_16835 07a9d2ac068b19cb789282abe9209e88 291 SUPERFAMILY SSF52540 1 237 2.89E-59 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_12505 8f683ef6defec2426180d3ec1023cfbb 187 SUPERFAMILY SSF52540 1 184 1.74E-7 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_12505 8f683ef6defec2426180d3ec1023cfbb 187 Gene3D G3DSA:3.40.50.300 1 187 1.5E-30 T 13-10-2018 COP00_11020 02428ef0fbb4213c11f1d743b3512f6c 118 Pfam PF03960 ArsC family 6 114 6.9E-18 T 13-10-2018 IPR006660 Arsenate reductase-like COP00_11020 02428ef0fbb4213c11f1d743b3512f6c 118 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 3 117 8.5E-35 T 13-10-2018 IPR006504 Transcriptional regulator Spx/MgsR COP00_11020 02428ef0fbb4213c11f1d743b3512f6c 118 SUPERFAMILY SSF52833 5 117 1.26E-35 T 13-10-2018 IPR036249 Thioredoxin-like superfamily COP00_11020 02428ef0fbb4213c11f1d743b3512f6c 118 Gene3D G3DSA:3.40.30.10 1 116 3.6E-47 T 13-10-2018 COP00_08305 e3a9064ed44fea1d00e7526165fda7b0 342 Pfam PF02547 Queuosine biosynthesis protein 4 341 9.4E-144 T 13-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 COP00_08305 e3a9064ed44fea1d00e7526165fda7b0 342 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 342 47.291 T 13-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 COP00_08305 e3a9064ed44fea1d00e7526165fda7b0 342 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1 341 8.6E-157 T 13-10-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 COP00_08305 e3a9064ed44fea1d00e7526165fda7b0 342 SUPERFAMILY SSF111337 1 341 5.75E-141 T 13-10-2018 IPR036100 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA superfamily GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 COP00_08305 e3a9064ed44fea1d00e7526165fda7b0 342 Gene3D G3DSA:2.40.10.240 64 162 5.6E-140 T 13-10-2018 COP00_08305 e3a9064ed44fea1d00e7526165fda7b0 342 Gene3D G3DSA:3.40.1780.10 14 341 5.6E-140 T 13-10-2018 COP00_06405 2e776fdd53d51596a5a895261d5414d1 114 SUPERFAMILY SSF46973 9 106 1.83E-32 T 13-10-2018 IPR036542 Phosphotransferase system, lactose/cellobiose-type IIA subunit superfamily GO:0009401 COP00_06405 2e776fdd53d51596a5a895261d5414d1 114 PIRSF PIRSF000699 5 113 9.2E-35 T 13-10-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 COP00_06405 2e776fdd53d51596a5a895261d5414d1 114 Gene3D G3DSA:1.20.58.280 6 111 1.7E-34 T 13-10-2018 COP00_06405 2e776fdd53d51596a5a895261d5414d1 114 Pfam PF02255 PTS system, Lactose/Cellobiose specific IIA subunit 13 106 6.0E-32 T 13-10-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 COP00_17630 28af479abbe4a46031f62b61e582185a 257 Gene3D G3DSA:1.10.1660.10 4 148 5.4E-31 T 13-10-2018 COP00_17630 28af479abbe4a46031f62b61e582185a 257 SMART SM00422 7 76 1.5E-19 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 COP00_17630 28af479abbe4a46031f62b61e582185a 257 Pfam PF07739 TipAS antibiotic-recognition domain 149 246 2.7E-7 T 13-10-2018 IPR012925 TipAS antibiotic-recognition domain COP00_17630 28af479abbe4a46031f62b61e582185a 257 SUPERFAMILY SSF46955 5 112 2.09E-25 T 13-10-2018 IPR009061 Putative DNA-binding domain superfamily COP00_17630 28af479abbe4a46031f62b61e582185a 257 Pfam PF13411 MerR HTH family regulatory protein 7 74 9.4E-16 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 COP00_09020 38d69d9eb6003813ff37d3891ae2a503 310 Pfam PF01695 IstB-like ATP binding protein 158 274 7.9E-12 T 13-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 COP00_09020 38d69d9eb6003813ff37d3891ae2a503 310 Pfam PF07319 Primosomal protein DnaI N-terminus 1 98 1.9E-31 T 13-10-2018 IPR009928 Primosomal DnaI, N-terminal COP00_09020 38d69d9eb6003813ff37d3891ae2a503 310 Gene3D G3DSA:3.40.50.300 108 302 1.9E-52 T 13-10-2018 COP00_09020 38d69d9eb6003813ff37d3891ae2a503 310 SUPERFAMILY SSF52540 128 274 1.56E-21 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_09020 38d69d9eb6003813ff37d3891ae2a503 310 SMART SM00382 160 284 1.3E-8 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_03780 00187b05d04473c8386accc7f75580c1 85 SUPERFAMILY SSF140683 2 73 2.09E-18 T 13-10-2018 IPR038062 ScdA-like, N-terminal domain superfamily COP00_03780 00187b05d04473c8386accc7f75580c1 85 Gene3D G3DSA:1.10.3910.10 1 76 1.1E-26 T 13-10-2018 IPR038062 ScdA-like, N-terminal domain superfamily COP00_03780 00187b05d04473c8386accc7f75580c1 85 Pfam PF08984 Domain of unknown function (DUF1858) 6 60 6.8E-15 T 13-10-2018 IPR015077 Domain of unknown function DUF1858 COP00_13995 0ec23c9368afe59edc701fb6043e4ed7 171 TIGRFAM TIGR04567 RNAP_delt_lowGC: DNA-directed RNA polymerase delta subunit 12 93 5.5E-33 T 13-10-2018 IPR029757 DNA-directed RNA polymerase subunit delta GO:0006351|GO:0006355 COP00_13995 0ec23c9368afe59edc701fb6043e4ed7 171 Pfam PF05066 HB1, ASXL, restriction endonuclease HTH domain 14 81 6.2E-14 T 13-10-2018 IPR007759 HB1/Asxl, restriction endonuclease HTH domain GO:0006351|GO:0006355 COP00_13995 0ec23c9368afe59edc701fb6043e4ed7 171 Gene3D G3DSA:1.10.10.1250 2 82 1.2E-32 T 13-10-2018 IPR038087 DNA-directed RNA polymerase subunit delta domain superfamily COP00_13995 0ec23c9368afe59edc701fb6043e4ed7 171 Hamap MF_00357 Probable DNA-directed RNA polymerase subunit delta [rpoE]. 9 169 15.774 T 13-10-2018 IPR029757 DNA-directed RNA polymerase subunit delta GO:0006351|GO:0006355 COP00_00745 69b534e8d98c318942259e8222a97056 149 SUPERFAMILY SSF158622 5 126 5.36E-34 T 13-10-2018 IPR023378 YheA/YmcA-like domain superfamily COP00_00745 69b534e8d98c318942259e8222a97056 149 Pfam PF06133 Control of competence regulator ComK, YlbF/YmcA 12 115 1.5E-21 T 13-10-2018 IPR010368 Control of competence regulator ComK, YlbF/YmcA COP00_00745 69b534e8d98c318942259e8222a97056 149 Gene3D G3DSA:1.20.1500.10 5 126 1.3E-29 T 13-10-2018 IPR023378 YheA/YmcA-like domain superfamily COP00_07570 48622ea86aecabfd76ccfdf2d4a1d7fe 215 Pfam PF00196 Bacterial regulatory proteins, luxR family 152 207 6.7E-19 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 COP00_07570 48622ea86aecabfd76ccfdf2d4a1d7fe 215 SUPERFAMILY SSF52172 3 133 5.12E-39 T 13-10-2018 IPR011006 CheY-like superfamily COP00_07570 48622ea86aecabfd76ccfdf2d4a1d7fe 215 SUPERFAMILY SSF46894 146 213 9.18E-20 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 COP00_07570 48622ea86aecabfd76ccfdf2d4a1d7fe 215 SMART SM00421 150 207 2.7E-21 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 COP00_07570 48622ea86aecabfd76ccfdf2d4a1d7fe 215 Gene3D G3DSA:3.40.50.12740 4 213 2.3E-69 T 13-10-2018 COP00_07570 48622ea86aecabfd76ccfdf2d4a1d7fe 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 183 195 9.7E-12 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 COP00_07570 48622ea86aecabfd76ccfdf2d4a1d7fe 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 153 167 9.7E-12 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 COP00_07570 48622ea86aecabfd76ccfdf2d4a1d7fe 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 167 183 9.7E-12 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 COP00_07570 48622ea86aecabfd76ccfdf2d4a1d7fe 215 Pfam PF00072 Response regulator receiver domain 5 116 1.5E-32 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 COP00_07570 48622ea86aecabfd76ccfdf2d4a1d7fe 215 SMART SM00448 3 116 2.0E-39 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 COP00_07570 48622ea86aecabfd76ccfdf2d4a1d7fe 215 ProSitePatterns PS00622 LuxR-type HTH domain signature. 167 194 - T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 COP00_01535 8f3935471bf877b9d92dd29273db2d15 421 Gene3D G3DSA:2.30.42.10 203 289 6.9E-17 T 13-10-2018 COP00_01535 8f3935471bf877b9d92dd29273db2d15 421 Pfam PF02163 Peptidase family M50 8 407 1.6E-82 T 13-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 COP00_01535 8f3935471bf877b9d92dd29273db2d15 421 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 3 420 1.5E-144 T 13-10-2018 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 COP00_01535 8f3935471bf877b9d92dd29273db2d15 421 SMART SM00228 186 260 2.5E-4 T 13-10-2018 IPR001478 PDZ domain GO:0005515 COP00_01535 8f3935471bf877b9d92dd29273db2d15 421 SUPERFAMILY SSF50156 175 269 6.57E-17 T 13-10-2018 IPR036034 PDZ superfamily GO:0005515 COP00_09765 e57925cee8a3391c009955db43a8edd1 270 SUPERFAMILY SSF161098 72 253 8.11E-30 T 13-10-2018 IPR035906 MetI-like superfamily COP00_09765 e57925cee8a3391c009955db43a8edd1 270 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 92 264 2.3E-24 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 COP00_09765 e57925cee8a3391c009955db43a8edd1 270 Gene3D G3DSA:1.10.3720.10 72 267 1.8E-23 T 13-10-2018 IPR035906 MetI-like superfamily COP00_14700 b94c811095b3c3492d3122bf65e02b16 485 SMART SM01060 9 393 0.0 T 13-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 COP00_14700 b94c811095b3c3492d3122bf65e02b16 485 ProSitePatterns PS00438 Catalase proximal active site signature. 45 61 - T 13-10-2018 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 COP00_14700 b94c811095b3c3492d3122bf65e02b16 485 PRINTS PR00067 Catalase signature 322 348 1.1E-77 T 13-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 COP00_14700 b94c811095b3c3492d3122bf65e02b16 485 PRINTS PR00067 Catalase signature 125 143 1.1E-77 T 13-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 COP00_14700 b94c811095b3c3492d3122bf65e02b16 485 PRINTS PR00067 Catalase signature 106 123 1.1E-77 T 13-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 COP00_14700 b94c811095b3c3492d3122bf65e02b16 485 PRINTS PR00067 Catalase signature 290 317 1.1E-77 T 13-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 COP00_14700 b94c811095b3c3492d3122bf65e02b16 485 PRINTS PR00067 Catalase signature 85 103 1.1E-77 T 13-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 COP00_14700 b94c811095b3c3492d3122bf65e02b16 485 PRINTS PR00067 Catalase signature 22 45 1.1E-77 T 13-10-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 COP00_14700 b94c811095b3c3492d3122bf65e02b16 485 Gene3D G3DSA:2.40.180.10 1 481 1.0E-240 T 13-10-2018 IPR037060 Catalase core domain superfamily GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 COP00_14700 b94c811095b3c3492d3122bf65e02b16 485 SUPERFAMILY SSF56634 3 483 1.11E-225 T 13-10-2018 IPR020835 Catalase superfamily GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 COP00_14700 b94c811095b3c3492d3122bf65e02b16 485 Pfam PF00199 Catalase 9 390 9.0E-204 T 13-10-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 COP00_14700 b94c811095b3c3492d3122bf65e02b16 485 Pfam PF06628 Catalase-related immune-responsive 415 477 1.4E-26 T 13-10-2018 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 COP00_14700 b94c811095b3c3492d3122bf65e02b16 485 PIRSF PIRSF038928 1 481 2.2E-234 T 13-10-2018 IPR024711 Catalase, mono-functional, haem-containing, clades 1 and 3 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 COP00_14700 b94c811095b3c3492d3122bf65e02b16 485 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 335 343 - T 13-10-2018 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695|Reactome: R-HSA-9033241 COP00_22605 f595fcfa00f23ea6f09e9bffe6164c27 479 SMART SM00345 17 76 6.1E-18 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 COP00_22605 f595fcfa00f23ea6f09e9bffe6164c27 479 Gene3D G3DSA:3.90.1150.10 117 474 5.7E-106 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 COP00_22605 f595fcfa00f23ea6f09e9bffe6164c27 479 Pfam PF00155 Aminotransferase class I and II 120 467 8.9E-31 T 13-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 COP00_22605 f595fcfa00f23ea6f09e9bffe6164c27 479 SUPERFAMILY SSF53383 95 478 2.72E-93 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase COP00_22605 f595fcfa00f23ea6f09e9bffe6164c27 479 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 76 1.9E-18 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 COP00_22605 f595fcfa00f23ea6f09e9bffe6164c27 479 Gene3D G3DSA:3.40.640.10 153 372 5.7E-106 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 COP00_22605 f595fcfa00f23ea6f09e9bffe6164c27 479 SUPERFAMILY SSF46785 6 86 6.83E-21 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_22605 f595fcfa00f23ea6f09e9bffe6164c27 479 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 50 66 9.2E-7 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 COP00_22605 f595fcfa00f23ea6f09e9bffe6164c27 479 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 36 50 9.2E-7 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 COP00_22605 f595fcfa00f23ea6f09e9bffe6164c27 479 Gene3D G3DSA:1.10.10.10 3 77 4.4E-23 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_00690 24ab4ff5995ebdd2054f418278f2e26b 355 SUPERFAMILY SSF81464 14 111 5.07E-19 T 13-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 COP00_00690 24ab4ff5995ebdd2054f418278f2e26b 355 PRINTS PR01166 Cytochrome c oxidase subunit II signature 217 234 6.0E-6 T 13-10-2018 COP00_00690 24ab4ff5995ebdd2054f418278f2e26b 355 PRINTS PR01166 Cytochrome c oxidase subunit II signature 96 116 6.0E-6 T 13-10-2018 COP00_00690 24ab4ff5995ebdd2054f418278f2e26b 355 PRINTS PR01166 Cytochrome c oxidase subunit II signature 84 96 6.0E-6 T 13-10-2018 COP00_00690 24ab4ff5995ebdd2054f418278f2e26b 355 TIGRFAM TIGR02866 CoxB: cytochrome c oxidase, subunit II 31 244 3.2E-52 T 13-10-2018 IPR014222 Cytochrome c oxidase, subunit II GO:0016021|GO:0016491 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 COP00_00690 24ab4ff5995ebdd2054f418278f2e26b 355 ProSitePatterns PS00078 CO II and nitrous oxide reductase dinuclear copper centers signature. 174 228 - T 13-10-2018 IPR001505 Copper centre Cu(A) GO:0005507 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 COP00_00690 24ab4ff5995ebdd2054f418278f2e26b 355 Pfam PF02790 Cytochrome C oxidase subunit II, transmembrane domain 48 106 1.7E-7 T 13-10-2018 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 COP00_00690 24ab4ff5995ebdd2054f418278f2e26b 355 SUPERFAMILY SSF49503 127 280 3.65E-39 T 13-10-2018 IPR008972 Cupredoxin COP00_00690 24ab4ff5995ebdd2054f418278f2e26b 355 Gene3D G3DSA:2.60.40.2600 127 355 4.9E-66 T 13-10-2018 COP00_00690 24ab4ff5995ebdd2054f418278f2e26b 355 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 154 234 6.4E-12 T 13-10-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 COP00_00690 24ab4ff5995ebdd2054f418278f2e26b 355 SUPERFAMILY SSF46626 258 352 1.35E-17 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 COP00_00690 24ab4ff5995ebdd2054f418278f2e26b 355 Gene3D G3DSA:1.10.287.90 27 113 4.2E-23 T 13-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 COP00_00690 24ab4ff5995ebdd2054f418278f2e26b 355 Pfam PF00034 Cytochrome c 260 352 2.6E-10 T 13-10-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-111457|Reactome: R-HSA-111458|Reactome: R-HSA-111459|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 COP00_23925 b3787400cb4e533de4c719b22670661f 173 Pfam PF12867 DinB superfamily 29 161 4.7E-14 T 13-10-2018 IPR024775 DinB-like domain COP00_23925 b3787400cb4e533de4c719b22670661f 173 Gene3D G3DSA:1.20.120.450 3 173 9.3E-23 T 13-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes COP00_23925 b3787400cb4e533de4c719b22670661f 173 SUPERFAMILY SSF109854 7 167 2.29E-30 T 13-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes COP00_16945 c6b79058705178f52bdf6fa5c04f1aa5 644 PRINTS PR00133 Glycosyl hydrolase family 3 signature 305 323 8.1E-5 T 13-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 COP00_16945 c6b79058705178f52bdf6fa5c04f1aa5 644 PRINTS PR00133 Glycosyl hydrolase family 3 signature 114 130 8.1E-5 T 13-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 COP00_16945 c6b79058705178f52bdf6fa5c04f1aa5 644 PRINTS PR00133 Glycosyl hydrolase family 3 signature 139 158 8.1E-5 T 13-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 COP00_16945 c6b79058705178f52bdf6fa5c04f1aa5 644 PRINTS PR00133 Glycosyl hydrolase family 3 signature 217 233 8.1E-5 T 13-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 COP00_16945 c6b79058705178f52bdf6fa5c04f1aa5 644 Gene3D G3DSA:3.40.50.1700 422 636 3.2E-53 T 13-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 COP00_16945 c6b79058705178f52bdf6fa5c04f1aa5 644 SUPERFAMILY SSF52279 437 631 5.89E-8 T 13-10-2018 IPR036881 Glycoside hydrolase family 3 C-terminal domain superfamily GO:0004553|GO:0005975 COP00_16945 c6b79058705178f52bdf6fa5c04f1aa5 644 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 437 629 2.0E-13 T 13-10-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 COP00_16945 c6b79058705178f52bdf6fa5c04f1aa5 644 SUPERFAMILY SSF51445 29 435 6.0E-104 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily COP00_16945 c6b79058705178f52bdf6fa5c04f1aa5 644 Gene3D G3DSA:3.20.20.300 30 420 4.5E-162 T 13-10-2018 IPR036962 Glycoside hydrolase, family 3, N-terminal domain superfamily GO:0004553|GO:0005975 COP00_16945 c6b79058705178f52bdf6fa5c04f1aa5 644 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 44 393 1.5E-118 T 13-10-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 COP00_07750 347bff8bb8e99b0a38efa898d6d1e0c5 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 223 243 4.9E-23 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_07750 347bff8bb8e99b0a38efa898d6d1e0c5 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 4.9E-23 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_07750 347bff8bb8e99b0a38efa898d6d1e0c5 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 4.9E-23 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_07750 347bff8bb8e99b0a38efa898d6d1e0c5 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 4.9E-23 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_07750 347bff8bb8e99b0a38efa898d6d1e0c5 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 4.9E-23 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_07750 347bff8bb8e99b0a38efa898d6d1e0c5 264 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 4.9E-23 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_07750 347bff8bb8e99b0a38efa898d6d1e0c5 264 Gene3D G3DSA:3.40.50.720 2 263 1.5E-62 T 13-10-2018 COP00_07750 347bff8bb8e99b0a38efa898d6d1e0c5 264 Pfam PF00106 short chain dehydrogenase 8 196 2.5E-40 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_07750 347bff8bb8e99b0a38efa898d6d1e0c5 264 SUPERFAMILY SSF51735 6 260 1.28E-58 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily COP00_07750 347bff8bb8e99b0a38efa898d6d1e0c5 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 1.7E-5 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_07750 347bff8bb8e99b0a38efa898d6d1e0c5 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 1.7E-5 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_07750 347bff8bb8e99b0a38efa898d6d1e0c5 264 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 1.7E-5 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_02345 bf507679d33d5ee69e8b5cd308ea53f4 90 Pfam PF13143 Protein of unknown function (DUF3986) 1 85 9.7E-31 T 13-10-2018 IPR025047 Protein of unknown function DUF3986 COP00_14800 b3251f56b0ecec10d358336794ff0444 326 SUPERFAMILY SSF55874 158 322 5.52E-33 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily COP00_14800 b3251f56b0ecec10d358336794ff0444 326 Gene3D G3DSA:3.30.565.10 142 320 3.5E-32 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily COP00_14800 b3251f56b0ecec10d358336794ff0444 326 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 215 322 7.3E-20 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase COP00_14800 b3251f56b0ecec10d358336794ff0444 326 SMART SM00387 214 326 5.1E-24 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase COP00_14800 b3251f56b0ecec10d358336794ff0444 326 PRINTS PR00344 Bacterial sensor protein C-terminal signature 252 266 8.7E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 COP00_14800 b3251f56b0ecec10d358336794ff0444 326 PRINTS PR00344 Bacterial sensor protein C-terminal signature 286 304 8.7E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 COP00_14800 b3251f56b0ecec10d358336794ff0444 326 PRINTS PR00344 Bacterial sensor protein C-terminal signature 270 280 8.7E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 COP00_14800 b3251f56b0ecec10d358336794ff0444 326 PRINTS PR00344 Bacterial sensor protein C-terminal signature 310 323 8.7E-11 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 COP00_03685 86fa07ff55884815b1f140fb902798bc 95 SUPERFAMILY SSF89360 2 83 1.02E-11 T 13-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 COP00_03685 86fa07ff55884815b1f140fb902798bc 95 PIRSF PIRSF034852 1 95 1.5E-40 T 13-10-2018 IPR008326 Uncharacterised conserved protein UCP034852 COP00_15115 539dd9a421a86e17e75b6e16469b8a9d 45 Pfam PF14149 YhfH-like protein 3 39 5.5E-19 T 13-10-2018 IPR025432 YhfH-like protein COP00_04660 0f1ba7c58376777d205fbe8c784c5ea7 123 SUPERFAMILY SSF49373 47 120 5.49E-11 T 13-10-2018 IPR008964 Invasin/intimin cell-adhesion fragments COP00_04660 0f1ba7c58376777d205fbe8c784c5ea7 123 Pfam PF02368 Bacterial Ig-like domain (group 2) 74 110 4.6E-6 T 13-10-2018 IPR003343 Bacterial Ig-like, group 2 COP00_04660 0f1ba7c58376777d205fbe8c784c5ea7 123 Gene3D G3DSA:2.60.40.1080 38 123 5.2E-8 T 13-10-2018 COP00_11180 59610cc241b65eef9dcc0b4c7b40c280 285 Pfam PF13349 Putative adhesin 46 284 1.2E-46 T 13-10-2018 IPR025164 Putative adhesin COP00_11180 59610cc241b65eef9dcc0b4c7b40c280 285 Gene3D G3DSA:2.160.20.120 30 247 3.9E-6 T 13-10-2018 COP00_16605 9a59162a7811072d713a05c2368eb4f5 59 Gene3D G3DSA:1.20.5.1030 2 58 1.2E-17 T 13-10-2018 IPR038379 SecE superfamily COP00_16605 9a59162a7811072d713a05c2368eb4f5 59 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 5 57 9.9E-20 T 13-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 COP00_16605 9a59162a7811072d713a05c2368eb4f5 59 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 3 58 6.0E-23 T 13-10-2018 IPR005807 SecE subunit of protein translocation complex, bacterial-like GO:0009306|GO:0015450|GO:0016021 COP00_16605 9a59162a7811072d713a05c2368eb4f5 59 Hamap MF_00422 Protein translocase subunit SecE [secE]. 1 56 12.935 T 13-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 COP00_16605 9a59162a7811072d713a05c2368eb4f5 59 ProSitePatterns PS01067 Protein secE/sec61-gamma signature. 6 34 - T 13-10-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 COP00_03880 8ecdb4debf3a58d8aaaf5e98fa4af86a 141 SUPERFAMILY SSF52788 6 137 1.96E-45 T 13-10-2018 IPR036196 Phosphotyrosine protein phosphatase I superfamily COP00_03880 8ecdb4debf3a58d8aaaf5e98fa4af86a 141 TIGRFAM TIGR02691 arsC_pI258_fam: arsenate reductase (thioredoxin) 8 136 6.6E-72 T 13-10-2018 IPR014064 Arsenate reductase ArsC GO:0004725|GO:0030612|GO:0046685 COP00_03880 8ecdb4debf3a58d8aaaf5e98fa4af86a 141 SMART SM00226 6 139 3.8E-60 T 13-10-2018 IPR023485 Phosphotyrosine protein phosphatase I COP00_03880 8ecdb4debf3a58d8aaaf5e98fa4af86a 141 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 8 136 1.1E-23 T 13-10-2018 IPR023485 Phosphotyrosine protein phosphatase I COP00_03880 8ecdb4debf3a58d8aaaf5e98fa4af86a 141 Gene3D G3DSA:3.40.50.2300 3 141 1.9E-58 T 13-10-2018 COP00_03880 8ecdb4debf3a58d8aaaf5e98fa4af86a 141 Hamap MF_01624 Arsenate reductase [arsC]. 3 139 43.95 T 13-10-2018 IPR014064 Arsenate reductase ArsC GO:0004725|GO:0030612|GO:0046685 COP00_16875 27bdb91e7955df404cffaf5db70d4b89 237 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 43 226 5.9E-48 T 13-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 COP00_16875 27bdb91e7955df404cffaf5db70d4b89 237 SMART SM00646 115 226 2.8E-36 T 13-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 COP00_16875 27bdb91e7955df404cffaf5db70d4b89 237 Gene3D G3DSA:3.40.630.40 39 234 8.8E-54 T 13-10-2018 COP00_16875 27bdb91e7955df404cffaf5db70d4b89 237 SUPERFAMILY SSF53187 41 230 2.45E-51 T 13-10-2018 COP00_16875 27bdb91e7955df404cffaf5db70d4b89 237 TIGRFAM TIGR02883 spore_cwlD: N-acetylmuramoyl-L-alanine amidase CwlD 41 228 1.9E-85 T 13-10-2018 IPR014234 N-acetylmuramoyl-L-alanine amidase CwlD MetaCyc: PWY-7883 COP00_12560 179dfc4a5a2708655da307ba1363fc73 699 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 557 579 - T 13-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 COP00_12560 179dfc4a5a2708655da307ba1363fc73 699 Pfam PF08343 Ribonucleotide reductase N-terminal 8 88 6.2E-29 T 13-10-2018 IPR013554 Ribonucleotide reductase N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 COP00_12560 179dfc4a5a2708655da307ba1363fc73 699 Pfam PF02867 Ribonucleotide reductase, barrel domain 167 683 4.4E-137 T 13-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 COP00_12560 179dfc4a5a2708655da307ba1363fc73 699 PRINTS PR01183 Ribonucleotide reductase large chain signature 486 509 3.0E-27 T 13-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 COP00_12560 179dfc4a5a2708655da307ba1363fc73 699 PRINTS PR01183 Ribonucleotide reductase large chain signature 568 595 3.0E-27 T 13-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 COP00_12560 179dfc4a5a2708655da307ba1363fc73 699 PRINTS PR01183 Ribonucleotide reductase large chain signature 458 480 3.0E-27 T 13-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 COP00_12560 179dfc4a5a2708655da307ba1363fc73 699 PRINTS PR01183 Ribonucleotide reductase large chain signature 242 261 3.0E-27 T 13-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 COP00_12560 179dfc4a5a2708655da307ba1363fc73 699 PRINTS PR01183 Ribonucleotide reductase large chain signature 375 386 3.0E-27 T 13-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 COP00_12560 179dfc4a5a2708655da307ba1363fc73 699 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 90 162 7.1E-16 T 13-10-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 COP00_12560 179dfc4a5a2708655da307ba1363fc73 699 SUPERFAMILY SSF51998 166 688 1.07E-165 T 13-10-2018 COP00_12560 179dfc4a5a2708655da307ba1363fc73 699 Gene3D G3DSA:3.20.70.20 151 685 5.1E-186 T 13-10-2018 COP00_12560 179dfc4a5a2708655da307ba1363fc73 699 TIGRFAM TIGR04170 RNR_1b_NrdE: ribonucleoside-diphosphate reductase, class 1b, alpha subunit 7 699 0.0 T 13-10-2018 IPR026459 Ribonucleotide reductase, class 1b, subunit NrdE KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 COP00_12560 179dfc4a5a2708655da307ba1363fc73 699 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 94 687 2.7E-172 T 13-10-2018 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 COP00_12560 179dfc4a5a2708655da307ba1363fc73 699 SUPERFAMILY SSF48168 7 165 3.92E-47 T 13-10-2018 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 COP00_12560 179dfc4a5a2708655da307ba1363fc73 699 Gene3D G3DSA:1.10.1650.20 285 337 5.1E-186 T 13-10-2018 COP00_12805 f3f9eceeebc254a36ea88a61b28171c1 252 PRINTS PR01543 Arylamine N-acetyltransferase signature 102 127 1.6E-7 T 13-10-2018 IPR001447 Arylamine N-acetyltransferase GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 COP00_12805 f3f9eceeebc254a36ea88a61b28171c1 252 PRINTS PR01543 Arylamine N-acetyltransferase signature 21 44 1.6E-7 T 13-10-2018 IPR001447 Arylamine N-acetyltransferase GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 COP00_12805 f3f9eceeebc254a36ea88a61b28171c1 252 PRINTS PR01543 Arylamine N-acetyltransferase signature 69 91 1.6E-7 T 13-10-2018 IPR001447 Arylamine N-acetyltransferase GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 COP00_12805 f3f9eceeebc254a36ea88a61b28171c1 252 PRINTS PR01543 Arylamine N-acetyltransferase signature 45 68 1.6E-7 T 13-10-2018 IPR001447 Arylamine N-acetyltransferase GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 COP00_12805 f3f9eceeebc254a36ea88a61b28171c1 252 Gene3D G3DSA:3.30.2140.20 1 251 3.9E-75 T 13-10-2018 COP00_12805 f3f9eceeebc254a36ea88a61b28171c1 252 Pfam PF00797 N-acetyltransferase 24 250 1.0E-55 T 13-10-2018 IPR001447 Arylamine N-acetyltransferase GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 COP00_12805 f3f9eceeebc254a36ea88a61b28171c1 252 SUPERFAMILY SSF54001 2 250 1.59E-62 T 13-10-2018 IPR038765 Papain-like cysteine peptidase superfamily COP00_01855 c6cdfda0a08271f23dccd48fe935ae8f 175 Gene3D G3DSA:3.40.1580.10 36 169 2.2E-19 T 13-10-2018 IPR037883 Knr4/Smi1-like domain superfamily COP00_01855 c6cdfda0a08271f23dccd48fe935ae8f 175 SMART SM00860 44 152 2.2E-10 T 13-10-2018 IPR018958 Knr4/Smi1-like domain COP00_01855 c6cdfda0a08271f23dccd48fe935ae8f 175 SUPERFAMILY SSF160631 38 166 3.53E-21 T 13-10-2018 COP00_01855 c6cdfda0a08271f23dccd48fe935ae8f 175 Pfam PF14568 SMI1-KNR4 cell-wall 47 124 1.7E-9 T 13-10-2018 COP00_00190 ebe65bfd713c1c44ee9e47a64917bc3d 699 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 454 471 - T 13-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 COP00_00190 ebe65bfd713c1c44ee9e47a64917bc3d 699 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 552 674 1.3E-49 T 13-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 COP00_00190 ebe65bfd713c1c44ee9e47a64917bc3d 699 Pfam PF02378 Phosphotransferase system, EIIC 14 354 2.3E-98 T 13-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 COP00_00190 ebe65bfd713c1c44ee9e47a64917bc3d 699 SUPERFAMILY SSF55604 443 514 1.31E-20 T 13-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 COP00_00190 ebe65bfd713c1c44ee9e47a64917bc3d 699 Gene3D G3DSA:2.70.70.10 538 699 3.1E-63 T 13-10-2018 IPR011055 Duplicated hybrid motif COP00_00190 ebe65bfd713c1c44ee9e47a64917bc3d 699 SUPERFAMILY SSF51261 544 695 2.96E-53 T 13-10-2018 IPR011055 Duplicated hybrid motif COP00_00190 ebe65bfd713c1c44ee9e47a64917bc3d 699 Pfam PF00367 phosphotransferase system, EIIB 444 476 4.2E-14 T 13-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 COP00_00190 ebe65bfd713c1c44ee9e47a64917bc3d 699 TIGRFAM TIGR00852 pts-Glc: PTS system, maltose and glucose-specific subfamily, IIC component 64 364 5.3E-96 T 13-10-2018 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component GO:0008982|GO:0009401|GO:0016021 COP00_00190 ebe65bfd713c1c44ee9e47a64917bc3d 699 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 553 672 1.8E-46 T 13-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 COP00_00190 ebe65bfd713c1c44ee9e47a64917bc3d 699 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 614 626 - T 13-10-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 COP00_00190 ebe65bfd713c1c44ee9e47a64917bc3d 699 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 413 500 1.5E-28 T 13-10-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 COP00_00190 ebe65bfd713c1c44ee9e47a64917bc3d 699 TIGRFAM TIGR02002 PTS-II-BC-glcB: PTS system, glucose-specific IIBC component 2 516 2.5E-251 T 13-10-2018 IPR011299 PTS system glucose-specific IIBC component GO:0005355|GO:0016021|GO:1904659 COP00_00190 ebe65bfd713c1c44ee9e47a64917bc3d 699 Gene3D G3DSA:3.30.1360.60 438 517 4.6E-29 T 13-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 COP00_04390 0dd5b31dc83959742b3377c58dcb53af 680 SUPERFAMILY SSF53706 12 565 4.84E-165 T 13-10-2018 COP00_04390 0dd5b31dc83959742b3377c58dcb53af 680 SUPERFAMILY SSF50692 527 678 9.72E-31 T 13-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily COP00_04390 0dd5b31dc83959742b3377c58dcb53af 680 Gene3D G3DSA:3.40.228.10 145 543 3.6E-153 T 13-10-2018 COP00_04390 0dd5b31dc83959742b3377c58dcb53af 680 Gene3D G3DSA:2.20.25.90 4 69 2.6E-17 T 13-10-2018 COP00_04390 0dd5b31dc83959742b3377c58dcb53af 680 SMART SM00926 9 64 4.5E-19 T 13-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 COP00_04390 0dd5b31dc83959742b3377c58dcb53af 680 Pfam PF01568 Molydopterin dinucleotide binding domain 565 669 9.1E-18 T 13-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 COP00_04390 0dd5b31dc83959742b3377c58dcb53af 680 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 12 63 1.0E-17 T 13-10-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 COP00_04390 0dd5b31dc83959742b3377c58dcb53af 680 Gene3D G3DSA:3.30.2070.10 433 521 3.6E-153 T 13-10-2018 COP00_04390 0dd5b31dc83959742b3377c58dcb53af 680 Pfam PF00384 Molybdopterin oxidoreductase 67 473 7.9E-62 T 13-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 COP00_04390 0dd5b31dc83959742b3377c58dcb53af 680 Gene3D G3DSA:3.40.50.740 78 478 3.6E-153 T 13-10-2018 COP00_04390 0dd5b31dc83959742b3377c58dcb53af 680 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 418 435 - T 13-10-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 COP00_04390 0dd5b31dc83959742b3377c58dcb53af 680 Gene3D G3DSA:2.40.40.20 545 680 7.3E-28 T 13-10-2018 COP00_12590 cb69036f95534f2ea622269628100a66 177 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 14 165 1.5E-14 T 13-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 COP00_12590 cb69036f95534f2ea622269628100a66 177 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 126 163 - T 13-10-2018 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 COP00_12590 cb69036f95534f2ea622269628100a66 177 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 15 28 7.4E-7 T 13-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 COP00_12590 cb69036f95534f2ea622269628100a66 177 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 120 139 7.4E-7 T 13-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 COP00_12590 cb69036f95534f2ea622269628100a66 177 SUPERFAMILY SSF53098 13 168 5.69E-19 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily COP00_12590 cb69036f95534f2ea622269628100a66 177 Gene3D G3DSA:3.30.420.10 12 176 1.8E-36 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 COP00_12550 d6561543efbc771e9fb458f076378f13 112 Pfam PF06600 Protein of unknown function (DUF1140) 8 106 1.1E-29 T 13-10-2018 IPR009520 Protein of unknown function DUF1140 COP00_01180 8924b672729bd76c627132da37edb31a 220 TIGRFAM TIGR00719 sda_beta: L-serine dehydratase, iron-sulfur-dependent, beta subunit 1 206 2.3E-104 T 13-10-2018 IPR004643 Iron-sulphur-dependent L-serine dehydratase beta subunit GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 COP00_01180 8924b672729bd76c627132da37edb31a 220 Pfam PF03315 Serine dehydratase beta chain 5 131 4.1E-15 T 13-10-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 COP00_01180 8924b672729bd76c627132da37edb31a 220 PIRSF PIRSF036692 1 220 1.5E-104 T 13-10-2018 IPR004643 Iron-sulphur-dependent L-serine dehydratase beta subunit GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 COP00_01180 8924b672729bd76c627132da37edb31a 220 SUPERFAMILY SSF55021 137 218 8.33E-16 T 13-10-2018 COP00_01180 8924b672729bd76c627132da37edb31a 220 Pfam PF01842 ACT domain 149 210 4.1E-9 T 13-10-2018 IPR002912 ACT domain COP00_01180 8924b672729bd76c627132da37edb31a 220 SUPERFAMILY SSF143548 19 137 6.67E-32 T 13-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 COP00_01180 8924b672729bd76c627132da37edb31a 220 Gene3D G3DSA:3.30.1330.90 13 134 1.4E-22 T 13-10-2018 IPR029009 Allosteric substrate binding domain superfamily Reactome: R-HSA-977347 COP00_01180 8924b672729bd76c627132da37edb31a 220 Gene3D G3DSA:3.30.70.260 139 217 9.9E-13 T 13-10-2018 COP00_01645 35573d411e1bfb23ea3fcc3b0dd8282a 404 SUPERFAMILY SSF53633 3 247 1.23E-66 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily COP00_01645 35573d411e1bfb23ea3fcc3b0dd8282a 404 SUPERFAMILY SSF55021 260 346 6.41E-11 T 13-10-2018 COP00_01645 35573d411e1bfb23ea3fcc3b0dd8282a 404 Gene3D G3DSA:3.30.2130.10 257 404 9.0E-31 T 13-10-2018 COP00_01645 35573d411e1bfb23ea3fcc3b0dd8282a 404 PIRSF PIRSF000726 62 404 7.9E-87 T 13-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 COP00_01645 35573d411e1bfb23ea3fcc3b0dd8282a 404 PIRSF PIRSF000726 1 65 2.4E-8 T 13-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 COP00_01645 35573d411e1bfb23ea3fcc3b0dd8282a 404 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 66 401 7.7E-91 T 13-10-2018 IPR001341 Aspartate kinase GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 COP00_01645 35573d411e1bfb23ea3fcc3b0dd8282a 404 ProSitePatterns PS00324 Aspartokinase signature. 5 13 - T 13-10-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 COP00_01645 35573d411e1bfb23ea3fcc3b0dd8282a 404 Gene3D G3DSA:3.40.1160.10 1 256 2.3E-81 T 13-10-2018 IPR036393 Acetylglutamate kinase-like superfamily COP00_01645 35573d411e1bfb23ea3fcc3b0dd8282a 404 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 2 403 9.1E-147 T 13-10-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6160|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153|MetaCyc: PWY-7977 COP00_01645 35573d411e1bfb23ea3fcc3b0dd8282a 404 SUPERFAMILY SSF55021 334 403 9.49E-16 T 13-10-2018 COP00_01645 35573d411e1bfb23ea3fcc3b0dd8282a 404 Pfam PF13840 ACT domain 336 398 5.0E-21 T 13-10-2018 IPR027795 CASTOR, ACT domain COP00_01645 35573d411e1bfb23ea3fcc3b0dd8282a 404 Pfam PF00696 Amino acid kinase family 2 235 1.0E-46 T 13-10-2018 IPR001048 Aspartate/glutamate/uridylate kinase Reactome: R-HSA-70614 COP00_21775 5a77339bbe89e84b265235db0214cc49 366 Gene3D G3DSA:1.10.230.10 215 317 2.1E-130 T 13-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain COP00_21775 5a77339bbe89e84b265235db0214cc49 366 SUPERFAMILY SSF48256 2 360 5.89E-117 T 13-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 COP00_21775 5a77339bbe89e84b265235db0214cc49 366 PRINTS PR00143 Citrate synthase signature 189 217 5.1E-33 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 COP00_21775 5a77339bbe89e84b265235db0214cc49 366 PRINTS PR00143 Citrate synthase signature 303 319 5.1E-33 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 COP00_21775 5a77339bbe89e84b265235db0214cc49 366 PRINTS PR00143 Citrate synthase signature 118 131 5.1E-33 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 COP00_21775 5a77339bbe89e84b265235db0214cc49 366 PRINTS PR00143 Citrate synthase signature 323 337 5.1E-33 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 COP00_21775 5a77339bbe89e84b265235db0214cc49 366 PRINTS PR00143 Citrate synthase signature 167 182 5.1E-33 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 COP00_21775 5a77339bbe89e84b265235db0214cc49 366 PRINTS PR00143 Citrate synthase signature 242 262 5.1E-33 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 COP00_21775 5a77339bbe89e84b265235db0214cc49 366 Gene3D G3DSA:1.10.580.10 15 343 2.1E-130 T 13-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 COP00_21775 5a77339bbe89e84b265235db0214cc49 366 PIRSF PIRSF001369 1 365 6.2E-135 T 13-10-2018 IPR024176 Citrate synthase, bacterial-type COP00_21775 5a77339bbe89e84b265235db0214cc49 366 ProSitePatterns PS00480 Citrate synthase signature. 249 261 - T 13-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 COP00_21775 5a77339bbe89e84b265235db0214cc49 366 Pfam PF00285 Citrate synthase, C-terminal domain 5 352 7.2E-116 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 COP00_20855 103cdc8578b9beadbf83b6751729f59e 127 Gene3D G3DSA:3.30.300.20 3 126 5.2E-26 T 13-10-2018 IPR015946 K homology domain-like, alpha/beta COP00_20855 103cdc8578b9beadbf83b6751729f59e 127 Pfam PF02566 OsmC-like protein 25 120 3.2E-17 T 13-10-2018 IPR003718 OsmC/Ohr family COP00_20855 103cdc8578b9beadbf83b6751729f59e 127 SUPERFAMILY SSF82784 7 126 3.93E-23 T 13-10-2018 IPR036102 OsmC/Ohr superfamily COP00_09530 8a7c21cbfc0d27a281e22cd8225d0e42 448 Pfam PF02447 GntP family permease 1 446 2.7E-164 T 13-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 COP00_09530 8a7c21cbfc0d27a281e22cd8225d0e42 448 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 1 447 8.1E-177 T 13-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 COP00_09530 8a7c21cbfc0d27a281e22cd8225d0e42 448 PIRSF PIRSF002746 1 448 1.1E-163 T 13-10-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 COP00_01585 c4ee41cb38d4f722bf7f7e4ecedbce0e 92 SUPERFAMILY SSF103007 3 92 2.35E-31 T 13-10-2018 IPR036746 TT1725-like superfamily COP00_01585 c4ee41cb38d4f722bf7f7e4ecedbce0e 92 Pfam PF04456 Protein of unknown function (DUF503) 2 87 8.1E-32 T 13-10-2018 IPR007546 Protein of unknown function DUF503 COP00_01585 c4ee41cb38d4f722bf7f7e4ecedbce0e 92 Gene3D G3DSA:3.30.70.1120 1 92 1.7E-25 T 13-10-2018 IPR036746 TT1725-like superfamily COP00_04535 9105bb8e2bf9a5eb1b95286a906abbe4 448 Gene3D G3DSA:1.20.1740.10 6 438 2.7E-70 T 13-10-2018 COP00_04535 9105bb8e2bf9a5eb1b95286a906abbe4 448 PIRSF PIRSF006060 2 441 6.0E-69 T 13-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 COP00_04535 9105bb8e2bf9a5eb1b95286a906abbe4 448 Pfam PF00324 Amino acid permease 18 407 1.2E-35 T 13-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 COP00_10905 2805d9677438dbe96f58207c58cd34b4 285 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 5 165 7.5E-28 T 13-10-2018 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 COP00_10905 2805d9677438dbe96f58207c58cd34b4 285 Gene3D G3DSA:3.30.390.50 180 273 6.0E-9 T 13-10-2018 COP00_10905 2805d9677438dbe96f58207c58cd34b4 285 SUPERFAMILY SSF56176 1 165 1.39E-33 T 13-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 COP00_10905 2805d9677438dbe96f58207c58cd34b4 285 SUPERFAMILY SSF55447 178 276 7.2E-15 T 13-10-2018 IPR036683 CO dehydrogenase flavoprotein, C-terminal domain superfamily COP00_10905 2805d9677438dbe96f58207c58cd34b4 285 Pfam PF03450 CO dehydrogenase flavoprotein C-terminal domain 203 271 8.2E-6 T 13-10-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal COP00_10905 2805d9677438dbe96f58207c58cd34b4 285 SMART SM01092 179 274 7.7E-9 T 13-10-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal COP00_10905 2805d9677438dbe96f58207c58cd34b4 285 Gene3D G3DSA:3.30.465.10 4 171 8.1E-32 T 13-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 COP00_16890 b18af5f3b193b9586fd855f1370c87cb 199 SMART SM01251 17 196 1.0E-114 T 13-10-2018 IPR024164 KinB-signalling pathway activation protein GO:0045881 COP00_16890 b18af5f3b193b9586fd855f1370c87cb 199 PIRSF PIRSF029886 1 199 2.4E-96 T 13-10-2018 IPR024164 KinB-signalling pathway activation protein GO:0045881 COP00_16890 b18af5f3b193b9586fd855f1370c87cb 199 Pfam PF14089 KinB-signalling pathway activation in sporulation 17 195 2.1E-75 T 13-10-2018 IPR024164 KinB-signalling pathway activation protein GO:0045881 COP00_04850 f6471817e2763a1c8d6e124aef8d6394 494 Gene3D G3DSA:3.40.605.10 24 487 1.4E-206 T 13-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 COP00_04850 f6471817e2763a1c8d6e124aef8d6394 494 Gene3D G3DSA:3.40.309.10 270 459 1.4E-206 T 13-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 COP00_04850 f6471817e2763a1c8d6e124aef8d6394 494 SUPERFAMILY SSF53720 14 492 1.03E-188 T 13-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 COP00_04850 f6471817e2763a1c8d6e124aef8d6394 494 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 265 272 - T 13-10-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0016491|GO:0055114 COP00_04850 f6471817e2763a1c8d6e124aef8d6394 494 Pfam PF00171 Aldehyde dehydrogenase family 29 489 1.3E-193 T 13-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 COP00_04850 f6471817e2763a1c8d6e124aef8d6394 494 PIRSF PIRSF036492 32 493 5.9E-86 T 13-10-2018 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent GO:0006081|GO:0055114 COP00_07685 a3b792b9490ec0666aa12f7d88e4b218 137 SUPERFAMILY SSF46785 1 62 1.08E-15 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_07685 a3b792b9490ec0666aa12f7d88e4b218 137 Gene3D G3DSA:1.10.10.10 1 52 1.0E-18 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_07685 a3b792b9490ec0666aa12f7d88e4b218 137 SMART SM00344 2 109 4.1E-28 T 13-10-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 COP00_07685 a3b792b9490ec0666aa12f7d88e4b218 137 Pfam PF13404 AsnC-type helix-turn-helix domain 2 43 1.0E-13 T 13-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 COP00_07685 a3b792b9490ec0666aa12f7d88e4b218 137 SUPERFAMILY SSF54909 63 134 9.92E-8 T 13-10-2018 IPR011008 Dimeric alpha-beta barrel COP00_07685 a3b792b9490ec0666aa12f7d88e4b218 137 Pfam PF01037 Lrp/AsnC ligand binding domain 70 127 6.4E-7 T 13-10-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain COP00_07685 a3b792b9490ec0666aa12f7d88e4b218 137 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 2 18 2.3E-10 T 13-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 COP00_07685 a3b792b9490ec0666aa12f7d88e4b218 137 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 18 29 2.3E-10 T 13-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 COP00_07685 a3b792b9490ec0666aa12f7d88e4b218 137 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 29 48 2.3E-10 T 13-10-2018 IPR000485 AsnC-type HTH domain GO:0043565 COP00_07685 a3b792b9490ec0666aa12f7d88e4b218 137 Gene3D G3DSA:3.30.70.920 53 137 8.7E-14 T 13-10-2018 COP00_02500 a44df7916b70f596e3899519d2f6296f 67 SUPERFAMILY SSF160570 7 66 1.96E-28 T 13-10-2018 IPR037261 YonK superfamily COP00_02500 a44df7916b70f596e3899519d2f6296f 67 Pfam PF09642 YonK protein 7 67 5.8E-34 T 13-10-2018 IPR018600 Bacillus phage SPbeta, YonK COP00_02500 a44df7916b70f596e3899519d2f6296f 67 Gene3D G3DSA:2.40.50.280 5 67 6.1E-29 T 13-10-2018 IPR037261 YonK superfamily COP00_09390 af0094a593a1c6657a7ed821e5aa4ed6 432 Pfam PF01225 Mur ligase family, catalytic domain 4 101 1.8E-23 T 13-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 COP00_09390 af0094a593a1c6657a7ed821e5aa4ed6 432 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 4 430 1.7E-140 T 13-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 COP00_09390 af0094a593a1c6657a7ed821e5aa4ed6 432 SUPERFAMILY SSF53623 87 293 1.26E-58 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 COP00_09390 af0094a593a1c6657a7ed821e5aa4ed6 432 SUPERFAMILY SSF53244 294 429 2.56E-36 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 COP00_09390 af0094a593a1c6657a7ed821e5aa4ed6 432 Gene3D G3DSA:3.40.50.720 3 89 1.5E-20 T 13-10-2018 COP00_09390 af0094a593a1c6657a7ed821e5aa4ed6 432 Gene3D G3DSA:3.90.190.20 293 430 9.6E-39 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 COP00_09390 af0094a593a1c6657a7ed821e5aa4ed6 432 Gene3D G3DSA:3.40.1190.10 91 292 2.9E-53 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 COP00_09390 af0094a593a1c6657a7ed821e5aa4ed6 432 SUPERFAMILY SSF51984 4 88 4.97E-21 T 13-10-2018 COP00_09390 af0094a593a1c6657a7ed821e5aa4ed6 432 Pfam PF08245 Mur ligase middle domain 106 275 1.8E-25 T 13-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 COP00_09390 af0094a593a1c6657a7ed821e5aa4ed6 432 Pfam PF02875 Mur ligase family, glutamate ligase domain 295 377 6.7E-18 T 13-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 COP00_09390 af0094a593a1c6657a7ed821e5aa4ed6 432 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 1 432 34.307 T 13-10-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 COP00_17840 cbe7f9057b7d86ebcdd8fcf9ec8a569d 139 SUPERFAMILY SSF55331 2 124 4.92E-40 T 13-10-2018 IPR014347 Tautomerase/MIF superfamily COP00_17840 cbe7f9057b7d86ebcdd8fcf9ec8a569d 139 Gene3D G3DSA:3.30.429.10 1 129 2.7E-50 T 13-10-2018 IPR014347 Tautomerase/MIF superfamily COP00_17840 cbe7f9057b7d86ebcdd8fcf9ec8a569d 139 Pfam PF14552 Tautomerase enzyme 38 118 1.6E-31 T 13-10-2018 IPR037479 Tautomerase, MSAD family COP00_17110 2bed064351af349d6e05812336b0cb70 223 Gene3D G3DSA:3.40.50.2300 1 124 8.8E-32 T 13-10-2018 COP00_17110 2bed064351af349d6e05812336b0cb70 223 SUPERFAMILY SSF46894 125 217 9.35E-16 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 COP00_17110 2bed064351af349d6e05812336b0cb70 223 SMART SM00862 144 217 5.9E-15 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 COP00_17110 2bed064351af349d6e05812336b0cb70 223 SMART SM00448 4 112 2.3E-33 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 COP00_17110 2bed064351af349d6e05812336b0cb70 223 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 217 4.9E-16 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 COP00_17110 2bed064351af349d6e05812336b0cb70 223 Pfam PF00072 Response regulator receiver domain 6 111 1.0E-23 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 COP00_17110 2bed064351af349d6e05812336b0cb70 223 Gene3D G3DSA:1.10.10.10 125 222 2.8E-18 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_17110 2bed064351af349d6e05812336b0cb70 223 SUPERFAMILY SSF52172 1 121 6.55E-33 T 13-10-2018 IPR011006 CheY-like superfamily COP00_22465 a1f15c4d2875dc2fdbe62438f2a4abe8 1166 Pfam PF12705 PD-(D/E)XK nuclease superfamily 791 1131 3.0E-60 T 13-10-2018 IPR038726 PD-(D/E)XK endonuclease-like domain, AddAB-type COP00_22465 a1f15c4d2875dc2fdbe62438f2a4abe8 1166 Gene3D G3DSA:3.40.50.300 1 136 8.7E-32 T 13-10-2018 COP00_22465 a1f15c4d2875dc2fdbe62438f2a4abe8 1166 Gene3D G3DSA:3.40.50.300 137 277 8.4E-31 T 13-10-2018 COP00_22465 a1f15c4d2875dc2fdbe62438f2a4abe8 1166 Gene3D G3DSA:3.40.50.300 279 428 8.9E-30 T 13-10-2018 COP00_22465 a1f15c4d2875dc2fdbe62438f2a4abe8 1166 Gene3D G3DSA:3.40.50.300 565 700 3.8E-45 T 13-10-2018 COP00_22465 a1f15c4d2875dc2fdbe62438f2a4abe8 1166 TIGRFAM TIGR02773 addB_Gpos: helicase-exonuclease AddAB, AddB subunit 1 1162 0.0 T 13-10-2018 IPR014140 DNA helicase subunit AddB GO:0000724|GO:0016788 COP00_22465 a1f15c4d2875dc2fdbe62438f2a4abe8 1166 Pfam PF04257 Exodeoxyribonuclease V, gamma subunit 299 690 2.1E-12 T 13-10-2018 COP00_22465 a1f15c4d2875dc2fdbe62438f2a4abe8 1166 SUPERFAMILY SSF52540 297 697 3.64E-58 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_22465 a1f15c4d2875dc2fdbe62438f2a4abe8 1166 Hamap MF_01452 ATP-dependent helicase/deoxyribonuclease subunit B [addB]. 1 1162 62.851 T 13-10-2018 IPR014140 DNA helicase subunit AddB GO:0000724|GO:0016788 COP00_14890 2c61586544c42e9e6c7a8b7a8a4848d7 195 Gene3D G3DSA:2.60.40.1240 58 190 6.1E-28 T 13-10-2018 IPR029050 Immunoprotective extracellular, immunoglobulin-like domain superfamily COP00_14890 2c61586544c42e9e6c7a8b7a8a4848d7 195 Pfam PF11611 Domain of unknown function (DUF4352) 59 185 2.0E-18 T 13-10-2018 IPR029051 Domain of unknown function DUF4352 COP00_15890 be8ee82d62b815cab11cc3b1fb7b7c83 283 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 3 154 7.5E-18 T 13-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 COP00_15890 be8ee82d62b815cab11cc3b1fb7b7c83 283 SUPERFAMILY SSF54427 164 280 1.54E-8 T 13-10-2018 IPR032710 NTF2-like domain superfamily COP00_15890 be8ee82d62b815cab11cc3b1fb7b7c83 283 Pfam PF08281 Sigma-70, region 4 101 152 1.3E-8 T 13-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 COP00_15890 be8ee82d62b815cab11cc3b1fb7b7c83 283 Gene3D G3DSA:1.10.1740.10 1 69 3.3E-7 T 13-10-2018 COP00_15890 be8ee82d62b815cab11cc3b1fb7b7c83 283 Pfam PF04542 Sigma-70 region 2 4 65 1.5E-8 T 13-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 COP00_15890 be8ee82d62b815cab11cc3b1fb7b7c83 283 Gene3D G3DSA:1.10.10.10 83 157 2.4E-8 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_15890 be8ee82d62b815cab11cc3b1fb7b7c83 283 SUPERFAMILY SSF88946 3 79 2.51E-11 T 13-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 COP00_15890 be8ee82d62b815cab11cc3b1fb7b7c83 283 SUPERFAMILY SSF88659 70 154 8.22E-11 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like COP00_15890 be8ee82d62b815cab11cc3b1fb7b7c83 283 TIGRFAM TIGR02957 SigX4: RNA polymerase sigma-70 factor, TIGR02957 family 2 281 4.0E-105 T 13-10-2018 IPR014303 RNA polymerase sigma-70, ECF type COP00_03610 c738473aa812c58d14d00ca1d48dafcc 55 Gene3D G3DSA:1.20.58.990 2 53 3.2E-11 T 13-10-2018 IPR037208 Aspartyl-phosphate phosphatase Spo0E-like superfamily GO:0043937 COP00_03610 c738473aa812c58d14d00ca1d48dafcc 55 SUPERFAMILY SSF140500 3 51 1.31E-15 T 13-10-2018 IPR037208 Aspartyl-phosphate phosphatase Spo0E-like superfamily GO:0043937 COP00_03610 c738473aa812c58d14d00ca1d48dafcc 55 Pfam PF09388 Spo0E like sporulation regulatory protein 6 47 3.0E-14 T 13-10-2018 IPR018540 Aspartyl-phosphate phosphatase Spo0E-like GO:0043937 COP00_08570 3c201c709e53b0a3c3950204ac5ad4e6 774 Gene3D G3DSA:3.30.230.10 591 774 7.2E-88 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup COP00_08570 3c201c709e53b0a3c3950204ac5ad4e6 774 TIGRFAM TIGR00763 lon: endopeptidase La 10 769 0.0 T 13-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 COP00_08570 3c201c709e53b0a3c3950204ac5ad4e6 774 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 568 770 1.7E-100 T 13-10-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 COP00_08570 3c201c709e53b0a3c3950204ac5ad4e6 774 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 350 487 9.9E-25 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 COP00_08570 3c201c709e53b0a3c3950204ac5ad4e6 774 SMART SM00382 346 494 2.6E-15 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_08570 3c201c709e53b0a3c3950204ac5ad4e6 774 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 701 720 3.7E-55 T 13-10-2018 COP00_08570 3c201c709e53b0a3c3950204ac5ad4e6 774 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 671 690 3.7E-55 T 13-10-2018 COP00_08570 3c201c709e53b0a3c3950204ac5ad4e6 774 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 354 373 3.7E-55 T 13-10-2018 COP00_08570 3c201c709e53b0a3c3950204ac5ad4e6 774 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 724 742 3.7E-55 T 13-10-2018 COP00_08570 3c201c709e53b0a3c3950204ac5ad4e6 774 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 593 609 3.7E-55 T 13-10-2018 COP00_08570 3c201c709e53b0a3c3950204ac5ad4e6 774 SUPERFAMILY SSF52540 314 586 1.07E-53 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_08570 3c201c709e53b0a3c3950204ac5ad4e6 774 SMART SM00464 8 200 1.3E-75 T 13-10-2018 IPR003111 Lon, substrate-binding domain COP00_08570 3c201c709e53b0a3c3950204ac5ad4e6 774 Hamap MF_01973 Lon protease [lon]. 9 770 73.754 T 13-10-2018 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 COP00_08570 3c201c709e53b0a3c3950204ac5ad4e6 774 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 674 682 - T 13-10-2018 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 COP00_08570 3c201c709e53b0a3c3950204ac5ad4e6 774 Gene3D G3DSA:1.10.8.60 490 582 3.1E-34 T 13-10-2018 COP00_08570 3c201c709e53b0a3c3950204ac5ad4e6 774 Gene3D G3DSA:2.30.130.40 1 114 1.7E-31 T 13-10-2018 COP00_08570 3c201c709e53b0a3c3950204ac5ad4e6 774 Gene3D G3DSA:3.40.50.300 312 489 4.5E-70 T 13-10-2018 COP00_08570 3c201c709e53b0a3c3950204ac5ad4e6 774 PIRSF PIRSF001174 1 773 0.0 T 13-10-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 COP00_08570 3c201c709e53b0a3c3950204ac5ad4e6 774 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 9 198 4.4E-41 T 13-10-2018 IPR003111 Lon, substrate-binding domain COP00_08570 3c201c709e53b0a3c3950204ac5ad4e6 774 SUPERFAMILY SSF54211 593 768 3.53E-58 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold COP00_08570 3c201c709e53b0a3c3950204ac5ad4e6 774 SUPERFAMILY SSF88697 9 198 6.46E-47 T 13-10-2018 IPR015947 PUA-like superfamily COP00_08570 3c201c709e53b0a3c3950204ac5ad4e6 774 Gene3D G3DSA:1.20.58.1480 119 243 5.8E-44 T 13-10-2018 COP00_15285 6cde0129f0fce972e32ef0b165738623 637 Hamap MF_01669 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase [iolD]. 2 637 61.067 T 13-10-2018 IPR023757 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase, Firmicutes GO:0000287|GO:0016787|GO:0019310|GO:0030976 KEGG: 00562+3.7.1.22 COP00_15285 6cde0129f0fce972e32ef0b165738623 637 SUPERFAMILY SSF52518 3 210 6.74E-30 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold COP00_15285 6cde0129f0fce972e32ef0b165738623 637 SUPERFAMILY SSF52467 211 379 3.48E-37 T 13-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily COP00_15285 6cde0129f0fce972e32ef0b165738623 637 SUPERFAMILY SSF52518 417 630 3.04E-57 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold COP00_15285 6cde0129f0fce972e32ef0b165738623 637 Gene3D G3DSA:3.40.50.970 2 206 9.0E-30 T 13-10-2018 COP00_15285 6cde0129f0fce972e32ef0b165738623 637 TIGRFAM TIGR04377 myo_inos_iolD: 3,5/4-trihydroxycyclohexa-1,2-dione hydrolase 6 634 9.6E-271 T 13-10-2018 IPR030817 3,5/4-Trihydroxycyclohexa-1,2-dione hydrolase GO:0016823|GO:0019310|GO:0030976 KEGG: 00562+3.7.1.22 COP00_15285 6cde0129f0fce972e32ef0b165738623 637 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 440 592 5.6E-42 T 13-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 COP00_15285 6cde0129f0fce972e32ef0b165738623 637 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 8 197 1.0E-29 T 13-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 COP00_15285 6cde0129f0fce972e32ef0b165738623 637 Gene3D G3DSA:3.40.50.1220 213 402 1.2E-33 T 13-10-2018 COP00_15285 6cde0129f0fce972e32ef0b165738623 637 Gene3D G3DSA:3.40.50.970 414 604 1.2E-47 T 13-10-2018 COP00_15285 6cde0129f0fce972e32ef0b165738623 637 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 476 495 - T 13-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 COP00_15285 6cde0129f0fce972e32ef0b165738623 637 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 221 354 4.3E-32 T 13-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 COP00_13655 f2ca4b201445d64c51ee48801ba8e108 148 Pfam PF17370 Family of unknown function (DUF5392) 6 142 4.7E-52 T 13-10-2018 IPR020205 Uncharacterised protein family, YwnF, transmembrane COP00_13655 f2ca4b201445d64c51ee48801ba8e108 148 ProDom PD087515 YWNF MEMBRANE SYNTHASE BH1886 BETA-KETOACYL TRANSMEMBRANE 1 143 2.0E-52 T 13-10-2018 IPR020205 Uncharacterised protein family, YwnF, transmembrane COP00_13505 a0c25e1881049b15ab4c4150767abeef 124 Pfam PF00699 Urease beta subunit 3 97 9.4E-41 T 13-10-2018 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 COP00_13505 a0c25e1881049b15ab4c4150767abeef 124 TIGRFAM TIGR00192 urease_beta: urease, beta subunit 1 102 8.8E-47 T 13-10-2018 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 COP00_13505 a0c25e1881049b15ab4c4150767abeef 124 Gene3D G3DSA:2.10.150.10 1 124 3.6E-48 T 13-10-2018 IPR036461 Urease, beta subunit superfamily KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 COP00_13505 a0c25e1881049b15ab4c4150767abeef 124 Hamap MF_01954 Urease subunit beta [ureB]. 1 101 28.776 T 13-10-2018 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 COP00_13505 a0c25e1881049b15ab4c4150767abeef 124 SUPERFAMILY SSF51278 1 119 4.19E-45 T 13-10-2018 IPR036461 Urease, beta subunit superfamily KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 COP00_05100 2143280f5fa40a914ba1475243fbae3d 226 Pfam PF01144 Coenzyme A transferase 9 203 2.7E-35 T 13-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 COP00_05100 2143280f5fa40a914ba1475243fbae3d 226 SUPERFAMILY SSF100950 8 213 1.74E-61 T 13-10-2018 IPR037171 NagB/RpiA transferase-like COP00_05100 2143280f5fa40a914ba1475243fbae3d 226 Gene3D G3DSA:3.40.1080.10 4 214 6.9E-87 T 13-10-2018 COP00_05100 2143280f5fa40a914ba1475243fbae3d 226 TIGRFAM TIGR02428 pcaJ_scoB_fam: 3-oxoacid CoA-transferase, B subunit 7 211 5.4E-91 T 13-10-2018 IPR012791 3-oxoacid CoA-transferase, subunit B GO:0008410 Reactome: R-HSA-77108 COP00_05100 2143280f5fa40a914ba1475243fbae3d 226 SMART SM00882 9 205 2.8E-58 T 13-10-2018 IPR004165 Coenzyme A transferase family I GO:0008410 Reactome: R-HSA-77108 COP00_02370 ab44a0074e710271fef0ad0d3c8b69da 225 Gene3D G3DSA:2.30.30.110 62 192 2.1E-8 T 13-10-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor COP00_02370 ab44a0074e710271fef0ad0d3c8b69da 225 SUPERFAMILY SSF50118 75 176 9.16E-9 T 13-10-2018 COP00_02370 ab44a0074e710271fef0ad0d3c8b69da 225 Pfam PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system 78 174 2.3E-5 T 13-10-2018 IPR003477 mRNA interferase PemK-like GO:0003677 COP00_21650 3cb26ab4c06b5b66179e55af8da0b46c 545 SMART SM00382 359 523 1.1E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_21650 3cb26ab4c06b5b66179e55af8da0b46c 545 SMART SM00382 28 243 1.6E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_21650 3cb26ab4c06b5b66179e55af8da0b46c 545 SUPERFAMILY SSF52540 5 266 2.37E-47 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_21650 3cb26ab4c06b5b66179e55af8da0b46c 545 Pfam PF00005 ABC transporter 353 479 3.9E-20 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 COP00_21650 3cb26ab4c06b5b66179e55af8da0b46c 545 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 COP00_21650 3cb26ab4c06b5b66179e55af8da0b46c 545 Pfam PF12848 ABC transporter 230 322 1.6E-21 T 13-10-2018 IPR032781 ABC-transporter extension domain COP00_21650 3cb26ab4c06b5b66179e55af8da0b46c 545 Pfam PF00005 ABC transporter 19 191 2.9E-25 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 COP00_21650 3cb26ab4c06b5b66179e55af8da0b46c 545 SUPERFAMILY SSF52540 317 536 4.32E-46 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_21650 3cb26ab4c06b5b66179e55af8da0b46c 545 ProSitePatterns PS00211 ABC transporters family signature. 451 465 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 COP00_21650 3cb26ab4c06b5b66179e55af8da0b46c 545 Gene3D G3DSA:3.40.50.300 2 285 7.1E-69 T 13-10-2018 COP00_21650 3cb26ab4c06b5b66179e55af8da0b46c 545 Gene3D G3DSA:3.40.50.300 299 544 7.0E-58 T 13-10-2018 COP00_11005 28ef3d931d3287d73dccfaeb6f8bd1e3 113 Pfam PF13155 Toprim-like 8 82 4.6E-5 T 13-10-2018 COP00_11005 28ef3d931d3287d73dccfaeb6f8bd1e3 113 Gene3D G3DSA:3.40.1360.20 1 113 3.6E-41 T 13-10-2018 COP00_11005 28ef3d931d3287d73dccfaeb6f8bd1e3 113 SMART SM00493 5 79 8.5E-7 T 13-10-2018 IPR006171 TOPRIM domain COP00_11005 28ef3d931d3287d73dccfaeb6f8bd1e3 113 SUPERFAMILY SSF110455 2 111 9.94E-33 T 13-10-2018 COP00_24420 1762aedc8bfb4d6535f6e9bd5284637d 451 ProSitePatterns PS00094 C-5 cytosine-specific DNA methylases active site. 167 179 - T 13-10-2018 IPR018117 DNA methylase, C-5 cytosine-specific, active site KEGG: 00270+2.1.1.37|Reactome: R-HSA-212300|Reactome: R-HSA-4655427|Reactome: R-HSA-5334118 COP00_24420 1762aedc8bfb4d6535f6e9bd5284637d 451 SUPERFAMILY SSF53335 105 448 9.8E-91 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase COP00_24420 1762aedc8bfb4d6535f6e9bd5284637d 451 TIGRFAM TIGR00675 dcm: DNA (cytosine-5-)-methyltransferase 107 443 3.4E-78 T 13-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 COP00_24420 1762aedc8bfb4d6535f6e9bd5284637d 451 Gene3D G3DSA:3.90.120.10 247 435 3.7E-92 T 13-10-2018 COP00_24420 1762aedc8bfb4d6535f6e9bd5284637d 451 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 206 220 7.7E-14 T 13-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 COP00_24420 1762aedc8bfb4d6535f6e9bd5284637d 451 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 106 122 7.7E-14 T 13-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 COP00_24420 1762aedc8bfb4d6535f6e9bd5284637d 451 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 252 265 7.7E-14 T 13-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 COP00_24420 1762aedc8bfb4d6535f6e9bd5284637d 451 Pfam PF00145 C-5 cytosine-specific DNA methylase 106 444 1.9E-79 T 13-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 COP00_24420 1762aedc8bfb4d6535f6e9bd5284637d 451 Gene3D G3DSA:3.40.50.150 108 442 3.7E-92 T 13-10-2018 COP00_00320 e00546f8a489d34a225b10d6dfa69ecd 147 Gene3D G3DSA:3.10.580.10 1 147 7.8E-61 T 13-10-2018 COP00_00320 e00546f8a489d34a225b10d6dfa69ecd 147 SUPERFAMILY SSF54631 12 140 2.59E-27 T 13-10-2018 COP00_16175 bc90b05d20bde5820467da5f573d775b 329 Pfam PF09115 DNA polymerase III, delta subunit, C terminal 240 325 3.2E-5 T 13-10-2018 IPR015199 DNA polymerase III, delta subunit, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 COP00_16175 bc90b05d20bde5820467da5f573d775b 329 SUPERFAMILY SSF52540 11 200 9.26E-42 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_16175 bc90b05d20bde5820467da5f573d775b 329 Pfam PF13177 DNA polymerase III, delta subunit 12 169 7.8E-58 T 13-10-2018 COP00_16175 bc90b05d20bde5820467da5f573d775b 329 Gene3D G3DSA:3.40.50.300 7 168 9.8E-52 T 13-10-2018 COP00_16175 bc90b05d20bde5820467da5f573d775b 329 TIGRFAM TIGR00678 holB: DNA polymerase III, delta' subunit 17 197 5.5E-63 T 13-10-2018 IPR004622 DNA polymerase III, delta prime subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 COP00_04790 1d45dc9053efdd30eb28d26fef3956e8 208 Pfam PF02525 Flavodoxin-like fold 3 203 1.0E-44 T 13-10-2018 IPR003680 Flavodoxin-like fold COP00_04790 1d45dc9053efdd30eb28d26fef3956e8 208 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 2 208 30.003 T 13-10-2018 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 COP00_04790 1d45dc9053efdd30eb28d26fef3956e8 208 Gene3D G3DSA:3.40.50.360 1 208 4.4E-61 T 13-10-2018 IPR029039 Flavoprotein-like superfamily COP00_04790 1d45dc9053efdd30eb28d26fef3956e8 208 SUPERFAMILY SSF52218 1 207 1.5E-50 T 13-10-2018 IPR029039 Flavoprotein-like superfamily COP00_23675 8df78120df6c16313602e2cc285d86ca 282 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 86 97 2.5E-9 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_23675 8df78120df6c16313602e2cc285d86ca 282 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 178 197 2.5E-9 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_23675 8df78120df6c16313602e2cc285d86ca 282 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 166 2.5E-9 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_23675 8df78120df6c16313602e2cc285d86ca 282 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 165 193 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 COP00_23675 8df78120df6c16313602e2cc285d86ca 282 Pfam PF00106 short chain dehydrogenase 11 219 3.4E-46 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_23675 8df78120df6c16313602e2cc285d86ca 282 SUPERFAMILY SSF51735 9 278 2.22E-69 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily COP00_23675 8df78120df6c16313602e2cc285d86ca 282 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 86 97 5.8E-32 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_23675 8df78120df6c16313602e2cc285d86ca 282 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 168 5.8E-32 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_23675 8df78120df6c16313602e2cc285d86ca 282 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 197 5.8E-32 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_23675 8df78120df6c16313602e2cc285d86ca 282 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 199 216 5.8E-32 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_23675 8df78120df6c16313602e2cc285d86ca 282 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 239 259 5.8E-32 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_23675 8df78120df6c16313602e2cc285d86ca 282 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 12 29 5.8E-32 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_23675 8df78120df6c16313602e2cc285d86ca 282 Gene3D G3DSA:3.40.50.720 3 282 2.3E-76 T 13-10-2018 COP00_15805 e2d47d4f5db879928460b011b763ac89 149 SUPERFAMILY SSF55653 56 148 1.44E-30 T 13-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily COP00_15805 e2d47d4f5db879928460b011b763ac89 149 Gene3D G3DSA:3.10.430.100 60 149 7.8E-34 T 13-10-2018 IPR036791 Ribosomal protein L9, C-terminal domain superfamily COP00_15805 e2d47d4f5db879928460b011b763ac89 149 SUPERFAMILY SSF55658 1 57 2.44E-18 T 13-10-2018 IPR009027 Ribosomal protein L9/RNase H1, N-terminal COP00_15805 e2d47d4f5db879928460b011b763ac89 149 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 147 4.8E-55 T 13-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 COP00_15805 e2d47d4f5db879928460b011b763ac89 149 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 46 1.0E-23 T 13-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_15805 e2d47d4f5db879928460b011b763ac89 149 Pfam PF03948 Ribosomal protein L9, C-terminal domain 63 146 7.1E-32 T 13-10-2018 IPR020069 Ribosomal protein L9, C-terminal COP00_15805 e2d47d4f5db879928460b011b763ac89 149 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 148 26.795 T 13-10-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 COP00_15805 e2d47d4f5db879928460b011b763ac89 149 Gene3D G3DSA:3.40.5.10 1 52 2.8E-26 T 13-10-2018 IPR036935 Ribosomal protein L9, N-terminal domain superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_15805 e2d47d4f5db879928460b011b763ac89 149 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 13-10-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_00460 5b52e103b93d55e9e755d0bf1d78fb60 629 Gene3D G3DSA:3.40.930.10 1 148 3.2E-50 T 13-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 COP00_00460 5b52e103b93d55e9e755d0bf1d78fb60 629 SUPERFAMILY SSF55804 1 147 1.96E-44 T 13-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 COP00_00460 5b52e103b93d55e9e755d0bf1d78fb60 629 SUPERFAMILY SSF52794 170 272 2.62E-38 T 13-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 COP00_00460 5b52e103b93d55e9e755d0bf1d78fb60 629 Pfam PF02378 Phosphotransferase system, EIIC 301 570 2.6E-11 T 13-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 COP00_00460 5b52e103b93d55e9e755d0bf1d78fb60 629 TIGRFAM TIGR00848 fruA: PTS system, fructose subfamily, IIA component 6 133 1.2E-39 T 13-10-2018 IPR004715 Phosphotransferase system, IIA component fructose subfamily GO:0008982|GO:0009401|GO:0016021 COP00_00460 5b52e103b93d55e9e755d0bf1d78fb60 629 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 291 623 1.9E-130 T 13-10-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 COP00_00460 5b52e103b93d55e9e755d0bf1d78fb60 629 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 5 147 9.9E-42 T 13-10-2018 IPR002178 PTS EIIA type-2 domain COP00_00460 5b52e103b93d55e9e755d0bf1d78fb60 629 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 173 263 8.5E-18 T 13-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 COP00_00460 5b52e103b93d55e9e755d0bf1d78fb60 629 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 52 68 - T 13-10-2018 IPR002178 PTS EIIA type-2 domain COP00_00460 5b52e103b93d55e9e755d0bf1d78fb60 629 Gene3D G3DSA:3.40.50.2300 167 272 3.6E-43 T 13-10-2018 COP00_00460 5b52e103b93d55e9e755d0bf1d78fb60 629 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 173 254 1.9E-31 T 13-10-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202 COP00_04280 6fdf240809eacb4d74e1bbe960d0d1e1 225 Gene3D G3DSA:3.30.240.20 79 154 2.7E-23 T 13-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily COP00_04280 6fdf240809eacb4d74e1bbe960d0d1e1 225 Pfam PF04239 Protein of unknown function (DUF421) 88 203 4.8E-33 T 13-10-2018 IPR007353 Protein of unknown function DUF421 COP00_04280 6fdf240809eacb4d74e1bbe960d0d1e1 225 Gene3D G3DSA:3.30.240.20 167 225 7.5E-17 T 13-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily COP00_18935 13cb56540788da8ba92334f3000076a4 356 PIRSF PIRSF006470 19 349 5.7E-128 T 13-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 COP00_18935 13cb56540788da8ba92334f3000076a4 356 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 49 331 1.0E-98 T 13-10-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0030288|GO:0055085 COP00_18935 13cb56540788da8ba92334f3000076a4 356 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 49 304 2.1E-96 T 13-10-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0030288|GO:0055085 COP00_18935 13cb56540788da8ba92334f3000076a4 356 Gene3D G3DSA:3.40.190.170 45 347 1.8E-93 T 13-10-2018 IPR038404 TRAP transporter solute receptor DctP superfamily COP00_13125 e02add8f242b77d9b745a20096344f2e 469 Pfam PF00271 Helicase conserved C-terminal domain 327 429 3.9E-11 T 13-10-2018 IPR001650 Helicase, C-terminal COP00_13125 e02add8f242b77d9b745a20096344f2e 469 Pfam PF04851 Type III restriction enzyme, res subunit 128 275 1.6E-9 T 13-10-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 COP00_13125 e02add8f242b77d9b745a20096344f2e 469 SMART SM00490 349 430 4.1E-9 T 13-10-2018 IPR001650 Helicase, C-terminal COP00_13125 e02add8f242b77d9b745a20096344f2e 469 SUPERFAMILY SSF52540 138 441 1.0E-32 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_13125 e02add8f242b77d9b745a20096344f2e 469 Gene3D G3DSA:3.40.50.300 128 296 6.7E-18 T 13-10-2018 COP00_13125 e02add8f242b77d9b745a20096344f2e 469 SMART SM00487 123 301 1.5E-13 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain COP00_13125 e02add8f242b77d9b745a20096344f2e 469 Gene3D G3DSA:3.40.50.300 311 445 5.9E-22 T 13-10-2018 COP00_11350 2b90fcaaad36a1021f6b234ff9165cf2 139 Pfam PF17428 Family of unknown function (DUF5412) 23 139 8.8E-37 T 13-10-2018 IPR035406 Protein of unknown function DUF5412 COP00_08255 a1e6ea359df10421cb411629c07c5c48 782 Pfam PF10141 Single-strand DNA-specific exonuclease, C terminal domain 566 769 3.4E-67 T 13-10-2018 IPR018779 Single-stranded-DNA-specific exonuclease RecJ, C-terminal COP00_08255 a1e6ea359df10421cb411629c07c5c48 782 Pfam PF01368 DHH family 83 225 1.4E-10 T 13-10-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 COP00_08255 a1e6ea359df10421cb411629c07c5c48 782 Gene3D G3DSA:3.10.310.30 319 442 1.7E-35 T 13-10-2018 COP00_08255 a1e6ea359df10421cb411629c07c5c48 782 SUPERFAMILY SSF64182 57 450 2.62E-124 T 13-10-2018 IPR038763 DHH phosphoesterase superfamily COP00_08255 a1e6ea359df10421cb411629c07c5c48 782 Gene3D G3DSA:3.90.1640.30 57 318 7.4E-99 T 13-10-2018 COP00_08255 a1e6ea359df10421cb411629c07c5c48 782 Pfam PF02272 DHHA1 domain 315 436 2.5E-22 T 13-10-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 COP00_08255 a1e6ea359df10421cb411629c07c5c48 782 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 28 559 2.4E-186 T 13-10-2018 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 COP00_23725 f9a4b56193197043ffff9631bbc67ca2 272 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 74 263 9.9E-26 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 COP00_23725 f9a4b56193197043ffff9631bbc67ca2 272 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 7 264 2.9E-97 T 13-10-2018 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 COP00_23725 f9a4b56193197043ffff9631bbc67ca2 272 SUPERFAMILY SSF161098 14 261 5.61E-55 T 13-10-2018 IPR035906 MetI-like superfamily COP00_23725 f9a4b56193197043ffff9631bbc67ca2 272 Gene3D G3DSA:1.10.3720.10 13 268 1.8E-67 T 13-10-2018 IPR035906 MetI-like superfamily COP00_23725 f9a4b56193197043ffff9631bbc67ca2 272 TIGRFAM TIGR02139 permease_CysT: sulfate ABC transporter, permease protein CysT 8 267 5.2E-123 T 13-10-2018 IPR011865 Sulphate ABC transporter, permease protein CysT GO:0008272|GO:0015116|GO:0016021 COP00_12125 e7a736a39d34719f45ed598d462db2e7 200 Pfam PF02397 Bacterial sugar transferase 4 178 5.1E-66 T 13-10-2018 IPR003362 Bacterial sugar transferase COP00_21370 881355d7efc3aa0fe9c28f47c485cf35 254 Hamap MF_00214 3-dehydroquinate dehydratase [aroD]. 18 250 40.553 T 13-10-2018 IPR001381 3-dehydroquinate dehydratase type I GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 COP00_21370 881355d7efc3aa0fe9c28f47c485cf35 254 TIGRFAM TIGR01093 aroD: 3-dehydroquinate dehydratase, type I 18 247 1.3E-73 T 13-10-2018 IPR001381 3-dehydroquinate dehydratase type I GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 COP00_21370 881355d7efc3aa0fe9c28f47c485cf35 254 ProSitePatterns PS01028 Dehydroquinase class I active site. 115 145 - T 13-10-2018 IPR018508 3-dehydroquinate dehydratase, active site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 COP00_21370 881355d7efc3aa0fe9c28f47c485cf35 254 Gene3D G3DSA:3.20.20.70 1 254 5.5E-97 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 COP00_21370 881355d7efc3aa0fe9c28f47c485cf35 254 Pfam PF01487 Type I 3-dehydroquinase 20 247 7.0E-74 T 13-10-2018 IPR001381 3-dehydroquinate dehydratase type I GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 COP00_21370 881355d7efc3aa0fe9c28f47c485cf35 254 SUPERFAMILY SSF51569 2 252 1.94E-81 T 13-10-2018 COP00_10760 31011a3a908c5f59cd5667ab84df603b 310 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 90 101 - T 13-10-2018 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 COP00_10760 31011a3a908c5f59cd5667ab84df603b 310 TIGRFAM TIGR00191 thrB: homoserine kinase 8 300 3.2E-92 T 13-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 COP00_10760 31011a3a908c5f59cd5667ab84df603b 310 SUPERFAMILY SSF55060 164 284 1.03E-31 T 13-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily COP00_10760 31011a3a908c5f59cd5667ab84df603b 310 PRINTS PR00958 Homoserine kinase signature 249 264 6.7E-38 T 13-10-2018 COP00_10760 31011a3a908c5f59cd5667ab84df603b 310 PRINTS PR00958 Homoserine kinase signature 97 112 6.7E-38 T 13-10-2018 COP00_10760 31011a3a908c5f59cd5667ab84df603b 310 PRINTS PR00958 Homoserine kinase signature 131 144 6.7E-38 T 13-10-2018 COP00_10760 31011a3a908c5f59cd5667ab84df603b 310 PRINTS PR00958 Homoserine kinase signature 169 186 6.7E-38 T 13-10-2018 COP00_10760 31011a3a908c5f59cd5667ab84df603b 310 PRINTS PR00958 Homoserine kinase signature 15 30 6.7E-38 T 13-10-2018 COP00_10760 31011a3a908c5f59cd5667ab84df603b 310 Hamap MF_00384 Homoserine kinase [thrB]. 10 299 28.33 T 13-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 COP00_10760 31011a3a908c5f59cd5667ab84df603b 310 PIRSF PIRSF000676 4 301 2.5E-88 T 13-10-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 COP00_10760 31011a3a908c5f59cd5667ab84df603b 310 Pfam PF08544 GHMP kinases C terminal 207 282 8.1E-9 T 13-10-2018 IPR013750 GHMP kinase, C-terminal domain COP00_10760 31011a3a908c5f59cd5667ab84df603b 310 Gene3D G3DSA:3.30.230.10 6 165 1.0E-40 T 13-10-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup COP00_10760 31011a3a908c5f59cd5667ab84df603b 310 Pfam PF00288 GHMP kinases N terminal domain 84 144 2.7E-11 T 13-10-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 COP00_10760 31011a3a908c5f59cd5667ab84df603b 310 Gene3D G3DSA:3.30.70.890 166 288 4.8E-35 T 13-10-2018 IPR036554 GHMP kinase, C-terminal domain superfamily COP00_10760 31011a3a908c5f59cd5667ab84df603b 310 SUPERFAMILY SSF54211 6 156 2.96E-29 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold COP00_15260 a0bba7afc14216191d461dc2f195394a 278 Gene3D G3DSA:3.20.20.150 1 278 6.4E-81 T 13-10-2018 COP00_15260 a0bba7afc14216191d461dc2f195394a 278 Pfam PF01261 Xylose isomerase-like TIM barrel 21 225 3.2E-32 T 13-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain COP00_15260 a0bba7afc14216191d461dc2f195394a 278 SUPERFAMILY SSF51658 6 275 1.96E-68 T 13-10-2018 IPR036237 Xylose isomerase-like superfamily COP00_06555 ffc572ddb55befe17db73ff3547070dc 266 Pfam PF08769 Sporulation initiation factor Spo0A C terminal 156 259 6.0E-45 T 13-10-2018 IPR014879 Sporulation initiation factor Spo0A, C-terminal GO:0003700|GO:0005509|GO:0005737|GO:0006355|GO:0042173 COP00_06555 ffc572ddb55befe17db73ff3547070dc 266 SUPERFAMILY SSF46894 150 264 4.08E-48 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 COP00_06555 ffc572ddb55befe17db73ff3547070dc 266 Gene3D G3DSA:3.40.50.2300 1 134 3.8E-32 T 13-10-2018 COP00_06555 ffc572ddb55befe17db73ff3547070dc 266 TIGRFAM TIGR02875 spore_0_A: sporulation transcription factor Spo0A 2 266 1.2E-129 T 13-10-2018 IPR012052 Sporulation transcription factor Spo0A GO:0003677|GO:0005509|GO:0006355|GO:0043937|GO:0051606 COP00_06555 ffc572ddb55befe17db73ff3547070dc 266 PIRSF PIRSF002937 1 266 7.2E-135 T 13-10-2018 IPR012052 Sporulation transcription factor Spo0A GO:0003677|GO:0005509|GO:0006355|GO:0043937|GO:0051606 COP00_06555 ffc572ddb55befe17db73ff3547070dc 266 Gene3D G3DSA:1.10.10.10 147 266 6.3E-55 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_06555 ffc572ddb55befe17db73ff3547070dc 266 ProDom PD010908 TRANSCRIPTION SPORULATION TWO-COMPONENT DNA-BINDING PHOSPHORYLATION SENSORY REGULATION TRANSDUCTION METAL-BINDING CALCIUM 155 265 5.0E-59 T 13-10-2018 IPR014879 Sporulation initiation factor Spo0A, C-terminal GO:0003700|GO:0005509|GO:0005737|GO:0006355|GO:0042173 COP00_06555 ffc572ddb55befe17db73ff3547070dc 266 Pfam PF00072 Response regulator receiver domain 6 119 3.1E-28 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 COP00_06555 ffc572ddb55befe17db73ff3547070dc 266 SMART SM00448 4 119 6.6E-31 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 COP00_06555 ffc572ddb55befe17db73ff3547070dc 266 SUPERFAMILY SSF52172 2 127 6.97E-32 T 13-10-2018 IPR011006 CheY-like superfamily COP00_13280 e7a7fc62ba0691b6ae81787ceaf0e400 513 Gene3D G3DSA:3.90.550.10 36 235 4.9E-44 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases COP00_13280 e7a7fc62ba0691b6ae81787ceaf0e400 513 SUPERFAMILY SSF53448 38 248 2.34E-43 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases COP00_13280 e7a7fc62ba0691b6ae81787ceaf0e400 513 Pfam PF00535 Glycosyl transferase family 2 40 171 1.0E-29 T 13-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 COP00_02055 8f3753d7d6355392e5db2ee29aec6bc8 144 Pfam PF12680 SnoaL-like domain 8 115 2.9E-14 T 13-10-2018 IPR037401 SnoaL-like domain COP00_02055 8f3753d7d6355392e5db2ee29aec6bc8 144 ProDom PD011053 BIOSYNTHESIS PHENAZINE PROBABLE PHZA PHZB ANTIBIOTIC VIRULENCE A/B EHPA PHZ1 2 130 0.003 T 13-10-2018 IPR004964 Phenazine biosynthesis protein A/B GO:0017000 COP00_02055 8f3753d7d6355392e5db2ee29aec6bc8 144 Gene3D G3DSA:3.10.450.50 2 135 2.7E-43 T 13-10-2018 COP00_02055 8f3753d7d6355392e5db2ee29aec6bc8 144 SUPERFAMILY SSF54427 1 130 3.2E-34 T 13-10-2018 IPR032710 NTF2-like domain superfamily COP00_19355 466c708f412f8329c66a11ca2b341800 615 Pfam PF01757 Acyltransferase family 12 334 7.4E-20 T 13-10-2018 IPR002656 Acyltransferase 3 GO:0016747 COP00_19355 466c708f412f8329c66a11ca2b341800 615 SUPERFAMILY SSF52266 454 614 1.05E-16 T 13-10-2018 COP00_19355 466c708f412f8329c66a11ca2b341800 615 Gene3D G3DSA:3.40.50.1110 444 615 4.1E-13 T 13-10-2018 IPR036514 SGNH hydrolase superfamily COP00_07905 a9ec1291a8012907af488401b6912ca2 460 Pfam PF00324 Amino acid permease 22 453 2.0E-112 T 13-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 COP00_07905 a9ec1291a8012907af488401b6912ca2 460 Gene3D G3DSA:1.20.1740.10 13 460 2.3E-64 T 13-10-2018 COP00_07905 a9ec1291a8012907af488401b6912ca2 460 PIRSF PIRSF006060 1 459 1.5E-72 T 13-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 COP00_07905 a9ec1291a8012907af488401b6912ca2 460 ProSitePatterns PS00218 Amino acid permeases signature. 47 77 - T 13-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 COP00_09920 80abe41fdf99295a0f007eb4598d82a9 252 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 91 117 2.6E-8 T 13-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 COP00_09920 80abe41fdf99295a0f007eb4598d82a9 252 Gene3D G3DSA:1.20.120.910 1 129 1.7E-28 T 13-10-2018 COP00_09920 80abe41fdf99295a0f007eb4598d82a9 252 SUPERFAMILY SSF57716 93 124 2.71E-6 T 13-10-2018 COP00_09920 80abe41fdf99295a0f007eb4598d82a9 252 TIGRFAM TIGR02890 bacill_yteA: regulatory protein, yteA family 7 167 3.7E-61 T 13-10-2018 IPR014240 Regulatory protein, YteA family COP00_09920 80abe41fdf99295a0f007eb4598d82a9 252 SUPERFAMILY SSF109635 4 92 1.19E-13 T 13-10-2018 IPR037187 DksA, N-terminal domain superfamily COP00_03590 9d3ab2547190f3b475c2656e67869b12 77 Pfam PF05979 Bacterial protein of unknown function (DUF896) 5 68 7.7E-32 T 13-10-2018 IPR009242 Protein of unknown function DUF896 COP00_03590 9d3ab2547190f3b475c2656e67869b12 77 Gene3D G3DSA:1.10.287.540 1 56 4.4E-26 T 13-10-2018 COP00_03590 9d3ab2547190f3b475c2656e67869b12 77 SUPERFAMILY SSF158221 1 42 7.72E-15 T 13-10-2018 COP00_03590 9d3ab2547190f3b475c2656e67869b12 77 Hamap MF_01103 UPF0291 protein . 2 60 16.758 T 13-10-2018 IPR009242 Protein of unknown function DUF896 COP00_02065 cf906e0c2ab661a0d548cd40173b2543 148 Gene3D G3DSA:3.30.300.20 7 146 1.0E-31 T 13-10-2018 IPR015946 K homology domain-like, alpha/beta COP00_02065 cf906e0c2ab661a0d548cd40173b2543 148 SUPERFAMILY SSF82784 2 144 4.19E-33 T 13-10-2018 IPR036102 OsmC/Ohr superfamily COP00_02065 cf906e0c2ab661a0d548cd40173b2543 148 TIGRFAM TIGR03563 perox_SACOL1771: peroxiredoxin, SACOL1771 subfamily 4 141 5.9E-69 T 13-10-2018 IPR019905 Peroxiredoxin OsmC-like protein, Firmicutes COP00_02065 cf906e0c2ab661a0d548cd40173b2543 148 Pfam PF02566 OsmC-like protein 39 142 3.0E-17 T 13-10-2018 IPR003718 OsmC/Ohr family COP00_04310 73f9c0eb4a7d14658ae94769437a9b9c 411 PRINTS PR01035 Tetracycline resistance protein signature 140 162 5.0E-7 T 13-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 COP00_04310 73f9c0eb4a7d14658ae94769437a9b9c 411 PRINTS PR01035 Tetracycline resistance protein signature 340 363 5.0E-7 T 13-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 COP00_04310 73f9c0eb4a7d14658ae94769437a9b9c 411 PRINTS PR01035 Tetracycline resistance protein signature 20 36 5.0E-7 T 13-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 COP00_04310 73f9c0eb4a7d14658ae94769437a9b9c 411 PRINTS PR01035 Tetracycline resistance protein signature 283 304 5.0E-7 T 13-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 COP00_04310 73f9c0eb4a7d14658ae94769437a9b9c 411 SUPERFAMILY SSF103473 9 396 5.75E-65 T 13-10-2018 IPR036259 MFS transporter superfamily COP00_04310 73f9c0eb4a7d14658ae94769437a9b9c 411 Gene3D G3DSA:1.20.1250.20 4 397 8.2E-64 T 13-10-2018 COP00_04310 73f9c0eb4a7d14658ae94769437a9b9c 411 Pfam PF07690 Major Facilitator Superfamily 19 360 1.3E-51 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 COP00_02535 5cc474d38eac8e5f2fb935c99f51e60d 240 PIRSF PIRSF029958 3 239 3.3E-61 T 13-10-2018 IPR008701 Necrosis inducing protein COP00_02535 5cc474d38eac8e5f2fb935c99f51e60d 240 Pfam PF05630 Necrosis inducing protein (NPP1) 46 237 1.2E-72 T 13-10-2018 IPR008701 Necrosis inducing protein COP00_09810 643d69b6e5fe71c5981c32e1570f72b8 75 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 5 74 1.2E-37 T 13-10-2018 IPR002696 Putative membrane protein insertion efficiency factor COP00_09810 643d69b6e5fe71c5981c32e1570f72b8 75 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 16 68 6.0E-24 T 13-10-2018 IPR002696 Putative membrane protein insertion efficiency factor COP00_09810 643d69b6e5fe71c5981c32e1570f72b8 75 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 1 69 26.272 T 13-10-2018 IPR002696 Putative membrane protein insertion efficiency factor COP00_09810 643d69b6e5fe71c5981c32e1570f72b8 75 SMART SM01234 1 68 3.5E-50 T 13-10-2018 IPR002696 Putative membrane protein insertion efficiency factor COP00_09810 643d69b6e5fe71c5981c32e1570f72b8 75 Pfam PF01809 Haemolytic domain 3 68 1.6E-32 T 13-10-2018 IPR002696 Putative membrane protein insertion efficiency factor COP00_12565 e1641d6c9042151f8ef5b5977b66b079 118 Pfam PF07972 NrdI Flavodoxin like 3 109 1.7E-30 T 13-10-2018 IPR004465 Ribonucleotide reductase Class Ib, NrdI COP00_12565 e1641d6c9042151f8ef5b5977b66b079 118 Gene3D G3DSA:3.40.50.360 1 118 6.0E-38 T 13-10-2018 IPR029039 Flavoprotein-like superfamily COP00_12565 e1641d6c9042151f8ef5b5977b66b079 118 PIRSF PIRSF005087 1 118 8.1E-37 T 13-10-2018 IPR004465 Ribonucleotide reductase Class Ib, NrdI COP00_12565 e1641d6c9042151f8ef5b5977b66b079 118 TIGRFAM TIGR00333 nrdI: nrdI protein 3 112 3.4E-30 T 13-10-2018 IPR004465 Ribonucleotide reductase Class Ib, NrdI COP00_12565 e1641d6c9042151f8ef5b5977b66b079 118 SUPERFAMILY SSF52218 1 112 3.2E-20 T 13-10-2018 IPR029039 Flavoprotein-like superfamily COP00_14620 7b468c01f98484703ccfbfc9384e38be 371 Gene3D G3DSA:1.10.230.10 225 324 4.0E-111 T 13-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain COP00_14620 7b468c01f98484703ccfbfc9384e38be 371 ProSitePatterns PS00480 Citrate synthase signature. 259 272 - T 13-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 COP00_14620 7b468c01f98484703ccfbfc9384e38be 371 Gene3D G3DSA:1.10.580.10 32 356 4.0E-111 T 13-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 COP00_14620 7b468c01f98484703ccfbfc9384e38be 371 PIRSF PIRSF001369 1 370 1.4E-129 T 13-10-2018 IPR024176 Citrate synthase, bacterial-type COP00_14620 7b468c01f98484703ccfbfc9384e38be 371 SUPERFAMILY SSF48256 7 367 8.77E-120 T 13-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 COP00_14620 7b468c01f98484703ccfbfc9384e38be 371 PRINTS PR00143 Citrate synthase signature 128 141 1.2E-33 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 COP00_14620 7b468c01f98484703ccfbfc9384e38be 371 PRINTS PR00143 Citrate synthase signature 177 192 1.2E-33 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 COP00_14620 7b468c01f98484703ccfbfc9384e38be 371 PRINTS PR00143 Citrate synthase signature 199 227 1.2E-33 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 COP00_14620 7b468c01f98484703ccfbfc9384e38be 371 PRINTS PR00143 Citrate synthase signature 330 344 1.2E-33 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 COP00_14620 7b468c01f98484703ccfbfc9384e38be 371 PRINTS PR00143 Citrate synthase signature 310 326 1.2E-33 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 COP00_14620 7b468c01f98484703ccfbfc9384e38be 371 PRINTS PR00143 Citrate synthase signature 252 272 1.2E-33 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 COP00_14620 7b468c01f98484703ccfbfc9384e38be 371 Pfam PF00285 Citrate synthase, C-terminal domain 10 360 7.4E-111 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 COP00_05195 0e6982be827c21aed07458c8774ce706 333 Pfam PF08461 Ribonuclease R winged-helix domain 260 322 1.5E-4 T 13-10-2018 IPR013668 Ribonuclease R winged-helix domain COP00_05195 0e6982be827c21aed07458c8774ce706 333 Gene3D G3DSA:3.40.50.300 12 157 3.3E-36 T 13-10-2018 COP00_05195 0e6982be827c21aed07458c8774ce706 333 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 38 51 - T 13-10-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 COP00_05195 0e6982be827c21aed07458c8774ce706 333 Gene3D G3DSA:1.10.8.60 158 230 2.8E-15 T 13-10-2018 COP00_05195 0e6982be827c21aed07458c8774ce706 333 SUPERFAMILY SSF52540 13 225 2.2E-38 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_05195 0e6982be827c21aed07458c8774ce706 333 Pfam PF14532 Sigma-54 interaction domain 25 157 2.2E-15 T 13-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 COP00_05195 0e6982be827c21aed07458c8774ce706 333 Gene3D G3DSA:1.10.10.10 248 332 1.2E-6 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_08180 a5f809faf54adb271379584a1a4e7fea 216 SMART SM00028 34 67 0.0025 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 COP00_08180 a5f809faf54adb271379584a1a4e7fea 216 SMART SM00028 1 33 12.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 COP00_08180 a5f809faf54adb271379584a1a4e7fea 216 SMART SM00028 102 135 0.2 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 COP00_08180 a5f809faf54adb271379584a1a4e7fea 216 SMART SM00028 68 101 5.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 COP00_08180 a5f809faf54adb271379584a1a4e7fea 216 SMART SM00028 136 169 16.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 COP00_08180 a5f809faf54adb271379584a1a4e7fea 216 SMART SM00028 170 203 4.1E-7 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 COP00_08180 a5f809faf54adb271379584a1a4e7fea 216 SUPERFAMILY SSF81901 3 206 9.68E-39 T 13-10-2018 COP00_08180 a5f809faf54adb271379584a1a4e7fea 216 Pfam PF14559 Tetratricopeptide repeat 10 70 1.5E-6 T 13-10-2018 COP00_08180 a5f809faf54adb271379584a1a4e7fea 216 Gene3D G3DSA:1.25.40.10 26 216 1.3E-51 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 COP00_08180 a5f809faf54adb271379584a1a4e7fea 216 Pfam PF13432 Tetratricopeptide repeat 106 159 4.1E-8 T 13-10-2018 COP00_08180 a5f809faf54adb271379584a1a4e7fea 216 Pfam PF00515 Tetratricopeptide repeat 170 203 1.9E-8 T 13-10-2018 IPR001440 Tetratricopeptide repeat 1 GO:0005515 COP00_18555 c38f652578b603485fb5f9d6101fc9e9 227 SUPERFAMILY SSF52540 3 218 9.47E-54 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_18555 c38f652578b603485fb5f9d6101fc9e9 227 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 COP00_18555 c38f652578b603485fb5f9d6101fc9e9 227 SMART SM00382 31 217 2.7E-8 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_18555 c38f652578b603485fb5f9d6101fc9e9 227 Gene3D G3DSA:3.40.50.300 1 225 1.7E-57 T 13-10-2018 COP00_18555 c38f652578b603485fb5f9d6101fc9e9 227 Pfam PF00005 ABC transporter 23 168 2.2E-29 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 COP00_03955 5a792e64a7727b7074c5a6b797d4eefd 261 Gene3D G3DSA:3.90.226.10 2 202 4.4E-62 T 13-10-2018 COP00_03955 5a792e64a7727b7074c5a6b797d4eefd 261 Pfam PF00378 Enoyl-CoA hydratase/isomerase 13 259 5.0E-53 T 13-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 COP00_03955 5a792e64a7727b7074c5a6b797d4eefd 261 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 101 121 - T 13-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 COP00_03955 5a792e64a7727b7074c5a6b797d4eefd 261 SUPERFAMILY SSF52096 2 259 6.26E-74 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily COP00_03955 5a792e64a7727b7074c5a6b797d4eefd 261 Gene3D G3DSA:1.10.12.10 206 259 1.9E-14 T 13-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal COP00_21175 bacbd9332173d885e141dac921fdd385 250 Gene3D G3DSA:3.40.50.720 1 250 7.4E-79 T 13-10-2018 COP00_21175 bacbd9332173d885e141dac921fdd385 250 SUPERFAMILY SSF51735 4 248 4.71E-78 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily COP00_21175 bacbd9332173d885e141dac921fdd385 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 5.2E-7 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_21175 bacbd9332173d885e141dac921fdd385 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 5.2E-7 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_21175 bacbd9332173d885e141dac921fdd385 250 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 5.2E-7 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_21175 bacbd9332173d885e141dac921fdd385 250 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 11 245 2.8E-65 T 13-10-2018 COP00_21175 bacbd9332173d885e141dac921fdd385 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 1.9E-31 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_21175 bacbd9332173d885e141dac921fdd385 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 1.9E-31 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_21175 bacbd9332173d885e141dac921fdd385 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 1.9E-31 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_21175 bacbd9332173d885e141dac921fdd385 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 1.9E-31 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_21175 bacbd9332173d885e141dac921fdd385 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 210 230 1.9E-31 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_21175 bacbd9332173d885e141dac921fdd385 250 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 1.9E-31 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_09440 94353b59a6262fef67395fcf349be832 213 Gene3D G3DSA:3.40.50.150 1 213 4.3E-73 T 13-10-2018 COP00_09440 94353b59a6262fef67395fcf349be832 213 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 1 212 29.709 T 13-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 COP00_09440 94353b59a6262fef67395fcf349be832 213 Pfam PF02390 Putative methyltransferase 38 206 8.6E-49 T 13-10-2018 COP00_09440 94353b59a6262fef67395fcf349be832 213 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 24 212 4.4E-64 T 13-10-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 COP00_09440 94353b59a6262fef67395fcf349be832 213 SUPERFAMILY SSF53335 24 209 1.14E-27 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase COP00_21905 3e67f231f2d7492df13f7dcee1fc6f5b 359 SUPERFAMILY SSF82689 246 343 1.19E-8 T 13-10-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 COP00_21905 3e67f231f2d7492df13f7dcee1fc6f5b 359 SUPERFAMILY SSF82861 94 177 3.27E-10 T 13-10-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 COP00_21905 3e67f231f2d7492df13f7dcee1fc6f5b 359 SUPERFAMILY SSF50182 178 244 4.25E-17 T 13-10-2018 IPR010920 LSM domain superfamily COP00_21905 3e67f231f2d7492df13f7dcee1fc6f5b 359 Pfam PF00924 Mechanosensitive ion channel 136 338 4.0E-58 T 13-10-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 COP00_21905 3e67f231f2d7492df13f7dcee1fc6f5b 359 Gene3D G3DSA:2.30.30.60 194 243 7.8E-13 T 13-10-2018 IPR023408 Mechanosensitive ion channel MscS domain superfamily COP00_21905 3e67f231f2d7492df13f7dcee1fc6f5b 359 Gene3D G3DSA:3.30.70.100 244 342 5.2E-9 T 13-10-2018 COP00_00940 c74f8033b5bc874432167447bc06fb6f 231 Pfam PF01168 Alanine racemase, N-terminal domain 6 223 2.6E-21 T 13-10-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 COP00_00940 c74f8033b5bc874432167447bc06fb6f 231 ProSitePatterns PS01211 Uncharacterized protein family UPF0001 signature. 75 89 - T 13-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 COP00_00940 c74f8033b5bc874432167447bc06fb6f 231 Hamap MF_02087 Pyridoxal phosphate homeostasis protein. 5 224 28.857 T 13-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 COP00_00940 c74f8033b5bc874432167447bc06fb6f 231 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 2 224 6.9E-51 T 13-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 COP00_00940 c74f8033b5bc874432167447bc06fb6f 231 SUPERFAMILY SSF51419 2 223 6.67E-73 T 13-10-2018 IPR029066 PLP-binding barrel COP00_00940 c74f8033b5bc874432167447bc06fb6f 231 PIRSF PIRSF004848 1 228 1.2E-66 T 13-10-2018 IPR011078 Pyridoxal phosphate homeostasis protein GO:0030170 COP00_00940 c74f8033b5bc874432167447bc06fb6f 231 Gene3D G3DSA:3.20.20.10 1 227 1.4E-78 T 13-10-2018 IPR029066 PLP-binding barrel COP00_08860 06ab95d66a58ec52e11dc3f11fa6dd0d 344 SUPERFAMILY SSF46589 14 99 3.5E-21 T 13-10-2018 IPR010978 Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm GO:0000166 COP00_08860 06ab95d66a58ec52e11dc3f11fa6dd0d 344 Pfam PF01409 tRNA synthetases class II core domain (F) 93 341 1.2E-108 T 13-10-2018 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 COP00_08860 06ab95d66a58ec52e11dc3f11fa6dd0d 344 SUPERFAMILY SSF55681 93 342 1.12E-83 T 13-10-2018 COP00_08860 06ab95d66a58ec52e11dc3f11fa6dd0d 344 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 40 342 2.3E-116 T 13-10-2018 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 COP00_08860 06ab95d66a58ec52e11dc3f11fa6dd0d 344 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 9 341 48.614 T 13-10-2018 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 COP00_08860 06ab95d66a58ec52e11dc3f11fa6dd0d 344 Gene3D G3DSA:3.30.930.10 8 344 3.1E-128 T 13-10-2018 COP00_08860 06ab95d66a58ec52e11dc3f11fa6dd0d 344 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 20 88 2.4E-25 T 13-10-2018 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 COP00_08345 0718f32ec7961a9d7d7820fbbf55675b 236 Pfam PF05908 Poly-gamma-glutamate hydrolase 39 227 1.6E-70 T 13-10-2018 IPR008585 Poly-gamma-glutamate hydrolase COP00_08345 0718f32ec7961a9d7d7820fbbf55675b 236 Gene3D G3DSA:3.40.630.100 34 236 2.5E-60 T 13-10-2018 IPR038128 Poly-gamma-glutamate hydrolase superfamily COP00_01840 7286f913a4b0518fdfff24c7bb2eeb85 64 Gene3D G3DSA:1.10.1200.20 1 63 3.5E-7 T 13-10-2018 IPR035900 Colicin E immunity protein superfamily COP00_01840 7286f913a4b0518fdfff24c7bb2eeb85 64 SUPERFAMILY SSF47345 3 58 3.79E-7 T 13-10-2018 IPR035900 Colicin E immunity protein superfamily COP00_01840 7286f913a4b0518fdfff24c7bb2eeb85 64 Pfam PF01320 Colicin immunity protein / pyocin immunity protein 2 57 1.9E-5 T 13-10-2018 IPR000290 Colicin immunity protein/pyocin immunity protein GO:0015643|GO:0030153 COP00_06785 d386277671f45613633ac72b772722b1 124 Pfam PF15980 Putative Competence protein ComGF 22 114 1.2E-20 T 13-10-2018 IPR016977 Competence operon G, ComGF COP00_22875 7dc14ed6150fb58ed3319c4ff7138196 131 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 3 114 7.7E-38 T 13-10-2018 IPR006504 Transcriptional regulator Spx/MgsR COP00_22875 7dc14ed6150fb58ed3319c4ff7138196 131 Hamap MF_01132 Regulatory protein Spx [spxA]. 1 131 39.7 T 13-10-2018 IPR023731 Regulatory protein Spx GO:0045892 COP00_22875 7dc14ed6150fb58ed3319c4ff7138196 131 Pfam PF03960 ArsC family 5 113 4.4E-24 T 13-10-2018 IPR006660 Arsenate reductase-like COP00_22875 7dc14ed6150fb58ed3319c4ff7138196 131 Gene3D G3DSA:3.40.30.10 1 131 8.0E-49 T 13-10-2018 COP00_22875 7dc14ed6150fb58ed3319c4ff7138196 131 SUPERFAMILY SSF52833 1 128 5.3E-41 T 13-10-2018 IPR036249 Thioredoxin-like superfamily COP00_03785 178599eead67ea6d3445edd84a24ed48 367 SUPERFAMILY SSF102114 6 340 3.27E-63 T 13-10-2018 COP00_03785 178599eead67ea6d3445edd84a24ed48 367 Pfam PF04055 Radical SAM superfamily 17 174 5.5E-18 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 COP00_03785 178599eead67ea6d3445edd84a24ed48 367 TIGRFAM TIGR04053 sam_11: radical SAM protein, BA_1875 family 5 363 2.4E-155 T 13-10-2018 IPR027634 Radical SAM protein, BA_1875 family COP00_03785 178599eead67ea6d3445edd84a24ed48 367 Pfam PF13394 4Fe-4S single cluster domain 19 102 3.7E-5 T 13-10-2018 COP00_03785 178599eead67ea6d3445edd84a24ed48 367 Gene3D G3DSA:3.20.20.70 5 319 5.4E-45 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 COP00_03785 178599eead67ea6d3445edd84a24ed48 367 PIRSF PIRSF037420 3 367 1.8E-95 T 13-10-2018 IPR017200 Coenzyme PQQ synthesis protein E COP00_03785 178599eead67ea6d3445edd84a24ed48 367 SMART SM00729 11 210 0.0017 T 13-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 COP00_24090 a4a4613e18289b38c93a0938c7cd7900 664 SUPERFAMILY SSF56519 149 333 2.09E-37 T 13-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 COP00_24090 a4a4613e18289b38c93a0938c7cd7900 664 SUPERFAMILY SSF54427 29 146 8.24E-30 T 13-10-2018 IPR032710 NTF2-like domain superfamily COP00_24090 a4a4613e18289b38c93a0938c7cd7900 664 Gene3D G3DSA:3.30.1390.30 176 249 1.9E-46 T 13-10-2018 COP00_24090 a4a4613e18289b38c93a0938c7cd7900 664 Pfam PF05223 NTF2-like N-terminal transpeptidase domain 27 147 2.5E-26 T 13-10-2018 IPR007887 NTF2-like N-terminal transpeptidase GO:0046677 COP00_24090 a4a4613e18289b38c93a0938c7cd7900 664 Pfam PF03717 Penicillin-binding Protein dimerisation domain 155 310 2.0E-35 T 13-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 COP00_24090 a4a4613e18289b38c93a0938c7cd7900 664 Gene3D G3DSA:3.90.1310.10 156 329 1.9E-46 T 13-10-2018 COP00_24090 a4a4613e18289b38c93a0938c7cd7900 664 Gene3D G3DSA:3.10.450.100 25 142 1.3E-22 T 13-10-2018 COP00_24090 a4a4613e18289b38c93a0938c7cd7900 664 Pfam PF00905 Penicillin binding protein transpeptidase domain 351 662 1.2E-68 T 13-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 COP00_24090 a4a4613e18289b38c93a0938c7cd7900 664 SUPERFAMILY SSF56601 334 663 1.71E-76 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like COP00_24090 a4a4613e18289b38c93a0938c7cd7900 664 Gene3D G3DSA:3.40.710.10 333 664 4.6E-86 T 13-10-2018 COP00_04395 2850c98a8ddb7d0f167da2febecc6acf 322 Pfam PF00669 Bacterial flagellin N-terminal helical region 3 150 2.7E-39 T 13-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 COP00_04395 2850c98a8ddb7d0f167da2febecc6acf 322 Pfam PF00700 Bacterial flagellin C-terminal helical region 237 321 6.0E-32 T 13-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 COP00_04395 2850c98a8ddb7d0f167da2febecc6acf 322 PRINTS PR00207 Flagellin signature 35 52 1.7E-19 T 13-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 COP00_04395 2850c98a8ddb7d0f167da2febecc6acf 322 PRINTS PR00207 Flagellin signature 74 93 1.7E-19 T 13-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 COP00_04395 2850c98a8ddb7d0f167da2febecc6acf 322 PRINTS PR00207 Flagellin signature 110 133 1.7E-19 T 13-10-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 COP00_04395 2850c98a8ddb7d0f167da2febecc6acf 322 Gene3D G3DSA:1.10.8.410 273 322 3.4E-29 T 13-10-2018 COP00_04395 2850c98a8ddb7d0f167da2febecc6acf 322 SUPERFAMILY SSF64518 1 322 2.09E-91 T 13-10-2018 COP00_04395 2850c98a8ddb7d0f167da2febecc6acf 322 Gene3D G3DSA:1.20.1330.10 48 272 4.7E-55 T 13-10-2018 COP00_04115 32c311a31d61e799551d30b24d038e6b 207 Gene3D G3DSA:1.10.357.10 6 192 9.2E-47 T 13-10-2018 COP00_04115 32c311a31d61e799551d30b24d038e6b 207 SUPERFAMILY SSF46689 8 76 1.9E-15 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 COP00_04115 32c311a31d61e799551d30b24d038e6b 207 Pfam PF14278 Transcriptional regulator C-terminal region 90 169 8.6E-16 T 13-10-2018 IPR039532 Transcriptional regulator TetR, C-terminal, Firmicutes type COP00_04115 32c311a31d61e799551d30b24d038e6b 207 Pfam PF00440 Bacterial regulatory proteins, tetR family 20 60 1.9E-8 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 COP00_06275 9485b78616972960a9ee0520295e28ef 420 Gene3D G3DSA:1.10.150.20 192 244 1.1E-17 T 13-10-2018 COP00_06275 9485b78616972960a9ee0520295e28ef 420 Gene3D G3DSA:2.30.40.20 29 82 2.2E-28 T 13-10-2018 COP00_06275 9485b78616972960a9ee0520295e28ef 420 Gene3D G3DSA:3.30.1490.100 259 364 2.8E-15 T 13-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 COP00_06275 9485b78616972960a9ee0520295e28ef 420 SUPERFAMILY SSF100879 259 358 1.65E-14 T 13-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 COP00_06275 9485b78616972960a9ee0520295e28ef 420 Pfam PF11799 impB/mucB/samB family C-terminal domain 259 362 4.7E-17 T 13-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 COP00_06275 9485b78616972960a9ee0520295e28ef 420 Pfam PF11798 IMS family HHH motif 182 212 1.5E-9 T 13-10-2018 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 COP00_06275 9485b78616972960a9ee0520295e28ef 420 Pfam PF00817 impB/mucB/samB family 14 163 6.9E-26 T 13-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 COP00_06275 9485b78616972960a9ee0520295e28ef 420 Gene3D G3DSA:3.30.70.270 11 167 2.2E-28 T 13-10-2018 COP00_06275 9485b78616972960a9ee0520295e28ef 420 SUPERFAMILY SSF56672 9 248 6.58E-53 T 13-10-2018 COP00_07340 4031664ce80bd028236ee6ae7cb1f633 107 ProDom PD072942 YQXA ORF79 1 107 3.0E-43 T 13-10-2018 IPR020534 Uncharacterised protein family YqxA COP00_07340 4031664ce80bd028236ee6ae7cb1f633 107 Pfam PF12438 Protein of unknown function (DUF3679) 7 60 1.4E-24 T 13-10-2018 IPR020534 Uncharacterised protein family YqxA COP00_09325 2c17f71042f16515f9be340585cf16e6 421 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 2 420 4.8E-147 T 13-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 COP00_09325 2c17f71042f16515f9be340585cf16e6 421 SUPERFAMILY SSF52374 2 324 1.74E-107 T 13-10-2018 COP00_09325 2c17f71042f16515f9be340585cf16e6 421 Pfam PF01479 S4 domain 355 401 2.0E-11 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 COP00_09325 2c17f71042f16515f9be340585cf16e6 421 SMART SM00363 355 416 1.1E-10 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 COP00_09325 2c17f71042f16515f9be340585cf16e6 421 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 40 50 - T 13-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 COP00_09325 2c17f71042f16515f9be340585cf16e6 421 Gene3D G3DSA:1.10.240.10 224 326 8.0E-41 T 13-10-2018 COP00_09325 2c17f71042f16515f9be340585cf16e6 421 Gene3D G3DSA:3.40.50.620 1 223 1.2E-89 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold COP00_09325 2c17f71042f16515f9be340585cf16e6 421 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 162 177 9.4E-32 T 13-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 COP00_09325 2c17f71042f16515f9be340585cf16e6 421 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 217 229 9.4E-32 T 13-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 COP00_09325 2c17f71042f16515f9be340585cf16e6 421 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 183 205 9.4E-32 T 13-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 COP00_09325 2c17f71042f16515f9be340585cf16e6 421 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 44 66 9.4E-32 T 13-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 COP00_09325 2c17f71042f16515f9be340585cf16e6 421 Gene3D G3DSA:3.10.290.10 327 421 2.0E-33 T 13-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 COP00_09325 2c17f71042f16515f9be340585cf16e6 421 Hamap MF_02006 Tyrosine--tRNA ligase [tyrS]. 2 420 46.343 T 13-10-2018 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 GO:0004831 KEGG: 00970+6.1.1.1 COP00_09325 2c17f71042f16515f9be340585cf16e6 421 SUPERFAMILY SSF55174 322 420 5.76E-25 T 13-10-2018 COP00_09325 2c17f71042f16515f9be340585cf16e6 421 Pfam PF00579 tRNA synthetases class I (W and Y) 29 324 4.1E-90 T 13-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 COP00_11930 17638391ce2f74cc5312ccaf409b6311 305 Gene3D G3DSA:3.40.190.10 37 299 3.5E-97 T 13-10-2018 COP00_11930 17638391ce2f74cc5312ccaf409b6311 305 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 34 300 2.6E-61 T 13-10-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0022857|GO:0043190|GO:0055085 COP00_11930 17638391ce2f74cc5312ccaf409b6311 305 SUPERFAMILY SSF53850 34 303 3.53E-66 T 13-10-2018 COP00_11930 17638391ce2f74cc5312ccaf409b6311 305 Gene3D G3DSA:3.40.190.120 139 243 3.5E-97 T 13-10-2018 COP00_10650 1483962971d834397b78c4bb59c81032 224 SUPERFAMILY SSF50685 130 171 1.15E-8 T 13-10-2018 IPR036908 RlpA-like domain superfamily COP00_10650 1483962971d834397b78c4bb59c81032 224 Pfam PF06725 3D domain 130 191 1.5E-20 T 13-10-2018 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 COP00_17645 dfd6b8d3e6d85cea6f8aa5770ee44bb1 131 Pfam PF10990 Protein of unknown function (DUF2809) 31 114 6.9E-29 T 13-10-2018 IPR021257 Protein of unknown function DUF2809 COP00_11855 340bedb9ca83c8cdf406c6c8a5327ead 67 Pfam PF01381 Helix-turn-helix 9 57 5.0E-10 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 COP00_11855 340bedb9ca83c8cdf406c6c8a5327ead 67 SMART SM00530 4 59 5.0E-6 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 COP00_11855 340bedb9ca83c8cdf406c6c8a5327ead 67 Gene3D G3DSA:1.10.260.40 3 67 4.2E-14 T 13-10-2018 COP00_11855 340bedb9ca83c8cdf406c6c8a5327ead 67 SUPERFAMILY SSF47413 4 61 3.66E-12 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 COP00_12175 4b963e9e27079007713b3447591a89e1 230 Gene3D G3DSA:3.40.50.300 2 230 1.3E-72 T 13-10-2018 COP00_12175 4b963e9e27079007713b3447591a89e1 230 Pfam PF13614 AAA domain 59 178 5.1E-13 T 13-10-2018 IPR025669 AAA domain COP00_12175 4b963e9e27079007713b3447591a89e1 230 SUPERFAMILY SSF52540 49 221 3.91E-38 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_12175 4b963e9e27079007713b3447591a89e1 230 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 30 228 3.3E-61 T 13-10-2018 IPR005702 Exopolysaccharide synthesis protein GO:0045226 COP00_07020 68ad8d26e724e5cf602b539a2dcfaa57 267 ProSitePatterns PS00211 ABC transporters family signature. 164 178 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 COP00_07020 68ad8d26e724e5cf602b539a2dcfaa57 267 SMART SM00382 45 239 6.9E-11 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_07020 68ad8d26e724e5cf602b539a2dcfaa57 267 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 21 267 1.4E-122 T 13-10-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 COP00_07020 68ad8d26e724e5cf602b539a2dcfaa57 267 SUPERFAMILY SSF52540 13 254 1.05E-58 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_07020 68ad8d26e724e5cf602b539a2dcfaa57 267 Gene3D G3DSA:3.40.50.300 18 265 3.3E-62 T 13-10-2018 COP00_07020 68ad8d26e724e5cf602b539a2dcfaa57 267 Pfam PF00005 ABC transporter 37 191 1.5E-31 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 COP00_05175 a0f114ed2b9fed999cfc784dc40a5dbe 232 Gene3D G3DSA:3.40.30.10 60 230 8.4E-58 T 13-10-2018 COP00_05175 a0f114ed2b9fed999cfc784dc40a5dbe 232 SUPERFAMILY SSF52833 69 229 1.12E-43 T 13-10-2018 IPR036249 Thioredoxin-like superfamily COP00_05175 a0f114ed2b9fed999cfc784dc40a5dbe 232 Pfam PF02630 SCO1/SenC 50 212 1.3E-52 T 13-10-2018 IPR003782 Copper chaperone SCO1/SenC Reactome: R-HSA-5628897|Reactome: R-HSA-611105 COP00_14440 7258e741e63f1dccab7c64e9318aee96 488 Gene3D G3DSA:1.20.1730.10 21 486 1.7E-103 T 13-10-2018 IPR038377 Sodium/glucose symporter superfamily COP00_14440 7258e741e63f1dccab7c64e9318aee96 488 TIGRFAM TIGR02121 Na_Pro_sym: sodium/proline symporter 5 485 6.2E-222 T 13-10-2018 IPR011851 Sodium/proline symporter GO:0005298|GO:0006814|GO:0015824|GO:0016021|GO:0031402 COP00_14440 7258e741e63f1dccab7c64e9318aee96 488 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 33 431 1.2E-99 T 13-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 COP00_14440 7258e741e63f1dccab7c64e9318aee96 488 Pfam PF00474 Sodium:solute symporter family 33 431 1.2E-111 T 13-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 COP00_05730 6af0f1c2ff77e475c9a954768887c959 346 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 2 324 39.069 T 13-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 COP00_05730 6af0f1c2ff77e475c9a954768887c959 346 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 240 257 5.1E-47 T 13-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 COP00_05730 6af0f1c2ff77e475c9a954768887c959 346 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 134 154 5.1E-47 T 13-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 COP00_05730 6af0f1c2ff77e475c9a954768887c959 346 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 6 23 5.1E-47 T 13-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 COP00_05730 6af0f1c2ff77e475c9a954768887c959 346 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 56 83 5.1E-47 T 13-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 COP00_05730 6af0f1c2ff77e475c9a954768887c959 346 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 175 199 5.1E-47 T 13-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 COP00_05730 6af0f1c2ff77e475c9a954768887c959 346 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 200 224 5.1E-47 T 13-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 COP00_05730 6af0f1c2ff77e475c9a954768887c959 346 Gene3D G3DSA:3.40.50.720 1 189 1.1E-64 T 13-10-2018 COP00_05730 6af0f1c2ff77e475c9a954768887c959 346 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 182 322 1.9E-56 T 13-10-2018 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 COP00_05730 6af0f1c2ff77e475c9a954768887c959 346 Gene3D G3DSA:1.10.1040.10 191 338 2.5E-55 T 13-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 COP00_05730 6af0f1c2ff77e475c9a954768887c959 346 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 190 211 - T 13-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 COP00_05730 6af0f1c2ff77e475c9a954768887c959 346 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 3 158 1.4E-55 T 13-10-2018 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 COP00_05730 6af0f1c2ff77e475c9a954768887c959 346 SUPERFAMILY SSF51735 3 180 4.23E-57 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily COP00_05730 6af0f1c2ff77e475c9a954768887c959 346 SUPERFAMILY SSF48179 182 333 2.72E-59 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 COP00_05730 6af0f1c2ff77e475c9a954768887c959 346 PIRSF PIRSF000114 1 334 1.4E-112 T 13-10-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7902|Reactome: R-HSA-1483166 COP00_21185 a92974adb23d5428b57ba927499e556d 81 Pfam PF14182 YgaB-like protein 3 78 3.4E-32 T 13-10-2018 IPR025572 YgaB-like protein COP00_18180 c18dd69ac7b39a46089ee601b4fc1169 286 SUPERFAMILY SSF53850 7 268 5.79E-59 T 13-10-2018 COP00_18180 c18dd69ac7b39a46089ee601b4fc1169 286 Gene3D G3DSA:3.40.190.10 130 232 3.6E-76 T 13-10-2018 COP00_18180 c18dd69ac7b39a46089ee601b4fc1169 286 SMART SM00062 43 269 5.6E-61 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF COP00_18180 c18dd69ac7b39a46089ee601b4fc1169 286 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 44 267 3.3E-54 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF COP00_18180 c18dd69ac7b39a46089ee601b4fc1169 286 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 69 82 - T 13-10-2018 IPR018313 Solute-binding protein family 3, conserved site COP00_18180 c18dd69ac7b39a46089ee601b4fc1169 286 Gene3D G3DSA:3.40.190.10 42 264 3.6E-76 T 13-10-2018 COP00_00580 cefc1ef2a4e18120fe801f3ddc682389 490 SUPERFAMILY SSF53383 6 384 9.38E-96 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase COP00_00580 cefc1ef2a4e18120fe801f3ddc682389 490 Gene3D G3DSA:3.40.640.10 6 283 1.7E-95 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 COP00_00580 cefc1ef2a4e18120fe801f3ddc682389 490 Gene3D G3DSA:3.90.105.10 420 477 7.7E-20 T 13-10-2018 COP00_00580 cefc1ef2a4e18120fe801f3ddc682389 490 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 221 235 - T 13-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 COP00_00580 cefc1ef2a4e18120fe801f3ddc682389 490 Gene3D G3DSA:3.90.1150.10 314 404 2.0E-5 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 COP00_00580 cefc1ef2a4e18120fe801f3ddc682389 490 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 6 369 1.1E-117 T 13-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 COP00_00580 cefc1ef2a4e18120fe801f3ddc682389 490 SUPERFAMILY SSF55904 341 487 1.7E-41 T 13-10-2018 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily GO:0003824 COP00_00580 cefc1ef2a4e18120fe801f3ddc682389 490 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 390 459 4.3E-12 T 13-10-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 COP00_21930 0c7599971282511773f678c24aff494d 283 TIGRFAM TIGR01121 D_amino_aminoT: D-amino-acid transaminase 2 275 4.9E-136 T 13-10-2018 IPR005784 D-amino acid aminotransferase GO:0008483|GO:0030170|GO:0046416 KEGG: 00310+2.6.1.21|KEGG: 00330+2.6.1.21|KEGG: 00360+2.6.1.21|KEGG: 00472+2.6.1.21|KEGG: 00473+2.6.1.21 COP00_21930 0c7599971282511773f678c24aff494d 283 Pfam PF01063 Amino-transferase class IV 29 249 8.2E-52 T 13-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 COP00_21930 0c7599971282511773f678c24aff494d 283 ProSitePatterns PS00770 Aminotransferases class-IV signature. 176 205 - T 13-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 COP00_21930 0c7599971282511773f678c24aff494d 283 Gene3D G3DSA:3.30.470.10 1 117 1.7E-36 T 13-10-2018 COP00_21930 0c7599971282511773f678c24aff494d 283 Gene3D G3DSA:3.20.10.10 119 278 3.8E-56 T 13-10-2018 COP00_21930 0c7599971282511773f678c24aff494d 283 SUPERFAMILY SSF56752 2 275 1.7E-81 T 13-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 COP00_18150 ab1062a9e26a6db4eaa0e44fad6ca5f9 318 Pfam PF05448 Acetyl xylan esterase (AXE1) 5 315 1.2E-128 T 13-10-2018 IPR008391 Acetyl xylan esterase COP00_18150 ab1062a9e26a6db4eaa0e44fad6ca5f9 318 SUPERFAMILY SSF53474 19 318 7.6E-41 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold COP00_18150 ab1062a9e26a6db4eaa0e44fad6ca5f9 318 Gene3D G3DSA:3.40.50.1820 3 318 1.1E-95 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold COP00_07485 5e996db23b94b3f04cb5313f74c3b992 347 Pfam PF03060 Nitronate monooxygenase 3 343 3.8E-127 T 13-10-2018 IPR004136 Nitronate monooxygenase GO:0018580|GO:0055114 KEGG: 00910+1.13.12.16|MetaCyc: PWY-723 COP00_07485 5e996db23b94b3f04cb5313f74c3b992 347 SUPERFAMILY SSF51412 3 338 3.97E-61 T 13-10-2018 COP00_07485 5e996db23b94b3f04cb5313f74c3b992 347 Gene3D G3DSA:3.20.20.70 1 346 9.0E-109 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 COP00_07350 b0f33de1ba77a41e40526d0eb7716df3 368 ProDom PD041835 PROTEASE GERMINATION HYDROLASE SPORE GPR ENDOPEPTIDASE PROTEINASE ZYMOGEN PRECURSOR PEPTIDASE 10 368 0.0 T 13-10-2018 IPR005080 Peptidase A25, germination protease GO:0006508|GO:0008233|GO:0009847 COP00_07350 b0f33de1ba77a41e40526d0eb7716df3 368 Pfam PF03418 Germination protease 18 367 4.2E-192 T 13-10-2018 IPR005080 Peptidase A25, germination protease GO:0006508|GO:0008233|GO:0009847 COP00_07350 b0f33de1ba77a41e40526d0eb7716df3 368 TIGRFAM TIGR01441 GPR: GPR endopeptidase 11 368 5.8E-192 T 13-10-2018 IPR005080 Peptidase A25, germination protease GO:0006508|GO:0008233|GO:0009847 COP00_07350 b0f33de1ba77a41e40526d0eb7716df3 368 Hamap MF_00626 Germination protease [gpr]. 1 368 160.672 T 13-10-2018 IPR005080 Peptidase A25, germination protease GO:0006508|GO:0008233|GO:0009847 COP00_07350 b0f33de1ba77a41e40526d0eb7716df3 368 PIRSF PIRSF019549 4 368 1.1E-187 T 13-10-2018 IPR005080 Peptidase A25, germination protease GO:0006508|GO:0008233|GO:0009847 COP00_07350 b0f33de1ba77a41e40526d0eb7716df3 368 SUPERFAMILY SSF53163 5 368 3.27E-129 T 13-10-2018 IPR023430 Peptidase HybD-like domain superfamily COP00_09370 95c44b3f2e8aa5f0b60a1cf5a5b85f99 128 SUPERFAMILY SSF57997 14 122 1.77E-8 T 13-10-2018 COP00_09370 95c44b3f2e8aa5f0b60a1cf5a5b85f99 128 Gene3D G3DSA:3.90.20.10 5 126 5.1E-14 T 13-10-2018 COP00_16025 60ea169892d216ec197037bfc64b4d7f 376 SUPERFAMILY SSF110738 1 375 2.09E-140 T 13-10-2018 IPR036129 Glycerate kinase superfamily GO:0008887|GO:0031388 COP00_16025 60ea169892d216ec197037bfc64b4d7f 376 Gene3D G3DSA:3.90.1510.10 42 276 1.7E-143 T 13-10-2018 IPR018193 Glycerate kinase, flavodoxin-like fold GO:0008887|GO:0031388 COP00_16025 60ea169892d216ec197037bfc64b4d7f 376 TIGRFAM TIGR00045 TIGR00045: glycerate kinase 2 375 5.6E-161 T 13-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 COP00_16025 60ea169892d216ec197037bfc64b4d7f 376 Gene3D G3DSA:3.40.50.10350 1 362 1.7E-143 T 13-10-2018 IPR018197 Glycerate kinase, restriction-enzyme-like fold COP00_16025 60ea169892d216ec197037bfc64b4d7f 376 PIRSF PIRSF006078 1 376 2.0E-140 T 13-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 COP00_16025 60ea169892d216ec197037bfc64b4d7f 376 Pfam PF02595 Glycerate kinase family 3 373 3.1E-151 T 13-10-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 COP00_10510 71d8f2d4373fb23d237b5e8c52d49e24 46 ProDom PD014716 DEGQ ENZYME DEGRADATION SACQ REGULATORY REGULATION FACTOR 1 42 5.0E-16 T 13-10-2018 IPR012554 Degradation enzyme regulation protein DegQ GO:1900192 COP00_10510 71d8f2d4373fb23d237b5e8c52d49e24 46 Pfam PF08181 DegQ (SacQ) family 2 46 5.4E-31 T 13-10-2018 IPR012554 Degradation enzyme regulation protein DegQ GO:1900192 COP00_24345 4c8f04f80d87408ec0175a88243a20e6 172 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 10 23 7.1E-7 T 13-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 COP00_24345 4c8f04f80d87408ec0175a88243a20e6 172 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 115 134 7.1E-7 T 13-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 COP00_24345 4c8f04f80d87408ec0175a88243a20e6 172 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 121 158 - T 13-10-2018 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 COP00_24345 4c8f04f80d87408ec0175a88243a20e6 172 SUPERFAMILY SSF53098 8 164 1.33E-19 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily COP00_24345 4c8f04f80d87408ec0175a88243a20e6 172 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 9 160 1.5E-14 T 13-10-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 COP00_24345 4c8f04f80d87408ec0175a88243a20e6 172 Gene3D G3DSA:3.30.420.10 7 171 3.9E-37 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 COP00_11580 9cc623a86ae93417d161ef1756843f49 515 SUPERFAMILY SSF49785 377 511 1.0E-30 T 13-10-2018 IPR008979 Galactose-binding-like domain superfamily COP00_11580 9cc623a86ae93417d161ef1756843f49 515 SMART SM00606 376 511 3.8E-58 T 13-10-2018 IPR006584 Cellulose binding, type IV GO:0030246 COP00_11580 9cc623a86ae93417d161ef1756843f49 515 Pfam PF03422 Carbohydrate binding module (family 6) 384 511 4.4E-40 T 13-10-2018 IPR005084 Carbohydrate binding module family 6 GO:0030246 COP00_11580 9cc623a86ae93417d161ef1756843f49 515 Pfam PF04616 Glycosyl hydrolases family 43 45 360 7.0E-32 T 13-10-2018 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 COP00_11580 9cc623a86ae93417d161ef1756843f49 515 Gene3D G3DSA:2.115.10.20 31 373 2.5E-119 T 13-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily COP00_11580 9cc623a86ae93417d161ef1756843f49 515 SUPERFAMILY SSF75005 38 383 3.85E-55 T 13-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily COP00_11580 9cc623a86ae93417d161ef1756843f49 515 Gene3D G3DSA:2.60.120.260 374 512 1.3E-49 T 13-10-2018 IPR008979 Galactose-binding-like domain superfamily COP00_14425 cec4ebd659dba9f14d212f07b50e701b 142 ProDom PD085159 YWQH COILED COIL 1 140 2.0E-60 T 13-10-2018 IPR020326 Uncharacterised protein family YwqH COP00_14425 cec4ebd659dba9f14d212f07b50e701b 142 Pfam PF16888 Domain of unknown function (DUF5082) 11 102 2.1E-9 T 13-10-2018 IPR031681 Protein of unknown function DUF5082 COP00_19800 996cfd7da71a9ee78509cb3f0ae8708c 373 Gene3D G3DSA:1.25.40.10 1 149 2.4E-46 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 COP00_19800 996cfd7da71a9ee78509cb3f0ae8708c 373 Gene3D G3DSA:1.25.40.10 150 373 1.3E-58 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 COP00_19800 996cfd7da71a9ee78509cb3f0ae8708c 373 SMART SM00028 96 129 160.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 COP00_19800 996cfd7da71a9ee78509cb3f0ae8708c 373 SMART SM00028 218 251 0.1 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 COP00_19800 996cfd7da71a9ee78509cb3f0ae8708c 373 SMART SM00028 257 290 87.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 COP00_19800 996cfd7da71a9ee78509cb3f0ae8708c 373 SUPERFAMILY SSF48452 115 300 8.47E-11 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 COP00_19800 996cfd7da71a9ee78509cb3f0ae8708c 373 Pfam PF13424 Tetratricopeptide repeat 195 250 2.2E-7 T 13-10-2018 COP00_15270 b34ec01e287805b214e5c628a01e6662 344 SUPERFAMILY SSF55347 132 284 9.94E-17 T 13-10-2018 COP00_15270 b34ec01e287805b214e5c628a01e6662 344 Gene3D G3DSA:3.40.50.720 5 320 3.4E-120 T 13-10-2018 COP00_15270 b34ec01e287805b214e5c628a01e6662 344 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 137 239 9.0E-14 T 13-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 COP00_15270 b34ec01e287805b214e5c628a01e6662 344 SUPERFAMILY SSF51735 3 154 9.87E-42 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily COP00_15270 b34ec01e287805b214e5c628a01e6662 344 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 3 125 7.3E-28 T 13-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 COP00_15270 b34ec01e287805b214e5c628a01e6662 344 Gene3D G3DSA:3.30.360.10 144 266 3.4E-120 T 13-10-2018 COP00_15270 b34ec01e287805b214e5c628a01e6662 344 Hamap MF_01671 Inositol 2-dehydrogenase/D-chiro-inositol 3-dehydrogenase [iolG]. 1 337 51.348 T 13-10-2018 IPR023794 Inositol 2-dehydrogenase/D-chiro-inositol 3-dehydrogenase GO:0019310|GO:0050112|GO:0055114 KEGG: 00521+1.1.1.18|KEGG: 00562+1.1.1.18|MetaCyc: PWY-5940|MetaCyc: PWY-7237|MetaCyc: PWY-7241 COP00_17360 61588c5561f9f77141bf075909aafd0c 434 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 1 54 1.6E-7 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 COP00_17360 61588c5561f9f77141bf075909aafd0c 434 SUPERFAMILY SSF53335 100 430 1.17E-91 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase COP00_17360 61588c5561f9f77141bf075909aafd0c 434 Gene3D G3DSA:3.90.120.10 250 417 1.1E-88 T 13-10-2018 COP00_17360 61588c5561f9f77141bf075909aafd0c 434 Pfam PF00145 C-5 cytosine-specific DNA methylase 99 427 1.1E-82 T 13-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 COP00_17360 61588c5561f9f77141bf075909aafd0c 434 ProSitePatterns PS00095 C-5 cytosine-specific DNA methylases C-terminal signature. 408 426 - T 13-10-2018 IPR031303 DNA methylase, C-5 cytosine-specific, conserved site KEGG: 00270+2.1.1.37 COP00_17360 61588c5561f9f77141bf075909aafd0c 434 ProSitePatterns PS00094 C-5 cytosine-specific DNA methylases active site. 170 182 - T 13-10-2018 IPR018117 DNA methylase, C-5 cytosine-specific, active site KEGG: 00270+2.1.1.37|Reactome: R-HSA-212300|Reactome: R-HSA-4655427|Reactome: R-HSA-5334118 COP00_17360 61588c5561f9f77141bf075909aafd0c 434 Gene3D G3DSA:3.40.50.150 102 423 1.1E-88 T 13-10-2018 COP00_17360 61588c5561f9f77141bf075909aafd0c 434 Gene3D G3DSA:1.10.260.40 1 75 2.6E-8 T 13-10-2018 COP00_17360 61588c5561f9f77141bf075909aafd0c 434 TIGRFAM TIGR00675 dcm: DNA (cytosine-5-)-methyltransferase 101 425 1.3E-81 T 13-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 COP00_17360 61588c5561f9f77141bf075909aafd0c 434 SUPERFAMILY SSF47413 8 56 1.61E-7 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 COP00_17360 61588c5561f9f77141bf075909aafd0c 434 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 255 268 2.0E-15 T 13-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 COP00_17360 61588c5561f9f77141bf075909aafd0c 434 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 100 116 2.0E-15 T 13-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 COP00_17360 61588c5561f9f77141bf075909aafd0c 434 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 209 223 2.0E-15 T 13-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 COP00_22255 2f8775fdf39be19343505a4e0faa907e 244 Gene3D G3DSA:3.60.15.10 1 244 4.8E-83 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like COP00_22255 2f8775fdf39be19343505a4e0faa907e 244 Pfam PF12706 Beta-lactamase superfamily domain 31 211 6.1E-18 T 13-10-2018 IPR001279 Metallo-beta-lactamase COP00_22255 2f8775fdf39be19343505a4e0faa907e 244 SMART SM00849 18 211 6.6E-9 T 13-10-2018 IPR001279 Metallo-beta-lactamase COP00_22255 2f8775fdf39be19343505a4e0faa907e 244 SUPERFAMILY SSF56281 1 241 1.72E-51 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like COP00_11250 2ed600cb763dcff04ff7858b24fbb898 436 Pfam PF00295 Glycosyl hydrolases family 28 182 417 2.0E-33 T 13-10-2018 IPR000743 Glycoside hydrolase, family 28 GO:0004650|GO:0005975 COP00_11250 2ed600cb763dcff04ff7858b24fbb898 436 SUPERFAMILY SSF51126 16 411 2.51E-95 T 13-10-2018 IPR011050 Pectin lyase fold/virulence factor COP00_11250 2ed600cb763dcff04ff7858b24fbb898 436 SMART SM00710 239 260 0.72 T 13-10-2018 IPR006626 Parallel beta-helix repeat COP00_11250 2ed600cb763dcff04ff7858b24fbb898 436 SMART SM00710 214 238 2200.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat COP00_11250 2ed600cb763dcff04ff7858b24fbb898 436 SMART SM00710 326 355 6400.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat COP00_11250 2ed600cb763dcff04ff7858b24fbb898 436 SMART SM00710 367 388 3100.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat COP00_11250 2ed600cb763dcff04ff7858b24fbb898 436 SMART SM00710 394 428 10000.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat COP00_11250 2ed600cb763dcff04ff7858b24fbb898 436 SMART SM00710 273 294 1.9 T 13-10-2018 IPR006626 Parallel beta-helix repeat COP00_11250 2ed600cb763dcff04ff7858b24fbb898 436 ProSitePatterns PS00502 Polygalacturonase active site. 280 294 - T 13-10-2018 IPR000743 Glycoside hydrolase, family 28 GO:0004650|GO:0005975 COP00_11250 2ed600cb763dcff04ff7858b24fbb898 436 Pfam PF12708 Pectate lyase superfamily protein 24 78 7.8E-9 T 13-10-2018 IPR024535 Pectate lyase superfamily protein COP00_11250 2ed600cb763dcff04ff7858b24fbb898 436 Gene3D G3DSA:2.160.20.10 2 435 1.1E-145 T 13-10-2018 IPR012334 Pectin lyase fold COP00_05500 29bed6cacf52017c5e583ba9d5fde285 161 SUPERFAMILY SSF54403 36 96 1.19E-16 T 13-10-2018 COP00_05500 29bed6cacf52017c5e583ba9d5fde285 161 Gene3D G3DSA:3.10.450.40 27 98 1.6E-27 T 13-10-2018 COP00_05500 29bed6cacf52017c5e583ba9d5fde285 161 SUPERFAMILY SSF54403 99 160 1.04E-12 T 13-10-2018 COP00_05500 29bed6cacf52017c5e583ba9d5fde285 161 Gene3D G3DSA:3.10.450.40 99 161 1.0E-23 T 13-10-2018 COP00_22180 d84489e79a48b947b43aed7b699516a7 407 Pfam PF05975 Bacterial ABC transporter protein EcsB 7 385 2.5E-130 T 13-10-2018 IPR010288 Bacterial ABC transporter EcsB GO:0016021 COP00_22180 d84489e79a48b947b43aed7b699516a7 407 PIRSF PIRSF037259 2 406 1.1E-139 T 13-10-2018 IPR010288 Bacterial ABC transporter EcsB GO:0016021 COP00_22050 d1c028eb6090a1fc2b3775cfd991db06 404 Gene3D G3DSA:1.20.1530.20 2 386 4.1E-65 T 13-10-2018 IPR038770 Sodium/solute symporter superfamily COP00_22050 d1c028eb6090a1fc2b3775cfd991db06 404 Pfam PF00999 Sodium/hydrogen exchanger family 13 378 1.8E-60 T 13-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 COP00_06165 6d29c33d0c0f0a4f9e814a27db9e9a60 200 Gene3D G3DSA:1.10.10.60 2 57 5.6E-16 T 13-10-2018 COP00_06165 6d29c33d0c0f0a4f9e814a27db9e9a60 200 SUPERFAMILY SSF46689 5 70 7.18E-16 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 COP00_06165 6d29c33d0c0f0a4f9e814a27db9e9a60 200 SUPERFAMILY SSF48498 88 192 1.15E-8 T 13-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily COP00_06165 6d29c33d0c0f0a4f9e814a27db9e9a60 200 Gene3D G3DSA:1.10.357.10 58 192 4.2E-11 T 13-10-2018 COP00_06165 6d29c33d0c0f0a4f9e814a27db9e9a60 200 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 2.3E-7 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 COP00_06165 6d29c33d0c0f0a4f9e814a27db9e9a60 200 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 2.3E-7 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 COP00_06165 6d29c33d0c0f0a4f9e814a27db9e9a60 200 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 62 3.1E-16 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 COP00_06410 03715e83fac2a79316a416d9ab8a45c3 102 SUPERFAMILY SSF52794 1 101 1.94E-33 T 13-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 COP00_06410 03715e83fac2a79316a416d9ab8a45c3 102 Gene3D G3DSA:3.40.50.2300 2 102 9.3E-33 T 13-10-2018 COP00_06410 03715e83fac2a79316a416d9ab8a45c3 102 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 3 95 8.4E-21 T 13-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 COP00_06970 480c1579fa47360c298880971a55cbe0 484 PIRSF PIRSF005690 2 484 7.6E-134 T 13-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 COP00_06970 480c1579fa47360c298880971a55cbe0 484 Pfam PF03323 Bacillus/Clostridium GerA spore germination protein 18 475 3.5E-158 T 13-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 COP00_20915 314086f8e06e9099af40537ffbe17542 462 Pfam PF01938 TRAM domain 13 67 1.9E-12 T 13-10-2018 IPR002792 TRAM domain COP00_20915 314086f8e06e9099af40537ffbe17542 462 SUPERFAMILY SSF53335 77 457 5.88E-79 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase COP00_20915 314086f8e06e9099af40537ffbe17542 462 Gene3D G3DSA:3.40.1350.30 139 294 1.1E-112 T 13-10-2018 COP00_20915 314086f8e06e9099af40537ffbe17542 462 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 444 454 - T 13-10-2018 IPR030391 RNA methyltransferase TrmA, conserved site COP00_20915 314086f8e06e9099af40537ffbe17542 462 SUPERFAMILY SSF50249 9 68 7.42E-16 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold COP00_20915 314086f8e06e9099af40537ffbe17542 462 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 98 460 2.4E-21 T 13-10-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 COP00_20915 314086f8e06e9099af40537ffbe17542 462 Gene3D G3DSA:2.40.50.140 4 88 1.9E-23 T 13-10-2018 COP00_20915 314086f8e06e9099af40537ffbe17542 462 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 25 454 1.8E-189 T 13-10-2018 COP00_20915 314086f8e06e9099af40537ffbe17542 462 Gene3D G3DSA:3.40.50.150 90 456 1.1E-112 T 13-10-2018 COP00_20915 314086f8e06e9099af40537ffbe17542 462 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 393 424 - T 13-10-2018 IPR030390 RNA methyltransferase TrmA, active site COP00_21385 7b81100f666b55a9bedd9817f7b0fbd5 255 SMART SM00382 31 208 8.1E-12 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_21385 7b81100f666b55a9bedd9817f7b0fbd5 255 ProSitePatterns PS00211 ABC transporters family signature. 131 145 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 COP00_21385 7b81100f666b55a9bedd9817f7b0fbd5 255 Gene3D G3DSA:3.40.50.300 3 247 3.1E-59 T 13-10-2018 COP00_21385 7b81100f666b55a9bedd9817f7b0fbd5 255 Pfam PF00005 ABC transporter 22 158 3.6E-32 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 COP00_21385 7b81100f666b55a9bedd9817f7b0fbd5 255 SUPERFAMILY SSF52540 16 230 1.98E-63 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_03410 1f5fd0bdd0d8068f0fdddac318a27ec4 162 PIRSF PIRSF005028 1 162 2.6E-55 T 13-10-2018 IPR026278 Potassium/proton antiporter subunit KhtT COP00_03410 1f5fd0bdd0d8068f0fdddac318a27ec4 162 Gene3D G3DSA:3.30.70.1450 84 161 4.3E-22 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 COP00_03410 1f5fd0bdd0d8068f0fdddac318a27ec4 162 Pfam PF02080 TrkA-C domain 90 159 1.7E-17 T 13-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 COP00_03410 1f5fd0bdd0d8068f0fdddac318a27ec4 162 SUPERFAMILY SSF116726 79 158 5.36E-19 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 COP00_09095 bfd525173ec602f9991c2b92dac0538c 372 Gene3D G3DSA:1.10.580.10 25 351 7.0E-130 T 13-10-2018 IPR016142 Citrate synthase-like, large alpha subdomain Reactome: R-HSA-1268020|Reactome: R-HSA-71403 COP00_09095 bfd525173ec602f9991c2b92dac0538c 372 PRINTS PR00143 Citrate synthase signature 304 320 6.6E-45 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 COP00_09095 bfd525173ec602f9991c2b92dac0538c 372 PRINTS PR00143 Citrate synthase signature 324 338 6.6E-45 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 COP00_09095 bfd525173ec602f9991c2b92dac0538c 372 PRINTS PR00143 Citrate synthase signature 194 222 6.6E-45 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 COP00_09095 bfd525173ec602f9991c2b92dac0538c 372 PRINTS PR00143 Citrate synthase signature 172 187 6.6E-45 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 COP00_09095 bfd525173ec602f9991c2b92dac0538c 372 PRINTS PR00143 Citrate synthase signature 247 267 6.6E-45 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 COP00_09095 bfd525173ec602f9991c2b92dac0538c 372 PRINTS PR00143 Citrate synthase signature 123 136 6.6E-45 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 COP00_09095 bfd525173ec602f9991c2b92dac0538c 372 Gene3D G3DSA:1.10.230.10 220 318 7.0E-130 T 13-10-2018 IPR016143 Citrate synthase-like, small alpha subdomain COP00_09095 bfd525173ec602f9991c2b92dac0538c 372 Pfam PF00285 Citrate synthase, C-terminal domain 6 354 9.4E-132 T 13-10-2018 IPR002020 Citrate synthase GO:0046912 COP00_09095 bfd525173ec602f9991c2b92dac0538c 372 PIRSF PIRSF001369 1 372 2.6E-159 T 13-10-2018 IPR024176 Citrate synthase, bacterial-type COP00_09095 bfd525173ec602f9991c2b92dac0538c 372 ProSitePatterns PS00480 Citrate synthase signature. 254 266 - T 13-10-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 COP00_09095 bfd525173ec602f9991c2b92dac0538c 372 TIGRFAM TIGR01800 cit_synth_II: 2-methylcitrate synthase/citrate synthase II 5 371 3.0E-167 T 13-10-2018 IPR011278 2-methylcitrate synthase/citrate synthase type I GO:0005737|GO:0046912 COP00_09095 bfd525173ec602f9991c2b92dac0538c 372 SUPERFAMILY SSF48256 2 371 6.15E-137 T 13-10-2018 IPR036969 Citrate synthase superfamily GO:0046912 COP00_19460 3f95f5f34257495a51deed3422a92f25 327 PIRSF PIRSF005303 1 323 2.1E-98 T 13-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 COP00_19460 3f95f5f34257495a51deed3422a92f25 327 SUPERFAMILY SSF56042 144 305 3.29E-31 T 13-10-2018 IPR036676 PurM-like, C-terminal domain superfamily COP00_19460 3f95f5f34257495a51deed3422a92f25 327 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 2 323 1.3E-113 T 13-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 COP00_19460 3f95f5f34257495a51deed3422a92f25 327 Gene3D G3DSA:3.30.1330.10 1 145 5.0E-41 T 13-10-2018 IPR036921 PurM-like, N-terminal domain superfamily COP00_19460 3f95f5f34257495a51deed3422a92f25 327 Gene3D G3DSA:3.90.650.10 146 323 8.5E-49 T 13-10-2018 IPR036676 PurM-like, C-terminal domain superfamily COP00_19460 3f95f5f34257495a51deed3422a92f25 327 Pfam PF00586 AIR synthase related protein, N-terminal domain 26 139 1.8E-21 T 13-10-2018 IPR016188 PurM-like, N-terminal domain COP00_19460 3f95f5f34257495a51deed3422a92f25 327 Pfam PF02769 AIR synthase related protein, C-terminal domain 151 303 3.3E-11 T 13-10-2018 IPR010918 PurM-like, C-terminal domain COP00_19460 3f95f5f34257495a51deed3422a92f25 327 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 1 323 29.114 T 13-10-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 COP00_19460 3f95f5f34257495a51deed3422a92f25 327 SUPERFAMILY SSF55326 3 140 6.28E-32 T 13-10-2018 IPR036921 PurM-like, N-terminal domain superfamily COP00_06060 57bcafb2e91fb1bee3c83f855243fb11 149 TIGRFAM TIGR02838 spore_V_AC: stage V sporulation protein AC 7 144 1.7E-65 T 13-10-2018 IPR014203 Sporulation stage V, protein AC COP00_06060 57bcafb2e91fb1bee3c83f855243fb11 149 Pfam PF03862 SpoVAC/SpoVAEB sporulation membrane protein 24 141 1.2E-42 T 13-10-2018 IPR005562 SpoVA COP00_06090 51fda4b1e43d9c4226982195789af004 390 Gene3D G3DSA:2.60.410.10 280 370 3.2E-20 T 13-10-2018 IPR037167 D-Ala-D-Ala carboxypeptidase, C-terminal domain superfamily GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 COP00_06090 51fda4b1e43d9c4226982195789af004 390 SUPERFAMILY SSF56601 3 280 2.26E-79 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like COP00_06090 51fda4b1e43d9c4226982195789af004 390 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 143 156 6.9E-17 T 13-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 COP00_06090 51fda4b1e43d9c4226982195789af004 390 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 63 74 6.9E-17 T 13-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 COP00_06090 51fda4b1e43d9c4226982195789af004 390 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 116 133 6.9E-17 T 13-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 COP00_06090 51fda4b1e43d9c4226982195789af004 390 Gene3D G3DSA:3.40.710.10 16 279 4.5E-90 T 13-10-2018 COP00_06090 51fda4b1e43d9c4226982195789af004 390 SUPERFAMILY SSF69189 272 368 6.08E-20 T 13-10-2018 IPR015956 Penicillin-binding protein, C-terminal domain superfamily GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 COP00_06090 51fda4b1e43d9c4226982195789af004 390 SMART SM00936 280 371 7.2E-27 T 13-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 COP00_06090 51fda4b1e43d9c4226982195789af004 390 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 29 260 1.6E-90 T 13-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 COP00_06090 51fda4b1e43d9c4226982195789af004 390 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 280 370 1.1E-18 T 13-10-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 COP00_07975 035213cc73adfff3a39adf38acbe699f 123 Gene3D G3DSA:1.10.10.10 1 109 2.9E-38 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_07975 035213cc73adfff3a39adf38acbe699f 123 SUPERFAMILY SSF46785 2 110 1.43E-33 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_07975 035213cc73adfff3a39adf38acbe699f 123 Pfam PF01638 HxlR-like helix-turn-helix 16 104 5.1E-39 T 13-10-2018 IPR002577 Helix-turn-helix, HxlR type COP00_17210 753e6251b6eadecbd4cb894c872f2771 63 ProDom PD053503 YBXH ORF3 1 63 4.0E-26 T 13-10-2018 IPR035314 Protein of unknown function DUF5370 COP00_17210 753e6251b6eadecbd4cb894c872f2771 63 Pfam PF17340 Family of unknown function (DUF5370) 1 63 2.5E-36 T 13-10-2018 IPR035314 Protein of unknown function DUF5370 COP00_24400 77c468e8afc60385fe814014bddc62e5 276 Gene3D G3DSA:3.30.1360.170 43 276 7.1E-55 T 13-10-2018 COP00_24400 77c468e8afc60385fe814014bddc62e5 276 Hamap MF_01408 Flavin-dependent thymidylate synthase [thyX]. 6 276 22.053 T 13-10-2018 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00670+2.1.1.148|MetaCyc: PWY-6545 COP00_24400 77c468e8afc60385fe814014bddc62e5 276 Pfam PF02511 Thymidylate synthase complementing protein 44 267 5.5E-52 T 13-10-2018 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00670+2.1.1.148|MetaCyc: PWY-6545 COP00_24400 77c468e8afc60385fe814014bddc62e5 276 SUPERFAMILY SSF69796 57 275 2.35E-43 T 13-10-2018 IPR036098 Thymidylate synthase ThyX superfamily GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00670+2.1.1.148|MetaCyc: PWY-6545 COP00_24400 77c468e8afc60385fe814014bddc62e5 276 TIGRFAM TIGR02170 thyX: thymidylate synthase, flavin-dependent 22 273 9.3E-58 T 13-10-2018 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00670+2.1.1.148|MetaCyc: PWY-6545 COP00_00900 f027b8e22b923b849cc8c953b16c34b7 1434 Gene3D G3DSA:2.60.40.10 1241 1323 1.4E-20 T 13-10-2018 IPR013783 Immunoglobulin-like fold COP00_00900 f027b8e22b923b849cc8c953b16c34b7 1434 Gene3D G3DSA:2.60.40.10 1159 1237 4.3E-12 T 13-10-2018 IPR013783 Immunoglobulin-like fold COP00_00900 f027b8e22b923b849cc8c953b16c34b7 1434 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 447 457 - T 13-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site COP00_00900 f027b8e22b923b849cc8c953b16c34b7 1434 SUPERFAMILY SSF49464 911 1007 2.09E-13 T 13-10-2018 IPR008969 Carboxypeptidase-like, regulatory domain superfamily COP00_00900 f027b8e22b923b849cc8c953b16c34b7 1434 Pfam PF13715 CarboxypepD_reg-like domain 843 906 2.1E-8 T 13-10-2018 COP00_00900 f027b8e22b923b849cc8c953b16c34b7 1434 Gene3D G3DSA:2.60.40.1120 911 989 1.4E-11 T 13-10-2018 COP00_00900 f027b8e22b923b849cc8c953b16c34b7 1434 SUPERFAMILY SSF52743 196 511 1.44E-70 T 13-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 COP00_00900 f027b8e22b923b849cc8c953b16c34b7 1434 SUPERFAMILY SSF49464 844 905 3.53E-9 T 13-10-2018 IPR008969 Carboxypeptidase-like, regulatory domain superfamily COP00_00900 f027b8e22b923b849cc8c953b16c34b7 1434 Pfam PF05922 Peptidase inhibitor I9 68 177 1.9E-7 T 13-10-2018 IPR010259 Peptidase S8 propeptide/proteinase inhibitor I9 Reactome: R-HSA-381426|Reactome: R-HSA-8866427|Reactome: R-HSA-8957275|Reactome: R-HSA-8964038 COP00_00900 f027b8e22b923b849cc8c953b16c34b7 1434 Pfam PF13620 Carboxypeptidase regulatory-like domain 911 986 6.8E-11 T 13-10-2018 COP00_00900 f027b8e22b923b849cc8c953b16c34b7 1434 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 271 281 - T 13-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site COP00_00900 f027b8e22b923b849cc8c953b16c34b7 1434 PIRSF PIRSF015477 1 1434 0.0 T 13-10-2018 IPR012103 Peptidase S8A, bacillopeptidase F COP00_00900 f027b8e22b923b849cc8c953b16c34b7 1434 SUPERFAMILY SSF49899 634 786 1.74E-8 T 13-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily COP00_00900 f027b8e22b923b849cc8c953b16c34b7 1434 PRINTS PR00723 Subtilisin serine protease family (S8) signature 446 462 3.7E-15 T 13-10-2018 IPR015500 Peptidase S8, subtilisin-related COP00_00900 f027b8e22b923b849cc8c953b16c34b7 1434 PRINTS PR00723 Subtilisin serine protease family (S8) signature 267 280 3.7E-15 T 13-10-2018 IPR015500 Peptidase S8, subtilisin-related COP00_00900 f027b8e22b923b849cc8c953b16c34b7 1434 PRINTS PR00723 Subtilisin serine protease family (S8) signature 215 234 3.7E-15 T 13-10-2018 IPR015500 Peptidase S8, subtilisin-related COP00_00900 f027b8e22b923b849cc8c953b16c34b7 1434 Pfam PF05547 Immune inhibitor A peptidase M6 691 784 1.6E-10 T 13-10-2018 IPR008757 Peptidase M6-like, domain GO:0006508|GO:0008233 COP00_00900 f027b8e22b923b849cc8c953b16c34b7 1434 Pfam PF00082 Subtilase family 215 501 2.9E-50 T 13-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 COP00_00900 f027b8e22b923b849cc8c953b16c34b7 1434 Gene3D G3DSA:3.40.50.200 187 512 6.9E-80 T 13-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 COP00_00900 f027b8e22b923b849cc8c953b16c34b7 1434 Gene3D G3DSA:2.60.40.1120 827 906 2.8E-12 T 13-10-2018 COP00_20700 db1c1d9f48e33f9a9a790daad27346f5 653 Gene3D G3DSA:3.40.720.10 237 545 2.6E-82 T 13-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 COP00_20700 db1c1d9f48e33f9a9a790daad27346f5 653 PIRSF PIRSF005091 1 619 1.9E-188 T 13-10-2018 IPR012160 Lipoteichoic acid synthase-like COP00_20700 db1c1d9f48e33f9a9a790daad27346f5 653 SUPERFAMILY SSF53649 243 636 3.76E-82 T 13-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 COP00_20700 db1c1d9f48e33f9a9a790daad27346f5 653 Pfam PF00884 Sulfatase 246 535 2.5E-45 T 13-10-2018 IPR000917 Sulfatase, N-terminal GO:0008484 COP00_05085 f575083be34e6b3707edfda15f5e825f 469 Gene3D G3DSA:2.40.50.600 349 414 6.3E-20 T 13-10-2018 COP00_05085 f575083be34e6b3707edfda15f5e825f 469 Pfam PF13353 4Fe-4S single cluster domain 127 199 5.7E-5 T 13-10-2018 COP00_05085 f575083be34e6b3707edfda15f5e825f 469 Pfam PF12544 Lysine-2,3-aminomutase 321 447 8.1E-60 T 13-10-2018 IPR025895 Lysine-2,3-aminomutase, C-terminal domain COP00_05085 f575083be34e6b3707edfda15f5e825f 469 TIGRFAM TIGR03820 lys_2_3_AblA: lysine-2,3-aminomutase 23 427 3.2E-192 T 13-10-2018 IPR022459 Lysine-2,3-aminomutase KEGG: 00310+5.4.3.2 COP00_05085 f575083be34e6b3707edfda15f5e825f 469 Pfam PF04055 Radical SAM superfamily 130 277 1.8E-7 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 COP00_05085 f575083be34e6b3707edfda15f5e825f 469 PIRSF PIRSF004911 2 405 8.9E-161 T 13-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase COP00_05085 f575083be34e6b3707edfda15f5e825f 469 SUPERFAMILY SSF102114 114 406 2.09E-35 T 13-10-2018 COP00_05085 f575083be34e6b3707edfda15f5e825f 469 Gene3D G3DSA:3.20.20.70 63 348 5.0E-120 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 COP00_05085 f575083be34e6b3707edfda15f5e825f 469 TIGRFAM TIGR00238 TIGR00238: KamA family protein 13 342 1.6E-151 T 13-10-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase COP00_05790 19dba1e27999061a35450a8114770f4c 222 Pfam PF13367 Protease prsW family 28 199 9.2E-33 T 13-10-2018 IPR026898 Protease PrsW GO:0008233 COP00_05790 19dba1e27999061a35450a8114770f4c 222 PIRSF PIRSF016933 1 220 5.4E-89 T 13-10-2018 IPR023596 Peptidase PrsW, archaeal/bacterial GO:0008233 COP00_16965 adbf1940dcc6a0996facc67a9c4198eb 305 Gene3D G3DSA:1.10.8.1080 222 299 4.3E-28 T 13-10-2018 COP00_16965 adbf1940dcc6a0996facc67a9c4198eb 305 Pfam PF01380 SIS domain 131 201 6.3E-11 T 13-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 COP00_16965 adbf1940dcc6a0996facc67a9c4198eb 305 Hamap MF_00068 N-acetylmuramic acid 6-phosphate etherase [murQ]. 5 298 42.891 T 13-10-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 COP00_16965 adbf1940dcc6a0996facc67a9c4198eb 305 Gene3D G3DSA:3.40.50.10490 2 221 1.4E-81 T 13-10-2018 COP00_16965 adbf1940dcc6a0996facc67a9c4198eb 305 SUPERFAMILY SSF53697 9 250 7.89E-73 T 13-10-2018 COP00_16965 adbf1940dcc6a0996facc67a9c4198eb 305 TIGRFAM TIGR00274 TIGR00274: N-acetylmuramic acid 6-phosphate etherase 9 298 1.1E-135 T 13-10-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00520+4.2.1.126 COP00_16965 adbf1940dcc6a0996facc67a9c4198eb 305 ProSitePatterns PS01272 Glucokinase regulatory protein family signature. 188 205 - T 13-10-2018 IPR005486 Glucokinase regulatory protein, conserved site KEGG: 00520+4.2.1.126|Reactome: R-HSA-170822|Reactome: R-HSA-5619107 COP00_05310 15c566daf7e0403cd245c0136beb3a08 132 SUPERFAMILY SSF53098 2 123 2.91E-27 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily COP00_05310 15c566daf7e0403cd245c0136beb3a08 132 Gene3D G3DSA:3.30.420.10 2 128 1.7E-27 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 COP00_05310 15c566daf7e0403cd245c0136beb3a08 132 Pfam PF13456 Reverse transcriptase-like 8 125 9.9E-18 T 13-10-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 COP00_07890 a2d6bb9216aa1b178e81d9087d8d76fd 418 SUPERFAMILY SSF56059 110 326 4.95E-38 T 13-10-2018 COP00_07890 a2d6bb9216aa1b178e81d9087d8d76fd 418 Pfam PF13535 ATP-grasp domain 147 297 1.4E-20 T 13-10-2018 COP00_07890 a2d6bb9216aa1b178e81d9087d8d76fd 418 Gene3D G3DSA:3.30.470.20 104 418 2.8E-74 T 13-10-2018 COP00_07890 a2d6bb9216aa1b178e81d9087d8d76fd 418 Gene3D G3DSA:3.40.50.20 2 102 7.1E-6 T 13-10-2018 COP00_17440 6ce7fb951eaf06bf72b007011df6f837 186 Pfam PF04203 Sortase family 64 186 8.6E-27 T 13-10-2018 IPR005754 Sortase family COP00_17440 6ce7fb951eaf06bf72b007011df6f837 186 SUPERFAMILY SSF63817 53 186 1.16E-33 T 13-10-2018 IPR023365 Sortase domain superfamily COP00_17440 6ce7fb951eaf06bf72b007011df6f837 186 TIGRFAM TIGR01076 sortase_fam: sortase 62 186 4.0E-45 T 13-10-2018 IPR005754 Sortase family COP00_17440 6ce7fb951eaf06bf72b007011df6f837 186 Gene3D G3DSA:2.40.260.10 24 186 2.1E-41 T 13-10-2018 IPR023365 Sortase domain superfamily COP00_13140 7cb3b9ab635ae0d6a6e176426ae375f2 385 PIRSF PIRSF003169 1 385 9.9E-164 T 13-10-2018 IPR016381 Signal transduction histidine kinase, DegS GO:0000155|GO:0000160|GO:0004673 COP00_13140 7cb3b9ab635ae0d6a6e176426ae375f2 385 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 292 384 8.8E-10 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase COP00_13140 7cb3b9ab635ae0d6a6e176426ae375f2 385 Pfam PF05384 Sensor protein DegS 12 170 2.1E-58 T 13-10-2018 IPR008595 Sensor DegS GO:0007165|GO:0016301 COP00_13140 7cb3b9ab635ae0d6a6e176426ae375f2 385 Gene3D G3DSA:3.30.565.10 256 383 3.4E-29 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily COP00_13140 7cb3b9ab635ae0d6a6e176426ae375f2 385 SUPERFAMILY SSF55874 254 383 1.07E-20 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily COP00_13140 7cb3b9ab635ae0d6a6e176426ae375f2 385 SMART SM00387 289 385 2.0E-10 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase COP00_13140 7cb3b9ab635ae0d6a6e176426ae375f2 385 Pfam PF07730 Histidine kinase 180 248 9.3E-17 T 13-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 COP00_03440 882a687f81408c4cddeb63260fe33027 144 SUPERFAMILY SSF51283 20 143 2.36E-26 T 13-10-2018 IPR036157 dUTPase-like superfamily COP00_03440 882a687f81408c4cddeb63260fe33027 144 Pfam PF00692 dUTPase 27 141 2.1E-16 T 13-10-2018 IPR029054 dUTPase-like COP00_03440 882a687f81408c4cddeb63260fe33027 144 Gene3D G3DSA:2.70.40.10 1 144 7.6E-43 T 13-10-2018 IPR036157 dUTPase-like superfamily COP00_00710 d4cff6451b04b25c7e4dc8e9da1e9b48 296 Pfam PF09678 Cytochrome c oxidase caa3 assembly factor (Caa3_CtaG) 26 278 1.2E-63 T 13-10-2018 IPR019108 Cytochrome c oxidase caa3-type, assembly factor CtaG-related COP00_00710 d4cff6451b04b25c7e4dc8e9da1e9b48 296 TIGRFAM TIGR02737 caa3_CtaG: cytochrome c oxidase assembly factor CtaG 4 280 2.9E-123 T 13-10-2018 IPR014108 Cytochrome c oxidase caa3 type assembly factor CtaG COP00_05345 2c63554c5da8592e0ab4bf8672ae6149 169 Pfam PF04140 Isoprenylcysteine carboxyl methyltransferase (ICMT) family 76 165 1.1E-29 T 13-10-2018 IPR007269 Isoprenylcysteine carboxyl methyltransferase GO:0004671|GO:0006481|GO:0016021 Reactome: R-HSA-163841 COP00_05345 2c63554c5da8592e0ab4bf8672ae6149 169 Gene3D G3DSA:1.20.120.1630 1 168 1.3E-23 T 13-10-2018 COP00_16725 c78531dbe092bf4e3a82a9579ad5b198 87 ProSitePatterns PS00056 Ribosomal protein S17 signature. 58 70 - T 13-10-2018 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 COP00_16725 c78531dbe092bf4e3a82a9579ad5b198 87 Gene3D G3DSA:2.40.50.140 6 86 1.3E-36 T 13-10-2018 COP00_16725 c78531dbe092bf4e3a82a9579ad5b198 87 PRINTS PR00973 Ribosomal protein S17 family signature 26 49 1.4E-12 T 13-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 COP00_16725 c78531dbe092bf4e3a82a9579ad5b198 87 PRINTS PR00973 Ribosomal protein S17 family signature 68 75 1.4E-12 T 13-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 COP00_16725 c78531dbe092bf4e3a82a9579ad5b198 87 PRINTS PR00973 Ribosomal protein S17 family signature 58 68 1.4E-12 T 13-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 COP00_16725 c78531dbe092bf4e3a82a9579ad5b198 87 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 7 82 24.787 T 13-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 COP00_16725 c78531dbe092bf4e3a82a9579ad5b198 87 Pfam PF00366 Ribosomal protein S17 12 79 2.6E-33 T 13-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 COP00_16725 c78531dbe092bf4e3a82a9579ad5b198 87 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 7 78 5.0E-35 T 13-10-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 COP00_16725 c78531dbe092bf4e3a82a9579ad5b198 87 SUPERFAMILY SSF50249 7 84 2.57E-32 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold COP00_16725 c78531dbe092bf4e3a82a9579ad5b198 87 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 7 78 2.0E-36 T 13-10-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 COP00_06510 5902363d8d14895f417dd904781ff00f 370 PRINTS PR00471 Acetate kinase family signature 277 290 2.6E-15 T 13-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 COP00_06510 5902363d8d14895f417dd904781ff00f 370 PRINTS PR00471 Acetate kinase family signature 300 316 2.6E-15 T 13-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 COP00_06510 5902363d8d14895f417dd904781ff00f 370 PRINTS PR00471 Acetate kinase family signature 8 19 2.6E-15 T 13-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 COP00_06510 5902363d8d14895f417dd904781ff00f 370 PRINTS PR00471 Acetate kinase family signature 182 203 2.6E-15 T 13-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 COP00_06510 5902363d8d14895f417dd904781ff00f 370 Hamap MF_00542 Probable butyrate kinase [buk]. 1 370 171.934 T 13-10-2018 IPR011245 Butyrate kinase GO:0005524|GO:0005737|GO:0016310|GO:0047761 KEGG: 00650+2.7.2.7 COP00_06510 5902363d8d14895f417dd904781ff00f 370 Gene3D G3DSA:3.30.420.40 140 335 2.6E-159 T 13-10-2018 COP00_06510 5902363d8d14895f417dd904781ff00f 370 PIRSF PIRSF036458 4 359 2.6E-174 T 13-10-2018 IPR011245 Butyrate kinase GO:0005524|GO:0005737|GO:0016310|GO:0047761 KEGG: 00650+2.7.2.7 COP00_06510 5902363d8d14895f417dd904781ff00f 370 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 8 19 - T 13-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 COP00_06510 5902363d8d14895f417dd904781ff00f 370 Gene3D G3DSA:3.30.420.40 7 358 2.6E-159 T 13-10-2018 COP00_06510 5902363d8d14895f417dd904781ff00f 370 SUPERFAMILY SSF53067 120 351 1.2E-56 T 13-10-2018 COP00_06510 5902363d8d14895f417dd904781ff00f 370 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 182 199 - T 13-10-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 COP00_06510 5902363d8d14895f417dd904781ff00f 370 Pfam PF00871 Acetokinase family 8 345 1.4E-71 T 13-10-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 COP00_06510 5902363d8d14895f417dd904781ff00f 370 SUPERFAMILY SSF53067 7 175 4.29E-72 T 13-10-2018 COP00_06510 5902363d8d14895f417dd904781ff00f 370 TIGRFAM TIGR02707 butyr_kinase: butyrate kinase 7 357 1.3E-175 T 13-10-2018 IPR011245 Butyrate kinase GO:0005524|GO:0005737|GO:0016310|GO:0047761 KEGG: 00650+2.7.2.7 COP00_04370 0aa5da85e9bf1e9b23d85775b4c6dc72 519 SUPERFAMILY SSF56300 146 487 7.59E-40 T 13-10-2018 COP00_04370 0aa5da85e9bf1e9b23d85775b4c6dc72 519 Gene3D G3DSA:2.60.40.380 32 140 4.5E-39 T 13-10-2018 IPR008963 Purple acid phosphatase-like, N-terminal GO:0003993|GO:0046872 COP00_04370 0aa5da85e9bf1e9b23d85775b4c6dc72 519 Pfam PF09423 PhoD-like phosphatase 150 484 3.2E-112 T 13-10-2018 IPR018946 Alkaline phosphatase D-related COP00_04370 0aa5da85e9bf1e9b23d85775b4c6dc72 519 SUPERFAMILY SSF49363 65 139 4.45E-5 T 13-10-2018 IPR008963 Purple acid phosphatase-like, N-terminal GO:0003993|GO:0046872 COP00_04370 0aa5da85e9bf1e9b23d85775b4c6dc72 519 Pfam PF16655 PhoD-like phosphatase, N-terminal domain 42 137 1.4E-29 T 13-10-2018 IPR032093 Phospholipase D, N-terminal COP00_04370 0aa5da85e9bf1e9b23d85775b4c6dc72 519 Gene3D G3DSA:3.60.21.70 142 519 1.8E-149 T 13-10-2018 IPR038607 PhoD-like superfamily COP00_17695 ae5073ebd4e63217b50a6f1322c37d56 308 Hamap MF_00694 Probable 5-dehydro-4-deoxyglucarate dehydratase. 7 298 39.807 T 13-10-2018 IPR017655 5-dehydro-4-deoxyglucarate dehydratase GO:0016052|GO:0047448 KEGG: 00053+4.2.1.41|MetaCyc: PWY-6486|MetaCyc: PWY-6497|MetaCyc: PWY-6499|MetaCyc: PWY-6501 COP00_17695 ae5073ebd4e63217b50a6f1322c37d56 308 PIRSF PIRSF001365 5 307 5.9E-51 T 13-10-2018 IPR002220 DapA-like GO:0016829 COP00_17695 ae5073ebd4e63217b50a6f1322c37d56 308 TIGRFAM TIGR03249 KdgD: 5-dehydro-4-deoxyglucarate dehydratase 3 297 2.1E-137 T 13-10-2018 IPR017655 5-dehydro-4-deoxyglucarate dehydratase GO:0016052|GO:0047448 KEGG: 00053+4.2.1.41|MetaCyc: PWY-6486|MetaCyc: PWY-6497|MetaCyc: PWY-6499|MetaCyc: PWY-6501 COP00_17695 ae5073ebd4e63217b50a6f1322c37d56 308 SUPERFAMILY SSF51569 7 296 9.42E-60 T 13-10-2018 COP00_17695 ae5073ebd4e63217b50a6f1322c37d56 308 Gene3D G3DSA:3.20.20.70 2 304 9.1E-76 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 COP00_17695 ae5073ebd4e63217b50a6f1322c37d56 308 Pfam PF00701 Dihydrodipicolinate synthetase family 8 296 2.6E-93 T 13-10-2018 IPR002220 DapA-like GO:0016829 COP00_17695 ae5073ebd4e63217b50a6f1322c37d56 308 SMART SM01130 7 298 1.2E-64 T 13-10-2018 IPR002220 DapA-like GO:0016829 COP00_18640 68124de146d243e819dc9fc60a713a22 439 PIRSF PIRSF000521 129 437 5.9E-40 T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 COP00_18640 68124de146d243e819dc9fc60a713a22 439 PIRSF PIRSF000521 33 136 1.3E-7 T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 COP00_18640 68124de146d243e819dc9fc60a713a22 439 SUPERFAMILY SSF53383 30 435 5.3E-133 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase COP00_18640 68124de146d243e819dc9fc60a713a22 439 Gene3D G3DSA:3.90.1150.10 13 430 1.4E-161 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 COP00_18640 68124de146d243e819dc9fc60a713a22 439 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 249 286 - T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 COP00_18640 68124de146d243e819dc9fc60a713a22 439 TIGRFAM TIGR00700 GABAtrnsam: 4-aminobutyrate transaminase 16 435 1.4E-221 T 13-10-2018 IPR004632 4-aminobutyrate aminotransferase, bacterial GO:0003867|GO:0009448 COP00_18640 68124de146d243e819dc9fc60a713a22 439 Pfam PF00202 Aminotransferase class-III 31 434 3.0E-126 T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 COP00_18640 68124de146d243e819dc9fc60a713a22 439 Gene3D G3DSA:3.40.640.10 65 332 1.4E-161 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 COP00_17675 fc9d38986778a7151c639d570db26929 180 SUPERFAMILY SSF55729 3 175 5.01E-50 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase COP00_17675 fc9d38986778a7151c639d570db26929 180 Gene3D G3DSA:3.40.630.30 1 180 7.2E-49 T 13-10-2018 COP00_17675 fc9d38986778a7151c639d570db26929 180 Pfam PF13302 Acetyltransferase (GNAT) domain 10 149 5.0E-31 T 13-10-2018 IPR000182 GNAT domain COP00_15320 4459d5a60e1d83235466078b8da9dd8b 453 Gene3D G3DSA:1.20.1250.20 18 234 8.8E-54 T 13-10-2018 COP00_15320 4459d5a60e1d83235466078b8da9dd8b 453 TIGRFAM TIGR00712 glpT: glycerol-3-phosphate transporter 1 445 1.2E-212 T 13-10-2018 IPR005267 Glycerol-3-phosphate transporter GO:0015169|GO:0015794|GO:0016021 COP00_15320 4459d5a60e1d83235466078b8da9dd8b 453 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 35 425 5.9E-147 T 13-10-2018 COP00_15320 4459d5a60e1d83235466078b8da9dd8b 453 SUPERFAMILY SSF103473 10 443 7.59E-81 T 13-10-2018 IPR036259 MFS transporter superfamily COP00_15320 4459d5a60e1d83235466078b8da9dd8b 453 ProSitePatterns PS00942 glpT family of transporters signature. 153 169 - T 13-10-2018 IPR021159 Glycerate/sugar phosphate transporter, conserved site Reactome: R-HSA-3229133|Reactome: R-HSA-70263 COP00_15320 4459d5a60e1d83235466078b8da9dd8b 453 Gene3D G3DSA:1.20.1250.20 248 448 1.7E-56 T 13-10-2018 COP00_15320 4459d5a60e1d83235466078b8da9dd8b 453 PIRSF PIRSF002808 5 453 1.5E-157 T 13-10-2018 IPR000849 Sugar phosphate transporter GO:0016021|GO:0022857|GO:0055085 COP00_15320 4459d5a60e1d83235466078b8da9dd8b 453 Pfam PF07690 Major Facilitator Superfamily 34 406 1.6E-47 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 COP00_15290 111a3d3fcbee0909346b4728692315ce 325 Hamap MF_01668 5-dehydro-2-deoxygluconokinase [iolC]. 7 325 55.217 T 13-10-2018 IPR022841 5-dehydro-2-deoxygluconokinase, Firmicutes GO:0016310|GO:0047590 KEGG: 00562+2.7.1.92 COP00_15290 111a3d3fcbee0909346b4728692315ce 325 TIGRFAM TIGR04382 myo_inos_iolC_N: 5-dehydro-2-deoxygluconokinase 11 321 1.6E-121 T 13-10-2018 IPR030830 5-Dehydro-2-deoxygluconokinase KEGG: 00562+2.7.1.92 COP00_15290 111a3d3fcbee0909346b4728692315ce 325 Pfam PF00294 pfkB family carbohydrate kinase 12 313 1.5E-68 T 13-10-2018 IPR011611 Carbohydrate kinase PfkB COP00_15290 111a3d3fcbee0909346b4728692315ce 325 Gene3D G3DSA:3.40.1190.20 14 300 1.8E-104 T 13-10-2018 IPR029056 Ribokinase-like COP00_15290 111a3d3fcbee0909346b4728692315ce 325 Gene3D G3DSA:2.20.150.10 19 115 1.8E-104 T 13-10-2018 IPR023314 5-Dehydro-2-deoxygluconokinase-like superfamily KEGG: 00562+2.7.1.92 COP00_15290 111a3d3fcbee0909346b4728692315ce 325 SUPERFAMILY SSF53613 10 321 2.03E-73 T 13-10-2018 IPR029056 Ribokinase-like COP00_15290 111a3d3fcbee0909346b4728692315ce 325 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 265 278 - T 13-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 COP00_05050 15912efe9fbd92f9a3fa2857ff293505 106 ProDom PD030115 YODL GK1575 3 106 5.0E-52 T 13-10-2018 COP00_05050 15912efe9fbd92f9a3fa2857ff293505 106 Pfam PF14191 YodL-like 28 89 2.0E-7 T 13-10-2018 IPR025923 YodL-like COP00_06605 d6b9b3d85b9a281ffdebcbb919bad31f 129 Hamap MF_00073 Transcription antitermination protein NusB [nusB]. 1 129 25.335 T 13-10-2018 IPR011605 NusB antitermination factor GO:0006353 COP00_06605 d6b9b3d85b9a281ffdebcbb919bad31f 129 Pfam PF01029 NusB family 4 124 3.4E-41 T 13-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 COP00_06605 d6b9b3d85b9a281ffdebcbb919bad31f 129 Gene3D G3DSA:1.10.940.10 1 129 3.7E-45 T 13-10-2018 IPR035926 NusB-like superfamily COP00_06605 d6b9b3d85b9a281ffdebcbb919bad31f 129 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 2 127 4.9E-45 T 13-10-2018 IPR011605 NusB antitermination factor GO:0006353 COP00_06605 d6b9b3d85b9a281ffdebcbb919bad31f 129 SUPERFAMILY SSF48013 2 126 7.33E-41 T 13-10-2018 IPR035926 NusB-like superfamily COP00_05390 7b479da1d5f16db5bed3c265ce05bf4b 382 Gene3D G3DSA:3.40.50.150 162 367 7.6E-128 T 13-10-2018 COP00_05390 7b479da1d5f16db5bed3c265ce05bf4b 382 Pfam PF02926 THUMP domain 18 156 1.9E-20 T 13-10-2018 IPR004114 THUMP domain GO:0003723 COP00_05390 7b479da1d5f16db5bed3c265ce05bf4b 382 SUPERFAMILY SSF53335 144 362 1.04E-38 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase COP00_05390 7b479da1d5f16db5bed3c265ce05bf4b 382 Pfam PF01170 Putative RNA methylase family UPF0020 164 368 1.8E-66 T 13-10-2018 IPR000241 Putative RNA methylase domain COP00_05390 7b479da1d5f16db5bed3c265ce05bf4b 382 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 301 307 - T 13-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 COP00_05390 7b479da1d5f16db5bed3c265ce05bf4b 382 Gene3D G3DSA:3.30.2130.30 8 247 7.6E-128 T 13-10-2018 COP00_05390 7b479da1d5f16db5bed3c265ce05bf4b 382 ProSitePatterns PS01261 Uncharacterized protein family UPF0020 signature. 197 208 - T 13-10-2018 IPR000241 Putative RNA methylase domain COP00_05390 7b479da1d5f16db5bed3c265ce05bf4b 382 SMART SM00981 57 156 6.6E-12 T 13-10-2018 IPR004114 THUMP domain GO:0003723 COP00_16245 ab7ca34a51ff3c909be7ca8ace73eb11 61 Gene3D G3DSA:1.10.8.910 4 61 1.8E-5 T 13-10-2018 IPR038300 SASP, alpha/beta-type superfamily COP00_16245 ab7ca34a51ff3c909be7ca8ace73eb11 61 ProSitePatterns PS00304 Small, acid-soluble spore proteins, alpha/beta type, signature 1. 13 22 - T 13-10-2018 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site GO:0003690|GO:0006265 COP00_16245 ab7ca34a51ff3c909be7ca8ace73eb11 61 Pfam PF00269 Small, acid-soluble spore proteins, alpha/beta type 10 54 6.8E-7 T 13-10-2018 IPR001448 Small acid-soluble spore protein, alpha/beta-type GO:0003690|GO:0006265 COP00_04980 7de966f596f5e023478b4e44ea6f7143 109 Gene3D G3DSA:1.10.10.10 3 107 3.6E-37 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_04980 7de966f596f5e023478b4e44ea6f7143 109 Pfam PF01638 HxlR-like helix-turn-helix 15 103 3.1E-35 T 13-10-2018 IPR002577 Helix-turn-helix, HxlR type COP00_04980 7de966f596f5e023478b4e44ea6f7143 109 SUPERFAMILY SSF46785 5 107 4.45E-30 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_18155 9b51e40d76969aab79e77b889b5730d0 138 Gene3D G3DSA:1.10.10.10 4 134 2.3E-24 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_18155 9b51e40d76969aab79e77b889b5730d0 138 SMART SM00347 20 120 6.4E-11 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 COP00_18155 9b51e40d76969aab79e77b889b5730d0 138 SUPERFAMILY SSF46785 20 131 8.65E-23 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_18155 9b51e40d76969aab79e77b889b5730d0 138 Pfam PF01047 MarR family 27 85 3.5E-9 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 COP00_00665 3f2e57e4d04aa7f844d31bee9ed4e4cf 93 SUPERFAMILY SSF140404 6 84 2.35E-37 T 13-10-2018 IPR036270 UPF0358 superfamily COP00_00665 3f2e57e4d04aa7f844d31bee9ed4e4cf 93 Hamap MF_01560 UPF0358 protein . 3 93 27.603 T 13-10-2018 IPR009983 Uncharacterised protein family UPF0358 COP00_00665 3f2e57e4d04aa7f844d31bee9ed4e4cf 93 Pfam PF07408 Protein of unknown function (DUF1507) 9 91 4.0E-42 T 13-10-2018 IPR009983 Uncharacterised protein family UPF0358 COP00_00665 3f2e57e4d04aa7f844d31bee9ed4e4cf 93 Gene3D G3DSA:1.10.287.750 4 93 3.6E-38 T 13-10-2018 IPR036270 UPF0358 superfamily COP00_23170 aee29747d1f7137f1016df19e106afef 285 Gene3D G3DSA:1.10.10.60 158 263 1.3E-15 T 13-10-2018 COP00_23170 aee29747d1f7137f1016df19e106afef 285 SMART SM00342 178 262 6.5E-4 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 COP00_23170 aee29747d1f7137f1016df19e106afef 285 Pfam PF12833 Helix-turn-helix domain 185 262 2.5E-13 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 COP00_23170 aee29747d1f7137f1016df19e106afef 285 SUPERFAMILY SSF46689 226 264 7.62E-6 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 COP00_13425 f8da11d5f672c1713f437fa7a02cd413 311 SUPERFAMILY SSF53850 91 308 1.47E-37 T 13-10-2018 COP00_13425 f8da11d5f672c1713f437fa7a02cd413 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.2E-10 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 COP00_13425 f8da11d5f672c1713f437fa7a02cd413 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.2E-10 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 COP00_13425 f8da11d5f672c1713f437fa7a02cd413 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.2E-10 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 COP00_13425 f8da11d5f672c1713f437fa7a02cd413 311 Pfam PF03466 LysR substrate binding domain 90 306 1.7E-51 T 13-10-2018 IPR005119 LysR, substrate-binding COP00_13425 f8da11d5f672c1713f437fa7a02cd413 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 61 2.8E-19 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 COP00_13425 f8da11d5f672c1713f437fa7a02cd413 311 Gene3D G3DSA:1.10.10.10 1 92 3.1E-25 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_13425 f8da11d5f672c1713f437fa7a02cd413 311 Gene3D G3DSA:3.40.190.290 93 309 3.0E-53 T 13-10-2018 COP00_13425 f8da11d5f672c1713f437fa7a02cd413 311 SUPERFAMILY SSF46785 1 87 2.04E-21 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_03345 3055efb48fbbc092c4e946f0d0afbccc 58 TIGRFAM TIGR01669 phage_XkdX: phage uncharacterized protein, XkdX family 1 45 3.7E-11 T 13-10-2018 IPR010022 Protein of unknown function XkdX COP00_03345 3055efb48fbbc092c4e946f0d0afbccc 58 Pfam PF09693 Phage uncharacterised protein (Phage_XkdX) 7 45 2.4E-18 T 13-10-2018 IPR010022 Protein of unknown function XkdX COP00_23510 3055efb48fbbc092c4e946f0d0afbccc 58 TIGRFAM TIGR01669 phage_XkdX: phage uncharacterized protein, XkdX family 1 45 3.7E-11 T 13-10-2018 IPR010022 Protein of unknown function XkdX COP00_23510 3055efb48fbbc092c4e946f0d0afbccc 58 Pfam PF09693 Phage uncharacterised protein (Phage_XkdX) 7 45 2.4E-18 T 13-10-2018 IPR010022 Protein of unknown function XkdX COP00_19775 3055efb48fbbc092c4e946f0d0afbccc 58 TIGRFAM TIGR01669 phage_XkdX: phage uncharacterized protein, XkdX family 1 45 3.7E-11 T 13-10-2018 IPR010022 Protein of unknown function XkdX COP00_19775 3055efb48fbbc092c4e946f0d0afbccc 58 Pfam PF09693 Phage uncharacterised protein (Phage_XkdX) 7 45 2.4E-18 T 13-10-2018 IPR010022 Protein of unknown function XkdX COP00_12500 394f1fb73a451e687c5ba70f718d1ef5 450 ProSitePatterns PS00094 C-5 cytosine-specific DNA methylases active site. 167 179 - T 13-10-2018 IPR018117 DNA methylase, C-5 cytosine-specific, active site KEGG: 00270+2.1.1.37|Reactome: R-HSA-212300|Reactome: R-HSA-4655427|Reactome: R-HSA-5334118 COP00_12500 394f1fb73a451e687c5ba70f718d1ef5 450 Gene3D G3DSA:3.90.120.10 247 435 1.9E-92 T 13-10-2018 COP00_12500 394f1fb73a451e687c5ba70f718d1ef5 450 Gene3D G3DSA:3.40.50.150 108 442 1.9E-92 T 13-10-2018 COP00_12500 394f1fb73a451e687c5ba70f718d1ef5 450 TIGRFAM TIGR00675 dcm: DNA (cytosine-5-)-methyltransferase 107 443 2.6E-78 T 13-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 COP00_12500 394f1fb73a451e687c5ba70f718d1ef5 450 Pfam PF00145 C-5 cytosine-specific DNA methylase 106 444 5.5E-80 T 13-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 COP00_12500 394f1fb73a451e687c5ba70f718d1ef5 450 SUPERFAMILY SSF53335 105 448 4.56E-91 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase COP00_12500 394f1fb73a451e687c5ba70f718d1ef5 450 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 252 265 7.6E-14 T 13-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 COP00_12500 394f1fb73a451e687c5ba70f718d1ef5 450 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 106 122 7.6E-14 T 13-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 COP00_12500 394f1fb73a451e687c5ba70f718d1ef5 450 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 206 220 7.6E-14 T 13-10-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 COP00_16360 3153589fc6f8a53fd105f271022edb14 344 Pfam PF00069 Protein kinase domain 27 234 9.7E-15 T 13-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 COP00_16360 3153589fc6f8a53fd105f271022edb14 344 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 33 54 - T 13-10-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 COP00_16360 3153589fc6f8a53fd105f271022edb14 344 Gene3D G3DSA:1.10.510.10 110 260 2.8E-23 T 13-10-2018 COP00_16360 3153589fc6f8a53fd105f271022edb14 344 SUPERFAMILY SSF56112 18 234 1.08E-22 T 13-10-2018 IPR011009 Protein kinase-like domain superfamily COP00_16360 3153589fc6f8a53fd105f271022edb14 344 Gene3D G3DSA:3.30.200.20 9 109 2.8E-23 T 13-10-2018 COP00_16360 3153589fc6f8a53fd105f271022edb14 344 SMART SM00220 27 280 1.2E-7 T 13-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 COP00_04365 ffcb31f8d96ab6f86875d3c13d91b4c5 608 SUPERFAMILY SSF52540 358 601 6.27E-91 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_04365 ffcb31f8d96ab6f86875d3c13d91b4c5 608 Pfam PF00664 ABC transporter transmembrane region 42 319 2.4E-58 T 13-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 COP00_04365 ffcb31f8d96ab6f86875d3c13d91b4c5 608 SUPERFAMILY SSF90123 23 353 1.44E-87 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 COP00_04365 ffcb31f8d96ab6f86875d3c13d91b4c5 608 Gene3D G3DSA:1.20.1560.10 6 351 5.0E-108 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 COP00_04365 ffcb31f8d96ab6f86875d3c13d91b4c5 608 ProSitePatterns PS00211 ABC transporters family signature. 502 516 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 COP00_04365 ffcb31f8d96ab6f86875d3c13d91b4c5 608 Gene3D G3DSA:3.40.50.300 361 607 8.9E-89 T 13-10-2018 COP00_04365 ffcb31f8d96ab6f86875d3c13d91b4c5 608 Pfam PF00005 ABC transporter 382 530 5.5E-32 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 COP00_04365 ffcb31f8d96ab6f86875d3c13d91b4c5 608 SMART SM00382 390 576 3.2E-15 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_08190 b9cb2fc9a47e2509a0fa78444b187858 379 PIRSF PIRSF005572 1 379 7.0E-125 T 13-10-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-7250 COP00_08190 b9cb2fc9a47e2509a0fa78444b187858 379 Pfam PF00266 Aminotransferase class-V 4 366 3.1E-83 T 13-10-2018 IPR000192 Aminotransferase class V domain COP00_08190 b9cb2fc9a47e2509a0fa78444b187858 379 Gene3D G3DSA:3.40.640.10 61 235 5.4E-144 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 COP00_08190 b9cb2fc9a47e2509a0fa78444b187858 379 SUPERFAMILY SSF53383 3 377 1.26E-103 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase COP00_08190 b9cb2fc9a47e2509a0fa78444b187858 379 Gene3D G3DSA:1.10.260.50 15 278 5.4E-144 T 13-10-2018 COP00_08190 b9cb2fc9a47e2509a0fa78444b187858 379 Gene3D G3DSA:3.90.1150.10 4 371 5.4E-144 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 COP00_08190 b9cb2fc9a47e2509a0fa78444b187858 379 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 193 212 - T 13-10-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site COP00_03120 9d6f812872e96762838b091a80ff3812 421 Pfam PF06838 Methionine gamma-lyase 14 415 1.1E-210 T 13-10-2018 IPR009651 Putative methionine gamma-lyase COP00_03120 9d6f812872e96762838b091a80ff3812 421 Gene3D G3DSA:3.90.1150.60 18 412 5.0E-182 T 13-10-2018 COP00_03120 9d6f812872e96762838b091a80ff3812 421 Gene3D G3DSA:3.40.640.10 58 272 5.0E-182 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 COP00_03120 9d6f812872e96762838b091a80ff3812 421 SUPERFAMILY SSF53383 53 399 3.5E-49 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase COP00_12820 d607a3649f2df18d703479c0abfe76a1 317 SUPERFAMILY SSF142338 5 312 2.62E-109 T 13-10-2018 COP00_12820 d607a3649f2df18d703479c0abfe76a1 317 Hamap MF_00973 Gluconeogenesis factor. 3 317 37.063 T 13-10-2018 IPR010119 Gluconeogenesis factor COP00_12820 d607a3649f2df18d703479c0abfe76a1 317 Gene3D G3DSA:3.40.50.12300 2 316 7.0E-131 T 13-10-2018 IPR038136 Gluconeogenesis factor superfamily COP00_12820 d607a3649f2df18d703479c0abfe76a1 317 TIGRFAM TIGR01826 CofD_related: conserved hypothetical protein 7 315 3.4E-131 T 13-10-2018 IPR010119 Gluconeogenesis factor COP00_12820 d607a3649f2df18d703479c0abfe76a1 317 Pfam PF01933 Uncharacterised protein family UPF0052 7 292 2.2E-109 T 13-10-2018 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 COP00_06485 6938c8bc86058f66d5a1b13f773aab2e 300 TIGRFAM TIGR00147 TIGR00147: lipid kinase, YegS/Rv2252/BmrU family 4 294 1.0E-92 T 13-10-2018 IPR005218 Diacylglycerol/lipid kinase COP00_06485 6938c8bc86058f66d5a1b13f773aab2e 300 Gene3D G3DSA:2.60.200.40 126 279 2.7E-78 T 13-10-2018 COP00_06485 6938c8bc86058f66d5a1b13f773aab2e 300 SUPERFAMILY SSF111331 2 294 9.37E-68 T 13-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily COP00_06485 6938c8bc86058f66d5a1b13f773aab2e 300 Pfam PF00781 Diacylglycerol kinase catalytic domain 5 127 1.3E-30 T 13-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 COP00_06485 6938c8bc86058f66d5a1b13f773aab2e 300 SMART SM00046 5 132 5.2E-19 T 13-10-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 COP00_06485 6938c8bc86058f66d5a1b13f773aab2e 300 Gene3D G3DSA:3.40.50.10330 7 125 2.7E-78 T 13-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 COP00_21240 40b149c53d08745bde93ff8a19040783 145 Pfam PF01475 Ferric uptake regulator family 15 133 4.0E-40 T 13-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 COP00_21240 40b149c53d08745bde93ff8a19040783 145 Gene3D G3DSA:3.30.1490.190 88 145 9.5E-25 T 13-10-2018 COP00_21240 40b149c53d08745bde93ff8a19040783 145 SUPERFAMILY SSF46785 8 137 1.31E-41 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_21240 40b149c53d08745bde93ff8a19040783 145 Gene3D G3DSA:1.10.10.10 1 87 2.2E-34 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_01740 f6509ca497664d6e3d3a9ef127744169 265 Pfam PF13277 YmdB-like protein 4 255 3.5E-113 T 13-10-2018 IPR005235 Metallophosphoesterase, YmdB-like COP00_01740 f6509ca497664d6e3d3a9ef127744169 265 PIRSF PIRSF004789 1 264 7.8E-109 T 13-10-2018 IPR005235 Metallophosphoesterase, YmdB-like COP00_01740 f6509ca497664d6e3d3a9ef127744169 265 TIGRFAM TIGR00282 TIGR00282: metallophosphoesterase, MG_246/BB_0505 family 1 265 1.6E-121 T 13-10-2018 IPR005235 Metallophosphoesterase, YmdB-like COP00_01740 f6509ca497664d6e3d3a9ef127744169 265 Gene3D G3DSA:3.60.21.10 1 265 1.3E-118 T 13-10-2018 IPR029052 Metallo-dependent phosphatase-like COP00_01740 f6509ca497664d6e3d3a9ef127744169 265 SUPERFAMILY SSF56300 1 257 1.8E-90 T 13-10-2018 COP00_13300 2a869cac24cb0a25e0e361c7fd569e11 898 Gene3D G3DSA:1.10.530.10 750 885 1.1E-5 T 13-10-2018 COP00_13300 2a869cac24cb0a25e0e361c7fd569e11 898 Gene3D G3DSA:2.30.30.40 630 712 4.3E-11 T 13-10-2018 COP00_13300 2a869cac24cb0a25e0e361c7fd569e11 898 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 754 881 7.1E-11 T 13-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 COP00_13300 2a869cac24cb0a25e0e361c7fd569e11 898 SMART SM00287 648 718 6.2E-9 T 13-10-2018 IPR003646 SH3-like domain, bacterial-type COP00_13300 2a869cac24cb0a25e0e361c7fd569e11 898 Pfam PF08239 Bacterial SH3 domain 657 698 2.5E-8 T 13-10-2018 IPR003646 SH3-like domain, bacterial-type COP00_13300 2a869cac24cb0a25e0e361c7fd569e11 898 SMART SM00047 741 893 2.7E-54 T 13-10-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 COP00_20560 d27cf1e86325496d4648ea2a0d97abd9 235 Pfam PF13500 AAA domain 3 209 8.8E-48 T 13-10-2018 COP00_20560 d27cf1e86325496d4648ea2a0d97abd9 235 Gene3D G3DSA:3.40.50.300 1 224 5.9E-63 T 13-10-2018 COP00_20560 d27cf1e86325496d4648ea2a0d97abd9 235 SUPERFAMILY SSF52540 1 212 2.95E-56 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_20560 d27cf1e86325496d4648ea2a0d97abd9 235 PIRSF PIRSF006755 1 230 2.4E-74 T 13-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 COP00_20560 d27cf1e86325496d4648ea2a0d97abd9 235 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 1 210 29.733 T 13-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 COP00_20560 d27cf1e86325496d4648ea2a0d97abd9 235 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 5 172 3.1E-60 T 13-10-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 COP00_00835 e20d89ce423c538d0fdc7cb1e42d5d8f 488 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 1 484 36.064 T 13-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 COP00_00835 e20d89ce423c538d0fdc7cb1e42d5d8f 488 Pfam PF01225 Mur ligase family, catalytic domain 24 95 3.4E-14 T 13-10-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 COP00_00835 e20d89ce423c538d0fdc7cb1e42d5d8f 488 Gene3D G3DSA:3.40.1190.10 98 337 1.0E-88 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 COP00_00835 e20d89ce423c538d0fdc7cb1e42d5d8f 488 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 22 484 1.3E-173 T 13-10-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 COP00_00835 e20d89ce423c538d0fdc7cb1e42d5d8f 488 Gene3D G3DSA:3.40.1390.10 2 97 5.4E-30 T 13-10-2018 COP00_00835 e20d89ce423c538d0fdc7cb1e42d5d8f 488 Pfam PF02875 Mur ligase family, glutamate ligase domain 333 417 6.6E-24 T 13-10-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 COP00_00835 e20d89ce423c538d0fdc7cb1e42d5d8f 488 Gene3D G3DSA:3.90.190.20 338 488 6.7E-61 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 COP00_00835 e20d89ce423c538d0fdc7cb1e42d5d8f 488 Pfam PF08245 Mur ligase middle domain 107 312 7.7E-55 T 13-10-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 COP00_00835 e20d89ce423c538d0fdc7cb1e42d5d8f 488 SUPERFAMILY SSF53244 333 486 1.31E-47 T 13-10-2018 IPR036615 Mur ligase, C-terminal domain superfamily GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 COP00_00835 e20d89ce423c538d0fdc7cb1e42d5d8f 488 SUPERFAMILY SSF53623 98 332 2.62E-75 T 13-10-2018 IPR036565 Mur-like, catalytic domain superfamily GO:0005524|GO:0009058 Reactome: R-HSA-196757 COP00_00835 e20d89ce423c538d0fdc7cb1e42d5d8f 488 SUPERFAMILY SSF63418 3 98 2.88E-25 T 13-10-2018 IPR035911 MurE/MurF, N-terminal COP00_10300 ce1c9c08cdefaec72eb017cb5dfc32bb 327 PRINTS PR00169 Potassium channel signature 42 64 2.7E-5 T 13-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 COP00_10300 ce1c9c08cdefaec72eb017cb5dfc32bb 327 PRINTS PR00169 Potassium channel signature 71 97 2.7E-5 T 13-10-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 COP00_10300 ce1c9c08cdefaec72eb017cb5dfc32bb 327 Gene3D G3DSA:3.40.50.720 110 251 2.7E-25 T 13-10-2018 COP00_10300 ce1c9c08cdefaec72eb017cb5dfc32bb 327 SUPERFAMILY SSF51735 115 248 1.97E-17 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily COP00_10300 ce1c9c08cdefaec72eb017cb5dfc32bb 327 Pfam PF07885 Ion channel 22 96 5.5E-16 T 13-10-2018 IPR013099 Potassium channel domain COP00_10300 ce1c9c08cdefaec72eb017cb5dfc32bb 327 Pfam PF02254 TrkA-N domain 118 238 3.1E-16 T 13-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 COP00_10300 ce1c9c08cdefaec72eb017cb5dfc32bb 327 Gene3D G3DSA:1.10.287.70 7 101 3.2E-20 T 13-10-2018 COP00_10300 ce1c9c08cdefaec72eb017cb5dfc32bb 327 SUPERFAMILY SSF81324 12 135 3.66E-25 T 13-10-2018 COP00_12875 5998ae71ad267b309d7c772c165c3c30 210 Pfam PF01634 ATP phosphoribosyltransferase 54 203 5.4E-49 T 13-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 COP00_12875 5998ae71ad267b309d7c772c165c3c30 210 Gene3D G3DSA:3.40.190.10 6 199 2.7E-79 T 13-10-2018 COP00_12875 5998ae71ad267b309d7c772c165c3c30 210 SUPERFAMILY SSF53850 3 204 4.56E-64 T 13-10-2018 COP00_12875 5998ae71ad267b309d7c772c165c3c30 210 Gene3D G3DSA:3.40.190.10 95 176 2.7E-79 T 13-10-2018 COP00_12875 5998ae71ad267b309d7c772c165c3c30 210 Hamap MF_01018 ATP phosphoribosyltransferase [hisG]. 4 208 56.825 T 13-10-2018 IPR024893 ATP phosphoribosyltransferase HisG, short form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17 COP00_12875 5998ae71ad267b309d7c772c165c3c30 210 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 5 184 2.4E-60 T 13-10-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 COP00_12875 5998ae71ad267b309d7c772c165c3c30 210 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 143 164 - T 13-10-2018 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17 COP00_11560 720cb28e4809d32bb89ab1a9b1223174 383 TIGRFAM TIGR03404 bicupin_oxalic: bicupin, oxalate decarboxylase family 14 379 1.2E-179 T 13-10-2018 IPR017774 Bicupin, oxalate decarboxylase/oxidase GO:0033609 KEGG: 00630+4.1.1.2|MetaCyc: PWY-6698 COP00_11560 720cb28e4809d32bb89ab1a9b1223174 383 SUPERFAMILY SSF51182 17 378 6.19E-104 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily COP00_11560 720cb28e4809d32bb89ab1a9b1223174 383 Pfam PF00190 Cupin 61 190 2.2E-23 T 13-10-2018 IPR006045 Cupin 1 GO:0045735 COP00_11560 720cb28e4809d32bb89ab1a9b1223174 383 Pfam PF00190 Cupin 228 358 4.1E-24 T 13-10-2018 IPR006045 Cupin 1 GO:0045735 COP00_11560 720cb28e4809d32bb89ab1a9b1223174 383 Gene3D G3DSA:2.60.120.10 56 229 2.9E-173 T 13-10-2018 IPR014710 RmlC-like jelly roll fold COP00_11560 720cb28e4809d32bb89ab1a9b1223174 383 Gene3D G3DSA:2.60.120.10 8 372 2.9E-173 T 13-10-2018 IPR014710 RmlC-like jelly roll fold COP00_11560 720cb28e4809d32bb89ab1a9b1223174 383 SMART SM00835 228 369 2.6E-30 T 13-10-2018 IPR006045 Cupin 1 GO:0045735 COP00_11560 720cb28e4809d32bb89ab1a9b1223174 383 SMART SM00835 53 192 1.4E-17 T 13-10-2018 IPR006045 Cupin 1 GO:0045735 COP00_04420 5850d8ababa1001624db3fc382d1c8ed 367 PIRSF PIRSF006060 1 355 1.8E-12 T 13-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 COP00_04420 5850d8ababa1001624db3fc382d1c8ed 367 Pfam PF03845 Spore germination protein 8 330 8.7E-107 T 13-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 COP00_04420 5850d8ababa1001624db3fc382d1c8ed 367 TIGRFAM TIGR00912 2A0309: spore germination protein (amino acid permease) 8 363 1.1E-83 T 13-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 COP00_04420 5850d8ababa1001624db3fc382d1c8ed 367 Gene3D G3DSA:1.20.1740.10 5 362 8.8E-15 T 13-10-2018 COP00_18870 29ab4f73c89840c18968b800c9d48c57 277 Gene3D G3DSA:3.40.50.720 3 262 1.6E-51 T 13-10-2018 COP00_18870 29ab4f73c89840c18968b800c9d48c57 277 Pfam PF00106 short chain dehydrogenase 7 206 9.3E-28 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_18870 29ab4f73c89840c18968b800c9d48c57 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 91 102 5.1E-18 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_18870 29ab4f73c89840c18968b800c9d48c57 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 189 206 5.1E-18 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_18870 29ab4f73c89840c18968b800c9d48c57 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 5.1E-18 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_18870 29ab4f73c89840c18968b800c9d48c57 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 187 5.1E-18 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_18870 29ab4f73c89840c18968b800c9d48c57 277 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 222 242 5.1E-18 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_18870 29ab4f73c89840c18968b800c9d48c57 277 SUPERFAMILY SSF51735 3 244 1.57E-44 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily COP00_21645 5d3d6d17129e4610d77f2e8d6f1a43d5 512 SUPERFAMILY SSF56317 228 495 2.22E-59 T 13-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily COP00_21645 5d3d6d17129e4610d77f2e8d6f1a43d5 512 Pfam PF00583 Acetyltransferase (GNAT) family 25 145 1.4E-12 T 13-10-2018 IPR000182 GNAT domain COP00_21645 5d3d6d17129e4610d77f2e8d6f1a43d5 512 Pfam PF00795 Carbon-nitrogen hydrolase 232 490 1.1E-29 T 13-10-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807 COP00_21645 5d3d6d17129e4610d77f2e8d6f1a43d5 512 SUPERFAMILY SSF55729 16 144 9.29E-18 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase COP00_21645 5d3d6d17129e4610d77f2e8d6f1a43d5 512 Gene3D G3DSA:3.40.630.30 7 224 3.3E-62 T 13-10-2018 COP00_21645 5d3d6d17129e4610d77f2e8d6f1a43d5 512 Gene3D G3DSA:3.60.110.10 227 512 3.0E-58 T 13-10-2018 IPR036526 Carbon-nitrogen hydrolase superfamily COP00_21645 5d3d6d17129e4610d77f2e8d6f1a43d5 512 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 374 394 - T 13-10-2018 IPR001110 Uncharacterised protein family UPF0012, conserved site COP00_04680 7849c0497d9d71b91c7c5fde676126ca 288 Pfam PF05368 NmrA-like family 4 218 2.4E-19 T 13-10-2018 IPR008030 NmrA-like domain Reactome: R-HSA-70635 COP00_04680 7849c0497d9d71b91c7c5fde676126ca 288 Gene3D G3DSA:3.90.25.10 139 269 2.5E-87 T 13-10-2018 COP00_04680 7849c0497d9d71b91c7c5fde676126ca 288 Gene3D G3DSA:3.40.50.720 4 268 2.5E-87 T 13-10-2018 COP00_04680 7849c0497d9d71b91c7c5fde676126ca 288 SUPERFAMILY SSF51735 4 252 2.51E-57 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily COP00_09250 2bf18ccebec3f39aadd7ad712c724f9b 529 Pfam PF00501 AMP-binding enzyme 22 424 2.8E-81 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 COP00_09250 2bf18ccebec3f39aadd7ad712c724f9b 529 ProSitePatterns PS00455 Putative AMP-binding domain signature. 176 187 - T 13-10-2018 IPR020845 AMP-binding, conserved site COP00_09250 2bf18ccebec3f39aadd7ad712c724f9b 529 Gene3D G3DSA:3.30.300.310 420 524 7.7E-29 T 13-10-2018 COP00_09250 2bf18ccebec3f39aadd7ad712c724f9b 529 Pfam PF13193 AMP-binding enzyme C-terminal domain 433 510 4.9E-22 T 13-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain COP00_09250 2bf18ccebec3f39aadd7ad712c724f9b 529 Gene3D G3DSA:3.40.50.12780 3 417 1.9E-112 T 13-10-2018 COP00_09250 2bf18ccebec3f39aadd7ad712c724f9b 529 SUPERFAMILY SSF56801 22 522 1.44E-139 T 13-10-2018 COP00_16315 674bf275eeb7e5b5d3665ce03884360f 87 Gene3D G3DSA:3.10.290.10 1 85 1.3E-25 T 13-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 COP00_16315 674bf275eeb7e5b5d3665ce03884360f 87 Pfam PF01479 S4 domain 1 47 1.4E-11 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 COP00_16315 674bf275eeb7e5b5d3665ce03884360f 87 SUPERFAMILY SSF55174 1 77 2.88E-21 T 13-10-2018 COP00_16315 674bf275eeb7e5b5d3665ce03884360f 87 SMART SM00363 1 64 5.2E-11 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 COP00_16315 674bf275eeb7e5b5d3665ce03884360f 87 PIRSF PIRSF038881 1 87 3.1E-35 T 13-10-2018 IPR025490 RNA-binding protein, HP1423 type COP00_07290 4dd6447672a37c2a3bbb0c189a579b80 179 SUPERFAMILY SSF55729 7 167 5.93E-27 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase COP00_07290 4dd6447672a37c2a3bbb0c189a579b80 179 Pfam PF08445 FR47-like protein 88 150 1.0E-11 T 13-10-2018 IPR013653 FR47-like GO:0016747 COP00_07290 4dd6447672a37c2a3bbb0c189a579b80 179 Gene3D G3DSA:3.40.630.30 6 172 8.1E-40 T 13-10-2018 COP00_06355 d13a76782a8ca0020bf7b8892a1ec7f9 273 SUPERFAMILY SSF51735 2 159 7.32E-33 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily COP00_06355 d13a76782a8ca0020bf7b8892a1ec7f9 273 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 162 264 1.6E-32 T 13-10-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 COP00_06355 d13a76782a8ca0020bf7b8892a1ec7f9 273 SUPERFAMILY SSF48179 161 268 1.09E-29 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 COP00_06355 d13a76782a8ca0020bf7b8892a1ec7f9 273 Gene3D G3DSA:3.40.50.720 1 164 4.6E-51 T 13-10-2018 COP00_06355 d13a76782a8ca0020bf7b8892a1ec7f9 273 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 2 265 25.736 T 13-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 COP00_06355 d13a76782a8ca0020bf7b8892a1ec7f9 273 Gene3D G3DSA:1.10.3730.10 165 270 2.2E-35 T 13-10-2018 COP00_06355 d13a76782a8ca0020bf7b8892a1ec7f9 273 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 4 99 3.0E-23 T 13-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal COP00_06355 d13a76782a8ca0020bf7b8892a1ec7f9 273 PIRSF PIRSF000193 1 268 1.8E-79 T 13-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 COP00_06355 d13a76782a8ca0020bf7b8892a1ec7f9 273 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 4 265 5.2E-83 T 13-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 COP00_23120 d115e4ef97c00aa3bcf52172ce04fbdf 131 Pfam PF13027 Protein of unknown function (DUF3888) 49 129 1.7E-7 T 13-10-2018 IPR024984 Protein of unknown function DUF3888 COP00_10350 96ed0e655dd92ce5b6fd45b61355677f 84 Pfam PF08958 Domain of unknown function (DUF1871) 9 84 1.5E-36 T 13-10-2018 IPR015053 Protein of unknown function DUF1871 COP00_10350 96ed0e655dd92ce5b6fd45b61355677f 84 ProDom PD062625 YUGE 9 84 1.0E-31 T 13-10-2018 IPR015053 Protein of unknown function DUF1871 COP00_10350 96ed0e655dd92ce5b6fd45b61355677f 84 SUPERFAMILY SSF116922 5 82 3.79E-27 T 13-10-2018 IPR023162 Apc36109-like domain superfamily COP00_10350 96ed0e655dd92ce5b6fd45b61355677f 84 Gene3D G3DSA:1.10.340.20 1 84 1.0E-29 T 13-10-2018 IPR023162 Apc36109-like domain superfamily COP00_08805 20e695670b2eea826594efa2c20df4dd 173 Gene3D G3DSA:1.10.357.10 1 169 3.0E-28 T 13-10-2018 COP00_08805 20e695670b2eea826594efa2c20df4dd 173 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 34 57 8.6E-10 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 COP00_08805 20e695670b2eea826594efa2c20df4dd 173 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 8.6E-10 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 COP00_08805 20e695670b2eea826594efa2c20df4dd 173 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 59 1.0E-15 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 COP00_08805 20e695670b2eea826594efa2c20df4dd 173 SUPERFAMILY SSF46689 3 84 1.85E-20 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 COP00_24050 51a5845b1e0602ae12aa58a654fd76b0 211 Pfam PF09335 SNARE associated Golgi protein 32 157 2.6E-22 T 13-10-2018 IPR032816 SNARE associated Golgi protein COP00_22805 20e6a8f2f4a233b98d880185f7909d88 324 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 235 299 1.7E-22 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 COP00_22805 20e6a8f2f4a233b98d880185f7909d88 324 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 233 319 6.6E-29 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 COP00_22805 20e6a8f2f4a233b98d880185f7909d88 324 SUPERFAMILY SSF52540 4 254 7.69E-71 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_22805 20e6a8f2f4a233b98d880185f7909d88 324 Pfam PF00005 ABC transporter 25 183 1.3E-28 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 COP00_22805 20e6a8f2f4a233b98d880185f7909d88 324 Gene3D G3DSA:3.40.50.300 1 324 1.0E-101 T 13-10-2018 COP00_22805 20e6a8f2f4a233b98d880185f7909d88 324 ProSitePatterns PS00211 ABC transporters family signature. 156 170 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 COP00_22805 20e6a8f2f4a233b98d880185f7909d88 324 SMART SM00382 33 234 4.2E-13 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_13850 b738fd622f1c2a4065c46d024588916f 415 Gene3D G3DSA:3.90.1150.10 7 389 2.8E-190 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 COP00_13850 b738fd622f1c2a4065c46d024588916f 415 SUPERFAMILY SSF53383 2 411 4.17E-184 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase COP00_13850 b738fd622f1c2a4065c46d024588916f 415 Gene3D G3DSA:3.40.640.10 33 283 2.8E-190 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 COP00_13850 b738fd622f1c2a4065c46d024588916f 415 PIRSF PIRSF000412 1 409 6.9E-175 T 13-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 COP00_13850 b738fd622f1c2a4065c46d024588916f 415 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 218 234 - T 13-10-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 COP00_13850 b738fd622f1c2a4065c46d024588916f 415 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 3 411 53.836 T 13-10-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0019264|GO:0030170|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 COP00_13850 b738fd622f1c2a4065c46d024588916f 415 Pfam PF00464 Serine hydroxymethyltransferase 5 380 8.8E-185 T 13-10-2018 IPR039429 Serine hydroxymethyltransferase-like domain KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 COP00_13145 83d0d223582182bd43faf59bbf49e720 212 TIGRFAM TIGR00257 IMPACT_YIGZ: uncharacterized protein, YigZ family 1 197 5.7E-84 T 13-10-2018 IPR015796 Impact family, bacterial/archaeal COP00_13145 83d0d223582182bd43faf59bbf49e720 212 Gene3D G3DSA:3.30.230.30 1 133 6.4E-53 T 13-10-2018 IPR036956 Impact, N-terminal domain superfamily COP00_13145 83d0d223582182bd43faf59bbf49e720 212 Pfam PF09186 Domain of unknown function (DUF1949) 141 195 2.5E-19 T 13-10-2018 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal COP00_13145 83d0d223582182bd43faf59bbf49e720 212 Pfam PF01205 Uncharacterized protein family UPF0029 20 123 4.4E-33 T 13-10-2018 IPR001498 Impact, N-terminal COP00_13145 83d0d223582182bd43faf59bbf49e720 212 SUPERFAMILY SSF54211 2 131 6.45E-45 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold COP00_13145 83d0d223582182bd43faf59bbf49e720 212 SUPERFAMILY SSF54980 135 197 1.44E-10 T 13-10-2018 IPR035647 EF-G domain III/V-like COP00_13145 83d0d223582182bd43faf59bbf49e720 212 ProSitePatterns PS00910 Uncharacterized protein family UPF0029 signature. 79 108 - T 13-10-2018 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site COP00_12545 894f8e031b23d3fdd6b6e1dc5a120441 323 PIRSF PIRSF000355 1 318 8.0E-90 T 13-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 COP00_12545 894f8e031b23d3fdd6b6e1dc5a120441 323 Gene3D G3DSA:1.10.620.20 2 292 7.9E-108 T 13-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 COP00_12545 894f8e031b23d3fdd6b6e1dc5a120441 323 ProSitePatterns PS00368 Ribonucleotide reductase small subunit signature. 95 112 - T 13-10-2018 IPR030475 Ribonucleotide reductase small subunit, acitve site KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 COP00_12545 894f8e031b23d3fdd6b6e1dc5a120441 323 Pfam PF00268 Ribonucleotide reductase, small chain 7 283 9.0E-80 T 13-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 COP00_12545 894f8e031b23d3fdd6b6e1dc5a120441 323 TIGRFAM TIGR04171 RNR_1b_NrdF: ribonucleoside-diphosphate reductase, class 1b, beta subunit 4 321 4.5E-142 T 13-10-2018 IPR026494 Ribonucleoside reductase subunit beta, NrdF GO:0005971|GO:0009263 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 COP00_12545 894f8e031b23d3fdd6b6e1dc5a120441 323 SUPERFAMILY SSF47240 4 321 2.35E-89 T 13-10-2018 IPR009078 Ferritin-like superfamily COP00_08225 931c627d2ddeb30bee2e3cb29349ebc8 424 PIRSF PIRSF001549 1 422 7.6E-121 T 13-10-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 COP00_08225 931c627d2ddeb30bee2e3cb29349ebc8 424 Pfam PF13393 Histidyl-tRNA synthetase 8 313 1.7E-49 T 13-10-2018 COP00_08225 931c627d2ddeb30bee2e3cb29349ebc8 424 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 5 410 5.5E-159 T 13-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 COP00_08225 931c627d2ddeb30bee2e3cb29349ebc8 424 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 1 420 34.292 T 13-10-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 COP00_08225 931c627d2ddeb30bee2e3cb29349ebc8 424 SUPERFAMILY SSF52954 330 419 4.98E-24 T 13-10-2018 COP00_08225 931c627d2ddeb30bee2e3cb29349ebc8 424 SUPERFAMILY SSF55681 4 317 5.17E-97 T 13-10-2018 COP00_08225 931c627d2ddeb30bee2e3cb29349ebc8 424 Gene3D G3DSA:3.30.930.10 2 324 1.8E-118 T 13-10-2018 COP00_08225 931c627d2ddeb30bee2e3cb29349ebc8 424 Gene3D G3DSA:3.40.50.800 328 417 3.3E-26 T 13-10-2018 IPR036621 Anticodon-binding domain superfamily COP00_08225 931c627d2ddeb30bee2e3cb29349ebc8 424 Pfam PF03129 Anticodon binding domain 331 420 2.8E-17 T 13-10-2018 IPR004154 Anticodon-binding COP00_09505 f1da040d92ba01be2873ac4c944d4347 424 Gene3D G3DSA:3.50.50.60 7 408 1.3E-124 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily COP00_09505 f1da040d92ba01be2873ac4c944d4347 424 SUPERFAMILY SSF160996 194 360 1.57E-47 T 13-10-2018 COP00_09505 f1da040d92ba01be2873ac4c944d4347 424 Pfam PF03486 HI0933-like protein 4 412 1.8E-158 T 13-10-2018 COP00_09505 f1da040d92ba01be2873ac4c944d4347 424 Gene3D G3DSA:1.10.8.260 278 342 1.3E-124 T 13-10-2018 IPR023166 HI0933-like insert domain superfamily COP00_09505 f1da040d92ba01be2873ac4c944d4347 424 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 160 169 8.3E-9 T 13-10-2018 COP00_09505 f1da040d92ba01be2873ac4c944d4347 424 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 8.3E-9 T 13-10-2018 COP00_09505 f1da040d92ba01be2873ac4c944d4347 424 SUPERFAMILY SSF51905 2 416 1.67E-64 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily COP00_09505 f1da040d92ba01be2873ac4c944d4347 424 Gene3D G3DSA:2.40.30.10 193 359 1.3E-124 T 13-10-2018 COP00_09505 f1da040d92ba01be2873ac4c944d4347 424 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 6 411 6.5E-148 T 13-10-2018 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like COP00_21190 9f41082e7869eae27276a532686f2a40 176 Hamap MF_01568 UPF0374 protein . 1 175 49.812 T 13-10-2018 IPR016882 Uncharacterised protein family UPF0374 COP00_21190 9f41082e7869eae27276a532686f2a40 176 Pfam PF04167 Protein of unknown function (DUF402) 60 124 2.7E-18 T 13-10-2018 IPR007295 Domain of unknown function DUF402 COP00_21190 9f41082e7869eae27276a532686f2a40 176 Gene3D G3DSA:2.40.380.10 40 169 1.9E-11 T 13-10-2018 IPR035930 FomD-like superfamily COP00_21190 9f41082e7869eae27276a532686f2a40 176 PIRSF PIRSF028345 1 176 1.6E-80 T 13-10-2018 IPR016882 Uncharacterised protein family UPF0374 COP00_21190 9f41082e7869eae27276a532686f2a40 176 SUPERFAMILY SSF159234 3 171 1.05E-33 T 13-10-2018 IPR035930 FomD-like superfamily COP00_04705 2ed989d04789e34f092f3ee4dcc17d78 276 Gene3D G3DSA:2.160.20.100 160 263 2.9E-18 T 13-10-2018 COP00_04705 2ed989d04789e34f092f3ee4dcc17d78 276 SUPERFAMILY SSF141571 53 266 2.09E-22 T 13-10-2018 COP00_04705 2ed989d04789e34f092f3ee4dcc17d78 276 Pfam PF00805 Pentapeptide repeats (8 copies) 213 243 4.0E-9 T 13-10-2018 IPR001646 Pentapeptide repeat COP00_22550 dc25d5bf0e65e119789a07a350c06d7a 188 Pfam PF10949 Protein of unknown function (DUF2777) 4 180 2.3E-58 T 13-10-2018 IPR024488 Protein of unknown function DUF2777 COP00_22550 dc25d5bf0e65e119789a07a350c06d7a 188 ProDom PD106196 YISN IG BH1722 4 179 9.0E-72 T 13-10-2018 IPR024488 Protein of unknown function DUF2777 COP00_07860 93b7ff12049eba3599001e870f945b2c 266 Pfam PF03609 PTS system sorbose-specific iic component 4 234 8.1E-70 T 13-10-2018 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit GO:0009401|GO:0016021 COP00_07860 93b7ff12049eba3599001e870f945b2c 266 TIGRFAM TIGR00822 EII-Sor: PTS system, mannose/fructose/sorbose family, IIC component 1 263 9.7E-124 T 13-10-2018 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit GO:0009401|GO:0016021 COP00_13345 08fb88b87cd83b04294e3662e6d33c93 254 TIGRFAM TIGR01832 kduD: 2-deoxy-D-gluconate 3-dehydrogenase 8 254 6.5E-115 T 13-10-2018 IPR011286 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase GO:0008678|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.127|MetaCyc: PWY-6507|MetaCyc: PWY-7562 COP00_13345 08fb88b87cd83b04294e3662e6d33c93 254 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 22 251 1.8E-61 T 13-10-2018 COP00_13345 08fb88b87cd83b04294e3662e6d33c93 254 SUPERFAMILY SSF51735 7 253 1.09E-77 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily COP00_13345 08fb88b87cd83b04294e3662e6d33c93 254 Gene3D G3DSA:3.40.50.720 6 254 1.1E-78 T 13-10-2018 COP00_13345 08fb88b87cd83b04294e3662e6d33c93 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 235 7.4E-41 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_13345 08fb88b87cd83b04294e3662e6d33c93 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 86 97 7.4E-41 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_13345 08fb88b87cd83b04294e3662e6d33c93 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 7.4E-41 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_13345 08fb88b87cd83b04294e3662e6d33c93 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 133 149 7.4E-41 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_13345 08fb88b87cd83b04294e3662e6d33c93 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 7.4E-41 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_13345 08fb88b87cd83b04294e3662e6d33c93 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 14 31 7.4E-41 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_13345 08fb88b87cd83b04294e3662e6d33c93 254 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 146 174 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 COP00_13345 08fb88b87cd83b04294e3662e6d33c93 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 159 178 2.4E-12 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_13345 08fb88b87cd83b04294e3662e6d33c93 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 86 97 2.4E-12 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_13345 08fb88b87cd83b04294e3662e6d33c93 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 139 147 2.4E-12 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_12145 90fdd9ba562d2e854574f2ec2845a268 343 SUPERFAMILY SSF53448 4 223 1.93E-57 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases COP00_12145 90fdd9ba562d2e854574f2ec2845a268 343 Pfam PF00535 Glycosyl transferase family 2 7 135 3.1E-35 T 13-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 COP00_12145 90fdd9ba562d2e854574f2ec2845a268 343 Gene3D G3DSA:3.90.550.10 1 245 3.6E-57 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases COP00_05635 3c9851d25c9356ea4074d3da0acbdb32 218 Gene3D G3DSA:3.20.20.70 6 206 2.0E-46 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 COP00_05635 3c9851d25c9356ea4074d3da0acbdb32 218 SUPERFAMILY SSF51366 6 207 9.73E-42 T 13-10-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824 COP00_05635 3c9851d25c9356ea4074d3da0acbdb32 218 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 7 206 2.1E-40 T 13-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 COP00_05635 3c9851d25c9356ea4074d3da0acbdb32 218 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 4 213 31.507 T 13-10-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 COP00_02530 fbf8ec50bd04dae475531c2558cb4714 61 Gene3D G3DSA:1.10.101.10 14 46 3.3E-7 T 13-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 COP00_02530 fbf8ec50bd04dae475531c2558cb4714 61 SUPERFAMILY SSF47090 18 42 1.8E-6 T 13-10-2018 IPR036365 PGBD-like superfamily COP00_02530 fbf8ec50bd04dae475531c2558cb4714 61 Pfam PF01471 Putative peptidoglycan binding domain 17 42 5.7E-7 T 13-10-2018 IPR002477 Peptidoglycan binding-like COP00_21605 3a8efc32c046f194d33bbaee8db1983e 384 SUPERFAMILY SSF52540 1 240 1.73E-78 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_21605 3a8efc32c046f194d33bbaee8db1983e 384 Gene3D G3DSA:3.10.580.10 247 372 8.2E-36 T 13-10-2018 COP00_21605 3a8efc32c046f194d33bbaee8db1983e 384 Pfam PF00005 ABC transporter 19 163 8.5E-34 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 COP00_21605 3a8efc32c046f194d33bbaee8db1983e 384 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 COP00_21605 3a8efc32c046f194d33bbaee8db1983e 384 Pfam PF00571 CBS domain 311 364 1.5E-8 T 13-10-2018 IPR000644 CBS domain COP00_21605 3a8efc32c046f194d33bbaee8db1983e 384 Pfam PF00571 CBS domain 251 297 2.5E-10 T 13-10-2018 IPR000644 CBS domain COP00_21605 3a8efc32c046f194d33bbaee8db1983e 384 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 13 371 7.4E-174 T 13-10-2018 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 COP00_21605 3a8efc32c046f194d33bbaee8db1983e 384 Gene3D G3DSA:3.40.50.300 1 240 8.8E-75 T 13-10-2018 COP00_21605 3a8efc32c046f194d33bbaee8db1983e 384 SMART SM00116 258 306 8.2E-9 T 13-10-2018 IPR000644 CBS domain COP00_21605 3a8efc32c046f194d33bbaee8db1983e 384 SMART SM00116 318 366 4.8E-8 T 13-10-2018 IPR000644 CBS domain COP00_21605 3a8efc32c046f194d33bbaee8db1983e 384 SMART SM00382 27 213 3.8E-22 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_21605 3a8efc32c046f194d33bbaee8db1983e 384 SUPERFAMILY SSF54631 250 374 7.91E-27 T 13-10-2018 COP00_22615 f4ffab000b4496bf00ff88935f5ef7c9 502 SUPERFAMILY SSF53383 22 492 1.28E-119 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase COP00_22615 f4ffab000b4496bf00ff88935f5ef7c9 502 Gene3D G3DSA:3.40.640.10 119 371 1.8E-131 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 COP00_22615 f4ffab000b4496bf00ff88935f5ef7c9 502 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 62 428 1.3E-59 T 13-10-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 COP00_22615 f4ffab000b4496bf00ff88935f5ef7c9 502 ProSitePatterns PS00392 DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 311 332 - T 13-10-2018 IPR021115 Pyridoxal-phosphate binding site GO:0016831 COP00_22615 f4ffab000b4496bf00ff88935f5ef7c9 502 Gene3D G3DSA:3.90.1150.170 63 489 1.8E-131 T 13-10-2018 COP00_19470 a13ce1dc65b3ad12b3260ea7a95f1b1c 230 SUPERFAMILY SSF53067 108 215 4.92E-17 T 13-10-2018 COP00_19470 a13ce1dc65b3ad12b3260ea7a95f1b1c 230 SUPERFAMILY SSF53067 1 102 3.19E-29 T 13-10-2018 COP00_19470 a13ce1dc65b3ad12b3260ea7a95f1b1c 230 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 4 217 2.5E-57 T 13-10-2018 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB GO:0002949 COP00_19470 a13ce1dc65b3ad12b3260ea7a95f1b1c 230 Gene3D G3DSA:3.30.420.40 95 190 1.3E-53 T 13-10-2018 COP00_19470 a13ce1dc65b3ad12b3260ea7a95f1b1c 230 Pfam PF00814 Glycoprotease family 32 200 3.4E-34 T 13-10-2018 IPR000905 Gcp-like domain COP00_19470 a13ce1dc65b3ad12b3260ea7a95f1b1c 230 Gene3D G3DSA:3.30.420.40 4 217 1.3E-53 T 13-10-2018 COP00_15900 a2fb2872f8fbe66287a85660f239d3e4 239 PIRSF PIRSF003078 2 220 2.1E-56 T 13-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 COP00_15900 a2fb2872f8fbe66287a85660f239d3e4 239 SUPERFAMILY SSF53335 1 237 2.44E-49 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase COP00_15900 a2fb2872f8fbe66287a85660f239d3e4 239 Pfam PF02527 rRNA small subunit methyltransferase G 21 204 7.9E-60 T 13-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 COP00_15900 a2fb2872f8fbe66287a85660f239d3e4 239 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 25 217 3.9E-52 T 13-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 COP00_15900 a2fb2872f8fbe66287a85660f239d3e4 239 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 14 214 28.141 T 13-10-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 COP00_15900 a2fb2872f8fbe66287a85660f239d3e4 239 Gene3D G3DSA:3.40.50.150 1 239 1.6E-87 T 13-10-2018 COP00_22220 e2993ebfd688a5534bfa20792eb6b02f 469 Gene3D G3DSA:1.10.3110.10 110 203 7.8E-150 T 13-10-2018 COP00_22220 e2993ebfd688a5534bfa20792eb6b02f 469 SUPERFAMILY SSF54373 307 414 1.01E-33 T 13-10-2018 COP00_22220 e2993ebfd688a5534bfa20792eb6b02f 469 SUPERFAMILY SSF51905 6 463 2.27E-48 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily COP00_22220 e2993ebfd688a5534bfa20792eb6b02f 469 Pfam PF01593 Flavin containing amine oxidoreductase 15 464 7.7E-67 T 13-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 COP00_22220 e2993ebfd688a5534bfa20792eb6b02f 469 Gene3D G3DSA:3.50.50.60 9 455 7.8E-150 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily COP00_22220 e2993ebfd688a5534bfa20792eb6b02f 469 Gene3D G3DSA:3.90.660.20 44 413 7.8E-150 T 13-10-2018 COP00_22220 e2993ebfd688a5534bfa20792eb6b02f 469 TIGRFAM TIGR00562 proto_IX_ox: protoporphyrinogen oxidase 5 468 3.8E-163 T 13-10-2018 IPR004572 Protoporphyrinogen oxidase GO:0004729|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.4|MetaCyc: PWY-7159|Reactome: R-HSA-189451 COP00_06705 3fde3b109401c66dfee0dec56a602a65 142 Gene3D G3DSA:1.10.10.10 1 73 1.2E-26 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_06705 3fde3b109401c66dfee0dec56a602a65 142 Pfam PF01325 Iron dependent repressor, N-terminal DNA binding domain 1 60 8.0E-27 T 13-10-2018 IPR022687 DTXR-type HTH domain GO:0003677 COP00_06705 3fde3b109401c66dfee0dec56a602a65 142 SMART SM00529 24 123 3.5E-46 T 13-10-2018 IPR022689 Iron dependent repressor GO:0003700|GO:0006355|GO:0046914 COP00_06705 3fde3b109401c66dfee0dec56a602a65 142 Gene3D G3DSA:1.10.60.10 74 142 5.1E-34 T 13-10-2018 IPR036421 Iron dependent repressor, metal binding and dimerisation domain superfamily GO:0046914|GO:0046983 COP00_06705 3fde3b109401c66dfee0dec56a602a65 142 SUPERFAMILY SSF46785 3 62 2.78E-17 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_06705 3fde3b109401c66dfee0dec56a602a65 142 Hamap MF_00732 Transcriptional regulator MntR [mntR]. 1 139 45.394 T 13-10-2018 IPR022897 HTH-type transcription regulator MntR COP00_06705 3fde3b109401c66dfee0dec56a602a65 142 Pfam PF02742 Iron dependent repressor, metal binding and dimerisation domain 63 123 5.0E-19 T 13-10-2018 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 COP00_06705 3fde3b109401c66dfee0dec56a602a65 142 SUPERFAMILY SSF47979 63 123 1.06E-18 T 13-10-2018 IPR036421 Iron dependent repressor, metal binding and dimerisation domain superfamily GO:0046914|GO:0046983 COP00_18540 6f666ed19fc4b89c9c7d7f5e984e44e9 403 Pfam PF05504 Spore germination B3/ GerAC like, C-terminal 228 392 2.7E-40 T 13-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 COP00_18540 6f666ed19fc4b89c9c7d7f5e984e44e9 403 Gene3D G3DSA:3.30.300.210 243 395 1.7E-39 T 13-10-2018 IPR038501 Spore germination GerAC superfamily COP00_18540 6f666ed19fc4b89c9c7d7f5e984e44e9 403 TIGRFAM TIGR02887 spore_ger_x_C: germination protein, Ger(x)C family 5 394 6.0E-107 T 13-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 COP00_10785 6b6b07d5183f492d0dfc53cffe72526f 166 Pfam PF04608 Phosphatidylglycerophosphatase A 23 159 1.7E-15 T 13-10-2018 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 COP00_10785 6b6b07d5183f492d0dfc53cffe72526f 166 SUPERFAMILY SSF101307 11 162 4.19E-52 T 13-10-2018 IPR036681 PgpA-like superfamily GO:0006629|GO:0008962 COP00_10785 6b6b07d5183f492d0dfc53cffe72526f 166 PIRSF PIRSF019587 5 166 7.0E-85 T 13-10-2018 IPR026038 Putative phosphatidylglycerophosphatase COP00_10785 6b6b07d5183f492d0dfc53cffe72526f 166 Gene3D G3DSA:1.10.3760.10 3 166 1.9E-72 T 13-10-2018 COP00_08720 93c03fe4c109c78d24b808f723f2885b 152 Pfam PF03061 Thioesterase superfamily 34 117 2.9E-10 T 13-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 COP00_08720 93c03fe4c109c78d24b808f723f2885b 152 SUPERFAMILY SSF54637 20 143 5.75E-30 T 13-10-2018 IPR029069 HotDog domain superfamily COP00_08720 93c03fe4c109c78d24b808f723f2885b 152 Gene3D G3DSA:3.10.129.10 17 148 1.3E-30 T 13-10-2018 COP00_24405 1dcf52b0c3ceabdd45e9e1f1016936fd 196 SUPERFAMILY SSF50685 129 180 2.48E-6 T 13-10-2018 IPR036908 RlpA-like domain superfamily COP00_24405 1dcf52b0c3ceabdd45e9e1f1016936fd 196 Gene3D G3DSA:2.40.40.10 41 186 4.2E-6 T 13-10-2018 IPR036908 RlpA-like domain superfamily COP00_24405 1dcf52b0c3ceabdd45e9e1f1016936fd 196 Pfam PF06725 3D domain 131 194 3.7E-11 T 13-10-2018 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 COP00_05660 318755506b7b2cc8796525e066d28491 364 Gene3D G3DSA:1.20.1090.10 173 358 4.1E-53 T 13-10-2018 COP00_05660 318755506b7b2cc8796525e066d28491 364 PIRSF PIRSF001455 3 362 1.1E-102 T 13-10-2018 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 COP00_05660 318755506b7b2cc8796525e066d28491 364 Pfam PF01761 3-dehydroquinate synthase 68 323 9.2E-95 T 13-10-2018 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 COP00_05660 318755506b7b2cc8796525e066d28491 364 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 1 354 65.549 T 13-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 COP00_05660 318755506b7b2cc8796525e066d28491 364 Gene3D G3DSA:3.40.50.1970 1 172 1.6E-58 T 13-10-2018 COP00_05660 318755506b7b2cc8796525e066d28491 364 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 13 350 1.3E-117 T 13-10-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 COP00_05660 318755506b7b2cc8796525e066d28491 364 SUPERFAMILY SSF56796 6 356 2.62E-96 T 13-10-2018 COP00_09720 216cc641898b2a899d00ac96329d7dfd 174 SMART SM00014 59 171 2.7E-16 T 13-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase COP00_09720 216cc641898b2a899d00ac96329d7dfd 174 Gene3D G3DSA:1.20.144.10 34 169 8.2E-18 T 13-10-2018 COP00_09720 216cc641898b2a899d00ac96329d7dfd 174 Pfam PF01569 PAP2 superfamily 67 171 8.5E-20 T 13-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase COP00_09720 216cc641898b2a899d00ac96329d7dfd 174 SUPERFAMILY SSF48317 7 171 6.15E-37 T 13-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily COP00_16430 d1dfeb9d5e88b16cb411adb8891bccbe 69 SMART SM00530 9 64 1.8E-16 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 COP00_16430 d1dfeb9d5e88b16cb411adb8891bccbe 69 SUPERFAMILY SSF47413 4 65 1.13E-17 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 COP00_16430 d1dfeb9d5e88b16cb411adb8891bccbe 69 Gene3D G3DSA:1.10.260.40 3 69 3.4E-17 T 13-10-2018 COP00_16430 d1dfeb9d5e88b16cb411adb8891bccbe 69 Pfam PF01381 Helix-turn-helix 10 64 6.3E-16 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 COP00_21520 c06291fe61789207abbaa85169a6552e 124 SMART SM00345 15 74 1.3E-21 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 COP00_21520 c06291fe61789207abbaa85169a6552e 124 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 74 1.2E-16 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 COP00_21520 c06291fe61789207abbaa85169a6552e 124 SUPERFAMILY SSF46785 4 78 1.47E-21 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_21520 c06291fe61789207abbaa85169a6552e 124 Gene3D G3DSA:1.10.10.10 7 124 4.8E-28 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_09230 7782d1e79fc94a3ab35bac3cd97b6466 171 Pfam PF06271 RDD family 32 158 5.8E-19 T 13-10-2018 IPR010432 RDD COP00_18265 8c0713a7cf5bc9e9924d0363dde6c87f 288 Gene3D G3DSA:1.10.3720.10 9 285 1.3E-53 T 13-10-2018 IPR035906 MetI-like superfamily COP00_18265 8c0713a7cf5bc9e9924d0363dde6c87f 288 SUPERFAMILY SSF161098 6 282 1.12E-52 T 13-10-2018 IPR035906 MetI-like superfamily COP00_04400 c893a51a27e571521b289072181f27ab 161 PRINTS PR00598 Bacterial regulatory protein MarR family signature 74 89 2.7E-7 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 COP00_04400 c893a51a27e571521b289072181f27ab 161 PRINTS PR00598 Bacterial regulatory protein MarR family signature 57 73 2.7E-7 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 COP00_04400 c893a51a27e571521b289072181f27ab 161 PRINTS PR00598 Bacterial regulatory protein MarR family signature 93 109 2.7E-7 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 COP00_04400 c893a51a27e571521b289072181f27ab 161 PRINTS PR00598 Bacterial regulatory protein MarR family signature 123 143 2.7E-7 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 COP00_04400 c893a51a27e571521b289072181f27ab 161 SUPERFAMILY SSF46785 15 146 1.74E-23 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_04400 c893a51a27e571521b289072181f27ab 161 Pfam PF01047 MarR family 40 97 8.8E-17 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 COP00_04400 c893a51a27e571521b289072181f27ab 161 SMART SM00347 33 133 1.0E-18 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 COP00_04400 c893a51a27e571521b289072181f27ab 161 Gene3D G3DSA:1.10.10.10 1 151 1.3E-25 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_16205 17b350f7a31f8c99f5e15d5ced29516e 97 Gene3D G3DSA:2.10.260.10 1 53 6.5E-27 T 13-10-2018 COP00_16205 17b350f7a31f8c99f5e15d5ced29516e 97 TIGRFAM TIGR01439 lp_hng_hel_AbrB: transcriptional regulator, AbrB family 10 51 4.9E-11 T 13-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 COP00_16205 17b350f7a31f8c99f5e15d5ced29516e 97 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 10 52 9.5E-12 T 13-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 COP00_16205 17b350f7a31f8c99f5e15d5ced29516e 97 SMART SM00966 10 53 6.6E-10 T 13-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 COP00_16205 17b350f7a31f8c99f5e15d5ced29516e 97 SUPERFAMILY SSF89447 3 54 1.31E-16 T 13-10-2018 IPR037914 SpoVT-AbrB domain superfamily COP00_18650 7f0a21b70088339a28ac636423f9b44f 464 SUPERFAMILY SSF53720 4 460 3.27E-170 T 13-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 COP00_18650 7f0a21b70088339a28ac636423f9b44f 464 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 259 270 - T 13-10-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0016491|GO:0055114 COP00_18650 7f0a21b70088339a28ac636423f9b44f 464 TIGRFAM TIGR01780 SSADH: succinate-semialdehyde dehydrogenase 7 456 4.6E-219 T 13-10-2018 IPR010102 Succinate semialdehyde dehydrogenase GO:0009013|GO:0009450|GO:0055114 Reactome: R-HSA-916853 COP00_18650 7f0a21b70088339a28ac636423f9b44f 464 Pfam PF00171 Aldehyde dehydrogenase family 5 457 1.5E-171 T 13-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 COP00_18650 7f0a21b70088339a28ac636423f9b44f 464 Gene3D G3DSA:3.40.309.10 238 430 5.8E-180 T 13-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 COP00_18650 7f0a21b70088339a28ac636423f9b44f 464 Gene3D G3DSA:3.40.605.10 4 452 5.8E-180 T 13-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 COP00_04405 2bc7b60dce807ea9482e7e57c0836d8e 503 Gene3D G3DSA:1.20.1720.10 14 221 2.8E-55 T 13-10-2018 COP00_04405 2bc7b60dce807ea9482e7e57c0836d8e 503 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 15 487 1.8E-87 T 13-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 COP00_04405 2bc7b60dce807ea9482e7e57c0836d8e 503 SUPERFAMILY SSF103473 13 499 4.97E-75 T 13-10-2018 IPR036259 MFS transporter superfamily COP00_04405 2bc7b60dce807ea9482e7e57c0836d8e 503 Pfam PF07690 Major Facilitator Superfamily 18 410 2.5E-56 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 COP00_10630 5399d26e9b0700d2c55793712352526c 198 Gene3D G3DSA:1.10.1760.20 1 189 4.8E-46 T 13-10-2018 COP00_10630 5399d26e9b0700d2c55793712352526c 198 Pfam PF02632 BioY family 37 182 1.9E-32 T 13-10-2018 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 COP00_10630 5399d26e9b0700d2c55793712352526c 198 PIRSF PIRSF016661 1 191 7.8E-45 T 13-10-2018 IPR003784 BioY protein GO:0005886|GO:0015225|GO:0015878 COP00_04470 2b91a3f76ef720aec2ad8b54ea3b1193 442 ProSitePatterns PS00138 Serine proteases, subtilase family, serine active site. 382 392 - T 13-10-2018 IPR023828 Peptidase S8, subtilisin, Ser-active site COP00_04470 2b91a3f76ef720aec2ad8b54ea3b1193 442 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 187 197 - T 13-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site COP00_04470 2b91a3f76ef720aec2ad8b54ea3b1193 442 SUPERFAMILY SSF52743 140 439 4.06E-80 T 13-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 COP00_04470 2b91a3f76ef720aec2ad8b54ea3b1193 442 PRINTS PR00723 Subtilisin serine protease family (S8) signature 146 165 1.6E-18 T 13-10-2018 IPR015500 Peptidase S8, subtilisin-related COP00_04470 2b91a3f76ef720aec2ad8b54ea3b1193 442 PRINTS PR00723 Subtilisin serine protease family (S8) signature 381 397 1.6E-18 T 13-10-2018 IPR015500 Peptidase S8, subtilisin-related COP00_04470 2b91a3f76ef720aec2ad8b54ea3b1193 442 PRINTS PR00723 Subtilisin serine protease family (S8) signature 183 196 1.6E-18 T 13-10-2018 IPR015500 Peptidase S8, subtilisin-related COP00_04470 2b91a3f76ef720aec2ad8b54ea3b1193 442 Pfam PF00082 Subtilase family 146 431 2.2E-56 T 13-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 COP00_04470 2b91a3f76ef720aec2ad8b54ea3b1193 442 Gene3D G3DSA:3.40.50.200 120 440 1.3E-100 T 13-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 COP00_04470 2b91a3f76ef720aec2ad8b54ea3b1193 442 ProSitePatterns PS00136 Serine proteases, subtilase family, aspartic acid active site. 151 161 - T 13-10-2018 IPR023827 Peptidase S8, subtilisin, Asp-active site COP00_09285 5aafb334deb0a8ed843e885f98733d64 269 TIGRFAM TIGR01856 hisJ_fam: histidinol phosphate phosphatase, HisJ family 4 264 1.7E-80 T 13-10-2018 IPR010140 Histidinol phosphate phosphatase, HisJ GO:0000105|GO:0004401 KEGG: 00340+3.1.3.15 COP00_09285 5aafb334deb0a8ed843e885f98733d64 269 Pfam PF02811 PHP domain 5 157 4.1E-12 T 13-10-2018 IPR004013 PHP domain GO:0003824 COP00_09285 5aafb334deb0a8ed843e885f98733d64 269 Gene3D G3DSA:3.20.20.140 2 269 1.1E-64 T 13-10-2018 COP00_09285 5aafb334deb0a8ed843e885f98733d64 269 SUPERFAMILY SSF89550 4 264 6.93E-31 T 13-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 COP00_20575 7e173e142343aedeaf75c1920707c067 140 SUPERFAMILY SSF46955 4 130 1.98E-24 T 13-10-2018 IPR009061 Putative DNA-binding domain superfamily COP00_20575 7e173e142343aedeaf75c1920707c067 140 Pfam PF13411 MerR HTH family regulatory protein 4 72 7.2E-19 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 COP00_20575 7e173e142343aedeaf75c1920707c067 140 SMART SM00422 4 74 1.8E-30 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 COP00_20575 7e173e142343aedeaf75c1920707c067 140 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 40 60 8.5E-7 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 COP00_20575 7e173e142343aedeaf75c1920707c067 140 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 5 16 8.5E-7 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 COP00_20575 7e173e142343aedeaf75c1920707c067 140 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 16 29 8.5E-7 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 COP00_20575 7e173e142343aedeaf75c1920707c067 140 Gene3D G3DSA:1.10.1660.10 1 139 1.8E-30 T 13-10-2018 COP00_13610 1e63601d717696a5a501f1f10f57da61 317 SUPERFAMILY SSF144083 236 297 6.93E-16 T 13-10-2018 COP00_13610 1e63601d717696a5a501f1f10f57da61 317 Gene3D G3DSA:1.20.58.340 224 300 2.3E-21 T 13-10-2018 COP00_13610 1e63601d717696a5a501f1f10f57da61 317 Gene3D G3DSA:1.20.58.340 111 220 1.9E-6 T 13-10-2018 COP00_13610 1e63601d717696a5a501f1f10f57da61 317 Pfam PF01544 CorA-like Mg2+ transporter protein 67 296 4.0E-33 T 13-10-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 COP00_13610 1e63601d717696a5a501f1f10f57da61 317 SUPERFAMILY SSF143865 66 212 2.22E-12 T 13-10-2018 COP00_04945 c3041448752f428ede9fafd05cc297cb 116 SUPERFAMILY SSF89442 1 115 4.71E-52 T 13-10-2018 IPR036492 Hypothetical protein YojF superfamily COP00_04945 c3041448752f428ede9fafd05cc297cb 116 Pfam PF08830 Protein of unknown function (DUF1806) 4 114 2.7E-49 T 13-10-2018 IPR014934 Protein of unknown function DUF1806 COP00_04945 c3041448752f428ede9fafd05cc297cb 116 Gene3D G3DSA:2.70.180.10 1 116 7.3E-51 T 13-10-2018 IPR036492 Hypothetical protein YojF superfamily COP00_06095 929bf49a82b04f3db8c564fb74b8be25 271 TIGRFAM TIGR01700 PNPH: purine nucleoside phosphorylase I, inosine and guanosine-specific 19 265 4.3E-123 T 13-10-2018 IPR011270 Purine nucleoside phosphorylase I, inosine/guanosine-specific GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-6798695|Reactome: R-HSA-74217|Reactome: R-HSA-74259 COP00_06095 929bf49a82b04f3db8c564fb74b8be25 271 Gene3D G3DSA:3.40.50.1580 1 267 5.9E-119 T 13-10-2018 COP00_06095 929bf49a82b04f3db8c564fb74b8be25 271 ProSitePatterns PS01240 Purine and other phosphorylases family 2 signature. 71 112 - T 13-10-2018 IPR018099 Purine phosphorylase, family 2, conserved site GO:0016763 COP00_06095 929bf49a82b04f3db8c564fb74b8be25 271 TIGRFAM TIGR01697 PNPH-PUNA-XAPA: inosine/guanosine/xanthosine phosphorylase family 18 264 4.2E-113 T 13-10-2018 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-6798695|Reactome: R-HSA-74217|Reactome: R-HSA-74259 COP00_06095 929bf49a82b04f3db8c564fb74b8be25 271 SUPERFAMILY SSF53167 2 267 2.23E-101 T 13-10-2018 IPR035994 Nucleoside phosphorylase superfamily GO:0003824|GO:0009116 COP00_06095 929bf49a82b04f3db8c564fb74b8be25 271 PIRSF PIRSF000477 1 267 1.3E-122 T 13-10-2018 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-6798695|Reactome: R-HSA-74217|Reactome: R-HSA-74259 COP00_06095 929bf49a82b04f3db8c564fb74b8be25 271 Pfam PF01048 Phosphorylase superfamily 19 265 3.0E-59 T 13-10-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 COP00_17740 2f651defbe7f97a53ccd09f940615453 357 Pfam PF13039 Protein of unknown function (DUF3900) 2 254 1.9E-136 T 13-10-2018 IPR025006 Protein of unknown function DUF3900 COP00_17740 2f651defbe7f97a53ccd09f940615453 357 Pfam PF13037 Domain of unknown function (DUF3898) 261 349 5.7E-41 T 13-10-2018 IPR025012 Domain of unknown function DUF3898 COP00_08540 2b75c694f7f041187dc628123175d96e 262 Gene3D G3DSA:3.40.50.10090 137 259 3.0E-21 T 13-10-2018 COP00_08540 2b75c694f7f041187dc628123175d96e 262 Gene3D G3DSA:3.40.50.10090 3 136 1.6E-26 T 13-10-2018 COP00_08540 2b75c694f7f041187dc628123175d96e 262 Pfam PF02602 Uroporphyrinogen-III synthase HemD 25 251 4.2E-52 T 13-10-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 COP00_08540 2b75c694f7f041187dc628123175d96e 262 SUPERFAMILY SSF69618 9 258 4.05E-63 T 13-10-2018 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 COP00_02035 84934c53f3cbe87000d30dfb239fbef5 99 Pfam PF07875 Coat F domain 15 77 1.0E-23 T 13-10-2018 IPR012851 Spore coat protein CotF-like COP00_10635 9e5330a9b70f9ac2ef7ba857c4b331d6 442 PRINTS PR00173 Glutamate-aspartate symporter signature 375 394 1.1E-5 T 13-10-2018 COP00_10635 9e5330a9b70f9ac2ef7ba857c4b331d6 442 PRINTS PR00173 Glutamate-aspartate symporter signature 15 35 1.1E-5 T 13-10-2018 COP00_10635 9e5330a9b70f9ac2ef7ba857c4b331d6 442 PRINTS PR00173 Glutamate-aspartate symporter signature 184 206 1.1E-5 T 13-10-2018 COP00_10635 9e5330a9b70f9ac2ef7ba857c4b331d6 442 Pfam PF03553 Na+/H+ antiporter family 150 436 1.0E-72 T 13-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 COP00_10635 9e5330a9b70f9ac2ef7ba857c4b331d6 442 Pfam PF13726 Na+-H+ antiporter family 2 88 9.6E-33 T 13-10-2018 IPR032813 Putative Na+/H+ antiporter, N-terminal COP00_00325 a64c3d5dd02b942c783bd64aa2bd4f08 291 SUPERFAMILY SSF46785 1 87 3.67E-18 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_00325 a64c3d5dd02b942c783bd64aa2bd4f08 291 SUPERFAMILY SSF53850 88 290 1.0E-25 T 13-10-2018 COP00_00325 a64c3d5dd02b942c783bd64aa2bd4f08 291 Gene3D G3DSA:3.40.190.290 85 287 5.1E-68 T 13-10-2018 COP00_00325 a64c3d5dd02b942c783bd64aa2bd4f08 291 Gene3D G3DSA:1.10.10.10 1 84 3.2E-22 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_00325 a64c3d5dd02b942c783bd64aa2bd4f08 291 Pfam PF03466 LysR substrate binding domain 87 285 1.7E-28 T 13-10-2018 IPR005119 LysR, substrate-binding COP00_00325 a64c3d5dd02b942c783bd64aa2bd4f08 291 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 8.5E-16 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 COP00_00325 a64c3d5dd02b942c783bd64aa2bd4f08 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.1E-6 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 COP00_00325 a64c3d5dd02b942c783bd64aa2bd4f08 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.1E-6 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 COP00_00325 a64c3d5dd02b942c783bd64aa2bd4f08 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.1E-6 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 COP00_23705 f03a53ed34e528d09be9db7a0d0080b5 332 Pfam PF01384 Phosphate transporter family 22 320 1.5E-89 T 13-10-2018 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 COP00_01955 f4d6fd674fb9facdde4712938c97cf1f 113 Pfam PF11337 Protein of unknown function (DUF3139) 6 85 7.9E-7 T 13-10-2018 IPR021486 Protein of unknown function DUF3139 COP00_11095 fa8d8f8b42df084d66cbc029fbbeaf2e 382 Gene3D G3DSA:3.40.710.10 17 297 1.0E-82 T 13-10-2018 COP00_11095 fa8d8f8b42df084d66cbc029fbbeaf2e 382 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 26 253 3.8E-48 T 13-10-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 COP00_11095 fa8d8f8b42df084d66cbc029fbbeaf2e 382 SUPERFAMILY SSF56601 5 273 3.55E-61 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like COP00_11095 fa8d8f8b42df084d66cbc029fbbeaf2e 382 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 106 123 5.7E-8 T 13-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 COP00_11095 fa8d8f8b42df084d66cbc029fbbeaf2e 382 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 58 69 5.7E-8 T 13-10-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 COP00_09795 6aa608cc2c0649585c9fc61dc2eb9793 50 Pfam PF12606 Tumour necrosis factor receptor superfamily member 19 1 41 6.1E-8 T 13-10-2018 IPR022248 TNF receptor family, RELT COP00_15815 3d96be59bf2e6ec00e9b4ae821ef73f3 311 Pfam PF09991 Predicted membrane protein (DUF2232) 16 299 1.2E-74 T 13-10-2018 IPR018710 Protein of unknown function DUF2232 COP00_15815 3d96be59bf2e6ec00e9b4ae821ef73f3 311 Gene3D G3DSA:1.10.1760.20 1 202 6.0E-8 T 13-10-2018 COP00_22425 d0b030e32e1f9945242f3db09b3ee9ba 538 Gene3D G3DSA:3.40.50.980 34 350 1.7E-126 T 13-10-2018 COP00_22425 d0b030e32e1f9945242f3db09b3ee9ba 538 Pfam PF13193 AMP-binding enzyme C-terminal domain 445 520 4.3E-14 T 13-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain COP00_22425 d0b030e32e1f9945242f3db09b3ee9ba 538 Gene3D G3DSA:2.30.38.10 351 429 1.7E-126 T 13-10-2018 COP00_22425 d0b030e32e1f9945242f3db09b3ee9ba 538 Gene3D G3DSA:3.40.50.980 37 202 1.7E-126 T 13-10-2018 COP00_22425 d0b030e32e1f9945242f3db09b3ee9ba 538 ProSitePatterns PS00455 Putative AMP-binding domain signature. 186 197 - T 13-10-2018 IPR020845 AMP-binding, conserved site COP00_22425 d0b030e32e1f9945242f3db09b3ee9ba 538 Pfam PF00501 AMP-binding enzyme 15 436 3.0E-114 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 COP00_22425 d0b030e32e1f9945242f3db09b3ee9ba 538 SUPERFAMILY SSF56801 7 532 5.76E-156 T 13-10-2018 COP00_22425 d0b030e32e1f9945242f3db09b3ee9ba 538 Gene3D G3DSA:3.30.300.30 430 536 8.6E-31 T 13-10-2018 COP00_21810 5ef279093b99c16c5fed4838af981455 462 SUPERFAMILY SSF46785 8 82 7.49E-20 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_21810 5ef279093b99c16c5fed4838af981455 462 Gene3D G3DSA:1.10.10.10 2 85 1.9E-22 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_21810 5ef279093b99c16c5fed4838af981455 462 Pfam PF00392 Bacterial regulatory proteins, gntR family 15 77 6.2E-15 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 COP00_21810 5ef279093b99c16c5fed4838af981455 462 Gene3D G3DSA:3.40.640.10 95 456 1.3E-117 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 COP00_21810 5ef279093b99c16c5fed4838af981455 462 SUPERFAMILY SSF53383 92 461 2.34E-81 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase COP00_21810 5ef279093b99c16c5fed4838af981455 462 SMART SM00345 19 78 2.1E-9 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 COP00_21810 5ef279093b99c16c5fed4838af981455 462 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 38 52 3.1E-5 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 COP00_21810 5ef279093b99c16c5fed4838af981455 462 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 52 68 3.1E-5 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 COP00_03495 6862464ddd123b11dbcfd9f31693ed6c 104 Pfam PF00893 Small Multidrug Resistance protein 1 93 1.2E-33 T 13-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 COP00_03495 6862464ddd123b11dbcfd9f31693ed6c 104 Gene3D G3DSA:1.10.3730.20 1 104 2.3E-33 T 13-10-2018 COP00_03495 6862464ddd123b11dbcfd9f31693ed6c 104 SUPERFAMILY SSF103481 5 103 2.88E-21 T 13-10-2018 COP00_06885 e89ff650c9f0b0b085090e0ad2a4fede 87 TIGRFAM TIGR01592 holin_SPP1: holin, SPP1 family 5 85 3.3E-34 T 13-10-2018 IPR006479 Holin COP00_06885 e89ff650c9f0b0b085090e0ad2a4fede 87 ProDom PD008023 HOLIN TRANSMEMBRANE MEMBRANE PROPHAGE FAMILY BHLB SPP1 5'REGION HOLIN ORF050 5 87 2.0E-37 T 13-10-2018 IPR006479 Holin COP00_06885 e89ff650c9f0b0b085090e0ad2a4fede 87 Pfam PF04688 SPP1 phage holin 4 82 4.4E-31 T 13-10-2018 IPR006479 Holin COP00_06650 18f9a7b4040c5e05d701a9b7575ae8da 68 TIGRFAM TIGR02848 spore_III_AC: stage III sporulation protein AC 3 66 2.2E-32 T 13-10-2018 IPR009570 Stage III sporulation protein AC COP00_06650 18f9a7b4040c5e05d701a9b7575ae8da 68 Pfam PF06686 Stage III sporulation protein AC/AD protein family 8 61 4.8E-16 T 13-10-2018 IPR025664 Stage III sporulation protein AC/AD family COP00_20470 fc31d0c351afe3192984e56a4ae2f90c 480 PIRSF PIRSF002457 6 480 2.0E-125 T 13-10-2018 IPR030676 Citrate carrier CitT-related COP00_20470 fc31d0c351afe3192984e56a4ae2f90c 480 Pfam PF00939 Sodium:sulfate symporter transmembrane region 21 479 2.7E-126 T 13-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 COP00_20470 fc31d0c351afe3192984e56a4ae2f90c 480 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 37 474 1.8E-103 T 13-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 COP00_02105 2a8964c1e21bf7c8a48a1572866e297d 131 PIRSF PIRSF005087 1 126 1.8E-43 T 13-10-2018 IPR004465 Ribonucleotide reductase Class Ib, NrdI COP00_02105 2a8964c1e21bf7c8a48a1572866e297d 131 TIGRFAM TIGR00333 nrdI: nrdI protein 4 125 4.5E-44 T 13-10-2018 IPR004465 Ribonucleotide reductase Class Ib, NrdI COP00_02105 2a8964c1e21bf7c8a48a1572866e297d 131 SUPERFAMILY SSF52218 2 120 2.36E-23 T 13-10-2018 IPR029039 Flavoprotein-like superfamily COP00_02105 2a8964c1e21bf7c8a48a1572866e297d 131 Pfam PF07972 NrdI Flavodoxin like 4 112 1.5E-33 T 13-10-2018 IPR004465 Ribonucleotide reductase Class Ib, NrdI COP00_02105 2a8964c1e21bf7c8a48a1572866e297d 131 Gene3D G3DSA:3.40.50.360 1 130 1.0E-46 T 13-10-2018 IPR029039 Flavoprotein-like superfamily COP00_02105 2a8964c1e21bf7c8a48a1572866e297d 131 Hamap MF_00128 Protein NrdI [nrdI]. 2 122 27.416 T 13-10-2018 IPR020852 Ribonucleotide reductase, class Ib, NrdI, bacterial COP00_21145 d2f4be058347b12b714f5a6379f19bda 319 Pfam PF00535 Glycosyl transferase family 2 7 167 3.6E-38 T 13-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 COP00_21145 d2f4be058347b12b714f5a6379f19bda 319 SUPERFAMILY SSF53448 6 256 5.51E-42 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases COP00_21145 d2f4be058347b12b714f5a6379f19bda 319 Gene3D G3DSA:3.90.550.10 2 201 1.9E-37 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases COP00_08535 aa1d85b36372e3ceb4efaaa73bcfff78 324 Gene3D G3DSA:3.20.20.70 1 323 4.4E-151 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 COP00_08535 aa1d85b36372e3ceb4efaaa73bcfff78 324 SMART SM01004 3 322 2.0E-241 T 13-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 COP00_08535 aa1d85b36372e3ceb4efaaa73bcfff78 324 PIRSF PIRSF001415 1 324 1.7E-154 T 13-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 COP00_08535 aa1d85b36372e3ceb4efaaa73bcfff78 324 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 241 257 6.8E-58 T 13-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 COP00_08535 aa1d85b36372e3ceb4efaaa73bcfff78 324 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 189 208 6.8E-58 T 13-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 COP00_08535 aa1d85b36372e3ceb4efaaa73bcfff78 324 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 266 281 6.8E-58 T 13-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 COP00_08535 aa1d85b36372e3ceb4efaaa73bcfff78 324 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 296 315 6.8E-58 T 13-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 COP00_08535 aa1d85b36372e3ceb4efaaa73bcfff78 324 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 121 135 6.8E-58 T 13-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 COP00_08535 aa1d85b36372e3ceb4efaaa73bcfff78 324 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 151 170 6.8E-58 T 13-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 COP00_08535 aa1d85b36372e3ceb4efaaa73bcfff78 324 Pfam PF00490 Delta-aminolevulinic acid dehydratase 6 321 1.6E-151 T 13-10-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 COP00_08535 aa1d85b36372e3ceb4efaaa73bcfff78 324 SUPERFAMILY SSF51569 4 323 3.96E-143 T 13-10-2018 COP00_16270 42f76f3bf707f524827ad3d0b9c360f0 456 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 3 452 41.665 T 13-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 COP00_16270 42f76f3bf707f524827ad3d0b9c360f0 456 Pfam PF00483 Nucleotidyl transferase 6 217 2.3E-23 T 13-10-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 COP00_16270 42f76f3bf707f524827ad3d0b9c360f0 456 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 267 300 8.4E-8 T 13-10-2018 IPR001451 Hexapeptide repeat COP00_16270 42f76f3bf707f524827ad3d0b9c360f0 456 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 318 351 1.8E-10 T 13-10-2018 IPR001451 Hexapeptide repeat COP00_16270 42f76f3bf707f524827ad3d0b9c360f0 456 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 395 428 3.2E-6 T 13-10-2018 IPR001451 Hexapeptide repeat COP00_16270 42f76f3bf707f524827ad3d0b9c360f0 456 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 403 431 - T 13-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 COP00_16270 42f76f3bf707f524827ad3d0b9c360f0 456 SUPERFAMILY SSF51161 255 440 1.23E-49 T 13-10-2018 IPR011004 Trimeric LpxA-like superfamily COP00_16270 42f76f3bf707f524827ad3d0b9c360f0 456 Gene3D G3DSA:2.160.10.10 253 440 1.0E-52 T 13-10-2018 COP00_16270 42f76f3bf707f524827ad3d0b9c360f0 456 SUPERFAMILY SSF53448 4 306 2.14E-65 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases COP00_16270 42f76f3bf707f524827ad3d0b9c360f0 456 Gene3D G3DSA:3.90.550.10 1 252 3.9E-80 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases COP00_16270 42f76f3bf707f524827ad3d0b9c360f0 456 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 6 454 1.0E-187 T 13-10-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|MetaCyc: PWY-5514 COP00_10985 41782470fe086141bad8e655d8275177 222 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 36 222 3.8E-22 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 COP00_10985 41782470fe086141bad8e655d8275177 222 SUPERFAMILY SSF161098 13 208 5.63E-46 T 13-10-2018 IPR035906 MetI-like superfamily COP00_10985 41782470fe086141bad8e655d8275177 222 Gene3D G3DSA:1.10.3720.10 8 222 9.2E-47 T 13-10-2018 IPR035906 MetI-like superfamily COP00_10715 50741adec2c375a6f2d431c9f95f34ec 355 SUPERFAMILY SSF51905 2 190 5.18E-16 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily COP00_10715 50741adec2c375a6f2d431c9f95f34ec 355 Gene3D G3DSA:3.50.50.100 1 354 7.2E-76 T 13-10-2018 COP00_10715 50741adec2c375a6f2d431c9f95f34ec 355 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 3 287 5.7E-36 T 13-10-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 COP00_10715 50741adec2c375a6f2d431c9f95f34ec 355 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 251 273 6.3E-6 T 13-10-2018 COP00_10715 50741adec2c375a6f2d431c9f95f34ec 355 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 4 23 6.3E-6 T 13-10-2018 COP00_10715 50741adec2c375a6f2d431c9f95f34ec 355 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 96 114 6.3E-6 T 13-10-2018 COP00_10715 50741adec2c375a6f2d431c9f95f34ec 355 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 143 161 6.3E-6 T 13-10-2018 COP00_10715 50741adec2c375a6f2d431c9f95f34ec 355 SUPERFAMILY SSF51905 141 300 3.74E-23 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily COP00_10715 50741adec2c375a6f2d431c9f95f34ec 355 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 3 25 7.7E-7 T 13-10-2018 COP00_10715 50741adec2c375a6f2d431c9f95f34ec 355 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 225 239 7.7E-7 T 13-10-2018 COP00_10715 50741adec2c375a6f2d431c9f95f34ec 355 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 143 168 7.7E-7 T 13-10-2018 COP00_10715 50741adec2c375a6f2d431c9f95f34ec 355 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 266 273 7.7E-7 T 13-10-2018 COP00_04595 7314429ac21453e0f2b571bfd4561969 273 SUPERFAMILY SSF50685 213 260 3.49E-8 T 13-10-2018 IPR036908 RlpA-like domain superfamily COP00_04595 7314429ac21453e0f2b571bfd4561969 273 Gene3D G3DSA:3.10.350.10 24 77 2.1E-18 T 13-10-2018 IPR036779 LysM domain superfamily COP00_04595 7314429ac21453e0f2b571bfd4561969 273 Pfam PF06725 3D domain 212 273 1.3E-21 T 13-10-2018 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 COP00_04595 7314429ac21453e0f2b571bfd4561969 273 Gene3D G3DSA:2.40.40.10 118 265 5.9E-7 T 13-10-2018 IPR036908 RlpA-like domain superfamily COP00_04595 7314429ac21453e0f2b571bfd4561969 273 SUPERFAMILY SSF54106 27 69 1.44E-11 T 13-10-2018 COP00_04595 7314429ac21453e0f2b571bfd4561969 273 SUPERFAMILY SSF54106 78 120 5.62E-12 T 13-10-2018 COP00_04595 7314429ac21453e0f2b571bfd4561969 273 Pfam PF01476 LysM domain 28 69 6.3E-15 T 13-10-2018 IPR018392 LysM domain COP00_04595 7314429ac21453e0f2b571bfd4561969 273 Pfam PF01476 LysM domain 79 119 1.6E-14 T 13-10-2018 IPR018392 LysM domain COP00_04595 7314429ac21453e0f2b571bfd4561969 273 Gene3D G3DSA:3.10.350.10 78 117 3.4E-16 T 13-10-2018 IPR036779 LysM domain superfamily COP00_04595 7314429ac21453e0f2b571bfd4561969 273 SMART SM00257 27 70 2.2E-16 T 13-10-2018 IPR018392 LysM domain COP00_04595 7314429ac21453e0f2b571bfd4561969 273 SMART SM00257 78 121 1.9E-14 T 13-10-2018 IPR018392 LysM domain COP00_12255 8babcdd72e8c9d8bc1a88f73e3693792 143 SMART SM00860 23 130 3.5E-10 T 13-10-2018 IPR018958 Knr4/Smi1-like domain COP00_12255 8babcdd72e8c9d8bc1a88f73e3693792 143 SUPERFAMILY SSF160631 11 141 1.83E-29 T 13-10-2018 COP00_12255 8babcdd72e8c9d8bc1a88f73e3693792 143 Gene3D G3DSA:3.40.1580.10 2 142 2.9E-31 T 13-10-2018 IPR037883 Knr4/Smi1-like domain superfamily COP00_12255 8babcdd72e8c9d8bc1a88f73e3693792 143 Pfam PF14567 SMI1-KNR4 cell-wall 8 132 1.9E-26 T 13-10-2018 COP00_15580 5104112d66c307e7d319730596306109 334 Pfam PF01032 FecCD transport family 20 333 1.6E-83 T 13-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 COP00_15580 5104112d66c307e7d319730596306109 334 SUPERFAMILY SSF81345 7 333 1.07E-73 T 13-10-2018 IPR037294 ABC transporter, BtuC-like COP00_15580 5104112d66c307e7d319730596306109 334 PRINTS PR00173 Glutamate-aspartate symporter signature 15 35 2.0E-6 T 13-10-2018 COP00_15580 5104112d66c307e7d319730596306109 334 PRINTS PR00173 Glutamate-aspartate symporter signature 56 76 2.0E-6 T 13-10-2018 COP00_15580 5104112d66c307e7d319730596306109 334 PRINTS PR00173 Glutamate-aspartate symporter signature 147 169 2.0E-6 T 13-10-2018 COP00_15580 5104112d66c307e7d319730596306109 334 Gene3D G3DSA:1.10.3470.10 7 334 1.6E-86 T 13-10-2018 IPR037294 ABC transporter, BtuC-like COP00_10745 e6210de3a82067d6558c3f745d284c44 109 SUPERFAMILY SSF52833 1 106 2.91E-45 T 13-10-2018 IPR036249 Thioredoxin-like superfamily COP00_10745 e6210de3a82067d6558c3f745d284c44 109 Gene3D G3DSA:3.40.30.30 1 106 4.3E-42 T 13-10-2018 IPR038218 YuzD-like superfamily COP00_10745 e6210de3a82067d6558c3f745d284c44 109 Pfam PF07315 Protein of unknown function (DUF1462) 9 101 3.3E-42 T 13-10-2018 IPR009190 Protein of unknown function DUF1462 COP00_10745 e6210de3a82067d6558c3f745d284c44 109 PIRSF PIRSF010603 1 107 8.9E-47 T 13-10-2018 IPR009190 Protein of unknown function DUF1462 COP00_18720 4c9c158a3314d0576c1662811f51af44 232 Gene3D G3DSA:2.60.120.1270 23 232 3.7E-86 T 13-10-2018 IPR038682 YrpD-like superfamily COP00_18720 4c9c158a3314d0576c1662811f51af44 232 Pfam PF15493 Domain of unknown function, YrpD 32 230 1.2E-80 T 13-10-2018 IPR029143 Protein of unknown function, YrpD COP00_23955 6323981bbe2d79cc387d468c14445398 141 SUPERFAMILY SSF82784 2 137 2.49E-33 T 13-10-2018 IPR036102 OsmC/Ohr superfamily COP00_23955 6323981bbe2d79cc387d468c14445398 141 Gene3D G3DSA:3.30.300.20 47 139 3.9E-30 T 13-10-2018 IPR015946 K homology domain-like, alpha/beta COP00_23955 6323981bbe2d79cc387d468c14445398 141 Gene3D G3DSA:2.20.25.10 4 44 5.8E-14 T 13-10-2018 COP00_23955 6323981bbe2d79cc387d468c14445398 141 TIGRFAM TIGR03561 organ_hyd_perox: peroxiredoxin, Ohr subfamily 5 138 5.7E-47 T 13-10-2018 IPR019953 Organic hydroperoxide resistance protein famiy GO:0006979 COP00_23955 6323981bbe2d79cc387d468c14445398 141 Pfam PF02566 OsmC-like protein 43 137 9.2E-19 T 13-10-2018 IPR003718 OsmC/Ohr family COP00_22405 b487cc8e8044489958d017f9fe1a52b5 384 Pfam PF05145 Transition state regulatory protein AbrB 33 365 2.3E-83 T 13-10-2018 IPR007820 AbrB family GO:0010468|GO:0016021 COP00_22405 b487cc8e8044489958d017f9fe1a52b5 384 PIRSF PIRSF038991 1 374 9.3E-91 T 13-10-2018 IPR007820 AbrB family GO:0010468|GO:0016021 COP00_22405 b487cc8e8044489958d017f9fe1a52b5 384 TIGRFAM TIGR03082 Gneg_AbrB_dup: membrane protein AbrB duplication 204 365 2.0E-36 T 13-10-2018 IPR017516 AbrB duplication COP00_22405 b487cc8e8044489958d017f9fe1a52b5 384 TIGRFAM TIGR03082 Gneg_AbrB_dup: membrane protein AbrB duplication 12 173 4.8E-35 T 13-10-2018 IPR017516 AbrB duplication COP00_07325 eedd4b5595c67edbb4c5f73963db90c5 343 Gene3D G3DSA:3.30.450.40 104 336 9.6E-61 T 13-10-2018 IPR029016 GAF-like domain superfamily COP00_07325 eedd4b5595c67edbb4c5f73963db90c5 343 TIGRFAM TIGR00331 hrcA: heat-inducible transcription repressor HrcA 3 336 4.1E-118 T 13-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 COP00_07325 eedd4b5595c67edbb4c5f73963db90c5 343 SUPERFAMILY SSF55781 71 340 3.14E-72 T 13-10-2018 COP00_07325 eedd4b5595c67edbb4c5f73963db90c5 343 Gene3D G3DSA:3.30.390.60 128 230 9.6E-61 T 13-10-2018 IPR023120 Winged helix-turn-helix transcription repressor, HrcA, inserted dimerising domain superfamily COP00_07325 eedd4b5595c67edbb4c5f73963db90c5 343 Hamap MF_00081 Heat-inducible transcription repressor HrcA [hrcA]. 1 330 34.112 T 13-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 COP00_07325 eedd4b5595c67edbb4c5f73963db90c5 343 Gene3D G3DSA:1.10.10.10 1 84 2.7E-33 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_07325 eedd4b5595c67edbb4c5f73963db90c5 343 Pfam PF01628 HrcA protein C terminal domain 104 323 3.4E-68 T 13-10-2018 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal GO:0003677|GO:0006355 COP00_07325 eedd4b5595c67edbb4c5f73963db90c5 343 PIRSF PIRSF005485 1 341 9.5E-128 T 13-10-2018 IPR002571 Heat-inducible transcription repressor HrcA GO:0003677|GO:0006355 COP00_07325 eedd4b5595c67edbb4c5f73963db90c5 343 SUPERFAMILY SSF46785 1 84 5.94E-23 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_04275 6b317bee8b9898d2b98b5fdbba951d59 284 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 11 272 1.4E-82 T 13-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 COP00_04275 6b317bee8b9898d2b98b5fdbba951d59 284 SUPERFAMILY SSF48179 168 276 1.62E-31 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 COP00_04275 6b317bee8b9898d2b98b5fdbba951d59 284 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 11 106 3.7E-16 T 13-10-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal COP00_04275 6b317bee8b9898d2b98b5fdbba951d59 284 Gene3D G3DSA:3.40.50.720 1 170 2.1E-42 T 13-10-2018 COP00_04275 6b317bee8b9898d2b98b5fdbba951d59 284 PIRSF PIRSF000193 8 276 2.5E-75 T 13-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 COP00_04275 6b317bee8b9898d2b98b5fdbba951d59 284 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 9 273 24.572 T 13-10-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 COP00_04275 6b317bee8b9898d2b98b5fdbba951d59 284 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 169 272 2.4E-32 T 13-10-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 COP00_04275 6b317bee8b9898d2b98b5fdbba951d59 284 SUPERFAMILY SSF51735 9 166 1.62E-26 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily COP00_04275 6b317bee8b9898d2b98b5fdbba951d59 284 Gene3D G3DSA:1.10.3730.10 171 278 5.7E-35 T 13-10-2018 COP00_13325 39fd7990614c596e4b65a3dca3d264a3 203 SUPERFAMILY SSF51569 5 195 1.56E-56 T 13-10-2018 COP00_13325 39fd7990614c596e4b65a3dca3d264a3 203 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 11 188 1.6E-59 T 13-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 COP00_13325 39fd7990614c596e4b65a3dca3d264a3 203 Gene3D G3DSA:3.20.20.70 2 203 5.9E-66 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 COP00_13325 39fd7990614c596e4b65a3dca3d264a3 203 Pfam PF01081 KDPG and KHG aldolase 11 197 7.1E-60 T 13-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 COP00_02865 563c8c3d3009409955802afac786b776 302 Gene3D G3DSA:3.40.50.200 41 302 9.7E-65 T 13-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 COP00_02865 563c8c3d3009409955802afac786b776 302 Pfam PF00082 Subtilase family 61 297 5.1E-39 T 13-10-2018 IPR000209 Peptidase S8/S53 domain GO:0004252|GO:0006508 COP00_02865 563c8c3d3009409955802afac786b776 302 ProSitePatterns PS00137 Serine proteases, subtilase family, histidine active site. 100 110 - T 13-10-2018 IPR022398 Peptidase S8, subtilisin, His-active site COP00_02865 563c8c3d3009409955802afac786b776 302 SUPERFAMILY SSF52743 60 299 7.86E-66 T 13-10-2018 IPR036852 Peptidase S8/S53 domain superfamily GO:0004252|GO:0006508 COP00_02865 563c8c3d3009409955802afac786b776 302 PRINTS PR00723 Subtilisin serine protease family (S8) signature 96 109 1.1E-5 T 13-10-2018 IPR015500 Peptidase S8, subtilisin-related COP00_02865 563c8c3d3009409955802afac786b776 302 PRINTS PR00723 Subtilisin serine protease family (S8) signature 249 265 1.1E-5 T 13-10-2018 IPR015500 Peptidase S8, subtilisin-related COP00_02865 563c8c3d3009409955802afac786b776 302 PRINTS PR00723 Subtilisin serine protease family (S8) signature 58 77 1.1E-5 T 13-10-2018 IPR015500 Peptidase S8, subtilisin-related COP00_14395 b1ac36678b2bf467c35380c8d1ad0e8a 448 Hamap MF_00455 Xylose isomerase [xylA]. 9 434 54.515 T 13-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 COP00_14395 b1ac36678b2bf467c35380c8d1ad0e8a 448 SUPERFAMILY SSF51658 2 437 2.49E-170 T 13-10-2018 IPR036237 Xylose isomerase-like superfamily COP00_14395 b1ac36678b2bf467c35380c8d1ad0e8a 448 TIGRFAM TIGR02630 xylose_isom_A: xylose isomerase 2 434 2.7E-221 T 13-10-2018 IPR013452 Xylose isomerase, bacterial-type GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 COP00_14395 b1ac36678b2bf467c35380c8d1ad0e8a 448 PRINTS PR00688 Xylose isomerase signature 131 151 6.0E-96 T 13-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 COP00_14395 b1ac36678b2bf467c35380c8d1ad0e8a 448 PRINTS PR00688 Xylose isomerase signature 154 173 6.0E-96 T 13-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 COP00_14395 b1ac36678b2bf467c35380c8d1ad0e8a 448 PRINTS PR00688 Xylose isomerase signature 227 251 6.0E-96 T 13-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 COP00_14395 b1ac36678b2bf467c35380c8d1ad0e8a 448 PRINTS PR00688 Xylose isomerase signature 298 309 6.0E-96 T 13-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 COP00_14395 b1ac36678b2bf467c35380c8d1ad0e8a 448 PRINTS PR00688 Xylose isomerase signature 331 342 6.0E-96 T 13-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 COP00_14395 b1ac36678b2bf467c35380c8d1ad0e8a 448 PRINTS PR00688 Xylose isomerase signature 205 224 6.0E-96 T 13-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 COP00_14395 b1ac36678b2bf467c35380c8d1ad0e8a 448 PRINTS PR00688 Xylose isomerase signature 269 296 6.0E-96 T 13-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 COP00_14395 b1ac36678b2bf467c35380c8d1ad0e8a 448 PRINTS PR00688 Xylose isomerase signature 90 112 6.0E-96 T 13-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 COP00_14395 b1ac36678b2bf467c35380c8d1ad0e8a 448 PRINTS PR00688 Xylose isomerase signature 178 199 6.0E-96 T 13-10-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 COP00_14395 b1ac36678b2bf467c35380c8d1ad0e8a 448 Pfam PF01261 Xylose isomerase-like TIM barrel 108 304 2.8E-7 T 13-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain COP00_14395 b1ac36678b2bf467c35380c8d1ad0e8a 448 Gene3D G3DSA:3.20.20.150 1 441 2.7E-185 T 13-10-2018 COP00_13245 d81380b6853eb017892c62af33a5e5b1 616 Pfam PF00535 Glycosyl transferase family 2 9 121 4.4E-33 T 13-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 COP00_13245 d81380b6853eb017892c62af33a5e5b1 616 Gene3D G3DSA:3.90.550.10 6 205 5.9E-46 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases COP00_13245 d81380b6853eb017892c62af33a5e5b1 616 SUPERFAMILY SSF53448 7 236 2.13E-47 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases COP00_13290 05a6be37d956f44413680bf9352667d9 260 Hamap MF_02070 N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase. 3 240 56.592 T 13-10-2018 IPR034714 N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase GO:0047244 MetaCyc: PWY-7815|MetaCyc: PWY-7816|MetaCyc: PWY-7819 COP00_13290 05a6be37d956f44413680bf9352667d9 260 Pfam PF03808 Glycosyl transferase WecB/TagA/CpsF family 61 225 5.3E-59 T 13-10-2018 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 COP00_13290 05a6be37d956f44413680bf9352667d9 260 TIGRFAM TIGR00696 wecG_tagA_cpsF: glycosyltransferase, WecB/TagA/CpsF family 56 231 2.1E-74 T 13-10-2018 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 COP00_15400 09fa4fd793dec2fe20447b8e92758b1e 333 SMART SM00387 216 328 2.9E-25 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase COP00_15400 09fa4fd793dec2fe20447b8e92758b1e 333 SMART SM00388 113 170 1.5E-5 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 COP00_15400 09fa4fd793dec2fe20447b8e92758b1e 333 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 216 324 5.6E-19 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase COP00_15400 09fa4fd793dec2fe20447b8e92758b1e 333 SUPERFAMILY SSF55874 159 324 2.1E-31 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily COP00_15400 09fa4fd793dec2fe20447b8e92758b1e 333 SUPERFAMILY SSF47384 98 167 2.35E-6 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 COP00_15400 09fa4fd793dec2fe20447b8e92758b1e 333 Gene3D G3DSA:1.10.287.130 62 166 6.0E-7 T 13-10-2018 COP00_15400 09fa4fd793dec2fe20447b8e92758b1e 333 Gene3D G3DSA:3.30.565.10 175 330 7.9E-31 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily COP00_15400 09fa4fd793dec2fe20447b8e92758b1e 333 PRINTS PR00344 Bacterial sensor protein C-terminal signature 288 306 1.1E-9 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 COP00_15400 09fa4fd793dec2fe20447b8e92758b1e 333 PRINTS PR00344 Bacterial sensor protein C-terminal signature 254 268 1.1E-9 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 COP00_15400 09fa4fd793dec2fe20447b8e92758b1e 333 PRINTS PR00344 Bacterial sensor protein C-terminal signature 272 282 1.1E-9 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 COP00_15400 09fa4fd793dec2fe20447b8e92758b1e 333 PRINTS PR00344 Bacterial sensor protein C-terminal signature 312 325 1.1E-9 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 COP00_00815 2411916682171ae709a9c69fc40913af 312 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 2 309 9.3E-134 T 13-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 COP00_00815 2411916682171ae709a9c69fc40913af 312 Gene3D G3DSA:1.10.150.170 111 215 9.6E-108 T 13-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 COP00_00815 2411916682171ae709a9c69fc40913af 312 Gene3D G3DSA:3.40.50.150 7 309 9.6E-108 T 13-10-2018 COP00_00815 2411916682171ae709a9c69fc40913af 312 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 4 310 39.195 T 13-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 COP00_00815 2411916682171ae709a9c69fc40913af 312 SUPERFAMILY SSF81799 113 214 2.35E-36 T 13-10-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain superfamily GO:0008168 COP00_00815 2411916682171ae709a9c69fc40913af 312 Pfam PF01795 MraW methylase family 2 309 5.1E-136 T 13-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 COP00_00815 2411916682171ae709a9c69fc40913af 312 SUPERFAMILY SSF53335 4 309 7.68E-48 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase COP00_00815 2411916682171ae709a9c69fc40913af 312 PIRSF PIRSF004486 1 311 5.7E-112 T 13-10-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 COP00_06575 82fa9480f8cb275077db5e01b9572ffd 281 Gene3D G3DSA:3.40.50.150 65 281 1.4E-83 T 13-10-2018 COP00_06575 82fa9480f8cb275077db5e01b9572ffd 281 Pfam PF01479 S4 domain 6 48 1.3E-8 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 COP00_06575 82fa9480f8cb275077db5e01b9572ffd 281 SUPERFAMILY SSF55174 5 71 6.18E-12 T 13-10-2018 COP00_06575 82fa9480f8cb275077db5e01b9572ffd 281 PIRSF PIRSF005578 1 269 2.2E-104 T 13-10-2018 IPR004538 Haemolysin A /rRNA methyltransferase TlyA GO:0003723 COP00_06575 82fa9480f8cb275077db5e01b9572ffd 281 TIGRFAM TIGR00478 tly: TlyA family rRNA methyltransferase/putative hemolysin 7 239 2.7E-95 T 13-10-2018 IPR004538 Haemolysin A /rRNA methyltransferase TlyA GO:0003723 COP00_06575 82fa9480f8cb275077db5e01b9572ffd 281 Gene3D G3DSA:3.10.290.10 2 64 6.4E-23 T 13-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 COP00_06575 82fa9480f8cb275077db5e01b9572ffd 281 SUPERFAMILY SSF53335 55 246 3.07E-20 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase COP00_06575 82fa9480f8cb275077db5e01b9572ffd 281 Pfam PF01728 FtsJ-like methyltransferase 62 244 3.5E-17 T 13-10-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 COP00_06575 82fa9480f8cb275077db5e01b9572ffd 281 SMART SM00363 6 71 5.6E-8 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 COP00_15470 2143cb0ff94531b96935ae0b26f2d85c 243 SUPERFAMILY SSF48008 86 226 4.18E-20 T 13-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal COP00_15470 2143cb0ff94531b96935ae0b26f2d85c 243 Pfam PF00392 Bacterial regulatory proteins, gntR family 22 80 2.8E-17 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 COP00_15470 2143cb0ff94531b96935ae0b26f2d85c 243 SMART SM00895 90 219 8.3E-7 T 13-10-2018 IPR011711 GntR, C-terminal COP00_15470 2143cb0ff94531b96935ae0b26f2d85c 243 Pfam PF07729 FCD domain 90 208 1.9E-15 T 13-10-2018 IPR011711 GntR, C-terminal COP00_15470 2143cb0ff94531b96935ae0b26f2d85c 243 SMART SM00345 23 81 2.1E-18 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 COP00_15470 2143cb0ff94531b96935ae0b26f2d85c 243 SUPERFAMILY SSF46785 14 84 3.6E-13 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_15470 2143cb0ff94531b96935ae0b26f2d85c 243 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 41 55 3.8E-5 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 COP00_15470 2143cb0ff94531b96935ae0b26f2d85c 243 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 55 71 3.8E-5 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 COP00_15470 2143cb0ff94531b96935ae0b26f2d85c 243 Gene3D G3DSA:1.10.10.10 17 81 3.5E-15 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_15470 2143cb0ff94531b96935ae0b26f2d85c 243 Gene3D G3DSA:1.20.120.530 84 223 3.1E-17 T 13-10-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal COP00_07355 366feee598299285605fe9ad136382bb 88 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 86 3.9E-31 T 13-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 COP00_07355 366feee598299285605fe9ad136382bb 88 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 16.737 T 13-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 COP00_07355 366feee598299285605fe9ad136382bb 88 Gene3D G3DSA:1.20.58.110 1 87 9.4E-29 T 13-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 COP00_07355 366feee598299285605fe9ad136382bb 88 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 14 88 1.0E-17 T 13-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 COP00_07355 366feee598299285605fe9ad136382bb 88 Pfam PF01649 Ribosomal protein S20 2 84 1.3E-27 T 13-10-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 COP00_07355 366feee598299285605fe9ad136382bb 88 SUPERFAMILY SSF46992 3 86 3.4E-28 T 13-10-2018 IPR036510 Ribosomal protein S20 superfamily GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 COP00_12910 f3e38690ce6cf8d0629e58448d838b18 313 Pfam PF07670 Nucleoside recognition 17 101 1.2E-8 T 13-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 COP00_12910 f3e38690ce6cf8d0629e58448d838b18 313 Pfam PF07670 Nucleoside recognition 175 262 6.4E-7 T 13-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 COP00_24115 e6cc579ff2087f479d99c4f4a26f5e17 165 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 78 158 5.6E-34 T 13-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 COP00_24115 e6cc579ff2087f479d99c4f4a26f5e17 165 Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain 3 74 9.7E-8 T 13-10-2018 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 COP00_24115 e6cc579ff2087f479d99c4f4a26f5e17 165 Hamap MF_00772 Methylated-DNA--protein-cysteine methyltransferase [ogt]. 6 159 35.393 T 13-10-2018 IPR023546 Methylated-DNA--protein-cysteine methyltransferase GO:0003824|GO:0006281 COP00_24115 e6cc579ff2087f479d99c4f4a26f5e17 165 SUPERFAMILY SSF46767 77 160 6.02E-29 T 13-10-2018 IPR036217 Methylated DNA-protein cysteine methyltransferase, DNA binding domain Reactome: R-HSA-5657655 COP00_24115 e6cc579ff2087f479d99c4f4a26f5e17 165 Gene3D G3DSA:3.30.160.70 1 73 2.1E-13 T 13-10-2018 COP00_24115 e6cc579ff2087f479d99c4f4a26f5e17 165 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 80 159 9.5E-29 T 13-10-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 COP00_24115 e6cc579ff2087f479d99c4f4a26f5e17 165 Gene3D G3DSA:1.10.10.10 75 160 1.9E-32 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_24115 e6cc579ff2087f479d99c4f4a26f5e17 165 SUPERFAMILY SSF53155 4 83 2.75E-12 T 13-10-2018 IPR036631 Methylated DNA-protein cysteine methyltransferase domain superfamily GO:0003908|GO:0006281 Reactome: R-HSA-5657655 COP00_24115 e6cc579ff2087f479d99c4f4a26f5e17 165 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 128 134 - T 13-10-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 COP00_22290 06358a192bf94aefd3f151a7b77ef968 418 Pfam PF01435 Peptidase family M48 207 414 1.4E-38 T 13-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 COP00_22290 06358a192bf94aefd3f151a7b77ef968 418 Pfam PF16491 CAAX prenyl protease N-terminal, five membrane helices 32 203 2.7E-15 T 13-10-2018 IPR032456 CAAX prenyl protease 1, N-terminal KEGG: 00900+3.4.24.84 COP00_22290 06358a192bf94aefd3f151a7b77ef968 418 Gene3D G3DSA:3.30.2010.10 203 285 9.8E-27 T 13-10-2018 COP00_18355 927588cd22ebb7f901ad65801ce7f8a1 269 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 48 265 7.5E-57 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF COP00_18355 927588cd22ebb7f901ad65801ce7f8a1 269 SUPERFAMILY SSF53850 1 266 3.42E-63 T 13-10-2018 COP00_18355 927588cd22ebb7f901ad65801ce7f8a1 269 Gene3D G3DSA:3.40.190.10 130 227 3.1E-69 T 13-10-2018 COP00_18355 927588cd22ebb7f901ad65801ce7f8a1 269 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 71 84 - T 13-10-2018 IPR018313 Solute-binding protein family 3, conserved site COP00_18355 927588cd22ebb7f901ad65801ce7f8a1 269 SMART SM00062 47 266 2.0E-79 T 13-10-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF COP00_18355 927588cd22ebb7f901ad65801ce7f8a1 269 Gene3D G3DSA:3.40.190.10 46 258 3.1E-69 T 13-10-2018 COP00_22275 3613bc0636e1795e8d7e9b146dc7a155 183 Pfam PF07883 Cupin domain 110 174 3.8E-11 T 13-10-2018 IPR013096 Cupin 2, conserved barrel COP00_22275 3613bc0636e1795e8d7e9b146dc7a155 183 Pfam PF01381 Helix-turn-helix 12 64 1.3E-13 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 COP00_22275 3613bc0636e1795e8d7e9b146dc7a155 183 Gene3D G3DSA:2.60.120.10 92 183 4.6E-26 T 13-10-2018 IPR014710 RmlC-like jelly roll fold COP00_22275 3613bc0636e1795e8d7e9b146dc7a155 183 SMART SM00530 11 66 9.4E-13 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 COP00_22275 3613bc0636e1795e8d7e9b146dc7a155 183 SUPERFAMILY SSF47413 4 67 2.31E-16 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 COP00_22275 3613bc0636e1795e8d7e9b146dc7a155 183 Gene3D G3DSA:1.10.260.40 1 74 1.5E-18 T 13-10-2018 COP00_22275 3613bc0636e1795e8d7e9b146dc7a155 183 SUPERFAMILY SSF51182 59 183 3.37E-23 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily COP00_12765 39ba398663ced00cc2599b39d4226abd 327 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 5 319 1.2E-26 T 13-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 COP00_12765 39ba398663ced00cc2599b39d4226abd 327 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 149 177 - T 13-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 COP00_12765 39ba398663ced00cc2599b39d4226abd 327 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 108 288 1.8E-66 T 13-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 COP00_12765 39ba398663ced00cc2599b39d4226abd 327 SUPERFAMILY SSF51735 103 289 1.12E-58 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily COP00_12765 39ba398663ced00cc2599b39d4226abd 327 Gene3D G3DSA:3.40.50.720 5 315 1.7E-115 T 13-10-2018 COP00_12765 39ba398663ced00cc2599b39d4226abd 327 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 198 220 - T 13-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site COP00_12765 39ba398663ced00cc2599b39d4226abd 327 SUPERFAMILY SSF52283 1 133 9.57E-33 T 13-10-2018 COP00_12765 39ba398663ced00cc2599b39d4226abd 327 Gene3D G3DSA:3.40.50.720 97 289 1.7E-115 T 13-10-2018 COP00_10390 70a3409a160af9de155abd4246740b23 185 ProDom PD108804 YUFK TRANSMEMBRANE MEMBRANE PRECURSOR SIGNAL 1 184 1.0E-74 T 13-10-2018 IPR035289 Protein of unknown function DUF5366 COP00_10390 70a3409a160af9de155abd4246740b23 185 Pfam PF17328 Family of unknown function (DUF5366) 29 184 7.1E-63 T 13-10-2018 IPR035289 Protein of unknown function DUF5366 COP00_06300 c3acd9974e5df0a2c1baf25f40681f15 319 TIGRFAM TIGR00554 panK_bact: pantothenate kinase 11 318 1.4E-150 T 13-10-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 COP00_06300 c3acd9974e5df0a2c1baf25f40681f15 319 PIRSF PIRSF000545 2 319 2.8E-137 T 13-10-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 COP00_06300 c3acd9974e5df0a2c1baf25f40681f15 319 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 91 248 2.5E-15 T 13-10-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0016301 Reactome: R-HSA-73614 COP00_06300 c3acd9974e5df0a2c1baf25f40681f15 319 SUPERFAMILY SSF52540 11 317 1.66E-70 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_06300 c3acd9974e5df0a2c1baf25f40681f15 319 Gene3D G3DSA:3.40.50.300 2 319 8.6E-91 T 13-10-2018 COP00_06300 c3acd9974e5df0a2c1baf25f40681f15 319 Hamap MF_00215 Pantothenate kinase [coaA]. 1 319 153.652 T 13-10-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 COP00_04920 83576ed48ee8b8538b627d8938add007 296 Pfam PF07728 AAA domain (dynein-related subfamily) 59 196 8.4E-28 T 13-10-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 COP00_04920 83576ed48ee8b8538b627d8938add007 296 SUPERFAMILY SSF52540 44 278 2.06E-35 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_04920 83576ed48ee8b8538b627d8938add007 296 SMART SM00382 56 202 3.6E-6 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_04920 83576ed48ee8b8538b627d8938add007 296 Gene3D G3DSA:3.40.50.300 42 213 1.9E-34 T 13-10-2018 COP00_04920 83576ed48ee8b8538b627d8938add007 296 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 60 78 3.7E-5 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 COP00_04920 83576ed48ee8b8538b627d8938add007 296 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 132 150 3.7E-5 T 13-10-2018 IPR001270 ClpA/B family GO:0005524 COP00_21245 34a1b75c9d804fe7e25f9a390d7bd5bd 118 Hamap MF_01502 UPF0295 protein . 1 115 36.496 T 13-10-2018 IPR020912 Uncharacterised protein family UPF0295 GO:0005887 COP00_21245 34a1b75c9d804fe7e25f9a390d7bd5bd 118 Pfam PF11023 Zinc-ribbon containing domain 3 113 2.3E-60 T 13-10-2018 IPR020912 Uncharacterised protein family UPF0295 GO:0005887 COP00_21245 34a1b75c9d804fe7e25f9a390d7bd5bd 118 ProDom PD355753 MEMBRANE TRANSMEMBRANE UPF0295 BLI00901/BL05075 BT9727_0449 GK0479 BCE0593 YGZB PRECURSOR BA0538/GBAA0538/BAS0506 1 113 7.0E-59 T 13-10-2018 IPR020912 Uncharacterised protein family UPF0295 GO:0005887 COP00_19080 e0f74cf3e07a0c41359b2d14293371db 108 TIGRFAM TIGR00377 ant_ant_sig: anti-anti-sigma factor 2 105 1.5E-32 T 13-10-2018 IPR003658 Anti-sigma factor antagonist GO:0006355|GO:0045152 COP00_19080 e0f74cf3e07a0c41359b2d14293371db 108 Gene3D G3DSA:3.30.750.24 2 106 8.6E-25 T 13-10-2018 IPR036513 STAS domain superfamily COP00_19080 e0f74cf3e07a0c41359b2d14293371db 108 SUPERFAMILY SSF52091 5 101 8.44E-24 T 13-10-2018 IPR036513 STAS domain superfamily COP00_19080 e0f74cf3e07a0c41359b2d14293371db 108 Pfam PF01740 STAS domain 5 98 2.3E-17 T 13-10-2018 IPR002645 STAS domain COP00_10220 71e6faae0edbf912ba7ca89b2a863c45 272 Gene3D G3DSA:3.60.21.10 45 249 2.9E-26 T 13-10-2018 IPR029052 Metallo-dependent phosphatase-like COP00_10220 71e6faae0edbf912ba7ca89b2a863c45 272 SUPERFAMILY SSF56300 48 271 2.43E-33 T 13-10-2018 COP00_10220 71e6faae0edbf912ba7ca89b2a863c45 272 Pfam PF00149 Calcineurin-like phosphoesterase 47 210 7.5E-12 T 13-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 COP00_21665 2d8fe0b77ad8b05b298333974840c2b7 447 Pfam PF00202 Aminotransferase class-III 27 441 8.2E-104 T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 COP00_21665 2d8fe0b77ad8b05b298333974840c2b7 447 PIRSF PIRSF000521 8 446 1.6E-33 T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 COP00_21665 2d8fe0b77ad8b05b298333974840c2b7 447 SUPERFAMILY SSF53383 18 443 4.55E-119 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase COP00_21665 2d8fe0b77ad8b05b298333974840c2b7 447 Gene3D G3DSA:3.90.1150.10 14 443 2.2E-146 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 COP00_21665 2d8fe0b77ad8b05b298333974840c2b7 447 Gene3D G3DSA:3.40.640.10 66 336 2.2E-146 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 COP00_21665 2d8fe0b77ad8b05b298333974840c2b7 447 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 247 284 - T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 COP00_21805 30d208a6b30b78e902487f80d0f56969 283 SUPERFAMILY SSF46689 5 55 1.3E-7 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 COP00_21805 30d208a6b30b78e902487f80d0f56969 283 SUPERFAMILY SSF46689 57 110 9.86E-12 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 COP00_21805 30d208a6b30b78e902487f80d0f56969 283 Pfam PF06445 GyrI-like small molecule binding domain 128 282 2.5E-27 T 13-10-2018 IPR029442 GyrI-like small molecule binding domain COP00_21805 30d208a6b30b78e902487f80d0f56969 283 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 88 104 4.7E-6 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 COP00_21805 30d208a6b30b78e902487f80d0f56969 283 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 73 88 4.7E-6 T 13-10-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 COP00_21805 30d208a6b30b78e902487f80d0f56969 283 Pfam PF12833 Helix-turn-helix domain 28 104 3.4E-17 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 COP00_21805 30d208a6b30b78e902487f80d0f56969 283 Gene3D G3DSA:1.10.10.60 2 57 1.8E-13 T 13-10-2018 COP00_21805 30d208a6b30b78e902487f80d0f56969 283 SUPERFAMILY SSF55136 128 283 6.8E-27 T 13-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily COP00_21805 30d208a6b30b78e902487f80d0f56969 283 SMART SM00342 21 104 4.2E-26 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 COP00_21805 30d208a6b30b78e902487f80d0f56969 283 SMART SM00871 128 283 1.6E-27 T 13-10-2018 IPR010499 Bacterial transcription activator, effector binding COP00_21805 30d208a6b30b78e902487f80d0f56969 283 Gene3D G3DSA:1.10.10.60 58 117 9.7E-15 T 13-10-2018 COP00_21805 30d208a6b30b78e902487f80d0f56969 283 Gene3D G3DSA:3.20.80.10 128 283 1.0E-34 T 13-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily COP00_21805 30d208a6b30b78e902487f80d0f56969 283 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 58 100 - T 13-10-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 COP00_08320 2375e7c9b3a265c5374fc9db779def85 201 SUPERFAMILY SSF47781 62 133 7.31E-21 T 13-10-2018 IPR010994 RuvA domain 2-like COP00_08320 2375e7c9b3a265c5374fc9db779def85 201 Pfam PF14520 Helix-hairpin-helix domain 69 126 1.2E-14 T 13-10-2018 COP00_08320 2375e7c9b3a265c5374fc9db779def85 201 SUPERFAMILY SSF50249 1 60 4.91E-14 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold COP00_08320 2375e7c9b3a265c5374fc9db779def85 201 Gene3D G3DSA:1.10.150.20 64 138 6.8E-24 T 13-10-2018 COP00_08320 2375e7c9b3a265c5374fc9db779def85 201 SUPERFAMILY SSF46929 154 199 3.79E-9 T 13-10-2018 IPR036267 RuvA, C-terminal domain superfamily COP00_08320 2375e7c9b3a265c5374fc9db779def85 201 SMART SM00278 70 89 0.44 T 13-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 COP00_08320 2375e7c9b3a265c5374fc9db779def85 201 SMART SM00278 105 124 0.7 T 13-10-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 COP00_08320 2375e7c9b3a265c5374fc9db779def85 201 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 200 1.3E-63 T 13-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 COP00_08320 2375e7c9b3a265c5374fc9db779def85 201 Pfam PF01330 RuvA N terminal domain 2 59 4.3E-19 T 13-10-2018 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 COP00_08320 2375e7c9b3a265c5374fc9db779def85 201 Gene3D G3DSA:2.40.50.140 1 63 6.4E-17 T 13-10-2018 COP00_08320 2375e7c9b3a265c5374fc9db779def85 201 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 200 29.532 T 13-10-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 COP00_08320 2375e7c9b3a265c5374fc9db779def85 201 Pfam PF07499 RuvA, C-terminal domain 155 199 1.2E-12 T 13-10-2018 IPR011114 Holliday junction DNA helicase RuvA, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 COP00_08320 2375e7c9b3a265c5374fc9db779def85 201 Gene3D G3DSA:1.10.8.10 152 199 3.2E-7 T 13-10-2018 COP00_16850 91677929bdecce1b0e31110b95dffa82 145 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 6 142 8.7E-67 T 13-10-2018 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_16850 91677929bdecce1b0e31110b95dffa82 145 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 16 144 28.72 T 13-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 COP00_16850 91677929bdecce1b0e31110b95dffa82 145 PIRSF PIRSF002181 1 143 1.1E-50 T 13-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 COP00_16850 91677929bdecce1b0e31110b95dffa82 145 SUPERFAMILY SSF52161 6 143 1.31E-59 T 13-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 COP00_16850 91677929bdecce1b0e31110b95dffa82 145 ProSitePatterns PS00783 Ribosomal protein L13 signature. 106 128 - T 13-10-2018 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 COP00_16850 91677929bdecce1b0e31110b95dffa82 145 Pfam PF00572 Ribosomal protein L13 15 139 5.4E-58 T 13-10-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 COP00_16850 91677929bdecce1b0e31110b95dffa82 145 Gene3D G3DSA:3.90.1180.10 1 143 1.3E-61 T 13-10-2018 IPR036899 Ribosomal protein L13 superfamily GO:0003735|GO:0005840|GO:0006412 COP00_00840 ef6c515f8d309a2fee02fb4e58304b7a 324 Pfam PF00953 Glycosyl transferase family 4 82 248 3.4E-38 T 13-10-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193|Reactome: R-HSA-4549356 COP00_00840 ef6c515f8d309a2fee02fb4e58304b7a 324 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 5 322 24.723 T 13-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 COP00_00840 ef6c515f8d309a2fee02fb4e58304b7a 324 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 48 60 1.4E-5 T 13-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 COP00_00840 ef6c515f8d309a2fee02fb4e58304b7a 324 ProSitePatterns PS01347 MraY family signature 1. 48 60 - T 13-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 COP00_00840 ef6c515f8d309a2fee02fb4e58304b7a 324 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 17 323 3.5E-128 T 13-10-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 COP00_00840 ef6c515f8d309a2fee02fb4e58304b7a 324 ProSitePatterns PS01348 MraY family signature 2. 168 179 - T 13-10-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 COP00_11815 e118b8aec8177fd0bf59b7adb27cf916 289 Pfam PF09681 N-terminal phage replisome organiser (Phage_rep_org_N) 6 125 6.1E-50 T 13-10-2018 IPR010056 Phage replisome organiser, N-terminal domain COP00_11815 e118b8aec8177fd0bf59b7adb27cf916 289 TIGRFAM TIGR01714 phage_rep_org_N: phage replisome organizer, putative, N-terminal region 6 125 6.7E-44 T 13-10-2018 IPR010056 Phage replisome organiser, N-terminal domain COP00_11815 e118b8aec8177fd0bf59b7adb27cf916 289 Pfam PF09524 Conserved phage C-terminus (Phg_2220_C) 185 256 6.7E-29 T 13-10-2018 IPR011741 Phage conserved hypothetical protein, C-terminal COP00_11815 e118b8aec8177fd0bf59b7adb27cf916 289 TIGRFAM TIGR02220 phg_TIGR02220: phage conserved hypothetical protein, C-terminal domain 182 257 8.0E-32 T 13-10-2018 IPR011741 Phage conserved hypothetical protein, C-terminal COP00_00545 21cbccc1dce6b5a65ead47092c42fdfa 223 Gene3D G3DSA:1.20.120.570 27 213 1.8E-48 T 13-10-2018 IPR036785 YkyA-like superfamily COP00_00545 21cbccc1dce6b5a65ead47092c42fdfa 223 SUPERFAMILY SSF140423 25 214 7.19E-56 T 13-10-2018 IPR036785 YkyA-like superfamily COP00_00545 21cbccc1dce6b5a65ead47092c42fdfa 223 Pfam PF10368 Putative cell-wall binding lipoprotein 16 216 1.1E-68 T 13-10-2018 IPR019454 Putative cell-wall binding lipoprotein YkyA-like COP00_10710 399db0e58f4bac26e7ec783a67ec352e 78 Pfam PF07293 Protein of unknown function (DUF1450) 2 75 2.0E-36 T 13-10-2018 IPR009910 Protein of unknown function DUF1450 COP00_10710 399db0e58f4bac26e7ec783a67ec352e 78 Hamap MF_01542 UPF0349 protein . 1 77 29.346 T 13-10-2018 IPR022916 Protein of unknown function UPF0349 COP00_10710 399db0e58f4bac26e7ec783a67ec352e 78 ProDom PD058324 UPF0349 LMO2392 BLI03401/BL03152 SA0800 SAR0901 LIN2491 SERP0525 GK2958 BT9727_4649 BC4937 1 77 5.0E-35 T 13-10-2018 COP00_04145 10322f4c9b7bba54808af3134bafbd06 255 SUPERFAMILY SSF102114 22 223 1.84E-22 T 13-10-2018 COP00_04145 10322f4c9b7bba54808af3134bafbd06 255 Pfam PF04055 Radical SAM superfamily 23 184 1.4E-28 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 COP00_04145 10322f4c9b7bba54808af3134bafbd06 255 ProSitePatterns PS01087 Radical activating enzymes signature. 17 38 - T 13-10-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 COP00_04145 10322f4c9b7bba54808af3134bafbd06 255 TIGRFAM TIGR02493 PFLA: pyruvate formate-lyase 1-activating enzyme 5 240 4.7E-99 T 13-10-2018 IPR012838 Pyruvate formate-lyase 1 activating enzyme GO:0043365|GO:0055114 COP00_04145 10322f4c9b7bba54808af3134bafbd06 255 Gene3D G3DSA:3.20.20.70 1 246 9.6E-94 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 COP00_04145 10322f4c9b7bba54808af3134bafbd06 255 Pfam PF13353 4Fe-4S single cluster domain 15 144 1.4E-21 T 13-10-2018 COP00_04145 10322f4c9b7bba54808af3134bafbd06 255 PIRSF PIRSF000371 41 246 1.9E-48 T 13-10-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 COP00_04145 10322f4c9b7bba54808af3134bafbd06 255 PIRSF PIRSF000371 1 46 5.0E-13 T 13-10-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 COP00_11920 51ff7fc616582046efb3ec85c190f401 134 Pfam PF01381 Helix-turn-helix 10 63 3.7E-15 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 COP00_11920 51ff7fc616582046efb3ec85c190f401 134 SUPERFAMILY SSF47413 2 68 1.0E-17 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 COP00_11920 51ff7fc616582046efb3ec85c190f401 134 SMART SM00530 9 65 5.0E-15 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 COP00_11920 51ff7fc616582046efb3ec85c190f401 134 Gene3D G3DSA:1.10.260.40 2 68 1.1E-18 T 13-10-2018 COP00_18840 b4474a8e19319749817ad8e6e56efe87 119 TIGRFAM TIGR01803 CM-like: chorismate mutase related enzymes 9 90 1.7E-26 T 13-10-2018 IPR008241 Salicylate biosynthesis protein PchB GO:0004106|GO:0009697|GO:0016835 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6406|MetaCyc: PWY-6627|MetaCyc: PWY-7626 COP00_18840 b4474a8e19319749817ad8e6e56efe87 119 Pfam PF01817 Chorismate mutase type II 13 90 5.2E-16 T 13-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 COP00_18840 b4474a8e19319749817ad8e6e56efe87 119 SUPERFAMILY SSF48600 7 87 6.87E-20 T 13-10-2018 IPR036263 Chorismate mutase type II superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 COP00_18840 b4474a8e19319749817ad8e6e56efe87 119 SMART SM00830 13 93 9.9E-19 T 13-10-2018 IPR002701 Chorismate mutase II, prokaryotic-type GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 COP00_18840 b4474a8e19319749817ad8e6e56efe87 119 Gene3D G3DSA:1.20.59.10 1 109 2.6E-28 T 13-10-2018 IPR036979 Chorismate mutase domain superfamily GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 COP00_00685 1440f94310287e2ec7075f4810f0561e 308 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 81 103 - T 13-10-2018 IPR030470 UbiA prenyltransferase conserved site COP00_00685 1440f94310287e2ec7075f4810f0561e 308 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 21 304 18.349 T 13-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 COP00_00685 1440f94310287e2ec7075f4810f0561e 308 Pfam PF01040 UbiA prenyltransferase family 38 288 5.2E-59 T 13-10-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 COP00_00685 1440f94310287e2ec7075f4810f0561e 308 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 23 301 9.8E-98 T 13-10-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 COP00_00685 1440f94310287e2ec7075f4810f0561e 308 Gene3D G3DSA:1.10.357.140 28 189 1.2E-19 T 13-10-2018 COP00_15325 a7fb3559f5adbf102b26b35fcbb95de4 626 PIRSF PIRSF002583 1 626 1.8E-201 T 13-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 COP00_15325 a7fb3559f5adbf102b26b35fcbb95de4 626 SMART SM00387 24 177 0.0099 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase COP00_15325 a7fb3559f5adbf102b26b35fcbb95de4 626 SUPERFAMILY SSF110942 512 625 4.84E-28 T 13-10-2018 IPR037196 HSP90, C-terminal domain COP00_15325 a7fb3559f5adbf102b26b35fcbb95de4 626 PRINTS PR00775 90kDa heat shock protein signature 188 206 3.3E-53 T 13-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal COP00_15325 a7fb3559f5adbf102b26b35fcbb95de4 626 PRINTS PR00775 90kDa heat shock protein signature 165 182 3.3E-53 T 13-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal COP00_15325 a7fb3559f5adbf102b26b35fcbb95de4 626 PRINTS PR00775 90kDa heat shock protein signature 90 107 3.3E-53 T 13-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal COP00_15325 a7fb3559f5adbf102b26b35fcbb95de4 626 PRINTS PR00775 90kDa heat shock protein signature 72 89 3.3E-53 T 13-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal COP00_15325 a7fb3559f5adbf102b26b35fcbb95de4 626 PRINTS PR00775 90kDa heat shock protein signature 2 22 3.3E-53 T 13-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal COP00_15325 a7fb3559f5adbf102b26b35fcbb95de4 626 PRINTS PR00775 90kDa heat shock protein signature 23 45 3.3E-53 T 13-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal COP00_15325 a7fb3559f5adbf102b26b35fcbb95de4 626 PRINTS PR00775 90kDa heat shock protein signature 115 137 3.3E-53 T 13-10-2018 IPR020575 Heat shock protein Hsp90, N-terminal COP00_15325 a7fb3559f5adbf102b26b35fcbb95de4 626 Gene3D G3DSA:3.40.50.11260 408 494 7.6E-27 T 13-10-2018 COP00_15325 a7fb3559f5adbf102b26b35fcbb95de4 626 SUPERFAMILY SSF54211 236 488 1.97E-81 T 13-10-2018 IPR020568 Ribosomal protein S5 domain 2-type fold COP00_15325 a7fb3559f5adbf102b26b35fcbb95de4 626 Gene3D G3DSA:1.20.120.790 495 626 1.3E-33 T 13-10-2018 IPR037196 HSP90, C-terminal domain COP00_15325 a7fb3559f5adbf102b26b35fcbb95de4 626 Gene3D G3DSA:3.30.565.10 1 228 1.9E-73 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily COP00_15325 a7fb3559f5adbf102b26b35fcbb95de4 626 Hamap MF_00505 Chaperone protein HtpG [htpG]. 2 626 26.639 T 13-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 COP00_15325 a7fb3559f5adbf102b26b35fcbb95de4 626 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 26 149 3.2E-13 T 13-10-2018 COP00_15325 a7fb3559f5adbf102b26b35fcbb95de4 626 SUPERFAMILY SSF55874 2 210 4.02E-62 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily COP00_15325 a7fb3559f5adbf102b26b35fcbb95de4 626 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 22 31 - T 13-10-2018 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0051082 COP00_15325 a7fb3559f5adbf102b26b35fcbb95de4 626 Gene3D G3DSA:3.30.230.80 235 407 3.2E-54 T 13-10-2018 COP00_15325 a7fb3559f5adbf102b26b35fcbb95de4 626 Pfam PF00183 Hsp90 protein 221 625 8.9E-108 T 13-10-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0051082 COP00_20955 e955e3d424c06c66ab6b601179a03b90 457 Pfam PF02378 Phosphotransferase system, EIIC 107 393 3.9E-41 T 13-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 COP00_20955 e955e3d424c06c66ab6b601179a03b90 457 SUPERFAMILY SSF55604 5 80 1.44E-17 T 13-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 COP00_20955 e955e3d424c06c66ab6b601179a03b90 457 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 19 36 - T 13-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 COP00_20955 e955e3d424c06c66ab6b601179a03b90 457 TIGRFAM TIGR01996 PTS-II-BC-sucr: PTS system, sucrose-specific IIBC component 3 449 1.1E-172 T 13-10-2018 IPR010973 Phosphotransferase system, sucrose-specific IIBC component GO:0008982|GO:0009401|GO:0016021 COP00_20955 e955e3d424c06c66ab6b601179a03b90 457 Pfam PF00367 phosphotransferase system, EIIB 8 41 5.3E-13 T 13-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 COP00_20955 e955e3d424c06c66ab6b601179a03b90 457 Gene3D G3DSA:3.30.1360.60 1 78 9.8E-22 T 13-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 COP00_14995 5a84138b5e084e5df1d3f58b47efa77a 411 Gene3D G3DSA:1.20.1250.20 198 395 1.1E-65 T 13-10-2018 COP00_14995 5a84138b5e084e5df1d3f58b47efa77a 411 TIGRFAM TIGR00882 2A0105: oligosaccharide:H+ symporter 8 393 9.5E-140 T 13-10-2018 IPR000576 LacY/RafB permease family GO:0005351|GO:0008643|GO:0016020 COP00_14995 5a84138b5e084e5df1d3f58b47efa77a 411 SUPERFAMILY SSF103473 8 397 1.24E-41 T 13-10-2018 IPR036259 MFS transporter superfamily COP00_14995 5a84138b5e084e5df1d3f58b47efa77a 411 Gene3D G3DSA:1.20.1250.20 6 197 1.4E-39 T 13-10-2018 COP00_14995 5a84138b5e084e5df1d3f58b47efa77a 411 PRINTS PR00174 LacY proton/sugar symporter family signature 253 274 1.2E-86 T 13-10-2018 IPR000576 LacY/RafB permease family GO:0005351|GO:0008643|GO:0016020 COP00_14995 5a84138b5e084e5df1d3f58b47efa77a 411 PRINTS PR00174 LacY proton/sugar symporter family signature 102 124 1.2E-86 T 13-10-2018 IPR000576 LacY/RafB permease family GO:0005351|GO:0008643|GO:0016020 COP00_14995 5a84138b5e084e5df1d3f58b47efa77a 411 PRINTS PR00174 LacY proton/sugar symporter family signature 67 96 1.2E-86 T 13-10-2018 IPR000576 LacY/RafB permease family GO:0005351|GO:0008643|GO:0016020 COP00_14995 5a84138b5e084e5df1d3f58b47efa77a 411 PRINTS PR00174 LacY proton/sugar symporter family signature 207 235 1.2E-86 T 13-10-2018 IPR000576 LacY/RafB permease family GO:0005351|GO:0008643|GO:0016020 COP00_14995 5a84138b5e084e5df1d3f58b47efa77a 411 PRINTS PR00174 LacY proton/sugar symporter family signature 277 303 1.2E-86 T 13-10-2018 IPR000576 LacY/RafB permease family GO:0005351|GO:0008643|GO:0016020 COP00_14995 5a84138b5e084e5df1d3f58b47efa77a 411 PRINTS PR00174 LacY proton/sugar symporter family signature 339 359 1.2E-86 T 13-10-2018 IPR000576 LacY/RafB permease family GO:0005351|GO:0008643|GO:0016020 COP00_14995 5a84138b5e084e5df1d3f58b47efa77a 411 PRINTS PR00174 LacY proton/sugar symporter family signature 144 162 1.2E-86 T 13-10-2018 IPR000576 LacY/RafB permease family GO:0005351|GO:0008643|GO:0016020 COP00_14995 5a84138b5e084e5df1d3f58b47efa77a 411 PRINTS PR00174 LacY proton/sugar symporter family signature 308 327 1.2E-86 T 13-10-2018 IPR000576 LacY/RafB permease family GO:0005351|GO:0008643|GO:0016020 COP00_14995 5a84138b5e084e5df1d3f58b47efa77a 411 Pfam PF01306 LacY proton/sugar symporter 7 400 1.1E-138 T 13-10-2018 IPR000576 LacY/RafB permease family GO:0005351|GO:0008643|GO:0016020 COP00_15195 8902d5962f42394871ed233232b69fb3 315 Pfam PF04198 Putative sugar-binding domain 57 311 2.3E-81 T 13-10-2018 IPR007324 Sugar-binding domain, putative GO:0030246 COP00_15195 8902d5962f42394871ed233232b69fb3 315 SUPERFAMILY SSF88659 13 47 9.16E-7 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like COP00_15195 8902d5962f42394871ed233232b69fb3 315 Pfam PF13384 Homeodomain-like domain 11 42 8.5E-6 T 13-10-2018 COP00_15195 8902d5962f42394871ed233232b69fb3 315 Gene3D G3DSA:1.10.10.60 1 51 1.7E-20 T 13-10-2018 COP00_15195 8902d5962f42394871ed233232b69fb3 315 SUPERFAMILY SSF100950 56 311 1.95E-76 T 13-10-2018 IPR037171 NagB/RpiA transferase-like COP00_15195 8902d5962f42394871ed233232b69fb3 315 Gene3D G3DSA:3.40.50.1360 52 311 3.2E-87 T 13-10-2018 COP00_09240 284c6282bc5cc0924a89228b5fd491c5 266 Gene3D G3DSA:3.40.50.10330 33 266 2.5E-76 T 13-10-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, N-terminal GO:0003951 COP00_09240 284c6282bc5cc0924a89228b5fd491c5 266 Hamap MF_00361 NAD kinase [nadK]. 5 266 20.947 T 13-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 COP00_09240 284c6282bc5cc0924a89228b5fd491c5 266 SUPERFAMILY SSF111331 14 265 5.56E-59 T 13-10-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain superfamily COP00_09240 284c6282bc5cc0924a89228b5fd491c5 266 Gene3D G3DSA:2.60.200.30 108 244 2.5E-76 T 13-10-2018 IPR017437 ATP-NAD kinase, PpnK-type, C-terminal GO:0003951|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 COP00_09240 284c6282bc5cc0924a89228b5fd491c5 266 Pfam PF01513 ATP-NAD kinase 39 219 8.1E-18 T 13-10-2018 IPR002504 NAD kinase GO:0003951|GO:0006741 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 COP00_11070 61ad755385d14bc5cd226c953481deaf 351 Pfam PF01032 FecCD transport family 33 347 7.3E-92 T 13-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 COP00_11070 61ad755385d14bc5cd226c953481deaf 351 Gene3D G3DSA:1.10.3470.10 20 351 8.5E-96 T 13-10-2018 IPR037294 ABC transporter, BtuC-like COP00_11070 61ad755385d14bc5cd226c953481deaf 351 SUPERFAMILY SSF81345 20 347 4.97E-82 T 13-10-2018 IPR037294 ABC transporter, BtuC-like COP00_08605 f4e763f3e1b18263621b6957d4b818fe 370 Gene3D G3DSA:3.40.718.10 2 370 5.3E-153 T 13-10-2018 COP00_08605 f4e763f3e1b18263621b6957d4b818fe 370 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 244 263 - T 13-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 COP00_08605 f4e763f3e1b18263621b6957d4b818fe 370 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 4 349 8.6E-168 T 13-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 COP00_08605 f4e763f3e1b18263621b6957d4b818fe 370 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 5 351 3.0E-140 T 13-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 COP00_08605 f4e763f3e1b18263621b6957d4b818fe 370 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 3 356 50.393 T 13-10-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 COP00_08605 f4e763f3e1b18263621b6957d4b818fe 370 SUPERFAMILY SSF53659 4 356 5.91E-122 T 13-10-2018 COP00_08605 f4e763f3e1b18263621b6957d4b818fe 370 SMART SM01329 4 352 7.6E-199 T 13-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 COP00_23025 5115fe4e7ee6378772559a8bbcd3cb48 128 Pfam PF07552 Spore Coat Protein X and V domain 6 63 2.2E-12 T 13-10-2018 IPR011428 Spore coat protein X/V GO:0030435|GO:0031160 COP00_23025 5115fe4e7ee6378772559a8bbcd3cb48 128 Pfam PF07552 Spore Coat Protein X and V domain 72 127 1.4E-11 T 13-10-2018 IPR011428 Spore coat protein X/V GO:0030435|GO:0031160 COP00_12895 77a8400aa128a897d2e7737467f772c8 221 Gene3D G3DSA:2.160.20.10 20 217 1.7E-70 T 13-10-2018 IPR012334 Pectin lyase fold COP00_12895 77a8400aa128a897d2e7737467f772c8 221 Pfam PF03211 Pectate lyase 21 210 1.1E-59 T 13-10-2018 IPR004898 Pectate lyase PlyH/PlyE-like GO:0005576|GO:0030570 KEGG: 00040+4.2.2.2 COP00_12895 77a8400aa128a897d2e7737467f772c8 221 SUPERFAMILY SSF51126 29 210 8.29E-61 T 13-10-2018 IPR011050 Pectin lyase fold/virulence factor COP00_19990 7422052b71e2810deb6c4883dfb67d08 411 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 1 245 2.4E-56 T 13-10-2018 IPR014030 Beta-ketoacyl synthase, N-terminal COP00_19990 7422052b71e2810deb6c4883dfb67d08 411 Gene3D G3DSA:3.40.47.10 255 399 6.3E-50 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 COP00_19990 7422052b71e2810deb6c4883dfb67d08 411 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 2 408 3.1E-171 T 13-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 COP00_19990 7422052b71e2810deb6c4883dfb67d08 411 SUPERFAMILY SSF53901 1 249 1.66E-71 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 COP00_19990 7422052b71e2810deb6c4883dfb67d08 411 SMART SM00825 Beta-ketoacyl synthase 4 411 1.4E-14 T 13-10-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain COP00_19990 7422052b71e2810deb6c4883dfb67d08 411 Gene3D G3DSA:3.40.47.10 1 253 2.0E-86 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 COP00_19990 7422052b71e2810deb6c4883dfb67d08 411 PIRSF PIRSF000447 1 411 2.1E-164 T 13-10-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 COP00_19990 7422052b71e2810deb6c4883dfb67d08 411 SUPERFAMILY SSF53901 214 410 2.73E-67 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 COP00_19990 7422052b71e2810deb6c4883dfb67d08 411 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 254 367 3.2E-33 T 13-10-2018 IPR014031 Beta-ketoacyl synthase, C-terminal COP00_09690 eb3593c837ebd05e0f8266b6e86d547c 322 TIGRFAM TIGR01212 TIGR01212: radical SAM protein, TIGR01212 family 15 314 1.4E-140 T 13-10-2018 IPR005911 Protein YhcC-like GO:0051536 COP00_09690 eb3593c837ebd05e0f8266b6e86d547c 322 Pfam PF16199 Radical_SAM C-terminal domain 220 303 2.0E-25 T 13-10-2018 IPR032432 Radical SAM, C-terminal extension Reactome: R-HSA-3214847 COP00_09690 eb3593c837ebd05e0f8266b6e86d547c 322 Pfam PF04055 Radical SAM superfamily 52 214 1.6E-13 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 COP00_09690 eb3593c837ebd05e0f8266b6e86d547c 322 Gene3D G3DSA:3.20.20.70 46 266 1.5E-14 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 COP00_09690 eb3593c837ebd05e0f8266b6e86d547c 322 SUPERFAMILY SSF102114 4 314 9.03E-56 T 13-10-2018 COP00_09690 eb3593c837ebd05e0f8266b6e86d547c 322 SMART SM00729 32 259 1.5E-45 T 13-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 COP00_16785 12e25c97319d4aaeaf99730812b95edf 217 Pfam PF05191 Adenylate kinase, active site lid 127 162 3.8E-19 T 13-10-2018 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 COP00_16785 12e25c97319d4aaeaf99730812b95edf 217 Gene3D G3DSA:3.40.50.300 1 214 5.3E-84 T 13-10-2018 COP00_16785 12e25c97319d4aaeaf99730812b95edf 217 PRINTS PR00094 Adenylate kinase signature 177 191 1.5E-32 T 13-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 COP00_16785 12e25c97319d4aaeaf99730812b95edf 217 PRINTS PR00094 Adenylate kinase signature 32 46 1.5E-32 T 13-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 COP00_16785 12e25c97319d4aaeaf99730812b95edf 217 PRINTS PR00094 Adenylate kinase signature 160 175 1.5E-32 T 13-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 COP00_16785 12e25c97319d4aaeaf99730812b95edf 217 PRINTS PR00094 Adenylate kinase signature 4 17 1.5E-32 T 13-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 COP00_16785 12e25c97319d4aaeaf99730812b95edf 217 PRINTS PR00094 Adenylate kinase signature 81 97 1.5E-32 T 13-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 COP00_16785 12e25c97319d4aaeaf99730812b95edf 217 SUPERFAMILY SSF52540 1 212 1.05E-46 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_16785 12e25c97319d4aaeaf99730812b95edf 217 Hamap MF_00235 Adenylate kinase [adk]. 1 213 53.815 T 13-10-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 COP00_16785 12e25c97319d4aaeaf99730812b95edf 217 TIGRFAM TIGR01351 adk: adenylate kinase 2 212 2.0E-81 T 13-10-2018 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 COP00_16785 12e25c97319d4aaeaf99730812b95edf 217 Pfam PF00406 Adenylate kinase 5 190 5.6E-60 T 13-10-2018 COP00_16785 12e25c97319d4aaeaf99730812b95edf 217 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 13-10-2018 IPR033690 Adenylate kinase, conserved site KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 COP00_23130 63964e90bf7fd0e5e9cf9d2acf86046b 128 Pfam PF10794 Protein of unknown function (DUF2606) 8 121 1.6E-10 T 13-10-2018 IPR019730 Protein of unknown function DUF2606 COP00_22545 91b1cc25b50f6171197969f8c7f43977 122 Hamap MF_01536 UPF0344 protein . 1 122 16.146 T 13-10-2018 IPR010899 Protein of unknown function UPF0344 COP00_22545 91b1cc25b50f6171197969f8c7f43977 122 Pfam PF07457 Protein of unknown function (DUF1516) 2 112 3.4E-31 T 13-10-2018 IPR010899 Protein of unknown function UPF0344 COP00_22545 91b1cc25b50f6171197969f8c7f43977 122 ProDom PD067392 MEMBRANE UPF0344 TRANSMEMBRANE MW0851 BCE1257 SIMILAR YISL SAR0931 BCE33L1051 BT9727_1053 1 122 4.0E-35 T 13-10-2018 IPR010899 Protein of unknown function UPF0344 COP00_01135 5378ab5b7112816a385d565d473da3cc 254 SMART SM00331 7 243 8.7E-67 T 13-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 COP00_01135 5378ab5b7112816a385d565d473da3cc 254 SMART SM00332 1 241 8.0E-36 T 13-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 COP00_01135 5378ab5b7112816a385d565d473da3cc 254 SUPERFAMILY SSF81606 2 243 5.36E-68 T 13-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 COP00_01135 5378ab5b7112816a385d565d473da3cc 254 Gene3D G3DSA:3.60.40.10 1 245 5.2E-76 T 13-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 COP00_01135 5378ab5b7112816a385d565d473da3cc 254 Pfam PF13672 Protein phosphatase 2C 14 232 1.3E-21 T 13-10-2018 COP00_04955 a39f490ab21d917d0fe7d61bae5d5710 310 SUPERFAMILY SSF103481 193 291 2.09E-8 T 13-10-2018 COP00_04955 a39f490ab21d917d0fe7d61bae5d5710 310 Pfam PF00892 EamA-like transporter family 8 147 1.6E-12 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 COP00_04955 a39f490ab21d917d0fe7d61bae5d5710 310 Pfam PF00892 EamA-like transporter family 157 287 8.0E-9 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 COP00_04955 a39f490ab21d917d0fe7d61bae5d5710 310 SUPERFAMILY SSF103481 42 149 2.09E-12 T 13-10-2018 COP00_04955 a39f490ab21d917d0fe7d61bae5d5710 310 TIGRFAM TIGR00688 rarD: protein RarD 8 265 3.0E-98 T 13-10-2018 IPR004626 RarD protein GO:0005887 COP00_08490 d9e0559e0eae614e742f5ab16082eb49 340 SUPERFAMILY SSF110997 186 244 4.32E-6 T 13-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 COP00_08490 d9e0559e0eae614e742f5ab16082eb49 340 Pfam PF05036 Sporulation related domain 186 229 4.3E-6 T 13-10-2018 IPR007730 Sporulation-like domain GO:0042834 COP00_08490 d9e0559e0eae614e742f5ab16082eb49 340 Gene3D G3DSA:3.30.70.1070 187 253 1.3E-7 T 13-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 COP00_16235 21a0cde1cdbc531ea0bdb4e77ad1de66 293 PIRSF PIRSF011575 2 291 1.7E-129 T 13-10-2018 IPR008764 Peptidase U57, YabG COP00_16235 21a0cde1cdbc531ea0bdb4e77ad1de66 293 ProDom PD127708 YABG PROTEASE SPORULATION-SPECIFIC PEPTIDASE U57 BH0058 ORTHOLOG SPORE FAMILY B.SUBTILIS 4 283 2.0E-148 T 13-10-2018 IPR008764 Peptidase U57, YabG COP00_16235 21a0cde1cdbc531ea0bdb4e77ad1de66 293 TIGRFAM TIGR02855 spore_yabG: sporulation peptidase YabG 4 287 4.1E-142 T 13-10-2018 IPR008764 Peptidase U57, YabG COP00_16235 21a0cde1cdbc531ea0bdb4e77ad1de66 293 Pfam PF05582 YabG peptidase U57 4 286 1.3E-116 T 13-10-2018 IPR008764 Peptidase U57, YabG COP00_22965 0546f0354f4e35281149e4f61806c4b0 205 Pfam PF02581 Thiamine monophosphate synthase 5 179 7.9E-36 T 13-10-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 COP00_22965 0546f0354f4e35281149e4f61806c4b0 205 SUPERFAMILY SSF51391 2 196 4.19E-45 T 13-10-2018 IPR036206 Thiamin phosphate synthase superfamily KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 COP00_22965 0546f0354f4e35281149e4f61806c4b0 205 Gene3D G3DSA:3.20.20.70 1 202 3.5E-52 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 COP00_22330 1964fcdfeb6fbd44eaed4a2c3fe63e25 509 Pfam PF01266 FAD dependent oxidoreductase 35 379 8.6E-49 T 13-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 COP00_22330 1964fcdfeb6fbd44eaed4a2c3fe63e25 509 Gene3D G3DSA:3.50.50.60 35 381 3.4E-50 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily COP00_22330 1964fcdfeb6fbd44eaed4a2c3fe63e25 509 SUPERFAMILY SSF50022 423 505 9.95E-26 T 13-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 COP00_22330 1964fcdfeb6fbd44eaed4a2c3fe63e25 509 SUPERFAMILY SSF51971 31 386 7.53E-36 T 13-10-2018 COP00_22330 1964fcdfeb6fbd44eaed4a2c3fe63e25 509 Gene3D G3DSA:3.30.9.10 128 339 3.4E-50 T 13-10-2018 COP00_22330 1964fcdfeb6fbd44eaed4a2c3fe63e25 509 Gene3D G3DSA:2.102.10.10 410 509 1.7E-24 T 13-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 COP00_22330 1964fcdfeb6fbd44eaed4a2c3fe63e25 509 PRINTS PR00162 Rieske 2Fe-2S subunit signature 480 492 7.0E-8 T 13-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 COP00_22330 1964fcdfeb6fbd44eaed4a2c3fe63e25 509 PRINTS PR00162 Rieske 2Fe-2S subunit signature 459 470 7.0E-8 T 13-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 COP00_22330 1964fcdfeb6fbd44eaed4a2c3fe63e25 509 PRINTS PR00162 Rieske 2Fe-2S subunit signature 492 504 7.0E-8 T 13-10-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 COP00_22330 1964fcdfeb6fbd44eaed4a2c3fe63e25 509 Pfam PF00355 Rieske [2Fe-2S] domain 425 506 1.7E-14 T 13-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 COP00_11500 cbaf857111107c07bc83853839792df1 689 SUPERFAMILY SSF53639 19 225 1.81E-37 T 13-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily COP00_11500 cbaf857111107c07bc83853839792df1 689 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 553 569 3.4E-20 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_11500 cbaf857111107c07bc83853839792df1 689 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 600 617 3.4E-20 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_11500 cbaf857111107c07bc83853839792df1 689 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 579 598 3.4E-20 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_11500 cbaf857111107c07bc83853839792df1 689 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 505 516 3.4E-20 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_11500 cbaf857111107c07bc83853839792df1 689 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 429 446 3.4E-20 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_11500 cbaf857111107c07bc83853839792df1 689 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 647 667 3.4E-20 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_11500 cbaf857111107c07bc83853839792df1 689 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 20 218 3.1E-26 T 13-10-2018 IPR001303 Class II aldolase/adducin N-terminal COP00_11500 cbaf857111107c07bc83853839792df1 689 Gene3D G3DSA:3.40.225.10 17 226 1.2E-65 T 13-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily COP00_11500 cbaf857111107c07bc83853839792df1 689 SUPERFAMILY SSF51735 418 686 1.58E-65 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily COP00_11500 cbaf857111107c07bc83853839792df1 689 Gene3D G3DSA:3.40.50.720 415 686 2.0E-66 T 13-10-2018 COP00_11500 cbaf857111107c07bc83853839792df1 689 TIGRFAM TIGR02632 RhaD_aldol-ADH: rhamnulose-1-phosphate aldolase/alcohol dehydrogenase 19 689 0.0 T 13-10-2018 IPR013454 Bifunctional rhamnulose-1-phosphate aldolase/alcohol dehydrogenase COP00_11500 cbaf857111107c07bc83853839792df1 689 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 435 683 2.0E-47 T 13-10-2018 COP00_11500 cbaf857111107c07bc83853839792df1 689 SMART SM01007 20 219 5.4E-38 T 13-10-2018 IPR001303 Class II aldolase/adducin N-terminal COP00_23795 b3bc6c8f58ea499fb41dbce0c0118cd5 622 Gene3D G3DSA:2.60.40.10 37 128 3.7E-35 T 13-10-2018 IPR013783 Immunoglobulin-like fold COP00_23795 b3bc6c8f58ea499fb41dbce0c0118cd5 622 SUPERFAMILY SSF69318 143 410 1.44E-15 T 13-10-2018 COP00_17405 593bdcd8ab77d268be31914768fec513 301 SUPERFAMILY SSF51735 3 242 4.5E-34 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily COP00_17405 593bdcd8ab77d268be31914768fec513 301 Gene3D G3DSA:3.40.50.720 3 203 5.3E-48 T 13-10-2018 COP00_17405 593bdcd8ab77d268be31914768fec513 301 Gene3D G3DSA:3.90.25.10 145 265 5.3E-48 T 13-10-2018 COP00_17405 593bdcd8ab77d268be31914768fec513 301 Pfam PF05368 NmrA-like family 3 226 2.6E-16 T 13-10-2018 IPR008030 NmrA-like domain Reactome: R-HSA-70635 COP00_11865 fdd2702cb54bca831507c791f96ed780 138 SMART SM00530 7 62 3.7E-19 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 COP00_11865 fdd2702cb54bca831507c791f96ed780 138 SUPERFAMILY SSF47413 2 65 1.02E-17 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 COP00_11865 fdd2702cb54bca831507c791f96ed780 138 Pfam PF01381 Helix-turn-helix 8 62 1.9E-19 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 COP00_11865 fdd2702cb54bca831507c791f96ed780 138 Gene3D G3DSA:1.10.260.40 4 126 5.0E-22 T 13-10-2018 COP00_00885 69c79006464998d5748ee2d8540c4658 432 Hamap MF_02033 Cell division protein FtsA [ftsA]. 3 431 30.062 T 13-10-2018 IPR020823 Cell division protein FtsA COP00_00885 69c79006464998d5748ee2d8540c4658 432 PIRSF PIRSF003101 1 431 1.1E-149 T 13-10-2018 IPR020823 Cell division protein FtsA COP00_00885 69c79006464998d5748ee2d8540c4658 432 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 7 369 4.1E-131 T 13-10-2018 IPR020823 Cell division protein FtsA COP00_00885 69c79006464998d5748ee2d8540c4658 432 Pfam PF02491 SHS2 domain inserted in FTSA 81 160 3.4E-23 T 13-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 COP00_00885 69c79006464998d5748ee2d8540c4658 432 SMART SM00842 7 194 1.6E-89 T 13-10-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0051301 COP00_00885 69c79006464998d5748ee2d8540c4658 432 Pfam PF14450 Cell division protein FtsA 9 187 1.9E-9 T 13-10-2018 COP00_00885 69c79006464998d5748ee2d8540c4658 432 Gene3D G3DSA:3.90.640.10 233 298 1.0E-113 T 13-10-2018 COP00_00885 69c79006464998d5748ee2d8540c4658 432 SUPERFAMILY SSF53067 5 194 9.43E-58 T 13-10-2018 COP00_00885 69c79006464998d5748ee2d8540c4658 432 SUPERFAMILY SSF53067 197 368 1.05E-43 T 13-10-2018 COP00_00885 69c79006464998d5748ee2d8540c4658 432 Pfam PF14450 Cell division protein FtsA 205 366 1.2E-24 T 13-10-2018 COP00_00885 69c79006464998d5748ee2d8540c4658 432 Gene3D G3DSA:3.30.420.40 195 349 1.0E-113 T 13-10-2018 COP00_00885 69c79006464998d5748ee2d8540c4658 432 Gene3D G3DSA:3.30.1490.110 83 167 1.0E-113 T 13-10-2018 COP00_00885 69c79006464998d5748ee2d8540c4658 432 Gene3D G3DSA:3.30.420.40 10 363 1.0E-113 T 13-10-2018 COP00_16260 a9e3d9afa025fe6eee47c5282b474308 125 SUPERFAMILY SSF55298 2 124 5.81E-49 T 13-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 COP00_16260 a9e3d9afa025fe6eee47c5282b474308 125 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 100 118 - T 13-10-2018 IPR019897 RidA, conserved site Reactome: R-HSA-8849175 COP00_16260 a9e3d9afa025fe6eee47c5282b474308 125 Gene3D G3DSA:3.30.1330.40 2 125 2.5E-57 T 13-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 COP00_16260 a9e3d9afa025fe6eee47c5282b474308 125 Pfam PF01042 Endoribonuclease L-PSP 8 123 9.3E-49 T 13-10-2018 IPR006175 YjgF/YER057c/UK114 family Reactome: R-HSA-8849175 COP00_16260 a9e3d9afa025fe6eee47c5282b474308 125 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 3 123 2.3E-57 T 13-10-2018 IPR006056 RidA family Reactome: R-HSA-8849175 COP00_15135 cdd869076dbd05e1d43973d55b6ad004 333 Gene3D G3DSA:1.10.287.130 123 174 3.3E-31 T 13-10-2018 COP00_15135 cdd869076dbd05e1d43973d55b6ad004 333 PRINTS PR00344 Bacterial sensor protein C-terminal signature 252 266 1.2E-8 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 COP00_15135 cdd869076dbd05e1d43973d55b6ad004 333 PRINTS PR00344 Bacterial sensor protein C-terminal signature 309 322 1.2E-8 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 COP00_15135 cdd869076dbd05e1d43973d55b6ad004 333 PRINTS PR00344 Bacterial sensor protein C-terminal signature 285 303 1.2E-8 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 COP00_15135 cdd869076dbd05e1d43973d55b6ad004 333 PRINTS PR00344 Bacterial sensor protein C-terminal signature 270 280 1.2E-8 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 COP00_15135 cdd869076dbd05e1d43973d55b6ad004 333 SMART SM00387 216 325 5.3E-21 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase COP00_15135 cdd869076dbd05e1d43973d55b6ad004 333 Gene3D G3DSA:3.30.565.10 175 322 3.3E-31 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily COP00_15135 cdd869076dbd05e1d43973d55b6ad004 333 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 217 324 9.1E-19 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase COP00_15135 cdd869076dbd05e1d43973d55b6ad004 333 SUPERFAMILY SSF55874 175 322 1.02E-29 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily COP00_15340 1dd480758c8449935fdc8b307d59b0da 349 Gene3D G3DSA:3.40.50.1970 2 156 4.3E-31 T 13-10-2018 COP00_15340 1dd480758c8449935fdc8b307d59b0da 349 SUPERFAMILY SSF56796 2 329 3.79E-53 T 13-10-2018 COP00_15340 1dd480758c8449935fdc8b307d59b0da 349 Pfam PF13685 Iron-containing alcohol dehydrogenase 16 268 2.5E-72 T 13-10-2018 IPR032837 Glycerol-1-phosphate dehydrogenase KEGG: 00564+1.1.1.261|MetaCyc: PWY-6349 COP00_15340 1dd480758c8449935fdc8b307d59b0da 349 PIRSF PIRSF000112 1 348 5.4E-74 T 13-10-2018 IPR016205 Glycerol dehydrogenase GO:0016614|GO:0046872|GO:0055114 KEGG: 00564+1.1.1.261|MetaCyc: PWY-6349 COP00_15340 1dd480758c8449935fdc8b307d59b0da 349 Gene3D G3DSA:1.20.1090.10 157 349 3.9E-49 T 13-10-2018 COP00_16780 5a5fbedee5ab6b157b3f9e21c0322719 431 Hamap MF_01465 Protein translocase subunit SecY [secY]. 5 429 29.031 T 13-10-2018 IPR026593 Protein translocase subunit SecY COP00_16780 5a5fbedee5ab6b157b3f9e21c0322719 431 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 15 425 5.4E-154 T 13-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 COP00_16780 5a5fbedee5ab6b157b3f9e21c0322719 431 ProSitePatterns PS00756 Protein secY signature 2. 165 182 - T 13-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 COP00_16780 5a5fbedee5ab6b157b3f9e21c0322719 431 Pfam PF00344 SecY translocase 68 413 7.2E-112 T 13-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 COP00_16780 5a5fbedee5ab6b157b3f9e21c0322719 431 PRINTS PR00303 Preprotein translocase SecY subunit signature 172 195 8.0E-101 T 13-10-2018 COP00_16780 5a5fbedee5ab6b157b3f9e21c0322719 431 PRINTS PR00303 Preprotein translocase SecY subunit signature 18 36 8.0E-101 T 13-10-2018 COP00_16780 5a5fbedee5ab6b157b3f9e21c0322719 431 PRINTS PR00303 Preprotein translocase SecY subunit signature 309 331 8.0E-101 T 13-10-2018 COP00_16780 5a5fbedee5ab6b157b3f9e21c0322719 431 PRINTS PR00303 Preprotein translocase SecY subunit signature 364 382 8.0E-101 T 13-10-2018 COP00_16780 5a5fbedee5ab6b157b3f9e21c0322719 431 PRINTS PR00303 Preprotein translocase SecY subunit signature 67 87 8.0E-101 T 13-10-2018 COP00_16780 5a5fbedee5ab6b157b3f9e21c0322719 431 PRINTS PR00303 Preprotein translocase SecY subunit signature 109 132 8.0E-101 T 13-10-2018 COP00_16780 5a5fbedee5ab6b157b3f9e21c0322719 431 PRINTS PR00303 Preprotein translocase SecY subunit signature 146 171 8.0E-101 T 13-10-2018 COP00_16780 5a5fbedee5ab6b157b3f9e21c0322719 431 PRINTS PR00303 Preprotein translocase SecY subunit signature 269 288 8.0E-101 T 13-10-2018 COP00_16780 5a5fbedee5ab6b157b3f9e21c0322719 431 PRINTS PR00303 Preprotein translocase SecY subunit signature 398 416 8.0E-101 T 13-10-2018 COP00_16780 5a5fbedee5ab6b157b3f9e21c0322719 431 SUPERFAMILY SSF103491 2 420 4.32E-129 T 13-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 COP00_16780 5a5fbedee5ab6b157b3f9e21c0322719 431 Gene3D G3DSA:1.10.3370.10 1 425 2.0E-157 T 13-10-2018 IPR023201 SecY domain superfamily Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 COP00_16780 5a5fbedee5ab6b157b3f9e21c0322719 431 PIRSF PIRSF004557 1 431 2.1E-123 T 13-10-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 COP00_16780 5a5fbedee5ab6b157b3f9e21c0322719 431 ProSitePatterns PS00755 Protein secY signature 1. 68 87 - T 13-10-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 COP00_02075 976b0fe62e727601f3dc0d4837f509fe 105 Gene3D G3DSA:1.10.3730.20 2 105 2.1E-33 T 13-10-2018 COP00_02075 976b0fe62e727601f3dc0d4837f509fe 105 SUPERFAMILY SSF103481 6 104 1.7E-20 T 13-10-2018 COP00_02075 976b0fe62e727601f3dc0d4837f509fe 105 Pfam PF00893 Small Multidrug Resistance protein 4 93 3.1E-28 T 13-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 COP00_11225 dcfa63b6b9556a56e6ee2a2a0bc9e476 349 SUPERFAMILY SSF81345 7 343 6.28E-79 T 13-10-2018 IPR037294 ABC transporter, BtuC-like COP00_11225 dcfa63b6b9556a56e6ee2a2a0bc9e476 349 Pfam PF01032 FecCD transport family 25 343 8.0E-92 T 13-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 COP00_11225 dcfa63b6b9556a56e6ee2a2a0bc9e476 349 Gene3D G3DSA:1.10.3470.10 11 349 3.8E-98 T 13-10-2018 IPR037294 ABC transporter, BtuC-like COP00_11285 b62704c6bf6b7997173e2fadd985d8cd 242 Gene3D G3DSA:3.40.50.2300 1 131 8.6E-36 T 13-10-2018 COP00_11285 b62704c6bf6b7997173e2fadd985d8cd 242 SUPERFAMILY SSF46894 133 233 4.82E-27 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 COP00_11285 b62704c6bf6b7997173e2fadd985d8cd 242 SMART SM00862 155 231 2.1E-25 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 COP00_11285 b62704c6bf6b7997173e2fadd985d8cd 242 Pfam PF00072 Response regulator receiver domain 6 116 4.7E-29 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 COP00_11285 b62704c6bf6b7997173e2fadd985d8cd 242 Pfam PF00486 Transcriptional regulatory protein, C terminal 155 231 7.4E-25 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 COP00_11285 b62704c6bf6b7997173e2fadd985d8cd 242 SMART SM00448 4 115 2.9E-41 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 COP00_11285 b62704c6bf6b7997173e2fadd985d8cd 242 Gene3D G3DSA:1.10.10.10 132 241 2.4E-31 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_11285 b62704c6bf6b7997173e2fadd985d8cd 242 SUPERFAMILY SSF52172 3 148 2.13E-38 T 13-10-2018 IPR011006 CheY-like superfamily COP00_07250 b108771ce33a0589f9182c49068536eb 398 TIGRFAM TIGR02876 spore_yqfD: sporulation protein YqfD 5 388 1.6E-116 T 13-10-2018 IPR010690 Putative stage IV sporulation YqfD COP00_07250 b108771ce33a0589f9182c49068536eb 398 PIRSF PIRSF029895 1 398 3.3E-164 T 13-10-2018 IPR010690 Putative stage IV sporulation YqfD COP00_07250 b108771ce33a0589f9182c49068536eb 398 Pfam PF06898 Putative stage IV sporulation protein YqfD 8 386 8.4E-115 T 13-10-2018 IPR010690 Putative stage IV sporulation YqfD COP00_07060 217dbd565142450914ade0f8ec6c9d96 250 Pfam PF06691 Protein of unknown function (DUF1189) 4 241 2.4E-68 T 13-10-2018 IPR009574 Protein of unknown function DUF1189 COP00_22505 26a3168ed9a8caf528bb56173da83ea9 79 ProDom PD027559 GERMINATION SPORE GERPB PROBABLE PB SPORULATION PB-RELATED 1 52 2.0E-22 T 13-10-2018 IPR024255 Spore germination GerPB COP00_22505 26a3168ed9a8caf528bb56173da83ea9 79 Pfam PF10803 Spore germination GerPB 1 51 6.2E-31 T 13-10-2018 IPR024255 Spore germination GerPB COP00_04795 b80ea751761951a92f10d73c2eb1a6ab 162 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 84 118 2.1E-8 T 13-10-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 COP00_04795 b80ea751761951a92f10d73c2eb1a6ab 162 SUPERFAMILY SSF57716 86 121 3.56E-7 T 13-10-2018 COP00_04795 b80ea751761951a92f10d73c2eb1a6ab 162 Gene3D G3DSA:1.20.120.910 2 125 7.9E-28 T 13-10-2018 COP00_04795 b80ea751761951a92f10d73c2eb1a6ab 162 SUPERFAMILY SSF109635 3 85 7.45E-10 T 13-10-2018 IPR037187 DksA, N-terminal domain superfamily COP00_16195 34e25f4477ebe303fbfb32346a750bd6 97 Gene3D G3DSA:3.40.1440.10 1 96 8.7E-34 T 13-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 COP00_16195 34e25f4477ebe303fbfb32346a750bd6 97 Pfam PF01541 GIY-YIG catalytic domain 6 77 2.2E-17 T 13-10-2018 IPR000305 GIY-YIG endonuclease COP00_16195 34e25f4477ebe303fbfb32346a750bd6 97 SMART SM00465 5 83 1.2E-4 T 13-10-2018 IPR000305 GIY-YIG endonuclease COP00_16195 34e25f4477ebe303fbfb32346a750bd6 97 SUPERFAMILY SSF82771 6 78 2.35E-14 T 13-10-2018 IPR035901 GIY-YIG endonuclease superfamily Reactome: R-HSA-5693568|Reactome: R-HSA-6783310 COP00_01860 7223b8fc9a625a367c38300144a72ffb 379 SUPERFAMILY SSF56601 38 339 1.23E-25 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like COP00_01860 7223b8fc9a625a367c38300144a72ffb 379 Pfam PF13354 Beta-lactamase enzyme family 60 303 1.5E-20 T 13-10-2018 COP00_01860 7223b8fc9a625a367c38300144a72ffb 379 Gene3D G3DSA:3.40.710.10 36 350 2.8E-42 T 13-10-2018 COP00_17350 75d724b1c8059ef8dc58b8d6cc6c44d3 501 Gene3D G3DSA:1.10.10.2600 142 285 1.0E-15 T 13-10-2018 IPR038109 DNA-binding recombinase domain superfamily COP00_17350 75d724b1c8059ef8dc58b8d6cc6c44d3 501 SUPERFAMILY SSF53041 9 158 2.35E-15 T 13-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 COP00_17350 75d724b1c8059ef8dc58b8d6cc6c44d3 501 Pfam PF00239 Resolvase, N terminal domain 10 158 5.8E-15 T 13-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 COP00_17350 75d724b1c8059ef8dc58b8d6cc6c44d3 501 Gene3D G3DSA:3.40.50.1390 7 111 3.0E-16 T 13-10-2018 COP00_17350 75d724b1c8059ef8dc58b8d6cc6c44d3 501 Pfam PF07508 Recombinase 180 284 8.9E-21 T 13-10-2018 IPR011109 DNA-binding recombinase domain GO:0000150|GO:0003677 COP00_17350 75d724b1c8059ef8dc58b8d6cc6c44d3 501 SMART SM00857 10 158 8.0E-18 T 13-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 COP00_01120 14da7db9760723f6d87e17dd2c35ca09 317 Pfam PF02911 Formyl transferase, C-terminal domain 204 302 4.4E-32 T 13-10-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 COP00_01120 14da7db9760723f6d87e17dd2c35ca09 317 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 133 156 - T 13-10-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 COP00_01120 14da7db9760723f6d87e17dd2c35ca09 317 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 2 303 2.3E-119 T 13-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 COP00_01120 14da7db9760723f6d87e17dd2c35ca09 317 Gene3D G3DSA:3.10.25.10 207 314 1.2E-39 T 13-10-2018 IPR037022 Formyl transferase, C-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 COP00_01120 14da7db9760723f6d87e17dd2c35ca09 317 SUPERFAMILY SSF50486 205 310 3.61E-35 T 13-10-2018 IPR011034 Formyl transferase-like, C-terminal domain superfamily GO:0003824 COP00_01120 14da7db9760723f6d87e17dd2c35ca09 317 SUPERFAMILY SSF53328 3 206 1.23E-68 T 13-10-2018 IPR036477 Formyl transferase, N-terminal domain superfamily GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 COP00_01120 14da7db9760723f6d87e17dd2c35ca09 317 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 2 305 37.383 T 13-10-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 COP00_01120 14da7db9760723f6d87e17dd2c35ca09 317 Pfam PF00551 Formyl transferase 3 180 2.4E-40 T 13-10-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 COP00_01120 14da7db9760723f6d87e17dd2c35ca09 317 Gene3D G3DSA:3.40.50.170 1 206 3.3E-86 T 13-10-2018 COP00_18400 432950c1df2b90a264b14e106aca27f3 290 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 63 8.0E-22 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 COP00_18400 432950c1df2b90a264b14e106aca27f3 290 SUPERFAMILY SSF53850 89 289 1.07E-28 T 13-10-2018 COP00_18400 432950c1df2b90a264b14e106aca27f3 290 Gene3D G3DSA:1.10.10.10 1 81 1.5E-29 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_18400 432950c1df2b90a264b14e106aca27f3 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 7.0E-11 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 COP00_18400 432950c1df2b90a264b14e106aca27f3 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 7.0E-11 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 COP00_18400 432950c1df2b90a264b14e106aca27f3 290 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 7.0E-11 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 COP00_18400 432950c1df2b90a264b14e106aca27f3 290 Pfam PF03466 LysR substrate binding domain 88 289 3.7E-29 T 13-10-2018 IPR005119 LysR, substrate-binding COP00_18400 432950c1df2b90a264b14e106aca27f3 290 SUPERFAMILY SSF46785 1 88 3.83E-22 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_18400 432950c1df2b90a264b14e106aca27f3 290 Gene3D G3DSA:3.40.190.290 92 290 2.9E-34 T 13-10-2018 COP00_12140 d00fdb665e5934acdb9944b34d747d29 359 Pfam PF04230 Polysaccharide pyruvyl transferase 53 293 7.0E-28 T 13-10-2018 IPR007345 Polysaccharide pyruvyl transferase COP00_14565 328a78bffa224896a9b0ce648b49850a 422 Gene3D G3DSA:1.20.1250.20 15 404 5.8E-20 T 13-10-2018 COP00_14565 328a78bffa224896a9b0ce648b49850a 422 SUPERFAMILY SSF103473 13 407 2.35E-31 T 13-10-2018 IPR036259 MFS transporter superfamily COP00_14565 328a78bffa224896a9b0ce648b49850a 422 Pfam PF07690 Major Facilitator Superfamily 49 367 4.2E-17 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 COP00_22005 2ba72eae044f920a5281293d6fcaf802 294 Gene3D G3DSA:1.10.10.2840 192 293 8.9E-13 T 13-10-2018 COP00_22005 2ba72eae044f920a5281293d6fcaf802 294 SUPERFAMILY SSF46689 223 267 1.3E-5 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 COP00_22005 2ba72eae044f920a5281293d6fcaf802 294 Pfam PF13556 PucR C-terminal helix-turn-helix domain 235 289 1.7E-15 T 13-10-2018 IPR025736 PucR C-terminal helix-turn-helix domain COP00_18860 cda6d8102b8ab0b404e25fa24eb7a39a 573 SUPERFAMILY SSF52467 188 349 1.93E-43 T 13-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily COP00_18860 cda6d8102b8ab0b404e25fa24eb7a39a 573 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 381 526 1.1E-42 T 13-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 COP00_18860 cda6d8102b8ab0b404e25fa24eb7a39a 573 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 417 436 - T 13-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 COP00_18860 cda6d8102b8ab0b404e25fa24eb7a39a 573 Gene3D G3DSA:3.40.50.970 1 183 2.9E-58 T 13-10-2018 COP00_18860 cda6d8102b8ab0b404e25fa24eb7a39a 573 SUPERFAMILY SSF52518 3 174 5.64E-44 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold COP00_18860 cda6d8102b8ab0b404e25fa24eb7a39a 573 SUPERFAMILY SSF52518 358 562 1.79E-62 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold COP00_18860 cda6d8102b8ab0b404e25fa24eb7a39a 573 Gene3D G3DSA:3.40.50.970 348 569 7.1E-61 T 13-10-2018 COP00_18860 cda6d8102b8ab0b404e25fa24eb7a39a 573 Gene3D G3DSA:3.40.50.1220 184 335 2.0E-48 T 13-10-2018 COP00_18860 cda6d8102b8ab0b404e25fa24eb7a39a 573 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 5 171 1.7E-44 T 13-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 COP00_18860 cda6d8102b8ab0b404e25fa24eb7a39a 573 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 195 321 1.4E-33 T 13-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 COP00_00495 f7ca83b497318968ca310e637d578a3a 335 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 5 331 1.5E-137 T 13-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 COP00_00495 f7ca83b497318968ca310e637d578a3a 335 Gene3D G3DSA:3.30.420.40 7 322 3.2E-125 T 13-10-2018 COP00_00495 f7ca83b497318968ca310e637d578a3a 335 SUPERFAMILY SSF53067 144 327 3.95E-49 T 13-10-2018 COP00_00495 f7ca83b497318968ca310e637d578a3a 335 Gene3D G3DSA:3.90.640.10 181 254 3.2E-125 T 13-10-2018 COP00_00495 f7ca83b497318968ca310e637d578a3a 335 Gene3D G3DSA:3.30.420.40 149 312 3.2E-125 T 13-10-2018 COP00_00495 f7ca83b497318968ca310e637d578a3a 335 SUPERFAMILY SSF53067 6 141 2.7E-37 T 13-10-2018 COP00_00495 f7ca83b497318968ca310e637d578a3a 335 Pfam PF06723 MreB/Mbl protein 5 331 1.7E-144 T 13-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 COP00_00495 f7ca83b497318968ca310e637d578a3a 335 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 127 146 2.2E-54 T 13-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 COP00_00495 f7ca83b497318968ca310e637d578a3a 335 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 42 60 2.2E-54 T 13-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 COP00_00495 f7ca83b497318968ca310e637d578a3a 335 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 62 85 2.2E-54 T 13-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 COP00_00495 f7ca83b497318968ca310e637d578a3a 335 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 182 202 2.2E-54 T 13-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 COP00_00495 f7ca83b497318968ca310e637d578a3a 335 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 295 321 2.2E-54 T 13-10-2018 IPR004753 Cell shape determining protein MreB GO:0000902 COP00_03475 91fcbf941f5eeb400aad2e2eb3f44cdd 471 Gene3D G3DSA:3.90.660.10 15 406 1.2E-92 T 13-10-2018 COP00_03475 91fcbf941f5eeb400aad2e2eb3f44cdd 471 Pfam PF01593 Flavin containing amine oxidoreductase 25 466 2.9E-72 T 13-10-2018 IPR002937 Amine oxidase GO:0016491|GO:0055114 COP00_03475 91fcbf941f5eeb400aad2e2eb3f44cdd 471 Gene3D G3DSA:1.10.10.1620 423 469 2.9E-20 T 13-10-2018 COP00_03475 91fcbf941f5eeb400aad2e2eb3f44cdd 471 PRINTS PR00757 Flavin-containing amine oxidase signature 17 36 5.8E-9 T 13-10-2018 IPR001613 Flavin amine oxidase GO:0016491|GO:0055114 COP00_03475 91fcbf941f5eeb400aad2e2eb3f44cdd 471 PRINTS PR00757 Flavin-containing amine oxidase signature 311 330 5.8E-9 T 13-10-2018 IPR001613 Flavin amine oxidase GO:0016491|GO:0055114 COP00_03475 91fcbf941f5eeb400aad2e2eb3f44cdd 471 PRINTS PR00757 Flavin-containing amine oxidase signature 448 465 5.8E-9 T 13-10-2018 IPR001613 Flavin amine oxidase GO:0016491|GO:0055114 COP00_03475 91fcbf941f5eeb400aad2e2eb3f44cdd 471 Gene3D G3DSA:3.50.50.60 17 415 1.2E-92 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily COP00_03475 91fcbf941f5eeb400aad2e2eb3f44cdd 471 SUPERFAMILY SSF51905 14 467 1.9E-59 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily COP00_03475 91fcbf941f5eeb400aad2e2eb3f44cdd 471 Gene3D G3DSA:1.10.405.10 113 216 1.2E-92 T 13-10-2018 COP00_03475 91fcbf941f5eeb400aad2e2eb3f44cdd 471 SUPERFAMILY SSF54373 307 417 1.37E-29 T 13-10-2018 COP00_22025 795cf5cf7ebab1b8ff28096df580df93 376 PIRSF PIRSF032178 1 376 1.3E-136 T 13-10-2018 IPR016991 Protein of unknown function UCP032178 COP00_22025 795cf5cf7ebab1b8ff28096df580df93 376 Pfam PF04286 Protein of unknown function (DUF445) 12 375 6.3E-82 T 13-10-2018 IPR007383 Protein of unknown function DUF445 COP00_13165 6951cacb60e6303aafacd7323b9629fd 257 SUPERFAMILY SSF53448 11 231 1.16E-58 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases COP00_13165 6951cacb60e6303aafacd7323b9629fd 257 Gene3D G3DSA:3.90.550.10 2 255 6.5E-63 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases COP00_13165 6951cacb60e6303aafacd7323b9629fd 257 Pfam PF00535 Glycosyl transferase family 2 14 143 3.2E-39 T 13-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 COP00_05605 465fec527e086f0b735615c419ab8f17 424 SUPERFAMILY SSF48452 39 203 4.93E-20 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 COP00_05605 465fec527e086f0b735615c419ab8f17 424 SUPERFAMILY SSF48452 173 367 6.5E-25 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 COP00_05605 465fec527e086f0b735615c419ab8f17 424 Pfam PF13429 Tetratricopeptide repeat 275 394 3.4E-6 T 13-10-2018 COP00_05605 465fec527e086f0b735615c419ab8f17 424 Gene3D G3DSA:1.25.40.10 103 165 3.3E-7 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 COP00_05605 465fec527e086f0b735615c419ab8f17 424 Gene3D G3DSA:1.25.40.10 168 418 1.0E-40 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 COP00_05605 465fec527e086f0b735615c419ab8f17 424 SMART SM00028 135 168 140.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 COP00_05605 465fec527e086f0b735615c419ab8f17 424 SMART SM00028 101 134 140.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 COP00_05605 465fec527e086f0b735615c419ab8f17 424 SMART SM00028 238 271 15.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 COP00_05605 465fec527e086f0b735615c419ab8f17 424 SMART SM00028 272 305 17.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 COP00_05605 465fec527e086f0b735615c419ab8f17 424 SMART SM00028 374 407 39.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 COP00_05605 465fec527e086f0b735615c419ab8f17 424 SMART SM00028 171 204 2.1E-4 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 COP00_05605 465fec527e086f0b735615c419ab8f17 424 SUPERFAMILY SSF48452 345 416 6.96E-7 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 COP00_05605 465fec527e086f0b735615c419ab8f17 424 Gene3D G3DSA:1.25.40.10 32 102 1.0E-10 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 COP00_05605 465fec527e086f0b735615c419ab8f17 424 Pfam PF14559 Tetratricopeptide repeat 50 109 1.2E-7 T 13-10-2018 COP00_05605 465fec527e086f0b735615c419ab8f17 424 Pfam PF07719 Tetratricopeptide repeat 173 203 8.1E-6 T 13-10-2018 IPR013105 Tetratricopeptide repeat 2 COP00_04860 473c5f688b0f0df524a82299e2d38c72 136 Gene3D G3DSA:3.40.140.10 1 136 1.5E-29 T 13-10-2018 COP00_04860 473c5f688b0f0df524a82299e2d38c72 136 SUPERFAMILY SSF53927 3 131 1.85E-26 T 13-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 COP00_14110 c2b968e30edf97a8b22398b837d269ee 280 Pfam PF03099 Biotin/lipoate A/B protein ligase family 74 183 7.8E-16 T 13-10-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 COP00_14110 c2b968e30edf97a8b22398b837d269ee 280 SUPERFAMILY SSF55681 5 267 4.06E-70 T 13-10-2018 COP00_14110 c2b968e30edf97a8b22398b837d269ee 280 Gene3D G3DSA:3.30.930.10 3 280 4.2E-81 T 13-10-2018 COP00_14110 c2b968e30edf97a8b22398b837d269ee 280 Hamap MF_02119 Lipoyl-[GcvH]:protein N-lipoyltransferase [lipL]. 6 280 50.707 T 13-10-2018 IPR024897 Octanoyltransferase LipL GO:0009107|GO:0009249|GO:0016415 MetaCyc: PWY-6987 COP00_15710 1bd2c2fd16001da2d139e730faa62ae0 280 Pfam PF09648 YycH protein 32 262 3.8E-59 T 13-10-2018 IPR018604 Regulatory protein YycH-like GO:0016021 COP00_15710 1bd2c2fd16001da2d139e730faa62ae0 280 Gene3D G3DSA:3.10.450.660 47 270 1.8E-67 T 13-10-2018 COP00_15710 1bd2c2fd16001da2d139e730faa62ae0 280 Gene3D G3DSA:3.30.310.160 70 193 1.8E-67 T 13-10-2018 COP00_05235 c9a394b1baaa19e5ae3445fe91eb137e 144 TIGRFAM TIGR04191 YphP_YqiW: putative bacilliredoxin, YphP/YqiW family 8 144 1.5E-63 T 13-10-2018 IPR009474 Putative bacilliredoxin, YphP/YqiW family COP00_05235 c9a394b1baaa19e5ae3445fe91eb137e 144 Gene3D G3DSA:3.40.30.10 25 144 5.0E-52 T 13-10-2018 COP00_05235 c9a394b1baaa19e5ae3445fe91eb137e 144 Pfam PF06491 Disulphide isomerase 8 144 8.0E-61 T 13-10-2018 IPR009474 Putative bacilliredoxin, YphP/YqiW family COP00_01000 7a842d4c3d21baef9b3891715599db09 428 TIGRFAM TIGR00857 pyrC_multi: dihydroorotase, multifunctional complex type 15 423 2.8E-158 T 13-10-2018 COP00_01000 7a842d4c3d21baef9b3891715599db09 428 Hamap MF_00220_B Dihydroorotase [pyrC]. 3 423 45.188 T 13-10-2018 IPR004722 Dihydroorotase GO:0004151|GO:0006221|GO:0046872 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 COP00_01000 7a842d4c3d21baef9b3891715599db09 428 Gene3D G3DSA:2.30.40.10 7 419 1.1E-150 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 COP00_01000 7a842d4c3d21baef9b3891715599db09 428 ProSitePatterns PS00482 Dihydroorotase signature 1. 57 65 - T 13-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 COP00_01000 7a842d4c3d21baef9b3891715599db09 428 ProSitePatterns PS00483 Dihydroorotase signature 2. 302 313 - T 13-10-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 COP00_01000 7a842d4c3d21baef9b3891715599db09 428 SUPERFAMILY SSF51338 1 427 2.79E-27 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 COP00_01000 7a842d4c3d21baef9b3891715599db09 428 SUPERFAMILY SSF51556 54 368 5.5E-111 T 13-10-2018 IPR032466 Metal-dependent hydrolase COP00_01000 7a842d4c3d21baef9b3891715599db09 428 Gene3D G3DSA:3.20.20.140 54 366 1.1E-150 T 13-10-2018 COP00_01000 7a842d4c3d21baef9b3891715599db09 428 Pfam PF01979 Amidohydrolase family 50 420 1.4E-54 T 13-10-2018 IPR006680 Amidohydrolase-related GO:0016787 COP00_12650 6d0dfb15439c0d89c634e1a70be82b8c 337 Pfam PF13155 Toprim-like 216 300 1.8E-8 T 13-10-2018 COP00_12650 6d0dfb15439c0d89c634e1a70be82b8c 337 SUPERFAMILY SSF56731 139 323 1.31E-11 T 13-10-2018 COP00_12650 6d0dfb15439c0d89c634e1a70be82b8c 337 Gene3D G3DSA:3.40.1360.10 198 316 4.6E-13 T 13-10-2018 COP00_22635 3568a03fab7999b6ded231f5f82d698c 604 Gene3D G3DSA:1.10.510.40 383 582 3.7E-58 T 13-10-2018 COP00_22635 3568a03fab7999b6ded231f5f82d698c 604 Gene3D G3DSA:1.10.274.90 4 133 3.9E-23 T 13-10-2018 COP00_22635 3568a03fab7999b6ded231f5f82d698c 604 Pfam PF06276 Ferric iron reductase FhuF-like transporter 416 576 2.0E-43 T 13-10-2018 IPR022770 Ferric iron reductase FhuF domain COP00_22635 3568a03fab7999b6ded231f5f82d698c 604 Pfam PF04183 IucA / IucC family 145 393 4.5E-73 T 13-10-2018 IPR007310 Aerobactin siderophore biosynthesis, IucA/IucC, N-terminal GO:0019290 COP00_17755 ebcc396ad62abcee0ad5acb89e82b30d 139 SUPERFAMILY SSF46785 24 137 2.73E-27 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_17755 ebcc396ad62abcee0ad5acb89e82b30d 139 Gene3D G3DSA:1.10.10.10 1 139 4.6E-30 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_17755 ebcc396ad62abcee0ad5acb89e82b30d 139 Pfam PF01047 MarR family 34 92 6.2E-16 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 COP00_17755 ebcc396ad62abcee0ad5acb89e82b30d 139 SMART SM00347 27 127 1.4E-27 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 COP00_17755 ebcc396ad62abcee0ad5acb89e82b30d 139 PRINTS PR00598 Bacterial regulatory protein MarR family signature 68 83 1.9E-11 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 COP00_17755 ebcc396ad62abcee0ad5acb89e82b30d 139 PRINTS PR00598 Bacterial regulatory protein MarR family signature 87 103 1.9E-11 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 COP00_17755 ebcc396ad62abcee0ad5acb89e82b30d 139 PRINTS PR00598 Bacterial regulatory protein MarR family signature 117 137 1.9E-11 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 COP00_12055 86c90120c44fc1aa1a0c2fe3d8b0cead 308 Gene3D G3DSA:3.40.50.300 1 238 1.2E-63 T 13-10-2018 COP00_12055 86c90120c44fc1aa1a0c2fe3d8b0cead 308 Pfam PF13732 Domain of unknown function (DUF4162) 212 299 8.4E-10 T 13-10-2018 IPR025302 Domain of unknown function DUF4162 COP00_12055 86c90120c44fc1aa1a0c2fe3d8b0cead 308 SUPERFAMILY SSF52540 3 229 2.51E-60 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_12055 86c90120c44fc1aa1a0c2fe3d8b0cead 308 ProSitePatterns PS00211 ABC transporters family signature. 131 145 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 COP00_12055 86c90120c44fc1aa1a0c2fe3d8b0cead 308 Pfam PF00005 ABC transporter 20 159 6.2E-28 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 COP00_12055 86c90120c44fc1aa1a0c2fe3d8b0cead 308 SMART SM00382 29 215 1.2E-8 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_20310 e03c415546742077cf00613ee769a6a3 96 SUPERFAMILY SSF141000 3 94 3.79E-32 T 13-10-2018 IPR036113 Glu-tRNAGln amidotransferase superfamily, subunit C GO:0006450 COP00_20310 e03c415546742077cf00613ee769a6a3 96 TIGRFAM TIGR00135 gatC: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit 4 96 3.7E-35 T 13-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 COP00_20310 e03c415546742077cf00613ee769a6a3 96 Pfam PF02686 Glu-tRNAGln amidotransferase C subunit 20 91 4.6E-22 T 13-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 COP00_20310 e03c415546742077cf00613ee769a6a3 96 Hamap MF_00122 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C [gatC]. 3 96 25.364 T 13-10-2018 IPR003837 Glu-tRNAGln amidotransferase C subunit GO:0006450 COP00_20310 e03c415546742077cf00613ee769a6a3 96 Gene3D G3DSA:1.10.20.60 1 94 2.0E-32 T 13-10-2018 COP00_12750 e6c5b138dabd61f83c30ba004849eb89 325 Gene3D G3DSA:1.10.3210.10 2 261 5.8E-42 T 13-10-2018 COP00_12750 e6c5b138dabd61f83c30ba004849eb89 325 Pfam PF01966 HD domain 49 153 1.8E-10 T 13-10-2018 IPR006674 HD domain COP00_12750 e6c5b138dabd61f83c30ba004849eb89 325 SMART SM00471 45 160 5.1E-10 T 13-10-2018 IPR003607 HD/PDEase domain COP00_12750 e6c5b138dabd61f83c30ba004849eb89 325 SUPERFAMILY SSF109604 3 257 2.09E-49 T 13-10-2018 COP00_11105 4013880eb015e197489cd30ba1b7d7ac 154 SUPERFAMILY SSF47240 9 153 4.06E-48 T 13-10-2018 IPR009078 Ferritin-like superfamily COP00_11105 4013880eb015e197489cd30ba1b7d7ac 154 PIRSF PIRSF005900 4 154 7.3E-48 T 13-10-2018 IPR002177 DNA-binding protein Dps COP00_11105 4013880eb015e197489cd30ba1b7d7ac 154 ProSitePatterns PS00818 Dps protein family signature 1. 35 51 - T 13-10-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 COP00_11105 4013880eb015e197489cd30ba1b7d7ac 154 Pfam PF00210 Ferritin-like domain 16 153 3.1E-32 T 13-10-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 COP00_11105 4013880eb015e197489cd30ba1b7d7ac 154 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 35 51 6.1E-16 T 13-10-2018 IPR002177 DNA-binding protein Dps COP00_11105 4013880eb015e197489cd30ba1b7d7ac 154 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 59 75 6.1E-16 T 13-10-2018 IPR002177 DNA-binding protein Dps COP00_11105 4013880eb015e197489cd30ba1b7d7ac 154 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 130 148 6.1E-16 T 13-10-2018 IPR002177 DNA-binding protein Dps COP00_11105 4013880eb015e197489cd30ba1b7d7ac 154 Gene3D G3DSA:1.20.1260.10 2 153 3.4E-54 T 13-10-2018 IPR012347 Ferritin-like COP00_05590 c50bbbae3b9e10b22ebc6c3f42dc1116 168 SUPERFAMILY SSF50022 4 159 6.42E-29 T 13-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 COP00_05590 c50bbbae3b9e10b22ebc6c3f42dc1116 168 Pfam PF08802 Cytochrome B6-F complex Fe-S subunit 9 36 5.9E-6 T 13-10-2018 IPR014909 Cytochrome b6-f complex Fe-S subunit GO:0009496|GO:0042651|GO:0051537|GO:0055114 KEGG: 00195+1.10.9.1|MetaCyc: PWY-101 COP00_05590 c50bbbae3b9e10b22ebc6c3f42dc1116 168 Pfam PF00355 Rieske [2Fe-2S] domain 74 148 8.0E-12 T 13-10-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 COP00_05590 c50bbbae3b9e10b22ebc6c3f42dc1116 168 Gene3D G3DSA:2.102.10.10 46 164 2.6E-22 T 13-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 COP00_13150 c777f7ae8eba2beca3921a700f917770 363 TIGRFAM TIGR00350 lytR_cpsA_psr: cell envelope-related function transcriptional attenuator common domain 93 246 5.0E-58 T 13-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain COP00_13150 c777f7ae8eba2beca3921a700f917770 363 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 94 246 1.5E-52 T 13-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain COP00_13150 c777f7ae8eba2beca3921a700f917770 363 Gene3D G3DSA:1.10.260.150 71 333 2.1E-100 T 13-10-2018 COP00_22535 93bfd36eaa635be35c6c42af2251d593 301 SUPERFAMILY SSF56529 80 300 3.4E-78 T 13-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 COP00_22535 93bfd36eaa635be35c6c42af2251d593 301 Gene3D G3DSA:3.90.850.10 87 301 4.7E-87 T 13-10-2018 IPR036663 Fumarylacetoacetase-like, C-terminal domain superfamily GO:0003824 COP00_22535 93bfd36eaa635be35c6c42af2251d593 301 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 93 300 3.7E-70 T 13-10-2018 IPR011234 Fumarylacetoacetase-like, C-terminal GO:0003824 COP00_09180 829965877f742b684a9aacc34e619840 229 Pfam PF13483 Beta-lactamase superfamily domain 2 193 2.0E-24 T 13-10-2018 COP00_09180 829965877f742b684a9aacc34e619840 229 SUPERFAMILY SSF56281 1 201 2.36E-35 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like COP00_09180 829965877f742b684a9aacc34e619840 229 Gene3D G3DSA:3.60.15.10 1 227 3.8E-72 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like COP00_09180 829965877f742b684a9aacc34e619840 229 Hamap MF_00457 UPF0173 metal-dependent hydrolase . 1 227 37.75 T 13-10-2018 IPR022877 Protein of unknown funcion UPF0173 COP00_09180 829965877f742b684a9aacc34e619840 229 SMART SM00849 7 193 9.7E-12 T 13-10-2018 IPR001279 Metallo-beta-lactamase COP00_01315 154b2d9db54b1c480f5059c44caa6919 434 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 336 359 - T 13-10-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 COP00_01315 154b2d9db54b1c480f5059c44caa6919 434 Hamap MF_01037 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO [trmFO]. 5 433 37.138 T 13-10-2018 IPR004417 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO GO:0005737|GO:0008033|GO:0047151|GO:0050660 COP00_01315 154b2d9db54b1c480f5059c44caa6919 434 SUPERFAMILY SSF51905 4 366 9.97E-30 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily COP00_01315 154b2d9db54b1c480f5059c44caa6919 434 TIGRFAM TIGR00137 gid_trmFO: tRNA:m(5)U-54 methyltransferase 3 433 1.6E-243 T 13-10-2018 IPR004417 Methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase TrmFO GO:0005737|GO:0008033|GO:0047151|GO:0050660 COP00_01315 154b2d9db54b1c480f5059c44caa6919 434 Pfam PF01134 Glucose inhibited division protein A 5 367 7.3E-117 T 13-10-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 COP00_01315 154b2d9db54b1c480f5059c44caa6919 434 Gene3D G3DSA:3.50.50.60 290 434 4.2E-53 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily COP00_01315 154b2d9db54b1c480f5059c44caa6919 434 Gene3D G3DSA:3.50.50.60 2 177 1.2E-58 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily COP00_20585 70ca817ccd577f23369c19974a9c0438 518 SUPERFAMILY SSF52540 4 245 5.41E-49 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_20585 70ca817ccd577f23369c19974a9c0438 518 SUPERFAMILY SSF52540 305 506 1.33E-36 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_20585 70ca817ccd577f23369c19974a9c0438 518 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 COP00_20585 70ca817ccd577f23369c19974a9c0438 518 Gene3D G3DSA:3.40.50.300 3 285 2.8E-67 T 13-10-2018 COP00_20585 70ca817ccd577f23369c19974a9c0438 518 Pfam PF12848 ABC transporter 230 315 5.0E-22 T 13-10-2018 IPR032781 ABC-transporter extension domain COP00_20585 70ca817ccd577f23369c19974a9c0438 518 Gene3D G3DSA:3.40.50.300 289 515 6.0E-44 T 13-10-2018 COP00_20585 70ca817ccd577f23369c19974a9c0438 518 ProSitePatterns PS00211 ABC transporters family signature. 441 455 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 COP00_20585 70ca817ccd577f23369c19974a9c0438 518 Pfam PF00005 ABC transporter 20 191 1.9E-27 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 COP00_20585 70ca817ccd577f23369c19974a9c0438 518 Pfam PF00005 ABC transporter 342 469 1.0E-20 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 COP00_20585 70ca817ccd577f23369c19974a9c0438 518 SMART SM00382 349 518 3.1E-9 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_20585 70ca817ccd577f23369c19974a9c0438 518 SMART SM00382 28 238 2.2E-9 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_17205 018dc1051679bd903ebedd7737130354 82 Pfam PF17334 Sigma-G-dependent sporulation-specific SASP protein 1 82 4.7E-35 T 13-10-2018 IPR020255 Sigma-G-dependent sporulation-specific SASP protein COP00_17205 018dc1051679bd903ebedd7737130354 82 ProDom PD059965 SASP SPORULATION-SPECIFIC SIGMA-G-DEPENDENT SPORULATION SPECIFIC CSGA 1 81 1.0E-25 T 13-10-2018 IPR020255 Sigma-G-dependent sporulation-specific SASP protein COP00_18835 6cc5f066cf3b5189a02179bbbb3ba319 694 SUPERFAMILY SSF56322 210 682 8.37E-132 T 13-10-2018 IPR005801 ADC synthase GO:0009058 COP00_18835 6cc5f066cf3b5189a02179bbbb3ba319 694 SUPERFAMILY SSF52317 3 188 2.45E-51 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like COP00_18835 6cc5f066cf3b5189a02179bbbb3ba319 694 PRINTS PR00097 Anthranilate synthase component II signature 3 17 4.8E-30 T 13-10-2018 COP00_18835 6cc5f066cf3b5189a02179bbbb3ba319 694 PRINTS PR00097 Anthranilate synthase component II signature 164 177 4.8E-30 T 13-10-2018 COP00_18835 6cc5f066cf3b5189a02179bbbb3ba319 694 PRINTS PR00097 Anthranilate synthase component II signature 121 133 4.8E-30 T 13-10-2018 COP00_18835 6cc5f066cf3b5189a02179bbbb3ba319 694 PRINTS PR00097 Anthranilate synthase component II signature 48 57 4.8E-30 T 13-10-2018 COP00_18835 6cc5f066cf3b5189a02179bbbb3ba319 694 PRINTS PR00097 Anthranilate synthase component II signature 101 109 4.8E-30 T 13-10-2018 COP00_18835 6cc5f066cf3b5189a02179bbbb3ba319 694 PRINTS PR00097 Anthranilate synthase component II signature 76 87 4.8E-30 T 13-10-2018 COP00_18835 6cc5f066cf3b5189a02179bbbb3ba319 694 PRINTS PR00096 Glutamine amidotransferase superfamily signature 48 57 4.5E-12 T 13-10-2018 COP00_18835 6cc5f066cf3b5189a02179bbbb3ba319 694 PRINTS PR00096 Glutamine amidotransferase superfamily signature 76 87 4.5E-12 T 13-10-2018 COP00_18835 6cc5f066cf3b5189a02179bbbb3ba319 694 PRINTS PR00096 Glutamine amidotransferase superfamily signature 164 177 4.5E-12 T 13-10-2018 COP00_18835 6cc5f066cf3b5189a02179bbbb3ba319 694 Gene3D G3DSA:3.60.120.10 200 692 1.2E-152 T 13-10-2018 IPR005801 ADC synthase GO:0009058 COP00_18835 6cc5f066cf3b5189a02179bbbb3ba319 694 Pfam PF04715 Anthranilate synthase component I, N terminal region 233 365 4.3E-19 T 13-10-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 COP00_18835 6cc5f066cf3b5189a02179bbbb3ba319 694 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 45 59 8.6E-6 T 13-10-2018 COP00_18835 6cc5f066cf3b5189a02179bbbb3ba319 694 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 76 92 8.6E-6 T 13-10-2018 COP00_18835 6cc5f066cf3b5189a02179bbbb3ba319 694 Gene3D G3DSA:3.40.50.880 1 197 2.3E-61 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like COP00_18835 6cc5f066cf3b5189a02179bbbb3ba319 694 Pfam PF00425 chorismate binding enzyme 421 674 2.0E-91 T 13-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal COP00_18835 6cc5f066cf3b5189a02179bbbb3ba319 694 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 3 184 7.5E-51 T 13-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 COP00_18835 6cc5f066cf3b5189a02179bbbb3ba319 694 Pfam PF00117 Glutamine amidotransferase class-I 4 184 4.1E-43 T 13-10-2018 IPR017926 Glutamine amidotransferase COP00_18835 6cc5f066cf3b5189a02179bbbb3ba319 694 TIGRFAM TIGR00553 pabB: aminodeoxychorismate synthase, component I 321 677 1.4E-108 T 13-10-2018 IPR005802 Para-aminobenzoate synthase, component I GO:0009396 KEGG: 00790+2.6.1.85|MetaCyc: PWY-6543 COP00_15045 ef5ce7f6c5dc54325c92c0ae224b4257 66 SMART SM00530 4 59 5.6E-15 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 COP00_15045 ef5ce7f6c5dc54325c92c0ae224b4257 66 Pfam PF01381 Helix-turn-helix 5 56 1.4E-15 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 COP00_15045 ef5ce7f6c5dc54325c92c0ae224b4257 66 Gene3D G3DSA:1.10.260.40 1 65 2.8E-27 T 13-10-2018 COP00_15045 ef5ce7f6c5dc54325c92c0ae224b4257 66 SUPERFAMILY SSF47413 2 64 9.12E-19 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 COP00_14600 525c255e15025096cab56c9f352ddad8 363 Gene3D G3DSA:3.40.50.2000 3 185 3.3E-107 T 13-10-2018 COP00_14600 525c255e15025096cab56c9f352ddad8 363 Gene3D G3DSA:3.40.50.2000 186 327 3.3E-107 T 13-10-2018 COP00_14600 525c255e15025096cab56c9f352ddad8 363 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 29 356 2.1E-92 T 13-10-2018 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 COP00_14600 525c255e15025096cab56c9f352ddad8 363 SUPERFAMILY SSF53756 1 358 7.38E-98 T 13-10-2018 COP00_14600 525c255e15025096cab56c9f352ddad8 363 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 1 353 2.2E-84 T 13-10-2018 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 COP00_21880 503284ba40472d4365ecd923cf2df3dd 266 PIRSF PIRSF009141 1 258 1.3E-122 T 13-10-2018 IPR008535 Protein of unknown function DUF817 COP00_21880 503284ba40472d4365ecd923cf2df3dd 266 Pfam PF05675 Protein of unknown function (DUF817) 3 237 1.3E-104 T 13-10-2018 IPR008535 Protein of unknown function DUF817 COP00_04135 c4a7aaa212f38e85b502c9d5e8356fc6 393 Gene3D G3DSA:3.20.20.70 23 232 7.8E-9 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 COP00_04135 c4a7aaa212f38e85b502c9d5e8356fc6 393 SUPERFAMILY SSF51445 43 306 9.37E-22 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily COP00_04135 c4a7aaa212f38e85b502c9d5e8356fc6 393 Pfam PF02638 Glycosyl hydrolase-like 10 12 333 9.8E-116 T 13-10-2018 IPR003790 Glycosyl hydrolase-like 10 COP00_21000 31f6f2e72a56bac30fcfdc6bdf78bff5 449 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 196 416 3.1E-53 T 13-10-2018 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 COP00_21000 31f6f2e72a56bac30fcfdc6bdf78bff5 449 Gene3D G3DSA:3.40.50.720 2 167 6.9E-58 T 13-10-2018 COP00_21000 31f6f2e72a56bac30fcfdc6bdf78bff5 449 ProSitePatterns PS01324 Glycosyl hydrolases family 4 signature. 139 170 - T 13-10-2018 IPR019802 Glycoside hydrolase, family 4, conserved site GO:0004553|GO:0005975 COP00_21000 31f6f2e72a56bac30fcfdc6bdf78bff5 449 SUPERFAMILY SSF56327 169 441 7.41E-95 T 13-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 COP00_21000 31f6f2e72a56bac30fcfdc6bdf78bff5 449 Gene3D G3DSA:3.90.110.10 168 445 1.3E-108 T 13-10-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 COP00_21000 31f6f2e72a56bac30fcfdc6bdf78bff5 449 SUPERFAMILY SSF51735 4 165 1.13E-53 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily COP00_21000 31f6f2e72a56bac30fcfdc6bdf78bff5 449 Pfam PF02056 Family 4 glycosyl hydrolase 6 185 3.8E-67 T 13-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 COP00_21000 31f6f2e72a56bac30fcfdc6bdf78bff5 449 PRINTS PR00732 Glycosyl hydrolase family 4 signature 165 176 5.1E-58 T 13-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 COP00_21000 31f6f2e72a56bac30fcfdc6bdf78bff5 449 PRINTS PR00732 Glycosyl hydrolase family 4 signature 192 204 5.1E-58 T 13-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 COP00_21000 31f6f2e72a56bac30fcfdc6bdf78bff5 449 PRINTS PR00732 Glycosyl hydrolase family 4 signature 6 21 5.1E-58 T 13-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 COP00_21000 31f6f2e72a56bac30fcfdc6bdf78bff5 449 PRINTS PR00732 Glycosyl hydrolase family 4 signature 96 109 5.1E-58 T 13-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 COP00_21000 31f6f2e72a56bac30fcfdc6bdf78bff5 449 PRINTS PR00732 Glycosyl hydrolase family 4 signature 139 156 5.1E-58 T 13-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 COP00_21000 31f6f2e72a56bac30fcfdc6bdf78bff5 449 PRINTS PR00732 Glycosyl hydrolase family 4 signature 75 91 5.1E-58 T 13-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 COP00_21000 31f6f2e72a56bac30fcfdc6bdf78bff5 449 PRINTS PR00732 Glycosyl hydrolase family 4 signature 110 130 5.1E-58 T 13-10-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 COP00_21800 545ca51670b1a42eb9b60564544f3e34 542 SUPERFAMILY SSF53383 48 535 7.88E-74 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase COP00_21800 545ca51670b1a42eb9b60564544f3e34 542 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 101 430 8.3E-24 T 13-10-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 COP00_21800 545ca51670b1a42eb9b60564544f3e34 542 Gene3D G3DSA:3.40.640.10 101 408 2.7E-55 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 COP00_14775 abcbd5e1138b32816b1b67287bbbd7c8 474 Gene3D G3DSA:1.20.200.10 141 408 2.0E-115 T 13-10-2018 COP00_14775 abcbd5e1138b32816b1b67287bbbd7c8 474 Pfam PF00206 Lyase 14 343 2.1E-115 T 13-10-2018 IPR022761 Fumarate lyase, N-terminal COP00_14775 abcbd5e1138b32816b1b67287bbbd7c8 474 PRINTS PR00145 Argininosuccinate lyase family signature 176 196 3.3E-6 T 13-10-2018 COP00_14775 abcbd5e1138b32816b1b67287bbbd7c8 474 PRINTS PR00145 Argininosuccinate lyase family signature 318 334 3.3E-6 T 13-10-2018 COP00_14775 abcbd5e1138b32816b1b67287bbbd7c8 474 TIGRFAM TIGR00839 aspA: aspartate ammonia-lyase 7 469 2.8E-249 T 13-10-2018 IPR004708 Aspartate ammonia-lyase GO:0006531|GO:0008797 KEGG: 00250+4.3.1.1 COP00_14775 abcbd5e1138b32816b1b67287bbbd7c8 474 Gene3D G3DSA:1.10.40.30 409 460 5.0E-21 T 13-10-2018 COP00_14775 abcbd5e1138b32816b1b67287bbbd7c8 474 PRINTS PR00149 Fumarate lyase superfamily signature 136 154 2.4E-32 T 13-10-2018 IPR000362 Fumarate lyase family COP00_14775 abcbd5e1138b32816b1b67287bbbd7c8 474 PRINTS PR00149 Fumarate lyase superfamily signature 181 199 2.4E-32 T 13-10-2018 IPR000362 Fumarate lyase family COP00_14775 abcbd5e1138b32816b1b67287bbbd7c8 474 PRINTS PR00149 Fumarate lyase superfamily signature 272 299 2.4E-32 T 13-10-2018 IPR000362 Fumarate lyase family COP00_14775 abcbd5e1138b32816b1b67287bbbd7c8 474 PRINTS PR00149 Fumarate lyase superfamily signature 318 334 2.4E-32 T 13-10-2018 IPR000362 Fumarate lyase family COP00_14775 abcbd5e1138b32816b1b67287bbbd7c8 474 Gene3D G3DSA:1.10.275.10 7 140 8.4E-58 T 13-10-2018 IPR024083 Fumarase/histidase, N-terminal COP00_14775 abcbd5e1138b32816b1b67287bbbd7c8 474 ProSitePatterns PS00163 Fumarate lyases signature. 318 327 - T 13-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 COP00_14775 abcbd5e1138b32816b1b67287bbbd7c8 474 Pfam PF10415 Fumarase C C-terminus 410 462 6.9E-19 T 13-10-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 COP00_14775 abcbd5e1138b32816b1b67287bbbd7c8 474 SUPERFAMILY SSF48557 6 461 2.2E-149 T 13-10-2018 IPR008948 L-Aspartase-like GO:0003824 COP00_05260 a06ddd8d8e7d327134161aa359580f17 559 Gene3D G3DSA:3.30.1510.10 132 250 5.0E-201 T 13-10-2018 COP00_05260 a06ddd8d8e7d327134161aa359580f17 559 Hamap MF_01543 Formate--tetrahydrofolate ligase [fhs]. 4 559 48.312 T 13-10-2018 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 COP00_05260 a06ddd8d8e7d327134161aa359580f17 559 Gene3D G3DSA:3.10.410.10 446 535 3.0E-33 T 13-10-2018 COP00_05260 a06ddd8d8e7d327134161aa359580f17 559 Gene3D G3DSA:3.40.50.300 9 441 5.0E-201 T 13-10-2018 COP00_05260 a06ddd8d8e7d327134161aa359580f17 559 ProSitePatterns PS00722 Formate--tetrahydrofolate ligase signature 2. 331 342 - T 13-10-2018 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 COP00_05260 a06ddd8d8e7d327134161aa359580f17 559 Pfam PF01268 Formate--tetrahydrofolate ligase 6 559 1.6E-263 T 13-10-2018 IPR000559 Formate-tetrahydrofolate ligase, FTHFS GO:0004329|GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 COP00_05260 a06ddd8d8e7d327134161aa359580f17 559 SUPERFAMILY SSF52540 7 557 1.37E-239 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_05260 a06ddd8d8e7d327134161aa359580f17 559 ProSitePatterns PS00721 Formate--tetrahydrofolate ligase signature 1. 106 116 - T 13-10-2018 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site GO:0005524 KEGG: 00670+6.3.4.3|KEGG: 00720+6.3.4.3|MetaCyc: PWY-1722|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 COP00_07070 b1595147a3812ee163d57f327b2367d9 372 Gene3D G3DSA:3.20.20.20 1 261 5.1E-112 T 13-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 COP00_07070 b1595147a3812ee163d57f327b2367d9 372 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 9 352 9.1E-133 T 13-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 COP00_07070 b1595147a3812ee163d57f327b2367d9 372 PIRSF PIRSF004640 1 363 9.0E-158 T 13-10-2018 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 COP00_07070 b1595147a3812ee163d57f327b2367d9 372 SUPERFAMILY SSF51717 17 214 4.16E-18 T 13-10-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 COP00_07070 b1595147a3812ee163d57f327b2367d9 372 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 7 357 35.131 T 13-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 COP00_07070 b1595147a3812ee163d57f327b2367d9 372 Pfam PF04551 GcpE protein 12 353 3.1E-141 T 13-10-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 COP00_07070 b1595147a3812ee163d57f327b2367d9 372 SUPERFAMILY SSF56014 266 361 2.04E-14 T 13-10-2018 COP00_07070 b1595147a3812ee163d57f327b2367d9 372 Gene3D G3DSA:3.30.413.10 263 362 1.8E-35 T 13-10-2018 COP00_11990 f6b434e32a7d255c2986cc5eea1b8988 394 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 8 393 43.309 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 COP00_11990 f6b434e32a7d255c2986cc5eea1b8988 394 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 15 25 - T 13-10-2018 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 COP00_11990 f6b434e32a7d255c2986cc5eea1b8988 394 Gene3D G3DSA:3.40.50.1260 169 383 3.8E-168 T 13-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 COP00_11990 f6b434e32a7d255c2986cc5eea1b8988 394 SUPERFAMILY SSF53748 1 393 2.71E-165 T 13-10-2018 IPR036043 Phosphoglycerate kinase superfamily GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 COP00_11990 f6b434e32a7d255c2986cc5eea1b8988 394 Gene3D G3DSA:3.40.50.1260 7 391 3.8E-168 T 13-10-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 COP00_11990 f6b434e32a7d255c2986cc5eea1b8988 394 PIRSF PIRSF000724 1 394 9.4E-162 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 COP00_11990 f6b434e32a7d255c2986cc5eea1b8988 394 PRINTS PR00477 Phosphoglycerate kinase family signature 10 26 1.4E-98 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 COP00_11990 f6b434e32a7d255c2986cc5eea1b8988 394 PRINTS PR00477 Phosphoglycerate kinase family signature 369 386 1.4E-98 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 COP00_11990 f6b434e32a7d255c2986cc5eea1b8988 394 PRINTS PR00477 Phosphoglycerate kinase family signature 31 53 1.4E-98 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 COP00_11990 f6b434e32a7d255c2986cc5eea1b8988 394 PRINTS PR00477 Phosphoglycerate kinase family signature 190 209 1.4E-98 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 COP00_11990 f6b434e32a7d255c2986cc5eea1b8988 394 PRINTS PR00477 Phosphoglycerate kinase family signature 346 357 1.4E-98 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 COP00_11990 f6b434e32a7d255c2986cc5eea1b8988 394 PRINTS PR00477 Phosphoglycerate kinase family signature 109 124 1.4E-98 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 COP00_11990 f6b434e32a7d255c2986cc5eea1b8988 394 PRINTS PR00477 Phosphoglycerate kinase family signature 312 337 1.4E-98 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 COP00_11990 f6b434e32a7d255c2986cc5eea1b8988 394 PRINTS PR00477 Phosphoglycerate kinase family signature 137 159 1.4E-98 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 COP00_11990 f6b434e32a7d255c2986cc5eea1b8988 394 PRINTS PR00477 Phosphoglycerate kinase family signature 167 189 1.4E-98 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 COP00_11990 f6b434e32a7d255c2986cc5eea1b8988 394 Pfam PF00162 Phosphoglycerate kinase 6 383 9.4E-167 T 13-10-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 COP00_08430 31ab4f7dc42911d233b149b0b524c232 102 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 102 27.014 T 13-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_08430 31ab4f7dc42911d233b149b0b524c232 102 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 101 1.8E-41 T 13-10-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_08430 31ab4f7dc42911d233b149b0b524c232 102 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 100 3.5E-40 T 13-10-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_08430 31ab4f7dc42911d233b149b0b524c232 102 SUPERFAMILY SSF141091 1 101 1.44E-38 T 13-10-2018 IPR036164 L21-like superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_08430 31ab4f7dc42911d233b149b0b524c232 102 ProSitePatterns PS01169 Ribosomal protein L21 signature. 71 93 - T 13-10-2018 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 COP00_10605 fb66c15ecbda7f100235910383a84c8a 79 PIRSF PIRSF037793 1 79 3.9E-29 T 13-10-2018 IPR014921 EsaB COP00_10605 fb66c15ecbda7f100235910383a84c8a 79 SUPERFAMILY SSF54236 5 78 9.16E-5 T 13-10-2018 IPR029071 Ubiquitin-like domain superfamily COP00_10605 fb66c15ecbda7f100235910383a84c8a 79 Pfam PF08817 WXG100 protein secretion system (Wss), protein YukD 2 78 6.7E-14 T 13-10-2018 IPR024962 YukD-like COP00_10605 fb66c15ecbda7f100235910383a84c8a 79 Gene3D G3DSA:3.10.20.90 1 79 1.9E-41 T 13-10-2018 COP00_13980 19a63aecc984361d7ceda30e08e83cc8 124 Gene3D G3DSA:3.40.50.2300 1 123 1.1E-43 T 13-10-2018 COP00_13980 19a63aecc984361d7ceda30e08e83cc8 124 Pfam PF00072 Response regulator receiver domain 5 115 7.6E-30 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 COP00_13980 19a63aecc984361d7ceda30e08e83cc8 124 SUPERFAMILY SSF52172 4 119 8.68E-36 T 13-10-2018 IPR011006 CheY-like superfamily COP00_13980 19a63aecc984361d7ceda30e08e83cc8 124 SMART SM00448 3 114 1.5E-31 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 COP00_07045 c3ec2cafce39bc72bcd5605fc628549d 428 Pfam PF07690 Major Facilitator Superfamily 61 338 4.8E-17 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 COP00_07045 c3ec2cafce39bc72bcd5605fc628549d 428 SUPERFAMILY SSF103473 14 397 9.59E-30 T 13-10-2018 IPR036259 MFS transporter superfamily COP00_07045 c3ec2cafce39bc72bcd5605fc628549d 428 Gene3D G3DSA:1.20.1250.20 11 397 6.4E-22 T 13-10-2018 COP00_23885 32d3c8315e078bf022c4db4c387f7ff0 307 Gene3D G3DSA:3.40.50.10740 2 155 1.2E-57 T 13-10-2018 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal COP00_23885 32d3c8315e078bf022c4db4c387f7ff0 307 Pfam PF02016 LD-carboxypeptidase 14 291 2.5E-83 T 13-10-2018 IPR003507 Peptidase family S66 COP00_23885 32d3c8315e078bf022c4db4c387f7ff0 307 SUPERFAMILY SSF52317 4 156 2.2E-51 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like COP00_23885 32d3c8315e078bf022c4db4c387f7ff0 307 PIRSF PIRSF028757 2 306 3.3E-92 T 13-10-2018 IPR003507 Peptidase family S66 COP00_23885 32d3c8315e078bf022c4db4c387f7ff0 307 Gene3D G3DSA:3.50.30.60 156 307 2.4E-42 T 13-10-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily COP00_23885 32d3c8315e078bf022c4db4c387f7ff0 307 SUPERFAMILY SSF141986 145 299 1.16E-41 T 13-10-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain superfamily COP00_16925 d0cab30c17920434816cccb5b374627d 391 SUPERFAMILY SSF56601 82 372 1.69E-71 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like COP00_16925 d0cab30c17920434816cccb5b374627d 391 Gene3D G3DSA:3.40.710.10 80 380 8.2E-70 T 13-10-2018 COP00_16925 d0cab30c17920434816cccb5b374627d 391 Pfam PF00144 Beta-lactamase 96 383 8.2E-46 T 13-10-2018 IPR001466 Beta-lactamase-related COP00_24080 5a56eb697b555d9f2f67524405f3a1d4 297 Gene3D G3DSA:3.30.2010.10 80 173 8.1E-31 T 13-10-2018 COP00_24080 5a56eb697b555d9f2f67524405f3a1d4 297 Hamap MF_00188 Protease HtpX [htpX]. 2 297 24.416 T 13-10-2018 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 COP00_24080 5a56eb697b555d9f2f67524405f3a1d4 297 Pfam PF01435 Peptidase family M48 89 296 1.9E-38 T 13-10-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 COP00_17595 0a52a875efd2f628398263f4d368f27d 253 Pfam PF13623 SurA N-terminal domain 61 156 2.4E-16 T 13-10-2018 COP00_17595 0a52a875efd2f628398263f4d368f27d 253 SUPERFAMILY SSF109998 64 219 3.01E-30 T 13-10-2018 IPR027304 Trigger factor/SurA domain superfamily COP00_17595 0a52a875efd2f628398263f4d368f27d 253 Gene3D G3DSA:1.10.4030.30 60 252 2.0E-29 T 13-10-2018 COP00_24415 e8cb326f68e1eaaf9c7e30afa65db068 186 SUPERFAMILY SSF52540 1 183 2.25E-7 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_24415 e8cb326f68e1eaaf9c7e30afa65db068 186 Gene3D G3DSA:3.40.50.300 1 186 4.0E-30 T 13-10-2018 COP00_00040 d933c3c5fd109e173547502e066aaac8 193 TIGRFAM TIGR01603 maj_tail_phi13: phage major tail protein, phi13 family 5 190 4.3E-44 T 13-10-2018 IPR006490 Phage major tail protein, phi13 family COP00_24555 d933c3c5fd109e173547502e066aaac8 193 TIGRFAM TIGR01603 maj_tail_phi13: phage major tail protein, phi13 family 5 190 4.3E-44 T 13-10-2018 IPR006490 Phage major tail protein, phi13 family COP00_12355 d933c3c5fd109e173547502e066aaac8 193 TIGRFAM TIGR01603 maj_tail_phi13: phage major tail protein, phi13 family 5 190 4.3E-44 T 13-10-2018 IPR006490 Phage major tail protein, phi13 family COP00_05180 c46a71e2ed086e874d484f0d3b02a412 280 SUPERFAMILY SSF82549 3 280 3.14E-89 T 13-10-2018 COP00_05180 c46a71e2ed086e874d484f0d3b02a412 280 Gene3D G3DSA:3.40.50.10170 2 152 2.0E-52 T 13-10-2018 COP00_05180 c46a71e2ed086e874d484f0d3b02a412 280 Gene3D G3DSA:3.30.1180.10 153 279 3.3E-35 T 13-10-2018 COP00_05180 c46a71e2ed086e874d484f0d3b02a412 280 Pfam PF02645 Uncharacterised protein, DegV family COG1307 4 279 1.5E-89 T 13-10-2018 IPR003797 DegV COP00_05180 c46a71e2ed086e874d484f0d3b02a412 280 TIGRFAM TIGR00762 DegV: EDD domain protein, DegV family 4 278 5.1E-99 T 13-10-2018 IPR003797 DegV COP00_00585 a10156e3dbb391dbf1b54584852ae451 91 PIRSF PIRSF037260 1 91 1.7E-40 T 13-10-2018 IPR007920 Protein of unknown function UPF0223 COP00_00585 a10156e3dbb391dbf1b54584852ae451 91 SUPERFAMILY SSF158504 6 86 6.41E-34 T 13-10-2018 IPR023324 BH2638-like superfamily COP00_00585 a10156e3dbb391dbf1b54584852ae451 91 Hamap MF_01041 UPF0223 protein . 3 91 25.996 T 13-10-2018 IPR007920 Protein of unknown function UPF0223 COP00_00585 a10156e3dbb391dbf1b54584852ae451 91 ProDom PD062738 UPF0223 FAMILY UNCHARACTERISED CYTOSOLIC SUPERFAMILY YKTA LMO1058/LIN1050 INOSITOL MW0980 M6_SPY0948 5 91 7.0E-41 T 13-10-2018 IPR007920 Protein of unknown function UPF0223 COP00_00585 a10156e3dbb391dbf1b54584852ae451 91 Gene3D G3DSA:1.10.220.80 14 91 1.7E-30 T 13-10-2018 IPR023324 BH2638-like superfamily COP00_00585 a10156e3dbb391dbf1b54584852ae451 91 Pfam PF05256 Uncharacterised protein family (UPF0223) 4 86 2.7E-38 T 13-10-2018 IPR007920 Protein of unknown function UPF0223 COP00_07870 61b14776ff986fe02c814a0ad4b92a15 143 Pfam PF03610 PTS system fructose IIA component 4 115 2.5E-27 T 13-10-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 COP00_07870 61b14776ff986fe02c814a0ad4b92a15 143 Gene3D G3DSA:3.40.50.510 1 143 5.3E-36 T 13-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 COP00_07870 61b14776ff986fe02c814a0ad4b92a15 143 SUPERFAMILY SSF53062 1 132 1.24E-31 T 13-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 COP00_07870 61b14776ff986fe02c814a0ad4b92a15 143 TIGRFAM TIGR00824 EIIA-man: PTS system, mannose/fructose/sorbose family, IIA component 1 116 3.9E-49 T 13-10-2018 IPR013789 Phosphotransferase system, mannose family IIA component GO:0005737|GO:0008643|GO:0016773 COP00_24170 f029d946289fd68146120e7db94fc56f 503 SUPERFAMILY SSF55874 353 497 3.93E-37 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily COP00_24170 f029d946289fd68146120e7db94fc56f 503 Gene3D G3DSA:3.30.450.20 48 226 1.2E-48 T 13-10-2018 COP00_24170 f029d946289fd68146120e7db94fc56f 503 Gene3D G3DSA:1.10.287.130 269 348 4.0E-18 T 13-10-2018 COP00_24170 f029d946289fd68146120e7db94fc56f 503 PRINTS PR00344 Bacterial sensor protein C-terminal signature 448 458 7.6E-17 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 COP00_24170 f029d946289fd68146120e7db94fc56f 503 PRINTS PR00344 Bacterial sensor protein C-terminal signature 430 444 7.6E-17 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 COP00_24170 f029d946289fd68146120e7db94fc56f 503 PRINTS PR00344 Bacterial sensor protein C-terminal signature 483 496 7.6E-17 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 COP00_24170 f029d946289fd68146120e7db94fc56f 503 PRINTS PR00344 Bacterial sensor protein C-terminal signature 459 477 7.6E-17 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 COP00_24170 f029d946289fd68146120e7db94fc56f 503 Pfam PF02743 Cache domain 38 205 1.6E-12 T 13-10-2018 IPR033479 Double Cache domain 1 COP00_24170 f029d946289fd68146120e7db94fc56f 503 Gene3D G3DSA:3.30.450.20 77 174 1.2E-48 T 13-10-2018 COP00_24170 f029d946289fd68146120e7db94fc56f 503 SMART SM00387 393 499 6.3E-32 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase COP00_24170 f029d946289fd68146120e7db94fc56f 503 Gene3D G3DSA:3.30.565.10 354 502 1.9E-40 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily COP00_24170 f029d946289fd68146120e7db94fc56f 503 SUPERFAMILY SSF47384 273 349 2.94E-14 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 COP00_24170 f029d946289fd68146120e7db94fc56f 503 SMART SM00388 285 350 2.8E-16 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 COP00_24170 f029d946289fd68146120e7db94fc56f 503 Pfam PF00512 His Kinase A (phospho-acceptor) domain 287 348 7.1E-16 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 COP00_24170 f029d946289fd68146120e7db94fc56f 503 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 395 497 1.1E-24 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase COP00_05655 3e4ad986ba4c27ba51f8ece4e6e4a082 127 ProDom PD031888 MUTASE CHORISMATE AROH THE CLASS ISOMERASE TRANSCRIPTION BIOSYNTHESIS CM 3D-STRUCTURE 9 127 4.0E-57 T 13-10-2018 IPR008243 Chorismate mutase, AroH class KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 COP00_05655 3e4ad986ba4c27ba51f8ece4e6e4a082 127 Gene3D G3DSA:3.30.1330.40 1 127 1.6E-52 T 13-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 COP00_05655 3e4ad986ba4c27ba51f8ece4e6e4a082 127 Pfam PF07736 Chorismate mutase type I 3 119 1.3E-47 T 13-10-2018 IPR008243 Chorismate mutase, AroH class KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 COP00_05655 3e4ad986ba4c27ba51f8ece4e6e4a082 127 TIGRFAM TIGR01796 CM_mono_aroH: chorismate mutase 3 119 8.6E-47 T 13-10-2018 IPR008243 Chorismate mutase, AroH class KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 COP00_05655 3e4ad986ba4c27ba51f8ece4e6e4a082 127 SUPERFAMILY SSF55298 1 126 1.57E-49 T 13-10-2018 IPR035959 RutC-like superfamily Reactome: R-HSA-8849175 COP00_05655 3e4ad986ba4c27ba51f8ece4e6e4a082 127 PIRSF PIRSF005965 1 125 4.3E-53 T 13-10-2018 IPR008243 Chorismate mutase, AroH class KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 COP00_19380 6d062b18f645e911e354bcb2a32b8647 358 SUPERFAMILY SSF46894 133 228 1.05E-12 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 COP00_19380 6d062b18f645e911e354bcb2a32b8647 358 Pfam PF00072 Response regulator receiver domain 4 112 2.3E-24 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 COP00_19380 6d062b18f645e911e354bcb2a32b8647 358 Gene3D G3DSA:1.10.10.10 126 230 4.4E-14 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_19380 6d062b18f645e911e354bcb2a32b8647 358 Gene3D G3DSA:1.25.40.10 278 356 3.9E-6 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 COP00_19380 6d062b18f645e911e354bcb2a32b8647 358 SUPERFAMILY SSF52172 2 115 8.11E-30 T 13-10-2018 IPR011006 CheY-like superfamily COP00_19380 6d062b18f645e911e354bcb2a32b8647 358 Pfam PF00486 Transcriptional regulatory protein, C terminal 159 228 1.6E-7 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 COP00_19380 6d062b18f645e911e354bcb2a32b8647 358 SUPERFAMILY SSF48452 299 350 1.64E-5 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 COP00_19380 6d062b18f645e911e354bcb2a32b8647 358 SMART SM00862 152 228 4.5E-6 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 COP00_19380 6d062b18f645e911e354bcb2a32b8647 358 SMART SM00448 1 112 3.0E-25 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 COP00_19380 6d062b18f645e911e354bcb2a32b8647 358 Gene3D G3DSA:3.40.50.2300 1 119 2.6E-32 T 13-10-2018 COP00_14730 fbdcf51802f110700ba6dde752e2c7ad 580 Pfam PF00005 ABC transporter 356 503 6.4E-32 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 COP00_14730 fbdcf51802f110700ba6dde752e2c7ad 580 Pfam PF00664 ABC transporter transmembrane region 20 269 3.3E-14 T 13-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 COP00_14730 fbdcf51802f110700ba6dde752e2c7ad 580 SUPERFAMILY SSF90123 2 489 1.7E-44 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 COP00_14730 fbdcf51802f110700ba6dde752e2c7ad 580 TIGRFAM TIGR02868 CydC: thiol reductant ABC exporter, CydC subunit 6 534 7.4E-194 T 13-10-2018 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC GO:0016021|GO:0034775|GO:0042626|GO:0045454 COP00_14730 fbdcf51802f110700ba6dde752e2c7ad 580 ProSitePatterns PS00211 ABC transporters family signature. 476 490 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 COP00_14730 fbdcf51802f110700ba6dde752e2c7ad 580 Gene3D G3DSA:1.20.1560.10 6 316 5.4E-28 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 COP00_14730 fbdcf51802f110700ba6dde752e2c7ad 580 SUPERFAMILY SSF52540 334 573 1.46E-72 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_14730 fbdcf51802f110700ba6dde752e2c7ad 580 Gene3D G3DSA:3.40.50.300 331 577 1.1E-78 T 13-10-2018 COP00_14730 fbdcf51802f110700ba6dde752e2c7ad 580 SMART SM00382 365 550 5.0E-16 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_04855 05cf134e2b6364b27eeffce0ed645c04 178 SUPERFAMILY SSF55729 4 169 4.22E-41 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase COP00_04855 05cf134e2b6364b27eeffce0ed645c04 178 Pfam PF13302 Acetyltransferase (GNAT) domain 7 144 2.5E-22 T 13-10-2018 IPR000182 GNAT domain COP00_04855 05cf134e2b6364b27eeffce0ed645c04 178 Gene3D G3DSA:3.40.630.30 1 177 1.7E-45 T 13-10-2018 COP00_21490 1ea4af8f9b06ab6d0c9abb70ba64d23c 389 Pfam PF04285 Protein of unknown function (DUF444) 196 383 2.6E-66 T 13-10-2018 IPR006698 Uncharacterised protein family UPF0229 COP00_21490 1ea4af8f9b06ab6d0c9abb70ba64d23c 389 Pfam PF04285 Protein of unknown function (DUF444) 11 187 1.7E-32 T 13-10-2018 IPR006698 Uncharacterised protein family UPF0229 COP00_21490 1ea4af8f9b06ab6d0c9abb70ba64d23c 389 TIGRFAM TIGR02877 spore_yhbH: sporulation protein YhbH 9 380 1.1E-183 T 13-10-2018 IPR014230 Sporulation protein YhbH COP00_08835 a6cc60eac63071ac536f3df3ab2db96b 85 Pfam PF05164 Cell division protein ZapA 10 82 4.7E-16 T 13-10-2018 IPR007838 Cell division protein ZapA-like COP00_08835 a6cc60eac63071ac536f3df3ab2db96b 85 SUPERFAMILY SSF102829 10 84 1.96E-20 T 13-10-2018 IPR036192 Cell division protein ZapA-like superfamily COP00_08835 a6cc60eac63071ac536f3df3ab2db96b 85 Hamap MF_02013 Cell division protein ZapA [zapA]. 1 85 27.992 T 13-10-2018 IPR023688 Cell division protein ZapA, firmicutes GO:0051301 COP00_15125 d3b6e9a5ca9ce8573385ae57ad86c148 646 Pfam PF02687 FtsX-like permease family 85 170 2.8E-6 T 13-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 COP00_15125 d3b6e9a5ca9ce8573385ae57ad86c148 646 PIRSF PIRSF018968 1 646 3.3E-153 T 13-10-2018 IPR027022 ABC transporter permease protein, BceB-type GO:0055085 COP00_11575 454a8b2b659fcae99bdbb10a5372ecbf 423 Gene3D G3DSA:3.20.20.80 49 331 2.4E-176 T 13-10-2018 COP00_11575 454a8b2b659fcae99bdbb10a5372ecbf 423 Gene3D G3DSA:2.60.40.1180 38 420 2.4E-176 T 13-10-2018 IPR013780 Glycosyl hydrolase, all-beta COP00_11575 454a8b2b659fcae99bdbb10a5372ecbf 423 Pfam PF02055 Glycosyl hydrolase family 30 TIM-barrel domain 107 178 5.8E-5 T 13-10-2018 IPR033453 Glycosyl hydrolase family 30, TIM-barrel domain Reactome: R-HSA-1660662|Reactome: R-HSA-390471 COP00_11575 454a8b2b659fcae99bdbb10a5372ecbf 423 SUPERFAMILY SSF51011 327 420 6.09E-26 T 13-10-2018 COP00_11575 454a8b2b659fcae99bdbb10a5372ecbf 423 SUPERFAMILY SSF51445 48 331 2.85E-51 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily COP00_17000 7b01f46a5e285c41c02314cb3ea8ba32 303 TIGRFAM TIGR01229 rocF_arginase: arginase 7 303 4.0E-106 T 13-10-2018 IPR014033 Arginase GO:0004053|GO:0006525|GO:0046872 KEGG: 00220+3.5.3.1|KEGG: 00330+3.5.3.1|MetaCyc: PWY-31|MetaCyc: PWY-4984|MetaCyc: PWY-6305|MetaCyc: PWY-6922|Reactome: R-HSA-70635 COP00_17000 7b01f46a5e285c41c02314cb3ea8ba32 303 Pfam PF00491 Arginase family 4 298 1.6E-81 T 13-10-2018 IPR006035 Ureohydrolase GO:0046872 COP00_17000 7b01f46a5e285c41c02314cb3ea8ba32 303 PRINTS PR00116 Arginase signature 122 149 3.7E-44 T 13-10-2018 IPR006035 Ureohydrolase GO:0046872 COP00_17000 7b01f46a5e285c41c02314cb3ea8ba32 303 PRINTS PR00116 Arginase signature 176 194 3.7E-44 T 13-10-2018 IPR006035 Ureohydrolase GO:0046872 COP00_17000 7b01f46a5e285c41c02314cb3ea8ba32 303 PRINTS PR00116 Arginase signature 225 254 3.7E-44 T 13-10-2018 IPR006035 Ureohydrolase GO:0046872 COP00_17000 7b01f46a5e285c41c02314cb3ea8ba32 303 PRINTS PR00116 Arginase signature 99 114 3.7E-44 T 13-10-2018 IPR006035 Ureohydrolase GO:0046872 COP00_17000 7b01f46a5e285c41c02314cb3ea8ba32 303 PRINTS PR00116 Arginase signature 260 274 3.7E-44 T 13-10-2018 IPR006035 Ureohydrolase GO:0046872 COP00_17000 7b01f46a5e285c41c02314cb3ea8ba32 303 PIRSF PIRSF036979 2 299 7.7E-37 T 13-10-2018 IPR006035 Ureohydrolase GO:0046872 COP00_17000 7b01f46a5e285c41c02314cb3ea8ba32 303 SUPERFAMILY SSF52768 4 300 9.0E-94 T 13-10-2018 IPR023696 Ureohydrolase domain superfamily COP00_17000 7b01f46a5e285c41c02314cb3ea8ba32 303 ProSitePatterns PS01053 Arginase family signature. 228 249 - T 13-10-2018 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 COP00_17000 7b01f46a5e285c41c02314cb3ea8ba32 303 Gene3D G3DSA:3.40.800.10 2 303 4.9E-116 T 13-10-2018 COP00_24135 b858348bf1c817be8e972c9a4e3eba5f 396 Pfam PF00155 Aminotransferase class I and II 33 383 4.1E-65 T 13-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 COP00_24135 b858348bf1c817be8e972c9a4e3eba5f 396 Gene3D G3DSA:3.90.1150.10 23 383 4.7E-117 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 COP00_24135 b858348bf1c817be8e972c9a4e3eba5f 396 SUPERFAMILY SSF53383 5 386 2.04E-105 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase COP00_24135 b858348bf1c817be8e972c9a4e3eba5f 396 Gene3D G3DSA:3.40.640.10 44 285 4.7E-117 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 COP00_22065 6f654efdccaaa7d62e25f84c2b69d81f 257 Pfam PF00378 Enoyl-CoA hydratase/isomerase 10 254 1.8E-50 T 13-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 COP00_22065 6f654efdccaaa7d62e25f84c2b69d81f 257 Gene3D G3DSA:3.90.226.10 1 192 2.7E-54 T 13-10-2018 COP00_22065 6f654efdccaaa7d62e25f84c2b69d81f 257 Gene3D G3DSA:1.10.12.10 199 255 1.5E-17 T 13-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal COP00_22065 6f654efdccaaa7d62e25f84c2b69d81f 257 SUPERFAMILY SSF52096 3 256 7.29E-69 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily COP00_10100 677cc262c29c51e91eed05ad30f1b04e 215 ProSitePatterns PS01333 Pyrrolidone-carboxylate peptidase glutamic acid active site. 70 86 - T 13-10-2018 IPR033693 Pyroglutamyl peptidase I, Glu active site MetaCyc: PWY-7942 COP00_10100 677cc262c29c51e91eed05ad30f1b04e 215 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 163 175 1.1E-48 T 13-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 COP00_10100 677cc262c29c51e91eed05ad30f1b04e 215 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 5 28 1.1E-48 T 13-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 COP00_10100 677cc262c29c51e91eed05ad30f1b04e 215 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 63 75 1.1E-48 T 13-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 COP00_10100 677cc262c29c51e91eed05ad30f1b04e 215 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 81 101 1.1E-48 T 13-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 COP00_10100 677cc262c29c51e91eed05ad30f1b04e 215 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 133 149 1.1E-48 T 13-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 COP00_10100 677cc262c29c51e91eed05ad30f1b04e 215 Hamap MF_00417 Pyrrolidone-carboxylate peptidase [pcp]. 3 199 41.26 T 13-10-2018 IPR029762 Pyroglutamyl peptidase I, bacterial-type GO:0005829|GO:0006508|GO:0008234|GO:0016920 MetaCyc: PWY-7942 COP00_10100 677cc262c29c51e91eed05ad30f1b04e 215 Pfam PF01470 Pyroglutamyl peptidase 3 202 2.0E-87 T 13-10-2018 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like MetaCyc: PWY-7942 COP00_10100 677cc262c29c51e91eed05ad30f1b04e 215 TIGRFAM TIGR00504 pyro_pdase: pyroglutamyl-peptidase I 4 214 8.5E-93 T 13-10-2018 IPR029762 Pyroglutamyl peptidase I, bacterial-type GO:0005829|GO:0006508|GO:0008234|GO:0016920 MetaCyc: PWY-7942 COP00_10100 677cc262c29c51e91eed05ad30f1b04e 215 SUPERFAMILY SSF53182 2 208 4.84E-74 T 13-10-2018 IPR036440 Peptidase C15, pyroglutamyl peptidase I-like superfamily MetaCyc: PWY-7942 COP00_10100 677cc262c29c51e91eed05ad30f1b04e 215 ProSitePatterns PS01334 Pyrrolidone-carboxylate peptidase cysteine active site. 131 145 - T 13-10-2018 IPR033694 Pyroglutamyl peptidase I, Cys active site MetaCyc: PWY-7942 COP00_10100 677cc262c29c51e91eed05ad30f1b04e 215 Gene3D G3DSA:3.40.630.20 1 215 5.6E-86 T 13-10-2018 IPR036440 Peptidase C15, pyroglutamyl peptidase I-like superfamily MetaCyc: PWY-7942 COP00_10100 677cc262c29c51e91eed05ad30f1b04e 215 PIRSF PIRSF015592 2 213 1.8E-85 T 13-10-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 MetaCyc: PWY-7942 COP00_04060 ac840ed934e5217d9f1db57f9f5e6448 649 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 515 648 1.4E-28 T 13-10-2018 IPR002178 PTS EIIA type-2 domain COP00_04060 ac840ed934e5217d9f1db57f9f5e6448 649 SUPERFAMILY SSF52794 409 485 5.23E-7 T 13-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 COP00_04060 ac840ed934e5217d9f1db57f9f5e6448 649 SUPERFAMILY SSF55804 510 647 1.96E-29 T 13-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 COP00_04060 ac840ed934e5217d9f1db57f9f5e6448 649 Gene3D G3DSA:1.10.1790.10 300 400 8.0E-21 T 13-10-2018 COP00_04060 ac840ed934e5217d9f1db57f9f5e6448 649 Gene3D G3DSA:3.40.930.10 509 648 6.5E-29 T 13-10-2018 IPR016152 Phosphotransferase/anion transporter Reactome: R-HSA-425381 COP00_04060 ac840ed934e5217d9f1db57f9f5e6448 649 Gene3D G3DSA:3.40.50.2300 409 493 8.5E-10 T 13-10-2018 COP00_04060 ac840ed934e5217d9f1db57f9f5e6448 649 SUPERFAMILY SSF63520 305 401 2.49E-20 T 13-10-2018 IPR036634 PRD domain superfamily GO:0006355 COP00_04060 ac840ed934e5217d9f1db57f9f5e6448 649 Gene3D G3DSA:1.10.10.10 2 155 2.5E-14 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_04060 ac840ed934e5217d9f1db57f9f5e6448 649 Pfam PF00874 PRD domain 313 398 8.1E-20 T 13-10-2018 IPR011608 PRD domain GO:0006355 COP00_04060 ac840ed934e5217d9f1db57f9f5e6448 649 Pfam PF00874 PRD domain 199 282 2.0E-15 T 13-10-2018 IPR011608 PRD domain GO:0006355 COP00_04060 ac840ed934e5217d9f1db57f9f5e6448 649 SUPERFAMILY SSF63520 191 283 2.22E-17 T 13-10-2018 IPR036634 PRD domain superfamily GO:0006355 COP00_04060 ac840ed934e5217d9f1db57f9f5e6448 649 Gene3D G3DSA:1.10.1790.10 189 287 1.4E-12 T 13-10-2018 COP00_04060 ac840ed934e5217d9f1db57f9f5e6448 649 Pfam PF05043 Mga helix-turn-helix domain 103 163 2.6E-7 T 13-10-2018 IPR007737 Mga helix-turn-helix domain COP00_04060 ac840ed934e5217d9f1db57f9f5e6448 649 Pfam PF08279 HTH domain 7 65 1.0E-7 T 13-10-2018 IPR013196 Helix-turn-helix, type 11 COP00_04060 ac840ed934e5217d9f1db57f9f5e6448 649 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 556 572 - T 13-10-2018 IPR002178 PTS EIIA type-2 domain COP00_05525 fce04212d05838b3170df73c0c027f27 277 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 2 263 43.631 T 13-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 COP00_05525 fce04212d05838b3170df73c0c027f27 277 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 1 264 4.0E-126 T 13-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 COP00_05525 fce04212d05838b3170df73c0c027f27 277 SUPERFAMILY SSF51621 3 263 4.93E-108 T 13-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 COP00_05525 fce04212d05838b3170df73c0c027f27 277 PIRSF PIRSF000388 1 266 1.6E-111 T 13-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 COP00_05525 fce04212d05838b3170df73c0c027f27 277 Gene3D G3DSA:3.20.20.60 2 272 1.5E-115 T 13-10-2018 COP00_05525 fce04212d05838b3170df73c0c027f27 277 Pfam PF02548 Ketopantoate hydroxymethyltransferase 5 258 6.9E-114 T 13-10-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 COP00_05095 711d05c7f1548228efd1b7fcad6a6a1e 424 TIGRFAM TIGR01910 DapE-ArgE: peptidase, ArgE/DapE family 20 409 4.5E-128 T 13-10-2018 IPR010182 N-formyl-4-amino-5-aminomethyl-2-methylpyrimidine deformylase/Succinyl-diaminopimelate desuccinylase COP00_05095 711d05c7f1548228efd1b7fcad6a6a1e 424 Gene3D G3DSA:3.40.630.10 28 418 6.5E-137 T 13-10-2018 COP00_05095 711d05c7f1548228efd1b7fcad6a6a1e 424 SUPERFAMILY SSF53187 6 419 7.43E-61 T 13-10-2018 COP00_05095 711d05c7f1548228efd1b7fcad6a6a1e 424 Pfam PF07687 Peptidase dimerisation domain 201 314 1.2E-17 T 13-10-2018 IPR011650 Peptidase M20, dimerisation domain COP00_05095 711d05c7f1548228efd1b7fcad6a6a1e 424 Gene3D G3DSA:3.30.70.360 204 330 6.5E-137 T 13-10-2018 COP00_05095 711d05c7f1548228efd1b7fcad6a6a1e 424 Pfam PF01546 Peptidase family M20/M25/M40 97 415 6.8E-40 T 13-10-2018 IPR002933 Peptidase M20 GO:0016787 COP00_05095 711d05c7f1548228efd1b7fcad6a6a1e 424 SUPERFAMILY SSF55031 203 311 1.18E-13 T 13-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain COP00_21065 fb8519cb80db344581bf86f12a63bb30 195 Gene3D G3DSA:3.40.50.360 1 191 5.1E-52 T 13-10-2018 IPR029039 Flavoprotein-like superfamily COP00_21065 fb8519cb80db344581bf86f12a63bb30 195 SUPERFAMILY SSF52218 1 188 2.48E-51 T 13-10-2018 IPR029039 Flavoprotein-like superfamily COP00_21065 fb8519cb80db344581bf86f12a63bb30 195 Pfam PF02525 Flavodoxin-like fold 1 183 3.4E-39 T 13-10-2018 IPR003680 Flavodoxin-like fold COP00_01515 a0970c48db819aa0c9aa49c3ddcb2a43 185 Pfam PF01765 Ribosome recycling factor 21 183 4.8E-68 T 13-10-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 COP00_01515 a0970c48db819aa0c9aa49c3ddcb2a43 185 Gene3D G3DSA:1.10.132.20 12 182 2.3E-72 T 13-10-2018 COP00_01515 a0970c48db819aa0c9aa49c3ddcb2a43 185 Gene3D G3DSA:3.30.1360.40 31 105 2.3E-72 T 13-10-2018 COP00_01515 a0970c48db819aa0c9aa49c3ddcb2a43 185 SUPERFAMILY SSF55194 3 184 3.27E-74 T 13-10-2018 IPR036191 RRF superfamily Reactome: R-HSA-5419276 COP00_01515 a0970c48db819aa0c9aa49c3ddcb2a43 185 TIGRFAM TIGR00496 frr: ribosome recycling factor 10 185 1.0E-81 T 13-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 COP00_01515 a0970c48db819aa0c9aa49c3ddcb2a43 185 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 185 29.532 T 13-10-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 COP00_08085 88756e4ed5058969e25b4f907ed321a1 158 Gene3D G3DSA:3.10.50.30 80 158 8.4E-29 T 13-10-2018 IPR036953 Transcription elongation factor GreA/GreB, C-terminal domain superfamily GO:0003677|GO:0032784 COP00_08085 88756e4ed5058969e25b4f907ed321a1 158 Gene3D G3DSA:1.10.287.180 5 78 3.7E-32 T 13-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 COP00_08085 88756e4ed5058969e25b4f907ed321a1 158 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 8 158 8.0E-60 T 13-10-2018 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 COP00_08085 88756e4ed5058969e25b4f907ed321a1 158 SUPERFAMILY SSF46557 7 79 1.7E-27 T 13-10-2018 IPR036805 Transcription elongation factor, GreA/GreB, N-terminal domain superfamily GO:0003677|GO:0032784 COP00_08085 88756e4ed5058969e25b4f907ed321a1 158 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 85 158 1.6E-28 T 13-10-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 COP00_08085 88756e4ed5058969e25b4f907ed321a1 158 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 123 139 - T 13-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 COP00_08085 88756e4ed5058969e25b4f907ed321a1 158 PIRSF PIRSF006092 1 158 1.0E-54 T 13-10-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 COP00_08085 88756e4ed5058969e25b4f907ed321a1 158 Hamap MF_00105 Transcription elongation factor GreA [greA]. 5 158 33.487 T 13-10-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 COP00_08085 88756e4ed5058969e25b4f907ed321a1 158 SUPERFAMILY SSF54534 84 157 4.45E-23 T 13-10-2018 COP00_08085 88756e4ed5058969e25b4f907ed321a1 158 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 20 51 - T 13-10-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 COP00_08085 88756e4ed5058969e25b4f907ed321a1 158 Pfam PF03449 Transcription elongation factor, N-terminal 8 77 1.9E-31 T 13-10-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 COP00_02985 0ae6a5e3d3db5a14a1d290bad37108c8 242 SUPERFAMILY SSF51998 168 242 4.26E-21 T 13-10-2018 COP00_02985 0ae6a5e3d3db5a14a1d290bad37108c8 242 Pfam PF08343 Ribonucleotide reductase N-terminal 10 90 1.1E-29 T 13-10-2018 IPR013554 Ribonucleotide reductase N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 COP00_02985 0ae6a5e3d3db5a14a1d290bad37108c8 242 Pfam PF02867 Ribonucleotide reductase, barrel domain 169 242 3.3E-20 T 13-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 COP00_02985 0ae6a5e3d3db5a14a1d290bad37108c8 242 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 92 164 6.8E-16 T 13-10-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 COP00_02985 0ae6a5e3d3db5a14a1d290bad37108c8 242 Gene3D G3DSA:3.20.70.20 13 242 3.3E-41 T 13-10-2018 COP00_02985 0ae6a5e3d3db5a14a1d290bad37108c8 242 SUPERFAMILY SSF48168 9 167 1.07E-49 T 13-10-2018 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 COP00_06130 a5f285a96d4447faa30177e041f18800 99 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 3 93 2.9E-24 T 13-10-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 COP00_06130 a5f285a96d4447faa30177e041f18800 99 Gene3D G3DSA:3.40.50.2300 1 99 3.5E-36 T 13-10-2018 COP00_06130 a5f285a96d4447faa30177e041f18800 99 SUPERFAMILY SSF52794 1 99 5.23E-36 T 13-10-2018 IPR036095 PTS system IIB component-like superfamily GO:0008982|GO:0009401 COP00_01250 1c725de70948dc6a230debf49ecdb52e 76 Pfam PF13083 KH domain 2 74 5.8E-23 T 13-10-2018 COP00_01250 1c725de70948dc6a230debf49ecdb52e 76 SUPERFAMILY SSF54814 19 58 4.58E-6 T 13-10-2018 IPR009019 K homology domain superfamily, prokaryotic type GO:0003723 COP00_01250 1c725de70948dc6a230debf49ecdb52e 76 Gene3D G3DSA:3.30.300.20 1 62 7.2E-6 T 13-10-2018 IPR015946 K homology domain-like, alpha/beta COP00_01250 1c725de70948dc6a230debf49ecdb52e 76 Hamap MF_00088 UPF0109 protein . 1 75 22.426 T 13-10-2018 IPR020627 Uncharacterised protein family UPF0109 COP00_15310 e44dc9a4d3b8af6c91518f576ad279ef 311 SUPERFAMILY SSF51430 1 310 2.49E-98 T 13-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily COP00_15310 e44dc9a4d3b8af6c91518f576ad279ef 311 PRINTS PR00069 Aldo-keto reductase signature 109 127 7.0E-13 T 13-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 COP00_15310 e44dc9a4d3b8af6c91518f576ad279ef 311 PRINTS PR00069 Aldo-keto reductase signature 140 157 7.0E-13 T 13-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 COP00_15310 e44dc9a4d3b8af6c91518f576ad279ef 311 PRINTS PR00069 Aldo-keto reductase signature 44 68 7.0E-13 T 13-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 COP00_15310 e44dc9a4d3b8af6c91518f576ad279ef 311 Gene3D G3DSA:3.20.20.100 1 311 4.8E-130 T 13-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily COP00_15310 e44dc9a4d3b8af6c91518f576ad279ef 311 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 140 157 - T 13-10-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 COP00_15310 e44dc9a4d3b8af6c91518f576ad279ef 311 Pfam PF00248 Aldo/keto reductase family 15 308 1.9E-78 T 13-10-2018 IPR023210 NADP-dependent oxidoreductase domain COP00_22240 bd0580ebaf9bc6af561adc67789c749e 346 Gene3D G3DSA:3.40.630.10 13 341 2.5E-125 T 13-10-2018 COP00_22240 bd0580ebaf9bc6af561adc67789c749e 346 SUPERFAMILY SSF53187 5 342 6.29E-57 T 13-10-2018 COP00_22240 bd0580ebaf9bc6af561adc67789c749e 346 Gene3D G3DSA:2.40.30.40 76 170 2.5E-125 T 13-10-2018 IPR023367 Peptidase M42, domain 2 COP00_22240 bd0580ebaf9bc6af561adc67789c749e 346 Pfam PF05343 M42 glutamyl aminopeptidase 48 336 2.2E-90 T 13-10-2018 IPR008007 Peptidase M42 COP00_22240 bd0580ebaf9bc6af561adc67789c749e 346 PIRSF PIRSF001123 4 344 2.5E-39 T 13-10-2018 IPR008007 Peptidase M42 COP00_22240 bd0580ebaf9bc6af561adc67789c749e 346 SUPERFAMILY SSF101821 73 185 2.29E-32 T 13-10-2018 COP00_05695 7b9a5ab873a12249c44b7632c38c8164 76 Gene3D G3DSA:2.60.40.50 1 76 1.8E-44 T 13-10-2018 IPR016031 Tryptophan RNA-binding attenuator protein-like domain superfamily COP00_05695 7b9a5ab873a12249c44b7632c38c8164 76 SUPERFAMILY SSF51219 7 74 2.62E-36 T 13-10-2018 IPR016031 Tryptophan RNA-binding attenuator protein-like domain superfamily COP00_05695 7b9a5ab873a12249c44b7632c38c8164 76 Pfam PF02081 Tryptophan RNA-binding attenuator protein 6 73 7.5E-40 T 13-10-2018 IPR023558 Tryptophan RNA-binding attenuator protein domain COP00_05695 7b9a5ab873a12249c44b7632c38c8164 76 Hamap MF_00798 Transcription attenuation protein MtrB [mtrB]. 1 73 29.036 T 13-10-2018 IPR000824 Transcription attenuation protein MtrB GO:0003723|GO:0006353|GO:0006355 COP00_05695 7b9a5ab873a12249c44b7632c38c8164 76 PRINTS PR00687 Tryptophan RNA-binding attenuator protein signature 58 74 5.2E-39 T 13-10-2018 IPR000824 Transcription attenuation protein MtrB GO:0003723|GO:0006353|GO:0006355 COP00_05695 7b9a5ab873a12249c44b7632c38c8164 76 PRINTS PR00687 Tryptophan RNA-binding attenuator protein signature 26 42 5.2E-39 T 13-10-2018 IPR000824 Transcription attenuation protein MtrB GO:0003723|GO:0006353|GO:0006355 COP00_05695 7b9a5ab873a12249c44b7632c38c8164 76 PRINTS PR00687 Tryptophan RNA-binding attenuator protein signature 42 58 5.2E-39 T 13-10-2018 IPR000824 Transcription attenuation protein MtrB GO:0003723|GO:0006353|GO:0006355 COP00_05695 7b9a5ab873a12249c44b7632c38c8164 76 PRINTS PR00687 Tryptophan RNA-binding attenuator protein signature 9 26 5.2E-39 T 13-10-2018 IPR000824 Transcription attenuation protein MtrB GO:0003723|GO:0006353|GO:0006355 COP00_04240 f7516b790e67a16bb91961ce04e99d06 186 SUPERFAMILY SSF52218 2 161 5.35E-39 T 13-10-2018 IPR029039 Flavoprotein-like superfamily COP00_04240 f7516b790e67a16bb91961ce04e99d06 186 Pfam PF02525 Flavodoxin-like fold 2 156 4.4E-36 T 13-10-2018 IPR003680 Flavodoxin-like fold COP00_04240 f7516b790e67a16bb91961ce04e99d06 186 Gene3D G3DSA:3.40.50.360 1 186 1.6E-51 T 13-10-2018 IPR029039 Flavoprotein-like superfamily COP00_20555 c32854628b20e10d36a1dcf2bcd2b161 378 TIGRFAM TIGR00858 bioF: 8-amino-7-oxononanoate synthase 21 365 9.8E-145 T 13-10-2018 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 COP00_20555 c32854628b20e10d36a1dcf2bcd2b161 378 Gene3D G3DSA:3.40.640.10 46 273 8.4E-134 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 COP00_20555 c32854628b20e10d36a1dcf2bcd2b161 378 Pfam PF00155 Aminotransferase class I and II 32 364 8.2E-64 T 13-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 COP00_20555 c32854628b20e10d36a1dcf2bcd2b161 378 SUPERFAMILY SSF53383 6 371 2.31E-102 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase COP00_20555 c32854628b20e10d36a1dcf2bcd2b161 378 Gene3D G3DSA:3.90.1150.10 32 364 8.4E-134 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 COP00_23730 eac4982a25a8b4e769933899b7bac10c 281 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 18 272 2.8E-94 T 13-10-2018 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 COP00_23730 eac4982a25a8b4e769933899b7bac10c 281 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 80 275 4.8E-17 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 COP00_23730 eac4982a25a8b4e769933899b7bac10c 281 Gene3D G3DSA:1.10.3720.10 16 278 1.3E-63 T 13-10-2018 IPR035906 MetI-like superfamily COP00_23730 eac4982a25a8b4e769933899b7bac10c 281 SUPERFAMILY SSF161098 16 270 2.35E-54 T 13-10-2018 IPR035906 MetI-like superfamily COP00_23730 eac4982a25a8b4e769933899b7bac10c 281 TIGRFAM TIGR02140 permease_CysW: sulfate ABC transporter, permease protein CysW 17 275 4.9E-122 T 13-10-2018 IPR011866 Sulphate ABC transporter, permease protein CysW GO:0008272|GO:0015116|GO:0016021 COP00_19415 d6b0d5b93f99682df07f47c5161fd294 473 Pfam PF00083 Sugar (and other) transporter 15 455 3.9E-117 T 13-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 COP00_19415 d6b0d5b93f99682df07f47c5161fd294 473 TIGRFAM TIGR00879 SP: MFS transporter, sugar porter (SP) family 6 450 1.3E-115 T 13-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 COP00_19415 d6b0d5b93f99682df07f47c5161fd294 473 ProSitePatterns PS00217 Sugar transport proteins signature 2. 112 137 - T 13-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 COP00_19415 d6b0d5b93f99682df07f47c5161fd294 473 SUPERFAMILY SSF103473 8 452 2.22E-80 T 13-10-2018 IPR036259 MFS transporter superfamily COP00_19415 d6b0d5b93f99682df07f47c5161fd294 473 Gene3D G3DSA:1.20.1250.20 6 458 2.3E-130 T 13-10-2018 COP00_19415 d6b0d5b93f99682df07f47c5161fd294 473 PRINTS PR00171 Sugar transporter signature 107 126 8.8E-24 T 13-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 COP00_19415 d6b0d5b93f99682df07f47c5161fd294 473 PRINTS PR00171 Sugar transporter signature 356 377 8.8E-24 T 13-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 COP00_19415 d6b0d5b93f99682df07f47c5161fd294 473 PRINTS PR00171 Sugar transporter signature 267 277 8.8E-24 T 13-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 COP00_19415 d6b0d5b93f99682df07f47c5161fd294 473 PRINTS PR00171 Sugar transporter signature 379 391 8.8E-24 T 13-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 COP00_19415 d6b0d5b93f99682df07f47c5161fd294 473 PRINTS PR00171 Sugar transporter signature 22 32 8.8E-24 T 13-10-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022857|GO:0055085 Reactome: R-HSA-189200 COP00_19415 d6b0d5b93f99682df07f47c5161fd294 473 ProSitePatterns PS00216 Sugar transport proteins signature 1. 70 87 - T 13-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 COP00_02170 05a96ee5960190c3db553f729ee554d4 182 SMART SM00860 44 160 4.4E-9 T 13-10-2018 IPR018958 Knr4/Smi1-like domain COP00_02170 05a96ee5960190c3db553f729ee554d4 182 Pfam PF09346 SMI1 / KNR4 family (SUKH-1) 44 98 1.5E-9 T 13-10-2018 IPR018958 Knr4/Smi1-like domain COP00_02170 05a96ee5960190c3db553f729ee554d4 182 SUPERFAMILY SSF160631 40 173 4.32E-16 T 13-10-2018 COP00_02170 05a96ee5960190c3db553f729ee554d4 182 Gene3D G3DSA:3.40.1580.10 33 171 8.7E-12 T 13-10-2018 IPR037883 Knr4/Smi1-like domain superfamily COP00_24445 cdcac424fef06a121152d5ea3bd7edd2 476 SUPERFAMILY SSF53474 13 264 3.27E-15 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold COP00_24445 cdcac424fef06a121152d5ea3bd7edd2 476 Gene3D G3DSA:3.40.50.1820 10 305 1.8E-7 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold COP00_24445 cdcac424fef06a121152d5ea3bd7edd2 476 Pfam PF01764 Lipase (class 3) 129 213 1.1E-4 T 13-10-2018 IPR002921 Fungal lipase-like domain GO:0006629 Reactome: R-HSA-426048 COP00_11055 74ad29fccb41510ea068e0e08753eb02 83 ProDom PD065427 YUSU IG COIL COILED BH3491 1 78 2.0E-25 T 13-10-2018 IPR020393 Uncharacterised protein family YusU COP00_11055 74ad29fccb41510ea068e0e08753eb02 83 Pfam PF10835 Protein of unknown function (DUF2573) 3 80 3.9E-42 T 13-10-2018 IPR020393 Uncharacterised protein family YusU COP00_12645 98b3227b8c4532bc34a58501030f0ae1 155 Pfam PF06114 IrrE N-terminal-like domain 10 119 4.3E-8 T 13-10-2018 IPR010359 IrrE N-terminal-like domain COP00_15945 b797d79bff142aa26a14ab18e9d2b22e 71 SUPERFAMILY SSF55174 2 67 1.0E-19 T 13-10-2018 COP00_15945 b797d79bff142aa26a14ab18e9d2b22e 71 Gene3D G3DSA:3.10.290.10 1 70 1.5E-24 T 13-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 COP00_15945 b797d79bff142aa26a14ab18e9d2b22e 71 TIGRFAM TIGR02988 YaaA_near_RecF: S4 domain protein YaaA 4 63 6.3E-31 T 13-10-2018 IPR014330 RNA-binding S4-related,YaaA COP00_15945 b797d79bff142aa26a14ab18e9d2b22e 71 Pfam PF13275 S4 domain 5 69 3.4E-28 T 13-10-2018 COP00_22935 592195492b228eb0cc12e34b3b27e412 211 SMART SM00954 45 165 1.0E-40 T 13-10-2018 IPR007685 RelA/SpoT GO:0015969 COP00_22935 592195492b228eb0cc12e34b3b27e412 211 Pfam PF04607 Region found in RelA / SpoT proteins 45 163 6.8E-36 T 13-10-2018 IPR007685 RelA/SpoT GO:0015969 COP00_22935 592195492b228eb0cc12e34b3b27e412 211 Gene3D G3DSA:1.10.287.860 148 210 3.2E-29 T 13-10-2018 COP00_22935 592195492b228eb0cc12e34b3b27e412 211 Gene3D G3DSA:3.30.460.10 1 147 1.3E-55 T 13-10-2018 COP00_22935 592195492b228eb0cc12e34b3b27e412 211 SUPERFAMILY SSF81301 3 198 8.17E-59 T 13-10-2018 COP00_04020 aac444ba297cfe3f35d6076c6585f3c0 187 Pfam PF02669 K+-transporting ATPase, c chain 6 183 1.0E-64 T 13-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 COP00_04020 aac444ba297cfe3f35d6076c6585f3c0 187 Hamap MF_00276 Potassium-transporting ATPase KdpC subunit [kdpC]. 1 185 31.316 T 13-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 COP00_04020 aac444ba297cfe3f35d6076c6585f3c0 187 TIGRFAM TIGR00681 kdpC: K+-transporting ATPase, C subunit 8 181 6.4E-49 T 13-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 COP00_04020 aac444ba297cfe3f35d6076c6585f3c0 187 PIRSF PIRSF001296 1 187 7.2E-66 T 13-10-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 COP00_22910 2772dfb391970de9b6f6e4c233bf445e 297 SUPERFAMILY SSF52833 19 223 2.91E-31 T 13-10-2018 IPR036249 Thioredoxin-like superfamily COP00_22910 2772dfb391970de9b6f6e4c233bf445e 297 Pfam PF13743 Thioredoxin 24 214 1.4E-73 T 13-10-2018 COP00_22910 2772dfb391970de9b6f6e4c233bf445e 297 Gene3D G3DSA:3.40.30.10 20 216 4.3E-31 T 13-10-2018 COP00_14685 f1437e8b70430b040654e024a2910fc1 177 SUPERFAMILY SSF88659 116 175 8.6E-14 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like COP00_14685 f1437e8b70430b040654e024a2910fc1 177 Gene3D G3DSA:1.10.10.10 118 176 2.1E-16 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_14685 f1437e8b70430b040654e024a2910fc1 177 Pfam PF08281 Sigma-70, region 4 121 171 3.3E-13 T 13-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 COP00_14685 f1437e8b70430b040654e024a2910fc1 177 SUPERFAMILY SSF88946 2 97 1.94E-27 T 13-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 COP00_14685 f1437e8b70430b040654e024a2910fc1 177 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 46 77 - T 13-10-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 COP00_14685 f1437e8b70430b040654e024a2910fc1 177 Pfam PF04542 Sigma-70 region 2 24 91 4.4E-16 T 13-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 COP00_14685 f1437e8b70430b040654e024a2910fc1 177 Gene3D G3DSA:1.10.1740.10 1 117 5.2E-26 T 13-10-2018 COP00_14685 f1437e8b70430b040654e024a2910fc1 177 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 20 174 4.8E-28 T 13-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 COP00_15620 68093ec6d1cda3ad5fc23897c9d55477 380 SUPERFAMILY SSF55874 252 369 5.76E-13 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily COP00_15620 68093ec6d1cda3ad5fc23897c9d55477 380 Gene3D G3DSA:3.30.565.10 248 369 6.0E-30 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily COP00_15620 68093ec6d1cda3ad5fc23897c9d55477 380 Pfam PF07730 Histidine kinase 183 248 1.0E-16 T 13-10-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 COP00_15620 68093ec6d1cda3ad5fc23897c9d55477 380 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 289 332 5.0E-6 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase COP00_17495 00e9a17cba21a419fb0e5a9f12b5f6e3 479 SUPERFAMILY SSF53383 19 472 6.19E-117 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase COP00_17495 00e9a17cba21a419fb0e5a9f12b5f6e3 479 Pfam PF00282 Pyridoxal-dependent decarboxylase conserved domain 63 407 3.6E-78 T 13-10-2018 IPR002129 Pyridoxal phosphate-dependent decarboxylase GO:0016831|GO:0019752|GO:0030170 COP00_17495 00e9a17cba21a419fb0e5a9f12b5f6e3 479 Gene3D G3DSA:3.90.1150.170 33 466 2.5E-156 T 13-10-2018 COP00_17495 00e9a17cba21a419fb0e5a9f12b5f6e3 479 Gene3D G3DSA:3.40.640.10 110 352 2.5E-156 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 COP00_21705 78e5842cc896e47bcad8b61aaed026f0 66 Pfam PF01381 Helix-turn-helix 6 59 5.5E-17 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 COP00_21705 78e5842cc896e47bcad8b61aaed026f0 66 SMART SM00530 4 59 1.3E-16 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 COP00_21705 78e5842cc896e47bcad8b61aaed026f0 66 SUPERFAMILY SSF47413 3 63 7.24E-19 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 COP00_21705 78e5842cc896e47bcad8b61aaed026f0 66 Gene3D G3DSA:1.10.260.40 1 64 3.3E-26 T 13-10-2018 COP00_12195 630c43fbc6be456efc284a7b2d58f72d 427 Gene3D G3DSA:1.20.1250.20 7 202 1.4E-53 T 13-10-2018 COP00_12195 630c43fbc6be456efc284a7b2d58f72d 427 Pfam PF07690 Major Facilitator Superfamily 21 384 6.9E-68 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 COP00_12195 630c43fbc6be456efc284a7b2d58f72d 427 Gene3D G3DSA:1.20.1250.20 222 425 5.8E-35 T 13-10-2018 COP00_12195 630c43fbc6be456efc284a7b2d58f72d 427 SUPERFAMILY SSF103473 6 423 2.88E-92 T 13-10-2018 IPR036259 MFS transporter superfamily COP00_12195 630c43fbc6be456efc284a7b2d58f72d 427 PIRSF PIRSF002808 3 424 1.6E-41 T 13-10-2018 IPR000849 Sugar phosphate transporter GO:0016021|GO:0022857|GO:0055085 COP00_01305 dfb9bedf5145f6f68d2216f9ef7eb82b 300 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 72 288 3.6E-82 T 13-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 COP00_01305 dfb9bedf5145f6f68d2216f9ef7eb82b 300 SUPERFAMILY SSF102405 83 289 1.83E-39 T 13-10-2018 COP00_01305 dfb9bedf5145f6f68d2216f9ef7eb82b 300 Gene3D G3DSA:3.40.50.450 27 295 5.6E-94 T 13-10-2018 COP00_01305 dfb9bedf5145f6f68d2216f9ef7eb82b 300 Pfam PF02481 DNA recombination-mediator protein A 74 280 7.7E-79 T 13-10-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 COP00_16790 9aaea3a2c5d3a56bee82d4588ee0fcb8 248 SUPERFAMILY SSF55920 1 247 1.44E-91 T 13-10-2018 IPR036005 Creatinase/aminopeptidase-like COP00_16790 9aaea3a2c5d3a56bee82d4588ee0fcb8 248 PRINTS PR00599 Methionine aminopeptidase-1 signature 159 171 2.0E-24 T 13-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 COP00_16790 9aaea3a2c5d3a56bee82d4588ee0fcb8 248 PRINTS PR00599 Methionine aminopeptidase-1 signature 190 202 2.0E-24 T 13-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 COP00_16790 9aaea3a2c5d3a56bee82d4588ee0fcb8 248 PRINTS PR00599 Methionine aminopeptidase-1 signature 67 80 2.0E-24 T 13-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 COP00_16790 9aaea3a2c5d3a56bee82d4588ee0fcb8 248 PRINTS PR00599 Methionine aminopeptidase-1 signature 89 105 2.0E-24 T 13-10-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 COP00_16790 9aaea3a2c5d3a56bee82d4588ee0fcb8 248 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 165 183 - T 13-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 COP00_16790 9aaea3a2c5d3a56bee82d4588ee0fcb8 248 Gene3D G3DSA:3.90.230.10 1 248 4.2E-109 T 13-10-2018 COP00_16790 9aaea3a2c5d3a56bee82d4588ee0fcb8 248 Pfam PF00557 Metallopeptidase family M24 12 239 1.1E-56 T 13-10-2018 IPR000994 Peptidase M24 COP00_16790 9aaea3a2c5d3a56bee82d4588ee0fcb8 248 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 2 247 2.5E-104 T 13-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 COP00_16790 9aaea3a2c5d3a56bee82d4588ee0fcb8 248 Hamap MF_01974 Methionine aminopeptidase [map]. 2 248 43.473 T 13-10-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 COP00_13055 9db6ea267ade4b7523fa8ddf0a81b351 133 Gene3D G3DSA:1.20.120.340 1 122 6.6E-40 T 13-10-2018 COP00_13055 9db6ea267ade4b7523fa8ddf0a81b351 133 TIGRFAM TIGR00208 fliS: flagellar protein FliS 1 120 5.6E-48 T 13-10-2018 IPR003713 Flagellar protein FliS GO:0044780 COP00_13055 9db6ea267ade4b7523fa8ddf0a81b351 133 SUPERFAMILY SSF101116 4 123 6.15E-39 T 13-10-2018 IPR036584 Flagellar protein FliS superfamily GO:0044780 COP00_13055 9db6ea267ade4b7523fa8ddf0a81b351 133 Pfam PF02561 Flagellar protein FliS 7 118 5.3E-39 T 13-10-2018 IPR003713 Flagellar protein FliS GO:0044780 COP00_13055 9db6ea267ade4b7523fa8ddf0a81b351 133 PIRSF PIRSF039090 1 127 3.5E-35 T 13-10-2018 IPR003713 Flagellar protein FliS GO:0044780 COP00_05620 d3879b870f8d3c81f3318d0673bd2424 361 Gene3D G3DSA:3.90.1150.10 20 349 3.6E-116 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 COP00_05620 d3879b870f8d3c81f3318d0673bd2424 361 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 2 360 63.099 T 13-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 COP00_05620 d3879b870f8d3c81f3318d0673bd2424 361 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 5 357 8.9E-118 T 13-10-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 COP00_05620 d3879b870f8d3c81f3318d0673bd2424 361 SUPERFAMILY SSF53383 4 360 1.33E-84 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase COP00_05620 d3879b870f8d3c81f3318d0673bd2424 361 Gene3D G3DSA:3.40.640.10 43 268 3.6E-116 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 COP00_05620 d3879b870f8d3c81f3318d0673bd2424 361 Pfam PF00155 Aminotransferase class I and II 30 354 1.9E-62 T 13-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 COP00_05620 d3879b870f8d3c81f3318d0673bd2424 361 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 220 229 - T 13-10-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0016740 COP00_09895 ae64026c86a22ffcdab15a6127b828b1 272 Pfam PF00378 Enoyl-CoA hydratase/isomerase 17 267 2.1E-91 T 13-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 COP00_09895 ae64026c86a22ffcdab15a6127b828b1 272 SUPERFAMILY SSF52096 6 267 5.12E-79 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily COP00_09895 ae64026c86a22ffcdab15a6127b828b1 272 Gene3D G3DSA:3.90.226.10 1 209 7.2E-78 T 13-10-2018 COP00_09895 ae64026c86a22ffcdab15a6127b828b1 272 Hamap MF_01934 1,4-dihydroxy-2-naphthoyl-CoA synthase [menB]. 5 271 56.678 T 13-10-2018 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837 COP00_09895 ae64026c86a22ffcdab15a6127b828b1 272 TIGRFAM TIGR01929 menB: naphthoate synthase 11 268 1.5E-133 T 13-10-2018 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837 COP00_09895 ae64026c86a22ffcdab15a6127b828b1 272 Gene3D G3DSA:1.10.12.10 210 260 6.5E-29 T 13-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal COP00_09895 ae64026c86a22ffcdab15a6127b828b1 272 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 110 130 - T 13-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 COP00_13665 4ee3bdd0d1314a9ac06db760d7e0f43c 478 Gene3D G3DSA:1.20.1250.20 253 454 1.0E-15 T 13-10-2018 COP00_13665 4ee3bdd0d1314a9ac06db760d7e0f43c 478 Pfam PF07690 Major Facilitator Superfamily 17 405 9.4E-49 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 COP00_13665 4ee3bdd0d1314a9ac06db760d7e0f43c 478 SUPERFAMILY SSF103473 6 451 4.19E-65 T 13-10-2018 IPR036259 MFS transporter superfamily COP00_13665 4ee3bdd0d1314a9ac06db760d7e0f43c 478 Gene3D G3DSA:1.20.1720.10 11 223 4.3E-49 T 13-10-2018 COP00_13665 4ee3bdd0d1314a9ac06db760d7e0f43c 478 PRINTS PR01036 Tetracycline resistance protein TetB signature 13 37 9.0E-6 T 13-10-2018 COP00_13665 4ee3bdd0d1314a9ac06db760d7e0f43c 478 PRINTS PR01036 Tetracycline resistance protein TetB signature 104 124 9.0E-6 T 13-10-2018 COP00_13665 4ee3bdd0d1314a9ac06db760d7e0f43c 478 PRINTS PR01036 Tetracycline resistance protein TetB signature 396 415 9.0E-6 T 13-10-2018 COP00_13665 4ee3bdd0d1314a9ac06db760d7e0f43c 478 PRINTS PR01036 Tetracycline resistance protein TetB signature 134 158 9.0E-6 T 13-10-2018 COP00_13665 4ee3bdd0d1314a9ac06db760d7e0f43c 478 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 10 414 2.7E-86 T 13-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 COP00_18220 f1a5435714a936e030c67ac0c42b491a 478 SUPERFAMILY SSF51445 8 477 8.64E-175 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily COP00_18220 f1a5435714a936e030c67ac0c42b491a 478 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 13 27 - T 13-10-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site COP00_18220 f1a5435714a936e030c67ac0c42b491a 478 Gene3D G3DSA:3.20.20.80 2 478 1.0E-184 T 13-10-2018 COP00_18220 f1a5435714a936e030c67ac0c42b491a 478 Pfam PF00232 Glycosyl hydrolase family 1 7 475 4.2E-188 T 13-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 COP00_18220 f1a5435714a936e030c67ac0c42b491a 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 292 306 9.0E-18 T 13-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 COP00_18220 f1a5435714a936e030c67ac0c42b491a 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 440 452 9.0E-18 T 13-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 COP00_18220 f1a5435714a936e030c67ac0c42b491a 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 416 433 9.0E-18 T 13-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 COP00_18220 f1a5435714a936e030c67ac0c42b491a 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 395 406 9.0E-18 T 13-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 COP00_18220 f1a5435714a936e030c67ac0c42b491a 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 374 382 9.0E-18 T 13-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 COP00_18220 f1a5435714a936e030c67ac0c42b491a 478 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 374 382 - T 13-10-2018 IPR018120 Glycoside hydrolase family 1, active site COP00_05665 a57674331e9b13f156def5e0f3e2728b 390 ProSitePatterns PS00788 Chorismate synthase signature 2. 131 147 - T 13-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 COP00_05665 a57674331e9b13f156def5e0f3e2728b 390 SUPERFAMILY SSF103263 1 388 3.53E-151 T 13-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 COP00_05665 a57674331e9b13f156def5e0f3e2728b 390 Hamap MF_00300 Chorismate synthase [aroC]. 1 372 36.899 T 13-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 COP00_05665 a57674331e9b13f156def5e0f3e2728b 390 Pfam PF01264 Chorismate synthase 1 364 4.6E-126 T 13-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 COP00_05665 a57674331e9b13f156def5e0f3e2728b 390 Gene3D G3DSA:3.60.150.10 1 389 4.6E-157 T 13-10-2018 IPR035904 Chorismate synthase AroC superfamily KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 COP00_05665 a57674331e9b13f156def5e0f3e2728b 390 ProSitePatterns PS00789 Chorismate synthase signature 3. 339 355 - T 13-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 COP00_05665 a57674331e9b13f156def5e0f3e2728b 390 PIRSF PIRSF001456 1 385 1.4E-133 T 13-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 COP00_05665 a57674331e9b13f156def5e0f3e2728b 390 TIGRFAM TIGR00033 aroC: chorismate synthase 1 369 5.2E-131 T 13-10-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 COP00_05665 a57674331e9b13f156def5e0f3e2728b 390 ProSitePatterns PS00787 Chorismate synthase signature 1. 7 22 - T 13-10-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 COP00_11355 84e2e2d0e35f0c465719eccb81577b64 776 Pfam PF00580 UvrD/REP helicase N-terminal domain 328 578 4.0E-8 T 13-10-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 COP00_11355 84e2e2d0e35f0c465719eccb81577b64 776 Pfam PF13538 UvrD-like helicase C-terminal domain 705 753 2.1E-9 T 13-10-2018 IPR027785 UvrD-like helicase C-terminal domain COP00_11355 84e2e2d0e35f0c465719eccb81577b64 776 SUPERFAMILY SSF52540 204 764 7.71E-52 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_11355 84e2e2d0e35f0c465719eccb81577b64 776 Gene3D G3DSA:3.40.50.300 605 775 2.5E-54 T 13-10-2018 COP00_13175 543b9695f0aba35a430565dc1da65171 485 Pfam PF04932 O-Antigen ligase 261 406 1.4E-14 T 13-10-2018 IPR007016 O-antigen ligase-related COP00_10370 7f0e8b4b3ef10a77bdeec7f0b1da40b2 205 SUPERFAMILY SSF53098 4 178 9.83E-29 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily COP00_10370 7f0e8b4b3ef10a77bdeec7f0b1da40b2 205 Pfam PF00929 Exonuclease 7 173 2.0E-25 T 13-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III COP00_10370 7f0e8b4b3ef10a77bdeec7f0b1da40b2 205 Gene3D G3DSA:3.30.420.10 1 200 2.6E-40 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 COP00_10370 7f0e8b4b3ef10a77bdeec7f0b1da40b2 205 SMART SM00479 5 182 1.6E-34 T 13-10-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III COP00_15455 6183676e3d6026b65ec4de7ff1c09e2c 331 SUPERFAMILY SSF51735 1 327 3.28E-100 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily COP00_15455 6183676e3d6026b65ec4de7ff1c09e2c 331 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 3 326 1.2E-133 T 13-10-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-5609977|Reactome: R-HSA-70370 COP00_15455 6183676e3d6026b65ec4de7ff1c09e2c 331 Gene3D G3DSA:3.90.25.10 185 320 6.2E-127 T 13-10-2018 COP00_15455 6183676e3d6026b65ec4de7ff1c09e2c 331 Gene3D G3DSA:3.40.50.720 3 264 6.2E-127 T 13-10-2018 COP00_15455 6183676e3d6026b65ec4de7ff1c09e2c 331 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 252 1.1E-60 T 13-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 COP00_05845 8b1917f9ecca6e50a8018c886f35210a 82 Pfam PF13370 4Fe-4S single cluster domain of Ferredoxin I 7 69 1.7E-21 T 13-10-2018 COP00_05845 8b1917f9ecca6e50a8018c886f35210a 82 Gene3D G3DSA:3.30.70.20 2 82 3.0E-36 T 13-10-2018 COP00_05845 8b1917f9ecca6e50a8018c886f35210a 82 PRINTS PR00352 3Fe-4S ferredoxin signature 7 18 2.9E-8 T 13-10-2018 IPR001080 3Fe-4S ferredoxin GO:0005506|GO:0009055 COP00_05845 8b1917f9ecca6e50a8018c886f35210a 82 PRINTS PR00352 3Fe-4S ferredoxin signature 55 67 2.9E-8 T 13-10-2018 IPR001080 3Fe-4S ferredoxin GO:0005506|GO:0009055 COP00_05845 8b1917f9ecca6e50a8018c886f35210a 82 PRINTS PR00352 3Fe-4S ferredoxin signature 18 28 2.9E-8 T 13-10-2018 IPR001080 3Fe-4S ferredoxin GO:0005506|GO:0009055 COP00_05845 8b1917f9ecca6e50a8018c886f35210a 82 SUPERFAMILY SSF54862 3 73 1.4E-13 T 13-10-2018 COP00_11565 ff5f6ef0173b94bebe3d453b8fb477cc 130 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 3 122 4.0E-31 T 13-10-2018 COP00_11565 ff5f6ef0173b94bebe3d453b8fb477cc 130 Pfam PF14184 Regulatory protein YrvL 5 122 1.5E-17 T 13-10-2018 IPR025912 Regulatory protein YrvL COP00_03775 1fc05099376f005e12696cd6b3cd186b 414 Pfam PF04282 Family of unknown function (DUF438) 22 88 2.8E-26 T 13-10-2018 IPR007380 Domain of unknown function DUF438 COP00_03775 1fc05099376f005e12696cd6b3cd186b 414 Gene3D G3DSA:1.20.120.520 94 307 9.9E-63 T 13-10-2018 COP00_03775 1fc05099376f005e12696cd6b3cd186b 414 Pfam PF01814 Hemerythrin HHE cation binding domain 101 232 7.2E-17 T 13-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 COP00_03775 1fc05099376f005e12696cd6b3cd186b 414 SUPERFAMILY SSF55785 291 390 3.95E-9 T 13-10-2018 IPR035965 PAS domain superfamily COP00_03775 1fc05099376f005e12696cd6b3cd186b 414 Pfam PF13596 PAS domain 293 397 3.9E-27 T 13-10-2018 COP00_20330 7b1b28fcb915409e7747af8f8054ff2c 348 SUPERFAMILY SSF50129 1 179 1.4E-57 T 13-10-2018 IPR011032 GroES-like superfamily COP00_20330 7b1b28fcb915409e7747af8f8054ff2c 348 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 25 142 1.0E-35 T 13-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 COP00_20330 7b1b28fcb915409e7747af8f8054ff2c 348 SUPERFAMILY SSF51735 145 311 3.31E-37 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily COP00_20330 7b1b28fcb915409e7747af8f8054ff2c 348 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 68 82 - T 13-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 COP00_20330 7b1b28fcb915409e7747af8f8054ff2c 348 SMART SM00829 8 345 0.0048 T 13-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 COP00_20330 7b1b28fcb915409e7747af8f8054ff2c 348 Gene3D G3DSA:3.40.50.720 159 293 1.4E-108 T 13-10-2018 COP00_20330 7b1b28fcb915409e7747af8f8054ff2c 348 Pfam PF00107 Zinc-binding dehydrogenase 182 307 3.0E-25 T 13-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 COP00_20330 7b1b28fcb915409e7747af8f8054ff2c 348 Gene3D G3DSA:3.90.180.10 8 331 1.4E-108 T 13-10-2018 COP00_08870 196f928429b3c641d311890e7a9295cb 71 Hamap MF_00669 Small, acid-soluble spore protein I [sspI]. 1 68 21.988 T 13-10-2018 IPR017525 Small, acid-soluble spore protein I GO:0030436 COP00_08870 196f928429b3c641d311890e7a9295cb 71 TIGRFAM TIGR03092 SASP_sspI: small, acid-soluble spore protein I 4 68 3.9E-34 T 13-10-2018 IPR017525 Small, acid-soluble spore protein I GO:0030436 COP00_08870 196f928429b3c641d311890e7a9295cb 71 Pfam PF14098 Small, acid-soluble spore protein I 3 67 6.1E-31 T 13-10-2018 IPR017525 Small, acid-soluble spore protein I GO:0030436 COP00_20650 2a8ccc0ad73963887883f1533cb7026d 344 Pfam PF00704 Glycosyl hydrolases family 18 75 329 1.8E-31 T 13-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 COP00_20650 2a8ccc0ad73963887883f1533cb7026d 344 Gene3D G3DSA:3.10.50.10 246 302 1.8E-80 T 13-10-2018 IPR029070 Chitinase insertion domain superfamily COP00_20650 2a8ccc0ad73963887883f1533cb7026d 344 SUPERFAMILY SSF51445 31 337 1.43E-42 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily COP00_20650 2a8ccc0ad73963887883f1533cb7026d 344 SMART SM00636 29 331 3.1E-31 T 13-10-2018 IPR011583 Chitinase II GO:0008061 COP00_20650 2a8ccc0ad73963887883f1533cb7026d 344 Gene3D G3DSA:3.20.20.80 51 336 1.8E-80 T 13-10-2018 COP00_11110 f25a625122957f69d5d0c09a8fd652ff 456 Pfam PF13365 Trypsin-like peptidase domain 170 314 9.3E-32 T 13-10-2018 COP00_11110 f25a625122957f69d5d0c09a8fd652ff 456 Gene3D G3DSA:2.30.42.10 352 456 3.9E-28 T 13-10-2018 COP00_11110 f25a625122957f69d5d0c09a8fd652ff 456 SUPERFAMILY SSF50494 136 349 2.53E-56 T 13-10-2018 IPR009003 Peptidase S1, PA clan COP00_11110 f25a625122957f69d5d0c09a8fd652ff 456 PRINTS PR00834 HtrA/DegQ protease family signature 244 268 1.1E-40 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 COP00_11110 f25a625122957f69d5d0c09a8fd652ff 456 PRINTS PR00834 HtrA/DegQ protease family signature 307 324 1.1E-40 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 COP00_11110 f25a625122957f69d5d0c09a8fd652ff 456 PRINTS PR00834 HtrA/DegQ protease family signature 182 194 1.1E-40 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 COP00_11110 f25a625122957f69d5d0c09a8fd652ff 456 PRINTS PR00834 HtrA/DegQ protease family signature 285 302 1.1E-40 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 COP00_11110 f25a625122957f69d5d0c09a8fd652ff 456 PRINTS PR00834 HtrA/DegQ protease family signature 399 411 1.1E-40 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 COP00_11110 f25a625122957f69d5d0c09a8fd652ff 456 PRINTS PR00834 HtrA/DegQ protease family signature 203 223 1.1E-40 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 COP00_11110 f25a625122957f69d5d0c09a8fd652ff 456 Gene3D G3DSA:2.40.10.10 235 351 2.9E-41 T 13-10-2018 COP00_11110 f25a625122957f69d5d0c09a8fd652ff 456 SMART SM00228 352 442 1.3E-15 T 13-10-2018 IPR001478 PDZ domain GO:0005515 COP00_11110 f25a625122957f69d5d0c09a8fd652ff 456 Gene3D G3DSA:2.40.10.10 120 232 3.7E-24 T 13-10-2018 COP00_11110 f25a625122957f69d5d0c09a8fd652ff 456 SUPERFAMILY SSF50156 336 450 3.55E-22 T 13-10-2018 IPR036034 PDZ superfamily GO:0005515 COP00_11110 f25a625122957f69d5d0c09a8fd652ff 456 Pfam PF13180 PDZ domain 352 451 1.6E-20 T 13-10-2018 IPR001478 PDZ domain GO:0005515 COP00_22810 ea19a97471fffb4d36099fd82351a454 340 Pfam PF00005 ABC transporter 48 199 7.5E-35 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 COP00_22810 ea19a97471fffb4d36099fd82351a454 340 ProSitePatterns PS00211 ABC transporters family signature. 172 186 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 COP00_22810 ea19a97471fffb4d36099fd82351a454 340 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 251 318 7.7E-18 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 COP00_22810 ea19a97471fffb4d36099fd82351a454 340 SMART SM00382 56 249 8.6E-15 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_22810 ea19a97471fffb4d36099fd82351a454 340 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 250 338 5.5E-28 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 COP00_22810 ea19a97471fffb4d36099fd82351a454 340 SUPERFAMILY SSF52540 20 271 3.7E-75 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_22810 ea19a97471fffb4d36099fd82351a454 340 Gene3D G3DSA:3.40.50.300 18 340 1.0E-104 T 13-10-2018 COP00_19910 dc6aafbbaaf27fbbc10443b0ac0911bc 227 Gene3D G3DSA:3.90.1680.10 6 227 1.1E-73 T 13-10-2018 IPR036590 SOS response associated peptidase-like COP00_19910 dc6aafbbaaf27fbbc10443b0ac0911bc 227 Pfam PF02586 SOS response associated peptidase (SRAP) 1 212 5.0E-73 T 13-10-2018 IPR003738 SOS response associated peptidase (SRAP) COP00_19910 dc6aafbbaaf27fbbc10443b0ac0911bc 227 SUPERFAMILY SSF143081 2 217 4.06E-74 T 13-10-2018 IPR036590 SOS response associated peptidase-like COP00_18025 9528ce40171201a42a1e8c838de67b39 271 PIRSF PIRSF030802 1 237 7.9E-15 T 13-10-2018 IPR024197 Uncharacterised conserved protein UCP030802 COP00_18025 9528ce40171201a42a1e8c838de67b39 271 Pfam PF05116 Sucrose-6F-phosphate phosphohydrolase 51 228 2.2E-7 T 13-10-2018 IPR006380 Sucrose-phosphatase-like, N-terminal COP00_18025 9528ce40171201a42a1e8c838de67b39 271 Gene3D G3DSA:3.40.50.1000 1 141 3.4E-18 T 13-10-2018 IPR023214 HAD superfamily COP00_18025 9528ce40171201a42a1e8c838de67b39 271 SUPERFAMILY SSF56784 1 241 2.86E-19 T 13-10-2018 IPR036412 HAD-like superfamily COP00_18025 9528ce40171201a42a1e8c838de67b39 271 Gene3D G3DSA:3.40.50.1000 142 268 2.4E-7 T 13-10-2018 IPR023214 HAD superfamily COP00_00525 27aec5cdac7f9edeac4038a65cdae2e2 69 Gene3D G3DSA:3.10.20.730 1 58 1.5E-26 T 13-10-2018 COP00_00525 27aec5cdac7f9edeac4038a65cdae2e2 69 Hamap MF_01553 UPF0356 protein . 1 69 22.191 T 13-10-2018 IPR009907 Protein of unknown function DUF1447 COP00_00525 27aec5cdac7f9edeac4038a65cdae2e2 69 ProDom PD055417 UPF0356 TRANSCRIPTIONAL REGULATOR SP0122 SH1862 BLI01669/BL01628 MW0973 LMOF2365_1049 BCE33L3734 SPYM3_1619/SPS0248 1 68 8.0E-29 T 13-10-2018 IPR009907 Protein of unknown function DUF1447 COP00_00525 27aec5cdac7f9edeac4038a65cdae2e2 69 Pfam PF07288 Protein of unknown function (DUF1447) 2 68 3.3E-28 T 13-10-2018 IPR009907 Protein of unknown function DUF1447 COP00_06230 396d5c6c0ed6fdd804d3c81042e54665 322 SUPERFAMILY SSF55729 2 136 9.12E-22 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase COP00_06230 396d5c6c0ed6fdd804d3c81042e54665 322 SUPERFAMILY SSF81301 153 315 2.06E-54 T 13-10-2018 COP00_06230 396d5c6c0ed6fdd804d3c81042e54665 322 Gene3D G3DSA:3.30.460.10 148 316 1.2E-59 T 13-10-2018 COP00_06230 396d5c6c0ed6fdd804d3c81042e54665 322 Pfam PF04229 GrpB protein 152 309 5.0E-53 T 13-10-2018 IPR007344 GrpB/Dephospho-CoA kinase COP00_06230 396d5c6c0ed6fdd804d3c81042e54665 322 Gene3D G3DSA:3.40.630.30 4 147 4.0E-20 T 13-10-2018 COP00_06230 396d5c6c0ed6fdd804d3c81042e54665 322 Pfam PF13673 Acetyltransferase (GNAT) domain 42 139 1.5E-15 T 13-10-2018 IPR000182 GNAT domain COP00_02935 45d71c1ba930a7e886ea399eee7506cd 253 SUPERFAMILY SSF53335 5 248 4.16E-49 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase COP00_02935 45d71c1ba930a7e886ea399eee7506cd 253 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 35 55 2.8E-29 T 13-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 COP00_02935 45d71c1ba930a7e886ea399eee7506cd 253 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 205 223 2.8E-29 T 13-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 COP00_02935 45d71c1ba930a7e886ea399eee7506cd 253 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 186 203 2.8E-29 T 13-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 COP00_02935 45d71c1ba930a7e886ea399eee7506cd 253 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 9 23 2.8E-29 T 13-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 COP00_02935 45d71c1ba930a7e886ea399eee7506cd 253 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 228 248 2.8E-29 T 13-10-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 COP00_02935 45d71c1ba930a7e886ea399eee7506cd 253 Pfam PF01555 DNA methylase 10 245 1.9E-46 T 13-10-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 COP00_02935 45d71c1ba930a7e886ea399eee7506cd 253 ProSitePatterns PS00093 N-4 cytosine-specific DNA methylases signature. 14 19 - T 13-10-2018 IPR017985 DNA methylase, N-4 cytosine-specific, conserved site GO:0003677|GO:0015667|GO:0090124 COP00_08970 5209cb84a7497b5aa779950759a5641e 186 Gene3D G3DSA:3.30.110.10 94 186 9.4E-37 T 13-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 COP00_08970 5209cb84a7497b5aa779950759a5641e 186 SUPERFAMILY SSF55200 97 186 7.98E-33 T 13-10-2018 IPR036788 Translation initiation factor 3 (IF-3), C-terminal domain superfamily GO:0006413 Reactome: R-HSA-5368286 COP00_08970 5209cb84a7497b5aa779950759a5641e 186 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 16 185 30.871 T 13-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 COP00_08970 5209cb84a7497b5aa779950759a5641e 186 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 22 184 1.6E-76 T 13-10-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 COP00_08970 5209cb84a7497b5aa779950759a5641e 186 SUPERFAMILY SSF54364 20 93 2.35E-29 T 13-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 COP00_08970 5209cb84a7497b5aa779950759a5641e 186 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 98 183 1.4E-37 T 13-10-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 COP00_08970 5209cb84a7497b5aa779950759a5641e 186 ProSitePatterns PS00938 Initiation factor 3 signature. 73 86 - T 13-10-2018 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 COP00_08970 5209cb84a7497b5aa779950759a5641e 186 Gene3D G3DSA:3.10.20.80 16 93 2.0E-34 T 13-10-2018 IPR036787 Translation initiation factor 3 (IF-3), N-terminal domain superfamily GO:0003743|GO:0006413 Reactome: R-HSA-5368286 COP00_08970 5209cb84a7497b5aa779950759a5641e 186 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 22 91 4.9E-32 T 13-10-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 COP00_00300 932716d9b59a059892a6e48472b08f4a 80 Pfam PF08796 Protein of unknown function (DUF1797) 7 78 5.5E-26 T 13-10-2018 IPR014904 Protein of unknown function DUF1797 COP00_00300 932716d9b59a059892a6e48472b08f4a 80 PIRSF PIRSF037356 1 79 7.3E-36 T 13-10-2018 IPR014904 Protein of unknown function DUF1797 COP00_00300 932716d9b59a059892a6e48472b08f4a 80 SUPERFAMILY SSF143567 2 79 2.88E-28 T 13-10-2018 IPR038073 YkuJ-like superfamily COP00_00300 932716d9b59a059892a6e48472b08f4a 80 Gene3D G3DSA:3.30.720.20 1 80 5.9E-36 T 13-10-2018 IPR038073 YkuJ-like superfamily COP00_13265 f870206c213f01546065a9069ed81959 352 Gene3D G3DSA:3.40.50.720 4 321 8.8E-130 T 13-10-2018 COP00_13265 f870206c213f01546065a9069ed81959 352 Gene3D G3DSA:3.90.25.10 202 330 8.8E-130 T 13-10-2018 COP00_13265 f870206c213f01546065a9069ed81959 352 SUPERFAMILY SSF51735 1 348 4.54E-91 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily COP00_13265 f870206c213f01546065a9069ed81959 352 Pfam PF16363 GDP-mannose 4,6 dehydratase 5 322 1.0E-96 T 13-10-2018 IPR016040 NAD(P)-binding domain COP00_13265 f870206c213f01546065a9069ed81959 352 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 4 336 2.8E-143 T 13-10-2018 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|KEGG: 00525+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 COP00_11440 bb27ee94f4d3b83342407b3cc97e465a 304 Pfam PF00294 pfkB family carbohydrate kinase 11 287 5.0E-51 T 13-10-2018 IPR011611 Carbohydrate kinase PfkB COP00_11440 bb27ee94f4d3b83342407b3cc97e465a 304 Gene3D G3DSA:3.40.1190.20 1 304 5.5E-92 T 13-10-2018 IPR029056 Ribokinase-like COP00_11440 bb27ee94f4d3b83342407b3cc97e465a 304 PIRSF PIRSF000535 1 304 1.8E-70 T 13-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 COP00_11440 bb27ee94f4d3b83342407b3cc97e465a 304 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 2 302 4.0E-99 T 13-10-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 COP00_11440 bb27ee94f4d3b83342407b3cc97e465a 304 TIGRFAM TIGR03828 pfkB: 1-phosphofructokinase 2 302 4.9E-101 T 13-10-2018 IPR022463 Fructose 1-phosphate kinase GO:0008662 KEGG: 00051+2.7.1.56 COP00_11440 bb27ee94f4d3b83342407b3cc97e465a 304 SUPERFAMILY SSF53613 1 285 2.18E-61 T 13-10-2018 IPR029056 Ribokinase-like COP00_23280 91f3b541346b8e3b931eb8ed5bf9aca0 390 Pfam PF00589 Phage integrase family 181 365 6.5E-26 T 13-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 COP00_23280 91f3b541346b8e3b931eb8ed5bf9aca0 390 Gene3D G3DSA:1.10.150.130 71 178 9.9E-25 T 13-10-2018 IPR010998 Integrase/recombinase, N-terminal COP00_23280 91f3b541346b8e3b931eb8ed5bf9aca0 390 SUPERFAMILY SSF56349 75 371 8.24E-62 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 COP00_23280 91f3b541346b8e3b931eb8ed5bf9aca0 390 Gene3D G3DSA:1.10.443.10 179 378 6.4E-47 T 13-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 COP00_23280 91f3b541346b8e3b931eb8ed5bf9aca0 390 Pfam PF14659 Phage integrase, N-terminal SAM-like domain 76 134 1.0E-12 T 13-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 COP00_06250 e25e3fe58e8aad0e9312ba87722a2177 199 SUPERFAMILY SSF53474 31 146 1.2E-24 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold COP00_06250 e25e3fe58e8aad0e9312ba87722a2177 199 Gene3D G3DSA:3.40.50.1820 32 199 3.4E-49 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold COP00_06250 e25e3fe58e8aad0e9312ba87722a2177 199 Pfam PF01674 Lipase (class 2) 34 129 2.6E-12 T 13-10-2018 IPR002918 Lipase EstA/Esterase EstB GO:0016787 KEGG: 00561+3.1.1.3|MetaCyc: PWY-6857 COP00_22360 bc2a74d9b6d0113814bc9ef53b08e934 203 Pfam PF09335 SNARE associated Golgi protein 42 160 2.8E-21 T 13-10-2018 IPR032816 SNARE associated Golgi protein COP00_00420 eae399a11c7537c0a59d62391a7ce478 595 SMART SM00382 379 565 4.9E-13 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_00420 eae399a11c7537c0a59d62391a7ce478 595 SUPERFAMILY SSF90123 23 340 2.75E-77 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 COP00_00420 eae399a11c7537c0a59d62391a7ce478 595 Pfam PF00005 ABC transporter 370 519 1.4E-30 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 COP00_00420 eae399a11c7537c0a59d62391a7ce478 595 ProSitePatterns PS00211 ABC transporters family signature. 491 505 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 COP00_00420 eae399a11c7537c0a59d62391a7ce478 595 Gene3D G3DSA:3.40.50.300 350 594 3.1E-89 T 13-10-2018 COP00_00420 eae399a11c7537c0a59d62391a7ce478 595 Gene3D G3DSA:1.20.1560.10 8 340 3.2E-89 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 COP00_00420 eae399a11c7537c0a59d62391a7ce478 595 Pfam PF00664 ABC transporter transmembrane region 38 304 5.6E-43 T 13-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 COP00_00420 eae399a11c7537c0a59d62391a7ce478 595 SUPERFAMILY SSF52540 343 590 9.13E-88 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_06625 e772a86652d38a4041bde805f6805843 217 Gene3D G3DSA:3.30.300.270 102 217 1.8E-38 T 13-10-2018 IPR038503 Stage III sporulation protein AH-like superfamily COP00_06625 e772a86652d38a4041bde805f6805843 217 Pfam PF12685 SpoIIIAH-like protein 6 204 5.0E-41 T 13-10-2018 IPR024232 Stage III sporulation protein AH-like COP00_17235 bbaabd27857dd7af1017152f4abdf691 172 Pfam PF06114 IrrE N-terminal-like domain 30 150 9.1E-18 T 13-10-2018 IPR010359 IrrE N-terminal-like domain COP00_17235 bbaabd27857dd7af1017152f4abdf691 172 Gene3D G3DSA:3.40.390.50 3 114 1.2E-5 T 13-10-2018 COP00_21950 f9522e48b4dd34b3acbf649512e0d069 644 TIGRFAM TIGR03604 TOMM_cyclo_SagD: thiazole/oxazole-forming peptide maturase, SagD family component 261 644 2.8E-125 T 13-10-2018 IPR027624 Thiazole/oxazole-forming peptide maturase, SagD family component COP00_21950 f9522e48b4dd34b3acbf649512e0d069 644 TIGRFAM TIGR00702 TIGR00702: YcaO-type kinase domain 261 599 1.3E-23 T 13-10-2018 IPR003776 YcaO-like domain COP00_21950 f9522e48b4dd34b3acbf649512e0d069 644 Gene3D G3DSA:3.40.50.720 13 184 9.4E-24 T 13-10-2018 COP00_21950 f9522e48b4dd34b3acbf649512e0d069 644 Gene3D G3DSA:2.40.50.820 291 370 7.2E-48 T 13-10-2018 COP00_21950 f9522e48b4dd34b3acbf649512e0d069 644 TIGRFAM TIGR03882 cyclo_dehyd_2: bacteriocin biosynthesis cyclodehydratase domain 68 232 1.6E-43 T 13-10-2018 IPR022291 Bacteriocin biosynthesis, cyclodehydratase domain COP00_21950 f9522e48b4dd34b3acbf649512e0d069 644 Gene3D G3DSA:3.30.160.660 407 547 7.2E-48 T 13-10-2018 COP00_21950 f9522e48b4dd34b3acbf649512e0d069 644 Gene3D G3DSA:1.10.490.140 269 600 7.2E-48 T 13-10-2018 COP00_21950 f9522e48b4dd34b3acbf649512e0d069 644 Pfam PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding 261 599 1.0E-91 T 13-10-2018 IPR003776 YcaO-like domain COP00_23950 3fd9cf79c408616efdde2c17e80ad8e2 415 SUPERFAMILY SSF53720 2 414 1.22E-110 T 13-10-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0016491|GO:0055114 COP00_23950 3fd9cf79c408616efdde2c17e80ad8e2 415 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 11 404 1.1E-170 T 13-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 COP00_23950 3fd9cf79c408616efdde2c17e80ad8e2 415 PIRSF PIRSF000151 1 415 9.6E-176 T 13-10-2018 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922 COP00_23950 3fd9cf79c408616efdde2c17e80ad8e2 415 Gene3D G3DSA:3.40.309.10 224 372 9.9E-166 T 13-10-2018 IPR016163 Aldehyde dehydrogenase, C-terminal GO:0016491|GO:0016620|GO:0055114 COP00_23950 3fd9cf79c408616efdde2c17e80ad8e2 415 Pfam PF00171 Aldehyde dehydrogenase family 300 377 6.1E-7 T 13-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 COP00_23950 3fd9cf79c408616efdde2c17e80ad8e2 415 Pfam PF00171 Aldehyde dehydrogenase family 4 282 9.4E-12 T 13-10-2018 IPR015590 Aldehyde dehydrogenase domain GO:0016491|GO:0055114 COP00_23950 3fd9cf79c408616efdde2c17e80ad8e2 415 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 3 414 41.34 T 13-10-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 COP00_23950 3fd9cf79c408616efdde2c17e80ad8e2 415 Gene3D G3DSA:3.40.605.10 16 409 9.9E-166 T 13-10-2018 IPR016162 Aldehyde dehydrogenase, N-terminal GO:0016491|GO:0055114 COP00_23950 3fd9cf79c408616efdde2c17e80ad8e2 415 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 321 342 - T 13-10-2018 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 COP00_19580 50b4270f492680a124d0ea9a547a1290 310 Gene3D G3DSA:3.40.50.300 11 219 7.0E-8 T 13-10-2018 COP00_19580 50b4270f492680a124d0ea9a547a1290 310 SUPERFAMILY SSF52540 14 167 2.76E-9 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_19580 50b4270f492680a124d0ea9a547a1290 310 Pfam PF13479 AAA domain 15 182 3.2E-10 T 13-10-2018 COP00_23330 50b4270f492680a124d0ea9a547a1290 310 Gene3D G3DSA:3.40.50.300 11 219 7.0E-8 T 13-10-2018 COP00_23330 50b4270f492680a124d0ea9a547a1290 310 SUPERFAMILY SSF52540 14 167 2.76E-9 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_23330 50b4270f492680a124d0ea9a547a1290 310 Pfam PF13479 AAA domain 15 182 3.2E-10 T 13-10-2018 COP00_17900 ea8b2bb7568da094e519b6d45bb93374 442 SUPERFAMILY SSF46548 16 105 3.4E-19 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 COP00_17900 ea8b2bb7568da094e519b6d45bb93374 442 PIRSF PIRSF000139 6 439 7.6E-139 T 13-10-2018 COP00_17900 ea8b2bb7568da094e519b6d45bb93374 442 Gene3D G3DSA:1.10.1060.10 1 114 1.8E-9 T 13-10-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 COP00_17900 ea8b2bb7568da094e519b6d45bb93374 442 Pfam PF02754 Cysteine-rich domain 199 280 1.9E-19 T 13-10-2018 IPR004017 Cysteine-rich domain COP00_17900 ea8b2bb7568da094e519b6d45bb93374 442 Pfam PF02754 Cysteine-rich domain 328 413 3.2E-16 T 13-10-2018 IPR004017 Cysteine-rich domain COP00_17900 ea8b2bb7568da094e519b6d45bb93374 442 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 78 89 - T 13-10-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site COP00_17900 ea8b2bb7568da094e519b6d45bb93374 442 Pfam PF13183 4Fe-4S dicluster domain 23 92 1.2E-12 T 13-10-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain COP00_06580 aec0e1d4224d71dfdfaf803ac2f74b11 633 ProSitePatterns PS00801 Transketolase signature 1. 28 47 - T 13-10-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 COP00_06580 aec0e1d4224d71dfdfaf803ac2f74b11 633 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 5 278 2.8E-115 T 13-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 COP00_06580 aec0e1d4224d71dfdfaf803ac2f74b11 633 ProSitePatterns PS00802 Transketolase signature 2. 422 438 - T 13-10-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 COP00_06580 aec0e1d4224d71dfdfaf803ac2f74b11 633 Pfam PF02780 Transketolase, C-terminal domain 493 615 6.3E-31 T 13-10-2018 IPR033248 Transketolase, C-terminal domain COP00_06580 aec0e1d4224d71dfdfaf803ac2f74b11 633 SUPERFAMILY SSF52922 489 620 2.62E-32 T 13-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 COP00_06580 aec0e1d4224d71dfdfaf803ac2f74b11 633 Pfam PF02779 Transketolase, pyrimidine binding domain 316 477 1.0E-39 T 13-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain COP00_06580 aec0e1d4224d71dfdfaf803ac2f74b11 633 SUPERFAMILY SSF52518 315 503 4.38E-55 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold COP00_06580 aec0e1d4224d71dfdfaf803ac2f74b11 633 SUPERFAMILY SSF52518 7 378 1.33E-71 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold COP00_06580 aec0e1d4224d71dfdfaf803ac2f74b11 633 SMART SM00861 316 481 3.4E-65 T 13-10-2018 IPR005475 Transketolase-like, pyrimidine-binding domain COP00_06580 aec0e1d4224d71dfdfaf803ac2f74b11 633 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 2 624 44.648 T 13-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 COP00_06580 aec0e1d4224d71dfdfaf803ac2f74b11 633 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 4 621 1.4E-302 T 13-10-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 COP00_06580 aec0e1d4224d71dfdfaf803ac2f74b11 633 Gene3D G3DSA:3.40.50.970 313 489 1.2E-65 T 13-10-2018 COP00_06580 aec0e1d4224d71dfdfaf803ac2f74b11 633 Gene3D G3DSA:3.40.50.920 493 626 4.4E-38 T 13-10-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824 COP00_06385 37b1f2a2108497a7888ba8b36425bc32 492 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 181 187 - T 13-10-2018 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 COP00_06385 37b1f2a2108497a7888ba8b36425bc32 492 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 9 490 3.0E-205 T 13-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 COP00_06385 37b1f2a2108497a7888ba8b36425bc32 492 PIRSF PIRSF000110 1 492 4.5E-188 T 13-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 COP00_06385 37b1f2a2108497a7888ba8b36425bc32 492 SUPERFAMILY SSF55347 186 490 1.11E-116 T 13-10-2018 COP00_06385 37b1f2a2108497a7888ba8b36425bc32 492 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 9 491 90.836 T 13-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 COP00_06385 37b1f2a2108497a7888ba8b36425bc32 492 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 194 489 1.5E-114 T 13-10-2018 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 COP00_06385 37b1f2a2108497a7888ba8b36425bc32 492 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 147 160 3.3E-47 T 13-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 COP00_06385 37b1f2a2108497a7888ba8b36425bc32 492 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 241 257 3.3E-47 T 13-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 COP00_06385 37b1f2a2108497a7888ba8b36425bc32 492 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 171 199 3.3E-47 T 13-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 COP00_06385 37b1f2a2108497a7888ba8b36425bc32 492 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 223 240 3.3E-47 T 13-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 COP00_06385 37b1f2a2108497a7888ba8b36425bc32 492 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 332 358 3.3E-47 T 13-10-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 COP00_06385 37b1f2a2108497a7888ba8b36425bc32 492 Gene3D G3DSA:3.40.50.720 6 179 5.2E-60 T 13-10-2018 COP00_06385 37b1f2a2108497a7888ba8b36425bc32 492 Gene3D G3DSA:3.30.360.10 180 491 8.0E-125 T 13-10-2018 COP00_06385 37b1f2a2108497a7888ba8b36425bc32 492 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 13 191 6.7E-62 T 13-10-2018 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 COP00_06385 37b1f2a2108497a7888ba8b36425bc32 492 SUPERFAMILY SSF51735 8 188 1.0E-63 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily COP00_22610 fbe5bca59efd29af432e03d51b936189 448 Gene3D G3DSA:3.90.1150.10 17 441 2.3E-138 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 COP00_22610 fbe5bca59efd29af432e03d51b936189 448 PIRSF PIRSF000521 10 136 1.8E-5 T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 COP00_22610 fbe5bca59efd29af432e03d51b936189 448 PIRSF PIRSF000521 109 446 5.7E-37 T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 COP00_22610 fbe5bca59efd29af432e03d51b936189 448 Gene3D G3DSA:3.40.640.10 66 334 2.3E-138 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 COP00_22610 fbe5bca59efd29af432e03d51b936189 448 TIGRFAM TIGR00709 dat: 2,4-diaminobutyrate 4-transaminase 12 447 5.1E-172 T 13-10-2018 IPR004637 2,4-diaminobutyrate 4-transaminase GO:0008483|GO:0009058 KEGG: 00260+2.6.1.76|MetaCyc: PWY-6409|MetaCyc: PWY-6562|MetaCyc: PWY-761|MetaCyc: PWY-7855|MetaCyc: PWY-7988 COP00_22610 fbe5bca59efd29af432e03d51b936189 448 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 253 290 - T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 COP00_22610 fbe5bca59efd29af432e03d51b936189 448 Pfam PF00202 Aminotransferase class-III 30 443 3.3E-95 T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 COP00_22610 fbe5bca59efd29af432e03d51b936189 448 SUPERFAMILY SSF53383 19 443 8.11E-119 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase COP00_03855 d4a9fa0707dba85d4c68ab5de21a56de 202 Pfam PF08937 MTH538 TIR-like domain (DUF1863) 3 119 1.1E-22 T 13-10-2018 IPR015032 MTH538 TIR-like domain COP00_03855 d4a9fa0707dba85d4c68ab5de21a56de 202 SUPERFAMILY SSF52200 5 90 3.92E-7 T 13-10-2018 IPR035897 Toll/interleukin-1 receptor homology (TIR) domain superfamily COP00_03855 d4a9fa0707dba85d4c68ab5de21a56de 202 Gene3D G3DSA:3.40.50.10140 3 110 1.0E-7 T 13-10-2018 IPR035897 Toll/interleukin-1 receptor homology (TIR) domain superfamily COP00_19365 a4eb98668bbcbeae8ea29fa569870302 406 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 9 394 4.8E-137 T 13-10-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0006855|GO:0015238|GO:0016021 COP00_19365 a4eb98668bbcbeae8ea29fa569870302 406 Pfam PF07690 Major Facilitator Superfamily 19 355 9.5E-41 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 COP00_19365 a4eb98668bbcbeae8ea29fa569870302 406 SUPERFAMILY SSF103473 5 401 3.53E-63 T 13-10-2018 IPR036259 MFS transporter superfamily COP00_19365 a4eb98668bbcbeae8ea29fa569870302 406 Gene3D G3DSA:1.20.1720.10 13 393 1.0E-95 T 13-10-2018 COP00_08650 5fc6ff3378e92a09f336d1b14dd64ecb 177 Pfam PF00583 Acetyltransferase (GNAT) family 31 133 7.8E-12 T 13-10-2018 IPR000182 GNAT domain COP00_08650 5fc6ff3378e92a09f336d1b14dd64ecb 177 Gene3D G3DSA:3.40.630.30 1 177 1.1E-44 T 13-10-2018 COP00_08650 5fc6ff3378e92a09f336d1b14dd64ecb 177 SUPERFAMILY SSF55729 1 140 7.69E-24 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase COP00_18790 89e429beb8502bdbbd26daf63c2c9b39 167 Gene3D G3DSA:2.60.120.10 1 167 5.4E-68 T 13-10-2018 IPR014710 RmlC-like jelly roll fold COP00_18790 89e429beb8502bdbbd26daf63c2c9b39 167 SUPERFAMILY SSF51182 42 160 4.6E-11 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily COP00_18050 896b804eb330bd1ba1bcee2a57aa7091 281 SUPERFAMILY SSF161098 86 269 1.05E-38 T 13-10-2018 IPR035906 MetI-like superfamily COP00_18050 896b804eb330bd1ba1bcee2a57aa7091 281 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 108 265 1.2E-22 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 COP00_18050 896b804eb330bd1ba1bcee2a57aa7091 281 Gene3D G3DSA:1.10.3720.10 85 274 9.4E-35 T 13-10-2018 IPR035906 MetI-like superfamily COP00_13320 d1045f410764e0bd8727056660f985c7 327 ProDom PD024513 PERMEASE 2-KETO-3-DEOXYGLUCONATE MEMBRANE TRANSMEMBRANE SUGAR KDG SYMPORT INNER 2-KETO-3-DEOXY-D-GLUCONATE SYSTEM 14 316 3.0E-118 T 13-10-2018 IPR004684 2-keto-3-deoxygluconate permease GO:0008643|GO:0015649|GO:0016021|GO:0046411 COP00_13320 d1045f410764e0bd8727056660f985c7 327 TIGRFAM TIGR00793 kdgT: 2-keto-3-deoxygluconate transporter 1 314 3.4E-167 T 13-10-2018 IPR018395 2-keto-3-deoxygluconate permease, subgroup GO:0008643|GO:0015649|GO:0016021|GO:0046411 COP00_13320 d1045f410764e0bd8727056660f985c7 327 Pfam PF03812 2-keto-3-deoxygluconate permease 3 312 6.6E-114 T 13-10-2018 IPR004684 2-keto-3-deoxygluconate permease GO:0008643|GO:0015649|GO:0016021|GO:0046411 COP00_14480 97b99bf1b2c5c61bb451f74e33e0f647 209 Pfam PF01081 KDPG and KHG aldolase 6 184 2.9E-42 T 13-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 COP00_14480 97b99bf1b2c5c61bb451f74e33e0f647 209 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 6 205 8.5E-54 T 13-10-2018 IPR000887 KDPG/KHG aldolase GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 COP00_14480 97b99bf1b2c5c61bb451f74e33e0f647 209 Gene3D G3DSA:3.20.20.70 1 209 4.8E-74 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 COP00_14480 97b99bf1b2c5c61bb451f74e33e0f647 209 SUPERFAMILY SSF51569 3 207 2.01E-62 T 13-10-2018 COP00_18965 b81a09dab377d2537ed19662acfbdfd7 312 SMART SM00382 29 210 8.0E-16 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_18965 b81a09dab377d2537ed19662acfbdfd7 312 SUPERFAMILY SSF52540 3 216 1.62E-62 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_18965 b81a09dab377d2537ed19662acfbdfd7 312 Gene3D G3DSA:3.40.50.300 2 270 1.6E-61 T 13-10-2018 COP00_18965 b81a09dab377d2537ed19662acfbdfd7 312 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 COP00_18965 b81a09dab377d2537ed19662acfbdfd7 312 Pfam PF00005 ABC transporter 20 161 2.6E-32 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 COP00_08450 b51c8056c05f02691055f4b663aed935 109 SUPERFAMILY SSF46785 8 94 1.02E-26 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_08450 b51c8056c05f02691055f4b663aed935 109 Gene3D G3DSA:1.10.10.10 1 109 1.9E-30 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_08450 b51c8056c05f02691055f4b663aed935 109 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 43 58 9.1E-12 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 COP00_08450 b51c8056c05f02691055f4b663aed935 109 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 11 26 9.1E-12 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 COP00_08450 b51c8056c05f02691055f4b663aed935 109 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 58 73 9.1E-12 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 COP00_08450 b51c8056c05f02691055f4b663aed935 109 Pfam PF01022 Bacterial regulatory protein, arsR family 16 61 6.5E-14 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 COP00_08450 b51c8056c05f02691055f4b663aed935 109 SMART SM00418 9 83 1.6E-25 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 COP00_08735 1de9280ab20c4c690198dd224ac72760 202 Gene3D G3DSA:1.20.1300.10 2 202 4.6E-48 T 13-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 COP00_08735 1de9280ab20c4c690198dd224ac72760 202 TIGRFAM TIGR02046 sdhC_b558_fam: succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family 6 202 8.1E-63 T 13-10-2018 IPR011138 Succinate dehydrogenase cytochrome b558 subunit COP00_08735 1de9280ab20c4c690198dd224ac72760 202 PIRSF PIRSF000170 1 202 5.4E-102 T 13-10-2018 IPR016002 Succinate dehydrogenase cytochrome b558 subunit, Firmicute COP00_08735 1de9280ab20c4c690198dd224ac72760 202 SUPERFAMILY SSF81343 4 201 4.32E-61 T 13-10-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 COP00_08735 1de9280ab20c4c690198dd224ac72760 202 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 92 192 4.2E-12 T 13-10-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 COP00_05375 9a9942d6a5acff794eb210d36709d333 639 Gene3D G3DSA:3.40.50.300 458 617 7.0E-24 T 13-10-2018 COP00_05375 9a9942d6a5acff794eb210d36709d333 639 Pfam PF13307 Helicase C-terminal domain 482 614 1.2E-23 T 13-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 COP00_05375 9a9942d6a5acff794eb210d36709d333 639 SMART SM00491 497 617 2.5E-7 T 13-10-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 COP00_05375 9a9942d6a5acff794eb210d36709d333 639 SUPERFAMILY SSF52540 52 617 3.94E-20 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_05375 9a9942d6a5acff794eb210d36709d333 639 Gene3D G3DSA:3.40.50.300 37 316 1.8E-28 T 13-10-2018 COP00_17070 ce040f178a0b20e1751da3f37cb89d4c 294 SMART SM00382 29 208 3.6E-12 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_17070 ce040f178a0b20e1751da3f37cb89d4c 294 ProSitePatterns PS00211 ABC transporters family signature. 131 145 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 COP00_17070 ce040f178a0b20e1751da3f37cb89d4c 294 Gene3D G3DSA:3.40.50.300 2 263 1.5E-45 T 13-10-2018 COP00_17070 ce040f178a0b20e1751da3f37cb89d4c 294 Pfam PF00005 ABC transporter 20 159 3.9E-24 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 COP00_17070 ce040f178a0b20e1751da3f37cb89d4c 294 SUPERFAMILY SSF52540 3 223 6.45E-48 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_17965 0442ada52146377273c566341d02e732 195 Gene3D G3DSA:1.10.357.10 57 193 4.3E-11 T 13-10-2018 COP00_17965 0442ada52146377273c566341d02e732 195 Gene3D G3DSA:1.10.10.60 4 56 2.1E-10 T 13-10-2018 COP00_17965 0442ada52146377273c566341d02e732 195 Pfam PF00440 Bacterial regulatory proteins, tetR family 21 61 1.0E-9 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 COP00_17965 0442ada52146377273c566341d02e732 195 SUPERFAMILY SSF46689 4 78 1.4E-14 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 COP00_03540 392fd5b6f67c32f601157d963f0b8fc8 179 SUPERFAMILY SSF52540 7 171 7.41E-17 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_03540 392fd5b6f67c32f601157d963f0b8fc8 179 Gene3D G3DSA:3.40.50.300 5 178 3.4E-38 T 13-10-2018 COP00_03540 392fd5b6f67c32f601157d963f0b8fc8 179 Pfam PF07931 Chloramphenicol phosphotransferase-like protein 8 171 6.7E-8 T 13-10-2018 IPR012853 Chloramphenicol phosphotransferase-like GO:0005524|GO:0016740 COP00_17815 5fbabaccefc3baba852eccc917f01318 249 Pfam PF12730 ABC-2 family transporter protein 6 135 3.0E-7 T 13-10-2018 IPR032688 ABC-2 family transporter protein GO:0055085 COP00_17815 5fbabaccefc3baba852eccc917f01318 249 TIGRFAM TIGR03732 lanti_perm_MutE: lantibiotic protection ABC transporter permease subunit, MutE/EpiE family 4 239 2.7E-92 T 13-10-2018 IPR021205 Lantibiotic ABC transporter permease subunit, SpaE/MutE COP00_24030 44ae281973dfcd5d79d1e11f5a7c3109 153 PRINTS PR00598 Bacterial regulatory protein MarR family signature 93 109 2.6E-13 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 COP00_24030 44ae281973dfcd5d79d1e11f5a7c3109 153 PRINTS PR00598 Bacterial regulatory protein MarR family signature 123 143 2.6E-13 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 COP00_24030 44ae281973dfcd5d79d1e11f5a7c3109 153 PRINTS PR00598 Bacterial regulatory protein MarR family signature 74 89 2.6E-13 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 COP00_24030 44ae281973dfcd5d79d1e11f5a7c3109 153 SMART SM00347 33 133 2.1E-34 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 COP00_24030 44ae281973dfcd5d79d1e11f5a7c3109 153 SUPERFAMILY SSF46785 12 143 2.86E-32 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_24030 44ae281973dfcd5d79d1e11f5a7c3109 153 Pfam PF01047 MarR family 41 98 3.9E-20 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 COP00_24030 44ae281973dfcd5d79d1e11f5a7c3109 153 ProSitePatterns PS01117 MarR-type HTH domain signature. 72 106 - T 13-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site COP00_24030 44ae281973dfcd5d79d1e11f5a7c3109 153 Gene3D G3DSA:1.10.10.10 3 149 1.2E-33 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_18115 1e34f646558acb1946bab4f1095f88f3 305 SUPERFAMILY SSF51730 37 300 1.22E-71 T 13-10-2018 IPR029041 FAD-linked oxidoreductase-like COP00_18115 1e34f646558acb1946bab4f1095f88f3 305 Pfam PF01619 Proline dehydrogenase 47 294 9.0E-35 T 13-10-2018 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|Reactome: R-HSA-70688 COP00_18115 1e34f646558acb1946bab4f1095f88f3 305 PIRSF PIRSF000196 1 305 6.7E-127 T 13-10-2018 IPR008219 Proline dehydrogenase, bacteria and archaea GO:0004657|GO:0010133 KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922 COP00_18115 1e34f646558acb1946bab4f1095f88f3 305 Gene3D G3DSA:3.20.20.530 22 305 1.1E-89 T 13-10-2018 COP00_05360 bde3cb3661ce1bf7fc98e567da6ab7bd 438 Pfam PF00860 Permease family 7 385 1.7E-122 T 13-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 COP00_05360 bde3cb3661ce1bf7fc98e567da6ab7bd 438 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 5 415 2.7E-144 T 13-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 COP00_05360 bde3cb3661ce1bf7fc98e567da6ab7bd 438 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 332 352 - T 13-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 COP00_05360 bde3cb3661ce1bf7fc98e567da6ab7bd 438 TIGRFAM TIGR03173 pbuX: xanthine permease 11 417 3.3E-169 T 13-10-2018 IPR017588 Uric acid permease UacT-like GO:0016021|GO:0022857|GO:0055085 COP00_21555 ed9ef4e90d9b83933e7c573233e3d405 271 Gene3D G3DSA:3.40.190.10 105 215 6.3E-96 T 13-10-2018 COP00_21555 ed9ef4e90d9b83933e7c573233e3d405 271 Pfam PF03180 NLPA lipoprotein 28 263 3.5E-89 T 13-10-2018 IPR004872 Lipoprotein NlpA family COP00_21555 ed9ef4e90d9b83933e7c573233e3d405 271 PIRSF PIRSF002854 1 264 2.2E-93 T 13-10-2018 IPR004872 Lipoprotein NlpA family COP00_21555 ed9ef4e90d9b83933e7c573233e3d405 271 SUPERFAMILY SSF53850 27 263 2.37E-83 T 13-10-2018 COP00_21555 ed9ef4e90d9b83933e7c573233e3d405 271 Gene3D G3DSA:3.40.190.10 29 254 6.3E-96 T 13-10-2018 COP00_20590 58dbc567fb6806f89c6b091f28d8dd69 376 Pfam PF00270 DEAD/DEAH box helicase 28 192 1.1E-42 T 13-10-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 COP00_20590 58dbc567fb6806f89c6b091f28d8dd69 376 SMART SM00487 23 220 6.9E-48 T 13-10-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain COP00_20590 58dbc567fb6806f89c6b091f28d8dd69 376 Pfam PF00271 Helicase conserved C-terminal domain 228 335 2.4E-23 T 13-10-2018 IPR001650 Helicase, C-terminal COP00_20590 58dbc567fb6806f89c6b091f28d8dd69 376 Gene3D G3DSA:3.40.50.300 4 208 6.3E-60 T 13-10-2018 COP00_20590 58dbc567fb6806f89c6b091f28d8dd69 376 Gene3D G3DSA:3.40.50.300 211 372 7.6E-39 T 13-10-2018 COP00_20590 58dbc567fb6806f89c6b091f28d8dd69 376 SMART SM00490 255 335 2.1E-23 T 13-10-2018 IPR001650 Helicase, C-terminal COP00_20590 58dbc567fb6806f89c6b091f28d8dd69 376 SUPERFAMILY SSF52540 71 355 1.49E-58 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_17600 ccdcf745994bf74f49ee73c47b66053c 292 Hamap MF_01282 Virginiamycin B lyase [vgb]. 7 291 41.616 T 13-10-2018 IPR011217 Streptogramin lyase GO:0000287|GO:0016835|GO:0017001|GO:0046677 COP00_17600 ccdcf745994bf74f49ee73c47b66053c 292 PIRSF PIRSF026412 2 292 2.1E-97 T 13-10-2018 IPR011217 Streptogramin lyase GO:0000287|GO:0016835|GO:0017001|GO:0046677 COP00_17600 ccdcf745994bf74f49ee73c47b66053c 292 SUPERFAMILY SSF101898 8 252 2.01E-38 T 13-10-2018 COP00_17600 ccdcf745994bf74f49ee73c47b66053c 292 Gene3D G3DSA:2.130.10.10 43 292 6.8E-98 T 13-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 COP00_18890 f2ebbada9343374872a766817bd7decc 86 Pfam PF04226 Transglycosylase associated protein 34 79 4.1E-11 T 13-10-2018 IPR007341 Transglycosylase-associated protein GO:0016021 COP00_17170 d58418f4da16669c2a7485c86fe6422d 289 SUPERFAMILY SSF81301 1 134 2.42E-50 T 13-10-2018 COP00_17170 d58418f4da16669c2a7485c86fe6422d 289 SUPERFAMILY SSF81631 137 280 3.84E-55 T 13-10-2018 COP00_17170 d58418f4da16669c2a7485c86fe6422d 289 Pfam PF04439 Streptomycin adenylyltransferase 1 278 2.7E-128 T 13-10-2018 IPR007530 Aminoglycoside 6-adenylyltransferase COP00_17170 d58418f4da16669c2a7485c86fe6422d 289 Gene3D G3DSA:3.30.460.10 9 148 7.0E-60 T 13-10-2018 COP00_17170 d58418f4da16669c2a7485c86fe6422d 289 Gene3D G3DSA:1.20.120.330 149 287 1.4E-47 T 13-10-2018 COP00_17170 d58418f4da16669c2a7485c86fe6422d 289 PIRSF PIRSF000812 1 284 7.7E-116 T 13-10-2018 IPR007530 Aminoglycoside 6-adenylyltransferase COP00_01570 dea697e1a2091def79741993a5854a5c 91 SUPERFAMILY SSF64376 5 88 3.79E-27 T 13-10-2018 IPR035931 YlxR-like superfamily COP00_01570 dea697e1a2091def79741993a5854a5c 91 Pfam PF04296 Protein of unknown function (DUF448) 10 82 6.5E-27 T 13-10-2018 IPR007393 Domain of unknown function DUF448 COP00_01570 dea697e1a2091def79741993a5854a5c 91 Gene3D G3DSA:3.30.1230.10 1 91 2.3E-34 T 13-10-2018 IPR035931 YlxR-like superfamily COP00_19785 e8e37d61cf0579f3abe4f63168e3b693 280 SMART SM00644 14 168 1.8E-37 T 13-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 COP00_19785 e8e37d61cf0579f3abe4f63168e3b693 280 SUPERFAMILY SSF55846 3 168 6.41E-40 T 13-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 COP00_19785 e8e37d61cf0579f3abe4f63168e3b693 280 SUPERFAMILY SSF47090 206 275 1.07E-17 T 13-10-2018 IPR036365 PGBD-like superfamily COP00_19785 e8e37d61cf0579f3abe4f63168e3b693 280 Gene3D G3DSA:3.40.80.10 3 190 2.5E-46 T 13-10-2018 IPR036505 N-acetylmuramoyl-L-alanine amidase/PGRP domain superfamily GO:0008745|GO:0009253 Reactome: R-HSA-6803157 COP00_19785 e8e37d61cf0579f3abe4f63168e3b693 280 Gene3D G3DSA:1.10.101.10 206 279 4.1E-19 T 13-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 COP00_19785 e8e37d61cf0579f3abe4f63168e3b693 280 Pfam PF01471 Putative peptidoglycan binding domain 214 274 2.1E-17 T 13-10-2018 IPR002477 Peptidoglycan binding-like COP00_19785 e8e37d61cf0579f3abe4f63168e3b693 280 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 24 153 1.2E-22 T 13-10-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 COP00_16410 3a28302806e46e7bb0b9f73b5f6ca969 285 Gene3D G3DSA:3.30.470.10 1 119 2.9E-34 T 13-10-2018 COP00_16410 3a28302806e46e7bb0b9f73b5f6ca969 285 Gene3D G3DSA:3.20.10.10 125 279 4.0E-39 T 13-10-2018 COP00_16410 3a28302806e46e7bb0b9f73b5f6ca969 285 SUPERFAMILY SSF56752 1 276 5.23E-69 T 13-10-2018 IPR036038 Aminotransferase-like, PLP-dependent enzymes GO:0003824 Reactome: R-HSA-70895 COP00_16410 3a28302806e46e7bb0b9f73b5f6ca969 285 ProSitePatterns PS00770 Aminotransferases class-IV signature. 180 209 - T 13-10-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824 Reactome: R-HSA-70895 COP00_16410 3a28302806e46e7bb0b9f73b5f6ca969 285 Pfam PF01063 Amino-transferase class IV 29 254 3.4E-49 T 13-10-2018 IPR001544 Aminotransferase class IV GO:0003824 Reactome: R-HSA-70895 COP00_16650 71362e5c95069e02d9ae080bdd2562e7 82 SUPERFAMILY SSF55315 4 81 5.03E-20 T 13-10-2018 IPR029064 50S ribosomal protein L30e-like COP00_16650 71362e5c95069e02d9ae080bdd2562e7 82 Hamap MF_00574 Putative ribosomal protein L7Ae-like. 2 82 24.29 T 13-10-2018 IPR023460 Ribosomal protein L7Ae, putative COP00_16650 71362e5c95069e02d9ae080bdd2562e7 82 Gene3D G3DSA:3.30.1330.30 1 81 1.4E-24 T 13-10-2018 IPR029064 50S ribosomal protein L30e-like COP00_16650 71362e5c95069e02d9ae080bdd2562e7 82 Pfam PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 5 81 1.8E-15 T 13-10-2018 IPR004038 Ribosomal protein L7Ae/L30e/S12e/Gadd45 COP00_16650 71362e5c95069e02d9ae080bdd2562e7 82 PRINTS PR00884 Ribosomal protein HS6 signature 30 41 4.0E-5 T 13-10-2018 IPR000948 Ribosomal protein L7Ae, prokaryotes GO:0003735|GO:0005622|GO:0005840|GO:0006412 COP00_16650 71362e5c95069e02d9ae080bdd2562e7 82 PRINTS PR00884 Ribosomal protein HS6 signature 70 82 4.0E-5 T 13-10-2018 IPR000948 Ribosomal protein L7Ae, prokaryotes GO:0003735|GO:0005622|GO:0005840|GO:0006412 COP00_16650 71362e5c95069e02d9ae080bdd2562e7 82 PRINTS PR00884 Ribosomal protein HS6 signature 20 30 4.0E-5 T 13-10-2018 IPR000948 Ribosomal protein L7Ae, prokaryotes GO:0003735|GO:0005622|GO:0005840|GO:0006412 COP00_17180 4ea5c41285a13b4920a771a19cbf39d1 233 Gene3D G3DSA:1.10.150.240 17 100 1.3E-79 T 13-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 COP00_17180 4ea5c41285a13b4920a771a19cbf39d1 233 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 96 193 1.3E-9 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 COP00_17180 4ea5c41285a13b4920a771a19cbf39d1 233 SUPERFAMILY SSF56784 4 227 1.01E-42 T 13-10-2018 IPR036412 HAD-like superfamily COP00_17180 4ea5c41285a13b4920a771a19cbf39d1 233 TIGRFAM TIGR02254 YjjG/YfnB: noncanonical pyrimidine nucleotidase, YjjG family 4 227 5.1E-88 T 13-10-2018 IPR011951 HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB GO:0016787 COP00_17180 4ea5c41285a13b4920a771a19cbf39d1 233 Pfam PF13419 Haloacid dehalogenase-like hydrolase 8 199 7.7E-18 T 13-10-2018 COP00_17180 4ea5c41285a13b4920a771a19cbf39d1 233 Gene3D G3DSA:3.40.50.1000 6 223 1.3E-79 T 13-10-2018 IPR023214 HAD superfamily COP00_19535 900c559bcbb8393e0f1daa589093fcb4 210 SMART SM00530 14 69 3.0E-10 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 COP00_19535 900c559bcbb8393e0f1daa589093fcb4 210 Gene3D G3DSA:1.10.260.40 2 71 8.2E-25 T 13-10-2018 COP00_19535 900c559bcbb8393e0f1daa589093fcb4 210 SUPERFAMILY SSF47413 9 70 5.35E-12 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 COP00_19535 900c559bcbb8393e0f1daa589093fcb4 210 Pfam PF00717 Peptidase S24-like 126 192 7.1E-16 T 13-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C COP00_19535 900c559bcbb8393e0f1daa589093fcb4 210 SUPERFAMILY SSF51306 86 206 9.29E-31 T 13-10-2018 IPR036286 LexA/Signal peptidase-like superfamily COP00_19535 900c559bcbb8393e0f1daa589093fcb4 210 Pfam PF01381 Helix-turn-helix 15 67 2.3E-11 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 COP00_19535 900c559bcbb8393e0f1daa589093fcb4 210 Gene3D G3DSA:2.10.109.10 92 210 8.8E-34 T 13-10-2018 COP00_00960 ef7d88033bf242db52e842321a1bb3c3 164 TIGRFAM TIGR03544 DivI1A_domain: DivIVA domain 3 36 8.1E-17 T 13-10-2018 IPR019933 DivIVA domain COP00_00960 ef7d88033bf242db52e842321a1bb3c3 164 Pfam PF05103 DivIVA protein 3 133 6.4E-49 T 13-10-2018 IPR007793 DivIVA family COP00_13095 8af28e34c4f35241c90de6e6e801b9a2 507 Pfam PF00460 Flagella basal body rod protein 9 39 4.1E-11 T 13-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 COP00_13095 8af28e34c4f35241c90de6e6e801b9a2 507 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 15 35 - T 13-10-2018 IPR019776 Flagellar basal body rod protein, conserved site COP00_13095 8af28e34c4f35241c90de6e6e801b9a2 507 PRINTS PR01005 Flagellar hook-associated protein signature 135 155 2.0E-9 T 13-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 COP00_13095 8af28e34c4f35241c90de6e6e801b9a2 507 PRINTS PR01005 Flagellar hook-associated protein signature 15 38 2.0E-9 T 13-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 COP00_13095 8af28e34c4f35241c90de6e6e801b9a2 507 PRINTS PR01005 Flagellar hook-associated protein signature 168 192 2.0E-9 T 13-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 COP00_13095 8af28e34c4f35241c90de6e6e801b9a2 507 SUPERFAMILY SSF64518 118 500 4.32E-23 T 13-10-2018 COP00_13095 8af28e34c4f35241c90de6e6e801b9a2 507 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 451 500 2.8E-12 T 13-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain COP00_13095 8af28e34c4f35241c90de6e6e801b9a2 507 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 8 500 8.1E-127 T 13-10-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 COP00_04875 54519ba99bac4b01fddaea78aaacf78a 421 SMART SM00363 359 421 6.8E-8 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 COP00_04875 54519ba99bac4b01fddaea78aaacf78a 421 Pfam PF01479 S4 domain 363 400 3.1E-8 T 13-10-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 COP00_04875 54519ba99bac4b01fddaea78aaacf78a 421 Gene3D G3DSA:3.40.50.620 28 245 3.7E-67 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold COP00_04875 54519ba99bac4b01fddaea78aaacf78a 421 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 31 420 6.7E-129 T 13-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 COP00_04875 54519ba99bac4b01fddaea78aaacf78a 421 Gene3D G3DSA:1.10.240.10 246 349 9.4E-37 T 13-10-2018 COP00_04875 54519ba99bac4b01fddaea78aaacf78a 421 Pfam PF00579 tRNA synthetases class I (W and Y) 60 340 1.0E-76 T 13-10-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 COP00_04875 54519ba99bac4b01fddaea78aaacf78a 421 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 70 80 - T 13-10-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 COP00_04875 54519ba99bac4b01fddaea78aaacf78a 421 Gene3D G3DSA:3.10.290.10 350 420 5.4E-20 T 13-10-2018 IPR036986 RNA-binding S4 domain superfamily GO:0003723 COP00_04875 54519ba99bac4b01fddaea78aaacf78a 421 SUPERFAMILY SSF55174 321 419 6.93E-19 T 13-10-2018 COP00_04875 54519ba99bac4b01fddaea78aaacf78a 421 SUPERFAMILY SSF52374 49 339 2.95E-82 T 13-10-2018 COP00_04875 54519ba99bac4b01fddaea78aaacf78a 421 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 239 251 5.7E-24 T 13-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 COP00_04875 54519ba99bac4b01fddaea78aaacf78a 421 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 74 96 5.7E-24 T 13-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 COP00_04875 54519ba99bac4b01fddaea78aaacf78a 421 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 189 204 5.7E-24 T 13-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 COP00_04875 54519ba99bac4b01fddaea78aaacf78a 421 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 206 228 5.7E-24 T 13-10-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 COP00_04875 54519ba99bac4b01fddaea78aaacf78a 421 Hamap MF_02007 Tyrosine--tRNA ligase [tyrS]. 26 420 44.735 T 13-10-2018 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 GO:0004831 KEGG: 00970+6.1.1.1 COP00_04170 c8df66ebc2f45d5120c8c1a7c2af24e0 494 Gene3D G3DSA:3.50.80.20 104 194 2.0E-24 T 13-10-2018 COP00_04170 c8df66ebc2f45d5120c8c1a7c2af24e0 494 Gene3D G3DSA:3.40.710.10 285 493 1.2E-55 T 13-10-2018 COP00_04170 c8df66ebc2f45d5120c8c1a7c2af24e0 494 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 311 333 2.9E-30 T 13-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 COP00_04170 c8df66ebc2f45d5120c8c1a7c2af24e0 494 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 450 463 2.9E-30 T 13-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 COP00_04170 c8df66ebc2f45d5120c8c1a7c2af24e0 494 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 80 99 2.9E-30 T 13-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 COP00_04170 c8df66ebc2f45d5120c8c1a7c2af24e0 494 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 383 397 2.9E-30 T 13-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 COP00_04170 c8df66ebc2f45d5120c8c1a7c2af24e0 494 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 368 382 2.9E-30 T 13-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 COP00_04170 c8df66ebc2f45d5120c8c1a7c2af24e0 494 TIGRFAM TIGR00666 PBP4: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 67 472 1.2E-140 T 13-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 COP00_04170 c8df66ebc2f45d5120c8c1a7c2af24e0 494 Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family 39 492 3.7E-151 T 13-10-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 COP00_04170 c8df66ebc2f45d5120c8c1a7c2af24e0 494 SUPERFAMILY SSF56601 40 492 5.23E-97 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like COP00_14460 e2a39b1b7a870fc75e21784a9d87abd9 287 Gene3D G3DSA:3.90.550.10 7 277 3.0E-79 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases COP00_14460 e2a39b1b7a870fc75e21784a9d87abd9 287 SUPERFAMILY SSF53448 7 273 1.91E-67 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases COP00_14460 e2a39b1b7a870fc75e21784a9d87abd9 287 Pfam PF01501 Glycosyl transferase family 8 8 257 3.1E-60 T 13-10-2018 IPR002495 Glycosyl transferase, family 8 GO:0016757 COP00_06800 d6a8087b2dee50a58e2e3651b7ba0e81 97 PIRSF PIRSF029928 1 97 7.4E-35 T 13-10-2018 IPR016940 ComG operon protein C GO:0030420 COP00_06800 d6a8087b2dee50a58e2e3651b7ba0e81 97 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 26 8.6E-9 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site COP00_06800 d6a8087b2dee50a58e2e3651b7ba0e81 97 SUPERFAMILY SSF54523 6 85 2.12E-13 T 13-10-2018 COP00_06800 d6a8087b2dee50a58e2e3651b7ba0e81 97 Pfam PF07963 Prokaryotic N-terminal methylation motif 2 25 2.1E-8 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site COP00_06800 d6a8087b2dee50a58e2e3651b7ba0e81 97 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 4 24 - T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site COP00_06800 d6a8087b2dee50a58e2e3651b7ba0e81 97 Gene3D G3DSA:3.30.700.10 6 97 4.5E-10 T 13-10-2018 COP00_06800 d6a8087b2dee50a58e2e3651b7ba0e81 97 PRINTS PR00813 Bacterial general secretion pathway protein G signature 41 59 4.8E-8 T 13-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 COP00_06800 d6a8087b2dee50a58e2e3651b7ba0e81 97 PRINTS PR00813 Bacterial general secretion pathway protein G signature 5 30 4.8E-8 T 13-10-2018 IPR000983 Bacterial general secretion pathway protein G-type pilin GO:0008565|GO:0015627|GO:0015628 COP00_05610 59c65a18625ab9b9655efab53f4362ce 428 Gene3D G3DSA:3.65.10.10 19 227 9.6E-154 T 13-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 COP00_05610 59c65a18625ab9b9655efab53f4362ce 428 PIRSF PIRSF000505 1 428 1.2E-116 T 13-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 COP00_05610 59c65a18625ab9b9655efab53f4362ce 428 ProSitePatterns PS00104 EPSP synthase signature 1. 85 99 - T 13-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 COP00_05610 59c65a18625ab9b9655efab53f4362ce 428 SUPERFAMILY SSF55205 5 424 3.92E-132 T 13-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 COP00_05610 59c65a18625ab9b9655efab53f4362ce 428 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 11 426 1.8E-131 T 13-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 COP00_05610 59c65a18625ab9b9655efab53f4362ce 428 ProSitePatterns PS00885 EPSP synthase signature 2. 337 355 - T 13-10-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 COP00_05610 59c65a18625ab9b9655efab53f4362ce 428 Gene3D G3DSA:3.65.10.10 9 420 9.6E-154 T 13-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 COP00_05610 59c65a18625ab9b9655efab53f4362ce 428 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 6 420 3.0E-124 T 13-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 COP00_05610 59c65a18625ab9b9655efab53f4362ce 428 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 7 427 34.618 T 13-10-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 COP00_19475 b0325c8a220ca8841fce5523175f7dfb 152 SUPERFAMILY SSF55729 2 150 5.17E-35 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase COP00_19475 b0325c8a220ca8841fce5523175f7dfb 152 Gene3D G3DSA:3.40.630.30 5 152 5.1E-45 T 13-10-2018 COP00_19475 b0325c8a220ca8841fce5523175f7dfb 152 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 14 145 4.6E-44 T 13-10-2018 IPR006464 N-acetyltransferase RimI/Ard1 GO:0006474|GO:0016407 COP00_19475 b0325c8a220ca8841fce5523175f7dfb 152 Pfam PF00583 Acetyltransferase (GNAT) family 16 125 3.7E-19 T 13-10-2018 IPR000182 GNAT domain COP00_11525 c7c94a4daa326486926e240dfe20a552 390 Gene3D G3DSA:3.40.50.2000 5 376 8.1E-108 T 13-10-2018 COP00_11525 c7c94a4daa326486926e240dfe20a552 390 Gene3D G3DSA:3.40.50.2000 201 365 8.1E-108 T 13-10-2018 COP00_11525 c7c94a4daa326486926e240dfe20a552 390 SUPERFAMILY SSF53756 1 380 2.2E-73 T 13-10-2018 COP00_11525 c7c94a4daa326486926e240dfe20a552 390 TIGRFAM TIGR01426 MGT: glycosyltransferase, MGT family 7 380 1.7E-97 T 13-10-2018 IPR006326 UDP-glycosyltransferase, MGT GO:0016758|GO:0016999 COP00_11525 c7c94a4daa326486926e240dfe20a552 390 Pfam PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 217 358 4.1E-17 T 13-10-2018 IPR002213 UDP-glucuronosyl/UDP-glucosyltransferase GO:0016758 Reactome: R-HSA-156588 COP00_19290 3ea9eeae06ba754edca99c90c3ba07c1 456 Pfam PF00324 Amino acid permease 21 451 1.0E-111 T 13-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 COP00_19290 3ea9eeae06ba754edca99c90c3ba07c1 456 PIRSF PIRSF006060 2 455 1.5E-71 T 13-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 COP00_19290 3ea9eeae06ba754edca99c90c3ba07c1 456 ProSitePatterns PS00218 Amino acid permeases signature. 46 76 - T 13-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 COP00_19290 3ea9eeae06ba754edca99c90c3ba07c1 456 Gene3D G3DSA:1.20.1740.10 13 456 1.7E-60 T 13-10-2018 COP00_08370 99e58bb2d70bee78003c7bd59a7b55f2 384 SUPERFAMILY SSF54106 2 48 3.27E-10 T 13-10-2018 COP00_08370 99e58bb2d70bee78003c7bd59a7b55f2 384 Gene3D G3DSA:3.10.350.10 1 60 7.3E-14 T 13-10-2018 IPR036779 LysM domain superfamily COP00_08370 99e58bb2d70bee78003c7bd59a7b55f2 384 SMART SM00257 3 48 2.4E-15 T 13-10-2018 IPR018392 LysM domain COP00_08370 99e58bb2d70bee78003c7bd59a7b55f2 384 TIGRFAM TIGR02899 spore_safA: spore coat assembly protein SafA 6 49 6.6E-23 T 13-10-2018 IPR014248 Spore coat assembly protein SafA COP00_08370 99e58bb2d70bee78003c7bd59a7b55f2 384 Pfam PF01476 LysM domain 4 48 2.1E-13 T 13-10-2018 IPR018392 LysM domain COP00_11495 d1dad21c90c332fa9f5c5336e5237469 129 Pfam PF07100 Anabaena sensory rhodopsin transducer 3 118 6.0E-49 T 13-10-2018 IPR009794 Protein of unknown function DUF1362 COP00_11495 d1dad21c90c332fa9f5c5336e5237469 129 Gene3D G3DSA:2.60.290.11 1 125 2.2E-46 T 13-10-2018 IPR036698 TM1070-like superfamily COP00_11495 d1dad21c90c332fa9f5c5336e5237469 129 PIRSF PIRSF008711 1 120 1.5E-37 T 13-10-2018 IPR009794 Protein of unknown function DUF1362 COP00_11495 d1dad21c90c332fa9f5c5336e5237469 129 SUPERFAMILY SSF89232 1 118 1.24E-46 T 13-10-2018 IPR036698 TM1070-like superfamily COP00_14670 18cc10f0512c7b062aa05fb566d2f215 66 Pfam PF13396 Phospholipase_D-nuclease N-terminal 20 61 9.0E-9 T 13-10-2018 IPR027379 Cardiolipin synthase N-terminal COP00_06520 cb93a42e6fe2f164e4f350b1083fb2e6 303 TIGRFAM TIGR02706 P_butyryltrans: phosphate butyryltransferase 4 296 2.6E-131 T 13-10-2018 IPR014079 Phosphate butyryltransferase GO:0016740|GO:0019605|GO:0050182 KEGG: 00650+2.3.1.19 COP00_06520 cb93a42e6fe2f164e4f350b1083fb2e6 303 SUPERFAMILY SSF53659 3 296 7.81E-66 T 13-10-2018 COP00_06520 cb93a42e6fe2f164e4f350b1083fb2e6 303 PIRSF PIRSF000428 1 300 3.2E-86 T 13-10-2018 IPR012147 Phosphate acetyl/butyryltransferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 COP00_06520 cb93a42e6fe2f164e4f350b1083fb2e6 303 Pfam PF01515 Phosphate acetyl/butaryl transferase 6 76 8.8E-7 T 13-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 COP00_06520 cb93a42e6fe2f164e4f350b1083fb2e6 303 Pfam PF01515 Phosphate acetyl/butaryl transferase 77 292 3.5E-49 T 13-10-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 COP00_06520 cb93a42e6fe2f164e4f350b1083fb2e6 303 Gene3D G3DSA:3.40.718.10 1 297 1.1E-105 T 13-10-2018 COP00_02715 37c125e1db05ff72795f84f5f8925485 90 Pfam PF09467 Hypothetical protein Yopt 6 72 6.2E-9 T 13-10-2018 IPR018572 Protein of unknown function YopT COP00_02715 37c125e1db05ff72795f84f5f8925485 90 Gene3D G3DSA:3.10.20.330 3 80 8.0E-35 T 13-10-2018 IPR038082 YopT domain superfamily COP00_02715 37c125e1db05ff72795f84f5f8925485 90 SUPERFAMILY SSF159222 6 72 1.2E-9 T 13-10-2018 COP00_22670 f33f884ad042891491160caca04ecee9 68 Pfam PF10676 Spore germination protein gerPA/gerPF 6 67 9.9E-17 T 13-10-2018 IPR019618 Spore germination protein GerPA/GerPF COP00_07095 ed168e7621d7192d1798b5eebae9cf16 260 Pfam PF00005 ABC transporter 22 169 2.0E-31 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 COP00_07095 ed168e7621d7192d1798b5eebae9cf16 260 SMART SM00382 30 226 1.3E-14 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_07095 ed168e7621d7192d1798b5eebae9cf16 260 SUPERFAMILY SSF52540 3 228 1.31E-58 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_07095 ed168e7621d7192d1798b5eebae9cf16 260 Gene3D G3DSA:3.40.50.300 1 252 4.4E-67 T 13-10-2018 COP00_00700 c1d12c915bbeb6d0a9fb5425b795bf1b 207 Gene3D G3DSA:1.20.120.80 21 206 3.0E-51 T 13-10-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 COP00_00700 c1d12c915bbeb6d0a9fb5425b795bf1b 207 Pfam PF00510 Cytochrome c oxidase subunit III 28 204 1.5E-18 T 13-10-2018 IPR000298 Cytochrome c oxidase subunit III-like GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 COP00_00700 c1d12c915bbeb6d0a9fb5425b795bf1b 207 SUPERFAMILY SSF81452 21 204 2.22E-55 T 13-10-2018 IPR035973 Cytochrome c oxidase subunit III-like superfamily GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 COP00_13870 50f6a71b5d845e1261787ed19ed5d38a 186 Hamap MF_01521 Probable manganese efflux pump MntP [mntP]. 8 186 20.91 T 13-10-2018 IPR022929 Putative manganese efflux pump MntP COP00_13870 50f6a71b5d845e1261787ed19ed5d38a 186 Pfam PF02659 Putative manganese efflux pump 36 183 2.6E-39 T 13-10-2018 IPR003810 Putative manganese efflux pump COP00_02135 21322489adcb2d2a96a8f7fdde019f3b 253 Gene3D G3DSA:3.40.630.40 1 174 7.4E-55 T 13-10-2018 COP00_02135 21322489adcb2d2a96a8f7fdde019f3b 253 SUPERFAMILY SSF110997 183 250 1.19E-15 T 13-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 COP00_02135 21322489adcb2d2a96a8f7fdde019f3b 253 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 4 172 1.9E-43 T 13-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 COP00_02135 21322489adcb2d2a96a8f7fdde019f3b 253 SUPERFAMILY SSF53187 1 177 2.51E-52 T 13-10-2018 COP00_02135 21322489adcb2d2a96a8f7fdde019f3b 253 SMART SM00646 64 172 8.1E-45 T 13-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 COP00_02135 21322489adcb2d2a96a8f7fdde019f3b 253 Pfam PF05036 Sporulation related domain 183 251 6.8E-17 T 13-10-2018 IPR007730 Sporulation-like domain GO:0042834 COP00_02135 21322489adcb2d2a96a8f7fdde019f3b 253 Gene3D G3DSA:3.30.70.1070 183 253 2.2E-26 T 13-10-2018 IPR036680 Sporulation-like domain superfamily GO:0042834 COP00_06245 4f60310225aa1768db5529eb3d7447ef 296 ProSitePatterns PS00146 Beta-lactamase class-A active site. 75 90 - T 13-10-2018 IPR023650 Beta-lactamase, class-A active site KEGG: 00311+3.5.2.6 COP00_06245 4f60310225aa1768db5529eb3d7447ef 296 Pfam PF13354 Beta-lactamase enzyme family 63 268 3.8E-37 T 13-10-2018 COP00_06245 4f60310225aa1768db5529eb3d7447ef 296 SUPERFAMILY SSF56601 40 295 1.67E-76 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like COP00_06245 4f60310225aa1768db5529eb3d7447ef 296 Gene3D G3DSA:3.40.710.10 28 295 5.9E-79 T 13-10-2018 COP00_06245 4f60310225aa1768db5529eb3d7447ef 296 PRINTS PR00118 Beta-lactamase class A signature 149 173 5.8E-67 T 13-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 COP00_06245 4f60310225aa1768db5529eb3d7447ef 296 PRINTS PR00118 Beta-lactamase class A signature 42 66 5.8E-67 T 13-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 COP00_06245 4f60310225aa1768db5529eb3d7447ef 296 PRINTS PR00118 Beta-lactamase class A signature 175 200 5.8E-67 T 13-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 COP00_06245 4f60310225aa1768db5529eb3d7447ef 296 PRINTS PR00118 Beta-lactamase class A signature 113 138 5.8E-67 T 13-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 COP00_06245 4f60310225aa1768db5529eb3d7447ef 296 PRINTS PR00118 Beta-lactamase class A signature 211 226 5.8E-67 T 13-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 COP00_06245 4f60310225aa1768db5529eb3d7447ef 296 PRINTS PR00118 Beta-lactamase class A signature 228 243 5.8E-67 T 13-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 COP00_06245 4f60310225aa1768db5529eb3d7447ef 296 PRINTS PR00118 Beta-lactamase class A signature 73 90 5.8E-67 T 13-10-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 COP00_19295 412ef6f84897420132fd889b81c37d43 388 SUPERFAMILY SSF53448 51 274 1.85E-61 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases COP00_19295 412ef6f84897420132fd889b81c37d43 388 Gene3D G3DSA:3.90.550.10 36 309 8.7E-60 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases COP00_19295 412ef6f84897420132fd889b81c37d43 388 Pfam PF00535 Glycosyl transferase family 2 54 221 1.0E-37 T 13-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 COP00_04515 70d7fc8be65cb82dd03f250af7e56d9a 311 Pfam PF13280 WYL domain 138 305 1.7E-34 T 13-10-2018 IPR026881 WYL domain COP00_04515 70d7fc8be65cb82dd03f250af7e56d9a 311 PIRSF PIRSF016838 1 311 2.1E-27 T 13-10-2018 IPR028349 Protein PafC COP00_04515 70d7fc8be65cb82dd03f250af7e56d9a 311 SUPERFAMILY SSF46785 3 58 6.72E-9 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_04515 70d7fc8be65cb82dd03f250af7e56d9a 311 Pfam PF08279 HTH domain 5 56 2.9E-13 T 13-10-2018 IPR013196 Helix-turn-helix, type 11 COP00_04515 70d7fc8be65cb82dd03f250af7e56d9a 311 Gene3D G3DSA:1.10.10.10 1 61 6.8E-13 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_08990 26eaf016c784fff15c72cbab842800b8 240 Pfam PF00072 Response regulator receiver domain 4 113 6.5E-24 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 COP00_08990 26eaf016c784fff15c72cbab842800b8 240 Gene3D G3DSA:2.20.25.10 202 239 3.6E-8 T 13-10-2018 COP00_08990 26eaf016c784fff15c72cbab842800b8 240 Gene3D G3DSA:2.40.50.40 132 201 9.9E-13 T 13-10-2018 COP00_08990 26eaf016c784fff15c72cbab842800b8 240 SMART SM00448 2 113 5.5E-26 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 COP00_08990 26eaf016c784fff15c72cbab842800b8 240 Pfam PF04397 LytTr DNA-binding domain 142 237 1.8E-27 T 13-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 COP00_08990 26eaf016c784fff15c72cbab842800b8 240 Gene3D G3DSA:3.40.50.2300 1 131 8.4E-34 T 13-10-2018 COP00_08990 26eaf016c784fff15c72cbab842800b8 240 SMART SM00850 141 238 2.3E-32 T 13-10-2018 IPR007492 LytTR DNA-binding domain GO:0003677 COP00_08990 26eaf016c784fff15c72cbab842800b8 240 SUPERFAMILY SSF52172 1 126 2.85E-31 T 13-10-2018 IPR011006 CheY-like superfamily COP00_09215 06c7a1c7401ead3d16f81f1e9083283c 167 ProSitePatterns PS01265 Tpx family signature. 83 94 - T 13-10-2018 IPR018219 Thiol peroxidase conserved site GO:0016684|GO:0055114 KEGG: 00480+1.11.1.15 COP00_09215 06c7a1c7401ead3d16f81f1e9083283c 167 SUPERFAMILY SSF52833 1 160 6.41E-44 T 13-10-2018 IPR036249 Thioredoxin-like superfamily COP00_09215 06c7a1c7401ead3d16f81f1e9083283c 167 Pfam PF08534 Redoxin 20 159 3.0E-22 T 13-10-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 COP00_09215 06c7a1c7401ead3d16f81f1e9083283c 167 Gene3D G3DSA:3.40.30.10 1 164 1.5E-48 T 13-10-2018 COP00_09215 06c7a1c7401ead3d16f81f1e9083283c 167 Hamap MF_00269 Thiol peroxidase [tpx]. 3 163 38.5 T 13-10-2018 IPR002065 Thiol peroxidase Tpx GO:0008379|GO:0016209|GO:0055114 KEGG: 00480+1.11.1.15 COP00_08515 2eb34a824de22c974d990ced0d353e29 340 Gene3D G3DSA:3.90.1200.10 93 316 5.1E-20 T 13-10-2018 COP00_08515 2eb34a824de22c974d990ced0d353e29 340 Gene3D G3DSA:3.30.200.20 2 89 1.4E-10 T 13-10-2018 COP00_08515 2eb34a824de22c974d990ced0d353e29 340 SUPERFAMILY SSF56112 2 311 2.04E-19 T 13-10-2018 IPR011009 Protein kinase-like domain superfamily COP00_08515 2eb34a824de22c974d990ced0d353e29 340 TIGRFAM TIGR02904 spore_ysxE: spore coat protein YsxE 4 309 2.0E-121 T 13-10-2018 IPR014253 Spore coat protein YsxE COP00_01445 ced4fb1131c8d867e49002f76e0bf501 359 Pfam PF01312 FlhB HrpN YscU SpaS Family 12 352 1.4E-131 T 13-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 COP00_01445 ced4fb1131c8d867e49002f76e0bf501 359 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 13 358 9.2E-134 T 13-10-2018 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 COP00_01445 ced4fb1131c8d867e49002f76e0bf501 359 Gene3D G3DSA:3.40.1690.10 223 359 2.0E-57 T 13-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal COP00_01445 ced4fb1131c8d867e49002f76e0bf501 359 SUPERFAMILY SSF160544 249 356 2.75E-42 T 13-10-2018 IPR029025 Type III secretion system substrate exporter, C-terminal COP00_01445 ced4fb1131c8d867e49002f76e0bf501 359 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 307 328 8.0E-43 T 13-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 COP00_01445 ced4fb1131c8d867e49002f76e0bf501 359 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 15 37 8.0E-43 T 13-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 COP00_01445 ced4fb1131c8d867e49002f76e0bf501 359 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 213 231 8.0E-43 T 13-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 COP00_01445 ced4fb1131c8d867e49002f76e0bf501 359 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 277 292 8.0E-43 T 13-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 COP00_01445 ced4fb1131c8d867e49002f76e0bf501 359 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 233 250 8.0E-43 T 13-10-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 COP00_06775 b3f31365d940ec56ea26356602e58b82 60 Pfam PF14038 YqzE-like protein 2 56 2.7E-27 T 13-10-2018 IPR025622 YqzE-like protein COP00_10535 d18876a727e2cd1ff5f4736cd12f49e0 130 SUPERFAMILY SSF160515 4 126 6.93E-40 T 13-10-2018 COP00_10535 d18876a727e2cd1ff5f4736cd12f49e0 130 PIRSF PIRSF034303 1 129 2.7E-43 T 13-10-2018 IPR012543 Protein of unknown function DUF1694 COP00_10535 d18876a727e2cd1ff5f4736cd12f49e0 130 Pfam PF07997 Protein of unknown function (DUF1694) 4 118 1.3E-38 T 13-10-2018 IPR012543 Protein of unknown function DUF1694 COP00_10535 d18876a727e2cd1ff5f4736cd12f49e0 130 Gene3D G3DSA:3.30.1330.30 1 129 5.7E-46 T 13-10-2018 IPR029064 50S ribosomal protein L30e-like COP00_00485 2712a7972a66a67bc783c27751a6a369 410 Gene3D G3DSA:3.40.1830.10 1 180 3.6E-72 T 13-10-2018 IPR035097 Peptidase M29, N-terminal COP00_00485 2712a7972a66a67bc783c27751a6a369 410 Pfam PF02073 Thermophilic metalloprotease (M29) 5 408 3.1E-182 T 13-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 COP00_00485 2712a7972a66a67bc783c27751a6a369 410 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 324 345 6.7E-81 T 13-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 COP00_00485 2712a7972a66a67bc783c27751a6a369 410 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 80 99 6.7E-81 T 13-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 COP00_00485 2712a7972a66a67bc783c27751a6a369 410 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 363 385 6.7E-81 T 13-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 COP00_00485 2712a7972a66a67bc783c27751a6a369 410 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 389 408 6.7E-81 T 13-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 COP00_00485 2712a7972a66a67bc783c27751a6a369 410 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 15 32 6.7E-81 T 13-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 COP00_00485 2712a7972a66a67bc783c27751a6a369 410 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 301 321 6.7E-81 T 13-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 COP00_00485 2712a7972a66a67bc783c27751a6a369 410 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 156 178 6.7E-81 T 13-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 COP00_00485 2712a7972a66a67bc783c27751a6a369 410 PRINTS PR00919 Thermophilic metalloprotease (M29) signature 245 264 6.7E-81 T 13-10-2018 IPR000787 Peptidase M29 GO:0004177|GO:0006508 COP00_00485 2712a7972a66a67bc783c27751a6a369 410 SUPERFAMILY SSF144052 5 409 2.09E-157 T 13-10-2018 COP00_00760 01031b36e1a6199f81e44b760f8775f3 161 SUPERFAMILY SSF52374 4 157 1.6E-42 T 13-10-2018 COP00_00760 01031b36e1a6199f81e44b760f8775f3 161 Pfam PF01467 Cytidylyltransferase-like 7 134 1.1E-18 T 13-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 COP00_00760 01031b36e1a6199f81e44b760f8775f3 161 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 4 64 3.0E-18 T 13-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 COP00_00760 01031b36e1a6199f81e44b760f8775f3 161 Gene3D G3DSA:3.40.50.620 1 161 1.1E-57 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold COP00_00760 01031b36e1a6199f81e44b760f8775f3 161 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 50 74 1.1E-52 T 13-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 COP00_00760 01031b36e1a6199f81e44b760f8775f3 161 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 86 102 1.1E-52 T 13-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 COP00_00760 01031b36e1a6199f81e44b760f8775f3 161 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 113 135 1.1E-52 T 13-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 COP00_00760 01031b36e1a6199f81e44b760f8775f3 161 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 3 21 1.1E-52 T 13-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 COP00_00760 01031b36e1a6199f81e44b760f8775f3 161 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 21 42 1.1E-52 T 13-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 COP00_00760 01031b36e1a6199f81e44b760f8775f3 161 ProDom PD016147 LIGASE LYASE CITRATE PRO-3S-LYASE SYNTHETASE TRANSFERASE CYTIDYLTRANSFERASE-RELATED:CITRATE ACETATE:SH-CITRATE CITC PLASMID 12 77 0.001 T 13-10-2018 COP00_00760 01031b36e1a6199f81e44b760f8775f3 161 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 4 158 6.1E-63 T 13-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 COP00_00760 01031b36e1a6199f81e44b760f8775f3 161 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 3 159 35.534 T 13-10-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 COP00_21855 d163ce6640d39f9d661853bb1c07f6c1 140 Gene3D G3DSA:1.10.1660.10 2 118 4.4E-23 T 13-10-2018 COP00_21855 d163ce6640d39f9d661853bb1c07f6c1 140 SUPERFAMILY SSF46955 11 108 8.24E-20 T 13-10-2018 IPR009061 Putative DNA-binding domain superfamily COP00_21855 d163ce6640d39f9d661853bb1c07f6c1 140 SMART SM00422 11 79 2.2E-27 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 COP00_21855 d163ce6640d39f9d661853bb1c07f6c1 140 Pfam PF13411 MerR HTH family regulatory protein 11 77 3.2E-17 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 COP00_21855 d163ce6640d39f9d661853bb1c07f6c1 140 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 23 36 1.4E-8 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 COP00_21855 d163ce6640d39f9d661853bb1c07f6c1 140 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 12 23 1.4E-8 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 COP00_21855 d163ce6640d39f9d661853bb1c07f6c1 140 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 46 66 1.4E-8 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 COP00_06595 dbdee3f200610df3d686ec4a834a6920 449 Pfam PF02601 Exonuclease VII, large subunit 125 438 1.6E-101 T 13-10-2018 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 COP00_06595 dbdee3f200610df3d686ec4a834a6920 449 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 4 441 30.19 T 13-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 COP00_06595 dbdee3f200610df3d686ec4a834a6920 449 Pfam PF13742 OB-fold nucleic acid binding domain 8 102 7.9E-31 T 13-10-2018 IPR025824 OB-fold nucleic acid binding domain GO:0003676 COP00_06595 dbdee3f200610df3d686ec4a834a6920 449 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 8 348 3.5E-137 T 13-10-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 COP00_13255 cbd2b086215c006e016eb3585564b82f 427 Gene3D G3DSA:3.30.1490.20 101 178 1.5E-33 T 13-10-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0005524 COP00_13255 cbd2b086215c006e016eb3585564b82f 427 Pfam PF02655 ATP-grasp domain 109 262 1.5E-6 T 13-10-2018 IPR003806 ATP-grasp fold, DUF201-type GO:0005524|GO:0046872 COP00_13255 cbd2b086215c006e016eb3585564b82f 427 Gene3D G3DSA:3.40.50.20 6 100 1.5E-33 T 13-10-2018 COP00_13255 cbd2b086215c006e016eb3585564b82f 427 SUPERFAMILY SSF56059 110 283 8.84E-26 T 13-10-2018 COP00_13255 cbd2b086215c006e016eb3585564b82f 427 Gene3D G3DSA:3.30.470.20 179 275 1.5E-33 T 13-10-2018 COP00_21420 c434b692b4001a416fc3d51642990066 248 Gene3D G3DSA:3.40.50.300 1 237 9.2E-49 T 13-10-2018 COP00_21420 c434b692b4001a416fc3d51642990066 248 Pfam PF00005 ABC transporter 21 156 7.1E-21 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 COP00_21420 c434b692b4001a416fc3d51642990066 248 SMART SM00382 27 204 1.0E-9 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_21420 c434b692b4001a416fc3d51642990066 248 SUPERFAMILY SSF52540 2 216 2.45E-46 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_21550 097c18efbf7462704ea34831688003cd 216 Gene3D G3DSA:1.10.3720.10 4 216 9.4E-48 T 13-10-2018 IPR035906 MetI-like superfamily COP00_21550 097c18efbf7462704ea34831688003cd 216 SUPERFAMILY SSF161098 6 200 7.46E-47 T 13-10-2018 IPR035906 MetI-like superfamily COP00_21550 097c18efbf7462704ea34831688003cd 216 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 30 199 4.8E-18 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 COP00_22440 dc626e176f52a8e12697cc34b29d3870 456 PRINTS PR00344 Bacterial sensor protein C-terminal signature 380 394 6.3E-19 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 COP00_22440 dc626e176f52a8e12697cc34b29d3870 456 PRINTS PR00344 Bacterial sensor protein C-terminal signature 439 452 6.3E-19 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 COP00_22440 dc626e176f52a8e12697cc34b29d3870 456 PRINTS PR00344 Bacterial sensor protein C-terminal signature 415 433 6.3E-19 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 COP00_22440 dc626e176f52a8e12697cc34b29d3870 456 PRINTS PR00344 Bacterial sensor protein C-terminal signature 398 408 6.3E-19 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 COP00_22440 dc626e176f52a8e12697cc34b29d3870 456 Gene3D G3DSA:1.10.287.130 238 298 3.4E-14 T 13-10-2018 COP00_22440 dc626e176f52a8e12697cc34b29d3870 456 SUPERFAMILY SSF47384 218 297 8.44E-17 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 COP00_22440 dc626e176f52a8e12697cc34b29d3870 456 SMART SM00388 232 298 1.7E-15 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 COP00_22440 dc626e176f52a8e12697cc34b29d3870 456 Gene3D G3DSA:3.30.565.10 302 456 3.4E-43 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily COP00_22440 dc626e176f52a8e12697cc34b29d3870 456 SMART SM00304 179 231 4.2E-6 T 13-10-2018 IPR003660 HAMP domain GO:0007165|GO:0016021 COP00_22440 dc626e176f52a8e12697cc34b29d3870 456 Pfam PF00512 His Kinase A (phospho-acceptor) domain 233 296 1.3E-14 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 COP00_22440 dc626e176f52a8e12697cc34b29d3870 456 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 344 453 5.5E-27 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase COP00_22440 dc626e176f52a8e12697cc34b29d3870 456 SUPERFAMILY SSF158472 179 228 2.75E-7 T 13-10-2018 COP00_22440 dc626e176f52a8e12697cc34b29d3870 456 Gene3D G3DSA:1.20.1480.50 143 237 2.4E-12 T 13-10-2018 COP00_22440 dc626e176f52a8e12697cc34b29d3870 456 SMART SM00387 343 455 3.6E-41 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase COP00_22440 dc626e176f52a8e12697cc34b29d3870 456 SUPERFAMILY SSF55874 287 453 2.75E-45 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily COP00_23420 6d646b6c8bf08e99d2ffa41641bba8af 569 Pfam PF03354 Phage Terminase 85 551 3.4E-87 T 13-10-2018 IPR005021 Terminase large subunit, Lambdalikevirus-type COP00_23420 6d646b6c8bf08e99d2ffa41641bba8af 569 Gene3D G3DSA:3.40.50.300 56 259 1.0E-15 T 13-10-2018 COP00_21365 365de00c42ed64310e032070b34d42ea 184 SUPERFAMILY SSF46689 8 74 1.47E-14 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 COP00_21365 365de00c42ed64310e032070b34d42ea 184 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 6.3E-5 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 COP00_21365 365de00c42ed64310e032070b34d42ea 184 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 6.3E-5 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 COP00_21365 365de00c42ed64310e032070b34d42ea 184 Pfam PF00440 Bacterial regulatory proteins, tetR family 21 61 3.7E-10 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 COP00_21365 365de00c42ed64310e032070b34d42ea 184 Gene3D G3DSA:1.10.357.10 6 183 9.8E-36 T 13-10-2018 COP00_14125 55010e0c6c62de70c0d82c4915f96200 283 SUPERFAMILY SSF53213 8 264 1.7E-47 T 13-10-2018 COP00_14125 55010e0c6c62de70c0d82c4915f96200 283 Gene3D G3DSA:3.40.830.10 2 279 4.9E-73 T 13-10-2018 COP00_14125 55010e0c6c62de70c0d82c4915f96200 283 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 6 242 4.2E-30 T 13-10-2018 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 COP00_20335 85222ee6d9b82089932b93e84f3b1ffd 282 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 29 52 2.6E-10 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 COP00_20335 85222ee6d9b82089932b93e84f3b1ffd 282 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 8 21 2.6E-10 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 COP00_20335 85222ee6d9b82089932b93e84f3b1ffd 282 Gene3D G3DSA:1.10.357.10 1 190 1.2E-32 T 13-10-2018 COP00_20335 85222ee6d9b82089932b93e84f3b1ffd 282 ProSitePatterns PS01081 TetR-type HTH domain signature. 20 51 - T 13-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site COP00_20335 85222ee6d9b82089932b93e84f3b1ffd 282 SUPERFAMILY SSF46689 3 78 2.82E-19 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 COP00_20335 85222ee6d9b82089932b93e84f3b1ffd 282 Pfam PF00440 Bacterial regulatory proteins, tetR family 8 54 7.3E-18 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 COP00_13510 5d03237e1be7182aeeb036784f4884e9 569 Pfam PF01979 Amidohydrolase family 128 455 2.0E-75 T 13-10-2018 IPR006680 Amidohydrolase-related GO:0016787 COP00_13510 5d03237e1be7182aeeb036784f4884e9 569 SUPERFAMILY SSF51556 132 569 1.66E-189 T 13-10-2018 IPR032466 Metal-dependent hydrolase COP00_13510 5d03237e1be7182aeeb036784f4884e9 569 ProSitePatterns PS00145 Urease active site. 320 336 - T 13-10-2018 IPR017950 Urease active site GO:0009039 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 COP00_13510 5d03237e1be7182aeeb036784f4884e9 569 Gene3D G3DSA:3.20.20.140 132 550 1.3E-292 T 13-10-2018 COP00_13510 5d03237e1be7182aeeb036784f4884e9 569 Pfam PF00449 Urease alpha-subunit, N-terminal domain 2 122 1.4E-56 T 13-10-2018 IPR011612 Urease alpha-subunit, N-terminal domain KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 COP00_13510 5d03237e1be7182aeeb036784f4884e9 569 ProSitePatterns PS01120 Urease nickel ligands signature. 130 143 - T 13-10-2018 IPR029754 Urease nickel binding site GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 COP00_13510 5d03237e1be7182aeeb036784f4884e9 569 TIGRFAM TIGR01792 urease_alph: urease, alpha subunit 2 569 6.9E-293 T 13-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 COP00_13510 5d03237e1be7182aeeb036784f4884e9 569 SUPERFAMILY SSF51338 2 180 3.87E-65 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 COP00_13510 5d03237e1be7182aeeb036784f4884e9 569 SUPERFAMILY SSF51338 420 479 2.07E-5 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 COP00_13510 5d03237e1be7182aeeb036784f4884e9 569 Hamap MF_01953 Urease subunit alpha [ureC]. 1 569 57.098 T 13-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 COP00_13510 5d03237e1be7182aeeb036784f4884e9 569 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 429 442 8.0E-32 T 13-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 COP00_13510 5d03237e1be7182aeeb036784f4884e9 569 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 403 418 8.0E-32 T 13-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 COP00_13510 5d03237e1be7182aeeb036784f4884e9 569 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 298 315 8.0E-32 T 13-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 COP00_13510 5d03237e1be7182aeeb036784f4884e9 569 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 337 353 8.0E-32 T 13-10-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 COP00_13510 5d03237e1be7182aeeb036784f4884e9 569 Gene3D G3DSA:2.30.40.10 2 482 1.3E-292 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 COP00_13785 b05b0dc8b6e683eba8c38f73f64e466a 246 Gene3D G3DSA:3.30.2030.10 31 170 2.3E-40 T 13-10-2018 COP00_13785 b05b0dc8b6e683eba8c38f73f64e466a 246 Gene3D G3DSA:3.30.360.40 171 246 4.2E-31 T 13-10-2018 COP00_13785 b05b0dc8b6e683eba8c38f73f64e466a 246 Pfam PF08680 TATA-box binding 48 246 6.8E-55 T 13-10-2018 IPR014794 TATA-box binding COP00_13785 b05b0dc8b6e683eba8c38f73f64e466a 246 SUPERFAMILY SSF143842 34 244 1.57E-64 T 13-10-2018 IPR036209 YwmB-like superfamily COP00_00615 78c6585ed66bdeae5873be47697a20ec 62 Pfam PF17259 Family of unknown function (DUF5325) 1 61 6.1E-28 T 13-10-2018 IPR035211 Protein of unknown function DUF5325 COP00_00615 78c6585ed66bdeae5873be47697a20ec 62 ProDom PD699877 YLAF TRANSMEMBRANE MEMBRANE BH2633 1 56 4.0E-9 T 13-10-2018 IPR035211 Protein of unknown function DUF5325 COP00_19695 95c9bdcdad9318f0944fc64c1031f293 436 TIGRFAM TIGR01537 portal_HK97: phage portal protein, HK97 family 44 381 1.8E-87 T 13-10-2018 IPR006427 Phage portal protein, HK97 COP00_19695 95c9bdcdad9318f0944fc64c1031f293 436 Pfam PF04860 Phage portal protein 53 376 4.5E-88 T 13-10-2018 IPR006944 Bacteriophage/Gene transfer agent portal protein COP00_04805 b1b8bc82e9dd2c2c1b31f51647bcd502 69 Pfam PF10737 Spore germination protein GerPC 2 50 1.0E-6 T 13-10-2018 IPR019673 Spore germination protein GerPC COP00_03720 1b74ec32a969f3e11508555370c2c3b8 231 Gene3D G3DSA:3.40.225.10 1 230 1.8E-63 T 13-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily COP00_03720 1b74ec32a969f3e11508555370c2c3b8 231 SMART SM01007 7 197 4.6E-71 T 13-10-2018 IPR001303 Class II aldolase/adducin N-terminal COP00_03720 1b74ec32a969f3e11508555370c2c3b8 231 SUPERFAMILY SSF53639 2 222 1.55E-72 T 13-10-2018 IPR036409 Class II aldolase/adducin N-terminal domain superfamily COP00_03720 1b74ec32a969f3e11508555370c2c3b8 231 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 8 196 2.3E-48 T 13-10-2018 IPR001303 Class II aldolase/adducin N-terminal COP00_15280 f9054977873d0b7690037ee3410c46dc 300 Pfam PF01261 Xylose isomerase-like TIM barrel 40 246 8.6E-25 T 13-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain COP00_15280 f9054977873d0b7690037ee3410c46dc 300 TIGRFAM TIGR04379 myo_inos_iolE: myo-inosose-2 dehydratase 6 292 1.6E-120 T 13-10-2018 IPR030823 IolE/MocC family KEGG: 00562+4.2.1.44 COP00_15280 f9054977873d0b7690037ee3410c46dc 300 Gene3D G3DSA:3.20.20.150 1 295 7.6E-81 T 13-10-2018 COP00_15280 f9054977873d0b7690037ee3410c46dc 300 SUPERFAMILY SSF51658 7 292 2.07E-54 T 13-10-2018 IPR036237 Xylose isomerase-like superfamily COP00_15280 f9054977873d0b7690037ee3410c46dc 300 Hamap MF_01672 Inosose dehydratase [iolE]. 1 295 56.81 T 13-10-2018 IPR023952 Inosose dehydratase GO:0019310|GO:0030145|GO:0050114 KEGG: 00562+4.2.1.44 COP00_23445 b3c5cd33e7b4ad7799d0401717dc0a61 116 Pfam PF05135 Phage gp6-like head-tail connector protein 1 85 1.7E-15 T 13-10-2018 IPR021146 Phage gp6-like head-tail connector protein COP00_23445 b3c5cd33e7b4ad7799d0401717dc0a61 116 TIGRFAM TIGR01560 put_DNA_pack: uncharacterized phage protein (possible DNA packaging) 5 86 1.2E-18 T 13-10-2018 IPR006450 Phage protein of unkonwn function COP00_23445 b3c5cd33e7b4ad7799d0401717dc0a61 116 Gene3D G3DSA:1.10.3230.30 1 97 1.6E-5 T 13-10-2018 COP00_20865 d10e19fda93221e00d996742a55ef7e6 263 Pfam PF14167 YfkD-like protein 32 263 8.8E-118 T 13-10-2018 IPR025548 YfkD-like protein COP00_02290 c5e53e1e827d568ba74c9f5f60a1b7ed 138 TIGRFAM TIGR01760 tape_meas_TP901: phage tail tape measure protein, TP901 family, core region 3 133 7.0E-31 T 13-10-2018 IPR010090 Phage tail tape measure protein COP00_02290 c5e53e1e827d568ba74c9f5f60a1b7ed 138 Pfam PF10145 Phage-related minor tail protein 3 117 3.7E-19 T 13-10-2018 IPR010090 Phage tail tape measure protein COP00_09620 e9b00b352088ddc029fc12777acb1254 134 SUPERFAMILY SSF54593 12 130 8.59E-21 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase COP00_09620 e9b00b352088ddc029fc12777acb1254 134 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 13 126 4.1E-8 T 13-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain COP00_09620 e9b00b352088ddc029fc12777acb1254 134 Gene3D G3DSA:3.10.180.10 1 134 4.1E-51 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase COP00_10540 03c236f384628b55fb37d82c4d610228 82 ProDom PD060056 YUEH 1 82 4.0E-24 T 13-10-2018 IPR020260 Uncharacterised protein family YueH COP00_10540 03c236f384628b55fb37d82c4d610228 82 Pfam PF14166 YueH-like protein 2 81 2.3E-27 T 13-10-2018 IPR020260 Uncharacterised protein family YueH COP00_11380 c8e81718a59d32e5d13a4d4ce6c706e2 231 Pfam PF13462 Thioredoxin 46 222 3.6E-39 T 13-10-2018 IPR012336 Thioredoxin-like fold COP00_11380 c8e81718a59d32e5d13a4d4ce6c706e2 231 Gene3D G3DSA:3.40.30.10 29 231 3.0E-56 T 13-10-2018 COP00_11380 c8e81718a59d32e5d13a4d4ce6c706e2 231 SUPERFAMILY SSF52833 40 221 6.03E-38 T 13-10-2018 IPR036249 Thioredoxin-like superfamily COP00_13645 fa0e64a0da076763b1e89f72aeef8445 287 Pfam PF01551 Peptidase family M23 118 216 1.4E-24 T 13-10-2018 IPR016047 Peptidase M23 COP00_13645 fa0e64a0da076763b1e89f72aeef8445 287 SUPERFAMILY SSF51261 112 220 2.67E-26 T 13-10-2018 IPR011055 Duplicated hybrid motif COP00_13645 fa0e64a0da076763b1e89f72aeef8445 287 Gene3D G3DSA:2.70.70.10 75 232 5.4E-55 T 13-10-2018 IPR011055 Duplicated hybrid motif COP00_11695 6980a511848cd82759334f78ee942804 436 TIGRFAM TIGR01537 portal_HK97: phage portal protein, HK97 family 44 381 4.7E-87 T 13-10-2018 IPR006427 Phage portal protein, HK97 COP00_11695 6980a511848cd82759334f78ee942804 436 Pfam PF04860 Phage portal protein 53 376 2.8E-87 T 13-10-2018 IPR006944 Bacteriophage/Gene transfer agent portal protein COP00_20155 92b5911f81bcab5c0b3ba876ced2c335 740 Gene3D G3DSA:3.10.620.30 386 579 4.1E-25 T 13-10-2018 COP00_20155 92b5911f81bcab5c0b3ba876ced2c335 740 SUPERFAMILY SSF54001 411 557 1.77E-45 T 13-10-2018 IPR038765 Papain-like cysteine peptidase superfamily COP00_20155 92b5911f81bcab5c0b3ba876ced2c335 740 SMART SM00460 475 551 4.7E-21 T 13-10-2018 IPR002931 Transglutaminase-like COP00_20155 92b5911f81bcab5c0b3ba876ced2c335 740 Pfam PF13559 Domain of unknown function (DUF4129) 668 734 2.3E-6 T 13-10-2018 IPR025403 Domain of unknown function DUF4129 COP00_20155 92b5911f81bcab5c0b3ba876ced2c335 740 Pfam PF01841 Transglutaminase-like superfamily 426 549 2.3E-26 T 13-10-2018 IPR002931 Transglutaminase-like COP00_05895 7807222aad43bad9edcbde3468a9fca8 233 SMART SM00862 156 228 1.4E-27 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 COP00_05895 7807222aad43bad9edcbde3468a9fca8 233 Pfam PF00072 Response regulator receiver domain 6 115 8.5E-25 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 COP00_05895 7807222aad43bad9edcbde3468a9fca8 233 Gene3D G3DSA:1.10.10.10 123 233 2.5E-33 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_05895 7807222aad43bad9edcbde3468a9fca8 233 Gene3D G3DSA:3.40.50.2300 1 122 9.7E-35 T 13-10-2018 COP00_05895 7807222aad43bad9edcbde3468a9fca8 233 Pfam PF00486 Transcriptional regulatory protein, C terminal 158 228 1.8E-25 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 COP00_05895 7807222aad43bad9edcbde3468a9fca8 233 SMART SM00448 4 114 8.2E-41 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 COP00_05895 7807222aad43bad9edcbde3468a9fca8 233 SUPERFAMILY SSF46894 132 229 3.25E-30 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 COP00_05895 7807222aad43bad9edcbde3468a9fca8 233 SUPERFAMILY SSF52172 2 130 2.85E-39 T 13-10-2018 IPR011006 CheY-like superfamily COP00_20595 5f6c7fa6779329605ecc5b27c26094c9 124 SUPERFAMILY SSF140688 2 113 1.12E-50 T 13-10-2018 IPR038074 YfmB domain superfamily COP00_20595 5f6c7fa6779329605ecc5b27c26094c9 124 Pfam PF11486 Protein of unknown function (DUF3212) 2 119 5.3E-56 T 13-10-2018 IPR021579 Protein of unknown function DUF3212 COP00_20595 5f6c7fa6779329605ecc5b27c26094c9 124 Gene3D G3DSA:1.10.8.570 1 113 3.3E-54 T 13-10-2018 IPR038074 YfmB domain superfamily COP00_14305 4647ff6a50c480b95e5b850bd91a49f9 619 Gene3D G3DSA:1.20.1560.10 5 321 8.7E-21 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 COP00_14305 4647ff6a50c480b95e5b850bd91a49f9 619 ProSitePatterns PS00211 ABC transporters family signature. 509 523 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 COP00_14305 4647ff6a50c480b95e5b850bd91a49f9 619 Gene3D G3DSA:3.40.50.300 353 618 5.5E-82 T 13-10-2018 COP00_14305 4647ff6a50c480b95e5b850bd91a49f9 619 SMART SM00382 393 583 8.4E-18 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_14305 4647ff6a50c480b95e5b850bd91a49f9 619 SUPERFAMILY SSF52540 357 607 2.66E-74 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_14305 4647ff6a50c480b95e5b850bd91a49f9 619 SUPERFAMILY SSF90123 28 318 2.49E-26 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 COP00_14305 4647ff6a50c480b95e5b850bd91a49f9 619 Pfam PF00005 ABC transporter 384 536 4.3E-32 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 COP00_18105 d841f174c575e86de43eebc1390db9d7 185 Gene3D G3DSA:3.40.50.300 10 183 6.8E-48 T 13-10-2018 COP00_18105 d841f174c575e86de43eebc1390db9d7 185 PRINTS PR01100 Shikimate kinase family signature 66 74 3.5E-16 T 13-10-2018 COP00_18105 d841f174c575e86de43eebc1390db9d7 185 PRINTS PR01100 Shikimate kinase family signature 14 29 3.5E-16 T 13-10-2018 COP00_18105 d841f174c575e86de43eebc1390db9d7 185 PRINTS PR01100 Shikimate kinase family signature 38 51 3.5E-16 T 13-10-2018 COP00_18105 d841f174c575e86de43eebc1390db9d7 185 PRINTS PR01100 Shikimate kinase family signature 85 94 3.5E-16 T 13-10-2018 COP00_18105 d841f174c575e86de43eebc1390db9d7 185 PRINTS PR01100 Shikimate kinase family signature 106 123 3.5E-16 T 13-10-2018 COP00_18105 d841f174c575e86de43eebc1390db9d7 185 Pfam PF01202 Shikimate kinase 20 176 1.4E-42 T 13-10-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 COP00_18105 d841f174c575e86de43eebc1390db9d7 185 Hamap MF_00109 Shikimate kinase [aroK]. 11 177 24.775 T 13-10-2018 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 COP00_18105 d841f174c575e86de43eebc1390db9d7 185 ProSitePatterns PS01128 Shikimate kinase signature. 67 93 - T 13-10-2018 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 COP00_18105 d841f174c575e86de43eebc1390db9d7 185 SUPERFAMILY SSF52540 12 173 7.78E-25 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_01715 bdf3df1b79cc8b1bbc73c02c31ab6b02 304 Pfam PF13464 Domain of unknown function (DUF4115) 219 280 1.3E-14 T 13-10-2018 IPR025194 Domain of unknown function DUF4115 COP00_01715 bdf3df1b79cc8b1bbc73c02c31ab6b02 304 SUPERFAMILY SSF47413 4 78 6.52E-9 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 COP00_01715 bdf3df1b79cc8b1bbc73c02c31ab6b02 304 Gene3D G3DSA:1.10.260.40 3 101 1.6E-31 T 13-10-2018 COP00_01715 bdf3df1b79cc8b1bbc73c02c31ab6b02 304 Pfam PF13413 Helix-turn-helix domain 10 71 4.8E-23 T 13-10-2018 COP00_01715 bdf3df1b79cc8b1bbc73c02c31ab6b02 304 SMART SM00530 10 71 1.5E-4 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 COP00_23850 b34617979bab4255dea1253764a0ba6b 439 Gene3D G3DSA:2.30.42.10 332 438 3.7E-25 T 13-10-2018 COP00_23850 b34617979bab4255dea1253764a0ba6b 439 SMART SM00228 351 422 8.7E-15 T 13-10-2018 IPR001478 PDZ domain GO:0005515 COP00_23850 b34617979bab4255dea1253764a0ba6b 439 SUPERFAMILY SSF50494 97 323 3.43E-58 T 13-10-2018 IPR009003 Peptidase S1, PA clan COP00_23850 b34617979bab4255dea1253764a0ba6b 439 PRINTS PR00834 HtrA/DegQ protease family signature 162 174 2.5E-40 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 COP00_23850 b34617979bab4255dea1253764a0ba6b 439 PRINTS PR00834 HtrA/DegQ protease family signature 224 248 2.5E-40 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 COP00_23850 b34617979bab4255dea1253764a0ba6b 439 PRINTS PR00834 HtrA/DegQ protease family signature 265 282 2.5E-40 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 COP00_23850 b34617979bab4255dea1253764a0ba6b 439 PRINTS PR00834 HtrA/DegQ protease family signature 183 203 2.5E-40 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 COP00_23850 b34617979bab4255dea1253764a0ba6b 439 PRINTS PR00834 HtrA/DegQ protease family signature 287 304 2.5E-40 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 COP00_23850 b34617979bab4255dea1253764a0ba6b 439 PRINTS PR00834 HtrA/DegQ protease family signature 379 391 2.5E-40 T 13-10-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 COP00_23850 b34617979bab4255dea1253764a0ba6b 439 SUPERFAMILY SSF50156 316 431 7.49E-22 T 13-10-2018 IPR036034 PDZ superfamily GO:0005515 COP00_23850 b34617979bab4255dea1253764a0ba6b 439 Gene3D G3DSA:2.40.10.10 65 211 2.7E-26 T 13-10-2018 COP00_23850 b34617979bab4255dea1253764a0ba6b 439 Pfam PF13180 PDZ domain 352 431 3.0E-20 T 13-10-2018 IPR001478 PDZ domain GO:0005515 COP00_23850 b34617979bab4255dea1253764a0ba6b 439 Pfam PF13365 Trypsin-like peptidase domain 150 294 3.0E-31 T 13-10-2018 COP00_23850 b34617979bab4255dea1253764a0ba6b 439 Gene3D G3DSA:2.40.10.10 215 331 1.5E-42 T 13-10-2018 COP00_23185 e9da7775f139db3c4e812adb15030bc0 268 PRINTS PR00111 Alpha/beta hydrolase fold signature 210 224 1.2E-11 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 COP00_23185 e9da7775f139db3c4e812adb15030bc0 268 PRINTS PR00111 Alpha/beta hydrolase fold signature 99 112 1.2E-11 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 COP00_23185 e9da7775f139db3c4e812adb15030bc0 268 PRINTS PR00111 Alpha/beta hydrolase fold signature 55 70 1.2E-11 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 COP00_23185 e9da7775f139db3c4e812adb15030bc0 268 Gene3D G3DSA:3.40.50.1820 6 266 6.5E-65 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold COP00_23185 e9da7775f139db3c4e812adb15030bc0 268 Pfam PF00561 alpha/beta hydrolase fold 30 145 2.8E-25 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 COP00_23185 e9da7775f139db3c4e812adb15030bc0 268 Pfam PF08386 TAP-like protein 205 263 7.2E-5 T 13-10-2018 IPR013595 Peptidase S33 tripeptidyl aminopeptidase-like, C-terminal COP00_23185 e9da7775f139db3c4e812adb15030bc0 268 SUPERFAMILY SSF53474 8 265 1.46E-61 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold COP00_10615 57f70e19392cde3d3476448e0f4f2953 412 Gene3D G3DSA:1.10.10.2840 279 411 2.2E-19 T 13-10-2018 COP00_10615 57f70e19392cde3d3476448e0f4f2953 412 Pfam PF13556 PucR C-terminal helix-turn-helix domain 349 406 2.1E-18 T 13-10-2018 IPR025736 PucR C-terminal helix-turn-helix domain COP00_06215 dfed3ea511d5fefede0a232315c8a1a4 79 Pfam PF10827 Protein of unknown function (DUF2552) 1 79 4.8E-44 T 13-10-2018 IPR020157 Uncharacterised protein family YqkC COP00_06215 dfed3ea511d5fefede0a232315c8a1a4 79 ProDom PD058987 CYTOSOLIC YQKC 21 79 7.0E-25 T 13-10-2018 IPR020157 Uncharacterised protein family YqkC COP00_17625 098d5cf85a949220d8c1904d394fd7f4 78 Gene3D G3DSA:3.10.180.10 1 78 3.6E-27 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase COP00_17625 098d5cf85a949220d8c1904d394fd7f4 78 SUPERFAMILY SSF54593 27 74 6.58E-6 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase COP00_04100 fce8bf8f044846315abaacdfc914d9d3 124 SMART SM00345 17 76 4.5E-14 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 COP00_04100 fce8bf8f044846315abaacdfc914d9d3 124 SUPERFAMILY SSF46785 6 80 1.94E-21 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_04100 fce8bf8f044846315abaacdfc914d9d3 124 Gene3D G3DSA:1.10.10.10 10 123 1.7E-26 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_04100 fce8bf8f044846315abaacdfc914d9d3 124 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 76 7.3E-14 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 COP00_04960 b40b9aad1b2e682b0e55fd41e1548fb1 151 SUPERFAMILY SSF49764 64 149 5.23E-9 T 13-10-2018 IPR008978 HSP20-like chaperone COP00_07245 bd63a1b6452e5c6ddf4151e2a5230de1 319 Pfam PF02562 PhoH-like protein 113 316 1.6E-94 T 13-10-2018 IPR003714 PhoH-like protein GO:0005524 COP00_07245 bd63a1b6452e5c6ddf4151e2a5230de1 319 SUPERFAMILY SSF52540 53 278 1.95E-39 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_07245 bd63a1b6452e5c6ddf4151e2a5230de1 319 Gene3D G3DSA:3.40.50.300 110 316 7.9E-75 T 13-10-2018 COP00_05315 4637dc7e52c390add374b3ef143fb336 45 TIGRFAM TIGR03093 SASP_sspL: small, acid-soluble spore protein L 9 44 3.5E-23 T 13-10-2018 IPR017526 Small acid-soluble spore protein, SspL COP00_13115 e9e821de80d0b056873406f6f18d15e9 244 Gene3D G3DSA:3.40.50.2020 136 244 5.9E-17 T 13-10-2018 COP00_13115 e9e821de80d0b056873406f6f18d15e9 244 SUPERFAMILY SSF53271 88 243 1.02E-20 T 13-10-2018 IPR029057 Phosphoribosyltransferase-like COP00_13115 e9e821de80d0b056873406f6f18d15e9 244 Pfam PF00156 Phosphoribosyl transferase domain 184 242 3.0E-6 T 13-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 COP00_13380 651f5ff817c95d78f2f6406a89b76bb8 389 SMART SM00854 61 301 1.4E-88 T 13-10-2018 IPR019079 Capsule synthesis protein, CapA COP00_13380 651f5ff817c95d78f2f6406a89b76bb8 389 Gene3D G3DSA:3.60.21.10 121 339 1.3E-12 T 13-10-2018 IPR029052 Metallo-dependent phosphatase-like COP00_13380 651f5ff817c95d78f2f6406a89b76bb8 389 SUPERFAMILY SSF56300 61 312 9.22E-40 T 13-10-2018 COP00_13380 651f5ff817c95d78f2f6406a89b76bb8 389 Pfam PF09587 Bacterial capsule synthesis protein PGA_cap 62 301 2.8E-73 T 13-10-2018 IPR019079 Capsule synthesis protein, CapA COP00_20045 c4ed6d933fbf442a3feda96d8aaf946f 435 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 209 422 3.8E-25 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 COP00_20045 c4ed6d933fbf442a3feda96d8aaf946f 435 Gene3D G3DSA:1.10.3720.10 171 432 9.2E-60 T 13-10-2018 IPR035906 MetI-like superfamily COP00_20045 c4ed6d933fbf442a3feda96d8aaf946f 435 SUPERFAMILY SSF160964 83 180 7.19E-11 T 13-10-2018 COP00_20045 c4ed6d933fbf442a3feda96d8aaf946f 435 SUPERFAMILY SSF161098 175 421 8.11E-50 T 13-10-2018 IPR035906 MetI-like superfamily COP00_13435 18fc35e8b2980170240fc80a17c79080 254 TIGRFAM TIGR01252 acetolac_decarb: alpha-acetolactate decarboxylase 19 249 2.2E-102 T 13-10-2018 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939 COP00_13435 18fc35e8b2980170240fc80a17c79080 254 Gene3D G3DSA:3.30.1330.80 95 217 1.5E-83 T 13-10-2018 COP00_13435 18fc35e8b2980170240fc80a17c79080 254 Gene3D G3DSA:3.30.1330.80 20 236 1.5E-83 T 13-10-2018 COP00_13435 18fc35e8b2980170240fc80a17c79080 254 PIRSF PIRSF001332 2 250 2.8E-98 T 13-10-2018 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939 COP00_13435 18fc35e8b2980170240fc80a17c79080 254 Pfam PF03306 Alpha-acetolactate decarboxylase 20 237 3.4E-86 T 13-10-2018 IPR005128 Alpha-acetolactate decarboxylase GO:0045151|GO:0047605 KEGG: 00650+4.1.1.5|KEGG: 00660+4.1.1.5|MetaCyc: PWY-5939 COP00_13435 18fc35e8b2980170240fc80a17c79080 254 SUPERFAMILY SSF117856 18 249 6.28E-85 T 13-10-2018 COP00_07105 2828d3e575b0be15a1c3220cb91a3ff0 88 Pfam PF11116 Protein of unknown function (DUF2624) 5 85 1.1E-28 T 13-10-2018 IPR020277 Protein of unknown function DUF2624 COP00_07105 2828d3e575b0be15a1c3220cb91a3ff0 88 ProDom PD060869 YQFT IG BH1387 3 70 2.0E-28 T 13-10-2018 IPR020277 Protein of unknown function DUF2624 COP00_03010 da45e512937b932acb01db01ca984a53 81 SUPERFAMILY SSF52833 5 79 1.39E-14 T 13-10-2018 IPR036249 Thioredoxin-like superfamily COP00_03010 da45e512937b932acb01db01ca984a53 81 Gene3D G3DSA:3.40.30.10 6 79 1.2E-12 T 13-10-2018 COP00_03010 da45e512937b932acb01db01ca984a53 81 Pfam PF13192 Thioredoxin domain 4 57 5.6E-9 T 13-10-2018 IPR012336 Thioredoxin-like fold COP00_18785 8765b033ab3ee8d312d6a8f0336e0736 289 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 174 182 4.8E-9 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_18785 8765b033ab3ee8d312d6a8f0336e0736 289 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 194 213 4.8E-9 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_18785 8765b033ab3ee8d312d6a8f0336e0736 289 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 122 133 4.8E-9 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_18785 8765b033ab3ee8d312d6a8f0336e0736 289 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 55 284 5.9E-62 T 13-10-2018 COP00_18785 8765b033ab3ee8d312d6a8f0336e0736 289 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 181 209 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 COP00_18785 8765b033ab3ee8d312d6a8f0336e0736 289 Gene3D G3DSA:3.40.50.720 2 287 6.1E-88 T 13-10-2018 COP00_18785 8765b033ab3ee8d312d6a8f0336e0736 289 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 232 4.2E-34 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_18785 8765b033ab3ee8d312d6a8f0336e0736 289 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 122 133 4.2E-34 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_18785 8765b033ab3ee8d312d6a8f0336e0736 289 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 249 269 4.2E-34 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_18785 8765b033ab3ee8d312d6a8f0336e0736 289 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 47 64 4.2E-34 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_18785 8765b033ab3ee8d312d6a8f0336e0736 289 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 194 213 4.2E-34 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_18785 8765b033ab3ee8d312d6a8f0336e0736 289 SUPERFAMILY SSF51735 44 284 1.36E-81 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily COP00_20205 f5f9a9671c5ae69c69773c52df14ba72 84 SUPERFAMILY SSF82697 1 80 4.88E-30 T 13-10-2018 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 COP00_20205 f5f9a9671c5ae69c69773c52df14ba72 84 Gene3D G3DSA:3.30.1280.10 1 84 2.1E-38 T 13-10-2018 IPR036604 Phosphoribosylformylglycinamidine synthase subunit PurS-like superfamily KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 COP00_20205 f5f9a9671c5ae69c69773c52df14ba72 84 Hamap MF_01926 Phosphoribosylformylglycinamidine synthase subunit PurS [purS]. 2 78 22.019 T 13-10-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 COP00_20205 f5f9a9671c5ae69c69773c52df14ba72 84 ProDom PD010362 PHOSPHORIBOSYLFORMYLGLYCINAMIDINE PURS SYNTHETASE SYNTHASE COMPONENT SYNTHASE LIGASE FGAM UPF0062 I 9 80 8.0E-35 T 13-10-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 COP00_20205 f5f9a9671c5ae69c69773c52df14ba72 84 TIGRFAM TIGR00302 TIGR00302: phosphoribosylformylglycinamidine synthase, purS protein 2 80 5.9E-38 T 13-10-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 COP00_20205 f5f9a9671c5ae69c69773c52df14ba72 84 Pfam PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase 3 78 6.0E-33 T 13-10-2018 IPR003850 Phosphoribosylformylglycinamidine synthase subunit PurS KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277 COP00_22655 e656862761936f4af38cb4bb5dd2ce91 163 SUPERFAMILY SSF89963 92 163 1.44E-25 T 13-10-2018 IPR036183 YajQ-like superfamily COP00_22655 e656862761936f4af38cb4bb5dd2ce91 163 SUPERFAMILY SSF89963 6 90 2.62E-29 T 13-10-2018 IPR036183 YajQ-like superfamily COP00_22655 e656862761936f4af38cb4bb5dd2ce91 163 Gene3D G3DSA:3.30.70.990 12 101 3.5E-61 T 13-10-2018 IPR035570 UPF0234, N-terminal COP00_22655 e656862761936f4af38cb4bb5dd2ce91 163 Gene3D G3DSA:3.30.70.860 6 163 3.5E-61 T 13-10-2018 IPR035571 UPF0234-like, C-terminal COP00_22655 e656862761936f4af38cb4bb5dd2ce91 163 Pfam PF04461 Protein of unknown function (DUF520) 5 163 6.9E-62 T 13-10-2018 IPR007551 Protein of unknown function DUF520 COP00_22655 e656862761936f4af38cb4bb5dd2ce91 163 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 4 163 26.389 T 13-10-2018 IPR007551 Protein of unknown function DUF520 COP00_13845 2d60482c7a01750c1bb4cd6485c6402d 209 Gene3D G3DSA:3.40.50.2020 1 209 4.0E-84 T 13-10-2018 COP00_13845 2d60482c7a01750c1bb4cd6485c6402d 209 Pfam PF14681 Uracil phosphoribosyltransferase 6 208 5.4E-76 T 13-10-2018 COP00_13845 2d60482c7a01750c1bb4cd6485c6402d 209 SUPERFAMILY SSF53271 4 207 1.57E-73 T 13-10-2018 IPR029057 Phosphoribosyltransferase-like COP00_13845 2d60482c7a01750c1bb4cd6485c6402d 209 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 3 209 5.6E-94 T 13-10-2018 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 COP00_13845 2d60482c7a01750c1bb4cd6485c6402d 209 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 3 209 48.545 T 13-10-2018 IPR034332 Uracil phosphoribosyltransferase, bacterial-type KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 COP00_06795 b1c829ccd4d2ee01ddd994bf422a83b1 147 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 5 26 4.1E-4 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site COP00_06795 b1c829ccd4d2ee01ddd994bf422a83b1 147 PIRSF PIRSF021292 3 147 5.6E-43 T 13-10-2018 IPR016785 ComG operon protein 4 GO:0030420 COP00_06795 b1c829ccd4d2ee01ddd994bf422a83b1 147 Pfam PF07963 Prokaryotic N-terminal methylation motif 3 27 1.1E-4 T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site COP00_06795 b1c829ccd4d2ee01ddd994bf422a83b1 147 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 6 26 - T 13-10-2018 IPR012902 Prokaryotic N-terminal methylation site COP00_06795 b1c829ccd4d2ee01ddd994bf422a83b1 147 SUPERFAMILY SSF54523 8 121 6.67E-5 T 13-10-2018 COP00_14705 6efde47ec748a15c5be1c108ce1e7107 138 SUPERFAMILY SSF46785 5 130 3.59E-36 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_14705 6efde47ec748a15c5be1c108ce1e7107 138 Gene3D G3DSA:1.10.10.10 2 80 3.0E-20 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_14705 6efde47ec748a15c5be1c108ce1e7107 138 Gene3D G3DSA:3.30.1490.190 82 137 1.2E-20 T 13-10-2018 COP00_14705 6efde47ec748a15c5be1c108ce1e7107 138 Pfam PF01475 Ferric uptake regulator family 13 126 4.6E-29 T 13-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 COP00_00875 f8ac41ec4caf6cba251ef02a12488fb1 241 Gene3D G3DSA:3.30.70.1880 85 240 1.5E-20 T 13-10-2018 COP00_00875 f8ac41ec4caf6cba251ef02a12488fb1 241 Pfam PF05949 Bacterial protein of unknown function (DUF881) 86 227 3.2E-32 T 13-10-2018 IPR010273 Protein of unknown function DUF881 COP00_24185 9c3659df24593c29013d9428261d0d31 264 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 186 203 - T 13-10-2018 IPR000540 Flagellar motor protein MotA, conserved site COP00_24185 9c3659df24593c29013d9428261d0d31 264 Pfam PF01618 MotA/TolQ/ExbB proton channel family 102 218 7.4E-27 T 13-10-2018 IPR002898 MotA/TolQ/ExbB proton channel COP00_07400 a8a3e4708bc361acc0282f2d553ff852 187 SUPERFAMILY SSF109604 3 185 1.47E-35 T 13-10-2018 COP00_07400 a8a3e4708bc361acc0282f2d553ff852 187 Gene3D G3DSA:1.10.3210.10 1 186 4.3E-59 T 13-10-2018 COP00_07400 a8a3e4708bc361acc0282f2d553ff852 187 Pfam PF01966 HD domain 18 130 2.1E-17 T 13-10-2018 IPR006674 HD domain COP00_07400 a8a3e4708bc361acc0282f2d553ff852 187 TIGRFAM TIGR00488 TIGR00488: putative HD superfamily hydrolase 10 180 5.8E-68 T 13-10-2018 IPR005249 Conserved hypothetical protein CHP00488 COP00_07400 a8a3e4708bc361acc0282f2d553ff852 187 SMART SM00471 14 141 8.9E-11 T 13-10-2018 IPR003607 HD/PDEase domain COP00_18420 c8e833003201f9bbb0f3be3c71e2d6a3 152 SUPERFAMILY SSF50475 21 115 8.25E-9 T 13-10-2018 COP00_18420 c8e833003201f9bbb0f3be3c71e2d6a3 152 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 21 90 2.1E-5 T 13-10-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 COP00_18420 c8e833003201f9bbb0f3be3c71e2d6a3 152 Gene3D G3DSA:2.30.110.10 16 146 2.7E-5 T 13-10-2018 IPR012349 FMN-binding split barrel GO:0048037 COP00_11215 ada6507be7f3bd99221486aafc7329f0 192 Pfam PF01923 Cobalamin adenosyltransferase 4 166 7.8E-58 T 13-10-2018 IPR016030 Cobalamin adenosyltransferase-like KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 COP00_11215 ada6507be7f3bd99221486aafc7329f0 192 Gene3D G3DSA:1.20.1200.10 12 192 1.0E-64 T 13-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 COP00_11215 ada6507be7f3bd99221486aafc7329f0 192 ProDom PD007457 TRANSFERASE ADENOSYLTRANSFERASE COBALAMIN ATP:COBIALAMIN ADENOSYLTRANSFERASE PDUO TYPE RELATED ACIDURIA YVQK 9 179 1.0E-54 T 13-10-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 COP00_11215 ada6507be7f3bd99221486aafc7329f0 192 TIGRFAM TIGR00636 PduO_Nterm: ATP:cob(I)alamin adenosyltransferase 4 178 9.1E-65 T 13-10-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 COP00_11215 ada6507be7f3bd99221486aafc7329f0 192 SUPERFAMILY SSF89028 1 178 1.47E-65 T 13-10-2018 IPR036451 Cobalamin adenosyltransferase-like superfamily KEGG: 00860+2.5.1.17|Reactome: R-HSA-196741|Reactome: R-HSA-3359471 COP00_01380 5519544c029d94de0aaa0f206240f304 197 SUPERFAMILY SSF158791 134 192 2.75E-10 T 13-10-2018 COP00_01380 5519544c029d94de0aaa0f206240f304 197 Pfam PF03448 MgtE intracellular N domain 135 194 6.8E-10 T 13-10-2018 IPR006668 Magnesium transporter, MgtE intracellular domain COP00_01380 5519544c029d94de0aaa0f206240f304 197 Gene3D G3DSA:1.25.60.10 129 197 5.7E-10 T 13-10-2018 IPR038076 MgtE, N-terminal domain superfamily COP00_21450 09dcdd3d245ffdd8d91daf1031288c66 209 SUPERFAMILY SSF56037 52 207 5.49E-16 T 13-10-2018 COP00_16395 5f0d6397be08d5ec384cfdf94c9e2c79 308 TIGRFAM TIGR01139 cysK: cysteine synthase A 10 305 2.7E-147 T 13-10-2018 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 COP00_16395 5f0d6397be08d5ec384cfdf94c9e2c79 308 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 34 52 - T 13-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 COP00_16395 5f0d6397be08d5ec384cfdf94c9e2c79 308 TIGRFAM TIGR01136 cysKM: cysteine synthase 10 305 4.4E-138 T 13-10-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 COP00_16395 5f0d6397be08d5ec384cfdf94c9e2c79 308 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 10 293 1.8E-74 T 13-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme COP00_16395 5f0d6397be08d5ec384cfdf94c9e2c79 308 Gene3D G3DSA:3.40.50.1100 46 144 4.5E-126 T 13-10-2018 COP00_16395 5f0d6397be08d5ec384cfdf94c9e2c79 308 Gene3D G3DSA:3.40.50.1100 7 301 4.5E-126 T 13-10-2018 COP00_16395 5f0d6397be08d5ec384cfdf94c9e2c79 308 SUPERFAMILY SSF53686 3 306 8.25E-108 T 13-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme COP00_24275 ca1be375adfe00f2a54fb7927b7ce714 262 Pfam PF02498 BRO family, N-terminal domain 14 100 6.3E-30 T 13-10-2018 IPR003497 BRO N-terminal domain COP00_24275 ca1be375adfe00f2a54fb7927b7ce714 262 SMART SM01040 14 100 5.6E-44 T 13-10-2018 IPR003497 BRO N-terminal domain COP00_24275 ca1be375adfe00f2a54fb7927b7ce714 262 Pfam PF03374 Phage antirepressor protein KilAC domain 144 242 2.1E-22 T 13-10-2018 IPR005039 Antirepressor protein, C-terminal GO:0003677 COP00_12200 4687c81a04e4927ad2dfeb870abcb714 316 SUPERFAMILY SSF52283 13 133 1.51E-29 T 13-10-2018 COP00_12200 4687c81a04e4927ad2dfeb870abcb714 316 SUPERFAMILY SSF51735 100 282 1.29E-59 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily COP00_12200 4687c81a04e4927ad2dfeb870abcb714 316 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 192 214 - T 13-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site COP00_12200 4687c81a04e4927ad2dfeb870abcb714 316 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 19 314 1.1E-27 T 13-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 COP00_12200 4687c81a04e4927ad2dfeb870abcb714 316 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 109 281 6.7E-64 T 13-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 COP00_12200 4687c81a04e4927ad2dfeb870abcb714 316 Gene3D G3DSA:3.40.50.720 98 282 2.1E-105 T 13-10-2018 COP00_12200 4687c81a04e4927ad2dfeb870abcb714 316 Gene3D G3DSA:3.40.50.720 31 305 2.1E-105 T 13-10-2018 COP00_02150 05347033417ea949cd765c27beb8dcf9 125 Pfam PF17094 Uncharacterised protein family (UPF0715) 9 117 1.8E-19 T 13-10-2018 IPR031374 Uncharacterised protein family UPF0715 COP00_02150 05347033417ea949cd765c27beb8dcf9 125 ProDom PD015812 YOPD YWLA YOAG 9 120 4.0E-7 T 13-10-2018 IPR031374 Uncharacterised protein family UPF0715 COP00_17265 85ce4a7362bbf4e1faa4154f12233e8a 480 SUPERFAMILY SSF52540 220 397 2.18E-20 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_17265 85ce4a7362bbf4e1faa4154f12233e8a 480 Gene3D G3DSA:3.40.50.300 200 458 1.1E-33 T 13-10-2018 COP00_05300 05c78801479e7f1daf39dc2fe9a7ce80 219 SUPERFAMILY SSF53098 74 208 4.3E-21 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily COP00_05300 05c78801479e7f1daf39dc2fe9a7ce80 219 Gene3D G3DSA:3.30.420.10 74 216 1.5E-27 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 COP00_05300 05c78801479e7f1daf39dc2fe9a7ce80 219 Pfam PF13456 Reverse transcriptase-like 79 204 9.6E-16 T 13-10-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 COP00_06470 7e20620d2437db3ca00ada7eed9b705f 220 Gene3D G3DSA:1.10.3720.10 3 219 1.0E-55 T 13-10-2018 IPR035906 MetI-like superfamily COP00_06470 7e20620d2437db3ca00ada7eed9b705f 220 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 13 111 4.1E-31 T 13-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 COP00_06470 7e20620d2437db3ca00ada7eed9b705f 220 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 34 217 1.0E-22 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 COP00_06470 7e20620d2437db3ca00ada7eed9b705f 220 SUPERFAMILY SSF161098 14 202 1.31E-44 T 13-10-2018 IPR035906 MetI-like superfamily COP00_22725 cda37215d1f52ee56176b7993bd29719 406 TIGRFAM TIGR00120 ArgJ: glutamate N-acetyltransferase/amino-acid acetyltransferase 12 406 5.6E-170 T 13-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 COP00_22725 cda37215d1f52ee56176b7993bd29719 406 SUPERFAMILY SSF56266 19 402 1.29E-137 T 13-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 COP00_22725 cda37215d1f52ee56176b7993bd29719 406 Gene3D G3DSA:3.60.70.12 5 192 9.4E-66 T 13-10-2018 IPR016117 ArgJ-like domain superfamily KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 COP00_22725 cda37215d1f52ee56176b7993bd29719 406 Gene3D G3DSA:3.10.20.340 278 406 5.5E-50 T 13-10-2018 COP00_22725 cda37215d1f52ee56176b7993bd29719 406 Gene3D G3DSA:3.30.2330.10 193 277 2.2E-32 T 13-10-2018 COP00_22725 cda37215d1f52ee56176b7993bd29719 406 Pfam PF01960 ArgJ family 24 406 7.4E-151 T 13-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 COP00_22725 cda37215d1f52ee56176b7993bd29719 406 ProDom PD004193 ACETYLTRANSFERASE ORNITHINE ARGININE BIOSYNTHESIS ARGJ GLUTAMATE N-ACETYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIFUNCTIONAL 35 406 0.0 T 13-10-2018 COP00_22725 cda37215d1f52ee56176b7993bd29719 406 Hamap MF_01106 Arginine biosynthesis bifunctional protein ArgJ [argJ]. 1 406 143.311 T 13-10-2018 IPR002813 Arginine biosynthesis protein ArgJ GO:0004358|GO:0006526 KEGG: 00220+2.3.1.35+2.3.1.1|MetaCyc: PWY-5154 COP00_13730 5468d5f1a1b0bca75cb989c05424aa07 213 Gene3D G3DSA:3.40.50.720 1 211 3.7E-54 T 13-10-2018 COP00_13730 5468d5f1a1b0bca75cb989c05424aa07 213 SUPERFAMILY SSF51735 1 211 2.42E-33 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily COP00_13730 5468d5f1a1b0bca75cb989c05424aa07 213 Pfam PF13460 NAD(P)H-binding 7 194 9.1E-24 T 13-10-2018 IPR016040 NAD(P)-binding domain COP00_02115 0dc5b98540bcf3ab6a5f490e2160091b 325 ProSitePatterns PS00368 Ribonucleotide reductase small subunit signature. 96 113 - T 13-10-2018 IPR030475 Ribonucleotide reductase small subunit, acitve site KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 COP00_02115 0dc5b98540bcf3ab6a5f490e2160091b 325 PIRSF PIRSF000355 1 319 4.3E-94 T 13-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 COP00_02115 0dc5b98540bcf3ab6a5f490e2160091b 325 Gene3D G3DSA:1.10.620.20 3 293 1.2E-112 T 13-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 COP00_02115 0dc5b98540bcf3ab6a5f490e2160091b 325 TIGRFAM TIGR04171 RNR_1b_NrdF: ribonucleoside-diphosphate reductase, class 1b, beta subunit 5 322 5.5E-147 T 13-10-2018 IPR026494 Ribonucleoside reductase subunit beta, NrdF GO:0005971|GO:0009263 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 COP00_02115 0dc5b98540bcf3ab6a5f490e2160091b 325 SUPERFAMILY SSF47240 4 322 5.11E-92 T 13-10-2018 IPR009078 Ferritin-like superfamily COP00_02115 0dc5b98540bcf3ab6a5f490e2160091b 325 Pfam PF00268 Ribonucleotide reductase, small chain 8 284 3.2E-81 T 13-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 COP00_15095 2758ac425ddf46b22043c6dd6dc95e67 228 Pfam PF03070 TENA/THI-4/PQQC family 9 215 6.3E-43 T 13-10-2018 IPR004305 Thiaminase-2/PQQC COP00_15095 2758ac425ddf46b22043c6dd6dc95e67 228 TIGRFAM TIGR04306 salvage_TenA: thiaminase II 11 215 3.6E-55 T 13-10-2018 IPR027574 Thiaminase II GO:0006772|GO:0050334 KEGG: 00730+3.5.99.2|MetaCyc: PWY-6899|MetaCyc: PWY-7356 COP00_15095 2758ac425ddf46b22043c6dd6dc95e67 228 Gene3D G3DSA:1.20.910.10 1 227 7.8E-65 T 13-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 COP00_15095 2758ac425ddf46b22043c6dd6dc95e67 228 SUPERFAMILY SSF48613 1 214 2.38E-62 T 13-10-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 COP00_11075 76978daceb48743f9559db153fd7000f 333 Pfam PF01032 FecCD transport family 19 329 8.3E-93 T 13-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 COP00_11075 76978daceb48743f9559db153fd7000f 333 Gene3D G3DSA:1.10.3470.10 5 332 4.5E-90 T 13-10-2018 IPR037294 ABC transporter, BtuC-like COP00_11075 76978daceb48743f9559db153fd7000f 333 SUPERFAMILY SSF81345 4 329 7.59E-80 T 13-10-2018 IPR037294 ABC transporter, BtuC-like COP00_01890 5bb466c574bec0f8032b544db52d98ab 435 SUPERFAMILY SSF51126 27 434 1.65E-83 T 13-10-2018 IPR011050 Pectin lyase fold/virulence factor COP00_01890 5bb466c574bec0f8032b544db52d98ab 435 Gene3D G3DSA:2.160.20.10 25 435 8.7E-164 T 13-10-2018 IPR012334 Pectin lyase fold COP00_01890 5bb466c574bec0f8032b544db52d98ab 435 Pfam PF00544 Pectate lyase 140 351 3.1E-55 T 13-10-2018 IPR002022 Pectate lyase COP00_01890 5bb466c574bec0f8032b544db52d98ab 435 SMART SM00656 111 357 5.3E-50 T 13-10-2018 IPR002022 Pectate lyase COP00_13395 965067cb13f945a424b769b508587c15 329 Gene3D G3DSA:3.40.50.2300 62 302 6.3E-67 T 13-10-2018 COP00_13395 965067cb13f945a424b769b508587c15 329 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 4.6E-22 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 COP00_13395 965067cb13f945a424b769b508587c15 329 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 4.1E-5 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 COP00_13395 965067cb13f945a424b769b508587c15 329 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 4.1E-5 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 COP00_13395 965067cb13f945a424b769b508587c15 329 SMART SM00354 1 71 9.0E-37 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 COP00_13395 965067cb13f945a424b769b508587c15 329 SUPERFAMILY SSF53822 60 324 4.12E-64 T 13-10-2018 IPR028082 Periplasmic binding protein-like I COP00_13395 965067cb13f945a424b769b508587c15 329 Gene3D G3DSA:3.40.50.2300 155 282 6.3E-67 T 13-10-2018 COP00_13395 965067cb13f945a424b769b508587c15 329 Gene3D G3DSA:1.10.260.40 3 58 1.5E-24 T 13-10-2018 COP00_13395 965067cb13f945a424b769b508587c15 329 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 13-10-2018 COP00_13395 965067cb13f945a424b769b508587c15 329 Pfam PF13377 Periplasmic binding protein-like domain 166 322 2.2E-28 T 13-10-2018 COP00_13395 965067cb13f945a424b769b508587c15 329 SUPERFAMILY SSF47413 2 59 4.03E-18 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 COP00_23220 2a608c7c58283ccaf62ad3756e9de128 572 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 170 331 1.2E-47 T 13-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 COP00_23220 2a608c7c58283ccaf62ad3756e9de128 572 PRINTS PR00397 Sirohaem Fe-binding site signature 432 450 1.5E-8 T 13-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 COP00_23220 2a608c7c58283ccaf62ad3756e9de128 572 PRINTS PR00397 Sirohaem Fe-binding site signature 480 498 1.5E-8 T 13-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 COP00_23220 2a608c7c58283ccaf62ad3756e9de128 572 SUPERFAMILY SSF55124 13 145 2.94E-33 T 13-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 COP00_23220 2a608c7c58283ccaf62ad3756e9de128 572 TIGRFAM TIGR02041 CysI: sulfite reductase (NADPH) hemoprotein, beta-component 17 561 3.4E-290 T 13-10-2018 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 COP00_23220 2a608c7c58283ccaf62ad3756e9de128 572 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 480 496 - T 13-10-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 COP00_23220 2a608c7c58283ccaf62ad3756e9de128 572 SUPERFAMILY SSF56014 146 345 3.93E-58 T 13-10-2018 COP00_23220 2a608c7c58283ccaf62ad3756e9de128 572 Gene3D G3DSA:3.30.413.10 428 569 2.0E-39 T 13-10-2018 COP00_23220 2a608c7c58283ccaf62ad3756e9de128 572 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 432 560 2.0E-4 T 13-10-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 COP00_23220 2a608c7c58283ccaf62ad3756e9de128 572 SUPERFAMILY SSF55124 347 423 3.76E-23 T 13-10-2018 IPR036136 Nitrite/Sulfite reductase ferredoxin-like domain superfamily GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 COP00_23220 2a608c7c58283ccaf62ad3756e9de128 572 SUPERFAMILY SSF56014 430 562 5.23E-37 T 13-10-2018 COP00_23220 2a608c7c58283ccaf62ad3756e9de128 572 Hamap MF_01540 Sulfite reductase [NADPH] hemoprotein beta-component [cysI]. 8 572 58.611 T 13-10-2018 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 COP00_23220 2a608c7c58283ccaf62ad3756e9de128 572 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 75 134 2.2E-14 T 13-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 COP00_23220 2a608c7c58283ccaf62ad3756e9de128 572 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 354 418 1.1E-14 T 13-10-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 COP00_08850 0997d712720f89d985f2d5839ed0998c 266 SUPERFAMILY SSF55486 99 246 1.39E-18 T 13-10-2018 COP00_08850 0997d712720f89d985f2d5839ed0998c 266 Pfam PF13688 Metallo-peptidase family M12 98 243 7.2E-22 T 13-10-2018 COP00_08850 0997d712720f89d985f2d5839ed0998c 266 Gene3D G3DSA:3.40.390.10 84 257 5.9E-12 T 13-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 COP00_15715 e2f57ee3c54919087b1d16e1c2325e21 454 Gene3D G3DSA:3.10.450.310 206 412 1.1E-79 T 13-10-2018 COP00_15715 e2f57ee3c54919087b1d16e1c2325e21 454 Gene3D G3DSA:3.30.310.160 228 369 1.1E-79 T 13-10-2018 COP00_15715 e2f57ee3c54919087b1d16e1c2325e21 454 Pfam PF07435 YycH protein 4 453 2.7E-119 T 13-10-2018 IPR009996 Regulatory protein YycH COP00_13950 ae89dc18bcdb75eabb1e246332398dea 66 Pfam PF01197 Ribosomal protein L31 1 64 2.7E-31 T 13-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 COP00_13950 ae89dc18bcdb75eabb1e246332398dea 66 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 66 28.287 T 13-10-2018 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 COP00_13950 ae89dc18bcdb75eabb1e246332398dea 66 Gene3D G3DSA:2.30.170.50 1 66 1.0E-31 T 13-10-2018 COP00_13950 ae89dc18bcdb75eabb1e246332398dea 66 PRINTS PR01249 Ribosomal protein L31 signature 30 45 5.5E-22 T 13-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 COP00_13950 ae89dc18bcdb75eabb1e246332398dea 66 PRINTS PR01249 Ribosomal protein L31 signature 45 63 5.5E-22 T 13-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 COP00_13950 ae89dc18bcdb75eabb1e246332398dea 66 PRINTS PR01249 Ribosomal protein L31 signature 2 19 5.5E-22 T 13-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 COP00_13950 ae89dc18bcdb75eabb1e246332398dea 66 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 65 7.5E-31 T 13-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 COP00_13950 ae89dc18bcdb75eabb1e246332398dea 66 ProSitePatterns PS01143 Ribosomal protein L31 signature. 34 55 - T 13-10-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 COP00_13950 ae89dc18bcdb75eabb1e246332398dea 66 SUPERFAMILY SSF143800 1 65 2.83E-25 T 13-10-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_01125 34750ca11e722c3b5f4293771fa4d125 450 Gene3D G3DSA:3.40.50.150 144 445 1.2E-89 T 13-10-2018 COP00_01125 34750ca11e722c3b5f4293771fa4d125 450 Gene3D G3DSA:1.10.940.10 1 139 1.6E-40 T 13-10-2018 IPR035926 NusB-like superfamily COP00_01125 34750ca11e722c3b5f4293771fa4d125 450 SUPERFAMILY SSF48013 3 130 1.44E-37 T 13-10-2018 IPR035926 NusB-like superfamily COP00_01125 34750ca11e722c3b5f4293771fa4d125 450 Pfam PF01189 16S rRNA methyltransferase RsmB/F 246 443 1.6E-60 T 13-10-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 COP00_01125 34750ca11e722c3b5f4293771fa4d125 450 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 256 266 2.6E-30 T 13-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase COP00_01125 34750ca11e722c3b5f4293771fa4d125 450 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 324 336 2.6E-30 T 13-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase COP00_01125 34750ca11e722c3b5f4293771fa4d125 450 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 227 241 2.6E-30 T 13-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase COP00_01125 34750ca11e722c3b5f4293771fa4d125 450 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 374 390 2.6E-30 T 13-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase COP00_01125 34750ca11e722c3b5f4293771fa4d125 450 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 428 445 2.6E-30 T 13-10-2018 IPR023267 RNA (C5-cytosine) methyltransferase COP00_01125 34750ca11e722c3b5f4293771fa4d125 450 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 323 334 - T 13-10-2018 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 COP00_01125 34750ca11e722c3b5f4293771fa4d125 450 SUPERFAMILY SSF53335 139 446 4.91E-80 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase COP00_01125 34750ca11e722c3b5f4293771fa4d125 450 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 7 446 6.6E-185 T 13-10-2018 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 COP00_01125 34750ca11e722c3b5f4293771fa4d125 450 Pfam PF01029 NusB family 5 128 1.2E-31 T 13-10-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 COP00_16560 3f6d63ff110c9cbc8f78d0191f70dc9b 158 Gene3D G3DSA:3.30.1330.50 1 158 2.8E-69 T 13-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 COP00_16560 3f6d63ff110c9cbc8f78d0191f70dc9b 158 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 2 157 37.065 T 13-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 COP00_16560 3f6d63ff110c9cbc8f78d0191f70dc9b 158 SUPERFAMILY SSF69765 1 157 7.33E-67 T 13-10-2018 IPR036571 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase superfamily GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 COP00_16560 3f6d63ff110c9cbc8f78d0191f70dc9b 158 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 3 157 1.8E-72 T 13-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 COP00_16560 3f6d63ff110c9cbc8f78d0191f70dc9b 158 Pfam PF02542 YgbB family 2 156 1.1E-65 T 13-10-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 COP00_16560 3f6d63ff110c9cbc8f78d0191f70dc9b 158 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 36 51 - T 13-10-2018 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 COP00_07790 55dae65c58264fdf870b97e2388518b8 113 Pfam PF13273 Protein of unknown function (DUF4064) 2 81 5.1E-13 T 13-10-2018 IPR025273 Domain of unknown function DUF4064 COP00_08140 2a549e742fa64d891b328b141a6b7775 242 PIRSF PIRSF039085 1 241 8.5E-117 T 13-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 COP00_08140 2a549e742fa64d891b328b141a6b7775 242 SUPERFAMILY SSF52540 1 234 2.79E-80 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_08140 2a549e742fa64d891b328b141a6b7775 242 Gene3D G3DSA:3.40.50.300 1 240 8.1E-78 T 13-10-2018 COP00_08140 2a549e742fa64d891b328b141a6b7775 242 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 COP00_08140 2a549e742fa64d891b328b141a6b7775 242 SMART SM00382 26 213 2.2E-16 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_08140 2a549e742fa64d891b328b141a6b7775 242 Pfam PF00005 ABC transporter 17 165 5.0E-39 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 COP00_05245 d897317e2a408e8b4c740c7e732a0a41 379 SUPERFAMILY SSF110836 1 83 3.66E-23 T 13-10-2018 IPR036498 Scaffold protein Nfu/NifU, N-terminal domain superfamily COP00_05245 d897317e2a408e8b4c740c7e732a0a41 379 Gene3D G3DSA:1.25.10.10 190 379 7.0E-29 T 13-10-2018 IPR011989 Armadillo-like helical COP00_05245 d897317e2a408e8b4c740c7e732a0a41 379 Pfam PF13769 Virulence factor 109 188 8.4E-31 T 13-10-2018 IPR025989 Virulence factor domain COP00_05245 d897317e2a408e8b4c740c7e732a0a41 379 Pfam PF13646 HEAT repeats 269 344 3.0E-14 T 13-10-2018 COP00_05245 d897317e2a408e8b4c740c7e732a0a41 379 SMART SM00567 E-Z type HEAT repeats 221 248 1000.0 T 13-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 COP00_05245 d897317e2a408e8b4c740c7e732a0a41 379 SMART SM00567 E-Z type HEAT repeats 250 279 0.004 T 13-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 COP00_05245 d897317e2a408e8b4c740c7e732a0a41 379 SMART SM00567 E-Z type HEAT repeats 281 310 7.2E-4 T 13-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 COP00_05245 d897317e2a408e8b4c740c7e732a0a41 379 SMART SM00567 E-Z type HEAT repeats 312 341 3.3E-4 T 13-10-2018 IPR004155 PBS lyase HEAT-like repeat Reactome: R-HSA-204626 COP00_05245 d897317e2a408e8b4c740c7e732a0a41 379 SUPERFAMILY SSF48371 207 375 1.85E-35 T 13-10-2018 IPR016024 Armadillo-type fold COP00_05245 d897317e2a408e8b4c740c7e732a0a41 379 SMART SM00932 4 90 6.9E-29 T 13-10-2018 IPR014824 Scaffold protein Nfu/NifU, N-terminal COP00_05245 d897317e2a408e8b4c740c7e732a0a41 379 Gene3D G3DSA:3.30.1370.70 1 91 2.3E-27 T 13-10-2018 IPR036498 Scaffold protein Nfu/NifU, N-terminal domain superfamily COP00_05245 d897317e2a408e8b4c740c7e732a0a41 379 Pfam PF08712 Scaffold protein Nfu/NifU N terminal 6 83 1.6E-19 T 13-10-2018 IPR014824 Scaffold protein Nfu/NifU, N-terminal COP00_00870 434593e502a325861abbcb2a7c15721f 230 Gene3D G3DSA:3.30.70.1880 89 229 6.4E-34 T 13-10-2018 COP00_00870 434593e502a325861abbcb2a7c15721f 230 Pfam PF05949 Bacterial protein of unknown function (DUF881) 91 224 6.6E-35 T 13-10-2018 IPR010273 Protein of unknown function DUF881 COP00_13350 0689cb8dc32b20aa3c8807ea8d6f38d3 377 Gene3D G3DSA:3.90.180.10 4 364 8.0E-124 T 13-10-2018 COP00_13350 0689cb8dc32b20aa3c8807ea8d6f38d3 377 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 137 7.3E-29 T 13-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 COP00_13350 0689cb8dc32b20aa3c8807ea8d6f38d3 377 Pfam PF13823 Alcohol dehydrogenase GroES-associated 2 23 8.7E-8 T 13-10-2018 IPR027399 Alcohol dehydrogenase GroES-associated COP00_13350 0689cb8dc32b20aa3c8807ea8d6f38d3 377 SUPERFAMILY SSF50129 2 176 3.93E-57 T 13-10-2018 IPR011032 GroES-like superfamily COP00_13350 0689cb8dc32b20aa3c8807ea8d6f38d3 377 Pfam PF00107 Zinc-binding dehydrogenase 188 255 3.9E-11 T 13-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 COP00_13350 0689cb8dc32b20aa3c8807ea8d6f38d3 377 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 58 72 - T 13-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 COP00_13350 0689cb8dc32b20aa3c8807ea8d6f38d3 377 Gene3D G3DSA:3.40.50.720 168 337 8.0E-124 T 13-10-2018 COP00_13350 0689cb8dc32b20aa3c8807ea8d6f38d3 377 SUPERFAMILY SSF51735 155 339 7.52E-49 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily COP00_07730 6542fd1c23c6c452e47f558bddaeb9a1 278 ProSitePatterns PS60000 Chitosanases families 46 and 80 active sites signature. 48 88 - T 13-10-2018 IPR000400 Glycoside hydrolase, family 46 GO:0005576|GO:0005975|GO:0016977 KEGG: 00520+3.2.1.132 COP00_07730 6542fd1c23c6c452e47f558bddaeb9a1 278 Gene3D G3DSA:1.20.141.10 44 268 9.0E-77 T 13-10-2018 COP00_07730 6542fd1c23c6c452e47f558bddaeb9a1 278 SUPERFAMILY SSF53955 18 278 5.34E-81 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily COP00_07730 6542fd1c23c6c452e47f558bddaeb9a1 278 PIRSF PIRSF036551 2 278 1.2E-98 T 13-10-2018 IPR000400 Glycoside hydrolase, family 46 GO:0005576|GO:0005975|GO:0016977 KEGG: 00520+3.2.1.132 COP00_07730 6542fd1c23c6c452e47f558bddaeb9a1 278 Gene3D G3DSA:3.30.386.10 60 153 9.0E-77 T 13-10-2018 IPR023099 Glycoside hydrolase, family 46, N-terminal GO:0005975|GO:0016977 KEGG: 00520+3.2.1.132 COP00_07730 6542fd1c23c6c452e47f558bddaeb9a1 278 Pfam PF01374 Glycosyl hydrolase family 46 49 265 3.7E-74 T 13-10-2018 IPR000400 Glycoside hydrolase, family 46 GO:0005576|GO:0005975|GO:0016977 KEGG: 00520+3.2.1.132 COP00_06760 f9a57a034e00e35f17abdc591c688847 193 SUPERFAMILY SSF51306 39 97 6.15E-10 T 13-10-2018 IPR036286 LexA/Signal peptidase-like superfamily COP00_06760 f9a57a034e00e35f17abdc591c688847 193 TIGRFAM TIGR02228 sigpep_I_arch: signal peptidase I 6 168 4.3E-55 T 13-10-2018 IPR001733 Peptidase S26B GO:0006465|GO:0008233|GO:0016020 COP00_06760 f9a57a034e00e35f17abdc591c688847 193 PRINTS PR00728 Eukaryotic signal peptidase (S26B) family signature 105 116 1.2E-7 T 13-10-2018 IPR001733 Peptidase S26B GO:0006465|GO:0008233|GO:0016020 COP00_06760 f9a57a034e00e35f17abdc591c688847 193 PRINTS PR00728 Eukaryotic signal peptidase (S26B) family signature 47 62 1.2E-7 T 13-10-2018 IPR001733 Peptidase S26B GO:0006465|GO:0008233|GO:0016020 COP00_06760 f9a57a034e00e35f17abdc591c688847 193 Gene3D G3DSA:2.10.109.10 46 99 4.8E-6 T 13-10-2018 COP00_06760 f9a57a034e00e35f17abdc591c688847 193 Pfam PF00717 Peptidase S24-like 46 100 8.6E-9 T 13-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C COP00_18545 388847b0820f55e8d2e724d172e10bca 369 TIGRFAM TIGR00912 2A0309: spore germination protein (amino acid permease) 5 363 1.6E-74 T 13-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 COP00_18545 388847b0820f55e8d2e724d172e10bca 369 Pfam PF03845 Spore germination protein 5 324 3.6E-84 T 13-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 COP00_15600 f962397d7b1e7c4087b49fa7f35a4954 545 SUPERFAMILY SSF52540 105 346 5.17E-13 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_15600 f962397d7b1e7c4087b49fa7f35a4954 545 Gene3D G3DSA:3.40.50.300 122 358 2.4E-10 T 13-10-2018 COP00_15600 f962397d7b1e7c4087b49fa7f35a4954 545 Pfam PF09848 Uncharacterized conserved protein (DUF2075) 185 531 1.8E-98 T 13-10-2018 IPR018647 Domain of unknown function DUF2075 COP00_07985 5e1364e989bf56c488fb7015e69c7910 314 Gene3D G3DSA:2.60.120.10 46 156 4.4E-22 T 13-10-2018 IPR014710 RmlC-like jelly roll fold COP00_07985 5e1364e989bf56c488fb7015e69c7910 314 SUPERFAMILY SSF51182 33 309 1.25E-52 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily COP00_07985 5e1364e989bf56c488fb7015e69c7910 314 Gene3D G3DSA:2.60.120.10 157 314 1.2E-37 T 13-10-2018 IPR014710 RmlC-like jelly roll fold COP00_09815 1e19b1910bc911e3d00de54bf88a4ad5 189 Pfam PF00484 Carbonic anhydrase 34 178 7.8E-19 T 13-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 COP00_09815 1e19b1910bc911e3d00de54bf88a4ad5 189 SMART SM00947 26 182 5.3E-37 T 13-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 COP00_09815 1e19b1910bc911e3d00de54bf88a4ad5 189 Gene3D G3DSA:3.40.1050.10 2 183 7.3E-45 T 13-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 COP00_09815 1e19b1910bc911e3d00de54bf88a4ad5 189 SUPERFAMILY SSF53056 1 181 2.62E-42 T 13-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 COP00_08920 ad0a27afb674ef42d50e4ddae4d964b5 397 Pfam PF13685 Iron-containing alcohol dehydrogenase 31 296 7.0E-72 T 13-10-2018 IPR032837 Glycerol-1-phosphate dehydrogenase KEGG: 00564+1.1.1.261|MetaCyc: PWY-6349 COP00_08920 ad0a27afb674ef42d50e4ddae4d964b5 397 Gene3D G3DSA:1.20.1090.10 180 385 2.2E-61 T 13-10-2018 COP00_08920 ad0a27afb674ef42d50e4ddae4d964b5 397 Gene3D G3DSA:3.40.50.1970 20 179 2.8E-30 T 13-10-2018 COP00_08920 ad0a27afb674ef42d50e4ddae4d964b5 397 SUPERFAMILY SSF56796 20 384 1.01E-57 T 13-10-2018 COP00_06160 37cb9c45a7d79e06ced5f39be95f3178 40 Pfam PF13072 Protein of unknown function (DUF3936) 1 37 4.2E-23 T 13-10-2018 IPR025177 Cell division inhibitor MciZ COP00_19035 542bdad0c5e935b5f0c421f8574b0eac 199 SUPERFAMILY SSF144091 12 193 9.68E-44 T 13-10-2018 COP00_19035 542bdad0c5e935b5f0c421f8574b0eac 199 Gene3D G3DSA:1.20.1540.10 9 196 2.4E-42 T 13-10-2018 IPR035952 Rhomboid-like superfamily COP00_19035 542bdad0c5e935b5f0c421f8574b0eac 199 Pfam PF01694 Rhomboid family 54 194 1.2E-39 T 13-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 COP00_22245 47745fc7b8b58d3c9f8c6c7605a33d91 429 Gene3D G3DSA:1.10.3860.10 1 421 8.8E-137 T 13-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 COP00_22245 47745fc7b8b58d3c9f8c6c7605a33d91 429 PRINTS PR00173 Glutamate-aspartate symporter signature 3 23 8.4E-48 T 13-10-2018 COP00_22245 47745fc7b8b58d3c9f8c6c7605a33d91 429 PRINTS PR00173 Glutamate-aspartate symporter signature 358 378 8.4E-48 T 13-10-2018 COP00_22245 47745fc7b8b58d3c9f8c6c7605a33d91 429 PRINTS PR00173 Glutamate-aspartate symporter signature 196 215 8.4E-48 T 13-10-2018 COP00_22245 47745fc7b8b58d3c9f8c6c7605a33d91 429 PRINTS PR00173 Glutamate-aspartate symporter signature 296 322 8.4E-48 T 13-10-2018 COP00_22245 47745fc7b8b58d3c9f8c6c7605a33d91 429 PRINTS PR00173 Glutamate-aspartate symporter signature 149 171 8.4E-48 T 13-10-2018 COP00_22245 47745fc7b8b58d3c9f8c6c7605a33d91 429 PRINTS PR00173 Glutamate-aspartate symporter signature 47 67 8.4E-48 T 13-10-2018 COP00_22245 47745fc7b8b58d3c9f8c6c7605a33d91 429 PRINTS PR00173 Glutamate-aspartate symporter signature 77 102 8.4E-48 T 13-10-2018 COP00_22245 47745fc7b8b58d3c9f8c6c7605a33d91 429 PRINTS PR00173 Glutamate-aspartate symporter signature 331 350 8.4E-48 T 13-10-2018 COP00_22245 47745fc7b8b58d3c9f8c6c7605a33d91 429 Pfam PF00375 Sodium:dicarboxylate symporter family 9 404 2.4E-126 T 13-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 COP00_22245 47745fc7b8b58d3c9f8c6c7605a33d91 429 ProSitePatterns PS00713 Sodium:dicarboxylate symporter family signature 1. 39 54 - T 13-10-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site COP00_22245 47745fc7b8b58d3c9f8c6c7605a33d91 429 SUPERFAMILY SSF118215 9 405 3.66E-122 T 13-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 COP00_22245 47745fc7b8b58d3c9f8c6c7605a33d91 429 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 299 322 - T 13-10-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site COP00_04995 542ba913bab187ea61a9c107f9e1bc54 304 SUPERFAMILY SSF54593 1 278 3.51E-46 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase COP00_04995 542ba913bab187ea61a9c107f9e1bc54 304 Gene3D G3DSA:3.10.180.10 65 208 1.9E-111 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase COP00_04995 542ba913bab187ea61a9c107f9e1bc54 304 Gene3D G3DSA:3.10.180.10 5 298 1.9E-111 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase COP00_04995 542ba913bab187ea61a9c107f9e1bc54 304 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 263 7.5E-29 T 13-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain COP00_19220 bada7da6bd115f73a54172231d8a532a 304 SUPERFAMILY SSF52768 4 288 1.8E-39 T 13-10-2018 IPR023696 Ureohydrolase domain superfamily COP00_19220 bada7da6bd115f73a54172231d8a532a 304 Pfam PF00491 Arginase family 59 286 1.7E-14 T 13-10-2018 IPR006035 Ureohydrolase GO:0046872 COP00_19220 bada7da6bd115f73a54172231d8a532a 304 Gene3D G3DSA:3.40.800.10 17 293 2.4E-26 T 13-10-2018 COP00_08495 ffa1964229a0ecd1e71946e14aa1e191 246 Pfam PF06750 Bacterial Peptidase A24 N-terminal domain 5 86 2.5E-28 T 13-10-2018 IPR010627 Peptidase A24A, N-terminal COP00_08495 ffa1964229a0ecd1e71946e14aa1e191 246 Pfam PF01478 Type IV leader peptidase family 98 202 1.2E-15 T 13-10-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 COP00_18255 3e7ca99d715da15b5e4cd68b41b0fd6f 359 Gene3D G3DSA:3.40.190.10 143 352 1.9E-85 T 13-10-2018 COP00_18255 3e7ca99d715da15b5e4cd68b41b0fd6f 359 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 102 115 4.8E-8 T 13-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 COP00_18255 3e7ca99d715da15b5e4cd68b41b0fd6f 359 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 158 172 4.8E-8 T 13-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 COP00_18255 3e7ca99d715da15b5e4cd68b41b0fd6f 359 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 261 280 4.8E-8 T 13-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 COP00_18255 3e7ca99d715da15b5e4cd68b41b0fd6f 359 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 57 78 4.8E-8 T 13-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 COP00_18255 3e7ca99d715da15b5e4cd68b41b0fd6f 359 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 133 149 4.8E-8 T 13-10-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 COP00_18255 3e7ca99d715da15b5e4cd68b41b0fd6f 359 Pfam PF13343 Bacterial extracellular solute-binding protein 84 330 1.1E-37 T 13-10-2018 COP00_18255 3e7ca99d715da15b5e4cd68b41b0fd6f 359 Gene3D G3DSA:3.40.190.10 52 323 1.9E-85 T 13-10-2018 COP00_18255 3e7ca99d715da15b5e4cd68b41b0fd6f 359 SUPERFAMILY SSF53850 33 354 1.12E-71 T 13-10-2018 COP00_11280 f79281bc273da46753e4dbce216602a9 581 Gene3D G3DSA:3.30.565.10 428 581 1.4E-36 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily COP00_11280 f79281bc273da46753e4dbce216602a9 581 Gene3D G3DSA:1.10.287.130 327 421 2.4E-12 T 13-10-2018 COP00_11280 f79281bc273da46753e4dbce216602a9 581 SUPERFAMILY SSF47384 339 424 6.08E-14 T 13-10-2018 IPR036097 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily GO:0000155|GO:0007165 COP00_11280 f79281bc273da46753e4dbce216602a9 581 PRINTS PR00344 Bacterial sensor protein C-terminal signature 507 521 5.3E-9 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 COP00_11280 f79281bc273da46753e4dbce216602a9 581 PRINTS PR00344 Bacterial sensor protein C-terminal signature 541 559 5.3E-9 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 COP00_11280 f79281bc273da46753e4dbce216602a9 581 PRINTS PR00344 Bacterial sensor protein C-terminal signature 565 578 5.3E-9 T 13-10-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 COP00_11280 f79281bc273da46753e4dbce216602a9 581 Pfam PF00512 His Kinase A (phospho-acceptor) domain 357 420 5.6E-12 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 COP00_11280 f79281bc273da46753e4dbce216602a9 581 SMART SM00387 470 581 3.1E-29 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase COP00_11280 f79281bc273da46753e4dbce216602a9 581 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 471 580 2.0E-23 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase COP00_11280 f79281bc273da46753e4dbce216602a9 581 SMART SM00388 356 424 2.9E-11 T 13-10-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 COP00_11280 f79281bc273da46753e4dbce216602a9 581 SUPERFAMILY SSF55874 414 578 4.71E-35 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily COP00_13370 ba851f4a1624e0a3a071e6eef54e2579 406 SUPERFAMILY SSF54001 24 152 6.87E-35 T 13-10-2018 IPR038765 Papain-like cysteine peptidase superfamily COP00_13370 ba851f4a1624e0a3a071e6eef54e2579 406 Pfam PF00877 NlpC/P60 family 40 150 9.5E-26 T 13-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain COP00_13370 ba851f4a1624e0a3a071e6eef54e2579 406 Pfam PF00877 NlpC/P60 family 300 403 8.5E-21 T 13-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain COP00_13370 ba851f4a1624e0a3a071e6eef54e2579 406 Pfam PF00877 NlpC/P60 family 171 278 2.4E-29 T 13-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain COP00_13370 ba851f4a1624e0a3a071e6eef54e2579 406 SUPERFAMILY SSF54001 285 405 4.37E-26 T 13-10-2018 IPR038765 Papain-like cysteine peptidase superfamily COP00_13370 ba851f4a1624e0a3a071e6eef54e2579 406 Gene3D G3DSA:3.90.1720.10 20 154 5.8E-40 T 13-10-2018 COP00_13370 ba851f4a1624e0a3a071e6eef54e2579 406 Gene3D G3DSA:3.90.1720.10 155 281 4.9E-43 T 13-10-2018 COP00_13370 ba851f4a1624e0a3a071e6eef54e2579 406 Gene3D G3DSA:3.90.1720.10 283 406 5.4E-31 T 13-10-2018 COP00_13370 ba851f4a1624e0a3a071e6eef54e2579 406 SUPERFAMILY SSF54001 159 280 2.75E-40 T 13-10-2018 IPR038765 Papain-like cysteine peptidase superfamily COP00_09120 0311e01f00c74cd4c599945fe2ca5eaa 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 6 25 1.1E-89 T 13-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 COP00_09120 0311e01f00c74cd4c599945fe2ca5eaa 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 93 109 1.1E-89 T 13-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 COP00_09120 0311e01f00c74cd4c599945fe2ca5eaa 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 31 44 1.1E-89 T 13-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 COP00_09120 0311e01f00c74cd4c599945fe2ca5eaa 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 120 137 1.1E-89 T 13-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 COP00_09120 0311e01f00c74cd4c599945fe2ca5eaa 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 239 261 1.1E-89 T 13-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 COP00_09120 0311e01f00c74cd4c599945fe2ca5eaa 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 138 156 1.1E-89 T 13-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 COP00_09120 0311e01f00c74cd4c599945fe2ca5eaa 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 176 193 1.1E-89 T 13-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 COP00_09120 0311e01f00c74cd4c599945fe2ca5eaa 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 212 224 1.1E-89 T 13-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 COP00_09120 0311e01f00c74cd4c599945fe2ca5eaa 319 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 158 174 1.1E-89 T 13-10-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 COP00_09120 0311e01f00c74cd4c599945fe2ca5eaa 319 Hamap MF_00339 ATP-dependent 6-phosphofructokinase [pfkA]. 1 318 49.751 T 13-10-2018 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 COP00_09120 0311e01f00c74cd4c599945fe2ca5eaa 319 Gene3D G3DSA:3.40.50.460 142 251 4.2E-122 T 13-10-2018 COP00_09120 0311e01f00c74cd4c599945fe2ca5eaa 319 SUPERFAMILY SSF53784 1 314 4.19E-121 T 13-10-2018 IPR035966 Phosphofructokinase superfamily GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 COP00_09120 0311e01f00c74cd4c599945fe2ca5eaa 319 Pfam PF00365 Phosphofructokinase 3 275 1.4E-114 T 13-10-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 COP00_09120 0311e01f00c74cd4c599945fe2ca5eaa 319 Gene3D G3DSA:3.40.50.450 3 279 4.2E-122 T 13-10-2018 COP00_09120 0311e01f00c74cd4c599945fe2ca5eaa 319 TIGRFAM TIGR02482 PFKA_ATP: 6-phosphofructokinase 3 299 2.8E-143 T 13-10-2018 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 COP00_09120 0311e01f00c74cd4c599945fe2ca5eaa 319 ProSitePatterns PS00433 Phosphofructokinase signature. 243 261 - T 13-10-2018 IPR015912 Phosphofructokinase, conserved site GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 COP00_09120 0311e01f00c74cd4c599945fe2ca5eaa 319 PIRSF PIRSF000532 1 319 9.1E-126 T 13-10-2018 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type GO:0005524|GO:0006002|GO:0006096|GO:0008443 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 COP00_00695 dc27743e483620522b2966c69f9c0ae0 623 SUPERFAMILY SSF81442 15 523 1.2E-179 T 13-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 COP00_00695 dc27743e483620522b2966c69f9c0ae0 623 TIGRFAM TIGR02891 CtaD_CoxA: cytochrome c oxidase, subunit I 18 521 1.3E-210 T 13-10-2018 IPR014241 Cytochrome c oxidase, subunit I bacterial type GO:0004129|GO:0005886|GO:0015990|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279 COP00_00695 dc27743e483620522b2966c69f9c0ae0 623 PRINTS PR01165 Cytochrome c oxidase subunit I signature 91 115 3.6E-103 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 COP00_00695 dc27743e483620522b2966c69f9c0ae0 623 PRINTS PR01165 Cytochrome c oxidase subunit I signature 163 181 3.6E-103 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 COP00_00695 dc27743e483620522b2966c69f9c0ae0 623 PRINTS PR01165 Cytochrome c oxidase subunit I signature 376 395 3.6E-103 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 COP00_00695 dc27743e483620522b2966c69f9c0ae0 623 PRINTS PR01165 Cytochrome c oxidase subunit I signature 313 334 3.6E-103 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 COP00_00695 dc27743e483620522b2966c69f9c0ae0 623 PRINTS PR01165 Cytochrome c oxidase subunit I signature 348 366 3.6E-103 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 COP00_00695 dc27743e483620522b2966c69f9c0ae0 623 PRINTS PR01165 Cytochrome c oxidase subunit I signature 243 264 3.6E-103 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 COP00_00695 dc27743e483620522b2966c69f9c0ae0 623 PRINTS PR01165 Cytochrome c oxidase subunit I signature 133 145 3.6E-103 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 COP00_00695 dc27743e483620522b2966c69f9c0ae0 623 PRINTS PR01165 Cytochrome c oxidase subunit I signature 192 211 3.6E-103 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 COP00_00695 dc27743e483620522b2966c69f9c0ae0 623 PRINTS PR01165 Cytochrome c oxidase subunit I signature 17 42 3.6E-103 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 COP00_00695 dc27743e483620522b2966c69f9c0ae0 623 PRINTS PR01165 Cytochrome c oxidase subunit I signature 64 87 3.6E-103 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 COP00_00695 dc27743e483620522b2966c69f9c0ae0 623 PRINTS PR01165 Cytochrome c oxidase subunit I signature 289 304 3.6E-103 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 COP00_00695 dc27743e483620522b2966c69f9c0ae0 623 PRINTS PR01165 Cytochrome c oxidase subunit I signature 426 447 3.6E-103 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 COP00_00695 dc27743e483620522b2966c69f9c0ae0 623 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 26 470 3.8E-147 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 COP00_00695 dc27743e483620522b2966c69f9c0ae0 623 Gene3D G3DSA:1.20.210.10 2 529 9.1E-206 T 13-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 COP00_00695 dc27743e483620522b2966c69f9c0ae0 623 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 245 299 - T 13-10-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 COP00_19040 71beca65259f5c1294612eefe5d626d8 338 Pfam PF14285 Domain of unknown function (DUF4367) 235 332 2.4E-5 T 13-10-2018 IPR025377 Domain of unknown function DUF4367 COP00_19040 71beca65259f5c1294612eefe5d626d8 338 SUPERFAMILY SSF89392 32 206 4.12E-22 T 13-10-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX COP00_19040 71beca65259f5c1294612eefe5d626d8 338 Gene3D G3DSA:2.50.20.10 31 214 2.1E-11 T 13-10-2018 COP00_18590 5a56a4f14a9d2edf5c9e17934b4919da 314 Pfam PF01032 FecCD transport family 33 311 5.1E-55 T 13-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 COP00_18590 5a56a4f14a9d2edf5c9e17934b4919da 314 SUPERFAMILY SSF81345 8 311 2.22E-58 T 13-10-2018 IPR037294 ABC transporter, BtuC-like COP00_18590 5a56a4f14a9d2edf5c9e17934b4919da 314 Gene3D G3DSA:1.10.3470.10 5 314 2.0E-58 T 13-10-2018 IPR037294 ABC transporter, BtuC-like COP00_03585 c82fe3477343e22f5cb717753416e830 222 Pfam PF00239 Resolvase, N terminal domain 3 147 4.0E-26 T 13-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 COP00_03585 c82fe3477343e22f5cb717753416e830 222 SMART SM00857 3 149 5.1E-33 T 13-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 COP00_03585 c82fe3477343e22f5cb717753416e830 222 Gene3D G3DSA:3.40.50.1390 1 155 2.7E-27 T 13-10-2018 COP00_03585 c82fe3477343e22f5cb717753416e830 222 SUPERFAMILY SSF53041 3 149 9.55E-25 T 13-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 COP00_18620 fe89d5053737c1993e7f76d649fe931b 245 Pfam PF00881 Nitroreductase family 11 164 2.4E-23 T 13-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 COP00_18620 fe89d5053737c1993e7f76d649fe931b 245 Gene3D G3DSA:3.40.109.10 1 245 8.2E-80 T 13-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 COP00_18620 fe89d5053737c1993e7f76d649fe931b 245 SUPERFAMILY SSF55469 1 244 1.44E-71 T 13-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 COP00_18620 fe89d5053737c1993e7f76d649fe931b 245 PIRSF PIRSF005426 1 245 6.6E-91 T 13-10-2018 IPR016446 Flavin oxidoreductase Frp family GO:0016491|GO:0055114 COP00_10870 b9d2502d428bd5d96b931ee261b33591 242 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 47 63 2.0E-9 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 COP00_10870 b9d2502d428bd5d96b931ee261b33591 242 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 33 47 2.0E-9 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 COP00_10870 b9d2502d428bd5d96b931ee261b33591 242 Pfam PF00392 Bacterial regulatory proteins, gntR family 10 73 3.1E-22 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 COP00_10870 b9d2502d428bd5d96b931ee261b33591 242 SMART SM00345 14 73 1.6E-23 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 COP00_10870 b9d2502d428bd5d96b931ee261b33591 242 SUPERFAMILY SSF64288 61 238 2.51E-41 T 13-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily COP00_10870 b9d2502d428bd5d96b931ee261b33591 242 SUPERFAMILY SSF46785 2 82 2.22E-23 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_10870 b9d2502d428bd5d96b931ee261b33591 242 Gene3D G3DSA:3.40.1410.10 76 240 2.2E-36 T 13-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily COP00_10870 b9d2502d428bd5d96b931ee261b33591 242 Gene3D G3DSA:1.10.10.10 1 75 2.2E-27 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_10870 b9d2502d428bd5d96b931ee261b33591 242 Pfam PF07702 UTRA domain 95 233 2.4E-30 T 13-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 COP00_10870 b9d2502d428bd5d96b931ee261b33591 242 SMART SM00866 94 234 7.5E-24 T 13-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 COP00_07110 68549a3358b65f7f4e05b5f3dc09963d 297 SMART SM00518 3 285 1.8E-136 T 13-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 COP00_07110 68549a3358b65f7f4e05b5f3dc09963d 297 ProSitePatterns PS00729 AP endonucleases family 2 signature 1. 69 77 - T 13-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 COP00_07110 68549a3358b65f7f4e05b5f3dc09963d 297 ProSitePatterns PS00731 AP endonucleases family 2 signature 3. 213 229 - T 13-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 COP00_07110 68549a3358b65f7f4e05b5f3dc09963d 297 ProSitePatterns PS00730 AP endonucleases family 2 signature 2. 175 182 - T 13-10-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 COP00_07110 68549a3358b65f7f4e05b5f3dc09963d 297 Pfam PF01261 Xylose isomerase-like TIM barrel 22 237 1.5E-40 T 13-10-2018 IPR013022 Xylose isomerase-like, TIM barrel domain COP00_07110 68549a3358b65f7f4e05b5f3dc09963d 297 Gene3D G3DSA:3.20.20.150 1 297 1.6E-104 T 13-10-2018 COP00_07110 68549a3358b65f7f4e05b5f3dc09963d 297 Hamap MF_00152 Probable endonuclease 4 [nfo]. 2 285 42.98 T 13-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 COP00_07110 68549a3358b65f7f4e05b5f3dc09963d 297 TIGRFAM TIGR00587 nfo: apurinic endonuclease (APN1) 3 282 5.5E-107 T 13-10-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 COP00_07110 68549a3358b65f7f4e05b5f3dc09963d 297 SUPERFAMILY SSF51658 2 295 6.15E-105 T 13-10-2018 IPR036237 Xylose isomerase-like superfamily COP00_14350 144f0e4a3ca388e54c5d56d4e59dc2e8 325 SUPERFAMILY SSF81464 19 119 1.62E-24 T 13-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 COP00_14350 144f0e4a3ca388e54c5d56d4e59dc2e8 325 TIGRFAM TIGR01432 QOXA: cytochrome aa3 quinol oxidase, subunit II 16 241 3.2E-123 T 13-10-2018 IPR006332 Quinol oxidase subunit II GO:0009486|GO:0016021|GO:0016682|GO:0055114 COP00_14350 144f0e4a3ca388e54c5d56d4e59dc2e8 325 PIRSF PIRSF000292 4 314 2.6E-111 T 13-10-2018 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 COP00_14350 144f0e4a3ca388e54c5d56d4e59dc2e8 325 PRINTS PR01166 Cytochrome c oxidase subunit II signature 99 119 9.9E-5 T 13-10-2018 COP00_14350 144f0e4a3ca388e54c5d56d4e59dc2e8 325 PRINTS PR01166 Cytochrome c oxidase subunit II signature 87 99 9.9E-5 T 13-10-2018 COP00_14350 144f0e4a3ca388e54c5d56d4e59dc2e8 325 Pfam PF02790 Cytochrome C oxidase subunit II, transmembrane domain 39 111 1.5E-10 T 13-10-2018 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 COP00_14350 144f0e4a3ca388e54c5d56d4e59dc2e8 325 Gene3D G3DSA:1.10.287.90 29 115 5.5E-30 T 13-10-2018 IPR036257 Cytochrome C oxidase subunit II, transmembrane domain superfamily Reactome: R-HSA-5628897|Reactome: R-HSA-611105 COP00_14350 144f0e4a3ca388e54c5d56d4e59dc2e8 325 SUPERFAMILY SSF49503 126 277 3.43E-42 T 13-10-2018 IPR008972 Cupredoxin COP00_14350 144f0e4a3ca388e54c5d56d4e59dc2e8 325 Gene3D G3DSA:2.60.40.420 116 277 2.9E-42 T 13-10-2018 IPR008972 Cupredoxin COP00_17415 dd626cf7e34a9873b6d1d692ceb281dc 294 SUPERFAMILY SSF53474 22 292 1.28E-48 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold COP00_17415 dd626cf7e34a9873b6d1d692ceb281dc 294 Gene3D G3DSA:3.40.50.1820 2 294 5.6E-83 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold COP00_17415 dd626cf7e34a9873b6d1d692ceb281dc 294 Pfam PF12697 Alpha/beta hydrolase family 58 286 1.7E-12 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 COP00_06975 99bde03108c931315c9a47207afb4400 512 Gene3D G3DSA:1.20.1540.10 176 363 1.0E-45 T 13-10-2018 IPR035952 Rhomboid-like superfamily COP00_06975 99bde03108c931315c9a47207afb4400 512 SUPERFAMILY SSF48452 397 512 9.63E-16 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 COP00_06975 99bde03108c931315c9a47207afb4400 512 SMART SM00028 429 462 52.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 COP00_06975 99bde03108c931315c9a47207afb4400 512 SMART SM00028 463 496 0.87 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 COP00_06975 99bde03108c931315c9a47207afb4400 512 Pfam PF01694 Rhomboid family 224 358 2.5E-37 T 13-10-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 COP00_06975 99bde03108c931315c9a47207afb4400 512 SUPERFAMILY SSF144091 180 362 2.35E-43 T 13-10-2018 COP00_06975 99bde03108c931315c9a47207afb4400 512 Gene3D G3DSA:1.25.40.10 390 510 2.3E-13 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 COP00_06975 99bde03108c931315c9a47207afb4400 512 Pfam PF13432 Tetratricopeptide repeat 435 496 2.7E-8 T 13-10-2018 COP00_21525 725b4af77e179c04093525d72c06c4d4 231 SUPERFAMILY SSF52540 1 224 3.25E-51 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_21525 725b4af77e179c04093525d72c06c4d4 231 Pfam PF00005 ABC transporter 17 152 2.4E-24 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 COP00_21525 725b4af77e179c04093525d72c06c4d4 231 SMART SM00382 26 202 7.2E-16 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_21525 725b4af77e179c04093525d72c06c4d4 231 Gene3D G3DSA:3.40.50.300 1 223 1.9E-51 T 13-10-2018 COP00_12325 138f82e2291bd993e34b4082e6926adc 489 Pfam PF10651 Domain of unknown function (DUF2479) 7 147 8.7E-30 T 13-10-2018 IPR018913 Domain of unknown function DUF2479 COP00_12325 138f82e2291bd993e34b4082e6926adc 489 Gene3D G3DSA:2.60.40.3350 12 124 5.4E-5 T 13-10-2018 COP00_01040 8d3bd18d626781cc4fa708d2769c7579 233 TIGRFAM TIGR02055 APS_reductase: adenylylsulfate reductase, thioredoxin dependent 43 231 4.9E-79 T 13-10-2018 IPR011798 Adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019344|GO:0055114 KEGG: 00920+1.8.4.8 COP00_01040 8d3bd18d626781cc4fa708d2769c7579 233 PIRSF PIRSF000857 5 233 8.7E-90 T 13-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 COP00_01040 8d3bd18d626781cc4fa708d2769c7579 233 TIGRFAM TIGR00434 cysH: phosophoadenylyl-sulfate reductase 24 233 4.8E-97 T 13-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 COP00_01040 8d3bd18d626781cc4fa708d2769c7579 233 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 38 209 7.7E-55 T 13-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 COP00_01040 8d3bd18d626781cc4fa708d2769c7579 233 SUPERFAMILY SSF52402 17 197 2.15E-53 T 13-10-2018 COP00_01040 8d3bd18d626781cc4fa708d2769c7579 233 Gene3D G3DSA:3.40.50.620 11 233 6.3E-75 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold COP00_01040 8d3bd18d626781cc4fa708d2769c7579 233 Hamap MF_00063 Phosphoadenosine phosphosulfate reductase [cysH]. 1 233 42.253 T 13-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 COP00_00660 2e124852fe0b72c64751f40ceb9c45fe 309 Pfam PF04960 Glutaminase 23 309 7.0E-113 T 13-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 COP00_00660 2e124852fe0b72c64751f40ceb9c45fe 309 TIGRFAM TIGR03814 Gln_ase: glutaminase A 9 309 3.7E-124 T 13-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 COP00_00660 2e124852fe0b72c64751f40ceb9c45fe 309 SUPERFAMILY SSF56601 8 309 2.72E-115 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like COP00_00660 2e124852fe0b72c64751f40ceb9c45fe 309 Hamap MF_00313 Glutaminase [glsA]. 5 309 46.024 T 13-10-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 COP00_00660 2e124852fe0b72c64751f40ceb9c45fe 309 Gene3D G3DSA:3.40.710.10 3 309 4.0E-115 T 13-10-2018 COP00_00100 0e5a9ab3d36348dd422ce76575fda1a0 68 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 6 66 3.6E-7 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 COP00_00100 0e5a9ab3d36348dd422ce76575fda1a0 68 Gene3D G3DSA:1.10.260.40 3 68 3.0E-6 T 13-10-2018 COP00_00100 0e5a9ab3d36348dd422ce76575fda1a0 68 SUPERFAMILY SSF47413 2 58 2.92E-7 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 COP00_15360 cdf9d01c298bdf7e3f4869e2d35f97e6 234 Pfam PF12867 DinB superfamily 60 206 2.3E-6 T 13-10-2018 IPR024775 DinB-like domain COP00_15360 cdf9d01c298bdf7e3f4869e2d35f97e6 234 SUPERFAMILY SSF109854 54 166 2.56E-5 T 13-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes COP00_15360 cdf9d01c298bdf7e3f4869e2d35f97e6 234 Gene3D G3DSA:1.20.120.450 44 218 2.4E-25 T 13-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes COP00_14220 c38d4d7a406ee5048990583d2a440219 271 SUPERFAMILY SSF53448 3 204 1.22E-42 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases COP00_14220 c38d4d7a406ee5048990583d2a440219 271 Pfam PF00535 Glycosyl transferase family 2 4 163 2.8E-25 T 13-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 COP00_14220 c38d4d7a406ee5048990583d2a440219 271 Gene3D G3DSA:3.90.550.10 1 235 1.3E-40 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases COP00_06430 fd6e50becf875d02b904e9338dfe3ae0 403 Gene3D G3DSA:3.30.70.270 65 109 6.7E-11 T 13-10-2018 COP00_06430 fd6e50becf875d02b904e9338dfe3ae0 403 Gene3D G3DSA:3.30.70.270 110 163 2.4E-16 T 13-10-2018 COP00_06430 fd6e50becf875d02b904e9338dfe3ae0 403 Pfam PF11799 impB/mucB/samB family C-terminal domain 235 339 9.2E-20 T 13-10-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 COP00_06430 fd6e50becf875d02b904e9338dfe3ae0 403 SUPERFAMILY SSF100879 233 331 1.96E-24 T 13-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 COP00_06430 fd6e50becf875d02b904e9338dfe3ae0 403 Gene3D G3DSA:1.10.150.20 164 227 5.6E-14 T 13-10-2018 COP00_06430 fd6e50becf875d02b904e9338dfe3ae0 403 Gene3D G3DSA:2.30.40.20 4 64 4.4E-22 T 13-10-2018 COP00_06430 fd6e50becf875d02b904e9338dfe3ae0 403 SUPERFAMILY SSF56672 1 226 9.78E-76 T 13-10-2018 COP00_06430 fd6e50becf875d02b904e9338dfe3ae0 403 Gene3D G3DSA:3.30.1490.100 235 342 2.9E-25 T 13-10-2018 IPR036775 DNA polymerase, Y-family, little finger domain superfamily GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 COP00_06430 fd6e50becf875d02b904e9338dfe3ae0 403 Pfam PF00817 impB/mucB/samB family 1 146 5.7E-48 T 13-10-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 COP00_06430 fd6e50becf875d02b904e9338dfe3ae0 403 Pfam PF11798 IMS family HHH motif 160 189 8.5E-9 T 13-10-2018 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 COP00_06430 fd6e50becf875d02b904e9338dfe3ae0 403 Hamap MF_01113 DNA polymerase IV [dinB]. 1 345 34.682 T 13-10-2018 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 COP00_20275 6ac96dfd6acec802f8f43eb756333daa 228 SUPERFAMILY SSF51395 5 220 2.93E-53 T 13-10-2018 COP00_20275 6ac96dfd6acec802f8f43eb756333daa 228 Pfam PF01884 PcrB family 2 226 4.0E-95 T 13-10-2018 IPR008205 Geranylgeranylglyceryl phosphate synthase/Heptaprenylglyceryl phosphate synthase GO:0016765 COP00_20275 6ac96dfd6acec802f8f43eb756333daa 228 Gene3D G3DSA:3.20.20.390 1 228 1.2E-92 T 13-10-2018 IPR038597 GGGP/HepGP synthase superfamily COP00_20275 6ac96dfd6acec802f8f43eb756333daa 228 TIGRFAM TIGR01768 GGGP-family: geranylgeranylglyceryl phosphate synthase family protein 9 223 1.6E-72 T 13-10-2018 IPR008205 Geranylgeranylglyceryl phosphate synthase/Heptaprenylglyceryl phosphate synthase GO:0016765 COP00_20275 6ac96dfd6acec802f8f43eb756333daa 228 Hamap MF_00112 Geranylgeranylglyceryl phosphate synthase [pcrB]. 3 226 28.301 T 13-10-2018 IPR008205 Geranylgeranylglyceryl phosphate synthase/Heptaprenylglyceryl phosphate synthase GO:0016765 COP00_21640 310cbed37a8a18de48aeb1eb1544ffc2 220 Gene3D G3DSA:3.40.50.1000 3 202 2.9E-51 T 13-10-2018 IPR023214 HAD superfamily COP00_21640 310cbed37a8a18de48aeb1eb1544ffc2 220 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 57 184 3.0E-17 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 COP00_21640 310cbed37a8a18de48aeb1eb1544ffc2 220 SUPERFAMILY SSF56784 1 207 4.27E-46 T 13-10-2018 IPR036412 HAD-like superfamily COP00_21640 310cbed37a8a18de48aeb1eb1544ffc2 220 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 173 186 6.5E-9 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 COP00_21640 310cbed37a8a18de48aeb1eb1544ffc2 220 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 2 13 6.5E-9 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 COP00_21640 310cbed37a8a18de48aeb1eb1544ffc2 220 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 146 166 6.5E-9 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 COP00_21640 310cbed37a8a18de48aeb1eb1544ffc2 220 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 128 144 6.5E-9 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 COP00_21640 310cbed37a8a18de48aeb1eb1544ffc2 220 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 97 110 6.5E-9 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 COP00_21640 310cbed37a8a18de48aeb1eb1544ffc2 220 Gene3D G3DSA:1.10.150.240 15 84 2.9E-51 T 13-10-2018 IPR023198 Phosphoglycolate phosphatase-like, domain 2 COP00_21640 310cbed37a8a18de48aeb1eb1544ffc2 220 Pfam PF13419 Haloacid dehalogenase-like hydrolase 5 184 1.7E-30 T 13-10-2018 COP00_01350 e34e6ddd919c8022778bcf7817149032 105 Pfam PF02049 Flagellar hook-basal body complex protein FliE 20 105 6.8E-28 T 13-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 COP00_01350 e34e6ddd919c8022778bcf7817149032 105 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 3 105 18.353 T 13-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 COP00_01350 e34e6ddd919c8022778bcf7817149032 105 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 5 105 6.3E-33 T 13-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 COP00_01350 e34e6ddd919c8022778bcf7817149032 105 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 69 85 4.3E-16 T 13-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 COP00_01350 e34e6ddd919c8022778bcf7817149032 105 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 90 103 4.3E-16 T 13-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 COP00_01350 e34e6ddd919c8022778bcf7817149032 105 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 35 51 4.3E-16 T 13-10-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 COP00_17995 1f19446e76a30d94239ac5aa134e120d 193 Gene3D G3DSA:2.60.60.30 19 187 4.8E-71 T 13-10-2018 COP00_17995 1f19446e76a30d94239ac5aa134e120d 193 Pfam PF02342 TerD domain 1 188 1.6E-84 T 13-10-2018 IPR003325 TerD domain COP00_15390 df912fae09648b23500507ae8c6bfb1d 628 Pfam PF02687 FtsX-like permease family 88 178 3.4E-10 T 13-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 COP00_15390 df912fae09648b23500507ae8c6bfb1d 628 PIRSF PIRSF018968 1 627 5.1E-141 T 13-10-2018 IPR027022 ABC transporter permease protein, BceB-type GO:0055085 COP00_17915 0f8f4060f743136bfebf94a6df87e4af 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 1.5E-38 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_17915 0f8f4060f743136bfebf94a6df87e4af 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 1.5E-38 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_17915 0f8f4060f743136bfebf94a6df87e4af 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 133 149 1.5E-38 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_17915 0f8f4060f743136bfebf94a6df87e4af 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 1.5E-38 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_17915 0f8f4060f743136bfebf94a6df87e4af 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 213 233 1.5E-38 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_17915 0f8f4060f743136bfebf94a6df87e4af 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 1.5E-38 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_17915 0f8f4060f743136bfebf94a6df87e4af 257 SUPERFAMILY SSF51735 6 252 4.38E-81 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily COP00_17915 0f8f4060f743136bfebf94a6df87e4af 257 Gene3D G3DSA:3.40.50.720 1 255 7.0E-79 T 13-10-2018 COP00_17915 0f8f4060f743136bfebf94a6df87e4af 257 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 250 3.1E-65 T 13-10-2018 COP00_17915 0f8f4060f743136bfebf94a6df87e4af 257 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 146 174 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 COP00_17915 0f8f4060f743136bfebf94a6df87e4af 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 159 178 1.1E-11 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_17915 0f8f4060f743136bfebf94a6df87e4af 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 1.1E-11 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_17915 0f8f4060f743136bfebf94a6df87e4af 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 139 147 1.1E-11 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_17845 c860fece96278734ffe2258b3ee1cf15 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 1.8E-35 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_17845 c860fece96278734ffe2258b3ee1cf15 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 1.8E-35 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_17845 c860fece96278734ffe2258b3ee1cf15 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 1.8E-35 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_17845 c860fece96278734ffe2258b3ee1cf15 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 210 230 1.8E-35 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_17845 c860fece96278734ffe2258b3ee1cf15 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 82 93 1.8E-35 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_17845 c860fece96278734ffe2258b3ee1cf15 246 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 1.8E-35 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_17845 c860fece96278734ffe2258b3ee1cf15 246 Gene3D G3DSA:3.40.50.720 2 246 2.5E-78 T 13-10-2018 COP00_17845 c860fece96278734ffe2258b3ee1cf15 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 82 93 5.7E-13 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_17845 c860fece96278734ffe2258b3ee1cf15 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 5.7E-13 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_17845 c860fece96278734ffe2258b3ee1cf15 246 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 5.7E-13 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_17845 c860fece96278734ffe2258b3ee1cf15 246 Pfam PF00106 short chain dehydrogenase 6 200 1.2E-55 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_17845 c860fece96278734ffe2258b3ee1cf15 246 SUPERFAMILY SSF51735 4 246 1.16E-72 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily COP00_17845 c860fece96278734ffe2258b3ee1cf15 246 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 193 0.0037 T 13-10-2018 COP00_17845 c860fece96278734ffe2258b3ee1cf15 246 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 COP00_20095 a109b22fb181dffc82d59420a1de896a 126 Pfam PF03330 Lytic transglycolase 33 119 7.0E-7 T 13-10-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain COP00_00290 e40c5bf00877c9d68ca598325af5752d 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 7.7E-38 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_00290 e40c5bf00877c9d68ca598325af5752d 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 7.7E-38 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_00290 e40c5bf00877c9d68ca598325af5752d 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 211 231 7.7E-38 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_00290 e40c5bf00877c9d68ca598325af5752d 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 7.7E-38 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_00290 e40c5bf00877c9d68ca598325af5752d 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 7.7E-38 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_00290 e40c5bf00877c9d68ca598325af5752d 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 7.7E-38 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_00290 e40c5bf00877c9d68ca598325af5752d 254 Gene3D G3DSA:3.40.50.720 1 250 2.4E-79 T 13-10-2018 COP00_00290 e40c5bf00877c9d68ca598325af5752d 254 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 246 1.3E-57 T 13-10-2018 COP00_00290 e40c5bf00877c9d68ca598325af5752d 254 SUPERFAMILY SSF51735 3 249 3.33E-80 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily COP00_00290 e40c5bf00877c9d68ca598325af5752d 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 8.0E-8 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_00290 e40c5bf00877c9d68ca598325af5752d 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 8.0E-8 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_00290 e40c5bf00877c9d68ca598325af5752d 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 8.0E-8 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_13760 ab7fc14a098ae721da9e7ce71a1e582d 783 Gene3D G3DSA:3.40.228.10 200 421 2.4E-104 T 13-10-2018 COP00_13760 ab7fc14a098ae721da9e7ce71a1e582d 783 PIRSF PIRSF000144 98 763 1.7E-107 T 13-10-2018 COP00_13760 ab7fc14a098ae721da9e7ce71a1e582d 783 Gene3D G3DSA:3.40.50.740 131 613 2.4E-104 T 13-10-2018 COP00_13760 ab7fc14a098ae721da9e7ce71a1e582d 783 SUPERFAMILY SSF53706 116 645 7.07E-125 T 13-10-2018 COP00_13760 ab7fc14a098ae721da9e7ce71a1e582d 783 Gene3D G3DSA:2.40.40.20 654 762 9.5E-8 T 13-10-2018 COP00_13760 ab7fc14a098ae721da9e7ce71a1e582d 783 SUPERFAMILY SSF50692 648 761 2.49E-13 T 13-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily COP00_13760 ab7fc14a098ae721da9e7ce71a1e582d 783 TIGRFAM TIGR01701 Fdhalpha-like: oxidoreductase alpha (molybdopterin) subunit 18 759 6.6E-268 T 13-10-2018 IPR010046 Oxidoreductase alpha (molybdopterin) subunit GO:0008863|GO:0030151|GO:0051539 COP00_13760 ab7fc14a098ae721da9e7ce71a1e582d 783 Pfam PF01568 Molydopterin dinucleotide binding domain 656 751 1.1E-10 T 13-10-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0043546|GO:0055114 COP00_13760 ab7fc14a098ae721da9e7ce71a1e582d 783 Pfam PF00384 Molybdopterin oxidoreductase 124 577 1.8E-39 T 13-10-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 COP00_23895 27fff3fe7f9972f8c2daeb337b502efc 303 SUPERFAMILY SSF54001 171 295 1.42E-36 T 13-10-2018 IPR038765 Papain-like cysteine peptidase superfamily COP00_23895 27fff3fe7f9972f8c2daeb337b502efc 303 Gene3D G3DSA:2.30.30.40 1 111 1.2E-38 T 13-10-2018 COP00_23895 27fff3fe7f9972f8c2daeb337b502efc 303 Gene3D G3DSA:2.30.30.40 112 172 8.0E-10 T 13-10-2018 COP00_23895 27fff3fe7f9972f8c2daeb337b502efc 303 Gene3D G3DSA:3.90.1720.10 173 296 4.7E-34 T 13-10-2018 COP00_23895 27fff3fe7f9972f8c2daeb337b502efc 303 Pfam PF00877 NlpC/P60 family 188 293 1.1E-23 T 13-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain COP00_20020 4361e054dd03815f8e6f42f7979d9528 460 Gene3D G3DSA:3.30.565.40 47 151 9.7E-10 T 13-10-2018 COP00_20020 4361e054dd03815f8e6f42f7979d9528 460 Gene3D G3DSA:3.20.20.370 235 458 3.9E-70 T 13-10-2018 COP00_20020 4361e054dd03815f8e6f42f7979d9528 460 SUPERFAMILY SSF88713 265 454 1.56E-62 T 13-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 COP00_20020 4361e054dd03815f8e6f42f7979d9528 460 Pfam PF01522 Polysaccharide deacetylase 268 379 1.6E-35 T 13-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 COP00_20020 4361e054dd03815f8e6f42f7979d9528 460 Gene3D G3DSA:3.90.640.20 153 234 1.1E-11 T 13-10-2018 IPR037126 PdaC/RsiV-like superfamily COP00_20020 4361e054dd03815f8e6f42f7979d9528 460 PIRSF PIRSF037479 1 460 1.0E-150 T 13-10-2018 IPR017219 Peptidoglycan GlcNAc deacetylase COP00_23805 b32ca2bf2575b1b46b375dd531e40af9 251 SUPERFAMILY SSF56281 8 241 6.94E-51 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like COP00_23805 b32ca2bf2575b1b46b375dd531e40af9 251 Gene3D G3DSA:3.60.15.10 6 251 2.8E-50 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like COP00_23805 b32ca2bf2575b1b46b375dd531e40af9 251 Pfam PF00753 Metallo-beta-lactamase superfamily 24 224 2.1E-29 T 13-10-2018 IPR001279 Metallo-beta-lactamase COP00_23805 b32ca2bf2575b1b46b375dd531e40af9 251 SMART SM00849 22 224 3.1E-33 T 13-10-2018 IPR001279 Metallo-beta-lactamase COP00_11860 95816f1fb98f569f167bec0cb5d69b52 63 Pfam PF01381 Helix-turn-helix 7 60 3.6E-6 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 COP00_11860 95816f1fb98f569f167bec0cb5d69b52 63 SMART SM00530 6 61 6.7E-6 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 COP00_11860 95816f1fb98f569f167bec0cb5d69b52 63 Gene3D G3DSA:1.10.260.40 3 63 1.1E-10 T 13-10-2018 COP00_11860 95816f1fb98f569f167bec0cb5d69b52 63 SUPERFAMILY SSF47413 6 62 2.36E-9 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 COP00_06150 4027d1bd2197af0d25068c5cb7ca74d8 388 Pfam PF13263 PHP-associated 197 242 8.3E-5 T 13-10-2018 COP00_06150 4027d1bd2197af0d25068c5cb7ca74d8 388 SUPERFAMILY SSF89550 2 240 8.44E-13 T 13-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 COP00_06150 4027d1bd2197af0d25068c5cb7ca74d8 388 TIGRFAM TIGR00375 TIGR00375: TIGR00375 family protein 27 385 2.4E-103 T 13-10-2018 IPR005287 Conserved hypothetical protein CHP00375 COP00_06150 4027d1bd2197af0d25068c5cb7ca74d8 388 SUPERFAMILY SSF47781 309 366 6.82E-5 T 13-10-2018 IPR010994 RuvA domain 2-like COP00_06150 4027d1bd2197af0d25068c5cb7ca74d8 388 Gene3D G3DSA:3.20.20.140 1 241 4.8E-13 T 13-10-2018 COP00_06780 bdfb1425edde5a19afff895644a57bed 121 ProDom PD078266 COMPETENCE COMGG LATE MACHINERY OPERON DNA THE PART PRECURSOR PROBABLY 3 121 8.0E-33 T 13-10-2018 IPR020372 Competence operon G protein 7, ComGG COP00_06780 bdfb1425edde5a19afff895644a57bed 121 Pfam PF14173 ComG operon protein 7 31 120 1.1E-18 T 13-10-2018 IPR020372 Competence operon G protein 7, ComGG COP00_15850 3d870a7d16721264bd5406eb13784dc1 95 Pfam PF01250 Ribosomal protein S6 3 92 1.8E-29 T 13-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_15850 3d870a7d16721264bd5406eb13784dc1 95 ProSitePatterns PS01048 Ribosomal protein S6 signature. 44 53 - T 13-10-2018 IPR020815 Ribosomal protein S6, conserved site GO:0003735|GO:0005840|GO:0006412|GO:0019843 COP00_15850 3d870a7d16721264bd5406eb13784dc1 95 Gene3D G3DSA:3.30.70.60 1 95 4.7E-36 T 13-10-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 COP00_15850 3d870a7d16721264bd5406eb13784dc1 95 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 95 23.84 T 13-10-2018 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 COP00_15850 3d870a7d16721264bd5406eb13784dc1 95 SUPERFAMILY SSF54995 1 95 1.57E-34 T 13-10-2018 IPR035980 Ribosomal protein S6 superfamily GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_15850 3d870a7d16721264bd5406eb13784dc1 95 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 94 1.5E-35 T 13-10-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_14925 a0e4233638540c4da13eb6c079a06c0f 468 TIGRFAM TIGR03810 arg_ornith_anti: arginine-ornithine antiporter 5 468 3.3E-215 T 13-10-2018 IPR022461 Arginine/ornithine antiporter GO:0005887|GO:0006527|GO:0043858 COP00_14925 a0e4233638540c4da13eb6c079a06c0f 468 TIGRFAM TIGR00905 2A0302: transporter, basic amino acid/polyamine antiporter (APA) family 1 468 4.6E-195 T 13-10-2018 IPR004754 Amino acid antiporter GO:0006865|GO:0016021 COP00_14925 a0e4233638540c4da13eb6c079a06c0f 468 PIRSF PIRSF006060 1 466 1.4E-53 T 13-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 COP00_14925 a0e4233638540c4da13eb6c079a06c0f 468 Gene3D G3DSA:1.20.1740.10 2 456 1.2E-60 T 13-10-2018 COP00_14925 a0e4233638540c4da13eb6c079a06c0f 468 Pfam PF13520 Amino acid permease 7 407 7.6E-72 T 13-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 COP00_16680 27277bea44417650bb86f3b5b6400d31 209 Gene3D G3DSA:2.40.50.620 33 96 4.6E-15 T 13-10-2018 COP00_16680 27277bea44417650bb86f3b5b6400d31 209 Gene3D G3DSA:2.40.30.10 131 209 1.9E-18 T 13-10-2018 COP00_16680 27277bea44417650bb86f3b5b6400d31 209 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 2 206 39.267 T 13-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_16680 27277bea44417650bb86f3b5b6400d31 209 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 4 203 6.7E-87 T 13-10-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_16680 27277bea44417650bb86f3b5b6400d31 209 ProSitePatterns PS00474 Ribosomal protein L3 signature. 102 125 - T 13-10-2018 IPR019926 Ribosomal protein L3, conserved site COP00_16680 27277bea44417650bb86f3b5b6400d31 209 SUPERFAMILY SSF50447 1 207 4.77E-81 T 13-10-2018 IPR009000 Translation protein, beta-barrel domain superfamily COP00_16680 27277bea44417650bb86f3b5b6400d31 209 Pfam PF00297 Ribosomal protein L3 99 181 4.7E-16 T 13-10-2018 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 COP00_06500 83136d350a881108bb22139802fbd467 330 SUPERFAMILY SSF52518 7 330 1.99E-105 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold COP00_06500 83136d350a881108bb22139802fbd467 330 Pfam PF00676 Dehydrogenase E1 component 20 320 3.0E-107 T 13-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 COP00_06500 83136d350a881108bb22139802fbd467 330 Gene3D G3DSA:3.40.50.970 1 330 3.3E-122 T 13-10-2018 COP00_16355 d9a2fdf6e22ef05ff369d1a3eda61e28 245 Gene3D G3DSA:3.40.50.410 1 240 2.0E-57 T 13-10-2018 IPR036465 von Willebrand factor A-like domain superfamily COP00_16355 d9a2fdf6e22ef05ff369d1a3eda61e28 245 SUPERFAMILY SSF53300 3 71 2.23E-9 T 13-10-2018 IPR036465 von Willebrand factor A-like domain superfamily COP00_16355 d9a2fdf6e22ef05ff369d1a3eda61e28 245 Pfam PF00092 von Willebrand factor type A domain 4 78 2.6E-6 T 13-10-2018 IPR002035 von Willebrand factor, type A COP00_16355 d9a2fdf6e22ef05ff369d1a3eda61e28 245 SUPERFAMILY SSF53300 133 226 7.42E-11 T 13-10-2018 IPR036465 von Willebrand factor A-like domain superfamily COP00_20435 3b71a03f86a74dd1e045822b6a45d70f 957 Gene3D G3DSA:3.40.50.300 760 957 4.6E-38 T 13-10-2018 COP00_20435 3b71a03f86a74dd1e045822b6a45d70f 957 SMART SM00382 264 724 0.0047 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_20435 3b71a03f86a74dd1e045822b6a45d70f 957 Pfam PF13087 AAA domain 747 931 2.9E-28 T 13-10-2018 COP00_20435 3b71a03f86a74dd1e045822b6a45d70f 957 SUPERFAMILY SSF52540 246 939 2.6E-43 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_20435 3b71a03f86a74dd1e045822b6a45d70f 957 Pfam PF13086 AAA domain 249 470 1.5E-8 T 13-10-2018 COP00_18385 3e9e6de9faaa29d7a4a86852cef33efd 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 62 77 2.0E-11 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 COP00_18385 3e9e6de9faaa29d7a4a86852cef33efd 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 111 131 2.0E-11 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 COP00_18385 3e9e6de9faaa29d7a4a86852cef33efd 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 81 97 2.0E-11 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 COP00_18385 3e9e6de9faaa29d7a4a86852cef33efd 150 PRINTS PR00598 Bacterial regulatory protein MarR family signature 45 61 2.0E-11 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 COP00_18385 3e9e6de9faaa29d7a4a86852cef33efd 150 SUPERFAMILY SSF46785 4 142 2.44E-32 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_18385 3e9e6de9faaa29d7a4a86852cef33efd 150 Gene3D G3DSA:1.10.10.10 2 145 1.3E-36 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_18385 3e9e6de9faaa29d7a4a86852cef33efd 150 ProSitePatterns PS01117 MarR-type HTH domain signature. 60 94 - T 13-10-2018 IPR023187 Transcriptional regulator MarR-type, conserved site COP00_18385 3e9e6de9faaa29d7a4a86852cef33efd 150 SMART SM00347 21 121 5.1E-21 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 COP00_18385 3e9e6de9faaa29d7a4a86852cef33efd 150 Pfam PF01047 MarR family 28 85 2.3E-14 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 COP00_04565 6bbb9bd70b0e0b61e181c541d2a65fca 177 Pfam PF04238 Protein of unknown function (DUF420) 45 173 4.8E-47 T 13-10-2018 IPR007352 Protein of unknown function DUF420 COP00_24015 c4c612ca33c93f67264a4a9e007ee2ea 110 SMART SM00422 14 82 4.2E-23 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 COP00_24015 c4c612ca33c93f67264a4a9e007ee2ea 110 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 49 69 2.0E-5 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 COP00_24015 c4c612ca33c93f67264a4a9e007ee2ea 110 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 15 26 2.0E-5 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 COP00_24015 c4c612ca33c93f67264a4a9e007ee2ea 110 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 26 39 2.0E-5 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 COP00_24015 c4c612ca33c93f67264a4a9e007ee2ea 110 SUPERFAMILY SSF46955 15 106 2.29E-18 T 13-10-2018 IPR009061 Putative DNA-binding domain superfamily COP00_24015 c4c612ca33c93f67264a4a9e007ee2ea 110 Pfam PF13411 MerR HTH family regulatory protein 15 76 7.4E-15 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 COP00_24015 c4c612ca33c93f67264a4a9e007ee2ea 110 Gene3D G3DSA:1.10.1660.10 6 89 1.6E-22 T 13-10-2018 COP00_10455 ce6239d71bdff88e1309e0f1c2667b66 143 TIGRFAM TIGR00943 2a6301s02: monovalent cation:proton antiporter 29 135 6.2E-43 T 13-10-2018 IPR005281 Monovalent cation:proton antiporter, subunit B GO:0006812|GO:0008324|GO:0016021 COP00_10455 ce6239d71bdff88e1309e0f1c2667b66 143 Pfam PF04039 Domain related to MnhB subunit of Na+/H+ antiporter 10 134 2.1E-34 T 13-10-2018 IPR007182 Na+/H+ antiporter MnhB subunit-related protein COP00_13650 c24cd4f4469ecd3d4cfd07e70e477674 172 Pfam PF13420 Acetyltransferase (GNAT) domain 3 154 1.8E-15 T 13-10-2018 COP00_13650 c24cd4f4469ecd3d4cfd07e70e477674 172 Gene3D G3DSA:3.40.630.30 1 169 1.2E-44 T 13-10-2018 COP00_13650 c24cd4f4469ecd3d4cfd07e70e477674 172 SUPERFAMILY SSF55729 1 163 6.03E-32 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase COP00_15185 1d84dbae94381bdba95bc0875ae94111 393 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 9 81 5.5E-20 T 13-10-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 COP00_15185 1d84dbae94381bdba95bc0875ae94111 393 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 192 392 1.2E-61 T 13-10-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 COP00_15185 1d84dbae94381bdba95bc0875ae94111 393 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 4 392 1.3E-140 T 13-10-2018 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: R-HSA-83936 COP00_16335 87f86038091ed659144b3737cb6f6130 128 SUPERFAMILY SSF50249 4 83 2.35E-25 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold COP00_16335 87f86038091ed659144b3737cb6f6130 128 Gene3D G3DSA:2.40.50.140 1 84 2.8E-29 T 13-10-2018 COP00_16335 87f86038091ed659144b3737cb6f6130 128 Pfam PF00575 S1 RNA binding domain 4 74 3.5E-22 T 13-10-2018 IPR003029 S1 domain GO:0003676 COP00_16335 87f86038091ed659144b3737cb6f6130 128 SMART SM00316 4 74 1.1E-26 T 13-10-2018 IPR022967 RNA-binding domain, S1 COP00_14165 6f3afae13fc6257cf8749131df96f506 180 Gene3D G3DSA:2.60.40.3490 42 171 4.2E-55 T 13-10-2018 IPR038480 YuaB-like superfamily COP00_14165 6f3afae13fc6257cf8749131df96f506 180 ProDom PD034110 YWEA MEMBRANE YUAB TRANSMEMBRANE ORF-1 1 169 3.0E-81 T 13-10-2018 IPR034650 YuaB-like COP00_17395 2505abab62eeacdc8bdfa6a25b89784b 61 Gene3D G3DSA:3.40.30.10 5 61 2.1E-27 T 13-10-2018 COP00_17395 2505abab62eeacdc8bdfa6a25b89784b 61 Pfam PF03190 Protein of unknown function, DUF255 8 59 9.4E-27 T 13-10-2018 IPR004879 Domain of unknown function DUF255 COP00_17395 2505abab62eeacdc8bdfa6a25b89784b 61 SUPERFAMILY SSF52833 4 59 3.88E-17 T 13-10-2018 IPR036249 Thioredoxin-like superfamily COP00_04720 1e2daf3562511f5e5fd75b02bcb0ce05 207 Pfam PF01810 LysE type translocator 15 204 9.8E-35 T 13-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 COP00_04720 1e2daf3562511f5e5fd75b02bcb0ce05 207 PIRSF PIRSF006324 1 207 1.1E-56 T 13-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 COP00_15605 b9c1f1093602dc68b7fcc44ead7c297a 103 SUPERFAMILY SSF101386 3 101 1.89E-33 T 13-10-2018 COP00_15605 b9c1f1093602dc68b7fcc44ead7c297a 103 Pfam PF12643 MazG-like family 31 102 1.4E-22 T 13-10-2018 IPR025984 dCTP pyrophosphatase 1 GO:0009143|GO:0047429 KEGG: 00240+3.6.1.12|Reactome: R-HSA-499943 COP00_15605 b9c1f1093602dc68b7fcc44ead7c297a 103 Gene3D G3DSA:1.10.287.1080 1 102 7.6E-32 T 13-10-2018 COP00_15605 b9c1f1093602dc68b7fcc44ead7c297a 103 PIRSF PIRSF029826 1 103 1.0E-37 T 13-10-2018 IPR025984 dCTP pyrophosphatase 1 GO:0009143|GO:0047429 KEGG: 00240+3.6.1.12|Reactome: R-HSA-499943 COP00_06680 8c0826c35b8f55a12cd9db64b3edb29c 143 TIGRFAM TIGR01088 aroQ: 3-dehydroquinate dehydratase, type II 3 141 1.1E-63 T 13-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 COP00_06680 8c0826c35b8f55a12cd9db64b3edb29c 143 Pfam PF01220 Dehydroquinase class II 3 139 2.3E-59 T 13-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 COP00_06680 8c0826c35b8f55a12cd9db64b3edb29c 143 Hamap MF_00169 3-dehydroquinate dehydratase [aroQ]. 1 143 62.95 T 13-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 COP00_06680 8c0826c35b8f55a12cd9db64b3edb29c 143 SUPERFAMILY SSF52304 3 141 2.22E-57 T 13-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 COP00_06680 8c0826c35b8f55a12cd9db64b3edb29c 143 Gene3D G3DSA:3.40.50.9100 1 143 1.7E-63 T 13-10-2018 IPR036441 Dehydroquinase, class II superfamily GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 COP00_06680 8c0826c35b8f55a12cd9db64b3edb29c 143 PIRSF PIRSF001399 1 143 9.2E-62 T 13-10-2018 IPR001874 Dehydroquinase, class II GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 COP00_06680 8c0826c35b8f55a12cd9db64b3edb29c 143 ProDom PD004527 LYASE II 3-DEHYDROQUINATE BIOSYNTHESIS DEHYDRATASE TYPE 3-DEHYDROQUINASE DHQASE AMINO AROMATIC 4 143 8.0E-68 T 13-10-2018 COP00_06680 8c0826c35b8f55a12cd9db64b3edb29c 143 ProSitePatterns PS01029 Dehydroquinase class II signature. 7 24 - T 13-10-2018 IPR018509 Dehydroquinase, class II, conserved site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 COP00_07745 c37e765473bc4e7fa5268c1b78683a3d 341 SMART SM00342 245 327 3.7E-25 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 COP00_07745 c37e765473bc4e7fa5268c1b78683a3d 341 Pfam PF12833 Helix-turn-helix domain 252 328 4.3E-22 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 COP00_07745 c37e765473bc4e7fa5268c1b78683a3d 341 Gene3D G3DSA:1.10.10.60 225 333 7.2E-25 T 13-10-2018 COP00_07745 c37e765473bc4e7fa5268c1b78683a3d 341 Pfam PF12625 Arabinose-binding domain of AraC transcription regulator, N-term 21 201 1.7E-22 T 13-10-2018 IPR032687 HTH-type transcriptional regulator AraC-type, N-terminal COP00_07745 c37e765473bc4e7fa5268c1b78683a3d 341 SUPERFAMILY SSF46689 280 330 1.15E-11 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 COP00_12605 9a9324e07bfbaba6cf5e5a70a4c6e3e3 748 Gene3D G3DSA:1.20.1060.10 331 438 1.8E-19 T 13-10-2018 COP00_12605 9a9324e07bfbaba6cf5e5a70a4c6e3e3 748 Pfam PF00476 DNA polymerase family A 341 710 5.1E-77 T 13-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 COP00_12605 9a9324e07bfbaba6cf5e5a70a4c6e3e3 748 Gene3D G3DSA:1.10.150.20 485 632 1.1E-62 T 13-10-2018 COP00_12605 9a9324e07bfbaba6cf5e5a70a4c6e3e3 748 Gene3D G3DSA:3.30.70.370 443 709 1.1E-62 T 13-10-2018 COP00_12605 9a9324e07bfbaba6cf5e5a70a4c6e3e3 748 SMART SM00474 122 305 5.0E-11 T 13-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 COP00_12605 9a9324e07bfbaba6cf5e5a70a4c6e3e3 748 SMART SM00482 462 676 3.7E-33 T 13-10-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 COP00_12605 9a9324e07bfbaba6cf5e5a70a4c6e3e3 748 Gene3D G3DSA:3.30.420.10 119 329 1.5E-52 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 COP00_12605 9a9324e07bfbaba6cf5e5a70a4c6e3e3 748 SUPERFAMILY SSF53098 119 306 3.04E-35 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily COP00_12605 9a9324e07bfbaba6cf5e5a70a4c6e3e3 748 ProSitePatterns PS00447 DNA polymerase family A signature. 532 551 - T 13-10-2018 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 COP00_12605 9a9324e07bfbaba6cf5e5a70a4c6e3e3 748 Pfam PF01612 3'-5' exonuclease 124 299 7.4E-22 T 13-10-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 COP00_12605 9a9324e07bfbaba6cf5e5a70a4c6e3e3 748 PRINTS PR00868 DNA-polymerase family A (pol I) signature 435 457 3.2E-14 T 13-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 COP00_12605 9a9324e07bfbaba6cf5e5a70a4c6e3e3 748 PRINTS PR00868 DNA-polymerase family A (pol I) signature 625 641 3.2E-14 T 13-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 COP00_12605 9a9324e07bfbaba6cf5e5a70a4c6e3e3 748 PRINTS PR00868 DNA-polymerase family A (pol I) signature 532 557 3.2E-14 T 13-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 COP00_12605 9a9324e07bfbaba6cf5e5a70a4c6e3e3 748 PRINTS PR00868 DNA-polymerase family A (pol I) signature 569 580 3.2E-14 T 13-10-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 COP00_12605 9a9324e07bfbaba6cf5e5a70a4c6e3e3 748 SUPERFAMILY SSF56672 310 710 3.11E-91 T 13-10-2018 COP00_15870 96251ad24955762ee5e28ba3b9054d0c 205 Pfam PF06866 Protein of unknown function (DUF1256) 17 179 3.9E-68 T 13-10-2018 IPR009665 Protein of unknown function DUF1256 COP00_15870 96251ad24955762ee5e28ba3b9054d0c 205 TIGRFAM TIGR02841 spore_YyaC: putative sporulation protein YyaC 43 181 5.7E-69 T 13-10-2018 IPR009665 Protein of unknown function DUF1256 COP00_15870 96251ad24955762ee5e28ba3b9054d0c 205 ProDom PD041835 PROTEASE GERMINATION HYDROLASE SPORE GPR ENDOPEPTIDASE PROTEINASE ZYMOGEN PRECURSOR PEPTIDASE 1 140 0.003 T 13-10-2018 IPR005080 Peptidase A25, germination protease GO:0006508|GO:0008233|GO:0009847 COP00_15870 96251ad24955762ee5e28ba3b9054d0c 205 SUPERFAMILY SSF53163 16 188 2.38E-56 T 13-10-2018 IPR023430 Peptidase HybD-like domain superfamily COP00_00365 9803bd5a06a9a3f993620a84b74f4543 152 SUPERFAMILY SSF52833 2 141 1.65E-32 T 13-10-2018 IPR036249 Thioredoxin-like superfamily COP00_00365 9803bd5a06a9a3f993620a84b74f4543 152 Pfam PF00578 AhpC/TSA family 5 125 2.1E-12 T 13-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 COP00_00365 9803bd5a06a9a3f993620a84b74f4543 152 Gene3D G3DSA:3.40.30.10 1 148 7.4E-39 T 13-10-2018 COP00_07520 c844256255fca5dd3926e16a116716fa 281 Gene3D G3DSA:3.20.80.10 130 280 6.5E-55 T 13-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily COP00_07520 c844256255fca5dd3926e16a116716fa 281 SUPERFAMILY SSF55136 125 279 2.88E-46 T 13-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily COP00_07520 c844256255fca5dd3926e16a116716fa 281 SMART SM00422 5 75 3.3E-13 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 COP00_07520 c844256255fca5dd3926e16a116716fa 281 Gene3D G3DSA:1.10.1660.10 3 129 1.1E-22 T 13-10-2018 COP00_07520 c844256255fca5dd3926e16a116716fa 281 Pfam PF13411 MerR HTH family regulatory protein 5 73 4.3E-12 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 COP00_07520 c844256255fca5dd3926e16a116716fa 281 SUPERFAMILY SSF46955 3 109 4.76E-25 T 13-10-2018 IPR009061 Putative DNA-binding domain superfamily COP00_01680 37ef64bdcfb7d4e7ba26badb8e8f7d36 241 SMART SM00866 95 233 4.1E-24 T 13-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 COP00_01680 37ef64bdcfb7d4e7ba26badb8e8f7d36 241 SMART SM00345 14 73 2.2E-18 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 COP00_01680 37ef64bdcfb7d4e7ba26badb8e8f7d36 241 Gene3D G3DSA:3.40.1410.10 78 239 2.0E-28 T 13-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily COP00_01680 37ef64bdcfb7d4e7ba26badb8e8f7d36 241 SUPERFAMILY SSF64288 62 239 2.51E-37 T 13-10-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain superfamily COP00_01680 37ef64bdcfb7d4e7ba26badb8e8f7d36 241 Gene3D G3DSA:1.10.10.10 2 77 2.1E-20 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_01680 37ef64bdcfb7d4e7ba26badb8e8f7d36 241 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 47 63 4.3E-7 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 COP00_01680 37ef64bdcfb7d4e7ba26badb8e8f7d36 241 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 33 47 4.3E-7 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 COP00_01680 37ef64bdcfb7d4e7ba26badb8e8f7d36 241 Pfam PF07702 UTRA domain 97 233 6.8E-30 T 13-10-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 COP00_01680 37ef64bdcfb7d4e7ba26badb8e8f7d36 241 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 73 1.3E-17 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 COP00_01680 37ef64bdcfb7d4e7ba26badb8e8f7d36 241 SUPERFAMILY SSF46785 6 84 2.73E-19 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_03535 d170a43d3835b5b713059f9a0811c689 201 Gene3D G3DSA:1.10.357.10 1 189 2.7E-37 T 13-10-2018 COP00_03535 d170a43d3835b5b713059f9a0811c689 201 SUPERFAMILY SSF48498 94 186 8.07E-14 T 13-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily COP00_03535 d170a43d3835b5b713059f9a0811c689 201 SUPERFAMILY SSF46689 2 66 1.75E-19 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 COP00_03535 d170a43d3835b5b713059f9a0811c689 201 Pfam PF13977 BetI-type transcriptional repressor, C-terminal 88 180 8.7E-9 T 13-10-2018 IPR039538 BetI-type transcriptional repressor, C-terminal COP00_03535 d170a43d3835b5b713059f9a0811c689 201 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 7.0E-10 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 COP00_03535 d170a43d3835b5b713059f9a0811c689 201 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 12 25 7.0E-10 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 COP00_03535 d170a43d3835b5b713059f9a0811c689 201 Pfam PF00440 Bacterial regulatory proteins, tetR family 12 57 1.1E-19 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 COP00_20665 3ed47e0d9c5d5b8320411c9c0cf6b6e2 212 Pfam PF07853 Protein of unknown function (DUF1648) 10 50 1.6E-14 T 13-10-2018 IPR012867 Domain of unknown function DUF1648 COP00_20665 3ed47e0d9c5d5b8320411c9c0cf6b6e2 212 Pfam PF13630 SdpI/YhfL protein family 134 200 1.7E-17 T 13-10-2018 IPR025962 SdpI/YhfL protein family COP00_20665 3ed47e0d9c5d5b8320411c9c0cf6b6e2 212 PIRSF PIRSF038959 1 211 2.5E-45 T 13-10-2018 IPR026272 Immunity protein SdpI COP00_17430 1fd76ce8b1e7e2e8fda4efd341d105a2 88 SUPERFAMILY SSF50044 51 84 4.23E-6 T 13-10-2018 IPR036028 SH3-like domain superfamily GO:0005515 COP00_17430 1fd76ce8b1e7e2e8fda4efd341d105a2 88 Pfam PF08239 Bacterial SH3 domain 34 84 3.7E-16 T 13-10-2018 IPR003646 SH3-like domain, bacterial-type COP00_17430 1fd76ce8b1e7e2e8fda4efd341d105a2 88 Gene3D G3DSA:2.30.30.40 29 85 2.4E-18 T 13-10-2018 COP00_17430 1fd76ce8b1e7e2e8fda4efd341d105a2 88 SMART SM00287 26 88 2.6E-12 T 13-10-2018 IPR003646 SH3-like domain, bacterial-type COP00_08065 249b8a5963b29c6f5d663b4052bb7d3c 213 Pfam PF13649 Methyltransferase domain 49 140 2.7E-12 T 13-10-2018 COP00_08065 249b8a5963b29c6f5d663b4052bb7d3c 213 Hamap MF_02100 Uncharacterized methyltransferase . 2 213 45.715 T 13-10-2018 IPR023553 Uncharacterised methyltransferase, YrrT GO:0008168 COP00_08065 249b8a5963b29c6f5d663b4052bb7d3c 213 Gene3D G3DSA:3.40.50.150 24 213 1.3E-45 T 13-10-2018 COP00_08065 249b8a5963b29c6f5d663b4052bb7d3c 213 SUPERFAMILY SSF53335 8 198 4.91E-28 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase COP00_02205 d5df8807efa1bef85e53e9fb4922ff6d 637 Pfam PF04740 LXG domain of WXG superfamily 2 201 8.2E-69 T 13-10-2018 IPR006829 LXG domain COP00_02205 d5df8807efa1bef85e53e9fb4922ff6d 637 Pfam PF14411 A nuclease of the HNH/ENDO VII superfamily with conserved LHH 546 627 3.2E-28 T 13-10-2018 IPR026834 LHH COP00_11925 8a8c533defb7f429642f3a441dc850b7 225 Gene3D G3DSA:1.10.3720.10 14 210 2.5E-31 T 13-10-2018 IPR035906 MetI-like superfamily COP00_11925 8a8c533defb7f429642f3a441dc850b7 225 SUPERFAMILY SSF161098 16 200 5.36E-35 T 13-10-2018 IPR035906 MetI-like superfamily COP00_11925 8a8c533defb7f429642f3a441dc850b7 225 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 40 207 1.2E-21 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 COP00_13550 88565cc6d9d1c9fb2123bac161f061aa 275 SUPERFAMILY SSF117143 95 236 1.2E-11 T 13-10-2018 IPR037925 Flagellar hook-basal body protein, FlgE/F/G-like COP00_13550 88565cc6d9d1c9fb2123bac161f061aa 275 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 194 272 1.5E-19 T 13-10-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain COP00_13550 88565cc6d9d1c9fb2123bac161f061aa 275 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 138 257 2.7E-21 T 13-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G COP00_13550 88565cc6d9d1c9fb2123bac161f061aa 275 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 144 3.0E-23 T 13-10-2018 IPR020013 Flagellar hook-basal body protein, FlgE/F/G COP00_13550 88565cc6d9d1c9fb2123bac161f061aa 275 Pfam PF00460 Flagella basal body rod protein 7 35 3.5E-7 T 13-10-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 COP00_02015 5f3749ed3875aa106a54c829f96ff800 216 Pfam PF09335 SNARE associated Golgi protein 53 171 1.5E-26 T 13-10-2018 IPR032816 SNARE associated Golgi protein COP00_11935 97a4e82cc15dbb5c5f32e92ccfc3465d 217 SUPERFAMILY SSF161098 13 200 4.45E-41 T 13-10-2018 IPR035906 MetI-like superfamily COP00_11935 97a4e82cc15dbb5c5f32e92ccfc3465d 217 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 37 195 8.1E-24 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 COP00_11935 97a4e82cc15dbb5c5f32e92ccfc3465d 217 Gene3D G3DSA:1.10.3720.10 14 206 2.3E-35 T 13-10-2018 IPR035906 MetI-like superfamily COP00_04925 8f9a129987cc2c30398b87df508bd396 197 SUPERFAMILY SSF49329 46 190 5.76E-39 T 13-10-2018 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 COP00_04925 8f9a129987cc2c30398b87df508bd396 197 Pfam PF00080 Copper/zinc superoxide dismutase (SODC) 54 190 3.7E-37 T 13-10-2018 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 COP00_04925 8f9a129987cc2c30398b87df508bd396 197 Gene3D G3DSA:2.60.40.200 44 196 3.7E-56 T 13-10-2018 IPR036423 Superoxide dismutase-like, copper/zinc binding domain superfamily GO:0006801|GO:0046872 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 COP00_22690 e376f03a3975fb810a32892b25abf633 326 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 165 177 - T 13-10-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 COP00_22690 e376f03a3975fb810a32892b25abf633 326 TIGRFAM TIGR01306 GMP_reduct_2: guanosine monophosphate reductase 4 324 2.7E-203 T 13-10-2018 IPR005994 Guanosine monophosphate reductase, type2 GO:0003920|GO:0006163|GO:1902560 KEGG: 00230+1.7.1.7 COP00_22690 e376f03a3975fb810a32892b25abf633 326 SMART SM01240 3 326 6.2E-113 T 13-10-2018 COP00_22690 e376f03a3975fb810a32892b25abf633 326 PIRSF PIRSF036500 1 326 1.6E-195 T 13-10-2018 IPR005994 Guanosine monophosphate reductase, type2 GO:0003920|GO:0006163|GO:1902560 KEGG: 00230+1.7.1.7 COP00_22690 e376f03a3975fb810a32892b25abf633 326 Gene3D G3DSA:3.20.20.70 1 326 6.8E-110 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 COP00_22690 e376f03a3975fb810a32892b25abf633 326 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 6 310 4.2E-70 T 13-10-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 COP00_22690 e376f03a3975fb810a32892b25abf633 326 Hamap MF_01511 GMP reductase [guaC]. 2 325 64.361 T 13-10-2018 IPR005994 Guanosine monophosphate reductase, type2 GO:0003920|GO:0006163|GO:1902560 KEGG: 00230+1.7.1.7 COP00_22690 e376f03a3975fb810a32892b25abf633 326 SUPERFAMILY SSF51412 3 315 6.41E-92 T 13-10-2018 COP00_10045 767133e2a4085b05dbaf627c4f9c87fa 130 SUPERFAMILY SSF69118 3 120 6.91E-35 T 13-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 COP00_10045 767133e2a4085b05dbaf627c4f9c87fa 130 Pfam PF02627 Carboxymuconolactone decarboxylase family 33 118 2.2E-21 T 13-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 COP00_10045 767133e2a4085b05dbaf627c4f9c87fa 130 Gene3D G3DSA:1.20.1290.10 3 127 9.3E-41 T 13-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 COP00_07140 0db70b888de7871d65dcd2ed0d4b4512 241 Pfam PF04493 Endonuclease V 23 223 4.0E-60 T 13-10-2018 IPR007581 Endonuclease V GO:0004519|GO:0006281 COP00_07140 0db70b888de7871d65dcd2ed0d4b4512 241 Hamap MF_00801 Endonuclease V [nfi]. 13 233 31.644 T 13-10-2018 IPR007581 Endonuclease V GO:0004519|GO:0006281 COP00_07140 0db70b888de7871d65dcd2ed0d4b4512 241 Gene3D G3DSA:3.30.2170.10 1 241 2.0E-79 T 13-10-2018 COP00_00080 ca4a455ebbead28a1a16cc58bb8a0fab 73 Pfam PF09693 Phage uncharacterised protein (Phage_XkdX) 5 44 1.7E-15 T 13-10-2018 IPR010022 Protein of unknown function XkdX COP00_00080 ca4a455ebbead28a1a16cc58bb8a0fab 73 TIGRFAM TIGR01669 phage_XkdX: phage uncharacterized protein, XkdX family 2 44 2.9E-9 T 13-10-2018 IPR010022 Protein of unknown function XkdX COP00_16405 b09ea8de4349471cf3df078fa46af715 194 SUPERFAMILY SSF52317 1 190 1.06E-56 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like COP00_16405 b09ea8de4349471cf3df078fa46af715 194 Gene3D G3DSA:3.40.50.880 1 190 6.4E-62 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like COP00_16405 b09ea8de4349471cf3df078fa46af715 194 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 186 9.0E-90 T 13-10-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 COP00_16405 b09ea8de4349471cf3df078fa46af715 194 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 4.0E-13 T 13-10-2018 COP00_16405 b09ea8de4349471cf3df078fa46af715 194 PRINTS PR00096 Glutamine amidotransferase superfamily signature 164 177 4.0E-13 T 13-10-2018 COP00_16405 b09ea8de4349471cf3df078fa46af715 194 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 4.0E-13 T 13-10-2018 COP00_16405 b09ea8de4349471cf3df078fa46af715 194 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 44 58 7.4E-7 T 13-10-2018 COP00_16405 b09ea8de4349471cf3df078fa46af715 194 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 74 90 7.4E-7 T 13-10-2018 COP00_16405 b09ea8de4349471cf3df078fa46af715 194 Pfam PF00117 Glutamine amidotransferase class-I 4 185 1.2E-55 T 13-10-2018 IPR017926 Glutamine amidotransferase COP00_16405 b09ea8de4349471cf3df078fa46af715 194 PRINTS PR00097 Anthranilate synthase component II signature 74 85 8.3E-36 T 13-10-2018 COP00_16405 b09ea8de4349471cf3df078fa46af715 194 PRINTS PR00097 Anthranilate synthase component II signature 47 56 8.3E-36 T 13-10-2018 COP00_16405 b09ea8de4349471cf3df078fa46af715 194 PRINTS PR00097 Anthranilate synthase component II signature 2 16 8.3E-36 T 13-10-2018 COP00_16405 b09ea8de4349471cf3df078fa46af715 194 PRINTS PR00097 Anthranilate synthase component II signature 164 177 8.3E-36 T 13-10-2018 COP00_16405 b09ea8de4349471cf3df078fa46af715 194 PRINTS PR00097 Anthranilate synthase component II signature 119 131 8.3E-36 T 13-10-2018 COP00_16405 b09ea8de4349471cf3df078fa46af715 194 PRINTS PR00097 Anthranilate synthase component II signature 99 107 8.3E-36 T 13-10-2018 COP00_21560 d7008b4b11d9173278c2fb839278e1fb 461 Pfam PF00375 Sodium:dicarboxylate symporter family 31 440 1.6E-98 T 13-10-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 COP00_21560 d7008b4b11d9173278c2fb839278e1fb 461 PRINTS PR00173 Glutamate-aspartate symporter signature 75 95 3.5E-18 T 13-10-2018 COP00_21560 d7008b4b11d9173278c2fb839278e1fb 461 PRINTS PR00173 Glutamate-aspartate symporter signature 27 47 3.5E-18 T 13-10-2018 COP00_21560 d7008b4b11d9173278c2fb839278e1fb 461 PRINTS PR00173 Glutamate-aspartate symporter signature 105 130 3.5E-18 T 13-10-2018 COP00_21560 d7008b4b11d9173278c2fb839278e1fb 461 PRINTS PR00173 Glutamate-aspartate symporter signature 395 415 3.5E-18 T 13-10-2018 COP00_21560 d7008b4b11d9173278c2fb839278e1fb 461 PRINTS PR00173 Glutamate-aspartate symporter signature 232 251 3.5E-18 T 13-10-2018 COP00_21560 d7008b4b11d9173278c2fb839278e1fb 461 PRINTS PR00173 Glutamate-aspartate symporter signature 368 387 3.5E-18 T 13-10-2018 COP00_21560 d7008b4b11d9173278c2fb839278e1fb 461 Gene3D G3DSA:1.10.3860.10 5 458 1.4E-98 T 13-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 COP00_21560 d7008b4b11d9173278c2fb839278e1fb 461 SUPERFAMILY SSF118215 29 440 1.26E-90 T 13-10-2018 IPR036458 Sodium:dicarboxylate symporter superfamily GO:0015293|GO:0016021 COP00_19900 65d95c561700c0f82253fd63d9f1aa82 68 Pfam PF07870 Protein of unknown function (DUF1657) 7 55 8.4E-15 T 13-10-2018 IPR012452 Protein of unknown function DUF1657 COP00_18225 dd762d84a1d5ccca0fac93e702da4d92 269 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 29 52 - T 13-10-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 COP00_18225 dd762d84a1d5ccca0fac93e702da4d92 269 Gene3D G3DSA:1.10.510.10 14 252 5.4E-38 T 13-10-2018 COP00_18225 dd762d84a1d5ccca0fac93e702da4d92 269 SMART SM00219 23 225 4.6E-4 T 13-10-2018 IPR020635 Tyrosine-protein kinase, catalytic domain GO:0004713|GO:0006468 COP00_18225 dd762d84a1d5ccca0fac93e702da4d92 269 Pfam PF00069 Protein kinase domain 23 224 1.2E-26 T 13-10-2018 IPR000719 Protein kinase domain GO:0004672|GO:0005524|GO:0006468 COP00_18225 dd762d84a1d5ccca0fac93e702da4d92 269 SUPERFAMILY SSF56112 12 243 6.7E-44 T 13-10-2018 IPR011009 Protein kinase-like domain superfamily COP00_07655 2d233519b6feaba5082baf633cf405f4 86 Pfam PF02583 Metal-sensitive transcriptional repressor 5 82 5.0E-24 T 13-10-2018 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 COP00_07655 2d233519b6feaba5082baf633cf405f4 86 Gene3D G3DSA:1.20.58.1000 1 85 1.1E-22 T 13-10-2018 IPR038390 Metal-sensitive transcriptional repressor superfamily COP00_20420 aab2d9a16edcc2115ed252888f39af5b 470 Gene3D G3DSA:1.20.1730.10 25 469 1.2E-59 T 13-10-2018 IPR038377 Sodium/glucose symporter superfamily COP00_20420 aab2d9a16edcc2115ed252888f39af5b 470 Pfam PF00474 Sodium:solute symporter family 41 397 9.8E-24 T 13-10-2018 IPR001734 Sodium/solute symporter GO:0016020|GO:0022857|GO:0055085 COP00_06180 bc2d0c9f4cc3d2f64138ccd5ed834ad2 419 SUPERFAMILY SSF103473 19 414 6.54E-41 T 13-10-2018 IPR036259 MFS transporter superfamily COP00_06180 bc2d0c9f4cc3d2f64138ccd5ed834ad2 419 Pfam PF07690 Major Facilitator Superfamily 43 380 2.3E-23 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 COP00_06180 bc2d0c9f4cc3d2f64138ccd5ed834ad2 419 Gene3D G3DSA:1.20.1250.20 18 413 8.1E-35 T 13-10-2018 COP00_11895 e995d0f72759ae4f230a8401939eb0fb 248 Gene3D G3DSA:3.40.50.1820 1 246 1.6E-62 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold COP00_11895 e995d0f72759ae4f230a8401939eb0fb 248 SUPERFAMILY SSF53474 12 245 1.17E-37 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold COP00_11895 e995d0f72759ae4f230a8401939eb0fb 248 PIRSF PIRSF017388 1 246 5.1E-99 T 13-10-2018 IPR012354 Esterase/lipase GO:0052689 COP00_11895 e995d0f72759ae4f230a8401939eb0fb 248 Pfam PF12146 Serine aminopeptidase, S33 15 229 6.7E-18 T 13-10-2018 IPR022742 Serine aminopeptidase, S33 COP00_20810 b94cc1066b5a97a5c690cf178bd6d8d4 124 ProDom PD015812 YOPD YWLA YOAG 10 122 1.0E-9 T 13-10-2018 IPR031374 Uncharacterised protein family UPF0715 COP00_20810 b94cc1066b5a97a5c690cf178bd6d8d4 124 Pfam PF17094 Uncharacterised protein family (UPF0715) 10 121 1.6E-28 T 13-10-2018 IPR031374 Uncharacterised protein family UPF0715 COP00_24300 70ce9b6351400a307abae2f5bc64214a 211 SUPERFAMILY SSF88946 9 107 1.24E-6 T 13-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 COP00_24300 70ce9b6351400a307abae2f5bc64214a 211 Pfam PF04542 Sigma-70 region 2 27 92 9.1E-5 T 13-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 COP00_22305 ef0129b88f2a84be1f958ae93dfae740 320 Gene3D G3DSA:3.40.50.1980 30 140 6.9E-33 T 13-10-2018 COP00_22305 ef0129b88f2a84be1f958ae93dfae740 320 Gene3D G3DSA:3.40.50.1980 141 318 1.3E-44 T 13-10-2018 COP00_22305 ef0129b88f2a84be1f958ae93dfae740 320 SUPERFAMILY SSF53807 36 314 2.51E-61 T 13-10-2018 COP00_22305 ef0129b88f2a84be1f958ae93dfae740 320 Pfam PF01497 Periplasmic binding protein 54 294 5.4E-35 T 13-10-2018 IPR002491 ABC transporter periplasmic binding domain COP00_18195 b1ca3dd19707ce576a09ac3a0084f93b 313 Gene3D G3DSA:3.40.50.1980 145 311 2.1E-55 T 13-10-2018 COP00_18195 b1ca3dd19707ce576a09ac3a0084f93b 313 SUPERFAMILY SSF53807 55 308 2.67E-64 T 13-10-2018 COP00_18195 b1ca3dd19707ce576a09ac3a0084f93b 313 Gene3D G3DSA:3.40.50.1980 35 144 3.7E-26 T 13-10-2018 COP00_18195 b1ca3dd19707ce576a09ac3a0084f93b 313 Pfam PF01497 Periplasmic binding protein 59 287 1.6E-39 T 13-10-2018 IPR002491 ABC transporter periplasmic binding domain COP00_12930 cb206d32a17f308285f20e1f6d7f91f2 523 Gene3D G3DSA:1.20.1250.20 271 434 4.1E-19 T 13-10-2018 COP00_12930 cb206d32a17f308285f20e1f6d7f91f2 523 Gene3D G3DSA:1.20.1720.10 16 223 2.6E-44 T 13-10-2018 COP00_12930 cb206d32a17f308285f20e1f6d7f91f2 523 Pfam PF07690 Major Facilitator Superfamily 21 417 3.4E-50 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 COP00_12930 cb206d32a17f308285f20e1f6d7f91f2 523 ProSitePatterns PS00216 Sugar transport proteins signature 1. 69 84 - T 13-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 COP00_12930 cb206d32a17f308285f20e1f6d7f91f2 523 PRINTS PR01036 Tetracycline resistance protein TetB signature 78 100 3.4E-5 T 13-10-2018 COP00_12930 cb206d32a17f308285f20e1f6d7f91f2 523 PRINTS PR01036 Tetracycline resistance protein TetB signature 205 223 3.4E-5 T 13-10-2018 COP00_12930 cb206d32a17f308285f20e1f6d7f91f2 523 PRINTS PR01036 Tetracycline resistance protein TetB signature 139 163 3.4E-5 T 13-10-2018 COP00_12930 cb206d32a17f308285f20e1f6d7f91f2 523 SUPERFAMILY SSF103473 9 513 2.22E-68 T 13-10-2018 IPR036259 MFS transporter superfamily COP00_20800 6e16bdfe957b053e07f85dac432f9315 122 Gene3D G3DSA:1.10.10.10 5 121 4.6E-43 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_20800 6e16bdfe957b053e07f85dac432f9315 122 Pfam PF01638 HxlR-like helix-turn-helix 22 110 6.0E-39 T 13-10-2018 IPR002577 Helix-turn-helix, HxlR type COP00_20800 6e16bdfe957b053e07f85dac432f9315 122 SUPERFAMILY SSF46785 10 116 4.09E-36 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_05275 4c323fae5a7282deb22b45434145f3c1 229 Gene3D G3DSA:3.60.160.10 12 226 6.3E-31 T 13-10-2018 IPR036983 Mitochondrial biogenesis AIM24 superfamily COP00_05275 4c323fae5a7282deb22b45434145f3c1 229 SUPERFAMILY SSF51219 27 223 2.88E-54 T 13-10-2018 IPR016031 Tryptophan RNA-binding attenuator protein-like domain superfamily COP00_05275 4c323fae5a7282deb22b45434145f3c1 229 Pfam PF01987 Mitochondrial biogenesis AIM24 27 220 1.9E-35 T 13-10-2018 IPR002838 Mitochondrial biogenesis protein AIM24 COP00_04905 9c086eaa437c2204a4cf0962f6059a6c 423 Pfam PF02817 e3 binding domain 128 162 1.8E-12 T 13-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 COP00_04905 9c086eaa437c2204a4cf0962f6059a6c 423 Gene3D G3DSA:2.40.50.100 1 108 2.3E-25 T 13-10-2018 COP00_04905 9c086eaa437c2204a4cf0962f6059a6c 423 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 26 55 - T 13-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 COP00_04905 9c086eaa437c2204a4cf0962f6059a6c 423 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 3 422 4.1E-177 T 13-10-2018 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|Reactome: R-HSA-389661|Reactome: R-HSA-71064|Reactome: R-HSA-71403 COP00_04905 9c086eaa437c2204a4cf0962f6059a6c 423 SUPERFAMILY SSF51230 2 92 6.67E-26 T 13-10-2018 IPR011053 Single hybrid motif COP00_04905 9c086eaa437c2204a4cf0962f6059a6c 423 Pfam PF00364 Biotin-requiring enzyme 3 75 5.5E-23 T 13-10-2018 IPR000089 Biotin/lipoyl attachment COP00_04905 9c086eaa437c2204a4cf0962f6059a6c 423 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 192 421 7.0E-79 T 13-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 COP00_04905 9c086eaa437c2204a4cf0962f6059a6c 423 Gene3D G3DSA:4.10.320.10 128 166 1.5E-14 T 13-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 COP00_04905 9c086eaa437c2204a4cf0962f6059a6c 423 Gene3D G3DSA:3.30.559.10 191 422 4.7E-89 T 13-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 COP00_04905 9c086eaa437c2204a4cf0962f6059a6c 423 SUPERFAMILY SSF47005 124 166 3.14E-9 T 13-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 COP00_04905 9c086eaa437c2204a4cf0962f6059a6c 423 SUPERFAMILY SSF52777 192 421 3.25E-86 T 13-10-2018 COP00_12245 dfc4cfb5795d0f3afab1ed71bab8eb4a 511 Gene3D G3DSA:2.115.10.20 43 357 4.3E-99 T 13-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily COP00_12245 dfc4cfb5795d0f3afab1ed71bab8eb4a 511 Gene3D G3DSA:2.60.120.560 360 511 2.1E-33 T 13-10-2018 COP00_12245 dfc4cfb5795d0f3afab1ed71bab8eb4a 511 Pfam PF00251 Glycosyl hydrolases family 32 N-terminal domain 46 347 1.1E-81 T 13-10-2018 IPR013148 Glycosyl hydrolase family 32, N-terminal COP00_12245 dfc4cfb5795d0f3afab1ed71bab8eb4a 511 SUPERFAMILY SSF75005 41 355 1.47E-82 T 13-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily COP00_12245 dfc4cfb5795d0f3afab1ed71bab8eb4a 511 SMART SM00640 46 474 9.9E-108 T 13-10-2018 IPR001362 Glycoside hydrolase, family 32 GO:0004553|GO:0005975 COP00_12245 dfc4cfb5795d0f3afab1ed71bab8eb4a 511 Pfam PF08244 Glycosyl hydrolases family 32 C terminal 361 508 6.2E-22 T 13-10-2018 IPR013189 Glycosyl hydrolase family 32, C-terminal COP00_12245 dfc4cfb5795d0f3afab1ed71bab8eb4a 511 SUPERFAMILY SSF49899 355 509 1.5E-24 T 13-10-2018 IPR013320 Concanavalin A-like lectin/glucanase domain superfamily COP00_02060 8420ea2ffdaa8d51e66c0275adf3ae31 286 Gene3D G3DSA:3.40.50.720 9 265 7.6E-61 T 13-10-2018 COP00_02060 8420ea2ffdaa8d51e66c0275adf3ae31 286 SUPERFAMILY SSF51735 6 282 2.97E-41 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily COP00_02060 8420ea2ffdaa8d51e66c0275adf3ae31 286 Gene3D G3DSA:3.90.25.10 133 267 7.6E-61 T 13-10-2018 COP00_02060 8420ea2ffdaa8d51e66c0275adf3ae31 286 Pfam PF13460 NAD(P)H-binding 12 117 5.8E-9 T 13-10-2018 IPR016040 NAD(P)-binding domain COP00_21475 c95fc7c530cccbd2ee081936c5eaa456 236 Pfam PF04519 Polymer-forming cytoskeletal 69 142 3.6E-6 T 13-10-2018 IPR007607 Bactofilin A/B COP00_21475 c95fc7c530cccbd2ee081936c5eaa456 236 Pfam PF04519 Polymer-forming cytoskeletal 18 83 3.8E-9 T 13-10-2018 IPR007607 Bactofilin A/B COP00_18710 138463306d1c68011c0ca48b9e62a671 132 Pfam PF06983 3-demethylubiquinone-9 3-methyltransferase 8 123 1.7E-8 T 13-10-2018 IPR028973 PhnB-like COP00_18710 138463306d1c68011c0ca48b9e62a671 132 SUPERFAMILY SSF54593 4 129 2.89E-31 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase COP00_18710 138463306d1c68011c0ca48b9e62a671 132 Gene3D G3DSA:3.10.180.10 1 131 3.3E-34 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase COP00_05520 94e278dc3cfedb8d18a13fce5f520152 288 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 3 279 1.1E-112 T 13-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 COP00_05520 94e278dc3cfedb8d18a13fce5f520152 288 Hamap MF_00158 Pantothenate synthetase [panC]. 2 278 37.342 T 13-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 COP00_05520 94e278dc3cfedb8d18a13fce5f520152 288 Gene3D G3DSA:3.30.1300.10 178 276 1.6E-30 T 13-10-2018 COP00_05520 94e278dc3cfedb8d18a13fce5f520152 288 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 26 74 5.7E-8 T 13-10-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 COP00_05520 94e278dc3cfedb8d18a13fce5f520152 288 SUPERFAMILY SSF52374 1 280 2.28E-99 T 13-10-2018 COP00_05520 94e278dc3cfedb8d18a13fce5f520152 288 Gene3D G3DSA:3.40.50.620 3 177 5.4E-70 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold COP00_05520 94e278dc3cfedb8d18a13fce5f520152 288 Pfam PF02569 Pantoate-beta-alanine ligase 4 277 2.8E-96 T 13-10-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 COP00_20400 d4c4f25079a9b65d9d8eb443eda58843 441 Pfam PF01494 FAD binding domain 5 342 6.9E-6 T 13-10-2018 IPR002938 FAD-binding domain GO:0071949 COP00_20400 d4c4f25079a9b65d9d8eb443eda58843 441 SUPERFAMILY SSF51905 4 369 3.18E-24 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily COP00_20400 d4c4f25079a9b65d9d8eb443eda58843 441 Gene3D G3DSA:3.50.50.60 2 388 3.2E-28 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily COP00_08800 e83116262abf4e13d78b0c0a38c43254 196 Gene3D G3DSA:3.40.50.360 1 195 1.9E-61 T 13-10-2018 IPR029039 Flavoprotein-like superfamily COP00_08800 e83116262abf4e13d78b0c0a38c43254 196 SUPERFAMILY SSF52218 1 193 3.35E-58 T 13-10-2018 IPR029039 Flavoprotein-like superfamily COP00_08800 e83116262abf4e13d78b0c0a38c43254 196 Pfam PF02525 Flavodoxin-like fold 1 185 3.4E-52 T 13-10-2018 IPR003680 Flavodoxin-like fold COP00_08240 ca9763b70d29a8c611afeb05ffba578b 147 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 2 144 1.5E-57 T 13-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 COP00_08240 ca9763b70d29a8c611afeb05ffba578b 147 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 145 35.796 T 13-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 COP00_08240 ca9763b70d29a8c611afeb05ffba578b 147 SUPERFAMILY SSF69500 1 145 1.14E-58 T 13-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily COP00_08240 ca9763b70d29a8c611afeb05ffba578b 147 Gene3D G3DSA:3.50.80.10 1 147 7.4E-60 T 13-10-2018 IPR023509 D-aminoacyl-tRNA deacylase-like superfamily COP00_08240 ca9763b70d29a8c611afeb05ffba578b 147 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 1 146 9.5E-67 T 13-10-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 COP00_13985 57c7edcd1ca67317078d0933a2d4eb8c 176 Pfam PF10740 Domain of unknown function (DUF2529) 2 172 7.0E-64 T 13-10-2018 IPR019676 Domain of unknown function (DUF2529) COP00_13985 57c7edcd1ca67317078d0933a2d4eb8c 176 Gene3D G3DSA:3.40.50.10490 1 176 6.0E-56 T 13-10-2018 COP00_05630 358376c81651ecdbc5fe8c1da12c33bd 406 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 4 392 51.322 T 13-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 COP00_05630 358376c81651ecdbc5fe8c1da12c33bd 406 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 9 391 8.7E-186 T 13-10-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 COP00_05630 358376c81651ecdbc5fe8c1da12c33bd 406 PIRSF PIRSF001413 2 398 3.6E-162 T 13-10-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 COP00_05630 358376c81651ecdbc5fe8c1da12c33bd 406 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 54 379 2.6E-48 T 13-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme COP00_05630 358376c81651ecdbc5fe8c1da12c33bd 406 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 83 97 - T 13-10-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 COP00_05630 358376c81651ecdbc5fe8c1da12c33bd 406 Gene3D G3DSA:3.40.50.1100 56 385 3.3E-181 T 13-10-2018 COP00_05630 358376c81651ecdbc5fe8c1da12c33bd 406 SUPERFAMILY SSF53686 5 390 1.13E-140 T 13-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme COP00_05630 358376c81651ecdbc5fe8c1da12c33bd 406 Gene3D G3DSA:3.40.50.1100 12 208 3.3E-181 T 13-10-2018 COP00_10050 e59575f061aaaf14d1a97af2435908fe 236 Gene3D G3DSA:3.60.15.10 5 236 1.1E-65 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like COP00_10050 e59575f061aaaf14d1a97af2435908fe 236 Pfam PF13483 Beta-lactamase superfamily domain 8 200 1.1E-24 T 13-10-2018 COP00_10050 e59575f061aaaf14d1a97af2435908fe 236 Hamap MF_00457 UPF0173 metal-dependent hydrolase . 6 235 32.745 T 13-10-2018 IPR022877 Protein of unknown funcion UPF0173 COP00_10050 e59575f061aaaf14d1a97af2435908fe 236 SMART SM00849 11 200 2.1E-13 T 13-10-2018 IPR001279 Metallo-beta-lactamase COP00_10050 e59575f061aaaf14d1a97af2435908fe 236 SUPERFAMILY SSF56281 4 204 2.62E-37 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like COP00_07120 76c70bfc2b14f2caed6f1dc41a5cd74e 230 Pfam PF14181 YqfQ-like protein 60 230 5.4E-39 T 13-10-2018 IPR025571 YqfQ-like protein COP00_03110 ca8177276ba591acf57dfc1358f36ab6 135 SUPERFAMILY SSF52540 2 110 3.55E-12 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_03110 ca8177276ba591acf57dfc1358f36ab6 135 Gene3D G3DSA:1.10.8.60 41 131 1.4E-20 T 13-10-2018 COP00_03110 ca8177276ba591acf57dfc1358f36ab6 135 PRINTS PR00819 CbxX/CfqX superfamily signature 28 47 1.1E-19 T 13-10-2018 IPR000641 CbxX/CfqX GO:0005524 COP00_03110 ca8177276ba591acf57dfc1358f36ab6 135 PRINTS PR00819 CbxX/CfqX superfamily signature 11 28 1.1E-19 T 13-10-2018 IPR000641 CbxX/CfqX GO:0005524 COP00_03110 ca8177276ba591acf57dfc1358f36ab6 135 PRINTS PR00819 CbxX/CfqX superfamily signature 88 100 1.1E-19 T 13-10-2018 IPR000641 CbxX/CfqX GO:0005524 COP00_03110 ca8177276ba591acf57dfc1358f36ab6 135 Gene3D G3DSA:3.40.50.300 1 40 5.2E-7 T 13-10-2018 COP00_22450 2aa6fc8915f0941829b439f8675add58 150 SUPERFAMILY SSF47240 13 142 3.83E-28 T 13-10-2018 IPR009078 Ferritin-like superfamily COP00_22450 2aa6fc8915f0941829b439f8675add58 150 Pfam PF13668 Ferritin-like domain 23 139 2.3E-6 T 13-10-2018 COP00_22450 2aa6fc8915f0941829b439f8675add58 150 Gene3D G3DSA:1.20.1260.10 17 142 3.3E-18 T 13-10-2018 IPR012347 Ferritin-like COP00_06640 99a0f0e52aa33427dc0889c8b1afdb47 398 TIGRFAM TIGR02829 spore_III_AE: stage III sporulation protein AE 3 391 6.7E-154 T 13-10-2018 IPR014194 Sporulation stage III, protein AE COP00_06640 99a0f0e52aa33427dc0889c8b1afdb47 398 Pfam PF09546 Stage III sporulation protein AE (spore_III_AE) 76 391 2.9E-106 T 13-10-2018 IPR014194 Sporulation stage III, protein AE COP00_12760 b292c18fd66cdda5eb7b0b59bb9f0809 197 SMART SM00947 26 182 5.2E-36 T 13-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 COP00_12760 b292c18fd66cdda5eb7b0b59bb9f0809 197 Pfam PF00484 Carbonic anhydrase 34 176 4.3E-18 T 13-10-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 COP00_12760 b292c18fd66cdda5eb7b0b59bb9f0809 197 SUPERFAMILY SSF53056 3 185 1.44E-42 T 13-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 COP00_12760 b292c18fd66cdda5eb7b0b59bb9f0809 197 Gene3D G3DSA:3.40.1050.10 1 182 1.8E-47 T 13-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 COP00_10720 585cedb7b1945084b503f0234d836ab3 197 SUPERFAMILY SSF53474 9 195 3.9E-24 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold COP00_10720 585cedb7b1945084b503f0234d836ab3 197 Gene3D G3DSA:3.40.50.1820 5 196 1.6E-29 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold COP00_10720 585cedb7b1945084b503f0234d836ab3 197 Pfam PF01738 Dienelactone hydrolase family 9 195 4.8E-25 T 13-10-2018 IPR002925 Dienelactone hydrolase GO:0016787 COP00_04035 4f5c30609711bc87a5d1fdccb4e3e9a5 31 TIGRFAM TIGR02115 potass_kdpF: K+-transporting ATPase, F subunit 8 31 2.6E-8 T 13-10-2018 IPR011726 K+ transporting P-type ATPase, F subunit GO:0005886|GO:0008556|GO:0043462 COP00_04035 4f5c30609711bc87a5d1fdccb4e3e9a5 31 Pfam PF09604 F subunit of K+-transporting ATPase (Potass_KdpF) 8 31 5.2E-10 T 13-10-2018 IPR011726 K+ transporting P-type ATPase, F subunit GO:0005886|GO:0008556|GO:0043462 COP00_07410 72aedbdc1279d5f297d2a85dbac364db 96 SMART SM01103 2 85 3.4E-42 T 13-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 COP00_07410 72aedbdc1279d5f297d2a85dbac364db 96 Pfam PF01985 CRS1 / YhbY (CRM) domain 2 85 5.6E-23 T 13-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 COP00_07410 72aedbdc1279d5f297d2a85dbac364db 96 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 8 96 2.0E-42 T 13-10-2018 IPR001890 RNA-binding, CRM domain GO:0003723 COP00_07410 72aedbdc1279d5f297d2a85dbac364db 96 TIGRFAM TIGR00253 RNA_bind_YhbY: putative RNA-binding protein, YhbY family 2 96 3.2E-42 T 13-10-2018 IPR017924 RNA-binding protein YhbY GO:0003723 COP00_07410 72aedbdc1279d5f297d2a85dbac364db 96 Gene3D G3DSA:3.30.110.60 1 96 2.3E-38 T 13-10-2018 IPR035920 YhbY-like superfamily COP00_07410 72aedbdc1279d5f297d2a85dbac364db 96 SUPERFAMILY SSF75471 1 95 2.09E-31 T 13-10-2018 IPR035920 YhbY-like superfamily COP00_17800 3d08eb98fbc1e1626d22cf2a9e34b45e 131 Pfam PF06271 RDD family 3 120 7.6E-16 T 13-10-2018 IPR010432 RDD COP00_01865 b51c252a810111d9b84dce843ab08a46 29 Pfam PF09680 Protein of unknown function (Tiny_TM_bacill) 4 27 1.1E-12 T 13-10-2018 IPR010070 Sporulation protein YjcZ-like COP00_01865 b51c252a810111d9b84dce843ab08a46 29 TIGRFAM TIGR01732 tiny_TM_bacill: conserved hypothetical protein 4 27 2.2E-15 T 13-10-2018 IPR010070 Sporulation protein YjcZ-like COP00_04940 f2642177d3f84a7f4ce90e781b043162 221 TIGRFAM TIGR04000 thiol_BshB2: bacillithiol biosynthesis deacetylase BshB2 3 219 2.9E-108 T 13-10-2018 IPR023841 Bacillithiol biosynthesis deacetylase BshB2 COP00_04940 f2642177d3f84a7f4ce90e781b043162 221 Gene3D G3DSA:3.40.50.10320 1 215 4.8E-48 T 13-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 COP00_04940 f2642177d3f84a7f4ce90e781b043162 221 Pfam PF02585 GlcNAc-PI de-N-acetylase 6 135 6.1E-27 T 13-10-2018 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related Reactome: R-HSA-162710 COP00_04940 f2642177d3f84a7f4ce90e781b043162 221 SUPERFAMILY SSF102588 1 188 3.01E-50 T 13-10-2018 IPR024078 Putative deacetylase LmbE-like domain superfamily Reactome: R-HSA-162710 COP00_17940 7e6483564b5242a6be84f6dceb5a29ec 142 Pfam PF07486 Cell Wall Hydrolase 24 128 9.7E-19 T 13-10-2018 IPR011105 Cell wall hydrolase, SleB GO:0016787 COP00_17940 7e6483564b5242a6be84f6dceb5a29ec 142 Gene3D G3DSA:1.10.10.2520 8 91 5.8E-13 T 13-10-2018 COP00_07800 1eca0f29b44ad267c7bdc06576d9d099 562 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 141 179 - T 13-10-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 COP00_07800 1eca0f29b44ad267c7bdc06576d9d099 562 SUPERFAMILY SSF53187 11 527 6.57E-28 T 13-10-2018 COP00_07800 1eca0f29b44ad267c7bdc06576d9d099 562 PIRSF PIRSF010386 3 554 1.3E-212 T 13-10-2018 IPR012166 Uncharacterised protein family RocB COP00_07800 1eca0f29b44ad267c7bdc06576d9d099 562 Gene3D G3DSA:3.40.630.10 2 215 3.0E-28 T 13-10-2018 COP00_07800 1eca0f29b44ad267c7bdc06576d9d099 562 Pfam PF01546 Peptidase family M20/M25/M40 134 194 3.5E-7 T 13-10-2018 IPR002933 Peptidase M20 GO:0016787 COP00_14525 6384a571ca35b92551e6eda22398396b 219 Gene3D G3DSA:3.30.460.10 20 169 6.1E-51 T 13-10-2018 COP00_14525 6384a571ca35b92551e6eda22398396b 219 Pfam PF04607 Region found in RelA / SpoT proteins 65 186 1.1E-37 T 13-10-2018 IPR007685 RelA/SpoT GO:0015969 COP00_14525 6384a571ca35b92551e6eda22398396b 219 SUPERFAMILY SSF81301 26 215 4.9E-56 T 13-10-2018 COP00_14525 6384a571ca35b92551e6eda22398396b 219 SMART SM00954 65 188 4.0E-47 T 13-10-2018 IPR007685 RelA/SpoT GO:0015969 COP00_14525 6384a571ca35b92551e6eda22398396b 219 Gene3D G3DSA:1.10.287.860 171 217 2.0E-17 T 13-10-2018 COP00_18700 0a62c06f2e5e5cb0c174f52686f2be5b 127 SMART SM00422 5 74 1.1E-17 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 COP00_18700 0a62c06f2e5e5cb0c174f52686f2be5b 127 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 41 61 3.3E-5 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 COP00_18700 0a62c06f2e5e5cb0c174f52686f2be5b 127 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 17 30 3.3E-5 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 COP00_18700 0a62c06f2e5e5cb0c174f52686f2be5b 127 Pfam PF13411 MerR HTH family regulatory protein 5 69 3.2E-15 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 COP00_18700 0a62c06f2e5e5cb0c174f52686f2be5b 127 SUPERFAMILY SSF46955 4 116 4.27E-31 T 13-10-2018 IPR009061 Putative DNA-binding domain superfamily COP00_18700 0a62c06f2e5e5cb0c174f52686f2be5b 127 Gene3D G3DSA:1.10.1660.10 2 126 6.9E-34 T 13-10-2018 COP00_10485 734d2a5b6c7ab5fed0f344214cbff8c2 130 Gene3D G3DSA:3.10.129.10 1 129 1.6E-52 T 13-10-2018 COP00_10485 734d2a5b6c7ab5fed0f344214cbff8c2 130 Pfam PF03061 Thioesterase superfamily 37 115 7.6E-18 T 13-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 COP00_10485 734d2a5b6c7ab5fed0f344214cbff8c2 130 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 7 123 2.2E-39 T 13-10-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 COP00_10485 734d2a5b6c7ab5fed0f344214cbff8c2 130 SUPERFAMILY SSF54637 6 126 4.45E-32 T 13-10-2018 IPR029069 HotDog domain superfamily COP00_01475 b82b4525731d3f42b2db278a9158cea3 162 SUPERFAMILY SSF50341 4 144 2.35E-35 T 13-10-2018 IPR036061 CheW-like domain superfamily GO:0006935|GO:0007165 COP00_01475 b82b4525731d3f42b2db278a9158cea3 162 Gene3D G3DSA:2.30.30.40 12 137 8.4E-37 T 13-10-2018 COP00_01475 b82b4525731d3f42b2db278a9158cea3 162 Gene3D G3DSA:2.40.50.180 29 138 8.4E-37 T 13-10-2018 COP00_01475 b82b4525731d3f42b2db278a9158cea3 162 SMART SM00260 6 143 2.8E-36 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 COP00_01475 b82b4525731d3f42b2db278a9158cea3 162 Pfam PF01584 CheW-like domain 11 145 1.3E-32 T 13-10-2018 IPR002545 CheW-like domain GO:0006935|GO:0007165 COP00_10070 2b2a35da1242e3bf601c0f11195bf03c 367 SUPERFAMILY SSF46785 2 72 2.7E-19 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_10070 2b2a35da1242e3bf601c0f11195bf03c 367 Pfam PF13377 Periplasmic binding protein-like domain 197 361 1.1E-31 T 13-10-2018 COP00_10070 2b2a35da1242e3bf601c0f11195bf03c 367 Gene3D G3DSA:1.10.10.10 3 69 1.7E-25 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_10070 2b2a35da1242e3bf601c0f11195bf03c 367 Gene3D G3DSA:3.40.50.2300 86 353 5.0E-86 T 13-10-2018 COP00_10070 2b2a35da1242e3bf601c0f11195bf03c 367 SMART SM00345 10 69 1.4E-17 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 COP00_10070 2b2a35da1242e3bf601c0f11195bf03c 367 Pfam PF00392 Bacterial regulatory proteins, gntR family 7 68 1.2E-17 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 COP00_10070 2b2a35da1242e3bf601c0f11195bf03c 367 Gene3D G3DSA:3.40.50.2300 189 358 5.0E-86 T 13-10-2018 COP00_10070 2b2a35da1242e3bf601c0f11195bf03c 367 SUPERFAMILY SSF53822 84 362 2.36E-67 T 13-10-2018 IPR028082 Periplasmic binding protein-like I COP00_10070 2b2a35da1242e3bf601c0f11195bf03c 367 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 29 43 3.9E-6 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 COP00_10070 2b2a35da1242e3bf601c0f11195bf03c 367 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 43 59 3.9E-6 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 COP00_07875 67c7cccef5cfab627dc694c1b8b51502 935 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 210 225 - T 13-10-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 COP00_07875 67c7cccef5cfab627dc694c1b8b51502 935 SUPERFAMILY SSF52540 123 370 7.48E-40 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_07875 67c7cccef5cfab627dc694c1b8b51502 935 Pfam PF03610 PTS system fructose IIA component 576 689 2.5E-13 T 13-10-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 COP00_07875 67c7cccef5cfab627dc694c1b8b51502 935 SUPERFAMILY SSF46785 23 68 1.32E-6 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_07875 67c7cccef5cfab627dc694c1b8b51502 935 Gene3D G3DSA:3.40.50.510 571 704 6.4E-42 T 13-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 COP00_07875 67c7cccef5cfab627dc694c1b8b51502 935 SUPERFAMILY SSF63520 462 566 5.89E-18 T 13-10-2018 IPR036634 PRD domain superfamily GO:0006355 COP00_07875 67c7cccef5cfab627dc694c1b8b51502 935 Pfam PF00158 Sigma-54 interaction domain 114 280 4.5E-47 T 13-10-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 COP00_07875 67c7cccef5cfab627dc694c1b8b51502 935 SMART SM00382 137 291 9.8E-13 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_07875 67c7cccef5cfab627dc694c1b8b51502 935 Pfam PF00874 PRD domain 843 927 2.6E-14 T 13-10-2018 IPR011608 PRD domain GO:0006355 COP00_07875 67c7cccef5cfab627dc694c1b8b51502 935 Pfam PF00874 PRD domain 480 565 1.0E-14 T 13-10-2018 IPR011608 PRD domain GO:0006355 COP00_07875 67c7cccef5cfab627dc694c1b8b51502 935 ProSitePatterns PS00654 PRD domain signature. 501 513 - T 13-10-2018 IPR001550 Transcription antiterminator, conserved site GO:0003723|GO:0045893 COP00_07875 67c7cccef5cfab627dc694c1b8b51502 935 SUPERFAMILY SSF63520 824 929 3.53E-16 T 13-10-2018 IPR036634 PRD domain superfamily GO:0006355 COP00_07875 67c7cccef5cfab627dc694c1b8b51502 935 Gene3D G3DSA:3.40.50.300 104 290 1.1E-41 T 13-10-2018 COP00_07875 67c7cccef5cfab627dc694c1b8b51502 935 Gene3D G3DSA:1.10.1790.10 832 930 1.5E-9 T 13-10-2018 COP00_07875 67c7cccef5cfab627dc694c1b8b51502 935 Gene3D G3DSA:1.10.1790.10 469 568 5.3E-14 T 13-10-2018 COP00_07875 67c7cccef5cfab627dc694c1b8b51502 935 SUPERFAMILY SSF53062 574 692 2.22E-21 T 13-10-2018 IPR036662 Phosphotransferase system, mannose-type IIA component superfamily GO:0009401|GO:0016021 COP00_16865 2272594ab79ad0b7109c89d7933423ab 512 Pfam PF09346 SMI1 / KNR4 family (SUKH-1) 24 160 1.6E-28 T 13-10-2018 IPR018958 Knr4/Smi1-like domain COP00_16865 2272594ab79ad0b7109c89d7933423ab 512 SMART SM00860 24 162 2.8E-12 T 13-10-2018 IPR018958 Knr4/Smi1-like domain COP00_16865 2272594ab79ad0b7109c89d7933423ab 512 SUPERFAMILY SSF160631 13 175 1.83E-18 T 13-10-2018 COP00_16865 2272594ab79ad0b7109c89d7933423ab 512 Gene3D G3DSA:3.40.1580.10 2 168 2.6E-15 T 13-10-2018 IPR037883 Knr4/Smi1-like domain superfamily COP00_16865 2272594ab79ad0b7109c89d7933423ab 512 Gene3D G3DSA:3.80.10.10 223 493 5.4E-38 T 13-10-2018 IPR032675 Leucine-rich repeat domain superfamily COP00_16865 2272594ab79ad0b7109c89d7933423ab 512 SUPERFAMILY SSF52058 239 471 2.98E-32 T 13-10-2018 COP00_16685 97401219dadabb96c9ba2c58dde4900d 207 SUPERFAMILY SSF52166 1 206 1.96E-85 T 13-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 COP00_16685 97401219dadabb96c9ba2c58dde4900d 207 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 9 207 38.519 T 13-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_16685 97401219dadabb96c9ba2c58dde4900d 207 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 17 204 1.0E-84 T 13-10-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_16685 97401219dadabb96c9ba2c58dde4900d 207 Pfam PF00573 Ribosomal protein L4/L1 family 17 204 7.9E-74 T 13-10-2018 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 COP00_16685 97401219dadabb96c9ba2c58dde4900d 207 Gene3D G3DSA:3.40.1370.10 3 207 3.3E-84 T 13-10-2018 IPR023574 Ribosomal protein L4 domain superfamily GO:0003735|GO:0005840|GO:0006412 COP00_18190 798aad7784f182af130b5283a55711aa 145 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 14 133 8.3E-17 T 13-10-2018 IPR013538 Activator of Hsp90 ATPase homologue 1-like COP00_18190 798aad7784f182af130b5283a55711aa 145 SUPERFAMILY SSF55961 3 133 6.68E-24 T 13-10-2018 COP00_18190 798aad7784f182af130b5283a55711aa 145 Gene3D G3DSA:3.30.530.20 3 144 8.3E-34 T 13-10-2018 IPR023393 START-like domain superfamily COP00_17410 9017cb99cfe1e36e4742b854a6bd77ac 112 Pfam PF01638 HxlR-like helix-turn-helix 19 107 6.4E-37 T 13-10-2018 IPR002577 Helix-turn-helix, HxlR type COP00_17410 9017cb99cfe1e36e4742b854a6bd77ac 112 Gene3D G3DSA:1.10.10.10 1 112 3.2E-40 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_17410 9017cb99cfe1e36e4742b854a6bd77ac 112 SUPERFAMILY SSF46785 6 103 3.67E-34 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_11680 ec024850de6ef42cbde9c300b000a222 142 Pfam PF01391 Collagen triple helix repeat (20 copies) 43 85 3.9E-9 T 13-10-2018 IPR008160 Collagen triple helix repeat COP00_11680 ec024850de6ef42cbde9c300b000a222 142 Gene3D G3DSA:1.20.5.320 58 107 7.3E-6 T 13-10-2018 COP00_13745 fd2e2a78028e375ce65345a5d0b8edce 341 Pfam PF06463 Molybdenum Cofactor Synthesis C 195 320 5.3E-38 T 13-10-2018 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 COP00_13745 fd2e2a78028e375ce65345a5d0b8edce 341 Gene3D G3DSA:3.20.20.70 5 341 2.5E-105 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 COP00_13745 fd2e2a78028e375ce65345a5d0b8edce 341 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 23 34 - T 13-10-2018 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 COP00_13745 fd2e2a78028e375ce65345a5d0b8edce 341 Pfam PF13353 4Fe-4S single cluster domain 24 128 6.6E-7 T 13-10-2018 COP00_13745 fd2e2a78028e375ce65345a5d0b8edce 341 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 9 341 1.3E-119 T 13-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 COP00_13745 fd2e2a78028e375ce65345a5d0b8edce 341 SUPERFAMILY SSF102114 10 292 7.19E-79 T 13-10-2018 COP00_13745 fd2e2a78028e375ce65345a5d0b8edce 341 Pfam PF04055 Radical SAM superfamily 21 186 3.7E-33 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 COP00_13745 fd2e2a78028e375ce65345a5d0b8edce 341 Hamap MF_01225_B GTP 3',8-cyclase [moaA]. 8 341 42.485 T 13-10-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 KEGG: 00790+4.1.99.22|MetaCyc: PWY-6823|Reactome: R-HSA-947581 COP00_13745 fd2e2a78028e375ce65345a5d0b8edce 341 SMART SM00729 17 226 3.7E-20 T 13-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 COP00_10850 ab133c2bbaef7db1cff727c7a9ef5fde 195 Gene3D G3DSA:1.10.357.10 5 195 9.6E-55 T 13-10-2018 COP00_10850 ab133c2bbaef7db1cff727c7a9ef5fde 195 SUPERFAMILY SSF48498 79 193 1.78E-23 T 13-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily COP00_10850 ab133c2bbaef7db1cff727c7a9ef5fde 195 SUPERFAMILY SSF46689 5 74 4.1E-13 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 COP00_10850 ab133c2bbaef7db1cff727c7a9ef5fde 195 ProSitePatterns PS01081 TetR-type HTH domain signature. 26 56 - T 13-10-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site COP00_10850 ab133c2bbaef7db1cff727c7a9ef5fde 195 Pfam PF13977 BetI-type transcriptional repressor, C-terminal 81 193 1.5E-25 T 13-10-2018 IPR039538 BetI-type transcriptional repressor, C-terminal COP00_10850 ab133c2bbaef7db1cff727c7a9ef5fde 195 Pfam PF00440 Bacterial regulatory proteins, tetR family 19 58 2.2E-8 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 COP00_03215 58ff7a92f8101be2fba096ea94bc6d83 126 TIGRFAM TIGR01637 phage_arpU: phage transcriptional regulator, ArpU family 9 125 2.0E-28 T 13-10-2018 IPR006524 Transcription activator, ArpU family COP00_18690 cbcfd39c495a1d222a2ec1ae1310e0d5 106 Gene3D G3DSA:2.102.10.10 4 106 2.5E-26 T 13-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 COP00_18690 cbcfd39c495a1d222a2ec1ae1310e0d5 106 SUPERFAMILY SSF50022 7 105 9.95E-31 T 13-10-2018 IPR036922 Rieske [2Fe-2S] iron-sulphur domain superfamily GO:0016491|GO:0051537|GO:0055114 COP00_18690 cbcfd39c495a1d222a2ec1ae1310e0d5 106 TIGRFAM TIGR02378 nirD_assim_sml: nitrite reductase [NAD(P)H], small subunit 7 104 7.9E-28 T 13-10-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 COP00_18690 cbcfd39c495a1d222a2ec1ae1310e0d5 106 Pfam PF13806 Rieske-like [2Fe-2S] domain 11 102 1.1E-14 T 13-10-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 COP00_24160 1e881557c9201956c29153688996bdb6 98 Pfam PF06803 Protein of unknown function (DUF1232) 41 77 3.9E-13 T 13-10-2018 IPR010652 Domain of unknown function DUF1232 MetaCyc: PWY-7511 COP00_03850 bf89cf135423ddff8fdb0c2cedacd3b1 177 SUPERFAMILY SSF55729 3 157 2.86E-42 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase COP00_03850 bf89cf135423ddff8fdb0c2cedacd3b1 177 Gene3D G3DSA:3.40.630.30 2 172 5.8E-45 T 13-10-2018 COP00_03850 bf89cf135423ddff8fdb0c2cedacd3b1 177 Pfam PF13302 Acetyltransferase (GNAT) domain 10 149 1.7E-33 T 13-10-2018 IPR000182 GNAT domain COP00_17150 59de637e64a5a5e2263c68d5141eeec4 1024 Pfam PF13575 Domain of unknown function (DUF4135) 172 548 1.2E-120 T 13-10-2018 IPR025410 Lantibiotic biosynthesis protein, dehydration domain COP00_17150 59de637e64a5a5e2263c68d5141eeec4 1024 Pfam PF05147 Lanthionine synthetase C-like protein 670 1015 2.6E-70 T 13-10-2018 IPR007822 Lanthionine synthetase C-like COP00_17150 59de637e64a5a5e2263c68d5141eeec4 1024 Gene3D G3DSA:1.50.10.10 587 1012 2.3E-43 T 13-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 COP00_17150 59de637e64a5a5e2263c68d5141eeec4 1024 SUPERFAMILY SSF158745 647 1018 4.18E-82 T 13-10-2018 COP00_17150 59de637e64a5a5e2263c68d5141eeec4 1024 PRINTS PR01950 LanC-like protein superfamily signature 887 907 9.9E-16 T 13-10-2018 IPR007822 Lanthionine synthetase C-like COP00_17150 59de637e64a5a5e2263c68d5141eeec4 1024 PRINTS PR01950 LanC-like protein superfamily signature 933 946 9.9E-16 T 13-10-2018 IPR007822 Lanthionine synthetase C-like COP00_17150 59de637e64a5a5e2263c68d5141eeec4 1024 PRINTS PR01950 LanC-like protein superfamily signature 827 843 9.9E-16 T 13-10-2018 IPR007822 Lanthionine synthetase C-like COP00_17150 59de637e64a5a5e2263c68d5141eeec4 1024 PRINTS PR01950 LanC-like protein superfamily signature 988 1005 9.9E-16 T 13-10-2018 IPR007822 Lanthionine synthetase C-like COP00_17150 59de637e64a5a5e2263c68d5141eeec4 1024 PRINTS PR01950 LanC-like protein superfamily signature 673 691 9.9E-16 T 13-10-2018 IPR007822 Lanthionine synthetase C-like COP00_17150 59de637e64a5a5e2263c68d5141eeec4 1024 PRINTS PR01950 LanC-like protein superfamily signature 769 784 9.9E-16 T 13-10-2018 IPR007822 Lanthionine synthetase C-like COP00_17150 59de637e64a5a5e2263c68d5141eeec4 1024 SMART SM01260 670 1016 2.8E-92 T 13-10-2018 IPR007822 Lanthionine synthetase C-like COP00_17150 59de637e64a5a5e2263c68d5141eeec4 1024 TIGRFAM TIGR03897 lanti_2_LanM: type 2 lantibiotic biosynthesis protein LanM 78 1008 5.1E-303 T 13-10-2018 IPR017146 Type 2 lantibiotic biosynthesis protein LanM COP00_17150 59de637e64a5a5e2263c68d5141eeec4 1024 PIRSF PIRSF037228 16 1021 2.3E-258 T 13-10-2018 IPR017146 Type 2 lantibiotic biosynthesis protein LanM COP00_19085 282f40711405f00e11f22b0651e8d45b 160 Hamap MF_00638 Serine-protein kinase RsbW [rsbW]. 2 156 39.038 T 13-10-2018 IPR010193 Serine-protein kinase RsbW GO:0004674|GO:0005524|GO:0006468|GO:0016989|GO:0045892 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 COP00_19085 282f40711405f00e11f22b0651e8d45b 160 Gene3D G3DSA:3.30.565.10 5 155 3.8E-27 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily COP00_19085 282f40711405f00e11f22b0651e8d45b 160 Pfam PF13581 Histidine kinase-like ATPase domain 13 141 1.3E-29 T 13-10-2018 IPR003594 Histidine kinase/HSP90-like ATPase COP00_19085 282f40711405f00e11f22b0651e8d45b 160 SUPERFAMILY SSF55874 31 130 3.41E-14 T 13-10-2018 IPR036890 Histidine kinase/HSP90-like ATPase superfamily COP00_19085 282f40711405f00e11f22b0651e8d45b 160 TIGRFAM TIGR01924 rsbW_low_gc: anti-sigma B factor 1 159 1.3E-77 T 13-10-2018 IPR010193 Serine-protein kinase RsbW GO:0004674|GO:0005524|GO:0006468|GO:0016989|GO:0045892 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1|KEGG: 04714+2.7.11.1|KEGG: 04926+2.7.11.1|KEGG: 05163+2.7.11.1|KEGG: 05165+2.7.11.1|KEGG: 05170+2.7.11.1 COP00_18075 e3778615691280a970c491ec8214291f 495 SUPERFAMILY SSF103473 1 489 1.13E-71 T 13-10-2018 IPR036259 MFS transporter superfamily COP00_18075 e3778615691280a970c491ec8214291f 495 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 10 478 1.8E-80 T 13-10-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0016021|GO:0022857|GO:0055085 COP00_18075 e3778615691280a970c491ec8214291f 495 Gene3D G3DSA:1.20.1720.10 10 220 2.6E-54 T 13-10-2018 COP00_18075 e3778615691280a970c491ec8214291f 495 Gene3D G3DSA:1.20.1250.20 263 493 6.4E-24 T 13-10-2018 COP00_18075 e3778615691280a970c491ec8214291f 495 PRINTS PR01036 Tetracycline resistance protein TetB signature 263 288 3.2E-9 T 13-10-2018 COP00_18075 e3778615691280a970c491ec8214291f 495 PRINTS PR01036 Tetracycline resistance protein TetB signature 72 94 3.2E-9 T 13-10-2018 COP00_18075 e3778615691280a970c491ec8214291f 495 PRINTS PR01036 Tetracycline resistance protein TetB signature 13 37 3.2E-9 T 13-10-2018 COP00_18075 e3778615691280a970c491ec8214291f 495 PRINTS PR01036 Tetracycline resistance protein TetB signature 354 374 3.2E-9 T 13-10-2018 COP00_18075 e3778615691280a970c491ec8214291f 495 PRINTS PR01036 Tetracycline resistance protein TetB signature 229 247 3.2E-9 T 13-10-2018 COP00_18075 e3778615691280a970c491ec8214291f 495 PRINTS PR01036 Tetracycline resistance protein TetB signature 396 415 3.2E-9 T 13-10-2018 COP00_18075 e3778615691280a970c491ec8214291f 495 Pfam PF07690 Major Facilitator Superfamily 14 405 1.0E-51 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 COP00_15860 c008fb49971fd73ca24656771f1c1c6b 68 Pfam PF06107 Bacterial protein of unknown function (DUF951) 7 59 3.0E-30 T 13-10-2018 IPR009296 Protein of unknown function DUF951 COP00_15860 c008fb49971fd73ca24656771f1c1c6b 68 PIRSF PIRSF037263 1 66 1.5E-35 T 13-10-2018 IPR009296 Protein of unknown function DUF951 COP00_20505 66b8b9d78112847a0b7584cc313de19c 474 Pfam PF00939 Sodium:sulfate symporter transmembrane region 16 463 1.3E-77 T 13-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 COP00_20505 66b8b9d78112847a0b7584cc313de19c 474 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 33 465 1.4E-86 T 13-10-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 COP00_23435 19b31ed9f9f9e0813f359cedcc596711 438 Gene3D G3DSA:3.30.2320.10 270 411 1.3E-25 T 13-10-2018 COP00_23435 19b31ed9f9f9e0813f359cedcc596711 438 SUPERFAMILY SSF56563 132 415 4.32E-61 T 13-10-2018 COP00_23435 19b31ed9f9f9e0813f359cedcc596711 438 Pfam PF05065 Phage capsid family 140 415 7.8E-63 T 13-10-2018 IPR024455 Phage capsid COP00_23435 19b31ed9f9f9e0813f359cedcc596711 438 TIGRFAM TIGR01554 major_cap_HK97: phage major capsid protein, HK97 family 10 415 1.8E-80 T 13-10-2018 IPR024455 Phage capsid COP00_23435 19b31ed9f9f9e0813f359cedcc596711 438 Gene3D G3DSA:3.30.2400.10 174 406 1.3E-25 T 13-10-2018 COP00_13575 b60d9c3e290ef5c6390b050281a1255a 142 PRINTS PR00598 Bacterial regulatory protein MarR family signature 49 65 7.3E-8 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 COP00_13575 b60d9c3e290ef5c6390b050281a1255a 142 PRINTS PR00598 Bacterial regulatory protein MarR family signature 66 81 7.3E-8 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 COP00_13575 b60d9c3e290ef5c6390b050281a1255a 142 PRINTS PR00598 Bacterial regulatory protein MarR family signature 114 134 7.3E-8 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 COP00_13575 b60d9c3e290ef5c6390b050281a1255a 142 Gene3D G3DSA:1.10.10.10 2 141 6.6E-35 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_13575 b60d9c3e290ef5c6390b050281a1255a 142 SMART SM00347 25 124 2.5E-33 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 COP00_13575 b60d9c3e290ef5c6390b050281a1255a 142 Pfam PF01047 MarR family 35 88 6.5E-19 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 COP00_13575 b60d9c3e290ef5c6390b050281a1255a 142 SUPERFAMILY SSF46785 5 137 1.09E-31 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_04820 6dbcc3ff9abcd1978fefe2b28708ba9e 871 Hamap MF_01871 UPF0753 protein . 24 867 23.809 T 13-10-2018 IPR018752 Uncharacterised protein family UPF0753 COP00_04820 6dbcc3ff9abcd1978fefe2b28708ba9e 871 Pfam PF10070 Uncharacterized protein conserved in bacteria (DUF2309) 29 853 1.1E-262 T 13-10-2018 IPR018752 Uncharacterised protein family UPF0753 COP00_07135 8ad82b7fbbd86a3fb2f82932479070b5 240 PIRSF PIRSF018637 6 240 1.5E-87 T 13-10-2018 IPR006901 tRNA methyltransferase TrmK GO:0016429 COP00_07135 8ad82b7fbbd86a3fb2f82932479070b5 240 Gene3D G3DSA:3.40.50.150 2 166 7.7E-55 T 13-10-2018 COP00_07135 8ad82b7fbbd86a3fb2f82932479070b5 240 Pfam PF04816 tRNA (adenine(22)-N(1))-methyltransferase 25 235 5.6E-74 T 13-10-2018 IPR006901 tRNA methyltransferase TrmK GO:0016429 COP00_07135 8ad82b7fbbd86a3fb2f82932479070b5 240 SUPERFAMILY SSF53335 9 145 2.36E-5 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase COP00_17120 9429b0c1cde2bab8e5abfe4a063f7591 579 Gene3D G3DSA:3.40.50.300 330 579 3.8E-86 T 13-10-2018 COP00_17120 9429b0c1cde2bab8e5abfe4a063f7591 579 SUPERFAMILY SSF52540 332 577 3.11E-85 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_17120 9429b0c1cde2bab8e5abfe4a063f7591 579 Pfam PF00005 ABC transporter 355 507 1.3E-31 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 COP00_17120 9429b0c1cde2bab8e5abfe4a063f7591 579 SMART SM00382 364 553 3.4E-15 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_17120 9429b0c1cde2bab8e5abfe4a063f7591 579 Gene3D G3DSA:1.20.1560.10 1 326 3.5E-77 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 COP00_17120 9429b0c1cde2bab8e5abfe4a063f7591 579 Pfam PF00664 ABC transporter transmembrane region 27 294 9.1E-45 T 13-10-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0016021|GO:0042626|GO:0055085 COP00_17120 9429b0c1cde2bab8e5abfe4a063f7591 579 SUPERFAMILY SSF90123 23 325 1.7E-71 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 COP00_17120 9429b0c1cde2bab8e5abfe4a063f7591 579 ProSitePatterns PS00211 ABC transporters family signature. 479 493 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 COP00_17680 61d4821d4034bb6205b19022db735615 583 SUPERFAMILY SSF56300 167 516 1.54E-39 T 13-10-2018 COP00_17680 61d4821d4034bb6205b19022db735615 583 Pfam PF09423 PhoD-like phosphatase 175 512 4.2E-122 T 13-10-2018 IPR018946 Alkaline phosphatase D-related COP00_17680 61d4821d4034bb6205b19022db735615 583 Pfam PF16655 PhoD-like phosphatase, N-terminal domain 67 162 3.4E-33 T 13-10-2018 IPR032093 Phospholipase D, N-terminal COP00_17680 61d4821d4034bb6205b19022db735615 583 Gene3D G3DSA:3.60.21.70 166 583 2.6E-183 T 13-10-2018 IPR038607 PhoD-like superfamily COP00_17680 61d4821d4034bb6205b19022db735615 583 Gene3D G3DSA:2.60.40.380 57 165 8.0E-43 T 13-10-2018 IPR008963 Purple acid phosphatase-like, N-terminal GO:0003993|GO:0046872 COP00_18100 a6f94795b47acced1f8ee842a22e8f9e 272 SUPERFAMILY SSF52402 3 271 5.67E-83 T 13-10-2018 COP00_18100 a6f94795b47acced1f8ee842a22e8f9e 272 Gene3D G3DSA:3.40.50.620 1 272 3.6E-88 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold COP00_18100 a6f94795b47acced1f8ee842a22e8f9e 272 Hamap MF_00193 NH(3)-dependent NAD(+) synthetase [nadE]. 18 266 50.242 T 13-10-2018 IPR022926 NH(3)-dependent NAD(+) synthetase GO:0008795|GO:0009435 KEGG: 00760+6.3.1.5 COP00_18100 a6f94795b47acced1f8ee842a22e8f9e 272 Pfam PF02540 NAD synthase 23 263 1.5E-76 T 13-10-2018 IPR022310 NAD/GMP synthase COP00_18100 a6f94795b47acced1f8ee842a22e8f9e 272 TIGRFAM TIGR00552 nadE: NAD+ synthetase 17 272 1.4E-83 T 13-10-2018 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|Reactome: R-HSA-196807 COP00_15105 d149ea67909a863afe926a1681e43dc3 424 SUPERFAMILY SSF51621 3 422 1.03E-158 T 13-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 COP00_15105 d149ea67909a863afe926a1681e43dc3 424 Pfam PF00463 Isocitrate lyase family 7 245 8.4E-58 T 13-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 COP00_15105 d149ea67909a863afe926a1681e43dc3 424 Pfam PF00463 Isocitrate lyase family 246 422 5.5E-47 T 13-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 COP00_15105 d149ea67909a863afe926a1681e43dc3 424 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 7 245 5.9E-104 T 13-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 COP00_15105 d149ea67909a863afe926a1681e43dc3 424 PIRSF PIRSF001362 1 424 1.4E-238 T 13-10-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 COP00_15105 d149ea67909a863afe926a1681e43dc3 424 Gene3D G3DSA:3.20.20.60 2 405 2.5E-172 T 13-10-2018 COP00_15105 d149ea67909a863afe926a1681e43dc3 424 ProSitePatterns PS00161 Isocitrate lyase signature. 183 188 - T 13-10-2018 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824 COP00_16625 e1db54ec643df4f4da29caa436ff7af5 166 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 3 161 29.76 T 13-10-2018 IPR022973 Ribosomal protein L10 COP00_16625 e1db54ec643df4f4da29caa436ff7af5 166 SUPERFAMILY SSF160369 5 160 1.7E-56 T 13-10-2018 COP00_16625 e1db54ec643df4f4da29caa436ff7af5 166 Gene3D G3DSA:3.30.70.1730 2 165 7.6E-44 T 13-10-2018 COP00_16625 e1db54ec643df4f4da29caa436ff7af5 166 Pfam PF00466 Ribosomal protein L10 6 101 1.5E-31 T 13-10-2018 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 COP00_16625 e1db54ec643df4f4da29caa436ff7af5 166 ProSitePatterns PS01109 Ribosomal protein L10 signature. 8 42 - T 13-10-2018 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 COP00_22040 f7c719843d8619894a18406705956406 502 TIGRFAM TIGR03994 rSAM_HemZ: coproporphyrinogen dehydrogenase HemZ 86 488 2.2E-149 T 13-10-2018 IPR023995 Oxygen-independent coproporphyrinogen-III oxidase-like protein HemZ COP00_22040 f7c719843d8619894a18406705956406 502 SUPERFAMILY SSF102114 152 483 4.32E-72 T 13-10-2018 COP00_22040 f7c719843d8619894a18406705956406 502 Gene3D G3DSA:3.80.30.20 129 490 4.6E-68 T 13-10-2018 IPR023404 Radical SAM, alpha/beta horseshoe COP00_22040 f7c719843d8619894a18406705956406 502 SMART SM00729 170 394 2.6E-50 T 13-10-2018 IPR006638 Elp3/MiaB/NifB GO:0003824|GO:0051536 COP00_22040 f7c719843d8619894a18406705956406 502 Pfam PF04055 Radical SAM superfamily 178 349 3.2E-18 T 13-10-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 COP00_10490 06f8a5f85f7dc3da1db06a97f2245ed4 212 SUPERFAMILY SSF52172 1 127 1.2E-21 T 13-10-2018 IPR011006 CheY-like superfamily COP00_10490 06f8a5f85f7dc3da1db06a97f2245ed4 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 166 182 8.4E-8 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 COP00_10490 06f8a5f85f7dc3da1db06a97f2245ed4 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 152 166 8.4E-8 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 COP00_10490 06f8a5f85f7dc3da1db06a97f2245ed4 212 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 182 194 8.4E-8 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 COP00_10490 06f8a5f85f7dc3da1db06a97f2245ed4 212 SUPERFAMILY SSF46894 144 211 1.43E-16 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 COP00_10490 06f8a5f85f7dc3da1db06a97f2245ed4 212 Pfam PF00072 Response regulator receiver domain 5 116 5.4E-22 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 COP00_10490 06f8a5f85f7dc3da1db06a97f2245ed4 212 ProSitePatterns PS00622 LuxR-type HTH domain signature. 166 193 - T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 COP00_10490 06f8a5f85f7dc3da1db06a97f2245ed4 212 SMART SM00421 149 206 6.4E-19 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 COP00_10490 06f8a5f85f7dc3da1db06a97f2245ed4 212 SMART SM00448 2 116 4.4E-17 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 COP00_10490 06f8a5f85f7dc3da1db06a97f2245ed4 212 Pfam PF00196 Bacterial regulatory proteins, luxR family 150 206 7.1E-18 T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 COP00_10490 06f8a5f85f7dc3da1db06a97f2245ed4 212 Gene3D G3DSA:3.40.50.12740 3 212 4.8E-44 T 13-10-2018 COP00_19550 7aead7664ab1a0c9d9a908c2cb5d7828 248 Pfam PF03374 Phage antirepressor protein KilAC domain 134 234 3.6E-32 T 13-10-2018 IPR005039 Antirepressor protein, C-terminal GO:0003677 COP00_19550 7aead7664ab1a0c9d9a908c2cb5d7828 248 Pfam PF08346 AntA/AntB antirepressor 17 88 1.8E-23 T 13-10-2018 IPR013557 AntA/AntB antirepressor COP00_19995 414bdaf3488eac1d02f85d8fd3217f69 279 SUPERFAMILY SSF47413 32 84 2.75E-6 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 COP00_19995 414bdaf3488eac1d02f85d8fd3217f69 279 Gene3D G3DSA:1.10.260.40 14 86 1.9E-7 T 13-10-2018 COP00_19995 414bdaf3488eac1d02f85d8fd3217f69 279 Gene3D G3DSA:3.30.450.180 110 277 3.3E-20 T 13-10-2018 COP00_19995 414bdaf3488eac1d02f85d8fd3217f69 279 Pfam PF13560 Helix-turn-helix domain 33 88 5.8E-16 T 13-10-2018 COP00_19995 414bdaf3488eac1d02f85d8fd3217f69 279 SMART SM00530 13 85 3.4E-5 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 COP00_19590 0911c162beed88a033161a409c942866 810 Pfam PF08706 D5 N terminal like 337 485 1.7E-32 T 13-10-2018 IPR014818 Bacteriophage/plasmid primase, P4, C-terminal COP00_19590 0911c162beed88a033161a409c942866 810 Gene3D G3DSA:3.40.50.300 490 674 4.6E-7 T 13-10-2018 COP00_19590 0911c162beed88a033161a409c942866 810 SUPERFAMILY SSF52540 495 671 3.45E-9 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_19590 0911c162beed88a033161a409c942866 810 TIGRFAM TIGR01613 primase_Cterm: phage/plasmid primase, P4 family, C-terminal domain 436 744 2.3E-102 T 13-10-2018 IPR006500 DNA primase, phage/plasmid COP00_19590 0911c162beed88a033161a409c942866 810 SMART SM00885 337 486 2.3E-45 T 13-10-2018 IPR014818 Bacteriophage/plasmid primase, P4, C-terminal COP00_06960 a721836e9989ada18f11eefacabafcea 323 TIGRFAM TIGR00744 ROK_glcA_fam: ROK family protein (putative glucokinase) 7 319 1.4E-136 T 13-10-2018 IPR004654 Glucokinase ROK GO:0004340|GO:0005737|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 COP00_06960 a721836e9989ada18f11eefacabafcea 323 Gene3D G3DSA:3.30.420.40 7 308 4.3E-101 T 13-10-2018 COP00_06960 a721836e9989ada18f11eefacabafcea 323 SUPERFAMILY SSF53067 6 314 3.37E-69 T 13-10-2018 COP00_06960 a721836e9989ada18f11eefacabafcea 323 Gene3D G3DSA:3.30.420.40 128 297 4.3E-101 T 13-10-2018 COP00_06960 a721836e9989ada18f11eefacabafcea 323 Pfam PF00480 ROK family 7 313 9.1E-76 T 13-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 COP00_06960 a721836e9989ada18f11eefacabafcea 323 ProSitePatterns PS01125 ROK family signature. 137 164 - T 13-10-2018 IPR000600 ROK family Reactome: R-HSA-4085001|Reactome: R-HSA-4085011 COP00_14050 7ca6bd34de0cc5bc1758f0040f17ee46 290 TIGRFAM TIGR01230 agmatinase: agmatinase 10 286 7.6E-122 T 13-10-2018 IPR005925 Agmatinase-related KEGG: 00330+3.5.3.11|MetaCyc: PWY-40|MetaCyc: PWY-6305|Reactome: R-HSA-351143 COP00_14050 7ca6bd34de0cc5bc1758f0040f17ee46 290 ProSitePatterns PS01053 Arginase family signature. 214 235 - T 13-10-2018 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 COP00_14050 7ca6bd34de0cc5bc1758f0040f17ee46 290 PIRSF PIRSF036979 1 290 5.3E-96 T 13-10-2018 IPR006035 Ureohydrolase GO:0046872 COP00_14050 7ca6bd34de0cc5bc1758f0040f17ee46 290 Pfam PF00491 Arginase family 23 285 6.6E-80 T 13-10-2018 IPR006035 Ureohydrolase GO:0046872 COP00_14050 7ca6bd34de0cc5bc1758f0040f17ee46 290 Gene3D G3DSA:3.40.800.10 17 289 1.9E-95 T 13-10-2018 COP00_14050 7ca6bd34de0cc5bc1758f0040f17ee46 290 SUPERFAMILY SSF52768 15 289 1.35E-86 T 13-10-2018 IPR023696 Ureohydrolase domain superfamily COP00_10645 0f69c864361e7c30609b60aa5cb2a93d 158 Pfam PF02681 Divergent PAP2 family 5 148 1.8E-49 T 13-10-2018 IPR003832 Protein of unknown function DUF212 COP00_16370 1bbc4e9501ff9cf873745235a274f179 179 Gene3D G3DSA:3.40.50.2020 1 179 1.2E-67 T 13-10-2018 COP00_16370 1bbc4e9501ff9cf873745235a274f179 179 Pfam PF00156 Phosphoribosyl transferase domain 14 159 9.2E-26 T 13-10-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 COP00_16370 1bbc4e9501ff9cf873745235a274f179 179 TIGRFAM TIGR01203 HGPRTase: hypoxanthine phosphoribosyltransferase 8 173 3.1E-71 T 13-10-2018 IPR005904 Hypoxanthine phosphoribosyl transferase GO:0004422|GO:0005737|GO:0006166 KEGG: 00230+2.4.2.8|KEGG: 00983+2.4.2.8|MetaCyc: PWY-6599|MetaCyc: PWY-6609|MetaCyc: PWY-6610|MetaCyc: PWY-6620 COP00_16370 1bbc4e9501ff9cf873745235a274f179 179 SUPERFAMILY SSF53271 2 178 1.01E-60 T 13-10-2018 IPR029057 Phosphoribosyltransferase-like COP00_11365 1f98b874e5eff4b59ecf256d9f504a6a 179 SUPERFAMILY SSF81301 7 168 6.21E-54 T 13-10-2018 COP00_11365 1f98b874e5eff4b59ecf256d9f504a6a 179 Gene3D G3DSA:3.30.460.10 2 172 1.1E-58 T 13-10-2018 COP00_11365 1f98b874e5eff4b59ecf256d9f504a6a 179 Pfam PF04229 GrpB protein 5 164 2.5E-54 T 13-10-2018 IPR007344 GrpB/Dephospho-CoA kinase COP00_02320 d46174754378ffbb78fa5e4b232c3f65 83 Pfam PF12536 Patatin phospholipase 5 71 1.3E-4 T 13-10-2018 IPR021095 Protein of unknown function DUF3734 COP00_17575 7a4d4ab7203b448c17050dc0c1629fa1 278 SUPERFAMILY SSF51215 21 152 7.32E-27 T 13-10-2018 IPR037923 Transcription regulator HTH-like COP00_17575 7a4d4ab7203b448c17050dc0c1629fa1 278 SUPERFAMILY SSF46689 220 268 4.48E-10 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 COP00_17575 7a4d4ab7203b448c17050dc0c1629fa1 278 Gene3D G3DSA:1.10.10.60 162 214 1.8E-9 T 13-10-2018 COP00_17575 7a4d4ab7203b448c17050dc0c1629fa1 278 SMART SM00342 184 266 6.0E-25 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 COP00_17575 7a4d4ab7203b448c17050dc0c1629fa1 278 SUPERFAMILY SSF46689 170 214 6.72E-7 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 COP00_17575 7a4d4ab7203b448c17050dc0c1629fa1 278 Pfam PF12833 Helix-turn-helix domain 193 267 4.0E-17 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 COP00_17575 7a4d4ab7203b448c17050dc0c1629fa1 278 Pfam PF02311 AraC-like ligand binding domain 17 147 1.4E-25 T 13-10-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 COP00_17575 7a4d4ab7203b448c17050dc0c1629fa1 278 Gene3D G3DSA:1.10.10.60 215 271 7.0E-14 T 13-10-2018 COP00_17575 7a4d4ab7203b448c17050dc0c1629fa1 278 Gene3D G3DSA:2.60.120.10 1 89 1.4E-7 T 13-10-2018 IPR014710 RmlC-like jelly roll fold COP00_05405 b19d3292e0c4a53499ec8fe89232ab6b 183 Hamap MF_01575 UPF0398 protein . 1 177 35.513 T 13-10-2018 IPR010697 Protein of unknown function DUF1273 COP00_05405 b19d3292e0c4a53499ec8fe89232ab6b 183 Pfam PF06908 Protein of unknown function (DUF1273) 4 171 1.5E-68 T 13-10-2018 IPR010697 Protein of unknown function DUF1273 COP00_05405 b19d3292e0c4a53499ec8fe89232ab6b 183 PIRSF PIRSF021290 1 179 7.0E-70 T 13-10-2018 IPR010697 Protein of unknown function DUF1273 COP00_05405 b19d3292e0c4a53499ec8fe89232ab6b 183 SUPERFAMILY SSF102405 2 177 1.46E-61 T 13-10-2018 COP00_05405 b19d3292e0c4a53499ec8fe89232ab6b 183 Gene3D G3DSA:3.40.50.450 1 180 9.5E-67 T 13-10-2018 COP00_05450 1447de761a78ff9507a60ef957bffc17 75 Pfam PF17522 Family of unknown function (DUF5446) 1 70 1.1E-21 T 13-10-2018 IPR020252 Protein of unknown function DUF5446 COP00_05450 1447de761a78ff9507a60ef957bffc17 75 ProDom PD059812 YPPD 1 75 5.0E-17 T 13-10-2018 IPR020252 Protein of unknown function DUF5446 COP00_22055 3d4613e7c255ff7cdd38beb110b814d5 165 Gene3D G3DSA:3.30.70.1450 84 161 1.9E-19 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 COP00_22055 3d4613e7c255ff7cdd38beb110b814d5 165 SUPERFAMILY SSF116726 79 159 1.14E-17 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 COP00_22055 3d4613e7c255ff7cdd38beb110b814d5 165 Pfam PF02080 TrkA-C domain 90 157 9.4E-15 T 13-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 COP00_22055 3d4613e7c255ff7cdd38beb110b814d5 165 PIRSF PIRSF005028 1 163 7.6E-58 T 13-10-2018 IPR026278 Potassium/proton antiporter subunit KhtT COP00_02185 fb3aaa373c00611f52bcc326c69a2976 201 SMART SM00382 96 199 0.0028 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_02185 fb3aaa373c00611f52bcc326c69a2976 201 SUPERFAMILY SSF52540 46 191 3.67E-22 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_02185 fb3aaa373c00611f52bcc326c69a2976 201 PRINTS PR00819 CbxX/CfqX superfamily signature 151 170 3.6E-37 T 13-10-2018 IPR000641 CbxX/CfqX GO:0005524 COP00_02185 fb3aaa373c00611f52bcc326c69a2976 201 PRINTS PR00819 CbxX/CfqX superfamily signature 99 114 3.6E-37 T 13-10-2018 IPR000641 CbxX/CfqX GO:0005524 COP00_02185 fb3aaa373c00611f52bcc326c69a2976 201 PRINTS PR00819 CbxX/CfqX superfamily signature 137 151 3.6E-37 T 13-10-2018 IPR000641 CbxX/CfqX GO:0005524 COP00_02185 fb3aaa373c00611f52bcc326c69a2976 201 PRINTS PR00819 CbxX/CfqX superfamily signature 59 73 3.6E-37 T 13-10-2018 IPR000641 CbxX/CfqX GO:0005524 COP00_02185 fb3aaa373c00611f52bcc326c69a2976 201 PRINTS PR00819 CbxX/CfqX superfamily signature 181 193 3.6E-37 T 13-10-2018 IPR000641 CbxX/CfqX GO:0005524 COP00_02185 fb3aaa373c00611f52bcc326c69a2976 201 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 100 192 3.2E-15 T 13-10-2018 IPR003959 ATPase, AAA-type, core GO:0005524 COP00_02185 fb3aaa373c00611f52bcc326c69a2976 201 Gene3D G3DSA:3.40.50.300 31 196 1.2E-45 T 13-10-2018 COP00_14665 6d308cfe763f4ada0b57f91cbb6f5231 295 Pfam PF00005 ABC transporter 18 155 1.0E-30 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 COP00_14665 6d308cfe763f4ada0b57f91cbb6f5231 295 Pfam PF13732 Domain of unknown function (DUF4162) 208 292 1.6E-11 T 13-10-2018 IPR025302 Domain of unknown function DUF4162 COP00_14665 6d308cfe763f4ada0b57f91cbb6f5231 295 SUPERFAMILY SSF52540 2 221 9.09E-64 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_14665 6d308cfe763f4ada0b57f91cbb6f5231 295 Gene3D G3DSA:3.40.50.300 1 227 1.3E-68 T 13-10-2018 COP00_14665 6d308cfe763f4ada0b57f91cbb6f5231 295 ProSitePatterns PS00211 ABC transporters family signature. 128 142 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 COP00_14665 6d308cfe763f4ada0b57f91cbb6f5231 295 SMART SM00382 26 202 1.4E-13 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_22685 f57f8a7b5166d5af58efe414835a63a6 150 Pfam PF12690 Intracellular proteinase inhibitor 50 125 2.8E-27 T 13-10-2018 IPR020481 Intracellular proteinase inhibitor BsuPI COP00_22685 f57f8a7b5166d5af58efe414835a63a6 150 ProDom PD076312 INHIBITOR INTRACELLULAR PROTEINASE PRECURSOR SIGNAL DOMAIN SLH S-LAYER PROTEASE BSUPI 32 150 4.0E-56 T 13-10-2018 IPR020481 Intracellular proteinase inhibitor BsuPI COP00_22685 f57f8a7b5166d5af58efe414835a63a6 150 Gene3D G3DSA:2.60.40.2360 31 150 1.4E-41 T 13-10-2018 IPR038144 Intracellular proteinase inhibitor COP00_14740 324e7bb1870c11efffeaf85d9ad639b5 338 PIRSF PIRSF000267 1 338 4.9E-116 T 13-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 COP00_14740 324e7bb1870c11efffeaf85d9ad639b5 338 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 4 326 9.2E-107 T 13-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 COP00_14740 324e7bb1870c11efffeaf85d9ad639b5 338 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 2 226 1.6E-96 T 13-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 COP00_14740 324e7bb1870c11efffeaf85d9ad639b5 338 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 228 333 1.4E-37 T 13-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 COP00_01720 671458b976fedc3086a471f48fd87506 193 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 60 82 - T 13-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 COP00_01720 671458b976fedc3086a471f48fd87506 193 PIRSF PIRSF000847 1 193 5.2E-55 T 13-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 COP00_01720 671458b976fedc3086a471f48fd87506 193 Pfam PF01066 CDP-alcohol phosphatidyltransferase 3 82 1.4E-17 T 13-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 COP00_01720 671458b976fedc3086a471f48fd87506 193 Gene3D G3DSA:1.20.120.1760 4 183 1.1E-11 T 13-10-2018 COP00_01720 671458b976fedc3086a471f48fd87506 193 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 2 191 3.2E-69 T 13-10-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 COP00_20500 ea4d3bdda07330cf4fb4185dfd032c26 212 SUPERFAMILY SSF48498 89 188 1.05E-5 T 13-10-2018 IPR036271 Tetracyclin repressor-like, C-terminal domain superfamily COP00_20500 ea4d3bdda07330cf4fb4185dfd032c26 212 SUPERFAMILY SSF46689 7 87 1.9E-20 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 COP00_20500 ea4d3bdda07330cf4fb4185dfd032c26 212 Pfam PF00440 Bacterial regulatory proteins, tetR family 19 65 4.7E-16 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 COP00_20500 ea4d3bdda07330cf4fb4185dfd032c26 212 Gene3D G3DSA:1.10.10.60 2 61 2.9E-19 T 13-10-2018 COP00_20500 ea4d3bdda07330cf4fb4185dfd032c26 212 Gene3D G3DSA:1.10.357.10 62 200 6.8E-16 T 13-10-2018 COP00_20500 ea4d3bdda07330cf4fb4185dfd032c26 212 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 40 63 4.3E-10 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 COP00_20500 ea4d3bdda07330cf4fb4185dfd032c26 212 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 19 32 4.3E-10 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 COP00_14790 5e5f1d18b6cbbc2106da0b863b14e294 348 Gene3D G3DSA:2.130.10.10 4 348 1.3E-127 T 13-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 COP00_14790 5e5f1d18b6cbbc2106da0b863b14e294 348 Pfam PF10282 Lactonase, 7-bladed beta-propeller 6 345 2.5E-131 T 13-10-2018 IPR019405 Lactonase, 7-bladed beta propeller COP00_14790 5e5f1d18b6cbbc2106da0b863b14e294 348 SUPERFAMILY SSF51004 11 347 9.29E-49 T 13-10-2018 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain superfamily COP00_05675 4c3baa5c7793a81d8ac6cc4c750a6dca 148 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 1 136 37.265 T 13-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 COP00_05675 4c3baa5c7793a81d8ac6cc4c750a6dca 148 Pfam PF00334 Nucleoside diphosphate kinase 2 135 1.4E-58 T 13-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 COP00_05675 4c3baa5c7793a81d8ac6cc4c750a6dca 148 PRINTS PR01243 Nucleoside diphosphate kinase signature 4 26 1.1E-49 T 13-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 COP00_05675 4c3baa5c7793a81d8ac6cc4c750a6dca 148 PRINTS PR01243 Nucleoside diphosphate kinase signature 89 105 1.1E-49 T 13-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 COP00_05675 4c3baa5c7793a81d8ac6cc4c750a6dca 148 PRINTS PR01243 Nucleoside diphosphate kinase signature 68 85 1.1E-49 T 13-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 COP00_05675 4c3baa5c7793a81d8ac6cc4c750a6dca 148 PRINTS PR01243 Nucleoside diphosphate kinase signature 48 67 1.1E-49 T 13-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 COP00_05675 4c3baa5c7793a81d8ac6cc4c750a6dca 148 PRINTS PR01243 Nucleoside diphosphate kinase signature 112 131 1.1E-49 T 13-10-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 COP00_05675 4c3baa5c7793a81d8ac6cc4c750a6dca 148 Gene3D G3DSA:3.30.70.141 1 148 7.7E-64 T 13-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 COP00_05675 4c3baa5c7793a81d8ac6cc4c750a6dca 148 SMART SM00562 1 138 2.9E-91 T 13-10-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 COP00_05675 4c3baa5c7793a81d8ac6cc4c750a6dca 148 SUPERFAMILY SSF54919 1 148 2.36E-60 T 13-10-2018 IPR036850 Nucleoside diphosphate kinase-like domain superfamily KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 COP00_05675 4c3baa5c7793a81d8ac6cc4c750a6dca 148 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 112 120 - T 13-10-2018 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|KEGG: 00983+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 COP00_13220 5d75642c53214264eac9e5a95aba70f5 308 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 83 224 1.1E-50 T 13-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain COP00_13220 5d75642c53214264eac9e5a95aba70f5 308 Hamap MF_01140 Polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase TagU [tagU]. 9 306 48.471 T 13-10-2018 IPR023734 Polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase TagU COP00_13220 5d75642c53214264eac9e5a95aba70f5 308 TIGRFAM TIGR00350 lytR_cpsA_psr: cell envelope-related function transcriptional attenuator common domain 82 225 1.0E-55 T 13-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain COP00_13220 5d75642c53214264eac9e5a95aba70f5 308 Gene3D G3DSA:1.10.260.150 47 308 1.9E-90 T 13-10-2018 COP00_23205 8cb9aa551adb4c03b04e105addc4d516 539 Gene3D G3DSA:1.20.1740.10 2 459 1.9E-78 T 13-10-2018 COP00_23205 8cb9aa551adb4c03b04e105addc4d516 539 Pfam PF13520 Amino acid permease 8 421 3.2E-50 T 13-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 COP00_23205 8cb9aa551adb4c03b04e105addc4d516 539 PIRSF PIRSF006060 1 533 2.0E-72 T 13-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 COP00_24370 321a137cec250fb5aa0f2eea6f8a51cc 699 Pfam PF02867 Ribonucleotide reductase, barrel domain 167 683 8.0E-139 T 13-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 COP00_24370 321a137cec250fb5aa0f2eea6f8a51cc 699 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 557 579 - T 13-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 COP00_24370 321a137cec250fb5aa0f2eea6f8a51cc 699 Pfam PF08343 Ribonucleotide reductase N-terminal 8 88 6.2E-29 T 13-10-2018 IPR013554 Ribonucleotide reductase N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 COP00_24370 321a137cec250fb5aa0f2eea6f8a51cc 699 PRINTS PR01183 Ribonucleotide reductase large chain signature 242 261 6.3E-27 T 13-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 COP00_24370 321a137cec250fb5aa0f2eea6f8a51cc 699 PRINTS PR01183 Ribonucleotide reductase large chain signature 486 509 6.3E-27 T 13-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 COP00_24370 321a137cec250fb5aa0f2eea6f8a51cc 699 PRINTS PR01183 Ribonucleotide reductase large chain signature 458 480 6.3E-27 T 13-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 COP00_24370 321a137cec250fb5aa0f2eea6f8a51cc 699 PRINTS PR01183 Ribonucleotide reductase large chain signature 568 595 6.3E-27 T 13-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 COP00_24370 321a137cec250fb5aa0f2eea6f8a51cc 699 PRINTS PR01183 Ribonucleotide reductase large chain signature 375 386 6.3E-27 T 13-10-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 COP00_24370 321a137cec250fb5aa0f2eea6f8a51cc 699 Gene3D G3DSA:1.10.1650.20 285 337 2.1E-186 T 13-10-2018 COP00_24370 321a137cec250fb5aa0f2eea6f8a51cc 699 Gene3D G3DSA:3.20.70.20 151 685 2.1E-186 T 13-10-2018 COP00_24370 321a137cec250fb5aa0f2eea6f8a51cc 699 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 90 162 3.1E-16 T 13-10-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 COP00_24370 321a137cec250fb5aa0f2eea6f8a51cc 699 SUPERFAMILY SSF51998 166 688 1.1E-167 T 13-10-2018 COP00_24370 321a137cec250fb5aa0f2eea6f8a51cc 699 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 94 687 1.3E-173 T 13-10-2018 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 COP00_24370 321a137cec250fb5aa0f2eea6f8a51cc 699 SUPERFAMILY SSF48168 7 165 2.09E-47 T 13-10-2018 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 COP00_24370 321a137cec250fb5aa0f2eea6f8a51cc 699 TIGRFAM TIGR04170 RNR_1b_NrdE: ribonucleoside-diphosphate reductase, class 1b, alpha subunit 7 699 0.0 T 13-10-2018 IPR026459 Ribonucleotide reductase, class 1b, subunit NrdE KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 COP00_21620 da5cea12125e0735a7f273b730865d87 217 SUPERFAMILY SSF161098 17 201 3.53E-37 T 13-10-2018 IPR035906 MetI-like superfamily COP00_21620 da5cea12125e0735a7f273b730865d87 217 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 40 209 3.3E-26 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 COP00_21620 da5cea12125e0735a7f273b730865d87 217 Gene3D G3DSA:1.10.3720.10 16 210 2.1E-33 T 13-10-2018 IPR035906 MetI-like superfamily COP00_11265 9dfbc9857e1fe80d14f76870c80a8ce2 332 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 4 14 2.4E-5 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 COP00_11265 9dfbc9857e1fe80d14f76870c80a8ce2 332 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 14 24 2.4E-5 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 COP00_11265 9dfbc9857e1fe80d14f76870c80a8ce2 332 Gene3D G3DSA:3.40.50.2300 76 321 1.4E-70 T 13-10-2018 COP00_11265 9dfbc9857e1fe80d14f76870c80a8ce2 332 Gene3D G3DSA:3.40.50.2300 160 323 1.4E-70 T 13-10-2018 COP00_11265 9dfbc9857e1fe80d14f76870c80a8ce2 332 SUPERFAMILY SSF53822 71 330 4.32E-73 T 13-10-2018 IPR028082 Periplasmic binding protein-like I COP00_11265 9dfbc9857e1fe80d14f76870c80a8ce2 332 Gene3D G3DSA:1.10.260.40 1 60 6.5E-24 T 13-10-2018 COP00_11265 9dfbc9857e1fe80d14f76870c80a8ce2 332 ProSitePatterns PS00356 LacI-type HTH domain signature. 5 23 - T 13-10-2018 COP00_11265 9dfbc9857e1fe80d14f76870c80a8ce2 332 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 49 4.9E-19 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 COP00_11265 9dfbc9857e1fe80d14f76870c80a8ce2 332 SMART SM00354 2 72 7.6E-28 T 13-10-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 COP00_11265 9dfbc9857e1fe80d14f76870c80a8ce2 332 Pfam PF13377 Periplasmic binding protein-like domain 169 329 5.4E-39 T 13-10-2018 COP00_11265 9dfbc9857e1fe80d14f76870c80a8ce2 332 SUPERFAMILY SSF47413 2 60 1.37E-18 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 COP00_12210 9dccd08a53dfcfa9bfb58be726ac31b7 423 Pfam PF17042 Putative nucleotide-binding of sugar-metabolising enzyme 250 411 3.4E-32 T 13-10-2018 IPR031475 Four-carbon acid sugar kinase, C-terminal domain COP00_12210 9dccd08a53dfcfa9bfb58be726ac31b7 423 Gene3D G3DSA:3.40.50.10840 2 232 4.4E-68 T 13-10-2018 IPR037051 Four-carbon acid sugar kinase, N-terminal domain superfamily COP00_12210 9dccd08a53dfcfa9bfb58be726ac31b7 423 Pfam PF07005 Putative sugar-binding N-terminal domain 3 225 2.5E-59 T 13-10-2018 IPR010737 Four-carbon acid sugar kinase, N-terminal domain COP00_12210 9dccd08a53dfcfa9bfb58be726ac31b7 423 Gene3D G3DSA:3.40.980.20 236 423 2.5E-29 T 13-10-2018 COP00_12210 9dccd08a53dfcfa9bfb58be726ac31b7 423 SUPERFAMILY SSF142764 3 415 5.75E-98 T 13-10-2018 COP00_19710 2cac3c71a1656cb68aa577abfd902635 142 Gene3D G3DSA:1.20.5.320 55 107 1.4E-6 T 13-10-2018 COP00_19710 2cac3c71a1656cb68aa577abfd902635 142 Pfam PF01391 Collagen triple helix repeat (20 copies) 43 83 8.0E-9 T 13-10-2018 IPR008160 Collagen triple helix repeat COP00_18485 50c259df53b8bea26b173a8d212dabf2 522 SUPERFAMILY SSF52540 4 227 2.5E-53 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_18485 50c259df53b8bea26b173a8d212dabf2 522 Pfam PF00005 ABC transporter 21 172 6.3E-29 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 COP00_18485 50c259df53b8bea26b173a8d212dabf2 522 SMART SM00382 289 490 0.0022 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_18485 50c259df53b8bea26b173a8d212dabf2 522 SMART SM00382 30 228 1.1E-9 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_18485 50c259df53b8bea26b173a8d212dabf2 522 ProSitePatterns PS00211 ABC transporters family signature. 409 423 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 COP00_18485 50c259df53b8bea26b173a8d212dabf2 522 Pfam PF00005 ABC transporter 280 436 1.5E-19 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 COP00_18485 50c259df53b8bea26b173a8d212dabf2 522 Gene3D G3DSA:3.40.50.300 3 239 4.2E-55 T 13-10-2018 COP00_18485 50c259df53b8bea26b173a8d212dabf2 522 Gene3D G3DSA:3.40.50.300 246 510 5.8E-43 T 13-10-2018 COP00_18485 50c259df53b8bea26b173a8d212dabf2 522 SUPERFAMILY SSF52540 250 494 9.17E-44 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_20270 a677187bc2430444f21ef58b63d9100b 100 SUPERFAMILY SSF48295 3 95 3.56E-32 T 13-10-2018 IPR010921 Trp repressor/replication initiator GO:0043565 COP00_20270 a677187bc2430444f21ef58b63d9100b 100 Gene3D G3DSA:1.10.1270.10 2 100 7.6E-39 T 13-10-2018 IPR038116 TrpR-like superfamily COP00_20270 a677187bc2430444f21ef58b63d9100b 100 TIGRFAM TIGR02531 yecD_yerC: TrpR homolog YerC/YecD 7 94 1.3E-49 T 13-10-2018 IPR013368 TrpR homologue YerC/YecD COP00_20270 a677187bc2430444f21ef58b63d9100b 100 Pfam PF01371 Trp repressor protein 10 94 6.2E-34 T 13-10-2018 IPR000831 Trp repressor GO:0003700|GO:0005622|GO:0006355 COP00_20270 a677187bc2430444f21ef58b63d9100b 100 PIRSF PIRSF012508 1 100 1.9E-47 T 13-10-2018 IPR013368 TrpR homologue YerC/YecD COP00_12525 dde5b5837ad5fe10f9a77e7d4732c3e6 276 Hamap MF_01408 Flavin-dependent thymidylate synthase [thyX]. 6 276 22.245 T 13-10-2018 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00670+2.1.1.148|MetaCyc: PWY-6545 COP00_12525 dde5b5837ad5fe10f9a77e7d4732c3e6 276 Pfam PF02511 Thymidylate synthase complementing protein 44 267 2.3E-52 T 13-10-2018 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00670+2.1.1.148|MetaCyc: PWY-6545 COP00_12525 dde5b5837ad5fe10f9a77e7d4732c3e6 276 SUPERFAMILY SSF69796 57 275 7.32E-44 T 13-10-2018 IPR036098 Thymidylate synthase ThyX superfamily GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00670+2.1.1.148|MetaCyc: PWY-6545 COP00_12525 dde5b5837ad5fe10f9a77e7d4732c3e6 276 Gene3D G3DSA:3.30.1360.170 43 276 4.8E-55 T 13-10-2018 COP00_12525 dde5b5837ad5fe10f9a77e7d4732c3e6 276 TIGRFAM TIGR02170 thyX: thymidylate synthase, flavin-dependent 22 273 2.8E-57 T 13-10-2018 IPR003669 Thymidylate synthase ThyX GO:0006231|GO:0050660|GO:0050797 KEGG: 00240+2.1.1.148|KEGG: 00670+2.1.1.148|MetaCyc: PWY-6545 COP00_07980 cd610bbe597e84a4b9e85fc7b0e6658d 267 Gene3D G3DSA:3.40.50.10090 38 174 5.3E-78 T 13-10-2018 COP00_07980 cd610bbe597e84a4b9e85fc7b0e6658d 267 SUPERFAMILY SSF69618 7 266 7.46E-54 T 13-10-2018 IPR036108 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase superfamily GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 COP00_07980 cd610bbe597e84a4b9e85fc7b0e6658d 267 Gene3D G3DSA:3.40.50.10090 14 258 5.3E-78 T 13-10-2018 COP00_07980 cd610bbe597e84a4b9e85fc7b0e6658d 267 Pfam PF02602 Uroporphyrinogen-III synthase HemD 19 259 1.0E-37 T 13-10-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 COP00_03015 b5b8c26fb64b6f8dea75d014f7085031 118 Pfam PF01981 Peptidyl-tRNA hydrolase PTH2 4 117 3.8E-17 T 13-10-2018 IPR002833 Peptidyl-tRNA hydrolase, PTH2 GO:0004045 MetaCyc: PWY-6308 COP00_03015 b5b8c26fb64b6f8dea75d014f7085031 118 SUPERFAMILY SSF102462 3 117 8.55E-22 T 13-10-2018 IPR023476 Peptidyl-tRNA hydrolase II domain superfamily MetaCyc: PWY-6308 COP00_03015 b5b8c26fb64b6f8dea75d014f7085031 118 Gene3D G3DSA:3.40.1490.10 1 117 1.3E-20 T 13-10-2018 IPR023476 Peptidyl-tRNA hydrolase II domain superfamily MetaCyc: PWY-6308 COP00_15725 45814341dcc2f33fe0f456e75f38a977 235 SUPERFAMILY SSF52172 2 128 1.42E-44 T 13-10-2018 IPR011006 CheY-like superfamily COP00_15725 45814341dcc2f33fe0f456e75f38a977 235 Pfam PF00486 Transcriptional regulatory protein, C terminal 154 229 8.0E-28 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 COP00_15725 45814341dcc2f33fe0f456e75f38a977 235 Gene3D G3DSA:1.10.10.10 132 235 1.7E-42 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_15725 45814341dcc2f33fe0f456e75f38a977 235 SUPERFAMILY SSF46894 130 230 1.11E-31 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 COP00_15725 45814341dcc2f33fe0f456e75f38a977 235 SMART SM00862 153 229 1.6E-28 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 COP00_15725 45814341dcc2f33fe0f456e75f38a977 235 Gene3D G3DSA:3.40.50.2300 1 131 3.5E-41 T 13-10-2018 COP00_15725 45814341dcc2f33fe0f456e75f38a977 235 Pfam PF00072 Response regulator receiver domain 5 114 4.8E-31 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 COP00_15725 45814341dcc2f33fe0f456e75f38a977 235 SMART SM00448 3 113 5.9E-49 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 COP00_10380 c53f18973d7fc892aa753201e6907f4e 624 Pfam PF00912 Transglycosylase 62 238 1.4E-59 T 13-10-2018 IPR001264 Glycosyl transferase, family 51 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 COP00_10380 c53f18973d7fc892aa753201e6907f4e 624 Gene3D G3DSA:1.10.3810.10 74 268 2.4E-165 T 13-10-2018 IPR036950 Penicillin binding protein transglycosylase domain KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 COP00_10380 c53f18973d7fc892aa753201e6907f4e 624 Gene3D G3DSA:3.40.710.10 328 603 2.4E-165 T 13-10-2018 COP00_10380 c53f18973d7fc892aa753201e6907f4e 624 SUPERFAMILY SSF53955 54 263 3.94E-70 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily COP00_10380 c53f18973d7fc892aa753201e6907f4e 624 Pfam PF00905 Penicillin binding protein transpeptidase domain 350 587 3.1E-27 T 13-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 COP00_10380 c53f18973d7fc892aa753201e6907f4e 624 SUPERFAMILY SSF56601 220 624 5.05E-92 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like COP00_10380 c53f18973d7fc892aa753201e6907f4e 624 Gene3D G3DSA:3.90.1310.20 58 536 2.4E-165 T 13-10-2018 COP00_07145 dd38c242e80233a585de5ae7166781a1 129 Pfam PF15594 Immunity protein 50 9 124 1.5E-29 T 13-10-2018 IPR028957 Immunity protein 50 COP00_17005 f3e82f0033fc594d580be332b3ef7381 187 TIGRFAM TIGR02948 SigW_bacill: RNA polymerase sigma-W factor 1 187 3.0E-111 T 13-10-2018 IPR014294 RNA polymerase sigma-W, bacillaceae COP00_17005 f3e82f0033fc594d580be332b3ef7381 187 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 19 184 2.4E-35 T 13-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 COP00_17005 f3e82f0033fc594d580be332b3ef7381 187 Pfam PF08281 Sigma-70, region 4 130 180 1.3E-16 T 13-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 COP00_17005 f3e82f0033fc594d580be332b3ef7381 187 Pfam PF04542 Sigma-70 region 2 25 89 2.2E-22 T 13-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 COP00_17005 f3e82f0033fc594d580be332b3ef7381 187 SUPERFAMILY SSF88946 8 98 3.14E-30 T 13-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 COP00_17005 f3e82f0033fc594d580be332b3ef7381 187 Gene3D G3DSA:1.10.10.10 109 186 2.9E-21 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_17005 f3e82f0033fc594d580be332b3ef7381 187 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 45 76 - T 13-10-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 COP00_17005 f3e82f0033fc594d580be332b3ef7381 187 Gene3D G3DSA:1.10.1740.10 5 108 6.6E-32 T 13-10-2018 COP00_17005 f3e82f0033fc594d580be332b3ef7381 187 SUPERFAMILY SSF88659 117 185 1.35E-17 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like COP00_00800 af2027abdb7eac9ff3165304b13b9174 294 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 180 292 4.8E-29 T 13-10-2018 IPR013752 Ketopantoate reductase, C-terminal domain COP00_00800 af2027abdb7eac9ff3165304b13b9174 294 Gene3D G3DSA:3.40.50.720 1 171 2.7E-53 T 13-10-2018 COP00_00800 af2027abdb7eac9ff3165304b13b9174 294 SUPERFAMILY SSF48179 172 292 1.09E-26 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 COP00_00800 af2027abdb7eac9ff3165304b13b9174 294 Pfam PF02558 Ketopantoate reductase PanE/ApbA 3 146 6.1E-31 T 13-10-2018 IPR013332 Ketopantoate reductase, N-terminal domain COP00_00800 af2027abdb7eac9ff3165304b13b9174 294 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 2 293 3.7E-74 T 13-10-2018 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0008677|GO:0015940 KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654 COP00_00800 af2027abdb7eac9ff3165304b13b9174 294 SUPERFAMILY SSF51735 2 157 3.6E-19 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily COP00_00800 af2027abdb7eac9ff3165304b13b9174 294 Gene3D G3DSA:1.10.1040.10 172 294 3.3E-44 T 13-10-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 COP00_02240 9e1057614138bafdadc826d487a22191 384 Gene3D G3DSA:1.25.40.10 155 384 8.7E-59 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 COP00_02240 9e1057614138bafdadc826d487a22191 384 Pfam PF13424 Tetratricopeptide repeat 236 305 8.8E-8 T 13-10-2018 COP00_02240 9e1057614138bafdadc826d487a22191 384 SUPERFAMILY SSF48452 195 379 3.6E-12 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 COP00_02240 9e1057614138bafdadc826d487a22191 384 SUPERFAMILY SSF48452 99 224 2.38E-5 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 COP00_02240 9e1057614138bafdadc826d487a22191 384 SMART SM00028 273 306 1.7 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 COP00_02240 9e1057614138bafdadc826d487a22191 384 SMART SM00028 193 226 110.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 COP00_02240 9e1057614138bafdadc826d487a22191 384 SMART SM00028 99 132 88.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 COP00_02240 9e1057614138bafdadc826d487a22191 384 SMART SM00028 234 267 11.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 COP00_02240 9e1057614138bafdadc826d487a22191 384 Gene3D G3DSA:1.25.40.10 1 154 2.7E-48 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 COP00_11145 d3d6269b8f0871b31eadb9610bf5b32c 483 Pfam PF03323 Bacillus/Clostridium GerA spore germination protein 21 466 1.5E-161 T 13-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 COP00_11145 d3d6269b8f0871b31eadb9610bf5b32c 483 PIRSF PIRSF005690 1 482 3.7E-172 T 13-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 COP00_11985 b169896c5e921da563958be85a9ada05 253 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 2 249 61.221 T 13-10-2018 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 COP00_11985 b169896c5e921da563958be85a9ada05 253 Pfam PF00121 Triosephosphate isomerase 5 246 4.3E-94 T 13-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 COP00_11985 b169896c5e921da563958be85a9ada05 253 ProSitePatterns PS00171 Triosephosphate isomerase active site. 165 175 - T 13-10-2018 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 COP00_11985 b169896c5e921da563958be85a9ada05 253 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 5 240 2.3E-57 T 13-10-2018 IPR000652 Triosephosphate isomerase GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 COP00_11985 b169896c5e921da563958be85a9ada05 253 Gene3D G3DSA:3.20.20.70 2 253 2.0E-104 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 COP00_11985 b169896c5e921da563958be85a9ada05 253 SUPERFAMILY SSF51351 1 248 2.88E-93 T 13-10-2018 IPR035990 Triosephosphate isomerase superfamily GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 COP00_15225 0ea63efdf404910b6a3230eca9c13d3f 707 Gene3D G3DSA:2.60.120.260 328 476 3.8E-12 T 13-10-2018 IPR008979 Galactose-binding-like domain superfamily COP00_15225 0ea63efdf404910b6a3230eca9c13d3f 707 Pfam PF03170 Bacterial cellulose synthase subunit 49 216 3.6E-20 T 13-10-2018 IPR018513 Cellulose synthase BcsB, bacterial GO:0006011|GO:0016020 COP00_15225 0ea63efdf404910b6a3230eca9c13d3f 707 Pfam PF03170 Bacterial cellulose synthase subunit 385 527 7.5E-12 T 13-10-2018 IPR018513 Cellulose synthase BcsB, bacterial GO:0006011|GO:0016020 COP00_15225 0ea63efdf404910b6a3230eca9c13d3f 707 Gene3D G3DSA:2.60.120.260 36 166 1.1E-13 T 13-10-2018 IPR008979 Galactose-binding-like domain superfamily COP00_06685 b4ae5ee5ae464482ec512ed4f60b0aeb 180 Pfam PF11085 Conserved membrane protein YqhR 9 170 5.0E-77 T 13-10-2018 IPR024563 Uncharacterised protein family YqhR COP00_06685 b4ae5ee5ae464482ec512ed4f60b0aeb 180 ProDom PD101610 MEMBRANE YQHR BH2802 TRANSMEMBRANE IG 11 163 2.0E-61 T 13-10-2018 IPR024563 Uncharacterised protein family YqhR COP00_09775 759d208bcba4552f4af87c187d162a93 268 SUPERFAMILY SSF51219 6 216 3.14E-34 T 13-10-2018 IPR016031 Tryptophan RNA-binding attenuator protein-like domain superfamily COP00_09775 759d208bcba4552f4af87c187d162a93 268 Pfam PF01987 Mitochondrial biogenesis AIM24 11 207 4.4E-20 T 13-10-2018 IPR002838 Mitochondrial biogenesis protein AIM24 COP00_09775 759d208bcba4552f4af87c187d162a93 268 Gene3D G3DSA:3.60.160.10 2 228 1.2E-14 T 13-10-2018 IPR036983 Mitochondrial biogenesis AIM24 superfamily COP00_15405 309ae811050d13e3475d430480320577 235 Pfam PF00072 Response regulator receiver domain 4 112 3.7E-24 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 COP00_15405 309ae811050d13e3475d430480320577 235 SUPERFAMILY SSF46894 128 227 2.83E-21 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 COP00_15405 309ae811050d13e3475d430480320577 235 SUPERFAMILY SSF52172 2 125 1.71E-34 T 13-10-2018 IPR011006 CheY-like superfamily COP00_15405 309ae811050d13e3475d430480320577 235 SMART SM00448 2 112 4.2E-34 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 COP00_15405 309ae811050d13e3475d430480320577 235 Pfam PF00486 Transcriptional regulatory protein, C terminal 153 225 6.4E-20 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 COP00_15405 309ae811050d13e3475d430480320577 235 Gene3D G3DSA:1.10.10.10 128 228 4.5E-22 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_15405 309ae811050d13e3475d430480320577 235 Gene3D G3DSA:3.40.50.2300 1 127 7.8E-31 T 13-10-2018 COP00_15405 309ae811050d13e3475d430480320577 235 SMART SM00862 149 225 3.0E-16 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 COP00_13635 76bb7a5d262bf8755987c24cde0fd7ef 190 SUPERFAMILY SSF52096 12 190 7.46E-65 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily COP00_13635 76bb7a5d262bf8755987c24cde0fd7ef 190 Pfam PF00574 Clp protease 14 190 1.1E-78 T 13-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA COP00_13635 76bb7a5d262bf8755987c24cde0fd7ef 190 Gene3D G3DSA:3.90.226.10 1 190 2.2E-76 T 13-10-2018 COP00_13635 76bb7a5d262bf8755987c24cde0fd7ef 190 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 3 190 39.217 T 13-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 COP00_13635 76bb7a5d262bf8755987c24cde0fd7ef 190 PRINTS PR00127 Clp protease catalytic subunit P signature 90 107 3.6E-48 T 13-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 COP00_13635 76bb7a5d262bf8755987c24cde0fd7ef 190 PRINTS PR00127 Clp protease catalytic subunit P signature 168 187 3.6E-48 T 13-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 COP00_13635 76bb7a5d262bf8755987c24cde0fd7ef 190 PRINTS PR00127 Clp protease catalytic subunit P signature 19 34 3.6E-48 T 13-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 COP00_13635 76bb7a5d262bf8755987c24cde0fd7ef 190 PRINTS PR00127 Clp protease catalytic subunit P signature 59 79 3.6E-48 T 13-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 COP00_13635 76bb7a5d262bf8755987c24cde0fd7ef 190 PRINTS PR00127 Clp protease catalytic subunit P signature 111 130 3.6E-48 T 13-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 COP00_13635 76bb7a5d262bf8755987c24cde0fd7ef 190 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 90 101 - T 13-10-2018 IPR018215 ClpP, Ser active site COP00_01195 0ea32157b3be64db248627085aecddaf 188 Hamap MF_01814 Transcription factor FapR [fapR]. 1 188 39.045 T 13-10-2018 IPR017275 Transcription factor FapR GO:0003700|GO:0045717|GO:0045892 COP00_01195 0ea32157b3be64db248627085aecddaf 188 SUPERFAMILY SSF54637 74 183 1.76E-26 T 13-10-2018 IPR029069 HotDog domain superfamily COP00_01195 0ea32157b3be64db248627085aecddaf 188 PIRSF PIRSF037733 1 188 3.7E-84 T 13-10-2018 IPR017275 Transcription factor FapR GO:0003700|GO:0045717|GO:0045892 COP00_01195 0ea32157b3be64db248627085aecddaf 188 Gene3D G3DSA:1.10.10.10 1 60 1.1E-27 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_01195 0ea32157b3be64db248627085aecddaf 188 Pfam PF03061 Thioesterase superfamily 110 166 3.0E-4 T 13-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 COP00_01195 0ea32157b3be64db248627085aecddaf 188 Gene3D G3DSA:3.10.129.10 68 188 1.3E-39 T 13-10-2018 COP00_15575 fedace8c834357766cd1162ebef4a5c3 336 Gene3D G3DSA:1.10.3470.10 9 334 6.9E-88 T 13-10-2018 IPR037294 ABC transporter, BtuC-like COP00_15575 fedace8c834357766cd1162ebef4a5c3 336 Pfam PF01032 FecCD transport family 23 330 8.2E-88 T 13-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 COP00_15575 fedace8c834357766cd1162ebef4a5c3 336 SUPERFAMILY SSF81345 9 330 1.07E-79 T 13-10-2018 IPR037294 ABC transporter, BtuC-like COP00_07795 c55d4fff9c1df7cb01ab53699ff05db3 455 Pfam PF00324 Amino acid permease 15 454 2.9E-124 T 13-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 COP00_07795 c55d4fff9c1df7cb01ab53699ff05db3 455 ProSitePatterns PS00218 Amino acid permeases signature. 40 71 - T 13-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 COP00_07795 c55d4fff9c1df7cb01ab53699ff05db3 455 PIRSF PIRSF006060 1 454 3.7E-77 T 13-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 COP00_07795 c55d4fff9c1df7cb01ab53699ff05db3 455 Gene3D G3DSA:1.20.1740.10 6 454 2.0E-62 T 13-10-2018 COP00_12825 3fb1371c516421838a68963dc69c1444 296 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 9 292 42.449 T 13-10-2018 IPR005337 RapZ-like family GO:0005524 COP00_12825 3fb1371c516421838a68963dc69c1444 296 SUPERFAMILY SSF52540 11 164 9.52E-13 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_12825 3fb1371c516421838a68963dc69c1444 296 Pfam PF03668 P-loop ATPase protein family 9 293 4.6E-138 T 13-10-2018 IPR005337 RapZ-like family GO:0005524 COP00_12825 3fb1371c516421838a68963dc69c1444 296 Gene3D G3DSA:3.40.50.300 6 178 5.0E-5 T 13-10-2018 COP00_12825 3fb1371c516421838a68963dc69c1444 296 PIRSF PIRSF005052 9 295 1.4E-108 T 13-10-2018 IPR005337 RapZ-like family GO:0005524 COP00_14420 9a1540cdef93812c9b865020aceb0512 89 Pfam PF17279 Family of unknown function (DUF5344) 2 89 1.5E-25 T 13-10-2018 COP00_14420 9a1540cdef93812c9b865020aceb0512 89 ProDom PD061728 YWQI YWQIA COIL COILED 5 87 1.0E-29 T 13-10-2018 IPR020299 Uncharacterised protein family YwqI COP00_09740 a7d3fbab836e01592860b2e5b6c4f5cf 527 Pfam PF01293 Phosphoenolpyruvate carboxykinase 18 480 2.4E-222 T 13-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 COP00_09740 a7d3fbab836e01592860b2e5b6c4f5cf 527 SUPERFAMILY SSF53795 213 515 8.93E-134 T 13-10-2018 COP00_09740 a7d3fbab836e01592860b2e5b6c4f5cf 527 Gene3D G3DSA:2.170.8.10 38 330 5.0E-223 T 13-10-2018 COP00_09740 a7d3fbab836e01592860b2e5b6c4f5cf 527 Gene3D G3DSA:3.40.449.10 28 213 5.0E-223 T 13-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 COP00_09740 a7d3fbab836e01592860b2e5b6c4f5cf 527 TIGRFAM TIGR00224 pckA: phosphoenolpyruvate carboxykinase (ATP) 1 525 7.1E-260 T 13-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 COP00_09740 a7d3fbab836e01592860b2e5b6c4f5cf 527 PIRSF PIRSF006294 1 525 1.4E-238 T 13-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 COP00_09740 a7d3fbab836e01592860b2e5b6c4f5cf 527 Gene3D G3DSA:3.90.228.20 214 513 5.0E-223 T 13-10-2018 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 COP00_09740 a7d3fbab836e01592860b2e5b6c4f5cf 527 Hamap MF_00453 Phosphoenolpyruvate carboxykinase (ATP) [pckA]. 12 527 55.917 T 13-10-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 COP00_09740 a7d3fbab836e01592860b2e5b6c4f5cf 527 SUPERFAMILY SSF68923 11 212 6.98E-79 T 13-10-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 COP00_19095 32fbc43d9df488ce27ee3d60460a7fd6 199 SMART SM00331 9 198 1.3E-47 T 13-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 COP00_19095 32fbc43d9df488ce27ee3d60460a7fd6 199 Gene3D G3DSA:3.60.40.10 2 198 1.5E-44 T 13-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 COP00_19095 32fbc43d9df488ce27ee3d60460a7fd6 199 SUPERFAMILY SSF81606 10 195 1.44E-15 T 13-10-2018 IPR036457 PPM-type phosphatase domain superfamily KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 COP00_19095 32fbc43d9df488ce27ee3d60460a7fd6 199 Pfam PF07228 Stage II sporulation protein E (SpoIIE) 35 158 6.0E-12 T 13-10-2018 IPR001932 PPM-type phosphatase domain GO:0003824 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 COP00_10410 4e6d2f1e0626c03681c54ffba2c76332 511 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 COP00_10410 4e6d2f1e0626c03681c54ffba2c76332 511 SUPERFAMILY SSF52540 257 490 5.87E-42 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_10410 4e6d2f1e0626c03681c54ffba2c76332 511 Pfam PF00005 ABC transporter 274 429 2.3E-16 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 COP00_10410 4e6d2f1e0626c03681c54ffba2c76332 511 Gene3D G3DSA:3.40.50.300 254 510 6.1E-38 T 13-10-2018 COP00_10410 4e6d2f1e0626c03681c54ffba2c76332 511 ProSitePatterns PS00211 ABC transporters family signature. 402 416 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 COP00_10410 4e6d2f1e0626c03681c54ffba2c76332 511 SUPERFAMILY SSF52540 3 226 3.03E-57 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_10410 4e6d2f1e0626c03681c54ffba2c76332 511 Gene3D G3DSA:3.40.50.300 1 237 1.7E-55 T 13-10-2018 COP00_10410 4e6d2f1e0626c03681c54ffba2c76332 511 Pfam PF00005 ABC transporter 21 169 3.4E-30 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 COP00_10410 4e6d2f1e0626c03681c54ffba2c76332 511 SMART SM00382 29 217 3.1E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_17270 83ba509ddcee05b9f025c1523e113c79 351 Pfam PF02486 Replication initiation factor 127 326 2.6E-65 T 13-10-2018 IPR003491 Replication initiation factor GO:0003677|GO:0003916|GO:0006270 COP00_23295 b406ec78a9ae2efe902abf968e4d8733 61 Gene3D G3DSA:1.10.260.40 1 61 7.9E-8 T 13-10-2018 COP00_23295 b406ec78a9ae2efe902abf968e4d8733 61 Pfam PF01381 Helix-turn-helix 10 43 9.6E-7 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 COP00_23295 b406ec78a9ae2efe902abf968e4d8733 61 SUPERFAMILY SSF47413 4 51 1.88E-9 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 COP00_05770 b767b6d1163636b7006184a034555c9a 226 TIGRFAM TIGR00017 cmk: cytidylate kinase 4 218 4.3E-90 T 13-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 COP00_05770 b767b6d1163636b7006184a034555c9a 226 Gene3D G3DSA:3.40.50.300 1 224 1.0E-89 T 13-10-2018 COP00_05770 b767b6d1163636b7006184a034555c9a 226 SUPERFAMILY SSF52540 5 222 5.18E-47 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_05770 b767b6d1163636b7006184a034555c9a 226 Hamap MF_00238 Cytidylate kinase [cmk]. 5 224 34.285 T 13-10-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 COP00_05770 b767b6d1163636b7006184a034555c9a 226 Pfam PF02224 Cytidylate kinase 7 221 3.0E-83 T 13-10-2018 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 COP00_07900 775b35a8c7a42e9ab7def8f52b0ce51d 431 SUPERFAMILY SSF53383 24 418 2.01E-56 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase COP00_07900 775b35a8c7a42e9ab7def8f52b0ce51d 431 Gene3D G3DSA:3.40.640.10 1 324 5.1E-77 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 COP00_07900 775b35a8c7a42e9ab7def8f52b0ce51d 431 Gene3D G3DSA:3.90.1150.10 325 428 8.8E-38 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 COP00_07900 775b35a8c7a42e9ab7def8f52b0ce51d 431 Pfam PF00155 Aminotransferase class I and II 80 421 3.4E-29 T 13-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 COP00_08290 bc052f17105bf24f4d4d8f16706847b5 127 TIGRFAM TIGR04086 TIGR04086_membr: putative membrane protein, TIGR04086 family 10 122 1.3E-27 T 13-10-2018 IPR023804 Protein of unknown function DUF3792, transmembrane COP00_08290 bc052f17105bf24f4d4d8f16706847b5 127 Pfam PF12670 Protein of unknown function (DUF3792) 9 119 3.5E-22 T 13-10-2018 IPR023804 Protein of unknown function DUF3792, transmembrane COP00_16635 1b073ed66f49954d87071f0551ba4ab8 201 SUPERFAMILY SSF53335 7 200 1.61E-38 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase COP00_16635 1b073ed66f49954d87071f0551ba4ab8 201 Gene3D G3DSA:3.40.50.150 6 201 6.9E-49 T 13-10-2018 COP00_16635 1b073ed66f49954d87071f0551ba4ab8 201 Pfam PF05175 Methyltransferase small domain 28 197 5.2E-50 T 13-10-2018 IPR007848 Methyltransferase small domain GO:0008168 COP00_01935 e10b6ab4cffda7c31b5c4d2ecca64592 449 Pfam PF01979 Amidohydrolase family 54 415 1.3E-30 T 13-10-2018 IPR006680 Amidohydrolase-related GO:0016787 COP00_01935 e10b6ab4cffda7c31b5c4d2ecca64592 449 Gene3D G3DSA:2.30.40.10 11 421 1.1E-110 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 COP00_01935 e10b6ab4cffda7c31b5c4d2ecca64592 449 SUPERFAMILY SSF51556 57 367 7.88E-65 T 13-10-2018 IPR032466 Metal-dependent hydrolase COP00_01935 e10b6ab4cffda7c31b5c4d2ecca64592 449 SUPERFAMILY SSF51338 3 440 3.43E-28 T 13-10-2018 IPR011059 Metal-dependent hydrolase, composite domain superfamily GO:0016810 COP00_01935 e10b6ab4cffda7c31b5c4d2ecca64592 449 Gene3D G3DSA:3.20.20.140 59 426 1.1E-110 T 13-10-2018 COP00_09835 faa6a8e6a90a8e5d1762d4fabe88381f 349 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 11 338 6.5E-35 T 13-10-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 COP00_08135 9e3d0030fb5b14911213e9560d0a8749 352 Pfam PF01594 AI-2E family transporter 14 345 2.8E-75 T 13-10-2018 IPR002549 Transmembrane protein TqsA-like COP00_05965 fb39f301badbe833ce01e6756628f44a 124 Pfam PF00583 Acetyltransferase (GNAT) family 30 93 1.5E-10 T 13-10-2018 IPR000182 GNAT domain COP00_05965 fb39f301badbe833ce01e6756628f44a 124 Gene3D G3DSA:3.40.630.30 5 97 8.9E-14 T 13-10-2018 COP00_05965 fb39f301badbe833ce01e6756628f44a 124 SUPERFAMILY SSF55729 5 93 1.72E-13 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase COP00_16595 631bc8da7023182b1ad0e70e14e8929f 223 PIRSF PIRSF002939 6 223 6.1E-112 T 13-10-2018 IPR016371 RNA polymerase sigma-H factor GO:0003677|GO:0006351|GO:0016987 COP00_16595 631bc8da7023182b1ad0e70e14e8929f 223 ProSitePatterns PS00622 LuxR-type HTH domain signature. 184 211 - T 13-10-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 COP00_16595 631bc8da7023182b1ad0e70e14e8929f 223 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 67 80 - T 13-10-2018 IPR000943 RNA polymerase sigma-70 GO:0003700|GO:0006352|GO:0006355 COP00_16595 631bc8da7023182b1ad0e70e14e8929f 223 SUPERFAMILY SSF88946 25 112 9.94E-22 T 13-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 COP00_16595 631bc8da7023182b1ad0e70e14e8929f 223 TIGRFAM TIGR02859 spore_sigH: RNA polymerase sigma-H factor 21 217 6.4E-112 T 13-10-2018 IPR014218 RNA polymerase sigma-H type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 COP00_16595 631bc8da7023182b1ad0e70e14e8929f 223 Pfam PF08281 Sigma-70, region 4 169 212 2.4E-10 T 13-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 COP00_16595 631bc8da7023182b1ad0e70e14e8929f 223 Pfam PF04542 Sigma-70 region 2 43 112 2.1E-14 T 13-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 COP00_16595 631bc8da7023182b1ad0e70e14e8929f 223 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 38 216 7.9E-28 T 13-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 COP00_16595 631bc8da7023182b1ad0e70e14e8929f 223 SUPERFAMILY SSF88659 130 217 1.96E-11 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like COP00_11235 d78eecbcbaf4ab88e8065413e5ccb060 263 Gene3D G3DSA:3.40.50.720 1 260 1.4E-73 T 13-10-2018 COP00_11235 d78eecbcbaf4ab88e8065413e5ccb060 263 Pfam PF00106 short chain dehydrogenase 8 195 3.4E-51 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_11235 d78eecbcbaf4ab88e8065413e5ccb060 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 1.2E-7 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_11235 d78eecbcbaf4ab88e8065413e5ccb060 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 1.2E-7 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_11235 d78eecbcbaf4ab88e8065413e5ccb060 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 1.2E-7 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_11235 d78eecbcbaf4ab88e8065413e5ccb060 263 SUPERFAMILY SSF51735 6 259 1.26E-71 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily COP00_11235 d78eecbcbaf4ab88e8065413e5ccb060 263 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 COP00_11235 d78eecbcbaf4ab88e8065413e5ccb060 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 7.2E-34 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_11235 d78eecbcbaf4ab88e8065413e5ccb060 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 7.2E-34 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_11235 d78eecbcbaf4ab88e8065413e5ccb060 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 7.2E-34 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_11235 d78eecbcbaf4ab88e8065413e5ccb060 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 223 243 7.2E-34 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_11235 d78eecbcbaf4ab88e8065413e5ccb060 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 7.2E-34 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_11235 d78eecbcbaf4ab88e8065413e5ccb060 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 7.2E-34 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_17805 6bc2acc677ffb0914da5f5a3889efab4 354 Pfam PF05225 helix-turn-helix, Psq domain 294 340 9.3E-10 T 13-10-2018 IPR007889 DNA binding HTH domain, Psq-type GO:0003677 COP00_17805 6bc2acc677ffb0914da5f5a3889efab4 354 Gene3D G3DSA:3.10.450.50 1 25 6.6E-6 T 13-10-2018 COP00_17805 6bc2acc677ffb0914da5f5a3889efab4 354 SUPERFAMILY SSF103642 4 25 9.48E-7 T 13-10-2018 COP00_17805 6bc2acc677ffb0914da5f5a3889efab4 354 Pfam PF02810 SEC-C motif 6 23 3.1E-8 T 13-10-2018 IPR004027 SEC-C motif COP00_00790 fe7c57e59c2784ec9ad0dabcb595acae 201 Pfam PF13921 Myb-like DNA-binding domain 9 60 4.3E-5 T 13-10-2018 COP00_00790 fe7c57e59c2784ec9ad0dabcb595acae 201 SUPERFAMILY SSF46689 7 62 5.95E-5 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 COP00_00790 fe7c57e59c2784ec9ad0dabcb595acae 201 TIGRFAM TIGR02894 DNA_bind_RsfA: transcription factor, RsfA family 4 78 8.2E-44 T 13-10-2018 IPR014243 Transcription factor, RsfA COP00_01700 ecd11d2acd136ace184e99c4f9dd0a0a 243 Gene3D G3DSA:3.40.50.720 1 243 2.2E-67 T 13-10-2018 COP00_01700 ecd11d2acd136ace184e99c4f9dd0a0a 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 3.4E-5 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_01700 ecd11d2acd136ace184e99c4f9dd0a0a 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 3.4E-5 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_01700 ecd11d2acd136ace184e99c4f9dd0a0a 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 139 3.4E-5 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_01700 ecd11d2acd136ace184e99c4f9dd0a0a 243 SUPERFAMILY SSF51735 3 242 1.21E-70 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily COP00_01700 ecd11d2acd136ace184e99c4f9dd0a0a 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 2.4E-37 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_01700 ecd11d2acd136ace184e99c4f9dd0a0a 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 205 225 2.4E-37 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_01700 ecd11d2acd136ace184e99c4f9dd0a0a 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 2.4E-37 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_01700 ecd11d2acd136ace184e99c4f9dd0a0a 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 2.4E-37 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_01700 ecd11d2acd136ace184e99c4f9dd0a0a 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 2.4E-37 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_01700 ecd11d2acd136ace184e99c4f9dd0a0a 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 2.4E-37 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_01700 ecd11d2acd136ace184e99c4f9dd0a0a 243 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 9 242 2.8E-52 T 13-10-2018 COP00_16800 dc9938e42ca40c0837dbd81fcb4d1e07 72 SUPERFAMILY SSF50249 1 71 2.37E-29 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold COP00_16800 dc9938e42ca40c0837dbd81fcb4d1e07 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 2.5E-29 T 13-10-2018 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 COP00_16800 dc9938e42ca40c0837dbd81fcb4d1e07 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 71 3.9E-40 T 13-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 COP00_16800 dc9938e42ca40c0837dbd81fcb4d1e07 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 28.522 T 13-10-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 COP00_16800 dc9938e42ca40c0837dbd81fcb4d1e07 72 SMART SM00316 4 72 6.5E-7 T 13-10-2018 IPR022967 RNA-binding domain, S1 COP00_16800 dc9938e42ca40c0837dbd81fcb4d1e07 72 Gene3D G3DSA:2.40.50.140 1 72 7.8E-39 T 13-10-2018 COP00_01210 cc97f5307ac637320e0afa1947624cc1 247 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 11 244 1.8E-74 T 13-10-2018 COP00_01210 cc97f5307ac637320e0afa1947624cc1 247 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 5 185 8.5E-6 T 13-10-2018 COP00_01210 cc97f5307ac637320e0afa1947624cc1 247 SUPERFAMILY SSF51735 3 246 9.45E-96 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily COP00_01210 cc97f5307ac637320e0afa1947624cc1 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 8.8E-16 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_01210 cc97f5307ac637320e0afa1947624cc1 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 8.8E-16 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_01210 cc97f5307ac637320e0afa1947624cc1 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 8.8E-16 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_01210 cc97f5307ac637320e0afa1947624cc1 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 208 228 4.2E-51 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_01210 cc97f5307ac637320e0afa1947624cc1 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 4.2E-51 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_01210 cc97f5307ac637320e0afa1947624cc1 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 4.2E-51 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_01210 cc97f5307ac637320e0afa1947624cc1 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 4.2E-51 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_01210 cc97f5307ac637320e0afa1947624cc1 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 4.2E-51 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_01210 cc97f5307ac637320e0afa1947624cc1 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 4.2E-51 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_01210 cc97f5307ac637320e0afa1947624cc1 247 Gene3D G3DSA:3.40.50.720 1 246 3.2E-94 T 13-10-2018 COP00_01210 cc97f5307ac637320e0afa1947624cc1 247 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 COP00_01210 cc97f5307ac637320e0afa1947624cc1 247 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 7 245 2.5E-110 T 13-10-2018 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 COP00_11800 cac7cf880cfd4a84d5b274c471524965 66 ProDom PD027572 XTRA PBSX RELATED YQAO ELEMENT PHAGE PHAGE-LIKE 13 60 5.0E-14 T 13-10-2018 IPR035530 Phage-like element PBSX protein XtrA COP00_11800 cac7cf880cfd4a84d5b274c471524965 66 Pfam PF17356 Phage-like element PBSX protein XtrA 4 65 1.2E-17 T 13-10-2018 IPR035530 Phage-like element PBSX protein XtrA COP00_03070 069a453e82fe97baaedb86003901f90e 72 ProSitePatterns PS00304 Small, acid-soluble spore proteins, alpha/beta type, signature 1. 28 37 - T 13-10-2018 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site GO:0003690|GO:0006265 COP00_03070 069a453e82fe97baaedb86003901f90e 72 Pfam PF00269 Small, acid-soluble spore proteins, alpha/beta type 13 67 9.0E-22 T 13-10-2018 IPR001448 Small acid-soluble spore protein, alpha/beta-type GO:0003690|GO:0006265 COP00_03070 069a453e82fe97baaedb86003901f90e 72 Gene3D G3DSA:1.10.8.910 13 72 1.1E-31 T 13-10-2018 IPR038300 SASP, alpha/beta-type superfamily COP00_03070 069a453e82fe97baaedb86003901f90e 72 ProSitePatterns PS00684 Small, acid-soluble spore proteins, alpha/beta type, signature 2. 46 60 - T 13-10-2018 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site GO:0003690|GO:0006265 COP00_13905 e005a652015547d9d8e0e220b3ef2657 437 Gene3D G3DSA:3.90.1150.10 312 437 2.0E-28 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 COP00_13905 e005a652015547d9d8e0e220b3ef2657 437 Gene3D G3DSA:3.40.640.10 3 310 3.6E-85 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 COP00_13905 e005a652015547d9d8e0e220b3ef2657 437 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 83 432 6.7E-104 T 13-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase COP00_13905 e005a652015547d9d8e0e220b3ef2657 437 PIRSF PIRSF000390 50 437 1.7E-102 T 13-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase COP00_13905 e005a652015547d9d8e0e220b3ef2657 437 SUPERFAMILY SSF53383 83 436 4.17E-86 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase COP00_06490 3887131f3bcddef33653ecbfc63431fc 421 Pfam PF00364 Biotin-requiring enzyme 5 76 1.8E-23 T 13-10-2018 IPR000089 Biotin/lipoyl attachment COP00_06490 3887131f3bcddef33653ecbfc63431fc 421 Gene3D G3DSA:2.40.50.100 1 103 3.1E-27 T 13-10-2018 COP00_06490 3887131f3bcddef33653ecbfc63431fc 421 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 28 57 - T 13-10-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 COP00_06490 3887131f3bcddef33653ecbfc63431fc 421 Gene3D G3DSA:4.10.320.10 104 151 1.2E-17 T 13-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 COP00_06490 3887131f3bcddef33653ecbfc63431fc 421 Pfam PF02817 e3 binding domain 113 146 2.9E-13 T 13-10-2018 IPR004167 Peripheral subunit-binding domain GO:0016746 Reactome: R-HSA-389661 COP00_06490 3887131f3bcddef33653ecbfc63431fc 421 SUPERFAMILY SSF52777 193 414 1.38E-83 T 13-10-2018 COP00_06490 3887131f3bcddef33653ecbfc63431fc 421 SUPERFAMILY SSF51230 3 95 2.22E-26 T 13-10-2018 IPR011053 Single hybrid motif COP00_06490 3887131f3bcddef33653ecbfc63431fc 421 SUPERFAMILY SSF47005 105 150 4.84E-12 T 13-10-2018 IPR036625 E3-binding domain superfamily GO:0016746 Reactome: R-HSA-389661 COP00_06490 3887131f3bcddef33653ecbfc63431fc 421 Gene3D G3DSA:3.30.559.10 175 421 4.3E-99 T 13-10-2018 IPR023213 Chloramphenicol acetyltransferase-like domain superfamily Reactome: R-HSA-389661 COP00_06490 3887131f3bcddef33653ecbfc63431fc 421 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 192 415 1.6E-82 T 13-10-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0016746 Reactome: R-HSA-389661 COP00_04050 34a0be699d7a6e0ac21f5d3ef85fa940 315 PIRSF PIRSF036894 3 315 2.6E-133 T 13-10-2018 IPR014628 Mannose-6-phosphate isomerase, Firmicutes type, short form GO:0004476|GO:0005975 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882 COP00_04050 34a0be699d7a6e0ac21f5d3ef85fa940 315 TIGRFAM TIGR00218 manA: mannose-6-phosphate isomerase, class I 101 313 5.2E-56 T 13-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 COP00_04050 34a0be699d7a6e0ac21f5d3ef85fa940 315 TIGRFAM TIGR00218 manA: mannose-6-phosphate isomerase, class I 6 104 1.6E-36 T 13-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 COP00_04050 34a0be699d7a6e0ac21f5d3ef85fa940 315 SUPERFAMILY SSF51182 4 312 7.21E-106 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily COP00_04050 34a0be699d7a6e0ac21f5d3ef85fa940 315 Gene3D G3DSA:2.60.120.10 228 315 7.3E-28 T 13-10-2018 IPR014710 RmlC-like jelly roll fold COP00_04050 34a0be699d7a6e0ac21f5d3ef85fa940 315 Gene3D G3DSA:2.60.120.10 1 225 3.6E-94 T 13-10-2018 IPR014710 RmlC-like jelly roll fold COP00_04050 34a0be699d7a6e0ac21f5d3ef85fa940 315 Pfam PF01238 Phosphomannose isomerase type I 8 197 1.0E-40 T 13-10-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-4043916|Reactome: R-HSA-446205 COP00_03245 a88b7565cab3f90c667c7f8c1f0c078a 124 Pfam PF01844 HNH endonuclease 70 116 3.2E-12 T 13-10-2018 IPR002711 HNH endonuclease GO:0003676|GO:0004519 COP00_03245 a88b7565cab3f90c667c7f8c1f0c078a 124 SMART SM00507 57 113 8.3E-7 T 13-10-2018 IPR003615 HNH nuclease COP00_11715 a88b7565cab3f90c667c7f8c1f0c078a 124 Pfam PF01844 HNH endonuclease 70 116 3.2E-12 T 13-10-2018 IPR002711 HNH endonuclease GO:0003676|GO:0004519 COP00_11715 a88b7565cab3f90c667c7f8c1f0c078a 124 SMART SM00507 57 113 8.3E-7 T 13-10-2018 IPR003615 HNH nuclease COP00_07395 aac65e5353d81e508538e51143291c23 117 SUPERFAMILY SSF81301 1 113 8.5E-40 T 13-10-2018 COP00_07395 aac65e5353d81e508538e51143291c23 117 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 1 105 25.109 T 13-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS COP00_07395 aac65e5353d81e508538e51143291c23 117 Pfam PF02410 Ribosomal silencing factor during starvation 10 104 1.5E-25 T 13-10-2018 COP00_07395 aac65e5353d81e508538e51143291c23 117 Gene3D G3DSA:3.30.460.10 1 108 6.4E-39 T 13-10-2018 COP00_07395 aac65e5353d81e508538e51143291c23 117 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 7 104 4.9E-36 T 13-10-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS COP00_06220 9150fe3b67f60e96c27fb852171574c4 107 Pfam PF01521 Iron-sulphur cluster biosynthesis 1 104 5.5E-25 T 13-10-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 COP00_06220 9150fe3b67f60e96c27fb852171574c4 107 SUPERFAMILY SSF89360 1 105 2.09E-24 T 13-10-2018 IPR035903 HesB-like domain superfamily Reactome: R-HSA-1362409 COP00_22500 e69d09d5ce512f85b50affe7a0610cc7 204 Pfam PF10737 Spore germination protein GerPC 23 195 1.6E-57 T 13-10-2018 IPR019673 Spore germination protein GerPC COP00_12340 4c1fa1bf66371695803476a521b86138 273 Gene3D G3DSA:2.40.30.200 4 135 2.6E-5 T 13-10-2018 IPR038675 Streptococcus phage 7201 Orf34, N-terminal domain superfamily COP00_12340 4c1fa1bf66371695803476a521b86138 273 Pfam PF05709 Phage tail protein 24 273 2.9E-48 T 13-10-2018 IPR008841 Siphovirus-type tail component COP00_01665 caf1cbfd106445ad5bd072f65ad885e9 248 SUPERFAMILY SSF52096 32 231 1.21E-39 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily COP00_01665 caf1cbfd106445ad5bd072f65ad885e9 248 Pfam PF00574 Clp protease 47 221 8.6E-35 T 13-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA COP00_01665 caf1cbfd106445ad5bd072f65ad885e9 248 Gene3D G3DSA:3.90.226.10 47 224 4.9E-33 T 13-10-2018 COP00_05135 edb366a8135df6d3039cba7953430b89 182 Gene3D G3DSA:3.30.1060.10 1 165 1.4E-67 T 13-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 COP00_05135 edb366a8135df6d3039cba7953430b89 182 Pfam PF01625 Peptide methionine sulfoxide reductase 8 158 5.3E-62 T 13-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 COP00_05135 edb366a8135df6d3039cba7953430b89 182 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 5 164 37.363 T 13-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 COP00_05135 edb366a8135df6d3039cba7953430b89 182 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 6 157 4.4E-66 T 13-10-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 COP00_05135 edb366a8135df6d3039cba7953430b89 182 SUPERFAMILY SSF55068 3 169 2.88E-74 T 13-10-2018 IPR036509 Peptide methionine sulphoxide reductase MsrA superfamily GO:0008113|GO:0055114 Reactome: R-HSA-5676934 COP00_20580 b11930b83bc60a999233185d501f3263 392 SUPERFAMILY SSF103473 13 387 1.96E-56 T 13-10-2018 IPR036259 MFS transporter superfamily COP00_20580 b11930b83bc60a999233185d501f3263 392 PRINTS PR01035 Tetracycline resistance protein signature 139 161 1.7E-12 T 13-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 COP00_20580 b11930b83bc60a999233185d501f3263 392 PRINTS PR01035 Tetracycline resistance protein signature 167 187 1.7E-12 T 13-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 COP00_20580 b11930b83bc60a999233185d501f3263 392 PRINTS PR01035 Tetracycline resistance protein signature 25 41 1.7E-12 T 13-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 COP00_20580 b11930b83bc60a999233185d501f3263 392 Pfam PF07690 Major Facilitator Superfamily 240 378 3.6E-8 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 COP00_20580 b11930b83bc60a999233185d501f3263 392 Pfam PF07690 Major Facilitator Superfamily 20 235 2.4E-28 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 COP00_20580 b11930b83bc60a999233185d501f3263 392 Gene3D G3DSA:1.20.1250.20 10 380 9.6E-56 T 13-10-2018 COP00_17010 a7338f69523ceb12fea005ac918746c5 210 Pfam PF13490 Putative zinc-finger 6 37 4.1E-7 T 13-10-2018 IPR027383 Putative zinc-finger COP00_17010 a7338f69523ceb12fea005ac918746c5 210 Gene3D G3DSA:1.10.10.1320 7 93 1.2E-6 T 13-10-2018 COP00_15395 9dbfce8984487e1f731251a23e5e5406 254 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 COP00_15395 9dbfce8984487e1f731251a23e5e5406 254 Pfam PF00005 ABC transporter 20 168 2.9E-35 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 COP00_15395 9dbfce8984487e1f731251a23e5e5406 254 SMART SM00382 29 217 2.9E-13 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_15395 9dbfce8984487e1f731251a23e5e5406 254 SUPERFAMILY SSF52540 1 225 3.47E-67 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_15395 9dbfce8984487e1f731251a23e5e5406 254 Gene3D G3DSA:3.40.50.300 1 250 3.8E-67 T 13-10-2018 COP00_20910 09456b6a7e8ed60305e39c70166ecdbf 287 Gene3D G3DSA:1.10.1670.40 100 284 4.5E-49 T 13-10-2018 COP00_20910 09456b6a7e8ed60305e39c70166ecdbf 287 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 124 271 1.6E-19 T 13-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 COP00_20910 09456b6a7e8ed60305e39c70166ecdbf 287 Gene3D G3DSA:1.10.340.30 115 234 4.5E-49 T 13-10-2018 COP00_20910 09456b6a7e8ed60305e39c70166ecdbf 287 SMART SM00478 127 286 1.3E-23 T 13-10-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 COP00_20910 09456b6a7e8ed60305e39c70166ecdbf 287 SUPERFAMILY SSF48150 108 285 3.49E-38 T 13-10-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 COP00_18240 49e5defc461fa28798fe4373622ab0a0 254 Pfam PF04740 LXG domain of WXG superfamily 2 201 6.6E-41 T 13-10-2018 IPR006829 LXG domain COP00_04475 8f90548d69a8638aa9f2f4d8f3e47607 136 Pfam PF17329 Family of unknown function (DUF5367) 51 129 4.5E-8 T 13-10-2018 IPR020509 Uncharacterised protein family YnzE COP00_04475 8f90548d69a8638aa9f2f4d8f3e47607 136 ProDom PD068105 YNZE MEMBRANE TRANSMEMBRANE 31 131 4.0E-34 T 13-10-2018 IPR020509 Uncharacterised protein family YnzE COP00_13960 3e3bb17fb0e234329cd49b0a7d765e67 321 PIRSF PIRSF004532 1 320 2.9E-150 T 13-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 COP00_13960 3e3bb17fb0e234329cd49b0a7d765e67 321 Gene3D G3DSA:3.30.540.10 7 309 3.1E-134 T 13-10-2018 COP00_13960 3e3bb17fb0e234329cd49b0a7d765e67 321 SUPERFAMILY SSF56655 1 312 9.16E-111 T 13-10-2018 COP00_13960 3e3bb17fb0e234329cd49b0a7d765e67 321 TIGRFAM TIGR00330 glpX: fructose-1,6-bisphosphatase, class II 1 320 5.5E-161 T 13-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 COP00_13960 3e3bb17fb0e234329cd49b0a7d765e67 321 Gene3D G3DSA:3.40.190.90 122 283 3.1E-134 T 13-10-2018 COP00_13960 3e3bb17fb0e234329cd49b0a7d765e67 321 Pfam PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded 3 309 6.1E-143 T 13-10-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 COP00_14300 b4af4a1909944b70d9c4e2ed92305a00 601 Pfam PF00005 ABC transporter 375 525 7.9E-23 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 COP00_14300 b4af4a1909944b70d9c4e2ed92305a00 601 Gene3D G3DSA:1.20.1560.10 18 341 5.2E-9 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 COP00_14300 b4af4a1909944b70d9c4e2ed92305a00 601 Gene3D G3DSA:3.40.50.300 349 600 7.8E-69 T 13-10-2018 COP00_14300 b4af4a1909944b70d9c4e2ed92305a00 601 SUPERFAMILY SSF90123 23 319 1.44E-17 T 13-10-2018 IPR036640 ABC transporter type 1, transmembrane domain superfamily GO:0005524|GO:0016021 COP00_14300 b4af4a1909944b70d9c4e2ed92305a00 601 SMART SM00382 380 572 2.2E-17 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_14300 b4af4a1909944b70d9c4e2ed92305a00 601 SUPERFAMILY SSF52540 353 596 9.16E-64 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_14300 b4af4a1909944b70d9c4e2ed92305a00 601 ProSitePatterns PS00211 ABC transporters family signature. 496 510 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 COP00_13235 d8c5c1b69bf0797ccd226b0194768126 526 SUPERFAMILY SSF52540 34 235 3.63E-44 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_13235 d8c5c1b69bf0797ccd226b0194768126 526 Gene3D G3DSA:3.40.50.300 2 287 4.0E-45 T 13-10-2018 COP00_13235 d8c5c1b69bf0797ccd226b0194768126 526 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 COP00_13235 d8c5c1b69bf0797ccd226b0194768126 526 Pfam PF00005 ABC transporter 41 171 5.8E-18 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 COP00_13235 d8c5c1b69bf0797ccd226b0194768126 526 SMART SM00382 49 237 2.2E-8 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_05715 b8afc327db982980a77dea7b157e6521 240 ProDom PD119161 YPHF BH1644 PROTEINS PRECURSOR ORF1 RBL05088 SIGNAL SIMILAR 18 237 4.0E-98 T 13-10-2018 COP00_10975 9d0a3d140a8c1e8c7976f4de5951b586 122 Pfam PF02627 Carboxymuconolactone decarboxylase family 29 108 1.9E-17 T 13-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 COP00_10975 9d0a3d140a8c1e8c7976f4de5951b586 122 SUPERFAMILY SSF69118 5 118 7.72E-27 T 13-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 COP00_10975 9d0a3d140a8c1e8c7976f4de5951b586 122 Gene3D G3DSA:1.20.1290.10 2 119 1.9E-29 T 13-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 COP00_06825 be2053e13b2a59dd51d3a39a9a279dfa 126 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 5 115 2.9E-41 T 13-10-2018 IPR006504 Transcriptional regulator Spx/MgsR COP00_06825 be2053e13b2a59dd51d3a39a9a279dfa 126 SUPERFAMILY SSF52833 4 118 1.12E-34 T 13-10-2018 IPR036249 Thioredoxin-like superfamily COP00_06825 be2053e13b2a59dd51d3a39a9a279dfa 126 Gene3D G3DSA:3.40.30.10 4 121 1.8E-37 T 13-10-2018 COP00_06825 be2053e13b2a59dd51d3a39a9a279dfa 126 Pfam PF03960 ArsC family 7 114 8.4E-20 T 13-10-2018 IPR006660 Arsenate reductase-like COP00_19925 4fcac199364c64eda43645c4b3bf3d12 281 Pfam PF08795 Putative papain-like cysteine peptidase (DUF1796) 12 169 1.5E-33 T 13-10-2018 IPR014903 Protein of unknown function DUF1796 COP00_06190 50f892ef24985def3d59988f09b4c49c 468 SUPERFAMILY SSF51126 49 420 1.98E-64 T 13-10-2018 IPR011050 Pectin lyase fold/virulence factor COP00_06190 50f892ef24985def3d59988f09b4c49c 468 SMART SM00710 156 185 0.94 T 13-10-2018 IPR006626 Parallel beta-helix repeat COP00_06190 50f892ef24985def3d59988f09b4c49c 468 SMART SM00710 189 214 8600.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat COP00_06190 50f892ef24985def3d59988f09b4c49c 468 SMART SM00710 284 305 120.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat COP00_06190 50f892ef24985def3d59988f09b4c49c 468 SMART SM00710 397 420 3200.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat COP00_06190 50f892ef24985def3d59988f09b4c49c 468 SMART SM00710 125 154 3600.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat COP00_06190 50f892ef24985def3d59988f09b4c49c 468 SMART SM00710 312 334 1.1 T 13-10-2018 IPR006626 Parallel beta-helix repeat COP00_06190 50f892ef24985def3d59988f09b4c49c 468 SMART SM00710 249 283 2.1 T 13-10-2018 IPR006626 Parallel beta-helix repeat COP00_06190 50f892ef24985def3d59988f09b4c49c 468 SMART SM00710 216 238 320.0 T 13-10-2018 IPR006626 Parallel beta-helix repeat COP00_06190 50f892ef24985def3d59988f09b4c49c 468 Pfam PF13229 Right handed beta helix region 148 336 2.0E-13 T 13-10-2018 IPR039448 Right handed beta helix domain COP00_06190 50f892ef24985def3d59988f09b4c49c 468 SMART SM00722 72 237 2.6E-5 T 13-10-2018 IPR006633 Carbohydrate-binding/sugar hydrolysis domain COP00_06190 50f892ef24985def3d59988f09b4c49c 468 Gene3D G3DSA:2.160.20.10 36 450 1.2E-64 T 13-10-2018 IPR012334 Pectin lyase fold COP00_03640 e03cabe6fd6cd2fe72dbb1cb54880743 49 Hamap MF_00666 Small, acid-soluble spore protein P [sspP]. 1 49 16.959 T 13-10-2018 IPR012614 Small acid-soluble spore protein, SspP GO:0030435 COP00_03640 e03cabe6fd6cd2fe72dbb1cb54880743 49 Pfam PF08179 Small acid-soluble spore protein P family 2 44 6.1E-22 T 13-10-2018 IPR012614 Small acid-soluble spore protein, SspP GO:0030435 COP00_20670 84d47a006eb8d7baf5e20fe8b12a74ac 94 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 37 52 3.9E-15 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 COP00_20670 84d47a006eb8d7baf5e20fe8b12a74ac 94 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 5 20 3.9E-15 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 COP00_20670 84d47a006eb8d7baf5e20fe8b12a74ac 94 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 52 67 3.9E-15 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 COP00_20670 84d47a006eb8d7baf5e20fe8b12a74ac 94 SUPERFAMILY SSF46785 3 82 2.01E-27 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_20670 84d47a006eb8d7baf5e20fe8b12a74ac 94 SMART SM00418 3 81 2.5E-28 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 COP00_20670 84d47a006eb8d7baf5e20fe8b12a74ac 94 Gene3D G3DSA:1.10.10.10 1 90 6.7E-29 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_20670 84d47a006eb8d7baf5e20fe8b12a74ac 94 Pfam PF01022 Bacterial regulatory protein, arsR family 10 55 3.4E-17 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 COP00_02020 186c15a05a00f9693388f26fa35bd442 338 SUPERFAMILY SSF56601 6 335 3.86E-75 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like COP00_02020 186c15a05a00f9693388f26fa35bd442 338 Gene3D G3DSA:3.40.710.10 7 333 5.5E-83 T 13-10-2018 COP00_02020 186c15a05a00f9693388f26fa35bd442 338 Pfam PF00144 Beta-lactamase 23 326 1.8E-54 T 13-10-2018 IPR001466 Beta-lactamase-related COP00_13615 1e548b3c07a80a4a2168de83eb0190b9 432 Gene3D G3DSA:3.30.465.10 349 430 2.0E-16 T 13-10-2018 IPR016169 FAD-binding, type PCMH, subdomain 2 COP00_13615 1e548b3c07a80a4a2168de83eb0190b9 432 SMART SM00116 291 339 1.2 T 13-10-2018 IPR000644 CBS domain COP00_13615 1e548b3c07a80a4a2168de83eb0190b9 432 SMART SM00116 225 274 6.3 T 13-10-2018 IPR000644 CBS domain COP00_13615 1e548b3c07a80a4a2168de83eb0190b9 432 Pfam PF00571 CBS domain 218 267 0.0016 T 13-10-2018 IPR000644 CBS domain COP00_13615 1e548b3c07a80a4a2168de83eb0190b9 432 Pfam PF00571 CBS domain 290 339 3.7E-5 T 13-10-2018 IPR000644 CBS domain COP00_13615 1e548b3c07a80a4a2168de83eb0190b9 432 SUPERFAMILY SSF54631 204 342 7.33E-30 T 13-10-2018 COP00_13615 1e548b3c07a80a4a2168de83eb0190b9 432 Pfam PF03471 Transporter associated domain 356 431 8.4E-15 T 13-10-2018 IPR005170 Transporter-associated domain COP00_13615 1e548b3c07a80a4a2168de83eb0190b9 432 Gene3D G3DSA:3.10.580.10 195 348 3.5E-49 T 13-10-2018 COP00_13615 1e548b3c07a80a4a2168de83eb0190b9 432 SMART SM01091 355 432 1.6E-20 T 13-10-2018 IPR005170 Transporter-associated domain COP00_13615 1e548b3c07a80a4a2168de83eb0190b9 432 SUPERFAMILY SSF56176 353 430 6.82E-16 T 13-10-2018 IPR036318 FAD-binding, type PCMH-like superfamily GO:0050660 COP00_13615 1e548b3c07a80a4a2168de83eb0190b9 432 Pfam PF01595 Domain of unknown function DUF21 9 201 1.0E-47 T 13-10-2018 IPR002550 CNNM, transmembrane domain COP00_05980 5a7cc7adc8a23a0c4e7ad2337b149e5f 215 Gene3D G3DSA:2.40.30.20 1 88 3.6E-31 T 13-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 COP00_05980 5a7cc7adc8a23a0c4e7ad2337b149e5f 215 Gene3D G3DSA:2.40.30.20 101 205 7.3E-34 T 13-10-2018 IPR023366 ATP synthase subunit alpha, N-terminal domain-like superfamily KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7980 COP00_05980 5a7cc7adc8a23a0c4e7ad2337b149e5f 215 Pfam PF00677 Lumazine binding domain 99 183 9.9E-23 T 13-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 COP00_05980 5a7cc7adc8a23a0c4e7ad2337b149e5f 215 Pfam PF00677 Lumazine binding domain 3 86 3.7E-24 T 13-10-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 COP00_05980 5a7cc7adc8a23a0c4e7ad2337b149e5f 215 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 203 1.3E-83 T 13-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 COP00_05980 5a7cc7adc8a23a0c4e7ad2337b149e5f 215 SUPERFAMILY SSF63380 1 89 2.13E-27 T 13-10-2018 IPR017938 Riboflavin synthase-like beta-barrel COP00_05980 5a7cc7adc8a23a0c4e7ad2337b149e5f 215 SUPERFAMILY SSF63380 92 196 3.4E-33 T 13-10-2018 IPR017938 Riboflavin synthase-like beta-barrel COP00_05980 5a7cc7adc8a23a0c4e7ad2337b149e5f 215 PIRSF PIRSF000498 1 210 2.0E-79 T 13-10-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 COP00_16810 0568b868db5a0cb64f1e5cc4015f653f 121 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 13-10-2018 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 COP00_16810 0568b868db5a0cb64f1e5cc4015f653f 121 SUPERFAMILY SSF46946 2 114 3.14E-46 T 13-10-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 COP00_16810 0568b868db5a0cb64f1e5cc4015f653f 121 PIRSF PIRSF002134 1 121 3.5E-43 T 13-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 COP00_16810 0568b868db5a0cb64f1e5cc4015f653f 121 Gene3D G3DSA:1.10.8.50 1 71 4.1E-30 T 13-10-2018 COP00_16810 0568b868db5a0cb64f1e5cc4015f653f 121 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 2.1E-53 T 13-10-2018 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 COP00_16810 0568b868db5a0cb64f1e5cc4015f653f 121 Pfam PF00416 Ribosomal protein S13/S18 3 108 4.0E-35 T 13-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 COP00_16810 0568b868db5a0cb64f1e5cc4015f653f 121 Gene3D G3DSA:4.10.910.10 72 121 6.2E-26 T 13-10-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 COP00_16810 0568b868db5a0cb64f1e5cc4015f653f 121 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 118 28.111 T 13-10-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 COP00_21630 cc269db0fd89e8b902e779d00587cc0a 123 ProDom PD081567 YHCU 4 111 3.0E-48 T 13-10-2018 IPR020355 Uncharacterised protein family YhcU COP00_21630 cc269db0fd89e8b902e779d00587cc0a 123 Pfam PF17326 Family of unknown function (DUF5365) 4 112 8.0E-40 T 13-10-2018 IPR020355 Uncharacterised protein family YhcU COP00_10405 09c77971a988609caa1c55327aa0454b 359 Pfam PF02608 ABC transporter substrate-binding protein PnrA-like 40 349 1.9E-97 T 13-10-2018 IPR003760 ABC transporter substrate-binding protein PnrA-like GO:0005886 COP00_10405 09c77971a988609caa1c55327aa0454b 359 SUPERFAMILY SSF53822 53 302 4.37E-12 T 13-10-2018 IPR028082 Periplasmic binding protein-like I COP00_10405 09c77971a988609caa1c55327aa0454b 359 Gene3D G3DSA:3.40.50.2300 42 312 5.0E-111 T 13-10-2018 COP00_10405 09c77971a988609caa1c55327aa0454b 359 Gene3D G3DSA:3.40.50.2300 146 345 5.0E-111 T 13-10-2018 COP00_04800 29649fb072ec01837c677ea15e0b7530 390 Gene3D G3DSA:2.60.120.10 10 376 5.7E-170 T 13-10-2018 IPR014710 RmlC-like jelly roll fold COP00_04800 29649fb072ec01837c677ea15e0b7530 390 TIGRFAM TIGR03404 bicupin_oxalic: bicupin, oxalate decarboxylase family 16 382 3.2E-180 T 13-10-2018 IPR017774 Bicupin, oxalate decarboxylase/oxidase GO:0033609 KEGG: 00630+4.1.1.2|MetaCyc: PWY-6698 COP00_04800 29649fb072ec01837c677ea15e0b7530 390 Gene3D G3DSA:2.60.120.10 59 232 5.7E-170 T 13-10-2018 IPR014710 RmlC-like jelly roll fold COP00_04800 29649fb072ec01837c677ea15e0b7530 390 SUPERFAMILY SSF51182 19 381 1.86E-110 T 13-10-2018 IPR011051 RmlC-like cupin domain superfamily COP00_04800 29649fb072ec01837c677ea15e0b7530 390 Pfam PF00190 Cupin 232 369 2.7E-24 T 13-10-2018 IPR006045 Cupin 1 GO:0045735 COP00_04800 29649fb072ec01837c677ea15e0b7530 390 Pfam PF00190 Cupin 64 191 2.1E-20 T 13-10-2018 IPR006045 Cupin 1 GO:0045735 COP00_04800 29649fb072ec01837c677ea15e0b7530 390 SMART SM00835 231 372 6.5E-35 T 13-10-2018 IPR006045 Cupin 1 GO:0045735 COP00_04800 29649fb072ec01837c677ea15e0b7530 390 SMART SM00835 53 195 9.0E-14 T 13-10-2018 IPR006045 Cupin 1 GO:0045735 COP00_07885 df93e6788e3b5a96751973d0a147a866 396 SUPERFAMILY SSF56059 86 306 3.7E-37 T 13-10-2018 COP00_07885 df93e6788e3b5a96751973d0a147a866 396 Pfam PF13535 ATP-grasp domain 138 280 1.4E-21 T 13-10-2018 COP00_07885 df93e6788e3b5a96751973d0a147a866 396 Gene3D G3DSA:3.30.470.20 94 396 3.2E-78 T 13-10-2018 COP00_19980 74188f78d766b298c18fa2a255dae688 275 SUPERFAMILY SSF56024 110 183 1.44E-5 T 13-10-2018 COP00_19980 74188f78d766b298c18fa2a255dae688 275 Gene3D G3DSA:1.10.10.10 1 102 8.0E-23 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_19980 74188f78d766b298c18fa2a255dae688 275 Pfam PF01978 Sugar-specific transcriptional regulator TrmB 9 75 2.7E-20 T 13-10-2018 IPR002831 Transcription regulator TrmB, N-terminal COP00_19980 74188f78d766b298c18fa2a255dae688 275 Pfam PF11495 Archaeal transcriptional regulator TrmB 110 174 1.6E-7 T 13-10-2018 IPR021586 Transcription regulator TrmB, C-terminal COP00_19980 74188f78d766b298c18fa2a255dae688 275 SUPERFAMILY SSF46785 3 92 6.2E-5 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_19200 2e92b1ad9b5610fa453f65a96defb6dd 369 SUPERFAMILY SSF48452 101 303 2.09E-14 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 COP00_19200 2e92b1ad9b5610fa453f65a96defb6dd 369 Pfam PF07719 Tetratricopeptide repeat 221 252 5.3E-5 T 13-10-2018 IPR013105 Tetratricopeptide repeat 2 COP00_19200 2e92b1ad9b5610fa453f65a96defb6dd 369 SMART SM00028 260 293 17.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 COP00_19200 2e92b1ad9b5610fa453f65a96defb6dd 369 SMART SM00028 140 173 380.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 COP00_19200 2e92b1ad9b5610fa453f65a96defb6dd 369 SMART SM00028 221 254 1.3E-4 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 COP00_19200 2e92b1ad9b5610fa453f65a96defb6dd 369 SMART SM00028 332 365 110.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 COP00_19200 2e92b1ad9b5610fa453f65a96defb6dd 369 SMART SM00028 100 133 50.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 COP00_19200 2e92b1ad9b5610fa453f65a96defb6dd 369 Gene3D G3DSA:1.25.40.10 153 369 7.2E-56 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 COP00_19200 2e92b1ad9b5610fa453f65a96defb6dd 369 Gene3D G3DSA:1.25.40.10 1 152 6.1E-53 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 COP00_23605 83d0b0feafa8468c1289d90845165cd0 117 Pfam PF01381 Helix-turn-helix 12 58 1.6E-17 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 COP00_23605 83d0b0feafa8468c1289d90845165cd0 117 SUPERFAMILY SSF47413 2 65 6.31E-17 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 COP00_23605 83d0b0feafa8468c1289d90845165cd0 117 Gene3D G3DSA:1.10.260.40 1 110 3.9E-23 T 13-10-2018 COP00_23605 83d0b0feafa8468c1289d90845165cd0 117 SMART SM00530 5 58 5.0E-18 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 COP00_22460 d7f611ad03034a7b4bb1d22b8d9b2332 218 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 25 214 2.4E-23 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 COP00_22460 d7f611ad03034a7b4bb1d22b8d9b2332 218 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 11 215 4.2E-69 T 13-10-2018 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 COP00_22460 d7f611ad03034a7b4bb1d22b8d9b2332 218 SUPERFAMILY SSF161098 4 216 2.88E-50 T 13-10-2018 IPR035906 MetI-like superfamily COP00_22460 d7f611ad03034a7b4bb1d22b8d9b2332 218 Gene3D G3DSA:1.10.3720.10 2 218 3.4E-55 T 13-10-2018 IPR035906 MetI-like superfamily COP00_06120 f225f067472c759cd8202d0eb21d5772 218 TIGRFAM TIGR02831 spo_II_M: stage II sporulation protein M 10 207 5.8E-78 T 13-10-2018 IPR014196 Stage II sporulation protein M COP00_06120 f225f067472c759cd8202d0eb21d5772 218 Pfam PF01944 Stage II sporulation protein M 25 203 3.3E-28 T 13-10-2018 IPR002798 Stage II sporulation protein M-like COP00_06120 f225f067472c759cd8202d0eb21d5772 218 PIRSF PIRSF038973 1 214 8.5E-71 T 13-10-2018 IPR014196 Stage II sporulation protein M COP00_16065 74f8313663f3b5f30d0396e03bb8e34f 207 SUPERFAMILY SSF52540 1 205 9.19E-49 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_16065 74f8313663f3b5f30d0396e03bb8e34f 207 PIRSF PIRSF000705 1 207 3.4E-57 T 13-10-2018 IPR002624 Deoxynucleoside kinase GO:0005524|GO:0006139|GO:0019206 COP00_16065 74f8313663f3b5f30d0396e03bb8e34f 207 Pfam PF01712 Deoxynucleoside kinase 7 206 1.3E-52 T 13-10-2018 IPR031314 Deoxynucleoside kinase domain COP00_16065 74f8313663f3b5f30d0396e03bb8e34f 207 Gene3D G3DSA:3.40.50.300 5 207 1.6E-49 T 13-10-2018 COP00_13525 79d284ec18e942e65c03ea80753d5668 113 SUPERFAMILY SSF50249 1 108 6.21E-42 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold COP00_13525 79d284ec18e942e65c03ea80753d5668 113 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 1 105 9.1E-35 T 13-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 COP00_13525 79d284ec18e942e65c03ea80753d5668 113 Gene3D G3DSA:2.40.50.140 1 112 7.4E-43 T 13-10-2018 COP00_13525 79d284ec18e942e65c03ea80753d5668 113 PIRSF PIRSF002070 1 111 3.5E-32 T 13-10-2018 COP00_13525 79d284ec18e942e65c03ea80753d5668 113 Hamap MF_00984 Single-stranded DNA-binding protein. 2 107 32.587 T 13-10-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 COP00_13525 79d284ec18e942e65c03ea80753d5668 113 Pfam PF00436 Single-strand binding protein family 2 103 6.9E-33 T 13-10-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 COP00_11310 e3a1493df2f1dddae600218d99417068 47 Pfam PF09575 Small spore protein J (Spore_SspJ) 2 47 2.4E-25 T 13-10-2018 IPR014220 Small acid-soluble spore protein, SspJ COP00_11310 e3a1493df2f1dddae600218d99417068 47 TIGRFAM TIGR02863 spore_sspJ: small, acid-soluble spore protein, SspJ family 2 47 8.7E-28 T 13-10-2018 IPR014220 Small acid-soluble spore protein, SspJ COP00_00260 0f6e44447d8d2bde071ff56a2a7a2743 439 SUPERFAMILY SSF103473 29 436 1.96E-44 T 13-10-2018 IPR036259 MFS transporter superfamily COP00_00260 0f6e44447d8d2bde071ff56a2a7a2743 439 Gene3D G3DSA:1.20.1250.20 245 436 3.0E-22 T 13-10-2018 COP00_00260 0f6e44447d8d2bde071ff56a2a7a2743 439 Pfam PF11700 Vacuole effluxer Atg22 like 173 433 5.7E-36 T 13-10-2018 IPR024671 Autophagy-related protein 22-like COP00_00260 0f6e44447d8d2bde071ff56a2a7a2743 439 ProSitePatterns PS00217 Sugar transport proteins signature 2. 352 377 - T 13-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 COP00_00260 0f6e44447d8d2bde071ff56a2a7a2743 439 Gene3D G3DSA:1.20.1250.20 27 231 1.0E-15 T 13-10-2018 COP00_18210 a10928c927510c92476a3120af5ff6bd 273 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 COP00_18210 a10928c927510c92476a3120af5ff6bd 273 SUPERFAMILY SSF52540 5 230 8.7E-60 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_18210 a10928c927510c92476a3120af5ff6bd 273 Pfam PF00005 ABC transporter 21 168 3.1E-32 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 COP00_18210 a10928c927510c92476a3120af5ff6bd 273 SMART SM00382 29 218 1.0E-13 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_18210 a10928c927510c92476a3120af5ff6bd 273 Gene3D G3DSA:3.40.50.300 2 256 1.9E-64 T 13-10-2018 COP00_16730 581cf9285ac81754eca1c6ea57e0f3d8 122 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 13-10-2018 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 COP00_16730 581cf9285ac81754eca1c6ea57e0f3d8 122 SMART SM01374 1 122 4.0E-84 T 13-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 COP00_16730 581cf9285ac81754eca1c6ea57e0f3d8 122 Pfam PF00238 Ribosomal protein L14p/L23e 1 122 7.6E-54 T 13-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 COP00_16730 581cf9285ac81754eca1c6ea57e0f3d8 122 Gene3D G3DSA:2.40.150.20 1 122 1.1E-52 T 13-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 COP00_16730 581cf9285ac81754eca1c6ea57e0f3d8 122 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 122 25.779 T 13-10-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 COP00_16730 581cf9285ac81754eca1c6ea57e0f3d8 122 SUPERFAMILY SSF50193 1 122 9.16E-50 T 13-10-2018 IPR036853 Ribosomal protein L14 superfamily GO:0003735|GO:0005840|GO:0006412 COP00_16730 581cf9285ac81754eca1c6ea57e0f3d8 122 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 122 2.9E-58 T 13-10-2018 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 COP00_08985 50440547c2622851a2cae0723d142b2a 519 Pfam PF09423 PhoD-like phosphatase 156 487 2.9E-102 T 13-10-2018 IPR018946 Alkaline phosphatase D-related COP00_08985 50440547c2622851a2cae0723d142b2a 519 Pfam PF16655 PhoD-like phosphatase, N-terminal domain 45 143 1.9E-31 T 13-10-2018 IPR032093 Phospholipase D, N-terminal COP00_08985 50440547c2622851a2cae0723d142b2a 519 Gene3D G3DSA:2.60.40.380 35 146 7.9E-39 T 13-10-2018 IPR008963 Purple acid phosphatase-like, N-terminal GO:0003993|GO:0046872 COP00_08985 50440547c2622851a2cae0723d142b2a 519 Gene3D G3DSA:3.60.21.70 147 519 9.8E-131 T 13-10-2018 IPR038607 PhoD-like superfamily COP00_08985 50440547c2622851a2cae0723d142b2a 519 SUPERFAMILY SSF56300 153 489 3.48E-28 T 13-10-2018 COP00_10345 a1446316f8ea5c28bddc2e9743c6990f 273 PRINTS PR00111 Alpha/beta hydrolase fold signature 111 124 2.6E-15 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 COP00_10345 a1446316f8ea5c28bddc2e9743c6990f 273 PRINTS PR00111 Alpha/beta hydrolase fold signature 217 231 2.6E-15 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 COP00_10345 a1446316f8ea5c28bddc2e9743c6990f 273 PRINTS PR00111 Alpha/beta hydrolase fold signature 52 67 2.6E-15 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 COP00_10345 a1446316f8ea5c28bddc2e9743c6990f 273 PRINTS PR00111 Alpha/beta hydrolase fold signature 97 110 2.6E-15 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 COP00_10345 a1446316f8ea5c28bddc2e9743c6990f 273 SUPERFAMILY SSF53474 8 271 6.11E-62 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold COP00_10345 a1446316f8ea5c28bddc2e9743c6990f 273 Gene3D G3DSA:3.40.50.1820 4 273 7.9E-64 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold COP00_10345 a1446316f8ea5c28bddc2e9743c6990f 273 Pfam PF00561 alpha/beta hydrolase fold 28 126 1.3E-18 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 COP00_10345 a1446316f8ea5c28bddc2e9743c6990f 273 Pfam PF00561 alpha/beta hydrolase fold 170 260 8.6E-7 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 COP00_10345 a1446316f8ea5c28bddc2e9743c6990f 273 PRINTS PR00412 Epoxide hydrolase signature 248 270 1.5E-6 T 13-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 COP00_10345 a1446316f8ea5c28bddc2e9743c6990f 273 PRINTS PR00412 Epoxide hydrolase signature 33 51 1.5E-6 T 13-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 COP00_10345 a1446316f8ea5c28bddc2e9743c6990f 273 PRINTS PR00412 Epoxide hydrolase signature 215 231 1.5E-6 T 13-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 COP00_10345 a1446316f8ea5c28bddc2e9743c6990f 273 PRINTS PR00412 Epoxide hydrolase signature 97 110 1.5E-6 T 13-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 COP00_17065 23075c13921e01aa60d779c3a2e0c9f8 202 Pfam PF13346 ABC-2 family transporter protein 3 197 3.2E-31 T 13-10-2018 IPR025699 ABC-2 membrane transporter-like COP00_16740 8f8e7ebe9d56c12b29821cc8f3f1547f 179 Gene3D G3DSA:3.30.1440.10 1 179 1.2E-85 T 13-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 COP00_16740 8f8e7ebe9d56c12b29821cc8f3f1547f 179 Pfam PF00281 Ribosomal protein L5 24 80 2.9E-28 T 13-10-2018 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 COP00_16740 8f8e7ebe9d56c12b29821cc8f3f1547f 179 Pfam PF00673 ribosomal L5P family C-terminus 84 177 5.3E-43 T 13-10-2018 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 COP00_16740 8f8e7ebe9d56c12b29821cc8f3f1547f 179 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 179 46.215 T 13-10-2018 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 COP00_16740 8f8e7ebe9d56c12b29821cc8f3f1547f 179 ProSitePatterns PS00358 Ribosomal protein L5 signature. 57 73 - T 13-10-2018 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 COP00_16740 8f8e7ebe9d56c12b29821cc8f3f1547f 179 PIRSF PIRSF002161 1 179 4.3E-71 T 13-10-2018 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 COP00_16740 8f8e7ebe9d56c12b29821cc8f3f1547f 179 SUPERFAMILY SSF55282 3 178 1.46E-80 T 13-10-2018 IPR022803 Ribosomal protein L5 domain superfamily Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 COP00_10505 ca1250c286aa7fc641e499b79af997aa 293 Gene3D G3DSA:1.10.600.10 2 290 1.2E-34 T 13-10-2018 IPR008949 Isoprenoid synthase domain superfamily COP00_10505 ca1250c286aa7fc641e499b79af997aa 293 Pfam PF00348 Polyprenyl synthetase 36 230 1.6E-16 T 13-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 COP00_10505 ca1250c286aa7fc641e499b79af997aa 293 SUPERFAMILY SSF48576 13 285 1.3E-34 T 13-10-2018 IPR008949 Isoprenoid synthase domain superfamily COP00_21395 438529e744f5240f4a19ddb9e9e7c8f8 278 Gene3D G3DSA:1.10.3720.10 73 265 1.1E-22 T 13-10-2018 IPR035906 MetI-like superfamily COP00_21395 438529e744f5240f4a19ddb9e9e7c8f8 278 SUPERFAMILY SSF161098 73 254 1.05E-30 T 13-10-2018 IPR035906 MetI-like superfamily COP00_21395 438529e744f5240f4a19ddb9e9e7c8f8 278 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 97 265 1.2E-26 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 COP00_14610 37bcb70dbbf0b6363beaa738d3c79fc4 282 Pfam PF04321 RmlD substrate binding domain 2 227 5.8E-23 T 13-10-2018 IPR029903 RmlD-like substrate binding domain Reactome: R-HSA-156581|Reactome: R-HSA-5689880 COP00_14610 37bcb70dbbf0b6363beaa738d3c79fc4 282 Gene3D G3DSA:3.90.25.10 162 241 1.5E-42 T 13-10-2018 COP00_14610 37bcb70dbbf0b6363beaa738d3c79fc4 282 SUPERFAMILY SSF51735 2 267 3.39E-45 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily COP00_14610 37bcb70dbbf0b6363beaa738d3c79fc4 282 Gene3D G3DSA:3.40.50.720 4 214 1.5E-42 T 13-10-2018 COP00_10950 64e23004f37855432842650cd1a00b0e 148 Pfam PF01592 NifU-like N terminal domain 11 128 2.0E-39 T 13-10-2018 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 COP00_10950 64e23004f37855432842650cd1a00b0e 148 TIGRFAM TIGR01994 SUF_scaf_2: SUF system FeS assembly protein, NifU family 7 140 1.2E-58 T 13-10-2018 COP00_10950 64e23004f37855432842650cd1a00b0e 148 Gene3D G3DSA:3.90.1010.10 1 147 2.7E-64 T 13-10-2018 COP00_10950 64e23004f37855432842650cd1a00b0e 148 SUPERFAMILY SSF82649 1 142 3.92E-52 T 13-10-2018 COP00_03295 d28e0bd71695c4c4df3b46155f503202 132 Pfam PF04883 Bacteriophage HK97-gp10, putative tail-component 11 97 8.6E-11 T 13-10-2018 IPR010064 Bacteriophage HK97-gp10, putative tail-component COP00_03295 d28e0bd71695c4c4df3b46155f503202 132 TIGRFAM TIGR01725 phge_HK97_gp10: phage protein, HK97 gp10 family 8 130 8.6E-17 T 13-10-2018 IPR010064 Bacteriophage HK97-gp10, putative tail-component COP00_01815 615248a9f22618491a2cfe5964a7319c 220 SMART SM00860 15 125 4.0E-8 T 13-10-2018 IPR018958 Knr4/Smi1-like domain COP00_01815 615248a9f22618491a2cfe5964a7319c 220 Gene3D G3DSA:3.40.1580.10 5 139 2.5E-27 T 13-10-2018 IPR037883 Knr4/Smi1-like domain superfamily COP00_01815 615248a9f22618491a2cfe5964a7319c 220 Pfam PF14568 SMI1-KNR4 cell-wall 18 123 1.0E-13 T 13-10-2018 COP00_01815 615248a9f22618491a2cfe5964a7319c 220 SUPERFAMILY SSF160631 8 125 2.88E-23 T 13-10-2018 COP00_24165 51d5a452fa85a8bcbe5323499a3e5562 78 Gene3D G3DSA:1.20.58.990 6 61 1.1E-11 T 13-10-2018 IPR037208 Aspartyl-phosphate phosphatase Spo0E-like superfamily GO:0043937 COP00_24165 51d5a452fa85a8bcbe5323499a3e5562 78 SUPERFAMILY SSF140500 7 58 5.1E-15 T 13-10-2018 IPR037208 Aspartyl-phosphate phosphatase Spo0E-like superfamily GO:0043937 COP00_24165 51d5a452fa85a8bcbe5323499a3e5562 78 Pfam PF09388 Spo0E like sporulation regulatory protein 10 51 3.2E-14 T 13-10-2018 IPR018540 Aspartyl-phosphate phosphatase Spo0E-like GO:0043937 COP00_03515 57f33ef1505ff67b582a5f41205275b8 179 ProSitePatterns PS00194 Thioredoxin family active site. 69 87 - T 13-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 COP00_03515 57f33ef1505ff67b582a5f41205275b8 179 Gene3D G3DSA:3.40.30.10 25 178 4.5E-47 T 13-10-2018 COP00_03515 57f33ef1505ff67b582a5f41205275b8 179 SUPERFAMILY SSF52833 40 177 1.04E-43 T 13-10-2018 IPR036249 Thioredoxin-like superfamily COP00_03515 57f33ef1505ff67b582a5f41205275b8 179 Pfam PF00578 AhpC/TSA family 43 156 7.8E-31 T 13-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 COP00_09535 adaaec15e676fc69a9227d281d5d53dc 60 ProDom PD052690 CSE60 CYTOSOLIC YTEV LJ928 SPORULATION ORF85 PROPHAGE 1 59 2.0E-27 T 13-10-2018 IPR020296 Sporulation protein Cse60 COP00_09535 adaaec15e676fc69a9227d281d5d53dc 60 Pfam PF10957 Sporulation protein Cse60 1 60 5.3E-37 T 13-10-2018 IPR020296 Sporulation protein Cse60 COP00_18245 1dfcb645ead679e48cfca7c951ce29b9 686 Pfam PF05378 Hydantoinase/oxoprolinase N-terminal region 7 182 7.6E-47 T 13-10-2018 IPR008040 Hydantoinaseoxoprolinase, N-terminal Reactome: R-HSA-174403|Reactome: R-HSA-5578998 COP00_18245 1dfcb645ead679e48cfca7c951ce29b9 686 Pfam PF01968 Hydantoinase/oxoprolinase 205 489 7.6E-86 T 13-10-2018 IPR002821 Hydantoinase A/oxoprolinase GO:0016787 Reactome: R-HSA-174403|Reactome: R-HSA-5578998 COP00_18245 1dfcb645ead679e48cfca7c951ce29b9 686 SUPERFAMILY SSF53067 6 483 4.83E-7 T 13-10-2018 COP00_18610 1132182973e060ce5f951acbbc1691c0 293 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 8 21 1.4E-10 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 COP00_18610 1132182973e060ce5f951acbbc1691c0 293 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 29 52 1.4E-10 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 COP00_18610 1132182973e060ce5f951acbbc1691c0 293 Pfam PF00440 Bacterial regulatory proteins, tetR family 8 54 3.2E-19 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 COP00_18610 1132182973e060ce5f951acbbc1691c0 293 SUPERFAMILY SSF46689 3 64 3.69E-17 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 COP00_18610 1132182973e060ce5f951acbbc1691c0 293 Gene3D G3DSA:1.10.357.10 1 187 1.8E-27 T 13-10-2018 COP00_01755 7e21d0713bc30d1b279823787f78fc9d 347 TIGRFAM TIGR00692 tdh: L-threonine 3-dehydrogenase 8 346 9.0E-171 T 13-10-2018 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00260+1.1.1.103|MetaCyc: PWY-7378 COP00_01755 7e21d0713bc30d1b279823787f78fc9d 347 Gene3D G3DSA:3.90.180.10 23 338 2.8E-117 T 13-10-2018 COP00_01755 7e21d0713bc30d1b279823787f78fc9d 347 SUPERFAMILY SSF50129 5 178 2.89E-49 T 13-10-2018 IPR011032 GroES-like superfamily COP00_01755 7e21d0713bc30d1b279823787f78fc9d 347 SMART SM00829 17 345 3.0E-7 T 13-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 COP00_01755 7e21d0713bc30d1b279823787f78fc9d 347 SUPERFAMILY SSF51735 146 308 3.29E-36 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily COP00_01755 7e21d0713bc30d1b279823787f78fc9d 347 Pfam PF00107 Zinc-binding dehydrogenase 179 307 7.9E-29 T 13-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 COP00_01755 7e21d0713bc30d1b279823787f78fc9d 347 Gene3D G3DSA:3.40.50.720 158 292 2.8E-117 T 13-10-2018 COP00_01755 7e21d0713bc30d1b279823787f78fc9d 347 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 31 139 2.7E-33 T 13-10-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 COP00_01755 7e21d0713bc30d1b279823787f78fc9d 347 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 67 81 - T 13-10-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 COP00_01755 7e21d0713bc30d1b279823787f78fc9d 347 Hamap MF_00627 L-threonine 3-dehydrogenase [tdh]. 6 347 53.861 T 13-10-2018 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00260+1.1.1.103|MetaCyc: PWY-7378 COP00_02120 8f3bbe06daa837d69177909e4bb4479e 205 Gene3D G3DSA:3.90.79.10 1 205 3.4E-60 T 13-10-2018 COP00_18175 92a71d6e8b639eb439e801472b08e038 227 Gene3D G3DSA:1.10.3720.10 10 223 2.4E-61 T 13-10-2018 IPR035906 MetI-like superfamily COP00_18175 92a71d6e8b639eb439e801472b08e038 227 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 40 222 5.1E-26 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 COP00_18175 92a71d6e8b639eb439e801472b08e038 227 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 19 116 7.1E-31 T 13-10-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0016021|GO:0022857|GO:0043190|GO:0071705 COP00_18175 92a71d6e8b639eb439e801472b08e038 227 SUPERFAMILY SSF161098 20 207 1.83E-50 T 13-10-2018 IPR035906 MetI-like superfamily COP00_09040 803fe2d743c2d8da1aaa3f32384ae709 128 TIGRFAM TIGR03330 SAM_DCase_Bsu: S-adenosylmethionine decarboxylase proenzyme 3 112 1.8E-41 T 13-10-2018 IPR017716 S-adenosylmethionine decarboxylase proenzyme GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 COP00_09040 803fe2d743c2d8da1aaa3f32384ae709 128 Gene3D G3DSA:3.30.160.750 63 127 2.9E-18 T 13-10-2018 COP00_09040 803fe2d743c2d8da1aaa3f32384ae709 128 Pfam PF02675 S-adenosylmethionine decarboxylase 7 112 2.2E-36 T 13-10-2018 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 COP00_09040 803fe2d743c2d8da1aaa3f32384ae709 128 SUPERFAMILY SSF56276 2 113 5.49E-40 T 13-10-2018 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|Reactome: R-HSA-351202 COP00_09040 803fe2d743c2d8da1aaa3f32384ae709 128 Hamap MF_00464 S-adenosylmethionine decarboxylase proenzyme [speH]. 1 116 32.009 T 13-10-2018 IPR017716 S-adenosylmethionine decarboxylase proenzyme GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 COP00_09040 803fe2d743c2d8da1aaa3f32384ae709 128 Gene3D G3DSA:3.30.360.110 1 62 5.8E-26 T 13-10-2018 COP00_20935 e0d87bb5b18fb90316c78ed33ec2b408 192 SUPERFAMILY SSF46689 2 57 8.51E-15 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 COP00_20935 e0d87bb5b18fb90316c78ed33ec2b408 192 Pfam PF00440 Bacterial regulatory proteins, tetR family 8 54 1.8E-14 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 COP00_20935 e0d87bb5b18fb90316c78ed33ec2b408 192 Gene3D G3DSA:1.10.357.10 1 191 6.3E-24 T 13-10-2018 COP00_20935 e0d87bb5b18fb90316c78ed33ec2b408 192 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 29 52 8.1E-10 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 COP00_20935 e0d87bb5b18fb90316c78ed33ec2b408 192 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 8 21 8.1E-10 T 13-10-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 COP00_17300 5f982bfaa739631a9dc4b07694d9685e 798 Pfam PF12846 AAA-like domain 409 782 3.7E-129 T 13-10-2018 COP00_17300 5f982bfaa739631a9dc4b07694d9685e 798 SUPERFAMILY SSF52540 423 765 1.13E-24 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_17300 5f982bfaa739631a9dc4b07694d9685e 798 Gene3D G3DSA:3.40.50.300 404 570 1.4E-9 T 13-10-2018 COP00_17300 5f982bfaa739631a9dc4b07694d9685e 798 Gene3D G3DSA:3.40.50.300 594 782 3.4E-10 T 13-10-2018 COP00_17300 5f982bfaa739631a9dc4b07694d9685e 798 PIRSF PIRSF015040 1 798 5.7E-278 T 13-10-2018 IPR016628 ATPase, SAG2001, predicted COP00_01325 ce0b94102689010a232a6b06071cc39d 180 Pfam PF00227 Proteasome subunit 5 177 8.1E-27 T 13-10-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8939236|Reactome: R-HSA-8939902|Reactome: R-HSA-8941858|Reactome: R-HSA-8948751|Reactome: R-HSA-8951664|Reactome: R-HSA-9010553|Reactome: R-HSA-9020702|Reactome: R-HSA-9604323|Reactome: R-HSA-983168 COP00_01325 ce0b94102689010a232a6b06071cc39d 180 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 7 179 8.2E-84 T 13-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 COP00_01325 ce0b94102689010a232a6b06071cc39d 180 PIRSF PIRSF039093 1 180 7.3E-86 T 13-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 COP00_01325 ce0b94102689010a232a6b06071cc39d 180 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 6 179 41.871 T 13-10-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 COP00_01325 ce0b94102689010a232a6b06071cc39d 180 SUPERFAMILY SSF56235 4 179 2.24E-60 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal COP00_01325 ce0b94102689010a232a6b06071cc39d 180 Gene3D G3DSA:3.60.20.10 2 180 8.3E-69 T 13-10-2018 IPR029055 Nucleophile aminohydrolases, N-terminal COP00_03520 9f1b74e0e37954142879b38779aa1413 266 Gene3D G3DSA:1.20.1260.120 1 265 1.7E-94 T 13-10-2018 COP00_03520 9f1b74e0e37954142879b38779aa1413 266 SUPERFAMILY SSF158430 125 258 1.18E-40 T 13-10-2018 COP00_03520 9f1b74e0e37954142879b38779aa1413 266 SUPERFAMILY SSF158430 4 123 1.29E-32 T 13-10-2018 COP00_03520 9f1b74e0e37954142879b38779aa1413 266 Pfam PF11155 Domain of unknown function (DUF2935) 127 245 9.6E-29 T 13-10-2018 IPR021328 Protein of unknown function DUF2935 COP00_03520 9f1b74e0e37954142879b38779aa1413 266 Pfam PF11155 Domain of unknown function (DUF2935) 8 112 1.4E-22 T 13-10-2018 IPR021328 Protein of unknown function DUF2935 COP00_00510 3b0572ad639858b3c3c503a6b6659ada 221 Gene3D G3DSA:3.40.50.720 1 136 6.5E-40 T 13-10-2018 COP00_00510 3b0572ad639858b3c3c503a6b6659ada 221 Pfam PF02254 TrkA-N domain 5 120 1.5E-31 T 13-10-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 COP00_00510 3b0572ad639858b3c3c503a6b6659ada 221 SUPERFAMILY SSF51735 4 134 8.16E-39 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily COP00_00510 3b0572ad639858b3c3c503a6b6659ada 221 SUPERFAMILY SSF116726 131 215 6.28E-22 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 COP00_00510 3b0572ad639858b3c3c503a6b6659ada 221 Gene3D G3DSA:3.30.70.1450 137 217 5.3E-29 T 13-10-2018 IPR036721 Regulator of K+ conductance, C-terminal domain superfamily GO:0006813 COP00_00510 3b0572ad639858b3c3c503a6b6659ada 221 Pfam PF02080 TrkA-C domain 150 216 5.2E-17 T 13-10-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 COP00_19280 26041064997f79a2aae71b30643bd0eb 127 Pfam PF01638 HxlR-like helix-turn-helix 26 114 1.0E-40 T 13-10-2018 IPR002577 Helix-turn-helix, HxlR type COP00_19280 26041064997f79a2aae71b30643bd0eb 127 Gene3D G3DSA:1.10.10.10 10 118 3.2E-41 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_19280 26041064997f79a2aae71b30643bd0eb 127 SUPERFAMILY SSF46785 15 118 7.12E-35 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_04190 0217cd52587803ba63637e2d4c8c5757 76 TIGRFAM TIGR01764 excise: DNA binding domain, excisionase family 2 50 2.6E-15 T 13-10-2018 IPR010093 SinI-like, DNA-binding domain GO:0003677 COP00_04190 0217cd52587803ba63637e2d4c8c5757 76 Gene3D G3DSA:1.10.1660.10 1 51 2.8E-5 T 13-10-2018 COP00_04190 0217cd52587803ba63637e2d4c8c5757 76 Pfam PF12728 Helix-turn-helix domain 2 50 2.4E-9 T 13-10-2018 COP00_03500 541433d245e0c1ff400fb5d7a8b75662 175 Pfam PF13302 Acetyltransferase (GNAT) domain 5 138 1.4E-23 T 13-10-2018 IPR000182 GNAT domain COP00_03500 541433d245e0c1ff400fb5d7a8b75662 175 SUPERFAMILY SSF55729 3 162 2.87E-40 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase COP00_03500 541433d245e0c1ff400fb5d7a8b75662 175 Gene3D G3DSA:3.40.630.30 4 171 1.1E-49 T 13-10-2018 COP00_19905 1249a3e9ff0ff02b8d2d616000924a77 272 Pfam PF07870 Protein of unknown function (DUF1657) 223 268 1.2E-16 T 13-10-2018 IPR012452 Protein of unknown function DUF1657 COP00_19905 1249a3e9ff0ff02b8d2d616000924a77 272 Pfam PF04239 Protein of unknown function (DUF421) 75 190 8.5E-32 T 13-10-2018 IPR007353 Protein of unknown function DUF421 COP00_19905 1249a3e9ff0ff02b8d2d616000924a77 272 Gene3D G3DSA:3.30.240.20 156 215 1.1E-16 T 13-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily COP00_19905 1249a3e9ff0ff02b8d2d616000924a77 272 Gene3D G3DSA:3.30.240.20 67 140 2.5E-23 T 13-10-2018 IPR023090 UPF0702, alpha/beta domain superfamily COP00_20950 bda04b88d8fb0e96c5fb26e5d596929a 401 Gene3D G3DSA:1.20.1250.20 9 401 2.2E-90 T 13-10-2018 COP00_20950 bda04b88d8fb0e96c5fb26e5d596929a 401 SUPERFAMILY SSF103473 9 399 2.75E-86 T 13-10-2018 IPR036259 MFS transporter superfamily COP00_20950 bda04b88d8fb0e96c5fb26e5d596929a 401 ProSitePatterns PS00217 Sugar transport proteins signature 2. 108 133 - T 13-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 COP00_20950 bda04b88d8fb0e96c5fb26e5d596929a 401 Pfam PF07690 Major Facilitator Superfamily 21 267 5.6E-39 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 COP00_19360 8a05950c4efc361a099f749e37a27e5b 149 ProSitePatterns PS00893 Nudix box signature. 36 57 - T 13-10-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 COP00_19360 8a05950c4efc361a099f749e37a27e5b 149 Pfam PF00293 NUDIX domain 12 122 2.1E-19 T 13-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 COP00_19360 8a05950c4efc361a099f749e37a27e5b 149 SUPERFAMILY SSF55811 8 128 5.15E-30 T 13-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 COP00_19360 8a05950c4efc361a099f749e37a27e5b 149 PRINTS PR00502 NUDIX hydrolase family signature 31 45 3.3E-6 T 13-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 COP00_19360 8a05950c4efc361a099f749e37a27e5b 149 PRINTS PR00502 NUDIX hydrolase family signature 45 60 3.3E-6 T 13-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 COP00_19360 8a05950c4efc361a099f749e37a27e5b 149 Gene3D G3DSA:3.90.79.10 6 137 2.6E-31 T 13-10-2018 COP00_07085 a6cca81298da20d8f6f888300e1bf47a 142 Gene3D G3DSA:3.30.1490.190 87 141 1.1E-14 T 13-10-2018 COP00_07085 a6cca81298da20d8f6f888300e1bf47a 142 Pfam PF01475 Ferric uptake regulator family 12 129 2.8E-31 T 13-10-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 COP00_07085 a6cca81298da20d8f6f888300e1bf47a 142 SUPERFAMILY SSF46785 5 133 2.07E-34 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_07085 a6cca81298da20d8f6f888300e1bf47a 142 Gene3D G3DSA:1.10.10.10 1 83 1.8E-18 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_10440 9537686586e58e22aa23ab81b280b6f2 446 Pfam PF03390 2-hydroxycarboxylate transporter family 29 439 8.3E-162 T 13-10-2018 IPR004679 2-hydroxycarboxylate transporter GO:0008514|GO:0015711|GO:0016021 COP00_10440 9537686586e58e22aa23ab81b280b6f2 446 PIRSF PIRSF005348 10 445 9.7E-175 T 13-10-2018 IPR004679 2-hydroxycarboxylate transporter GO:0008514|GO:0015711|GO:0016021 COP00_10440 9537686586e58e22aa23ab81b280b6f2 446 TIGRFAM TIGR00783 ccs: citrate carrier protein, CCS family 23 440 2.3E-172 T 13-10-2018 IPR018025 2-hydroxycarboxylate transporter, Proteobacteria/Firmicutes COP00_09635 3333f5dd9c7c16139584a897134e2535 389 PRINTS PR01035 Tetracycline resistance protein signature 331 354 2.5E-5 T 13-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 COP00_09635 3333f5dd9c7c16139584a897134e2535 389 PRINTS PR01035 Tetracycline resistance protein signature 129 151 2.5E-5 T 13-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 COP00_09635 3333f5dd9c7c16139584a897134e2535 389 PRINTS PR01035 Tetracycline resistance protein signature 157 177 2.5E-5 T 13-10-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 COP00_09635 3333f5dd9c7c16139584a897134e2535 389 Gene3D G3DSA:1.20.1250.20 198 387 1.3E-20 T 13-10-2018 COP00_09635 3333f5dd9c7c16139584a897134e2535 389 Gene3D G3DSA:1.20.1250.20 2 185 3.9E-24 T 13-10-2018 COP00_09635 3333f5dd9c7c16139584a897134e2535 389 SUPERFAMILY SSF103473 3 387 7.06E-52 T 13-10-2018 IPR036259 MFS transporter superfamily COP00_09635 3333f5dd9c7c16139584a897134e2535 389 Pfam PF07690 Major Facilitator Superfamily 8 226 1.4E-20 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 COP00_22035 c27ba11f6c8b389c67dac109f175f142 287 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 6 239 3.1E-18 T 13-10-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 COP00_22035 c27ba11f6c8b389c67dac109f175f142 287 Pfam PF08282 haloacid dehalogenase-like hydrolase 7 266 6.3E-52 T 13-10-2018 COP00_22035 c27ba11f6c8b389c67dac109f175f142 287 Gene3D G3DSA:3.30.1240.10 83 194 1.3E-84 T 13-10-2018 COP00_22035 c27ba11f6c8b389c67dac109f175f142 287 Gene3D G3DSA:3.40.50.1000 6 263 1.3E-84 T 13-10-2018 IPR023214 HAD superfamily COP00_22035 c27ba11f6c8b389c67dac109f175f142 287 SUPERFAMILY SSF56784 3 271 2.91E-55 T 13-10-2018 IPR036412 HAD-like superfamily COP00_22035 c27ba11f6c8b389c67dac109f175f142 287 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 6 265 2.0E-44 T 13-10-2018 IPR000150 Cof family GO:0016787 COP00_19110 0f3034975d1d1417e17acf13005156a0 152 Pfam PF10263 SprT-like family 7 97 8.1E-14 T 13-10-2018 IPR006640 SprT-like COP00_19110 0f3034975d1d1417e17acf13005156a0 152 Hamap MF_00745 Protein SprT-like. 4 148 39.347 T 13-10-2018 IPR023524 Uncharacterised protein family SprT-like COP00_19110 0f3034975d1d1417e17acf13005156a0 152 SMART SM00731 4 148 6.8E-54 T 13-10-2018 IPR006640 SprT-like COP00_19110 0f3034975d1d1417e17acf13005156a0 152 Pfam PF17283 SprT-like zinc ribbon domain 115 146 4.0E-7 T 13-10-2018 IPR035240 SprT-like, zinc ribbon domain COP00_10655 917bcd957ee21dbd1e7f1d33842bc384 106 Pfam PF14068 Putative membrane protein 7 106 2.2E-43 T 13-10-2018 IPR025917 Putative membrane protein YuiB COP00_10775 cd7f6b48e3630d10c0661ae6bbe9167c 320 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 228 244 - T 13-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site COP00_10775 cd7f6b48e3630d10c0661ae6bbe9167c 320 Gene3D G3DSA:3.40.50.720 101 288 4.7E-124 T 13-10-2018 COP00_10775 cd7f6b48e3630d10c0661ae6bbe9167c 320 SUPERFAMILY SSF51735 103 290 2.48E-62 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily COP00_10775 cd7f6b48e3630d10c0661ae6bbe9167c 320 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 111 289 4.0E-66 T 13-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 COP00_10775 cd7f6b48e3630d10c0661ae6bbe9167c 320 Gene3D G3DSA:3.40.50.720 7 314 4.7E-124 T 13-10-2018 COP00_10775 cd7f6b48e3630d10c0661ae6bbe9167c 320 SUPERFAMILY SSF52283 3 136 1.1E-36 T 13-10-2018 COP00_10775 cd7f6b48e3630d10c0661ae6bbe9167c 320 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 151 178 - T 13-10-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 COP00_10775 cd7f6b48e3630d10c0661ae6bbe9167c 320 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 6 318 7.4E-33 T 13-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 COP00_13490 e268c5179c8df166f66e8dfb182e670b 532 Pfam PF04434 SWIM zinc finger 66 98 2.2E-7 T 13-10-2018 IPR007527 Zinc finger, SWIM-type GO:0008270 COP00_09820 77d93273b4f32911a38e4597565df1e2 325 Gene3D G3DSA:3.40.50.1980 211 325 4.7E-41 T 13-10-2018 COP00_09820 77d93273b4f32911a38e4597565df1e2 325 Gene3D G3DSA:3.40.50.1980 25 210 1.6E-59 T 13-10-2018 COP00_09820 77d93273b4f32911a38e4597565df1e2 325 SUPERFAMILY SSF53807 35 323 7.36E-86 T 13-10-2018 COP00_09820 77d93273b4f32911a38e4597565df1e2 325 PRINTS PR00690 Adhesin family signature 208 229 2.1E-12 T 13-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 COP00_09820 77d93273b4f32911a38e4597565df1e2 325 PRINTS PR00690 Adhesin family signature 80 97 2.1E-12 T 13-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 COP00_09820 77d93273b4f32911a38e4597565df1e2 325 PRINTS PR00690 Adhesin family signature 261 279 2.1E-12 T 13-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 COP00_09820 77d93273b4f32911a38e4597565df1e2 325 PRINTS PR00690 Adhesin family signature 67 80 2.1E-12 T 13-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 COP00_09820 77d93273b4f32911a38e4597565df1e2 325 PRINTS PR00690 Adhesin family signature 36 54 2.1E-12 T 13-10-2018 IPR006128 Adhesion lipoprotein GO:0007155 COP00_09820 77d93273b4f32911a38e4597565df1e2 325 Pfam PF01297 Zinc-uptake complex component A periplasmic 39 321 7.5E-76 T 13-10-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 COP00_09820 77d93273b4f32911a38e4597565df1e2 325 PRINTS PR00691 Adhesin B signature 257 274 8.2E-12 T 13-10-2018 IPR006129 Adhesin B GO:0007155 COP00_09820 77d93273b4f32911a38e4597565df1e2 325 PRINTS PR00691 Adhesin B signature 80 99 8.2E-12 T 13-10-2018 IPR006129 Adhesin B GO:0007155 COP00_09820 77d93273b4f32911a38e4597565df1e2 325 PRINTS PR00691 Adhesin B signature 61 79 8.2E-12 T 13-10-2018 IPR006129 Adhesin B GO:0007155 COP00_09820 77d93273b4f32911a38e4597565df1e2 325 PRINTS PR00691 Adhesin B signature 36 57 8.2E-12 T 13-10-2018 IPR006129 Adhesin B GO:0007155 COP00_09820 77d93273b4f32911a38e4597565df1e2 325 PRINTS PR00691 Adhesin B signature 208 225 8.2E-12 T 13-10-2018 IPR006129 Adhesin B GO:0007155 COP00_09820 77d93273b4f32911a38e4597565df1e2 325 PRINTS PR00691 Adhesin B signature 301 319 8.2E-12 T 13-10-2018 IPR006129 Adhesin B GO:0007155 COP00_03760 09bdeafc6fa81b0a82948caa13262c2d 180 SUPERFAMILY SSF89155 7 168 2.75E-28 T 13-10-2018 IPR036411 TorD-like superfamily COP00_03760 09bdeafc6fa81b0a82948caa13262c2d 180 TIGRFAM TIGR00684 narJ: nitrate reductase molybdenum cofactor assembly chaperone 14 163 4.7E-51 T 13-10-2018 IPR003765 Nitrate reductase chaperone, NarJ GO:0051082|GO:0051131 COP00_03760 09bdeafc6fa81b0a82948caa13262c2d 180 Gene3D G3DSA:1.20.120.700 13 161 4.8E-11 T 13-10-2018 COP00_03760 09bdeafc6fa81b0a82948caa13262c2d 180 Gene3D G3DSA:1.10.4070.10 72 154 4.8E-11 T 13-10-2018 COP00_03760 09bdeafc6fa81b0a82948caa13262c2d 180 Pfam PF02613 Nitrate reductase delta subunit 44 130 9.7E-9 T 13-10-2018 IPR020945 DMSO/Nitrate reductase chaperone COP00_01615 7ae427420339bb7c79cd9f0fe169fc98 320 SUPERFAMILY SSF88713 98 313 5.48E-59 T 13-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 COP00_01615 7ae427420339bb7c79cd9f0fe169fc98 320 Pfam PF01522 Polysaccharide deacetylase 134 245 6.4E-31 T 13-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 COP00_01615 7ae427420339bb7c79cd9f0fe169fc98 320 TIGRFAM TIGR02873 spore_ylxY: probable sporulation protein, polysaccharide deacetylase family 46 312 1.8E-140 T 13-10-2018 IPR014228 Sporulation protein, polysaccharide deacetylase, YlxY COP00_01615 7ae427420339bb7c79cd9f0fe169fc98 320 Gene3D G3DSA:3.20.20.370 85 316 2.3E-59 T 13-10-2018 COP00_23515 cc3be6c9110f332fcd2001f8b4a439f6 136 TIGRFAM TIGR01593 holin_tox_secr: toxin secretion/phage lysis holin 9 135 2.1E-27 T 13-10-2018 IPR006480 Bacteriophage holin family COP00_23515 cc3be6c9110f332fcd2001f8b4a439f6 136 Pfam PF05105 Bacteriophage holin family 15 131 2.0E-36 T 13-10-2018 IPR006480 Bacteriophage holin family COP00_01870 9e92e8c6f26619e9b8b26b8827ef0260 221 SUPERFAMILY SSF141371 100 176 1.14E-6 T 13-10-2018 COP00_01870 9e92e8c6f26619e9b8b26b8827ef0260 221 Pfam PF07238 PilZ domain 100 207 2.5E-15 T 13-10-2018 IPR009875 PilZ domain GO:0035438 COP00_01870 9e92e8c6f26619e9b8b26b8827ef0260 221 Pfam PF12945 Flagellar protein YcgR 4 91 1.2E-13 T 13-10-2018 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal COP00_01870 9e92e8c6f26619e9b8b26b8827ef0260 221 Gene3D G3DSA:2.40.10.220 101 212 1.1E-9 T 13-10-2018 COP00_00380 3d2f0feb65b89101ae51f7ba608f4512 195 SUPERFAMILY SSF53448 6 186 3.34E-23 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases COP00_00380 3d2f0feb65b89101ae51f7ba608f4512 195 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 1 189 21.346 T 13-10-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 COP00_00380 3d2f0feb65b89101ae51f7ba608f4512 195 Pfam PF12804 MobA-like NTP transferase domain 6 142 1.0E-25 T 13-10-2018 IPR025877 MobA-like NTP transferase COP00_00380 3d2f0feb65b89101ae51f7ba608f4512 195 Gene3D G3DSA:3.90.550.10 5 193 1.1E-39 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases COP00_17855 5e23c243bbd2f102ea8b504882aea098 357 Pfam PF11611 Domain of unknown function (DUF4352) 34 150 1.0E-22 T 13-10-2018 IPR029051 Domain of unknown function DUF4352 COP00_17855 5e23c243bbd2f102ea8b504882aea098 357 Pfam PF17118 Domain of unknown function (DUF5105) 165 355 5.5E-57 T 13-10-2018 IPR031343 Domain of unknown function DUF5105 COP00_17855 5e23c243bbd2f102ea8b504882aea098 357 Gene3D G3DSA:2.60.40.1240 34 161 1.7E-18 T 13-10-2018 IPR029050 Immunoprotective extracellular, immunoglobulin-like domain superfamily COP00_23690 6a3ee446c3229daaf739462a5af61faa 422 SUPERFAMILY SSF103473 6 408 5.36E-84 T 13-10-2018 IPR036259 MFS transporter superfamily COP00_23690 6a3ee446c3229daaf739462a5af61faa 422 Pfam PF07690 Major Facilitator Superfamily 13 367 1.4E-58 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 COP00_23690 6a3ee446c3229daaf739462a5af61faa 422 Gene3D G3DSA:1.20.1250.20 207 409 1.4E-28 T 13-10-2018 COP00_23690 6a3ee446c3229daaf739462a5af61faa 422 Gene3D G3DSA:1.20.1250.20 2 199 7.3E-51 T 13-10-2018 COP00_08965 731c373986627df519121790aed4a2a0 66 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 64 18.872 T 13-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 COP00_08965 731c373986627df519121790aed4a2a0 66 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 31 - T 13-10-2018 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 COP00_08965 731c373986627df519121790aed4a2a0 66 Gene3D G3DSA:2.40.50.530 1 63 3.0E-21 T 13-10-2018 COP00_08965 731c373986627df519121790aed4a2a0 66 SUPERFAMILY SSF143034 2 62 6.15E-22 T 13-10-2018 IPR037229 Ribosomal protein L35 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_08965 731c373986627df519121790aed4a2a0 66 Pfam PF01632 Ribosomal protein L35 2 61 6.1E-25 T 13-10-2018 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_08965 731c373986627df519121790aed4a2a0 66 PRINTS PR00064 Ribosomal protein L35 signature 21 35 6.5E-22 T 13-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 COP00_08965 731c373986627df519121790aed4a2a0 66 PRINTS PR00064 Ribosomal protein L35 signature 36 54 6.5E-22 T 13-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 COP00_08965 731c373986627df519121790aed4a2a0 66 PRINTS PR00064 Ribosomal protein L35 signature 3 20 6.5E-22 T 13-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 COP00_08965 731c373986627df519121790aed4a2a0 66 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 62 4.3E-26 T 13-10-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 COP00_13190 5c11d475aac74ff7eefcefa9cb2ef9a5 393 Gene3D G3DSA:3.40.50.2000 209 369 2.7E-32 T 13-10-2018 COP00_13190 5c11d475aac74ff7eefcefa9cb2ef9a5 393 SUPERFAMILY SSF53756 3 388 2.67E-68 T 13-10-2018 COP00_13190 5c11d475aac74ff7eefcefa9cb2ef9a5 393 Gene3D G3DSA:3.40.50.2000 1 208 2.8E-26 T 13-10-2018 COP00_13190 5c11d475aac74ff7eefcefa9cb2ef9a5 393 Pfam PF13579 Glycosyl transferase 4-like domain 25 178 1.7E-17 T 13-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 COP00_13190 5c11d475aac74ff7eefcefa9cb2ef9a5 393 Pfam PF00534 Glycosyl transferases group 1 206 362 1.5E-29 T 13-10-2018 IPR001296 Glycosyl transferase, family 1 COP00_11760 a6db8f3c9d74d2b33e7fa2cf1cc3f3b0 146 Gene3D G3DSA:1.10.10.10 52 138 3.1E-6 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_11760 a6db8f3c9d74d2b33e7fa2cf1cc3f3b0 146 TIGRFAM TIGR01637 phage_arpU: phage transcriptional regulator, ArpU family 5 140 6.6E-41 T 13-10-2018 IPR006524 Transcription activator, ArpU family COP00_11760 a6db8f3c9d74d2b33e7fa2cf1cc3f3b0 146 SUPERFAMILY SSF88659 72 138 1.99E-5 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like COP00_14210 4718e4ce48b84220362a0036c017dbb5 100 Pfam PF17261 Family of unknown function (DUF5327) 1 100 1.9E-26 T 13-10-2018 IPR035218 Protein of unknown function DUF5327 COP00_14210 4718e4ce48b84220362a0036c017dbb5 100 ProDom PD705231 YWDI GROUP-SPECIFIC 1 100 2.0E-35 T 13-10-2018 IPR035218 Protein of unknown function DUF5327 COP00_13415 e40c14f1761e62659a9f70b48e0808b6 322 Pfam PF02653 Branched-chain amino acid transport system / permease component 47 314 4.2E-50 T 13-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 COP00_00110 ef2a10f5fcb16045bc79ea8c878ff22f 97 Pfam PF08863 YolD-like protein 15 90 1.9E-18 T 13-10-2018 IPR014962 YolD-like protein COP00_14270 619a194614e66fe3dd68775948a1ef10 249 Pfam PF00881 Nitroreductase family 8 165 1.3E-19 T 13-10-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 COP00_14270 619a194614e66fe3dd68775948a1ef10 249 SUPERFAMILY SSF55469 1 248 7.72E-72 T 13-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 COP00_14270 619a194614e66fe3dd68775948a1ef10 249 Gene3D G3DSA:3.40.109.10 1 249 1.3E-76 T 13-10-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 COP00_14270 619a194614e66fe3dd68775948a1ef10 249 PIRSF PIRSF005426 1 249 3.2E-91 T 13-10-2018 IPR016446 Flavin oxidoreductase Frp family GO:0016491|GO:0055114 COP00_13930 9095011a3de12ba4051ff5df2d2d6a4a 183 Pfam PF13411 MerR HTH family regulatory protein 1 62 7.7E-14 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 COP00_13930 9095011a3de12ba4051ff5df2d2d6a4a 183 Hamap MF_01170 Chromosome-anchoring protein RacA [racA]. 1 183 20.882 T 13-10-2018 IPR023522 Chromosome-anchoring protein RacA COP00_13930 9095011a3de12ba4051ff5df2d2d6a4a 183 SUPERFAMILY SSF46955 1 110 2.93E-9 T 13-10-2018 IPR009061 Putative DNA-binding domain superfamily COP00_13930 9095011a3de12ba4051ff5df2d2d6a4a 183 Gene3D G3DSA:1.10.1660.10 1 66 1.0E-23 T 13-10-2018 COP00_10970 ecafa96aaa4d58bb53d76636f952112e 303 SUPERFAMILY SSF160240 219 294 1.44E-10 T 13-10-2018 IPR036837 Cation efflux protein, cytoplasmic domain superfamily Reactome: R-HSA-435368 COP00_10970 ecafa96aaa4d58bb53d76636f952112e 303 Pfam PF01545 Cation efflux family 23 215 1.3E-49 T 13-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 COP00_10970 ecafa96aaa4d58bb53d76636f952112e 303 SUPERFAMILY SSF161111 17 216 4.32E-58 T 13-10-2018 IPR027469 Cation efflux transmembrane domain superfamily COP00_10970 ecafa96aaa4d58bb53d76636f952112e 303 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 19 295 1.7E-95 T 13-10-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 COP00_10970 ecafa96aaa4d58bb53d76636f952112e 303 Gene3D G3DSA:1.20.1510.10 19 215 4.9E-46 T 13-10-2018 IPR027469 Cation efflux transmembrane domain superfamily COP00_11475 26d8a3b325c4a7eef9ba479348d76e62 183 Pfam PF01965 DJ-1/PfpI family 3 179 2.5E-40 T 13-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 COP00_11475 26d8a3b325c4a7eef9ba479348d76e62 183 Gene3D G3DSA:3.40.50.880 1 182 5.9E-46 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like COP00_11475 26d8a3b325c4a7eef9ba479348d76e62 183 SUPERFAMILY SSF52317 1 182 8.03E-48 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like COP00_05350 8d9b62427204d996d1fb19ac550c84b5 367 PIRSF PIRSF000451 1 364 6.5E-121 T 13-10-2018 IPR011141 Polyketide synthase, type III GO:0009058|GO:0016747 COP00_05350 8d9b62427204d996d1fb19ac550c84b5 367 Gene3D G3DSA:3.40.47.10 218 362 2.6E-37 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 COP00_05350 8d9b62427204d996d1fb19ac550c84b5 367 ProSitePatterns PS00441 Chalcone and stilbene synthases active site. 136 152 - T 13-10-2018 IPR018088 Chalcone/stilbene synthase, active site GO:0009058|GO:0016746 KEGG: 00941+2.3.1.74|MetaCyc: PWY-5135|MetaCyc: PWY-6316|MetaCyc: PWY-6515|MetaCyc: PWY-6787|MetaCyc: PWY-7397|MetaCyc: PWY-7897 COP00_05350 8d9b62427204d996d1fb19ac550c84b5 367 Pfam PF02797 Chalcone and stilbene synthases, C-terminal domain 227 360 1.6E-16 T 13-10-2018 IPR012328 Chalcone/stilbene synthase, C-terminal COP00_05350 8d9b62427204d996d1fb19ac550c84b5 367 SUPERFAMILY SSF53901 219 361 2.07E-35 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 COP00_05350 8d9b62427204d996d1fb19ac550c84b5 367 SUPERFAMILY SSF53901 1 208 7.2E-43 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 COP00_05350 8d9b62427204d996d1fb19ac550c84b5 367 Pfam PF00195 Chalcone and stilbene synthases, N-terminal domain 2 203 1.7E-18 T 13-10-2018 IPR001099 Chalcone/stilbene synthase, N-terminal COP00_05350 8d9b62427204d996d1fb19ac550c84b5 367 Gene3D G3DSA:3.40.47.10 1 212 1.6E-60 T 13-10-2018 IPR016039 Thiolase-like GO:0003824 COP00_03545 af1bc257fac12a7852021495f6deb00a 277 Pfam PF01145 SPFH domain / Band 7 family 37 220 5.4E-28 T 13-10-2018 IPR001107 Band 7 domain COP00_03545 af1bc257fac12a7852021495f6deb00a 277 SUPERFAMILY SSF117892 67 205 4.05E-8 T 13-10-2018 IPR036013 Band 7/SPFH domain superfamily COP00_06700 89bbd60d585c25bded04eacce28b80c5 291 SUPERFAMILY SSF52151 6 283 8.11E-42 T 13-10-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase COP00_06700 89bbd60d585c25bded04eacce28b80c5 291 Pfam PF01734 Patatin-like phospholipase 6 195 3.6E-31 T 13-10-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 COP00_06700 89bbd60d585c25bded04eacce28b80c5 291 Gene3D G3DSA:3.40.1090.10 2 119 1.6E-25 T 13-10-2018 COP00_06700 89bbd60d585c25bded04eacce28b80c5 291 Gene3D G3DSA:3.40.1090.10 120 288 2.1E-20 T 13-10-2018 COP00_13895 e60080a643617a46292a34ceea72326e 348 SUPERFAMILY SSF51735 2 147 1.49E-40 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily COP00_13895 e60080a643617a46292a34ceea72326e 348 SUPERFAMILY SSF55347 125 297 9.27E-22 T 13-10-2018 COP00_13895 e60080a643617a46292a34ceea72326e 348 Gene3D G3DSA:3.40.50.720 1 116 1.5E-28 T 13-10-2018 COP00_13895 e60080a643617a46292a34ceea72326e 348 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 1 115 1.9E-25 T 13-10-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 COP00_13895 e60080a643617a46292a34ceea72326e 348 Gene3D G3DSA:3.30.360.10 117 331 2.6E-33 T 13-10-2018 COP00_13895 e60080a643617a46292a34ceea72326e 348 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 129 248 1.1E-16 T 13-10-2018 IPR004104 Oxidoreductase, C-terminal GO:0016491|GO:0055114 COP00_21910 4c112af7e8d76f9a904b915bdcc836c2 249 Gene3D G3DSA:3.40.50.1220 14 247 8.3E-70 T 13-10-2018 COP00_21910 4c112af7e8d76f9a904b915bdcc836c2 249 SUPERFAMILY SSF52467 6 247 4.09E-73 T 13-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily COP00_21910 4c112af7e8d76f9a904b915bdcc836c2 249 Hamap MF_01968 NAD-dependent protein deacetylase [cobB]. 7 248 57.825 T 13-10-2018 IPR028628 Sirtuin, class U GO:0034979|GO:0051287 COP00_21910 4c112af7e8d76f9a904b915bdcc836c2 249 Pfam PF02146 Sir2 family 23 202 2.5E-52 T 13-10-2018 IPR003000 Sirtuin family GO:0070403 COP00_21910 4c112af7e8d76f9a904b915bdcc836c2 249 Gene3D G3DSA:3.30.1600.10 32 174 8.3E-70 T 13-10-2018 IPR026591 Sirtuin, catalytic core small domain superfamily COP00_17655 d1a48b14916e37436d4f6d48cbead568 477 PRINTS PR00175 Sodium/alanine symporter signature 301 319 1.4E-54 T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 COP00_17655 d1a48b14916e37436d4f6d48cbead568 477 PRINTS PR00175 Sodium/alanine symporter signature 406 426 1.4E-54 T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 COP00_17655 d1a48b14916e37436d4f6d48cbead568 477 PRINTS PR00175 Sodium/alanine symporter signature 92 114 1.4E-54 T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 COP00_17655 d1a48b14916e37436d4f6d48cbead568 477 PRINTS PR00175 Sodium/alanine symporter signature 346 368 1.4E-54 T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 COP00_17655 d1a48b14916e37436d4f6d48cbead568 477 PRINTS PR00175 Sodium/alanine symporter signature 210 229 1.4E-54 T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 COP00_17655 d1a48b14916e37436d4f6d48cbead568 477 PRINTS PR00175 Sodium/alanine symporter signature 182 200 1.4E-54 T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 COP00_17655 d1a48b14916e37436d4f6d48cbead568 477 Pfam PF01235 Sodium:alanine symporter family 57 449 1.3E-159 T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 COP00_17655 d1a48b14916e37436d4f6d48cbead568 477 TIGRFAM TIGR00835 agcS: amino acid carrier protein 17 437 1.9E-156 T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 COP00_17655 d1a48b14916e37436d4f6d48cbead568 477 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 92 107 - T 13-10-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 COP00_03270 e02366d23f6394a218a05744ffa6bcd6 243 SUPERFAMILY SSF52096 13 193 2.89E-47 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily COP00_03270 e02366d23f6394a218a05744ffa6bcd6 243 PRINTS PR00127 Clp protease catalytic subunit P signature 56 76 1.4E-12 T 13-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 COP00_03270 e02366d23f6394a218a05744ffa6bcd6 243 PRINTS PR00127 Clp protease catalytic subunit P signature 165 184 1.4E-12 T 13-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 COP00_03270 e02366d23f6394a218a05744ffa6bcd6 243 PRINTS PR00127 Clp protease catalytic subunit P signature 106 125 1.4E-12 T 13-10-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 COP00_03270 e02366d23f6394a218a05744ffa6bcd6 243 Pfam PF00574 Clp protease 51 189 1.9E-33 T 13-10-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA COP00_03270 e02366d23f6394a218a05744ffa6bcd6 243 Gene3D G3DSA:3.90.226.10 2 200 2.0E-48 T 13-10-2018 COP00_02010 5fe75cc2bc003045af906b90fa48a3dc 103 Hamap MF_00338 UPF0145 protein YbjQ [ybjQ]. 1 102 23.052 T 13-10-2018 IPR002765 Uncharacterised protein family UPF0145 COP00_02010 5fe75cc2bc003045af906b90fa48a3dc 103 Gene3D G3DSA:3.30.110.70 1 103 2.4E-28 T 13-10-2018 COP00_02010 5fe75cc2bc003045af906b90fa48a3dc 103 Pfam PF01906 Putative heavy-metal-binding 1 102 5.7E-34 T 13-10-2018 IPR002765 Uncharacterised protein family UPF0145 COP00_02010 5fe75cc2bc003045af906b90fa48a3dc 103 SUPERFAMILY SSF117782 1 102 1.27E-32 T 13-10-2018 IPR035439 UPF0145 domain superfamily COP00_11615 361ea702891ca4e7f99aee3d286f65a5 60 Pfam PF09693 Phage uncharacterised protein (Phage_XkdX) 6 45 1.0E-20 T 13-10-2018 IPR010022 Protein of unknown function XkdX COP00_11615 361ea702891ca4e7f99aee3d286f65a5 60 TIGRFAM TIGR01669 phage_XkdX: phage uncharacterized protein, XkdX family 1 45 8.5E-15 T 13-10-2018 IPR010022 Protein of unknown function XkdX COP00_07040 fb7167ee960b0bcce24ab0c40cbff16e 709 Gene3D G3DSA:1.10.10.1230 89 191 2.1E-228 T 13-10-2018 COP00_07040 fb7167ee960b0bcce24ab0c40cbff16e 709 SUPERFAMILY SSF56519 61 315 1.31E-35 T 13-10-2018 IPR036138 Penicillin-binding protein, dimerisation domain superfamily GO:0008658 COP00_07040 fb7167ee960b0bcce24ab0c40cbff16e 709 Pfam PF03717 Penicillin-binding Protein dimerisation domain 62 301 4.2E-35 T 13-10-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 COP00_07040 fb7167ee960b0bcce24ab0c40cbff16e 709 Pfam PF00905 Penicillin binding protein transpeptidase domain 349 680 1.3E-81 T 13-10-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 COP00_07040 fb7167ee960b0bcce24ab0c40cbff16e 709 SUPERFAMILY SSF56601 318 687 5.07E-68 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like COP00_07040 fb7167ee960b0bcce24ab0c40cbff16e 709 Gene3D G3DSA:3.90.1310.30 64 573 2.1E-228 T 13-10-2018 COP00_07040 fb7167ee960b0bcce24ab0c40cbff16e 709 Gene3D G3DSA:3.40.710.10 316 664 2.1E-228 T 13-10-2018 COP00_03575 635986883d52045002c08afdcdaa17f8 207 SUPERFAMILY SSF46785 3 70 5.99E-23 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_03575 635986883d52045002c08afdcdaa17f8 207 TIGRFAM TIGR00498 lexA: repressor LexA 1 206 1.7E-84 T 13-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 COP00_03575 635986883d52045002c08afdcdaa17f8 207 SUPERFAMILY SSF51306 83 204 1.15E-35 T 13-10-2018 IPR036286 LexA/Signal peptidase-like superfamily COP00_03575 635986883d52045002c08afdcdaa17f8 207 Hamap MF_00015 LexA repressor [lexA]. 3 206 34.326 T 13-10-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 COP00_03575 635986883d52045002c08afdcdaa17f8 207 Gene3D G3DSA:1.10.10.10 2 68 8.2E-26 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_03575 635986883d52045002c08afdcdaa17f8 207 Pfam PF01726 LexA DNA binding domain 1 65 1.5E-28 T 13-10-2018 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 COP00_03575 635986883d52045002c08afdcdaa17f8 207 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 161 173 2.8E-9 T 13-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 COP00_03575 635986883d52045002c08afdcdaa17f8 207 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 132 143 2.8E-9 T 13-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 COP00_03575 635986883d52045002c08afdcdaa17f8 207 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 121 131 2.8E-9 T 13-10-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 COP00_03575 635986883d52045002c08afdcdaa17f8 207 Gene3D G3DSA:2.10.109.10 89 206 9.9E-43 T 13-10-2018 COP00_03575 635986883d52045002c08afdcdaa17f8 207 Pfam PF00717 Peptidase S24-like 124 190 4.5E-17 T 13-10-2018 IPR015927 Peptidase S24/S26A/S26B/S26C COP00_09190 f773f91052516f0acb2352c8b048ffc6 459 Gene3D G3DSA:1.20.200.10 120 448 1.0E-194 T 13-10-2018 COP00_09190 f773f91052516f0acb2352c8b048ffc6 459 Pfam PF00206 Lyase 7 301 4.4E-75 T 13-10-2018 IPR022761 Fumarate lyase, N-terminal COP00_09190 f773f91052516f0acb2352c8b048ffc6 459 ProSitePatterns PS00163 Fumarate lyases signature. 276 285 - T 13-10-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 COP00_09190 f773f91052516f0acb2352c8b048ffc6 459 TIGRFAM TIGR00838 argH: argininosuccinate lyase 4 456 3.6E-214 T 13-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 COP00_09190 f773f91052516f0acb2352c8b048ffc6 459 Gene3D G3DSA:1.10.275.10 26 230 1.0E-194 T 13-10-2018 IPR024083 Fumarase/histidase, N-terminal COP00_09190 f773f91052516f0acb2352c8b048ffc6 459 Pfam PF14698 Argininosuccinate lyase C-terminal 364 432 6.2E-25 T 13-10-2018 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 COP00_09190 f773f91052516f0acb2352c8b048ffc6 459 SUPERFAMILY SSF48557 4 456 1.15E-150 T 13-10-2018 IPR008948 L-Aspartase-like GO:0003824 COP00_09190 f773f91052516f0acb2352c8b048ffc6 459 Hamap MF_00006 Argininosuccinate lyase [argH]. 3 454 44.676 T 13-10-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 COP00_09190 f773f91052516f0acb2352c8b048ffc6 459 Gene3D G3DSA:1.10.40.30 361 433 1.0E-194 T 13-10-2018 COP00_09190 f773f91052516f0acb2352c8b048ffc6 459 PRINTS PR00149 Fumarate lyase superfamily signature 103 121 1.2E-29 T 13-10-2018 IPR000362 Fumarate lyase family COP00_09190 f773f91052516f0acb2352c8b048ffc6 459 PRINTS PR00149 Fumarate lyase superfamily signature 148 166 1.2E-29 T 13-10-2018 IPR000362 Fumarate lyase family COP00_09190 f773f91052516f0acb2352c8b048ffc6 459 PRINTS PR00149 Fumarate lyase superfamily signature 276 292 1.2E-29 T 13-10-2018 IPR000362 Fumarate lyase family COP00_09190 f773f91052516f0acb2352c8b048ffc6 459 PRINTS PR00149 Fumarate lyase superfamily signature 232 259 1.2E-29 T 13-10-2018 IPR000362 Fumarate lyase family COP00_09190 f773f91052516f0acb2352c8b048ffc6 459 PRINTS PR00145 Argininosuccinate lyase family signature 311 330 7.9E-69 T 13-10-2018 COP00_09190 f773f91052516f0acb2352c8b048ffc6 459 PRINTS PR00145 Argininosuccinate lyase family signature 143 163 7.9E-69 T 13-10-2018 COP00_09190 f773f91052516f0acb2352c8b048ffc6 459 PRINTS PR00145 Argininosuccinate lyase family signature 276 292 7.9E-69 T 13-10-2018 COP00_09190 f773f91052516f0acb2352c8b048ffc6 459 PRINTS PR00145 Argininosuccinate lyase family signature 232 256 7.9E-69 T 13-10-2018 COP00_09190 f773f91052516f0acb2352c8b048ffc6 459 PRINTS PR00145 Argininosuccinate lyase family signature 194 210 7.9E-69 T 13-10-2018 COP00_09190 f773f91052516f0acb2352c8b048ffc6 459 PRINTS PR00145 Argininosuccinate lyase family signature 102 124 7.9E-69 T 13-10-2018 COP00_24450 037f4be45ea0a778036fe4fa5d7ecf56 114 Pfam PF07252 Protein of unknown function (DUF1433) 36 83 3.7E-9 T 13-10-2018 IPR009881 Protein of unknown function DUF1433 COP00_24450 037f4be45ea0a778036fe4fa5d7ecf56 114 Gene3D G3DSA:3.10.450.130 34 108 8.0E-10 T 13-10-2018 COP00_13690 7671f7a07845fce5dc386ea9e9dc5ec3 405 Gene3D G3DSA:3.60.120.10 4 405 3.3E-133 T 13-10-2018 IPR005801 ADC synthase GO:0009058 COP00_13690 7671f7a07845fce5dc386ea9e9dc5ec3 405 TIGRFAM TIGR00543 isochor_syn: isochorismate synthase 127 398 7.1E-82 T 13-10-2018 IPR004561 Isochorismate synthase GO:0008909|GO:0009058 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 COP00_13690 7671f7a07845fce5dc386ea9e9dc5ec3 405 SUPERFAMILY SSF56322 52 402 2.09E-90 T 13-10-2018 IPR005801 ADC synthase GO:0009058 COP00_13690 7671f7a07845fce5dc386ea9e9dc5ec3 405 Pfam PF00425 chorismate binding enzyme 128 392 1.9E-75 T 13-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal COP00_21835 aa5b63dfd0ee5551c848e1033060a1f0 199 SUPERFAMILY SSF69593 6 196 1.7E-38 T 13-10-2018 COP00_21835 aa5b63dfd0ee5551c848e1033060a1f0 199 TIGRFAM TIGR00530 AGP_acyltrn: 1-acylglycerol-3-phosphate O-acyltransferases 19 141 9.4E-36 T 13-10-2018 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase GO:0003841|GO:0008654|GO:0016020 KEGG: 00561+2.3.1.51|KEGG: 00564+2.3.1.51|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7417|MetaCyc: PWY-7587|MetaCyc: PWY-7589|MetaCyc: PWY-7782|Reactome: R-HSA-1483166 COP00_21835 aa5b63dfd0ee5551c848e1033060a1f0 199 Pfam PF01553 Acyltransferase 19 142 5.2E-24 T 13-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 COP00_21835 aa5b63dfd0ee5551c848e1033060a1f0 199 SMART SM00563 33 144 8.6E-27 T 13-10-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0016746 COP00_23440 2b32684998c695a04ae45ecbb4b6a2b6 149 Gene3D G3DSA:1.20.5.320 55 104 3.5E-5 T 13-10-2018 COP00_23440 2b32684998c695a04ae45ecbb4b6a2b6 149 Pfam PF01391 Collagen triple helix repeat (20 copies) 43 80 1.8E-8 T 13-10-2018 IPR008160 Collagen triple helix repeat COP00_06530 74fdd226cdbd86afcc704bfbec22df95 110 Pfam PF11118 Protein of unknown function (DUF2627) 3 77 5.2E-34 T 13-10-2018 IPR020138 Uncharacterised protein family YqzF COP00_06530 74fdd226cdbd86afcc704bfbec22df95 110 ProDom PD058321 YQZF GSC13 TRANSMEMBRANE IG GKC13 MEMBRANE PROTEINS BH2767 RBL05544 SIMILAR 1 77 2.0E-20 T 13-10-2018 IPR020138 Uncharacterised protein family YqzF COP00_11080 831032ead25d026eb444a13e6ccfa85c 325 Pfam PF01497 Periplasmic binding protein 57 297 9.5E-36 T 13-10-2018 IPR002491 ABC transporter periplasmic binding domain COP00_11080 831032ead25d026eb444a13e6ccfa85c 325 SUPERFAMILY SSF53807 38 318 9.81E-70 T 13-10-2018 COP00_11080 831032ead25d026eb444a13e6ccfa85c 325 Gene3D G3DSA:3.40.50.1980 144 325 2.5E-58 T 13-10-2018 COP00_11080 831032ead25d026eb444a13e6ccfa85c 325 Gene3D G3DSA:3.40.50.1980 36 143 3.6E-37 T 13-10-2018 COP00_20615 ec58bdb101d3892e71c90d2717b39a89 227 SMART SM00382 37 223 3.4E-13 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_20615 ec58bdb101d3892e71c90d2717b39a89 227 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 COP00_20615 ec58bdb101d3892e71c90d2717b39a89 227 Gene3D G3DSA:3.40.50.300 6 226 4.1E-58 T 13-10-2018 COP00_20615 ec58bdb101d3892e71c90d2717b39a89 227 Pfam PF00005 ABC transporter 29 174 2.8E-32 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 COP00_20615 ec58bdb101d3892e71c90d2717b39a89 227 SUPERFAMILY SSF52540 8 225 2.66E-63 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_23915 741e8e71940f6ac023d04d35ea4f0db8 172 SUPERFAMILY SSF54637 7 157 4.56E-48 T 13-10-2018 IPR029069 HotDog domain superfamily COP00_23915 741e8e71940f6ac023d04d35ea4f0db8 172 Pfam PF03061 Thioesterase superfamily 28 100 5.4E-15 T 13-10-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 COP00_23915 741e8e71940f6ac023d04d35ea4f0db8 172 Gene3D G3DSA:3.10.129.10 1 168 3.3E-58 T 13-10-2018 COP00_11980 3b0167d844673b233e22c317f5058d81 511 Gene3D G3DSA:3.40.1450.10 77 312 2.0E-238 T 13-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 COP00_11980 3b0167d844673b233e22c317f5058d81 511 Gene3D G3DSA:3.40.720.10 7 509 2.0E-238 T 13-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 COP00_11980 3b0167d844673b233e22c317f5058d81 511 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 82 299 2.7E-87 T 13-10-2018 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 COP00_11980 3b0167d844673b233e22c317f5058d81 511 Hamap MF_01038 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [gpmI]. 4 510 50.496 T 13-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 COP00_11980 3b0167d844673b233e22c317f5058d81 511 PIRSF PIRSF001492 1 511 3.7E-208 T 13-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 COP00_11980 3b0167d844673b233e22c317f5058d81 511 SUPERFAMILY SSF64158 77 310 4.05E-95 T 13-10-2018 IPR036646 BPG-independent phosphoglycerate mutase, domain B superfamily GO:0004619|GO:0005737 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 COP00_11980 3b0167d844673b233e22c317f5058d81 511 Pfam PF01676 Metalloenzyme superfamily 6 499 1.3E-78 T 13-10-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 COP00_11980 3b0167d844673b233e22c317f5058d81 511 TIGRFAM TIGR01307 pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 6 509 3.3E-215 T 13-10-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 COP00_11980 3b0167d844673b233e22c317f5058d81 511 SUPERFAMILY SSF53649 7 509 3.58E-75 T 13-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 COP00_09030 57fabe327a76687ba2eebbc92d41d8d4 152 Pfam PF03477 ATP cone domain 50 136 7.4E-20 T 13-10-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 COP00_09030 57fabe327a76687ba2eebbc92d41d8d4 152 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 152 85.569 T 13-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 COP00_09030 57fabe327a76687ba2eebbc92d41d8d4 152 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 147 3.6E-73 T 13-10-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 COP00_20255 75300297f0ba45ef55043d94d4a9a20c 76 Pfam PF11127 Protein of unknown function (DUF2892) 1 63 4.7E-12 T 13-10-2018 IPR021309 Protein of unknown function DUF2892 COP00_23580 58943d5d6cb2c901e93f3dfa53a56754 505 Pfam PF15542 Bacterial toxin 50 410 502 2.2E-28 T 13-10-2018 IPR029100 Bacterial toxin 50 COP00_23580 58943d5d6cb2c901e93f3dfa53a56754 505 Pfam PF14449 Pre-toxin TG 314 386 9.0E-13 T 13-10-2018 IPR027797 Pre-toxin TG domain COP00_23580 58943d5d6cb2c901e93f3dfa53a56754 505 Pfam PF04740 LXG domain of WXG superfamily 2 202 6.8E-69 T 13-10-2018 IPR006829 LXG domain COP00_20940 3aec3f8eda8910a1854333c307ed631c 397 Gene3D G3DSA:3.40.50.2000 212 376 3.0E-102 T 13-10-2018 COP00_20940 3aec3f8eda8910a1854333c307ed631c 397 TIGRFAM TIGR01426 MGT: glycosyltransferase, MGT family 8 378 3.7E-93 T 13-10-2018 IPR006326 UDP-glycosyltransferase, MGT GO:0016758|GO:0016999 COP00_20940 3aec3f8eda8910a1854333c307ed631c 397 SUPERFAMILY SSF53756 3 390 1.34E-73 T 13-10-2018 COP00_20940 3aec3f8eda8910a1854333c307ed631c 397 Gene3D G3DSA:3.40.50.2000 5 381 3.0E-102 T 13-10-2018 COP00_20940 3aec3f8eda8910a1854333c307ed631c 397 Pfam PF00201 UDP-glucoronosyl and UDP-glucosyl transferase 228 370 2.1E-17 T 13-10-2018 IPR002213 UDP-glucuronosyl/UDP-glucosyltransferase GO:0016758 Reactome: R-HSA-156588 COP00_24375 65914d3f9bf6b0e75c0e2aad362704b5 112 Pfam PF06600 Protein of unknown function (DUF1140) 9 107 1.3E-28 T 13-10-2018 IPR009520 Protein of unknown function DUF1140 COP00_06535 80aa9c2c12152676718409f0d34fd70f 242 Gene3D G3DSA:3.20.20.190 1 241 3.3E-86 T 13-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 COP00_06535 80aa9c2c12152676718409f0d34fd70f 242 SUPERFAMILY SSF51695 2 237 9.16E-79 T 13-10-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily GO:0006629|GO:0008081 COP00_06535 80aa9c2c12152676718409f0d34fd70f 242 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 7 233 5.7E-55 T 13-10-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 COP00_01550 a0d5ff52c482de12761bc2778ae11496 368 SMART SM00028 327 360 0.46 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 COP00_01550 a0d5ff52c482de12761bc2778ae11496 368 SMART SM00028 253 286 14.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 COP00_01550 a0d5ff52c482de12761bc2778ae11496 368 SMART SM00028 214 247 4.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 COP00_01550 a0d5ff52c482de12761bc2778ae11496 368 SMART SM00028 133 166 40.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 COP00_01550 a0d5ff52c482de12761bc2778ae11496 368 SMART SM00028 174 207 100.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 COP00_01550 a0d5ff52c482de12761bc2778ae11496 368 SMART SM00028 93 126 170.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 COP00_01550 a0d5ff52c482de12761bc2778ae11496 368 Pfam PF13181 Tetratricopeptide repeat 330 358 3.7E-4 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 COP00_01550 a0d5ff52c482de12761bc2778ae11496 368 SUPERFAMILY SSF48452 94 302 2.75E-17 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 COP00_01550 a0d5ff52c482de12761bc2778ae11496 368 Gene3D G3DSA:1.25.40.10 1 365 3.7E-109 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 COP00_03115 5a855223ec9a340455e9a5e24ca03d41 420 Pfam PF16360 GTP-binding GTPase Middle Region 117 195 1.0E-30 T 13-10-2018 IPR032305 GTP-binding protein, middle domain COP00_03115 5a855223ec9a340455e9a5e24ca03d41 420 Gene3D G3DSA:3.40.50.300 202 365 6.5E-30 T 13-10-2018 COP00_03115 5a855223ec9a340455e9a5e24ca03d41 420 SUPERFAMILY SSF52540 200 366 1.62E-34 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_03115 5a855223ec9a340455e9a5e24ca03d41 420 Pfam PF13167 GTP-binding GTPase N-terminal 28 115 3.0E-33 T 13-10-2018 IPR025121 GTPase HflX, N-terminal COP00_03115 5a855223ec9a340455e9a5e24ca03d41 420 Gene3D G3DSA:3.40.50.11060 21 141 7.5E-41 T 13-10-2018 COP00_03115 5a855223ec9a340455e9a5e24ca03d41 420 Hamap MF_00900 GTPase HflX [hflX]. 30 389 47.631 T 13-10-2018 IPR016496 GTPase HflX GO:0005525 COP00_03115 5a855223ec9a340455e9a5e24ca03d41 420 PIRSF PIRSF006809 2 419 7.5E-146 T 13-10-2018 IPR016496 GTPase HflX GO:0005525 COP00_03115 5a855223ec9a340455e9a5e24ca03d41 420 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 203 223 5.0E-8 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 COP00_03115 5a855223ec9a340455e9a5e24ca03d41 420 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 270 288 5.0E-8 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 COP00_03115 5a855223ec9a340455e9a5e24ca03d41 420 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 10 358 1.7E-144 T 13-10-2018 IPR016496 GTPase HflX GO:0005525 COP00_03115 5a855223ec9a340455e9a5e24ca03d41 420 Pfam PF01926 50S ribosome-binding GTPase 202 321 1.9E-18 T 13-10-2018 IPR006073 GTP binding domain GO:0005525 COP00_13250 8a309c8e8c33c885d18be2a9c3164acc 385 PIRSF PIRSF000390 6 373 1.2E-100 T 13-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase COP00_13250 8a309c8e8c33c885d18be2a9c3164acc 385 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 24 365 3.2E-91 T 13-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase COP00_13250 8a309c8e8c33c885d18be2a9c3164acc 385 SUPERFAMILY SSF53383 10 371 7.48E-91 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase COP00_13250 8a309c8e8c33c885d18be2a9c3164acc 385 Gene3D G3DSA:3.40.640.10 8 372 8.6E-105 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 COP00_11550 0bb4c9d6ffa40343fd16bcd9b292debf 186 Pfam PF04545 Sigma-70, region 4 129 177 2.4E-11 T 13-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 COP00_11550 0bb4c9d6ffa40343fd16bcd9b292debf 186 SUPERFAMILY SSF88659 116 180 1.79E-16 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like COP00_11550 0bb4c9d6ffa40343fd16bcd9b292debf 186 Gene3D G3DSA:1.20.140.160 28 182 1.3E-13 T 13-10-2018 COP00_11550 0bb4c9d6ffa40343fd16bcd9b292debf 186 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 51 179 1.1E-17 T 13-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 COP00_09860 74ec42a2858245ab2510b4377dcdaeac 249 SUPERFAMILY SSF52540 1 238 9.52E-75 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_09860 74ec42a2858245ab2510b4377dcdaeac 249 Gene3D G3DSA:3.40.50.300 1 248 1.6E-76 T 13-10-2018 COP00_09860 74ec42a2858245ab2510b4377dcdaeac 249 SMART SM00382 26 216 2.1E-15 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_09860 74ec42a2858245ab2510b4377dcdaeac 249 ProSitePatterns PS00211 ABC transporters family signature. 140 154 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 COP00_09860 74ec42a2858245ab2510b4377dcdaeac 249 PIRSF PIRSF039085 1 244 9.0E-100 T 13-10-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 COP00_09860 74ec42a2858245ab2510b4377dcdaeac 249 Pfam PF00005 ABC transporter 17 168 1.1E-33 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 COP00_00425 a6ddcd5a529a58b54ae3768298a47a09 226 Pfam PF04893 Yip1 domain 18 210 3.8E-25 T 13-10-2018 IPR006977 Yip1 domain GO:0016020 COP00_12460 e5aebd2169ebe9a257844434d55f09b8 269 Gene3D G3DSA:3.30.1490.70 11 181 1.1E-43 T 13-10-2018 COP00_12460 e5aebd2169ebe9a257844434d55f09b8 269 Pfam PF01068 ATP dependent DNA ligase domain 9 182 1.9E-27 T 13-10-2018 IPR012310 DNA ligase, ATP-dependent, central GO:0003910|GO:0005524|GO:0006281|GO:0006310 COP00_12460 e5aebd2169ebe9a257844434d55f09b8 269 SUPERFAMILY SSF56091 3 182 1.42E-41 T 13-10-2018 COP00_12460 e5aebd2169ebe9a257844434d55f09b8 269 Gene3D G3DSA:3.30.470.30 28 139 1.1E-43 T 13-10-2018 COP00_09145 457de792f48abf595227d6bed1325a2b 113 Pfam PF14034 Sporulation protein YtrH 10 108 8.1E-42 T 13-10-2018 IPR025689 Sporulation protein YtrH COP00_11000 343381018abd49c88931a40efcd07795 102 SUPERFAMILY SSF52833 13 99 1.57E-16 T 13-10-2018 IPR036249 Thioredoxin-like superfamily COP00_11000 343381018abd49c88931a40efcd07795 102 Gene3D G3DSA:3.40.30.10 2 100 4.3E-14 T 13-10-2018 COP00_11000 343381018abd49c88931a40efcd07795 102 Pfam PF00085 Thioredoxin 10 97 3.6E-11 T 13-10-2018 IPR013766 Thioredoxin domain GO:0045454 COP00_14640 09ce96c2ec7a7ff86a3a0b0ae6e9df0f 219 SUPERFAMILY SSF52266 5 215 4.16E-51 T 13-10-2018 COP00_14640 09ce96c2ec7a7ff86a3a0b0ae6e9df0f 219 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 9 185 7.1E-16 T 13-10-2018 IPR013830 SGNH hydrolase-type esterase domain COP00_14640 09ce96c2ec7a7ff86a3a0b0ae6e9df0f 219 Gene3D G3DSA:3.40.50.1110 5 219 8.8E-67 T 13-10-2018 IPR036514 SGNH hydrolase superfamily COP00_13440 c08fb8457db5255308fd3a3cf7941553 572 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 395 541 4.0E-44 T 13-10-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 COP00_13440 c08fb8457db5255308fd3a3cf7941553 572 Gene3D G3DSA:3.40.50.970 370 569 3.5E-62 T 13-10-2018 COP00_13440 c08fb8457db5255308fd3a3cf7941553 572 SUPERFAMILY SSF52467 193 358 5.54E-33 T 13-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily COP00_13440 c08fb8457db5255308fd3a3cf7941553 572 SUPERFAMILY SSF52518 13 183 2.49E-50 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold COP00_13440 c08fb8457db5255308fd3a3cf7941553 572 Gene3D G3DSA:3.40.50.1220 191 369 4.3E-35 T 13-10-2018 COP00_13440 c08fb8457db5255308fd3a3cf7941553 572 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 432 451 - T 13-10-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 COP00_13440 c08fb8457db5255308fd3a3cf7941553 572 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 199 333 1.2E-25 T 13-10-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 COP00_13440 c08fb8457db5255308fd3a3cf7941553 572 Gene3D G3DSA:3.40.50.970 2 189 2.4E-67 T 13-10-2018 COP00_13440 c08fb8457db5255308fd3a3cf7941553 572 TIGRFAM TIGR02418 acolac_catab: acetolactate synthase, catabolic 15 552 4.2E-269 T 13-10-2018 IPR012782 Acetolactate synthase, catabolic GO:0000287|GO:0003984|GO:0030976|GO:0034077 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 COP00_13440 c08fb8457db5255308fd3a3cf7941553 572 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 14 180 1.3E-52 T 13-10-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 COP00_13440 c08fb8457db5255308fd3a3cf7941553 572 SUPERFAMILY SSF52518 372 551 2.95E-59 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold COP00_22480 d4cdb04348919a713585c89fa1a33147 1130 Pfam PF13558 Putative exonuclease SbcCD, C subunit 1002 1085 2.2E-15 T 13-10-2018 COP00_22480 d4cdb04348919a713585c89fa1a33147 1130 Pfam PF13476 AAA domain 5 231 8.3E-14 T 13-10-2018 IPR038729 Rad50/SbcC-type AAA domain COP00_22480 d4cdb04348919a713585c89fa1a33147 1130 Gene3D G3DSA:3.40.50.300 1 269 1.3E-41 T 13-10-2018 COP00_22480 d4cdb04348919a713585c89fa1a33147 1130 Gene3D G3DSA:3.40.50.300 848 1121 2.2E-27 T 13-10-2018 COP00_22480 d4cdb04348919a713585c89fa1a33147 1130 SUPERFAMILY SSF52540 28 1113 1.22E-26 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_18455 277c4217de9cda2b31d6366c61beb451 92 ProDom PD063106 YXIC 1 90 2.0E-32 T 13-10-2018 IPR020315 Uncharacterised protein family YxiC COP00_18455 277c4217de9cda2b31d6366c61beb451 92 Pfam PF17279 Family of unknown function (DUF5344) 2 88 1.1E-29 T 13-10-2018 COP00_17990 77549b3852b2676198091805b58ed6da 200 Pfam PF02342 TerD domain 2 199 3.6E-75 T 13-10-2018 IPR003325 TerD domain COP00_17990 77549b3852b2676198091805b58ed6da 200 Gene3D G3DSA:2.60.60.30 19 196 4.7E-63 T 13-10-2018 COP00_04110 423a3c1f47cef5ea5c59f897b48a5a41 325 SUPERFAMILY SSF51556 9 325 4.99E-85 T 13-10-2018 IPR032466 Metal-dependent hydrolase COP00_04110 423a3c1f47cef5ea5c59f897b48a5a41 325 Gene3D G3DSA:3.20.20.140 1 325 6.0E-107 T 13-10-2018 COP00_04110 423a3c1f47cef5ea5c59f897b48a5a41 325 Pfam PF04909 Amidohydrolase 38 325 1.3E-46 T 13-10-2018 IPR006680 Amidohydrolase-related GO:0016787 COP00_12015 7a09e9ef39770f6199a5481a1d520ce0 448 ProSitePatterns PS00218 Amino acid permeases signature. 41 71 - T 13-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 COP00_12015 7a09e9ef39770f6199a5481a1d520ce0 448 Pfam PF00324 Amino acid permease 16 441 3.0E-93 T 13-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 COP00_12015 7a09e9ef39770f6199a5481a1d520ce0 448 Gene3D G3DSA:1.20.1740.10 6 447 4.1E-68 T 13-10-2018 COP00_12015 7a09e9ef39770f6199a5481a1d520ce0 448 PIRSF PIRSF006060 1 447 3.9E-72 T 13-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 COP00_05585 5e40ace74bc0844c976f64c83ba3fb0b 224 PIRSF PIRSF000032 2 224 7.5E-105 T 13-10-2018 COP00_05585 5e40ace74bc0844c976f64c83ba3fb0b 224 Pfam PF00033 Cytochrome b/b6/petB 40 219 3.5E-49 T 13-10-2018 IPR005797 Cytochrome b/b6, N-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 COP00_05585 5e40ace74bc0844c976f64c83ba3fb0b 224 SUPERFAMILY SSF81342 6 224 4.55E-61 T 13-10-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 COP00_05585 5e40ace74bc0844c976f64c83ba3fb0b 224 Gene3D G3DSA:1.20.810.10 1 224 9.3E-90 T 13-10-2018 IPR027387 Cytochrome b/b6-like domain superfamily Reactome: R-HSA-611105 COP00_08405 a1651e2ce98ca5f77e7f2e9d4fd9580d 147 Gene3D G3DSA:3.30.70.260 69 144 2.0E-7 T 13-10-2018 COP00_08405 a1651e2ce98ca5f77e7f2e9d4fd9580d 147 SUPERFAMILY SSF55021 70 143 2.44E-11 T 13-10-2018 COP00_08405 a1651e2ce98ca5f77e7f2e9d4fd9580d 147 PIRSF PIRSF025624 1 146 4.0E-62 T 13-10-2018 IPR008310 UPF0735 ACT domain-containing protein COP00_08405 a1651e2ce98ca5f77e7f2e9d4fd9580d 147 Pfam PF01842 ACT domain 70 120 6.1E-8 T 13-10-2018 IPR002912 ACT domain COP00_08405 a1651e2ce98ca5f77e7f2e9d4fd9580d 147 Hamap MF_00707 UPF0735 ACT domain-containing protein . 2 146 31.953 T 13-10-2018 IPR008310 UPF0735 ACT domain-containing protein COP00_01835 4879ca255b0b742b455ae86d455d21ca 154 Pfam PF14568 SMI1-KNR4 cell-wall 18 144 3.3E-22 T 13-10-2018 COP00_01835 4879ca255b0b742b455ae86d455d21ca 154 Gene3D G3DSA:3.40.1580.10 2 151 2.9E-28 T 13-10-2018 IPR037883 Knr4/Smi1-like domain superfamily COP00_01835 4879ca255b0b742b455ae86d455d21ca 154 SUPERFAMILY SSF160631 8 148 1.01E-22 T 13-10-2018 COP00_01835 4879ca255b0b742b455ae86d455d21ca 154 SMART SM00860 14 146 2.6E-8 T 13-10-2018 IPR018958 Knr4/Smi1-like domain COP00_17820 0eaf99624386e3ea0edc24bd799c9f04 256 Pfam PF12730 ABC-2 family transporter protein 8 155 2.1E-6 T 13-10-2018 IPR032688 ABC-2 family transporter protein GO:0055085 COP00_17820 0eaf99624386e3ea0edc24bd799c9f04 256 TIGRFAM TIGR03733 lanti_perm_MutG: lantibiotic protection ABC transporter permease subunit, MutG family 6 253 1.6E-89 T 13-10-2018 IPR022294 Lantibiotic protection ABC transporter permease subunit, MutG family COP00_24230 d0e54af5dd29f2932786685d3becb4d1 144 Gene3D G3DSA:1.10.10.10 43 137 7.1E-6 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_24230 d0e54af5dd29f2932786685d3becb4d1 144 Pfam PF13730 Helix-turn-helix domain 53 96 3.3E-7 T 13-10-2018 COP00_23975 087049e323a57898bb9c9cdf57e563bb 156 SUPERFAMILY SSF53927 2 143 1.61E-47 T 13-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 COP00_23975 087049e323a57898bb9c9cdf57e563bb 156 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 53 90 - T 13-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 COP00_23975 087049e323a57898bb9c9cdf57e563bb 156 Gene3D G3DSA:3.40.140.10 1 156 6.8E-67 T 13-10-2018 COP00_23975 087049e323a57898bb9c9cdf57e563bb 156 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 2 101 8.7E-27 T 13-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain COP00_18270 8d039e87bd035a4ece0a7f0063e94e6c 271 SUPERFAMILY SSF161098 12 265 2.75E-55 T 13-10-2018 IPR035906 MetI-like superfamily COP00_18270 8d039e87bd035a4ece0a7f0063e94e6c 271 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 94 261 9.4E-15 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 COP00_18270 8d039e87bd035a4ece0a7f0063e94e6c 271 Gene3D G3DSA:1.10.3720.10 14 270 1.2E-54 T 13-10-2018 IPR035906 MetI-like superfamily COP00_04010 edbc099a94b8a18ec8102a4f8f3cf601 185 Pfam PF07563 Protein of unknown function (DUF1541) 63 114 4.5E-26 T 13-10-2018 IPR011438 Domain of unknown function DUF1541 COP00_04010 edbc099a94b8a18ec8102a4f8f3cf601 185 Pfam PF07563 Protein of unknown function (DUF1541) 127 178 5.6E-27 T 13-10-2018 IPR011438 Domain of unknown function DUF1541 COP00_04010 edbc099a94b8a18ec8102a4f8f3cf601 185 Gene3D G3DSA:2.30.30.1210 38 183 1.2E-66 T 13-10-2018 COP00_14660 fc76b0d270fdc2188f8ba10e19199bd5 258 Pfam PF12679 ABC-2 family transporter protein 6 211 3.9E-8 T 13-10-2018 IPR032688 ABC-2 family transporter protein GO:0055085 COP00_22880 703f8edac2ffbacb22585a2dff93272f 220 Pfam PF03741 Integral membrane protein TerC family 11 180 1.1E-44 T 13-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 COP00_22880 703f8edac2ffbacb22585a2dff93272f 220 TIGRFAM TIGR03717 R_switched_YjbE: integral membrane protein, YjbE family 10 180 5.7E-69 T 13-10-2018 IPR022301 Integral membrane protein YjbE COP00_10075 0d02d1b5216fe8a6757690a74e0e92be 194 TIGRFAM TIGR02357 ECF_ThiT_YuaJ: energy-coupled thiamine transporter ThiT 8 187 4.6E-60 T 13-10-2018 IPR012651 Thiamine transporter ThiT GO:0005886|GO:0015234|GO:0015888 COP00_10075 0d02d1b5216fe8a6757690a74e0e92be 194 Pfam PF09515 Thiamine transporter protein (Thia_YuaJ) 10 187 3.6E-61 T 13-10-2018 IPR012651 Thiamine transporter ThiT GO:0005886|GO:0015234|GO:0015888 COP00_10075 0d02d1b5216fe8a6757690a74e0e92be 194 Gene3D G3DSA:1.10.1760.20 4 189 2.1E-59 T 13-10-2018 COP00_10305 f17d8cbe0d7b68b57a7265f72c05c347 134 SUPERFAMILY SSF160755 1 132 4.97E-37 T 13-10-2018 IPR036491 YugN-like superfamily COP00_10305 f17d8cbe0d7b68b57a7265f72c05c347 134 Pfam PF08868 YugN-like family 4 132 2.8E-54 T 13-10-2018 IPR014967 Uncharacterised protein family, YugN-like COP00_10305 f17d8cbe0d7b68b57a7265f72c05c347 134 Gene3D G3DSA:3.30.310.100 4 130 1.1E-28 T 13-10-2018 IPR036491 YugN-like superfamily COP00_10800 8905e7fb6793dddc5634ca804a1a6a5f 91 PIRSF PIRSF012565 1 91 1.1E-49 T 13-10-2018 IPR009370 Protein of unknown function DUF1027 COP00_10800 8905e7fb6793dddc5634ca804a1a6a5f 91 Pfam PF06265 Protein of unknown function (DUF1027) 4 87 6.1E-39 T 13-10-2018 IPR009370 Protein of unknown function DUF1027 COP00_10800 8905e7fb6793dddc5634ca804a1a6a5f 91 Gene3D G3DSA:3.50.4.20 1 91 2.4E-43 T 13-10-2018 IPR038141 YutD-like superfamily COP00_10435 a2ff45cb5cd3afd3d08c3aa7bcd6057e 262 Pfam PF02666 Phosphatidylserine decarboxylase 59 256 5.2E-52 T 13-10-2018 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 COP00_10435 a2ff45cb5cd3afd3d08c3aa7bcd6057e 262 TIGRFAM TIGR00163 PS_decarb: phosphatidylserine decarboxylase 51 256 8.8E-49 T 13-10-2018 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 COP00_19270 06175e04041a8256d3c974344166479a 441 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 14 421 3.1E-161 T 13-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 COP00_19270 06175e04041a8256d3c974344166479a 441 Pfam PF05525 Branched-chain amino acid transport protein 10 433 7.6E-165 T 13-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 COP00_21430 e195092162c0ac6e733ba980751a4c84 296 Gene3D G3DSA:1.10.10.1150 8 93 1.5E-6 T 13-10-2018 COP00_21430 e195092162c0ac6e733ba980751a4c84 296 Pfam PF05402 Coenzyme PQQ synthesis protein D (PqqD) 20 92 5.0E-10 T 13-10-2018 IPR008792 Coenzyme PQQ synthesis D COP00_21460 bf125f99c32647e8f2fc7f172f70b745 301 SUPERFAMILY SSF54001 151 257 7.85E-6 T 13-10-2018 IPR038765 Papain-like cysteine peptidase superfamily COP00_21460 bf125f99c32647e8f2fc7f172f70b745 301 Gene3D G3DSA:3.90.1720.10 115 277 2.2E-5 T 13-10-2018 COP00_21460 bf125f99c32647e8f2fc7f172f70b745 301 Pfam PF12671 Putative amidase domain 139 288 1.9E-37 T 13-10-2018 IPR024301 Putative amidase domain COP00_17720 33b92753a98a962f5b4803cd78019067 511 Pfam PF08666 SAF domain 31 90 4.7E-9 T 13-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 COP00_17720 33b92753a98a962f5b4803cd78019067 511 SMART SM00858 20 90 6.0E-10 T 13-10-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 COP00_17720 33b92753a98a962f5b4803cd78019067 511 TIGRFAM TIGR03248 galactar-dH20: galactarate dehydratase 13 511 1.5E-278 T 13-10-2018 IPR017654 Galactarate dehydratase GarD-like GO:0008867|GO:0046392 KEGG: 00053+4.2.1.42|MetaCyc: PWY-6497 COP00_17720 33b92753a98a962f5b4803cd78019067 511 Gene3D G3DSA:3.90.1210.30 12 89 2.4E-24 T 13-10-2018 COP00_17720 33b92753a98a962f5b4803cd78019067 511 Pfam PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus 117 509 1.5E-146 T 13-10-2018 IPR007392 D-galactarate/Altronate dehydratase, C-terminal GO:0016829 COP00_07080 5985e316def0920c69b08b0f314fc69a 194 Gene3D G3DSA:3.40.50.1000 1 164 1.2E-10 T 13-10-2018 IPR023214 HAD superfamily COP00_07080 5985e316def0920c69b08b0f314fc69a 194 SUPERFAMILY SSF56784 4 162 2.82E-20 T 13-10-2018 IPR036412 HAD-like superfamily COP00_07080 5985e316def0920c69b08b0f314fc69a 194 PIRSF PIRSF021362 1 191 4.1E-78 T 13-10-2018 IPR009206 Nucleotidase, putative COP00_07080 5985e316def0920c69b08b0f314fc69a 194 Pfam PF06941 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C) 4 181 1.2E-11 T 13-10-2018 IPR010708 5'(3')-deoxyribonucleotidase GO:0008253|GO:0009264 Reactome: R-HSA-73621 COP00_08910 dea2a384a86c8f31e6623d3644ec19e6 314 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 108 301 2.8E-15 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 COP00_08910 dea2a384a86c8f31e6623d3644ec19e6 314 SUPERFAMILY SSF161098 76 301 1.83E-50 T 13-10-2018 IPR035906 MetI-like superfamily COP00_08910 dea2a384a86c8f31e6623d3644ec19e6 314 Gene3D G3DSA:1.10.3720.10 68 312 4.3E-59 T 13-10-2018 IPR035906 MetI-like superfamily COP00_07580 e779f6d5256887f74026c1435e717b7f 83 Gene3D G3DSA:3.30.43.20 56 70 2.0E-20 T 13-10-2018 COP00_07580 e779f6d5256887f74026c1435e717b7f 83 SUPERFAMILY SSF48264 1 69 3.27E-16 T 13-10-2018 IPR036396 Cytochrome P450 superfamily GO:0005506|GO:0016705|GO:0020037|GO:0055114 COP00_07580 e779f6d5256887f74026c1435e717b7f 83 Gene3D G3DSA:1.10.630.20 1 55 2.0E-20 T 13-10-2018 COP00_15130 a2a13a069fd2294336f599a3e0c2ac2e 253 SMART SM00382 32 220 9.5E-10 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_15130 a2a13a069fd2294336f599a3e0c2ac2e 253 SUPERFAMILY SSF52540 3 224 1.77E-67 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_15130 a2a13a069fd2294336f599a3e0c2ac2e 253 Gene3D G3DSA:3.40.50.300 1 245 5.3E-66 T 13-10-2018 COP00_15130 a2a13a069fd2294336f599a3e0c2ac2e 253 Pfam PF00005 ABC transporter 23 171 1.3E-31 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 COP00_10840 e0d31ef03990b514ca622009481e4b09 283 Gene3D G3DSA:3.20.20.410 1 282 1.9E-97 T 13-10-2018 IPR036520 UPF0759 superfamily COP00_10840 e0d31ef03990b514ca622009481e4b09 283 SUPERFAMILY SSF117396 2 269 1.44E-85 T 13-10-2018 IPR036520 UPF0759 superfamily COP00_10840 e0d31ef03990b514ca622009481e4b09 283 Pfam PF01904 Protein of unknown function DUF72 16 265 5.2E-60 T 13-10-2018 IPR002763 Protein of unknown function DUF72 COP00_01705 65ac12c427bd0aea387e0cfe6ff3607d 85 Gene3D G3DSA:1.10.760.20 1 82 1.5E-31 T 13-10-2018 IPR038292 YmfJ/YflH superfamily COP00_01705 65ac12c427bd0aea387e0cfe6ff3607d 85 PIRSF PIRSF004764 1 85 3.8E-28 T 13-10-2018 IPR024702 Uncharacterised conserved protein YmfJ COP00_01705 65ac12c427bd0aea387e0cfe6ff3607d 85 Pfam PF11588 Protein of unknown function (DUF3243) 3 80 4.1E-35 T 13-10-2018 IPR021637 Protein of unknown function DUF3243 COP00_04215 fb11bd5708f89255ae54568dcaedcb04 303 SUPERFAMILY SSF51569 2 291 4.03E-70 T 13-10-2018 COP00_04215 fb11bd5708f89255ae54568dcaedcb04 303 Pfam PF00682 HMGL-like 7 279 2.5E-48 T 13-10-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 COP00_04215 fb11bd5708f89255ae54568dcaedcb04 303 Gene3D G3DSA:3.20.20.70 1 301 5.7E-125 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 COP00_14180 484ebb3f08f2f0332825aa95f8f8d92d 373 Pfam PF12698 ABC-2 family transporter protein 18 364 3.3E-31 T 13-10-2018 COP00_07425 bf82b6a26f63f864f4e4197890199273 172 Pfam PF13419 Haloacid dehalogenase-like hydrolase 25 137 2.7E-11 T 13-10-2018 COP00_07425 bf82b6a26f63f864f4e4197890199273 172 SUPERFAMILY SSF56784 17 151 1.29E-25 T 13-10-2018 IPR036412 HAD-like superfamily COP00_07425 bf82b6a26f63f864f4e4197890199273 172 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 29 139 7.8E-24 T 13-10-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 COP00_07425 bf82b6a26f63f864f4e4197890199273 172 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 47 137 1.0E-7 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 COP00_07425 bf82b6a26f63f864f4e4197890199273 172 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 61 129 6.3E-7 T 13-10-2018 IPR006439 HAD hydrolase, subfamily IA GO:0016787 COP00_07425 bf82b6a26f63f864f4e4197890199273 172 Gene3D G3DSA:3.40.50.1000 17 155 1.7E-23 T 13-10-2018 IPR023214 HAD superfamily COP00_07425 bf82b6a26f63f864f4e4197890199273 172 TIGRFAM TIGR01668 YqeG_hyp_ppase: HAD phosphatase, family IIIA 4 169 4.2E-67 T 13-10-2018 IPR010021 HAD-superfamily phosphatase, YqeG-like COP00_02070 8ecb69cf91d8aa5cb0afeaee68e73a3d 120 Pfam PF00893 Small Multidrug Resistance protein 5 94 6.5E-26 T 13-10-2018 IPR000390 Small multidrug resistance protein family GO:0016021 COP00_02070 8ecb69cf91d8aa5cb0afeaee68e73a3d 120 Gene3D G3DSA:1.10.3730.20 1 109 4.6E-33 T 13-10-2018 COP00_02070 8ecb69cf91d8aa5cb0afeaee68e73a3d 120 SUPERFAMILY SSF103481 6 106 1.23E-19 T 13-10-2018 COP00_18800 da6efec70a65e8d8ca775b5c292e1631 269 Hamap MF_02077 Lipid II flippase Amj [amj]. 5 267 26.695 T 13-10-2018 IPR021260 Lipid II flippase Amj COP00_18800 da6efec70a65e8d8ca775b5c292e1631 269 Pfam PF10997 Alternate to MurJ 15 265 6.5E-97 T 13-10-2018 IPR021260 Lipid II flippase Amj COP00_21925 67ec84a8488a9d381c98aabe3c44bc8c 299 Gene3D G3DSA:3.20.20.370 66 297 5.4E-56 T 13-10-2018 COP00_21925 67ec84a8488a9d381c98aabe3c44bc8c 299 SUPERFAMILY SSF88713 99 294 7.17E-48 T 13-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 COP00_21925 67ec84a8488a9d381c98aabe3c44bc8c 299 Pfam PF01522 Polysaccharide deacetylase 97 219 3.7E-26 T 13-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 COP00_21120 cc47ad34e04a2b0563a09f41f691a8df 104 Pfam PF08838 Protein of unknown function (DUF1811) 3 101 1.1E-43 T 13-10-2018 IPR014938 Protein of unknown function DUF1811 COP00_21120 cc47ad34e04a2b0563a09f41f691a8df 104 SUPERFAMILY SSF101697 1 103 1.44E-48 T 13-10-2018 IPR036289 Hypothetical protein YfhH COP00_21120 cc47ad34e04a2b0563a09f41f691a8df 104 Gene3D G3DSA:1.10.287.880 1 50 6.2E-26 T 13-10-2018 COP00_21120 cc47ad34e04a2b0563a09f41f691a8df 104 Gene3D G3DSA:2.30.30.340 51 104 1.6E-25 T 13-10-2018 COP00_00165 5e8f56b456c751f9c4931e6d099e3fee 165 ProSitePatterns PS00194 Thioredoxin family active site. 56 74 - T 13-10-2018 IPR017937 Thioredoxin, conserved site GO:0045454 COP00_00165 5e8f56b456c751f9c4931e6d099e3fee 165 Pfam PF00578 AhpC/TSA family 51 145 2.2E-21 T 13-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 COP00_00165 5e8f56b456c751f9c4931e6d099e3fee 165 SUPERFAMILY SSF52833 51 163 2.31E-29 T 13-10-2018 IPR036249 Thioredoxin-like superfamily COP00_00165 5e8f56b456c751f9c4931e6d099e3fee 165 Gene3D G3DSA:3.40.30.10 23 162 3.7E-35 T 13-10-2018 COP00_17420 b24a6638feeb2adc3980557f9cc1c89e 398 SUPERFAMILY SSF103473 3 390 9.29E-34 T 13-10-2018 IPR036259 MFS transporter superfamily COP00_17420 b24a6638feeb2adc3980557f9cc1c89e 398 Pfam PF07690 Major Facilitator Superfamily 9 316 4.5E-14 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 COP00_17420 b24a6638feeb2adc3980557f9cc1c89e 398 Gene3D G3DSA:1.20.1250.20 2 388 6.3E-31 T 13-10-2018 COP00_09350 a8d814098ab3dabc527a8117bc0dca03 224 SUPERFAMILY SSF103088 105 222 4.32E-30 T 13-10-2018 IPR036737 OmpA-like domain superfamily COP00_09350 a8d814098ab3dabc527a8117bc0dca03 224 Gene3D G3DSA:3.30.1330.60 65 224 5.9E-46 T 13-10-2018 IPR036737 OmpA-like domain superfamily COP00_09350 a8d814098ab3dabc527a8117bc0dca03 224 Pfam PF00691 OmpA family 117 216 3.8E-19 T 13-10-2018 IPR006665 OmpA-like domain COP00_09350 a8d814098ab3dabc527a8117bc0dca03 224 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 8 57 1.9E-18 T 13-10-2018 IPR025713 Motility protein B, N-terminal domain COP00_10935 9f3defb2070670f7a949545cd3d7ae64 57 Gene3D G3DSA:3.40.630.30 11 55 8.4E-10 T 13-10-2018 COP00_10935 9f3defb2070670f7a949545cd3d7ae64 57 SUPERFAMILY SSF55729 14 54 2.0E-9 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase COP00_10935 9f3defb2070670f7a949545cd3d7ae64 57 Pfam PF00583 Acetyltransferase (GNAT) family 13 54 2.6E-5 T 13-10-2018 IPR000182 GNAT domain COP00_14280 1a422cbeba59c516582c94bd02b42d14 389 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 338 362 - T 13-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 COP00_14280 1a422cbeba59c516582c94bd02b42d14 389 Pfam PF01098 Cell cycle protein 12 379 1.1E-97 T 13-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 COP00_16525 503fbb9bbd64a26ef8e923079d453964 185 PIRSF PIRSF015034 1 183 2.4E-72 T 13-10-2018 IPR025542 YacH protein COP00_16525 503fbb9bbd64a26ef8e923079d453964 185 SUPERFAMILY SSF46600 140 175 4.32E-7 T 13-10-2018 IPR036876 UVR domain superfamily COP00_16525 503fbb9bbd64a26ef8e923079d453964 185 Pfam PF02151 UvrB/uvrC motif 141 174 3.6E-9 T 13-10-2018 IPR001943 UVR domain GO:0005515 COP00_16525 503fbb9bbd64a26ef8e923079d453964 185 Gene3D G3DSA:4.10.860.10 137 185 1.1E-5 T 13-10-2018 COP00_18995 77f3e7bb972a8e213aaf80f30360ae4b 106 Pfam PF00085 Thioredoxin 4 103 1.0E-19 T 13-10-2018 IPR013766 Thioredoxin domain GO:0045454 COP00_18995 77f3e7bb972a8e213aaf80f30360ae4b 106 Gene3D G3DSA:3.40.30.10 1 106 1.4E-25 T 13-10-2018 COP00_18995 77f3e7bb972a8e213aaf80f30360ae4b 106 SUPERFAMILY SSF52833 3 105 5.95E-27 T 13-10-2018 IPR036249 Thioredoxin-like superfamily COP00_24155 3a0dd126bd2760edd3b1065525c2163f 154 Gene3D G3DSA:3.10.180.10 2 139 2.4E-36 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase COP00_24155 3a0dd126bd2760edd3b1065525c2163f 154 SUPERFAMILY SSF54593 6 133 1.88E-24 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase COP00_24155 3a0dd126bd2760edd3b1065525c2163f 154 Hamap MF_01512 Metallothiol transferase FosB [fosB]. 5 142 41.138 T 13-10-2018 IPR022858 Metallothiol transferase FosB GO:0016765|GO:0046677 COP00_24155 3a0dd126bd2760edd3b1065525c2163f 154 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 8 120 2.5E-12 T 13-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain COP00_03200 db9df97d699afa45f6b6ff4f37265ecc 56 Pfam PF13076 Fur-regulated basic protein A 13 48 2.0E-11 T 13-10-2018 IPR025072 Fur-regulated basic protein A COP00_14295 338fba02e18daec668a0c9a5449a8a9e 86 ProDom PD062384 GERMINATION SPORE TRANSMEMBRANE MEMBRANE MORPHOGENESIS YWCE 1 85 2.0E-38 T 13-10-2018 IPR020185 Spore morphogenesis/germination protein YwcE COP00_14295 338fba02e18daec668a0c9a5449a8a9e 86 Pfam PF17368 Spore morphogenesis and germination protein YwcE 1 84 1.0E-39 T 13-10-2018 IPR020185 Spore morphogenesis/germination protein YwcE COP00_06285 f4b0fa456d03381fe8392077e18e9bd7 69 Pfam PF14164 YqzH-like protein 1 64 4.8E-25 T 13-10-2018 IPR025546 YqzH-like protein COP00_14895 94935833ceb9a912d64ae837d76c5e89 171 ProDom PD033957 LIPOPROTEIN MEMBRANE TRANSMEMBRANE YFJD PALMITATE YFJE PRECURSOR SIGNAL 59 167 5.0E-38 T 13-10-2018 IPR035324 Protein of unknown function DUF5381 COP00_14895 94935833ceb9a912d64ae837d76c5e89 171 Pfam PF17353 Family of unknown function (DUF5381) 1 160 4.8E-61 T 13-10-2018 IPR035324 Protein of unknown function DUF5381 COP00_08840 9f34f52630c74c17ff3db286121f0aab 313 Pfam PF01351 Ribonuclease HII 99 303 2.6E-54 T 13-10-2018 IPR024567 Ribonuclease HII/HIII domain COP00_08840 9f34f52630c74c17ff3db286121f0aab 313 SUPERFAMILY SSF53098 97 308 2.58E-50 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily COP00_08840 9f34f52630c74c17ff3db286121f0aab 313 Gene3D G3DSA:3.30.310.10 1 88 1.8E-25 T 13-10-2018 IPR012295 TBP domain superfamily COP00_08840 9f34f52630c74c17ff3db286121f0aab 313 Gene3D G3DSA:3.30.420.10 96 313 7.3E-79 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 COP00_08840 9f34f52630c74c17ff3db286121f0aab 313 Hamap MF_00053 Ribonuclease HIII [rnhC]. 1 310 35.602 T 13-10-2018 IPR004641 Ribonuclease HIII GO:0004523|GO:0005737|GO:0016070 COP00_08840 9f34f52630c74c17ff3db286121f0aab 313 PIRSF PIRSF037748 1 311 2.9E-118 T 13-10-2018 IPR004641 Ribonuclease HIII GO:0004523|GO:0005737|GO:0016070 COP00_08840 9f34f52630c74c17ff3db286121f0aab 313 Pfam PF11858 Domain of unknown function (DUF3378) 3 77 5.2E-26 T 13-10-2018 IPR024568 Ribonuclease HIII, N-terminal COP00_08840 9f34f52630c74c17ff3db286121f0aab 313 TIGRFAM TIGR00716 rnhC: ribonuclease HIII 5 302 2.0E-112 T 13-10-2018 IPR004641 Ribonuclease HIII GO:0004523|GO:0005737|GO:0016070 COP00_05850 c3ac58b26f717e9984af954033ff7b65 194 PIRSF PIRSF037778 2 189 1.7E-45 T 13-10-2018 IPR025720 ECF transporter, Riboflavin transporter RibU GO:0005886|GO:0032217|GO:0032218 COP00_05850 c3ac58b26f717e9984af954033ff7b65 194 Gene3D G3DSA:1.10.1760.20 3 192 9.4E-49 T 13-10-2018 COP00_05850 c3ac58b26f717e9984af954033ff7b65 194 Pfam PF12822 ECF transporter, substrate-specific component 7 176 2.7E-23 T 13-10-2018 IPR024529 ECF transporter, substrate-specific component GO:0005215 COP00_03400 cd8a92eb52169669f5016cc26c79b4e3 419 SUPERFAMILY SSF103473 23 401 1.26E-29 T 13-10-2018 IPR036259 MFS transporter superfamily COP00_03400 cd8a92eb52169669f5016cc26c79b4e3 419 Pfam PF07690 Major Facilitator Superfamily 16 364 1.1E-14 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 COP00_03400 cd8a92eb52169669f5016cc26c79b4e3 419 Gene3D G3DSA:1.20.1250.20 13 400 4.0E-20 T 13-10-2018 COP00_21865 141514cc75567ebfae6d09147cf764cd 132 SUPERFAMILY SSF88659 65 122 9.16E-6 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like COP00_14860 8bdad2c62a294a2ab903086d31d7d660 89 Pfam PF05901 Excalibur calcium-binding domain 34 88 4.4E-15 T 13-10-2018 IPR008613 Excalibur calcium-binding domain COP00_14860 8bdad2c62a294a2ab903086d31d7d660 89 SMART SM00894 33 88 1.6E-8 T 13-10-2018 IPR008613 Excalibur calcium-binding domain COP00_15275 f73782850f6338a88159c426bad2163f 432 Gene3D G3DSA:1.20.1250.20 200 417 8.9E-23 T 13-10-2018 COP00_15275 f73782850f6338a88159c426bad2163f 432 ProSitePatterns PS00216 Sugar transport proteins signature 1. 70 86 - T 13-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 COP00_15275 f73782850f6338a88159c426bad2163f 432 Pfam PF07690 Major Facilitator Superfamily 34 362 1.9E-30 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 COP00_15275 f73782850f6338a88159c426bad2163f 432 SUPERFAMILY SSF103473 13 414 2.35E-54 T 13-10-2018 IPR036259 MFS transporter superfamily COP00_15275 f73782850f6338a88159c426bad2163f 432 ProSitePatterns PS00217 Sugar transport proteins signature 2. 112 137 - T 13-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 COP00_15275 f73782850f6338a88159c426bad2163f 432 Gene3D G3DSA:1.20.1250.20 40 199 4.4E-24 T 13-10-2018 COP00_17135 783e4c64afb64eb612c1d1917b4080f9 312 ProSitePatterns PS00211 ABC transporters family signature. 136 150 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 COP00_17135 783e4c64afb64eb612c1d1917b4080f9 312 SUPERFAMILY SSF52540 3 233 1.52E-65 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_17135 783e4c64afb64eb612c1d1917b4080f9 312 Gene3D G3DSA:3.40.50.300 1 243 2.5E-73 T 13-10-2018 COP00_17135 783e4c64afb64eb612c1d1917b4080f9 312 Pfam PF00005 ABC transporter 21 163 3.7E-33 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 COP00_17135 783e4c64afb64eb612c1d1917b4080f9 312 SMART SM00382 29 212 1.0E-9 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_07595 7c6df7332187ecd396f56fbfbc2f7346 185 SUPERFAMILY SSF53697 4 184 9.51E-38 T 13-10-2018 COP00_07595 7c6df7332187ecd396f56fbfbc2f7346 185 TIGRFAM TIGR03127 RuMP_HxlB: 6-phospho 3-hexuloisomerase 8 185 1.7E-69 T 13-10-2018 IPR017552 3-hexulose-6-phosphate isomerase GO:0016853 COP00_07595 7c6df7332187ecd396f56fbfbc2f7346 185 Gene3D G3DSA:3.40.50.10490 1 185 8.2E-54 T 13-10-2018 COP00_07595 7c6df7332187ecd396f56fbfbc2f7346 185 Pfam PF01380 SIS domain 33 139 1.9E-15 T 13-10-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 COP00_12010 fe7b68a5763df94927a6d80d16d5a8d4 334 Pfam PF00296 Luciferase-like monooxygenase 27 303 9.8E-39 T 13-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 COP00_12010 fe7b68a5763df94927a6d80d16d5a8d4 334 SUPERFAMILY SSF51679 10 330 2.47E-84 T 13-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 COP00_12010 fe7b68a5763df94927a6d80d16d5a8d4 334 TIGRFAM TIGR03558 oxido_grp_1: luciferase family oxidoreductase, group 1 12 330 1.8E-133 T 13-10-2018 IPR019949 Luciferase family oxidoreductase, group 1 COP00_12010 fe7b68a5763df94927a6d80d16d5a8d4 334 Gene3D G3DSA:3.20.20.30 5 334 2.4E-98 T 13-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 COP00_22415 51057116e0fb8ce599eccc8cb18946cb 87 PIRSF PIRSF010606 1 87 3.6E-40 T 13-10-2018 IPR016571 Spore coat assembly protein CotJB COP00_22415 51057116e0fb8ce599eccc8cb18946cb 87 Pfam PF12652 CotJB protein 11 86 2.6E-28 T 13-10-2018 IPR024207 Spore coat assembly protein CotJB, domain COP00_14520 7d03f5222dc40040e568e6b9df2dbe72 187 PRINTS PR01398 Isochorismatase signature 162 179 3.8E-5 T 13-10-2018 IPR016291 Isochorismatase GO:0008908 COP00_14520 7d03f5222dc40040e568e6b9df2dbe72 187 PRINTS PR01398 Isochorismatase signature 144 162 3.8E-5 T 13-10-2018 IPR016291 Isochorismatase GO:0008908 COP00_14520 7d03f5222dc40040e568e6b9df2dbe72 187 PRINTS PR01398 Isochorismatase signature 88 110 3.8E-5 T 13-10-2018 IPR016291 Isochorismatase GO:0008908 COP00_14520 7d03f5222dc40040e568e6b9df2dbe72 187 Pfam PF00857 Isochorismatase family 11 181 7.4E-40 T 13-10-2018 IPR000868 Isochorismatase-like GO:0003824 COP00_14520 7d03f5222dc40040e568e6b9df2dbe72 187 Gene3D G3DSA:3.40.50.850 1 183 2.1E-49 T 13-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 COP00_14520 7d03f5222dc40040e568e6b9df2dbe72 187 SUPERFAMILY SSF52499 4 186 7.46E-52 T 13-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 COP00_07590 fa3270b49dd9a7d9b0a03709854e2248 341 Pfam PF02698 DUF218 domain 167 314 4.3E-33 T 13-10-2018 IPR003848 Domain of unknown function DUF218 COP00_12335 95bcf4b569806dcb1d7f8fd119056bef 508 Gene3D G3DSA:2.40.10.280 20 83 1.8E-7 T 13-10-2018 COP00_12335 95bcf4b569806dcb1d7f8fd119056bef 508 Pfam PF06605 Prophage endopeptidase tail 29 328 8.5E-68 T 13-10-2018 IPR010572 Prophage tail endopeptidase COP00_12335 95bcf4b569806dcb1d7f8fd119056bef 508 Gene3D G3DSA:3.55.50.40 85 172 5.4E-12 T 13-10-2018 COP00_20490 bc3f901afe93d1450035e684a85c9bef 283 SMART SM00283 99 280 1.2E-4 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 COP00_20490 bc3f901afe93d1450035e684a85c9bef 283 SUPERFAMILY SSF58104 113 278 4.97E-42 T 13-10-2018 COP00_20490 bc3f901afe93d1450035e684a85c9bef 283 SUPERFAMILY SSF103190 52 118 2.39E-6 T 13-10-2018 IPR029151 Periplasmic sensor-like domain superfamily COP00_20490 bc3f901afe93d1450035e684a85c9bef 283 Gene3D G3DSA:1.10.287.950 109 279 2.3E-38 T 13-10-2018 COP00_20490 bc3f901afe93d1450035e684a85c9bef 283 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 150 276 3.6E-29 T 13-10-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0007165|GO:0016020 COP00_00970 292401cb1d3aa354f4ddc04e0ec734db 121 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 70 94 - T 13-10-2018 IPR020458 Zinc finger, DksA/TraR C4-type conserved site COP00_00970 292401cb1d3aa354f4ddc04e0ec734db 121 Gene3D G3DSA:1.20.120.910 1 93 1.2E-13 T 13-10-2018 COP00_00970 292401cb1d3aa354f4ddc04e0ec734db 121 PIRSF PIRSF026544 1 121 2.0E-61 T 13-10-2018 IPR016841 Transcription regulator DksA-related, predicted COP00_10470 0c755180e05935cf48e5e06c08b9bc4a 158 PIRSF PIRSF019239 1 158 7.5E-47 T 13-10-2018 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 COP00_10470 0c755180e05935cf48e5e06c08b9bc4a 158 Pfam PF01899 Na+/H+ ion antiporter subunit 8 156 1.6E-43 T 13-10-2018 IPR002758 Na+/H+ antiporter subunit E GO:0006812|GO:0008324|GO:0016021 COP00_00645 6eece58f0071ba0380aa5f8ead4893ad 204 Pfam PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) 24 155 7.8E-17 T 13-10-2018 IPR019076 Sporulation lipoprotein YhcN/YlaJ-like COP00_00645 6eece58f0071ba0380aa5f8ead4893ad 204 TIGRFAM TIGR02898 spore_YhcN_YlaJ: sporulation lipoprotein, YhcN/YlaJ family 5 157 3.3E-40 T 13-10-2018 IPR014247 Sporulation lipoprotein YhcN/YlaJ GO:0030435 COP00_09470 24e05a354825328a5671f018dd98e9d1 309 SUPERFAMILY SSF53686 2 307 3.54E-97 T 13-10-2018 IPR036052 Tryptophan synthase beta subunit-like PLP-dependent enzyme COP00_09470 24e05a354825328a5671f018dd98e9d1 309 TIGRFAM TIGR01139 cysK: cysteine synthase A 8 307 5.4E-134 T 13-10-2018 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 COP00_09470 24e05a354825328a5671f018dd98e9d1 309 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 8 293 8.4E-70 T 13-10-2018 IPR001926 Pyridoxal-phosphate dependent enzyme COP00_09470 24e05a354825328a5671f018dd98e9d1 309 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 33 51 - T 13-10-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 COP00_09470 24e05a354825328a5671f018dd98e9d1 309 TIGRFAM TIGR01136 cysKM: cysteine synthase 7 307 6.0E-126 T 13-10-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 COP00_09470 24e05a354825328a5671f018dd98e9d1 309 Gene3D G3DSA:3.40.50.1100 45 144 5.8E-118 T 13-10-2018 COP00_09470 24e05a354825328a5671f018dd98e9d1 309 Gene3D G3DSA:3.40.50.1100 6 303 5.8E-118 T 13-10-2018 COP00_00550 5da3d0471f16a0f20adc672a7ab48678 371 SUPERFAMILY SSF52518 11 365 6.08E-102 T 13-10-2018 IPR029061 Thiamin diphosphate-binding fold COP00_00550 5da3d0471f16a0f20adc672a7ab48678 371 Gene3D G3DSA:3.40.50.970 5 371 1.4E-123 T 13-10-2018 COP00_00550 5da3d0471f16a0f20adc672a7ab48678 371 Pfam PF00676 Dehydrogenase E1 component 53 343 3.9E-104 T 13-10-2018 IPR001017 Dehydrogenase, E1 component GO:0016624 Reactome: R-HSA-389661 COP00_00550 5da3d0471f16a0f20adc672a7ab48678 371 TIGRFAM TIGR03181 PDH_E1_alph_x: pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit 24 364 1.1E-143 T 13-10-2018 IPR017596 Pyruvate dehydrogenase E1 component subunit alpha/BCKADH E1-alpha KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 COP00_13565 8564692b816a159cdab7ee11238ff691 91 ProSitePatterns PS00894 DeoR-type HTH domain signature. 8 41 - T 13-10-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 COP00_13565 8564692b816a159cdab7ee11238ff691 91 Pfam PF12116 Stage III sporulation protein D 2 82 4.8E-41 T 13-10-2018 IPR014208 Sporulation stage III, transcriptional regulator SpoIIID COP00_13565 8564692b816a159cdab7ee11238ff691 91 TIGRFAM TIGR02844 spore_III_D: sporulation transcriptional regulator SpoIIID 2 81 2.4E-46 T 13-10-2018 IPR014208 Sporulation stage III, transcriptional regulator SpoIIID COP00_13565 8564692b816a159cdab7ee11238ff691 91 Gene3D G3DSA:1.10.10.60 1 91 5.5E-44 T 13-10-2018 COP00_06905 7d56c91e88cb275d507d53883d7af166 118 Gene3D G3DSA:2.60.40.2980 1 118 4.3E-43 T 13-10-2018 COP00_04885 d5c973e3563d7d8355feee2a00fc652e 630 SUPERFAMILY SSF48239 306 621 1.65E-85 T 13-10-2018 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid COP00_04885 d5c973e3563d7d8355feee2a00fc652e 630 TIGRFAM TIGR01787 squalene_cyclas: squalene/oxidosqualene cyclases 15 620 5.9E-113 T 13-10-2018 IPR018333 Squalene cyclase GO:0016866 Reactome: R-HSA-191273|Reactome: R-HSA-2426168 COP00_04885 d5c973e3563d7d8355feee2a00fc652e 630 Pfam PF13249 Squalene-hopene cyclase N-terminal domain 15 293 3.4E-58 T 13-10-2018 IPR032697 Squalene cyclase, N-terminal Reactome: R-HSA-191273|Reactome: R-HSA-2426168 COP00_04885 d5c973e3563d7d8355feee2a00fc652e 630 Pfam PF13243 Squalene-hopene cyclase C-terminal domain 310 619 1.1E-88 T 13-10-2018 IPR032696 Squalene cyclase, C-terminal Reactome: R-HSA-191273|Reactome: R-HSA-2426168 COP00_04885 d5c973e3563d7d8355feee2a00fc652e 630 Gene3D G3DSA:1.50.10.20 33 308 3.8E-186 T 13-10-2018 COP00_04885 d5c973e3563d7d8355feee2a00fc652e 630 Gene3D G3DSA:1.50.10.20 16 619 3.8E-186 T 13-10-2018 COP00_04885 d5c973e3563d7d8355feee2a00fc652e 630 SUPERFAMILY SSF48239 35 294 6.28E-42 T 13-10-2018 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid COP00_04505 e3c53411e56f76e8f21f39991cb73932 95 Pfam PF12674 Putative zinc ribbon domain 5 84 1.2E-29 T 13-10-2018 IPR025868 Putative zinc ribbon domain COP00_23285 2635c611793b73850f9ff7ae07172b00 140 Pfam PF06114 IrrE N-terminal-like domain 24 109 1.7E-14 T 13-10-2018 IPR010359 IrrE N-terminal-like domain COP00_23285 2635c611793b73850f9ff7ae07172b00 140 Gene3D G3DSA:3.40.390.50 4 108 4.6E-7 T 13-10-2018 COP00_21220 94c839c0691e83a835565be82cd56cb6 296 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 18 69 1.6E-10 T 13-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain COP00_21220 94c839c0691e83a835565be82cd56cb6 296 SUPERFAMILY SSF161098 87 274 6.93E-31 T 13-10-2018 IPR035906 MetI-like superfamily COP00_21220 94c839c0691e83a835565be82cd56cb6 296 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 110 293 1.2E-31 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 COP00_21220 94c839c0691e83a835565be82cd56cb6 296 Gene3D G3DSA:1.10.3720.10 81 294 1.4E-24 T 13-10-2018 IPR035906 MetI-like superfamily COP00_16165 85c23a08bfb623fd6108daee5dfc813a 109 Pfam PF06153 Cyclic-di-AMP receptor 1 109 3.1E-54 T 13-10-2018 IPR010375 Cyclic-di-AMP receptor COP00_16165 85c23a08bfb623fd6108daee5dfc813a 109 SUPERFAMILY SSF54913 1 107 2.72E-12 T 13-10-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta COP00_16165 85c23a08bfb623fd6108daee5dfc813a 109 Gene3D G3DSA:3.30.70.120 1 103 1.1E-43 T 13-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal COP00_18740 d5b0b44799cd8c8926f816a4e06146e2 257 Pfam PF07286 Protein of unknown function (DUF1445) 106 248 8.8E-71 T 13-10-2018 IPR009906 D-glutamate cyclase COP00_18740 d5b0b44799cd8c8926f816a4e06146e2 257 Gene3D G3DSA:3.30.2040.10 123 229 2.4E-52 T 13-10-2018 COP00_18740 d5b0b44799cd8c8926f816a4e06146e2 257 SUPERFAMILY SSF160920 1 249 6.54E-119 T 13-10-2018 IPR038021 Putative hydro-lyase COP00_18740 d5b0b44799cd8c8926f816a4e06146e2 257 PIRSF PIRSF029755 1 257 1.1E-130 T 13-10-2018 IPR016938 Uncharacterised protein family UPF0317 COP00_18740 d5b0b44799cd8c8926f816a4e06146e2 257 Hamap MF_01830 Putative hydro-lyase . 2 256 55.922 T 13-10-2018 IPR016938 Uncharacterised protein family UPF0317 COP00_18740 d5b0b44799cd8c8926f816a4e06146e2 257 Gene3D G3DSA:3.40.1640.10 1 122 1.7E-47 T 13-10-2018 COP00_03815 0cecac2a95d50abbecb78de4441034aa 222 SUPERFAMILY SSF51206 3 138 4.32E-36 T 13-10-2018 IPR018490 Cyclic nucleotide-binding-like COP00_03815 0cecac2a95d50abbecb78de4441034aa 222 SMART SM00100 9 127 2.5E-22 T 13-10-2018 IPR000595 Cyclic nucleotide-binding domain COP00_03815 0cecac2a95d50abbecb78de4441034aa 222 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 172 188 4.5E-6 T 13-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 COP00_03815 0cecac2a95d50abbecb78de4441034aa 222 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 188 203 4.5E-6 T 13-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 COP00_03815 0cecac2a95d50abbecb78de4441034aa 222 SUPERFAMILY SSF46785 144 220 2.34E-21 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_03815 0cecac2a95d50abbecb78de4441034aa 222 SMART SM00419 166 214 1.5E-10 T 13-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 COP00_03815 0cecac2a95d50abbecb78de4441034aa 222 Pfam PF13545 Crp-like helix-turn-helix domain 148 218 1.6E-15 T 13-10-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 COP00_03815 0cecac2a95d50abbecb78de4441034aa 222 Pfam PF00027 Cyclic nucleotide-binding domain 28 115 1.1E-20 T 13-10-2018 IPR000595 Cyclic nucleotide-binding domain COP00_03815 0cecac2a95d50abbecb78de4441034aa 222 Gene3D G3DSA:1.10.10.10 131 220 3.8E-25 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_03815 0cecac2a95d50abbecb78de4441034aa 222 Gene3D G3DSA:2.60.120.10 1 130 2.1E-33 T 13-10-2018 IPR014710 RmlC-like jelly roll fold COP00_05140 0c1b51556d18f17d25ed23bdbf86cff5 143 SUPERFAMILY SSF46785 10 138 6.43E-29 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_05140 0c1b51556d18f17d25ed23bdbf86cff5 143 PRINTS PR00598 Bacterial regulatory protein MarR family signature 117 137 8.3E-12 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 COP00_05140 0c1b51556d18f17d25ed23bdbf86cff5 143 PRINTS PR00598 Bacterial regulatory protein MarR family signature 87 103 8.3E-12 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 COP00_05140 0c1b51556d18f17d25ed23bdbf86cff5 143 PRINTS PR00598 Bacterial regulatory protein MarR family signature 68 83 8.3E-12 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 COP00_05140 0c1b51556d18f17d25ed23bdbf86cff5 143 PRINTS PR00598 Bacterial regulatory protein MarR family signature 51 67 8.3E-12 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 COP00_05140 0c1b51556d18f17d25ed23bdbf86cff5 143 Pfam PF01047 MarR family 35 91 4.7E-18 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 COP00_05140 0c1b51556d18f17d25ed23bdbf86cff5 143 SMART SM00347 27 127 1.0E-32 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 COP00_05140 0c1b51556d18f17d25ed23bdbf86cff5 143 Gene3D G3DSA:1.10.10.10 2 140 2.2E-30 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_03030 112264aaa1f1bb6e46ed0927bb581824 144 SUPERFAMILY SSF51283 15 143 6.8E-26 T 13-10-2018 IPR036157 dUTPase-like superfamily COP00_03030 112264aaa1f1bb6e46ed0927bb581824 144 Pfam PF00692 dUTPase 27 141 1.9E-16 T 13-10-2018 IPR029054 dUTPase-like COP00_03030 112264aaa1f1bb6e46ed0927bb581824 144 Gene3D G3DSA:2.70.40.10 1 144 2.4E-42 T 13-10-2018 IPR036157 dUTPase-like superfamily COP00_03005 1ae431752c735422a3f7733fd8f537e6 330 SUPERFAMILY SSF47240 5 325 8.62E-93 T 13-10-2018 IPR009078 Ferritin-like superfamily COP00_03005 1ae431752c735422a3f7733fd8f537e6 330 Pfam PF00268 Ribonucleotide reductase, small chain 11 287 2.6E-83 T 13-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 COP00_03005 1ae431752c735422a3f7733fd8f537e6 330 TIGRFAM TIGR04171 RNR_1b_NrdF: ribonucleoside-diphosphate reductase, class 1b, beta subunit 8 325 2.9E-144 T 13-10-2018 IPR026494 Ribonucleoside reductase subunit beta, NrdF GO:0005971|GO:0009263 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 COP00_03005 1ae431752c735422a3f7733fd8f537e6 330 PIRSF PIRSF000355 1 322 7.7E-93 T 13-10-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 COP00_03005 1ae431752c735422a3f7733fd8f537e6 330 Gene3D G3DSA:1.10.620.20 7 296 3.4E-112 T 13-10-2018 IPR012348 Ribonucleotide reductase-like GO:0016491|GO:0055114 Reactome: R-HSA-499943 COP00_03005 1ae431752c735422a3f7733fd8f537e6 330 ProSitePatterns PS00368 Ribonucleotide reductase small subunit signature. 99 116 - T 13-10-2018 IPR030475 Ribonucleotide reductase small subunit, acitve site KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|KEGG: 00983+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 COP00_18670 c382a497b419b29683d9436cd9606c35 190 SMART SM00420 6 58 2.1E-10 T 13-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 COP00_18670 c382a497b419b29683d9436cd9606c35 190 Pfam PF05573 NosL 65 176 2.2E-6 T 13-10-2018 IPR008719 Nitrous oxide reductase accessory protein NosL COP00_18670 c382a497b419b29683d9436cd9606c35 190 Gene3D G3DSA:1.10.10.10 1 59 4.8E-8 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_18670 c382a497b419b29683d9436cd9606c35 190 SUPERFAMILY SSF46785 6 53 3.27E-9 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_18670 c382a497b419b29683d9436cd9606c35 190 SUPERFAMILY SSF160387 82 187 1.86E-24 T 13-10-2018 COP00_18670 c382a497b419b29683d9436cd9606c35 190 Pfam PF08220 DeoR-like helix-turn-helix domain 6 60 2.7E-13 T 13-10-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 COP00_09060 62be62ea0348c0835ce3d5e9cdaf0b7c 237 TIGRFAM TIGR02840 spore_YtaF: putative sporulation protein YtaF 32 237 1.4E-80 T 13-10-2018 IPR014205 Sporulation protein YtaF COP00_09060 62be62ea0348c0835ce3d5e9cdaf0b7c 237 Pfam PF02659 Putative manganese efflux pump 15 109 2.0E-13 T 13-10-2018 IPR003810 Putative manganese efflux pump COP00_09060 62be62ea0348c0835ce3d5e9cdaf0b7c 237 Pfam PF02659 Putative manganese efflux pump 155 235 1.7E-10 T 13-10-2018 IPR003810 Putative manganese efflux pump COP00_12965 bd604bd3c67d40bf7ff4641bf2901b74 957 Gene3D G3DSA:1.20.1580.10 92 492 4.4E-256 T 13-10-2018 COP00_12965 bd604bd3c67d40bf7ff4641bf2901b74 957 ProSitePatterns PS00211 ABC transporters family signature. 828 842 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 COP00_12965 bd604bd3c67d40bf7ff4641bf2901b74 957 ProSitePatterns PS00211 ABC transporters family signature. 487 501 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 COP00_12965 bd604bd3c67d40bf7ff4641bf2901b74 957 Gene3D G3DSA:3.40.50.300 8 595 4.4E-256 T 13-10-2018 COP00_12965 bd604bd3c67d40bf7ff4641bf2901b74 957 Gene3D G3DSA:1.20.1580.10 691 828 3.0E-148 T 13-10-2018 COP00_12965 bd604bd3c67d40bf7ff4641bf2901b74 957 Hamap MF_00205 UvrABC system protein A [uvrA]. 3 938 23.71 T 13-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 COP00_12965 bd604bd3c67d40bf7ff4641bf2901b74 957 Pfam PF00005 ABC transporter 622 858 7.7E-11 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 COP00_12965 bd604bd3c67d40bf7ff4641bf2901b74 957 SUPERFAMILY SSF52540 4 569 2.53E-47 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_12965 bd604bd3c67d40bf7ff4641bf2901b74 957 SUPERFAMILY SSF52540 614 911 2.96E-53 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_12965 bd604bd3c67d40bf7ff4641bf2901b74 957 SMART SM00382 631 906 0.012 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_12965 bd604bd3c67d40bf7ff4641bf2901b74 957 SMART SM00382 25 564 13.0 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_12965 bd604bd3c67d40bf7ff4641bf2901b74 957 Gene3D G3DSA:3.40.50.300 612 934 3.0E-148 T 13-10-2018 COP00_12965 bd604bd3c67d40bf7ff4641bf2901b74 957 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 5 923 0.0 T 13-10-2018 IPR004602 UvrABC system subunit A GO:0003677|GO:0006289|GO:0009380|GO:0016887 COP00_12965 bd604bd3c67d40bf7ff4641bf2901b74 957 Gene3D G3DSA:1.10.8.280 286 403 4.4E-256 T 13-10-2018 COP00_12965 bd604bd3c67d40bf7ff4641bf2901b74 957 Gene3D G3DSA:3.30.190.20 132 241 4.4E-256 T 13-10-2018 COP00_00625 ae02a7ab51ed490b3623fb70c20a40a4 109 Pfam PF14036 YlaH-like protein 19 94 7.0E-31 T 13-10-2018 IPR025620 YlaH-like protein COP00_21080 559479de87b72a7a45125fc8eeb8d6f8 850 Pfam PF03706 Lysylphosphatidylglycerol synthase TM region 13 287 6.6E-18 T 13-10-2018 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD COP00_21080 559479de87b72a7a45125fc8eeb8d6f8 850 Pfam PF09924 Uncharacterised conserved protein (DUF2156) 537 828 7.5E-96 T 13-10-2018 IPR024320 Phosphatidylglycerol lysyltransferase, C-terminal COP00_21080 559479de87b72a7a45125fc8eeb8d6f8 850 SUPERFAMILY SSF55729 648 828 1.69E-14 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase COP00_06140 abb695ee4999c5a935af3e77c5928236 268 Pfam PF05711 Macrocin-O-methyltransferase (TylF) 6 267 2.4E-104 T 13-10-2018 IPR008884 Macrocin-O-methyltransferase COP00_06140 abb695ee4999c5a935af3e77c5928236 268 Gene3D G3DSA:3.40.50.150 4 267 2.5E-71 T 13-10-2018 COP00_06140 abb695ee4999c5a935af3e77c5928236 268 SUPERFAMILY SSF53335 81 236 2.89E-8 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase COP00_00570 1e689340729425a2baa56310e13bf350 124 SUPERFAMILY SSF52833 10 123 8.24E-5 T 13-10-2018 IPR036249 Thioredoxin-like superfamily COP00_09255 840338b4eba4871a3a9e984ec476a4cc 71 Pfam PF00269 Small, acid-soluble spore proteins, alpha/beta type 11 65 7.6E-22 T 13-10-2018 IPR001448 Small acid-soluble spore protein, alpha/beta-type GO:0003690|GO:0006265 COP00_09255 840338b4eba4871a3a9e984ec476a4cc 71 ProSitePatterns PS00684 Small, acid-soluble spore proteins, alpha/beta type, signature 2. 44 58 - T 13-10-2018 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site GO:0003690|GO:0006265 COP00_09255 840338b4eba4871a3a9e984ec476a4cc 71 Gene3D G3DSA:1.10.8.910 11 70 3.2E-30 T 13-10-2018 IPR038300 SASP, alpha/beta-type superfamily COP00_09255 840338b4eba4871a3a9e984ec476a4cc 71 ProSitePatterns PS00304 Small, acid-soluble spore proteins, alpha/beta type, signature 1. 26 35 - T 13-10-2018 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site GO:0003690|GO:0006265 COP00_12900 f476970a361e218f13ffdd52331cddec 172 SUPERFAMILY SSF51161 10 160 2.36E-35 T 13-10-2018 IPR011004 Trimeric LpxA-like superfamily COP00_12900 f476970a361e218f13ffdd52331cddec 172 Gene3D G3DSA:2.160.10.10 18 169 2.6E-30 T 13-10-2018 COP00_12900 f476970a361e218f13ffdd52331cddec 172 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 107 139 5.0E-11 T 13-10-2018 IPR001451 Hexapeptide repeat COP00_19955 f55c6347b30df37ce331c1d0d6c91bfe 119 Pfam PF04343 Protein of unknown function, DUF488 5 115 1.5E-32 T 13-10-2018 IPR007438 Protein of unknown function DUF488 COP00_04265 929065f08537bae5ecbdbf776d036604 183 Pfam PF14435 SUKH-4 immunity protein 16 174 6.7E-12 T 13-10-2018 IPR025851 SUKH-4 immunity protein COP00_16795 64db963cbb09c5713dfae3eec7e309aa 109 Gene3D G3DSA:2.30.30.30 6 74 6.2E-7 T 13-10-2018 IPR014722 Ribosomal protein L2, domain 2 COP00_16795 64db963cbb09c5713dfae3eec7e309aa 109 SUPERFAMILY SSF50104 3 83 1.43E-13 T 13-10-2018 IPR008991 Translation protein SH3-like domain superfamily COP00_22485 86925adce38fb228565a7a17f01fc385 72 Pfam PF10676 Spore germination protein gerPA/gerPF 1 71 1.0E-29 T 13-10-2018 IPR019618 Spore germination protein GerPA/GerPF COP00_03845 acde2c19b61957dd5dce1ecec6c42575 86 ProDom PD062295 YNFE TRANSFERASE YFNE ACETYLTRANSFERASE 3 80 5.0E-30 T 13-10-2018 IPR020302 Uncharacterised protein family YnfE COP00_03845 acde2c19b61957dd5dce1ecec6c42575 86 Pfam PF17452 Uncharacterized protein YnfE 3 80 1.5E-38 T 13-10-2018 IPR020302 Uncharacterised protein family YnfE COP00_20780 eb250fcb448b9554cd71cd68f7c53786 139 Pfam PF17314 Family of unknown function (DUF5360) 5 128 4.3E-58 T 13-10-2018 IPR020348 Uncharacterised protein family YvaD COP00_20780 eb250fcb448b9554cd71cd68f7c53786 139 ProDom PD082409 MEMBRANE YVAD TRANSMEMBRANE 4 121 3.0E-37 T 13-10-2018 IPR020348 Uncharacterised protein family YvaD COP00_01355 7ebd1f4fc9107c65bb08a18c20ee588a 533 PIRSF PIRSF004862 1 533 9.6E-114 T 13-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 COP00_01355 7ebd1f4fc9107c65bb08a18c20ee588a 533 TIGRFAM TIGR01167 LPXTG_anchor: LPXTG cell wall anchor domain 443 474 0.0021 T 13-10-2018 COP00_01355 7ebd1f4fc9107c65bb08a18c20ee588a 533 Pfam PF08345 Flagellar M-ring protein C-terminal 258 402 1.2E-23 T 13-10-2018 IPR013556 Flagellar M-ring C-terminal COP00_01355 7ebd1f4fc9107c65bb08a18c20ee588a 533 Gene3D G3DSA:3.30.300.30 133 223 2.3E-9 T 13-10-2018 COP00_01355 7ebd1f4fc9107c65bb08a18c20ee588a 533 Pfam PF01514 Secretory protein of YscJ/FliF family 32 221 5.9E-64 T 13-10-2018 IPR006182 Secretory protein YscJ/FliF COP00_01355 7ebd1f4fc9107c65bb08a18c20ee588a 533 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 1 533 1.1E-168 T 13-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 COP00_01355 7ebd1f4fc9107c65bb08a18c20ee588a 533 PRINTS PR01009 Flagellar M-ring protein signature 154 168 1.1E-25 T 13-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 COP00_01355 7ebd1f4fc9107c65bb08a18c20ee588a 533 PRINTS PR01009 Flagellar M-ring protein signature 271 289 1.1E-25 T 13-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 COP00_01355 7ebd1f4fc9107c65bb08a18c20ee588a 533 PRINTS PR01009 Flagellar M-ring protein signature 122 140 1.1E-25 T 13-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 COP00_01355 7ebd1f4fc9107c65bb08a18c20ee588a 533 PRINTS PR01009 Flagellar M-ring protein signature 198 216 1.1E-25 T 13-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 COP00_01355 7ebd1f4fc9107c65bb08a18c20ee588a 533 PRINTS PR01009 Flagellar M-ring protein signature 350 374 1.1E-25 T 13-10-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 COP00_18495 01c8be3f5ea236749934af8e7df0430b 423 Gene3D G3DSA:1.20.1250.20 1 411 1.3E-59 T 13-10-2018 COP00_18495 01c8be3f5ea236749934af8e7df0430b 423 Pfam PF07690 Major Facilitator Superfamily 14 275 8.1E-36 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 COP00_18495 01c8be3f5ea236749934af8e7df0430b 423 SUPERFAMILY SSF103473 5 410 1.57E-68 T 13-10-2018 IPR036259 MFS transporter superfamily COP00_18495 01c8be3f5ea236749934af8e7df0430b 423 PIRSF PIRSF002808 278 423 2.4E-9 T 13-10-2018 IPR000849 Sugar phosphate transporter GO:0016021|GO:0022857|GO:0055085 COP00_18495 01c8be3f5ea236749934af8e7df0430b 423 PIRSF PIRSF002808 1 316 8.4E-27 T 13-10-2018 IPR000849 Sugar phosphate transporter GO:0016021|GO:0022857|GO:0055085 COP00_13725 c4c2b0e86995f5de4b4b9df6c1d92c12 126 ProDom PD031895 YWNG MEMBRANE TRANSMEMBRANE YWNC 4 99 2.0E-21 T 13-10-2018 IPR035287 Protein of unknown function DUF5362 COP00_13725 c4c2b0e86995f5de4b4b9df6c1d92c12 126 Pfam PF17319 Family of unknown function (DUF5362) 11 108 4.9E-8 T 13-10-2018 IPR035287 Protein of unknown function DUF5362 COP00_07500 f2d9fbf6473f0e2d151fdc8575736a7e 334 Gene3D G3DSA:3.40.50.720 129 297 7.2E-121 T 13-10-2018 COP00_07500 f2d9fbf6473f0e2d151fdc8575736a7e 334 Pfam PF00107 Zinc-binding dehydrogenase 162 289 2.7E-15 T 13-10-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 COP00_07500 f2d9fbf6473f0e2d151fdc8575736a7e 334 SUPERFAMILY SSF51735 119 294 3.84E-37 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily COP00_07500 f2d9fbf6473f0e2d151fdc8575736a7e 334 SMART SM00829 12 328 2.7E-6 T 13-10-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 COP00_07500 f2d9fbf6473f0e2d151fdc8575736a7e 334 SUPERFAMILY SSF50129 5 148 1.22E-41 T 13-10-2018 IPR011032 GroES-like superfamily COP00_07500 f2d9fbf6473f0e2d151fdc8575736a7e 334 TIGRFAM TIGR02823 oxido_YhdH: putative quinone oxidoreductase, YhdH/YhfP family 6 330 4.5E-142 T 13-10-2018 IPR014188 Acrylyl-CoA reductase AcuI COP00_07500 f2d9fbf6473f0e2d151fdc8575736a7e 334 Gene3D G3DSA:3.90.180.10 20 328 7.2E-121 T 13-10-2018 COP00_15010 cd32fca11610aa2d48d8948e18f112d7 227 Pfam PF13739 Domain of unknown function (DUF4163) 50 131 6.2E-16 T 13-10-2018 IPR025303 Deacetylase PdaC COP00_15010 cd32fca11610aa2d48d8948e18f112d7 227 Gene3D G3DSA:3.30.565.40 39 145 3.4E-20 T 13-10-2018 COP00_15010 cd32fca11610aa2d48d8948e18f112d7 227 Gene3D G3DSA:3.90.640.20 147 227 2.7E-14 T 13-10-2018 IPR037126 PdaC/RsiV-like superfamily COP00_15010 cd32fca11610aa2d48d8948e18f112d7 227 Pfam PF11738 Protein of unknown function (DUF3298) 153 223 1.5E-11 T 13-10-2018 IPR021729 Domain of unknown function DUF3298 COP00_07880 4c6cf8966d8d54c5a7d005eaf4fa9d70 419 Gene3D G3DSA:1.20.1250.20 7 393 1.7E-38 T 13-10-2018 COP00_07880 4c6cf8966d8d54c5a7d005eaf4fa9d70 419 SUPERFAMILY SSF103473 11 396 2.35E-48 T 13-10-2018 IPR036259 MFS transporter superfamily COP00_07880 4c6cf8966d8d54c5a7d005eaf4fa9d70 419 Pfam PF05977 Transmembrane secretion effector 19 407 9.6E-25 T 13-10-2018 IPR010290 Transmembrane secretion effector COP00_11750 f36544030a479d8f330cee07398b8a3d 138 Pfam PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system 8 124 2.7E-16 T 13-10-2018 IPR031807 HicB-like antitoxin of toxin-antitoxin system COP00_11750 f36544030a479d8f330cee07398b8a3d 138 SUPERFAMILY SSF143100 3 68 4.84E-21 T 13-10-2018 IPR035069 TTHA1013/TTHA0281-like COP00_11750 f36544030a479d8f330cee07398b8a3d 138 Gene3D G3DSA:3.30.160.250 2 97 2.9E-28 T 13-10-2018 COP00_16110 3c54dcc1d5fd45701b9eeefa241b37e0 88 TIGRFAM TIGR02862 spore_BofA: pro-sigmaK processing inhibitor BofA 5 86 2.7E-28 T 13-10-2018 IPR010001 SigmaK-factor processing regulatory BofA COP00_16110 3c54dcc1d5fd45701b9eeefa241b37e0 88 Pfam PF07441 SigmaK-factor processing regulatory protein BofA 11 85 2.7E-21 T 13-10-2018 IPR010001 SigmaK-factor processing regulatory BofA COP00_04695 3be09615f2ed904c6c6070372de652dd 119 Pfam PF06486 Protein of unknown function (DUF1093) 25 104 2.1E-16 T 13-10-2018 IPR006542 Protein of unknown function DUF1093 COP00_04695 3be09615f2ed904c6c6070372de652dd 119 SUPERFAMILY SSF159121 22 116 6.28E-20 T 13-10-2018 IPR036166 YxeA-like superfamily COP00_04695 3be09615f2ed904c6c6070372de652dd 119 TIGRFAM TIGR01655 yxeA_fam: conserved hypothetical protein 2 107 4.7E-16 T 13-10-2018 IPR006542 Protein of unknown function DUF1093 COP00_04695 3be09615f2ed904c6c6070372de652dd 119 Gene3D G3DSA:2.40.50.480 24 118 1.7E-16 T 13-10-2018 IPR036166 YxeA-like superfamily COP00_09680 82fa7c6e5fa86d43beb925c921549aba 130 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 75 1.2E-16 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 COP00_09680 82fa7c6e5fa86d43beb925c921549aba 130 Gene3D G3DSA:1.10.10.10 8 127 1.5E-25 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_09680 82fa7c6e5fa86d43beb925c921549aba 130 SUPERFAMILY SSF46785 5 79 6.04E-21 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_09680 82fa7c6e5fa86d43beb925c921549aba 130 SMART SM00345 16 75 8.8E-15 T 13-10-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 COP00_06065 147338d764214e4da064189167bfaccc 141 Pfam PF13782 Stage V sporulation protein AB 27 135 1.9E-34 T 13-10-2018 IPR020144 Stage V sporulation protein AB COP00_06065 147338d764214e4da064189167bfaccc 141 ProDom PD086170 SPORULATION AB V STAGE MEMBRANE SPOVAB TRANSMEMBRANE 28 138 2.0E-50 T 13-10-2018 IPR020144 Stage V sporulation protein AB COP00_15385 e7cfa84da723cb48fec93777f4656e25 361 Pfam PF01757 Acyltransferase family 8 331 1.2E-20 T 13-10-2018 IPR002656 Acyltransferase 3 GO:0016747 COP00_08330 5b63009ad3fc5558b60a4bfc2e7e3daa 215 Gene3D G3DSA:1.10.510.10 13 180 1.9E-10 T 13-10-2018 COP00_08330 5b63009ad3fc5558b60a4bfc2e7e3daa 215 ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 32 53 - T 13-10-2018 IPR017441 Protein kinase, ATP binding site GO:0005524 COP00_08330 5b63009ad3fc5558b60a4bfc2e7e3daa 215 SUPERFAMILY SSF56112 29 159 2.05E-18 T 13-10-2018 IPR011009 Protein kinase-like domain superfamily COP00_13820 f28a7c985abf8cc8e3629597aad8ca3a 172 Hamap MF_01398 ATP synthase subunit b [atpF]. 13 150 13.764 T 13-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 COP00_13820 f28a7c985abf8cc8e3629597aad8ca3a 172 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 22 168 1.4E-48 T 13-10-2018 IPR005864 ATP synthase, F0 complex, subunit b, bacterial GO:0015078|GO:0015986|GO:0045263 COP00_13820 f28a7c985abf8cc8e3629597aad8ca3a 172 SUPERFAMILY SSF81573 76 133 2.22E-11 T 13-10-2018 IPR028987 F-type ATP synthase subunit B-like, membrane domain superfamily COP00_13820 f28a7c985abf8cc8e3629597aad8ca3a 172 Pfam PF00430 ATP synthase B/B' CF(0) 18 149 2.2E-39 T 13-10-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 COP00_06645 14192f9ff2c9dbab2ba8454ade480441 121 Pfam PF06686 Stage III sporulation protein AC/AD protein family 61 115 1.2E-19 T 13-10-2018 IPR025664 Stage III sporulation protein AC/AD family COP00_06645 14192f9ff2c9dbab2ba8454ade480441 121 Pfam PF06686 Stage III sporulation protein AC/AD protein family 1 47 1.4E-8 T 13-10-2018 IPR025664 Stage III sporulation protein AC/AD family COP00_06645 14192f9ff2c9dbab2ba8454ade480441 121 TIGRFAM TIGR02849 spore_III_AD: stage III sporulation protein AD 17 117 1.9E-39 T 13-10-2018 IPR014211 Stage III sporulation protein AD COP00_23135 a6e9787c2b5965849c9c2a0dbf222b5d 186 SUPERFAMILY SSF50494 5 180 7.47E-27 T 13-10-2018 IPR009003 Peptidase S1, PA clan COP00_23135 a6e9787c2b5965849c9c2a0dbf222b5d 186 Pfam PF00089 Trypsin 5 171 1.5E-11 T 13-10-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 COP00_23135 a6e9787c2b5965849c9c2a0dbf222b5d 186 PRINTS PR00839 V8 serine protease family signature 1 18 2.4E-16 T 13-10-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 COP00_23135 a6e9787c2b5965849c9c2a0dbf222b5d 186 PRINTS PR00839 V8 serine protease family signature 126 142 2.4E-16 T 13-10-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 COP00_23135 a6e9787c2b5965849c9c2a0dbf222b5d 186 PRINTS PR00839 V8 serine protease family signature 93 106 2.4E-16 T 13-10-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 COP00_23135 a6e9787c2b5965849c9c2a0dbf222b5d 186 PRINTS PR00839 V8 serine protease family signature 32 44 2.4E-16 T 13-10-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 COP00_23135 a6e9787c2b5965849c9c2a0dbf222b5d 186 PRINTS PR00839 V8 serine protease family signature 143 155 2.4E-16 T 13-10-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 COP00_23135 a6e9787c2b5965849c9c2a0dbf222b5d 186 Gene3D G3DSA:2.40.10.10 84 153 1.3E-48 T 13-10-2018 COP00_23135 a6e9787c2b5965849c9c2a0dbf222b5d 186 Gene3D G3DSA:2.40.10.10 5 83 1.3E-48 T 13-10-2018 COP00_18140 da835efb4bd8d935482cc3972346fbf6 292 Pfam PF03773 Predicted permease 5 291 3.8E-85 T 13-10-2018 IPR005524 Predicted permease DUF318 COP00_09435 f2f09ae76b927eda078cf2eb29cb3302 281 SUPERFAMILY SSF56281 4 263 1.11E-44 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like COP00_09435 f2f09ae76b927eda078cf2eb29cb3302 281 SMART SM00849 50 257 9.2E-19 T 13-10-2018 IPR001279 Metallo-beta-lactamase COP00_09435 f2f09ae76b927eda078cf2eb29cb3302 281 Pfam PF00753 Metallo-beta-lactamase superfamily 54 257 2.1E-17 T 13-10-2018 IPR001279 Metallo-beta-lactamase COP00_09435 f2f09ae76b927eda078cf2eb29cb3302 281 Gene3D G3DSA:3.60.15.10 4 269 2.9E-86 T 13-10-2018 IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like COP00_17045 087dc2d9f2189224d0acc2534840bdf8 100 Gene3D G3DSA:1.10.10.10 1 100 3.2E-26 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_17045 087dc2d9f2189224d0acc2534840bdf8 100 SUPERFAMILY SSF46785 3 96 5.58E-21 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_17045 087dc2d9f2189224d0acc2534840bdf8 100 Pfam PF12840 Helix-turn-helix domain 5 77 5.7E-11 T 13-10-2018 COP00_17045 087dc2d9f2189224d0acc2534840bdf8 100 SMART SM00418 5 98 1.4E-13 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 COP00_03195 859f22a98598538e2ce2aea55afb5d97 179 Pfam PF02732 ERCC4 domain 24 163 1.7E-15 T 13-10-2018 IPR006166 ERCC4 domain GO:0003677|GO:0004518 Reactome: R-HSA-6783310 COP00_03195 859f22a98598538e2ce2aea55afb5d97 179 Gene3D G3DSA:3.40.50.10130 13 168 1.5E-12 T 13-10-2018 COP00_03195 859f22a98598538e2ce2aea55afb5d97 179 SMART SM00891 21 116 1.5E-13 T 13-10-2018 IPR006166 ERCC4 domain GO:0003677|GO:0004518 Reactome: R-HSA-6783310 COP00_03195 859f22a98598538e2ce2aea55afb5d97 179 SUPERFAMILY SSF52980 19 163 5.36E-16 T 13-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 COP00_23355 859f22a98598538e2ce2aea55afb5d97 179 Pfam PF02732 ERCC4 domain 24 163 1.7E-15 T 13-10-2018 IPR006166 ERCC4 domain GO:0003677|GO:0004518 Reactome: R-HSA-6783310 COP00_23355 859f22a98598538e2ce2aea55afb5d97 179 Gene3D G3DSA:3.40.50.10130 13 168 1.5E-12 T 13-10-2018 COP00_23355 859f22a98598538e2ce2aea55afb5d97 179 SMART SM00891 21 116 1.5E-13 T 13-10-2018 IPR006166 ERCC4 domain GO:0003677|GO:0004518 Reactome: R-HSA-6783310 COP00_23355 859f22a98598538e2ce2aea55afb5d97 179 SUPERFAMILY SSF52980 19 163 5.36E-16 T 13-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 COP00_11670 906e2c34bf9ae0d2e1f669cabab44474 102 TIGRFAM TIGR01563 gp16_SPP1: putative phage head-tail adaptor 5 97 2.8E-16 T 13-10-2018 IPR008767 Bacteriophage SPP1, head-tail adaptor COP00_11670 906e2c34bf9ae0d2e1f669cabab44474 102 Gene3D G3DSA:2.40.10.270 2 102 8.5E-19 T 13-10-2018 IPR038666 Bacteriophage SPP1, head-tail adaptor superfamily COP00_11670 906e2c34bf9ae0d2e1f669cabab44474 102 Pfam PF05521 Phage head-tail joining protein 6 98 4.0E-23 T 13-10-2018 IPR008767 Bacteriophage SPP1, head-tail adaptor COP00_08830 089b88331b7cb697387ec6adab763a69 177 Pfam PF02674 Colicin V production protein 2 162 3.6E-33 T 13-10-2018 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 COP00_17260 2e184504174380d0a0e822b5d005b80f 122 Pfam PF06125 Bacterial protein of unknown function (DUF961) 4 103 3.3E-29 T 13-10-2018 IPR010365 Protein of unknown function DUF961 COP00_17260 2e184504174380d0a0e822b5d005b80f 122 Gene3D G3DSA:2.40.50.390 1 111 8.0E-37 T 13-10-2018 IPR038620 YdcP-like superfamily COP00_06375 f1ff7b248b52645f8828b9ffd668a102 49 Pfam PF00471 Ribosomal protein L33 3 49 2.2E-22 T 13-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_06375 f1ff7b248b52645f8828b9ffd668a102 49 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 2 49 7.0E-20 T 13-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_06375 f1ff7b248b52645f8828b9ffd668a102 49 SUPERFAMILY SSF57829 1 49 1.1E-18 T 13-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 COP00_06375 f1ff7b248b52645f8828b9ffd668a102 49 Gene3D G3DSA:2.20.28.120 1 49 3.2E-23 T 13-10-2018 IPR038584 Ribosomal protein L33 superfamily Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_06375 f1ff7b248b52645f8828b9ffd668a102 49 ProSitePatterns PS00582 Ribosomal protein L33 signature. 17 36 - T 13-10-2018 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 COP00_06375 f1ff7b248b52645f8828b9ffd668a102 49 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 1 49 18.535 T 13-10-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_14450 e846c6660d644fd2301a61d02b42c143 126 Gene3D G3DSA:3.10.180.10 1 126 1.8E-27 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase COP00_14450 e846c6660d644fd2301a61d02b42c143 126 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 4 122 2.2E-15 T 13-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain COP00_14450 e846c6660d644fd2301a61d02b42c143 126 SUPERFAMILY SSF54593 3 125 8.8E-28 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase COP00_04725 be7c30c9ca257b93d29d08b59751fdfb 61 Pfam PF00253 Ribosomal protein S14p/S29e 10 60 9.6E-24 T 13-10-2018 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 COP00_04725 be7c30c9ca257b93d29d08b59751fdfb 61 SUPERFAMILY SSF57716 4 61 1.21E-21 T 13-10-2018 COP00_04725 be7c30c9ca257b93d29d08b59751fdfb 61 ProSitePatterns PS00527 Ribosomal protein S14 signature. 23 45 - T 13-10-2018 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 COP00_04725 be7c30c9ca257b93d29d08b59751fdfb 61 Hamap MF_01364_B 30S ribosomal protein S14 type Z [rpsZ]. 1 61 26.415 T 13-10-2018 IPR023053 Ribosomal protein S14, type Z COP00_04725 be7c30c9ca257b93d29d08b59751fdfb 61 Gene3D G3DSA:4.10.830.10 1 61 1.3E-30 T 13-10-2018 COP00_07125 f323a87669f4f3cadcb3cd0f783f0d6f 314 Pfam PF02401 LytB protein 4 284 1.3E-82 T 13-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 COP00_07125 f323a87669f4f3cadcb3cd0f783f0d6f 314 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 1 288 33.167 T 13-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 COP00_07125 f323a87669f4f3cadcb3cd0f783f0d6f 314 Gene3D G3DSA:3.40.50.11270 12 103 3.9E-97 T 13-10-2018 COP00_07125 f323a87669f4f3cadcb3cd0f783f0d6f 314 Gene3D G3DSA:3.40.1010.20 104 197 3.9E-97 T 13-10-2018 COP00_07125 f323a87669f4f3cadcb3cd0f783f0d6f 314 Gene3D G3DSA:3.40.1010.20 7 284 3.9E-97 T 13-10-2018 COP00_07125 f323a87669f4f3cadcb3cd0f783f0d6f 314 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 3 286 1.2E-97 T 13-10-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 COP00_13770 98a12b3578e3472e1a5fd61985ee7a9d 230 Gene3D G3DSA:3.40.50.410 28 230 8.3E-31 T 13-10-2018 IPR036465 von Willebrand factor A-like domain superfamily COP00_13770 98a12b3578e3472e1a5fd61985ee7a9d 230 SMART SM00327 36 225 2.4E-13 T 13-10-2018 IPR002035 von Willebrand factor, type A COP00_13770 98a12b3578e3472e1a5fd61985ee7a9d 230 SUPERFAMILY SSF53300 37 223 7.12E-23 T 13-10-2018 IPR036465 von Willebrand factor A-like domain superfamily COP00_13770 98a12b3578e3472e1a5fd61985ee7a9d 230 Pfam PF00092 von Willebrand factor type A domain 38 223 5.8E-18 T 13-10-2018 IPR002035 von Willebrand factor, type A COP00_15545 60d560308fc05a5381b72a822b686739 211 Gene3D G3DSA:3.40.50.880 1 205 2.2E-45 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like COP00_15545 60d560308fc05a5381b72a822b686739 211 Pfam PF01965 DJ-1/PfpI family 3 178 8.5E-15 T 13-10-2018 IPR002818 DJ-1/PfpI Reactome: R-HSA-3899300 COP00_15545 60d560308fc05a5381b72a822b686739 211 SUPERFAMILY SSF52317 1 198 4.89E-30 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like COP00_05680 aab4337d172a6fe04c42ed9166b081a3 320 TIGRFAM TIGR02748 GerC3_HepT: heptaprenyl diphosphate synthase component II 2 320 8.4E-170 T 13-10-2018 IPR014119 Heptaprenyl diphosphate synthase component II KEGG: 00900+2.5.1.30|MetaCyc: PWY-5807 COP00_05680 aab4337d172a6fe04c42ed9166b081a3 320 Pfam PF00348 Polyprenyl synthetase 31 271 8.3E-67 T 13-10-2018 IPR000092 Polyprenyl synthetase GO:0008299 COP00_05680 aab4337d172a6fe04c42ed9166b081a3 320 SUPERFAMILY SSF48576 5 319 4.8E-87 T 13-10-2018 IPR008949 Isoprenoid synthase domain superfamily COP00_05680 aab4337d172a6fe04c42ed9166b081a3 320 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 203 215 - T 13-10-2018 IPR033749 Polyprenyl synthetase, conserved site COP00_05680 aab4337d172a6fe04c42ed9166b081a3 320 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 81 95 - T 13-10-2018 IPR033749 Polyprenyl synthetase, conserved site COP00_05680 aab4337d172a6fe04c42ed9166b081a3 320 Gene3D G3DSA:1.10.600.10 7 320 4.7E-99 T 13-10-2018 IPR008949 Isoprenoid synthase domain superfamily COP00_17365 45e425f618c6616ed3ad5fcb684ca142 241 SUPERFAMILY SSF52980 32 236 5.15E-39 T 13-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 COP00_17365 45e425f618c6616ed3ad5fcb684ca142 241 Pfam PF14511 Type II restriction endonuclease EcoO109I 11 212 8.9E-45 T 13-10-2018 IPR032793 Type II restriction endonuclease EcoO109IR COP00_10035 d3eaf04447744008cdf8fee777a265a4 100 Gene3D G3DSA:2.30.29.30 1 100 4.1E-9 T 13-10-2018 IPR011993 PH-like domain superfamily COP00_10035 d3eaf04447744008cdf8fee777a265a4 100 Pfam PF02893 GRAM domain 5 85 1.3E-6 T 13-10-2018 IPR004182 GRAM domain COP00_19205 e3842909166bffc9ab1d0ffa3b98c1c1 110 SMART SM00418 9 91 2.2E-19 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 COP00_19205 e3842909166bffc9ab1d0ffa3b98c1c1 110 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 44 59 8.3E-12 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 COP00_19205 e3842909166bffc9ab1d0ffa3b98c1c1 110 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 11 26 8.3E-12 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 COP00_19205 e3842909166bffc9ab1d0ffa3b98c1c1 110 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 59 74 8.3E-12 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 COP00_19205 e3842909166bffc9ab1d0ffa3b98c1c1 110 SUPERFAMILY SSF46785 8 100 7.28E-25 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_19205 e3842909166bffc9ab1d0ffa3b98c1c1 110 Pfam PF01022 Bacterial regulatory protein, arsR family 16 63 2.5E-12 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 COP00_19205 e3842909166bffc9ab1d0ffa3b98c1c1 110 Gene3D G3DSA:1.10.10.10 2 110 3.5E-28 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_05265 cb81c341dbf01a60c1e55ce335007d99 302 SUPERFAMILY SSF52317 17 297 2.66E-103 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like COP00_05265 cb81c341dbf01a60c1e55ce335007d99 302 ProDom PD037892 HOMOSERINE O-SUCCINYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIOSYNTHESIS TRANSSUCCINYLASE HTS METHIONINE O- AMINO-ACID 36 289 6.0E-141 T 13-10-2018 COP00_05265 cb81c341dbf01a60c1e55ce335007d99 302 Hamap MF_00295 Homoserine O-succinyltransferase [metAS]. 31 299 44.019 T 13-10-2018 IPR033752 MetA family COP00_05265 cb81c341dbf01a60c1e55ce335007d99 302 TIGRFAM TIGR01001 metA: homoserine O-succinyltransferase 1 300 3.4E-130 T 13-10-2018 IPR005697 Homoserine O-succinyltransferase MetA GO:0005737|GO:0008899|GO:0019281 COP00_05265 cb81c341dbf01a60c1e55ce335007d99 302 Gene3D G3DSA:3.40.50.880 1 301 3.5E-127 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like COP00_05265 cb81c341dbf01a60c1e55ce335007d99 302 Pfam PF04204 Homoserine O-succinyltransferase 2 299 3.6E-139 T 13-10-2018 IPR033752 MetA family COP00_05265 cb81c341dbf01a60c1e55ce335007d99 302 PIRSF PIRSF000450 1 302 2.8E-148 T 13-10-2018 IPR033752 MetA family COP00_01460 9b5cf877c6417f4e5d9e6cd49ae24d82 294 SUPERFAMILY SSF52540 25 279 1.29E-49 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_01460 9b5cf877c6417f4e5d9e6cd49ae24d82 294 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 27 265 2.1E-18 T 13-10-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 COP00_01460 9b5cf877c6417f4e5d9e6cd49ae24d82 294 Gene3D G3DSA:3.40.50.300 26 266 2.8E-57 T 13-10-2018 COP00_01460 9b5cf877c6417f4e5d9e6cd49ae24d82 294 PIRSF PIRSF003092 1 293 3.6E-82 T 13-10-2018 IPR025501 ATP binding protein MinD COP00_14365 f843e4f523686eaf3c0c4ac199e9cab4 49 SUPERFAMILY SSF47406 8 36 1.31E-7 T 13-10-2018 IPR036281 SinR repressor/SinI anti-repressor, dimerisation domain superfamily GO:0006355|GO:0046983 COP00_14365 f843e4f523686eaf3c0c4ac199e9cab4 49 Pfam PF08671 Anti-repressor SinI 9 34 4.3E-11 T 13-10-2018 IPR010981 SinR repressor/SinI anti-repressor, dimerisation domain GO:0006355|GO:0046983 COP00_08275 bdf22f1c094096529283952c12cf430a 98 Pfam PF13797 Post-transcriptional regulator 7 87 1.2E-30 T 13-10-2018 IPR025716 Post-transcriptional regulator COP00_19285 cbc8ae113f380f0c60fc6101aae0a82e 198 Pfam PF02525 Flavodoxin-like fold 7 175 4.0E-44 T 13-10-2018 IPR003680 Flavodoxin-like fold COP00_19285 cbc8ae113f380f0c60fc6101aae0a82e 198 SUPERFAMILY SSF52218 7 179 3.19E-47 T 13-10-2018 IPR029039 Flavoprotein-like superfamily COP00_19285 cbc8ae113f380f0c60fc6101aae0a82e 198 Gene3D G3DSA:3.40.50.360 7 187 4.9E-54 T 13-10-2018 IPR029039 Flavoprotein-like superfamily COP00_10425 f8f8f29412473afdfbec469060265ee1 177 Pfam PF01066 CDP-alcohol phosphatidyltransferase 6 69 8.5E-16 T 13-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 COP00_10425 f8f8f29412473afdfbec469060265ee1 177 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 47 69 - T 13-10-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 COP00_10425 f8f8f29412473afdfbec469060265ee1 177 TIGRFAM TIGR00473 pssA: CDP-diacylglycerol-serine O-phosphatidyltransferase 11 163 7.8E-41 T 13-10-2018 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase KEGG: 00260+2.7.8.8|KEGG: 00564+2.7.8.8|MetaCyc: PWY-5669 COP00_10425 f8f8f29412473afdfbec469060265ee1 177 Gene3D G3DSA:1.20.120.1760 1 168 2.1E-14 T 13-10-2018 COP00_22020 7b7556a9d526ae0aba0d0b8ad401512a 361 Pfam PF14398 YheC/D like ATP-grasp 98 349 7.9E-69 T 13-10-2018 IPR026838 Endospore coat-associated protein YheC/D COP00_22020 7b7556a9d526ae0aba0d0b8ad401512a 361 SUPERFAMILY SSF56059 122 329 7.07E-17 T 13-10-2018 COP00_21400 6f518d5d4d536e9adab4e844c854844b 376 Hamap MF_01229 Alkanesulfonate monooxygenase [ssuD]. 1 371 77.149 T 13-10-2018 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent GO:0008726|GO:0055114 KEGG: 00920+1.14.14.5 COP00_21400 6f518d5d4d536e9adab4e844c854844b 376 SUPERFAMILY SSF51679 1 348 9.16E-102 T 13-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 COP00_21400 6f518d5d4d536e9adab4e844c854844b 376 Pfam PF00296 Luciferase-like monooxygenase 2 323 9.7E-90 T 13-10-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 COP00_21400 6f518d5d4d536e9adab4e844c854844b 376 Gene3D G3DSA:3.20.20.30 1 357 7.2E-148 T 13-10-2018 IPR036661 Luciferase-like domain superfamily GO:0016705|GO:0055114 COP00_21400 6f518d5d4d536e9adab4e844c854844b 376 TIGRFAM TIGR03565 alk_sulf_monoox: alkanesulfonate monooxygenase, FMNH(2)-dependent 2 347 2.3E-192 T 13-10-2018 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent GO:0008726|GO:0055114 KEGG: 00920+1.14.14.5 COP00_06930 f068f1cd6f9bf76192fffa21f585db76 314 Pfam PF01497 Periplasmic binding protein 62 290 5.1E-31 T 13-10-2018 IPR002491 ABC transporter periplasmic binding domain COP00_06930 f068f1cd6f9bf76192fffa21f585db76 314 Gene3D G3DSA:3.40.50.1980 29 158 1.2E-26 T 13-10-2018 COP00_06930 f068f1cd6f9bf76192fffa21f585db76 314 Gene3D G3DSA:3.40.50.1980 159 314 3.5E-63 T 13-10-2018 COP00_06930 f068f1cd6f9bf76192fffa21f585db76 314 SUPERFAMILY SSF53807 40 306 9.81E-58 T 13-10-2018 COP00_16955 ae09fed99187fb8aa7985eed9211ce83 455 Pfam PF00367 phosphotransferase system, EIIB 12 45 4.6E-11 T 13-10-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 COP00_16955 ae09fed99187fb8aa7985eed9211ce83 455 Gene3D G3DSA:3.30.1360.60 2 80 3.1E-20 T 13-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 COP00_16955 ae09fed99187fb8aa7985eed9211ce83 455 SUPERFAMILY SSF55604 10 83 1.96E-15 T 13-10-2018 IPR036878 Glucose permease domain IIB GO:0008982|GO:0009401 COP00_16955 ae09fed99187fb8aa7985eed9211ce83 455 Pfam PF02378 Phosphotransferase system, EIIC 120 389 3.6E-37 T 13-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 COP00_17105 b03dc3757489abe06e0d323463e3aaab 325 SUPERFAMILY SSF53474 46 322 1.02E-21 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold COP00_17105 b03dc3757489abe06e0d323463e3aaab 325 Pfam PF00561 alpha/beta hydrolase fold 92 180 3.0E-6 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 COP00_17105 b03dc3757489abe06e0d323463e3aaab 325 Gene3D G3DSA:3.40.50.1820 47 323 4.4E-29 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold COP00_13005 5be32a473c3d9f3b6d5d246110ba93ba 422 SUPERFAMILY SSF51261 238 420 6.8E-48 T 13-10-2018 IPR011055 Duplicated hybrid motif COP00_13005 5be32a473c3d9f3b6d5d246110ba93ba 422 Pfam PF01551 Peptidase family M23 312 416 5.6E-31 T 13-10-2018 IPR016047 Peptidase M23 COP00_13005 5be32a473c3d9f3b6d5d246110ba93ba 422 Gene3D G3DSA:2.70.70.10 245 421 1.4E-42 T 13-10-2018 IPR011055 Duplicated hybrid motif COP00_17310 5ee8781058abb807ccf5bf3bb70f08cd 108 Gene3D G3DSA:3.40.50.11170 3 106 2.4E-26 T 13-10-2018 IPR037236 STIV B116-like COP00_17310 5ee8781058abb807ccf5bf3bb70f08cd 108 Pfam PF08960 Domain of unknown function (DUF1874) 3 101 1.4E-27 T 13-10-2018 IPR015055 Protein of unknown function DUF1874 COP00_17310 5ee8781058abb807ccf5bf3bb70f08cd 108 SUPERFAMILY SSF143602 1 107 6.41E-29 T 13-10-2018 IPR037236 STIV B116-like COP00_05465 fa9fe8edff16f8357393b58c9510442c 198 Hamap MF_00130 Holliday junction resolvase RecU [recU]. 1 198 97.848 T 13-10-2018 IPR004612 Holliday junction resolvase RecU GO:0005737|GO:0006281|GO:0006310 COP00_05465 fa9fe8edff16f8357393b58c9510442c 198 Gene3D G3DSA:3.40.1350.10 31 198 3.0E-72 T 13-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 COP00_05465 fa9fe8edff16f8357393b58c9510442c 198 SUPERFAMILY SSF52980 31 194 1.53E-65 T 13-10-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 COP00_05465 fa9fe8edff16f8357393b58c9510442c 198 Pfam PF03838 Recombination protein U 28 191 4.8E-64 T 13-10-2018 IPR004612 Holliday junction resolvase RecU GO:0005737|GO:0006281|GO:0006310 COP00_05465 fa9fe8edff16f8357393b58c9510442c 198 PIRSF PIRSF037785 20 198 7.8E-75 T 13-10-2018 IPR004612 Holliday junction resolvase RecU GO:0005737|GO:0006281|GO:0006310 COP00_05465 fa9fe8edff16f8357393b58c9510442c 198 TIGRFAM TIGR00648 recU: recombination protein U 27 193 2.6E-85 T 13-10-2018 IPR004612 Holliday junction resolvase RecU GO:0005737|GO:0006281|GO:0006310 COP00_00145 4fb8559ed4db404d03150b9f13e24ed9 62 Pfam PF09953 Uncharacterized protein conserved in bacteria (DUF2187) 2 57 7.7E-29 T 13-10-2018 IPR018690 Protein of unknown function DUF2187 COP00_13790 9c86b6d02523639d38850135028385ff 77 Pfam PF06612 Protein of unknown function (DUF1146) 16 63 6.7E-21 T 13-10-2018 IPR009526 Protein of unknown function DUF1146 COP00_13790 9c86b6d02523639d38850135028385ff 77 TIGRFAM TIGR02327 int_mem_ywzB: conserved hypothetical integral membrane protein 10 76 1.7E-23 T 13-10-2018 IPR009526 Protein of unknown function DUF1146 COP00_15835 c99e6114df58a61b00384289a81cf53a 432 Gene3D G3DSA:1.20.1250.20 5 204 2.2E-45 T 13-10-2018 COP00_15835 c99e6114df58a61b00384289a81cf53a 432 SUPERFAMILY SSF103473 7 420 4.45E-80 T 13-10-2018 IPR036259 MFS transporter superfamily COP00_15835 c99e6114df58a61b00384289a81cf53a 432 Gene3D G3DSA:1.20.1250.20 224 424 1.5E-26 T 13-10-2018 COP00_15835 c99e6114df58a61b00384289a81cf53a 432 Pfam PF07690 Major Facilitator Superfamily 22 383 3.3E-57 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 COP00_01055 e0d9639254fbea10463f6d780bebb819 197 Hamap MF_00065 Adenylyl-sulfate kinase [cysC]. 24 196 39.556 T 13-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 COP00_01055 e0d9639254fbea10463f6d780bebb819 197 SUPERFAMILY SSF52540 22 194 4.04E-41 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_01055 e0d9639254fbea10463f6d780bebb819 197 Gene3D G3DSA:3.40.50.300 2 196 3.6E-80 T 13-10-2018 COP00_01055 e0d9639254fbea10463f6d780bebb819 197 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 8 192 1.0E-90 T 13-10-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 COP00_01055 e0d9639254fbea10463f6d780bebb819 197 Pfam PF01583 Adenylylsulphate kinase 26 180 4.2E-74 T 13-10-2018 COP00_21155 87abae7df6c495103e57dfd241af73d4 859 Pfam PF09586 Bacterial membrane protein YfhO 12 840 7.6E-191 T 13-10-2018 IPR018580 Uncharacterised protein family YfhO COP00_06590 b10adc319b8528039d2cc7d620f939d1 86 Pfam PF02609 Exonuclease VII small subunit 14 64 3.2E-20 T 13-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 COP00_06590 b10adc319b8528039d2cc7d620f939d1 86 SUPERFAMILY SSF116842 6 76 3.01E-21 T 13-10-2018 COP00_06590 b10adc319b8528039d2cc7d620f939d1 86 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 13 52 2.0E-14 T 13-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 COP00_06590 b10adc319b8528039d2cc7d620f939d1 86 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 13 68 7.7E-22 T 13-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 COP00_06590 b10adc319b8528039d2cc7d620f939d1 86 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 13 73 14.798 T 13-10-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 COP00_06590 b10adc319b8528039d2cc7d620f939d1 86 Gene3D G3DSA:1.10.287.1040 7 84 1.5E-21 T 13-10-2018 IPR037004 Exonuclease VII, small subunit superfamily GO:0006308|GO:0008855|GO:0009318 COP00_08440 24bb98902539d676174a16d7dec23bab 264 SUPERFAMILY SSF51261 176 233 1.7E-9 T 13-10-2018 IPR011055 Duplicated hybrid motif COP00_08440 24bb98902539d676174a16d7dec23bab 264 Pfam PF01551 Peptidase family M23 166 256 3.8E-14 T 13-10-2018 IPR016047 Peptidase M23 COP00_08440 24bb98902539d676174a16d7dec23bab 264 Gene3D G3DSA:2.70.70.10 133 263 5.2E-16 T 13-10-2018 IPR011055 Duplicated hybrid motif COP00_09355 66380ad35b57fb39b3570495752813c2 270 Pfam PF01618 MotA/TolQ/ExbB proton channel family 108 220 5.4E-23 T 13-10-2018 IPR002898 MotA/TolQ/ExbB proton channel COP00_09355 66380ad35b57fb39b3570495752813c2 270 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 190 207 - T 13-10-2018 IPR000540 Flagellar motor protein MotA, conserved site COP00_21360 0b5529f45151ad57b378e8d0f49f910d 171 Pfam PF13787 Protein of unknown function with HXXEE motif 9 120 5.5E-20 T 13-10-2018 IPR025671 Protein of unknown function with HXXEE motif COP00_04300 5fc0011c24d5fbe13c4707ea0a37c1c0 207 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 11 190 7.7E-35 T 13-10-2018 IPR003740 Uncharacterised membrane protein YitT COP00_23780 9420a69845a16ecc5c0cb7aa9573d001 236 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 15 207 4.0E-14 T 13-10-2018 IPR013830 SGNH hydrolase-type esterase domain COP00_23780 9420a69845a16ecc5c0cb7aa9573d001 236 Gene3D G3DSA:3.40.50.1110 11 233 1.1E-67 T 13-10-2018 IPR036514 SGNH hydrolase superfamily COP00_23780 9420a69845a16ecc5c0cb7aa9573d001 236 SUPERFAMILY SSF52266 11 227 1.83E-52 T 13-10-2018 COP00_16550 977a58503ea6697786fd1a1ad794bbe4 362 SUPERFAMILY SSF88723 162 290 2.28E-23 T 13-10-2018 IPR029060 PIN-like domain superfamily COP00_16550 977a58503ea6697786fd1a1ad794bbe4 362 SMART SM00670 162 269 9.9E-15 T 13-10-2018 IPR002716 PIN domain COP00_16550 977a58503ea6697786fd1a1ad794bbe4 362 Gene3D G3DSA:3.40.50.1010 158 293 1.1E-52 T 13-10-2018 COP00_00095 208d53a3845ba30086c3455cc574f12b 76 Pfam PF04688 SPP1 phage holin 8 74 2.7E-28 T 13-10-2018 IPR006479 Holin COP00_00095 208d53a3845ba30086c3455cc574f12b 76 ProDom PD008023 HOLIN TRANSMEMBRANE MEMBRANE PROPHAGE FAMILY BHLB SPP1 5'REGION HOLIN ORF050 9 72 5.0E-20 T 13-10-2018 IPR006479 Holin COP00_00095 208d53a3845ba30086c3455cc574f12b 76 TIGRFAM TIGR01592 holin_SPP1: holin, SPP1 family 9 74 4.0E-29 T 13-10-2018 IPR006479 Holin COP00_13015 62a8bb28309a465e623d8d835e7fd7f0 228 Pfam PF00005 ABC transporter 18 165 1.4E-36 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 COP00_13015 62a8bb28309a465e623d8d835e7fd7f0 228 SMART SM00382 27 221 3.8E-12 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_13015 62a8bb28309a465e623d8d835e7fd7f0 228 TIGRFAM TIGR02673 FtsE: cell division ATP-binding protein FtsE 1 213 3.0E-90 T 13-10-2018 IPR005286 Cell division protein FtsE, ATP-binding GO:0005524|GO:0051301 COP00_13015 62a8bb28309a465e623d8d835e7fd7f0 228 Gene3D G3DSA:3.40.50.300 1 226 1.7E-67 T 13-10-2018 COP00_13015 62a8bb28309a465e623d8d835e7fd7f0 228 SUPERFAMILY SSF52540 1 222 8.38E-72 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_13015 62a8bb28309a465e623d8d835e7fd7f0 228 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 COP00_11900 b73548549c36b4355e87b3a610800bdb 76 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 3 75 3.7E-23 T 13-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 COP00_11900 b73548549c36b4355e87b3a610800bdb 76 Pfam PF03840 Preprotein translocase SecG subunit 4 75 1.2E-22 T 13-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 COP00_11900 b73548549c36b4355e87b3a610800bdb 76 PRINTS PR01651 Protein-export SecG membrane protein signature 23 37 3.6E-11 T 13-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 COP00_11900 b73548549c36b4355e87b3a610800bdb 76 PRINTS PR01651 Protein-export SecG membrane protein signature 3 23 3.6E-11 T 13-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 COP00_11900 b73548549c36b4355e87b3a610800bdb 76 PRINTS PR01651 Protein-export SecG membrane protein signature 56 76 3.6E-11 T 13-10-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 COP00_18585 db987d2dd1862a66115e9b3df2eb4f01 317 SUPERFAMILY SSF81345 3 312 2.22E-67 T 13-10-2018 IPR037294 ABC transporter, BtuC-like COP00_18585 db987d2dd1862a66115e9b3df2eb4f01 317 Pfam PF01032 FecCD transport family 9 311 2.6E-66 T 13-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 COP00_18585 db987d2dd1862a66115e9b3df2eb4f01 317 Gene3D G3DSA:1.10.3470.10 1 315 6.3E-62 T 13-10-2018 IPR037294 ABC transporter, BtuC-like COP00_06400 23ae8f43b68ba71d6b7ebe1d5aeb9474 437 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 9 425 2.0E-169 T 13-10-2018 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 COP00_06400 23ae8f43b68ba71d6b7ebe1d5aeb9474 437 Pfam PF02378 Phosphotransferase system, EIIC 26 350 7.4E-65 T 13-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 COP00_06400 23ae8f43b68ba71d6b7ebe1d5aeb9474 437 TIGRFAM TIGR00359 cello_pts_IIC: PTS system, cellobiose-specific IIC component 9 425 2.0E-169 T 13-10-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 COP00_06400 23ae8f43b68ba71d6b7ebe1d5aeb9474 437 PIRSF PIRSF006351 1 433 5.9E-144 T 13-10-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 COP00_19395 db3385dd7f6af8675959033599f2b588 432 Pfam PF03600 Citrate transporter 13 377 3.0E-42 T 13-10-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 COP00_19395 db3385dd7f6af8675959033599f2b588 432 TIGRFAM TIGR00784 citMHS: citrate transporter 2 431 6.2E-235 T 13-10-2018 IPR014738 Citrate transporter GO:0015137|GO:0015746 COP00_22155 4e11769b23198f3d3150694bfdbb524a 175 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 1 174 2.0E-65 T 13-10-2018 COP00_22155 4e11769b23198f3d3150694bfdbb524a 175 Pfam PF17099 Tryptophan transporter TrpP 2 166 4.7E-58 T 13-10-2018 IPR031360 Tryptophan transporter TrpP COP00_21760 80e277ec91ce49799987ccfdf4d8674a 120 SUPERFAMILY SSF51161 6 101 4.16E-24 T 13-10-2018 IPR011004 Trimeric LpxA-like superfamily COP00_21760 80e277ec91ce49799987ccfdf4d8674a 120 Gene3D G3DSA:2.160.10.10 3 114 9.8E-25 T 13-10-2018 COP00_21760 80e277ec91ce49799987ccfdf4d8674a 120 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 49 82 6.4E-6 T 13-10-2018 IPR001451 Hexapeptide repeat COP00_21760 80e277ec91ce49799987ccfdf4d8674a 120 PIRSF PIRSF000441 1 118 4.9E-31 T 13-10-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|KEGG: 00999+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274|MetaCyc: PWY-7870 COP00_13640 06d5e3a97192d2dec529daddd4e47348 202 Pfam PF04542 Sigma-70 region 2 7 64 1.1E-8 T 13-10-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003700|GO:0006352|GO:0006355 COP00_13640 06d5e3a97192d2dec529daddd4e47348 202 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 6 143 8.2E-17 T 13-10-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003700|GO:0006352|GO:0006355 COP00_13640 06d5e3a97192d2dec529daddd4e47348 202 Pfam PF08281 Sigma-70, region 4 91 140 1.3E-9 T 13-10-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 COP00_13640 06d5e3a97192d2dec529daddd4e47348 202 Gene3D G3DSA:1.10.10.10 83 151 3.8E-11 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_13640 06d5e3a97192d2dec529daddd4e47348 202 SUPERFAMILY SSF88659 84 144 8.04E-10 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like COP00_13640 06d5e3a97192d2dec529daddd4e47348 202 SUPERFAMILY SSF88946 6 68 9.02E-10 T 13-10-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003700|GO:0006352|GO:0006355 COP00_13640 06d5e3a97192d2dec529daddd4e47348 202 Gene3D G3DSA:1.10.1740.10 3 66 3.0E-7 T 13-10-2018 COP00_13600 b66919b34728d0b2342934987c0b01ef 241 SUPERFAMILY SSF160104 3 169 9.55E-20 T 13-10-2018 IPR023375 Acetoacetate decarboxylase domain superfamily KEGG: 00072+4.1.1.4|KEGG: 00640+4.1.1.4|MetaCyc: PWY-5451|MetaCyc: PWY-6588|MetaCyc: PWY-6876|MetaCyc: PWY-7466 COP00_13600 b66919b34728d0b2342934987c0b01ef 241 Pfam PF09844 Uncharacterized conserved protein (COG2071) 21 229 2.0E-72 T 13-10-2018 IPR018644 Protein of unknown function DUF2071 COP00_18880 085d33c44b61ab43d7b8add3a38a8d7b 185 Gene3D G3DSA:3.40.630.30 2 177 1.0E-51 T 13-10-2018 COP00_18880 085d33c44b61ab43d7b8add3a38a8d7b 185 SUPERFAMILY SSF55729 5 175 1.87E-46 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase COP00_18880 085d33c44b61ab43d7b8add3a38a8d7b 185 Pfam PF13302 Acetyltransferase (GNAT) domain 10 150 2.5E-24 T 13-10-2018 IPR000182 GNAT domain COP00_11910 e12fa3e532d3ca7756c15125eed281bf 61 SMART SM00530 1 51 1.0E-4 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 COP00_11910 e12fa3e532d3ca7756c15125eed281bf 61 Pfam PF01381 Helix-turn-helix 3 51 6.7E-11 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 COP00_11910 e12fa3e532d3ca7756c15125eed281bf 61 SUPERFAMILY SSF47413 2 57 4.96E-11 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 COP00_11910 e12fa3e532d3ca7756c15125eed281bf 61 Gene3D G3DSA:1.10.260.40 1 61 7.5E-9 T 13-10-2018 COP00_09910 1b7ce6e3e112f7c1bd64108a95d85260 474 TIGRFAM TIGR00543 isochor_syn: isochorismate synthase 117 468 9.7E-111 T 13-10-2018 IPR004561 Isochorismate synthase GO:0008909|GO:0009058 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 COP00_09910 1b7ce6e3e112f7c1bd64108a95d85260 474 Gene3D G3DSA:3.60.120.10 6 472 4.5E-109 T 13-10-2018 IPR005801 ADC synthase GO:0009058 COP00_09910 1b7ce6e3e112f7c1bd64108a95d85260 474 SUPERFAMILY SSF56322 51 470 1.57E-99 T 13-10-2018 IPR005801 ADC synthase GO:0009058 COP00_09910 1b7ce6e3e112f7c1bd64108a95d85260 474 Pfam PF00425 chorismate binding enzyme 210 461 3.5E-73 T 13-10-2018 IPR015890 Chorismate-utilising enzyme, C-terminal COP00_09910 1b7ce6e3e112f7c1bd64108a95d85260 474 Hamap MF_01935 Isochorismate synthase MenF [menF]. 5 471 30.683 T 13-10-2018 IPR034681 Isochorismate synthase MenF GO:0008909|GO:0009234 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 COP00_14545 f711a28cd1b7a1af2a4849d819dd8316 385 Pfam PF03062 MBOAT, membrane-bound O-acyltransferase family 141 353 3.3E-15 T 13-10-2018 IPR004299 Membrane bound O-acyl transferase, MBOAT COP00_14545 f711a28cd1b7a1af2a4849d819dd8316 385 PIRSF PIRSF016636 2 384 8.9E-79 T 13-10-2018 IPR024194 Alginate O-acetyltransferase AlgI/D-alanyl transfer protein DltB COP00_14545 f711a28cd1b7a1af2a4849d819dd8316 385 TIGRFAM TIGR04091 LTA_dltB: D-alanyl-lipoteichoic acid biosynthesis protein DltB 3 383 9.4E-162 T 13-10-2018 IPR024024 D-alanyl transfer protein DltB COP00_14545 f711a28cd1b7a1af2a4849d819dd8316 385 PIRSF PIRSF500216 1 385 8.0E-168 T 13-10-2018 IPR024024 D-alanyl transfer protein DltB COP00_06145 dd4392be65a2106c43db728cab84ab8f 152 SUPERFAMILY SSF55729 2 147 4.61E-30 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase COP00_06145 dd4392be65a2106c43db728cab84ab8f 152 Gene3D G3DSA:3.40.630.30 1 146 5.6E-41 T 13-10-2018 COP00_06145 dd4392be65a2106c43db728cab84ab8f 152 Pfam PF13673 Acetyltransferase (GNAT) domain 36 146 3.0E-18 T 13-10-2018 IPR000182 GNAT domain COP00_03950 d6ce9dce7bcda937c0d14e55b0cc3649 356 Pfam PF16113 Enoyl-CoA hydratase/isomerase 15 345 1.3E-115 T 13-10-2018 IPR032259 Enoyl-CoA hydratase/isomerase, HIBYL-CoA-H type GO:0003860 Reactome: R-HSA-70895 COP00_03950 d6ce9dce7bcda937c0d14e55b0cc3649 356 SUPERFAMILY SSF52096 2 324 1.44E-58 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily COP00_03950 d6ce9dce7bcda937c0d14e55b0cc3649 356 Gene3D G3DSA:3.90.226.10 4 356 7.0E-113 T 13-10-2018 COP00_07255 27b6ec19770097b48df5d6bfdca98df2 93 Pfam PF07873 YabP family 27 90 3.9E-17 T 13-10-2018 IPR022476 Sporulation protein YabP/YqfC COP00_07255 27b6ec19770097b48df5d6bfdca98df2 93 TIGRFAM TIGR02856 spore_yqfC: sporulation protein YqfC 9 91 2.6E-36 T 13-10-2018 IPR022477 Sporulation protein YqfC COP00_02915 402c31ca6a5751fa12bcc3692579068e 72 SUPERFAMILY SSF159038 1 63 1.28E-15 T 13-10-2018 IPR038027 YorP domain superfamily COP00_02915 402c31ca6a5751fa12bcc3692579068e 72 Gene3D G3DSA:2.30.30.40 11 65 3.7E-31 T 13-10-2018 COP00_02915 402c31ca6a5751fa12bcc3692579068e 72 Pfam PF09629 YorP protein 1 63 6.3E-17 T 13-10-2018 IPR018591 YorP protein COP00_13420 499562267c0666cfa553b5eac877f856 304 Gene3D G3DSA:3.40.50.2300 137 270 1.0E-91 T 13-10-2018 COP00_13420 499562267c0666cfa553b5eac877f856 304 Pfam PF13407 Periplasmic binding protein domain 39 289 3.3E-64 T 13-10-2018 IPR025997 Periplasmic binding protein COP00_13420 499562267c0666cfa553b5eac877f856 304 Gene3D G3DSA:3.40.50.2300 43 289 1.0E-91 T 13-10-2018 COP00_13420 499562267c0666cfa553b5eac877f856 304 SUPERFAMILY SSF53822 33 300 1.15E-87 T 13-10-2018 IPR028082 Periplasmic binding protein-like I COP00_14455 85243b1461d29f73ff5565f58b4320af 321 SUPERFAMILY SSF52283 16 138 1.02E-30 T 13-10-2018 COP00_14455 85243b1461d29f73ff5565f58b4320af 321 Gene3D G3DSA:3.40.50.720 21 301 7.4E-102 T 13-10-2018 COP00_14455 85243b1461d29f73ff5565f58b4320af 321 SUPERFAMILY SSF51735 106 284 4.63E-55 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily COP00_14455 85243b1461d29f73ff5565f58b4320af 321 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 29 314 9.3E-27 T 13-10-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0016616|GO:0051287|GO:0055114 COP00_14455 85243b1461d29f73ff5565f58b4320af 321 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 112 283 6.5E-60 T 13-10-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 COP00_14455 85243b1461d29f73ff5565f58b4320af 321 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 224 240 - T 13-10-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site COP00_14455 85243b1461d29f73ff5565f58b4320af 321 Gene3D G3DSA:3.40.50.720 99 285 7.4E-102 T 13-10-2018 COP00_21130 e16df8dd62a62798e37584c839dbca74 49 TIGRFAM TIGR03091 SASP_sspK: small, acid-soluble spore protein K 16 47 3.3E-23 T 13-10-2018 IPR012611 Small acid-soluble spore protein, SspK GO:0030436|GO:0042601 COP00_21130 e16df8dd62a62798e37584c839dbca74 49 Hamap MF_01504 Small, acid-soluble spore protein K [sspK]. 1 49 18.445 T 13-10-2018 IPR012611 Small acid-soluble spore protein, SspK GO:0030436|GO:0042601 COP00_21130 e16df8dd62a62798e37584c839dbca74 49 Pfam PF08176 Small acid-soluble spore protein K family 1 47 1.5E-29 T 13-10-2018 IPR012611 Small acid-soluble spore protein, SspK GO:0030436|GO:0042601 COP00_11420 d03e61b593fc45e7e46851a6fc899a8f 286 Pfam PF00950 ABC 3 transport family 10 264 4.1E-83 T 13-10-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 COP00_11420 d03e61b593fc45e7e46851a6fc899a8f 286 SUPERFAMILY SSF81345 7 258 2.35E-44 T 13-10-2018 IPR037294 ABC transporter, BtuC-like COP00_11420 d03e61b593fc45e7e46851a6fc899a8f 286 Gene3D G3DSA:1.10.3470.10 36 262 1.7E-6 T 13-10-2018 IPR037294 ABC transporter, BtuC-like COP00_12640 405978a5a6e162060777d675162ba39a 109 SUPERFAMILY SSF47413 3 66 5.07E-9 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 COP00_12640 405978a5a6e162060777d675162ba39a 109 Pfam PF12844 Helix-turn-helix domain 5 64 1.9E-8 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 COP00_12640 405978a5a6e162060777d675162ba39a 109 SMART SM00530 6 59 2.4E-5 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 COP00_12640 405978a5a6e162060777d675162ba39a 109 Gene3D G3DSA:1.10.260.40 5 109 1.9E-16 T 13-10-2018 COP00_19880 23661675265ccfeee2ca3adfee376c64 155 Pfam PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) 30 134 7.4E-7 T 13-10-2018 IPR019076 Sporulation lipoprotein YhcN/YlaJ-like COP00_00395 833f02fd84ccfd08d609d4536b63221d 178 SUPERFAMILY SSF52540 5 136 3.95E-14 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_00395 833f02fd84ccfd08d609d4536b63221d 178 TIGRFAM TIGR00176 mobB: molybdopterin-guanine dinucleotide biosynthesis protein B 7 160 1.5E-24 T 13-10-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 COP00_00395 833f02fd84ccfd08d609d4536b63221d 178 Pfam PF03205 Molybdopterin guanine dinucleotide synthesis protein B 7 136 7.9E-28 T 13-10-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 COP00_00395 833f02fd84ccfd08d609d4536b63221d 178 Gene3D G3DSA:3.40.50.300 5 171 1.5E-52 T 13-10-2018 COP00_04210 771fe2af153a119d23aa48bc937f8802 260 Gene3D G3DSA:1.10.12.10 202 260 7.2E-27 T 13-10-2018 IPR014748 Enoyl-CoA hydratase, C-terminal COP00_04210 771fe2af153a119d23aa48bc937f8802 260 Pfam PF00378 Enoyl-CoA hydratase/isomerase 11 259 1.9E-68 T 13-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 COP00_04210 771fe2af153a119d23aa48bc937f8802 260 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 101 121 - T 13-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 COP00_04210 771fe2af153a119d23aa48bc937f8802 260 SUPERFAMILY SSF52096 6 259 1.81E-85 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily COP00_04210 771fe2af153a119d23aa48bc937f8802 260 Gene3D G3DSA:3.90.226.10 4 201 6.1E-73 T 13-10-2018 COP00_06755 1710ed866c795d81abd73d744f0edd70 264 TIGRFAM TIGR04088 cognate_SipW: SipW-cognate class signal peptide 11 44 7.3E-9 T 13-10-2018 IPR023833 Signal peptide, camelysin COP00_06755 1710ed866c795d81abd73d744f0edd70 264 Pfam PF12389 Camelysin metallo-endopeptidase 4 238 2.1E-37 T 13-10-2018 IPR022121 Peptidase M73, camelysin COP00_06635 fdbced81cd2d425d0884c47a1dd756f2 209 Pfam PF09581 Stage III sporulation protein AF (Spore_III_AF) 12 198 6.1E-40 T 13-10-2018 IPR014245 Sporulation stage III, protein AF COP00_06635 fdbced81cd2d425d0884c47a1dd756f2 209 TIGRFAM TIGR02896 spore_III_AF: stage III sporulation protein AF 3 111 1.2E-36 T 13-10-2018 IPR014245 Sporulation stage III, protein AF COP00_14760 b1eecd0d4bfc2a54eb6e6067532ea8ac 129 Pfam PF07485 Domain of Unknown Function (DUF1259) 10 126 1.4E-25 T 13-10-2018 IPR011094 Uncharacterised protein family, LppY/LpqO COP00_20350 43a04fb95b97bf8e18b64c531a34b211 317 Gene3D G3DSA:3.90.245.10 2 313 1.0E-97 T 13-10-2018 IPR036452 Ribonucleoside hydrolase-like COP00_20350 43a04fb95b97bf8e18b64c531a34b211 317 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 5 301 1.6E-44 T 13-10-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain COP00_20350 43a04fb95b97bf8e18b64c531a34b211 317 SUPERFAMILY SSF53590 2 309 2.88E-81 T 13-10-2018 IPR036452 Ribonucleoside hydrolase-like COP00_13090 4fe20d43c27c02a83e3fd51544b2bd39 305 SUPERFAMILY SSF64518 1 304 3.27E-69 T 13-10-2018 COP00_13090 4fe20d43c27c02a83e3fd51544b2bd39 305 Pfam PF00669 Bacterial flagellin N-terminal helical region 7 139 6.1E-22 T 13-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 COP00_13090 4fe20d43c27c02a83e3fd51544b2bd39 305 Pfam PF00700 Bacterial flagellin C-terminal helical region 222 304 1.3E-7 T 13-10-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 COP00_13090 4fe20d43c27c02a83e3fd51544b2bd39 305 TIGRFAM TIGR02550 flagell_flgL: flagellar hook-associated protein 3 2 167 7.0E-55 T 13-10-2018 IPR013384 Flagellar hook-associated protein 3 GO:0009424|GO:0071973 COP00_13090 4fe20d43c27c02a83e3fd51544b2bd39 305 Gene3D G3DSA:1.20.1330.10 40 251 1.5E-46 T 13-10-2018 COP00_23830 13c7d61d8d0d7a4378100d95ee0379c4 317 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 105 311 1.8E-19 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 COP00_23830 13c7d61d8d0d7a4378100d95ee0379c4 317 SUPERFAMILY SSF161098 73 301 5.89E-49 T 13-10-2018 IPR035906 MetI-like superfamily COP00_23830 13c7d61d8d0d7a4378100d95ee0379c4 317 Gene3D G3DSA:1.10.3720.10 69 317 1.3E-59 T 13-10-2018 IPR035906 MetI-like superfamily COP00_01115 c96f8a47eb305d10bdc7427f3805716f 160 PRINTS PR01576 Peptide deformylase signature 100 118 2.1E-35 T 13-10-2018 IPR023635 Peptide deformylase COP00_01115 c96f8a47eb305d10bdc7427f3805716f 160 PRINTS PR01576 Peptide deformylase signature 33 62 2.1E-35 T 13-10-2018 IPR023635 Peptide deformylase COP00_01115 c96f8a47eb305d10bdc7427f3805716f 160 PRINTS PR01576 Peptide deformylase signature 119 148 2.1E-35 T 13-10-2018 IPR023635 Peptide deformylase COP00_01115 c96f8a47eb305d10bdc7427f3805716f 160 PRINTS PR01576 Peptide deformylase signature 88 99 2.1E-35 T 13-10-2018 IPR023635 Peptide deformylase COP00_01115 c96f8a47eb305d10bdc7427f3805716f 160 Gene3D G3DSA:3.90.45.10 1 156 3.0E-59 T 13-10-2018 IPR036821 Peptide deformylase superfamily COP00_01115 c96f8a47eb305d10bdc7427f3805716f 160 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 5 158 3.6E-53 T 13-10-2018 IPR023635 Peptide deformylase COP00_01115 c96f8a47eb305d10bdc7427f3805716f 160 Hamap MF_00163 Peptide deformylase [def]. 2 158 29.622 T 13-10-2018 IPR023635 Peptide deformylase COP00_01115 c96f8a47eb305d10bdc7427f3805716f 160 Pfam PF01327 Polypeptide deformylase 3 148 1.1E-49 T 13-10-2018 IPR023635 Peptide deformylase COP00_01115 c96f8a47eb305d10bdc7427f3805716f 160 PIRSF PIRSF004749 1 159 5.1E-50 T 13-10-2018 IPR023635 Peptide deformylase COP00_01115 c96f8a47eb305d10bdc7427f3805716f 160 SUPERFAMILY SSF56420 2 153 6.54E-55 T 13-10-2018 IPR036821 Peptide deformylase superfamily COP00_19965 d515380c4db7c46729d4d1fd20f9f827 422 ProSitePatterns PS00217 Sugar transport proteins signature 2. 109 134 - T 13-10-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 COP00_19965 d515380c4db7c46729d4d1fd20f9f827 422 Gene3D G3DSA:1.20.1250.20 9 421 9.8E-61 T 13-10-2018 COP00_19965 d515380c4db7c46729d4d1fd20f9f827 422 Pfam PF00083 Sugar (and other) transporter 54 415 1.5E-29 T 13-10-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 COP00_19965 d515380c4db7c46729d4d1fd20f9f827 422 SUPERFAMILY SSF103473 9 416 1.44E-63 T 13-10-2018 IPR036259 MFS transporter superfamily COP00_14080 8827dad825567721fa44253ae48e9f23 268 Gene3D G3DSA:3.40.390.10 90 265 6.0E-15 T 13-10-2018 IPR024079 Metallopeptidase, catalytic domain superfamily GO:0008237 COP00_14080 8827dad825567721fa44253ae48e9f23 268 Pfam PF13688 Metallo-peptidase family M12 100 245 1.6E-26 T 13-10-2018 COP00_14080 8827dad825567721fa44253ae48e9f23 268 SUPERFAMILY SSF55486 102 253 6.07E-20 T 13-10-2018 COP00_23960 fc8e93550e6e4ecc55916a60649a1a5b 149 SUPERFAMILY SSF46785 8 139 2.05E-34 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_23960 fc8e93550e6e4ecc55916a60649a1a5b 149 SMART SM00347 31 131 2.1E-25 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 COP00_23960 fc8e93550e6e4ecc55916a60649a1a5b 149 PRINTS PR00598 Bacterial regulatory protein MarR family signature 55 71 4.6E-7 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 COP00_23960 fc8e93550e6e4ecc55916a60649a1a5b 149 PRINTS PR00598 Bacterial regulatory protein MarR family signature 91 107 4.6E-7 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 COP00_23960 fc8e93550e6e4ecc55916a60649a1a5b 149 PRINTS PR00598 Bacterial regulatory protein MarR family signature 72 87 4.6E-7 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 COP00_23960 fc8e93550e6e4ecc55916a60649a1a5b 149 Pfam PF01047 MarR family 38 96 3.6E-19 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 COP00_23960 fc8e93550e6e4ecc55916a60649a1a5b 149 Gene3D G3DSA:1.10.10.10 1 147 2.8E-39 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_22280 4dafa2b1407015c72cd5d9270c26fd90 238 Pfam PF03591 AzlC protein 18 154 3.2E-39 T 13-10-2018 IPR011606 Branched-chain amino acid transport, permease COP00_14580 a4a8d03f2278528dd6eeb8033f92d668 450 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 12 435 3.3E-198 T 13-10-2018 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 COP00_14580 a4a8d03f2278528dd6eeb8033f92d668 450 PIRSF PIRSF006351 1 445 2.9E-151 T 13-10-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 COP00_14580 a4a8d03f2278528dd6eeb8033f92d668 450 TIGRFAM TIGR00359 cello_pts_IIC: PTS system, cellobiose-specific IIC component 12 435 3.3E-198 T 13-10-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 COP00_14580 a4a8d03f2278528dd6eeb8033f92d668 450 Pfam PF02378 Phosphotransferase system, EIIC 29 359 2.8E-74 T 13-10-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 COP00_20050 375ace94ce4d5c9be9b7568eae596105 283 SUPERFAMILY SSF161098 15 283 5.89E-62 T 13-10-2018 IPR035906 MetI-like superfamily COP00_20050 375ace94ce4d5c9be9b7568eae596105 283 Gene3D G3DSA:1.10.3720.10 7 270 3.9E-56 T 13-10-2018 IPR035906 MetI-like superfamily COP00_20050 375ace94ce4d5c9be9b7568eae596105 283 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 99 276 7.7E-23 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 COP00_09705 759c6364216ef974abeb8584f2125ce3 359 Pfam PF10776 Protein of unknown function (DUF2600) 20 348 4.5E-149 T 13-10-2018 IPR019712 Protein of unknown function DUF2600 COP00_21635 6b00778fb252805b8f5e6845cc9036b6 141 SUPERFAMILY SSF54631 3 117 2.65E-37 T 13-10-2018 COP00_21635 6b00778fb252805b8f5e6845cc9036b6 141 Pfam PF00571 CBS domain 68 118 3.9E-12 T 13-10-2018 IPR000644 CBS domain COP00_21635 6b00778fb252805b8f5e6845cc9036b6 141 Pfam PF00571 CBS domain 4 53 1.1E-14 T 13-10-2018 IPR000644 CBS domain COP00_21635 6b00778fb252805b8f5e6845cc9036b6 141 Gene3D G3DSA:3.10.580.10 1 140 1.8E-39 T 13-10-2018 COP00_21635 6b00778fb252805b8f5e6845cc9036b6 141 SMART SM00116 75 122 7.0E-13 T 13-10-2018 IPR000644 CBS domain COP00_21635 6b00778fb252805b8f5e6845cc9036b6 141 SMART SM00116 11 58 1.1E-14 T 13-10-2018 IPR000644 CBS domain COP00_14375 309afc771ff0f324b56f6cb3afaca85e 186 Gene3D G3DSA:3.40.50.360 1 180 4.5E-41 T 13-10-2018 IPR029039 Flavoprotein-like superfamily COP00_14375 309afc771ff0f324b56f6cb3afaca85e 186 SUPERFAMILY SSF52218 1 183 4.19E-30 T 13-10-2018 IPR029039 Flavoprotein-like superfamily COP00_14375 309afc771ff0f324b56f6cb3afaca85e 186 Pfam PF03358 NADPH-dependent FMN reductase 1 129 3.6E-20 T 13-10-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 COP00_02295 a15fb997051e09e41752c2d1c2e9028b 464 TIGRFAM TIGR01760 tape_meas_TP901: phage tail tape measure protein, TP901 family, core region 348 464 9.8E-26 T 13-10-2018 IPR010090 Phage tail tape measure protein COP00_15585 fd3a2997d89451257703b6b762b2752f 134 SUPERFAMILY SSF103642 113 132 2.62E-8 T 13-10-2018 COP00_15585 fd3a2997d89451257703b6b762b2752f 134 Gene3D G3DSA:3.10.450.50 66 133 2.2E-10 T 13-10-2018 COP00_15585 fd3a2997d89451257703b6b762b2752f 134 Pfam PF02810 SEC-C motif 115 132 7.9E-11 T 13-10-2018 IPR004027 SEC-C motif COP00_21795 aa39cbf3d3bea04824c1661b86235dd7 452 ProSitePatterns PS00610 Sodium:neurotransmitter symporter family signature 1. 31 45 - T 13-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 COP00_21795 aa39cbf3d3bea04824c1661b86235dd7 452 Pfam PF00209 Sodium:neurotransmitter symporter family 153 447 2.2E-27 T 13-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 COP00_21795 aa39cbf3d3bea04824c1661b86235dd7 452 Pfam PF00209 Sodium:neurotransmitter symporter family 9 125 7.7E-26 T 13-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 COP00_21795 aa39cbf3d3bea04824c1661b86235dd7 452 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 44 63 8.0E-12 T 13-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 COP00_21795 aa39cbf3d3bea04824c1661b86235dd7 452 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 90 116 8.0E-12 T 13-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 COP00_21795 aa39cbf3d3bea04824c1661b86235dd7 452 PRINTS PR00176 Sodium/chloride neurotransmitter symporter signature 15 36 8.0E-12 T 13-10-2018 IPR000175 Sodium:neurotransmitter symporter GO:0005328|GO:0006836|GO:0016021 COP00_21795 aa39cbf3d3bea04824c1661b86235dd7 452 SUPERFAMILY SSF161070 9 447 2.48E-126 T 13-10-2018 IPR037272 Sodium:neurotransmitter symporter superfamily GO:0005328 COP00_23710 5280b8041ac91a61e40571c1841d7ced 205 Gene3D G3DSA:1.20.58.220 9 205 5.8E-54 T 13-10-2018 IPR038078 PhoU-like domain superfamily COP00_23710 5280b8041ac91a61e40571c1841d7ced 205 SUPERFAMILY SSF109755 12 196 4.06E-6 T 13-10-2018 COP00_23710 5280b8041ac91a61e40571c1841d7ced 205 Pfam PF01865 Protein of unknown function DUF47 8 202 9.2E-23 T 13-10-2018 IPR018445 Putative phosphate transport regulator COP00_22495 f56c01b44cb7153045941f6dbf4cb150 58 PIRSF PIRSF037666 1 58 1.6E-34 T 13-10-2018 IPR017257 Spore germination protein GerPD, predicted COP00_18310 22c749766ad1005fced537d1ff222297 260 Pfam PF00756 Putative esterase 14 245 4.7E-26 T 13-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 COP00_18310 22c749766ad1005fced537d1ff222297 260 Gene3D G3DSA:3.40.50.1820 7 259 7.4E-50 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold COP00_18310 22c749766ad1005fced537d1ff222297 260 SUPERFAMILY SSF53474 13 247 2.01E-41 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold COP00_05575 bd737d0ed993eafe21db08a40d737674 194 Pfam PF07187 Protein of unknown function (DUF1405) 24 181 6.9E-59 T 13-10-2018 IPR009845 Protein of unknown function DUF1405 COP00_04935 352876e88d82323a526fb792178cc97f 452 PIRSF PIRSF006603 1 449 5.9E-66 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 COP00_04935 352876e88d82323a526fb792178cc97f 452 Pfam PF01554 MatE 20 179 1.0E-34 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 COP00_04935 352876e88d82323a526fb792178cc97f 452 Pfam PF01554 MatE 247 408 1.8E-36 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 COP00_04935 352876e88d82323a526fb792178cc97f 452 TIGRFAM TIGR00797 matE: MATE efflux family protein 20 421 1.0E-106 T 13-10-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 COP00_19795 477b8fe65efe6e0ec21fcd4b569adb2a 549 Pfam PF14449 Pre-toxin TG 262 328 9.3E-17 T 13-10-2018 IPR027797 Pre-toxin TG domain COP00_19795 477b8fe65efe6e0ec21fcd4b569adb2a 549 Pfam PF04740 LXG domain of WXG superfamily 2 201 3.2E-46 T 13-10-2018 IPR006829 LXG domain COP00_18815 ce7d9a49c8c61ca17b2159abf2b786f3 136 Gene3D G3DSA:1.20.1290.10 41 136 1.3E-7 T 13-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 COP00_18815 ce7d9a49c8c61ca17b2159abf2b786f3 136 SUPERFAMILY SSF69118 12 135 5.23E-22 T 13-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 COP00_10750 3a948d80afe88030e9bdd223f35fabfd 79 Gene3D G3DSA:3.30.300.130 2 79 3.5E-33 T 13-10-2018 IPR034904 Fe-S cluster assembly domain superfamily COP00_10750 3a948d80afe88030e9bdd223f35fabfd 79 SUPERFAMILY SSF117916 4 78 3.92E-27 T 13-10-2018 IPR034904 Fe-S cluster assembly domain superfamily COP00_10750 3a948d80afe88030e9bdd223f35fabfd 79 Pfam PF01106 NifU-like domain 11 76 3.3E-28 T 13-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 COP00_10750 3a948d80afe88030e9bdd223f35fabfd 79 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 15 78 3.0E-29 T 13-10-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 COP00_05880 70ea835b9ff2397120f5310fe29256bf 280 Pfam PF01522 Polysaccharide deacetylase 78 183 1.3E-26 T 13-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 COP00_05880 70ea835b9ff2397120f5310fe29256bf 280 Gene3D G3DSA:3.20.20.370 40 275 2.4E-54 T 13-10-2018 COP00_05880 70ea835b9ff2397120f5310fe29256bf 280 SUPERFAMILY SSF88713 80 273 3.46E-47 T 13-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 COP00_04840 1fcfb3b10797441db8f18760fb11acbf 58 Pfam PF13217 Protein of unknown function (DUF4025) 28 55 3.9E-8 T 13-10-2018 IPR025100 Protein of unknown function DUF4025 COP00_22915 b1fcc35caaf68df245caeac97937d1d0 132 Gene3D G3DSA:1.10.490.10 1 132 9.4E-56 T 13-10-2018 IPR012292 Globin/Protoglobin GO:0019825|GO:0020037 COP00_22915 b1fcc35caaf68df245caeac97937d1d0 132 ProSitePatterns PS01213 Protozoan/cyanobacterial globins signature. 52 76 - T 13-10-2018 IPR019795 Globin, bacterial-like, conserved site GO:0015671|GO:0019825 COP00_22915 b1fcc35caaf68df245caeac97937d1d0 132 SUPERFAMILY SSF46458 8 124 1.31E-39 T 13-10-2018 IPR009050 Globin-like superfamily COP00_22915 b1fcc35caaf68df245caeac97937d1d0 132 Pfam PF01152 Bacterial-like globin 9 122 7.7E-32 T 13-10-2018 IPR001486 Truncated hemoglobin GO:0019825 COP00_23250 106068e6d460d188429816cbccbbb8f8 256 SUPERFAMILY SSF50685 196 236 1.67E-7 T 13-10-2018 IPR036908 RlpA-like domain superfamily COP00_23250 106068e6d460d188429816cbccbbb8f8 256 SUPERFAMILY SSF54106 80 122 9.68E-12 T 13-10-2018 COP00_23250 106068e6d460d188429816cbccbbb8f8 256 Pfam PF06725 3D domain 195 255 1.4E-19 T 13-10-2018 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 COP00_23250 106068e6d460d188429816cbccbbb8f8 256 SMART SM00257 27 70 1.2E-13 T 13-10-2018 IPR018392 LysM domain COP00_23250 106068e6d460d188429816cbccbbb8f8 256 SMART SM00257 80 123 4.4E-15 T 13-10-2018 IPR018392 LysM domain COP00_23250 106068e6d460d188429816cbccbbb8f8 256 Pfam PF01476 LysM domain 30 69 3.4E-13 T 13-10-2018 IPR018392 LysM domain COP00_23250 106068e6d460d188429816cbccbbb8f8 256 Pfam PF01476 LysM domain 81 120 2.2E-14 T 13-10-2018 IPR018392 LysM domain COP00_23250 106068e6d460d188429816cbccbbb8f8 256 Gene3D G3DSA:3.10.350.10 26 77 6.5E-17 T 13-10-2018 IPR036779 LysM domain superfamily COP00_23250 106068e6d460d188429816cbccbbb8f8 256 Gene3D G3DSA:3.10.350.10 78 127 1.7E-19 T 13-10-2018 IPR036779 LysM domain superfamily COP00_23250 106068e6d460d188429816cbccbbb8f8 256 SUPERFAMILY SSF54106 28 69 4.84E-11 T 13-10-2018 COP00_17500 e592969fa2b2cf7e6c048d99895f681c 151 SUPERFAMILY SSF46785 34 145 1.9E-19 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_17500 e592969fa2b2cf7e6c048d99895f681c 151 Pfam PF12802 MarR family 37 95 1.1E-7 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 COP00_17500 e592969fa2b2cf7e6c048d99895f681c 151 SMART SM00347 29 131 1.1E-17 T 13-10-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 COP00_17500 e592969fa2b2cf7e6c048d99895f681c 151 Gene3D G3DSA:1.10.10.10 4 149 4.3E-23 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_10980 f743bdab703a9fee135616ec1c55c6f4 277 Pfam PF03180 NLPA lipoprotein 35 274 4.6E-89 T 13-10-2018 IPR004872 Lipoprotein NlpA family COP00_10980 f743bdab703a9fee135616ec1c55c6f4 277 Gene3D G3DSA:3.40.190.10 117 225 5.2E-97 T 13-10-2018 COP00_10980 f743bdab703a9fee135616ec1c55c6f4 277 PIRSF PIRSF002854 1 277 1.6E-96 T 13-10-2018 IPR004872 Lipoprotein NlpA family COP00_10980 f743bdab703a9fee135616ec1c55c6f4 277 Gene3D G3DSA:3.40.190.10 37 273 5.2E-97 T 13-10-2018 COP00_10980 f743bdab703a9fee135616ec1c55c6f4 277 SUPERFAMILY SSF53850 35 274 2.03E-79 T 13-10-2018 COP00_13705 e3c2f8ea3f9851321fa063fef5f42849 335 Gene3D G3DSA:1.10.3470.10 1 335 1.2E-89 T 13-10-2018 IPR037294 ABC transporter, BtuC-like COP00_13705 e3c2f8ea3f9851321fa063fef5f42849 335 Pfam PF01032 FecCD transport family 11 329 1.2E-82 T 13-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 COP00_13705 e3c2f8ea3f9851321fa063fef5f42849 335 SUPERFAMILY SSF81345 4 329 2.75E-72 T 13-10-2018 IPR037294 ABC transporter, BtuC-like COP00_20265 2abb2d91cd91fdeca0f34c7e62e0430d 327 SUPERFAMILY SSF159774 32 321 1.31E-94 T 13-10-2018 IPR023158 YerB-like superfamily COP00_20265 2abb2d91cd91fdeca0f34c7e62e0430d 327 Pfam PF11258 Protein of unknown function (DUF3048) N-terminal domain 35 176 2.0E-50 T 13-10-2018 IPR021416 Protein of unknown function DUF3048, N-terminal COP00_20265 2abb2d91cd91fdeca0f34c7e62e0430d 327 Pfam PF17479 Protein of unknown function (DUF3048) C-terminal domain 209 310 3.7E-21 T 13-10-2018 IPR035328 Protein of unknown function DUF3048, C-terminal domain COP00_20265 2abb2d91cd91fdeca0f34c7e62e0430d 327 Gene3D G3DSA:3.50.90.10 23 327 3.5E-110 T 13-10-2018 IPR023158 YerB-like superfamily COP00_06460 a710d2171198059a6b03b1be9013ee40 319 Pfam PF06081 Aromatic acid exporter family member 1 2 142 4.6E-53 T 13-10-2018 IPR010343 Aromatic acid exporter family member 1 COP00_06460 a710d2171198059a6b03b1be9013ee40 319 Gene3D G3DSA:1.20.120.940 141 314 4.1E-55 T 13-10-2018 IPR038323 Putative aromatic acid exporter, C-terminal domain superfamily COP00_06460 a710d2171198059a6b03b1be9013ee40 319 Pfam PF11728 Putative aromatic acid exporter C-terminal domain 146 310 9.2E-59 T 13-10-2018 IPR021062 Putative aromatic acid exporter, C-terminal COP00_04065 dbc1dda6ee9d67369b39e8be97deaa84 235 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 9 217 6.2E-57 T 13-10-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 COP00_23810 4c1fffb29269372b04cbb7efa210f2ad 214 SUPERFAMILY SSF52266 3 211 7.33E-56 T 13-10-2018 COP00_23810 4c1fffb29269372b04cbb7efa210f2ad 214 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 8 192 1.2E-13 T 13-10-2018 IPR013830 SGNH hydrolase-type esterase domain COP00_23810 4c1fffb29269372b04cbb7efa210f2ad 214 Gene3D G3DSA:3.40.50.1110 3 214 1.8E-65 T 13-10-2018 IPR036514 SGNH hydrolase superfamily COP00_06175 baf7fec171607c6b992006f1ba8f4be9 306 Gene3D G3DSA:3.20.20.100 1 296 4.7E-108 T 13-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily COP00_06175 baf7fec171607c6b992006f1ba8f4be9 306 SUPERFAMILY SSF51430 1 297 8.12E-81 T 13-10-2018 IPR036812 NADP-dependent oxidoreductase domain superfamily COP00_06175 baf7fec171607c6b992006f1ba8f4be9 306 PRINTS PR00069 Aldo-keto reductase signature 134 151 5.3E-7 T 13-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 COP00_06175 baf7fec171607c6b992006f1ba8f4be9 306 PRINTS PR00069 Aldo-keto reductase signature 37 61 5.3E-7 T 13-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 COP00_06175 baf7fec171607c6b992006f1ba8f4be9 306 PRINTS PR00069 Aldo-keto reductase signature 103 121 5.3E-7 T 13-10-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 COP00_06175 baf7fec171607c6b992006f1ba8f4be9 306 Pfam PF00248 Aldo/keto reductase family 15 293 1.6E-64 T 13-10-2018 IPR023210 NADP-dependent oxidoreductase domain COP00_13385 05b88d1c8f847274821dbe8129d2fdec 149 Pfam PF14102 Capsule biosynthesis CapC 12 128 4.2E-39 T 13-10-2018 IPR008338 Capsule biosynthesis protein CapC GO:0016020|GO:0045227 COP00_13385 05b88d1c8f847274821dbe8129d2fdec 149 TIGRFAM TIGR04011 poly_gGlu_PgsC: poly-gamma-glutamate biosynthesis protein PgsC 10 139 5.4E-44 T 13-10-2018 IPR008338 Capsule biosynthesis protein CapC GO:0016020|GO:0045227 COP00_13385 05b88d1c8f847274821dbe8129d2fdec 149 PRINTS PR01759 Capsule biosynthesis protein CapC signature 88 101 7.2E-48 T 13-10-2018 IPR008338 Capsule biosynthesis protein CapC GO:0016020|GO:0045227 COP00_13385 05b88d1c8f847274821dbe8129d2fdec 149 PRINTS PR01759 Capsule biosynthesis protein CapC signature 20 37 7.2E-48 T 13-10-2018 IPR008338 Capsule biosynthesis protein CapC GO:0016020|GO:0045227 COP00_13385 05b88d1c8f847274821dbe8129d2fdec 149 PRINTS PR01759 Capsule biosynthesis protein CapC signature 66 80 7.2E-48 T 13-10-2018 IPR008338 Capsule biosynthesis protein CapC GO:0016020|GO:0045227 COP00_13385 05b88d1c8f847274821dbe8129d2fdec 149 PRINTS PR01759 Capsule biosynthesis protein CapC signature 2 17 7.2E-48 T 13-10-2018 IPR008338 Capsule biosynthesis protein CapC GO:0016020|GO:0045227 COP00_13385 05b88d1c8f847274821dbe8129d2fdec 149 PRINTS PR01759 Capsule biosynthesis protein CapC signature 118 132 7.2E-48 T 13-10-2018 IPR008338 Capsule biosynthesis protein CapC GO:0016020|GO:0045227 COP00_11300 18011861d8c2c29d981ecbf6e6a69f7e 354 Pfam PF01032 FecCD transport family 40 349 2.9E-93 T 13-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 COP00_11300 18011861d8c2c29d981ecbf6e6a69f7e 354 Gene3D G3DSA:1.10.3470.10 27 353 1.9E-96 T 13-10-2018 IPR037294 ABC transporter, BtuC-like COP00_11300 18011861d8c2c29d981ecbf6e6a69f7e 354 SUPERFAMILY SSF81345 23 349 5.75E-85 T 13-10-2018 IPR037294 ABC transporter, BtuC-like COP00_20745 cde2630743e0e0b8ce45db3ed51718b2 360 SMART SM00028 228 261 50.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 COP00_20745 cde2630743e0e0b8ce45db3ed51718b2 360 SMART SM00028 263 296 2.9 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 COP00_20745 cde2630743e0e0b8ce45db3ed51718b2 360 SMART SM00028 309 342 27.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 COP00_20745 cde2630743e0e0b8ce45db3ed51718b2 360 SMART SM00028 190 223 12.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 COP00_20745 cde2630743e0e0b8ce45db3ed51718b2 360 SUPERFAMILY SSF48452 189 357 8.25E-16 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 COP00_20745 cde2630743e0e0b8ce45db3ed51718b2 360 Gene3D G3DSA:1.25.40.10 264 360 4.8E-16 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 COP00_20745 cde2630743e0e0b8ce45db3ed51718b2 360 Gene3D G3DSA:1.25.40.10 176 263 8.1E-8 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 COP00_20745 cde2630743e0e0b8ce45db3ed51718b2 360 Pfam PF00535 Glycosyl transferase family 2 5 143 7.6E-21 T 13-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 COP00_20745 cde2630743e0e0b8ce45db3ed51718b2 360 Gene3D G3DSA:3.90.550.10 2 175 4.6E-26 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases COP00_20745 cde2630743e0e0b8ce45db3ed51718b2 360 SUPERFAMILY SSF53448 3 148 8.16E-25 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases COP00_01365 43108e155a7ffa371e4dbcce6bf6aae5 255 Pfam PF02108 Flagellar assembly protein FliH 120 240 6.4E-15 T 13-10-2018 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE COP00_01365 43108e155a7ffa371e4dbcce6bf6aae5 255 TIGRFAM TIGR03825 FliH_bacil: flagellar assembly protein FliH 4 254 1.1E-96 T 13-10-2018 IPR022524 Flagellar assembly FliH, Bacilli COP00_20040 c74fd6fe6edabd49460e21c4d23f12b0 417 Pfam PF13416 Bacterial extracellular solute-binding protein 55 353 2.2E-43 T 13-10-2018 IPR006059 Bacterial extracellular solute-binding protein COP00_20040 c74fd6fe6edabd49460e21c4d23f12b0 417 Gene3D G3DSA:3.40.190.10 143 403 5.9E-130 T 13-10-2018 COP00_20040 c74fd6fe6edabd49460e21c4d23f12b0 417 SUPERFAMILY SSF53850 43 405 3.21E-81 T 13-10-2018 COP00_20040 c74fd6fe6edabd49460e21c4d23f12b0 417 PRINTS PR00181 Maltose binding protein signature 155 174 2.7E-10 T 13-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 COP00_20040 c74fd6fe6edabd49460e21c4d23f12b0 417 PRINTS PR00181 Maltose binding protein signature 134 153 2.7E-10 T 13-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 COP00_20040 c74fd6fe6edabd49460e21c4d23f12b0 417 PRINTS PR00181 Maltose binding protein signature 76 94 2.7E-10 T 13-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 COP00_20040 c74fd6fe6edabd49460e21c4d23f12b0 417 PRINTS PR00181 Maltose binding protein signature 370 389 2.7E-10 T 13-10-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0008643|GO:0015144 COP00_20040 c74fd6fe6edabd49460e21c4d23f12b0 417 Gene3D G3DSA:3.40.190.10 53 370 5.9E-130 T 13-10-2018 COP00_00085 a1a670b4847bd37f83c5aa4df462e998 68 Pfam PF10960 BhlA holin family 5 59 2.3E-15 T 13-10-2018 IPR024405 Prophage protein BhlA/UviB COP00_00085 a1a670b4847bd37f83c5aa4df462e998 68 ProDom PD019268 UVIB BACTERIOCIN BHLA PLASMID ANTIBIOTIC HOLIN-LIKE PRECURSOR ANTIMICROBIAL SIGNAL PROPHAGE-DERIVED 4 58 9.0E-25 T 13-10-2018 IPR024405 Prophage protein BhlA/UviB COP00_05710 1d7526e47ff132364dd24f310960e629 492 Pfam PF09547 Stage IV sporulation protein A (spore_IV_A) 2 492 3.3E-227 T 13-10-2018 IPR014201 Sporulation stage IV, protein A GO:0005524|GO:0016887|GO:0043934 KEGG: 00230+3.6.1.3 COP00_05710 1d7526e47ff132364dd24f310960e629 492 TIGRFAM TIGR02836 spore_IV_A: stage IV sporulation protein A 1 492 6.1E-272 T 13-10-2018 IPR014201 Sporulation stage IV, protein A GO:0005524|GO:0016887|GO:0043934 KEGG: 00230+3.6.1.3 COP00_05710 1d7526e47ff132364dd24f310960e629 492 SUPERFAMILY SSF52540 19 225 2.72E-15 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_05710 1d7526e47ff132364dd24f310960e629 492 PIRSF PIRSF007466 1 492 2.9E-269 T 13-10-2018 IPR014201 Sporulation stage IV, protein A GO:0005524|GO:0016887|GO:0043934 KEGG: 00230+3.6.1.3 COP00_05710 1d7526e47ff132364dd24f310960e629 492 Gene3D G3DSA:3.40.50.300 12 236 2.4E-10 T 13-10-2018 COP00_08975 1038bddcd196305acc2296228354aa1c 227 Pfam PF04172 LrgB-like family 10 223 1.3E-68 T 13-10-2018 IPR007300 CidB/LrgB family COP00_08975 1038bddcd196305acc2296228354aa1c 227 Hamap MF_01142 Antiholin-like protein LrgB [lrgB]. 1 226 31.628 T 13-10-2018 IPR024891 Antiholin-like protein LrgB COP00_06690 5f78b85c1f018b2cab3576f29ad673fe 314 Pfam PF07136 Protein of unknown function (DUF1385) 56 298 1.8E-79 T 13-10-2018 IPR010787 Protein of unknown function DUF1385 COP00_06690 5f78b85c1f018b2cab3576f29ad673fe 314 ProDom PD131510 MEMBRANE METAL-DEPENDENT ENZYME YQHQ SPANNING SIMILAR LIPOPROTEIN LIPOPROTEIN PROTEIN HYP001 56 291 6.0E-126 T 13-10-2018 IPR010787 Protein of unknown function DUF1385 COP00_23790 d53d24fb08f8f3a5ae59b4339e462d57 214 Pfam PF04854 Protein of unknown function, DUF624 20 96 1.5E-28 T 13-10-2018 IPR006938 Protein of unknown function DUF624 COP00_12445 225a5421f88f53e982adddc2f72001c0 72 SMART SM00530 8 62 4.5E-7 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 COP00_12445 225a5421f88f53e982adddc2f72001c0 72 Gene3D G3DSA:1.10.260.40 1 68 4.7E-12 T 13-10-2018 COP00_12445 225a5421f88f53e982adddc2f72001c0 72 SUPERFAMILY SSF47413 7 65 4.02E-11 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 COP00_12445 225a5421f88f53e982adddc2f72001c0 72 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 8 65 1.3E-7 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 COP00_19920 7e0d570bcf1bf17d0bb8bb21e5a644be 461 Pfam PF13520 Amino acid permease 26 446 3.9E-60 T 13-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 COP00_19920 7e0d570bcf1bf17d0bb8bb21e5a644be 461 Gene3D G3DSA:1.20.1740.10 21 461 2.7E-131 T 13-10-2018 COP00_19920 7e0d570bcf1bf17d0bb8bb21e5a644be 461 PIRSF PIRSF006060 10 460 4.1E-90 T 13-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 COP00_00055 3ae2798d2116e98b594876d5be33273d 273 Gene3D G3DSA:2.40.30.200 4 135 2.6E-5 T 13-10-2018 IPR038675 Streptococcus phage 7201 Orf34, N-terminal domain superfamily COP00_00055 3ae2798d2116e98b594876d5be33273d 273 Pfam PF05709 Phage tail protein 24 273 4.4E-48 T 13-10-2018 IPR008841 Siphovirus-type tail component COP00_14535 5e47be04f4be55b3e809a96dc9b356c3 49 Pfam PF12459 D-Ala-teichoic acid biosynthesis protein 8 49 2.4E-16 T 13-10-2018 IPR021008 Protein of unknown function DUF3687 COP00_18230 07f05bfb77223db4391369be4281f5be 500 SUPERFAMILY SSF51905 3 369 7.02E-63 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily COP00_18230 07f05bfb77223db4391369be4281f5be 500 Pfam PF01494 FAD binding domain 4 339 1.2E-76 T 13-10-2018 IPR002938 FAD-binding domain GO:0071949 COP00_18230 07f05bfb77223db4391369be4281f5be 500 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 152 167 1.6E-41 T 13-10-2018 COP00_18230 07f05bfb77223db4391369be4281f5be 500 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 308 326 1.6E-41 T 13-10-2018 COP00_18230 07f05bfb77223db4391369be4281f5be 500 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 3 25 1.6E-41 T 13-10-2018 COP00_18230 07f05bfb77223db4391369be4281f5be 500 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 290 306 1.6E-41 T 13-10-2018 COP00_18230 07f05bfb77223db4391369be4281f5be 500 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 326 342 1.6E-41 T 13-10-2018 COP00_18230 07f05bfb77223db4391369be4281f5be 500 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 275 290 1.6E-41 T 13-10-2018 COP00_18230 07f05bfb77223db4391369be4281f5be 500 Gene3D G3DSA:3.30.70.2450 181 264 7.5E-102 T 13-10-2018 COP00_18230 07f05bfb77223db4391369be4281f5be 500 Gene3D G3DSA:3.50.50.60 4 340 7.5E-102 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily COP00_13965 82d142d7e7fc8288ba846110b8db3ab1 429 Gene3D G3DSA:3.65.10.10 6 413 2.3E-158 T 13-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 COP00_13965 82d142d7e7fc8288ba846110b8db3ab1 429 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 415 9.7E-173 T 13-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 COP00_13965 82d142d7e7fc8288ba846110b8db3ab1 429 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 416 42.387 T 13-10-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387|MetaCyc: PWY-7953 COP00_13965 82d142d7e7fc8288ba846110b8db3ab1 429 SUPERFAMILY SSF55205 1 416 3.27E-134 T 13-10-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 COP00_13965 82d142d7e7fc8288ba846110b8db3ab1 429 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 8 406 1.0E-95 T 13-10-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 COP00_13965 82d142d7e7fc8288ba846110b8db3ab1 429 Gene3D G3DSA:3.65.10.10 21 228 2.3E-158 T 13-10-2018 IPR036968 Enolpyruvate transferase domain superfamily GO:0016765 COP00_22375 842838b54fab15fd81cfc1ce74606cc0 353 SMART SM00028 119 152 18.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 COP00_22375 842838b54fab15fd81cfc1ce74606cc0 353 SMART SM00028 160 193 40.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 COP00_22375 842838b54fab15fd81cfc1ce74606cc0 353 SMART SM00028 313 346 170.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 COP00_22375 842838b54fab15fd81cfc1ce74606cc0 353 SMART SM00028 200 233 220.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 COP00_22375 842838b54fab15fd81cfc1ce74606cc0 353 SMART SM00028 239 272 260.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 COP00_22375 842838b54fab15fd81cfc1ce74606cc0 353 Pfam PF13424 Tetratricopeptide repeat 162 228 4.9E-12 T 13-10-2018 COP00_22375 842838b54fab15fd81cfc1ce74606cc0 353 SUPERFAMILY SSF48452 113 259 4.88E-17 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 COP00_22375 842838b54fab15fd81cfc1ce74606cc0 353 Gene3D G3DSA:1.25.40.10 1 352 9.8E-76 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 COP00_24075 6ec80f72f39a795082da836c9396e694 239 Pfam PF08876 Domain of unknown function (DUF1836) 50 158 4.7E-18 T 13-10-2018 IPR014975 Protein of unknown function DUF1836 COP00_10225 c9d0646ee257a54e155c45d8241e7ec3 276 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 9 268 8.7E-100 T 13-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 COP00_10225 c9d0646ee257a54e155c45d8241e7ec3 276 Pfam PF02673 Bacitracin resistance protein BacA 9 270 4.4E-84 T 13-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 COP00_10225 c9d0646ee257a54e155c45d8241e7ec3 276 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 4 275 17.968 T 13-10-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 COP00_21230 f0b95729e763591799cba995199f1f31 432 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 6 427 1.3E-171 T 13-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 COP00_21230 f0b95729e763591799cba995199f1f31 432 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 237 273 - T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 COP00_21230 f0b95729e763591799cba995199f1f31 432 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 5 428 94.577 T 13-10-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 COP00_21230 f0b95729e763591799cba995199f1f31 432 Gene3D G3DSA:3.90.1150.10 9 423 1.3E-170 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 COP00_21230 f0b95729e763591799cba995199f1f31 432 Gene3D G3DSA:3.40.640.10 72 320 1.3E-170 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 COP00_21230 f0b95729e763591799cba995199f1f31 432 SUPERFAMILY SSF53383 2 428 2.24E-124 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase COP00_21230 f0b95729e763591799cba995199f1f31 432 Pfam PF00202 Aminotransferase class-III 36 399 3.7E-70 T 13-10-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 COP00_17635 e611ee0ee6159e8e94ee372c6fea5f2e 459 Pfam PF13520 Amino acid permease 28 429 2.6E-59 T 13-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 COP00_17635 e611ee0ee6159e8e94ee372c6fea5f2e 459 PIRSF PIRSF006060 7 458 8.2E-83 T 13-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 COP00_17635 e611ee0ee6159e8e94ee372c6fea5f2e 459 Gene3D G3DSA:1.20.1740.10 20 459 6.4E-124 T 13-10-2018 COP00_02925 dac0c5198eb87061e196ededfe4f23d6 194 Gene3D G3DSA:3.40.50.300 1 193 2.8E-25 T 13-10-2018 COP00_02925 dac0c5198eb87061e196ededfe4f23d6 194 SUPERFAMILY SSF52540 1 192 1.21E-14 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_13315 480d02491e636efbd071b3e2e2e16a44 622 SUPERFAMILY SSF51998 32 600 2.75E-157 T 13-10-2018 COP00_13315 480d02491e636efbd071b3e2e2e16a44 622 Gene3D G3DSA:3.20.70.20 40 603 1.2E-203 T 13-10-2018 COP00_13315 480d02491e636efbd071b3e2e2e16a44 622 TIGRFAM TIGR02487 NrdD: anaerobic ribonucleoside-triphosphate reductase 30 621 2.9E-205 T 13-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 COP00_13315 480d02491e636efbd071b3e2e2e16a44 622 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 31 621 7.4E-208 T 13-10-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.1.98.6|KEGG: 00240+1.1.98.6|MetaCyc: PWY-7187|MetaCyc: PWY-7220|MetaCyc: PWY-7222 COP00_17790 990d4ecefa1111f544a086894a58f8d7 53 Pfam PF15777 Tryptophan RNA-binding attenuator protein inhibitory protein 2 51 5.9E-23 T 13-10-2018 IPR031538 Tryptophan RNA-binding attenuator protein inhibitory protein COP00_17790 990d4ecefa1111f544a086894a58f8d7 53 Gene3D G3DSA:2.10.230.20 1 53 6.1E-26 T 13-10-2018 COP00_17790 990d4ecefa1111f544a086894a58f8d7 53 SUPERFAMILY SSF57938 9 41 2.22E-7 T 13-10-2018 IPR036410 Heat shock protein DnaJ, cysteine-rich domain superfamily COP00_12230 301fe6b72f1e5ecf5b90f3d70b2db498 107 SUPERFAMILY SSF46785 14 106 1.18E-29 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_12230 301fe6b72f1e5ecf5b90f3d70b2db498 107 Gene3D G3DSA:1.10.10.10 2 107 1.7E-36 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_12230 301fe6b72f1e5ecf5b90f3d70b2db498 107 Pfam PF01638 HxlR-like helix-turn-helix 21 106 2.4E-30 T 13-10-2018 IPR002577 Helix-turn-helix, HxlR type COP00_23750 d8174c8b59c9f563a0f8c4af01a73a5e 384 Gene3D G3DSA:1.10.10.60 275 327 5.4E-12 T 13-10-2018 COP00_23750 d8174c8b59c9f563a0f8c4af01a73a5e 384 Pfam PF12833 Helix-turn-helix domain 305 381 1.1E-15 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 COP00_23750 d8174c8b59c9f563a0f8c4af01a73a5e 384 Gene3D G3DSA:3.40.50.12740 4 177 1.5E-31 T 13-10-2018 COP00_23750 d8174c8b59c9f563a0f8c4af01a73a5e 384 SMART SM00448 3 117 3.5E-25 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 COP00_23750 d8174c8b59c9f563a0f8c4af01a73a5e 384 Gene3D G3DSA:1.10.10.60 328 383 1.4E-17 T 13-10-2018 COP00_23750 d8174c8b59c9f563a0f8c4af01a73a5e 384 Pfam PF00072 Response regulator receiver domain 5 117 4.1E-23 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 COP00_23750 d8174c8b59c9f563a0f8c4af01a73a5e 384 SUPERFAMILY SSF52172 2 138 1.02E-31 T 13-10-2018 IPR011006 CheY-like superfamily COP00_23750 d8174c8b59c9f563a0f8c4af01a73a5e 384 SUPERFAMILY SSF46689 331 382 5.38E-8 T 13-10-2018 IPR009057 Homeobox-like domain superfamily GO:0003677 COP00_23750 d8174c8b59c9f563a0f8c4af01a73a5e 384 SMART SM00342 298 380 4.0E-20 T 13-10-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 COP00_18065 25009256a37eb45752e03add1347d260 477 Pfam PF03606 C4-dicarboxylate anaerobic carrier 21 470 1.3E-75 T 13-10-2018 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 COP00_08685 da9cefc4010b20668e2eea27b5de2008 194 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 3 193 2.3E-67 T 13-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 COP00_08685 da9cefc4010b20668e2eea27b5de2008 194 Pfam PF01725 Ham1 family 4 190 1.3E-60 T 13-10-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 KEGG: 00230+3.6.1.66|Reactome: R-HSA-74259 COP00_08685 da9cefc4010b20668e2eea27b5de2008 194 Hamap MF_01405 dITP/XTP pyrophosphatase. 2 194 47.839 T 13-10-2018 IPR020922 dITP/XTP pyrophosphatase GO:0009143|GO:0017111 KEGG: 00230+3.6.1.66 COP00_08685 da9cefc4010b20668e2eea27b5de2008 194 SUPERFAMILY SSF52972 1 193 7.06E-71 T 13-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like COP00_08685 da9cefc4010b20668e2eea27b5de2008 194 Gene3D G3DSA:3.90.950.10 1 194 1.3E-77 T 13-10-2018 IPR029001 Inosine triphosphate pyrophosphatase-like COP00_05025 935af637fe68189b485a11e19f3e9966 273 Pfam PF02557 D-alanyl-D-alanine carboxypeptidase 121 250 4.5E-46 T 13-10-2018 IPR003709 Peptidase M15B GO:0006508|GO:0008233 COP00_05025 935af637fe68189b485a11e19f3e9966 273 SUPERFAMILY SSF55166 105 258 1.05E-41 T 13-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 COP00_05025 935af637fe68189b485a11e19f3e9966 273 Gene3D G3DSA:3.30.1380.10 57 273 9.7E-91 T 13-10-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain superfamily Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 COP00_09100 f58669b519624cbb3c0f5c16baa743e0 154 Hamap MF_01874 UPF0756 membrane protein YeaL [yeaL]. 3 149 19.294 T 13-10-2018 IPR007382 Uncharacterised protein family UPF0756, transmembrame COP00_09100 f58669b519624cbb3c0f5c16baa743e0 154 ProDom PD021096 MEMBRANE YEAL PRECURSOR SIGNAL PROTEIN TRANSMEMBRANE YTWI HI1074 INTEGRAL SPANNING 21 131 3.0E-44 T 13-10-2018 IPR007382 Uncharacterised protein family UPF0756, transmembrame COP00_09100 f58669b519624cbb3c0f5c16baa743e0 154 Pfam PF04284 Protein of unknown function (DUF441) 7 146 2.6E-49 T 13-10-2018 IPR007382 Uncharacterised protein family UPF0756, transmembrame COP00_07230 63cbbb639efdabd551f7d366b60f6054 126 ProSitePatterns PS01069 Prokaryotic diacylglycerol kinase signature. 74 85 - T 13-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 COP00_07230 63cbbb639efdabd551f7d366b60f6054 126 Gene3D G3DSA:1.10.3830.10 8 125 4.0E-37 T 13-10-2018 IPR036945 Diacylglycerol kinase (DAGK) superfamily GO:0008610|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 COP00_07230 63cbbb639efdabd551f7d366b60f6054 126 Pfam PF01219 Prokaryotic diacylglycerol kinase 21 121 6.0E-34 T 13-10-2018 IPR000829 DAGK family GO:0008654|GO:0016020|GO:0016301 KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 COP00_00210 8065ebc29e1c6ca6a61d9402e3d888ef 342 TIGRFAM TIGR04070 photo_TT_lyase: spore photoproduct lyase 5 342 2.6E-152 T 13-10-2018 IPR023897 Spore photoproduct lyase GO:0003913 COP00_00210 8065ebc29e1c6ca6a61d9402e3d888ef 342 Gene3D G3DSA:3.40.50.12110 3 115 3.3E-45 T 13-10-2018 COP00_00210 8065ebc29e1c6ca6a61d9402e3d888ef 342 SUPERFAMILY SSF102114 85 233 6.8E-6 T 13-10-2018 COP00_00210 8065ebc29e1c6ca6a61d9402e3d888ef 342 Gene3D G3DSA:3.80.30.30 116 342 1.3E-88 T 13-10-2018 COP00_20100 9628d47880c329e85368888bbbca1f08 340 SUPERFAMILY SSF69322 74 338 7.98E-17 T 13-10-2018 COP00_20100 9628d47880c329e85368888bbbca1f08 340 Gene3D G3DSA:2.120.10.30 202 330 1.1E-11 T 13-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like COP00_20100 9628d47880c329e85368888bbbca1f08 340 Gene3D G3DSA:2.120.10.30 58 201 3.3E-5 T 13-10-2018 IPR011042 Six-bladed beta-propeller, TolB-like COP00_20100 9628d47880c329e85368888bbbca1f08 340 Pfam PF07676 WD40-like Beta Propeller Repeat 275 293 0.022 T 13-10-2018 IPR011659 WD40-like Beta Propeller COP00_20100 9628d47880c329e85368888bbbca1f08 340 Pfam PF07676 WD40-like Beta Propeller Repeat 226 245 1.6E-4 T 13-10-2018 IPR011659 WD40-like Beta Propeller COP00_19610 055b3ef205c512fc5e0f7d7fd5ad5b03 56 Pfam PF13076 Fur-regulated basic protein A 13 48 8.1E-12 T 13-10-2018 IPR025072 Fur-regulated basic protein A COP00_14965 d62b284f87743d7851d3637c77d888c8 478 SUPERFAMILY SSF51445 5 466 3.75E-136 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily COP00_14965 d62b284f87743d7851d3637c77d888c8 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 297 311 5.7E-12 T 13-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 COP00_14965 d62b284f87743d7851d3637c77d888c8 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 414 431 5.7E-12 T 13-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 COP00_14965 d62b284f87743d7851d3637c77d888c8 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 438 450 5.7E-12 T 13-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 COP00_14965 d62b284f87743d7851d3637c77d888c8 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 369 377 5.7E-12 T 13-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 COP00_14965 d62b284f87743d7851d3637c77d888c8 478 PRINTS PR00131 Glycosyl hydrolase family 1 signature 393 404 5.7E-12 T 13-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 COP00_14965 d62b284f87743d7851d3637c77d888c8 478 Pfam PF00232 Glycosyl hydrolase family 1 7 469 7.8E-102 T 13-10-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 COP00_14965 d62b284f87743d7851d3637c77d888c8 478 Gene3D G3DSA:3.20.20.80 6 470 6.0E-122 T 13-10-2018 COP00_21015 995c36d9de53614890ba9428cc10d970 158 Gene3D G3DSA:1.20.5.170 25 74 2.4E-8 T 13-10-2018 COP00_17875 1bcbff4bef734c09b617b08335553d75 150 Pfam PF00583 Acetyltransferase (GNAT) family 27 115 7.1E-16 T 13-10-2018 IPR000182 GNAT domain COP00_17875 1bcbff4bef734c09b617b08335553d75 150 SUPERFAMILY SSF55729 7 148 2.23E-32 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase COP00_17875 1bcbff4bef734c09b617b08335553d75 150 Gene3D G3DSA:3.40.630.30 1 150 1.2E-49 T 13-10-2018 COP00_01280 d29f88bca82883d4e6f00eb4780404cc 255 SUPERFAMILY SSF53098 63 254 2.12E-67 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily COP00_01280 d29f88bca82883d4e6f00eb4780404cc 255 Pfam PF01351 Ribonuclease HII 75 250 6.8E-35 T 13-10-2018 IPR024567 Ribonuclease HII/HIII domain COP00_01280 d29f88bca82883d4e6f00eb4780404cc 255 Hamap MF_00052_B Ribonuclease HII [rnhB]. 73 251 37.808 T 13-10-2018 IPR022898 Ribonuclease HII GO:0004523 COP00_01280 d29f88bca82883d4e6f00eb4780404cc 255 Gene3D G3DSA:3.30.420.10 50 255 7.7E-78 T 13-10-2018 IPR036397 Ribonuclease H superfamily GO:0003676 COP00_03805 c6475bccfdedb5c5c4c40bd6ef1b7424 395 Pfam PF07690 Major Facilitator Superfamily 14 341 1.2E-41 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 COP00_03805 c6475bccfdedb5c5c4c40bd6ef1b7424 395 Gene3D G3DSA:1.20.1250.20 3 180 8.0E-37 T 13-10-2018 COP00_03805 c6475bccfdedb5c5c4c40bd6ef1b7424 395 Gene3D G3DSA:1.20.1250.20 186 392 1.6E-50 T 13-10-2018 COP00_03805 c6475bccfdedb5c5c4c40bd6ef1b7424 395 SUPERFAMILY SSF103473 5 384 1.12E-60 T 13-10-2018 IPR036259 MFS transporter superfamily COP00_17920 88bcc2425ee056031847845d1482e572 336 Pfam PF08874 Domain of unknown function (DUF1835) 68 190 2.6E-33 T 13-10-2018 IPR014973 Protein of unknown function DUF1835 COP00_17920 88bcc2425ee056031847845d1482e572 336 Pfam PF12395 Protein of unknown function 221 329 1.6E-31 T 13-10-2018 IPR022123 Protein of unknown function DUF3658 COP00_10945 245b8738ef2ce16859efdf407f791406 465 TIGRFAM TIGR01980 sufB: FeS assembly protein SufB 10 456 5.4E-232 T 13-10-2018 IPR010231 SUF system FeS cluster assembly, SufB GO:0016226 COP00_10945 245b8738ef2ce16859efdf407f791406 465 Pfam PF01458 Uncharacterized protein family (UPF0051) 211 436 6.4E-75 T 13-10-2018 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 COP00_10945 245b8738ef2ce16859efdf407f791406 465 SUPERFAMILY SSF101960 32 462 9.94E-141 T 13-10-2018 IPR037284 SUF system FeS cluster assembly, SufBD superfamily COP00_07480 f4e10004f54113a83b184752149e6e8f 299 Gene3D G3DSA:1.10.10.10 1 89 5.8E-24 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_07480 f4e10004f54113a83b184752149e6e8f 299 Pfam PF03466 LysR substrate binding domain 86 288 1.9E-47 T 13-10-2018 IPR005119 LysR, substrate-binding COP00_07480 f4e10004f54113a83b184752149e6e8f 299 Gene3D G3DSA:3.40.190.290 90 293 2.6E-41 T 13-10-2018 COP00_07480 f4e10004f54113a83b184752149e6e8f 299 SUPERFAMILY SSF53850 88 290 8.81E-41 T 13-10-2018 COP00_07480 f4e10004f54113a83b184752149e6e8f 299 SUPERFAMILY SSF46785 1 110 7.0E-25 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_07480 f4e10004f54113a83b184752149e6e8f 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 9.5E-19 T 13-10-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 COP00_12715 dbc50bc618f807aca9539c1e6797b53f 149 Pfam PF11645 PD-(D/E)XK endonuclease 17 105 3.6E-5 T 13-10-2018 IPR021671 PD(D/E)XK endonuclease COP00_12715 dbc50bc618f807aca9539c1e6797b53f 149 Gene3D G3DSA:3.40.1350.10 5 120 9.5E-13 T 13-10-2018 IPR011856 tRNA endonuclease-like domain superfamily GO:0003676|GO:0004518 COP00_11150 338d97fbd32b2a3e5125564eae31648a 366 Pfam PF03845 Spore germination protein 10 330 4.3E-87 T 13-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 COP00_11150 338d97fbd32b2a3e5125564eae31648a 366 TIGRFAM TIGR00912 2A0309: spore germination protein (amino acid permease) 9 364 1.3E-86 T 13-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 COP00_00205 efb410c992fe056671601dcddaed1b57 75 ProDom PD028055 SPLA TRANSCRIPTIONAL TRANSCRIPTION REGULATOR REGULATION 1 75 2.0E-31 T 13-10-2018 COP00_00205 efb410c992fe056671601dcddaed1b57 75 Pfam PF11132 Transcriptional regulator protein (SplA) 3 75 6.5E-38 T 13-10-2018 IPR022608 Transcription regulator SplA COP00_00345 dd34afe4207af2a97c14fb5fbfd2357c 236 Gene3D G3DSA:3.30.70.250 1 84 7.3E-35 T 13-10-2018 COP00_00345 dd34afe4207af2a97c14fb5fbfd2357c 236 Gene3D G3DSA:2.160.10.10 85 236 1.4E-49 T 13-10-2018 COP00_00345 dd34afe4207af2a97c14fb5fbfd2357c 236 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 174 202 - T 13-10-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 COP00_00345 dd34afe4207af2a97c14fb5fbfd2357c 236 SUPERFAMILY SSF51161 40 223 7.9E-50 T 13-10-2018 IPR011004 Trimeric LpxA-like superfamily COP00_00345 dd34afe4207af2a97c14fb5fbfd2357c 236 Pfam PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal 4 87 3.6E-35 T 13-10-2018 IPR013710 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase, N-terminal GO:0047200 KEGG: 00300+2.3.1.89|MetaCyc: PWY-2941 COP00_00345 dd34afe4207af2a97c14fb5fbfd2357c 236 TIGRFAM TIGR03532 DapD_Ac: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase 6 236 6.7E-118 T 13-10-2018 IPR019873 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase, DapH GO:0009089|GO:0047200 KEGG: 00300+2.3.1.89|MetaCyc: PWY-2941 COP00_00345 dd34afe4207af2a97c14fb5fbfd2357c 236 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 165 198 1.7E-8 T 13-10-2018 IPR001451 Hexapeptide repeat COP00_00345 dd34afe4207af2a97c14fb5fbfd2357c 236 Hamap MF_01691 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase [dapH]. 1 235 45.547 T 13-10-2018 IPR019873 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase, DapH GO:0009089|GO:0047200 KEGG: 00300+2.3.1.89|MetaCyc: PWY-2941 COP00_00345 dd34afe4207af2a97c14fb5fbfd2357c 236 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 91 118 3.5E-4 T 13-10-2018 IPR001451 Hexapeptide repeat COP00_00345 dd34afe4207af2a97c14fb5fbfd2357c 236 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 121 156 4.1E-11 T 13-10-2018 IPR001451 Hexapeptide repeat COP00_23530 f1901a3f78c721a03da3b38c98e25255 549 Pfam PF14449 Pre-toxin TG 262 328 1.4E-15 T 13-10-2018 IPR027797 Pre-toxin TG domain COP00_23530 f1901a3f78c721a03da3b38c98e25255 549 Pfam PF04740 LXG domain of WXG superfamily 2 201 3.2E-46 T 13-10-2018 IPR006829 LXG domain COP00_12135 edfe29ebb28e5b390c200cd11e7daac3 339 Pfam PF00535 Glycosyl transferase family 2 6 160 3.7E-41 T 13-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 COP00_12135 edfe29ebb28e5b390c200cd11e7daac3 339 Gene3D G3DSA:3.90.550.10 2 204 1.2E-59 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases COP00_12135 edfe29ebb28e5b390c200cd11e7daac3 339 SUPERFAMILY SSF53448 3 226 2.14E-60 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases COP00_02030 62f6f4e5e981e537b370e2a591d5d969 526 Pfam PF13520 Amino acid permease 13 422 4.7E-47 T 13-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 COP00_02030 62f6f4e5e981e537b370e2a591d5d969 526 PIRSF PIRSF006060 1 480 4.8E-80 T 13-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 COP00_02030 62f6f4e5e981e537b370e2a591d5d969 526 Gene3D G3DSA:1.20.1740.10 6 452 6.1E-75 T 13-10-2018 COP00_22675 5fc35609dd09b06de2f7a220442b43e9 286 Gene3D G3DSA:3.40.50.10440 5 138 1.7E-45 T 13-10-2018 COP00_22675 5fc35609dd09b06de2f7a220442b43e9 286 SUPERFAMILY SSF82549 1 283 8.11E-91 T 13-10-2018 COP00_22675 5fc35609dd09b06de2f7a220442b43e9 286 TIGRFAM TIGR00762 DegV: EDD domain protein, DegV family 4 280 1.1E-94 T 13-10-2018 IPR003797 DegV COP00_22675 5fc35609dd09b06de2f7a220442b43e9 286 Gene3D G3DSA:3.30.1180.10 156 285 1.2E-49 T 13-10-2018 COP00_22675 5fc35609dd09b06de2f7a220442b43e9 286 Pfam PF02645 Uncharacterised protein, DegV family COG1307 3 281 3.8E-88 T 13-10-2018 IPR003797 DegV COP00_22675 5fc35609dd09b06de2f7a220442b43e9 286 Gene3D G3DSA:2.20.28.50 28 62 1.7E-45 T 13-10-2018 COP00_20530 89f5bb6fc520abcd076adfd323a6a510 371 Gene3D G3DSA:3.50.50.60 144 270 1.3E-131 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily COP00_20530 89f5bb6fc520abcd076adfd323a6a510 371 Pfam PF13738 Pyridine nucleotide-disulphide oxidoreductase 7 309 6.8E-99 T 13-10-2018 COP00_20530 89f5bb6fc520abcd076adfd323a6a510 371 SUPERFAMILY SSF51905 5 281 4.24E-26 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily COP00_20530 89f5bb6fc520abcd076adfd323a6a510 371 Gene3D G3DSA:3.50.50.60 6 371 1.3E-131 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily COP00_20530 89f5bb6fc520abcd076adfd323a6a510 371 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 166 190 1.9E-6 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 COP00_20530 89f5bb6fc520abcd076adfd323a6a510 371 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 5 27 1.9E-6 T 13-10-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 COP00_02705 3b1828d2ce3f7123e2e2f0955bd75ad1 458 Pfam PF14072 DNA-sulfur modification-associated 128 440 4.5E-16 T 13-10-2018 IPR017642 DNA sulphur modification protein DndB COP00_21575 3271b7b1e138828b95588be9952a82dc 193 Pfam PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) 16 189 4.5E-32 T 13-10-2018 IPR019076 Sporulation lipoprotein YhcN/YlaJ-like COP00_21575 3271b7b1e138828b95588be9952a82dc 193 TIGRFAM TIGR02898 spore_YhcN_YlaJ: sporulation lipoprotein, YhcN/YlaJ family 10 190 7.2E-47 T 13-10-2018 IPR014247 Sporulation lipoprotein YhcN/YlaJ GO:0030435 COP00_14710 a5b5bb15bdbccb544e7ec2dadbd56d88 310 ProSitePatterns PS00534 Ferrochelatase signature. 178 196 - T 13-10-2018 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 COP00_14710 a5b5bb15bdbccb544e7ec2dadbd56d88 310 Gene3D G3DSA:3.40.50.1400 8 303 1.9E-103 T 13-10-2018 COP00_14710 a5b5bb15bdbccb544e7ec2dadbd56d88 310 SUPERFAMILY SSF53800 3 307 1.64E-91 T 13-10-2018 COP00_14710 a5b5bb15bdbccb544e7ec2dadbd56d88 310 TIGRFAM TIGR00109 hemH: ferrochelatase 2 308 7.8E-94 T 13-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 COP00_14710 a5b5bb15bdbccb544e7ec2dadbd56d88 310 Hamap MF_00323 Ferrochelatase [hemH]. 4 307 32.722 T 13-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 COP00_14710 a5b5bb15bdbccb544e7ec2dadbd56d88 310 Pfam PF00762 Ferrochelatase 5 306 3.2E-86 T 13-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 COP00_14710 a5b5bb15bdbccb544e7ec2dadbd56d88 310 Gene3D G3DSA:3.40.50.1400 148 288 1.9E-103 T 13-10-2018 COP00_11870 c69cd3bf7bc9ddf1ea7e5dd8a6d3564b 147 Pfam PF06114 IrrE N-terminal-like domain 25 136 3.6E-17 T 13-10-2018 IPR010359 IrrE N-terminal-like domain COP00_09580 bf7fb710e94471cbf79e360095a68ef1 321 SUPERFAMILY SSF161098 77 307 7.33E-48 T 13-10-2018 IPR035906 MetI-like superfamily COP00_09580 bf7fb710e94471cbf79e360095a68ef1 321 Gene3D G3DSA:1.10.3720.10 73 321 6.2E-60 T 13-10-2018 IPR035906 MetI-like superfamily COP00_09580 bf7fb710e94471cbf79e360095a68ef1 321 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 110 314 8.6E-15 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 COP00_09405 e231496b89fcbb37fce3f455755e99f3 269 PIRSF PIRSF012562 1 268 2.4E-137 T 13-10-2018 IPR010838 Protein of unknown unction DUF1444 COP00_09405 e231496b89fcbb37fce3f455755e99f3 269 Hamap MF_01548 UPF0354 protein . 3 268 48.402 T 13-10-2018 IPR010838 Protein of unknown unction DUF1444 COP00_09405 e231496b89fcbb37fce3f455755e99f3 269 Pfam PF07285 Protein of unknown function (DUF1444) 3 267 7.2E-129 T 13-10-2018 IPR010838 Protein of unknown unction DUF1444 COP00_12305 24a602ab0e24610145a68c9405f64945 76 Pfam PF04688 SPP1 phage holin 8 74 1.9E-28 T 13-10-2018 IPR006479 Holin COP00_12305 24a602ab0e24610145a68c9405f64945 76 ProDom PD008023 HOLIN TRANSMEMBRANE MEMBRANE PROPHAGE FAMILY BHLB SPP1 5'REGION HOLIN ORF050 9 72 6.0E-20 T 13-10-2018 IPR006479 Holin COP00_12305 24a602ab0e24610145a68c9405f64945 76 TIGRFAM TIGR01592 holin_SPP1: holin, SPP1 family 9 74 3.9E-29 T 13-10-2018 IPR006479 Holin COP00_04075 8f22503a22dc2d9141be1ac882ee6414 208 Gene3D G3DSA:3.40.50.360 1 208 8.1E-61 T 13-10-2018 IPR029039 Flavoprotein-like superfamily COP00_04075 8f22503a22dc2d9141be1ac882ee6414 208 SUPERFAMILY SSF52218 1 205 1.52E-50 T 13-10-2018 IPR029039 Flavoprotein-like superfamily COP00_04075 8f22503a22dc2d9141be1ac882ee6414 208 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 2 205 29.061 T 13-10-2018 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 COP00_04075 8f22503a22dc2d9141be1ac882ee6414 208 Pfam PF02525 Flavodoxin-like fold 3 203 3.4E-44 T 13-10-2018 IPR003680 Flavodoxin-like fold COP00_05220 fb786cbd7a2dee565927f2838ef48d89 201 Pfam PF14005 YpjP-like protein 67 198 9.5E-60 T 13-10-2018 IPR025616 YpjP-like protein COP00_09210 d99010c0ccfa273beefd59e915ffde30 328 PIRSF PIRSF026567 1 328 9.9E-139 T 13-10-2018 IPR016843 S-adenosyl-L-methionine dependent adenine methyltransferase, bacteria, predicted COP00_09210 d99010c0ccfa273beefd59e915ffde30 328 Pfam PF02384 N-6 DNA Methylase 96 310 2.7E-14 T 13-10-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 COP00_09210 d99010c0ccfa273beefd59e915ffde30 328 Gene3D G3DSA:1.10.150.470 1 84 2.7E-19 T 13-10-2018 COP00_09210 d99010c0ccfa273beefd59e915ffde30 328 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 216 240 7.9E-6 T 13-10-2018 COP00_09210 d99010c0ccfa273beefd59e915ffde30 328 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 120 134 7.9E-6 T 13-10-2018 COP00_09210 d99010c0ccfa273beefd59e915ffde30 328 Gene3D G3DSA:3.40.50.150 89 327 3.8E-55 T 13-10-2018 COP00_09210 d99010c0ccfa273beefd59e915ffde30 328 SUPERFAMILY SSF53335 24 311 2.81E-45 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase COP00_16290 920fd13851581524d8df5109949d5eae 76 Pfam PF10955 Protein of unknown function (DUF2757) 1 76 4.3E-38 T 13-10-2018 IPR020115 Anti-sigma-F factor Fin GO:0010468 COP00_16290 920fd13851581524d8df5109949d5eae 76 ProDom PD057826 YABK 4 76 4.0E-36 T 13-10-2018 IPR020115 Anti-sigma-F factor Fin GO:0010468 COP00_17450 a7c9eee3546e623ab2ace00fb39c2401 85 SUPERFAMILY SSF89447 1 41 8.63E-12 T 13-10-2018 IPR037914 SpoVT-AbrB domain superfamily COP00_17450 a7c9eee3546e623ab2ace00fb39c2401 85 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 5 43 9.5E-8 T 13-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 COP00_17450 a7c9eee3546e623ab2ace00fb39c2401 85 TIGRFAM TIGR01439 lp_hng_hel_AbrB: transcriptional regulator, AbrB family 2 39 5.2E-10 T 13-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 COP00_17450 a7c9eee3546e623ab2ace00fb39c2401 85 SMART SM00966 1 42 0.0024 T 13-10-2018 IPR007159 SpoVT-AbrB domain GO:0003677 COP00_17450 a7c9eee3546e623ab2ace00fb39c2401 85 Gene3D G3DSA:2.10.260.10 1 45 2.6E-18 T 13-10-2018 COP00_09475 7c3d811037b22703630554a2df13ef51 151 ProDom PD091678 YNCE 3 151 5.0E-41 T 13-10-2018 IPR020216 Uncharacterised protein family, YncE COP00_09475 7c3d811037b22703630554a2df13ef51 151 Pfam PF10903 Protein of unknown function (DUF2691) 3 150 6.3E-49 T 13-10-2018 IPR020216 Uncharacterised protein family, YncE COP00_20515 03b712a876c6fee1ee078c53ec32a225 102 SUPERFAMILY SSF46785 2 93 5.05E-18 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_20515 03b712a876c6fee1ee078c53ec32a225 102 Gene3D G3DSA:1.10.10.10 3 97 4.4E-16 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_20515 03b712a876c6fee1ee078c53ec32a225 102 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 18 33 4.9E-9 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 COP00_20515 03b712a876c6fee1ee078c53ec32a225 102 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 64 79 4.9E-9 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 COP00_20515 03b712a876c6fee1ee078c53ec32a225 102 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 49 64 4.9E-9 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 COP00_20515 03b712a876c6fee1ee078c53ec32a225 102 Pfam PF12840 Helix-turn-helix domain 17 69 5.2E-9 T 13-10-2018 COP00_20515 03b712a876c6fee1ee078c53ec32a225 102 SMART SM00418 16 93 2.2E-13 T 13-10-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 COP00_22510 491d84d200e6a58e3234d11e497102f0 73 Pfam PF10676 Spore germination protein gerPA/gerPF 1 72 7.8E-28 T 13-10-2018 IPR019618 Spore germination protein GerPA/GerPF COP00_08415 253a8d5a0fd4ca64ca081dc1b0c27cb2 192 Pfam PF14682 Sporulation initiation phospho-transferase B, C-terminal 74 185 1.6E-34 T 13-10-2018 IPR016122 Sporulation initiation phosphotransferase B, C-terminal COP00_08415 253a8d5a0fd4ca64ca081dc1b0c27cb2 192 SMART SM01317 73 187 5.6E-53 T 13-10-2018 IPR016122 Sporulation initiation phosphotransferase B, C-terminal COP00_08415 253a8d5a0fd4ca64ca081dc1b0c27cb2 192 SUPERFAMILY SSF55890 15 190 3.4E-59 T 13-10-2018 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB GO:0000155|GO:0000160|GO:0016772 COP00_08415 253a8d5a0fd4ca64ca081dc1b0c27cb2 192 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 18 71 6.4E-22 T 13-10-2018 IPR039506 SpoOB, alpha-helical domain COP00_08415 253a8d5a0fd4ca64ca081dc1b0c27cb2 192 Gene3D G3DSA:1.10.287.130 1 71 3.1E-30 T 13-10-2018 COP00_08415 253a8d5a0fd4ca64ca081dc1b0c27cb2 192 Gene3D G3DSA:3.30.565.30 72 190 3.9E-33 T 13-10-2018 IPR037100 Sporulation initiation phosphotransferase B, C-terminal domain superfamily COP00_16320 8c6070a85c11ca4990a58bbcba103875 102 TIGRFAM TIGR02892 spore_yabP: sporulation protein YabP 19 102 3.5E-33 T 13-10-2018 IPR012504 Sporulation protein YabP COP00_16320 8c6070a85c11ca4990a58bbcba103875 102 PIRSF PIRSF011576 1 102 1.1E-51 T 13-10-2018 IPR012504 Sporulation protein YabP COP00_16320 8c6070a85c11ca4990a58bbcba103875 102 Pfam PF07873 YabP family 19 84 8.1E-20 T 13-10-2018 IPR022476 Sporulation protein YabP/YqfC COP00_16320 8c6070a85c11ca4990a58bbcba103875 102 Gene3D G3DSA:2.60.40.2000 27 84 2.8E-23 T 13-10-2018 IPR038705 YabP superfamily COP00_16320 8c6070a85c11ca4990a58bbcba103875 102 ProDom PD067726 YABP B.SUBTILIS PRECURSOR UNCHARACTERIZED BH0074 SIGNAL CPE2477 PROTEIN 18 102 7.0E-41 T 13-10-2018 IPR012504 Sporulation protein YabP COP00_09080 56c691895aa37b0c02934e9a17a9354e 240 Pfam PF00486 Transcriptional regulatory protein, C terminal 158 233 8.1E-29 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 COP00_09080 56c691895aa37b0c02934e9a17a9354e 240 Gene3D G3DSA:1.10.10.10 136 238 1.1E-35 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_09080 56c691895aa37b0c02934e9a17a9354e 240 SMART SM00862 157 233 8.6E-28 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 COP00_09080 56c691895aa37b0c02934e9a17a9354e 240 SMART SM00448 3 114 4.3E-48 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 COP00_09080 56c691895aa37b0c02934e9a17a9354e 240 SUPERFAMILY SSF52172 4 120 5.55E-43 T 13-10-2018 IPR011006 CheY-like superfamily COP00_09080 56c691895aa37b0c02934e9a17a9354e 240 Pfam PF00072 Response regulator receiver domain 5 114 5.2E-30 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 COP00_09080 56c691895aa37b0c02934e9a17a9354e 240 Gene3D G3DSA:3.40.50.2300 1 135 7.1E-39 T 13-10-2018 COP00_09080 56c691895aa37b0c02934e9a17a9354e 240 SUPERFAMILY SSF46894 134 234 3.4E-31 T 13-10-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 COP00_03605 306563ffba5d2bd6696f8806c9b1036b 72 ProDom PD048972 UPF0154 TRANSMEMBRANE MEMBRANE UNCHARACTERIZED FAMILY YNEF SUPERFAMILY MG335.1 EXPORTED MYCGA5700 1 41 7.0E-4 T 13-10-2018 IPR005359 Protein with unknown function UPF0154 COP00_03605 306563ffba5d2bd6696f8806c9b1036b 72 Hamap MF_00363 UPF0154 protein . 2 72 22.305 T 13-10-2018 IPR005359 Protein with unknown function UPF0154 COP00_03605 306563ffba5d2bd6696f8806c9b1036b 72 Pfam PF03672 Uncharacterised protein family (UPF0154) 11 69 2.2E-30 T 13-10-2018 IPR005359 Protein with unknown function UPF0154 COP00_23245 fd859bc2ce71284a664a8b1408dafe14 181 Pfam PF16800 IseA DL-endopeptidase inhibitor 27 179 1.8E-53 T 13-10-2018 IPR031841 DL-endopeptidase inhibitor IseA COP00_23245 fd859bc2ce71284a664a8b1408dafe14 181 Gene3D G3DSA:3.10.450.420 23 181 2.0E-57 T 13-10-2018 COP00_09185 afc8d9f35e7d8f0078edb6a6c63aed48 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 209 229 2.0E-29 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_09185 afc8d9f35e7d8f0078edb6a6c63aed48 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 2.0E-29 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_09185 afc8d9f35e7d8f0078edb6a6c63aed48 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 2.0E-29 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_09185 afc8d9f35e7d8f0078edb6a6c63aed48 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 2.0E-29 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_09185 afc8d9f35e7d8f0078edb6a6c63aed48 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 2.0E-29 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_09185 afc8d9f35e7d8f0078edb6a6c63aed48 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 2.0E-29 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_09185 afc8d9f35e7d8f0078edb6a6c63aed48 253 SUPERFAMILY SSF51735 2 247 1.06E-63 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily COP00_09185 afc8d9f35e7d8f0078edb6a6c63aed48 253 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 11 246 3.7E-49 T 13-10-2018 COP00_09185 afc8d9f35e7d8f0078edb6a6c63aed48 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 3.5E-6 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_09185 afc8d9f35e7d8f0078edb6a6c63aed48 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 3.5E-6 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_09185 afc8d9f35e7d8f0078edb6a6c63aed48 253 Gene3D G3DSA:3.40.50.720 1 253 6.5E-69 T 13-10-2018 COP00_13775 1b60057f32348cf45021ab957b6edb5d 338 TIGRFAM TIGR02669 SpoIID_LytB: SpoIID/LytB domain 66 325 8.5E-73 T 13-10-2018 IPR013486 Sporulation stage II protein D, amidase enhancer LytB GO:0030435 COP00_13775 1b60057f32348cf45021ab957b6edb5d 338 Pfam PF08486 Stage II sporulation protein 65 166 4.2E-25 T 13-10-2018 IPR013693 Sporulation stage II protein D, amidase enhancer LytB N-terminal COP00_13775 1b60057f32348cf45021ab957b6edb5d 338 TIGRFAM TIGR02870 spore_II_D: stage II sporulation protein D 3 326 4.1E-129 T 13-10-2018 IPR014225 Sporulation stage II, protein D firmicutes COP00_22475 129c9694e4a40b9e70fea7a7f060eb2f 394 SUPERFAMILY SSF56300 1 327 1.23E-54 T 13-10-2018 COP00_22475 129c9694e4a40b9e70fea7a7f060eb2f 394 Pfam PF00149 Calcineurin-like phosphoesterase 1 224 8.9E-16 T 13-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 COP00_22475 129c9694e4a40b9e70fea7a7f060eb2f 394 Gene3D G3DSA:3.60.21.10 1 272 1.0E-77 T 13-10-2018 IPR029052 Metallo-dependent phosphatase-like COP00_22475 129c9694e4a40b9e70fea7a7f060eb2f 394 TIGRFAM TIGR00619 sbcd: exonuclease SbcCD, D subunit 1 252 3.3E-82 T 13-10-2018 IPR004593 Nuclease SbcCD subunit D GO:0004519|GO:0006259|GO:0008408 COP00_23450 2fce156047015058f855adcedd3bbb16 124 Gene3D G3DSA:2.40.10.270 5 121 3.8E-15 T 13-10-2018 IPR038666 Bacteriophage SPP1, head-tail adaptor superfamily COP00_23450 2fce156047015058f855adcedd3bbb16 124 Pfam PF05521 Phage head-tail joining protein 10 117 6.0E-19 T 13-10-2018 IPR008767 Bacteriophage SPP1, head-tail adaptor COP00_23450 2fce156047015058f855adcedd3bbb16 124 TIGRFAM TIGR01563 gp16_SPP1: putative phage head-tail adaptor 9 81 1.6E-6 T 13-10-2018 IPR008767 Bacteriophage SPP1, head-tail adaptor COP00_05435 ef688f5c9298323b2fc3c58f8ba17389 150 Pfam PF14179 YppG-like protein 50 149 1.5E-29 T 13-10-2018 IPR025555 YppG-like protein COP00_03755 8cbaac5600e26b9f76f15cb8011b10fa 228 Pfam PF02665 Nitrate reductase gamma subunit 4 222 8.8E-86 T 13-10-2018 IPR023234 NarG-like domain COP00_03755 8cbaac5600e26b9f76f15cb8011b10fa 228 Gene3D G3DSA:1.20.950.20 1 214 8.4E-79 T 13-10-2018 COP00_03755 8cbaac5600e26b9f76f15cb8011b10fa 228 TIGRFAM TIGR00351 narI: respiratory nitrate reductase, gamma subunit 1 222 1.7E-98 T 13-10-2018 IPR003816 Nitrate reductase, gamma subunit GO:0008940|GO:0009325|GO:0055114 COP00_03755 8cbaac5600e26b9f76f15cb8011b10fa 228 SUPERFAMILY SSF103501 2 222 3.27E-69 T 13-10-2018 IPR036197 NarG-like superfamily COP00_04675 c219e2cc2b3b8e2b6e6e9efbbef6a7c0 204 Gene3D G3DSA:2.60.20.10 116 204 1.2E-7 T 13-10-2018 COP00_11370 a710ab691a4e78882b5575427281e725 161 SUPERFAMILY SSF55729 1 149 7.9E-32 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase COP00_11370 a710ab691a4e78882b5575427281e725 161 Pfam PF00583 Acetyltransferase (GNAT) family 49 137 3.6E-18 T 13-10-2018 IPR000182 GNAT domain COP00_11370 a710ab691a4e78882b5575427281e725 161 Gene3D G3DSA:3.40.630.30 1 160 3.7E-42 T 13-10-2018 COP00_23095 3367ca6f6a2e6183561945682970c25e 372 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 7 363 3.1E-135 T 13-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 COP00_23095 3367ca6f6a2e6183561945682970c25e 372 Gene3D G3DSA:3.40.640.10 4 247 1.3E-85 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 COP00_23095 3367ca6f6a2e6183561945682970c25e 372 SUPERFAMILY SSF53383 17 365 4.3E-103 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase COP00_23095 3367ca6f6a2e6183561945682970c25e 372 Gene3D G3DSA:3.90.1150.10 279 371 5.8E-24 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 COP00_23095 3367ca6f6a2e6183561945682970c25e 372 Gene3D G3DSA:3.90.1150.10 248 278 5.5E-7 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 COP00_23095 3367ca6f6a2e6183561945682970c25e 372 PIRSF PIRSF001434 1 366 1.2E-121 T 13-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 COP00_23095 3367ca6f6a2e6183561945682970c25e 372 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 189 203 - T 13-10-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 COP00_19690 b368b9894f020f94cb6253808b87b554 63 Pfam PF06341 Protein of unknown function (DUF1056) 13 56 2.0E-5 T 13-10-2018 IPR009406 Protein of unknown function DUF1056 COP00_13925 4badeb9e9808dfd5134ab8e60668ef93 127 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 124 3.9E-20 T 13-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain COP00_13925 4badeb9e9808dfd5134ab8e60668ef93 127 SUPERFAMILY SSF54593 1 126 1.61E-34 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase COP00_13925 4badeb9e9808dfd5134ab8e60668ef93 127 Gene3D G3DSA:3.10.180.10 7 126 3.2E-32 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase COP00_04975 ac9d9be5976e853f5e5ca86d01bc44f3 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 9.8E-11 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_04975 ac9d9be5976e853f5e5ca86d01bc44f3 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 9.8E-11 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_04975 ac9d9be5976e853f5e5ca86d01bc44f3 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 9.8E-11 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_04975 ac9d9be5976e853f5e5ca86d01bc44f3 248 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 241 5.6E-55 T 13-10-2018 COP00_04975 ac9d9be5976e853f5e5ca86d01bc44f3 248 Gene3D G3DSA:3.40.50.720 2 247 1.4E-67 T 13-10-2018 COP00_04975 ac9d9be5976e853f5e5ca86d01bc44f3 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 204 224 1.1E-27 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_04975 ac9d9be5976e853f5e5ca86d01bc44f3 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 1.1E-27 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_04975 ac9d9be5976e853f5e5ca86d01bc44f3 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 1.1E-27 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_04975 ac9d9be5976e853f5e5ca86d01bc44f3 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 1.1E-27 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_04975 ac9d9be5976e853f5e5ca86d01bc44f3 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 1.1E-27 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_04975 ac9d9be5976e853f5e5ca86d01bc44f3 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 6 23 1.1E-27 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_04975 ac9d9be5976e853f5e5ca86d01bc44f3 248 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 COP00_04975 ac9d9be5976e853f5e5ca86d01bc44f3 248 SUPERFAMILY SSF51735 6 241 4.31E-66 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily COP00_00990 2df88d6c441dde02ca744e920100dc2c 430 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 16 417 6.9E-135 T 13-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 COP00_00990 2df88d6c441dde02ca744e920100dc2c 430 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 341 361 - T 13-10-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 COP00_00990 2df88d6c441dde02ca744e920100dc2c 430 Pfam PF00860 Permease family 18 394 3.7E-111 T 13-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 COP00_00535 f3ad79fed8747e0c33a2bbb8e008cec4 184 PIRSF PIRSF004749 2 184 5.1E-49 T 13-10-2018 IPR023635 Peptide deformylase COP00_00535 f3ad79fed8747e0c33a2bbb8e008cec4 184 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 179 5.8E-54 T 13-10-2018 IPR023635 Peptide deformylase COP00_00535 f3ad79fed8747e0c33a2bbb8e008cec4 184 SUPERFAMILY SSF56420 2 177 1.44E-58 T 13-10-2018 IPR036821 Peptide deformylase superfamily COP00_00535 f3ad79fed8747e0c33a2bbb8e008cec4 184 PRINTS PR01576 Peptide deformylase signature 47 76 2.6E-30 T 13-10-2018 IPR023635 Peptide deformylase COP00_00535 f3ad79fed8747e0c33a2bbb8e008cec4 184 PRINTS PR01576 Peptide deformylase signature 121 139 2.6E-30 T 13-10-2018 IPR023635 Peptide deformylase COP00_00535 f3ad79fed8747e0c33a2bbb8e008cec4 184 PRINTS PR01576 Peptide deformylase signature 108 119 2.6E-30 T 13-10-2018 IPR023635 Peptide deformylase COP00_00535 f3ad79fed8747e0c33a2bbb8e008cec4 184 PRINTS PR01576 Peptide deformylase signature 140 169 2.6E-30 T 13-10-2018 IPR023635 Peptide deformylase COP00_00535 f3ad79fed8747e0c33a2bbb8e008cec4 184 Hamap MF_00163 Peptide deformylase [def]. 3 182 27.385 T 13-10-2018 IPR023635 Peptide deformylase COP00_00535 f3ad79fed8747e0c33a2bbb8e008cec4 184 Gene3D G3DSA:3.90.45.10 1 184 2.4E-67 T 13-10-2018 IPR036821 Peptide deformylase superfamily COP00_00535 f3ad79fed8747e0c33a2bbb8e008cec4 184 Pfam PF01327 Polypeptide deformylase 4 171 4.4E-47 T 13-10-2018 IPR023635 Peptide deformylase COP00_08695 f6c6d18f0f6009b4fe2aec720b9781b5 369 SMART SM00909 258 349 3.4E-23 T 13-10-2018 IPR019606 GerMN domain COP00_08695 f6c6d18f0f6009b4fe2aec720b9781b5 369 SMART SM00909 107 197 4.7E-24 T 13-10-2018 IPR019606 GerMN domain COP00_08695 f6c6d18f0f6009b4fe2aec720b9781b5 369 Pfam PF10646 Sporulation and spore germination 230 343 1.2E-17 T 13-10-2018 IPR019606 GerMN domain COP00_08695 f6c6d18f0f6009b4fe2aec720b9781b5 369 Pfam PF10646 Sporulation and spore germination 84 193 1.3E-19 T 13-10-2018 IPR019606 GerMN domain COP00_16330 0d70a356d63581d3183581f4f1e0cb59 125 Pfam PF04977 Septum formation initiator 46 122 1.4E-18 T 13-10-2018 IPR007060 Septum formation initiator FtsL/DivIC COP00_05515 596561ecb3c04542068b8d2a753aea9e 127 Pfam PF02261 Aspartate decarboxylase 1 114 2.9E-54 T 13-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 COP00_05515 596561ecb3c04542068b8d2a753aea9e 127 ProDom PD009294 ASPARTATE 1-DECARBOXYLASE DECARBOXYLASE CHAIN LYASE ALPHA ALPHA- CONTAINS: PRECURSOR BETA 5 98 5.0E-47 T 13-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 COP00_05515 596561ecb3c04542068b8d2a753aea9e 127 TIGRFAM TIGR00223 panD: aspartate 1-decarboxylase 1 126 2.8E-64 T 13-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 COP00_05515 596561ecb3c04542068b8d2a753aea9e 127 PIRSF PIRSF006246 1 125 2.2E-55 T 13-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 COP00_05515 596561ecb3c04542068b8d2a753aea9e 127 Gene3D G3DSA:2.40.40.20 1 125 5.5E-55 T 13-10-2018 COP00_05515 596561ecb3c04542068b8d2a753aea9e 127 SUPERFAMILY SSF50692 1 121 6.21E-52 T 13-10-2018 IPR009010 Aspartate decarboxylase-like domain superfamily COP00_05515 596561ecb3c04542068b8d2a753aea9e 127 Hamap MF_00446 Aspartate 1-decarboxylase [panD]. 1 127 74.946 T 13-10-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 COP00_22120 9f77ff3772e6968dc337b410eec09f40 32 TIGRFAM TIGR01732 tiny_TM_bacill: conserved hypothetical protein 7 31 1.2E-11 T 13-10-2018 IPR010070 Sporulation protein YjcZ-like COP00_22120 9f77ff3772e6968dc337b410eec09f40 32 Pfam PF09680 Protein of unknown function (Tiny_TM_bacill) 8 31 1.1E-10 T 13-10-2018 IPR010070 Sporulation protein YjcZ-like COP00_21070 224389a4619882d24f27691230bf3752 206 Pfam PF00293 NUDIX domain 70 180 3.4E-11 T 13-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 COP00_21070 224389a4619882d24f27691230bf3752 206 Pfam PF12535 Hydrolase of X-linked nucleoside diphosphate N terminal 6 60 4.8E-25 T 13-10-2018 COP00_21070 224389a4619882d24f27691230bf3752 206 Gene3D G3DSA:3.90.79.10 44 203 3.5E-41 T 13-10-2018 COP00_21070 224389a4619882d24f27691230bf3752 206 SUPERFAMILY SSF55811 60 196 4.87E-27 T 13-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 COP00_04290 a12b13b3e6abfcf3e8b38e1f4f75ec84 242 PIRSF PIRSF000857 6 239 1.1E-87 T 13-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 COP00_04290 a12b13b3e6abfcf3e8b38e1f4f75ec84 242 Gene3D G3DSA:3.40.50.620 5 241 9.9E-76 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold COP00_04290 a12b13b3e6abfcf3e8b38e1f4f75ec84 242 TIGRFAM TIGR00434 cysH: phosophoadenylyl-sulfate reductase 27 234 2.9E-91 T 13-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 COP00_04290 a12b13b3e6abfcf3e8b38e1f4f75ec84 242 SUPERFAMILY SSF52402 26 196 5.76E-50 T 13-10-2018 COP00_04290 a12b13b3e6abfcf3e8b38e1f4f75ec84 242 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 38 210 1.1E-50 T 13-10-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824 Reactome: R-HSA-196843 COP00_04290 a12b13b3e6abfcf3e8b38e1f4f75ec84 242 Hamap MF_00063 Phosphoadenosine phosphosulfate reductase [cysH]. 4 234 39.873 T 13-10-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 COP00_04290 a12b13b3e6abfcf3e8b38e1f4f75ec84 242 TIGRFAM TIGR02055 APS_reductase: adenylylsulfate reductase, thioredoxin dependent 44 232 3.2E-74 T 13-10-2018 IPR011798 Adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019344|GO:0055114 KEGG: 00920+1.8.4.8 COP00_21875 8e90786d1027d79780611847dc291ea2 225 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 3 175 1.2E-47 T 13-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 COP00_21875 8e90786d1027d79780611847dc291ea2 225 SUPERFAMILY SSF53187 1 179 9.42E-52 T 13-10-2018 COP00_21875 8e90786d1027d79780611847dc291ea2 225 Gene3D G3DSA:3.40.630.40 1 182 6.8E-55 T 13-10-2018 COP00_21875 8e90786d1027d79780611847dc291ea2 225 SMART SM00646 63 175 9.1E-38 T 13-10-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 COP00_10160 c1e19cdab96dd6c39ad55d945a98de1c 179 Pfam PF01885 RNA 2'-phosphotransferase, Tpt1 / KptA family 5 168 4.6E-31 T 13-10-2018 IPR002745 Phosphotransferase KptA/Tpt1 GO:0006388|GO:0016772 COP00_10160 c1e19cdab96dd6c39ad55d945a98de1c 179 Gene3D G3DSA:1.10.10.970 3 75 2.7E-22 T 13-10-2018 COP00_10160 c1e19cdab96dd6c39ad55d945a98de1c 179 Hamap MF_00299 Probable RNA 2'-phosphotransferase [kptA]. 2 176 29.989 T 13-10-2018 IPR022928 RNA 2'-phosphotransferase KptA, putative GO:0016773 COP00_10160 c1e19cdab96dd6c39ad55d945a98de1c 179 SUPERFAMILY SSF56399 5 177 2.3E-50 T 13-10-2018 COP00_10160 c1e19cdab96dd6c39ad55d945a98de1c 179 Gene3D G3DSA:3.20.170.30 95 179 4.5E-29 T 13-10-2018 COP00_03455 9725ac8463945b800b8aac2dcd5893a1 121 Gene3D G3DSA:2.40.50.140 33 119 1.4E-38 T 13-10-2018 COP00_03455 9725ac8463945b800b8aac2dcd5893a1 121 Pfam PF11518 Protein of unknown function (DUF3221) 15 117 2.7E-18 T 13-10-2018 IPR021598 Protein of unknown function DUF3221 COP00_09830 386772e95a92d3d13d0b5ae300979fdf 443 PIRSF PIRSF006446 1 443 5.9E-104 T 13-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 COP00_09830 386772e95a92d3d13d0b5ae300979fdf 443 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 7 433 2.7E-115 T 13-10-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 COP00_07635 d7eadb88b2aa4fd2a6342e0afe0d5e75 259 Pfam PF01925 Sulfite exporter TauE/SafE 9 252 4.7E-39 T 13-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 COP00_19065 5e78eee7303baccae0c8ffcdbe82dc51 121 SUPERFAMILY SSF52091 5 116 2.35E-19 T 13-10-2018 IPR036513 STAS domain superfamily COP00_19065 5e78eee7303baccae0c8ffcdbe82dc51 121 Gene3D G3DSA:3.30.750.24 3 119 8.5E-33 T 13-10-2018 IPR036513 STAS domain superfamily COP00_19065 5e78eee7303baccae0c8ffcdbe82dc51 121 Pfam PF01740 STAS domain 12 100 8.0E-12 T 13-10-2018 IPR002645 STAS domain COP00_21095 0548f38330eb2578d8539f8e99842cd7 64 ProDom PD053407 YFHD 1 62 3.0E-26 T 13-10-2018 COP00_21095 0548f38330eb2578d8539f8e99842cd7 64 Pfam PF14151 YfhD-like protein 1 61 2.8E-24 T 13-10-2018 IPR025435 YfhD-like protein COP00_18830 577388d05b726b070fd9bb9ed43743dc 309 Gene3D G3DSA:3.40.50.720 1 169 8.2E-28 T 13-10-2018 COP00_18830 577388d05b726b070fd9bb9ed43743dc 309 SUPERFAMILY SSF51735 3 146 2.06E-18 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily COP00_18830 577388d05b726b070fd9bb9ed43743dc 309 Gene3D G3DSA:1.10.3660.10 172 286 2.1E-12 T 13-10-2018 COP00_18830 577388d05b726b070fd9bb9ed43743dc 309 Pfam PF02153 Prephenate dehydrogenase 22 257 8.0E-17 T 13-10-2018 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 COP00_18830 577388d05b726b070fd9bb9ed43743dc 309 SUPERFAMILY SSF48179 165 282 2.61E-22 T 13-10-2018 IPR008927 6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily GO:0055114 COP00_06440 c500112e198edaf368dcfb7af4a64507 280 Pfam PF02096 60Kd inner membrane protein 69 263 2.9E-48 T 13-10-2018 IPR001708 Membrane insertase YidC/ALB3/OXA1/COX18 GO:0016021|GO:0032977 COP00_06440 c500112e198edaf368dcfb7af4a64507 280 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 68 263 5.7E-52 T 13-10-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_06440 c500112e198edaf368dcfb7af4a64507 280 Hamap MF_01811 Membrane protein insertase YidC [yidC]. 10 267 27.231 T 13-10-2018 IPR023060 Membrane insertase YidC/YidC1/YidC2, Firmicutes GO:0016021|GO:0032977 COP00_19030 b363decb41480bfea113642ffc6fdc4a 492 Pfam PF03703 Bacterial PH domain 261 340 5.5E-14 T 13-10-2018 IPR005182 Domain of unknown function DUF304 COP00_19030 b363decb41480bfea113642ffc6fdc4a 492 Pfam PF03703 Bacterial PH domain 404 484 8.4E-10 T 13-10-2018 IPR005182 Domain of unknown function DUF304 COP00_19030 b363decb41480bfea113642ffc6fdc4a 492 Pfam PF03703 Bacterial PH domain 66 144 1.8E-18 T 13-10-2018 IPR005182 Domain of unknown function DUF304 COP00_19030 b363decb41480bfea113642ffc6fdc4a 492 PIRSF PIRSF026631 1 492 3.2E-156 T 13-10-2018 IPR014529 Uncharacterised conserved protein UCP026631 COP00_17040 adeafc364b4a74ed1e978df1df858ef8 123 Gene3D G3DSA:1.10.10.810 1 115 8.3E-54 T 13-10-2018 COP00_17040 adeafc364b4a74ed1e978df1df858ef8 123 SUPERFAMILY SSF159888 1 123 7.46E-43 T 13-10-2018 COP00_17040 adeafc364b4a74ed1e978df1df858ef8 123 Pfam PF08818 Domain of unknown function (DU1801) 18 110 8.9E-13 T 13-10-2018 IPR014922 Domain of unknown function DUF1801 COP00_23845 57add2f9023eb9e8dba33485a8390524 317 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 154 276 5.0E-23 T 13-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain COP00_23845 57add2f9023eb9e8dba33485a8390524 317 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 108 3.9E-11 T 13-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain COP00_23845 57add2f9023eb9e8dba33485a8390524 317 Gene3D G3DSA:3.10.180.10 65 220 7.8E-116 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase COP00_23845 57add2f9023eb9e8dba33485a8390524 317 SUPERFAMILY SSF54593 1 306 2.37E-50 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase COP00_23845 57add2f9023eb9e8dba33485a8390524 317 Gene3D G3DSA:3.10.180.10 5 315 7.8E-116 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase COP00_23865 afccad85540613385e422a2b7ad03954 308 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 303 3.3E-40 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 COP00_23865 afccad85540613385e422a2b7ad03954 308 SUPERFAMILY SSF161098 88 286 6.41E-20 T 13-10-2018 IPR035906 MetI-like superfamily COP00_23865 afccad85540613385e422a2b7ad03954 308 Gene3D G3DSA:1.10.3720.10 83 299 9.5E-22 T 13-10-2018 IPR035906 MetI-like superfamily COP00_16145 6f0e773c3b4721146174baed48a8220d 210 Pfam PF10112 5-bromo-4-chloroindolyl phosphate hydrolysis protein 9 198 3.4E-62 T 13-10-2018 IPR018770 5-bromo-4-chloroindolyl phosphate hydrolysis protein COP00_14055 6c41303e172766aaa52b05be405c9412 276 Pfam PF01564 Spermine/spermidine synthase domain 59 237 9.8E-70 T 13-10-2018 COP00_14055 6c41303e172766aaa52b05be405c9412 276 Pfam PF17284 Spermidine synthase tetramerisation domain 4 56 2.0E-21 T 13-10-2018 IPR035246 Spermidine synthase, tetramerisation domain KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 COP00_14055 6c41303e172766aaa52b05be405c9412 276 Gene3D G3DSA:2.30.140.10 2 53 1.1E-24 T 13-10-2018 IPR037163 Spermidine synthase, tetramerisation domain superfamily KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 COP00_14055 6c41303e172766aaa52b05be405c9412 276 Gene3D G3DSA:3.40.50.150 54 275 5.4E-76 T 13-10-2018 COP00_14055 6c41303e172766aaa52b05be405c9412 276 SUPERFAMILY SSF53335 3 275 7.13E-90 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase COP00_14055 6c41303e172766aaa52b05be405c9412 276 Hamap MF_00198 Polyamine aminopropyltransferase [speE]. 4 276 41.741 T 13-10-2018 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 COP00_14055 6c41303e172766aaa52b05be405c9412 276 TIGRFAM TIGR00417 speE: spermidine synthase 5 270 1.6E-124 T 13-10-2018 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 COP00_14055 6c41303e172766aaa52b05be405c9412 276 ProSitePatterns PS01330 Polyamine biosynthesis (PABS) domain signature. 80 93 - T 13-10-2018 IPR030373 Polyamine biosynthesis domain, conserved site KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 COP00_23695 a5cc62efb7e5268771cc23d981b78ca8 58 Gene3D G3DSA:1.20.5.740 36 58 4.3E-15 T 13-10-2018 COP00_23695 a5cc62efb7e5268771cc23d981b78ca8 58 Pfam PF14185 Antitoxin SpoIISB, type II toxin-antitoxin system 2 58 6.2E-27 T 13-10-2018 IPR025897 Antitoxin SpoIISB COP00_09220 a292f5de26379876a27924911889323f 150 PIRSF PIRSF021377 1 149 6.0E-61 T 13-10-2018 IPR014229 Sporulation protein YtfJ COP00_09220 a292f5de26379876a27924911889323f 150 Pfam PF09579 Sporulation protein YtfJ (Spore_YtfJ) 31 127 1.3E-28 T 13-10-2018 IPR014229 Sporulation protein YtfJ COP00_09220 a292f5de26379876a27924911889323f 150 TIGRFAM TIGR02874 spore_ytfJ: sporulation protein YtfJ 3 136 2.5E-57 T 13-10-2018 IPR014229 Sporulation protein YtfJ COP00_17765 097cac7f2e14752f20d597f199b276eb 181 SUPERFAMILY SSF103473 5 168 2.35E-15 T 13-10-2018 IPR036259 MFS transporter superfamily COP00_17765 097cac7f2e14752f20d597f199b276eb 181 Pfam PF07690 Major Facilitator Superfamily 7 162 2.7E-10 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 COP00_17765 097cac7f2e14752f20d597f199b276eb 181 Gene3D G3DSA:1.20.1250.20 1 178 1.6E-14 T 13-10-2018 COP00_24430 85c242d671aa4a5b3d1170b8c2b58ed5 142 Gene3D G3DSA:1.10.10.10 53 124 5.4E-8 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_24430 85c242d671aa4a5b3d1170b8c2b58ed5 142 SUPERFAMILY SSF88659 74 122 2.43E-9 T 13-10-2018 IPR013324 RNA polymerase sigma factor, region 3/4-like COP00_24430 85c242d671aa4a5b3d1170b8c2b58ed5 142 Pfam PF04545 Sigma-70, region 4 74 118 4.0E-9 T 13-10-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003700|GO:0006352|GO:0006355 COP00_20660 1bc9d299d3711d58a1710889222981c7 106 Pfam PF13021 Domain of unknown function (DUF3885) 62 99 1.2E-16 T 13-10-2018 IPR024976 Domain of unknown function DUF3885 COP00_08310 23cb2d3071f68e957bfb32d698479b99 66 Pfam PF11146 Protein of unknown function (DUF2905) 6 62 2.9E-20 T 13-10-2018 IPR021320 Protein of unknown function DUF2905 COP00_00735 c57de29dd3e78f6b13d171f6c48163af 132 Pfam PF14071 Putative coat protein 11 132 1.0E-41 T 13-10-2018 IPR025953 Putative coat protein YlbD COP00_06965 97e7eb761690d20765998f6c693167d0 65 Pfam PF06014 Bacterial protein of unknown function (DUF910) 1 59 9.3E-25 T 13-10-2018 IPR009256 Protein of unknown function DUF910 COP00_06965 97e7eb761690d20765998f6c693167d0 65 SUPERFAMILY SSF158379 1 59 3.14E-20 T 13-10-2018 IPR023164 YqgQ-like superfamily COP00_06965 97e7eb761690d20765998f6c693167d0 65 Gene3D G3DSA:1.10.287.760 1 65 4.6E-24 T 13-10-2018 IPR023164 YqgQ-like superfamily COP00_22420 81e75e98576bbc6b05412b25465caa2c 189 Pfam PF05067 Manganese containing catalase 1 184 2.4E-75 T 13-10-2018 IPR007760 Manganese catalase COP00_22420 81e75e98576bbc6b05412b25465caa2c 189 SUPERFAMILY SSF47240 1 185 3.64E-69 T 13-10-2018 IPR009078 Ferritin-like superfamily COP00_22420 81e75e98576bbc6b05412b25465caa2c 189 Gene3D G3DSA:1.20.1260.10 1 184 2.4E-64 T 13-10-2018 IPR012347 Ferritin-like COP00_02195 80f3f2ad899e63b82099e0837f547ce7 331 SMART SM00507 274 321 0.0037 T 13-10-2018 IPR003615 HNH nuclease COP00_12955 25e6e2655a82e10a0eb14ef7d9fd8f53 108 ProDom PD070949 MEMBRANE PROTEIN YVLA SPANNING SIMILAR SE2241 LMO0604 LMO2177 LIN2280 INTEGRAL 3 107 3.0E-44 T 13-10-2018 COP00_03830 75447b060960a139e410d71408a5467b 237 TIGRFAM TIGR03652 FeS_repair_RIC: iron-sulfur cluster repair di-iron protein 12 230 3.7E-83 T 13-10-2018 IPR019903 Repair of iron centres family COP00_03830 75447b060960a139e410d71408a5467b 237 Pfam PF01814 Hemerythrin HHE cation binding domain 84 231 5.1E-25 T 13-10-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 COP00_03830 75447b060960a139e410d71408a5467b 237 Gene3D G3DSA:1.20.120.520 65 236 2.9E-20 T 13-10-2018 COP00_03830 75447b060960a139e410d71408a5467b 237 Pfam PF04405 Domain of Unknown function (DUF542) 9 62 1.6E-21 T 13-10-2018 IPR019903 Repair of iron centres family COP00_08000 a872837016b9b5a512725404a35fb252 121 Pfam PF14037 YoqO-like protein 2 116 2.0E-23 T 13-10-2018 IPR025621 YoqO-like protein COP00_13915 46f6ac5eacb1a3727f80897bb345f42b 289 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 4 284 40.593 T 13-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 COP00_13915 46f6ac5eacb1a3727f80897bb345f42b 289 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 3 286 4.2E-80 T 13-10-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 COP00_13915 46f6ac5eacb1a3727f80897bb345f42b 289 Gene3D G3DSA:3.40.50.150 85 288 1.0E-61 T 13-10-2018 COP00_13915 46f6ac5eacb1a3727f80897bb345f42b 289 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 187 193 - T 13-10-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 COP00_13915 46f6ac5eacb1a3727f80897bb345f42b 289 Pfam PF05175 Methyltransferase small domain 116 199 6.1E-15 T 13-10-2018 IPR007848 Methyltransferase small domain GO:0008168 COP00_13915 46f6ac5eacb1a3727f80897bb345f42b 289 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 25 280 2.8E-85 T 13-10-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 COP00_13915 46f6ac5eacb1a3727f80897bb345f42b 289 SUPERFAMILY SSF53335 4 280 7.92E-47 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase COP00_13915 46f6ac5eacb1a3727f80897bb345f42b 289 Gene3D G3DSA:1.10.8.10 3 84 6.2E-16 T 13-10-2018 COP00_13010 68e729e895b6e191bdb3439b9da09bf2 296 Gene3D G3DSA:3.30.70.3040 51 155 4.1E-7 T 13-10-2018 COP00_13010 68e729e895b6e191bdb3439b9da09bf2 296 PIRSF PIRSF003097 1 296 8.9E-99 T 13-10-2018 IPR004513 Cell division protein FtsX GO:0016021 COP00_13010 68e729e895b6e191bdb3439b9da09bf2 296 Pfam PF02687 FtsX-like permease family 199 291 3.8E-9 T 13-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 COP00_09375 e9d5ca411180f21ad5d27456f3f60f86 107 Gene3D G3DSA:3.40.30.10 2 106 1.5E-36 T 13-10-2018 COP00_09375 e9d5ca411180f21ad5d27456f3f60f86 107 TIGRFAM TIGR04019 B_thiol_YtxJ: bacillithiol system protein YtxJ 6 103 1.7E-36 T 13-10-2018 IPR022551 Protein of unknown function DUF2847 COP00_09375 e9d5ca411180f21ad5d27456f3f60f86 107 Pfam PF11009 Protein of unknown function (DUF2847) 7 101 1.1E-35 T 13-10-2018 IPR022551 Protein of unknown function DUF2847 COP00_09375 e9d5ca411180f21ad5d27456f3f60f86 107 SUPERFAMILY SSF52833 5 91 2.55E-9 T 13-10-2018 IPR036249 Thioredoxin-like superfamily COP00_03155 a9058bc7e23094781343b3b2a7b938a9 254 Pfam PF09669 Phage regulatory protein Rha (Phage_pRha) 15 104 1.8E-25 T 13-10-2018 IPR014054 Bacteriophage regulatory protein, Rha family COP00_03155 a9058bc7e23094781343b3b2a7b938a9 254 TIGRFAM TIGR02681 phage_pRha: phage regulatory protein, Rha family 4 107 1.1E-17 T 13-10-2018 IPR014054 Bacteriophage regulatory protein, Rha family COP00_03155 a9058bc7e23094781343b3b2a7b938a9 254 Pfam PF03374 Phage antirepressor protein KilAC domain 140 239 1.2E-31 T 13-10-2018 IPR005039 Antirepressor protein, C-terminal GO:0003677 COP00_15520 eab48cf8ef4013ac3b28c3a75342d36f 198 Gene3D G3DSA:3.20.80.10 2 153 1.6E-14 T 13-10-2018 IPR011256 Regulatory factor, effector binding domain superfamily COP00_15520 eab48cf8ef4013ac3b28c3a75342d36f 198 Pfam PF14526 Integron-associated effector binding protein 5 134 3.1E-25 T 13-10-2018 IPR029441 Integron-associated effector binding protein COP00_11040 054c400b5a794538c284ad5f3195c1e5 53 Pfam PF14115 YuzL-like protein 3 44 2.6E-13 T 13-10-2018 IPR025625 YuzL-like protein COP00_11710 2b44640caeff4318fd6bdc84bbd76249 171 Pfam PF05119 Phage terminase, small subunit 52 157 2.9E-27 T 13-10-2018 IPR006448 Putative phage terminase, small subunit, P27 family COP00_11710 2b44640caeff4318fd6bdc84bbd76249 171 TIGRFAM TIGR01558 sm_term_P27: putative phage terminase, small subunit, P27 family 43 162 5.4E-29 T 13-10-2018 IPR006448 Putative phage terminase, small subunit, P27 family COP00_04730 7808286d4a55e1f579e2c9dfb7affbf8 343 Pfam PF08933 Domain of unknown function (DUF1864) 60 289 9.4E-24 T 13-10-2018 IPR015029 Protein of unknown function DUF1864 COP00_04730 7808286d4a55e1f579e2c9dfb7affbf8 343 Gene3D G3DSA:1.20.58.480 130 339 1.5E-44 T 13-10-2018 COP00_04730 7808286d4a55e1f579e2c9dfb7affbf8 343 SUPERFAMILY SSF140959 57 330 2.88E-27 T 13-10-2018 IPR037217 Tryptophan/Indoleamine 2,3-dioxygenase-like GO:0019441|GO:0020037|GO:0046872 KEGG: 00380+1.13.11.11|Reactome: R-HSA-71240 COP00_09595 f2987741ea5fdee5f61e36100378cca8 292 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 91 284 2.0E-18 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 COP00_09595 f2987741ea5fdee5f61e36100378cca8 292 SUPERFAMILY SSF161098 9 292 4.17E-60 T 13-10-2018 IPR035906 MetI-like superfamily COP00_09595 f2987741ea5fdee5f61e36100378cca8 292 Gene3D G3DSA:1.10.3720.10 2 283 7.7E-73 T 13-10-2018 IPR035906 MetI-like superfamily COP00_23455 10a66ea26fbb964a0676d78779776610 127 TIGRFAM TIGR01725 phge_HK97_gp10: phage protein, HK97 gp10 family 6 124 1.7E-21 T 13-10-2018 IPR010064 Bacteriophage HK97-gp10, putative tail-component COP00_23455 10a66ea26fbb964a0676d78779776610 127 Pfam PF04883 Bacteriophage HK97-gp10, putative tail-component 11 93 5.7E-9 T 13-10-2018 IPR010064 Bacteriophage HK97-gp10, putative tail-component COP00_09675 40859302864c4b969581f27b22c1ae14 292 SUPERFAMILY SSF52540 1 219 5.74E-48 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_09675 40859302864c4b969581f27b22c1ae14 292 Gene3D G3DSA:3.40.50.300 1 237 1.1E-47 T 13-10-2018 COP00_09675 40859302864c4b969581f27b22c1ae14 292 SMART SM00382 26 203 4.1E-11 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_09675 40859302864c4b969581f27b22c1ae14 292 Pfam PF00005 ABC transporter 17 154 7.5E-23 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 COP00_05595 c7b5772a123ff4effcc6f91ca37440ea 148 Pfam PF10673 Protein of unknown function (DUF2487) 9 146 2.1E-50 T 13-10-2018 IPR019615 Protein of unknown function DUF2487 COP00_07190 50bc5a6ecc4614f458eb4395223de728 270 Hamap MF_00921 Putative pyruvate, phosphate dikinase regulatory protein. 4 268 59.91 T 13-10-2018 IPR026565 Putative pyruvate, phosphate dikinase regulatory protein COP00_07190 50bc5a6ecc4614f458eb4395223de728 270 Pfam PF03618 Kinase/pyrophosphorylase 6 262 1.8E-95 T 13-10-2018 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 COP00_11745 3f90587e93b239c7ffb0e83e4d58d272 60 Pfam PF07927 HicA toxin of bacterial toxin-antitoxin, 3 59 5.8E-25 T 13-10-2018 IPR012933 HicA mRNA interferase family GO:0003729 COP00_11745 3f90587e93b239c7ffb0e83e4d58d272 60 Gene3D G3DSA:3.30.920.30 1 59 4.7E-34 T 13-10-2018 IPR038570 HicA superfamily COP00_11745 3f90587e93b239c7ffb0e83e4d58d272 60 SUPERFAMILY SSF54786 1 59 1.77E-20 T 13-10-2018 COP00_20000 0681d573c3e7f9fa26497188e36a95f4 140 SUPERFAMILY SSF54593 3 136 2.82E-29 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase COP00_20000 0681d573c3e7f9fa26497188e36a95f4 140 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 9 135 1.4E-12 T 13-10-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain COP00_20000 0681d573c3e7f9fa26497188e36a95f4 140 Gene3D G3DSA:3.10.180.10 9 140 4.6E-35 T 13-10-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase COP00_18750 3108445b81d620909f412247ccee3fda 337 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 3 330 1.2E-92 T 13-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B COP00_18750 3108445b81d620909f412247ccee3fda 337 SUPERFAMILY SSF50891 198 312 2.35E-8 T 13-10-2018 IPR029000 Cyclophilin-like domain superfamily COP00_18750 3108445b81d620909f412247ccee3fda 337 SMART SM00797 24 323 1.7E-138 T 13-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B COP00_18750 3108445b81d620909f412247ccee3fda 337 Gene3D G3DSA:2.40.100.10 196 335 8.6E-48 T 13-10-2018 IPR029000 Cyclophilin-like domain superfamily COP00_18750 3108445b81d620909f412247ccee3fda 337 Pfam PF02626 Carboxyltransferase domain, subdomain A and B 25 307 3.6E-91 T 13-10-2018 IPR003778 Carboxyltransferase domain, subdomain A and B COP00_11155 8aec0545d358c0581029ca16abf19215 373 Gene3D G3DSA:3.30.300.210 216 369 1.9E-38 T 13-10-2018 IPR038501 Spore germination GerAC superfamily COP00_11155 8aec0545d358c0581029ca16abf19215 373 Gene3D G3DSA:3.10.450.290 24 91 1.9E-7 T 13-10-2018 COP00_11155 8aec0545d358c0581029ca16abf19215 373 Pfam PF05504 Spore germination B3/ GerAC like, C-terminal 202 365 9.0E-28 T 13-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 COP00_11155 8aec0545d358c0581029ca16abf19215 373 TIGRFAM TIGR02887 spore_ger_x_C: germination protein, Ger(x)C family 2 367 2.9E-94 T 13-10-2018 IPR008844 Spore germination GerAC GO:0009847|GO:0016020 COP00_03860 550342e5329827403982d541891427e6 491 Pfam PF13289 SIR2-like domain 105 228 1.9E-25 T 13-10-2018 IPR039444 SIR2-like domain COP00_03860 550342e5329827403982d541891427e6 491 SUPERFAMILY SSF52467 17 237 3.81E-6 T 13-10-2018 IPR029035 DHS-like NAD/FAD-binding domain superfamily COP00_15825 33fbbb8b496b039f33f25c27914b673b 159 Pfam PF07875 Coat F domain 82 139 8.3E-22 T 13-10-2018 IPR012851 Spore coat protein CotF-like COP00_20760 61db3b4d430edef3e117dcfd3560224a 189 Pfam PF00535 Glycosyl transferase family 2 8 144 4.3E-19 T 13-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 COP00_20760 61db3b4d430edef3e117dcfd3560224a 189 Gene3D G3DSA:3.90.550.10 2 176 3.2E-29 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases COP00_20760 61db3b4d430edef3e117dcfd3560224a 189 SUPERFAMILY SSF53448 6 153 3.46E-26 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases COP00_02670 fbb17083acc7a3b9d0ad253bdeceb56a 94 SMART SM00857 2 94 0.0069 T 13-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 COP00_02670 fbb17083acc7a3b9d0ad253bdeceb56a 94 Gene3D G3DSA:3.40.50.1390 1 94 1.4E-14 T 13-10-2018 COP00_02670 fbb17083acc7a3b9d0ad253bdeceb56a 94 SUPERFAMILY SSF53041 1 92 3.92E-11 T 13-10-2018 IPR036162 Resolvase-like, N-terminal catalytic domain superfamily GO:0000150|GO:0003677|GO:0006310 COP00_02670 fbb17083acc7a3b9d0ad253bdeceb56a 94 Pfam PF00239 Resolvase, N terminal domain 2 93 5.5E-11 T 13-10-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 COP00_11590 c6b72a81b98ac0fbef8ebbd77bb8966e 106 Pfam PF08863 YolD-like protein 2 104 4.6E-20 T 13-10-2018 IPR014962 YolD-like protein COP00_16070 d116211d09969141ebab97b3d2630973 439 Gene3D G3DSA:3.10.350.10 59 111 5.7E-11 T 13-10-2018 IPR036779 LysM domain superfamily COP00_16070 d116211d09969141ebab97b3d2630973 439 Pfam PF01476 LysM domain 60 103 3.4E-9 T 13-10-2018 IPR018392 LysM domain COP00_16070 d116211d09969141ebab97b3d2630973 439 Pfam PF01476 LysM domain 11 54 3.7E-15 T 13-10-2018 IPR018392 LysM domain COP00_16070 d116211d09969141ebab97b3d2630973 439 SMART SM00257 59 103 2.4E-7 T 13-10-2018 IPR018392 LysM domain COP00_16070 d116211d09969141ebab97b3d2630973 439 SMART SM00257 10 54 5.6E-17 T 13-10-2018 IPR018392 LysM domain COP00_16070 d116211d09969141ebab97b3d2630973 439 Gene3D G3DSA:3.10.50.10 330 389 5.3E-106 T 13-10-2018 IPR029070 Chitinase insertion domain superfamily COP00_16070 d116211d09969141ebab97b3d2630973 439 Pfam PF00704 Glycosyl hydrolases family 18 167 416 1.0E-25 T 13-10-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 COP00_16070 d116211d09969141ebab97b3d2630973 439 Gene3D G3DSA:3.10.350.10 5 58 6.6E-17 T 13-10-2018 IPR036779 LysM domain superfamily COP00_16070 d116211d09969141ebab97b3d2630973 439 SUPERFAMILY SSF54106 9 54 2.22E-12 T 13-10-2018 COP00_16070 d116211d09969141ebab97b3d2630973 439 SMART SM00636 110 418 4.6E-35 T 13-10-2018 IPR011583 Chitinase II GO:0008061 COP00_16070 d116211d09969141ebab97b3d2630973 439 Gene3D G3DSA:3.20.20.80 137 423 5.3E-106 T 13-10-2018 COP00_16070 d116211d09969141ebab97b3d2630973 439 SUPERFAMILY SSF51445 135 434 1.87E-46 T 13-10-2018 IPR017853 Glycoside hydrolase superfamily COP00_16070 d116211d09969141ebab97b3d2630973 439 SUPERFAMILY SSF54106 58 103 6.41E-9 T 13-10-2018 COP00_09025 17f9271767d45cfe8bb8bfa2d25a657d 468 Pfam PF07261 Replication initiation and membrane attachment 328 393 3.7E-13 T 13-10-2018 IPR006343 DnaD domain COP00_11705 87dff79f2118b10eb0fb0ff3597375ef 569 Pfam PF03354 Phage Terminase 82 550 4.1E-102 T 13-10-2018 IPR005021 Terminase large subunit, Lambdalikevirus-type COP00_11705 87dff79f2118b10eb0fb0ff3597375ef 569 Gene3D G3DSA:3.40.50.300 50 256 1.4E-19 T 13-10-2018 COP00_06370 730e31fe4176ce91a15b352b92115dd4 256 Pfam PF00561 alpha/beta hydrolase fold 30 150 8.5E-13 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 COP00_06370 730e31fe4176ce91a15b352b92115dd4 256 SUPERFAMILY SSF53474 6 239 4.42E-26 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold COP00_06370 730e31fe4176ce91a15b352b92115dd4 256 Gene3D G3DSA:3.40.50.1820 5 241 6.4E-34 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold COP00_13040 dc8abe01a871044acbbce2a1dea5b0c2 186 Gene3D G3DSA:3.30.160.100 1 109 3.4E-29 T 13-10-2018 IPR036567 Ribosome hibernation promotion factor-like COP00_13040 dc8abe01a871044acbbce2a1dea5b0c2 186 Gene3D G3DSA:3.30.505.50 139 185 6.8E-27 T 13-10-2018 IPR038416 Sigma 54 modulation/S30EA ribosomal protein, C-terminal domain superfamily COP00_13040 dc8abe01a871044acbbce2a1dea5b0c2 186 Pfam PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus 125 181 1.0E-29 T 13-10-2018 IPR032528 Sigma 54 modulation/S30EA ribosomal protein, C-terminal COP00_13040 dc8abe01a871044acbbce2a1dea5b0c2 186 Hamap MF_00839 Ribosome hibernation promoting factor [hpf]. 1 185 24.909 T 13-10-2018 IPR034694 Ribosome hibernation promoting factor, long/plastid COP00_13040 dc8abe01a871044acbbce2a1dea5b0c2 186 SUPERFAMILY SSF69754 3 105 4.84E-31 T 13-10-2018 IPR036567 Ribosome hibernation promotion factor-like COP00_13040 dc8abe01a871044acbbce2a1dea5b0c2 186 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 102 2.0E-33 T 13-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 COP00_13040 dc8abe01a871044acbbce2a1dea5b0c2 186 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 4 95 7.7E-28 T 13-10-2018 IPR003489 Ribosome hibernation promoting factor/RaiA GO:0044238 COP00_08885 5b02815559ac4bf0a3590723ad3a4e60 159 Pfam PF03703 Bacterial PH domain 72 146 2.9E-15 T 13-10-2018 IPR005182 Domain of unknown function DUF304 COP00_03250 4a9287404b8af3f64c0da554d3a57550 171 Pfam PF05119 Phage terminase, small subunit 52 157 1.2E-27 T 13-10-2018 IPR006448 Putative phage terminase, small subunit, P27 family COP00_03250 4a9287404b8af3f64c0da554d3a57550 171 TIGRFAM TIGR01558 sm_term_P27: putative phage terminase, small subunit, P27 family 43 162 3.6E-29 T 13-10-2018 IPR006448 Putative phage terminase, small subunit, P27 family COP00_06330 389bbff543b6d507b591c61f306a2860 96 Gene3D G3DSA:3.40.50.12780 8 82 2.6E-5 T 13-10-2018 COP00_07440 cb593ce1708dafd236ca32e37eb273f9 255 Pfam PF12746 GNAT acetyltransferase 15 251 7.0E-49 T 13-10-2018 IPR027365 GNAT acetyltransferase YdfB-like COP00_07440 cb593ce1708dafd236ca32e37eb273f9 255 SUPERFAMILY SSF55729 161 251 9.76E-17 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase COP00_07440 cb593ce1708dafd236ca32e37eb273f9 255 Gene3D G3DSA:3.40.630.30 92 242 3.3E-32 T 13-10-2018 COP00_21955 725390fb89e8214000a37ab96cae16c1 622 Gene3D G3DSA:3.40.50.720 157 327 9.0E-15 T 13-10-2018 COP00_21955 725390fb89e8214000a37ab96cae16c1 622 TIGRFAM TIGR03693 ocin_ThiF_like: putative thiazole-containing bacteriocin maturation protein 1 621 5.6E-248 T 13-10-2018 IPR022368 Putative thiazole-containing bacteriocin maturation protein COP00_13670 2e47f7c47c21bf15e709aa459eb2d85c 74 SMART SM00923 3 53 3.5E-29 T 13-10-2018 IPR005153 MbtH-like domain COP00_13670 2e47f7c47c21bf15e709aa459eb2d85c 74 Gene3D G3DSA:3.90.820.10 1 64 2.0E-30 T 13-10-2018 COP00_13670 2e47f7c47c21bf15e709aa459eb2d85c 74 Pfam PF03621 MbtH-like protein 1 52 1.3E-26 T 13-10-2018 IPR005153 MbtH-like domain COP00_13670 2e47f7c47c21bf15e709aa459eb2d85c 74 SUPERFAMILY SSF160582 1 66 4.18E-28 T 13-10-2018 IPR038020 MbtH-like domain superfamily COP00_21410 e2c8475eaae02c16c1fa918ad41249f2 67 SUPERFAMILY SSF47413 2 64 6.7E-17 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 COP00_21410 e2c8475eaae02c16c1fa918ad41249f2 67 SMART SM00530 4 59 2.6E-13 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 COP00_21410 e2c8475eaae02c16c1fa918ad41249f2 67 Gene3D G3DSA:1.10.260.40 1 65 1.6E-23 T 13-10-2018 COP00_21410 e2c8475eaae02c16c1fa918ad41249f2 67 Pfam PF01381 Helix-turn-helix 5 58 4.3E-14 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 COP00_19240 9740b8ecabf8dc49d9f933eff725de95 291 SUPERFAMILY SSF103481 186 289 5.75E-18 T 13-10-2018 COP00_19240 9740b8ecabf8dc49d9f933eff725de95 291 SUPERFAMILY SSF103481 41 142 1.83E-12 T 13-10-2018 COP00_19240 9740b8ecabf8dc49d9f933eff725de95 291 Pfam PF00892 EamA-like transporter family 151 287 1.3E-27 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 COP00_19240 9740b8ecabf8dc49d9f933eff725de95 291 Pfam PF00892 EamA-like transporter family 6 139 8.1E-23 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 COP00_15770 4ca507011f46c1c56cb9ac43435ffd5c 43 Pfam PF14174 YycC-like protein 2 43 1.1E-20 T 13-10-2018 IPR025550 YycC-like protein COP00_11275 eeb23f644fd5451e10520f0c88e80661 473 Hamap MF_00675 Uronate isomerase [uxaC]. 2 465 50.208 T 13-10-2018 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248 COP00_11275 eeb23f644fd5451e10520f0c88e80661 473 SUPERFAMILY SSF51556 2 464 1.09E-183 T 13-10-2018 IPR032466 Metal-dependent hydrolase COP00_11275 eeb23f644fd5451e10520f0c88e80661 473 Gene3D G3DSA:1.10.2020.10 46 136 1.1E-194 T 13-10-2018 COP00_11275 eeb23f644fd5451e10520f0c88e80661 473 Gene3D G3DSA:3.20.20.140 7 463 1.1E-194 T 13-10-2018 COP00_11275 eeb23f644fd5451e10520f0c88e80661 473 Pfam PF02614 Glucuronate isomerase 2 463 2.0E-229 T 13-10-2018 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248 COP00_11050 209665a8926daca9732ebeb325fb7990 113 Pfam PF07875 Coat F domain 23 85 1.4E-21 T 13-10-2018 IPR012851 Spore coat protein CotF-like COP00_21985 7bfc1e15bb9f93cb535996bb951588f7 203 Pfam PF13460 NAD(P)H-binding 7 190 9.5E-33 T 13-10-2018 IPR016040 NAD(P)-binding domain COP00_21985 7bfc1e15bb9f93cb535996bb951588f7 203 SUPERFAMILY SSF51735 1 197 9.51E-27 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily COP00_21985 7bfc1e15bb9f93cb535996bb951588f7 203 Gene3D G3DSA:3.40.50.720 1 202 3.4E-36 T 13-10-2018 COP00_05820 6b92405f5a86cb01f5a91fccbf4409d8 150 Pfam PF10864 Protein of unknown function (DUF2663) 22 148 3.4E-49 T 13-10-2018 IPR020210 Uncharacterised protein family, YpbF, transmembrane COP00_05820 6b92405f5a86cb01f5a91fccbf4409d8 150 ProDom PD089241 YPBF MEMBRANE BH1610 TRANSMEMBRANE 20 148 3.0E-53 T 13-10-2018 IPR020210 Uncharacterised protein family, YpbF, transmembrane COP00_15660 b2e8ca1e925cd7e884e4ce55ec731def 126 Pfam PF09683 Bacteriocin (Lactococcin_972) 54 122 1.0E-11 T 13-10-2018 IPR006540 Bacteriocin, lactococcin 972 COP00_15660 b2e8ca1e925cd7e884e4ce55ec731def 126 Gene3D G3DSA:2.60.40.2850 55 124 3.3E-6 T 13-10-2018 COP00_22335 cd2d7c58099e804ff5a58e998823e8ea 285 Gene3D G3DSA:3.40.50.720 3 282 2.7E-86 T 13-10-2018 COP00_22335 cd2d7c58099e804ff5a58e998823e8ea 285 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 177 205 - T 13-10-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 COP00_22335 cd2d7c58099e804ff5a58e998823e8ea 285 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 164 180 6.7E-38 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_22335 cd2d7c58099e804ff5a58e998823e8ea 285 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 190 209 6.7E-38 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_22335 cd2d7c58099e804ff5a58e998823e8ea 285 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 245 265 6.7E-38 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_22335 cd2d7c58099e804ff5a58e998823e8ea 285 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 118 129 6.7E-38 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_22335 cd2d7c58099e804ff5a58e998823e8ea 285 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 43 60 6.7E-38 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_22335 cd2d7c58099e804ff5a58e998823e8ea 285 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 211 228 6.7E-38 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_22335 cd2d7c58099e804ff5a58e998823e8ea 285 SUPERFAMILY SSF51735 41 283 5.03E-84 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily COP00_22335 cd2d7c58099e804ff5a58e998823e8ea 285 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 51 280 2.7E-62 T 13-10-2018 COP00_22335 cd2d7c58099e804ff5a58e998823e8ea 285 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 118 129 1.5E-9 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_22335 cd2d7c58099e804ff5a58e998823e8ea 285 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 190 209 1.5E-9 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_22335 cd2d7c58099e804ff5a58e998823e8ea 285 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 170 178 1.5E-9 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_19745 8fde9ba5be072d675a89d44b5267a977 1489 Pfam PF01464 Transglycosylase SLT domain 1248 1342 9.9E-16 T 13-10-2018 IPR008258 Transglycosylase SLT domain 1 COP00_19745 8fde9ba5be072d675a89d44b5267a977 1489 Pfam PF10145 Phage-related minor tail protein 207 405 2.0E-51 T 13-10-2018 IPR010090 Phage tail tape measure protein COP00_19745 8fde9ba5be072d675a89d44b5267a977 1489 TIGRFAM TIGR01760 tape_meas_TP901: phage tail tape measure protein, TP901 family, core region 167 506 2.0E-87 T 13-10-2018 IPR010090 Phage tail tape measure protein COP00_19745 8fde9ba5be072d675a89d44b5267a977 1489 SUPERFAMILY SSF53955 1231 1380 5.63E-17 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily COP00_19745 8fde9ba5be072d675a89d44b5267a977 1489 Gene3D G3DSA:1.10.530.10 1229 1376 7.1E-10 T 13-10-2018 COP00_09545 37b64f3743b4d04fe4006fa4b225f7e6 104 SUPERFAMILY SSF52821 2 102 5.24E-29 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily COP00_09545 37b64f3743b4d04fe4006fa4b225f7e6 104 SMART SM00450 6 101 1.4E-15 T 13-10-2018 IPR001763 Rhodanese-like domain COP00_09545 37b64f3743b4d04fe4006fa4b225f7e6 104 Pfam PF00581 Rhodanese-like domain 7 96 1.6E-12 T 13-10-2018 IPR001763 Rhodanese-like domain COP00_09545 37b64f3743b4d04fe4006fa4b225f7e6 104 Gene3D G3DSA:3.40.250.10 3 99 1.1E-26 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily COP00_13200 6e8d0ddcc75f4b441de1ef525f47060f 219 Pfam PF02397 Bacterial sugar transferase 34 213 2.5E-66 T 13-10-2018 IPR003362 Bacterial sugar transferase COP00_13200 6e8d0ddcc75f4b441de1ef525f47060f 219 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 28 219 2.3E-89 T 13-10-2018 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase COP00_04350 e212abdab0c1998ac34d676af4b53726 524 Pfam PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase 46 356 4.0E-17 T 13-10-2018 IPR002591 Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase GO:0003824 COP00_04350 e212abdab0c1998ac34d676af4b53726 524 Gene3D G3DSA:3.40.720.10 26 400 4.6E-29 T 13-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 COP00_04350 e212abdab0c1998ac34d676af4b53726 524 SUPERFAMILY SSF53649 40 519 3.05E-46 T 13-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 COP00_22890 fcbea8d29b68d529decf9ca290c210ac 382 Pfam PF06054 Competence protein CoiA-like family 7 295 4.8E-61 T 13-10-2018 IPR010330 Competence-induced protein CoiA-like COP00_22890 fcbea8d29b68d529decf9ca290c210ac 382 PIRSF PIRSF007487 1 382 1.0E-87 T 13-10-2018 IPR021176 Competence-induced protein CoiA COP00_06745 1f20504b2d352703df1a0eeaaccd59c6 58 Pfam PF08671 Anti-repressor SinI 11 37 1.7E-12 T 13-10-2018 IPR010981 SinR repressor/SinI anti-repressor, dimerisation domain GO:0006355|GO:0046983 COP00_06745 1f20504b2d352703df1a0eeaaccd59c6 58 SUPERFAMILY SSF47406 11 42 3.4E-9 T 13-10-2018 IPR036281 SinR repressor/SinI anti-repressor, dimerisation domain superfamily GO:0006355|GO:0046983 COP00_00600 247649588cdafccc1fd6fa7b3e09f532 264 PRINTS PR00377 Inositol monophosphatase superfamily signature 210 234 3.7E-41 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 COP00_00600 247649588cdafccc1fd6fa7b3e09f532 264 PRINTS PR00377 Inositol monophosphatase superfamily signature 179 200 3.7E-41 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 COP00_00600 247649588cdafccc1fd6fa7b3e09f532 264 PRINTS PR00377 Inositol monophosphatase superfamily signature 40 60 3.7E-41 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 COP00_00600 247649588cdafccc1fd6fa7b3e09f532 264 PRINTS PR00377 Inositol monophosphatase superfamily signature 133 156 3.7E-41 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 COP00_00600 247649588cdafccc1fd6fa7b3e09f532 264 PRINTS PR00377 Inositol monophosphatase superfamily signature 84 100 3.7E-41 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 COP00_00600 247649588cdafccc1fd6fa7b3e09f532 264 PRINTS PR00377 Inositol monophosphatase superfamily signature 62 78 3.7E-41 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 COP00_00600 247649588cdafccc1fd6fa7b3e09f532 264 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 213 227 - T 13-10-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 COP00_00600 247649588cdafccc1fd6fa7b3e09f532 264 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 84 97 - T 13-10-2018 IPR020583 Inositol monophosphatase, metal-binding site COP00_00600 247649588cdafccc1fd6fa7b3e09f532 264 SUPERFAMILY SSF56655 3 257 3.8E-77 T 13-10-2018 COP00_00600 247649588cdafccc1fd6fa7b3e09f532 264 Gene3D G3DSA:3.40.190.80 145 262 3.5E-34 T 13-10-2018 COP00_00600 247649588cdafccc1fd6fa7b3e09f532 264 Gene3D G3DSA:3.30.540.10 1 144 2.1E-46 T 13-10-2018 COP00_00600 247649588cdafccc1fd6fa7b3e09f532 264 Pfam PF00459 Inositol monophosphatase family 5 254 2.4E-67 T 13-10-2018 IPR000760 Inositol monophosphatase-like GO:0046854 COP00_24465 3bf2a68214764d70a3377a9a1e25308c 72 Pfam PF01381 Helix-turn-helix 7 58 1.1E-12 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 COP00_24465 3bf2a68214764d70a3377a9a1e25308c 72 SUPERFAMILY SSF47413 3 58 8.3E-13 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 COP00_24465 3bf2a68214764d70a3377a9a1e25308c 72 SMART SM00530 6 62 8.3E-10 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 COP00_24465 3bf2a68214764d70a3377a9a1e25308c 72 Gene3D G3DSA:1.10.260.40 1 71 5.5E-13 T 13-10-2018 COP00_03695 28da6a40474776c23d28d99739682385 137 Pfam PF13380 CoA binding domain 17 131 2.8E-37 T 13-10-2018 IPR003781 CoA-binding GO:0048037 COP00_03695 28da6a40474776c23d28d99739682385 137 SUPERFAMILY SSF51735 6 133 7.14E-41 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily COP00_03695 28da6a40474776c23d28d99739682385 137 Gene3D G3DSA:3.40.50.720 1 136 4.5E-40 T 13-10-2018 COP00_03695 28da6a40474776c23d28d99739682385 137 SMART SM00881 13 105 2.9E-18 T 13-10-2018 IPR003781 CoA-binding GO:0048037 COP00_01990 9858271fb6eb2b6efb5655dd9a683722 461 SUPERFAMILY SSF103473 12 461 1.83E-55 T 13-10-2018 IPR036259 MFS transporter superfamily COP00_01990 9858271fb6eb2b6efb5655dd9a683722 461 Gene3D G3DSA:1.20.1720.10 23 246 1.1E-38 T 13-10-2018 COP00_01990 9858271fb6eb2b6efb5655dd9a683722 461 Pfam PF07690 Major Facilitator Superfamily 24 405 5.8E-45 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 COP00_01990 9858271fb6eb2b6efb5655dd9a683722 461 PRINTS PR01036 Tetracycline resistance protein TetB signature 354 374 2.2E-111 T 13-10-2018 COP00_01990 9858271fb6eb2b6efb5655dd9a683722 461 PRINTS PR01036 Tetracycline resistance protein TetB signature 229 247 2.2E-111 T 13-10-2018 COP00_01990 9858271fb6eb2b6efb5655dd9a683722 461 PRINTS PR01036 Tetracycline resistance protein TetB signature 208 226 2.2E-111 T 13-10-2018 COP00_01990 9858271fb6eb2b6efb5655dd9a683722 461 PRINTS PR01036 Tetracycline resistance protein TetB signature 396 415 2.2E-111 T 13-10-2018 COP00_01990 9858271fb6eb2b6efb5655dd9a683722 461 PRINTS PR01036 Tetracycline resistance protein TetB signature 83 105 2.2E-111 T 13-10-2018 COP00_01990 9858271fb6eb2b6efb5655dd9a683722 461 PRINTS PR01036 Tetracycline resistance protein TetB signature 115 135 2.2E-111 T 13-10-2018 COP00_01990 9858271fb6eb2b6efb5655dd9a683722 461 PRINTS PR01036 Tetracycline resistance protein TetB signature 263 288 2.2E-111 T 13-10-2018 COP00_01990 9858271fb6eb2b6efb5655dd9a683722 461 PRINTS PR01036 Tetracycline resistance protein TetB signature 299 323 2.2E-111 T 13-10-2018 COP00_01990 9858271fb6eb2b6efb5655dd9a683722 461 PRINTS PR01036 Tetracycline resistance protein TetB signature 23 47 2.2E-111 T 13-10-2018 COP00_01990 9858271fb6eb2b6efb5655dd9a683722 461 PRINTS PR01036 Tetracycline resistance protein TetB signature 170 194 2.2E-111 T 13-10-2018 COP00_01990 9858271fb6eb2b6efb5655dd9a683722 461 PRINTS PR01036 Tetracycline resistance protein TetB signature 334 354 2.2E-111 T 13-10-2018 COP00_01990 9858271fb6eb2b6efb5655dd9a683722 461 PRINTS PR01036 Tetracycline resistance protein TetB signature 145 169 2.2E-111 T 13-10-2018 COP00_01990 9858271fb6eb2b6efb5655dd9a683722 461 Gene3D G3DSA:1.20.1250.20 255 461 2.0E-19 T 13-10-2018 COP00_17615 13c5be7be00e3c64042a538dab20fea4 243 Pfam PF04794 YdjC-like protein 3 229 2.1E-57 T 13-10-2018 IPR006879 Carbohydrate deacetylase YdjC-like COP00_17615 13c5be7be00e3c64042a538dab20fea4 243 SUPERFAMILY SSF88713 2 243 6.67E-68 T 13-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 COP00_17615 13c5be7be00e3c64042a538dab20fea4 243 Gene3D G3DSA:3.20.20.370 1 243 2.0E-74 T 13-10-2018 COP00_15200 dd9d9ceba3e313cae3129fe3a5650be7 367 Pfam PF13424 Tetratricopeptide repeat 179 242 1.6E-7 T 13-10-2018 COP00_15200 dd9d9ceba3e313cae3129fe3a5650be7 367 SMART SM00028 132 165 59.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 COP00_15200 dd9d9ceba3e313cae3129fe3a5650be7 367 SMART SM00028 213 246 0.019 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 COP00_15200 dd9d9ceba3e313cae3129fe3a5650be7 367 SMART SM00028 252 285 73.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 COP00_15200 dd9d9ceba3e313cae3129fe3a5650be7 367 SMART SM00028 326 359 220.0 T 13-10-2018 IPR019734 Tetratricopeptide repeat GO:0005515 COP00_15200 dd9d9ceba3e313cae3129fe3a5650be7 367 SUPERFAMILY SSF48452 111 361 6.96E-16 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 COP00_15200 dd9d9ceba3e313cae3129fe3a5650be7 367 Gene3D G3DSA:1.25.40.10 1 364 4.0E-100 T 13-10-2018 IPR011990 Tetratricopeptide-like helical domain superfamily GO:0005515 COP00_23900 994232d918f09c203a1701aec5eb6199 337 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 231 298 1.4E-17 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 COP00_23900 994232d918f09c203a1701aec5eb6199 337 SUPERFAMILY SSF52540 6 251 8.47E-74 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_23900 994232d918f09c203a1701aec5eb6199 337 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 230 318 7.0E-28 T 13-10-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 COP00_23900 994232d918f09c203a1701aec5eb6199 337 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 13-10-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 COP00_23900 994232d918f09c203a1701aec5eb6199 337 SMART SM00382 36 229 1.3E-11 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_23900 994232d918f09c203a1701aec5eb6199 337 Gene3D G3DSA:3.40.50.300 4 333 4.8E-104 T 13-10-2018 COP00_23900 994232d918f09c203a1701aec5eb6199 337 Pfam PF00005 ABC transporter 28 179 8.0E-32 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 COP00_23625 e79f3f768bf483fc78619cd9f8d118a4 260 Pfam PF01695 IstB-like ATP binding protein 109 222 3.6E-9 T 13-10-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 COP00_23625 e79f3f768bf483fc78619cd9f8d118a4 260 SUPERFAMILY SSF52540 76 244 1.89E-15 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_23625 e79f3f768bf483fc78619cd9f8d118a4 260 SMART SM00382 110 236 4.1E-5 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_23625 e79f3f768bf483fc78619cd9f8d118a4 260 Gene3D G3DSA:3.40.50.300 61 242 4.1E-34 T 13-10-2018 COP00_06240 7d3e6dac1b11d2eeadd8482d3130fbb3 156 Pfam PF00583 Acetyltransferase (GNAT) family 32 124 5.7E-19 T 13-10-2018 IPR000182 GNAT domain COP00_06240 7d3e6dac1b11d2eeadd8482d3130fbb3 156 PIRSF PIRSF037663 1 156 5.7E-74 T 13-10-2018 IPR017255 Acetyltransferase, GNAT, predicted COP00_06240 7d3e6dac1b11d2eeadd8482d3130fbb3 156 SUPERFAMILY SSF55729 1 156 1.06E-27 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase COP00_06240 7d3e6dac1b11d2eeadd8482d3130fbb3 156 Gene3D G3DSA:3.40.630.30 1 156 4.1E-48 T 13-10-2018 COP00_12295 bb72dc362bce2437968bbdb1c8974ab5 67 SUPERFAMILY SSF47413 3 56 2.76E-10 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 COP00_12295 bb72dc362bce2437968bbdb1c8974ab5 67 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 4 66 7.9E-10 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 COP00_12295 bb72dc362bce2437968bbdb1c8974ab5 67 SMART SM00530 4 60 6.0E-5 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 COP00_12295 bb72dc362bce2437968bbdb1c8974ab5 67 Gene3D G3DSA:1.10.260.40 1 64 3.1E-11 T 13-10-2018 COP00_08125 9bcad3c89c9631e6f0ed4050bc7d9487 88 Hamap MF_01507 UPF0297 protein . 1 85 28.237 T 13-10-2018 IPR009309 Uncharacterised protein family UPF0297 COP00_08125 9bcad3c89c9631e6f0ed4050bc7d9487 88 Pfam PF06135 Bacterial protein of unknown function (DUF965) 5 83 1.9E-37 T 13-10-2018 IPR009309 Uncharacterised protein family UPF0297 COP00_08125 9bcad3c89c9631e6f0ed4050bc7d9487 88 PIRSF PIRSF037258 1 88 4.0E-45 T 13-10-2018 IPR009309 Uncharacterised protein family UPF0297 COP00_14485 39100ddca2df8b2874e730142bc1f9af 317 Pfam PF00294 pfkB family carbohydrate kinase 3 299 6.6E-62 T 13-10-2018 IPR011611 Carbohydrate kinase PfkB COP00_14485 39100ddca2df8b2874e730142bc1f9af 317 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 251 264 - T 13-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 COP00_14485 39100ddca2df8b2874e730142bc1f9af 317 Gene3D G3DSA:3.40.1190.20 1 312 1.1E-93 T 13-10-2018 IPR029056 Ribokinase-like COP00_14485 39100ddca2df8b2874e730142bc1f9af 317 SUPERFAMILY SSF53613 1 307 2.49E-82 T 13-10-2018 IPR029056 Ribokinase-like COP00_14170 888a06f389488018f213de5b94649792 183 TIGRFAM TIGR02728 spore_gerQ: spore coat protein GerQ 94 175 1.9E-46 T 13-10-2018 IPR014099 Spore coat protein GerQ COP00_14170 888a06f389488018f213de5b94649792 183 PIRSF PIRSF038931 6 183 3.3E-59 T 13-10-2018 IPR014099 Spore coat protein GerQ COP00_14170 888a06f389488018f213de5b94649792 183 Pfam PF09671 Spore coat protein (Spore_GerQ) 97 171 1.6E-41 T 13-10-2018 IPR014099 Spore coat protein GerQ COP00_18885 9aded305d00a28ca7f4b12151c8dbf51 426 PRINTS PR00447 Natural resistance-associated macrophage protein signature 137 156 4.9E-31 T 13-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 COP00_18885 9aded305d00a28ca7f4b12151c8dbf51 426 PRINTS PR00447 Natural resistance-associated macrophage protein signature 212 235 4.9E-31 T 13-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 COP00_18885 9aded305d00a28ca7f4b12151c8dbf51 426 PRINTS PR00447 Natural resistance-associated macrophage protein signature 162 183 4.9E-31 T 13-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 COP00_18885 9aded305d00a28ca7f4b12151c8dbf51 426 PRINTS PR00447 Natural resistance-associated macrophage protein signature 109 135 4.9E-31 T 13-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 COP00_18885 9aded305d00a28ca7f4b12151c8dbf51 426 PRINTS PR00447 Natural resistance-associated macrophage protein signature 314 333 4.9E-31 T 13-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 COP00_18885 9aded305d00a28ca7f4b12151c8dbf51 426 Hamap MF_00221 Divalent metal cation transporter MntH [mntH]. 13 424 38.623 T 13-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 COP00_18885 9aded305d00a28ca7f4b12151c8dbf51 426 TIGRFAM TIGR01197 nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 29 392 2.1E-130 T 13-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 COP00_18885 9aded305d00a28ca7f4b12151c8dbf51 426 Pfam PF01566 Natural resistance-associated macrophage protein 50 398 8.3E-115 T 13-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 COP00_18985 2ee26f6645013b652cfdc09552076b0a 51 Pfam PF13040 Fur-regulated basic protein B 2 39 1.4E-15 T 13-10-2018 IPR025004 Transcriptional regulatory protein SenN/SenS COP00_18020 ad6346a2dcb9e283d1161f4289ca2c3a 369 Pfam PF11202 Phosphoribosyl transferase (PRTase) 9 257 8.9E-111 T 13-10-2018 IPR011215 Phosphoribosyl transferase COP00_18020 ad6346a2dcb9e283d1161f4289ca2c3a 369 Pfam PF15608 PELOTA RNA binding domain 284 363 2.5E-33 T 13-10-2018 IPR028157 PELOTA RNA-binding domain COP00_18020 ad6346a2dcb9e283d1161f4289ca2c3a 369 PIRSF PIRSF020979 1 363 2.3E-92 T 13-10-2018 IPR011215 Phosphoribosyl transferase COP00_10860 0e0ed572139ddeb539276a41418cb9e7 271 SUPERFAMILY SSF54060 49 261 2.12E-57 T 13-10-2018 COP00_10860 0e0ed572139ddeb539276a41418cb9e7 271 Pfam PF04231 Endonuclease I 52 261 2.4E-44 T 13-10-2018 IPR007346 Endonuclease I GO:0004518 COP00_14755 37af236f05aff2fa2b05473c1fd299bf 262 ProSitePatterns PS01005 Formate and nitrite transporters signature 1. 76 85 - T 13-10-2018 IPR024002 Formate/nitrite transporter, conserved site COP00_14755 37af236f05aff2fa2b05473c1fd299bf 262 Pfam PF01226 Formate/nitrite transporter 12 251 5.0E-62 T 13-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 COP00_14755 37af236f05aff2fa2b05473c1fd299bf 262 ProSitePatterns PS01006 Formate and nitrite transporters signature 2. 160 170 - T 13-10-2018 IPR024002 Formate/nitrite transporter, conserved site COP00_14755 37af236f05aff2fa2b05473c1fd299bf 262 TIGRFAM TIGR00790 fnt: formate/nitrite transporter 21 253 1.2E-71 T 13-10-2018 IPR000292 Formate/nitrite transporter GO:0016020|GO:0022857|GO:0055085 COP00_14755 37af236f05aff2fa2b05473c1fd299bf 262 Gene3D G3DSA:1.20.1080.10 2 260 2.7E-74 T 13-10-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 COP00_07445 bae11357f2e03b101338781cc69c6d30 122 Pfam PF10057 Uncharacterized conserved protein (DUF2294) 4 111 3.7E-34 T 13-10-2018 IPR018745 Domain of unknown function DUF2294 COP00_21075 7fb0eeb59feaeeaaa851e9e1f472b606 178 Pfam PF12867 DinB superfamily 30 168 5.9E-16 T 13-10-2018 IPR024775 DinB-like domain COP00_21075 7fb0eeb59feaeeaaa851e9e1f472b606 178 Hamap MF_01256 Putative metal-dependent hydrolase . 4 178 38.551 T 13-10-2018 IPR023774 Putative metal-dependent hydrolase YfiT COP00_21075 7fb0eeb59feaeeaaa851e9e1f472b606 178 SUPERFAMILY SSF109854 5 177 1.68E-46 T 13-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes COP00_21075 7fb0eeb59feaeeaaa851e9e1f472b606 178 Gene3D G3DSA:1.20.120.450 2 178 1.8E-50 T 13-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes COP00_21965 63e462364e3c85c14185141c5e43140c 164 Pfam PF00582 Universal stress protein family 5 47 1.2E-10 T 13-10-2018 IPR006016 UspA COP00_21965 63e462364e3c85c14185141c5e43140c 164 Pfam PF00582 Universal stress protein family 79 164 3.5E-20 T 13-10-2018 IPR006016 UspA COP00_21965 63e462364e3c85c14185141c5e43140c 164 SUPERFAMILY SSF52402 4 164 7.85E-32 T 13-10-2018 COP00_21965 63e462364e3c85c14185141c5e43140c 164 PRINTS PR01438 Universal stress protein signature 4 22 5.7E-14 T 13-10-2018 IPR006015 Universal stress protein A COP00_21965 63e462364e3c85c14185141c5e43140c 164 PRINTS PR01438 Universal stress protein signature 142 164 5.7E-14 T 13-10-2018 IPR006015 Universal stress protein A COP00_21965 63e462364e3c85c14185141c5e43140c 164 PRINTS PR01438 Universal stress protein signature 124 136 5.7E-14 T 13-10-2018 IPR006015 Universal stress protein A COP00_21965 63e462364e3c85c14185141c5e43140c 164 Gene3D G3DSA:3.40.50.620 3 164 1.4E-35 T 13-10-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold COP00_14880 8f3fba52609ef1016f9307e46f201223 142 Pfam PF16888 Domain of unknown function (DUF5082) 13 103 2.4E-13 T 13-10-2018 IPR031681 Protein of unknown function DUF5082 COP00_14880 8f3fba52609ef1016f9307e46f201223 142 ProDom PD085159 YWQH COILED COIL 1 138 5.0E-32 T 13-10-2018 IPR020326 Uncharacterised protein family YwqH COP00_05745 3b64208a24ca09e7f0bdf94f8df6d647 299 Pfam PF14045 YIEGIA protein 8 288 6.0E-122 T 13-10-2018 IPR025918 YIEGIA protein COP00_05745 3b64208a24ca09e7f0bdf94f8df6d647 299 ProDom PD128584 YPHB BH1976 TRANSMEMBRANE MEMBRANE SEAA 1 281 8.0E-137 T 13-10-2018 COP00_16935 a5da57d732456495deb0c871a43fb2eb 325 Gene3D G3DSA:1.20.1530.20 6 315 7.5E-58 T 13-10-2018 IPR038770 Sodium/solute symporter superfamily COP00_16935 a5da57d732456495deb0c871a43fb2eb 325 Pfam PF01758 Sodium Bile acid symporter family 43 213 9.1E-19 T 13-10-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 COP00_00250 a3fbf472d040eed109f498d8616fd30d 389 Gene3D G3DSA:3.40.640.10 58 278 2.9E-132 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 COP00_00250 a3fbf472d040eed109f498d8616fd30d 389 SUPERFAMILY SSF53383 4 379 8.34E-116 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase COP00_00250 a3fbf472d040eed109f498d8616fd30d 389 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 228 241 - T 13-10-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 COP00_00250 a3fbf472d040eed109f498d8616fd30d 389 Gene3D G3DSA:3.90.1150.10 29 375 2.9E-132 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 COP00_00250 a3fbf472d040eed109f498d8616fd30d 389 Pfam PF00155 Aminotransferase class I and II 29 375 5.1E-69 T 13-10-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 COP00_12220 6f5fb6c33ad837d8bb4f81c2415bafea 295 PIRSF PIRSF001365 1 293 1.1E-82 T 13-10-2018 IPR002220 DapA-like GO:0016829 COP00_12220 6f5fb6c33ad837d8bb4f81c2415bafea 295 Gene3D G3DSA:3.20.20.70 3 294 4.4E-95 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 COP00_12220 6f5fb6c33ad837d8bb4f81c2415bafea 295 Pfam PF00701 Dihydrodipicolinate synthetase family 6 289 4.0E-79 T 13-10-2018 IPR002220 DapA-like GO:0016829 COP00_12220 6f5fb6c33ad837d8bb4f81c2415bafea 295 SUPERFAMILY SSF51569 5 289 4.71E-88 T 13-10-2018 COP00_12220 6f5fb6c33ad837d8bb4f81c2415bafea 295 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 136 166 - T 13-10-2018 IPR020625 Schiff base-forming aldolase, active site GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 COP00_12220 6f5fb6c33ad837d8bb4f81c2415bafea 295 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 8 277 1.4E-69 T 13-10-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 COP00_12220 6f5fb6c33ad837d8bb4f81c2415bafea 295 SMART SM01130 4 292 3.7E-105 T 13-10-2018 IPR002220 DapA-like GO:0016829 COP00_12220 6f5fb6c33ad837d8bb4f81c2415bafea 295 PRINTS PR00146 Dihydrodipicolinate synthase signature 74 92 5.1E-21 T 13-10-2018 IPR002220 DapA-like GO:0016829 COP00_12220 6f5fb6c33ad837d8bb4f81c2415bafea 295 PRINTS PR00146 Dihydrodipicolinate synthase signature 131 148 5.1E-21 T 13-10-2018 IPR002220 DapA-like GO:0016829 COP00_12220 6f5fb6c33ad837d8bb4f81c2415bafea 295 PRINTS PR00146 Dihydrodipicolinate synthase signature 106 122 5.1E-21 T 13-10-2018 IPR002220 DapA-like GO:0016829 COP00_12220 6f5fb6c33ad837d8bb4f81c2415bafea 295 PRINTS PR00146 Dihydrodipicolinate synthase signature 38 59 5.1E-21 T 13-10-2018 IPR002220 DapA-like GO:0016829 COP00_01670 4af82a54cf93047aedc0384495b38ade 71 Pfam PF14035 YlzJ-like protein 3 65 1.6E-23 T 13-10-2018 IPR025619 YlzJ-like protein COP00_00335 cf15080e1f99b62e45c8863933210b50 297 Gene3D G3DSA:2.130.10.10 2 156 1.0E-7 T 13-10-2018 IPR015943 WD40/YVTN repeat-like-containing domain superfamily GO:0005515 COP00_00335 cf15080e1f99b62e45c8863933210b50 297 SUPERFAMILY SSF110296 7 284 1.06E-21 T 13-10-2018 COP00_13405 6396e16df1a92489ea99979c2fd22a67 131 SUPERFAMILY SSF102546 1 131 5.23E-45 T 13-10-2018 IPR023750 RbsD-like superfamily GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 COP00_13405 6396e16df1a92489ea99979c2fd22a67 131 Pfam PF05025 RbsD / FucU transport protein family 1 130 7.2E-47 T 13-10-2018 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 COP00_13405 6396e16df1a92489ea99979c2fd22a67 131 Hamap MF_01661 D-ribose pyranase [rbsD]. 1 131 31.402 T 13-10-2018 IPR023064 D-ribose pyranase GO:0016872 COP00_13405 6396e16df1a92489ea99979c2fd22a67 131 Gene3D G3DSA:3.40.1650.10 8 127 2.4E-36 T 13-10-2018 IPR023750 RbsD-like superfamily GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 COP00_18085 3b4c9105d2db2cacc7f0d80c31beb82f 540 TIGRFAM TIGR00795 lctP: transporter, lactate permease (LctP) family 4 535 1.7E-194 T 13-10-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 COP00_18085 3b4c9105d2db2cacc7f0d80c31beb82f 540 Pfam PF02652 L-lactate permease 14 534 2.4E-196 T 13-10-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 COP00_18005 f68969e9c92e5ebdbec3e0beb33ade98 257 Pfam PF03741 Integral membrane protein TerC family 35 212 2.2E-50 T 13-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 COP00_18005 f68969e9c92e5ebdbec3e0beb33ade98 257 TIGRFAM TIGR03716 R_switched_YkoY: integral membrane protein, YkoY family 32 241 3.4E-78 T 13-10-2018 IPR022493 Integral membrane YkoY COP00_09110 bf954c899510cec479821a4623e39b3d 128 Pfam PF04186 FxsA cytoplasmic membrane protein 7 113 2.0E-35 T 13-10-2018 IPR007313 FxsA cytoplasmic membrane protein GO:0016020 COP00_15250 e352e12fe1e549b1c0a3f9132c293590 312 SUPERFAMILY SSF103481 44 142 9.02E-8 T 13-10-2018 COP00_15250 e352e12fe1e549b1c0a3f9132c293590 312 SUPERFAMILY SSF103481 207 292 3.14E-12 T 13-10-2018 COP00_15250 e352e12fe1e549b1c0a3f9132c293590 312 Pfam PF00892 EamA-like transporter family 158 289 1.2E-15 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 COP00_15250 e352e12fe1e549b1c0a3f9132c293590 312 Pfam PF00892 EamA-like transporter family 16 141 2.0E-12 T 13-10-2018 IPR000620 EamA domain GO:0016020|GO:0016021 COP00_07770 f56b2b1430c355bf5f7c3d57f0ad36d4 95 Gene3D G3DSA:2.60.120.1270 6 94 4.2E-20 T 13-10-2018 IPR038682 YrpD-like superfamily COP00_07770 f56b2b1430c355bf5f7c3d57f0ad36d4 95 Pfam PF15493 Domain of unknown function, YrpD 19 92 8.2E-15 T 13-10-2018 IPR029143 Protein of unknown function, YrpD COP00_05055 c4ad9a66505b0bd17726b35d7a37d1e7 203 SUPERFAMILY SSF48317 5 197 1.57E-35 T 13-10-2018 IPR036938 Phosphatidic acid phosphatase type 2/haloperoxidase superfamily COP00_05055 c4ad9a66505b0bd17726b35d7a37d1e7 203 Gene3D G3DSA:1.20.144.10 109 198 1.1E-22 T 13-10-2018 COP00_05055 c4ad9a66505b0bd17726b35d7a37d1e7 203 Gene3D G3DSA:1.20.144.10 2 108 1.1E-8 T 13-10-2018 COP00_05055 c4ad9a66505b0bd17726b35d7a37d1e7 203 Pfam PF01569 PAP2 superfamily 88 194 7.6E-21 T 13-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase COP00_05055 c4ad9a66505b0bd17726b35d7a37d1e7 203 SMART SM00014 77 191 1.3E-20 T 13-10-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase COP00_10585 11e7518f99f0cd600312c462610f8f76 160 ProDom PD090911 YUEC MEMBRANE TRANSMEMBRANE 16 160 2.0E-30 T 13-10-2018 IPR020212 ESX secretion system protein YueC COP00_10585 11e7518f99f0cd600312c462610f8f76 160 Pfam PF17355 Family of unknown function (DUF5383) 36 157 8.1E-28 T 13-10-2018 IPR020212 ESX secretion system protein YueC COP00_10585 11e7518f99f0cd600312c462610f8f76 160 TIGRFAM TIGR03927 T7SS_EssA_Firm: type VII secretion protein EssA 13 155 8.9E-31 T 13-10-2018 IPR018920 ESAT-6 secretion machinery protein EssA/YueC COP00_12655 77a6f00f729137e4fc51a869f2a07a0b 456 Gene3D G3DSA:3.40.50.300 145 452 1.5E-34 T 13-10-2018 COP00_12655 77a6f00f729137e4fc51a869f2a07a0b 456 SUPERFAMILY SSF52540 164 405 3.45E-14 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_12655 77a6f00f729137e4fc51a869f2a07a0b 456 Pfam PF03796 DnaB-like helicase C terminal domain 164 422 1.0E-11 T 13-10-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 COP00_00285 36ce49dfe5f9a704338f1b263767aeb2 285 SUPERFAMILY SSF56300 56 283 6.05E-36 T 13-10-2018 COP00_00285 36ce49dfe5f9a704338f1b263767aeb2 285 Gene3D G3DSA:3.60.21.10 56 243 1.2E-23 T 13-10-2018 IPR029052 Metallo-dependent phosphatase-like COP00_00285 36ce49dfe5f9a704338f1b263767aeb2 285 Pfam PF00149 Calcineurin-like phosphoesterase 58 223 1.3E-12 T 13-10-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 COP00_01440 febd9977e11fd441ca829b2a25eb3ff0 261 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 11 254 8.1E-71 T 13-10-2018 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 COP00_01440 febd9977e11fd441ca829b2a25eb3ff0 261 Pfam PF01311 Bacterial export proteins, family 1 10 244 4.0E-74 T 13-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 COP00_01440 febd9977e11fd441ca829b2a25eb3ff0 261 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 201 220 2.6E-29 T 13-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 COP00_01440 febd9977e11fd441ca829b2a25eb3ff0 261 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 179 201 2.6E-29 T 13-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 COP00_01440 febd9977e11fd441ca829b2a25eb3ff0 261 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 18 39 2.6E-29 T 13-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 COP00_01440 febd9977e11fd441ca829b2a25eb3ff0 261 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 76 95 2.6E-29 T 13-10-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 COP00_16745 af032daba908514a2867f3730e6c35ed 61 Pfam PF00253 Ribosomal protein S14p/S29e 9 60 3.2E-25 T 13-10-2018 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 COP00_16745 af032daba908514a2867f3730e6c35ed 61 Hamap MF_01364_B 30S ribosomal protein S14 type Z [rpsZ]. 1 61 25.992 T 13-10-2018 IPR023053 Ribosomal protein S14, type Z COP00_16745 af032daba908514a2867f3730e6c35ed 61 ProSitePatterns PS00527 Ribosomal protein S14 signature. 23 45 - T 13-10-2018 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-9010553|Reactome: R-HSA-975956|Reactome: R-HSA-975957 COP00_16745 af032daba908514a2867f3730e6c35ed 61 Gene3D G3DSA:4.10.830.10 1 61 2.1E-30 T 13-10-2018 COP00_16745 af032daba908514a2867f3730e6c35ed 61 SUPERFAMILY SSF57716 3 61 9.27E-22 T 13-10-2018 COP00_06265 86d8844787303f984358a9b4bf85a2fd 212 Pfam PF07299 Elongation factor G-binding protein, N-terminal 4 86 1.9E-20 T 13-10-2018 IPR010841 Elongation factor G-binding protein, N-terminal COP00_06265 86d8844787303f984358a9b4bf85a2fd 212 Pfam PF16571 FBP C-terminal treble-clef zinc-finger 99 198 8.5E-12 T 13-10-2018 IPR032330 Elongation factor G-binding protein, C-terminal treble-clef zinc-finger COP00_05355 e8b9c6449d384e3613a84dadcaf88146 183 Gene3D G3DSA:3.40.630.30 17 180 3.1E-35 T 13-10-2018 COP00_05355 e8b9c6449d384e3613a84dadcaf88146 183 SUPERFAMILY SSF55729 17 178 1.89E-29 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase COP00_05355 e8b9c6449d384e3613a84dadcaf88146 183 Pfam PF13673 Acetyltransferase (GNAT) domain 51 159 4.4E-12 T 13-10-2018 IPR000182 GNAT domain COP00_15615 5512dd4503877819ea104ff721ccb662 245 PIRSF PIRSF006648 3 244 1.1E-21 T 13-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 COP00_15615 5512dd4503877819ea104ff721ccb662 245 Pfam PF12698 ABC-2 family transporter protein 49 235 1.7E-16 T 13-10-2018 COP00_06655 4769ee1c20108bf3f38638a96079f3b6 171 PIRSF PIRSF021435 1 171 3.7E-65 T 13-10-2018 IPR014198 Stage III sporulation protein AB COP00_06655 4769ee1c20108bf3f38638a96079f3b6 171 TIGRFAM TIGR02833 spore_III_AB: stage III sporulation protein AB 3 171 3.3E-65 T 13-10-2018 IPR014198 Stage III sporulation protein AB COP00_06655 4769ee1c20108bf3f38638a96079f3b6 171 Pfam PF09548 Stage III sporulation protein AB (spore_III_AB) 3 171 1.6E-51 T 13-10-2018 IPR014198 Stage III sporulation protein AB COP00_22105 887e3a3f4170d9a385fd5f83d0fb3ad7 75 Pfam PF14147 Sporulation protein YhaL 4 55 6.2E-28 T 13-10-2018 IPR025428 Sporulation protein YhaL COP00_11010 c348a77facd1fd7c25ac14dee57f44af 78 Pfam PF10830 Protein of unknown function (DUF2553) 6 78 3.4E-32 T 13-10-2018 IPR020140 Uncharacterised protein family YusG COP00_11010 c348a77facd1fd7c25ac14dee57f44af 78 ProDom PD058325 YUSG BH3483 7 78 2.0E-29 T 13-10-2018 IPR020140 Uncharacterised protein family YusG COP00_05285 36752e368fc2785110d40066504311aa 60 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 1 60 1.0E-26 T 13-10-2018 COP00_15540 8459ebcc417ceef1e1d1ad97be669564 228 Pfam PF00072 Response regulator receiver domain 7 115 4.4E-29 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 COP00_15540 8459ebcc417ceef1e1d1ad97be669564 228 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 225 1.7E-23 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 COP00_15540 8459ebcc417ceef1e1d1ad97be669564 228 SMART SM00448 5 115 1.1E-39 T 13-10-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 COP00_15540 8459ebcc417ceef1e1d1ad97be669564 228 Gene3D G3DSA:3.40.50.2300 2 131 2.7E-36 T 13-10-2018 COP00_15540 8459ebcc417ceef1e1d1ad97be669564 228 SUPERFAMILY SSF52172 6 179 1.77E-39 T 13-10-2018 IPR011006 CheY-like superfamily COP00_15540 8459ebcc417ceef1e1d1ad97be669564 228 Gene3D G3DSA:1.10.10.10 132 228 2.8E-33 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_15540 8459ebcc417ceef1e1d1ad97be669564 228 SMART SM00862 151 225 1.0E-28 T 13-10-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 COP00_12980 359f55b066596e5de9896cf0ad132375 97 Pfam PF17247 Family of unknown function (DUF5316) 24 96 2.4E-26 T 13-10-2018 IPR035167 Protein of unknown function DUF5316 COP00_20465 6c567bcaf68625fab3194376b4f387ac 313 Pfam PF03547 Membrane transport protein 158 306 2.1E-11 T 13-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 COP00_20465 6c567bcaf68625fab3194376b4f387ac 313 Pfam PF03547 Membrane transport protein 6 157 3.8E-14 T 13-10-2018 IPR004776 Membrane transport protein GO:0016021|GO:0055085 COP00_22770 b6981625d546d31729ee1b35d18bbeeb 191 ProDom PD032558 YJAV MED CDS GENES ARGF 1 137 2.0E-37 T 13-10-2018 COP00_14275 3da67d6784dfb130fa4d88c98e548084 391 Pfam PF07687 Peptidase dimerisation domain 186 280 4.4E-11 T 13-10-2018 IPR011650 Peptidase M20, dimerisation domain COP00_14275 3da67d6784dfb130fa4d88c98e548084 391 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 15 375 4.4E-127 T 13-10-2018 IPR017439 Amidohydrolase GO:0016787 COP00_14275 3da67d6784dfb130fa4d88c98e548084 391 SUPERFAMILY SSF55031 185 297 1.01E-29 T 13-10-2018 IPR036264 Bacterial exopeptidase dimerisation domain COP00_14275 3da67d6784dfb130fa4d88c98e548084 391 Gene3D G3DSA:3.30.70.360 182 296 4.2E-146 T 13-10-2018 COP00_14275 3da67d6784dfb130fa4d88c98e548084 391 Pfam PF01546 Peptidase family M20/M25/M40 73 382 1.9E-34 T 13-10-2018 IPR002933 Peptidase M20 GO:0016787 COP00_14275 3da67d6784dfb130fa4d88c98e548084 391 Gene3D G3DSA:3.40.630.10 15 371 4.2E-146 T 13-10-2018 COP00_14275 3da67d6784dfb130fa4d88c98e548084 391 PIRSF PIRSF005962 1 391 4.8E-136 T 13-10-2018 IPR017439 Amidohydrolase GO:0016787 COP00_14275 3da67d6784dfb130fa4d88c98e548084 391 SUPERFAMILY SSF53187 2 388 1.43E-90 T 13-10-2018 COP00_06840 86ac20c13364f79495be411a1d61aaa8 57 ProDom PD052097 RELATED ALKALIPHILY YQGW MEMBRANE TRANSMEMBRANE SPANNING 1 57 1.0E-13 T 13-10-2018 IPR024490 Protein of unknown function DUF2759 COP00_06840 86ac20c13364f79495be411a1d61aaa8 57 Pfam PF10958 Protein of unknown function (DUF2759) 6 56 6.7E-25 T 13-10-2018 IPR024490 Protein of unknown function DUF2759 COP00_11555 dc7c5221297a62361e4b15715e1e1da5 45 Pfam PF12841 YvrJ protein family 8 41 5.5E-17 T 13-10-2018 IPR024419 Protein of unknown function YvrJ COP00_00310 1204dba2d69da24ec466fb771c5469d8 172 Pfam PF04308 Ribonuclease H-like 19 172 2.5E-54 T 13-10-2018 IPR007405 Bacteriophage KVP40, Orf299 COP00_20080 d10a3f1a91243e5631d835171902174d 126 Pfam PF08445 FR47-like protein 58 112 5.0E-5 T 13-10-2018 IPR013653 FR47-like GO:0016747 COP00_20080 d10a3f1a91243e5631d835171902174d 126 SUPERFAMILY SSF55729 29 119 3.48E-9 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase COP00_20080 d10a3f1a91243e5631d835171902174d 126 Gene3D G3DSA:3.40.630.30 4 118 2.3E-8 T 13-10-2018 COP00_13330 336cc036d17fb89350e3a467d8e3a25e 320 Gene3D G3DSA:3.40.1190.20 3 315 5.3E-91 T 13-10-2018 IPR029056 Ribokinase-like COP00_13330 336cc036d17fb89350e3a467d8e3a25e 320 SUPERFAMILY SSF53613 1 310 3.43E-84 T 13-10-2018 IPR029056 Ribokinase-like COP00_13330 336cc036d17fb89350e3a467d8e3a25e 320 PRINTS PR00990 Ribokinase signature 224 235 9.3E-5 T 13-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 COP00_13330 336cc036d17fb89350e3a467d8e3a25e 320 PRINTS PR00990 Ribokinase signature 29 48 9.3E-5 T 13-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 COP00_13330 336cc036d17fb89350e3a467d8e3a25e 320 PRINTS PR00990 Ribokinase signature 185 200 9.3E-5 T 13-10-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 COP00_13330 336cc036d17fb89350e3a467d8e3a25e 320 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 254 267 - T 13-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 COP00_13330 336cc036d17fb89350e3a467d8e3a25e 320 Pfam PF00294 pfkB family carbohydrate kinase 4 302 8.4E-66 T 13-10-2018 IPR011611 Carbohydrate kinase PfkB COP00_00680 27a06febd91d92aeee3f0439b316df02 304 Hamap MF_01664 Heme A synthase [ctaA]. 1 301 30.245 T 13-10-2018 IPR023755 Heme A synthase, type 1 GO:0006784|GO:0016020|GO:0016627|GO:0055114 COP00_00680 27a06febd91d92aeee3f0439b316df02 304 Pfam PF02628 Cytochrome oxidase assembly protein 54 286 6.7E-33 T 13-10-2018 IPR003780 COX15/CtaA family GO:0006784|GO:0016021|GO:0016627|GO:0055114 Reactome: R-HSA-189451 COP00_03670 b762bf4d659b0f25e8a46fc3d241b11f 79 TIGRFAM TIGR03090 SASP_tlp: small, acid-soluble spore protein tlp 8 73 5.2E-28 T 13-10-2018 IPR017524 Small acid-soluble spore protein, thioredoxin-like COP00_03670 b762bf4d659b0f25e8a46fc3d241b11f 79 Hamap MF_01506 Small, acid-soluble spore protein Tlp [tlp]. 1 79 31.262 T 13-10-2018 IPR017524 Small acid-soluble spore protein, thioredoxin-like COP00_22710 807bae6ecb12c8e7f6acf81134f067f6 102 Pfam PF01883 Iron-sulfur cluster assembly protein 6 80 1.3E-22 T 13-10-2018 IPR002744 MIP18 family-like COP00_22710 807bae6ecb12c8e7f6acf81134f067f6 102 SUPERFAMILY SSF117916 3 100 1.01E-33 T 13-10-2018 IPR034904 Fe-S cluster assembly domain superfamily COP00_22710 807bae6ecb12c8e7f6acf81134f067f6 102 Gene3D G3DSA:3.30.300.130 1 102 3.4E-38 T 13-10-2018 IPR034904 Fe-S cluster assembly domain superfamily COP00_04090 cae0e09dd96eb8ea2e1b870d4a8ec66e 217 Pfam PF13346 ABC-2 family transporter protein 3 212 1.0E-40 T 13-10-2018 IPR025699 ABC-2 membrane transporter-like COP00_13540 28ebeafa878e143de2607e7f42efffb2 128 Gene3D G3DSA:1.10.1200.120 1 125 2.4E-40 T 13-10-2018 IPR036019 Gated mechanosensitive channel COP00_13540 28ebeafa878e143de2607e7f42efffb2 128 Pfam PF01741 Large-conductance mechanosensitive channel, MscL 1 122 3.8E-43 T 13-10-2018 IPR037673 Large-conductance mechanosensitive channel/anditomin synthesis protein L COP00_13540 28ebeafa878e143de2607e7f42efffb2 128 TIGRFAM TIGR00220 mscL: large conductance mechanosensitive channel protein 1 123 2.4E-51 T 13-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 COP00_13540 28ebeafa878e143de2607e7f42efffb2 128 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 75 83 6.7E-10 T 13-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 COP00_13540 28ebeafa878e143de2607e7f42efffb2 128 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 84 93 6.7E-10 T 13-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 COP00_13540 28ebeafa878e143de2607e7f42efffb2 128 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 4 18 6.7E-10 T 13-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 COP00_13540 28ebeafa878e143de2607e7f42efffb2 128 Hamap MF_00115 Large-conductance mechanosensitive channel [mscL]. 1 123 23.235 T 13-10-2018 IPR001185 Large-conductance mechanosensitive channel GO:0008381|GO:0016021|GO:0034220 COP00_13540 28ebeafa878e143de2607e7f42efffb2 128 SUPERFAMILY SSF81330 11 118 1.44E-32 T 13-10-2018 IPR036019 Gated mechanosensitive channel COP00_21125 ca362cf179491bf550316bfedbdc173f 56 Pfam PF14139 YpzG-like protein 13 54 8.1E-20 T 13-10-2018 IPR025413 YpzG-like protein COP00_23045 b21c9af73be708f6e92c18c3587bdd91 85 Pfam PF14069 Stage VI sporulation protein F 6 77 3.7E-27 T 13-10-2018 IPR025942 Stage VI sporulation protein F COP00_08550 aa1a6ed9c16030518de5312e3fb5b0a4 276 Pfam PF01578 Cytochrome C assembly protein 70 270 5.2E-35 T 13-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 COP00_03875 588f42dd95e6a167ed009a584afccd53 125 Pfam PF00583 Acetyltransferase (GNAT) family 7 99 9.3E-18 T 13-10-2018 IPR000182 GNAT domain COP00_03875 588f42dd95e6a167ed009a584afccd53 125 Gene3D G3DSA:3.40.630.30 1 125 9.4E-34 T 13-10-2018 COP00_03875 588f42dd95e6a167ed009a584afccd53 125 SUPERFAMILY SSF55729 4 125 1.16E-26 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase COP00_01100 0313a277597db259b03b3481f5da9b61 66 SUPERFAMILY SSF63562 1 64 1.08E-21 T 13-10-2018 IPR036161 RPB6/omega subunit-like superfamily GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 COP00_01100 0313a277597db259b03b3481f5da9b61 66 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 59 1.7E-25 T 13-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 COP00_01100 0313a277597db259b03b3481f5da9b61 66 Gene3D G3DSA:3.90.940.10 1 66 7.7E-18 T 13-10-2018 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 COP00_01100 0313a277597db259b03b3481f5da9b61 66 Pfam PF01192 RNA polymerase Rpb6 9 61 1.0E-13 T 13-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 COP00_01100 0313a277597db259b03b3481f5da9b61 66 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 62 15.008 T 13-10-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 COP00_01100 0313a277597db259b03b3481f5da9b61 66 SMART SM01409 8 61 1.8E-13 T 13-10-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708|Reactome: R-HSA-9018519 COP00_24265 a9c7595776655ab1bead40c90f57cba9 255 SUPERFAMILY SSF52540 62 231 4.18E-8 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_24265 a9c7595776655ab1bead40c90f57cba9 255 Gene3D G3DSA:3.40.50.300 68 255 2.8E-28 T 13-10-2018 COP00_10925 a5d5379e1afd8e62cff079d2bb84354b 372 SUPERFAMILY SSF54373 225 312 1.1E-12 T 13-10-2018 COP00_10925 a5d5379e1afd8e62cff079d2bb84354b 372 Pfam PF01266 FAD dependent oxidoreductase 4 352 3.4E-51 T 13-10-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 COP00_10925 a5d5379e1afd8e62cff079d2bb84354b 372 Gene3D G3DSA:3.50.50.60 5 352 1.9E-78 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily COP00_10925 a5d5379e1afd8e62cff079d2bb84354b 372 Gene3D G3DSA:3.30.9.10 88 312 1.9E-78 T 13-10-2018 COP00_10925 a5d5379e1afd8e62cff079d2bb84354b 372 SUPERFAMILY SSF51905 1 367 4.14E-43 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily COP00_03285 587f34d596eec6e410c1ffc9851ef26f 100 Pfam PF05135 Phage gp6-like head-tail connector protein 8 83 5.4E-14 T 13-10-2018 IPR021146 Phage gp6-like head-tail connector protein COP00_03285 587f34d596eec6e410c1ffc9851ef26f 100 TIGRFAM TIGR01560 put_DNA_pack: uncharacterized phage protein (possible DNA packaging) 9 89 2.3E-13 T 13-10-2018 IPR006450 Phage protein of unkonwn function COP00_16155 f53c771803c0255885d6bf0737106d9e 480 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 3 309 1.8E-88 T 13-10-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 COP00_16155 f53c771803c0255885d6bf0737106d9e 480 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 406 446 1.6E-10 T 13-10-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 COP00_16155 f53c771803c0255885d6bf0737106d9e 480 Gene3D G3DSA:3.90.105.10 412 467 1.7E-17 T 13-10-2018 COP00_16155 f53c771803c0255885d6bf0737106d9e 480 Gene3D G3DSA:3.90.1150.150 276 358 2.3E-113 T 13-10-2018 COP00_16155 f53c771803c0255885d6bf0737106d9e 480 SUPERFAMILY SSF55904 334 471 3.53E-20 T 13-10-2018 IPR036633 Orn/Lys/Arg decarboxylase, C-terminal domain superfamily GO:0003824 COP00_16155 f53c771803c0255885d6bf0737106d9e 480 Gene3D G3DSA:3.40.640.10 45 275 2.3E-113 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 COP00_16155 f53c771803c0255885d6bf0737106d9e 480 SUPERFAMILY SSF53383 3 357 4.95E-85 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase COP00_12165 f9484959b8d13a3338d7df98e11f6e44 382 Pfam PF00534 Glycosyl transferases group 1 184 349 2.2E-43 T 13-10-2018 IPR001296 Glycosyl transferase, family 1 COP00_12165 f9484959b8d13a3338d7df98e11f6e44 382 Gene3D G3DSA:3.40.50.2000 170 354 1.0E-71 T 13-10-2018 COP00_12165 f9484959b8d13a3338d7df98e11f6e44 382 Gene3D G3DSA:3.40.50.2000 26 367 1.0E-71 T 13-10-2018 COP00_12165 f9484959b8d13a3338d7df98e11f6e44 382 SUPERFAMILY SSF53756 23 368 9.87E-72 T 13-10-2018 COP00_12165 f9484959b8d13a3338d7df98e11f6e44 382 Pfam PF13477 Glycosyl transferase 4-like 8 140 9.4E-11 T 13-10-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193|Reactome: R-HSA-4549349 COP00_06210 943f28fce4b3a3fb6271d6e6f057e4eb 309 Gene3D G3DSA:3.40.50.1820 55 307 3.6E-45 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold COP00_06210 943f28fce4b3a3fb6271d6e6f057e4eb 309 Pfam PF12146 Serine aminopeptidase, S33 79 186 6.9E-11 T 13-10-2018 IPR022742 Serine aminopeptidase, S33 COP00_06210 943f28fce4b3a3fb6271d6e6f057e4eb 309 SUPERFAMILY SSF53474 10 297 2.77E-46 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold COP00_22925 8a69a0c28688fbe2dfd413825489a1b3 190 SUPERFAMILY SSF55154 5 185 1.49E-30 T 13-10-2018 IPR033469 CYTH-like domain superfamily Reactome: R-HSA-196819 COP00_22925 8a69a0c28688fbe2dfd413825489a1b3 190 SMART SM01118 4 189 1.7E-24 T 13-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 COP00_22925 8a69a0c28688fbe2dfd413825489a1b3 190 PIRSF PIRSF012526 1 190 1.8E-69 T 13-10-2018 IPR009195 Uncharacterised protein family YjbK COP00_22925 8a69a0c28688fbe2dfd413825489a1b3 190 Pfam PF01928 CYTH domain 5 183 9.8E-33 T 13-10-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 COP00_22925 8a69a0c28688fbe2dfd413825489a1b3 190 Gene3D G3DSA:2.40.320.10 1 189 1.6E-51 T 13-10-2018 COP00_23425 10298f61f5b5c04793cc651a935251ae 414 Pfam PF04860 Phage portal protein 46 369 5.9E-95 T 13-10-2018 IPR006944 Bacteriophage/Gene transfer agent portal protein COP00_23425 10298f61f5b5c04793cc651a935251ae 414 TIGRFAM TIGR01537 portal_HK97: phage portal protein, HK97 family 39 376 3.3E-90 T 13-10-2018 IPR006427 Phage portal protein, HK97 COP00_04830 47010576bb0a0260404e3d20bba02bfb 124 Pfam PF10057 Uncharacterized conserved protein (DUF2294) 7 116 1.2E-39 T 13-10-2018 IPR018745 Domain of unknown function DUF2294 COP00_09630 9bb8d29ac255a6de95e43a622678b872 107 Pfam PF14074 Protein of unknown function (DUF4257) 5 84 9.0E-33 T 13-10-2018 IPR025353 Protein of unknown function DUF4257) COP00_09630 9bb8d29ac255a6de95e43a622678b872 107 ProDom PD866859 YTVB PLASMID MEMBRANE TRANSMEMBRANE 1 107 2.0E-54 T 13-10-2018 COP00_07025 797002f97856fe31c5775b366c945116 295 Gene3D G3DSA:1.10.3720.10 57 289 1.0E-34 T 13-10-2018 IPR035906 MetI-like superfamily COP00_07025 797002f97856fe31c5775b366c945116 295 SUPERFAMILY SSF161098 17 279 6.41E-40 T 13-10-2018 IPR035906 MetI-like superfamily COP00_07025 797002f97856fe31c5775b366c945116 295 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 8 285 3.9E-80 T 13-10-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 COP00_07025 797002f97856fe31c5775b366c945116 295 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 80 292 4.0E-52 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 COP00_06020 86a12a914162e3c71f97477aa4d0d6f4 267 Pfam PF05908 Poly-gamma-glutamate hydrolase 65 252 6.0E-69 T 13-10-2018 IPR008585 Poly-gamma-glutamate hydrolase COP00_06020 86a12a914162e3c71f97477aa4d0d6f4 267 Gene3D G3DSA:3.40.630.100 59 266 2.1E-62 T 13-10-2018 IPR038128 Poly-gamma-glutamate hydrolase superfamily COP00_00740 42e3dec792eaf3e78ab6f6c41c9f6e52 79 Pfam PF14003 YlbE-like protein 14 73 5.4E-28 T 13-10-2018 IPR025613 YlbE-like protein COP00_09275 e22d87db53506332e2c13e5272acf99e 565 Pfam PF06160 Septation ring formation regulator, EzrA 4 559 2.9E-173 T 13-10-2018 IPR010379 Septation ring formation regulator EzrA GO:0000921|GO:0005940|GO:0016021 COP00_09275 e22d87db53506332e2c13e5272acf99e 565 Hamap MF_00728 Septation ring formation regulator EzrA [ezrA]. 1 563 22.568 T 13-10-2018 IPR010379 Septation ring formation regulator EzrA GO:0000921|GO:0005940|GO:0016021 COP00_23635 21e23105e65083dbf2171764de73f408 69 ProDom PD027572 XTRA PBSX RELATED YQAO ELEMENT PHAGE PHAGE-LIKE 11 64 8.0E-20 T 13-10-2018 IPR035530 Phage-like element PBSX protein XtrA COP00_23635 21e23105e65083dbf2171764de73f408 69 Pfam PF17356 Phage-like element PBSX protein XtrA 11 69 8.2E-24 T 13-10-2018 IPR035530 Phage-like element PBSX protein XtrA COP00_00945 0afd055d2930bdc787e3ab900feabcbb 150 Gene3D G3DSA:3.30.110.150 57 150 1.6E-36 T 13-10-2018 IPR038594 SepF-like superfamily COP00_00945 0afd055d2930bdc787e3ab900feabcbb 150 Hamap MF_01197 Cell division protein SepF [sepF]. 1 143 21.264 T 13-10-2018 IPR023052 Cell division protein SepF GO:0090529 COP00_00945 0afd055d2930bdc787e3ab900feabcbb 150 Pfam PF04472 Cell division protein SepF 64 135 8.0E-31 T 13-10-2018 IPR007561 Cell division protein SepF/SepF-related GO:0090529 COP00_22085 806b10a48a2664014b421bd9368b0d0d 422 Pfam PF12698 ABC-2 family transporter protein 19 393 3.1E-56 T 13-10-2018 COP00_00160 afc6e5e67a9364b8f08adbf623fd36c6 446 PIRSF PIRSF038958 1 443 1.1E-70 T 13-10-2018 IPR024923 Peptidoglycan biosynthesis protein, SpoVB-type COP00_00160 afc6e5e67a9364b8f08adbf623fd36c6 446 Pfam PF01943 Polysaccharide biosynthesis protein 5 295 8.2E-24 T 13-10-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 COP00_00160 afc6e5e67a9364b8f08adbf623fd36c6 446 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 346 436 5.3E-9 T 13-10-2018 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain COP00_01390 69a7e34257882ddbf7ed97a245013da9 145 Pfam PF03963 Flagellar hook capping protein - N-terminal region 7 78 6.5E-26 T 13-10-2018 IPR005648 Flagellar hook capping protein COP00_19210 abacefcdd65ba29f14896bc2b5428a48 130 SUPERFAMILY SSF55961 4 128 7.27E-35 T 13-10-2018 COP00_19210 abacefcdd65ba29f14896bc2b5428a48 130 Gene3D G3DSA:3.30.530.20 2 130 5.6E-36 T 13-10-2018 IPR023393 START-like domain superfamily COP00_19210 abacefcdd65ba29f14896bc2b5428a48 130 Pfam PF08327 Activator of Hsp90 ATPase homolog 1-like protein 13 127 3.4E-24 T 13-10-2018 IPR013538 Activator of Hsp90 ATPase homologue 1-like COP00_05945 a185ebba631b9d5fc8b5d6b63ea1b24c 162 Pfam PF13047 Protein of unknown function (DUF3907) 10 155 1.1E-65 T 13-10-2018 IPR025013 Protein of unknown function DUF3907 COP00_15680 e378f7a6be5407009b909ecfb37e7604 166 Pfam PF14018 Domain of unknown function (DUF4234) 17 127 2.6E-6 T 13-10-2018 IPR025328 Domain of unknown function DUF4234 COP00_23485 a0007c00169752888aee05bb8925880e 278 Pfam PF05709 Phage tail protein 25 277 1.8E-39 T 13-10-2018 IPR008841 Siphovirus-type tail component COP00_06340 64046de705b54c11ec9de1728660dde3 229 Gene3D G3DSA:3.40.630.100 24 229 4.0E-65 T 13-10-2018 IPR038128 Poly-gamma-glutamate hydrolase superfamily COP00_06340 64046de705b54c11ec9de1728660dde3 229 Pfam PF05908 Poly-gamma-glutamate hydrolase 30 219 1.1E-70 T 13-10-2018 IPR008585 Poly-gamma-glutamate hydrolase COP00_08425 f61c1e420864f16954af6fbeaf081491 113 SUPERFAMILY SSF118010 1 110 7.06E-29 T 13-10-2018 IPR036764 Cysteine protease Prp superfamily COP00_08425 f61c1e420864f16954af6fbeaf081491 113 Gene3D G3DSA:3.30.70.1490 1 112 8.1E-32 T 13-10-2018 IPR036764 Cysteine protease Prp superfamily COP00_08425 f61c1e420864f16954af6fbeaf081491 113 Pfam PF04327 Cysteine protease Prp 1 106 2.2E-23 T 13-10-2018 IPR007422 Cysteine protease Prp COP00_10210 bdd8af868be80332e734b09ffd5aa03e 371 SUPERFAMILY SSF53756 78 365 1.41E-29 T 13-10-2018 COP00_10210 bdd8af868be80332e734b09ffd5aa03e 371 Pfam PF06925 Monogalactosyldiacylglycerol (MGDG) synthase 16 179 7.6E-34 T 13-10-2018 IPR009695 Diacylglycerol glucosyltransferase, N-terminal GO:0009247|GO:0016758 COP00_10210 bdd8af868be80332e734b09ffd5aa03e 371 Gene3D G3DSA:3.40.50.2000 187 341 3.2E-16 T 13-10-2018 COP00_20880 3c1ecc5b603cc5b27d2b17c08a82db0f 263 Pfam PF01522 Polysaccharide deacetylase 61 184 1.8E-34 T 13-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 COP00_20880 3c1ecc5b603cc5b27d2b17c08a82db0f 263 SUPERFAMILY SSF88713 51 253 8.45E-65 T 13-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 COP00_20880 3c1ecc5b603cc5b27d2b17c08a82db0f 263 Gene3D G3DSA:3.20.20.370 24 261 3.1E-91 T 13-10-2018 COP00_20880 3c1ecc5b603cc5b27d2b17c08a82db0f 263 TIGRFAM TIGR02884 spore_pdaA: delta-lactam-biosynthetic de-N-acetylase 30 253 6.5E-112 T 13-10-2018 IPR014235 Peptidoglycan-N-acetylmuramic acid deacetylase PdaA COP00_10610 60a7ecb96f5ecbe5386060529e7b7847 98 Pfam PF06013 Proteins of 100 residues with WXG 5 90 3.1E-25 T 13-10-2018 IPR010310 Type VII secretion system ESAT-6-like COP00_10610 60a7ecb96f5ecbe5386060529e7b7847 98 Gene3D G3DSA:1.10.287.1060 1 98 4.0E-27 T 13-10-2018 COP00_10610 60a7ecb96f5ecbe5386060529e7b7847 98 TIGRFAM TIGR03930 WXG100_ESAT6: WXG100 family type VII secretion target 5 94 6.4E-27 T 13-10-2018 IPR010310 Type VII secretion system ESAT-6-like COP00_10610 60a7ecb96f5ecbe5386060529e7b7847 98 SUPERFAMILY SSF140453 4 97 3.01E-23 T 13-10-2018 IPR036689 ESAT-6-like superfamily COP00_23870 0de8d9b6fbab1fbc18b020fc4e9c2f2e 320 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 134 319 2.6E-28 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 COP00_23870 0de8d9b6fbab1fbc18b020fc4e9c2f2e 320 Gene3D G3DSA:1.10.3720.10 105 320 1.1E-21 T 13-10-2018 IPR035906 MetI-like superfamily COP00_23870 0de8d9b6fbab1fbc18b020fc4e9c2f2e 320 SUPERFAMILY SSF161098 111 318 1.57E-25 T 13-10-2018 IPR035906 MetI-like superfamily COP00_23870 0de8d9b6fbab1fbc18b020fc4e9c2f2e 320 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 41 93 2.6E-18 T 13-10-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain COP00_06225 1aa9a184a89725c7e2549ab1de3069b4 65 SMART SM00704 21 61 2.7E-5 T 13-10-2018 IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 COP00_06225 1aa9a184a89725c7e2549ab1de3069b4 65 Gene3D G3DSA:3.40.5.90 3 63 5.5E-14 T 13-10-2018 COP00_06225 1aa9a184a89725c7e2549ab1de3069b4 65 Pfam PF09360 Iron-binding zinc finger CDGSH type 12 56 2.0E-16 T 13-10-2018 IPR018967 Iron sulphur-containing domain, CDGSH-type GO:0043231|GO:0051537 COP00_18070 5275a5effbfe9a8014e286e55ab80060 401 SUPERFAMILY SSF103473 9 389 4.97E-62 T 13-10-2018 IPR036259 MFS transporter superfamily COP00_18070 5275a5effbfe9a8014e286e55ab80060 401 Gene3D G3DSA:1.20.1250.20 4 188 7.7E-42 T 13-10-2018 COP00_18070 5275a5effbfe9a8014e286e55ab80060 401 Pfam PF07690 Major Facilitator Superfamily 19 350 2.2E-41 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 COP00_18070 5275a5effbfe9a8014e286e55ab80060 401 Gene3D G3DSA:1.20.1250.20 195 399 4.6E-51 T 13-10-2018 COP00_21755 48ab425fd5273f10f678ca8efec79103 452 SMART SM00098 45 451 5.1E-201 T 13-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 COP00_21755 48ab425fd5273f10f678ca8efec79103 452 ProSitePatterns PS00123 Alkaline phosphatase active site. 96 104 - T 13-10-2018 IPR018299 Alkaline phosphatase, active site GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 COP00_21755 48ab425fd5273f10f678ca8efec79103 452 SUPERFAMILY SSF53649 37 449 2.78E-128 T 13-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 COP00_21755 48ab425fd5273f10f678ca8efec79103 452 Pfam PF00245 Alkaline phosphatase 44 449 1.8E-135 T 13-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 COP00_21755 48ab425fd5273f10f678ca8efec79103 452 PRINTS PR00113 Alkaline phosphatase signature 96 111 5.5E-44 T 13-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 COP00_21755 48ab425fd5273f10f678ca8efec79103 452 PRINTS PR00113 Alkaline phosphatase signature 44 64 5.5E-44 T 13-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 COP00_21755 48ab425fd5273f10f678ca8efec79103 452 PRINTS PR00113 Alkaline phosphatase signature 249 278 5.5E-44 T 13-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 COP00_21755 48ab425fd5273f10f678ca8efec79103 452 PRINTS PR00113 Alkaline phosphatase signature 183 193 5.5E-44 T 13-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 COP00_21755 48ab425fd5273f10f678ca8efec79103 452 PRINTS PR00113 Alkaline phosphatase signature 133 153 5.5E-44 T 13-10-2018 IPR001952 Alkaline phosphatase GO:0016791 KEGG: 00730+3.1.3.1|KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 COP00_21755 48ab425fd5273f10f678ca8efec79103 452 Gene3D G3DSA:3.40.720.10 48 440 8.8E-147 T 13-10-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824 COP00_21755 48ab425fd5273f10f678ca8efec79103 452 Gene3D G3DSA:1.10.60.40 325 410 8.8E-147 T 13-10-2018 COP00_08170 01ba76a9d733f5e14319c5a4ab15aa7f 153 SUPERFAMILY SSF50346 83 136 4.71E-7 T 13-10-2018 IPR011033 PRC-barrel-like superfamily COP00_08170 01ba76a9d733f5e14319c5a4ab15aa7f 153 Pfam PF05239 PRC-barrel domain 82 140 6.1E-6 T 13-10-2018 IPR027275 PRC-barrel domain COP00_08170 01ba76a9d733f5e14319c5a4ab15aa7f 153 Pfam PF05239 PRC-barrel domain 4 70 1.0E-4 T 13-10-2018 IPR027275 PRC-barrel domain COP00_12990 c6476ddcdd6034d1900f315310416935 117 Pfam PF17423 Swarming motility protein 1 116 3.1E-65 T 13-10-2018 IPR035388 Swarming motility protein SwrA COP00_12990 c6476ddcdd6034d1900f315310416935 117 ProDom PD072806 SWRA MOTILITY YVZD SWARMING MOTILITY-SWARMING 7 117 2.0E-58 T 13-10-2018 IPR035388 Swarming motility protein SwrA COP00_07475 371964dbcbb087bbd5c3580742635c59 284 Gene3D G3DSA:3.40.50.1820 1 282 9.8E-55 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold COP00_07475 371964dbcbb087bbd5c3580742635c59 284 SUPERFAMILY SSF53474 3 281 3.95E-66 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold COP00_07475 371964dbcbb087bbd5c3580742635c59 284 PRINTS PR00412 Epoxide hydrolase signature 256 278 1.1E-7 T 13-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 COP00_07475 371964dbcbb087bbd5c3580742635c59 284 PRINTS PR00412 Epoxide hydrolase signature 31 49 1.1E-7 T 13-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 COP00_07475 371964dbcbb087bbd5c3580742635c59 284 PRINTS PR00412 Epoxide hydrolase signature 111 124 1.1E-7 T 13-10-2018 IPR000639 Epoxide hydrolase-like GO:0003824 COP00_07475 371964dbcbb087bbd5c3580742635c59 284 PRINTS PR00111 Alpha/beta hydrolase fold signature 111 124 3.1E-5 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 COP00_07475 371964dbcbb087bbd5c3580742635c59 284 PRINTS PR00111 Alpha/beta hydrolase fold signature 50 65 3.1E-5 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 COP00_07475 371964dbcbb087bbd5c3580742635c59 284 Pfam PF00561 alpha/beta hydrolase fold 25 267 3.9E-26 T 13-10-2018 IPR000073 Alpha/beta hydrolase fold-1 COP00_14120 f9b7bd955ff4de6054f7750f355275f4 453 SUPERFAMILY SSF103473 15 431 1.57E-82 T 13-10-2018 IPR036259 MFS transporter superfamily COP00_14120 f9b7bd955ff4de6054f7750f355275f4 453 Gene3D G3DSA:1.20.1250.20 19 433 6.9E-79 T 13-10-2018 COP00_14120 f9b7bd955ff4de6054f7750f355275f4 453 Pfam PF07690 Major Facilitator Superfamily 301 431 2.2E-16 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 COP00_14120 f9b7bd955ff4de6054f7750f355275f4 453 Pfam PF07690 Major Facilitator Superfamily 29 299 4.6E-35 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 COP00_04230 4fbce0a0569ef17fc744704acd2125ed 546 Gene3D G3DSA:3.40.50.12780 2 435 1.6E-125 T 13-10-2018 COP00_04230 4fbce0a0569ef17fc744704acd2125ed 546 Pfam PF00501 AMP-binding enzyme 13 445 6.3E-112 T 13-10-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824 COP00_04230 4fbce0a0569ef17fc744704acd2125ed 546 Pfam PF13193 AMP-binding enzyme C-terminal domain 454 529 7.2E-20 T 13-10-2018 IPR025110 AMP-binding enzyme, C-terminal domain COP00_04230 4fbce0a0569ef17fc744704acd2125ed 546 Gene3D G3DSA:3.30.300.310 441 544 3.5E-35 T 13-10-2018 COP00_04230 4fbce0a0569ef17fc744704acd2125ed 546 SUPERFAMILY SSF56801 5 541 5.1E-162 T 13-10-2018 COP00_04230 4fbce0a0569ef17fc744704acd2125ed 546 ProSitePatterns PS00455 Putative AMP-binding domain signature. 195 206 - T 13-10-2018 IPR020845 AMP-binding, conserved site COP00_23375 77c637f53e98e51af13d8bf335bbf6c4 126 TIGRFAM TIGR01637 phage_arpU: phage transcriptional regulator, ArpU family 9 125 5.0E-30 T 13-10-2018 IPR006524 Transcription activator, ArpU family COP00_06050 b112ef4f039c33c7699939b154653b44 116 TIGRFAM TIGR02839 spore_V_AE: stage V sporulation protein AE 3 116 5.4E-55 T 13-10-2018 IPR014204 Sporulation stage V, protein AE COP00_06050 b112ef4f039c33c7699939b154653b44 116 Pfam PF03862 SpoVAC/SpoVAEB sporulation membrane protein 2 111 2.3E-41 T 13-10-2018 IPR005562 SpoVA COP00_14645 5c86a2289f6655db3a604323e0f7444f 192 ProDom PD034110 YWEA MEMBRANE YUAB TRANSMEMBRANE ORF-1 1 192 1.0E-65 T 13-10-2018 IPR034650 YuaB-like COP00_14645 5c86a2289f6655db3a604323e0f7444f 192 Gene3D G3DSA:2.60.40.3490 71 192 3.6E-43 T 13-10-2018 IPR038480 YuaB-like superfamily COP00_22580 45b1f03ef6b61ad14d12b7189e780ef9 224 SUPERFAMILY SSF53335 8 211 8.9E-35 T 13-10-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase COP00_22580 45b1f03ef6b61ad14d12b7189e780ef9 224 Gene3D G3DSA:3.40.50.150 5 168 2.6E-33 T 13-10-2018 COP00_22580 45b1f03ef6b61ad14d12b7189e780ef9 224 Pfam PF08241 Methyltransferase domain 40 132 5.2E-22 T 13-10-2018 IPR013216 Methyltransferase type 11 GO:0008168 COP00_03165 e1bb835a92c0b55fa0aa06ee810a1d05 89 Pfam PF17448 Uncharacterized protein YqaH 1 88 4.1E-46 T 13-10-2018 IPR020278 Uncharacterized protein YqaH COP00_03165 e1bb835a92c0b55fa0aa06ee810a1d05 89 ProDom PD061343 YQAH DNA SEQUENCE 1 86 5.0E-33 T 13-10-2018 IPR020278 Uncharacterized protein YqaH COP00_18850 bd1f11bab65d49a36a1aafe0551f0764 61 Gene3D G3DSA:3.50.50.60 21 33 2.9E-5 T 13-10-2018 IPR036188 FAD/NAD(P)-binding domain superfamily COP00_18850 bd1f11bab65d49a36a1aafe0551f0764 61 Gene3D G3DSA:3.30.9.10 3 16 2.9E-5 T 13-10-2018 COP00_05020 23699ac0b3859606a928f27e5d103bea 87 ProDom PD710533 YODI TRANSMEMBRANE MEMBRANE 2 48 4.0E-8 T 13-10-2018 COP00_14100 4c098a4ca5dee6536b69ae515632bb22 261 TIGRFAM TIGR02894 DNA_bind_RsfA: transcription factor, RsfA family 3 79 1.2E-43 T 13-10-2018 IPR014243 Transcription factor, RsfA COP00_21235 73ef6439b6602d8e21bda0e1ae578897 157 PIRSF PIRSF000239 1 156 9.0E-29 T 13-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 COP00_21235 73ef6439b6602d8e21bda0e1ae578897 157 SUPERFAMILY SSF52833 4 154 3.96E-53 T 13-10-2018 IPR036249 Thioredoxin-like superfamily COP00_21235 73ef6439b6602d8e21bda0e1ae578897 157 Pfam PF00578 AhpC/TSA family 5 132 3.5E-39 T 13-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 COP00_21235 73ef6439b6602d8e21bda0e1ae578897 157 Gene3D G3DSA:3.40.30.10 1 156 3.2E-52 T 13-10-2018 COP00_09800 458ea4377bc3d5d473a785b0a6dd9670 148 Pfam PF13115 YtkA-like 30 113 1.4E-15 T 13-10-2018 IPR032693 YtkA-like domain COP00_17690 0316f3893986b1fa5395fed819621b15 287 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 8 219 5.2E-55 T 13-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 COP00_17690 0316f3893986b1fa5395fed819621b15 287 Pfam PF00902 Sec-independent protein translocase protein (TatC) 10 214 1.2E-54 T 13-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 COP00_17690 0316f3893986b1fa5395fed819621b15 287 ProSitePatterns PS01218 TatC family signature. 147 166 - T 13-10-2018 IPR019820 Sec-independent periplasmic protein translocase, conserved site COP00_17690 0316f3893986b1fa5395fed819621b15 287 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 2 233 14.946 T 13-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 COP00_17690 0316f3893986b1fa5395fed819621b15 287 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 96 122 1.7E-34 T 13-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 COP00_17690 0316f3893986b1fa5395fed819621b15 287 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 78 96 1.7E-34 T 13-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 COP00_17690 0316f3893986b1fa5395fed819621b15 287 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 147 175 1.7E-34 T 13-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 COP00_17690 0316f3893986b1fa5395fed819621b15 287 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 7 34 1.7E-34 T 13-10-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 COP00_12240 6100e24afde0afaf4633bec18f36eb49 484 SUPERFAMILY SSF75005 37 483 2.28E-103 T 13-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily COP00_12240 6100e24afde0afaf4633bec18f36eb49 484 Pfam PF02435 Levansucrase/Invertase 41 480 3.3E-154 T 13-10-2018 IPR003469 Glycoside hydrolase, family 68 GO:0009758|GO:0050053 COP00_12240 6100e24afde0afaf4633bec18f36eb49 484 Gene3D G3DSA:2.115.10.20 29 478 3.2E-180 T 13-10-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain superfamily COP00_20620 c8818b6130efdc9b8ba0f1394332cf26 853 Pfam PF02687 FtsX-like permease family 286 373 5.1E-10 T 13-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 COP00_00785 8e5a38fcda7bd4ba3dea70407f65602f 57 SUPERFAMILY SSF57829 1 54 4.52E-22 T 13-10-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 COP00_00785 8e5a38fcda7bd4ba3dea70407f65602f 57 Pfam PF01783 Ribosomal L32p protein family 2 55 4.0E-27 T 13-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_00785 8e5a38fcda7bd4ba3dea70407f65602f 57 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 54 7.2E-28 T 13-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_00785 8e5a38fcda7bd4ba3dea70407f65602f 57 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 55 20.258 T 13-10-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 COP00_04540 b7b955355c8435f23835cc4329a5bf7b 216 SUPERFAMILY SSF53955 52 158 1.15E-11 T 13-10-2018 IPR023346 Lysozyme-like domain superfamily COP00_04540 b7b955355c8435f23835cc4329a5bf7b 216 Gene3D G3DSA:1.10.530.10 43 201 9.3E-51 T 13-10-2018 COP00_04540 b7b955355c8435f23835cc4329a5bf7b 216 Pfam PF13702 Lysozyme-like 47 201 2.1E-58 T 13-10-2018 COP00_17190 b0223b3ae728198879abfa3257bd6e7d 65 Gene3D G3DSA:3.40.630.30 1 61 2.4E-8 T 13-10-2018 COP00_17190 b0223b3ae728198879abfa3257bd6e7d 65 SUPERFAMILY SSF55729 1 54 5.31E-6 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase COP00_11825 a87510786ef464dfe78113d144d9c077 126 Pfam PF10711 Hypothetical protein (DUF2513) 2 105 3.3E-28 T 13-10-2018 IPR019650 Protein of unknown function DUF2513 COP00_09090 9e550727522d50c2e8a22880ea32a50c 423 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 307 326 - T 13-10-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 COP00_09090 9e550727522d50c2e8a22880ea32a50c 423 TIGRFAM TIGR00183 prok_nadp_idh: isocitrate dehydrogenase, NADP-dependent 2 422 2.2E-227 T 13-10-2018 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 COP00_09090 9e550727522d50c2e8a22880ea32a50c 423 SUPERFAMILY SSF53659 3 422 1.09E-142 T 13-10-2018 COP00_09090 9e550727522d50c2e8a22880ea32a50c 423 Gene3D G3DSA:3.40.718.10 1 423 2.5E-184 T 13-10-2018 COP00_09090 9e550727522d50c2e8a22880ea32a50c 423 SMART SM01329 21 418 5.4E-188 T 13-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 COP00_09090 9e550727522d50c2e8a22880ea32a50c 423 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 22 417 3.8E-127 T 13-10-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 COP00_17355 332f7b3c10bc74a2fc5e14501c9d6f1d 53 SUPERFAMILY SSF52833 4 52 5.82E-12 T 13-10-2018 IPR036249 Thioredoxin-like superfamily COP00_17355 332f7b3c10bc74a2fc5e14501c9d6f1d 53 Gene3D G3DSA:3.40.30.10 5 53 1.2E-21 T 13-10-2018 COP00_17355 332f7b3c10bc74a2fc5e14501c9d6f1d 53 Pfam PF03190 Protein of unknown function, DUF255 8 53 7.9E-20 T 13-10-2018 IPR004879 Domain of unknown function DUF255 COP00_20120 860aa804e1141656e5d027ee7f1f1e94 214 Gene3D G3DSA:3.40.50.720 2 214 2.4E-54 T 13-10-2018 COP00_20120 860aa804e1141656e5d027ee7f1f1e94 214 Pfam PF13460 NAD(P)H-binding 7 190 1.6E-48 T 13-10-2018 IPR016040 NAD(P)-binding domain COP00_20120 860aa804e1141656e5d027ee7f1f1e94 214 SUPERFAMILY SSF51735 1 203 3.26E-41 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily COP00_22185 74d3b86c48c6bf01782ba5347663f4a9 236 ProDom PD038378 ECSC YDBA CC1715 BH1193 ECSC-LIKE ESCC 8 230 1.0E-98 T 13-10-2018 COP00_22185 74d3b86c48c6bf01782ba5347663f4a9 236 Pfam PF12787 EcsC protein family 8 230 5.1E-72 T 13-10-2018 IPR024787 EcsC protein COP00_05915 e0d07434a031786f267f83f6aa0988a1 547 Pfam PF05140 ResB-like family 440 520 7.2E-19 T 13-10-2018 IPR007816 ResB-like domain COP00_05915 e0d07434a031786f267f83f6aa0988a1 547 Pfam PF05140 ResB-like family 64 427 9.4E-75 T 13-10-2018 IPR007816 ResB-like domain COP00_12830 4a53f8dad8ba86444bb7496246a7019a 157 SUPERFAMILY SSF55811 6 131 8.67E-29 T 13-10-2018 IPR015797 NUDIX hydrolase-like domain superfamily GO:0016787 COP00_12830 4a53f8dad8ba86444bb7496246a7019a 157 Pfam PF00293 NUDIX domain 5 124 8.9E-16 T 13-10-2018 IPR000086 NUDIX hydrolase domain GO:0016787 COP00_12830 4a53f8dad8ba86444bb7496246a7019a 157 Gene3D G3DSA:3.90.79.10 2 156 1.9E-43 T 13-10-2018 COP00_12830 4a53f8dad8ba86444bb7496246a7019a 157 PRINTS PR00502 NUDIX hydrolase family signature 43 58 1.3E-6 T 13-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 COP00_12830 4a53f8dad8ba86444bb7496246a7019a 157 PRINTS PR00502 NUDIX hydrolase family signature 29 43 1.3E-6 T 13-10-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 COP00_08095 59f0231a355888d22a6c1905562aaf53 422 ProSitePatterns PS01276 Peptidase family U32 signature. 179 197 - T 13-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 COP00_08095 59f0231a355888d22a6c1905562aaf53 422 Gene3D G3DSA:2.40.30.10 334 421 5.5E-37 T 13-10-2018 COP00_08095 59f0231a355888d22a6c1905562aaf53 422 Pfam PF16325 Peptidase family U32 C-terminal domain 338 419 1.7E-25 T 13-10-2018 IPR032525 Peptidase family U32, C-terminal COP00_08095 59f0231a355888d22a6c1905562aaf53 422 Pfam PF01136 Peptidase family U32 94 323 2.8E-87 T 13-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 COP00_10465 63cea895466943ade793d3e6e8721240 492 Pfam PF00361 Proton-conducting membrane transporter 127 416 1.8E-45 T 13-10-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 COP00_10465 63cea895466943ade793d3e6e8721240 492 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 374 400 1.5E-15 T 13-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 COP00_10465 63cea895466943ade793d3e6e8721240 492 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 132 151 1.5E-15 T 13-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 COP00_10465 63cea895466943ade793d3e6e8721240 492 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 322 341 1.5E-15 T 13-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 COP00_10465 63cea895466943ade793d3e6e8721240 492 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 162 186 1.5E-15 T 13-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 COP00_10465 63cea895466943ade793d3e6e8721240 492 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 234 258 1.5E-15 T 13-10-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 COP00_07365 db664fa8af8b9340f2ceba72401abc33 43 Pfam PF14141 YqzM-like protein 2 43 1.2E-26 T 13-10-2018 IPR025416 YqzM-like protein COP00_16520 a6483ac8932a42620644b14fb7eefdb6 154 PIRSF PIRSF010607 1 154 9.8E-67 T 13-10-2018 IPR008463 Transcriptional repressor of class III stress genes GO:0003677|GO:0006355 COP00_16520 a6483ac8932a42620644b14fb7eefdb6 154 Pfam PF05848 Firmicute transcriptional repressor of class III stress genes (CtsR) 3 151 6.7E-58 T 13-10-2018 IPR008463 Transcriptional repressor of class III stress genes GO:0003677|GO:0006355 COP00_16520 a6483ac8932a42620644b14fb7eefdb6 154 Gene3D G3DSA:1.10.10.1240 3 73 4.7E-36 T 13-10-2018 COP00_16520 a6483ac8932a42620644b14fb7eefdb6 154 Gene3D G3DSA:1.10.1200.150 74 154 2.3E-28 T 13-10-2018 COP00_17955 10111d75f7418bb10a18e3d8fecff04e 270 Pfam PF12679 ABC-2 family transporter protein 48 268 3.2E-12 T 13-10-2018 IPR032688 ABC-2 family transporter protein GO:0055085 COP00_00280 1d7f9d3dbacfe5c50f98a59845dd959a 143 Pfam PF03734 L,D-transpeptidase catalytic domain 35 141 1.7E-21 T 13-10-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 COP00_00280 1d7f9d3dbacfe5c50f98a59845dd959a 143 SUPERFAMILY SSF141523 34 142 2.88E-36 T 13-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like COP00_00280 1d7f9d3dbacfe5c50f98a59845dd959a 143 Gene3D G3DSA:2.40.440.10 28 142 3.3E-46 T 13-10-2018 IPR038063 L,D-transpeptidase catalytic domain-like COP00_18615 d6258f50286a03c740567c1271fab7bb 275 SUPERFAMILY SSF51621 5 271 3.27E-60 T 13-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 COP00_18615 d6258f50286a03c740567c1271fab7bb 275 Pfam PF13714 Phosphoenolpyruvate phosphomutase 10 247 8.8E-74 T 13-10-2018 COP00_18615 d6258f50286a03c740567c1271fab7bb 275 Gene3D G3DSA:3.20.20.60 1 245 8.7E-70 T 13-10-2018 COP00_16180 e7b136b5ce31d66dfa85d5e52f0b5219 275 Pfam PF04468 PSP1 C-terminal conserved region 62 146 6.2E-32 T 13-10-2018 IPR007557 PSP1, C-terminal COP00_09875 71c7ae308ac54a1828c15badf404b9e8 165 Gene3D G3DSA:3.40.630.30 2 162 1.1E-23 T 13-10-2018 COP00_09875 71c7ae308ac54a1828c15badf404b9e8 165 Pfam PF00583 Acetyltransferase (GNAT) family 47 140 1.5E-11 T 13-10-2018 IPR000182 GNAT domain COP00_09875 71c7ae308ac54a1828c15badf404b9e8 165 SUPERFAMILY SSF55729 6 159 1.65E-22 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase COP00_00725 e43a863764951600d493279f74953154 347 Pfam PF14504 CAP-associated N-terminal 61 200 2.4E-51 T 13-10-2018 IPR029410 CAP-associated domain COP00_00725 e43a863764951600d493279f74953154 347 SUPERFAMILY SSF55797 225 343 1.01E-22 T 13-10-2018 IPR035940 CAP superfamily COP00_00725 e43a863764951600d493279f74953154 347 Gene3D G3DSA:3.40.33.10 25 345 8.4E-108 T 13-10-2018 IPR035940 CAP superfamily COP00_00725 e43a863764951600d493279f74953154 347 Pfam PF00188 Cysteine-rich secretory protein family 231 340 1.0E-16 T 13-10-2018 IPR014044 CAP domain COP00_07550 a26782ff50fe99cfb6d5ed7aeb74771e 91 Pfam PF10676 Spore germination protein gerPA/gerPF 1 72 7.4E-21 T 13-10-2018 IPR019618 Spore germination protein GerPA/GerPF COP00_18035 f1392bf6cfcc786aad18b11c72a58e75 534 Pfam PF14266 Putative component of 'biosynthetic module' 39 524 1.3E-164 T 13-10-2018 IPR025647 Putative component of 'biosynthetic module' COP00_17950 f89e0bb0965e3d3ba13225c19dfd8db5 450 Gene3D G3DSA:3.90.1720.10 235 446 4.9E-39 T 13-10-2018 COP00_17950 f89e0bb0965e3d3ba13225c19dfd8db5 450 Pfam PF00877 NlpC/P60 family 336 446 1.0E-29 T 13-10-2018 IPR000064 Endopeptidase, NLPC/P60 domain COP00_17950 f89e0bb0965e3d3ba13225c19dfd8db5 450 SUPERFAMILY SSF54001 316 447 6.87E-31 T 13-10-2018 IPR038765 Papain-like cysteine peptidase superfamily COP00_09010 22c0091b3bd12ca65e6b8a7b44466edd 280 PIRSF PIRSF012563 1 280 1.9E-108 T 13-10-2018 IPR014199 Sporulation protein YtxC COP00_09010 22c0091b3bd12ca65e6b8a7b44466edd 280 Pfam PF08812 YtxC-like family 51 261 1.3E-56 T 13-10-2018 IPR014199 Sporulation protein YtxC COP00_09010 22c0091b3bd12ca65e6b8a7b44466edd 280 TIGRFAM TIGR02834 spo_ytxC: putative sporulation protein YtxC 3 263 4.6E-74 T 13-10-2018 IPR014199 Sporulation protein YtxC COP00_07375 81e9a8aea80573680677e69807b2030e 189 TIGRFAM TIGR02571 ComEB: ComE operon protein 2 2 151 3.5E-89 T 13-10-2018 IPR013404 Competence operon E, ComEB COP00_07375 81e9a8aea80573680677e69807b2030e 189 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 70 106 - T 13-10-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 COP00_07375 81e9a8aea80573680677e69807b2030e 189 SUPERFAMILY SSF53927 7 140 6.02E-41 T 13-10-2018 IPR016193 Cytidine deaminase-like GO:0003824 COP00_07375 81e9a8aea80573680677e69807b2030e 189 Gene3D G3DSA:3.40.140.10 2 149 4.3E-48 T 13-10-2018 COP00_07375 81e9a8aea80573680677e69807b2030e 189 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 5 116 3.0E-29 T 13-10-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain COP00_07375 81e9a8aea80573680677e69807b2030e 189 PIRSF PIRSF006019 1 151 8.3E-63 T 13-10-2018 IPR016473 Deoxycytidylate deaminase GO:0004132|GO:0006220|GO:0008270 KEGG: 00240+3.5.4.12|MetaCyc: PWY-7210|Reactome: R-HSA-499943 COP00_23460 251303f9d12982d9237d2373320475d1 122 Pfam PF11367 Protein of unknown function (DUF3168) 9 107 2.0E-6 T 13-10-2018 IPR021508 Tail completion protein COP00_09840 e788ea39b979b64695d514993d8c0a6d 52 Pfam PF07561 Domain of Unknown Function (DUF1540) 5 48 2.8E-16 T 13-10-2018 IPR011437 Domain of unknown function DUF1540 COP00_00950 d609a2864fd588872a41192c8f56f61b 89 Pfam PF02325 YGGT family 10 76 1.4E-22 T 13-10-2018 IPR003425 CCB3/YggT GO:0016020 COP00_08780 d664342390f59b4eb7af8292489a4fa0 258 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 98 118 - T 13-10-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824 COP00_08780 d664342390f59b4eb7af8292489a4fa0 258 Pfam PF00378 Enoyl-CoA hydratase/isomerase 10 257 1.3E-63 T 13-10-2018 IPR001753 Enoyl-CoA hydratase/isomerase GO:0003824 COP00_08780 d664342390f59b4eb7af8292489a4fa0 258 Gene3D G3DSA:3.90.226.10 1 258 5.8E-89 T 13-10-2018 COP00_08780 d664342390f59b4eb7af8292489a4fa0 258 SUPERFAMILY SSF52096 2 257 9.6E-81 T 13-10-2018 IPR029045 ClpP/crotonase-like domain superfamily COP00_19570 1657c56795b80ae7f25c3968db87522d 89 ProDom PD061343 YQAH DNA SEQUENCE 1 86 5.0E-36 T 13-10-2018 IPR020278 Uncharacterized protein YqaH COP00_19570 1657c56795b80ae7f25c3968db87522d 89 Pfam PF17448 Uncharacterized protein YqaH 1 88 2.9E-46 T 13-10-2018 IPR020278 Uncharacterized protein YqaH COP00_06480 558800717966f45367288772d3384938 145 Pfam PF06491 Disulphide isomerase 8 142 1.5E-62 T 13-10-2018 IPR009474 Putative bacilliredoxin, YphP/YqiW family COP00_06480 558800717966f45367288772d3384938 145 Gene3D G3DSA:3.40.30.10 25 142 2.6E-54 T 13-10-2018 COP00_06480 558800717966f45367288772d3384938 145 TIGRFAM TIGR04191 YphP_YqiW: putative bacilliredoxin, YphP/YqiW family 8 142 1.7E-63 T 13-10-2018 IPR009474 Putative bacilliredoxin, YphP/YqiW family COP00_15025 b44af8a30b5bad553b1fa7cabbd67dd2 327 Pfam PF00535 Glycosyl transferase family 2 10 172 1.4E-34 T 13-10-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 COP00_15025 b44af8a30b5bad553b1fa7cabbd67dd2 327 SUPERFAMILY SSF53448 7 185 1.34E-35 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases COP00_15025 b44af8a30b5bad553b1fa7cabbd67dd2 327 Gene3D G3DSA:3.90.550.10 1 196 1.8E-36 T 13-10-2018 IPR029044 Nucleotide-diphospho-sugar transferases COP00_10205 f2a84de386ff423913e657beb30ecf06 493 SUPERFAMILY SSF53649 5 479 4.25E-47 T 13-10-2018 IPR017850 Alkaline-phosphatase-like, core domain superfamily GO:0003824 COP00_10205 f2a84de386ff423913e657beb30ecf06 493 Pfam PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase 10 344 1.8E-14 T 13-10-2018 IPR002591 Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase GO:0003824 COP00_20175 253e6a780343098d7f2e4771243b189b 173 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 108 159 9.8E-7 T 13-10-2018 IPR019264 Domain of unknown function DUF2179 COP00_20175 253e6a780343098d7f2e4771243b189b 173 Hamap MF_01515 UPF0316 protein . 1 167 28.431 T 13-10-2018 IPR022930 Protein of unknown function UPF0316 COP00_23465 5af4ac5f41b26281caaf6df8e6250ac2 202 TIGRFAM TIGR01603 maj_tail_phi13: phage major tail protein, phi13 family 6 183 7.7E-33 T 13-10-2018 IPR006490 Phage major tail protein, phi13 family COP00_23465 5af4ac5f41b26281caaf6df8e6250ac2 202 Pfam PF04630 Phage tail tube protein 45 182 1.4E-4 T 13-10-2018 IPR006724 Phage tail tube protein 1 COP00_17750 a36be87d1900995c256ffee9975ff778 295 Gene3D G3DSA:3.30.200.20 3 92 6.9E-6 T 13-10-2018 COP00_17750 a36be87d1900995c256ffee9975ff778 295 Pfam PF01636 Phosphotransferase enzyme family 24 258 1.6E-21 T 13-10-2018 IPR002575 Aminoglycoside phosphotransferase COP00_17750 a36be87d1900995c256ffee9975ff778 295 Gene3D G3DSA:3.90.1200.10 109 294 6.4E-25 T 13-10-2018 COP00_17750 a36be87d1900995c256ffee9975ff778 295 SUPERFAMILY SSF56112 9 255 1.11E-31 T 13-10-2018 IPR011009 Protein kinase-like domain superfamily COP00_09590 e4275ac02b77af596b3b4fd5c9ab1add 501 SUPERFAMILY SSF53850 21 498 1.27E-98 T 13-10-2018 COP00_09590 e4275ac02b77af596b3b4fd5c9ab1add 501 Gene3D G3DSA:3.40.190.10 157 497 2.8E-77 T 13-10-2018 COP00_09590 e4275ac02b77af596b3b4fd5c9ab1add 501 Gene3D G3DSA:3.40.190.10 63 413 2.8E-77 T 13-10-2018 COP00_09590 e4275ac02b77af596b3b4fd5c9ab1add 501 Pfam PF13416 Bacterial extracellular solute-binding protein 61 311 1.1E-15 T 13-10-2018 IPR006059 Bacterial extracellular solute-binding protein COP00_07775 02155d3c7d8b3b2a85d401219bc83e51 252 SUPERFAMILY SSF50814 68 252 2.8E-83 T 13-10-2018 IPR012674 Calycin COP00_07775 02155d3c7d8b3b2a85d401219bc83e51 252 Pfam PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment 74 252 9.3E-84 T 13-10-2018 IPR015304 ZinT domain GO:0008270 COP00_07775 02155d3c7d8b3b2a85d401219bc83e51 252 Gene3D G3DSA:2.40.128.20 66 252 7.3E-81 T 13-10-2018 IPR012674 Calycin COP00_00730 04296c4d7f8b93af3882a6693b2c7c5d 59 Gene3D G3DSA:3.75.10.10 25 59 8.5E-8 T 13-10-2018 COP00_00730 04296c4d7f8b93af3882a6693b2c7c5d 59 SUPERFAMILY SSF55909 27 59 1.96E-8 T 13-10-2018 COP00_20945 5f1d2fca9d0ef801cf1be72d57c5cb2c 107 ProDom PD673109 PRECURSOR SIGNAL YCKD ORF4 DOMAIN 1 106 1.0E-36 T 13-10-2018 IPR024485 Protein of unknown function DUF2680 COP00_20945 5f1d2fca9d0ef801cf1be72d57c5cb2c 107 Pfam PF10925 Protein of unknown function (DUF2680) 33 89 3.7E-22 T 13-10-2018 IPR024485 Protein of unknown function DUF2680 COP00_18810 f2ac67d58b2a7e1fe1909125b17bc897 98 Pfam PF12823 Domain of unknown function (DUF3817) 7 92 4.3E-20 T 13-10-2018 IPR023845 Domain of unknown function DUF3817, transmembrane COP00_18810 f2ac67d58b2a7e1fe1909125b17bc897 98 TIGRFAM TIGR03954 integ_memb_HG: integral membrane protein 10 92 6.9E-26 T 13-10-2018 IPR023845 Domain of unknown function DUF3817, transmembrane COP00_24055 e868fc3d67484ce4e76f930c1cb23676 255 SUPERFAMILY SSF103473 11 243 3.4E-6 T 13-10-2018 IPR036259 MFS transporter superfamily COP00_24055 e868fc3d67484ce4e76f930c1cb23676 255 Pfam PF03741 Integral membrane protein TerC family 16 203 7.0E-52 T 13-10-2018 IPR005496 Integral membrane protein TerC GO:0016021 COP00_24055 e868fc3d67484ce4e76f930c1cb23676 255 TIGRFAM TIGR03716 R_switched_YkoY: integral membrane protein, YkoY family 12 244 2.0E-93 T 13-10-2018 IPR022493 Integral membrane YkoY COP00_19685 311aa298011898abc4f2ef999ce2d5fb 569 Gene3D G3DSA:3.40.50.300 41 256 1.8E-19 T 13-10-2018 COP00_19685 311aa298011898abc4f2ef999ce2d5fb 569 Pfam PF03354 Phage Terminase 82 550 4.0E-101 T 13-10-2018 IPR005021 Terminase large subunit, Lambdalikevirus-type COP00_22680 1fb2f79d1209badb58b85809b773959c 280 Pfam PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 9 215 1.0E-60 T 13-10-2018 IPR003740 Uncharacterised membrane protein YitT COP00_22680 1fb2f79d1209badb58b85809b773959c 280 Gene3D G3DSA:3.30.70.120 193 268 5.0E-21 T 13-10-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal COP00_22680 1fb2f79d1209badb58b85809b773959c 280 PIRSF PIRSF006483 1 280 1.3E-97 T 13-10-2018 IPR003740 Uncharacterised membrane protein YitT COP00_22680 1fb2f79d1209badb58b85809b773959c 280 Pfam PF10035 Uncharacterized protein conserved in bacteria (DUF2179) 221 275 5.7E-19 T 13-10-2018 IPR019264 Domain of unknown function DUF2179 COP00_17285 27baf6a78ca1017ed985e07e0ec21adf 355 Gene3D G3DSA:3.10.450.540 253 355 1.2E-11 T 13-10-2018 COP00_17285 27baf6a78ca1017ed985e07e0ec21adf 355 Pfam PF12642 Conjugative transposon protein TcpC 100 350 4.5E-46 T 13-10-2018 IPR024735 Conjugative transposon protein TcpC COP00_15550 136d3d2e471277dc674b4b4e669a30c9 204 Pfam PF10067 Predicted membrane protein (DUF2306) 54 198 9.3E-38 T 13-10-2018 IPR018750 Protein of unknown function DUF2306, membrane COP00_10295 541c68c6fce5accacff898a991cc910f 84 Pfam PF11458 Membrane-integrating protein Mistic 1 83 6.3E-35 T 13-10-2018 IPR021078 Membrane-integrating protein Mistic COP00_10295 541c68c6fce5accacff898a991cc910f 84 Gene3D G3DSA:1.10.220.90 1 75 3.1E-32 T 13-10-2018 IPR038193 Mistic superfamily COP00_18000 cc5ad123ac1444b9c904fefab4ff7b23 192 Pfam PF02342 TerD domain 1 188 6.9E-85 T 13-10-2018 IPR003325 TerD domain COP00_18000 cc5ad123ac1444b9c904fefab4ff7b23 192 Gene3D G3DSA:2.60.60.30 19 187 7.2E-72 T 13-10-2018 COP00_03255 3c05ddfbec3893dc7bb26761d9ecbdcb 569 Gene3D G3DSA:3.40.50.300 44 256 1.5E-20 T 13-10-2018 COP00_03255 3c05ddfbec3893dc7bb26761d9ecbdcb 569 Pfam PF03354 Phage Terminase 81 550 1.8E-102 T 13-10-2018 IPR005021 Terminase large subunit, Lambdalikevirus-type COP00_09745 645e282fd85d671d56b714a2bf31f509 80 SUPERFAMILY SSF88697 1 80 6.46E-31 T 13-10-2018 IPR015947 PUA-like superfamily COP00_09745 645e282fd85d671d56b714a2bf31f509 80 Pfam PF10763 Protein of unknown function (DUF2584) 1 80 1.3E-37 T 13-10-2018 IPR019699 Protein of unknown function DUF2584 COP00_09745 645e282fd85d671d56b714a2bf31f509 80 Gene3D G3DSA:2.40.240.20 1 77 1.5E-32 T 13-10-2018 COP00_12115 1411533770db912355810de75cce3368 381 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 16 374 1.5E-98 T 13-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase COP00_12115 1411533770db912355810de75cce3368 381 SUPERFAMILY SSF53383 12 376 2.92E-102 T 13-10-2018 IPR015424 Pyridoxal phosphate-dependent transferase COP00_12115 1411533770db912355810de75cce3368 381 PIRSF PIRSF000390 3 379 6.4E-110 T 13-10-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase COP00_12115 1411533770db912355810de75cce3368 381 Gene3D G3DSA:3.40.640.10 1 251 1.5E-87 T 13-10-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major domain GO:0003824 COP00_12115 1411533770db912355810de75cce3368 381 Gene3D G3DSA:3.90.1150.10 253 381 4.3E-39 T 13-10-2018 IPR015422 Pyridoxal phosphate-dependent transferase domain 1 GO:0003824 COP00_13120 226f1c5b5517a8684b79fd6019257db7 94 Pfam PF10719 Late competence development protein ComFB 4 84 1.1E-16 T 13-10-2018 IPR019657 Late competence development protein ComFB COP00_01525 a29966fcebfec327e045ae1309ca956b 267 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 220 246 - T 13-10-2018 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7817 COP00_01525 a29966fcebfec327e045ae1309ca956b 267 Pfam PF01148 Cytidylyltransferase family 2 262 1.6E-69 T 13-10-2018 COP00_02710 72f7d3b7f9101b12f43597574664f307 334 Gene3D G3DSA:1.10.443.10 105 284 5.8E-7 T 13-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 COP00_02710 72f7d3b7f9101b12f43597574664f307 334 SUPERFAMILY SSF56349 37 244 5.59E-10 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 COP00_07760 7f69848aab1e3f422e85935e46dbcb38 129 Pfam PF14552 Tautomerase enzyme 38 118 4.5E-33 T 13-10-2018 IPR037479 Tautomerase, MSAD family COP00_07760 7f69848aab1e3f422e85935e46dbcb38 129 SUPERFAMILY SSF55331 2 128 3.23E-42 T 13-10-2018 IPR014347 Tautomerase/MIF superfamily COP00_07760 7f69848aab1e3f422e85935e46dbcb38 129 Gene3D G3DSA:3.30.429.10 1 129 3.1E-51 T 13-10-2018 IPR014347 Tautomerase/MIF superfamily COP00_15380 db00293c4e6810f6a810cd1c95435841 75 Pfam PF04023 FeoA domain 1 73 7.0E-12 T 13-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 COP00_15380 db00293c4e6810f6a810cd1c95435841 75 SUPERFAMILY SSF50037 5 74 1.22E-13 T 13-10-2018 IPR008988 Transcriptional repressor, C-terminal COP00_15380 db00293c4e6810f6a810cd1c95435841 75 SMART SM00899 1 74 8.7E-14 T 13-10-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 COP00_15380 db00293c4e6810f6a810cd1c95435841 75 Gene3D G3DSA:2.30.30.90 1 75 2.1E-15 T 13-10-2018 IPR038157 Ferrous iron transporter, core domain COP00_17510 a608e17a869fa2cda97684a9c5d05ac8 179 PRINTS PR01754 Streptothricin acetyltransferase signature 143 159 7.6E-18 T 13-10-2018 IPR008125 Streptothricin acetyltransferase COP00_17510 a608e17a869fa2cda97684a9c5d05ac8 179 PRINTS PR01754 Streptothricin acetyltransferase signature 166 179 7.6E-18 T 13-10-2018 IPR008125 Streptothricin acetyltransferase COP00_17510 a608e17a869fa2cda97684a9c5d05ac8 179 PRINTS PR01754 Streptothricin acetyltransferase signature 122 137 7.6E-18 T 13-10-2018 IPR008125 Streptothricin acetyltransferase COP00_17510 a608e17a869fa2cda97684a9c5d05ac8 179 PRINTS PR01754 Streptothricin acetyltransferase signature 98 113 7.6E-18 T 13-10-2018 IPR008125 Streptothricin acetyltransferase COP00_17510 a608e17a869fa2cda97684a9c5d05ac8 179 Gene3D G3DSA:3.40.630.30 1 179 2.1E-49 T 13-10-2018 COP00_17510 a608e17a869fa2cda97684a9c5d05ac8 179 SUPERFAMILY SSF55729 1 161 2.33E-30 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase COP00_17510 a608e17a869fa2cda97684a9c5d05ac8 179 Pfam PF00583 Acetyltransferase (GNAT) family 53 151 1.4E-20 T 13-10-2018 IPR000182 GNAT domain COP00_22215 bebc9bafca4b4b2c0fb462d7aa00f48c 311 SUPERFAMILY SSF53800 3 307 1.8E-89 T 13-10-2018 COP00_22215 bebc9bafca4b4b2c0fb462d7aa00f48c 311 ProSitePatterns PS00534 Ferrochelatase signature. 177 195 - T 13-10-2018 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 COP00_22215 bebc9bafca4b4b2c0fb462d7aa00f48c 311 Gene3D G3DSA:3.40.50.1400 8 303 1.8E-107 T 13-10-2018 COP00_22215 bebc9bafca4b4b2c0fb462d7aa00f48c 311 Hamap MF_00323 Ferrochelatase [hemH]. 4 307 32.865 T 13-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 COP00_22215 bebc9bafca4b4b2c0fb462d7aa00f48c 311 TIGRFAM TIGR00109 hemH: ferrochelatase 3 307 1.0E-106 T 13-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 COP00_22215 bebc9bafca4b4b2c0fb462d7aa00f48c 311 Gene3D G3DSA:3.40.50.1400 147 288 1.8E-107 T 13-10-2018 COP00_22215 bebc9bafca4b4b2c0fb462d7aa00f48c 311 Pfam PF00762 Ferrochelatase 5 306 8.3E-86 T 13-10-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 COP00_00655 720e0e570ac529118ff3cc29d4136b88 158 ProDom PD094668 YLAL SIMILAR MW0994 BH2628 SE0810 SA0960 3 157 3.0E-55 T 13-10-2018 IPR020229 Uncharacterised protein YlaL COP00_10385 90544a99033d538b8c820bc2bbd99313 135 Pfam PF04134 Protein of unknown function, DUF393 9 118 3.2E-37 T 13-10-2018 IPR007263 Protein of unknown function DUF393 COP00_08100 4d4fb9b1842a6fadcde1ba11049c29de 309 Pfam PF01136 Peptidase family U32 75 306 1.9E-70 T 13-10-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 COP00_03980 dc1aa9a34fd03b3d74ae4c94031fe998 129 SMART SM00422 3 72 5.5E-21 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 COP00_03980 dc1aa9a34fd03b3d74ae4c94031fe998 129 Gene3D G3DSA:1.10.1660.10 1 129 3.0E-34 T 13-10-2018 COP00_03980 dc1aa9a34fd03b3d74ae4c94031fe998 129 Pfam PF13411 MerR HTH family regulatory protein 3 70 8.8E-20 T 13-10-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 COP00_03980 dc1aa9a34fd03b3d74ae4c94031fe998 129 SUPERFAMILY SSF46955 3 117 4.76E-31 T 13-10-2018 IPR009061 Putative DNA-binding domain superfamily COP00_01385 62fbf67c743fe9aff20df176412fbd12 458 Pfam PF02120 Flagellar hook-length control protein FliK 336 412 1.3E-17 T 13-10-2018 IPR021136 Flagellar hook-length control protein-like, C-terminal COP00_01385 62fbf67c743fe9aff20df176412fbd12 458 Gene3D G3DSA:3.30.750.140 312 435 1.5E-10 T 13-10-2018 IPR038610 FliK-like, C-terminal domain superfamily COP00_02625 2b1760f51d0299d2f1ebd6b92e8d15fd 68 SUPERFAMILY SSF47413 2 67 1.39E-8 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 COP00_02625 2b1760f51d0299d2f1ebd6b92e8d15fd 68 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 5 67 1.5E-15 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 COP00_02625 2b1760f51d0299d2f1ebd6b92e8d15fd 68 Gene3D G3DSA:1.10.260.40 1 68 1.5E-5 T 13-10-2018 COP00_18440 04817ab2719cb24da89373cc68a197eb 86 Pfam PF13780 Domain of unknown function (DUF4176) 10 82 1.2E-27 T 13-10-2018 IPR025233 Protein of unknown function DUF4176 COP00_10795 96c2ffe390b225e0bb98fb1cbc312a32 146 Pfam PF01934 Protein of unknown function DUF86 26 126 6.1E-20 T 13-10-2018 IPR008201 Protein of unknown function DUF86 COP00_10795 96c2ffe390b225e0bb98fb1cbc312a32 146 Gene3D G3DSA:1.20.120.580 1 144 3.4E-57 T 13-10-2018 IPR037038 Bsu32300-like superfamily COP00_22130 787042c9416e2ad30b546ea0d2fa1487 171 Pfam PF11667 Putative zincin peptidase 59 156 2.7E-19 T 13-10-2018 IPR021683 Putative zincin peptidase COP00_17185 1245b15854dde71b7c5a88aa15508509 460 ProSitePatterns PS00218 Amino acid permeases signature. 39 69 - T 13-10-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 COP00_17185 1245b15854dde71b7c5a88aa15508509 460 Pfam PF00324 Amino acid permease 14 442 2.0E-105 T 13-10-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0016020|GO:0055085 COP00_17185 1245b15854dde71b7c5a88aa15508509 460 Gene3D G3DSA:1.20.1740.10 4 457 1.7E-56 T 13-10-2018 COP00_17185 1245b15854dde71b7c5a88aa15508509 460 PIRSF PIRSF006060 2 459 1.6E-63 T 13-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 COP00_05830 567be533482d368f08529f30c8cfc19c 214 Pfam PF02517 CAAX protease self-immunity 99 180 4.3E-11 T 13-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 COP00_20845 b5843bf1afd43bb646a37f328dfa596f 274 Pfam PF03631 Virulence factor BrkB 14 261 4.1E-67 T 13-10-2018 IPR017039 Virulence factor BrkB COP00_20845 b5843bf1afd43bb646a37f328dfa596f 274 PIRSF PIRSF035875 1 274 2.0E-76 T 13-10-2018 IPR017039 Virulence factor BrkB COP00_20845 b5843bf1afd43bb646a37f328dfa596f 274 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 2 260 1.0E-70 T 13-10-2018 IPR017039 Virulence factor BrkB COP00_09500 7a03cb50125991f9902518c421c4726b 542 Pfam PF01943 Polysaccharide biosynthesis protein 5 319 1.5E-66 T 13-10-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 COP00_09500 7a03cb50125991f9902518c421c4726b 542 Pfam PF14667 Polysaccharide biosynthesis C-terminal domain 375 524 8.8E-29 T 13-10-2018 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain COP00_09500 7a03cb50125991f9902518c421c4726b 542 PIRSF PIRSF038958 1 541 2.2E-153 T 13-10-2018 IPR024923 Peptidoglycan biosynthesis protein, SpoVB-type COP00_08070 52785f315cd2bfaa1932bc7de0d66c0e 67 Pfam PF10750 Protein of unknown function (DUF2536) 1 66 2.7E-33 T 13-10-2018 IPR019686 Protein of unknown function DUF2536 COP00_04245 1b2ab72bfaf23bc1df5ba135d73afe6e 118 SUPERFAMILY SSF46785 20 113 7.45E-27 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_04245 1b2ab72bfaf23bc1df5ba135d73afe6e 118 Gene3D G3DSA:1.10.10.10 16 117 7.9E-29 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_04245 1b2ab72bfaf23bc1df5ba135d73afe6e 118 Pfam PF01638 HxlR-like helix-turn-helix 27 113 2.6E-26 T 13-10-2018 IPR002577 Helix-turn-helix, HxlR type COP00_23545 9b17e8875c3f911f3e8c53bd9f39ad49 51 TIGRFAM TIGR01592 holin_SPP1: holin, SPP1 family 1 47 4.0E-14 T 13-10-2018 IPR006479 Holin COP00_23545 9b17e8875c3f911f3e8c53bd9f39ad49 51 Pfam PF04688 SPP1 phage holin 1 47 1.2E-12 T 13-10-2018 IPR006479 Holin COP00_23545 9b17e8875c3f911f3e8c53bd9f39ad49 51 ProDom PD008023 HOLIN TRANSMEMBRANE MEMBRANE PROPHAGE FAMILY BHLB SPP1 5'REGION HOLIN ORF050 1 47 2.0E-17 T 13-10-2018 IPR006479 Holin COP00_01160 cb2cd6637328f7beb4cb7fba31ea742e 26 Pfam PF08183 Stage V sporulation protein family 1 25 4.0E-18 T 13-10-2018 IPR012609 Sporulation stage V, protein M COP00_07665 9db3d96cc4d9065189e32516c34998ef 61 Pfam PF00581 Rhodanese-like domain 33 60 2.2E-4 T 13-10-2018 IPR001763 Rhodanese-like domain COP00_07665 9db3d96cc4d9065189e32516c34998ef 61 Gene3D G3DSA:3.40.250.10 23 61 9.4E-7 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily COP00_07665 9db3d96cc4d9065189e32516c34998ef 61 SUPERFAMILY SSF52821 21 61 1.44E-7 T 13-10-2018 IPR036873 Rhodanese-like domain superfamily COP00_07665 9db3d96cc4d9065189e32516c34998ef 61 ProSitePatterns PS00380 Rhodanese signature 1. 49 60 - T 13-10-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350|MetaCyc: PWY-7927|Reactome: R-HSA-1614558 COP00_17095 01faa0b500ce756f0ff34406c1df842a 333 SUPERFAMILY SSF56601 4 332 5.64E-78 T 13-10-2018 IPR012338 Beta-lactamase/transpeptidase-like COP00_17095 01faa0b500ce756f0ff34406c1df842a 333 Pfam PF00144 Beta-lactamase 38 317 4.6E-30 T 13-10-2018 IPR001466 Beta-lactamase-related COP00_17095 01faa0b500ce756f0ff34406c1df842a 333 Gene3D G3DSA:3.40.710.10 2 326 4.2E-72 T 13-10-2018 COP00_18625 744adce98e248301392ec93971a00648 94 SUPERFAMILY SSF54909 1 92 2.46E-30 T 13-10-2018 IPR011008 Dimeric alpha-beta barrel COP00_18625 744adce98e248301392ec93971a00648 94 Gene3D G3DSA:3.30.70.100 1 93 4.0E-30 T 13-10-2018 COP00_18625 744adce98e248301392ec93971a00648 94 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 76 3.8E-22 T 13-10-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain COP00_22625 39ce4290849f40035b58ec5861728d08 184 Pfam PF13523 Acetyltransferase (GNAT) domain 11 155 6.9E-50 T 13-10-2018 COP00_22625 39ce4290849f40035b58ec5861728d08 184 Gene3D G3DSA:3.40.630.30 1 181 1.6E-56 T 13-10-2018 COP00_22625 39ce4290849f40035b58ec5861728d08 184 SUPERFAMILY SSF55729 2 168 4.25E-52 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase COP00_22625 39ce4290849f40035b58ec5861728d08 184 SMART SM01006 8 55 1.6E-15 T 13-10-2018 IPR019432 Siderophore biosynthesis protein, conserved domain COP00_04915 9752064c467ec0b9efc58ec101ecadb5 637 Pfam PF11775 Cobalamin biosynthesis protein CobT VWA domain 431 559 6.0E-8 T 13-10-2018 IPR025861 Cobalamin biosynthesis protein CobT VWA domain KEGG: 00860+6.6.1.2|MetaCyc: PWY-7376 COP00_04915 9752064c467ec0b9efc58ec101ecadb5 637 SMART SM00327 441 632 3.7E-19 T 13-10-2018 IPR002035 von Willebrand factor, type A COP00_04915 9752064c467ec0b9efc58ec101ecadb5 637 Gene3D G3DSA:3.40.50.410 442 630 4.1E-13 T 13-10-2018 IPR036465 von Willebrand factor A-like domain superfamily COP00_04915 9752064c467ec0b9efc58ec101ecadb5 637 SUPERFAMILY SSF53300 445 630 5.64E-18 T 13-10-2018 IPR036465 von Willebrand factor A-like domain superfamily COP00_07650 d1dec36635630db84985c5c076bc2cdf 160 Pfam PF13686 DsrE/DsrF/DrsH-like family 5 159 1.0E-68 T 13-10-2018 IPR032836 DsrE2-like family COP00_07650 d1dec36635630db84985c5c076bc2cdf 160 SUPERFAMILY SSF75169 7 158 2.06E-23 T 13-10-2018 IPR027396 DsrEFH-like COP00_07650 d1dec36635630db84985c5c076bc2cdf 160 Gene3D G3DSA:3.40.1260.10 2 160 4.9E-69 T 13-10-2018 IPR027396 DsrEFH-like COP00_19510 56c3ef9efe7480c82e3eb1b11745d95b 59 ProDom PD053380 YDIK LIPOPROTEIN TRANSMEMBRANE MEMBRANE PRECURSOR PALMITATE SIGNAL 1 59 5.0E-23 T 13-10-2018 COP00_19510 56c3ef9efe7480c82e3eb1b11745d95b 59 Pfam PF14146 Domain of unknown function (DUF4305) 17 52 5.4E-14 T 13-10-2018 IPR025426 Protein of unknown function DUF4305 COP00_03335 c62f7f252934689c5e1f8562136f8dad 446 Pfam PF10651 Domain of unknown function (DUF2479) 5 146 6.5E-30 T 13-10-2018 IPR018913 Domain of unknown function DUF2479 COP00_23500 c62f7f252934689c5e1f8562136f8dad 446 Pfam PF10651 Domain of unknown function (DUF2479) 5 146 6.5E-30 T 13-10-2018 IPR018913 Domain of unknown function DUF2479 COP00_19765 c62f7f252934689c5e1f8562136f8dad 446 Pfam PF10651 Domain of unknown function (DUF2479) 5 146 6.5E-30 T 13-10-2018 IPR018913 Domain of unknown function DUF2479 COP00_00355 d1849a7811aa3054ad59b7a82fd16a09 81 ProDom PD059670 UPF0180 YKUS BA1413/GBAA1413/BAS1304 YKUS-LIKE BT9727_1277 BCE1513 GK1051 BH2667 ABC2430 BCE33L1278 4 48 6.0E-17 T 13-10-2018 IPR005370 Uncharacterised protein family UPF0180 COP00_00355 d1849a7811aa3054ad59b7a82fd16a09 81 Pfam PF03698 Uncharacterised protein family (UPF0180) 3 79 2.0E-29 T 13-10-2018 IPR005370 Uncharacterised protein family UPF0180 COP00_00355 d1849a7811aa3054ad59b7a82fd16a09 81 Hamap MF_00506 UPF0180 protein . 2 80 26.695 T 13-10-2018 IPR005370 Uncharacterised protein family UPF0180 COP00_11360 8661082446863b54fbb45bef63a00704 204 Pfam PF03458 UPF0126 domain 92 161 1.1E-18 T 13-10-2018 IPR005115 Uncharacterised domain UPF0126 COP00_11360 8661082446863b54fbb45bef63a00704 204 Pfam PF03458 UPF0126 domain 6 78 8.0E-18 T 13-10-2018 IPR005115 Uncharacterised domain UPF0126 COP00_17745 30beb209a59e9aad2477f3bf69ce0af5 386 Pfam PF16226 Domain of unknown function (DUF4885) 55 379 1.8E-169 T 13-10-2018 IPR032617 Protein of unknown function DUF4885 COP00_11060 d0ce4f6d8f2057505b42925c04b118e0 248 Pfam PF06276 Ferric iron reductase FhuF-like transporter 73 213 3.3E-9 T 13-10-2018 IPR022770 Ferric iron reductase FhuF domain COP00_11060 d0ce4f6d8f2057505b42925c04b118e0 248 Pfam PF11575 FhuF 2Fe-2S C-terminal domain 219 240 2.3E-4 T 13-10-2018 IPR024726 Ferric iron reductase, C-terminal GO:0051537 COP00_15205 206db134e2aad8c61df63c23bdcba383 364 SUPERFAMILY SSF48208 34 337 8.16E-45 T 13-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 COP00_15205 206db134e2aad8c61df63c23bdcba383 364 Gene3D G3DSA:1.50.10.10 17 359 6.5E-100 T 13-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 COP00_06695 64eb1b0104506f5516cc4bdacddbd9d0 128 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 2 128 3.0E-64 T 13-10-2018 COP00_01185 188e56b314402bb0e03039725cd60f21 300 TIGRFAM TIGR00718 sda_alpha: L-serine dehydratase, iron-sulfur-dependent, alpha subunit 1 299 1.6E-156 T 13-10-2018 IPR004642 Serine dehydratase, alpha subunit GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 COP00_01185 188e56b314402bb0e03039725cd60f21 300 Pfam PF03313 Serine dehydratase alpha chain 14 274 3.3E-78 T 13-10-2018 IPR005130 Serine dehydratase-like, alpha subunit COP00_20010 f8809a04fe6ad2867bacb686fa631843 167 Pfam PF10027 Predicted integral membrane protein (DUF2269) 12 159 2.5E-8 T 13-10-2018 IPR018729 Protein of unknown function DUF2269, transmembrane COP00_18645 d78d0c988405dec078686aaa77084627 463 PIRSF PIRSF006060 1 454 1.9E-88 T 13-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 COP00_18645 d78d0c988405dec078686aaa77084627 463 Gene3D G3DSA:1.20.1740.10 4 461 6.4E-75 T 13-10-2018 COP00_18645 d78d0c988405dec078686aaa77084627 463 Pfam PF13520 Amino acid permease 12 428 1.0E-43 T 13-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 COP00_03465 0924b735acb5db7937faa048b81cbf59 32 TIGRFAM TIGR01732 tiny_TM_bacill: conserved hypothetical protein 3 27 3.2E-14 T 13-10-2018 IPR010070 Sporulation protein YjcZ-like COP00_03465 0924b735acb5db7937faa048b81cbf59 32 Pfam PF09680 Protein of unknown function (Tiny_TM_bacill) 4 27 4.8E-13 T 13-10-2018 IPR010070 Sporulation protein YjcZ-like COP00_07935 aec925a4472d0a9b4c4806e3c9e098c9 400 Pfam PF07690 Major Facilitator Superfamily 22 356 1.5E-35 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 COP00_07935 aec925a4472d0a9b4c4806e3c9e098c9 400 SUPERFAMILY SSF103473 7 390 5.1E-56 T 13-10-2018 IPR036259 MFS transporter superfamily COP00_07935 aec925a4472d0a9b4c4806e3c9e098c9 400 Gene3D G3DSA:1.20.1250.20 11 388 4.5E-49 T 13-10-2018 COP00_16150 a93e253bfd8f8c79dc8fc88ad11f7337 376 Pfam PF05816 Toxic anion resistance protein (TelA) 38 361 3.2E-118 T 13-10-2018 IPR008863 Toxic anion resistance COP00_16150 a93e253bfd8f8c79dc8fc88ad11f7337 376 PIRSF PIRSF026508 3 373 5.0E-118 T 13-10-2018 IPR008863 Toxic anion resistance COP00_06790 b62e067d4df75a9aeecdf0c4766a1e02 115 ProDom PD073895 COMPETENCE COMGE LATE MACHINERY MEMBRANE OPERON DNA THE METHYLATION PART 1 115 1.0E-34 T 13-10-2018 IPR020488 Competence operon G, ComGE COP00_04410 f58a03d576c58586d0cc64900daa33a7 368 Pfam PF03845 Spore germination protein 7 327 1.7E-99 T 13-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 COP00_04410 f58a03d576c58586d0cc64900daa33a7 368 TIGRFAM TIGR00912 2A0309: spore germination protein (amino acid permease) 6 361 9.5E-79 T 13-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 COP00_03385 17748db12c500e2347605b25e73f3e6d 171 Gene3D G3DSA:1.20.1260.50 2 163 1.5E-6 T 13-10-2018 COP00_07065 5b7d8b3552a25e6c52980e11d189a8dc 101 SMART SM00257 48 96 4.0E-5 T 13-10-2018 IPR018392 LysM domain COP00_07065 5b7d8b3552a25e6c52980e11d189a8dc 101 Gene3D G3DSA:3.10.350.10 47 96 3.8E-6 T 13-10-2018 IPR036779 LysM domain superfamily COP00_07065 5b7d8b3552a25e6c52980e11d189a8dc 101 ProDom PD067165 YQFZ MEMBRANE WALL BH1402 TRANSMEMBRANE OB1935 CELL 1 98 9.0E-31 T 13-10-2018 IPR020506 Uncharacterised protein family YqfZ COP00_03820 590a4d157425cee4b42f4d746048a54a 784 SUPERFAMILY SSF81442 294 769 9.55E-81 T 13-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 COP00_03820 590a4d157425cee4b42f4d746048a54a 784 Gene3D G3DSA:1.20.210.10 14 79 1.2E-19 T 13-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 COP00_03820 590a4d157425cee4b42f4d746048a54a 784 Gene3D G3DSA:1.20.210.10 240 774 8.1E-194 T 13-10-2018 IPR036927 Cytochrome c oxidase-like, subunit I superfamily GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 COP00_03820 590a4d157425cee4b42f4d746048a54a 784 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 303 744 1.5E-63 T 13-10-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 COP00_21735 7a5f2516f661396a197417e7e37901aa 106 Pfam PF13028 Protein of unknown function (DUF3889) 16 104 2.9E-28 T 13-10-2018 IPR024987 Protein of unknown function DUF3889 COP00_21735 7a5f2516f661396a197417e7e37901aa 106 Gene3D G3DSA:3.10.450.390 23 105 3.9E-11 T 13-10-2018 COP00_17295 4bc3c0de30b1e41de23ccb63693d5b99 174 Pfam PF12648 TcpE family 7 112 3.8E-23 T 13-10-2018 IPR025608 TcpE family COP00_02225 eed9ff428d1e25f157210ce93b134274 363 Pfam PF10087 Uncharacterized protein conserved in bacteria (DUF2325) 269 357 3.1E-12 T 13-10-2018 IPR016772 Uncharacterised conserved protein UCP020408 COP00_23765 bb691020dd0fd43b1dd5f2e1d04cc9c3 293 Gene3D G3DSA:1.10.3720.10 14 285 2.7E-62 T 13-10-2018 IPR035906 MetI-like superfamily COP00_23765 bb691020dd0fd43b1dd5f2e1d04cc9c3 293 SUPERFAMILY SSF161098 18 293 2.49E-68 T 13-10-2018 IPR035906 MetI-like superfamily COP00_23765 bb691020dd0fd43b1dd5f2e1d04cc9c3 293 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 287 5.2E-19 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 COP00_05720 556b0dc1052665a51aec5db2c1fcd620 67 Pfam PF10966 Protein of unknown function (DUF2768) 7 64 3.1E-26 T 13-10-2018 IPR020076 Protein of unknown function DUF2768 COP00_05720 556b0dc1052665a51aec5db2c1fcd620 67 ProDom PD054986 YPHE TRANSMEMBRANE MEMBRANE PRECURSOR BH1643 SIGNAL 2 67 5.0E-20 T 13-10-2018 IPR020076 Protein of unknown function DUF2768 COP00_03600 4e6078d55af48c0976759a6ad0831f18 146 Gene3D G3DSA:3.30.310.250 1 146 5.0E-54 T 13-10-2018 IPR038449 SirA superfamily COP00_03600 4e6078d55af48c0976759a6ad0831f18 146 Pfam PF10747 Sporulation inhibitor of replication protein SirA 3 141 5.6E-45 T 13-10-2018 IPR019683 Sporulation inhibitor of replication protein SirA COP00_20425 2864fd552789d9be51f3bfb17fa3b393 391 Pfam PF13088 BNR repeat-like domain 45 368 6.3E-70 T 13-10-2018 IPR011040 Sialidase KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18|Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 COP00_20425 2864fd552789d9be51f3bfb17fa3b393 391 Gene3D G3DSA:2.120.10.10 27 298 1.7E-44 T 13-10-2018 COP00_20425 2864fd552789d9be51f3bfb17fa3b393 391 SUPERFAMILY SSF50939 29 388 5.33E-62 T 13-10-2018 IPR036278 Sialidase superfamily KEGG: 00511+3.2.1.18|KEGG: 00600+3.2.1.18|Reactome: R-HSA-1660662|Reactome: R-HSA-4085001 COP00_03260 011c310a843b6b22c97abb060c7c765a 63 Pfam PF06341 Protein of unknown function (DUF1056) 13 56 1.6E-5 T 13-10-2018 IPR009406 Protein of unknown function DUF1056 COP00_02305 2c5eb953b16f751fdcd67f71c954f34b 231 SMART SM01040 14 96 7.7E-41 T 13-10-2018 IPR003497 BRO N-terminal domain COP00_02305 2c5eb953b16f751fdcd67f71c954f34b 231 Pfam PF02498 BRO family, N-terminal domain 14 96 6.3E-28 T 13-10-2018 IPR003497 BRO N-terminal domain COP00_21885 58062c8c39053367748ffd858ef7dbc5 116 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 7 113 2.4E-21 T 13-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 COP00_21885 58062c8c39053367748ffd858ef7dbc5 116 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 3 115 16.371 T 13-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 COP00_21885 58062c8c39053367748ffd858ef7dbc5 116 TIGRFAM TIGR00494 crcB: protein CrcB 7 116 1.4E-31 T 13-10-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 COP00_04485 a6c4c6a4117df457c7863c305f919e31 161 SUPERFAMILY SSF109854 24 152 1.98E-20 T 13-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes COP00_04485 a6c4c6a4117df457c7863c305f919e31 161 Pfam PF12867 DinB superfamily 24 144 1.9E-14 T 13-10-2018 IPR024775 DinB-like domain COP00_04485 a6c4c6a4117df457c7863c305f919e31 161 Gene3D G3DSA:1.20.120.450 21 157 7.8E-20 T 13-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes COP00_06830 680cb6627ad5761468d7ec5a3161636f 81 Pfam PF11117 Protein of unknown function (DUF2626) 1 74 9.1E-37 T 13-10-2018 IPR020254 Protein of unknown function DUF2626 COP00_06830 680cb6627ad5761468d7ec5a3161636f 81 ProDom PD059814 YQGY TRANSMEMBRANE MEMBRANE PRECURSOR BH2821 SIGNAL 1 79 1.0E-37 T 13-10-2018 IPR020254 Protein of unknown function DUF2626 COP00_04345 ee06846b6616851c073146cd5f7946e7 642 SUPERFAMILY SSF46626 426 637 1.96E-16 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 COP00_04345 ee06846b6616851c073146cd5f7946e7 642 Gene3D G3DSA:1.10.760.10 422 562 9.1E-8 T 13-10-2018 IPR036909 Cytochrome c-like domain superfamily GO:0009055|GO:0020037 Reactome: R-HSA-611105 COP00_18205 48c7aff744ffc4ed4ad80919551277b9 332 Gene3D G3DSA:1.10.3470.10 7 331 6.0E-97 T 13-10-2018 IPR037294 ABC transporter, BtuC-like COP00_18205 48c7aff744ffc4ed4ad80919551277b9 332 SUPERFAMILY SSF81345 7 325 7.59E-81 T 13-10-2018 IPR037294 ABC transporter, BtuC-like COP00_18205 48c7aff744ffc4ed4ad80919551277b9 332 Pfam PF01032 FecCD transport family 21 325 1.5E-93 T 13-10-2018 IPR000522 ABC transporter, permease protein, BtuC-like GO:0005215|GO:0016020 COP00_10215 3d6e94d888415ab39ec032b48cf05f06 182 ProDom PD102989 YKOP PLASMID 1 182 2.0E-76 T 13-10-2018 COP00_08030 497f4fc3373fa4f75bd1b9858ba29827 54 Pfam PF09680 Protein of unknown function (Tiny_TM_bacill) 30 53 4.3E-12 T 13-10-2018 IPR010070 Sporulation protein YjcZ-like COP00_08030 497f4fc3373fa4f75bd1b9858ba29827 54 TIGRFAM TIGR01732 tiny_TM_bacill: conserved hypothetical protein 27 53 1.8E-10 T 13-10-2018 IPR010070 Sporulation protein YjcZ-like COP00_07510 c4f375b683601a05ba0fa197492dc35d 189 SMART SM00903 12 150 4.3E-13 T 13-10-2018 IPR002563 Flavin reductase like domain GO:0010181 COP00_07510 c4f375b683601a05ba0fa197492dc35d 189 SUPERFAMILY SSF50475 8 173 2.7E-37 T 13-10-2018 COP00_07510 c4f375b683601a05ba0fa197492dc35d 189 Pfam PF01613 Flavin reductase like domain 13 144 9.6E-25 T 13-10-2018 IPR002563 Flavin reductase like domain GO:0010181 COP00_07510 c4f375b683601a05ba0fa197492dc35d 189 Gene3D G3DSA:2.30.110.10 2 177 9.3E-47 T 13-10-2018 IPR012349 FMN-binding split barrel GO:0048037 COP00_00235 5550028d6dfd7ee581c09f9dc5bf86d1 242 TIGRFAM TIGR02909 spore_YkwD: uncharacterized protein, YkwD family 119 241 6.7E-62 T 13-10-2018 IPR014258 CAP domain, YkwD-like COP00_00235 5550028d6dfd7ee581c09f9dc5bf86d1 242 Gene3D G3DSA:3.40.33.10 6 240 4.1E-66 T 13-10-2018 IPR035940 CAP superfamily COP00_00235 5550028d6dfd7ee581c09f9dc5bf86d1 242 SUPERFAMILY SSF55797 119 238 7.33E-27 T 13-10-2018 IPR035940 CAP superfamily COP00_00235 5550028d6dfd7ee581c09f9dc5bf86d1 242 Pfam PF00188 Cysteine-rich secretory protein family 127 238 9.2E-23 T 13-10-2018 IPR014044 CAP domain COP00_00305 1c4a68a4d5edfae084e0312938382824 49 SUPERFAMILY SSF144020 4 46 4.71E-6 T 13-10-2018 IPR024064 FdhE-like superfamily COP00_11395 e762f453f01b9836554b5fa9b6fc90ae 296 SUPERFAMILY SSF161098 56 284 7.59E-63 T 13-10-2018 IPR035906 MetI-like superfamily COP00_11395 e762f453f01b9836554b5fa9b6fc90ae 296 SUPERFAMILY SSF160964 7 50 9.42E-6 T 13-10-2018 COP00_11395 e762f453f01b9836554b5fa9b6fc90ae 296 Gene3D G3DSA:1.10.3720.10 52 295 8.4E-71 T 13-10-2018 IPR035906 MetI-like superfamily COP00_11395 e762f453f01b9836554b5fa9b6fc90ae 296 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 87 286 6.7E-19 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 COP00_01710 b77878cdad9e907b599e7e559a6beee1 263 Pfam PF11868 Protein of unknown function (DUF3388) 72 261 3.0E-105 T 13-10-2018 IPR024514 Domain of unknown function DUF3388 COP00_01710 b77878cdad9e907b599e7e559a6beee1 263 PIRSF PIRSF021288 1 262 7.8E-144 T 13-10-2018 IPR016784 Uncharacterised protein UCP021288 with ACT domain COP00_01710 b77878cdad9e907b599e7e559a6beee1 263 SUPERFAMILY SSF55021 6 71 3.37E-7 T 13-10-2018 COP00_03505 0ee561f046a28d3c1bab1658fd06266a 296 Pfam PF13515 Fusaric acid resistance protein-like 27 147 1.1E-18 T 13-10-2018 COP00_01775 7b363523b95cfb530d063f80b61c3b32 182 Pfam PF10628 Outer spore coat protein E (CotE) 3 176 3.9E-68 T 13-10-2018 IPR018901 Spore coat protein CotE COP00_18560 530dad012e9ae12419f60f559881eb49 486 Pfam PF12704 MacB-like periplasmic core domain 143 264 1.3E-10 T 13-10-2018 IPR025857 MacB-like periplasmic core domain COP00_18560 530dad012e9ae12419f60f559881eb49 486 Pfam PF02687 FtsX-like permease family 349 477 1.9E-14 T 13-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 COP00_07265 e5d66f8b0cb0a6eed29051c23fd15994 330 Pfam PF12127 SigmaW regulon antibacterial 11 319 2.9E-165 T 13-10-2018 IPR022853 Uncharacterised protein family YdfA-immunity COP00_07265 e5d66f8b0cb0a6eed29051c23fd15994 330 Hamap MF_01562 UPF0365 protein . 3 323 50.249 T 13-10-2018 IPR022853 Uncharacterised protein family YdfA-immunity COP00_22435 0ca45551173ae1475622ebb93bfec0f5 303 Pfam PF04294 VanW like protein 148 276 3.2E-51 T 13-10-2018 IPR007391 Vancomycin resistance VanW COP00_15020 3a0135569625ab9581d3e8f013d0b9c1 744 Pfam PF13231 Dolichyl-phosphate-mannose-protein mannosyltransferase 64 222 1.1E-34 T 13-10-2018 IPR038731 Glycosyltransferase RgtA/B/C/D-like COP00_10875 79347c66cedce8fc27aafbe9c8495f24 278 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 223 236 - T 13-10-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 COP00_10875 79347c66cedce8fc27aafbe9c8495f24 278 SUPERFAMILY SSF53613 2 266 8.73E-52 T 13-10-2018 IPR029056 Ribokinase-like COP00_10875 79347c66cedce8fc27aafbe9c8495f24 278 Gene3D G3DSA:3.40.1190.20 3 268 6.1E-50 T 13-10-2018 IPR029056 Ribokinase-like COP00_10875 79347c66cedce8fc27aafbe9c8495f24 278 Pfam PF00294 pfkB family carbohydrate kinase 18 265 5.2E-37 T 13-10-2018 IPR011611 Carbohydrate kinase PfkB COP00_13535 8844e41944994ab8484a156d292b57da 137 Pfam PF14183 YwpF-like protein 2 135 1.2E-47 T 13-10-2018 IPR025573 YwpF-like protein COP00_08160 faa10ad637a69a0424680ea92fd6b0c3 43 Pfam PF13056 Protein of unknown function (DUF3918) 2 43 1.4E-22 T 13-10-2018 IPR025029 Protein of unknown function DUF3918 COP00_22345 5aab5687644fba95c423f10aa7555aa6 193 PIRSF PIRSF011560 4 192 4.7E-78 T 13-10-2018 IPR010461 Competence protein ComK GO:0030420 COP00_22345 5aab5687644fba95c423f10aa7555aa6 193 Pfam PF06338 ComK protein 10 158 1.2E-58 T 13-10-2018 IPR010461 Competence protein ComK GO:0030420 COP00_11140 768d7928e4d9cb33feb0bf1774705c2b 52 Pfam PF13113 Protein of unknown function (DUF3970) 1 51 2.1E-25 T 13-10-2018 IPR025088 Protein of unknown function DUF3970 COP00_18735 ff782add0f96c4002383ec577d52c87f 403 Pfam PF01566 Natural resistance-associated macrophage protein 50 370 1.6E-22 T 13-10-2018 IPR001046 NRAMP family GO:0016020|GO:0030001|GO:0046873 Reactome: R-HSA-425410 COP00_18535 8b558871b977be0bc6a24cb15fb435ef 547 PIRSF PIRSF005690 32 524 1.4E-193 T 13-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 COP00_18535 8b558871b977be0bc6a24cb15fb435ef 547 Pfam PF03323 Bacillus/Clostridium GerA spore germination protein 45 509 3.2E-191 T 13-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 COP00_05930 680f774908549c1667d8823aeed61a0f 178 Pfam PF07670 Nucleoside recognition 46 146 2.6E-7 T 13-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 COP00_23040 5303730b2f208e1589dedf0eff4f743d 49 TIGRFAM TIGR01732 tiny_TM_bacill: conserved hypothetical protein 24 47 2.0E-11 T 13-10-2018 IPR010070 Sporulation protein YjcZ-like COP00_23040 5303730b2f208e1589dedf0eff4f743d 49 Pfam PF09680 Protein of unknown function (Tiny_TM_bacill) 25 47 1.3E-12 T 13-10-2018 IPR010070 Sporulation protein YjcZ-like COP00_08815 61e98dc2621a369aeac559b1f00511f6 134 Pfam PF03994 Domain of Unknown Function (DUF350) 15 68 5.0E-14 T 13-10-2018 IPR007140 Protein of unknown function DUF350 COP00_08815 61e98dc2621a369aeac559b1f00511f6 134 Pfam PF03994 Domain of Unknown Function (DUF350) 80 134 1.3E-15 T 13-10-2018 IPR007140 Protein of unknown function DUF350 COP00_11510 04debe57670e51a208221bff612283cf 224 Gene3D G3DSA:3.40.50.880 2 215 5.6E-44 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like COP00_11510 04debe57670e51a208221bff612283cf 224 Pfam PF03575 Peptidase family S51 2 197 3.2E-28 T 13-10-2018 IPR005320 Peptidase S51 GO:0006508|GO:0008236 COP00_11510 04debe57670e51a208221bff612283cf 224 SUPERFAMILY SSF52317 25 205 1.25E-18 T 13-10-2018 IPR029062 Class I glutamine amidotransferase-like COP00_12885 0764f054b0a3406d4ab8c1fe8627eef4 245 Gene3D G3DSA:3.90.70.10 54 245 3.5E-68 T 13-10-2018 COP00_12885 0764f054b0a3406d4ab8c1fe8627eef4 245 PIRSF PIRSF032442 6 245 3.3E-76 T 13-10-2018 IPR016997 Uncharacterised conserved protein UCP032442 COP00_12885 0764f054b0a3406d4ab8c1fe8627eef4 245 Pfam PF13529 Peptidase_C39 like family 57 217 3.5E-40 T 13-10-2018 IPR039564 Peptidase C39-like COP00_14680 64b693f27bfb1697b63a695f8947155a 112 ProDom PD070249 YXLC MEMBRANE TRANSMEMBRANE 12 106 2.0E-22 T 13-10-2018 IPR035238 Protein of unknown function DUF5345 COP00_14680 64b693f27bfb1697b63a695f8947155a 112 Pfam PF17280 Family of unknown function (DUF5345) 13 89 1.1E-19 T 13-10-2018 IPR035238 Protein of unknown function DUF5345 COP00_10680 5f1519fdb22bcbeae9f54265a1f24f56 74 Pfam PF14169 Cold-inducible protein YdjO 2 60 3.2E-28 T 13-10-2018 IPR025916 Cold-inducible protein YdjO COP00_19940 15dab8b2c3240c6302aab8c5f6d202cb 150 Pfam PF10787 Uncharacterised protein from bacillus cereus group 1 141 2.6E-67 T 13-10-2018 IPR019723 Uncharacterised protein, YfmQ COP00_05295 3c5817ba7c28f5806c023c35b9572d52 61 Pfam PF10782 Zinc-finger 2 58 3.5E-30 T 13-10-2018 IPR019718 Protein of unknown function DUF2602 COP00_08075 140dabfaee4880ae2cafdbc57d9e4960 225 Pfam PF07423 Protein of unknown function (DUF1510) 9 224 3.7E-81 T 13-10-2018 IPR009988 Protein of unknown function DUF1510 COP00_14380 3502a1f22365203b48fe0f049b520384 104 Pfam PF04341 Protein of unknown function, DUF485 13 95 4.9E-26 T 13-10-2018 IPR007436 Protein of unknown function DUF485 COP00_14315 818da936eb2699fd3d3c3c986f6c71b3 154 Pfam PF13471 Transglutaminase-like superfamily 25 137 3.4E-13 T 13-10-2018 IPR032708 Microcin J25-processing protein McjB, C-terminal COP00_11220 f2e2a16cecd1bd9cdb3135f76154bb4c 468 Pfam PF01955 Adenosylcobinamide amidohydrolase 285 457 3.3E-16 T 13-10-2018 IPR002808 Adenosylcobinamide amidohydrolase, CbiZ COP00_11220 f2e2a16cecd1bd9cdb3135f76154bb4c 468 SMART SM00382 26 216 3.4E-12 T 13-10-2018 IPR003593 AAA+ ATPase domain COP00_11220 f2e2a16cecd1bd9cdb3135f76154bb4c 468 Gene3D G3DSA:3.40.50.300 1 256 1.2E-67 T 13-10-2018 COP00_11220 f2e2a16cecd1bd9cdb3135f76154bb4c 468 Pfam PF00005 ABC transporter 18 167 2.2E-31 T 13-10-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 COP00_11220 f2e2a16cecd1bd9cdb3135f76154bb4c 468 SUPERFAMILY SSF52540 2 229 3.52E-61 T 13-10-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase COP00_14875 49af64da2524559d198aa70cba511005 618 Pfam PF14449 Pre-toxin TG 256 320 1.1E-16 T 13-10-2018 IPR027797 Pre-toxin TG domain COP00_14875 49af64da2524559d198aa70cba511005 618 Pfam PF04740 LXG domain of WXG superfamily 2 200 2.8E-45 T 13-10-2018 IPR006829 LXG domain COP00_13160 e9f0f431a82235f8dcbcdaca519c4a49 392 SUPERFAMILY SSF53756 27 360 2.15E-23 T 13-10-2018 COP00_13160 e9f0f431a82235f8dcbcdaca519c4a49 392 Pfam PF13692 Glycosyl transferases group 1 218 333 5.0E-10 T 13-10-2018 COP00_13160 e9f0f431a82235f8dcbcdaca519c4a49 392 Gene3D G3DSA:3.40.50.2000 209 358 8.2E-25 T 13-10-2018 COP00_13160 e9f0f431a82235f8dcbcdaca519c4a49 392 Gene3D G3DSA:3.40.50.2000 26 208 3.0E-5 T 13-10-2018 COP00_22515 84ee30eaf92098978863761ebdd44463 97 Pfam PF12650 Domain of unknown function (DUF3784) 11 93 1.4E-8 T 13-10-2018 IPR017259 Uncharacterised conserved protein UCP037672 COP00_07030 a3e9f21b925c2544fa5fa06e07773506 309 SUPERFAMILY SSF161098 30 303 5.76E-39 T 13-10-2018 IPR035906 MetI-like superfamily COP00_07030 a3e9f21b925c2544fa5fa06e07773506 309 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 29 307 1.9E-90 T 13-10-2018 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 COP00_07030 a3e9f21b925c2544fa5fa06e07773506 309 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 107 307 7.2E-32 T 13-10-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0016020|GO:0055085 COP00_07030 a3e9f21b925c2544fa5fa06e07773506 309 Gene3D G3DSA:1.10.3720.10 84 308 4.7E-40 T 13-10-2018 IPR035906 MetI-like superfamily COP00_01750 3fd2de33058f1ba586de6cb0de005ade 304 Pfam PF01244 Membrane dipeptidase (Peptidase family M19) 3 299 2.1E-90 T 13-10-2018 IPR008257 Peptidase M19 GO:0006508|GO:0016805 MetaCyc: PWY-7533|Reactome: R-HSA-2142691|Reactome: R-HSA-5423646 COP00_01750 3fd2de33058f1ba586de6cb0de005ade 304 SUPERFAMILY SSF51556 3 299 1.21E-72 T 13-10-2018 IPR032466 Metal-dependent hydrolase COP00_01750 3fd2de33058f1ba586de6cb0de005ade 304 Gene3D G3DSA:3.20.20.140 1 303 1.2E-98 T 13-10-2018 COP00_18010 454977abc622ea68759962851fd674c6 395 SUPERFAMILY SSF51621 35 313 2.2E-17 T 13-10-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain superfamily GO:0003824 COP00_18010 454977abc622ea68759962851fd674c6 395 Pfam PF15617 C-C_Bond_Lyase of the TIM-Barrel fold 31 369 5.4E-120 T 13-10-2018 IPR039480 C-C bond lyase-like COP00_18010 454977abc622ea68759962851fd674c6 395 Gene3D G3DSA:3.20.20.60 277 375 6.3E-7 T 13-10-2018 COP00_22695 4c60c56f507e82292d0e68afed4d8270 65 Pfam PF12758 Protein of unknown function (DUF3813) 1 63 6.6E-27 T 13-10-2018 IPR024217 Protein of unknown function DUF3813 COP00_14335 3183111f6842740b2689e91094f5ebbc 122 Pfam PF03626 Prokaryotic Cytochrome C oxidase subunit IV 17 89 4.6E-14 T 13-10-2018 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 COP00_14335 3183111f6842740b2689e91094f5ebbc 122 TIGRFAM TIGR02901 QoxD: cytochrome aa3 quinol oxidase, subunit IV 9 97 1.4E-35 T 13-10-2018 IPR014250 Quinol oxidase subunit IV GO:0016021|GO:0016682|GO:0042773 COP00_20295 af663bddad5499c8cc930a2110b760a2 232 PRINTS PR01837 MgtC/SapB protein signature 71 93 6.6E-41 T 13-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 COP00_20295 af663bddad5499c8cc930a2110b760a2 232 PRINTS PR01837 MgtC/SapB protein signature 37 55 6.6E-41 T 13-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 COP00_20295 af663bddad5499c8cc930a2110b760a2 232 PRINTS PR01837 MgtC/SapB protein signature 18 37 6.6E-41 T 13-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 COP00_20295 af663bddad5499c8cc930a2110b760a2 232 PRINTS PR01837 MgtC/SapB protein signature 99 123 6.6E-41 T 13-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 COP00_20295 af663bddad5499c8cc930a2110b760a2 232 Pfam PF02308 MgtC family 15 143 1.7E-32 T 13-10-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 COP00_04610 6a755340e7db638938f01c9399138938 57 Pfam PF14070 Putative motility protein 3 55 1.0E-17 T 13-10-2018 IPR025906 Putative motility protein COP00_05305 c377ec8fea2b4070bbb2dd7c21afcd10 233 Pfam PF02592 Putative vitamin uptake transporter 57 217 1.6E-48 T 13-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 COP00_05305 c377ec8fea2b4070bbb2dd7c21afcd10 233 TIGRFAM TIGR00697 TIGR00697: conserved hypothetical integral membrane protein 26 221 1.2E-71 T 13-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 COP00_05305 c377ec8fea2b4070bbb2dd7c21afcd10 233 Hamap MF_02088 Probable queuosine precursor transporter. 26 226 16.957 T 13-10-2018 IPR003744 Queuosine precursor transporter GO:1990397 COP00_19645 5ddca815d2e7b96b5d10df19848f5079 126 TIGRFAM TIGR01637 phage_arpU: phage transcriptional regulator, ArpU family 9 125 5.9E-30 T 13-10-2018 IPR006524 Transcription activator, ArpU family COP00_13580 e969897255a7c57d53f72cf273cc2635 397 Pfam PF07690 Major Facilitator Superfamily 17 273 4.8E-36 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 COP00_13580 e969897255a7c57d53f72cf273cc2635 397 Gene3D G3DSA:1.20.1250.20 5 384 2.1E-57 T 13-10-2018 COP00_13580 e969897255a7c57d53f72cf273cc2635 397 SUPERFAMILY SSF103473 2 386 7.06E-65 T 13-10-2018 IPR036259 MFS transporter superfamily COP00_19625 5f555d98a12d17cdc85905498d474ce5 138 Gene3D G3DSA:2.30.30.290 55 136 8.9E-12 T 13-10-2018 IPR023385 YopX-like, C-terminal COP00_19625 5f555d98a12d17cdc85905498d474ce5 138 Pfam PF09643 YopX protein 48 124 8.3E-13 T 13-10-2018 IPR019096 YopX protein COP00_19625 5f555d98a12d17cdc85905498d474ce5 138 SUPERFAMILY SSF159006 2 124 9.94E-22 T 13-10-2018 COP00_03415 115be9ddbb43502f72eab3d14deda646 407 Gene3D G3DSA:1.20.1530.20 2 385 4.0E-68 T 13-10-2018 IPR038770 Sodium/solute symporter superfamily COP00_03415 115be9ddbb43502f72eab3d14deda646 407 Pfam PF00999 Sodium/hydrogen exchanger family 13 372 9.1E-58 T 13-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 COP00_16895 6074a3b014acc3edbc0cddc40e1d22b7 254 Gene3D G3DSA:3.20.20.370 47 254 1.5E-56 T 13-10-2018 COP00_16895 6074a3b014acc3edbc0cddc40e1d22b7 254 Pfam PF01522 Polysaccharide deacetylase 54 175 8.5E-25 T 13-10-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 COP00_16895 6074a3b014acc3edbc0cddc40e1d22b7 254 TIGRFAM TIGR02764 spore_ybaN_pdaB: polysaccharide deacetylase family sporulation protein PdaB 53 243 1.1E-80 T 13-10-2018 IPR014132 Sporulation polysaccharide deacetylase, PdaB COP00_16895 6074a3b014acc3edbc0cddc40e1d22b7 254 SUPERFAMILY SSF88713 36 243 1.73E-50 T 13-10-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 COP00_20685 b344298d5a87e8d0649c1163fcfaeff4 43 Pfam PF11121 Protein of unknown function (DUF2639) 2 38 9.0E-22 T 13-10-2018 IPR022580 Protein of unknown function DUF2639 COP00_20685 b344298d5a87e8d0649c1163fcfaeff4 43 ProDom PD049467 YFLJ 1 43 8.0E-16 T 13-10-2018 IPR022580 Protein of unknown function DUF2639 COP00_23000 e710aa30029b1e749891f61ed9087a81 159 Pfam PF14153 Spore coat protein CotO 41 159 1.9E-28 T 13-10-2018 IPR025439 Spore coat protein CotO COP00_23000 e710aa30029b1e749891f61ed9087a81 159 Pfam PF14153 Spore coat protein CotO 5 78 2.4E-11 T 13-10-2018 IPR025439 Spore coat protein CotO COP00_05415 660dbb3fb829a62c1a2e8ae0e8e11584 438 SUPERFAMILY SSF53098 104 274 2.16E-27 T 13-10-2018 IPR012337 Ribonuclease H-like superfamily COP00_05415 660dbb3fb829a62c1a2e8ae0e8e11584 438 Pfam PF13482 RNase_H superfamily 105 273 9.2E-39 T 13-10-2018 IPR038720 YprB, ribonuclease H-like domain COP00_04465 a184b0ba37353cdebaf0c1ea0f6aaef5 110 TIGRFAM TIGR02222 chap_CsaA: export-related chaperone protein CsaA 4 109 4.0E-48 T 13-10-2018 IPR008231 Probable chaperone CsaA COP00_04465 a184b0ba37353cdebaf0c1ea0f6aaef5 110 Pfam PF01588 Putative tRNA binding domain 12 108 4.0E-18 T 13-10-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 COP00_04465 a184b0ba37353cdebaf0c1ea0f6aaef5 110 SUPERFAMILY SSF50249 4 109 1.64E-31 T 13-10-2018 IPR012340 Nucleic acid-binding, OB-fold COP00_04465 a184b0ba37353cdebaf0c1ea0f6aaef5 110 Gene3D G3DSA:2.40.50.140 2 110 3.2E-34 T 13-10-2018 COP00_08035 e18205b669bfe797675fa3624868c041 49 TIGRFAM TIGR02413 Bac_small_yrzI: Bacillus tandem small hypothetical protein 1 43 2.4E-18 T 13-10-2018 IPR012655 Uncharacterised protein YrzI COP00_08035 e18205b669bfe797675fa3624868c041 49 Pfam PF09501 Probable sporulation protein (Bac_small_yrzI) 1 44 3.7E-22 T 13-10-2018 IPR012655 Uncharacterised protein YrzI COP00_22490 643b53be2b853736e4faefe477aeaa8e 127 ProDom PD031981 GERMINATION SPORE GERPE PE PROBABLE SPORULATION 6 120 8.0E-36 T 13-10-2018 IPR024496 Spore germination protein GerPE COP00_22490 643b53be2b853736e4faefe477aeaa8e 127 Pfam PF10970 Spore germination protein GerPE 5 122 2.5E-43 T 13-10-2018 IPR024496 Spore germination protein GerPE COP00_13755 cd30fa8315d10ea8e47922f00a803f65 420 Pfam PF07690 Major Facilitator Superfamily 21 365 1.0E-35 T 13-10-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 COP00_13755 cd30fa8315d10ea8e47922f00a803f65 420 SUPERFAMILY SSF103473 5 406 3.27E-59 T 13-10-2018 IPR036259 MFS transporter superfamily COP00_13755 cd30fa8315d10ea8e47922f00a803f65 420 Gene3D G3DSA:1.20.1250.20 1 411 6.6E-52 T 13-10-2018 COP00_12270 17e840f532131cbc16377f823cea34b4 572 Pfam PF04740 LXG domain of WXG superfamily 2 201 3.8E-47 T 13-10-2018 IPR006829 LXG domain COP00_12270 17e840f532131cbc16377f823cea34b4 572 Pfam PF14449 Pre-toxin TG 255 321 5.4E-16 T 13-10-2018 IPR027797 Pre-toxin TG domain COP00_20710 de0d52f7b80832df074a07befbb7c3b6 124 Pfam PF09350 Domain of unknown function (DUF1992) 8 73 5.2E-21 T 13-10-2018 IPR018961 DnaJ homologue, subfamily C, member 28, conserved domain COP00_14840 1ab67860df9e728651d0adb5e368323e 178 Gene3D G3DSA:2.30.110.10 1 162 2.5E-49 T 13-10-2018 IPR012349 FMN-binding split barrel GO:0048037 COP00_14840 1ab67860df9e728651d0adb5e368323e 178 SUPERFAMILY SSF50475 2 160 4.12E-45 T 13-10-2018 COP00_14840 1ab67860df9e728651d0adb5e368323e 178 Pfam PF12900 Pyridoxamine 5'-phosphate oxidase 10 158 2.7E-28 T 13-10-2018 IPR024747 Pyridoxamine 5'-phosphate oxidase-related COP00_12570 625cec86e73824566c66a95a4ab5229f 113 Pfam PF11750 Protein of unknown function (DUF3307) 3 106 9.4E-14 T 13-10-2018 IPR021737 Bacteriophage phiKZ, Orf197 COP00_05775 4e1e2aebf607746013cdadc28ae8bad1 58 ProDom PD052359 YPFB 1 57 1.0E-13 T 13-10-2018 IPR035281 Protein of unknown function DUF5359 COP00_05775 4e1e2aebf607746013cdadc28ae8bad1 58 Pfam PF17313 Family of unknown function (DUF5359) 1 56 7.9E-26 T 13-10-2018 IPR035281 Protein of unknown function DUF5359 COP00_17525 2646d2cdd831006bae8ad504905c8899 245 Pfam PF01925 Sulfite exporter TauE/SafE 4 241 1.1E-40 T 13-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 COP00_06040 30892ce6606ebb832cc278399ac8a604 489 Pfam PF03323 Bacillus/Clostridium GerA spore germination protein 28 479 2.5E-150 T 13-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 COP00_06040 30892ce6606ebb832cc278399ac8a604 489 PIRSF PIRSF005690 6 489 2.3E-141 T 13-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 COP00_10230 3d25c8162aa4d9dd74e196a50a2c0820 383 Pfam PF01594 AI-2E family transporter 32 364 1.3E-85 T 13-10-2018 IPR002549 Transmembrane protein TqsA-like COP00_06850 25a828b660e6d6edcc7da29832a36a0b 367 SUPERFAMILY SSF82171 49 348 1.44E-10 T 13-10-2018 COP00_03940 946d1a166f355866d2ed663df4bdf5e6 270 Pfam PF10020 Uncharacterized protein conserved in bacteria (DUF2262) 129 268 3.1E-44 T 13-10-2018 IPR019260 Domain of unknown function DUF2262 COP00_19050 3146ccc4449dd093b6cd628a03f92484 93 Gene3D G3DSA:1.10.1220.10 1 93 2.1E-39 T 13-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 COP00_16590 b8b0c5fb4428bc5c1bab160100c25349 170 Pfam PF05991 YacP-like NYN domain 4 166 1.2E-55 T 13-10-2018 IPR010298 Protein of unknown function DUF901 COP00_09600 ec1631613e0cc34dfc7cf0511522eed2 254 SUPERFAMILY SSF51735 2 252 8.2E-31 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily COP00_09600 ec1631613e0cc34dfc7cf0511522eed2 254 Gene3D G3DSA:3.40.50.720 1 245 1.7E-34 T 13-10-2018 COP00_09600 ec1631613e0cc34dfc7cf0511522eed2 254 Pfam PF01370 NAD dependent epimerase/dehydratase family 4 171 2.9E-14 T 13-10-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 COP00_10165 194d0b2c2f1518fd3822aa9b93956387 120 SUPERFAMILY SSF160631 26 115 1.2E-8 T 13-10-2018 COP00_22930 b20cf683dee7f671e4aa44466b43b02d 121 Hamap MF_01861 UPF0738 protein . 3 121 28.12 T 13-10-2018 IPR020908 Uncharacterised protein family UPF0738 COP00_18090 7574b13f6dd331e77c1d87e8ef7ef1f7 213 Pfam PF01810 LysE type translocator 13 203 2.4E-42 T 13-10-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 COP00_21825 b3c3429058fba0786c60889a61615e01 356 Pfam PF13791 Sigma factor regulator C-terminal 204 350 3.1E-38 T 13-10-2018 IPR025672 Sigma factor regulator C-terminal domain COP00_21825 b3c3429058fba0786c60889a61615e01 356 Pfam PF13800 Sigma factor regulator N-terminal 58 151 4.0E-23 T 13-10-2018 IPR029101 Sigma factor regulator, N-terminal COP00_00270 5d3add98a6fa899563e19ec41b15e903 153 Pfam PF14177 YkyB-like protein 13 149 1.1E-67 T 13-10-2018 IPR025552 YkyB-like protein COP00_09685 b312298c12f82793887d9150cceaa469 92 Pfam PF10732 Protein of unknown function (DUF2524) 1 84 6.1E-35 T 13-10-2018 IPR019668 Uncharacterised protein family YtzC COP00_21025 b15d3c7115a696a0b089e8b7b9820731 142 Pfam PF07681 DoxX 9 88 1.6E-19 T 13-10-2018 IPR032808 DoxX family COP00_21750 28c843b3fbb385c5b06c020c018d2b00 469 Pfam PF04293 SpoVR like protein 5 408 8.6E-168 T 13-10-2018 IPR007390 Sporulation stage V, protein R COP00_16870 d66a1c7737041e58dd84ef0f90f0a716 147 Pfam PF10730 Protein of unknown function (DUF2521) 1 147 8.9E-58 T 13-10-2018 IPR019667 Uncharacterised protein family YbaK COP00_21945 b7454547180464a9d2e369518c53300c 160 Pfam PF16302 Domain of unknown function (DUF4944) 34 159 2.3E-48 T 13-10-2018 IPR032545 Protein of unknown function DUF4944 COP00_21945 b7454547180464a9d2e369518c53300c 160 ProDom PD034585 YOAO YDHH MEMBRANE PRECURSOR TRANSMEMBRANE SIGNAL 1 157 1.0E-49 T 13-10-2018 IPR032545 Protein of unknown function DUF4944 COP00_06550 c900a8c02add53b1a7485a5201c757a5 100 Pfam PF12197 Bacillus cereus group antimicrobial protein 57 98 3.8E-19 T 13-10-2018 IPR020976 Antimicrobial peptide, lci COP00_08875 026a4ab80710d74f7b6374f770f81978 598 Pfam PF02554 Carbon starvation protein CstA 1 366 1.1E-146 T 13-10-2018 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 COP00_08875 026a4ab80710d74f7b6374f770f81978 598 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 416 537 4.4E-29 T 13-10-2018 IPR025299 CstA, C-terminal domain COP00_03630 70c77c936649cfe7cd10d75166fa05ea 142 ProDom PD086666 YNEK BH2332 11 140 2.0E-50 T 13-10-2018 IPR020203 Uncharacterised protein family, YneK COP00_03630 70c77c936649cfe7cd10d75166fa05ea 142 Pfam PF11084 Protein of unknown function (DUF2621) 3 141 2.3E-72 T 13-10-2018 IPR020203 Uncharacterised protein family, YneK COP00_12290 e7bc412b322f9a89595237f47a475e54 271 Pfam PF13730 Helix-turn-helix domain 30 84 3.1E-8 T 13-10-2018 COP00_20625 0802c473f77194e6c66366d0496285c1 192 Pfam PF04892 VanZ like family 41 176 2.3E-20 T 13-10-2018 IPR006976 VanZ-like COP00_02975 20f1857015db0d9971f592cc499bdb5b 114 Gene3D G3DSA:1.10.1220.10 48 111 2.3E-10 T 13-10-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 COP00_03550 c368f1bc1fee566786ec8de6a0b42462 252 SUPERFAMILY SSF54001 16 237 8.83E-11 T 13-10-2018 IPR038765 Papain-like cysteine peptidase superfamily COP00_11595 dccff9e41f619fab86dc8429721a0c65 207 Gene3D G3DSA:3.40.630.30 17 197 4.3E-27 T 13-10-2018 COP00_10805 9edbd9820c172d5e0d6fc0993117c01c 199 Pfam PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) 12 180 8.8E-31 T 13-10-2018 IPR019076 Sporulation lipoprotein YhcN/YlaJ-like COP00_07855 e60692a2b0ecb4680399bfb30b5ae595 275 Pfam PF03613 PTS system mannose/fructose/sorbose family IID component 7 274 1.8E-103 T 13-10-2018 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 COP00_07855 e60692a2b0ecb4680399bfb30b5ae595 275 TIGRFAM TIGR00828 EIID-AGA: PTS system, mannose/fructose/sorbose family, IID component 5 274 6.1E-143 T 13-10-2018 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 COP00_08365 4685406b1d51c0c787d6d9d78197c20d 207 Pfam PF09580 Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ) 15 204 6.6E-27 T 13-10-2018 IPR019076 Sporulation lipoprotein YhcN/YlaJ-like COP00_19540 4ea8b3bb02fcabcdf8c9a6533e671bf2 82 Gene3D G3DSA:1.10.260.40 1 81 1.2E-12 T 13-10-2018 COP00_19540 4ea8b3bb02fcabcdf8c9a6533e671bf2 82 SMART SM00530 5 60 1.1E-11 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 COP00_19540 4ea8b3bb02fcabcdf8c9a6533e671bf2 82 Pfam PF01381 Helix-turn-helix 6 59 4.4E-14 T 13-10-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 COP00_19540 4ea8b3bb02fcabcdf8c9a6533e671bf2 82 SUPERFAMILY SSF47413 3 61 1.29E-11 T 13-10-2018 IPR010982 Lambda repressor-like, DNA-binding domain superfamily GO:0003677 COP00_13465 6d90c5a07000d5bd7f324dc603bf0392 178 Pfam PF02417 Chromate transporter 6 170 1.1E-35 T 13-10-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 COP00_08465 756950083a748cf5ed0897abf8d3e8e5 172 Pfam PF04093 rod shape-determining protein MreD 2 163 7.6E-37 T 13-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 COP00_08465 756950083a748cf5ed0897abf8d3e8e5 172 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 7 158 2.9E-25 T 13-10-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 COP00_19300 80af64d34ea7bef431dc4fbc06e40b19 210 Pfam PF10067 Predicted membrane protein (DUF2306) 46 190 7.6E-35 T 13-10-2018 IPR018750 Protein of unknown function DUF2306, membrane COP00_18655 b2b928ed0647023434fa391d42a47196 105 Pfam PF00106 short chain dehydrogenase 7 87 5.0E-19 T 13-10-2018 IPR002347 Short-chain dehydrogenase/reductase SDR COP00_18655 b2b928ed0647023434fa391d42a47196 105 Gene3D G3DSA:3.40.50.720 1 90 1.1E-23 T 13-10-2018 COP00_18655 b2b928ed0647023434fa391d42a47196 105 SUPERFAMILY SSF51735 2 87 2.65E-23 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily COP00_21585 f1daef258f40213d083241195524f66e 217 Pfam PF07875 Coat F domain 120 182 7.0E-17 T 13-10-2018 IPR012851 Spore coat protein CotF-like COP00_15090 b8a819c992c50f2dcac16e6402786f87 199 PIRSF PIRSF037394 1 190 1.3E-67 T 13-10-2018 IPR017195 ABC-type thiamin-related transport system, permease component 1, predicted COP00_15090 b8a819c992c50f2dcac16e6402786f87 199 Pfam PF09819 ABC-type cobalt transport system, permease component 6 124 6.4E-38 T 13-10-2018 IPR017195 ABC-type thiamin-related transport system, permease component 1, predicted COP00_18910 b2291d9bcf15d2f51bbc934df9bab4d9 280 Pfam PF12787 EcsC protein family 10 260 1.2E-80 T 13-10-2018 IPR024787 EcsC protein COP00_18910 b2291d9bcf15d2f51bbc934df9bab4d9 280 ProDom PD038378 ECSC YDBA CC1715 BH1193 ECSC-LIKE ESCC 9 263 3.0E-73 T 13-10-2018 COP00_11340 3584b8450c0a4877c885c1e87cf7acf1 666 Pfam PF00999 Sodium/hydrogen exchanger family 7 410 2.6E-62 T 13-10-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 COP00_11340 3584b8450c0a4877c885c1e87cf7acf1 666 TIGRFAM TIGR00831 a_cpa1: Na+/H+ antiporter 4 524 3.4E-100 T 13-10-2018 IPR004705 Cation/H+ exchanger, CPA1 family, bacteria GO:0006812|GO:0015299|GO:0016021 COP00_04070 3c87b4ca021ad5ff560525340ae1bd91 95 Pfam PF12823 Domain of unknown function (DUF3817) 6 93 1.7E-23 T 13-10-2018 IPR023845 Domain of unknown function DUF3817, transmembrane COP00_04070 3c87b4ca021ad5ff560525340ae1bd91 95 TIGRFAM TIGR03954 integ_memb_HG: integral membrane protein 8 91 3.0E-27 T 13-10-2018 IPR023845 Domain of unknown function DUF3817, transmembrane COP00_19225 a12e4f0d4205b697e8ae915d4e9622a9 113 Gene3D G3DSA:1.10.10.10 9 113 3.7E-37 T 13-10-2018 IPR036388 Winged helix-like DNA-binding domain superfamily COP00_19225 a12e4f0d4205b697e8ae915d4e9622a9 113 Pfam PF01638 HxlR-like helix-turn-helix 24 111 1.1E-32 T 13-10-2018 IPR002577 Helix-turn-helix, HxlR type COP00_19225 a12e4f0d4205b697e8ae915d4e9622a9 113 SUPERFAMILY SSF46785 14 110 7.59E-33 T 13-10-2018 IPR036390 Winged helix DNA-binding domain superfamily COP00_23840 066ec316e0e43fb79e88369cd08ca0ff 439 Gene3D G3DSA:1.20.1740.10 8 439 3.8E-93 T 13-10-2018 COP00_23840 066ec316e0e43fb79e88369cd08ca0ff 439 Pfam PF13520 Amino acid permease 12 406 2.7E-65 T 13-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 COP00_23840 066ec316e0e43fb79e88369cd08ca0ff 439 PIRSF PIRSF006060 1 438 3.5E-85 T 13-10-2018 IPR002293 Amino acid/polyamine transporter I GO:0016020|GO:0022857|GO:0055085 COP00_08740 4c87b320004de159213b424b460e01e0 147 Gene3D G3DSA:3.30.1380.20 1 147 3.3E-60 T 13-10-2018 COP00_08740 4c87b320004de159213b424b460e01e0 147 SUPERFAMILY SSF111126 16 126 4.03E-21 T 13-10-2018 IPR024096 NO signalling/Golgi transport ligand-binding domain superfamily COP00_08740 4c87b320004de159213b424b460e01e0 147 Pfam PF10702 Protein of unknown function (DUF2507) 19 140 2.5E-49 T 13-10-2018 IPR019642 Protein of unknown function DUF2507 COP00_03660 ce7342ff0ad83c4c49e96b19cb9a445f 41 Pfam PF13040 Fur-regulated basic protein B 2 38 9.0E-16 T 13-10-2018 IPR025004 Transcriptional regulatory protein SenN/SenS COP00_17230 9435dad61ad2f49c526361c5de12acaf 53 Pfam PF03190 Protein of unknown function, DUF255 8 52 7.6E-20 T 13-10-2018 IPR004879 Domain of unknown function DUF255 COP00_17230 9435dad61ad2f49c526361c5de12acaf 53 Gene3D G3DSA:3.40.30.10 5 53 1.1E-20 T 13-10-2018 COP00_17230 9435dad61ad2f49c526361c5de12acaf 53 SUPERFAMILY SSF52833 3 52 2.52E-11 T 13-10-2018 IPR036249 Thioredoxin-like superfamily COP00_23770 1980a2415df1b634ecea693936c2b9de 344 Gene3D G3DSA:1.50.10.10 5 339 1.3E-91 T 13-10-2018 IPR012341 Six-hairpin glycosidase-like superfamily GO:0003824 COP00_23770 1980a2415df1b634ecea693936c2b9de 344 Pfam PF07470 Glycosyl Hydrolase Family 88 21 338 2.8E-98 T 13-10-2018 IPR010905 Glycosyl hydrolase, family 88 COP00_23770 1980a2415df1b634ecea693936c2b9de 344 SUPERFAMILY SSF48208 16 337 2.24E-63 T 13-10-2018 IPR008928 Six-hairpin glycosidase superfamily GO:0003824 COP00_13475 4648472913cd19229bc8e66e38f614eb 250 PIRSF PIRSF016557 1 250 1.7E-99 T 13-10-2018 IPR016667 Capsular polysaccharide synthesis, CpsB/CapC GO:0004725|GO:0030145 COP00_13475 4648472913cd19229bc8e66e38f614eb 250 Gene3D G3DSA:3.20.20.140 1 250 2.9E-93 T 13-10-2018 COP00_13475 4648472913cd19229bc8e66e38f614eb 250 SUPERFAMILY SSF89550 1 198 3.14E-18 T 13-10-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 COP00_14225 fa3330b70f7eaa7e8037e5611efeda08 270 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 6 262 2.6E-85 T 13-10-2018 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 COP00_14225 fa3330b70f7eaa7e8037e5611efeda08 270 SUPERFAMILY SSF53613 1 264 1.87E-74 T 13-10-2018 IPR029056 Ribokinase-like COP00_14225 fa3330b70f7eaa7e8037e5611efeda08 270 Pfam PF08543 Phosphomethylpyrimidine kinase 13 260 2.0E-88 T 13-10-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 COP00_14225 fa3330b70f7eaa7e8037e5611efeda08 270 Gene3D G3DSA:3.40.1190.20 1 269 8.6E-93 T 13-10-2018 IPR029056 Ribokinase-like COP00_05690 264929935c5a147a8deb64c1127eb293 258 Pfam PF07307 Heptaprenyl diphosphate synthase (HEPPP synthase) subunit 1 21 225 1.8E-76 T 13-10-2018 IPR009920 Heptaprenyl diphosphate synthase subunit 1 GO:0009234 KEGG: 00900+2.5.1.30|MetaCyc: PWY-5807 COP00_19530 a371f9b954260b7df058d7a5b097a4f1 405 Gene3D G3DSA:1.10.443.10 186 402 1.1E-50 T 13-10-2018 IPR013762 Integrase-like, catalytic domain superfamily GO:0003677|GO:0006310|GO:0015074 COP00_19530 a371f9b954260b7df058d7a5b097a4f1 405 Pfam PF14659 Phage integrase, N-terminal SAM-like domain 74 131 4.1E-10 T 13-10-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 COP00_19530 a371f9b954260b7df058d7a5b097a4f1 405 Gene3D G3DSA:1.10.150.130 74 162 5.9E-24 T 13-10-2018 IPR010998 Integrase/recombinase, N-terminal COP00_19530 a371f9b954260b7df058d7a5b097a4f1 405 Pfam PF00589 Phage integrase family 189 387 1.9E-29 T 13-10-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 COP00_19530 a371f9b954260b7df058d7a5b097a4f1 405 Pfam PF14657 Arm DNA-binding domain 22 63 1.7E-9 T 13-10-2018 IPR028259 AP2-like integrase, N-terminal domain COP00_19530 a371f9b954260b7df058d7a5b097a4f1 405 SUPERFAMILY SSF56349 73 393 1.65E-62 T 13-10-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 COP00_15885 de028695b39b568e1d9bf1e5c28585c5 147 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 28 78 6.9E-21 T 13-10-2018 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 COP00_15885 de028695b39b568e1d9bf1e5c28585c5 147 Pfam PF02627 Carboxymuconolactone decarboxylase family 24 93 1.8E-19 T 13-10-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 COP00_15885 de028695b39b568e1d9bf1e5c28585c5 147 Gene3D G3DSA:1.20.1290.10 1 146 5.1E-50 T 13-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 COP00_15885 de028695b39b568e1d9bf1e5c28585c5 147 SUPERFAMILY SSF69118 9 144 1.54E-44 T 13-10-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 COP00_20165 5cf65ae9d6329a89797009aca7753fe3 441 Pfam PF00860 Permease family 16 402 1.8E-48 T 13-10-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0016020|GO:0022857|GO:0055085 COP00_20165 5cf65ae9d6329a89797009aca7753fe3 441 PIRSF PIRSF005353 1 441 6.4E-174 T 13-10-2018 IPR026033 Purine permease PbuG-like COP00_22760 0dcac2807e02458dcee29a42337f6788 61 Pfam PF11151 Protein of unknown function (DUF2929) 2 55 1.1E-19 T 13-10-2018 IPR021324 Protein of unknown function DUF2929 COP00_23275 03a1dc556dbf7904fef80d6b8e2ab087 137 Pfam PF14184 Regulatory protein YrvL 12 127 7.0E-27 T 13-10-2018 IPR025912 Regulatory protein YrvL COP00_23275 03a1dc556dbf7904fef80d6b8e2ab087 137 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 28 121 7.0E-34 T 13-10-2018 COP00_22870 68db370e26420b68cf2bf18cf4641db0 192 Pfam PF13508 Acetyltransferase (GNAT) domain 52 110 6.8E-9 T 13-10-2018 IPR000182 GNAT domain COP00_22870 68db370e26420b68cf2bf18cf4641db0 192 SUPERFAMILY SSF55729 47 114 2.4E-9 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase COP00_22870 68db370e26420b68cf2bf18cf4641db0 192 Gene3D G3DSA:3.40.630.30 1 136 8.7E-22 T 13-10-2018 COP00_06665 b34cabebdbab17bed326435e2bb2430c 93 Pfam PF10942 Protein of unknown function (DUF2619) 19 87 2.8E-26 T 13-10-2018 IPR020390 Uncharacterised protein family YqhV COP00_06665 b34cabebdbab17bed326435e2bb2430c 93 ProDom PD064940 YQHV TRANSMEMBRANE MEMBRANE BH2798 12 91 2.0E-34 T 13-10-2018 IPR020390 Uncharacterised protein family YqhV COP00_06135 04ea55b61832a709422db549062fadcc 186 Pfam PF13302 Acetyltransferase (GNAT) domain 16 159 1.3E-22 T 13-10-2018 IPR000182 GNAT domain COP00_06135 04ea55b61832a709422db549062fadcc 186 SUPERFAMILY SSF55729 12 183 6.38E-38 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase COP00_06135 04ea55b61832a709422db549062fadcc 186 Gene3D G3DSA:3.40.630.30 11 185 1.1E-40 T 13-10-2018 COP00_07530 6cce0c2223d9f0229ae42b405ff69b9e 116 PIRSF PIRSF033199 1 116 2.1E-57 T 13-10-2018 IPR014580 Uncharacterised conserved protein UCP033199 COP00_07530 6cce0c2223d9f0229ae42b405ff69b9e 116 Pfam PF09966 Uncharacterized protein conserved in bacteria (DUF2200) 5 115 3.7E-53 T 13-10-2018 IPR014580 Uncharacterised conserved protein UCP033199 COP00_07530 6cce0c2223d9f0229ae42b405ff69b9e 116 Gene3D G3DSA:1.10.8.290 1 116 1.1E-54 T 13-10-2018 IPR023204 SP1917 domain superfamily COP00_04295 88f4f154373d3cd4866e2cc67c876970 254 Pfam PF02679 (2R)-phospho-3-sulfolactate synthase (ComA) 10 248 4.3E-82 T 13-10-2018 IPR003830 (2R)-phospho-3-sulpholactate synthase, ComA KEGG: 00680+4.4.1.19 COP00_04295 88f4f154373d3cd4866e2cc67c876970 254 SUPERFAMILY SSF102110 7 250 1.44E-83 T 13-10-2018 IPR036112 (2R)-phospho-3-sulpholactate synthase, ComA superfamily KEGG: 00680+4.4.1.19 COP00_04295 88f4f154373d3cd4866e2cc67c876970 254 Gene3D G3DSA:3.20.20.70 4 253 9.0E-93 T 13-10-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 COP00_01045 acd7d307c322e0b0422d10e73a169bee 353 Pfam PF01384 Phosphate transporter family 16 304 1.4E-45 T 13-10-2018 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 COP00_07695 42ca9e055bca2871c43bbbc488c5c846 170 Gene3D G3DSA:3.80.30.30 9 152 5.7E-6 T 13-10-2018 COP00_14465 a2b74592691c1123268a262d527fcdc7 241 Pfam PF09529 Integral membrane protein (intg_mem_TP0381) 16 230 5.2E-59 T 13-10-2018 IPR011737 Conserved hypothetical protein CHP02206, TP0381 COP00_14465 a2b74592691c1123268a262d527fcdc7 241 TIGRFAM TIGR02206 intg_mem_TP0381: conserved hypothetical integral membrane protein TIGR02206 13 236 5.5E-61 T 13-10-2018 IPR011737 Conserved hypothetical protein CHP02206, TP0381 COP00_17890 6eea14ce67d57c5ac3df1ca1d611ccbe 89 Pfam PF04226 Transglycosylase associated protein 34 79 1.2E-12 T 13-10-2018 IPR007341 Transglycosylase-associated protein GO:0016021 COP00_13480 4c0f3d8ddc0473d69595e929859379e1 241 Pfam PF02706 Chain length determinant protein 7 90 1.2E-16 T 13-10-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 COP00_11700 8bdebc861ec13676233aa3fc6251c71f 63 Pfam PF06341 Protein of unknown function (DUF1056) 13 57 3.9E-5 T 13-10-2018 IPR009406 Protein of unknown function DUF1056 COP00_12105 9a72f1e3f34deae89ad3698d54f1e022 70 SUPERFAMILY SSF158388 3 69 7.59E-35 T 13-10-2018 IPR037247 YvfG domain superfamily COP00_12105 9a72f1e3f34deae89ad3698d54f1e022 70 Pfam PF09628 YvfG protein 3 69 2.6E-39 T 13-10-2018 IPR018590 Uncharacterised domain YvfG COP00_10545 b8ad49479503a6396cc56d5cf6d9d811 74 Pfam PF10676 Spore germination protein gerPA/gerPF 1 73 1.3E-20 T 13-10-2018 IPR019618 Spore germination protein GerPA/GerPF COP00_02130 d1d91aff921e541091f9571815ad7650 322 Pfam PF13536 Putative multidrug resistance efflux transporter 38 304 2.3E-105 T 13-10-2018 IPR032713 Putative multidrug resistance efflux transporter COP00_11175 a56026d64eed757c316d3714ba259564 243 PIRSF PIRSF031509 3 243 2.2E-63 T 13-10-2018 IPR016975 Cell wall-active antibiotic response protein GO:0016021 COP00_11175 a56026d64eed757c316d3714ba259564 243 Pfam PF09922 Cell wall-active antibiotics response 4TMS YvqF 128 240 1.6E-38 T 13-10-2018 IPR024425 Cell wall-active antibiotics response 4TMS YvqF COP00_05780 0173231a27f37cd28d5d236049f7b742 450 TIGRFAM TIGR02889 spore_YpeB: germination protein YpeB 3 440 7.7E-163 T 13-10-2018 IPR014239 Spore germination YpeB GO:0009847 COP00_05780 0173231a27f37cd28d5d236049f7b742 450 Pfam PF14620 YpeB sporulation 13 374 4.8E-134 T 13-10-2018 IPR014239 Spore germination YpeB GO:0009847 COP00_05780 0173231a27f37cd28d5d236049f7b742 450 Pfam PF03413 Peptidase propeptide and YPEB domain 377 436 0.0069 T 13-10-2018 IPR025711 PepSY domain COP00_04650 9bacb68890359cb74949e4b00ce83c2f 43 TIGRFAM TIGR04429 Phr_nterm: Phr family secreted Rap phosphatase inhibitor 1 24 6.6E-8 T 13-10-2018 IPR030968 Phr family, secreted RapG/RapK phosphatase inhibitor COP00_04815 82e292bf9cf1b6aa41ec2ce0ee7576a8 172 SUPERFAMILY SSF53056 12 170 1.57E-10 T 13-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 COP00_04815 82e292bf9cf1b6aa41ec2ce0ee7576a8 172 Gene3D G3DSA:3.40.1050.10 3 172 1.8E-10 T 13-10-2018 IPR036874 Carbonic anhydrase superfamily GO:0004089|GO:0008270 COP00_05750 1317ffa7d33b41da26c3d696a48ccd7a 200 PIRSF PIRSF036710 1 200 6.5E-57 T 13-10-2018 IPR014617 Predicted membrane protein, Bacillus YphA type COP00_19790 4a43ddb9573f43c5426a82b9c41273c0 138 Pfam PF15601 Immunity protein 70 5 135 1.3E-54 T 13-10-2018 IPR028185 Immunity protein 70 COP00_08955 1069b479f67031b8f6cd2ae5adf53379 87 PIRSF PIRSF002599 1 87 6.5E-9 T 13-10-2018 IPR012156 Cold shock, CspA GO:0003676 COP00_08955 1069b479f67031b8f6cd2ae5adf53379 87 Pfam PF06961 Protein of unknown function (DUF1294) 12 66 8.2E-21 T 13-10-2018 IPR010718 Protein of unknown function DUF1294 COP00_09670 42d5f379eb1e27c09bd3336181f4a834 327 PRINTS PR02026 YtrC/YtrD probable ABC transporter permease signature 94 108 1.1E-39 T 13-10-2018 IPR023264 ABC transporter, acetoin utilisation, predicted permease Ytrc/YtrD COP00_09670 42d5f379eb1e27c09bd3336181f4a834 327 PRINTS PR02026 YtrC/YtrD probable ABC transporter permease signature 171 183 1.1E-39 T 13-10-2018 IPR023264 ABC transporter, acetoin utilisation, predicted permease Ytrc/YtrD COP00_09670 42d5f379eb1e27c09bd3336181f4a834 327 PRINTS PR02026 YtrC/YtrD probable ABC transporter permease signature 154 168 1.1E-39 T 13-10-2018 IPR023264 ABC transporter, acetoin utilisation, predicted permease Ytrc/YtrD COP00_09670 42d5f379eb1e27c09bd3336181f4a834 327 PRINTS PR02026 YtrC/YtrD probable ABC transporter permease signature 240 254 1.1E-39 T 13-10-2018 IPR023264 ABC transporter, acetoin utilisation, predicted permease Ytrc/YtrD COP00_09670 42d5f379eb1e27c09bd3336181f4a834 327 PRINTS PR02026 YtrC/YtrD probable ABC transporter permease signature 260 279 1.1E-39 T 13-10-2018 IPR023264 ABC transporter, acetoin utilisation, predicted permease Ytrc/YtrD COP00_04220 2352fda62f7b84b9d7138900c3db7497 70 Pfam PF00364 Biotin-requiring enzyme 10 69 2.5E-19 T 13-10-2018 IPR000089 Biotin/lipoyl attachment COP00_04220 2352fda62f7b84b9d7138900c3db7497 70 SUPERFAMILY SSF51230 3 69 3.8E-21 T 13-10-2018 IPR011053 Single hybrid motif COP00_04220 2352fda62f7b84b9d7138900c3db7497 70 Gene3D G3DSA:2.40.50.100 3 70 1.5E-25 T 13-10-2018 COP00_13065 079a930c4ec27290bdf482e8944ed219 112 Gene3D G3DSA:3.30.160.170 8 108 1.0E-31 T 13-10-2018 IPR035924 FlaG-like superfamily COP00_13065 079a930c4ec27290bdf482e8944ed219 112 Pfam PF03646 FlaG protein 18 110 3.3E-25 T 13-10-2018 IPR005186 FlaG protein COP00_13065 079a930c4ec27290bdf482e8944ed219 112 SUPERFAMILY SSF160214 8 110 2.48E-27 T 13-10-2018 IPR035924 FlaG-like superfamily COP00_13885 7b317f91c2ae1053ca54ad00e0165e1b 227 TIGRFAM TIGR02837 spore_II_R: stage II sporulation protein R 6 170 1.9E-64 T 13-10-2018 IPR014202 Sporulation stage II, protein R COP00_13885 7b317f91c2ae1053ca54ad00e0165e1b 227 Pfam PF09551 Stage II sporulation protein R (spore_II_R) 40 165 4.7E-47 T 13-10-2018 IPR014202 Sporulation stage II, protein R COP00_00445 8645cc5a9012b47f17e02d32b9eeb4b1 217 Pfam PF04893 Yip1 domain 18 197 1.5E-18 T 13-10-2018 IPR006977 Yip1 domain GO:0016020 COP00_10415 66bb24f471b24814d9b285d3d7fc5166 348 Pfam PF02653 Branched-chain amino acid transport system / permease component 51 329 1.2E-45 T 13-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 COP00_09560 b819835a32ebb364be208d776d639620 219 Pfam PF04854 Protein of unknown function, DUF624 20 96 4.2E-30 T 13-10-2018 IPR006938 Protein of unknown function DUF624 COP00_10835 688937078cba477a54a8dbc5a31f54e9 272 Pfam PF01925 Sulfite exporter TauE/SafE 6 266 6.4E-59 T 13-10-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 COP00_22115 104c9d3473ac539e8c72ac6432519c0e 28 Pfam PF09680 Protein of unknown function (Tiny_TM_bacill) 4 26 4.8E-13 T 13-10-2018 IPR010070 Sporulation protein YjcZ-like COP00_22115 104c9d3473ac539e8c72ac6432519c0e 28 TIGRFAM TIGR01732 tiny_TM_bacill: conserved hypothetical protein 3 27 8.3E-15 T 13-10-2018 IPR010070 Sporulation protein YjcZ-like COP00_10105 8b805be1150315a62ca38f0791c504f7 160 Gene3D G3DSA:1.20.120.450 1 159 9.1E-33 T 13-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes COP00_10105 8b805be1150315a62ca38f0791c504f7 160 SUPERFAMILY SSF109854 2 159 2.14E-27 T 13-10-2018 IPR034660 DinB/YfiT-like putative metalloenzymes COP00_10105 8b805be1150315a62ca38f0791c504f7 160 Pfam PF12867 DinB superfamily 4 152 9.9E-20 T 13-10-2018 IPR024775 DinB-like domain COP00_20600 5eaa68a86159290eb8446aeed5f9c7b5 115 Pfam PF11181 Heat induced stress protein YflT 5 104 8.1E-32 T 13-10-2018 IPR025889 General stress protein 17M-like domain COP00_06270 8c3cea0c1f0e003bf7d0425de08a1ca2 112 Pfam PF08863 YolD-like protein 14 107 1.1E-27 T 13-10-2018 IPR014962 YolD-like protein COP00_06015 67b9e4b6d89e6b3627349c7b33a59ca0 298 Pfam PF06207 Protein of unknown function (DUF1002) 34 252 3.4E-78 T 13-10-2018 IPR009343 Protein of unknown function DUF1002 COP00_12150 7d133ba7d5601262d268d166902f21c6 367 Pfam PF14897 EpsG family 41 362 8.9E-52 T 13-10-2018 COP00_21160 4d0d3d7149592c3962b60e923bcd5cf6 327 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 1 177 5.8E-26 T 13-10-2018 IPR007404 LexA-binding, inner membrane-associated putative hydrolase COP00_07215 0916a724af365195638d370c10afdd20 47 Pfam PF14006 YqzL-like protein 3 45 6.3E-19 T 13-10-2018 IPR025617 YqzL-like protein COP00_07055 16d1e5fe4ab7477fddf9986536dc77be 161 Pfam PF04306 Protein of unknown function (DUF456) 21 158 5.8E-39 T 13-10-2018 IPR007403 Protein of unknown function DUF456 COP00_14530 f76f3a3f34efb5c8c9b79484307a2621 27 Pfam PF09680 Protein of unknown function (Tiny_TM_bacill) 6 26 1.3E-10 T 13-10-2018 IPR010070 Sporulation protein YjcZ-like COP00_14530 f76f3a3f34efb5c8c9b79484307a2621 27 TIGRFAM TIGR01732 tiny_TM_bacill: conserved hypothetical protein 2 26 9.3E-13 T 13-10-2018 IPR010070 Sporulation protein YjcZ-like COP00_00215 fa352774454dc480997d70bece2a2013 209 SUPERFAMILY SSF55729 4 136 1.21E-16 T 13-10-2018 IPR016181 Acyl-CoA N-acyltransferase COP00_00215 fa352774454dc480997d70bece2a2013 209 Pfam PF00583 Acetyltransferase (GNAT) family 16 136 2.2E-13 T 13-10-2018 IPR000182 GNAT domain COP00_00215 fa352774454dc480997d70bece2a2013 209 Gene3D G3DSA:3.40.630.30 2 208 4.9E-52 T 13-10-2018 COP00_10590 30e507a11c3492d3847c4fc137c910c2 1042 Gene3D G3DSA:1.20.5.340 510 612 1.5E-6 T 13-10-2018 COP00_10590 30e507a11c3492d3847c4fc137c910c2 1042 TIGRFAM TIGR03929 T7_esaA_Nterm: type VII secretion protein EsaA 11 201 6.7E-61 T 13-10-2018 IPR023838 Type VII secretion system EsaA GO:0016021 COP00_00360 6464b081bc3256a82906c691dbd5bc5f 180 Gene3D G3DSA:3.40.30.10 1 180 3.9E-73 T 13-10-2018 COP00_00360 6464b081bc3256a82906c691dbd5bc5f 180 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 164 180 1.1E-4 T 13-10-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 COP00_00360 6464b081bc3256a82906c691dbd5bc5f 180 Pfam PF00578 AhpC/TSA family 6 141 1.5E-38 T 13-10-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 COP00_00360 6464b081bc3256a82906c691dbd5bc5f 180 SUPERFAMILY SSF52833 5 179 1.12E-57 T 13-10-2018 IPR036249 Thioredoxin-like superfamily COP00_00360 6464b081bc3256a82906c691dbd5bc5f 180 PIRSF PIRSF000239 1 180 8.0E-59 T 13-10-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 COP00_06170 93e40f2e0b42af5b6ea73b202a7822ae 117 Pfam PF13564 DoxX-like family 5 104 1.8E-20 T 13-10-2018 IPR032808 DoxX family COP00_15370 8cb8eda25b835c37860f356b90007403 50 Pfam PF12669 Virus attachment protein p12 family 4 44 2.4E-8 T 13-10-2018 COP00_12940 bdf3f63c1bfd6abec8575901782c525e 119 Pfam PF04020 Mycobacterial 4 TMS phage holin, superfamily IV 2 106 8.0E-28 T 13-10-2018 IPR007165 Mycobacterial 4 TMS phage holin, superfamily IV COP00_05330 2f1dbfd73cbc920df5adc526b9edc166 89 Pfam PF10752 Protein of unknown function (DUF2533) 2 84 7.0E-40 T 13-10-2018 IPR019688 Protein of unknown function DUF2533 COP00_03665 a270e4c1eb3350f818c05eee7144a06c 47 Hamap MF_01505 Small, acid-soluble spore protein N [sspN]. 1 47 19.342 T 13-10-2018 IPR012612 Small acid-soluble spore protein, SspN GO:0030436|GO:0042601 COP00_03665 a270e4c1eb3350f818c05eee7144a06c 47 Pfam PF08177 Small acid-soluble spore protein N family 1 46 3.3E-26 T 13-10-2018 IPR012612 Small acid-soluble spore protein, SspN GO:0030436|GO:0042601 COP00_18970 83e6c6cf1bd2152555a05bf66d477bb9 255 Pfam PF12730 ABC-2 family transporter protein 4 182 1.8E-18 T 13-10-2018 IPR032688 ABC-2 family transporter protein GO:0055085 COP00_08980 4dd90918de49ac5c0ecc61ed06622d3d 139 Pfam PF03788 LrgA family 21 112 6.3E-23 T 13-10-2018 IPR005538 LrgA/CidA family GO:0016021 COP00_15955 5c8e2931a429d708e6f08f416a673578 80 Pfam PF04025 Domain of unknown function (DUF370) 3 71 2.5E-8 T 13-10-2018 IPR007169 Extracellular matrix regulatory protein A COP00_03625 9f85f240303043311de1cdd731338391 161 Pfam PF07301 Protein of unknown function (DUF1453) 5 148 2.6E-61 T 13-10-2018 IPR009916 Protein of unknown function DUF1453 COP00_03625 9f85f240303043311de1cdd731338391 161 PIRSF PIRSF021441 1 160 9.1E-71 T 13-10-2018 IPR031306 CcdC protein COP00_14945 ee026169c1bcf0ceb1299ba66f006248 252 Pfam PF12730 ABC-2 family transporter protein 9 188 1.9E-19 T 13-10-2018 IPR032688 ABC-2 family transporter protein GO:0055085 COP00_23015 ba2254746f4ee8411cddbad69ced748f 168 Pfam PF07552 Spore Coat Protein X and V domain 45 101 1.0E-17 T 13-10-2018 IPR011428 Spore coat protein X/V GO:0030435|GO:0031160 COP00_23015 ba2254746f4ee8411cddbad69ced748f 168 Pfam PF07552 Spore Coat Protein X and V domain 109 164 4.9E-17 T 13-10-2018 IPR011428 Spore coat protein X/V GO:0030435|GO:0031160 COP00_23910 29973750bb2bc1cff9e0f910d29b9241 288 Gene3D G3DSA:3.75.10.10 6 287 1.5E-80 T 13-10-2018 COP00_23910 29973750bb2bc1cff9e0f910d29b9241 288 Pfam PF02274 Amidinotransferase 26 79 8.7E-7 T 13-10-2018 COP00_23910 29973750bb2bc1cff9e0f910d29b9241 288 Pfam PF02274 Amidinotransferase 80 285 3.5E-43 T 13-10-2018 COP00_23910 29973750bb2bc1cff9e0f910d29b9241 288 SUPERFAMILY SSF55909 13 286 6.6E-81 T 13-10-2018 COP00_14070 4f7f1268b1e81a6b8f601d2fd6ad0ab4 214 Pfam PF02163 Peptidase family M50 116 181 1.0E-7 T 13-10-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889 COP00_11955 85d91fe0a122637d20668bf724abdaa3 259 ProDom PD113106 YVBI TRANSMEMBRANE MEMBRANE YEBC YBEC 1 247 3.0E-90 T 13-10-2018 COP00_09445 30123ecdcad210704950e77faf4c01d7 92 Pfam PF14165 YtzH-like protein 3 88 4.1E-36 T 13-10-2018 IPR025547 YtzH-like protein COP00_19805 dc0ecef22c77153b64d7b63f5bc86a7b 106 Pfam PF08863 YolD-like protein 2 104 6.8E-21 T 13-10-2018 IPR014962 YolD-like protein COP00_10325 ff487e8067a5f229f2e6d5f290c741de 78 Pfam PF04070 Domain of unknown function (DUF378) 3 61 4.9E-27 T 13-10-2018 IPR007211 Protein of unknown function DUF378 COP00_18460 02ecd5bdf59ac1556a02ac2f519cc6f4 127 Pfam PF16888 Domain of unknown function (DUF5082) 12 119 3.2E-13 T 13-10-2018 IPR031681 Protein of unknown function DUF5082 COP00_18460 02ecd5bdf59ac1556a02ac2f519cc6f4 127 ProDom PD338809 BH2346 YXIB BH4015 BH0976 PREFOLDIN 8 111 2.0E-37 T 13-10-2018 COP00_22285 fe751c5c7bcd07d2f8469f4d02f20961 103 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 5 96 2.1E-19 T 13-10-2018 IPR008407 Branched-chain amino acid transport, AzlD COP00_12780 d61305f50f983aaaaa60a128d80709b0 642 PIRSF PIRSF018968 1 640 3.6E-166 T 13-10-2018 IPR027022 ABC transporter permease protein, BceB-type GO:0055085 COP00_12780 d61305f50f983aaaaa60a128d80709b0 642 Pfam PF02687 FtsX-like permease family 86 181 3.0E-8 T 13-10-2018 IPR003838 ABC transporter permease protein domain GO:0016020 COP00_03810 8058f6a9cb52ae803ef912c17c26e019 79 Pfam PF09932 Uncharacterized conserved protein (DUF2164) 3 76 1.2E-23 T 13-10-2018 IPR018680 Protein of unknown function DUF2164 COP00_08260 6b763cd9a9d91f64f27f8b1ad42ed9c9 97 Pfam PF06305 Lipopolysaccharide assembly protein A domain 24 80 1.5E-16 T 13-10-2018 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 COP00_01035 d21f0a78ccfd967aa9d375ca54a26e2a 47 Pfam PF10055 Uncharacterized small protein (DUF2292) 13 46 4.9E-19 T 13-10-2018 IPR018743 Protein of unknown function DUF2292 COP00_04550 91df042e26540aedc956b244865c53ab 212 Pfam PF08795 Putative papain-like cysteine peptidase (DUF1796) 12 170 7.4E-33 T 13-10-2018 IPR014903 Protein of unknown function DUF1796 COP00_24505 5253ec6652db4fdf738acd720c60ef97 107 Pfam PF05119 Phage terminase, small subunit 17 97 2.2E-11 T 13-10-2018 IPR006448 Putative phage terminase, small subunit, P27 family COP00_12405 5253ec6652db4fdf738acd720c60ef97 107 Pfam PF05119 Phage terminase, small subunit 17 97 2.2E-11 T 13-10-2018 IPR006448 Putative phage terminase, small subunit, P27 family COP00_10530 029b878a553ee6aa7a41c4c786907abd 183 SUPERFAMILY SSF52499 2 181 3.79E-51 T 13-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 COP00_10530 029b878a553ee6aa7a41c4c786907abd 183 Pfam PF00857 Isochorismatase family 4 178 9.9E-38 T 13-10-2018 IPR000868 Isochorismatase-like GO:0003824 COP00_10530 029b878a553ee6aa7a41c4c786907abd 183 Gene3D G3DSA:3.40.50.850 1 183 2.5E-53 T 13-10-2018 IPR036380 Isochorismatase-like superfamily GO:0003824 COP00_21470 a2358ebc14adf6f955cdd354290f5fb2 204 Pfam PF13171 Protein of unknown function (DUF4004) 5 195 2.4E-75 T 13-10-2018 IPR025063 Protein of unknown function DUF4004 COP00_05290 2460622433dbe559b50ad3173933041a 88 Pfam PF10819 Protein of unknown function (DUF2564) 12 87 1.0E-28 T 13-10-2018 IPR020314 Uncharacterised protein family YpzA COP00_05290 2460622433dbe559b50ad3173933041a 88 ProDom PD062992 CYTOSOLIC YPZA BH2151 14 87 3.0E-29 T 13-10-2018 IPR020314 Uncharacterised protein family YpzA COP00_10475 b8a287c73509733c1c7fb93fc21359c6 94 PIRSF PIRSF028784 1 92 1.1E-34 T 13-10-2018 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 COP00_10475 b8a287c73509733c1c7fb93fc21359c6 94 Pfam PF04066 Multiple resistance and pH regulation protein F (MrpF / PhaF) 31 83 6.0E-20 T 13-10-2018 IPR007208 Na(+)/H(+) antiporter subunit F-like GO:0015075|GO:0016021|GO:0034220 COP00_17540 8fd22003161876c10e77de2c75ba6800 86 Pfam PF05360 yiaA/B two helix domain 12 65 1.3E-15 T 13-10-2018 IPR008024 YiaAB two helix COP00_10285 ce406e20bd1d68014cedb8bc1aedec9f 225 Pfam PF04298 Putative neutral zinc metallopeptidase 4 218 4.9E-89 T 13-10-2018 IPR007395 Putative neutral zinc metallopeptidase COP00_16050 4a354ec2c773db0f4e64aab48fc99780 310 Gene3D G3DSA:3.40.50.720 1 175 1.5E-21 T 13-10-2018 COP00_16050 4a354ec2c773db0f4e64aab48fc99780 310 SUPERFAMILY SSF51735 1 103 1.27E-11 T 13-10-2018 IPR036291 NAD(P)-binding domain superfamily COP00_16050 4a354ec2c773db0f4e64aab48fc99780 310 Pfam PF02558 Ketopantoate reductase PanE/ApbA 3 153 2.3E-14 T 13-10-2018 IPR013332 Ketopantoate reductase, N-terminal domain COP00_05910 7829ea0401a75e6f4d71f9af47af8819 391 Pfam PF01578 Cytochrome C assembly protein 72 388 5.7E-33 T 13-10-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 COP00_05910 7829ea0401a75e6f4d71f9af47af8819 391 TIGRFAM TIGR03144 cytochr_II_ccsB: cytochrome c-type biogenesis protein CcsB 48 391 8.6E-76 T 13-10-2018 IPR017562 Cytochrome c-type biogenesis protein CcsA GO:0017004 COP00_17975 6edfbcff9900ac3b3b16b7b4957eaebd 624 Pfam PF09972 Predicted membrane protein (DUF2207) 27 470 9.6E-58 T 13-10-2018 IPR018702 Protein of unknown function DUF2207, membrane COP00_03925 b2b6ab02c5a260bdda9e92a00a859958 110 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 9 105 3.8E-25 T 13-10-2018 IPR008407 Branched-chain amino acid transport, AzlD COP00_03925 b2b6ab02c5a260bdda9e92a00a859958 110 PIRSF PIRSF003203 1 110 1.6E-44 T 13-10-2018 IPR008407 Branched-chain amino acid transport, AzlD COP00_02255 c882c90da54cdb6d43c20a30680b7fb1 128 SUPERFAMILY SSF57997 7 91 5.17E-5 T 13-10-2018 COP00_10255 c0bd601b7818ec6485048e847e55a681 245 Hamap MF_00727 Protein-glutamine gamma-glutamyltransferase [tgl]. 1 245 44.248 T 13-10-2018 IPR020916 Protein-glutamine gamma-glutamyltransferase, bacteria GO:0003810 COP00_10255 c0bd601b7818ec6485048e847e55a681 245 ProDom PD119415 TRANSGLUTAMINASE TRANSFERASE ACYLTRANSFERASE GAMMA-GLUTAMYLTRANSFERASE PROTEIN-GLUTAMINE TGASE SPORULATION TGL 1 245 4.0E-115 T 13-10-2018 IPR020916 Protein-glutamine gamma-glutamyltransferase, bacteria GO:0003810 COP00_09380 21b1a7129642bfc4892b24c2be22de55 133 Pfam PF12732 YtxH-like protein 12 93 1.5E-20 T 13-10-2018 IPR024623 Uncharacterised protein family YtxH COP00_17535 2f22f7f88451ed5fa905b7c84fc26af3 167 Pfam PF07853 Protein of unknown function (DUF1648) 30 72 2.6E-15 T 13-10-2018 IPR012867 Domain of unknown function DUF1648 COP00_00105 3c10b3de09bd02281663f7597cc5609c 272 Pfam PF13730 Helix-turn-helix domain 30 84 1.1E-8 T 13-10-2018 COP00_10085 f70e8383bcfce9e874ef908ca40a16c5 331 TIGRFAM TIGR04383 acidic_w_LPXTA: processed acidic surface protein 2 329 1.6E-105 T 13-10-2018 IPR030832 Processed acidic surface protein COP00_23005 9dea10768c9cdabfbdf5aaac48d9a8fb 150 Pfam PF10612 Spore coat protein Z 7 142 2.2E-35 T 13-10-2018 IPR019593 Spore coat protein Z/Y COP00_08560 e70f8b478df50cd359dde8817c2e8b49 161 ProDom PD104119 YSXD OB2071 ORFY 1 161 3.0E-55 T 13-10-2018 COP00_17925 9414459eb18e16fe6e45ba566b6a894c 465 Pfam PF16244 Domain of unknown function (DUF4901) 8 199 7.4E-24 T 13-10-2018 IPR032599 Protein of unknown function DUF4901 COP00_05755 6caefb1babe77d84defc70e9704d0960 43 Pfam PF14140 YpzI-like protein 1 42 3.2E-23 T 13-10-2018 IPR025414 YpzI-like protein COP00_10960 b8587ede6eaa5c818c04922ab167cf65 437 Pfam PF01458 Uncharacterized protein family (UPF0051) 186 411 1.6E-64 T 13-10-2018 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 COP00_10960 b8587ede6eaa5c818c04922ab167cf65 437 SUPERFAMILY SSF101960 12 436 3.4E-121 T 13-10-2018 IPR037284 SUF system FeS cluster assembly, SufBD superfamily COP00_10960 b8587ede6eaa5c818c04922ab167cf65 437 TIGRFAM TIGR01981 sufD: FeS assembly protein SufD 152 428 2.2E-76 T 13-10-2018 IPR011542 SUF system FeS cluster assembly, SufD GO:0016226 COP00_04900 a90d9f94e16edd9fd8d496aa3b57a5ec 323 Gene3D G3DSA:1.20.1530.20 1 307 1.7E-116 T 13-10-2018 IPR038770 Sodium/solute symporter superfamily COP00_04900 a90d9f94e16edd9fd8d496aa3b57a5ec 323 TIGRFAM TIGR00841 bass: bile acid transporter 8 315 1.3E-104 T 13-10-2018 IPR004710 Bile acid:sodium symporter COP00_04900 a90d9f94e16edd9fd8d496aa3b57a5ec 323 Pfam PF01758 Sodium Bile acid symporter family 41 220 1.9E-49 T 13-10-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 COP00_18805 853f3d39fd5b6a0ccaf2ae0362342508 313 Gene3D G3DSA:1.10.260.150 65 313 1.9E-77 T 13-10-2018 COP00_18805 853f3d39fd5b6a0ccaf2ae0362342508 313 TIGRFAM TIGR00350 lytR_cpsA_psr: cell envelope-related function transcriptional attenuator common domain 86 227 1.5E-33 T 13-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain COP00_18805 853f3d39fd5b6a0ccaf2ae0362342508 313 Pfam PF03816 Cell envelope-related transcriptional attenuator domain 86 228 1.2E-48 T 13-10-2018 IPR004474 Cell envelope-related transcriptional attenuator domain COP00_06770 fe8273628fb2cf6914400c582bcf7bed 107 Gene3D G3DSA:3.10.450.390 23 107 1.9E-26 T 13-10-2018 COP00_06770 fe8273628fb2cf6914400c582bcf7bed 107 Pfam PF13028 Protein of unknown function (DUF3889) 20 104 1.7E-30 T 13-10-2018 IPR024987 Protein of unknown function DUF3889 COP00_20170 8bf3bbd2a96e419e0f9c5f1939e11a8e 257 ProDom PD113106 YVBI TRANSMEMBRANE MEMBRANE YEBC YBEC 60 233 1.0E-68 T 13-10-2018 COP00_05165 ddf5cc33677b7cdd60b7a87e490ea1c6 187 Pfam PF09911 Uncharacterized protein conserved in bacteria (DUF2140) 3 183 5.0E-59 T 13-10-2018 IPR018672 Protein of unknown function DUF2140 COP00_14200 9252b05cf7ec8f4bdca5d957cec2d83f 123 Pfam PF04241 Protein of unknown function (DUF423) 18 105 2.6E-32 T 13-10-2018 IPR006696 Protein of unknown function DUF423 COP00_10420 6511adb2e92e2f72acce39bf6f1b7a2a 319 Pfam PF02653 Branched-chain amino acid transport system / permease component 13 296 2.6E-37 T 13-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 COP00_21535 d789d71a76663668e58dc1fd831d424b 313 Pfam PF12679 ABC-2 family transporter protein 2 311 2.3E-15 T 13-10-2018 IPR032688 ABC-2 family transporter protein GO:0055085 COP00_16105 405d3dc7ff9fdfc82d42aba80db3dd01 74 Pfam PF10704 Protein of unknown function (DUF2508) 4 69 5.7E-24 T 13-10-2018 IPR019644 Protein of unknown function DUF2508 COP00_18795 c91489c9570ff42352a539ad080a7521 140 SUPERFAMILY SSF50475 4 133 2.43E-29 T 13-10-2018 COP00_18795 c91489c9570ff42352a539ad080a7521 140 Pfam PF16242 Pyridoxamine 5'-phosphate oxidase like 8 125 1.7E-16 T 13-10-2018 IPR038725 General stress protein, FMN-binding split barrel domain COP00_18795 c91489c9570ff42352a539ad080a7521 140 Gene3D G3DSA:2.30.110.10 2 130 4.6E-38 T 13-10-2018 IPR012349 FMN-binding split barrel GO:0048037 COP00_06875 64eac607d086f5c8e39d2f48de89330f 66 Pfam PF01471 Putative peptidoglycan binding domain 14 64 3.6E-14 T 13-10-2018 IPR002477 Peptidoglycan binding-like COP00_06875 64eac607d086f5c8e39d2f48de89330f 66 SUPERFAMILY SSF47090 3 65 1.07E-18 T 13-10-2018 IPR036365 PGBD-like superfamily COP00_06875 64eac607d086f5c8e39d2f48de89330f 66 Gene3D G3DSA:1.10.101.10 2 66 2.0E-20 T 13-10-2018 IPR036366 PGBD superfamily Reactome: R-HSA-1442490|Reactome: R-HSA-1474228 COP00_06765 c57a6dcd6042242d6fd519430062f125 241 TIGRFAM TIGR04087 YqxM_for_SipW: YqxM protein 3 188 3.5E-67 T 13-10-2018 IPR023848 TasA anchoring/assembly protein GO:0062039 COP00_05035 ae0099acd213723a8736e08952e372b7 333 Pfam PF03773 Predicted permease 43 329 1.8E-71 T 13-10-2018 IPR005524 Predicted permease DUF318 COP00_05865 274691445f93458044c7afaa05b4bdcd 374 ProDom PD136539 TRANSCRIPTION SIGMA-X NEGATIVE ACTIVITY RSIX REPRESSOR MEMBRANE EFFECTOR REGULATION REGULATOR 1 368 1.0E-114 T 13-10-2018 COP00_13700 2f639a76caf006e2967b9ff1776526fc 286 Gene3D G3DSA:3.40.50.1820 18 282 3.5E-75 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold COP00_13700 2f639a76caf006e2967b9ff1776526fc 286 SUPERFAMILY SSF53474 15 279 9.35E-58 T 13-10-2018 IPR029058 Alpha/Beta hydrolase fold COP00_13700 2f639a76caf006e2967b9ff1776526fc 286 Pfam PF00756 Putative esterase 32 260 3.6E-19 T 13-10-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 COP00_16140 d0f57182e885aa34bf7989ff561bee72 63 Pfam PF10764 Inhibitor of sigma-G Gin 10 54 1.3E-19 T 13-10-2018 IPR019700 Anti-sigma-G factor Gin COP00_20300 60276afb10521bfe23be2c6c8587165f 68 Pfam PF13131 Protein of unknown function (DUF3951) 10 50 1.9E-14 T 13-10-2018 IPR025028 Protein of unknown function DUF3951 COP00_13110 ec13eb6e9564de3b8637bc7835697560 139 TIGRFAM TIGR03826 YvyF: flagellar operon protein TIGR03826 2 138 3.9E-56 T 13-10-2018 IPR022258 Flagellar operon protein YvyF COP00_00575 df166bda9aac90497562df60b5499f98 39 Pfam PF13790 SR1 protein 1 37 4.6E-21 T 13-10-2018 IPR025236 SR1 protein COP00_22755 0ff8cc282106c607334ecc1cd97241ff 59 Pfam PF14168 YjzC-like protein 1 55 3.4E-28 T 13-10-2018 IPR025549 YjzC-like protein COP00_10185 3ad6da648a12ffd77ed1dd328d48dbd1 118 Pfam PF06013 Proteins of 100 residues with WXG 24 104 1.7E-7 T 13-10-2018 IPR010310 Type VII secretion system ESAT-6-like COP00_19515 652b1c8ee21ab7cf197aafd891df5e80 244 Pfam PF02517 CAAX protease self-immunity 128 214 1.4E-15 T 13-10-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 COP00_19025 a7dbf5137c623ae50d8059ff89c195a5 159 Pfam PF03703 Bacterial PH domain 73 148 6.3E-18 T 13-10-2018 IPR005182 Domain of unknown function DUF304 COP00_19875 3fc94fe49ff8098e6082b0cf376c3cbf 68 Pfam PF07870 Protein of unknown function (DUF1657) 7 55 1.6E-24 T 13-10-2018 IPR012452 Protein of unknown function DUF1657 COP00_05120 5dad273bdf759dca6f14485374ed9cd5 44 TIGRFAM TIGR01732 tiny_TM_bacill: conserved hypothetical protein 18 43 9.4E-9 T 13-10-2018 IPR010070 Sporulation protein YjcZ-like COP00_05120 5dad273bdf759dca6f14485374ed9cd5 44 Pfam PF09680 Protein of unknown function (Tiny_TM_bacill) 20 43 1.3E-11 T 13-10-2018 IPR010070 Sporulation protein YjcZ-like COP00_11185 ff1dfaf17af5ff5b74528d17543d9de7 227 Pfam PF04012 PspA/IM30 family 2 213 4.3E-55 T 13-10-2018 IPR007157 PspA/IM30 COP00_04635 8c16b6047115aa5bb997c85cec394855 131 Pfam PF14112 Immunity protein 22 7 130 1.4E-24 T 13-10-2018 IPR025560 Immunity protein 22 COP00_12315 afcf46f31bac9e12a3199a2984726bc0 87 Pfam PF10779 Haemolysin XhlA 15 82 8.3E-13 T 13-10-2018 IPR019715 Haemolysin XhlA COP00_12180 2487d96134982deda3ad529bb5f96ede 250 Pfam PF02706 Chain length determinant protein 3 94 2.5E-19 T 13-10-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 COP00_09270 a835cb609bc91225077a7b95b9de340a 445 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 14 419 5.3E-154 T 13-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 COP00_09270 a835cb609bc91225077a7b95b9de340a 445 Pfam PF05525 Branched-chain amino acid transport protein 7 431 2.4E-163 T 13-10-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 COP00_18990 8a4906125eefdc6efefe5e71195dcd30 53 Pfam PF13076 Fur-regulated basic protein A 4 39 1.6E-14 T 13-10-2018 IPR025072 Fur-regulated basic protein A COP00_03280 593afb566a9ea6b9b42f84d0a7c56c28 142 Pfam PF01391 Collagen triple helix repeat (20 copies) 43 85 3.9E-9 T 13-10-2018 IPR008160 Collagen triple helix repeat COP00_03280 593afb566a9ea6b9b42f84d0a7c56c28 142 Gene3D G3DSA:1.20.5.320 58 107 9.3E-6 T 13-10-2018 COP00_23525 9e8b0759a3af6e2e57ac7fa037fb0982 138 Pfam PF15601 Immunity protein 70 5 135 3.0E-55 T 13-10-2018 IPR028185 Immunity protein 70 COP00_18920 9fa1d21fe33a19f8fc4efd2f8e199ca0 430 Pfam PF03553 Na+/H+ antiporter family 238 421 1.4E-10 T 13-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 COP00_18920 9fa1d21fe33a19f8fc4efd2f8e199ca0 430 Pfam PF03553 Na+/H+ antiporter family 57 211 4.6E-13 T 13-10-2018 IPR018461 Na+/H+ antiporter, NhaC-like, C-terminal GO:0016021 COP00_04775 bfe73bc5e2272099ca03ee77df82eff8 151 Pfam PF10710 Protein of unknown function (DUF2512) 1 138 3.2E-48 T 13-10-2018 IPR019649 Protein of unknown function DUF2512 COP00_02165 65492ce644e32e3f0fba2c92143f6c27 144 Pfam PF10002 Predicted membrane protein (DUF2243) 11 140 3.0E-41 T 13-10-2018 IPR018719 Protein of unknown function DUF2243, membrane COP00_02505 471ded3bbdac805ccc371514d548da2c 171 Gene3D G3DSA:1.20.1260.50 2 163 7.3E-7 T 13-10-2018 COP00_17130 3b1994cdd14784c191c9bc376bad6b95 246 PIRSF PIRSF006648 2 243 1.4E-15 T 13-10-2018 IPR000412 ABC-2 transporter GO:0016021|GO:0043190|GO:0055085 COP00_17130 3b1994cdd14784c191c9bc376bad6b95 246 Pfam PF01061 ABC-2 type transporter 5 206 1.7E-20 T 13-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 COP00_06205 212917931d40808d791a3a5678a41879 76 Pfam PF13025 Protein of unknown function (DUF3886) 10 74 9.6E-22 T 13-10-2018 IPR024980 Protein of unknown function DUF3886 COP00_19735 ce48229cc6233118d438be963bff33a9 205 Pfam PF04630 Phage tail tube protein 43 185 7.1E-10 T 13-10-2018 IPR006724 Phage tail tube protein 1 COP00_19735 ce48229cc6233118d438be963bff33a9 205 TIGRFAM TIGR01603 maj_tail_phi13: phage major tail protein, phi13 family 8 185 8.1E-42 T 13-10-2018 IPR006490 Phage major tail protein, phi13 family COP00_00640 1d0b177901dee52844ae8df4bc41727b 68 Pfam PF09963 Uncharacterized protein conserved in bacteria (DUF2197) 2 56 9.7E-30 T 13-10-2018 IPR019241 Protein of unknown function DUF2197 COP00_22595 6356434b71822fe87f08ace61fd865df 491 PIRSF PIRSF005690 12 491 1.6E-144 T 13-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 COP00_22595 6356434b71822fe87f08ace61fd865df 491 Pfam PF03323 Bacillus/Clostridium GerA spore germination protein 24 477 4.1E-150 T 13-10-2018 IPR004995 Bacillus/Clostridium Ger spore germination protein GO:0009847|GO:0016021 COP00_05935 b13c4644d6164155e5ee2123c46972f4 195 Pfam PF07670 Nucleoside recognition 43 150 1.3E-9 T 13-10-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 COP00_15995 bb0f19f734fadc2717fa143e588eac97 325 Pfam PF14175 YaaC-like Protein 9 310 3.8E-110 T 13-10-2018 IPR026988 YaaC-like protein COP00_15755 29bf80dc895b97aa28b28b12204ac0ab 88 Pfam PF06946 Bacteriophage A118-like holin, Hol118 5 84 9.8E-11 T 13-10-2018 IPR009708 Bacteriophage A118, holin COP00_23315 b653b4f7aaaf1b5950e29f9c3d2f4d34 89 ProDom PD061343 YQAH DNA SEQUENCE 1 86 1.0E-34 T 13-10-2018 IPR020278 Uncharacterized protein YqaH COP00_23315 b653b4f7aaaf1b5950e29f9c3d2f4d34 89 Pfam PF17448 Uncharacterized protein YqaH 1 88 2.0E-45 T 13-10-2018 IPR020278 Uncharacterized protein YqaH COP00_01065 fae821455e8bc517ea378a29d520d99e 261 SUPERFAMILY SSF53800 2 241 1.31E-50 T 13-10-2018 COP00_01065 fae821455e8bc517ea378a29d520d99e 261 Pfam PF01903 CbiX 10 113 5.9E-27 T 13-10-2018 IPR002762 Cobalamin (vitamin B12) biosynthesis CbiX GO:0009236|GO:0016852 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377 COP00_01065 fae821455e8bc517ea378a29d520d99e 261 Pfam PF01903 CbiX 134 234 8.9E-24 T 13-10-2018 IPR002762 Cobalamin (vitamin B12) biosynthesis CbiX GO:0009236|GO:0016852 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377 COP00_01065 fae821455e8bc517ea378a29d520d99e 261 Gene3D G3DSA:3.40.50.1400 1 121 1.7E-26 T 13-10-2018 COP00_01065 fae821455e8bc517ea378a29d520d99e 261 Gene3D G3DSA:3.40.50.1400 124 246 6.2E-20 T 13-10-2018 COP00_18250 7160bb2e61d356d5a36b6689c98eeedd 658 Pfam PF02538 Hydantoinase B/oxoprolinase 4 530 5.7E-148 T 13-10-2018 IPR003692 Hydantoinase B/oxoprolinase GO:0003824 Reactome: R-HSA-174403|Reactome: R-HSA-5578998 COP00_05160 47562398d0a3bc06a7f2b3e5648f6b68 63 ProDom PD054146 YPMT TRANSMEMBRANE MEMBRANE 29 62 2.0E-11 T 13-10-2018 IPR035403 Uncharacterized protein YmpT COP00_05160 47562398d0a3bc06a7f2b3e5648f6b68 63 Pfam PF17431 Uncharacterized ympT 1 62 8.0E-31 T 13-10-2018 IPR035403 Uncharacterized protein YmpT COP00_18930 7189e77706358420e76e365d28121a35 125 Pfam PF10685 Stress-induced bacterial acidophilic repeat motif 65 81 1.5E-6 T 13-10-2018 IPR019626 Stress-induced protein, KGG, repeat COP00_18930 7189e77706358420e76e365d28121a35 125 Pfam PF10685 Stress-induced bacterial acidophilic repeat motif 86 102 1.6E-5 T 13-10-2018 IPR019626 Stress-induced protein, KGG, repeat COP00_18930 7189e77706358420e76e365d28121a35 125 Pfam PF10685 Stress-induced bacterial acidophilic repeat motif 105 121 1.3E-5 T 13-10-2018 IPR019626 Stress-induced protein, KGG, repeat COP00_18930 7189e77706358420e76e365d28121a35 125 Pfam PF10685 Stress-induced bacterial acidophilic repeat motif 25 42 7.2E-6 T 13-10-2018 IPR019626 Stress-induced protein, KGG, repeat COP00_18930 7189e77706358420e76e365d28121a35 125 Pfam PF10685 Stress-induced bacterial acidophilic repeat motif 45 62 1.8E-6 T 13-10-2018 IPR019626 Stress-induced protein, KGG, repeat COP00_20930 c899d562a5877c5676b7e06105833144 238 ProDom PD313455 YFJL PSPB19' PRECURSOR TRANSPORTER SIGNAL 3 236 7.0E-74 T 13-10-2018 IPR020523 Uncharacterised protein family, YfjL COP00_13215 608ae260aa75c815c3a1679fe603dc4e 105 Pfam PF11518 Protein of unknown function (DUF3221) 11 91 1.7E-4 T 13-10-2018 IPR021598 Protein of unknown function DUF3221 COP00_10460 4a92ba580488f558c48e73f1fea75070 113 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 5 107 2.1E-30 T 13-10-2018 IPR039428 NADH-ubiquinone oxidoreductase chain 4L/Mnh complex subunit C1-like COP00_14285 1f71d321650bd708c4120fe8662c96c3 394 Pfam PF01098 Cell cycle protein 10 384 7.1E-101 T 13-10-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 COP00_14285 1f71d321650bd708c4120fe8662c96c3 394 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 343 367 - T 13-10-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0016021 KEGG: 00550+2.4.1.129|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 COP00_22590 32ceb2aa7d429d491e66e07145cf55f1 372 Pfam PF03845 Spore germination protein 44 314 1.1E-17 T 13-10-2018 IPR004761 Spore germination GerAB GO:0009847|GO:0016021 COP00_02675 e18a9cc187c19b3a6a1bca349d8dde83 282 Pfam PF14022 Protein of unknown function (DUF4238) 7 275 6.6E-29 T 13-10-2018 IPR025332 Protein of unknown function DUF4238 COP00_03615 80e6d930834f6653849a240d675585ea 235 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 9 214 1.4E-65 T 13-10-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 COP00_16970 768bfc97f349ad7e2304768870b66490 150 Pfam PF04463 Protein of unknown function (DUF523) 2 145 1.5E-43 T 13-10-2018 IPR007553 Domain of unknown function DUF523 COP00_21150 dbe183a66b31464c2fd50fa16b9b0a58 133 Pfam PF04138 GtrA-like protein 14 122 6.8E-19 T 13-10-2018 IPR007267 GtrA-like protein GO:0000271|GO:0016021 COP00_05185 d05c60028b4aa1cd413bb5beea2e7085 83 Pfam PF10751 Protein of unknown function (DUF2535) 1 83 1.5E-40 T 13-10-2018 IPR019687 Protein of unknown function DUF2535 COP00_06045 1477148fe820d009631e55b4722f4e58 200 Pfam PF14097 Stage V sporulation protein AE1 6 185 1.5E-81 T 13-10-2018 IPR025914 Stage V sporulation protein AE COP00_10180 1ba3a8fc280735f6b7d6642e6a09ccc6 235 Pfam PF16887 Domain of unknown function (DUF5081) 4 228 3.5E-60 T 13-10-2018 IPR031682 Protein of unknown function DUF5081 COP00_03510 45e7a62cfe46f2fa098828d1e36245c5 65 Pfam PF13783 Domain of unknown function (DUF4177) 3 59 3.0E-17 T 13-10-2018 IPR025234 Protein of unknown function DUF4177 COP00_23180 bb503b48c91cf5dc49a1c5fd52173ada 68 Pfam PF07870 Protein of unknown function (DUF1657) 7 55 3.4E-23 T 13-10-2018 IPR012452 Protein of unknown function DUF1657 COP00_00610 6889b9768b92793ab3eff4ce252ab985 99 Pfam PF13490 Putative zinc-finger 6 36 1.0E-7 T 13-10-2018 IPR027383 Putative zinc-finger COP00_12130 10503319a77cc0bf561adc65b59f99d1 515 Pfam PF01943 Polysaccharide biosynthesis protein 12 287 1.3E-9 T 13-10-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 COP00_00070 e07b92c6cc0c3aa1d7ee76aad907f468 454 Pfam PF10651 Domain of unknown function (DUF2479) 7 148 2.6E-33 T 13-10-2018 IPR018913 Domain of unknown function DUF2479 COP00_19870 e6b6495ce31dfd8928c1829438da6c5b 106 Pfam PF08863 YolD-like protein 2 104 4.6E-20 T 13-10-2018 IPR014962 YolD-like protein COP00_24065 92a8e7f0f4795e013dc78576f292ba37 363 Pfam PF12791 Anti-sigma factor N-terminus 7 59 9.0E-15 T 13-10-2018 IPR024449 Anti-sigma factor RsgI, N-terminal COP00_20180 b5ac397c3912b5196f2da31dd4771da4 65 Pfam PF14044 NETI protein 8 63 2.1E-28 T 13-10-2018 IPR025930 NETI protein COP00_18490 0caed62c48f18effbf14d7c39e663ee8 403 Pfam PF02653 Branched-chain amino acid transport system / permease component 57 392 4.5E-46 T 13-10-2018 IPR001851 ABC transporter, permease GO:0016020|GO:0022857|GO:0055085 COP00_05000 424a2524d5b68829656f03ed3c26d40b 67 Pfam PF11755 Protein of unknown function (DUF3311) 9 63 5.5E-18 T 13-10-2018 IPR021741 Protein of unknown function DUF3311 COP00_04180 70d92128822e9c6a422bfc011ed471e2 140 Pfam PF07849 Protein of unknown function (DUF1641) 100 121 1.8E-5 T 13-10-2018 IPR012440 Protein of unknown function DUF1641 COP00_18110 6032c1b512d1edfa020898753bf9b0bf 256 Pfam PF10127 Predicted nucleotidyltransferase 2 248 3.6E-94 T 13-10-2018 IPR018775 Nucleotidyltransferase, predicted COP00_23360 c08cf334611dc9fc2f34b3138fbe8409 56 Pfam PF13076 Fur-regulated basic protein A 13 48 2.0E-11 T 13-10-2018 IPR025072 Fur-regulated basic protein A COP00_22250 73ba814be5e185f2b990d1e5efd21d82 44 Pfam PF14149 YhfH-like protein 3 38 2.0E-19 T 13-10-2018 IPR025432 YhfH-like protein COP00_06610 933a92a24336fe741ade007c2e09570d 127 Pfam PF03780 Asp23 family, cell envelope-related function 8 113 1.4E-35 T 13-10-2018 IPR005531 Alkaline shock protein Asp23 COP00_23030 adb328d701109a7148454a026bb41d65 137 Pfam PF07098 Protein of unknown function (DUF1360) 30 132 1.0E-36 T 13-10-2018 IPR010773 Mycobacterium phage PG1, Gp7 COP00_08890 14dcf502201721bc8a0cc4e2bd92092f 483 Pfam PF03703 Bacterial PH domain 261 331 3.6E-4 T 13-10-2018 IPR005182 Domain of unknown function DUF304 COP00_08890 14dcf502201721bc8a0cc4e2bd92092f 483 Pfam PF03703 Bacterial PH domain 74 150 9.7E-12 T 13-10-2018 IPR005182 Domain of unknown function DUF304 COP00_08890 14dcf502201721bc8a0cc4e2bd92092f 483 Pfam PF03703 Bacterial PH domain 397 474 2.9E-11 T 13-10-2018 IPR005182 Domain of unknown function DUF304 COP00_08890 14dcf502201721bc8a0cc4e2bd92092f 483 PIRSF PIRSF026631 6 483 2.7E-77 T 13-10-2018 IPR014529 Uncharacterised conserved protein UCP026631 COP00_14430 1af8affe8551a70ad74c315a964b0047 128 Pfam PF03788 LrgA family 21 110 3.3E-26 T 13-10-2018 IPR005538 LrgA/CidA family GO:0016021 COP00_06110 8fb240742441180f1b60a1ff9a45f169 74 Pfam PF14004 Protein of unknown function (DUF4227) 5 74 2.5E-32 T 13-10-2018 IPR025321 Protein of unknown function DUF4227 COP00_14105 4ee195abe8e05288b40f49b4b5e8ca52 106 Pfam PF14154 Domain of unknown function (DUF4306) 8 92 3.7E-33 T 13-10-2018 IPR025440 Protein of unknown function DUF4306 COP00_17330 5018d6b2fdf3aec3bd6064e9c362f7f5 123 Pfam PF14729 Domain of unknown function with cystatin-like fold (DUF4467) 24 116 1.4E-16 T 13-10-2018 IPR028075 Domain of unknown function with cystatin-like fold DUF4467 COP00_17125 517f916279499d4ec56a0acb3bad9d8d 329 Pfam PF01061 ABC-2 type transporter 130 287 3.4E-11 T 13-10-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 COP00_06335 506db2c59ab3f560e1f4a1523bf83392 168 Pfam PF11385 Protein of unknown function (DUF3189) 3 150 1.7E-49 T 13-10-2018 IPR021525 Protein of unknown function DUF3189 COP00_23600 42b9e315a1e6826d0a0d79afabdac223 220 Pfam PF06114 IrrE N-terminal-like domain 35 147 3.8E-16 T 13-10-2018 IPR010359 IrrE N-terminal-like domain COP00_01495 2fc0ad590ca0dc43a3b0942e7b5175b5 178 ProDom PD177368 TRANSCRIPTION DNA-BINDING MOTILITY SWRB SWARMING YLXL REGULATION BH2428 1 173 8.0E-55 T 13-10-2018 COP00_12110 7501a50089e6e457f8b8dd724fff9499 321 Pfam PF04230 Polysaccharide pyruvyl transferase 37 289 2.8E-24 T 13-10-2018 IPR007345 Polysaccharide pyruvyl transferase COP00_07555 ab83df2296f5871eb744ec173c8eff97 80 Pfam PF10676 Spore germination protein gerPA/gerPF 1 71 2.2E-20 T 13-10-2018 IPR019618 Spore germination protein GerPA/GerPF COP00_09015 12c0024d07c523aa106cfcdcf3399722 210 Pfam PF09335 SNARE associated Golgi protein 61 174 9.6E-20 T 13-10-2018 IPR032816 SNARE associated Golgi protein COP00_05155 0363843e565133bb48914acec3ab1621 287 Pfam PF14344 Domain of unknown function (DUF4397) 99 212 5.9E-18 T 13-10-2018 IPR025510 Domain of unknown function DUF4397 COP00_24105 f3a8f0cde3a2c7cc74049e352aa6062b 338 Pfam PF01757 Acyltransferase family 7 307 7.2E-23 T 13-10-2018 IPR002656 Acyltransferase 3 GO:0016747 COP00_17055 22ddc1cca5f2e66d2656d2ad93765d73 100 Gene3D G3DSA:3.40.50.10490 12 95 2.2E-7 T 13-10-2018